RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CHRM3 (Homo sapiens)

Ensembl gene IDs: ENSG00000133019

Ensembl transcript IDs: ENST00000255380.8, ENST00000448020.1, ENST00000468573.5, ENST00000481779.1, ENST00000487470.1, ENST00000492335.5, ENST00000615928.5, ENST00000674678.1, ENST00000675184.1, ENST00000675709.1, ENST00000676153.1, ENST00000676433.1

Found 986 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGGAGGTTGCTTAACACCAAGTCTGGCGAAGCCACGGCGCTCAGCTaGCTCACGAGCCTGTCCGCTCTGCACAGACCTGCTGGGAAGGCC +
Preference number: 1 (lower is better)
Translates to: RRLLNTKSGEATALS*LTSLSALHRPAGKA
Trigger: GGCCTTCCCAGCAGGTCTGTGCAGAGCGGACAGGCTCGTGAGTCAGCTGAGCGCCGTGGCTTCGCCAGACTTGGTGTTAAGCAACCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR GCA 90 bp CACGGCGCTCAGCTGACTCACGAGCCTGTCCGCTCTGCACAGACCTaGTGGGAAGGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTT +
Preference number: 1 (lower is better)
Translates to: HGAQLTHEPVRSAQT*WEGLAALCGKQPWF
Trigger: AAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCCTTCCCAGCAGGTCTGTGCAGAGCGGACAGGCTCGTGAGTCAGCTGAGCGCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR GCA 90 bp GTGCTCCAGCTTCTCTCTCGATACATGAAGGGGCTTCCAGCGCTCTaGAGAGCAATGAGCCCTGCACGAGGGCAACGTAGGAAGCCTGAC +
Preference number: 1 (lower is better)
Translates to: VLQLLSRYMKGLPAL*RAMSPARGQRRKPD
Trigger: GTCAGGCTTCCTACGTTGCCCTCGTGCAGGGCTCATTGCTCTGCAGAGCGCTGGAAGCCCCTTCATGTATCGAGAGAGAAGCTGGAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR GCA 90 bp TCACGAGCCTGTCCGCTCTGCACAGACCTGCTGGGAAGGCCTGGCTaGTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACACTGG +
Preference number: 1 (lower is better)
Translates to: SRACPLCTDLLGRPG*SLWKTALVSKTLHW
Trigger: CCAGTGTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCCTTCCCAGCAGGTCTGTGCAGAGCGGACAGGCTCGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR GCA 90 bp GAATACAAAAGCAGCTTCTACCCAGCTCTGGGTTCACAACACGAATaGCCTGTACAAAGGGAAGATATCTCCGCGGCCCTCCCACCTCCC +
Preference number: 1 (lower is better)
Translates to: EYKSSFYPALGSQHE*PVQREDISAALPPP
Trigger: GGGAGGTGGGAGGGCCGCGGAGATATCTTCCCTTTGTACAGGGCATTCGTGTTGTGAACCCAGAGCTGGGTAGAAGCTGCTTTTGTATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR TCA 90 bp AGACTTCTCCGCTGTGACAGAGCCTTGGCATCCTTCTTTCCTCCCTaGGTCAGAGCTGAAACAGCCAACTGTGCATCAGAGCTCTGTGCT +
Preference number: 1 (lower is better)
Translates to: RLLRCDRALASFFPP*VRAETANCASELCA
Trigger: AGCACAGAGCTCTGATGCACAGTTGGCTGTTTCAGCTCTGACTCAGGGAGGAAAGAAGGATGCCAAGGCTCTGTCACAGCGGAGAAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR CCA 90 bp TGTCCGCTCTGCACAGACCTGCTGGGAAGGCCTGGCTGCTCTCTGTaGAAAACAGCCCTGGTTTCAAAAACATTACACTGGGCTTATTTC +
Preference number: 1 (lower is better)
Translates to: CPLCTDLLGRPGCSL*KTALVSKTLHWAYF
Trigger: GAAATAAGCCCAGTGTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCCTTCCCAGCAGGTCTGTGCAGAGCGGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR CCA 90 bp CTCTGTGCCACTCTGGTATTAGACTTCTCCGCTGTGACAGAGCCTTaGCATCCTTCTTTCCTCCCTGAGTCAGAGCTGAAACAGCCAACT +
Preference number: 1 (lower is better)
Translates to: LCATLVLDFSAVTEP*HPSFLPESELKQPT
Trigger: AGTTGGCTGTTTCAGCTCTGACTCAGGGAGGAAAGAAGGATGCCAAGGCTCTGTCACAGCGGAGAAGTCTAATACCAGAGTGGCACAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR CCA 90 bp CTGCAGTGTTCCACTTGGGGTCTGGATTCCCACTTTTGGGATCCTTaGGAAGAATGTGGGAACTGGGTCAGCTATGCTCATCTGAGATTC +
Preference number: 1 (lower is better)
Translates to: LQCSTWGLDSHFWDP*EECGNWVSYAHLRF
Trigger: GAATCTCAGATGAGCATAGCTGACCCAGTTCCCACATTCTTCCCAAGGATCCCAAAAGTGGGAATCCAGACCCCAAGTGGAACACTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR CCA 90 bp TTCGTAAGCCTGCAGTGTTCCACTTGGGGTCTGGATTCCCACTTTTaGGATCCTTGGGAAGAATGTGGGAACTGGGTCAGCTATGCTCAT +
Preference number: 1 (lower is better)
Translates to: FVSLQCSTWGLDSHF*DPWEECGNWVSYAH
Trigger: ATGAGCATAGCTGACCCAGTTCCCACATTCTTCCCAAGGATCCCAAAAGTGGGAATCCAGACCCCAAGTGGAACACTGCAGGCTTACGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR TCA 90 bp GGCAATGCCTGGAGAATGGAGATTGAGTGTGTGTGTGTGTGCTTGTaGGAGAGAGAGAAGGAAGAAGAGGGAGAAAGAGAGAGAGAGAGG +
Preference number: 1 (lower is better)
Translates to: GNAWRMEIECVCVCL*EREKEEEGERERER
Trigger: CCTCTCTCTCTCTCTTTCTCCCTCTTCTTCCTTCTCTCTCTCTCACAAGCACACACACACACACTCAATCTCCATTCTCCAGGCATTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR CCA 90 bp CAGAGAGAGCTCACTTCTCCTAACCATCTGGCAATGCCTGGAGAATaGAGATTGAGTGTGTGTGTGTGTGCTTGTGAGAGAGAGAGAAGG +
Preference number: 1 (lower is better)
Translates to: QRELTSPNHLAMPGE*RLSVCVCACERERR
Trigger: CCTTCTCTCTCTCTCACAAGCACACACACACACACTCAATCTCCATTCTCCAGGCATTGCCAGATGGTTAGGAGAAGTGAGCTCTCTCTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR TCA 90 bp AACTGTGGCCATCACATAGCTCTAAGCAGACGCCCAGAGGAAGTTTaGAGTGTTACATGTAGGAGGCTGGAAATGCCCATGTACTGGATG +
Preference number: 1 (lower is better)
Translates to: NCGHHIALSRRPEEV*SVTCRRLEMPMYWM
Trigger: CATCCAGTACATGGGCATTTCCAGCCTCCTACATGTAACACTTCAAACTTCCTCTGGGCGTCTGCTTAGAGCTATGTGATGGCCACAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR CCA 90 bp CACTTGGGGTCTGGATTCCCACTTTTGGGATCCTTGGGAAGAATGTaGGAACTGGGTCAGCTATGCTCATCTGAGATTCCAAAGCTAATG +
Preference number: 1 (lower is better)
Translates to: HLGSGFPLLGSLGRM*ELGQLCSSEIPKLM
Trigger: CATTAGCTTTGGAATCTCAGATGAGCATAGCTGACCCAGTTCCCACATTCTTCCCAAGGATCCCAAAAGTGGGAATCCAGACCCCAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR TCA 90 bp AGCTCACTTCTCCTAACCATCTGGCAATGCCTGGAGAATGGAGATTaGGTGTGTGTGTGTGTGCTTGTGAGAGAGAGAGAAGGAAGAAGA +
Preference number: 1 (lower is better)
Translates to: SSLLLTIWQCLENGD*VCVCVLVREREGRR
Trigger: TCTTCTTCCTTCTCTCTCTCTCACAAGCACACACACACACACTCAATCTCCATTCTCCAGGCATTGCCAGATGGTTAGGAGAAGTGAGCT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR GCA 90 bp CCACTTTTGGGATCCTTGGGAAGAATGTGGGAACTGGGTCAGCTATaGTCATCTGAGATTCCAAAGCTAATGGGAATTAAAGGACCCAGG +
Preference number: 1 (lower is better)
Translates to: PLLGSLGRMWELGQL*SSEIPKLMGIKGPR
Trigger: CCTGGGTCCTTTAATTCCCATTAGCTTTGGAATCTCAGATGAGCATAGCTGACCCAGTTCCCACATTCTTCCCAAGGATCCCAAAAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR CCA 90 bp AAACACCACCTCACACTGAATACAAAAGCAGCTTCTACCCAGCTCTaGGTTCACAACACGAATGCCCTGTACAAAGGGAAGATATCTCCG +
Preference number: 1 (lower is better)
Translates to: KHHLTLNTKAASTQL*VHNTNALYKGKISP
Trigger: CGGAGATATCTTCCCTTTGTACAGGGCATTCGTGTTGTGAACCCAGAGCTGGGTAGAAGCTGCTTTTGTATTCAGTGTGAGGTGGTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR CCA 90 bp AGCCCAGACCAGAGTGGTAGGGTCAGAACTTTGTGTGAGTCTCTGTaGTTCTACCAGAACAAACATAGGCCTGATATTCTAGCAACGCAT +
Preference number: 1 (lower is better)
Translates to: SPDQSGRVRTLCESL*FYQNKHRPDILATH
Trigger: ATGCGTTGCTAGAATATCAGGCCTATGTTTGTTCTGGTAGAACCACAGAGACTCACACAAAGTTCTGACCCTACCACTCTGGTCTGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR TCA 90 bp TTTTGTGAGTTTGCCCGACCTCAGGTGCTGGGTTGGAGTGGTATTTaGAACCATACTACTCCGGGTTTGCCAACAAATTTCAAAGCTTCC +
Preference number: 1 (lower is better)
Translates to: FCEFARPQVLGWSGI*NHTTPGLPTNFKAS
Trigger: GGAAGCTTTGAAATTTGTTGGCAAACCCGGAGTAGTATGGTTTCAAATACCACTCCAACCCAGCACCTGAGGTCGGGCAAACTCACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR TCA 90 bp ACACTTCTACTGTTGTCAAAGTCGTCTGTAAACACCACCTCACACTaGATACAAAAGCAGCTTCTACCCAGCTCTGGGTTCACAACACGA +
Preference number: 1 (lower is better)
Translates to: TLLLLSKSSVNTTSH*IQKQLLPSSGFTTR
Trigger: TCGTGTTGTGAACCCAGAGCTGGGTAGAAGCTGCTTTTGTATTCAGTGTGAGGTGGTGTTTACAGACGACTTTGACAACAGTAGAAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR TCA 90 bp TGGTCCAGAAACTTCAGGTTCCTCATCCTAAATTCATTGCTTCTTTaGCTATACTGCACTATTTTCACTCGTCCTCTGAAGCTGCCAGGG +
Preference number: 1 (lower is better)
Translates to: WSRNFRFLILNSLLL*LYCTIFTRPLKLPG
Trigger: CCCTGGCAGCTTCAGAGGACGAGTGAAAATAGTGCAGTATAGTCAAAGAAGCAATGAATTTAGGATGAGGAACCTGAAGTTTCTGGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR TCA 90 bp TTGCAAAACCAAAGCAAACACCTGCTACCTAGAAACTCTATTTTGTaGGTTTGCCCGACCTCAGGTGCTGGGTTGGAGTGGTATTTGAAA +
Preference number: 1 (lower is better)
Translates to: LQNQSKHLLPRNSIL*VCPTSGAGLEWYLK
Trigger: TTTCAAATACCACTCCAACCCAGCACCTGAGGTCGGGCAAACTCACAAAATAGAGTTTCTAGGTAGCAGGTGTTTGCTTTGGTTTTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR TCA 90 bp TTTGAAGTGTTACATGTAGGAGGCTGGAAATGCCCATGTACTGGATaGGGAATGGCTAGAAGGGAGATCATGTGTTTGATTGCTTGCAGA +
Preference number: 1 (lower is better)
Translates to: FEVLHVGGWKCPCTG*GMARREIMCLIACR
Trigger: TCTGCAAGCAATCAAACACATGATCTCCCTTCTAGCCATTCCTCATCCAGTACATGGGCATTTCCAGCCTCCTACATGTAACACTTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR TCA 90 bp ATTCATTGCTTCTTTGACTATACTGCACTATTTTCACTCGTCCTCTaGAGCTGCCAGGGGAAGATTGTGCAATTTCCTGGAATATGTCCC +
Preference number: 1 (lower is better)
Translates to: IHCFFDYTALFSLVL*SCQGKIVQFPGICP
Trigger: GGGACATATTCCAGGAAATTGCACAATCTTCCCCTGGCAGCTTCAGAGGACGAGTGAAAATAGTGCAGTATAGTCAAAGAAGCAATGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR TCA 90 bp TGTGAACGTGATGTGTGCCTAATAATACTAACACTTGCTCATTTCTaGGCCGTACAACAAAACACTGTGCAGTTACAAACTTACGTGGGG +
Preference number: 1 (lower is better)
Translates to: CERDVCLIILTLAHF*AVQQNTVQLQTYVG
Trigger: CCCCACGTAAGTTTGTAACTGCACAGTGTTTTGTTGTACGGCTCAGAAATGAGCAAGTGTTAGTATTATTAGGCACACATCACGTTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR TCA 90 bp GCCCATGTACTGGATGAGGAATGGCTAGAAGGGAGATCATGTGTTTaGTTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTT +
Preference number: 1 (lower is better)
Translates to: AHVLDEEWLEGRSCV*LLAEQDKGLSPNNF
Trigger: AAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATGATCTCCCTTCTAGCCATTCCTCATCCAGTACATGGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR TCA 90 bp ACAGACATTTCCCTGAGAGCTTCCTGCCAAGAGAAATCAGCATGCTaGTTCACCATCGTGGAAGCCCATTTTTATGTAATTATTCCTCAA +
Preference number: 1 (lower is better)
Translates to: TDISLRASCQEKSAC*FTIVEAHFYVIIPQ
Trigger: TTGAGGAATAATTACATAAAAATGGGCTTCCACGATGGTGAATCAGCATGCTGATTTCTCTTGGCAGGAAGCTCTCAGGGAAATGTCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR GCA 90 bp AGGTGCTGGGTTGGAGTGGTATTTGAAACCATACTACTCCGGGTTTaGCAACAAATTTCAAAGCTTCCTTGGTTACCTTCCAAATTTCAA +
Preference number: 1 (lower is better)
Translates to: RCWVGVVFETILLRV*QQISKLPWLPSKFQ
Trigger: TTGAAATTTGGAAGGTAACCAAGGAAGCTTTGAAATTTGTTGGCAAACCCGGAGTAGTATGGTTTCAAATACCACTCCAACCCAGCACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR GCA 90 bp CAGTTCTGTTATGAGAAATGCTATTGCAAAACCAAAGCAAACACCTaGTACCTAGAAACTCTATTTTGTGAGTTTGCCCGACCTCAGGTG +
Preference number: 1 (lower is better)
Translates to: QFCYEKCYCKTKANT*YLETLFCEFARPQV
Trigger: CACCTGAGGTCGGGCAAACTCACAAAATAGAGTTTCTAGGTAGCAGGTGTTTGCTTTGGTTTTGCAATAGCATTTCTCATAACAGAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR GCA 90 bp TGCCCTTTGCTTACAAAGCAAATATACACCCATCTGTTTTTGGACTaGGGTTTCTCTATCCACCAGAGAGCATCTTTAAATGATTCACAG +
Preference number: 1 (lower is better)
Translates to: CPLLTKQIYTHLFLD*GFSIHQRASLNDSQ
Trigger: CTGTGAATCATTTAAAGATGCTCTCTGGTGGATAGAGAAACCGCAGTCCAAAAACAGATGGGTGTATATTTGCTTTGTAAGCAAAGGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR TCA 90 bp CGATTCCCAATTTGGGATGAAGACATTTTGATCTTAGGTAAGTGCTaGATATCTCCTGTAATGACAAGCCCTTTGAGAAATGCACGTGTA +
Preference number: 1 (lower is better)
Translates to: RFPIWDEDILILGKC*ISPVMTSPLRNARV
Trigger: TACACGTGCATTTCTCAAAGGGCTTGTCATTACAGGAGATATTCAGCACTTACCTAAGATCAAAATGTCTTCATCCCAAATTGGGAATCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR TCA 90 bp GCATCAGAAGGCAAATTAGAGAAGCTTCGGTGTTGTTGCTTAGTTTaGGCAATGAGGATAAAACCCAGAAAGTTTAGGTTAAGTGACAAG +
Preference number: 1 (lower is better)
Translates to: ASEGKLEKLRCCCLV*AMRIKPRKFRLSDK
Trigger: CTTGTCACTTAACCTAAACTTTCTGGGTTTTATCCTCATTGCTCAAACTAAGCAACAACACCGAAGCTTCTCTAATTTGCCTTCTGATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR GCA 90 bp AAAGATGTGGACACTGTTTTAGATGCGAGTATGATACATGCCCTTTaGTTACAAAGCAAATATACACCCATCTGTTTTTGGACTGCGGTT +
Preference number: 1 (lower is better)
Translates to: KDVDTVLDASMIHAL*LQSKYTPICFWTAV
Trigger: AACCGCAGTCCAAAAACAGATGGGTGTATATTTGCTTTGTAAGCAAAGGGCATGTATCATACTCGCATCTAAAACAGTGTCCACATCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR GCA 90 bp CTTTGGCAAAGATGTGGACACTGTTTTAGATGCGAGTATGATACATaGCCTTTGCTTACAAAGCAAATATACACCCATCTGTTTTTGGAC +
Preference number: 1 (lower is better)
Translates to: LWQRCGHCFRCEYDT*PLLTKQIYTHLFLD
Trigger: GTCCAAAAACAGATGGGTGTATATTTGCTTTGTAAGCAAAGGGCATGTATCATACTCGCATCTAAAACAGTGTCCACATCTTTGCCAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR GCA 90 bp GGTAAAATTCAGTGCCTTTGGCAAAGATGTGGACACTGTTTTAGATaGGAGTATGATACATGCCCTTTGCTTACAAAGCAAATATACACC +
Preference number: 1 (lower is better)
Translates to: GKIQCLWQRCGHCFR*EYDTCPLLTKQIYT
Trigger: GGTGTATATTTGCTTTGTAAGCAAAGGGCATGTATCATACTCGCATCTAAAACAGTGTCCACATCTTTGCCAAAGGCACTGAATTTTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR TCA 90 bp GAAAGCGTATGTTGCAGGAATAATTTGCCAGTTCAGTGTTTCCCATaGTATTATATACACTATGTGTGTGCGTGCAGAACTCACACATAT +
Preference number: 1 (lower is better)
Translates to: ESVCCRNNLPVQCFP*YYIHYVCACRTHTY
Trigger: ATATGTGTGAGTTCTGCACGCACACACATAGTGTATATAATATCATGGGAAACACTGAACTGGCAAATTATTCCTGCAACATACGCTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR GCA 90 bp TTCTTTCAAGCAAAGTGGCTAATCTTGAAATGTCTGCAAACCTCATaGATATGGCATGAAATAATTCGATTCCCAATTTGGGATGAAGAC +
Preference number: 1 (lower is better)
Translates to: FFQAKWLILKCLQTS*IWHEIIRFPIWDED
Trigger: GTCTTCATCCCAAATTGGGAATCGAATTATTTCATGCCATATGCATGAGGTTTGCAGACATTTCAAGATTAGCCACTTTGCTTGAAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR CCA 90 bp CAAGCAAAGTGGCTAATCTTGAAATGTCTGCAAACCTCATGCATATaGCATGAAATAATTCGATTCCCAATTTGGGATGAAGACATTTTG +
Preference number: 1 (lower is better)
Translates to: QAKWLILKCLQTSCI*HEIIRFPIWDEDIL
Trigger: CAAAATGTCTTCATCCCAAATTGGGAATCGAATTATTTCATGCCATATGCATGAGGTTTGCAGACATTTCAAGATTAGCCACTTTGCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR TCA 90 bp CTGATCCCTGGAATCCTTCTCTGTGCCACTCTGGTATTAGACTTCTCCGCTGTGGCCACGGCGCTCAGCTaGCTCACGAGCCTGTCCGCT +
Preference number: 2 (lower is better)
Translates to: LIPGILLCATLVLDFSAVATALS*LTSLSA
Trigger: AGCGGACAGGCTCGTGAGTCAGCTGAGCGCCGTGGC...CACAGCGGAGAAGTCTAATACCAGAGTGGCACAGAGAAGGATTCCAGGGATCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR TCA 90 bp CACAACACGAATGCCCTGTACAAAGGGAAGATATCTCCGCGGCCCTCCCACCTCAGCACTGGCCACAGCTaGTTAACAAAGGTGCAAGCC +
Preference number: 2 (lower is better)
Translates to: HNTNALYKGKISPRPSHLSTGHS*LTKVQA
Trigger: GGCTTGCACCTTTGTTAATCAGCTGTGGCCAGTGCT...GAGGTGGGAGGGCCGCGGAGATATCTTCCCTTTGTACAGGGCATTCGTGTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR GCA 90 bp CTGATCCCTGGAATCCTTCTCTGTGCCACTCTGGTATTAGACTTCTCCGCTGTGCTGGGAAGGCCTGGCTaGTCTCTGTGGAAAACAGCC +
Preference number: 2 (lower is better)
Translates to: LIPGILLCATLVLDFSAVLGRPG*SLWKTA
Trigger: GGCTGTTTTCCACAGAGAGCAGCCAGGCCTTCCCAG...CACAGCGGAGAAGTCTAATACCAGAGTGGCACAGAGAAGGATTCCAGGGATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR GCA 90 bp GTCTGTAAACACCACCTCACACTGAATACAAAAGCAGCTTCTACCCAGCTCTGGCGCTCTGCACAGACCTaGTGGGAAGGCCTGGCTGCT +
Preference number: 2 (lower is better)
Translates to: VCKHHLTLNTKAASTQLWRSAQT*WEGLAA
Trigger: AGCAGCCAGGCCTTCCCAGCAGGTCTGTGCAGAGCG...CCAGAGCTGGGTAGAAGCTGCTTTTGTATTCAGTGTGAGGTGGTGTTTACAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR CCA 90 bp AACAAAGGAGGTTGCTTAACACCAAGTCTGGCGAAGCCACGGCGCTCAGCTGACGTTCCACTTGGGGTCTaGATTCCCACTTTTGGGATC +
Preference number: 2 (lower is better)
Translates to: NKGGCLTPSLAKPRRSADVPLGV*IPTFGI
Trigger: GATCCCAAAAGTGGGAATCCAGACCCCAAGTGGAAC...GTCAGCTGAGCGCCGTGGCTTCGCCAGACTTGGTGTTAAGCAACCTCCTTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR TCA 90 bp GAGTGGTATTTGAAACCATACTACTCCGGGTTTGCCAACAAATTTCAAAGCTTCGCCACGGCGCTCAGCTaGCTCACGAGCCTGTCCGCT +
Preference number: 2 (lower is better)
Translates to: EWYLKPYYSGFANKFQSFATALS*LTSLSA
Trigger: AGCGGACAGGCTCGTGAGTCAGCTGAGCGCCGTGGC...GAAGCTTTGAAATTTGTTGGCAAACCCGGAGTAGTATGGTTTCAAATACCACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR GCA 90 bp CACAACACGAATGCCCTGTACAAAGGGAAGATATCTCCGCGGCCCTCCCACCTCGAACTGGGTCAGCTATaGTCATCTGAGATTCCAAAG +
Preference number: 2 (lower is better)
Translates to: HNTNALYKGKISPRPSHLELGQL*SSEIPK
Trigger: CTTTGGAATCTCAGATGAGCATAGCTGACCCAGTTC...GAGGTGGGAGGGCCGCGGAGATATCTTCCCTTTGTACAGGGCATTCGTGTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR GCA 90 bp GTCTGTAAACACCACCTCACACTGAATACAAAAGCAGCTTCTACCCAGCTCTGGCTGGGAAGGCCTGGCTaGTCTCTGTGGAAAACAGCC +
Preference number: 2 (lower is better)
Translates to: VCKHHLTLNTKAASTQLWLGRPG*SLWKTA
Trigger: GGCTGTTTTCCACAGAGAGCAGCCAGGCCTTCCCAG...CCAGAGCTGGGTAGAAGCTGCTTTTGTATTCAGTGTGAGGTGGTGTTTACAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR GCA 90 bp GTCATGGTAGCTGCTGACCTCAGTTTTGACCGATTTGGCATCAGAAGGCAAATTGGGCTTCCAGCGCTCTaGAGAGCAATGAGCCCTGCA +
Preference number: 2 (lower is better)
Translates to: VMVAADLSFDRFGIRRQIGLPAL*RAMSPA
Trigger: TGCAGGGCTCATTGCTCTGCAGAGCGCTGGAAGCCC...AATTTGCCTTCTGATGCCAAATCGGTCAAAACTGAGGTCAGCAGCTACCATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR CCA 90 bp CTGATCCCTGGAATCCTTCTCTGTGCCACTCTGGTATTAGACTTCTCCGCTGTGCCTGGCTGCTCTCTGTaGAAAACAGCCCTGGTTTCA +
Preference number: 2 (lower is better)
Translates to: LIPGILLCATLVLDFSAVPGCSL*KTALVS
Trigger: TGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGG...CACAGCGGAGAAGTCTAATACCAGAGTGGCACAGAGAAGGATTCCAGGGATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR CAA 90 bp CCTGCAGTGTTCCACTTGGGGTCTGGATTCCCACTTTTGGGATCCTaGGGAAGAATGTGGGAACTGGGTCAGCTATGCTCATCTGAGATT +
Preference number: 2 (lower is better)
Translates to: PAVFHLGSGFPLLGS*GRMWELGQLCSSEI
Trigger: AATCTCAGATGAGCATAGCTGACCCAGTTCCCACATTCTTCCCAAGGATCCCAAAAGTGGGAATCCAGACCCCAAGTGGAACACTGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR CAA 90 bp ATTCGTAAGCCTGCAGTGTTCCACTTGGGGTCTGGATTCCCACTTTaGGGATCCTTGGGAAGAATGTGGGAACTGGGTCAGCTATGCTCA +
Preference number: 2 (lower is better)
Translates to: IRKPAVFHLGSGFPL*GSLGRMWELGQLCS
Trigger: TGAGCATAGCTGACCCAGTTCCCACATTCTTCCCAAGGATCCCAAAAGTGGGAATCCAGACCCCAAGTGGAACACTGCAGGCTTACGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR TCA 90 bp AACAAAGGAGGTTGCTTAACACCAAGTCTGGCGAAGCCACGGCGCTCAGCTGACTCAGCTATGCTCATCTaGGATTCCAAAGCTAATGGG +
Preference number: 2 (lower is better)
Translates to: NKGGCLTPSLAKPRRSADSAMLI*DSKANG
Trigger: CCCATTAGCTTTGGAATCTCAGATGAGCATAGCTGA...GTCAGCTGAGCGCCGTGGCTTCGCCAGACTTGGTGTTAAGCAACCTCCTTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR TCA 90 bp CACAACACGAATGCCCTGTACAAAGGGAAGATATCTCCGCGGCCCTCCCACCTCAAGCCCTATTTTCTTTaGGAAGGTGCCATTCAGCAA +
Preference number: 2 (lower is better)
Translates to: HNTNALYKGKISPRPSHLKPYFL*EGAIQQ
Trigger: TTGCTGAATGGCACCTTCTCAAAGAAAATAGGGCTT...GAGGTGGGAGGGCCGCGGAGATATCTTCCCTTTGTACAGGGCATTCGTGTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR CCA 90 bp GGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACACTGGGCTGCAGTGTTCCACTTaGGGTCTGGATTCCCACTTT +
Preference number: 2 (lower is better)
Translates to: GLAALCGKQPWFQKHYTGLQCST*GLDSHF
Trigger: AAAGTGGGAATCCAGACCCCAAGTGGAACACTGCAG...CCCAGTGTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR CCA 90 bp CACAACACGAATGCCCTGTACAAAGGGAAGATATCTCCGCGGCCCTCCCACCTCGACAGGAAGCTCTATTaGGACAAGAAGATTCAGCTT +
Preference number: 2 (lower is better)
Translates to: HNTNALYKGKISPRPSHLDRKLY*DKKIQL
Trigger: AAGCTGAATCTTCTTGTCCCAATAGAGCTTCCTGTC...GAGGTGGGAGGGCCGCGGAGATATCTTCCCTTTGTACAGGGCATTCGTGTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR TCA 90 bp TACCTAGAAACTCTATTTTGTGAGTTTGCCCGACCTCAGGTGCTGGGTTGGAGTAGGTACAGGACACCCTaGCTGATCCCTGGAATCCTT +
Preference number: 2 (lower is better)
Translates to: YLETLFCEFARPQVLGWSRYRTP*LIPGIL
Trigger: AAGGATTCCAGGGATCAGTCAGGGTGTCCTGTACCT...ACTCCAACCCAGCACCTGAGGTCGGGCAAACTCACAAAATAGAGTTTCTAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR CAA 90 bp GAGCTCACTTCTCCTAACCATCTGGCAATGCCTGGAGAATGGAGATaGAGTGTGTGTGTGTGTGCTTGTGAGAGAGAGAGAAGGAAGAAG +
Preference number: 2 (lower is better)
Translates to: ELTSPNHLAMPGEWR*SVCVCACERERRKK
Trigger: CTTCTTCCTTCTCTCTCTCTCACAAGCACACACACACACACTCAATCTCCATTCTCCAGGCATTGCCAGATGGTTAGGAGAAGTGAGCTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR GCA 90 bp CTGATCCCTGGAATCCTTCTCTGTGCCACTCTGGTATTAGACTTCTCCGCTGTGCTGTGGGTTGATGTGTaGGTTTTGTCACTGCTATTG +
Preference number: 2 (lower is better)
Translates to: LIPGILLCATLVLDFSAVLWVDV*VLSLLL
Trigger: CAATAGCAGTGACAAAACGCACACATCAACCCACAG...CACAGCGGAGAAGTCTAATACCAGAGTGGCACAGAGAAGGATTCCAGGGATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR GCA 90 bp CTGATCCCTGGAATCCTTCTCTGTGCCACTCTGGTATTAGACTTCTCCGCTGTGATCAACAAAGGAGGTTaGTTAACACCAAGTCTGGCG +
Preference number: 2 (lower is better)
Translates to: LIPGILLCATLVLDFSAVINKGG*LTPSLA
Trigger: CGCCAGACTTGGTGTTAAGCAACCTCCTTTGTTGAT...CACAGCGGAGAAGTCTAATACCAGAGTGGCACAGAGAAGGATTCCAGGGATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR GCA 90 bp CTGATCCCTGGAATCCTTCTCTGTGCCACTCTGGTATTAGACTTCTCCGCTGTGCTAGAAAGAGTTAGGTaGTTGGTGATGCCAACAGGA +
Preference number: 2 (lower is better)
Translates to: LIPGILLCATLVLDFSAVLERVR*LVMPTG
Trigger: TCCTGTTGGCATCACCAAGCACCTAACTCTTTCTAG...CACAGCGGAGAAGTCTAATACCAGAGTGGCACAGAGAAGGATTCCAGGGATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR CCA 90 bp AACAAAGGAGGTTGCTTAACACCAAGTCTGGCGAAGCCACGGCGCTCAGCTGACCCAGGCAAATCACTTTaGGTATATAATTGCCGTCAA +
Preference number: 2 (lower is better)
Translates to: NKGGCLTPSLAKPRRSADPGKSL*VYNCRQ
Trigger: TTGACGGCAATTATATACCCAAAGTGATTTGCCTGG...GTCAGCTGAGCGCCGTGGCTTCGCCAGACTTGGTGTTAAGCAACCTCCTTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR CCA 90 bp CTGATCCCTGGAATCCTTCTCTGTGCCACTCTGGTATTAGACTTCTCCGCTGTGTTTGAAAGGACACCATaGCTGACGACTGAAGAGTCA +
Preference number: 2 (lower is better)
Translates to: LIPGILLCATLVLDFSAVFERTP*LTTEES
Trigger: TGACTCTTCAGTCGTCAGCCATGGTGTCCTTTCAAA...CACAGCGGAGAAGTCTAATACCAGAGTGGCACAGAGAAGGATTCCAGGGATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR CCA 90 bp GTCATGGTAGCTGCTGACCTCAGTTTTGACCGATTTGGCATCAGAAGGCAAATTACCCTGACTGATCCCTaGAATCCTTCTCTGTGCCAC +
Preference number: 2 (lower is better)
Translates to: VMVAADLSFDRFGIRRQITLTDP*NPSLCH
Trigger: GTGGCACAGAGAAGGATTCCAGGGATCAGTCAGGGT...AATTTGCCTTCTGATGCCAAATCGGTCAAAACTGAGGTCAGCAGCTACCATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR TCA 90 bp TACCTAGAAACTCTATTTTGTGAGTTTGCCCGACCTCAGGTGCTGGGTTGGAGTGTGAAGGTTACACAATaGACACCAGAAAGCACTGGC +
Preference number: 2 (lower is better)
Translates to: YLETLFCEFARPQVLGWSVKVTQ*TPESTG
Trigger: GCCAGTGCTTTCTGGTGTTCATTGTGTAACCTTCAC...ACTCCAACCCAGCACCTGAGGTCGGGCAAACTCACAAAATAGAGTTTCTAGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR TCA 90 bp CTGATCCCTGGAATCCTTCTCTGTGCCACTCTGGTATTAGACTTCTCCGCTGTGATACACAGACACCACTaGGTACACTTCTACTGTTGT +
Preference number: 2 (lower is better)
Translates to: LIPGILLCATLVLDFSAVIHRHH*VHFYCC
Trigger: ACAACAGTAGAAGTGTACTCAGTGGTGTCTGTGTAT...CACAGCGGAGAAGTCTAATACCAGAGTGGCACAGAGAAGGATTCCAGGGATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR TCA 90 bp TACCTAGAAACTCTATTTTGTGAGTTTGCCCGACCTCAGGTGCTGGGTTGGAGTAAGGATGGGAAGTGCTaGAGTACTGGGACACTTGAA +
Preference number: 2 (lower is better)
Translates to: YLETLFCEFARPQVLGWSKDGKC*STGTLE
Trigger: TTCAAGTGTCCCAGTACTTCAGCACTTCCCATCCTT...ACTCCAACCCAGCACCTGAGGTCGGGCAAACTCACAAAATAGAGTTTCTAGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR GCA 90 bp GACCTAGAGTCTTGGATTTGTTCCTTTTCTGCTATTATTAGCATCACAAAAGGACGCTCTGCACAGACCTaGTGGGAAGGCCTGGCTGCT +
Preference number: 2 (lower is better)
Translates to: DLESWICSFSAIISITKGRSAQT*WEGLAA
Trigger: AGCAGCCAGGCCTTCCCAGCAGGTCTGTGCAGAGCG...TCCTTTTGTGATGCTAATAATAGCAGAAAAGGAACAAATCCAAGACTCTAGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR CCA 90 bp GTCATGGTAGCTGCTGACCTCAGTTTTGACCGATTTGGCATCAGAAGGCAAATTGTTCCACTTGGGGTCTaGATTCCCACTTTTGGGATC +
Preference number: 2 (lower is better)
Translates to: VMVAADLSFDRFGIRRQIVPLGV*IPTFGI
Trigger: GATCCCAAAAGTGGGAATCCAGACCCCAAGTGGAAC...AATTTGCCTTCTGATGCCAAATCGGTCAAAACTGAGGTCAGCAGCTACCATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR CCA 90 bp CTGATCCCTGGAATCCTTCTCTGTGCCACTCTGGTATTAGACTTCTCCGCTGTGAACACCAGAAAGCACTaGCCACAGCTGATTAACAAA +
Preference number: 2 (lower is better)
Translates to: LIPGILLCATLVLDFSAVNTRKH*PQLINK
Trigger: TTTGTTAATCAGCTGTGGCCAGTGCTTTCTGGTGTT...CACAGCGGAGAAGTCTAATACCAGAGTGGCACAGAGAAGGATTCCAGGGATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR TCA 90 bp TGGGAAGGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACCAGTTACCAAAGTACTaGAAGCGTATGTTGCAGGAA +
Preference number: 2 (lower is better)
Translates to: WEGLAALCGKQPWFQKHYQLPKY*KRMLQE
Trigger: TTCCTGCAACATACGCTTTCAGTACTTTGGTAACTG...GTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCCTTCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR TCA 90 bp TACCTAGAAACTCTATTTTGTGAGTTTGCCCGACCTCAGGTGCTGGGTTGGAGTTCACCTATTCCTGGGTaGAGGTTACACAATGAACAC +
Preference number: 2 (lower is better)
Translates to: YLETLFCEFARPQVLGWSSPIPG*RLHNEH
Trigger: GTGTTCATTGTGTAACCTTCACCCAGGAATAGGTGA...ACTCCAACCCAGCACCTGAGGTCGGGCAAACTCACAAAATAGAGTTTCTAGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR TCA 90 bp CTGATCCCTGGAATCCTTCTCTGTGCCACTCTGGTATTAGACTTCTCCGCTGTGCACAGGTGGATAATATaGCATTCTGTAGTTTGCTGT +
Preference number: 2 (lower is better)
Translates to: LIPGILLCATLVLDFSAVHRWII*HSVVCC
Trigger: ACAGCAAACTACAGAATGTCATATTATCCACCTGTG...CACAGCGGAGAAGTCTAATACCAGAGTGGCACAGAGAAGGATTCCAGGGATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR CCA 90 bp GTCATGGTAGCTGCTGACCTCAGTTTTGACCGATTTGGCATCAGAAGGCAAATTCACTTTTGGGATCCTTaGGAAGAATGTGGGAACTGG +
Preference number: 2 (lower is better)
Translates to: VMVAADLSFDRFGIRRQIHFWDP*EECGNW
Trigger: CCAGTTCCCACATTCTTCCCAAGGATCCCAAAAGTG...AATTTGCCTTCTGATGCCAAATCGGTCAAAACTGAGGTCAGCAGCTACCATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR CCA 90 bp GTCATGGTAGCTGCTGACCTCAGTTTTGACCGATTTGGCATCAGAAGGCAAATTAAGAAACAGCCCTTTTaGGAGGGAGGCAAGATAGGA +
Preference number: 2 (lower is better)
Translates to: VMVAADLSFDRFGIRRQIKKQPF*EGGKIG
Trigger: TCCTATCTTGCCTCCCTCCCAAAAGGGCTGTTTCTT...AATTTGCCTTCTGATGCCAAATCGGTCAAAACTGAGGTCAGCAGCTACCATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR TCA 90 bp TACCTAGAAACTCTATTTTGTGAGTTTGCCCGACCTCAGGTGCTGGGTTGGAGTATACACAGACACCACTaGGTACACTTCTACTGTTGT +
Preference number: 2 (lower is better)
Translates to: YLETLFCEFARPQVLGWSIHRHH*VHFYCC
Trigger: ACAACAGTAGAAGTGTACTCAGTGGTGTCTGTGTAT...ACTCCAACCCAGCACCTGAGGTCGGGCAAACTCACAAAATAGAGTTTCTAGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR TCA 90 bp TACCTAGAAACTCTATTTTGTGAGTTTGCCCGACCTCAGGTGCTGGGTTGGAGTACCATGGCTGACGACTaGAGAGTCATATTTATCAAC +
Preference number: 2 (lower is better)
Translates to: YLETLFCEFARPQVLGWSTMADD*RVIFIN
Trigger: GTTGATAAATATGACTCTTCAGTCGTCAGCCATGGT...ACTCCAACCCAGCACCTGAGGTCGGGCAAACTCACAAAATAGAGTTTCTAGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR TCA 90 bp AAAACCAAAGCAAACACCTGCTACCTAGAAACTCTATTTTGTGAGTTTGCCCGATTCTCTCTCGATACATaGAGGGGCTTCCAGCGCTCT +
Preference number: 2 (lower is better)
Translates to: KTKANTCYLETLFCEFARFSLDT*RGFQRS
Trigger: AGAGCGCTGGAAGCCCCTTCATGTATCGAGAGAGAA...TCGGGCAAACTCACAAAATAGAGTTTCTAGGTAGCAGGTGTTTGCTTTGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR GCA 90 bp TGGGAAGGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACGTTGCAGGAATAATTTaGCAGTTCAGTGTTTCCCAT +
Preference number: 2 (lower is better)
Translates to: WEGLAALCGKQPWFQKHYVAGII*QFSVSH
Trigger: ATGGGAAACACTGAACTGGCAAATTATTCCTGCAAC...GTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCCTTCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR CCA 90 bp GAGTGGTATTTGAAACCATACTACTCCGGGTTTGCCAACAAATTTCAAAGCTTCCCTGGCTGCTCTCTGTaGAAAACAGCCCTGGTTTCA +
Preference number: 2 (lower is better)
Translates to: EWYLKPYYSGFANKFQSFPGCSL*KTALVS
Trigger: TGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGG...GAAGCTTTGAAATTTGTTGGCAAACCCGGAGTAGTATGGTTTCAAATACCACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR CCA 90 bp GCCACAGGAAAGCTCCAATATACTCTATTCATTGCTCAAGTGGACCTTAAAGAAGCTTCTACCCAGCTCTaGGTTCACAACACGAATGCC +
Preference number: 2 (lower is better)
Translates to: ATGKLQYTLFIAQVDLKEASTQL*VHNTNA
Trigger: GGCATTCGTGTTGTGAACCCAGAGCTGGGTAGAAGC...TTCTTTAAGGTCCACTTGAGCAATGAATAGAGTATATTGGAGCTTTCCTGTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR CCA 90 bp GAGTGGTATTTGAAACCATACTACTCCGGGTTTGCCAACAAATTTCAAAGCTTCGCTGTGACAGAGCCTTaGCATCCTTCTTTCCTCCCT +
Preference number: 2 (lower is better)
Translates to: EWYLKPYYSGFANKFQSFAVTEP*HPSFLP
Trigger: AGGGAGGAAAGAAGGATGCCAAGGCTCTGTCACAGC...GAAGCTTTGAAATTTGTTGGCAAACCCGGAGTAGTATGGTTTCAAATACCACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR CCA 90 bp AAAACCAAAGCAAACACCTGCTACCTAGAAACTCTATTTTGTGAGTTTGCCCGAACCCTGACTGATCCCTaGAATCCTTCTCTGTGCCAC +
Preference number: 2 (lower is better)
Translates to: KTKANTCYLETLFCEFARTLTDP*NPSLCH
Trigger: GTGGCACAGAGAAGGATTCCAGGGATCAGTCAGGGT...TCGGGCAAACTCACAAAATAGAGTTTCTAGGTAGCAGGTGTTTGCTTTGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR TCA 90 bp GTCATGGTAGCTGCTGACCTCAGTTTTGACCGATTTGGCATCAGAAGGCAAATTCAGTTACCAAAGTACTaGAAGCGTATGTTGCAGGAA +
Preference number: 2 (lower is better)
Translates to: VMVAADLSFDRFGIRRQIQLPKY*KRMLQE
Trigger: TTCCTGCAACATACGCTTTCAGTACTTTGGTAACTG...AATTTGCCTTCTGATGCCAAATCGGTCAAAACTGAGGTCAGCAGCTACCATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR TCA 90 bp GTCATGGTAGCTGCTGACCTCAGTTTTGACCGATTTGGCATCAGAAGGCAAATTAAGCCCTATTTTCTTTaGGAAGGTGCCATTCAGCAA +
Preference number: 2 (lower is better)
Translates to: VMVAADLSFDRFGIRRQIKPYFL*EGAIQQ
Trigger: TTGCTGAATGGCACCTTCTCAAAGAAAATAGGGCTT...AATTTGCCTTCTGATGCCAAATCGGTCAAAACTGAGGTCAGCAGCTACCATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR GCA 90 bp TACCTAGAAACTCTATTTTGTGAGTTTGCCCGACCTCAGGTGCTGGGTTGGAGTCACTATGTGTGTGCGTaGAGAACTCACACATATATA +
Preference number: 2 (lower is better)
Translates to: YLETLFCEFARPQVLGWSHYVCA*RTHTYI
Trigger: TATATATGTGTGAGTTCTGCACGCACACACATAGTG...ACTCCAACCCAGCACCTGAGGTCGGGCAAACTCACAAAATAGAGTTTCTAGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR GCA 90 bp GTCTGTAAACACCACCTCACACTGAATACAAAAGCAGCTTCTACCCAGCTCTGGGTTGCAGGAATAATTTaGCAGTTCAGTGTTTCCCAT +
Preference number: 2 (lower is better)
Translates to: VCKHHLTLNTKAASTQLWVAGII*QFSVSH
Trigger: ATGGGAAACACTGAACTGGCAAATTATTCCTGCAAC...CCAGAGCTGGGTAGAAGCTGCTTTTGTATTCAGTGTGAGGTGGTGTTTACAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR GCA 90 bp GAGTGGTATTTGAAACCATACTACTCCGGGTTTGCCAACAAATTTCAAAGCTTCTGCATCAGAGCTCTGTaGTCCAGCTTCTCTCTCGAT +
Preference number: 2 (lower is better)
Translates to: EWYLKPYYSGFANKFQSFCIRAL*SSFSLD
Trigger: ATCGAGAGAGAAGCTGGAGCACAGAGCTCTGATGCA...GAAGCTTTGAAATTTGTTGGCAAACCCGGAGTAGTATGGTTTCAAATACCACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR CCA 90 bp GAGTGGTATTTGAAACCATACTACTCCGGGTTTGCCAACAAATTTCAAAGCTTCTCCTTGGGAAGAATGTaGGAACTGGGTCAGCTATGC +
Preference number: 2 (lower is better)
Translates to: EWYLKPYYSGFANKFQSFSLGRM*ELGQLC
Trigger: GCATAGCTGACCCAGTTCCCACATTCTTCCCAAGGA...GAAGCTTTGAAATTTGTTGGCAAACCCGGAGTAGTATGGTTTCAAATACCACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR CCA 90 bp GAGTGGTATTTGAAACCATACTACTCCGGGTTTGCCAACAAATTTCAAAGCTTCCTGCAGTGTTCCACTTaGGGTCTGGATTCCCACTTT +
Preference number: 2 (lower is better)
Translates to: EWYLKPYYSGFANKFQSFLQCST*GLDSHF
Trigger: AAAGTGGGAATCCAGACCCCAAGTGGAACACTGCAG...GAAGCTTTGAAATTTGTTGGCAAACCCGGAGTAGTATGGTTTCAAATACCACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR CAA 90 bp TGGTTCTACCAGAACAAACATAGGCCTGATATTCTAGCAACGCATTaGGATGACTTCCATATATCCAAATACACTATCCGTCTCTGCGCG +
Preference number: 2 (lower is better)
Translates to: WFYQNKHRPDILATH*DDFHISKYTIRLCA
Trigger: CGCGCAGAGACGGATAGTGTATTTGGATATATGGAAGTCATCCAAATGCGTTGCTAGAATATCAGGCCTATGTTTGTTCTGGTAGAACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR TCA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCATGTGGTTCATTCTTTaGGCTCAGAGGGGCCCCGAT +
Preference number: 2 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFMWFIL*AQRGPD
Trigger: ATCGGGGCCCCTCTGAGCTCAAAGAATGAACCACAT...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR TCA 90 bp GAGTGGTATTTGAAACCATACTACTCCGGGTTTGCCAACAAATTTCAAAGCTTCCTGGAGAATGGAGATTaGGTGTGTGTGTGTGTGCTT +
Preference number: 2 (lower is better)
Translates to: EWYLKPYYSGFANKFQSFLENGD*VCVCVL
Trigger: AAGCACACACACACACACTCAATCTCCATTCTCCAG...GAAGCTTTGAAATTTGTTGGCAAACCCGGAGTAGTATGGTTTCAAATACCACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR TCA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCTCCTTCTTTCCTCCCTaGGTCAGAGCTGAAACAGCC +
Preference number: 2 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFSFFPP*VRAETA
Trigger: GGCTGTTTCAGCTCTGACTCAGGGAGGAAAGAAGGA...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR TCA 90 bp AAAACCAAAGCAAACACCTGCTACCTAGAAACTCTATTTTGTGAGTTTGCCCGAGGTTGGAGTGGTATTTaGAACCATACTACTCCGGGT +
Preference number: 2 (lower is better)
Translates to: KTKANTCYLETLFCEFARGWSGI*NHTTPG
Trigger: ACCCGGAGTAGTATGGTTTCAAATACCACTCCAACC...TCGGGCAAACTCACAAAATAGAGTTTCTAGGTAGCAGGTGTTTGCTTTGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR GCA 90 bp TACCTAGAAACTCTATTTTGTGAGTTTGCCCGACCTCAGGTGCTGGGTTGGAGTACTGAAAGCGTATGTTaGAGGAATAATTTGCCAGTT +
Preference number: 2 (lower is better)
Translates to: YLETLFCEFARPQVLGWSTESVC*RNNLPV
Trigger: AACTGGCAAATTATTCCTGCAACATACGCTTTCAGT...ACTCCAACCCAGCACCTGAGGTCGGGCAAACTCACAAAATAGAGTTTCTAGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR CCA 90 bp GCCACAGGAAAGCTCCAATATACTCTATTCATTGCTCAAGTGGACCTTAAAGAAGAAGAATGTGGGAACTaGGTCAGCTATGCTCATCTG +
Preference number: 2 (lower is better)
Translates to: ATGKLQYTLFIAQVDLKEEECGN*VSYAHL
Trigger: CAGATGAGCATAGCTGACCCAGTTCCCACATTCTTC...TTCTTTAAGGTCCACTTGAGCAATGAATAGAGTATATTGGAGCTTTCCTGTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR CCA 90 bp TACCTAGAAACTCTATTTTGTGAGTTTGCCCGACCTCAGGTGCTGGGTTGGAGTTGTGGAAAACAGCCCTaGTTTCAAAAACATTACACT +
Preference number: 2 (lower is better)
Translates to: YLETLFCEFARPQVLGWSCGKQP*FQKHYT
Trigger: AGTGTAATGTTTTTGAAACCAGGGCTGTTTTCCACA...ACTCCAACCCAGCACCTGAGGTCGGGCAAACTCACAAAATAGAGTTTCTAGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR CCA 90 bp GAGTGGTATTTGAAACCATACTACTCCGGGTTTGCCAACAAATTTCAAAGCTTCCCATCTGGCAATGCCTaGAGAATGGAGATTGAGTGT +
Preference number: 2 (lower is better)
Translates to: EWYLKPYYSGFANKFQSFPSGNA*RMEIEC
Trigger: ACACTCAATCTCCATTCTCCAGGCATTGCCAGATGG...GAAGCTTTGAAATTTGTTGGCAAACCCGGAGTAGTATGGTTTCAAATACCACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR CAA 90 bp GAACATTGGGTTACCATTCTAGAAACCTTTCTCAGGTCTGCAATGTaGACTCACACATTAATGCTGGGAGAGGCTGAAGATTTAGAGTCA +
Preference number: 2 (lower is better)
Translates to: EHWVTILETFLRSAM*THTLMLGEAEDLES
Trigger: TGACTCTAAATCTTCAGCCTCTCCCAGCATTAATGTGTGAGTCAACATTGCAGACCTGAGAAAGGTTTCTAGAATGGTAACCCAATGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR TCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGACTAAGGTCTGTGGGTTaGTGTGTGCGTTTTGTCACT +
Preference number: 2 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRLRSVG*CVRFVT
Trigger: AGTGACAAAACGCACACATCAACCCACAGACCTTAG...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
3UTR-3UTR TCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTCTAAGGTCTGTGGGTTaGTGTGTGCGTTTTGTCACT +
Preference number: 2 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSLRSVG*CVRFVT
Trigger: AGTGACAAAACGCACACATCAACCCACAGACCTTAG...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
3UTR-3UTR TCA 90 bp GAGTGGTATTTGAAACCATACTACTCCGGGTTTGCCAACAAATTTCAAAGCTTCTCAGCTATGCTCATCTaGGATTCCAAAGCTAATGGG +
Preference number: 2 (lower is better)
Translates to: EWYLKPYYSGFANKFQSFSAMLI*DSKANG
Trigger: CCCATTAGCTTTGGAATCTCAGATGAGCATAGCTGA...GAAGCTTTGAAATTTGTTGGCAAACCCGGAGTAGTATGGTTTCAAATACCACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR TCA 90 bp GTCATGGTAGCTGCTGACCTCAGTTTTGACCGATTTGGCATCAGAAGGCAAATTCTCATGCATATGGCATaGAATAATTCGATTCCCAAT +
Preference number: 2 (lower is better)
Translates to: VMVAADLSFDRFGIRRQILMHMA*NNSIPN
Trigger: ATTGGGAATCGAATTATTTCATGCCATATGCATGAG...AATTTGCCTTCTGATGCCAAATCGGTCAAAACTGAGGTCAGCAGCTACCATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR GCA 90 bp GCCACAGGAAAGCTCCAATATACTCTATTCATTGCTCAAGTGGACCTTAAAGAACTGTGGGTTGATGTGTaGGTTTTGTCACTGCTATTG +
Preference number: 2 (lower is better)
Translates to: ATGKLQYTLFIAQVDLKELWVDV*VLSLLL
Trigger: CAATAGCAGTGACAAAACGCACACATCAACCCACAG...TTCTTTAAGGTCCACTTGAGCAATGAATAGAGTATATTGGAGCTTTCCTGTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR GCA 90 bp GAGTGGTATTTGAAACCATACTACTCCGGGTTTGCCAACAAATTTCAAAGCTTCGGTTCACAACACGAATaGCCTGTACAAAGGGAAGAT +
Preference number: 2 (lower is better)
Translates to: EWYLKPYYSGFANKFQSFGSQHE*PVQRED
Trigger: ATCTTCCCTTTGTACAGGGCATTCGTGTTGTGAACC...GAAGCTTTGAAATTTGTTGGCAAACCCGGAGTAGTATGGTTTCAAATACCACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR CCA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCTCCTTGGGAAGAATGTaGGAACTGGGTCAGCTATGC +
Preference number: 2 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFSLGRM*ELGQLC
Trigger: GCATAGCTGACCCAGTTCCCACATTCTTCCCAAGGA...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR CCA 90 bp AAAACCAAAGCAAACACCTGCTACCTAGAAACTCTATTTTGTGAGTTTGCCCGACTGGATTCCCACTTTTaGGATCCTTGGGAAGAATGT +
Preference number: 2 (lower is better)
Translates to: KTKANTCYLETLFCEFARLDSHF*DPWEEC
Trigger: ACATTCTTCCCAAGGATCCCAAAAGTGGGAATCCAG...TCGGGCAAACTCACAAAATAGAGTTTCTAGGTAGCAGGTGTTTGCTTTGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR CCA 90 bp GTCATGGTAGCTGCTGACCTCAGTTTTGACCGATTTGGCATCAGAAGGCAAATTTGTGGAAAACAGCCCTaGTTTCAAAAACATTACACT +
Preference number: 2 (lower is better)
Translates to: VMVAADLSFDRFGIRRQICGKQP*FQKHYT
Trigger: AGTGTAATGTTTTTGAAACCAGGGCTGTTTTCCACA...AATTTGCCTTCTGATGCCAAATCGGTCAAAACTGAGGTCAGCAGCTACCATGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR CAA 90 bp CAAAGATGTGGACACTGTTTTAGATGCGAGTATGATACATGCCCTTaGCTTACAAAGCAAATATACACCCATCTGTTTTTGGACTGCGGT +
Preference number: 2 (lower is better)
Translates to: QRCGHCFRCEYDTCP*LTKQIYTHLFLDCG
Trigger: ACCGCAGTCCAAAAACAGATGGGTGTATATTTGCTTTGTAAGCAAAGGGCATGTATCATACTCGCATCTAAAACAGTGTCCACATCTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR TCA 90 bp GACCTAGAGTCTTGGATTTGTTCCTTTTCTGCTATTATTAGCATCACAAAAGGACTAAGGTCTGTGGGTTaGTGTGTGCGTTTTGTCACT +
Preference number: 2 (lower is better)
Translates to: DLESWICSFSAIISITKGLRSVG*CVRFVT
Trigger: AGTGACAAAACGCACACATCAACCCACAGACCTTAG...TCCTTTTGTGATGCTAATAATAGCAGAAAAGGAACAAATCCAAGACTCTAGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR TCA 90 bp AAAACCAAAGCAAACACCTGCTACCTAGAAACTCTATTTTGTGAGTTTGCCCGACTTAAAGAATCACTTTaGAAGGACACCATGGCTGAC +
Preference number: 2 (lower is better)
Translates to: KTKANTCYLETLFCEFARLKESL*KDTMAD
Trigger: GTCAGCCATGGTGTCCTTTCAAAGTGATTCTTTAAG...TCGGGCAAACTCACAAAATAGAGTTTCTAGGTAGCAGGTGTTTGCTTTGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR GCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTCTGTGGGTTGATGTGTaGGTTTTGTCACTGCTATTG +
Preference number: 2 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSLWVDV*VLSLLL
Trigger: CAATAGCAGTGACAAAACGCACACATCAACCCACAG...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
3UTR-3UTR CCA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCCACTTTTGGGATCCTTaGGAAGAATGTGGGAACTGG +
Preference number: 2 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFHFWDP*EECGNW
Trigger: CCAGTTCCCACATTCTTCCCAAGGATCCCAAAAGTG...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR CCA 90 bp GCCACAGGAAAGCTCCAATATACTCTATTCATTGCTCAAGTGGACCTTAAAGAAGACAGGAAGCTCTATTaGGACAAGAAGATTCAGCTT +
Preference number: 2 (lower is better)
Translates to: ATGKLQYTLFIAQVDLKEDRKLY*DKKIQL
Trigger: AAGCTGAATCTTCTTGTCCCAATAGAGCTTCCTGTC...TTCTTTAAGGTCCACTTGAGCAATGAATAGAGTATATTGGAGCTTTCCTGTGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR CAA 90 bp GATACATGCCCTTTGCTTACAAAGCAAATATACACCCATCTGTTTTaGGACTGCGGTTTCTCTATCCACCAGAGAGCATCTTTAAATGAT +
Preference number: 2 (lower is better)
Translates to: DTCPLLTKQIYTHLF*DCGFSIHQRASLND
Trigger: ATCATTTAAAGATGCTCTCTGGTGGATAGAGAAACCGCAGTCCAAAAACAGATGGGTGTATATTTGCTTTGTAAGCAAAGGGCATGTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR TCA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCTCACCTATTCCTGGGTaGAGGTTACACAATGAACAC +
Preference number: 2 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFSPIPG*RLHNEH
Trigger: GTGTTCATTGTGTAACCTTCACCCAGGAATAGGTGA...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR TCA 90 bp AAAACCAAAGCAAACACCTGCTACCTAGAAACTCTATTTTGTGAGTTTGCCCGATTTCCCTGTGTAAAATaGTTTCAGACACAATGGTGG +
Preference number: 2 (lower is better)
Translates to: KTKANTCYLETLFCEFARFPCVK*FQTQWW
Trigger: CCACCATTGTGTCTGAAATCATTTTACACAGGGAAA...TCGGGCAAACTCACAAAATAGAGTTTCTAGGTAGCAGGTGTTTGCTTTGGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR GCA 90 bp GACCTAGAGTCTTGGATTTGTTCCTTTTCTGCTATTATTAGCATCACAAAAGGAGAACTGGGTCAGCTATaGTCATCTGAGATTCCAAAG +
Preference number: 2 (lower is better)
Translates to: DLESWICSFSAIISITKGELGQL*SSEIPK
Trigger: CTTTGGAATCTCAGATGAGCATAGCTGACCCAGTTC...TCCTTTTGTGATGCTAATAATAGCAGAAAAGGAACAAATCCAAGACTCTAGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR GCA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCATCAACAAAGGAGGTTaGTTAACACCAAGTCTGGCG +
Preference number: 2 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFINKGG*LTPSLA
Trigger: CGCCAGACTTGGTGTTAAGCAACCTCCTTTGTTGAT...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR GCA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCGCCAGGGGAAGATTGTaGAATTTCCTGGAATATGTC +
Preference number: 2 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFARGRL*NFLEYV
Trigger: GACATATTCCAGGAAATTGCACAATCTTCCCCTGGC...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR CCA 90 bp AAAACCAAAGCAAACACCTGCTACCTAGAAACTCTATTTTGTGAGTTTGCCCGACCAGGCAAATCACTTTaGGTATATAATTGCCGTCAA +
Preference number: 2 (lower is better)
Translates to: KTKANTCYLETLFCEFARPGKSL*VYNCRQ
Trigger: TTGACGGCAATTATATACCCAAAGTGATTTGCCTGG...TCGGGCAAACTCACAAAATAGAGTTTCTAGGTAGCAGGTGTTTGCTTTGGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR CCA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCCTGGATTCCCACTTTTaGGATCCTTGGGAAGAATGT +
Preference number: 2 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFLDSHF*DPWEEC
Trigger: ACATTCTTCCCAAGGATCCCAAAAGTGGGAATCCAG...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR CCA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCGGTGCTGGGTTGGAGTaGTATTTGAAACCATACTAC +
Preference number: 2 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFGAGLE*YLKPYY
Trigger: GTAGTATGGTTTCAAATACCACTCCAACCCAGCACC...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR TCA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCACACTTGCTCATTTCTaGGCCGTACAACAAAACACT +
Preference number: 2 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFTLAHF*AVQQNT
Trigger: AGTGTTTTGTTGTACGGCTCAGAAATGAGCAAGTGT...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR GCA 90 bp GCCACAGGAAAGCTCCAATATACTCTATTCATTGCTCAAGTGGACCTTAAAGAAGTACGAAACTTGAACTaGACAAAACAGTACTTTGCA +
Preference number: 2 (lower is better)
Translates to: ATGKLQYTLFIAQVDLKEVRNLN*TKQYFA
Trigger: TGCAAAGTACTGTTTTGTGCAGTTCAAGTTTCGTAC...TTCTTTAAGGTCCACTTGAGCAATGAATAGAGTATATTGGAGCTTTCCTGTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR GCA 90 bp AAAACCAAAGCAAACACCTGCTACCTAGAAACTCTATTTTGTGAGTTTGCCCGAATACTACTCCGGGTTTaGCAACAAATTTCAAAGCTT +
Preference number: 2 (lower is better)
Translates to: KTKANTCYLETLFCEFARILLRV*QQISKL
Trigger: AAGCTTTGAAATTTGTTGGCAAACCCGGAGTAGTAT...TCGGGCAAACTCACAAAATAGAGTTTCTAGGTAGCAGGTGTTTGCTTTGGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR TCA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCCACAGGTGGATAATATaGCATTCTGTAGTTTGCTGT +
Preference number: 2 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFHRWII*HSVVCC
Trigger: ACAGCAAACTACAGAATGTCATATTATCCACCTGTG...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR TCA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCATATGTCCCCATCCTTaGATCATCTCTACTCAGATA +
Preference number: 2 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFICPHP*IISTQI
Trigger: TATCTGAGTAGAGATGATTCAAGGATGGGGACATAT...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR TCA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCTTTATTTTCTTATCATaGGCCTCCCTTCCCAGACAT +
Preference number: 2 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFFIFLS*ASLPRH
Trigger: ATGTCTGGGAAGGGAGGCTCATGATAAGAAAATAAA...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR CCA 90 bp AAAACCAAAGCAAACACCTGCTACCTAGAAACTCTATTTTGTGAGTTTGCCCGACAAACCTCATGCATATaGCATGAAATAATTCGATTC +
Preference number: 2 (lower is better)
Translates to: KTKANTCYLETLFCEFARQTSCI*HEIIRF
Trigger: GAATCGAATTATTTCATGCCATATGCATGAGGTTTG...TCGGGCAAACTCACAAAATAGAGTTTCTAGGTAGCAGGTGTTTGCTTTGGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR GCA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCAATAATACTAACACTTaGTCATTTCTGAGCCGTACA +
Preference number: 2 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFNNTNT*SFLSRT
Trigger: TGTACGGCTCAGAAATGAGCAAGTGTTAGTATTATT...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR TCA 72 bp CTTAACACCAAGTCTGGCGAAGCCACGGCGCTCAGCTaGCTCACGAGCCTGTCCGCTCTGCACAGACCTGCT +
Preference number: 3 (lower is better)
Translates to: LNTKSGEATALS*LTSLSALHRPA
Trigger: AGCAGGTCTGTGCAGAGCGGACAGGCTCGTGAGTCAGCTGAGCGCCGTGGCTTCGCCAGACTTGGTGTTAAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR GCA 72 bp CAGCTGACTCACGAGCCTGTCCGCTCTGCACAGACCTaGTGGGAAGGCCTGGCTGCTCTCTGTGGAAAACAG +
Preference number: 3 (lower is better)
Translates to: QLTHEPVRSAQT*WEGLAALCGKQ
Trigger: CTGTTTTCCACAGAGAGCAGCCAGGCCTTCCCAGCAGGTCTGTGCAGAGCGGACAGGCTCGTGAGTCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR GCA 72 bp CTTCTCTCTCGATACATGAAGGGGCTTCCAGCGCTCTaGAGAGCAATGAGCCCTGCACGAGGGCAACGTAGG +
Preference number: 3 (lower is better)
Translates to: LLSRYMKGLPAL*RAMSPARGQRR
Trigger: CCTACGTTGCCCTCGTGCAGGGCTCATTGCTCTGCAGAGCGCTGGAAGCCCCTTCATGTATCGAGAGAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR CAA 90 bp CACAACACGAATGCCCTGTACAAAGGGAAGATATCTCCGCGGCCCTCCCACCTCCCTGCAGTGTTCCACTaGGGGTCTGGATTCCCACTT +
Preference number: 3 (lower is better)
Translates to: HNTNALYKGKISPRPSHLPAVFH*GSGFPL
Trigger: AAGTGGGAATCCAGACCCCAAGTGGAACACTGCAGG...GAGGTGGGAGGGCCGCGGAGATATCTTCCCTTTGTACAGGGCATTCGTGTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR GCA 72 bp TGTCCGCTCTGCACAGACCTGCTGGGAAGGCCTGGCTaGTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACA +
Preference number: 3 (lower is better)
Translates to: CPLCTDLLGRPG*SLWKTALVSKT
Trigger: TGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCCTTCCCAGCAGGTCTGTGCAGAGCGGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR GCA 72 bp AGCAGCTTCTACCCAGCTCTGGGTTCACAACACGAATaGCCTGTACAAAGGGAAGATATCTCCGCGGCCCTC +
Preference number: 3 (lower is better)
Translates to: SSFYPALGSQHE*PVQREDISAAL
Trigger: GAGGGCCGCGGAGATATCTTCCCTTTGTACAGGGCATTCGTGTTGTGAACCCAGAGCTGGGTAGAAGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR TCA 72 bp CCCGCCCTCGCCTTCCTCCTCCTAAGGTCTGTGGGTTaGTGTGTGCGTTTTGTCACTGCTATTGATACAACC +
Preference number: 3 (lower is better)
Translates to: PALAFLLLRSVG*CVRFVTAIDTT
Trigger: GGTTGTATCAATAGCAGTGACAAAACGCACACATCAACCCACAGACCTTAGGAGGAGGAAGGCGAGGGCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
3UTR TCA 72 bp AGCCTTGGCATCCTTCTTTCCTCCCTGAGTCAGAGCTaGAACAGCCAACTGTGCATCAGAGCTCTGTGCTCC +
Preference number: 3 (lower is better)
Translates to: SLGILLSSLSQS*NSQLCIRALCS
Trigger: GGAGCACAGAGCTCTGATGCACAGTTGGCTGTTTCAGCTCTGACTCAGGGAGGAAAGAAGGATGCCAAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR CCA 72 bp CTGCAGTGTTCCACTTGGGGTCTGGATTCCCACTTTTaGGATCCTTGGGAAGAATGTGGGAACTGGGTCAGC +
Preference number: 3 (lower is better)
Translates to: LQCSTWGLDSHF*DPWEECGNWVS
Trigger: GCTGACCCAGTTCCCACATTCTTCCCAAGGATCCCAAAAGTGGGAATCCAGACCCCAAGTGGAACACTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR CAA 90 bp CACAACACGAATGCCCTGTACAAAGGGAAGATATCTCCGCGGCCCTCCCACCTCCATCAACAAAGGAGGTaGCTTAACACCAAGTCTGGC +
Preference number: 3 (lower is better)
Translates to: HNTNALYKGKISPRPSHLHQQRR*LNTKSG
Trigger: GCCAGACTTGGTGTTAAGCAACCTCCTTTGTTGATG...GAGGTGGGAGGGCCGCGGAGATATCTTCCCTTTGTACAGGGCATTCGTGTTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR GCA 72 bp CAGGACACCCTGACTGATCCCTGGAATCCTTCTCTGTaGCACTCTGGTATTAGACTTCTCCGCTGTGACAGA +
Preference number: 3 (lower is better)
Translates to: QDTLTDPWNPSL*HSGIRLLRCDR
Trigger: TCTGTCACAGCGGAGAAGTCTAATACCAGAGTGGCACAGAGAAGGATTCCAGGGATCAGTCAGGGTGTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR CAA 90 bp TGGGAAGGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACCCTGCAGTGTTCCACTaGGGGTCTGGATTCCCACTT +
Preference number: 3 (lower is better)
Translates to: WEGLAALCGKQPWFQKHYPAVFH*GSGFPL
Trigger: AAGTGGGAATCCAGACCCCAAGTGGAACACTGCAGG...GTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCCTTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR CAA 90 bp GGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACACTGGGCCTAAGGTCTGTGGGTaGATGTGTGCGTTTTGTCAC +
Preference number: 3 (lower is better)
Translates to: GLAALCGKQPWFQKHYTGPKVCG*MCAFCH
Trigger: GTGACAAAACGCACACATCAACCCACAGACCTTAGG...CCCAGTGTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR CCA 72 bp TCCACTTGGGGTCTGGATTCCCACTTTTGGGATCCTTaGGAAGAATGTGGGAACTGGGTCAGCTATGCTCAT +
Preference number: 3 (lower is better)
Translates to: STWGLDSHFWDP*EECGNWVSYAH
Trigger: ATGAGCATAGCTGACCCAGTTCCCACATTCTTCCCAAGGATCCCAAAAGTGGGAATCCAGACCCCAAGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR CCA 72 bp TGGAACCACAGATTCGTAAGCCTGCAGTGTTCCACTTaGGGTCTGGATTCCCACTTTTGGGATCCTTGGGAA +
Preference number: 3 (lower is better)
Translates to: WNHRFVSLQCST*GLDSHFWDPWE
Trigger: TTCCCAAGGATCCCAAAAGTGGGAATCCAGACCCCAAGTGGAACACTGCAGGCTTACGAATCTGTGGTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR CAA 90 bp TGGGAAGGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACCCACTTTTGGGATCCTaGGGAAGAATGTGGGAACTG +
Preference number: 3 (lower is better)
Translates to: WEGLAALCGKQPWFQKHYPLLGS*GRMWEL
Trigger: CAGTTCCCACATTCTTCCCAAGGATCCCAAAAGTGG...GTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCCTTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR CAA 90 bp TACCTAGAAACTCTATTTTGTGAGTTTGCCCGACCTCAGGTGCTGGGTTGGAGTCCACTTTTGGGATCCTaGGGAAGAATGTGGGAACTG +
Preference number: 3 (lower is better)
Translates to: YLETLFCEFARPQVLGWSPLLGS*GRMWEL
Trigger: CAGTTCCCACATTCTTCCCAAGGATCCCAAAAGTGG...ACTCCAACCCAGCACCTGAGGTCGGGCAAACTCACAAAATAGAGTTTCTAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR TCA 72 bp CTCCTAACCATCTGGCAATGCCTGGAGAATGGAGATTaGGTGTGTGTGTGTGTGCTTGTGAGAGAGAGAGAA +
Preference number: 3 (lower is better)
Translates to: LLTIWQCLENGD*VCVCVLVRERE
Trigger: TTCTCTCTCTCTCACAAGCACACACACACACACTCAATCTCCATTCTCCAGGCATTGCCAGATGGTTAGGAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR TCA 72 bp ATCATCTCTACTCAGATAGGTACAGGACACCCTGACTaGTCCCTGGAATCCTTCTCTGTGCCACTCTGGTAT +
Preference number: 3 (lower is better)
Translates to: IISTQIGTGHPD*SLESFSVPLWY
Trigger: ATACCAGAGTGGCACAGAGAAGGATTCCAGGGATCAGTCAGGGTGTCCTGTACCTATCTGAGTAGAGATGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR TCA 72 bp TTGAATCATCTCTACTCAGATAGGTACAGGACACCCTaGCTGATCCCTGGAATCCTTCTCTGTGCCACTCTG +
Preference number: 3 (lower is better)
Translates to: LNHLYSDRYRTP*LIPGILLCATL
Trigger: CAGAGTGGCACAGAGAAGGATTCCAGGGATCAGTCAGGGTGTCCTGTACCTATCTGAGTAGAGATGATTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR TCA 72 bp TTTGCCCGACCTCAGGTGCTGGGTTGGAGTGGTATTTaGAACCATACTACTCCGGGTTTGCCAACAAATTTC +
Preference number: 3 (lower is better)
Translates to: FARPQVLGWSGI*NHTTPGLPTNF
Trigger: GAAATTTGTTGGCAAACCCGGAGTAGTATGGTTTCAAATACCACTCCAACCCAGCACCTGAGGTCGGGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR CCA 72 bp TCTGGATTCCCACTTTTGGGATCCTTGGGAAGAATGTaGGAACTGGGTCAGCTATGCTCATCTGAGATTCCA +
Preference number: 3 (lower is better)
Translates to: SGFPLLGSLGRM*ELGQLCSSEIP
Trigger: TGGAATCTCAGATGAGCATAGCTGACCCAGTTCCCACATTCTTCCCAAGGATCCCAAAAGTGGGAATCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR CCA 72 bp CTCACACTGAATACAAAAGCAGCTTCTACCCAGCTCTaGGTTCACAACACGAATGCCCTGTACAAAGGGAAG +
Preference number: 3 (lower is better)
Translates to: LTLNTKAASTQL*VHNTNALYKGK
Trigger: CTTCCCTTTGTACAGGGCATTCGTGTTGTGAACCCAGAGCTGGGTAGAAGCTGCTTTTGTATTCAGTGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR CCA 72 bp CTCACTTCTCCTAACCATCTGGCAATGCCTGGAGAATaGAGATTGAGTGTGTGTGTGTGTGCTTGTGAGAGA +
Preference number: 3 (lower is better)
Translates to: LTSPNHLAMPGE*RLSVCVCACER
Trigger: TCTCTCACAAGCACACACACACACACTCAATCTCCATTCTCCAGGCATTGCCAGATGGTTAGGAGAAGTGAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR CAA 90 bp AAAACCAAAGCAAACACCTGCTACCTAGAAACTCTATTTTGTGAGTTTGCCCGACGCTGTGACAGAGCCTaGGCATCCTTCTTTCCTCCC +
Preference number: 3 (lower is better)
Translates to: KTKANTCYLETLFCEFARRCDRA*ASFFPP
Trigger: GGGAGGAAAGAAGGATGCCAAGGCTCTGTCACAGCG...TCGGGCAAACTCACAAAATAGAGTTTCTAGGTAGCAGGTGTTTGCTTTGGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR CAA 90 bp GGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACACTGGGGTTGATGTGTGCGTTTaGTCACTGCTATTGATACAA +
Preference number: 3 (lower is better)
Translates to: GLAALCGKQPWFQKHYTGVDVCV*SLLLIQ
Trigger: TTGTATCAATAGCAGTGACAAAACGCACACATCAAC...CCCAGTGTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR CAA 90 bp GTCATGGTAGCTGCTGACCTCAGTTTTGACCGATTTGGCATCAGAAGGCAAATTCATCAACAAAGGAGGTaGCTTAACACCAAGTCTGGC +
Preference number: 3 (lower is better)
Translates to: VMVAADLSFDRFGIRRQIHQQRR*LNTKSG
Trigger: GCCAGACTTGGTGTTAAGCAACCTCCTTTGTTGATG...AATTTGCCTTCTGATGCCAAATCGGTCAAAACTGAGGTCAGCAGCTACCATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR CAA 90 bp AAAACCAAAGCAAACACCTGCTACCTAGAAACTCTATTTTGTGAGTTTGCCCGAGATGTGGTTCATTCTTaGAGCTCAGAGGGGCCCCGA +
Preference number: 3 (lower is better)
Translates to: KTKANTCYLETLFCEFARDVVHS*SSEGPR
Trigger: TCGGGGCCCCTCTGAGCTCAAAGAATGAACCACATC...TCGGGCAAACTCACAAAATAGAGTTTCTAGGTAGCAGGTGTTTGCTTTGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR CAA 90 bp CTGATCCCTGGAATCCTTCTCTGTGCCACTCTGGTATTAGACTTCTCCGCTGTGAGTACACTTCTACTGTaGTCAAAGTCGTCTGTAAAC +
Preference number: 3 (lower is better)
Translates to: LIPGILLCATLVLDFSAVSTLLL*SKSSVN
Trigger: GTTTACAGACGACTTTGACAACAGTAGAAGTGTACT...CACAGCGGAGAAGTCTAATACCAGAGTGGCACAGAGAAGGATTCCAGGGATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR TCA 72 bp CTGTTGTCAAAGTCGTCTGTAAACACCACCTCACACTaGATACAAAAGCAGCTTCTACCCAGCTCTGGGTTC +
Preference number: 3 (lower is better)
Translates to: LLSKSSVNTTSH*IQKQLLPSSGF
Trigger: GAACCCAGAGCTGGGTAGAAGCTGCTTTTGTATTCAGTGTGAGGTGGTGTTTACAGACGACTTTGACAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR TCA 72 bp TGGAGAATGGAGATTGAGTGTGTGTGTGTGTGCTTGTaGGAGAGAGAGAAGGAAGAAGAGGGAGAAAGAGAG +
Preference number: 3 (lower is better)
Translates to: WRMEIECVCVCL*EREKEEEGERE
Trigger: CTCTCTTTCTCCCTCTTCTTCCTTCTCTCTCTCTCACAAGCACACACACACACACTCAATCTCCATTCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR CCA 72 bp AAACTCTATTTTGTGAGTTTGCCCGACCTCAGGTGCTaGGTTGGAGTGGTATTTGAAACCATACTACTCCGG +
Preference number: 3 (lower is better)
Translates to: KLYFVSLPDLRC*VGVVFETILLR
Trigger: CCGGAGTAGTATGGTTTCAAATACCACTCCAACCCAGCACCTGAGGTCGGGCAAACTCACAAAATAGAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR CCA 72 bp CTATATTTAAAAGAAAGAAGGGCTTTGCCCAAACTGTaGCCATCACATAGCTCTAAGCAGACGCCCAGAGGA +
Preference number: 3 (lower is better)
Translates to: LYLKERRALPKL*PSHSSKQTPRG
Trigger: TCCTCTGGGCGTCTGCTTAGAGCTATGTGATGGCCACAGTTTGGGCAAAGCCCTTCTTTCTTTTAAATATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR TCA 72 bp TTCTTTGACTATACTGCACTATTTTCACTCGTCCTCTaGAGCTGCCAGGGGAAGATTGTGCAATTTCCTGGA +
Preference number: 3 (lower is better)
Translates to: FFDYTALFSLVL*SCQGKIVQFPG
Trigger: TCCAGGAAATTGCACAATCTTCCCCTGGCAGCTTCAGAGGACGAGTGAAAATAGTGCAGTATAGTCAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR TCA 72 bp CTGGATGAGGAATGGCTAGAAGGGAGATCATGTGTTTaGTTGCTTGCAGAACAGGATAAAGGATTGTCTCCT +
Preference number: 3 (lower is better)
Translates to: LDEEWLEGRSCV*LLAEQDKGLSP
Trigger: AGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATGATCTCCCTTCTAGCCATTCCTCATCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR TCA 72 bp TTACATGTAGGAGGCTGGAAATGCCCATGTACTGGATaGGGAATGGCTAGAAGGGAGATCATGTGTTTGATT +
Preference number: 3 (lower is better)
Translates to: LHVGGWKCPCTG*GMARREIMCLI
Trigger: AATCAAACACATGATCTCCCTTCTAGCCATTCCTCATCCAGTACATGGGCATTTCCAGCCTCCTACATGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR TCA 72 bp TCCCTGAGAGCTTCCTGCCAAGAGAAATCAGCATGCTaGTTCACCATCGTGGAAGCCCATTTTTATGTAATT +
Preference number: 3 (lower is better)
Translates to: SLRASCQEKSAC*FTIVEAHFYVI
Trigger: AATTACATAAAAATGGGCTTCCACGATGGTGAATCAGCATGCTGATTTCTCTTGGCAGGAAGCTCTCAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR GCA 72 bp ACATTGGGTTACCATTCTAGAAACCTTTCTCAGGTCTaGAATGTTGACTCACACATTAATGCTGGGAGAGGC +
Preference number: 3 (lower is better)
Translates to: TLGYHSRNLSQV*NVDSHINAGRG
Trigger: GCCTCTCCCAGCATTAATGTGTGAGTCAACATTGCAGACCTGAGAAAGGTTTCTAGAATGGTAACCCAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR CAA 90 bp GAGTGGTATTTGAAACCATACTACTCCGGGTTTGCCAACAAATTTCAAAGCTTCTCTGGATTCCCACTTTaGGGATCCTTGGGAAGAATG +
Preference number: 3 (lower is better)
Translates to: EWYLKPYYSGFANKFQSFSGFPL*GSLGRM
Trigger: CATTCTTCCCAAGGATCCCAAAAGTGGGAATCCAGA...GAAGCTTTGAAATTTGTTGGCAAACCCGGAGTAGTATGGTTTCAAATACCACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR CAA 90 bp AAAACCAAAGCAAACACCTGCTACCTAGAAACTCTATTTTGTGAGTTTGCCCGATCTGGATTCCCACTTTaGGGATCCTTGGGAAGAATG +
Preference number: 3 (lower is better)
Translates to: KTKANTCYLETLFCEFARSGFPL*GSLGRM
Trigger: CATTCTTCCCAAGGATCCCAAAAGTGGGAATCCAGA...TCGGGCAAACTCACAAAATAGAGTTTCTAGGTAGCAGGTGTTTGCTTTGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR GCA 72 bp GTTGGAGTGGTATTTGAAACCATACTACTCCGGGTTTaGCAACAAATTTCAAAGCTTCCTTGGTTACCTTCC +
Preference number: 3 (lower is better)
Translates to: VGVVFETILLRV*QQISKLPWLPS
Trigger: GGAAGGTAACCAAGGAAGCTTTGAAATTTGTTGGCAAACCCGGAGTAGTATGGTTTCAAATACCACTCCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR GCA 72 bp CAGTGCCTTTGGCAAAGATGTGGACACTGTTTTAGATaGGAGTATGATACATGCCCTTTGCTTACAAAGCAA +
Preference number: 3 (lower is better)
Translates to: QCLWQRCGHCFR*EYDTCPLLTKQ
Trigger: TTGCTTTGTAAGCAAAGGGCATGTATCATACTCGCATCTAAAACAGTGTCCACATCTTTGCCAAAGGCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR CAA 90 bp AAAACCAAAGCAAACACCTGCTACCTAGAAACTCTATTTTGTGAGTTTGCCCGACAAGCCCTATTTTCTTaGAGAAGGTGCCATTCAGCA +
Preference number: 3 (lower is better)
Translates to: KTKANTCYLETLFCEFARQALFS*RRCHSA
Trigger: TGCTGAATGGCACCTTCTCAAAGAAAATAGGGCTTG...TCGGGCAAACTCACAAAATAGAGTTTCTAGGTAGCAGGTGTTTGCTTTGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR CAA 90 bp GTCATGGTAGCTGCTGACCTCAGTTTTGACCGATTTGGCATCAGAAGGCAAATTGAAGTACTGGGACACTaGAATAAGCTTTCACATATT +
Preference number: 3 (lower is better)
Translates to: VMVAADLSFDRFGIRRQIEVLGH*NKLSHI
Trigger: AATATGTGAAAGCTTATTCAAGTGTCCCAGTACTTC...AATTTGCCTTCTGATGCCAAATCGGTCAAAACTGAGGTCAGCAGCTACCATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR CCA 72 bp CTTTGCTTACAAAGCAAATATACACCCATCTGTTTTTaGACTGCGGTTTCTCTATCCACCAGAGAGCATCTT +
Preference number: 3 (lower is better)
Translates to: LCLQSKYTPICF*TAVSLSTREHL
Trigger: AAGATGCTCTCTGGTGGATAGAGAAACCGCAGTCCAAAAACAGATGGGTGTATATTTGCTTTGTAAGCAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR CAA 90 bp AAAACCAAAGCAAACACCTGCTACCTAGAAACTCTATTTTGTGAGTTTGCCCGAGTAATGACAAGCCCTTaGAGAAATGCACGTGTAACT +
Preference number: 3 (lower is better)
Translates to: KTKANTCYLETLFCEFARVMTSP*RNARVT
Trigger: AGTTACACGTGCATTTCTCAAAGGGCTTGTCATTAC...TCGGGCAAACTCACAAAATAGAGTTTCTAGGTAGCAGGTGTTTGCTTTGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR CAA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCCTGCTGACCTCAGTTTaGACCGATTTGGCATCAGAA +
Preference number: 3 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFLLTSV*TDLASE
Trigger: TTCTGATGCCAAATCGGTCAAAACTGAGGTCAGCAG...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR CAA 90 bp GAGTGGTATTTGAAACCATACTACTCCGGGTTTGCCAACAAATTTCAAAGCTTCGTTGATGTGTGCGTTTaGTCACTGCTATTGATACAA +
Preference number: 3 (lower is better)
Translates to: EWYLKPYYSGFANKFQSFVDVCV*SLLLIQ
Trigger: TTGTATCAATAGCAGTGACAAAACGCACACATCAAC...GAAGCTTTGAAATTTGTTGGCAAACCCGGAGTAGTATGGTTTCAAATACCACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR CAA 90 bp GAGTGGTATTTGAAACCATACTACTCCGGGTTTGCCAACAAATTTCAAAGCTTCTCAGTTTTGACCGATTaGGCATCAGAAGGCAAATTA +
Preference number: 3 (lower is better)
Translates to: EWYLKPYYSGFANKFQSFSVLTD*ASEGKL
Trigger: TAATTTGCCTTCTGATGCCAAATCGGTCAAAACTGA...GAAGCTTTGAAATTTGTTGGCAAACCCGGAGTAGTATGGTTTCAAATACCACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR GCA 72 bp AGATGTGGACACTGTTTTAGATGCGAGTATGATACATaGCCTTTGCTTACAAAGCAAATATACACCCATCTG +
Preference number: 3 (lower is better)
Translates to: RCGHCFRCEYDT*PLLTKQIYTHL
Trigger: CAGATGGGTGTATATTTGCTTTGTAAGCAAAGGGCATGTATCATACTCGCATCTAAAACAGTGTCCACATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR CAA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAGTTGATGTGTGCGTTTaGTCACTGCTATTGATACAA +
Preference number: 3 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRVDVCV*SLLLIQ
Trigger: TTGTATCAATAGCAGTGACAAAACGCACACATCAAC...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
3UTR-3UTR CAA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTGTTGATGTGTGCGTTTaGTCACTGCTATTGATACAA +
Preference number: 3 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSVDVCV*SLLLIQ
Trigger: TTGTATCAATAGCAGTGACAAAACGCACACATCAAC...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
3UTR-3UTR CAA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCGCAAAGTGGCTAATCTaGAAATGTCTGCAAACCTCA +
Preference number: 3 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFAKWLI*KCLQTS
Trigger: TGAGGTTTGCAGACATTTCAAGATTAGCCACTTTGC...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR TCA 72 bp AACTTCAGGTTCCTCATCCTAAATTCATTGCTTCTTTaGCTATACTGCACTATTTTCACTCGTCCTCTGAAG +
Preference number: 3 (lower is better)
Translates to: NFRFLILNSLLL*LYCTIFTRPLK
Trigger: CTTCAGAGGACGAGTGAAAATAGTGCAGTATAGTCAAAGAAGCAATGAATTTAGGATGAGGAACCTGAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR TCA 72 bp GATGTGTGCCTAATAATACTAACACTTGCTCATTTCTaGGCCGTACAACAAAACACTGTGCAGTTACAAACT +
Preference number: 3 (lower is better)
Translates to: DVCLIILTLAHF*AVQQNTVQLQT
Trigger: AGTTTGTAACTGCACAGTGTTTTGTTGTACGGCTCAGAAATGAGCAAGTGTTAGTATTATTAGGCACACATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR TCA 72 bp ACTACAGATCTTCACTTGCACAGAAAACTATGTTTATaGACTCTCCAGGCCCTCCAGATACTTCTTTTACTA +
Preference number: 3 (lower is better)
Translates to: TTDLHLHRKLCL*TLQALQILLLL
Trigger: TAGTAAAAGAAGTATCTGGAGGGCCTGGAGAGTTCATAAACATAGTTTTCTGTGCAAGTGAAGATCTGTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR GCA 72 bp CTTACAAAGCAAATATACACCCATCTGTTTTTGGACTaGGGTTTCTCTATCCACCAGAGAGCATCTTTAAAT +
Preference number: 3 (lower is better)
Translates to: LTKQIYTHLFLD*GFSIHQRASLN
Trigger: ATTTAAAGATGCTCTCTGGTGGATAGAGAAACCGCAGTCCAAAAACAGATGGGTGTATATTTGCTTTGTAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR GCA 72 bp GACACTGTTTTAGATGCGAGTATGATACATGCCCTTTaGTTACAAAGCAAATATACACCCATCTGTTTTTGG +
Preference number: 3 (lower is better)
Translates to: DTVLDASMIHAL*LQSKYTPICFW
Trigger: CCAAAAACAGATGGGTGTATATTTGCTTTGTAAGCAAAGGGCATGTATCATACTCGCATCTAAAACAGTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR CAA 90 bp GACCTAGAGTCTTGGATTTGTTCCTTTTCTGCTATTATTAGCATCACAAAAGGATTTCTTTCTTGTTCTTaGGTTGAATGTGGGCCCAAA +
Preference number: 3 (lower is better)
Translates to: DLESWICSFSAIISITKGFLSCS*VECGPK
Trigger: TTTGGGCCCACATTCAACCAAAGAACAAGAAAGAAA...TCCTTTTGTGATGCTAATAATAGCAGAAAAGGAACAAATCCAAGACTCTAGGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR-3UTR CAA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCTTGTTGCACGTGGTATaGGAGCAAAATATTCTTTCA +
Preference number: 3 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFLLHVV*EQNILS
Trigger: TGAAAGAATATTTTGCTCCAATACCACGTGCAACAA...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp CACAACACGAATGCCCTGTACAAAGGGAAGATATCTCCGCGGCCCTCCCACCTCTGCCCGGTGCGCGGGTaGCGTCCGCTCCACCTTCCC +
Preference number: 4 (lower is better)
Translates to: HNTNALYKGKISPRPSHLCPVRG*RPLHLP
Trigger: GGGAAGGTGGAGCGGACGCCACCCGCGCACCGGGCA...GAGGTGGGAGGGCCGCGGAGATATCTTCCCTTTGTACAGGGCATTCGTGTTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676153.1
CDS-3UTR CCA 90 bp AACAAAGGAGGTTGCTTAACACCAAGTCTGGCGAAGCCACGGCGCTCAGCTGACCCGCGATGGCACCGATaGCCCCGCGGTGTGCGCTCC +
Preference number: 4 (lower is better)
Translates to: NKGGCLTPSLAKPRRSADPRWHR*PRGVRS
Trigger: GGAGCGCACACCGCGGGGCCATCGGTGCCATCGCGG...GTCAGCTGAGCGCCGTGGCTTCGCCAGACTTGGTGTTAAGCAACCTCCTTTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676153.1
CDS-3UTR TCA 90 bp CACAACACGAATGCCCTGTACAAAGGGAAGATATCTCCGCGGCCCTCCCACCTCCGCTCTGCAGAGCAATaGGCCCTGCACGAGGGCAAC +
Preference number: 4 (lower is better)
Translates to: HNTNALYKGKISPRPSHLRSAEQ*ALHEGN
Trigger: GTTGCCCTCGTGCAGGGCTCATTGCTCTGCAGAGCG...GAGGTGGGAGGGCCGCGGAGATATCTTCCCTTTGTACAGGGCATTCGTGTTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp CACAACACGAATGCCCTGTACAAAGGGAAGATATCTCCGCGGCCCTCCCACCTCAGCAGGGCGAGGCATTaGCTCACCTGGGAAGCGCAA +
Preference number: 4 (lower is better)
Translates to: HNTNALYKGKISPRPSHLSRARH*LTWEAQ
Trigger: TTGCGCTTCCCAGGTGAGGCAATGCCTCGCCCTGCT...GAGGTGGGAGGGCCGCGGAGATATCTTCCCTTTGTACAGGGCATTCGTGTTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255380.8
CDS-3UTR TCA 90 bp CACAACACGAATGCCCTGTACAAAGGGAAGATATCTCCGCGGCCCTCCCACCTCACTTGCCAGACGGTATaGCCTCCCAGAGGGTCATCG +
Preference number: 4 (lower is better)
Translates to: HNTNALYKGKISPRPSHLTCQTV*PPRGSS
Trigger: CGATGACCCTCTGGGAGGTCATACCGTCTGGCAAGT...GAGGTGGGAGGGCCGCGGAGATATCTTCCCTTTGTACAGGGCATTCGTGTTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp TGCAGTGTTCCACTTGGGGTCTGGATTCCCACTTTTGGGATCCTTGGGAAGAATGCCACGGCGCTCAGCTaGCTCACGAGCCTGTCCGCT +
Preference number: 4 (lower is better)
Translates to: CSVPLGVWIPTFGILGKNATALS*LTSLSA
Trigger: AGCGGACAGGCTCGTGAGTCAGCTGAGCGCCGTGGC...ATTCTTCCCAAGGATCCCAAAAGTGGGAATCCAGACCCCAAGTGGAACACTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp TGCAGTGTTCCACTTGGGGTCTGGATTCCCACTTTTGGGATCCTTGGGAAGAATCGCCCTGTGCTCCCCTaGACGCTCCGGCCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: CSVPLGVWIPTFGILGKNRPVLP*TLRPFL
Trigger: CAGAAAGGGCCGGAGCGTGCAGGGGAGCACAGGGCG...ATTCTTCCCAAGGATCCCAAAAGTGGGAATCCAGACCCCAAGTGGAACACTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676153.1
CDS-3UTR GCA 90 bp GTCTGTAAACACCACCTCACACTGAATACAAAAGCAGCTTCTACCCAGCTCTGGGATGGCCCCGCGGTGTaGGCTCCGGGGTCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: VCKHHLTLNTKAASTQLWDGPAV*APGSES
Trigger: GCTCTCAGACCCCGGAGCGCACACCGCGGGGCCATC...CCAGAGCTGGGTAGAAGCTGCTTTTGTATTCAGTGTGAGGTGGTGTTTACAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676153.1
CDS-3UTR CCA 90 bp GGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACACTGGGTGGTGGTGGCGGTCGTaGCTACTGCTGGCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: GLAALCGKQPWFQKHYTGWWWRS*LLLAAP
Trigger: AGGAGCGGCCAGCAGTAGCCACGACCGCCACCACCA...CCCAGTGTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676153.1
CDS-3UTR TCA 90 bp AACAAAGGAGGTTGCTTAACACCAAGTCTGGCGAAGCCACGGCGCTCAGCTGACTCCAGCTCTTGGTTGTaGACCAGAAGTGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: NKGGCLTPSLAKPRRSADSSSWL*TRSGSG
Trigger: GCCGCTGCCACTTCTGGTTCACAACCAAGAGCTGGA...GTCAGCTGAGCGCCGTGGCTTCGCCAGACTTGGTGTTAAGCAACCTCCTTTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp AACAAAGGAGGTTGCTTAACACCAAGTCTGGCGAAGCCACGGCGCTCAGCTGACCTGGGAAGGCCTGGCTaGTCTCTGTGGAAAACAGCC +
Preference number: 4 (lower is better)
Translates to: NKGGCLTPSLAKPRRSADLGRPG*SLWKTA
Trigger: GGCTGTTTTCCACAGAGAGCAGCCAGGCCTTCCCAG...GTCAGCTGAGCGCCGTGGCTTCGCCAGACTTGGTGTTAAGCAACCTCCTTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp TACCTAGAAACTCTATTTTGTGAGTTTGCCCGACCTCAGGTGCTGGGTTGGAGTTCTTCCCAGAAGCGCTaGTGCGGCCCCGGCGGACTG +
Preference number: 4 (lower is better)
Translates to: YLETLFCEFARPQVLGWSSSQKR*CGPGGL
Trigger: CAGTCCGCCGGGGCCGCAGCAGCGCTTCTGGGAAGA...ACTCCAACCCAGCACCTGAGGTCGGGCAAACTCACAAAATAGAGTTTCTAGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676153.1
CDS-3UTR CCA 90 bp TACCTAGAAACTCTATTTTGTGAGTTTGCCCGACCTCAGGTGCTGGGTTGGAGTCAGCTGCGCTCCAGGTaGCTGTCCCACGCCGGTCTC +
Preference number: 4 (lower is better)
Translates to: YLETLFCEFARPQVLGWSQLRSR*LSHAGL
Trigger: GAGACCGGCGTGGGACAGCCACCTGGAGCGCAGCTG...ACTCCAACCCAGCACCTGAGGTCGGGCAAACTCACAAAATAGAGTTTCTAGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676153.1
CDS-3UTR TCA 90 bp CACAACACGAATGCCCTGTACAAAGGGAAGATATCTCCGCGGCCCTCCCACCTCCCGTTAAGAAAGCGATaGAGACCACTTGCCAGACGG +
Preference number: 4 (lower is better)
Translates to: HNTNALYKGKISPRPSHLPLRKR*RPLARR
Trigger: CCGTCTGGCAAGTGGTCTTCATCGCTTTCTTAACGG...GAGGTGGGAGGGCCGCGGAGATATCTTCCCTTTGTACAGGGCATTCGTGTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp AACAAAGGAGGTTGCTTAACACCAAGTCTGGCGAAGCCACGGCGCTCAGCTGACTCGGGTGCGCGCTTGTaGAAAATGACCGACTGTCTC +
Preference number: 4 (lower is better)
Translates to: NKGGCLTPSLAKPRRSADSGARL*KMTDCL
Trigger: GAGACAGTCGGTCATTTTTCACAAGCGCGCACCCGA...GTCAGCTGAGCGCCGTGGCTTCGCCAGACTTGGTGTTAAGCAACCTCCTTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp CACAACACGAATGCCCTGTACAAAGGGAAGATATCTCCGCGGCCCTCCCACCTCTTCTCTCTCGATACATaGAGGGGCTTCCAGCGCTCT +
Preference number: 4 (lower is better)
Translates to: HNTNALYKGKISPRPSHLFSLDT*RGFQRS
Trigger: AGAGCGCTGGAAGCCCCTTCATGTATCGAGAGAGAA...GAGGTGGGAGGGCCGCGGAGATATCTTCCCTTTGTACAGGGCATTCGTGTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp CACAACACGAATGCCCTGTACAAAGGGAAGATATCTCCGCGGCCCTCCCACCTCAGGTACAGGACACCCTaGCTGATCCCTGGAATCCTT +
Preference number: 4 (lower is better)
Translates to: HNTNALYKGKISPRPSHLRYRTP*LIPGIL
Trigger: AAGGATTCCAGGGATCAGTCAGGGTGTCCTGTACCT...GAGGTGGGAGGGCCGCGGAGATATCTTCCCTTTGTACAGGGCATTCGTGTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp CACAACACGAATGCCCTGTACAAAGGGAAGATATCTCCGCGGCCCTCCCACCTCGAAGTTCGTAACTGCTaGAGCTTCGAGAACTGCCCG +
Preference number: 4 (lower is better)
Translates to: HNTNALYKGKISPRPSHLEVRNC*SFENCP
Trigger: CGGGCAGTTCTCGAAGCTGCAGCAGTTACGAACTTC...GAGGTGGGAGGGCCGCGGAGATATCTTCCCTTTGTACAGGGCATTCGTGTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp TGGGAAGGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACCGCTCTGCACAGACCTaGTGGGAAGGCCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: WEGLAALCGKQPWFQKHYRSAQT*WEGLAA
Trigger: AGCAGCCAGGCCTTCCCAGCAGGTCTGTGCAGAGCG...GTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCCTTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp CTGATCCCTGGAATCCTTCTCTGTGCCACTCTGGTATTAGACTTCTCCGCTGTGGGGCTTCCAGCGCTCTaGAGAGCAATGAGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: LIPGILLCATLVLDFSAVGLPAL*RAMSPA
Trigger: TGCAGGGCTCATTGCTCTGCAGAGCGCTGGAAGCCC...CACAGCGGAGAAGTCTAATACCAGAGTGGCACAGAGAAGGATTCCAGGGATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp AACAAAGGAGGTTGCTTAACACCAAGTCTGGCGAAGCCACGGCGCTCAGCTGACCCATCTGCTCGGAGCTaGGTTTCCAGCTCTTGGTTG +
Preference number: 4 (lower is better)
Translates to: NKGGCLTPSLAKPRRSADPSARS*VSSSWL
Trigger: CAACCAAGAGCTGGAAACCCAGCTCCGAGCAGATGG...GTCAGCTGAGCGCCGTGGCTTCGCCAGACTTGGTGTTAAGCAACCTCCTTTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp CTGATCCCTGGAATCCTTCTCTGTGCCACTCTGGTATTAGACTTCTCCGCTGTGTCGTCCACGCTCTTCTaGGCCTGCAGCTTGTCGGCT +
Preference number: 4 (lower is better)
Translates to: LIPGILLCATLVLDFSAVSSTLF*ACSLSA
Trigger: AGCCGACAAGCTGCAGGCCCAGAAGAGCGTGGACGA...CACAGCGGAGAAGTCTAATACCAGAGTGGCACAGAGAAGGATTCCAGGGATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp CTGATCCCTGGAATCCTTCTCTGTGCCACTCTGGTATTAGACTTCTCCGCTGTGTTGAGGATGGTGCTGTaGCCCGGAAGCTTGAGCACG +
Preference number: 4 (lower is better)
Translates to: LIPGILLCATLVLDFSAVLRMVL*PGSLST
Trigger: CGTGCTCAAGCTTCCGGGTCACAGCACCATCCTCAA...CACAGCGGAGAAGTCTAATACCAGAGTGGCACAGAGAAGGATTCCAGGGATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp AACAAAGGAGGTTGCTTAACACCAAGTCTGGCGAAGCCACGGCGCTCAGCTGACTCCCTGAGTCAGAGCTaGAACAGCCAACTGTGCATC +
Preference number: 4 (lower is better)
Translates to: NKGGCLTPSLAKPRRSADSLSQS*NSQLCI
Trigger: GATGCACAGTTGGCTGTTTCAGCTCTGACTCAGGGA...GTCAGCTGAGCGCCGTGGCTTCGCCAGACTTGGTGTTAAGCAACCTCCTTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp AACAAAGGAGGTTGCTTAACACCAAGTCTGGCGAAGCCACGGCGCTCAGCTGACAGGTACAGGACACCCTaGCTGATCCCTGGAATCCTT +
Preference number: 4 (lower is better)
Translates to: NKGGCLTPSLAKPRRSADRYRTP*LIPGIL
Trigger: AAGGATTCCAGGGATCAGTCAGGGTGTCCTGTACCT...GTCAGCTGAGCGCCGTGGCTTCGCCAGACTTGGTGTTAAGCAACCTCCTTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp CACAACACGAATGCCCTGTACAAAGGGAAGATATCTCCGCGGCCCTCCCACCTCTTTTCACTCGTCCTCTaGAGCTGCCAGGGGAAGATT +
Preference number: 4 (lower is better)
Translates to: HNTNALYKGKISPRPSHLFSLVL*SCQGKI
Trigger: AATCTTCCCCTGGCAGCTTCAGAGGACGAGTGAAAA...GAGGTGGGAGGGCCGCGGAGATATCTTCCCTTTGTACAGGGCATTCGTGTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp CACAACACGAATGCCCTGTACAAAGGGAAGATATCTCCGCGGCCCTCCCACCTCCGCCCAGAGGAAGTTTaGAGTGTTACATGTAGGAGG +
Preference number: 4 (lower is better)
Translates to: HNTNALYKGKISPRPSHLRPEEV*SVTCRR
Trigger: CCTCCTACATGTAACACTTCAAACTTCCTCTGGGCG...GAGGTGGGAGGGCCGCGGAGATATCTTCCCTTTGTACAGGGCATTCGTGTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp CACAACACGAATGCCCTGTACAAAGGGAAGATATCTCCGCGGCCCTCCCACCTCTCACAGACATTTCCCTaGGAGCTTCCTGCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: HNTNALYKGKISPRPSHLSQTFP*ELPAKR
Trigger: TCTCTTGGCAGGAAGCTCTCAGGGAAATGTCTGTGA...GAGGTGGGAGGGCCGCGGAGATATCTTCCCTTTGTACAGGGCATTCGTGTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp CTGATCCCTGGAATCCTTCTCTGTGCCACTCTGGTATTAGACTTCTCCGCTGTGTCCTCCTCAGGCACCTaGAGGTTGTCCGATGAGGGT +
Preference number: 4 (lower is better)
Translates to: LIPGILLCATLVLDFSAVSSSGT*RLSDEG
Trigger: ACCCTCATCGGACAACCTGCAGGTGCCTGAGGAGGA...CACAGCGGAGAAGTCTAATACCAGAGTGGCACAGAGAAGGATTCCAGGGATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp TACCTAGAAACTCTATTTTGTGAGTTTGCCCGACCTCAGGTGCTGGGTTGGAGTCGCTCTGCACAGACCTaGTGGGAAGGCCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: YLETLFCEFARPQVLGWSRSAQT*WEGLAA
Trigger: AGCAGCCAGGCCTTCCCAGCAGGTCTGTGCAGAGCG...ACTCCAACCCAGCACCTGAGGTCGGGCAAACTCACAAAATAGAGTTTCTAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp TGGGAAGGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACGGGCTTCCAGCGCTCTaGAGAGCAATGAGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: WEGLAALCGKQPWFQKHYGLPAL*RAMSPA
Trigger: TGCAGGGCTCATTGCTCTGCAGAGCGCTGGAAGCCC...GTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCCTTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp AACAAAGGAGGTTGCTTAACACCAAGTCTGGCGAAGCCACGGCGCTCAGCTGACTTGCCCGACCTCAGGTaGTGGGTTGGAGTGGTATTT +
Preference number: 4 (lower is better)
Translates to: NKGGCLTPSLAKPRRSADLPDLR*WVGVVF
Trigger: AAATACCACTCCAACCCAGCACCTGAGGTCGGGCAA...GTCAGCTGAGCGCCGTGGCTTCGCCAGACTTGGTGTTAAGCAACCTCCTTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp GCCACAGGAAAGCTCCAATATACTCTATTCATTGCTCAAGTGGACCTTAAAGAAAGGCGGCAACGAGGCTaGGGGAGGGGCGCCCGCCAT +
Preference number: 4 (lower is better)
Translates to: ATGKLQYTLFIAQVDLKERRQRG*GRGARH
Trigger: ATGGCGGGCGCCCCTCCCCCAGCCTCGTTGCCGCCT...TTCTTTAAGGTCCACTTGAGCAATGAATAGAGTATATTGGAGCTTTCCTGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255380.8
CDS-3UTR CCA 90 bp CTGATCCCTGGAATCCTTCTCTGTGCCACTCTGGTATTAGACTTCTCCGCTGTGCCAGAGGGTCATCGGTaGTACCGTCTGGAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: LIPGILLCATLVLDFSAVPEGHR*YRLERR
Trigger: TCTCCTCTCCAGACGGTACCACCGATGACCCTCTGG...CACAGCGGAGAAGTCTAATACCAGAGTGGCACAGAGAAGGATTCCAGGGATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp CACAACACGAATGCCCTGTACAAAGGGAAGATATCTCCGCGGCCCTCCCACCTCGAACTGCCCGTGGGGTaGACAAAGTTTTCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: HNTNALYKGKISPRPSHLELPVG*TKFSVS
Trigger: AGAGACAGAAAACTTTGTCCACCCCACGGGCAGTTC...GAGGTGGGAGGGCCGCGGAGATATCTTCCCTTTGTACAGGGCATTCGTGTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp CTGATCCCTGGAATCCTTCTCTGTGCCACTCTGGTATTAGACTTCTCCGCTGTGCTGCTGCTGTGGTCTTaGTCCATCTGCTCGGAGCTG +
Preference number: 4 (lower is better)
Translates to: LIPGILLCATLVLDFSAVLLLWS*SICSEL
Trigger: CAGCTCCGAGCAGATGGACCAAGACCACAGCAGCAG...CACAGCGGAGAAGTCTAATACCAGAGTGGCACAGAGAAGGATTCCAGGGATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp CACAACACGAATGCCCTGTACAAAGGGAAGATATCTCCGCGGCCCTCCCACCTCGTTCCACTTGGGGTCTaGATTCCCACTTTTGGGATC +
Preference number: 4 (lower is better)
Translates to: HNTNALYKGKISPRPSHLVPLGV*IPTFGI
Trigger: GATCCCAAAAGTGGGAATCCAGACCCCAAGTGGAAC...GAGGTGGGAGGGCCGCGGAGATATCTTCCCTTTGTACAGGGCATTCGTGTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp GTCTGTAAACACCACCTCACACTGAATACAAAAGCAGCTTCTACCCAGCTCTGGTCCTCTGCCTGGTGGTaGCGGTCGTGGCTACTGCTG +
Preference number: 4 (lower is better)
Translates to: VCKHHLTLNTKAASTQLWSSAWW*RSWLLL
Trigger: CAGCAGTAGCCACGACCGCCACCACCAGGCAGAGGA...CCAGAGCTGGGTAGAAGCTGCTTTTGTATTCAGTGTGAGGTGGTGTTTACAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676153.1
3UTR CAA 72 bp CCTGCAGTGTTCCACTTGGGGTCTGGATTCCCACTTTaGGGATCCTTGGGAAGAATGTGGGAACTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: PAVFHLGSGFPL*GSLGRMWELGQ
Trigger: CTGACCCAGTTCCCACATTCTTCCCAAGGATCCCAAAAGTGGGAATCCAGACCCCAAGTGGAACACTGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp TGCAGTGTTCCACTTGGGGTCTGGATTCCCACTTTTGGGATCCTTGGGAAGAATCCAGGATGTTGCCGATaGTGGTCACCAAGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: CSVPLGVWIPTFGILGKNPGCCR*WSPRPG
Trigger: TCCTGGCCTTGGTGACCATCATCGGCAACATCCTGG...ATTCTTCCCAAGGATCCCAAAAGTGGGAATCCAGACCCCAAGTGGAACACTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp TGGGAAGGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACTTGAGGATGGTGCTGTaGCCCGGAAGCTTGAGCACG +
Preference number: 4 (lower is better)
Translates to: WEGLAALCGKQPWFQKHYLRMVL*PGSLST
Trigger: CGTGCTCAAGCTTCCGGGTCACAGCACCATCCTCAA...GTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCCTTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp CACAACACGAATGCCCTGTACAAAGGGAAGATATCTCCGCGGCCCTCCCACCTCTGTTCACCAGAACCATaGTGTTGTATGGGGTCCAAG +
Preference number: 4 (lower is better)
Translates to: HNTNALYKGKISPRPSHLCSPEP*CCMGSK
Trigger: CTTGGACCCCATACAACATCATGGTTCTGGTGAACA...GAGGTGGGAGGGCCGCGGAGATATCTTCCCTTTGTACAGGGCATTCGTGTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp CACAACACGAATGCCCTGTACAAAGGGAAGATATCTCCGCGGCCCTCCCACCTCGGTTGGAGTGGTATTTaGAACCATACTACTCCGGGT +
Preference number: 4 (lower is better)
Translates to: HNTNALYKGKISPRPSHLGWSGI*NHTTPG
Trigger: ACCCGGAGTAGTATGGTTTCAAATACCACTCCAACC...GAGGTGGGAGGGCCGCGGAGATATCTTCCCTTTGTACAGGGCATTCGTGTTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp GGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACACTGGGTGCAGCTTCGAGAACTaGCCGTGGGGTGGACAAAGT +
Preference number: 4 (lower is better)
Translates to: GLAALCGKQPWFQKHYTGCSFEN*PWGGQS
Trigger: ACTTTGTCCACCCCACGGGCAGTTCTCGAAGCTGCA...CCCAGTGTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp TGCAGTGTTCCACTTGGGGTCTGGATTCCCACTTTTGGGATCCTTGGGAAGAATACGCTCTTCTGGGCCTaGAGCTTGTCGGCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: CSVPLGVWIPTFGILGKNTLFWA*SLSAFL
Trigger: GAGGAAAGCCGACAAGCTGCAGGCCCAGAAGAGCGT...ATTCTTCCCAAGGATCCCAAAAGTGGGAATCCAGACCCCAAGTGGAACACTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp CACAACACGAATGCCCTGTACAAAGGGAAGATATCTCCGCGGCCCTCCCACCTCAGCTTTTTGGAAAACTaGCTCCATCGTCCACGCTCT +
Preference number: 4 (lower is better)
Translates to: HNTNALYKGKISPRPSHLSFLEN*LHRPRS
Trigger: AGAGCGTGGACGATGGAGGCAGTTTTCCAAAAAGCT...GAGGTGGGAGGGCCGCGGAGATATCTTCCCTTTGTACAGGGCATTCGTGTTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp CTGATCCCTGGAATCCTTCTCTGTGCCACTCTGGTATTAGACTTCTCCGCTGTGCAAGGCCTGCTCGGGTaGGCGCTTGTGAAAAATGAC +
Preference number: 4 (lower is better)
Translates to: LIPGILLCATLVLDFSAVQGLLG*ALVKND
Trigger: GTCATTTTTCACAAGCGCGCACCCGAGCAGGCCTTG...CACAGCGGAGAAGTCTAATACCAGAGTGGCACAGAGAAGGATTCCAGGGATCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp AACAAAGGAGGTTGCTTAACACCAAGTCTGGCGAAGCCACGGCGCTCAGCTGACGTGACACACCTGAAATaGCTACTGAGGAAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: NKGGCLTPSLAKPRRSADVTHLK*LLRKCW
Trigger: CCAGCACTTCCTCAGTAGGCATTTCAGGTGTGTCAC...GTCAGCTGAGCGCCGTGGCTTCGCCAGACTTGGTGTTAAGCAACCTCCTTTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp TGGGAAGGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACCTGCTGCTGTGGTCTTaGTCCATCTGCTCGGAGCTG +
Preference number: 4 (lower is better)
Translates to: WEGLAALCGKQPWFQKHYLLLWS*SICSEL
Trigger: CAGCTCCGAGCAGATGGACCAAGACCACAGCAGCAG...GTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCCTTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp GTCTGTAAACACCACCTCACACTGAATACAAAAGCAGCTTCTACCCAGCTCTGGTCGTCCACGCTCTTCTaGGCCTGCAGCTTGTCGGCT +
Preference number: 4 (lower is better)
Translates to: VCKHHLTLNTKAASTQLWSSTLF*ACSLSA
Trigger: AGCCGACAAGCTGCAGGCCCAGAAGAGCGTGGACGA...CCAGAGCTGGGTAGAAGCTGCTTTTGTATTCAGTGTGAGGTGGTGTTTACAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp TGCAGTGTTCCACTTGGGGTCTGGATTCCCACTTTTGGGATCCTTGGGAAGAATACCGACTGTCTCTGCTaGTACTGCTGCTTGCGCCTC +
Preference number: 4 (lower is better)
Translates to: CSVPLGVWIPTFGILGKNTDCLC*YCCLRL
Trigger: GAGGCGCAAGCAGCAGTACCAGCAGAGACAGTCGGT...ATTCTTCCCAAGGATCCCAAAAGTGGGAATCCAGACCCCAAGTGGAACACTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp CACAACACGAATGCCCTGTACAAAGGGAAGATATCTCCGCGGCCCTCCCACCTCAAGAAACAGCCCTTTTaGGAGGGAGGCAAGATAGGA +
Preference number: 4 (lower is better)
Translates to: HNTNALYKGKISPRPSHLKKQPF*EGGKIG
Trigger: TCCTATCTTGCCTCCCTCCCAAAAGGGCTGTTTCTT...GAGGTGGGAGGGCCGCGGAGATATCTTCCCTTTGTACAGGGCATTCGTGTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTCCGCGATGGCACCGATaGCCCCGCGGTGTGCGCTCC +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSPRWHR*PRGVRS
Trigger: GGAGCGCACACCGCGGGGCCATCGGTGCCATCGCGG...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000675184.1
ENST00000676153.1
CDS-3UTR CCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGATGCCCGGTGCGCGGGTaGCGTCCGCTCCACCTTCCC +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRCPVRG*RPLHLP
Trigger: GGGAAGGTGGAGCGGACGCCACCCGCGCACCGGGCA...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675184.1
ENST00000676153.1
3UTR CAA 72 bp CCCGATTTAGCTCTGTTGAGACATCAACAAAGGAGGTaGCTTAACACCAAGTCTGGCGAAGCCACGGCGCTC +
Preference number: 4 (lower is better)
Translates to: PDLALLRHQQRR*LNTKSGEATAL
Trigger: GAGCGCCGTGGCTTCGCCAGACTTGGTGTTAAGCAACCTCCTTTGTTGATGTCTCAACAGAGCTAAATCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp TACCTAGAAACTCTATTTTGTGAGTTTGCCCGACCTCAGGTGCTGGGTTGGAGTCCAGGATGTTGCCGATaGTGGTCACCAAGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: YLETLFCEFARPQVLGWSPGCCR*WSPRPG
Trigger: TCCTGGCCTTGGTGACCATCATCGGCAACATCCTGG...ACTCCAACCCAGCACCTGAGGTCGGGCAAACTCACAAAATAGAGTTTCTAGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp TGCAGTGTTCCACTTGGGGTCTGGATTCCCACTTTTGGGATCCTTGGGAAGAATGGCTCACTGAGGAACTaGATGAAGCACTCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: CSVPLGVWIPTFGILGKNGSLRN*MKHSPG
Trigger: TCCGGGAGAGTGCTTCATTCAGTTCCTCAGTGAGCC...ATTCTTCCCAAGGATCCCAAAAGTGGGAATCCAGACCCCAAGTGGAACACTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp GGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACACTGGGCGTGCTCTTACCCACTaGGGAGTTGACGTCAGAAGT +
Preference number: 4 (lower is better)
Translates to: GLAALCGKQPWFQKHYTGRALTH*GVDVRS
Trigger: ACTTCTGACGTCAACTCCTCAGTGGGTAAGAGCACG...CCCAGTGTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp CTGATCCCTGGAATCCTTCTCTGTGCCACTCTGGTATTAGACTTCTCCGCTGTGCGTGCTCTTACCCACTaGGGAGTTGACGTCAGAAGT +
Preference number: 4 (lower is better)
Translates to: LIPGILLCATLVLDFSAVRALTH*GVDVRS
Trigger: ACTTCTGACGTCAACTCCTCAGTGGGTAAGAGCACG...CACAGCGGAGAAGTCTAATACCAGAGTGGCACAGAGAAGGATTCCAGGGATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp CTGATCCCTGGAATCCTTCTCTGTGCCACTCTGGTATTAGACTTCTCCGCTGTGCCGCTTTCTTCTCCTTaGCCAGGGACATCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: LIPGILLCATLVLDFSAVPLSSP*PGTSFS
Trigger: GGAAAAGGATGTCCCTGGTCAAGGAGAAGAAAGCGG...CACAGCGGAGAAGTCTAATACCAGAGTGGCACAGAGAAGGATTCCAGGGATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp GGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACACTGGGATGTGGTTCATTCTTTaGGCTCAGAGGGGCCCCGAT +
Preference number: 4 (lower is better)
Translates to: GLAALCGKQPWFQKHYTGMWFIL*AQRGPD
Trigger: ATCGGGGCCCCTCTGAGCTCAAAGAATGAACCACAT...CCCAGTGTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp AACAAAGGAGGTTGCTTAACACCAAGTCTGGCGAAGCCACGGCGCTCAGCTGACGTGAAGGTTACACAATaGACACCAGAAAGCACTGGC +
Preference number: 4 (lower is better)
Translates to: NKGGCLTPSLAKPRRSADVKVTQ*TPESTG
Trigger: GCCAGTGCTTTCTGGTGTTCATTGTGTAACCTTCAC...GTCAGCTGAGCGCCGTGGCTTCGCCAGACTTGGTGTTAAGCAACCTCCTTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp CACAACACGAATGCCCTGTACAAAGGGAAGATATCTCCGCGGCCCTCCCACCTCAGCAGCATGGGACATTaGTGTGCACAGAATGTTGAT +
Preference number: 4 (lower is better)
Translates to: HNTNALYKGKISPRPSHLSSMGH*CAQNVD
Trigger: ATCAACATTCTGTGCACATCAATGTCCCATGCTGCT...GAGGTGGGAGGGCCGCGGAGATATCTTCCCTTTGTACAGGGCATTCGTGTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp TACCTAGAAACTCTATTTTGTGAGTTTGCCCGACCTCAGGTGCTGGGTTGGAGTGACCAGATGTCAGGCTaGCCAAGAGACCAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: YLETLFCEFARPQVLGWSDQMSG*PRDQLH
Trigger: GTGGAGCTGGTCTCTTGGGCAGCCTGACATCTGGTC...ACTCCAACCCAGCACCTGAGGTCGGGCAAACTCACAAAATAGAGTTTCTAGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp AACAAAGGAGGTTGCTTAACACCAAGTCTGGCGAAGCCACGGCGCTCAGCTGACCTGGAGAGGAGAAATTaGCAGCTGCTCGAGAAACAT +
Preference number: 4 (lower is better)
Translates to: NKGGCLTPSLAKPRRSADLERRN*QLLEKH
Trigger: ATGTTTCTCGAGCAGCTGGCAATTTCTCCTCTCCAG...GTCAGCTGAGCGCCGTGGCTTCGCCAGACTTGGTGTTAAGCAACCTCCTTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp TGGGAAGGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACTGCAGCTTCGAGAACTaGCCGTGGGGTGGACAAAGT +
Preference number: 4 (lower is better)
Translates to: WEGLAALCGKQPWFQKHYCSFEN*PWGGQS
Trigger: ACTTTGTCCACCCCACGGGCAGTTCTCGAAGCTGCA...GTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCCTTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAGATGGCCCCGCGGTGTaGGCTCCGGGGTCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRDGPAV*APGSES
Trigger: GCTCTCAGACCCCGGAGCGCACACCGCGGGGCCATC...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000675184.1
ENST00000676153.1
CDS-3UTR GCA 90 bp AAAACCAAAGCAAACACCTGCTACCTAGAAACTCTATTTTGTGAGTTTGCCCGATCCCAGAAGCGCTGCTaGGGCCCCGGCGGACTGATG +
Preference number: 4 (lower is better)
Translates to: KTKANTCYLETLFCEFARSQKRC*GPGGLM
Trigger: CATCAGTCCGCCGGGGCCGCAGCAGCGCTTCTGGGA...TCGGGCAAACTCACAAAATAGAGTTTCTAGGTAGCAGGTGTTTGCTTTGGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676153.1
CDS-3UTR CCA 90 bp TGCAGTGTTCCACTTGGGGTCTGGATTCCCACTTTTGGGATCCTTGGGAAGAATCATAGGACAGAGGAGTaGACCAGATGTCAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: CSVPLGVWIPTFGILGKNHRTEE*TRCQAA
Trigger: GGCAGCCTGACATCTGGTCCACTCCTCTGTCCTATG...ATTCTTCCCAAGGATCCCAAAAGTGGGAATCCAGACCCCAAGTGGAACACTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp TGCAGTGTTCCACTTGGGGTCTGGATTCCCACTTTTGGGATCCTTGGGAAGAATAGGACAGAGGTAGAGTaGCCGTGCTCTTACCCACTG +
Preference number: 4 (lower is better)
Translates to: CSVPLGVWIPTFGILGKNRTEVE*PCSYPL
Trigger: CAGTGGGTAAGAGCACGGCCACTCTACCTCTGTCCT...ATTCTTCCCAAGGATCCCAAAAGTGGGAATCCAGACCCCAAGTGGAACACTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp GTCTGTAAACACCACCTCACACTGAATACAAAAGCAGCTTCTACCCAGCTCTGGACCGACTGTCTCTGCTaGTACTGCTGCTTGCGCCTC +
Preference number: 4 (lower is better)
Translates to: VCKHHLTLNTKAASTQLWTDCLC*YCCLRL
Trigger: GAGGCGCAAGCAGCAGTACCAGCAGAGACAGTCGGT...CCAGAGCTGGGTAGAAGCTGCTTTTGTATTCAGTGTGAGGTGGTGTTTACAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp CTGATCCCTGGAATCCTTCTCTGTGCCACTCTGGTATTAGACTTCTCCGCTGTGGCTGTGACAGAGCCTTaGCATCCTTCTTTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: LIPGILLCATLVLDFSAVAVTEP*HPSFLP
Trigger: AGGGAGGAAAGAAGGATGCCAAGGCTCTGTCACAGC...CACAGCGGAGAAGTCTAATACCAGAGTGGCACAGAGAAGGATTCCAGGGATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp CTGATCCCTGGAATCCTTCTCTGTGCCACTCTGGTATTAGACTTCTCCGCTGTGACCCTGACTGATCCCTaGAATCCTTCTCTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: LIPGILLCATLVLDFSAVTLTDP*NPSLCH
Trigger: GTGGCACAGAGAAGGATTCCAGGGATCAGTCAGGGT...CACAGCGGAGAAGTCTAATACCAGAGTGGCACAGAGAAGGATTCCAGGGATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp CACAACACGAATGCCCTGTACAAAGGGAAGATATCTCCGCGGCCCTCCCACCTCGGTGCTGGGTTGGAGTaGTATTTGAAACCATACTAC +
Preference number: 4 (lower is better)
Translates to: HNTNALYKGKISPRPSHLGAGLE*YLKPYY
Trigger: GTAGTATGGTTTCAAATACCACTCCAACCCAGCACC...GAGGTGGGAGGGCCGCGGAGATATCTTCCCTTTGTACAGGGCATTCGTGTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp GTCATGGTAGCTGCTGACCTCAGTTTTGACCGATTTGGCATCAGAAGGCAAATTTCTTCCTCTGCCTGGTaGTGGCGGTCGTGGCTACTG +
Preference number: 4 (lower is better)
Translates to: VMVAADLSFDRFGIRRQISSSAW*WRSWLL
Trigger: CAGTAGCCACGACCGCCACCACCAGGCAGAGGAAGA...AATTTGCCTTCTGATGCCAAATCGGTCAAAACTGAGGTCAGCAGCTACCATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676153.1
CDS-3UTR CCA 90 bp GCCACAGGAAAGCTCCAATATACTCTATTCATTGCTCAAGTGGACCTTAAAGAACCTGGAGATCCGCGATaGCACCGATGGCCCCGCGGT +
Preference number: 4 (lower is better)
Translates to: ATGKLQYTLFIAQVDLKEPGDPR*HRWPRG
Trigger: ACCGCGGGGCCATCGGTGCCATCGCGGATCTCCAGG...TTCTTTAAGGTCCACTTGAGCAATGAATAGAGTATATTGGAGCTTTCCTGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676153.1
CDS-3UTR TCA 90 bp GTCATGGTAGCTGCTGACCTCAGTTTTGACCGATTTGGCATCAGAAGGCAAATTACTTGCCAGACGGTATaGCCTCCCAGAGGGTCATCG +
Preference number: 4 (lower is better)
Translates to: VMVAADLSFDRFGIRRQITCQTV*PPRGSS
Trigger: CGATGACCCTCTGGGAGGTCATACCGTCTGGCAAGT...AATTTGCCTTCTGATGCCAAATCGGTCAAAACTGAGGTCAGCAGCTACCATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp TGCAGTGTTCCACTTGGGGTCTGGATTCCCACTTTTGGGATCCTTGGGAAGAATCCGTTAAGAAAGCGATaGAGACCACTTGCCAGACGG +
Preference number: 4 (lower is better)
Translates to: CSVPLGVWIPTFGILGKNPLRKR*RPLARR
Trigger: CCGTCTGGCAAGTGGTCTTCATCGCTTTCTTAACGG...ATTCTTCCCAAGGATCCCAAAAGTGGGAATCCAGACCCCAAGTGGAACACTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp GGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACACTGGGAAAGGACAAAGGAGATaGCCCAAGCCAGACCGATCA +
Preference number: 4 (lower is better)
Translates to: GLAALCGKQPWFQKHYTGKGQRR*PKPDRS
Trigger: TGATCGGTCTGGCTTGGGTCATCTCCTTTGTCCTTT...CCCAGTGTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp CTGATCCCTGGAATCCTTCTCTGTGCCACTCTGGTATTAGACTTCTCCGCTGTGAAAGGACAAAGGAGATaGCCCAAGCCAGACCGATCA +
Preference number: 4 (lower is better)
Translates to: LIPGILLCATLVLDFSAVKGQRR*PKPDRS
Trigger: TGATCGGTCTGGCTTGGGTCATCTCCTTTGTCCTTT...CACAGCGGAGAAGTCTAATACCAGAGTGGCACAGAGAAGGATTCCAGGGATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp TACCTAGAAACTCTATTTTGTGAGTTTGCCCGACCTCAGGTGCTGGGTTGGAGTGTAACTTGGTGGAGTTaGGGATGGTGCTGTGACCCG +
Preference number: 4 (lower is better)
Translates to: YLETLFCEFARPQVLGWSVTWWS*GWCCDP
Trigger: CGGGTCACAGCACCATCCTCAACTCCACCAAGTTAC...ACTCCAACCCAGCACCTGAGGTCGGGCAAACTCACAAAATAGAGTTTCTAGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp TGCAGTGTTCCACTTGGGGTCTGGATTCCCACTTTTGGGATCCTTGGGAAGAATAGCACTGGCCACAGCTaGTTAACAAAGGTGCAAGCC +
Preference number: 4 (lower is better)
Translates to: CSVPLGVWIPTFGILGKNSTGHS*LTKVQA
Trigger: GGCTTGCACCTTTGTTAATCAGCTGTGGCCAGTGCT...ATTCTTCCCAAGGATCCCAAAAGTGGGAATCCAGACCCCAAGTGGAACACTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp TGGGAAGGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACAGCACTGGCCACAGCTaGTTAACAAAGGTGCAAGCC +
Preference number: 4 (lower is better)
Translates to: WEGLAALCGKQPWFQKHYSTGHS*LTKVQA
Trigger: GGCTTGCACCTTTGTTAATCAGCTGTGGCCAGTGCT...GTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCCTTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp TGGGAAGGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACGAAGTTCGTAACTGCTaGAGCTTCGAGAACTGCCCG +
Preference number: 4 (lower is better)
Translates to: WEGLAALCGKQPWFQKHYEVRNC*SFENCP
Trigger: CGGGCAGTTCTCGAAGCTGCAGCAGTTACGAACTTC...GTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCCTTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp TACCTAGAAACTCTATTTTGTGAGTTTGCCCGACCTCAGGTGCTGGGTTGGAGTTGGTCTTGGTCCATCTaGTCGGAGCTGGGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: YLETLFCEFARPQVLGWSWSWSI*SELGFQ
Trigger: CTGGAAACCCAGCTCCGAGCAGATGGACCAAGACCA...ACTCCAACCCAGCACCTGAGGTCGGGCAAACTCACAAAATAGAGTTTCTAGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp AACAAAGGAGGTTGCTTAACACCAAGTCTGGCGAAGCCACGGCGCTCAGCTGACGAACTGGGTCAGCTATaGTCATCTGAGATTCCAAAG +
Preference number: 4 (lower is better)
Translates to: NKGGCLTPSLAKPRRSADELGQL*SSEIPK
Trigger: CTTTGGAATCTCAGATGAGCATAGCTGACCCAGTTC...GTCAGCTGAGCGCCGTGGCTTCGCCAGACTTGGTGTTAAGCAACCTCCTTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp AACAAAGGAGGTTGCTTAACACCAAGTCTGGCGAAGCCACGGCGCTCAGCTGACATCAACAAAGGAGGTTaGTTAACACCAAGTCTGGCG +
Preference number: 4 (lower is better)
Translates to: NKGGCLTPSLAKPRRSADINKGG*LTPSLA
Trigger: CGCCAGACTTGGTGTTAAGCAACCTCCTTTGTTGAT...GTCAGCTGAGCGCCGTGGCTTCGCCAGACTTGGTGTTAAGCAACCTCCTTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp GAGTGGTATTTGAAACCATACTACTCCGGGTTTGCCAACAAATTTCAAAGCTTCTCCTCGCGTTCCTCCTaGTCCTCCTCCTCCCCGGAC +
Preference number: 4 (lower is better)
Translates to: EWYLKPYYSGFANKFQSFSSRSS*SSSSPD
Trigger: GTCCGGGGAGGAGGAGGAGCAGGAGGAACGCGAGGA...GAAGCTTTGAAATTTGTTGGCAAACCCGGAGTAGTATGGTTTCAAATACCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676153.1
CDS-3UTR GCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAGGCGGTCGTGGCTACTaGTGGCCGCTCCTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRGGRGY*WPLLLS
Trigger: GGAGAGGAGGAGCGGCCAGCAGTAGCCACGACCGCC...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676153.1
CDS-3UTR GCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGATCCCAGAAGCGCTGCTaGGGCCCCGGCGGACTGATG +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRSQKRC*GPGGLM
Trigger: CATCAGTCCGCCGGGGCCGCAGCAGCGCTTCTGGGA...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000675184.1
ENST00000676153.1
CDS-3UTR GCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTTCTTCCCAGAAGCGCTaGTGCGGCCCCGGCGGACTG +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSSSQKR*CGPGGL
Trigger: CAGTCCGCCGGGGCCGCAGCAGCGCTTCTGGGAAGA...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000675184.1
ENST00000676153.1
CDS-3UTR CCA 90 bp TGCAGTGTTCCACTTGGGGTCTGGATTCCCACTTTTGGGATCCTTGGGAAGAATATCGGTGGTACCGTCTaGAGAGGAGAAATTGCCAGC +
Preference number: 4 (lower is better)
Translates to: CSVPLGVWIPTFGILGKNIGGTV*RGEIAS
Trigger: GCTGGCAATTTCTCCTCTCCAGACGGTACCACCGAT...ATTCTTCCCAAGGATCCCAAAAGTGGGAATCCAGACCCCAAGTGGAACACTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp GTCTGTAAACACCACCTCACACTGAATACAAAAGCAGCTTCTACCCAGCTCTGGCTGTCACTGCTGCTGTaGTCTTGGTCCATCTGCTCG +
Preference number: 4 (lower is better)
Translates to: VCKHHLTLNTKAASTQLWLSLLL*SWSICS
Trigger: CGAGCAGATGGACCAAGACCACAGCAGCAGTGACAG...CCAGAGCTGGGTAGAAGCTGCTTTTGTATTCAGTGTGAGGTGGTGTTTACAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp GTCTGTAAACACCACCTCACACTGAATACAAAAGCAGCTTCTACCCAGCTCTGGGCACGATGGAGTAGATaGCTCTCGTCTCGGAGCCAA +
Preference number: 4 (lower is better)
Translates to: VCKHHLTLNTKAASTQLWARWSR*LSSRSQ
Trigger: TTGGCTCCGAGACGAGAGCCATCTACTCCATCGTGC...CCAGAGCTGGGTAGAAGCTGCTTTTGTATTCAGTGTGAGGTGGTGTTTACAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp TGGGAAGGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACACGGCTGACTCTAGCTaGATGGGAAGCTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: WEGLAALCGKQPWFQKHYTADSS*MGSLEK
Trigger: CTTCTCCAAGCTTCCCATCCAGCTAGAGTCAGCCGT...GTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCCTTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp AACAAAGGAGGTTGCTTAACACCAAGTCTGGCGAAGCCACGGCGCTCAGCTGACCTGGATTCCCACTTTTaGGATCCTTGGGAAGAATGT +
Preference number: 4 (lower is better)
Translates to: NKGGCLTPSLAKPRRSADLDSHF*DPWEEC
Trigger: ACATTCTTCCCAAGGATCCCAAAAGTGGGAATCCAG...GTCAGCTGAGCGCCGTGGCTTCGCCAGACTTGGTGTTAAGCAACCTCCTTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp AACAAAGGAGGTTGCTTAACACCAAGTCTGGCGAAGCCACGGCGCTCAGCTGACTTTGAAAGGACACCATaGCTGACGACTGAAGAGTCA +
Preference number: 4 (lower is better)
Translates to: NKGGCLTPSLAKPRRSADFERTP*LTTEES
Trigger: TGACTCTTCAGTCGTCAGCCATGGTGTCCTTTCAAA...GTCAGCTGAGCGCCGTGGCTTCGCCAGACTTGGTGTTAAGCAACCTCCTTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp CACAACACGAATGCCCTGTACAAAGGGAAGATATCTCCGCGGCCCTCCCACCTCAATGCTTCTTTGCAGTaGAGAGTATGGCCCCTTTAT +
Preference number: 4 (lower is better)
Translates to: HNTNALYKGKISPRPSHLNASLQ*RVWPLY
Trigger: ATAAAGGGGCCATACTCTCCACTGCAAAGAAGCATT...GAGGTGGGAGGGCCGCGGAGATATCTTCCCTTTGTACAGGGCATTCGTGTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp GTCATGGTAGCTGCTGACCTCAGTTTTGACCGATTTGGCATCAGAAGGCAAATTAACTCTTCCTCTGCCTaGTGGTGGCGGTCGTGGCTA +
Preference number: 4 (lower is better)
Translates to: VMVAADLSFDRFGIRRQINSSSA*WWRSWL
Trigger: TAGCCACGACCGCCACCACCAGGCAGAGGAAGAGTT...AATTTGCCTTCTGATGCCAAATCGGTCAAAACTGAGGTCAGCAGCTACCATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676153.1
CDS-3UTR CCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTCCTGGAGATCCGCGATaGCACCGATGGCCCCGCGGT +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSPGDPR*HRWPRG
Trigger: ACCGCGGGGCCATCGGTGCCATCGCGGATCTCCAGG...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000675184.1
ENST00000676153.1
CDS-3UTR CCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGACAGCTGCGCTCCAGGTaGCTGTCCCACGCCGGTCTC +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRQLRSR*LSHAGL
Trigger: GAGACCGGCGTGGGACAGCCACCTGGAGCGCAGCTG...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675184.1
ENST00000676153.1
3UTR CAA 72 bp TTGGAACCACAGATTCGTAAGCCTGCAGTGTTCCACTaGGGGTCTGGATTCCCACTTTTGGGATCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: LEPQIRKPAVFH*GSGFPLLGSLG
Trigger: TCCCAAGGATCCCAAAAGTGGGAATCCAGACCCCAAGTGGAACACTGCAGGCTTACGAATCTGTGGTTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp AACAAAGGAGGTTGCTTAACACCAAGTCTGGCGAAGCCACGGCGCTCAGCTGACGTCATTGTGACTCTCTaGCATAGTAATCTACCAGGA +
Preference number: 4 (lower is better)
Translates to: NKGGCLTPSLAKPRRSADVIVTL*HSNLPG
Trigger: TCCTGGTAGATTACTATGTCAGAGAGTCACAATGAC...GTCAGCTGAGCGCCGTGGCTTCGCCAGACTTGGTGTTAAGCAACCTCCTTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGCTGCCGAAATGAGTaGCGGTTCCCGGGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRSCRNE*RFPGAA
Trigger: GGCTGCCCCCGGGAACCGTCACTCATTTCGGCAGCT...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR TCA 90 bp GTCATGGTAGCTGCTGACCTCAGTTTTGACCGATTTGGCATCAGAAGGCAAATTTGTGACCCGGAAGCTTaGGCACGATGGAGTAGATGG +
Preference number: 4 (lower is better)
Translates to: VMVAADLSFDRFGIRRQICDPEA*ARWSRW
Trigger: CCATCTACTCCATCGTGCTCAAGCTTCCGGGTCACA...AATTTGCCTTCTGATGCCAAATCGGTCAAAACTGAGGTCAGCAGCTACCATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp GTCATGGTAGCTGCTGACCTCAGTTTTGACCGATTTGGCATCAGAAGGCAAATTTCGGGTGCGCGCTTGTaGAAAATGACCGACTGTCTC +
Preference number: 4 (lower is better)
Translates to: VMVAADLSFDRFGIRRQISGARL*KMTDCL
Trigger: GAGACAGTCGGTCATTTTTCACAAGCGCGCACCCGA...AATTTGCCTTCTGATGCCAAATCGGTCAAAACTGAGGTCAGCAGCTACCATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCGCCACGGCGCTCAGCTaGCTCACGAGCCTGTCCGCT +
Preference number: 4 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFATALS*LTSLSA
Trigger: AGCGGACAGGCTCGTGAGTCAGCTGAGCGCCGTGGC...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp TGCAGTGTTCCACTTGGGGTCTGGATTCCCACTTTTGGGATCCTTGGGAAGAATGAGTTAGGTGCTTGGTaGTGCCAACAGGATGACATG +
Preference number: 4 (lower is better)
Translates to: CSVPLGVWIPTFGILGKNELGAW*CQQDDM
Trigger: CATGTCATCCTGTTGGCATCACCAAGCACCTAACTC...ATTCTTCCCAAGGATCCCAAAAGTGGGAATCCAGACCCCAAGTGGAACACTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp GGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACACTGGGCTGGAGAATGGAGATTaGGTGTGTGTGTGTGTGCTT +
Preference number: 4 (lower is better)
Translates to: GLAALCGKQPWFQKHYTGLENGD*VCVCVL
Trigger: AAGCACACACACACACACTCAATCTCCATTCTCCAG...CCCAGTGTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp CTGATCCCTGGAATCCTTCTCTGTGCCACTCTGGTATTAGACTTCTCCGCTGTGCTCCCACCCGAATATTaGGCTTTTCAGACCAGCTTA +
Preference number: 4 (lower is better)
Translates to: LIPGILLCATLVLDFSAVLPPEY*AFQTSL
Trigger: TAAGCTGGTCTGAAAAGCGCAATATTCGGGTGGGAG...CACAGCGGAGAAGTCTAATACCAGAGTGGCACAGAGAAGGATTCCAGGGATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255380.8
CDS-3UTR GCA 90 bp TGCAGTGTTCCACTTGGGGTCTGGATTCCCACTTTTGGGATCCTTGGGAAGAATTCCAACTGTCACTGCTaGTGTGGTCTTGGTCCATCT +
Preference number: 4 (lower is better)
Translates to: CSVPLGVWIPTFGILGKNSNCHC*CGLGPS
Trigger: AGATGGACCAAGACCACAGCAGCAGTGACAGTTGGA...ATTCTTCCCAAGGATCCCAAAAGTGGGAATCCAGACCCCAAGTGGAACACTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp TGCAGTGTTCCACTTGGGGTCTGGATTCCCACTTTTGGGATCCTTGGGAAGAATTGTTCCAACTGTCACTaGTGCTGTGGTCTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: CSVPLGVWIPTFGILGKNCSNCH*CCGLGP
Trigger: TGGACCAAGACCACAGCAGCAGTGACAGTTGGAACA...ATTCTTCCCAAGGATCCCAAAAGTGGGAATCCAGACCCCAAGTGGAACACTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp GGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACACTGGGAGCTTTTTGGAAAACTaGCTCCATCGTCCACGCTCT +
Preference number: 4 (lower is better)
Translates to: GLAALCGKQPWFQKHYTGSFLEN*LHRPRS
Trigger: AGAGCGTGGACGATGGAGGCAGTTTTCCAAAAAGCT...CCCAGTGTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp GTCATGGTAGCTGCTGACCTCAGTTTTGACCGATTTGGCATCAGAAGGCAAATTATGACCGACTGTCTCTaGTGGTACTGCTGCTTGCGC +
Preference number: 4 (lower is better)
Translates to: VMVAADLSFDRFGIRRQIMTDCL*WYCCLR
Trigger: GCGCAAGCAGCAGTACCAGCAGAGACAGTCGGTCAT...AATTTGCCTTCTGATGCCAAATCGGTCAAAACTGAGGTCAGCAGCTACCATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp TACCTAGAAACTCTATTTTGTGAGTTTGCCCGACCTCAGGTGCTGGGTTGGAGTTTGCCCGACCTCAGGTaGTGGGTTGGAGTGGTATTT +
Preference number: 4 (lower is better)
Translates to: YLETLFCEFARPQVLGWSLPDLR*WVGVVF
Trigger: AAATACCACTCCAACCCAGCACCTGAGGTCGGGCAA...ACTCCAACCCAGCACCTGAGGTCGGGCAAACTCACAAAATAGAGTTTCTAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp GGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACACTGGGTGCCTACTGAGGAAGTaGTGGCCACGAGGTAATAAA +
Preference number: 4 (lower is better)
Translates to: GLAALCGKQPWFQKHYTGCLLRK*WPRGNK
Trigger: TTTATTACCTCGTGGCCAGCACTTCCTCAGTAGGCA...CCCAGTGTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTCTGTCCTTAAGATCGTaGCCCCCTGCCCGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSLSLRS*PPARSR
Trigger: GCGGCTCCGGGCAGGGGGGCACGATCTTAAGGACAG...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000675184.1
ENST00000676153.1
CDS-3UTR CCA 90 bp CACAACACGAATGCCCTGTACAAAGGGAAGATATCTCCGCGGCCCTCCCACCTCCCAGGCAAATCACTTTaGGTATATAATTGCCGTCAA +
Preference number: 4 (lower is better)
Translates to: HNTNALYKGKISPRPSHLPGKSL*VYNCRQ
Trigger: TTGACGGCAATTATATACCCAAAGTGATTTGCCTGG...GAGGTGGGAGGGCCGCGGAGATATCTTCCCTTTGTACAGGGCATTCGTGTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp CTGATCCCTGGAATCCTTCTCTGTGCCACTCTGGTATTAGACTTCTCCGCTGTGGAAGAATGTGGGAACTaGGTCAGCTATGCTCATCTG +
Preference number: 4 (lower is better)
Translates to: LIPGILLCATLVLDFSAVEECGN*VSYAHL
Trigger: CAGATGAGCATAGCTGACCCAGTTCCCACATTCTTC...CACAGCGGAGAAGTCTAATACCAGAGTGGCACAGAGAAGGATTCCAGGGATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp TGGGAAGGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACTCCTTGGGAAGAATGTaGGAACTGGGTCAGCTATGC +
Preference number: 4 (lower is better)
Translates to: WEGLAALCGKQPWFQKHYSLGRM*ELGQLC
Trigger: GCATAGCTGACCCAGTTCCCACATTCTTCCCAAGGA...GTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCCTTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp GGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACACTGGGCACTTTTGGGATCCTTaGGAAGAATGTGGGAACTGG +
Preference number: 4 (lower is better)
Translates to: GLAALCGKQPWFQKHYTGHFWDP*EECGNW
Trigger: CCAGTTCCCACATTCTTCCCAAGGATCCCAAAAGTG...CCCAGTGTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp TGGGAAGGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACCTGCAGTGTTCCACTTaGGGTCTGGATTCCCACTTT +
Preference number: 4 (lower is better)
Translates to: WEGLAALCGKQPWFQKHYLQCST*GLDSHF
Trigger: AAAGTGGGAATCCAGACCCCAAGTGGAACACTGCAG...GTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCCTTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp AACAAAGGAGGTTGCTTAACACCAAGTCTGGCGAAGCCACGGCGCTCAGCTGACGACAGGAAGCTCTATTaGGACAAGAAGATTCAGCTT +
Preference number: 4 (lower is better)
Translates to: NKGGCLTPSLAKPRRSADDRKLY*DKKIQL
Trigger: AAGCTGAATCTTCTTGTCCCAATAGAGCTTCCTGTC...GTCAGCTGAGCGCCGTGGCTTCGCCAGACTTGGTGTTAAGCAACCTCCTTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp GTCTGTAAACACCACCTCACACTGAATACAAAAGCAGCTTCTACCCAGCTCTGGCCCGACCTCAGGTGCTaGGTTGGAGTGGTATTTGAA +
Preference number: 4 (lower is better)
Translates to: VCKHHLTLNTKAASTQLWPDLRC*VGVVFE
Trigger: TTCAAATACCACTCCAACCCAGCACCTGAGGTCGGG...CCAGAGCTGGGTAGAAGCTGCTTTTGTATTCAGTGTGAGGTGGTGTTTACAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCAGCTGCCGAAATGAGTaGCGGTTCCCGGGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFSCRNE*RFPGAA
Trigger: GGCTGCCCCCGGGAACCGTCACTCATTTCGGCAGCT...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp TGGGAAGGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACTTCCGCTTAGTGATCTaGCTTCTGGTCTTCAGAGCA +
Preference number: 4 (lower is better)
Translates to: WEGLAALCGKQPWFQKHYFRLVI*LLVFRA
Trigger: TGCTCTGAAGACCAGAAGTCAGATCACTAAGCGGAA...GTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCCTTCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp GTCATGGTAGCTGCTGACCTCAGTTTTGACCGATTTGGCATCAGAAGGCAAATTCCGCTTTCTTCTCCTTaGCCAGGGACATCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: VMVAADLSFDRFGIRRQIPLSSP*PGTSFS
Trigger: GGAAAAGGATGTCCCTGGTCAAGGAGAAGAAAGCGG...AATTTGCCTTCTGATGCCAAATCGGTCAAAACTGAGGTCAGCAGCTACCATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp GTCATGGTAGCTGCTGACCTCAGTTTTGACCGATTTGGCATCAGAAGGCAAATTCGCGCTTGTGAAAAATaGCCGACTGTCTCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: VMVAADLSFDRFGIRRQIRACEK*PTVSAG
Trigger: ACCAGCAGAGACAGTCGGTCATTTTTCACAAGCGCG...AATTTGCCTTCTGATGCCAAATCGGTCAAAACTGAGGTCAGCAGCTACCATGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp CTGATCCCTGGAATCCTTCTCTGTGCCACTCTGGTATTAGACTTCTCCGCTGTGTCACCTATTCCTGGGTaGAGGTTACACAATGAACAC +
Preference number: 4 (lower is better)
Translates to: LIPGILLCATLVLDFSAVSPIPG*RLHNEH
Trigger: GTGTTCATTGTGTAACCTTCACCCAGGAATAGGTGA...CACAGCGGAGAAGTCTAATACCAGAGTGGCACAGAGAAGGATTCCAGGGATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp CTGATCCCTGGAATCCTTCTCTGTGCCACTCTGGTATTAGACTTCTCCGCTGTGAAAGGACACCATGGCTaGCGACTGAAGAGTCATATT +
Preference number: 4 (lower is better)
Translates to: LIPGILLCATLVLDFSAVKGHHG*RLKSHI
Trigger: AATATGACTCTTCAGTCGTCAGCCATGGTGTCCTTT...CACAGCGGAGAAGTCTAATACCAGAGTGGCACAGAGAAGGATTCCAGGGATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp GTCATGGTAGCTGCTGACCTCAGTTTTGACCGATTTGGCATCAGAAGGCAAATTTCCTTCTTTCCTCCCTaGGTCAGAGCTGAAACAGCC +
Preference number: 4 (lower is better)
Translates to: VMVAADLSFDRFGIRRQISFFPP*VRAETA
Trigger: GGCTGTTTCAGCTCTGACTCAGGGAGGAAAGAAGGA...AATTTGCCTTCTGATGCCAAATCGGTCAAAACTGAGGTCAGCAGCTACCATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp CACAACACGAATGCCCTGTACAAAGGGAAGATATCTCCGCGGCCCTCCCACCTCAGCAACGCATTTGGATaGCTTCCATATATCCAAATA +
Preference number: 4 (lower is better)
Translates to: HNTNALYKGKISPRPSHLSNAFG*LPYIQI
Trigger: TATTTGGATATATGGAAGTCATCCAAATGCGTTGCT...GAGGTGGGAGGGCCGCGGAGATATCTTCCCTTTGTACAGGGCATTCGTGTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp TACCTAGAAACTCTATTTTGTGAGTTTGCCCGACCTCAGGTGCTGGGTTGGAGTTCACAGACATTTCCCTaGGAGCTTCCTGCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: YLETLFCEFARPQVLGWSSQTFP*ELPAKR
Trigger: TCTCTTGGCAGGAAGCTCTCAGGGAAATGTCTGTGA...ACTCCAACCCAGCACCTGAGGTCGGGCAAACTCACAAAATAGAGTTTCTAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp CTGATCCCTGGAATCCTTCTCTGTGCCACTCTGGTATTAGACTTCTCCGCTGTGTGGTTCTGTACATCATaGTGGGGATGGATACAGTTC +
Preference number: 4 (lower is better)
Translates to: LIPGILLCATLVLDFSAVWFCTS*WGWIQF
Trigger: GAACTGTATCCATCCCCATCATGATGTACAGAACCA...CACAGCGGAGAAGTCTAATACCAGAGTGGCACAGAGAAGGATTCCAGGGATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676153.1
CDS-3UTR GCA 90 bp TACCTAGAAACTCTATTTTGTGAGTTTGCCCGACCTCAGGTGCTGGGTTGGAGTTGTTCCAACTGTCACTaGTGCTGTGGTCTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: YLETLFCEFARPQVLGWSCSNCH*CCGLGP
Trigger: TGGACCAAGACCACAGCAGCAGTGACAGTTGGAACA...ACTCCAACCCAGCACCTGAGGTCGGGCAAACTCACAAAATAGAGTTTCTAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp CACAACACGAATGCCCTGTACAAAGGGAAGATATCTCCGCGGCCCTCCCACCTCACTGAAAGCGTATGTTaGAGGAATAATTTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: HNTNALYKGKISPRPSHLTESVC*RNNLPV
Trigger: AACTGGCAAATTATTCCTGCAACATACGCTTTCAGT...GAGGTGGGAGGGCCGCGGAGATATCTTCCCTTTGTACAGGGCATTCGTGTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp AACAAAGGAGGTTGCTTAACACCAAGTCTGGCGAAGCCACGGCGCTCAGCTGACAACCTTTCTCAGGTCTaGAATGTTGACTCACACATT +
Preference number: 4 (lower is better)
Translates to: NKGGCLTPSLAKPRRSADNLSQV*NVDSHI
Trigger: AATGTGTGAGTCAACATTGCAGACCTGAGAAAGGTT...GTCAGCTGAGCGCCGTGGCTTCGCCAGACTTGGTGTTAAGCAACCTCCTTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCCTGTCCTTAAGATCGTaGCCCCCTGCCCGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFLSLRS*PPARSR
Trigger: GCGGCTCCGGGCAGGGGGGCACGATCTTAAGGACAG...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676153.1
CDS-3UTR CCA 90 bp TACCTAGAAACTCTATTTTGTGAGTTTGCCCGACCTCAGGTGCTGGGTTGGAGTTTCGAGAACTGCCCGTaGGGTGGACAAAGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: YLETLFCEFARPQVLGWSFENCP*GGQSFL
Trigger: CAGAAAACTTTGTCCACCCCACGGGCAGTTCTCGAA...ACTCCAACCCAGCACCTGAGGTCGGGCAAACTCACAAAATAGAGTTTCTAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp TGCAGTGTTCCACTTGGGGTCTGGATTCCCACTTTTGGGATCCTTGGGAAGAATCACTTTTGGGATCCTTaGGAAGAATGTGGGAACTGG +
Preference number: 4 (lower is better)
Translates to: CSVPLGVWIPTFGILGKNHFWDP*EECGNW
Trigger: CCAGTTCCCACATTCTTCCCAAGGATCCCAAAAGTG...ATTCTTCCCAAGGATCCCAAAAGTGGGAATCCAGACCCCAAGTGGAACACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp AACAAAGGAGGTTGCTTAACACCAAGTCTGGCGAAGCCACGGCGCTCAGCTGACTGCCGGATTATAATTTaGGTGCGGGAAGTTTTACTA +
Preference number: 4 (lower is better)
Translates to: NKGGCLTPSLAKPRRSADCRIII*VREVLL
Trigger: TAGTAAAACTTCCCGCACCCAAATTATAATCCGGCA...GTCAGCTGAGCGCCGTGGCTTCGCCAGACTTGGTGTTAAGCAACCTCCTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR CAA 72 bp TCTCCTAACCATCTGGCAATGCCTGGAGAATGGAGATaGAGTGTGTGTGTGTGTGCTTGTGAGAGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: SPNHLAMPGEWR*SVCVCACERER
Trigger: TCTCTCTCTCTCACAAGCACACACACACACACTCAATCTCCATTCTCCAGGCATTGCCAGATGGTTAGGAGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR CAA 72 bp GTTTGCCCGACCTCAGGTGCTGGGTTGGAGTGGTATTaGAAACCATACTACTCCGGGTTTGCCAACAAATTT +
Preference number: 4 (lower is better)
Translates to: VCPTSGAGLEWY*KPYYSGFANKF
Trigger: AAATTTGTTGGCAAACCCGGAGTAGTATGGTTTCAAATACCACTCCAACCCAGCACCTGAGGTCGGGCAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp GGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACACTGGGTGTGCAAGGTCATTGTaGCTCTCTGACATAGTAATC +
Preference number: 4 (lower is better)
Translates to: GLAALCGKQPWFQKHYTGCARSL*LSDIVI
Trigger: GATTACTATGTCAGAGAGTCACAATGACCTTGCACA...CCCAGTGTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp TACCTAGAAACTCTATTTTGTGAGTTTGCCCGACCTCAGGTGCTGGGTTGGAGTTTCCGCTTAGTGATCTaGCTTCTGGTCTTCAGAGCA +
Preference number: 4 (lower is better)
Translates to: YLETLFCEFARPQVLGWSFRLVI*LLVFRA
Trigger: TGCTCTGAAGACCAGAAGTCAGATCACTAAGCGGAA...ACTCCAACCCAGCACCTGAGGTCGGGCAAACTCACAAAATAGAGTTTCTAGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp GGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACACTGGGAACACCACCTCACACTaGATACAAAAGCAGCTTCTA +
Preference number: 4 (lower is better)
Translates to: GLAALCGKQPWFQKHYTGNTTSH*IQKQLL
Trigger: TAGAAGCTGCTTTTGTATTCAGTGTGAGGTGGTGTT...CCCAGTGTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp CTGATCCCTGGAATCCTTCTCTGTGCCACTCTGGTATTAGACTTCTCCGCTGTGCTTAAAGAATCACTTTaGAAGGACACCATGGCTGAC +
Preference number: 4 (lower is better)
Translates to: LIPGILLCATLVLDFSAVLKESL*KDTMAD
Trigger: GTCAGCCATGGTGTCCTTTCAAAGTGATTCTTTAAG...CACAGCGGAGAAGTCTAATACCAGAGTGGCACAGAGAAGGATTCCAGGGATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCCGCTCTGCAGAGCAATaGGCCCTGCACGAGGGCAAC +
Preference number: 4 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFRSAEQ*ALHEGN
Trigger: GTTGCCCTCGTGCAGGGCTCATTGCTCTGCAGAGCG...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp GTCATGGTAGCTGCTGACCTCAGTTTTGACCGATTTGGCATCAGAAGGCAAATTTTTTCACTCGTCCTCTaGAGCTGCCAGGGGAAGATT +
Preference number: 4 (lower is better)
Translates to: VMVAADLSFDRFGIRRQIFSLVL*SCQGKI
Trigger: AATCTTCCCCTGGCAGCTTCAGAGGACGAGTGAAAA...AATTTGCCTTCTGATGCCAAATCGGTCAAAACTGAGGTCAGCAGCTACCATGAC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp GTCTGTAAACACCACCTCACACTGAATACAAAAGCAGCTTCTACCCAGCTCTGGGGTTGGAGTGGTATTTaGAACCATACTACTCCGGGT +
Preference number: 4 (lower is better)
Translates to: VCKHHLTLNTKAASTQLWGWSGI*NHTTPG
Trigger: ACCCGGAGTAGTATGGTTTCAAATACCACTCCAACC...CCAGAGCTGGGTAGAAGCTGCTTTTGTATTCAGTGTGAGGTGGTGTTTACAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp TGCAGTGTTCCACTTGGGGTCTGGATTCCCACTTTTGGGATCCTTGGGAAGAATAGAAACTCTATTTTGTaGGTTTGCCCGACCTCAGGT +
Preference number: 4 (lower is better)
Translates to: CSVPLGVWIPTFGILGKNRNSIL*VCPTSG
Trigger: ACCTGAGGTCGGGCAAACTCACAAAATAGAGTTTCT...ATTCTTCCCAAGGATCCCAAAAGTGGGAATCCAGACCCCAAGTGGAACACTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp TGGGAAGGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACAATGCTGGGAGAGGCTaGAGATTTAGAGTCATCAGA +
Preference number: 4 (lower is better)
Translates to: WEGLAALCGKQPWFQKHYNAGRG*RFRVIR
Trigger: TCTGATGACTCTAAATCTTCAGCCTCTCCCAGCATT...GTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCCTTCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp TACCTAGAAACTCTATTTTGTGAGTTTGCCCGACCTCAGGTGCTGGGTTGGAGTGGTCAGAACTTTGTGTaGGTCTCTGTGGTTCTACCA +
Preference number: 4 (lower is better)
Translates to: YLETLFCEFARPQVLGWSGQNFV*VSVVLP
Trigger: TGGTAGAACCACAGAGACTCACACAAAGTTCTGACC...ACTCCAACCCAGCACCTGAGGTCGGGCAAACTCACAAAATAGAGTTTCTAGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp GTCATGGTAGCTGCTGACCTCAGTTTTGACCGATTTGGCATCAGAAGGCAAATTGAGAAATCAGCATGCTaGTTCACCATCGTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: VMVAADLSFDRFGIRRQIEKSAC*FTIVEA
Trigger: GGCTTCCACGATGGTGAATCAGCATGCTGATTTCTC...AATTTGCCTTCTGATGCCAAATCGGTCAAAACTGAGGTCAGCAGCTACCATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp TGCAGTGTTCCACTTGGGGTCTGGATTCCCACTTTTGGGATCCTTGGGAAGAATGGAGAAATTGCCAGCTaGTCGAGAAACATTGTAGCT +
Preference number: 4 (lower is better)
Translates to: CSVPLGVWIPTFGILGKNGEIAS*SRNIVA
Trigger: AGCTACAATGTTTCTCGAGCAGCTGGCAATTTCTCC...ATTCTTCCCAAGGATCCCAAAAGTGGGAATCCAGACCCCAAGTGGAACACTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp GGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACACTGGGTTGACCGTCTTCAGCTaGTTGTTGACCTTAAATGAC +
Preference number: 4 (lower is better)
Translates to: GLAALCGKQPWFQKHYTGLTVFS*LLTLND
Trigger: GTCATTTAAGGTCAACAAGCAGCTGAAGACGGTCAA...CCCAGTGTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp TGGGAAGGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACGGTTCACAACACGAATaGCCTGTACAAAGGGAAGAT +
Preference number: 4 (lower is better)
Translates to: WEGLAALCGKQPWFQKHYGSQHE*PVQRED
Trigger: ATCTTCCCTTTGTACAGGGCATTCGTGTTGTGAACC...GTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCCTTCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp TGCAGTGTTCCACTTGGGGTCTGGATTCCCACTTTTGGGATCCTTGGGAAGAATCTAGAAAGAGTTAGGTaGTTGGTGATGCCAACAGGA +
Preference number: 4 (lower is better)
Translates to: CSVPLGVWIPTFGILGKNLERVR*LVMPTG
Trigger: TCCTGTTGGCATCACCAAGCACCTAACTCTTTCTAG...ATTCTTCCCAAGGATCCCAAAAGTGGGAATCCAGACCCCAAGTGGAACACTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp GTCATGGTAGCTGCTGACCTCAGTTTTGACCGATTTGGCATCAGAAGGCAAATTTGCATCAGAGCTCTGTaGTCCAGCTTCTCTCTCGAT +
Preference number: 4 (lower is better)
Translates to: VMVAADLSFDRFGIRRQICIRAL*SSFSLD
Trigger: ATCGAGAGAGAAGCTGGAGCACAGAGCTCTGATGCA...AATTTGCCTTCTGATGCCAAATCGGTCAAAACTGAGGTCAGCAGCTACCATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp TGGGAAGGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACGCCAGGGGAAGATTGTaGAATTTCCTGGAATATGTC +
Preference number: 4 (lower is better)
Translates to: WEGLAALCGKQPWFQKHYARGRL*NFLEYV
Trigger: GACATATTCCAGGAAATTGCACAATCTTCCCCTGGC...GTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCCTTCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGACACGAACTCTTCCTCTaGCTGGTGGTGGCGGTCGTG +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRHELFL*LVVAVV
Trigger: CACGACCGCCACCACCAGGCAGAGGAAGAGTTCGTG...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676153.1
CDS-3UTR CCA 90 bp GCCACAGGAAAGCTCCAATATACTCTATTCATTGCTCAAGTGGACCTTAAAGAACCAGAGGGTCATCGGTaGTACCGTCTGGAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: ATGKLQYTLFIAQVDLKEPEGHR*YRLERR
Trigger: TCTCCTCTCCAGACGGTACCACCGATGACCCTCTGG...TTCTTTAAGGTCCACTTGAGCAATGAATAGAGTATATTGGAGCTTTCCTGTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp GTCATGGTAGCTGCTGACCTCAGTTTTGACCGATTTGGCATCAGAAGGCAAATTGAACTGCCCGTGGGGTaGACAAAGTTTTCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: VMVAADLSFDRFGIRRQIELPVG*TKFSVS
Trigger: AGAGACAGAAAACTTTGTCCACCCCACGGGCAGTTC...AATTTGCCTTCTGATGCCAAATCGGTCAAAACTGAGGTCAGCAGCTACCATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTTCGTCCACGCTCTTCTaGGCCTGCAGCTTGTCGGCT +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSSSTLF*ACSLSA
Trigger: AGCCGACAAGCTGCAGGCCCAGAAGAGCGTGGACGA...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGATCGTCCACGCTCTTCTaGGCCTGCAGCTTGTCGGCT +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRSSTLF*ACSLSA
Trigger: AGCCGACAAGCTGCAGGCCCAGAAGAGCGTGGACGA...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CCA 90 bp GTCTGTAAACACCACCTCACACTGAATACAAAAGCAGCTTCTACCCAGCTCTGGCTGACTCTAGCTGGATaGGAAGCTTGGAGAAGCTTT +
Preference number: 4 (lower is better)
Translates to: VCKHHLTLNTKAASTQLWLTLAG*EAWRSF
Trigger: AAAGCTTCTCCAAGCTTCCCATCCAGCTAGAGTCAG...CCAGAGCTGGGTAGAAGCTGCTTTTGTATTCAGTGTGAGGTGGTGTTTACAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTACTTGCCAGACGGTATaGCCTCCCAGAGGGTCATCG +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSTCQTV*PPRGSS
Trigger: CGATGACCCTCTGGGAGGTCATACCGTCTGGCAAGT...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR TCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAACTTGCCAGACGGTATaGCCTCCCAGAGGGTCATCG +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRTCQTV*PPRGSS
Trigger: CGATGACCCTCTGGGAGGTCATACCGTCTGGCAAGT...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR TCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGACCAGGATGTTGCCGATaGTGGTCACCAAGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRPGCCR*WSPRPG
Trigger: TCCTGGCCTTGGTGACCATCATCGGCAACATCCTGG...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR TCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTCCAGGATGTTGCCGATaGTGGTCACCAAGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSPGCCR*WSPRPG
Trigger: TCCTGGCCTTGGTGACCATCATCGGCAACATCCTGG...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR TCA 90 bp GGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACACTGGGCGTAAACAGATTCATTaGAATGACCCCGATAATCAG +
Preference number: 4 (lower is better)
Translates to: GLAALCGKQPWFQKHYTGRKQIH*NDPDNQ
Trigger: CTGATTATCGGGGTCATTTCAATGAATCTGTTTACG...CCCAGTGTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTTCCAGCTCTTGGTTGTaGACCAGAAGTGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSSSSWL*TRSGSG
Trigger: GCCGCTGCCACTTCTGGTTCACAACCAAGAGCTGGA...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR TCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGATCCAGCTCTTGGTTGTaGACCAGAAGTGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRSSSWL*TRSGSG
Trigger: GCCGCTGCCACTTCTGGTTCACAACCAAGAGCTGGA...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR TCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTTTGAGGATGGTGCTGTaGCCCGGAAGCTTGAGCACG +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSLRMVL*PGSLST
Trigger: CGTGCTCAAGCTTCCGGGTCACAGCACCATCCTCAA...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR TCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTCAAGCAAGATCGCACTaGGGGTCTGGGCCGCTTTCT +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSQARSH*GSGPLS
Trigger: AGAAAGCGGCCCAGACCCTCAGTGCGATCTTGCTTG...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR TCA 90 bp TGGGAAGGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACAAGCCCTATTTTCTTTaGGAAGGTGCCATTCAGCAA +
Preference number: 4 (lower is better)
Translates to: WEGLAALCGKQPWFQKHYKPYFL*EGAIQQ
Trigger: TTGCTGAATGGCACCTTCTCAAAGAAAATAGGGCTT...GTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCCTTCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp TGGGAAGGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACATACACAGACACCACTaGGTACACTTCTACTGTTGT +
Preference number: 4 (lower is better)
Translates to: WEGLAALCGKQPWFQKHYIHRHH*VHFYCC
Trigger: ACAACAGTAGAAGTGTACTCAGTGGTGTCTGTGTAT...GTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCCTTCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp TACCTAGAAACTCTATTTTGTGAGTTTGCCCGACCTCAGGTGCTGGGTTGGAGTAGCAGCATGGGACATTaGTGTGCACAGAATGTTGAT +
Preference number: 4 (lower is better)
Translates to: YLETLFCEFARPQVLGWSSSMGH*CAQNVD
Trigger: ATCAACATTCTGTGCACATCAATGTCCCATGCTGCT...ACTCCAACCCAGCACCTGAGGTCGGGCAAACTCACAAAATAGAGTTTCTAGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp TACCTAGAAACTCTATTTTGTGAGTTTGCCCGACCTCAGGTGCTGGGTTGGAGTGGGAGATCATGTGTTTaGTTGCTTGCAGAACAGGAT +
Preference number: 4 (lower is better)
Translates to: YLETLFCEFARPQVLGWSGRSCV*LLAEQD
Trigger: ATCCTGTTCTGCAAGCAATCAAACACATGATCTCCC...ACTCCAACCCAGCACCTGAGGTCGGGCAAACTCACAAAATAGAGTTTCTAGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTGACCAGATGTCAGGCTaGCCAAGAGACCAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSDQMSG*PRDQLH
Trigger: GTGGAGCTGGTCTCTTGGGCAGCCTGACATCTGGTC...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR GCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAGACCAGATGTCAGGCTaGCCAAGAGACCAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRDQMSG*PRDQLH
Trigger: GTGGAGCTGGTCTCTTGGGCAGCCTGACATCTGGTC...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR GCA 90 bp CTGATCCCTGGAATCCTTCTCTGTGCCACTCTGGTATTAGACTTCTCCGCTGTGGTTGTACTGTTATTGTaGAAGGTCATTGTGACTCTC +
Preference number: 4 (lower is better)
Translates to: LIPGILLCATLVLDFSAVVVLLL*KVIVTL
Trigger: GAGAGTCACAATGACCTTGCACAATAACAGTACAAC...CACAGCGGAGAAGTCTAATACCAGAGTGGCACAGAGAAGGATTCCAGGGATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp TGGGAAGGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACTGTTGGAGCGTTTCATaGTTTGCTGTTGAAGTTCGT +
Preference number: 4 (lower is better)
Translates to: WEGLAALCGKQPWFQKHYCWSVS*FAVEVR
Trigger: ACGAACTTCAACAGCAAAGCATGAAACGCTCCAACA...GTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCCTTCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTTCCTCCTCAGGCACCTaGAGGTTGTCCGATGAGGGT +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSSSSGT*RLSDEG
Trigger: ACCCTCATCGGACAACCTGCAGGTGCCTGAGGAGGA...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR GCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGATCCTCCTCAGGCACCTaGAGGTTGTCCGATGAGGGT +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRSSSGT*RLSDEG
Trigger: ACCCTCATCGGACAACCTGCAGGTGCCTGAGGAGGA...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR GCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAACGCTCTTCTGGGCCTaGAGCTTGTCGGCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRTLFWA*SLSAFL
Trigger: GAGGAAAGCCGACAAGCTGCAGGCCCAGAAGAGCGT...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR GCA 90 bp GCCACAGGAAAGCTCCAATATACTCTATTCATTGCTCAAGTGGACCTTAAAGAAGAGGTAGAGTGGCCGTaGTCTTACCCACTGAGGAGT +
Preference number: 4 (lower is better)
Translates to: ATGKLQYTLFIAQVDLKEEVEWP*SYPLRS
Trigger: ACTCCTCAGTGGGTAAGAGCACGGCCACTCTACCTC...TTCTTTAAGGTCCACTTGAGCAATGAATAGAGTATATTGGAGCTTTCCTGTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp AAAACCAAAGCAAACACCTGCTACCTAGAAACTCTATTTTGTGAGTTTGCCCGACAAGGCCTGCTCGGGTaGGCGCTTGTGAAAAATGAC +
Preference number: 4 (lower is better)
Translates to: KTKANTCYLETLFCEFARQGLLG*ALVKND
Trigger: GTCATTTTTCACAAGCGCGCACCCGAGCAGGCCTTG...TCGGGCAAACTCACAAAATAGAGTTTCTAGGTAGCAGGTGTTTGCTTTGGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp TACCTAGAAACTCTATTTTGTGAGTTTGCCCGACCTCAGGTGCTGGGTTGGAGTCTGTGGGTTGATGTGTaGGTTTTGTCACTGCTATTG +
Preference number: 4 (lower is better)
Translates to: YLETLFCEFARPQVLGWSLWVDV*VLSLLL
Trigger: CAATAGCAGTGACAAAACGCACACATCAACCCACAG...ACTCCAACCCAGCACCTGAGGTCGGGCAAACTCACAAAATAGAGTTTCTAGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp GGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACACTGGGGTTGCAGGAATAATTTaGCAGTTCAGTGTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: GLAALCGKQPWFQKHYTGVAGII*QFSVSH
Trigger: ATGGGAAACACTGAACTGGCAAATTATTCCTGCAAC...CCCAGTGTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp TGGGAAGGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACTGGAATCCTTCTCTGTaGCACTCTGGTATTAGACTT +
Preference number: 4 (lower is better)
Translates to: WEGLAALCGKQPWFQKHYWNPSL*HSGIRL
Trigger: AAGTCTAATACCAGAGTGGCACAGAGAAGGATTCCA...GTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCCTTCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp TGCAGTGTTCCACTTGGGGTCTGGATTCCCACTTTTGGGATCCTTGGGAAGAATTGGAATCCTTCTCTGTaGCACTCTGGTATTAGACTT +
Preference number: 4 (lower is better)
Translates to: CSVPLGVWIPTFGILGKNWNPSL*HSGIRL
Trigger: AAGTCTAATACCAGAGTGGCACAGAGAAGGATTCCA...ATTCTTCCCAAGGATCCCAAAAGTGGGAATCCAGACCCCAAGTGGAACACTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp GTCTGTAAACACCACCTCACACTGAATACAAAAGCAGCTTCTACCCAGCTCTGGGCCAGGGGAAGATTGTaGAATTTCCTGGAATATGTC +
Preference number: 4 (lower is better)
Translates to: VCKHHLTLNTKAASTQLWARGRL*NFLEYV
Trigger: GACATATTCCAGGAAATTGCACAATCTTCCCCTGGC...CCAGAGCTGGGTAGAAGCTGCTTTTGTATTCAGTGTGAGGTGGTGTTTACAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp GGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACACTGGGTGCGAGTATGATACATaGCCTTTGCTTACAAAGCAA +
Preference number: 4 (lower is better)
Translates to: GLAALCGKQPWFQKHYTGCEYDT*PLLTKQ
Trigger: TTGCTTTGTAAGCAAAGGGCATGTATCATACTCGCA...CCCAGTGTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp TGGGAAGGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACGGACACTGTTTTAGATaGGAGTATGATACATGCCCT +
Preference number: 4 (lower is better)
Translates to: WEGLAALCGKQPWFQKHYGHCFR*EYDTCP
Trigger: AGGGCATGTATCATACTCGCATCTAAAACAGTGTCC...GTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCCTTCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTCCAGAGGGTCATCGGTaGTACCGTCTGGAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSPEGHR*YRLERR
Trigger: TCTCCTCTCCAGACGGTACCACCGATGACCCTCTGG...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGACCAGAGGGTCATCGGTaGTACCGTCTGGAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRPEGHR*YRLERR
Trigger: TCTCCTCTCCAGACGGTACCACCGATGACCCTCTGG...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTCTGCTGCTGTGGTCTTaGTCCATCTGCTCGGAGCTG +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSLLLWS*SICSEL
Trigger: CAGCTCCGAGCAGATGGACCAAGACCACAGCAGCAG...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGACTGCTGCTGTGGTCTTaGTCCATCTGCTCGGAGCTG +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRLLLWS*SICSEL
Trigger: CAGCTCCGAGCAGATGGACCAAGACCACAGCAGCAG...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CCA 90 bp AAAACCAAAGCAAACACCTGCTACCTAGAAACTCTATTTTGTGAGTTTGCCCGACTGTCACTGCTGCTGTaGTCTTGGTCCATCTGCTCG +
Preference number: 4 (lower is better)
Translates to: KTKANTCYLETLFCEFARLSLLL*SWSICS
Trigger: CGAGCAGATGGACCAAGACCACAGCAGCAGTGACAG...TCGGGCAAACTCACAAAATAGAGTTTCTAGGTAGCAGGTGTTTGCTTTGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp GAGTGGTATTTGAAACCATACTACTCCGGGTTTGCCAACAAATTTCAAAGCTTCGCACGATGGAGTAGATaGCTCTCGTCTCGGAGCCAA +
Preference number: 4 (lower is better)
Translates to: EWYLKPYYSGFANKFQSFARWSR*LSSRSQ
Trigger: TTGGCTCCGAGACGAGAGCCATCTACTCCATCGTGC...GAAGCTTTGAAATTTGTTGGCAAACCCGGAGTAGTATGGTTTCAAATACCACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp GTCATGGTAGCTGCTGACCTCAGTTTTGACCGATTTGGCATCAGAAGGCAAATTCTGACTCTAGCTGGATaGGAAGCTTGGAGAAGCTTT +
Preference number: 4 (lower is better)
Translates to: VMVAADLSFDRFGIRRQILTLAG*EAWRSF
Trigger: AAAGCTTCTCCAAGCTTCCCATCCAGCTAGAGTCAG...AATTTGCCTTCTGATGCCAAATCGGTCAAAACTGAGGTCAGCAGCTACCATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp GGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACACTGGGGATTCCAAAAGGTTTTaGGTATGCAGCTGTCACAAA +
Preference number: 4 (lower is better)
Translates to: GLAALCGKQPWFQKHYTGDSKRF*VCSCHK
Trigger: TTTGTGACAGCTGCATACCCAAAACCTTTTGGAATC...CCCAGTGTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAACCGACTGTCTCTGCTaGTACTGCTGCTTGCGCCTC +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRTDCLC*YCCLRL
Trigger: GAGGCGCAAGCAGCAGTACCAGCAGAGACAGTCGGT...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTACCGACTGTCTCTGCTaGTACTGCTGCTTGCGCCTC +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSTDCLC*YCCLRL
Trigger: GAGGCGCAAGCAGCAGTACCAGCAGAGACAGTCGGT...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CCA 90 bp TGCAGTGTTCCACTTGGGGTCTGGATTCCCACTTTTGGGATCCTTGGGAAGAATTTTCAGACACAATGGTaGAGCTTTGTTCAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: CSVPLGVWIPTFGILGKNFQTQW*SFVQFP
Trigger: TGGGAACTGAACAAAGCTCCACCATTGTGTCTGAAA...ATTCTTCCCAAGGATCCCAAAAGTGGGAATCCAGACCCCAAGTGGAACACTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp GTCATGGTAGCTGCTGACCTCAGTTTTGACCGATTTGGCATCAGAAGGCAAATTCCATCTGGCAATGCCTaGAGAATGGAGATTGAGTGT +
Preference number: 4 (lower is better)
Translates to: VMVAADLSFDRFGIRRQIPSGNA*RMEIEC
Trigger: ACACTCAATCTCCATTCTCCAGGCATTGCCAGATGG...AATTTGCCTTCTGATGCCAAATCGGTCAAAACTGAGGTCAGCAGCTACCATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp GTCTGTAAACACCACCTCACACTGAATACAAAAGCAGCTTCTACCCAGCTCTGGGGTGCTGGGTTGGAGTaGTATTTGAAACCATACTAC +
Preference number: 4 (lower is better)
Translates to: VCKHHLTLNTKAASTQLWGAGLE*YLKPYY
Trigger: GTAGTATGGTTTCAAATACCACTCCAACCCAGCACC...CCAGAGCTGGGTAGAAGCTGCTTTTGTATTCAGTGTGAGGTGGTGTTTACAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp AACAAAGGAGGTTGCTTAACACCAAGTCTGGCGAAGCCACGGCGCTCAGCTGACAGTTCTAAAGAACATTaGGTTACCATTCTAGAAACC +
Preference number: 4 (lower is better)
Translates to: NKGGCLTPSLAKPRRSADSSKEH*VTILET
Trigger: GGTTTCTAGAATGGTAACCCAATGTTCTTTAGAACT...GTCAGCTGAGCGCCGTGGCTTCGCCAGACTTGGTGTTAAGCAACCTCCTTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp AAAACCAAAGCAAACACCTGCTACCTAGAAACTCTATTTTGTGAGTTTGCCCGACAAAGTCCTTCTTTCTaGCAGCTGCGCTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: KTKANTCYLETLFCEFARQSPSF*QLRSRW
Trigger: CCACCTGGAGCGCAGCTGCCAGAAAGAAGGACTTTG...TCGGGCAAACTCACAAAATAGAGTTTCTAGGTAGCAGGTGTTTGCTTTGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676153.1
CDS-3UTR TCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTGGCTCACTGAGGAACTaGATGAAGCACTCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSGSLRN*MKHSPG
Trigger: TCCGGGAGAGTGCTTCATTCAGTTCCTCAGTGAGCC...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR TCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAGGCTCACTGAGGAACTaGATGAAGCACTCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRGSLRN*MKHSPG
Trigger: TCCGGGAGAGTGCTTCATTCAGTTCCTCAGTGAGCC...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR TCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGATGTGACCCGGAAGCTTaGGCACGATGGAGTAGATGG +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRCDPEA*ARWSRW
Trigger: CCATCTACTCCATCGTGCTCAAGCTTCCGGGTCACA...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR TCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTTGTGACCCGGAAGCTTaGGCACGATGGAGTAGATGG +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSCDPEA*ARWSRW
Trigger: CCATCTACTCCATCGTGCTCAAGCTTCCGGGTCACA...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR TCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTGTAACTTGGTGGAGTTaGGGATGGTGCTGTGACCCG +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSVTWWS*GWCCDP
Trigger: CGGGTCACAGCACCATCCTCAACTCCACCAAGTTAC...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR TCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAGTAACTTGGTGGAGTTaGGGATGGTGCTGTGACCCG +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRVTWWS*GWCCDP
Trigger: CGGGTCACAGCACCATCCTCAACTCCACCAAGTTAC...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR TCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTCCAGAGTGGCTTCCTTaGAGGACAGAGGTAGAGTGG +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSPEWLP*RTEVEW
Trigger: CCACTCTACCTCTGTCCTTCAAGGAAGCCACTCTGG...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR TCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGACCAGAGTGGCTTCCTTaGAGGACAGAGGTAGAGTGG +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRPEWLP*RTEVEW
Trigger: CCACTCTACCTCTGTCCTTCAAGGAAGCCACTCTGG...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR TCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTTCGGGTGCGCGCTTGTaGAAAATGACCGACTGTCTC +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSSGARL*KMTDCL
Trigger: GAGACAGTCGGTCATTTTTCACAAGCGCGCACCCGA...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR TCA 90 bp TACCTAGAAACTCTATTTTGTGAGTTTGCCCGACCTCAGGTGCTGGGTTGGAGTAACACCACCTCACACTaGATACAAAAGCAGCTTCTA +
Preference number: 4 (lower is better)
Translates to: YLETLFCEFARPQVLGWSNTTSH*IQKQLL
Trigger: TAGAAGCTGCTTTTGTATTCAGTGTGAGGTGGTGTT...ACTCCAACCCAGCACCTGAGGTCGGGCAAACTCACAAAATAGAGTTTCTAGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp TACCTAGAAACTCTATTTTGTGAGTTTGCCCGACCTCAGGTGCTGGGTTGGAGTCTTAAAGAATCACTTTaGAAGGACACCATGGCTGAC +
Preference number: 4 (lower is better)
Translates to: YLETLFCEFARPQVLGWSLKESL*KDTMAD
Trigger: GTCAGCCATGGTGTCCTTTCAAAGTGATTCTTTAAG...ACTCCAACCCAGCACCTGAGGTCGGGCAAACTCACAAAATAGAGTTTCTAGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp AAAACCAAAGCAAACACCTGCTACCTAGAAACTCTATTTTGTGAGTTTGCCCGATCCCTGAGTCAGAGCTaGAACAGCCAACTGTGCATC +
Preference number: 4 (lower is better)
Translates to: KTKANTCYLETLFCEFARSLSQS*NSQLCI
Trigger: GATGCACAGTTGGCTGTTTCAGCTCTGACTCAGGGA...TCGGGCAAACTCACAAAATAGAGTTTCTAGGTAGCAGGTGTTTGCTTTGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp AAAACCAAAGCAAACACCTGCTACCTAGAAACTCTATTTTGTGAGTTTGCCCGAACAGGACACCCTGACTaGTCCCTGGAATCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: KTKANTCYLETLFCEFARTGHPD*SLESFS
Trigger: AGAGAAGGATTCCAGGGATCAGTCAGGGTGTCCTGT...TCGGGCAAACTCACAAAATAGAGTTTCTAGGTAGCAGGTGTTTGCTTTGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp GCCACAGGAAAGCTCCAATATACTCTATTCATTGCTCAAGTGGACCTTAAAGAAACAGGACACCCTGACTaGTCCCTGGAATCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: ATGKLQYTLFIAQVDLKETGHPD*SLESFS
Trigger: AGAGAAGGATTCCAGGGATCAGTCAGGGTGTCCTGT...TTCTTTAAGGTCCACTTGAGCAATGAATAGAGTATATTGGAGCTTTCCTGTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp GTCATGGTAGCTGCTGACCTCAGTTTTGACCGATTTGGCATCAGAAGGCAAATTAATGCTGGGAGAGGCTaGAGATTTAGAGTCATCAGA +
Preference number: 4 (lower is better)
Translates to: VMVAADLSFDRFGIRRQINAGRG*RFRVIR
Trigger: TCTGATGACTCTAAATCTTCAGCCTCTCCCAGCATT...AATTTGCCTTCTGATGCCAAATCGGTCAAAACTGAGGTCAGCAGCTACCATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp GTCTGTAAACACCACCTCACACTGAATACAAAAGCAGCTTCTACCCAGCTCTGGACACTTGCTCATTTCTaGGCCGTACAACAAAACACT +
Preference number: 4 (lower is better)
Translates to: VCKHHLTLNTKAASTQLWTLAHF*AVQQNT
Trigger: AGTGTTTTGTTGTACGGCTCAGAAATGAGCAAGTGT...CCAGAGCTGGGTAGAAGCTGCTTTTGTATTCAGTGTGAGGTGGTGTTTACAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp TACCTAGAAACTCTATTTTGTGAGTTTGCCCGACCTCAGGTGCTGGGTTGGAGTACACTTGCTCATTTCTaGGCCGTACAACAAAACACT +
Preference number: 4 (lower is better)
Translates to: YLETLFCEFARPQVLGWSTLAHF*AVQQNT
Trigger: AGTGTTTTGTTGTACGGCTCAGAAATGAGCAAGTGT...ACTCCAACCCAGCACCTGAGGTCGGGCAAACTCACAAAATAGAGTTTCTAGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp GCCACAGGAAAGCTCCAATATACTCTATTCATTGCTCAAGTGGACCTTAAAGAATGCCCATGTACTGGATaGGGAATGGCTAGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: ATGKLQYTLFIAQVDLKECPCTG*GMARRE
Trigger: CTCCCTTCTAGCCATTCCTCATCCAGTACATGGGCA...TTCTTTAAGGTCCACTTGAGCAATGAATAGAGTATATTGGAGCTTTCCTGTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTTGCAGCTTCGAGAACTaGCCGTGGGGTGGACAAAGT +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSCSFEN*PWGGQS
Trigger: ACTTTGTCCACCCCACGGGCAGTTCTCGAAGCTGCA...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR GCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGATGCAGCTTCGAGAACTaGCCGTGGGGTGGACAAAGT +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRCSFEN*PWGGQS
Trigger: ACTTTGTCCACCCCACGGGCAGTTCTCGAAGCTGCA...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR GCA 90 bp TACCTAGAAACTCTATTTTGTGAGTTTGCCCGACCTCAGGTGCTGGGTTGGAGTTGTTGGAGCGTTTCATaGTTTGCTGTTGAAGTTCGT +
Preference number: 4 (lower is better)
Translates to: YLETLFCEFARPQVLGWSCWSVS*FAVEVR
Trigger: ACGAACTTCAACAGCAAAGCATGAAACGCTCCAACA...ACTCCAACCCAGCACCTGAGGTCGGGCAAACTCACAAAATAGAGTTTCTAGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTTGGTCTTGGTCCATCTaGTCGGAGCTGGGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSWSWSI*SELGFQ
Trigger: CTGGAAACCCAGCTCCGAGCAGATGGACCAAGACCA...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR GCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGATGGTCTTGGTCCATCTaGTCGGAGCTGGGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRWSWSI*SELGFQ
Trigger: CTGGAAACCCAGCTCCGAGCAGATGGACCAAGACCA...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR GCA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCACGCTCTTCTGGGCCTaGAGCTTGTCGGCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFTLFWA*SLSAFL
Trigger: GAGGAAAGCCGACAAGCTGCAGGCCCAGAAGAGCGT...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTGAGGTAGAGTGGCCGTaGTCTTACCCACTGAGGAGT +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSEVEWP*SYPLRS
Trigger: ACTCCTCAGTGGGTAAGAGCACGGCCACTCTACCTC...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR GCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAGAGGTAGAGTGGCCGTaGTCTTACCCACTGAGGAGT +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITREVEWP*SYPLRS
Trigger: ACTCCTCAGTGGGTAAGAGCACGGCCACTCTACCTC...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR GCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTATGACCGACTGTCTCTaGTGGTACTGCTGCTTGCGC +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSMTDCL*WYCCLR
Trigger: GCGCAAGCAGCAGTACCAGCAGAGACAGTCGGTCAT...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR GCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAATGACCGACTGTCTCTaGTGGTACTGCTGCTTGCGC +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRMTDCL*WYCCLR
Trigger: GCGCAAGCAGCAGTACCAGCAGAGACAGTCGGTCAT...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR GCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTCAAGGCCTGCTCGGGTaGGCGCTTGTGAAAAATGAC +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSQGLLG*ALVKND
Trigger: GTCATTTTTCACAAGCGCGCACCCGAGCAGGCCTTG...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR GCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGACAAGGCCTGCTCGGGTaGGCGCTTGTGAAAAATGAC +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRQGLLG*ALVKND
Trigger: GTCATTTTTCACAAGCGCGCACCCGAGCAGGCCTTG...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR GCA 90 bp GTCATGGTAGCTGCTGACCTCAGTTTTGACCGATTTGGCATCAGAAGGCAAATTCTGTGGGTTGATGTGTaGGTTTTGTCACTGCTATTG +
Preference number: 4 (lower is better)
Translates to: VMVAADLSFDRFGIRRQILWVDV*VLSLLL
Trigger: CAATAGCAGTGACAAAACGCACACATCAACCCACAG...AATTTGCCTTCTGATGCCAAATCGGTCAAAACTGAGGTCAGCAGCTACCATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp GTCATGGTAGCTGCTGACCTCAGTTTTGACCGATTTGGCATCAGAAGGCAAATTCTAGAAAGAGTTAGGTaGTTGGTGATGCCAACAGGA +
Preference number: 4 (lower is better)
Translates to: VMVAADLSFDRFGIRRQILERVR*LVMPTG
Trigger: TCCTGTTGGCATCACCAAGCACCTAACTCTTTCTAG...AATTTGCCTTCTGATGCCAAATCGGTCAAAACTGAGGTCAGCAGCTACCATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp TGCAGTGTTCCACTTGGGGTCTGGATTCCCACTTTTGGGATCCTTGGGAAGAATATTATTCCTCAAGCCTaGACCAAACTTGGTAACAGT +
Preference number: 4 (lower is better)
Translates to: CSVPLGVWIPTFGILGKNIIPQA*TKLGNS
Trigger: ACTGTTACCAAGTTTGGTGCAGGCTTGAGGAATAAT...ATTCTTCCCAAGGATCCCAAAAGTGGGAATCCAGACCCCAAGTGGAACACTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp GTCATGGTAGCTGCTGACCTCAGTTTTGACCGATTTGGCATCAGAAGGCAAATTCATCTGTTTTTGGACTaGGGTTTCTCTATCCACCAG +
Preference number: 4 (lower is better)
Translates to: VMVAADLSFDRFGIRRQIHLFLD*GFSIHQ
Trigger: CTGGTGGATAGAGAAACCGCAGTCCAAAAACAGATG...AATTTGCCTTCTGATGCCAAATCGGTCAAAACTGAGGTCAGCAGCTACCATGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp TGGGAAGGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACTGCGAGTATGATACATaGCCTTTGCTTACAAAGCAA +
Preference number: 4 (lower is better)
Translates to: WEGLAALCGKQPWFQKHYCEYDT*PLLTKQ
Trigger: TTGCTTTGTAAGCAAAGGGCATGTATCATACTCGCA...GTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCCTTCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTCATAGGACAGAGGAGTaGACCAGATGTCAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSHRTEE*TRCQAA
Trigger: GGCAGCCTGACATCTGGTCCACTCCTCTGTCCTATG...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CCA 90 bp AAAACCAAAGCAAACACCTGCTACCTAGAAACTCTATTTTGTGAGTTTGCCCGAATCGGTGGTACCGTCTaGAGAGGAGAAATTGCCAGC +
Preference number: 4 (lower is better)
Translates to: KTKANTCYLETLFCEFARIGGTV*RGEIAS
Trigger: GCTGGCAATTTCTCCTCTCCAGACGGTACCACCGAT...TCGGGCAAACTCACAAAATAGAGTTTCTAGGTAGCAGGTGTTTGCTTTGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTCCATCTGCTCGGAGCTaGGTTTCCAGCTCTTGGTTG +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSPSARS*VSSSWL
Trigger: CAACCAAGAGCTGGAAACCCAGCTCCGAGCAGATGG...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGACCATCTGCTCGGAGCTaGGTTTCCAGCTCTTGGTTG +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRPSARS*VSSSWL
Trigger: CAACCAAGAGCTGGAAACCCAGCTCCGAGCAGATGG...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGACTGTCACTGCTGCTGTaGTCTTGGTCCATCTGCTCG +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRLSLLL*SWSICS
Trigger: CGAGCAGATGGACCAAGACCACAGCAGCAGTGACAG...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTGCACGATGGAGTAGATaGCTCTCGTCTCGGAGCCAA +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSARWSR*LSSRSQ
Trigger: TTGGCTCCGAGACGAGAGCCATCTACTCCATCGTGC...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAGCACGATGGAGTAGATaGCTCTCGTCTCGGAGCCAA +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRARWSR*LSSRSQ
Trigger: TTGGCTCCGAGACGAGAGCCATCTACTCCATCGTGC...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CCA 90 bp GAGTGGTATTTGAAACCATACTACTCCGGGTTTGCCAACAAATTTCAAAGCTTCACGGCTGACTCTAGCTaGATGGGAAGCTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: EWYLKPYYSGFANKFQSFTADSS*MGSLEK
Trigger: CTTCTCCAAGCTTCCCATCCAGCTAGAGTCAGCCGT...GAAGCTTTGAAATTTGTTGGCAAACCCGGAGTAGTATGGTTTCAAATACCACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGGACAGAGGTAGAGTaGCCGTGCTCTTACCCACTG +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRRTEVE*PCSYPL
Trigger: CAGTGGGTAAGAGCACGGCCACTCTACCTCTGTCCT...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTAGGACAGAGGTAGAGTaGCCGTGCTCTTACCCACTG +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSRTEVE*PCSYPL
Trigger: CAGTGGGTAAGAGCACGGCCACTCTACCTCTGTCCT...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CCA 90 bp TGGGAAGGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACCCAGGCAAATCACTTTaGGTATATAATTGCCGTCAA +
Preference number: 4 (lower is better)
Translates to: WEGLAALCGKQPWFQKHYPGKSL*VYNCRQ
Trigger: TTGACGGCAATTATATACCCAAAGTGATTTGCCTGG...GTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCCTTCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp CTGATCCCTGGAATCCTTCTCTGTGCCACTCTGGTATTAGACTTCTCCGCTGTGTGTGGAAAACAGCCCTaGTTTCAAAAACATTACACT +
Preference number: 4 (lower is better)
Translates to: LIPGILLCATLVLDFSAVCGKQP*FQKHYT
Trigger: AGTGTAATGTTTTTGAAACCAGGGCTGTTTTCCACA...CACAGCGGAGAAGTCTAATACCAGAGTGGCACAGAGAAGGATTCCAGGGATCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp TACCTAGAAACTCTATTTTGTGAGTTTGCCCGACCTCAGGTGCTGGGTTGGAGTAACACCAGAAAGCACTaGCCACAGCTGATTAACAAA +
Preference number: 4 (lower is better)
Translates to: YLETLFCEFARPQVLGWSNTRKH*PQLINK
Trigger: TTTGTTAATCAGCTGTGGCCAGTGCTTTCTGGTGTT...ACTCCAACCCAGCACCTGAGGTCGGGCAAACTCACAAAATAGAGTTTCTAGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp TACCTAGAAACTCTATTTTGTGAGTTTGCCCGACCTCAGGTGCTGGGTTGGAGTTTTCAGACACAATGGTaGAGCTTTGTTCAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: YLETLFCEFARPQVLGWSFQTQW*SFVQFP
Trigger: TGGGAACTGAACAAAGCTCCACCATTGTGTCTGAAA...ACTCCAACCCAGCACCTGAGGTCGGGCAAACTCACAAAATAGAGTTTCTAGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTCAAAGTCCTTCTTTCTaGCAGCTGCGCTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSQSPSF*QLRSRW
Trigger: CCACCTGGAGCGCAGCTGCCAGAAAGAAGGACTTTG...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675184.1
ENST00000676153.1
CDS-3UTR TCA 90 bp AAAACCAAAGCAAACACCTGCTACCTAGAAACTCTATTTTGTGAGTTTGCCCGAGTATCCAGGAGGAGCTaGTGTTTGGAAACAAAGGCG +
Preference number: 4 (lower is better)
Translates to: KTKANTCYLETLFCEFARVSRRS*CLETKA
Trigger: CGCCTTTGTTTCCAAACATCAGCTCCTCCTGGATAC...TCGGGCAAACTCACAAAATAGAGTTTCTAGGTAGCAGGTGTTTGCTTTGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTCCGTTAAGAAAGCGATaGAGACCACTTGCCAGACGG +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSPLRKR*RPLARR
Trigger: CCGTCTGGCAAGTGGTCTTCATCGCTTTCTTAACGG...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR TCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGACCGTTAAGAAAGCGATaGAGACCACTTGCCAGACGG +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRPLRKR*RPLARR
Trigger: CCGTCTGGCAAGTGGTCTTCATCGCTTTCTTAACGG...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR TCA 90 bp TGGGAAGGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACCTTGTTGACCTTAAATaGCACAATTACCAGGATGTT +
Preference number: 4 (lower is better)
Translates to: WEGLAALCGKQPWFQKHYLVDLK*HNYQDV
Trigger: AACATCCTGGTAATTGTGTCATTTAAGGTCAACAAG...GTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCCTTCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp TACCTAGAAACTCTATTTTGTGAGTTTGCCCGACCTCAGGTGCTGGGTTGGAGTCGTAAACAGATTCATTaGAATGACCCCGATAATCAG +
Preference number: 4 (lower is better)
Translates to: YLETLFCEFARPQVLGWSRKQIH*NDPDNQ
Trigger: CTGATTATCGGGGTCATTTCAATGAATCTGTTTACG...ACTCCAACCCAGCACCTGAGGTCGGGCAAACTCACAAAATAGAGTTTCTAGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCGTAACTTGGTGGAGTTaGGGATGGTGCTGTGACCCG +
Preference number: 4 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFVTWWS*GWCCDP
Trigger: CGGGTCACAGCACCATCCTCAACTCCACCAAGTTAC...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTCGTGCTCTTACCCACTaGGGAGTTGACGTCAGAAGT +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSRALTH*GVDVRS
Trigger: ACTTCTGACGTCAACTCCTCAGTGGGTAAGAGCACG...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR TCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTCCGCTTTCTTCTCCTTaGCCAGGGACATCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSPLSSP*PGTSFS
Trigger: GGAAAAGGATGTCCCTGGTCAAGGAGAAGAAAGCGG...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR TCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGACCGCTTTCTTCTCCTTaGCCAGGGACATCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRPLSSP*PGTSFS
Trigger: GGAAAAGGATGTCCCTGGTCAAGGAGAAGAAAGCGG...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR TCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTCGCGCTTGTGAAAAATaGCCGACTGTCTCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSRACEK*PTVSAG
Trigger: ACCAGCAGAGACAGTCGGTCATTTTTCACAAGCGCG...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR TCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGACGCGCTTGTGAAAAATaGCCGACTGTCTCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRRACEK*PTVSAG
Trigger: ACCAGCAGAGACAGTCGGTCATTTTTCACAAGCGCG...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR TCA 90 bp TGGGAAGGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACATTCCCAATTTGGGATaGAGACATTTTGATCTTAGG +
Preference number: 4 (lower is better)
Translates to: WEGLAALCGKQPWFQKHYIPNLG*RHFDLR
Trigger: CCTAAGATCAAAATGTCTTCATCCCAAATTGGGAAT...GTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCCTTCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTTCCTTCTTTCCTCCCTaGGTCAGAGCTGAAACAGCC +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSSFFPP*VRAETA
Trigger: GGCTGTTTCAGCTCTGACTCAGGGAGGAAAGAAGGA...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp TACCTAGAAACTCTATTTTGTGAGTTTGCCCGACCTCAGGTGCTGGGTTGGAGTATATGTCCCCATCCTTaGATCATCTCTACTCAGATA +
Preference number: 4 (lower is better)
Translates to: YLETLFCEFARPQVLGWSICPHP*IISTQI
Trigger: TATCTGAGTAGAGATGATTCAAGGATGGGGACATAT...ACTCCAACCCAGCACCTGAGGTCGGGCAAACTCACAAAATAGAGTTTCTAGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp TGCAGTGTTCCACTTGGGGTCTGGATTCCCACTTTTGGGATCCTTGGGAAGAATAGCAACGCATTTGGATaGCTTCCATATATCCAAATA +
Preference number: 4 (lower is better)
Translates to: CSVPLGVWIPTFGILGKNSNAFG*LPYIQI
Trigger: TATTTGGATATATGGAAGTCATCCAAATGCGTTGCT...ATTCTTCCCAAGGATCCCAAAAGTGGGAATCCAGACCCCAAGTGGAACACTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAGAAGTTCGTAACTGCTaGAGCTTCGAGAACTGCCCG +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITREVRNC*SFENCP
Trigger: CGGGCAGTTCTCGAAGCTGCAGCAGTTACGAACTTC...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR GCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTGAAGTTCGTAACTGCTaGAGCTTCGAGAACTGCCCG +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSEVRNC*SFENCP
Trigger: CGGGCAGTTCTCGAAGCTGCAGCAGTTACGAACTTC...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR GCA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCTGGTCTTGGTCCATCTaGTCGGAGCTGGGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFWSWSI*SELGFQ
Trigger: CTGGAAACCCAGCTCCGAGCAGATGGACCAAGACCA...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp GACCTAGAGTCTTGGATTTGTTCCTTTTCTGCTATTATTAGCATCACAAAAGGAATGACCGACTGTCTCTaGTGGTACTGCTGCTTGCGC +
Preference number: 4 (lower is better)
Translates to: DLESWICSFSAIISITKGMTDCL*WYCCLR
Trigger: GCGCAAGCAGCAGTACCAGCAGAGACAGTCGGTCAT...TCCTTTTGTGATGCTAATAATAGCAGAAAAGGAACAAATCCAAGACTCTAGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp TGCAGTGTTCCACTTGGGGTCTGGATTCCCACTTTTGGGATCCTTGGGAAGAATACTGAAAGCGTATGTTaGAGGAATAATTTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: CSVPLGVWIPTFGILGKNTESVC*RNNLPV
Trigger: AACTGGCAAATTATTCCTGCAACATACGCTTTCAGT...ATTCTTCCCAAGGATCCCAAAAGTGGGAATCCAGACCCCAAGTGGAACACTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp TGGGAAGGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACATACTACTCCGGGTTTaGCAACAAATTTCAAAGCTT +
Preference number: 4 (lower is better)
Translates to: WEGLAALCGKQPWFQKHYILLRV*QQISKL
Trigger: AAGCTTTGAAATTTGTTGGCAAACCCGGAGTAGTAT...GTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCCTTCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp GTCTGTAAACACCACCTCACACTGAATACAAAAGCAGCTTCTACCCAGCTCTGGAACCTTTCTCAGGTCTaGAATGTTGACTCACACATT +
Preference number: 4 (lower is better)
Translates to: VCKHHLTLNTKAASTQLWNLSQV*NVDSHI
Trigger: AATGTGTGAGTCAACATTGCAGACCTGAGAAAGGTT...CCAGAGCTGGGTAGAAGCTGCTTTTGTATTCAGTGTGAGGTGGTGTTTACAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp GGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACACTGGGTGTGAACGTGATGTGTaGCTAATAATACTAACACTT +
Preference number: 4 (lower is better)
Translates to: GLAALCGKQPWFQKHYTGCERDV*LIILTL
Trigger: AAGTGTTAGTATTATTAGGCACACATCACGTTCACA...CCCAGTGTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp TGGGAAGGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACGATCATGTGTTTGATTaGTTGCAGAACAGGATAAAG +
Preference number: 4 (lower is better)
Translates to: WEGLAALCGKQPWFQKHYDHVFD*LQNRIK
Trigger: CTTTATCCTGTTCTGCAAGCAATCAAACACATGATC...GTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCCTTCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp TACCTAGAAACTCTATTTTGTGAGTTTGCCCGACCTCAGGTGCTGGGTTGGAGTATTATTCCTCAAGCCTaGACCAAACTTGGTAACAGT +
Preference number: 4 (lower is better)
Translates to: YLETLFCEFARPQVLGWSIIPQA*TKLGNS
Trigger: ACTGTTACCAAGTTTGGTGCAGGCTTGAGGAATAAT...ACTCCAACCCAGCACCTGAGGTCGGGCAAACTCACAAAATAGAGTTTCTAGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp GAGTGGTATTTGAAACCATACTACTCCGGGTTTGCCAACAAATTTCAAAGCTTCTCCCTGAGAGCTTCCTaGCAAGAGAAATCAGCATGC +
Preference number: 4 (lower is better)
Translates to: EWYLKPYYSGFANKFQSFSLRAS*QEKSAC
Trigger: GCATGCTGATTTCTCTTGGCAGGAAGCTCTCAGGGA...GAAGCTTTGAAATTTGTTGGCAAACCCGGAGTAGTATGGTTTCAAATACCACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp AAAACCAAAGCAAACACCTGCTACCTAGAAACTCTATTTTGTGAGTTTGCCCGAGTGACACACCTGAAATaGCTACTGAGGAAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: KTKANTCYLETLFCEFARVTHLK*LLRKCW
Trigger: CCAGCACTTCCTCAGTAGGCATTTCAGGTGTGTCAC...TCGGGCAAACTCACAAAATAGAGTTTCTAGGTAGCAGGTGTTTGCTTTGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGATGCCTATGGAGCCTTTaGTTCCACTCCCCTTGTACC +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRCLWSL*FHSPCT
Trigger: GGTACAAGGGGAGTGGAAGCAAAGGCTCCATAGGCA...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000676433.1
CDS-3UTR CCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTATCGGTGGTACCGTCTaGAGAGGAGAAATTGCCAGC +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSIGGTV*RGEIAS
Trigger: GCTGGCAATTTCTCCTCTCCAGACGGTACCACCGAT...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAATCGGTGGTACCGTCTaGAGAGGAGAAATTGCCAGC +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRIGGTV*RGEIAS
Trigger: GCTGGCAATTTCTCCTCTCCAGACGGTACCACCGAT...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAACGGCTGACTCTAGCTaGATGGGAAGCTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRTADSS*MGSLEK
Trigger: CTTCTCCAAGCTTCCCATCCAGCTAGAGTCAGCCGT...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTACGGCTGACTCTAGCTaGATGGGAAGCTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSTADSS*MGSLEK
Trigger: CTTCTCCAAGCTTCCCATCCAGCTAGAGTCAGCCGT...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CCA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCAGGACAGAGGTAGAGTaGCCGTGCTCTTACCCACTG +
Preference number: 4 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFRTEVE*PCSYPL
Trigger: CAGTGGGTAAGAGCACGGCCACTCTACCTCTGTCCT...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp TACCTAGAAACTCTATTTTGTGAGTTTGCCCGACCTCAGGTGCTGGGTTGGAGTGATTCCAAAAGGTTTTaGGTATGCAGCTGTCACAAA +
Preference number: 4 (lower is better)
Translates to: YLETLFCEFARPQVLGWSDSKRF*VCSCHK
Trigger: TTTGTGACAGCTGCATACCCAAAACCTTTTGGAATC...ACTCCAACCCAGCACCTGAGGTCGGGCAAACTCACAAAATAGAGTTTCTAGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp GTCATGGTAGCTGCTGACCTCAGTTTTGACCGATTTGGCATCAGAAGGCAAATTGACAGGAAGCTCTATTaGGACAAGAAGATTCAGCTT +
Preference number: 4 (lower is better)
Translates to: VMVAADLSFDRFGIRRQIDRKLY*DKKIQL
Trigger: AAGCTGAATCTTCTTGTCCCAATAGAGCTTCCTGTC...AATTTGCCTTCTGATGCCAAATCGGTCAAAACTGAGGTCAGCAGCTACCATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTGCTTCTACCCAGCTCTaGGTTCACAACACGAATGCC +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSASTQL*VHNTNA
Trigger: GGCATTCGTGTTGTGAACCCAGAGCTGGGTAGAAGC...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp GGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACACTGGGCAAACCTCATGCATATaGCATGAAATAATTCGATTC +
Preference number: 4 (lower is better)
Translates to: GLAALCGKQPWFQKHYTGQTSCI*HEIIRF
Trigger: GAATCGAATTATTTCATGCCATATGCATGAGGTTTG...CCCAGTGTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTCCCGACCTCAGGTGCTaGGTTGGAGTGGTATTTGAA +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSPDLRC*VGVVFE
Trigger: TTCAAATACCACTCCAACCCAGCACCTGAGGTCGGG...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp GTCTGTAAACACCACCTCACACTGAATACAAAAGCAGCTTCTACCCAGCTCTGGTTGTGTGAGTCTCTGTaGTTCTACCAGAACAAACAT +
Preference number: 4 (lower is better)
Translates to: VCKHHLTLNTKAASTQLWLCESL*FYQNKH
Trigger: ATGTTTGTTCTGGTAGAACCACAGAGACTCACACAA...CCAGAGCTGGGTAGAAGCTGCTTTTGTATTCAGTGTGAGGTGGTGTTTACAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR CAA 72 bp ATGATTAAATTCAAACGTGTGGATGTGGTTCATTCTTaGAGCTCAGAGGGGCCCCGATTTAGCTCTGTTGAG +
Preference number: 4 (lower is better)
Translates to: MIKFKRVDVVHS*SSEGPRFSSVE
Trigger: CTCAACAGAGCTAAATCGGGGCCCCTCTGAGCTCAAAGAATGAACCACATCCACACGTTTGAATTTAATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTGTATCCAGGAGGAGCTaGTGTTTGGAAACAAAGGCG +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSVSRRS*CLETKA
Trigger: CGCCTTTGTTTCCAAACATCAGCTCCTCCTGGATAC...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR TCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAGTATCCAGGAGGAGCTaGTGTTTGGAAACAAAGGCG +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRVSRRS*CLETKA
Trigger: CGCCTTTGTTTCCAAACATCAGCTCCTCCTGGATAC...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR TCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAAAGGACAAAGGAGATaGCCCAAGCCAGACCGATCA +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRKGQRR*PKPDRS
Trigger: TGATCGGTCTGGCTTGGGTCATCTCCTTTGTCCTTT...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR TCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTAAAGGACAAAGGAGATaGCCCAAGCCAGACCGATCA +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSKGQRR*PKPDRS
Trigger: TGATCGGTCTGGCTTGGGTCATCTCCTTTGTCCTTT...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR TCA 90 bp GACCTAGAGTCTTGGATTTGTTCCTTTTCTGCTATTATTAGCATCACAAAAGGACGCGCTTGTGAAAAATaGCCGACTGTCTCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: DLESWICSFSAIISITKGRACEK*PTVSAG
Trigger: ACCAGCAGAGACAGTCGGTCATTTTTCACAAGCGCG...TCCTTTTGTGATGCTAATAATAGCAGAAAAGGAACAAATCCAAGACTCTAGGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp GAGTGGTATTTGAAACCATACTACTCCGGGTTTGCCAACAAATTTCAAAGCTTCGTGAAGGTTACACAATaGACACCAGAAAGCACTGGC +
Preference number: 4 (lower is better)
Translates to: EWYLKPYYSGFANKFQSFVKVTQ*TPESTG
Trigger: GCCAGTGCTTTCTGGTGTTCATTGTGTAACCTTCAC...GAAGCTTTGAAATTTGTTGGCAAACCCGGAGTAGTATGGTTTCAAATACCACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp GTCATGGTAGCTGCTGACCTCAGTTTTGACCGATTTGGCATCAGAAGGCAAATTTTTCCCTGTGTAAAATaGTTTCAGACACAATGGTGG +
Preference number: 4 (lower is better)
Translates to: VMVAADLSFDRFGIRRQIFPCVK*FQTQWW
Trigger: CCACCATTGTGTCTGAAATCATTTTACACAGGGAAA...AATTTGCCTTCTGATGCCAAATCGGTCAAAACTGAGGTCAGCAGCTACCATGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp GAGTGGTATTTGAAACCATACTACTCCGGGTTTGCCAACAAATTTCAAAGCTTCAAGGATGGGAAGTGCTaGAGTACTGGGACACTTGAA +
Preference number: 4 (lower is better)
Translates to: EWYLKPYYSGFANKFQSFKDGKC*STGTLE
Trigger: TTCAAGTGTCCCAGTACTTCAGCACTTCCCATCCTT...GAAGCTTTGAAATTTGTTGGCAAACCCGGAGTAGTATGGTTTCAAATACCACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp AAAACCAAAGCAAACACCTGCTACCTAGAAACTCTATTTTGTGAGTTTGCCCGAAAGGATGGGAAGTGCTaGAGTACTGGGACACTTGAA +
Preference number: 4 (lower is better)
Translates to: KTKANTCYLETLFCEFARKDGKC*STGTLE
Trigger: TTCAAGTGTCCCAGTACTTCAGCACTTCCCATCCTT...TCGGGCAAACTCACAAAATAGAGTTTCTAGGTAGCAGGTGTTTGCTTTGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp GTCTGTAAACACCACCTCACACTGAATACAAAAGCAGCTTCTACCCAGCTCTGGATCTTAGGTAAGTGCTaGATATCTCCTGTAATGACA +
Preference number: 4 (lower is better)
Translates to: VCKHHLTLNTKAASTQLWILGKC*ISPVMT
Trigger: TGTCATTACAGGAGATATTCAGCACTTACCTAAGAT...CCAGAGCTGGGTAGAAGCTGCTTTTGTATTCAGTGTGAGGTGGTGTTTACAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp GACCTAGAGTCTTGGATTTGTTCCTTTTCTGCTATTATTAGCATCACAAAAGGATTCTCTCTCGATACATaGAGGGGCTTCCAGCGCTCT +
Preference number: 4 (lower is better)
Translates to: DLESWICSFSAIISITKGFSLDT*RGFQRS
Trigger: AGAGCGCTGGAAGCCCCTTCATGTATCGAGAGAGAA...TCCTTTTGTGATGCTAATAATAGCAGAAAAGGAACAAATCCAAGACTCTAGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp GTCATGGTAGCTGCTGACCTCAGTTTTGACCGATTTGGCATCAGAAGGCAAATTATATGTCCCCATCCTTaGATCATCTCTACTCAGATA +
Preference number: 4 (lower is better)
Translates to: VMVAADLSFDRFGIRRQIICPHP*IISTQI
Trigger: TATCTGAGTAGAGATGATTCAAGGATGGGGACATAT...AATTTGCCTTCTGATGCCAAATCGGTCAAAACTGAGGTCAGCAGCTACCATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp GCCACAGGAAAGCTCCAATATACTCTATTCATTGCTCAAGTGGACCTTAAAGAAGGTCAGAACTTTGTGTaGGTCTCTGTGGTTCTACCA +
Preference number: 4 (lower is better)
Translates to: ATGKLQYTLFIAQVDLKEGQNFV*VSVVLP
Trigger: TGGTAGAACCACAGAGACTCACACAAAGTTCTGACC...TTCTTTAAGGTCCACTTGAGCAATGAATAGAGTATATTGGAGCTTTCCTGTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCTGCCCATGTACTGGATaGGGAATGGCTAGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFCPCTG*GMARRE
Trigger: CTCCCTTCTAGCCATTCCTCATCCAGTACATGGGCA...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp GAGTGGTATTTGAAACCATACTACTCCGGGTTTGCCAACAAATTTCAAAGCTTCGTTGAAGTTCGTAACTaGTGCAGCTTCGAGAACTGC +
Preference number: 4 (lower is better)
Translates to: EWYLKPYYSGFANKFQSFVEVRN*CSFENC
Trigger: GCAGTTCTCGAAGCTGCAGCAGTTACGAACTTCAAC...GAAGCTTTGAAATTTGTTGGCAAACCCGGAGTAGTATGGTTTCAAATACCACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGATCCAACTGTCACTGCTaGTGTGGTCTTGGTCCATCT +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRSNCHC*CGLGPS
Trigger: AGATGGACCAAGACCACAGCAGCAGTGACAGTTGGA...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR GCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTTGTTCCAACTGTCACTaGTGCTGTGGTCTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSCSNCH*CCGLGP
Trigger: TGGACCAAGACCACAGCAGCAGTGACAGTTGGAACA...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR GCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGATGTTCCAACTGTCACTaGTGCTGTGGTCTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRCSNCH*CCGLGP
Trigger: TGGACCAAGACCACAGCAGCAGTGACAGTTGGAACA...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR GCA 90 bp GTCATGGTAGCTGCTGACCTCAGTTTTGACCGATTTGGCATCAGAAGGCAAATTGTTGCAGGAATAATTTaGCAGTTCAGTGTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: VMVAADLSFDRFGIRRQIVAGII*QFSVSH
Trigger: ATGGGAAACACTGAACTGGCAAATTATTCCTGCAAC...AATTTGCCTTCTGATGCCAAATCGGTCAAAACTGAGGTCAGCAGCTACCATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp TGCAGTGTTCCACTTGGGGTCTGGATTCCCACTTTTGGGATCCTTGGGAAGAATAATAATACTAACACTTaGTCATTTCTGAGCCGTACA +
Preference number: 4 (lower is better)
Translates to: CSVPLGVWIPTFGILGKNNNTNT*SFLSRT
Trigger: TGTACGGCTCAGAAATGAGCAAGTGTTAGTATTATT...ATTCTTCCCAAGGATCCCAAAAGTGGGAATCCAGACCCCAAGTGGAACACTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp GTCTGTAAACACCACCTCACACTGAATACAAAAGCAGCTTCTACCCAGCTCTGGGATCATGTGTTTGATTaGTTGCAGAACAGGATAAAG +
Preference number: 4 (lower is better)
Translates to: VCKHHLTLNTKAASTQLWDHVFD*LQNRIK
Trigger: CTTTATCCTGTTCTGCAAGCAATCAAACACATGATC...CCAGAGCTGGGTAGAAGCTGCTTTTGTATTCAGTGTGAGGTGGTGTTTACAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp AAAACCAAAGCAAACACCTGCTACCTAGAAACTCTATTTTGTGAGTTTGCCCGATGCCTACTGAGGAAGTaGTGGCCACGAGGTAATAAA +
Preference number: 4 (lower is better)
Translates to: KTKANTCYLETLFCEFARCLLRK*WPRGNK
Trigger: TTTATTACCTCGTGGCCAGCACTTCCTCAGTAGGCA...TCGGGCAAACTCACAAAATAGAGTTTCTAGGTAGCAGGTGTTTGCTTTGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTGAACTGCCCGTGGGGTaGACAAAGTTTTCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSELPVG*TKFSVS
Trigger: AGAGACAGAAAACTTTGTCCACCCCACGGGCAGTTC...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTTTCGAGAACTGCCCGTaGGGTGGACAAAGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSFENCP*GGQSFL
Trigger: CAGAAAACTTTGTCCACCCCACGGGCAGTTCTCGAA...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGATTCGAGAACTGCCCGTaGGGTGGACAAAGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRFENCP*GGQSFL
Trigger: CAGAAAACTTTGTCCACCCCACGGGCAGTTCTCGAA...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGACTGCAGTGTTCCACTTaGGGTCTGGATTCCCACTTT +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRLQCST*GLDSHF
Trigger: AAAGTGGGAATCCAGACCCCAAGTGGAACACTGCAG...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp GACCTAGAGTCTTGGATTTGTTCCTTTTCTGCTATTATTAGCATCACAAAAGGACCTGGCTGCTCTCTGTaGAAAACAGCCCTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: DLESWICSFSAIISITKGPGCSL*KTALVS
Trigger: TGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGG...TCCTTTTGTGATGCTAATAATAGCAGAAAAGGAACAAATCCAAGACTCTAGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCGCTTCTACCCAGCTCTaGGTTCACAACACGAATGCC +
Preference number: 4 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFASTQL*VHNTNA
Trigger: GGCATTCGTGTTGTGAACCCAGAGCTGGGTAGAAGC...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp GTCATGGTAGCTGCTGACCTCAGTTTTGACCGATTTGGCATCAGAAGGCAAATTTTGTGTGAGTCTCTGTaGTTCTACCAGAACAAACAT +
Preference number: 4 (lower is better)
Translates to: VMVAADLSFDRFGIRRQILCESL*FYQNKH
Trigger: ATGTTTGTTCTGGTAGAACCACAGAGACTCACACAA...AATTTGCCTTCTGATGCCAAATCGGTCAAAACTGAGGTCAGCAGCTACCATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp GTCTGTAAACACCACCTCACACTGAATACAAAAGCAGCTTCTACCCAGCTCTGGTTGCAGTGGAGAGTATaGCCCCTTTATCTTTTAAAT +
Preference number: 4 (lower is better)
Translates to: VCKHHLTLNTKAASTQLWLQWRV*PLYLLN
Trigger: ATTTAAAAGATAAAGGGGCCATACTCTCCACTGCAA...CCAGAGCTGGGTAGAAGCTGCTTTTGTATTCAGTGTGAGGTGGTGTTTACAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp GAGTGGTATTTGAAACCATACTACTCCGGGTTTGCCAACAAATTTCAAAGCTTCGCTTTGCCCAAACTGTaGCCATCACATAGCTCTAAG +
Preference number: 4 (lower is better)
Translates to: EWYLKPYYSGFANKFQSFALPKL*PSHSSK
Trigger: CTTAGAGCTATGTGATGGCCACAGTTTGGGCAAAGC...GAAGCTTTGAAATTTGTTGGCAAACCCGGAGTAGTATGGTTTCAAATACCACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAGAACACAAGTGCCTATaGAGCCTTTGCTTCCACTCC +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITREHKCL*SLCFHS
Trigger: GGAGTGGAAGCAAAGGCTCCATAGGCACTTGTGTTC...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676433.1
3UTR CAA 72 bp GTTACCATTCTAGAAACCTTTCTCAGGTCTGCAATGTaGACTCACACATTAATGCTGGGAGAGGCTGAAGAT +
Preference number: 4 (lower is better)
Translates to: VTILETFLRSAM*THTLMLGEAED
Trigger: ATCTTCAGCCTCTCCCAGCATTAATGTGTGAGTCAACATTGCAGACCTGAGAAAGGTTTCTAGAATGGTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR CAA 72 bp CCTTTGCTTACAAAGCAAATATACACCCATCTGTTTTaGGACTGCGGTTTCTCTATCCACCAGAGAGCATCT +
Preference number: 4 (lower is better)
Translates to: PLLTKQIYTHLF*DCGFSIHQRAS
Trigger: AGATGCTCTCTGGTGGATAGAGAAACCGCAGTCCAAAAACAGATGGGTGTATATTTGCTTTGTAAGCAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCGTATCCAGGAGGAGCTaGTGTTTGGAAACAAAGGCG +
Preference number: 4 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFVSRRS*CLETKA
Trigger: CGCCTTTGTTTCCAAACATCAGCTCCTCCTGGATAC...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGATTCCGCTTAGTGATCTaGCTTCTGGTCTTCAGAGCA +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRFRLVI*LLVFRA
Trigger: TGCTCTGAAGACCAGAAGTCAGATCACTAAGCGGAA...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR TCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTTTCCGCTTAGTGATCTaGCTTCTGGTCTTCAGAGCA +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSFRLVI*LLVFRA
Trigger: TGCTCTGAAGACCAGAAGTCAGATCACTAAGCGGAA...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR TCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGATGTTCACCAGAACCATaGTGTTGTATGGGGTCCAAG +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRCSPEP*CCMGSK
Trigger: CTTGGACCCCATACAACATCATGGTTCTGGTGAACA...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR TCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTTGTTCACCAGAACCATaGTGTTGTATGGGGTCCAAG +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSCSPEP*CCMGSK
Trigger: CTTGGACCCCATACAACATCATGGTTCTGGTGAACA...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR TCA 90 bp GCCACAGGAAAGCTCCAATATACTCTATTCATTGCTCAAGTGGACCTTAAAGAATCACCTATTCCTGGGTaGAGGTTACACAATGAACAC +
Preference number: 4 (lower is better)
Translates to: ATGKLQYTLFIAQVDLKESPIPG*RLHNEH
Trigger: GTGTTCATTGTGTAACCTTCACCCAGGAATAGGTGA...TTCTTTAAGGTCCACTTGAGCAATGAATAGAGTATATTGGAGCTTTCCTGTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp GCCACAGGAAAGCTCCAATATACTCTATTCATTGCTCAAGTGGACCTTAAAGAAAAAGGACACCATGGCTaGCGACTGAAGAGTCATATT +
Preference number: 4 (lower is better)
Translates to: ATGKLQYTLFIAQVDLKEKGHHG*RLKSHI
Trigger: AATATGACTCTTCAGTCGTCAGCCATGGTGTCCTTT...TTCTTTAAGGTCCACTTGAGCAATGAATAGAGTATATTGGAGCTTTCCTGTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCGAGTTAGGTGCTTGGTaGTGCCAACAGGATGACATG +
Preference number: 4 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFELGAW*CQQDDM
Trigger: CATGTCATCCTGTTGGCATCACCAAGCACCTAACTC...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCCGCCCAGAGGAAGTTTaGAGTGTTACATGTAGGAGG +
Preference number: 4 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFRPEEV*SVTCRR
Trigger: CCTCCTACATGTAACACTTCAAACTTCCTCTGGGCG...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp GACCTAGAGTCTTGGATTTGTTCCTTTTCTGCTATTATTAGCATCACAAAAGGAGAGAAATCAGCATGCTaGTTCACCATCGTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: DLESWICSFSAIISITKGEKSAC*FTIVEA
Trigger: GGCTTCCACGATGGTGAATCAGCATGCTGATTTCTC...TCCTTTTGTGATGCTAATAATAGCAGAAAAGGAACAAATCCAAGACTCTAGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTTGCAGTTTGCTGCTCTaGAGTTACTTGTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSCSLLL*SYLFCS
Trigger: GGAGCAGAACAAGTAACTTCAGAGCAGCAAACTGCA...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676433.1
CDS-3UTR GCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTCTGGAGAGGAGAAATTaGCAGCTGCTCGAGAAACAT +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSLERRN*QLLEKH
Trigger: ATGTTTCTCGAGCAGCTGGCAATTTCTCCTCTCCAG...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR GCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGACTGGAGAGGAGAAATTaGCAGCTGCTCGAGAAACAT +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRLERRN*QLLEKH
Trigger: ATGTTTCTCGAGCAGCTGGCAATTTCTCCTCTCCAG...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR GCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAAAGTTTTCTGTCTCTaGCTCTGTCCCAGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRKVFCL*LCPRGL
Trigger: CAAGCCTCTGGGACAGAGGCAGAGACAGAAAACTTT...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR GCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTGTTGAAGTTCGTAACTaGTGCAGCTTCGAGAACTGC +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSVEVRN*CSFENC
Trigger: GCAGTTCTCGAAGCTGCAGCAGTTACGAACTTCAAC...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR GCA 90 bp GACCTAGAGTCTTGGATTTGTTCCTTTTCTGCTATTATTAGCATCACAAAAGGATCCAACTGTCACTGCTaGTGTGGTCTTGGTCCATCT +
Preference number: 4 (lower is better)
Translates to: DLESWICSFSAIISITKGSNCHC*CGLGPS
Trigger: AGATGGACCAAGACCACAGCAGCAGTGACAGTTGGA...TCCTTTTGTGATGCTAATAATAGCAGAAAAGGAACAAATCCAAGACTCTAGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGCTTTTTGGAAAACTaGCTCCATCGTCCACGCTCT +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRSFLEN*LHRPRS
Trigger: AGAGCGTGGACGATGGAGGCAGTTTTCCAAAAAGCT...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR GCA 90 bp GAGTGGTATTTGAAACCATACTACTCCGGGTTTGCCAACAAATTTCAAAGCTTCGAACTGGGTCAGCTATaGTCATCTGAGATTCCAAAG +
Preference number: 4 (lower is better)
Translates to: EWYLKPYYSGFANKFQSFELGQL*SSEIPK
Trigger: CTTTGGAATCTCAGATGAGCATAGCTGACCCAGTTC...GAAGCTTTGAAATTTGTTGGCAAACCCGGAGTAGTATGGTTTCAAATACCACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp GACCTAGAGTCTTGGATTTGTTCCTTTTCTGCTATTATTAGCATCACAAAAGGATGCATCAGAGCTCTGTaGTCCAGCTTCTCTCTCGAT +
Preference number: 4 (lower is better)
Translates to: DLESWICSFSAIISITKGCIRAL*SSFSLD
Trigger: ATCGAGAGAGAAGCTGGAGCACAGAGCTCTGATGCA...TCCTTTTGTGATGCTAATAATAGCAGAAAAGGAACAAATCCAAGACTCTAGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp GACCTAGAGTCTTGGATTTGTTCCTTTTCTGCTATTATTAGCATCACAAAAGGATCCCTGAGAGCTTCCTaGCAAGAGAAATCAGCATGC +
Preference number: 4 (lower is better)
Translates to: DLESWICSFSAIISITKGSLRAS*QEKSAC
Trigger: GCATGCTGATTTCTCTTGGCAGGAAGCTCTCAGGGA...TCCTTTTGTGATGCTAATAATAGCAGAAAAGGAACAAATCCAAGACTCTAGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAGGAGGAGCTGATGTTTaGAAACAAAGGCGAGGTTGT +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRGGADV*KQRRGC
Trigger: ACAACCTCGCCTTTGTTTCCAAACATCAGCTCCTCC...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTGGAGGAGCTGATGTTTaGAAACAAAGGCGAGGTTGT +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSGGADV*KQRRGC
Trigger: ACAACCTCGCCTTTGTTTCCAAACATCAGCTCCTCC...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CCA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCTTCGAGAACTGCCCGTaGGGTGGACAAAGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFFENCP*GGQSFL
Trigger: CAGAAAACTTTGTCCACCCCACGGGCAGTTCTCGAA...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp AAAACCAAAGCAAACACCTGCTACCTAGAAACTCTATTTTGTGAGTTTGCCCGACATACTTCCTCCTGTTaGAGCGTTTCATGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: KTKANTCYLETLFCEFARHTSSC*SVSCFA
Trigger: AGCAAAGCATGAAACGCTCCAACAGGAGGAAGTATG...TCGGGCAAACTCACAAAATAGAGTTTCTAGGTAGCAGGTGTTTGCTTTGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp GAGTGGTATTTGAAACCATACTACTCCGGGTTTGCCAACAAATTTCAAAGCTTCCATACTTCCTCCTGTTaGAGCGTTTCATGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: EWYLKPYYSGFANKFQSFHTSSC*SVSCFA
Trigger: AGCAAAGCATGAAACGCTCCAACAGGAGGAAGTATG...GAAGCTTTGAAATTTGTTGGCAAACCCGGAGTAGTATGGTTTCAAATACCACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTCTGACTCTAGCTGGATaGGAAGCTTGGAGAAGCTTT +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSLTLAG*EAWRSF
Trigger: AAAGCTTCTCCAAGCTTCCCATCCAGCTAGAGTCAG...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTGAAGAATGTGGGAACTaGGTCAGCTATGCTCATCTG +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSEECGN*VSYAHL
Trigger: CAGATGAGCATAGCTGACCCAGTTCCCACATTCTTC...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp GAGTGGTATTTGAAACCATACTACTCCGGGTTTGCCAACAAATTTCAAAGCTTCCTGGATTCCCACTTTTaGGATCCTTGGGAAGAATGT +
Preference number: 4 (lower is better)
Translates to: EWYLKPYYSGFANKFQSFLDSHF*DPWEEC
Trigger: ACATTCTTCCCAAGGATCCCAAAAGTGGGAATCCAG...GAAGCTTTGAAATTTGTTGGCAAACCCGGAGTAGTATGGTTTCAAATACCACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp GACCTAGAGTCTTGGATTTGTTCCTTTTCTGCTATTATTAGCATCACAAAAGGAGTTCCACTTGGGGTCTaGATTCCCACTTTTGGGATC +
Preference number: 4 (lower is better)
Translates to: DLESWICSFSAIISITKGVPLGV*IPTFGI
Trigger: GATCCCAAAAGTGGGAATCCAGACCCCAAGTGGAAC...TCCTTTTGTGATGCTAATAATAGCAGAAAAGGAACAAATCCAAGACTCTAGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp GCCACAGGAAAGCTCCAATATACTCTATTCATTGCTCAAGTGGACCTTAAAGAATTTGAAAGGACACCATaGCTGACGACTGAAGAGTCA +
Preference number: 4 (lower is better)
Translates to: ATGKLQYTLFIAQVDLKEFERTP*LTTEES
Trigger: TGACTCTTCAGTCGTCAGCCATGGTGTCCTTTCAAA...TTCTTTAAGGTCCACTTGAGCAATGAATAGAGTATATTGGAGCTTTCCTGTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAAGAAACAGCCCTTTTaGGAGGGAGGCAAGATAGGA +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRKKQPF*EGGKIG
Trigger: TCCTATCTTGCCTCCCTCCCAAAAGGGCTGTTTCTT...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTCTTCTCCTAACCATCTaGCAATGCCTGGAGAATGGA +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSLLLTI*QCLENG
Trigger: TCCATTCTCCAGGCATTGCCAGATGGTTAGGAGAAG...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR CAA 72 bp GGCATCAGAAGGCAAATTAGAGAAGCTTCGGTGTTGTaGCTTAGTTTGAGCAATGAGGATAAAACCCAGAAA +
Preference number: 4 (lower is better)
Translates to: GIRRQIREASVL*LSLSNEDKTQK
Trigger: TTTCTGGGTTTTATCCTCATTGCTCAAACTAAGCAACAACACCGAAGCTTCTCTAATTTGCCTTCTGATGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR CAA 72 bp TTTGGCATCAGAAGGCAAATTAGAGAAGCTTCGGTGTaGTTGCTTAGTTTGAGCAATGAGGATAAAACCCAG +
Preference number: 4 (lower is better)
Translates to: FGIRRQIREASV*LLSLSNEDKTQ
Trigger: CTGGGTTTTATCCTCATTGCTCAAACTAAGCAACAACACCGAAGCTTCTCTAATTTGCCTTCTGATGCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp AAAACCAAAGCAAACACCTGCTACCTAGAAACTCTATTTTGTGAGTTTGCCCGAGTCATTGTGACTCTCTaGCATAGTAATCTACCAGGA +
Preference number: 4 (lower is better)
Translates to: KTKANTCYLETLFCEFARVIVTL*HSNLPG
Trigger: TCCTGGTAGATTACTATGTCAGAGAGTCACAATGAC...TCGGGCAAACTCACAAAATAGAGTTTCTAGGTAGCAGGTGTTTGCTTTGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCCTAAGGTCTGTGGGTTaGTGTGTGCGTTTTGTCACT +
Preference number: 4 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFLRSVG*CVRFVT
Trigger: AGTGACAAAACGCACACATCAACCCACAGACCTTAG...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp GAGTGGTATTTGAAACCATACTACTCCGGGTTTGCCAACAAATTTCAAAGCTTCATACACAGACACCACTaGGTACACTTCTACTGTTGT +
Preference number: 4 (lower is better)
Translates to: EWYLKPYYSGFANKFQSFIHRHH*VHFYCC
Trigger: ACAACAGTAGAAGTGTACTCAGTGGTGTCTGTGTAT...GAAGCTTTGAAATTTGTTGGCAAACCCGGAGTAGTATGGTTTCAAATACCACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp GCCACAGGAAAGCTCCAATATACTCTATTCATTGCTCAAGTGGACCTTAAAGAAACCATGGCTGACGACTaGAGAGTCATATTTATCAAC +
Preference number: 4 (lower is better)
Translates to: ATGKLQYTLFIAQVDLKETMADD*RVIFIN
Trigger: GTTGATAAATATGACTCTTCAGTCGTCAGCCATGGT...TTCTTTAAGGTCCACTTGAGCAATGAATAGAGTATATTGGAGCTTTCCTGTGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGAAAACTATGTTTATaGACTCTCCAGGCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRRKLCL*TLQALQ
Trigger: CTGGAGGGCCTGGAGAGTTCATAAACATAGTTTTCT...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp AAAACCAAAGCAAACACCTGCTACCTAGAAACTCTATTTTGTGAGTTTGCCCGACCACAGTCCTCTGAGTaGCTCATAACCAAAATATGT +
Preference number: 4 (lower is better)
Translates to: KTKANTCYLETLFCEFARPQSSE*LITKIC
Trigger: ACATATTTTGGTTATGAGTCACTCAGAGGACTGTGG...TCGGGCAAACTCACAAAATAGAGTTTCTAGGTAGCAGGTGTTTGCTTTGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676153.1
CDS-3UTR TCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGATGGTTCTGTACATCATaGTGGGGATGGATACAGTTC +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRWFCTS*WGWIQF
Trigger: GAACTGTATCCATCCCCATCATGATGTACAGAACCA...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
CDS-3UTR TCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTTGGTTCTGTACATCATaGTGGGGATGGATACAGTTC +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSWFCTS*WGWIQF
Trigger: GAACTGTATCCATCCCCATCATGATGTACAGAACCA...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
CDS-3UTR TCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTCTGGGATGCCGACTATaGATTCTGCTTCATTATGTG +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSLGCRL*ILLHYV
Trigger: CACATAATGAAGCAGAATTCATAGTCGGCATCCCAG...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676433.1
CDS-3UTR GCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTGGAGAAATTGCCAGCTaGTCGAGAAACATTGTAGCT +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSGEIAS*SRNIVA
Trigger: AGCTACAATGTTTCTCGAGCAGCTGGCAATTTCTCC...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR GCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAGGAGAAATTGCCAGCTaGTCGAGAAACATTGTAGCT +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRGEIAS*SRNIVA
Trigger: AGCTACAATGTTTCTCGAGCAGCTGGCAATTTCTCC...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR GCA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCCTGGAGAGGAGAAATTaGCAGCTGCTCGAGAAACAT +
Preference number: 4 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFLERRN*QLLEKH
Trigger: ATGTTTCTCGAGCAGCTGGCAATTTCTCCTCTCCAG...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp GAGTGGTATTTGAAACCATACTACTCCGGGTTTGCCAACAAATTTCAAAGCTTCTTGACCGTCTTCAGCTaGTTGTTGACCTTAAATGAC +
Preference number: 4 (lower is better)
Translates to: EWYLKPYYSGFANKFQSFLTVFS*LLTLND
Trigger: GTCATTTAAGGTCAACAAGCAGCTGAAGACGGTCAA...GAAGCTTTGAAATTTGTTGGCAAACCCGGAGTAGTATGGTTTCAAATACCACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp GACCTAGAGTCTTGGATTTGTTCCTTTTCTGCTATTATTAGCATCACAAAAGGAAAAGTTTTCTGTCTCTaGCTCTGTCCCAGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: DLESWICSFSAIISITKGKVFCL*LCPRGL
Trigger: CAAGCCTCTGGGACAGAGGCAGAGACAGAAAACTTT...TCCTTTTGTGATGCTAATAATAGCAGAAAAGGAACAAATCCAAGACTCTAGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCAAAGTTTTCTGTCTCTaGCTCTGTCCCAGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFKVFCL*LCPRGL
Trigger: CAAGCCTCTGGGACAGAGGCAGAGACAGAAAACTTT...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCGTTGAAGTTCGTAACTaGTGCAGCTTCGAGAACTGC +
Preference number: 4 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFVEVRN*CSFENC
Trigger: GCAGTTCTCGAAGCTGCAGCAGTTACGAACTTCAAC...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGACTGTGGGTTGATGTGTaGGTTTTGTCACTGCTATTG +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRLWVDV*VLSLLL
Trigger: CAATAGCAGTGACAAAACGCACACATCAACCCACAG...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR GCA 90 bp GTCATGGTAGCTGCTGACCTCAGTTTTGACCGATTTGGCATCAGAAGGCAAATTAATAATACTAACACTTaGTCATTTCTGAGCCGTACA +
Preference number: 4 (lower is better)
Translates to: VMVAADLSFDRFGIRRQINNTNT*SFLSRT
Trigger: TGTACGGCTCAGAAATGAGCAAGTGTTAGTATTATT...AATTTGCCTTCTGATGCCAAATCGGTCAAAACTGAGGTCAGCAGCTACCATGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTCATCTGTTTTTGGACTaGGGTTTCTCTATCCACCAG +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSHLFLD*GFSIHQ
Trigger: CTGGTGGATAGAGAAACCGCAGTCCAAAAACAGATG...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGACATACTTCCTCCTGTTaGAGCGTTTCATGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRHTSSC*SVSCFA
Trigger: AGCAAAGCATGAAACGCTCCAACAGGAGGAAGTATG...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTCATACTTCCTCCTGTTaGAGCGTTTCATGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSHTSSC*SVSCFA
Trigger: AGCAAAGCATGAAACGCTCCAACAGGAGGAAGTATG...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAGCTGGATGGGAAGCTTaGAGAAGCTTTTTGGAAAAC +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRAGWEA*RSFLEN
Trigger: GTTTTCCAAAAAGCTTCTCCAAGCTTCCCATCCAGC...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTGCTGGATGGGAAGCTTaGAGAAGCTTTTTGGAAAAC +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSAGWEA*RSFLEN
Trigger: GTTTTCCAAAAAGCTTCTCCAAGCTTCCCATCCAGC...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CCA 90 bp GACCTAGAGTCTTGGATTTGTTCCTTTTCTGCTATTATTAGCATCACAAAAGGACCATCTGGCAATGCCTaGAGAATGGAGATTGAGTGT +
Preference number: 4 (lower is better)
Translates to: DLESWICSFSAIISITKGPSGNA*RMEIEC
Trigger: ACACTCAATCTCCATTCTCCAGGCATTGCCAGATGG...TCCTTTTGTGATGCTAATAATAGCAGAAAAGGAACAAATCCAAGACTCTAGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCCTTCTCCTAACCATCTaGCAATGCCTGGAGAATGGA +
Preference number: 4 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFLLLTI*QCLENG
Trigger: TCCATTCTCCAGGCATTGCCAGATGGTTAGGAGAAG...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp GTCATGGTAGCTGCTGACCTCAGTTTTGACCGATTTGGCATCAGAAGGCAAATTAGTTCTAAAGAACATTaGGTTACCATTCTAGAAACC +
Preference number: 4 (lower is better)
Translates to: VMVAADLSFDRFGIRRQISSKEH*VTILET
Trigger: GGTTTCTAGAATGGTAACCCAATGTTCTTTAGAACT...AATTTGCCTTCTGATGCCAAATCGGTCAAAACTGAGGTCAGCAGCTACCATGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTTTACATGTAGGAGGCTaGAAATGCCCATGTACTGGA +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSLHVGG*KCPCTG
Trigger: TCCAGTACATGGGCATTTCCAGCCTCCTACATGTAA...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp GACCTAGAGTCTTGGATTTGTTCCTTTTCTGCTATTATTAGCATCACAAAAGGAGCTTTGCCCAAACTGTaGCCATCACATAGCTCTAAG +
Preference number: 4 (lower is better)
Translates to: DLESWICSFSAIISITKGALPKL*PSHSSK
Trigger: CTTAGAGCTATGTGATGGCCACAGTTTGGGCAAAGC...TCCTTTTGTGATGCTAATAATAGCAGAAAAGGAACAAATCCAAGACTCTAGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTACACCCATCTGTTTTTaGACTGCGGTTTCTCTATCC +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSTPICF*TAVSLS
Trigger: GGATAGAGAAACCGCAGTCCAAAAACAGATGGGTGT...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAACACCCATCTGTTTTTaGACTGCGGTTTCTCTATCC +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRTPICF*TAVSLS
Trigger: GGATAGAGAAACCGCAGTCCAAAAACAGATGGGTGT...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTGTCATTGTGACTCTCTaGCATAGTAATCTACCAGGA +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSVIVTL*HSNLPG
Trigger: TCCTGGTAGATTACTATGTCAGAGAGTCACAATGAC...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR TCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGATGTGCAAGGTCATTGTaGCTCTCTGACATAGTAATC +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRCARSL*LSDIVI
Trigger: GATTACTATGTCAGAGAGTCACAATGACCTTGCACA...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR TCA 90 bp GACCTAGAGTCTTGGATTTGTTCCTTTTCTGCTATTATTAGCATCACAAAAGGATCAGCTATGCTCATCTaGGATTCCAAAGCTAATGGG +
Preference number: 4 (lower is better)
Translates to: DLESWICSFSAIISITKGSAMLI*DSKANG
Trigger: CCCATTAGCTTTGGAATCTCAGATGAGCATAGCTGA...TCCTTTTGTGATGCTAATAATAGCAGAAAAGGAACAAATCCAAGACTCTAGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp GACCTAGAGTCTTGGATTTGTTCCTTTTCTGCTATTATTAGCATCACAAAAGGAAGAAACTCTATTTTGTaGGTTTGCCCGACCTCAGGT +
Preference number: 4 (lower is better)
Translates to: DLESWICSFSAIISITKGRNSIL*VCPTSG
Trigger: ACCTGAGGTCGGGCAAACTCACAAAATAGAGTTTCT...TCCTTTTGTGATGCTAATAATAGCAGAAAAGGAACAAATCCAAGACTCTAGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp GCCACAGGAAAGCTCCAATATACTCTATTCATTGCTCAAGTGGACCTTAAAGAATTTATTTTCTTATCATaGGCCTCCCTTCCCAGACAT +
Preference number: 4 (lower is better)
Translates to: ATGKLQYTLFIAQVDLKEFIFLS*ASLPRH
Trigger: ATGTCTGGGAAGGGAGGCTCATGATAAGAAAATAAA...TTCTTTAAGGTCCACTTGAGCAATGAATAGAGTATATTGGAGCTTTCCTGTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp GAGTGGTATTTGAAACCATACTACTCCGGGTTTGCCAACAAATTTCAAAGCTTCTTTATTTTCTTATCATaGGCCTCCCTTCCCAGACAT +
Preference number: 4 (lower is better)
Translates to: EWYLKPYYSGFANKFQSFFIFLS*ASLPRH
Trigger: ATGTCTGGGAAGGGAGGCTCATGATAAGAAAATAAA...GAAGCTTTGAAATTTGTTGGCAAACCCGGAGTAGTATGGTTTCAAATACCACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp AAAACCAAAGCAAACACCTGCTACCTAGAAACTCTATTTTGTGAGTTTGCCCGATTTGAGTTTTGTATGTaGACTGCAGAACTGCTAAGC +
Preference number: 4 (lower is better)
Translates to: KTKANTCYLETLFCEFARFEFCM*TAELLS
Trigger: GCTTAGCAGTTCTGCAGTTCACATACAAAACTCAAA...TCGGGCAAACTCACAAAATAGAGTTTCTAGGTAGCAGGTGTTTGCTTTGGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCAGAAAACTATGTTTATaGACTCTCCAGGCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFRKLCL*TLQALQ
Trigger: CTGGAGGGCCTGGAGAGTTCATAAACATAGTTTTCT...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp GACCTAGAGTCTTGGATTTGTTCCTTTTCTGCTATTATTAGCATCACAAAAGGAGGGAGATCATGTGTTTaGTTGCTTGCAGAACAGGAT +
Preference number: 4 (lower is better)
Translates to: DLESWICSFSAIISITKGGRSCV*LLAEQD
Trigger: ATCCTGTTCTGCAAGCAATCAAACACATGATCTCCC...TCCTTTTGTGATGCTAATAATAGCAGAAAAGGAACAAATCCAAGACTCTAGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGACCACAGTCCTCTGAGTaGCTCATAACCAAAATATGT +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRPQSSE*LITKIC
Trigger: ACATATTTTGGTTATGAGTCACTCAGAGGACTGTGG...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
CDS-3UTR TCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTCCACAGTCCTCTGAGTaGCTCATAACCAAAATATGT +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSPQSSE*LITKIC
Trigger: ACATATTTTGGTTATGAGTCACTCAGAGGACTGTGG...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
CDS-3UTR TCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTCAATCCACAGTCCTCTaGGTGACTCATAACCAAAAT +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSQSTVL*VTHNQN
Trigger: ATTTTGGTTATGAGTCACTCAGAGGACTGTGGATTG...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
CDS-3UTR TCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGACAATCCACAGTCCTCTaGGTGACTCATAACCAAAAT +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRQSTVL*VTHNQN
Trigger: ATTTTGGTTATGAGTCACTCAGAGGACTGTGGATTG...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
CDS-3UTR GCA 90 bp GAGTGGTATTTGAAACCATACTACTCCGGGTTTGCCAACAAATTTCAAAGCTTCGTTGTACTGTTATTGTaGAAGGTCATTGTGACTCTC +
Preference number: 4 (lower is better)
Translates to: EWYLKPYYSGFANKFQSFVVLLL*KVIVTL
Trigger: GAGAGTCACAATGACCTTGCACAATAACAGTACAAC...GAAGCTTTGAAATTTGTTGGCAAACCCGGAGTAGTATGGTTTCAAATACCACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGATTGACCGTCTTCAGCTaGTTGTTGACCTTAAATGAC +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRLTVFS*LLTLND
Trigger: GTCATTTAAGGTCAACAAGCAGCTGAAGACGGTCAA...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR GCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGATGTTGGAGCGTTTCATaGTTTGCTGTTGAAGTTCGT +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRCWSVS*FAVEVR
Trigger: ACGAACTTCAACAGCAAAGCATGAAACGCTCCAACA...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR GCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTTGTTGGAGCGTTTCATaGTTTGCTGTTGAAGTTCGT +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSCWSVS*FAVEVR
Trigger: ACGAACTTCAACAGCAAAGCATGAAACGCTCCAACA...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CCA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCGCTGGATGGGAAGCTTaGAGAAGCTTTTTGGAAAAC +
Preference number: 4 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFAGWEA*RSFLEN
Trigger: GTTTTCCAAAAAGCTTCTCCAAGCTTCCCATCCAGC...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAACACCAGAAAGCACTaGCCACAGCTGATTAACAAA +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRNTRKH*PQLINK
Trigger: TTTGTTAATCAGCTGTGGCCAGTGCTTTCTGGTGTT...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAATGCTTCTTTGCAGTaGAGAGTATGGCCCCTTTAT +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRNASLQ*RVWPLY
Trigger: ATAAAGGGGCCATACTCTCCACTGCAAAGAAGCATT...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTTTTTGTCTGTGTGTCTaGGATGCCGACTATGAATTC +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSFCLCV*DADYEF
Trigger: GAATTCATAGTCGGCATCCCAGACACACAGACAAAA...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000676433.1
CDS-3UTR TCA 90 bp AAAACCAAAGCAAACACCTGCTACCTAGAAACTCTATTTTGTGAGTTTGCCCGACTTGTTGACCTTAAATaGCACAATTACCAGGATGTT +
Preference number: 4 (lower is better)
Translates to: KTKANTCYLETLFCEFARLVDLK*HNYQDV
Trigger: AACATCCTGGTAATTGTGTCATTTAAGGTCAACAAG...TCGGGCAAACTCACAAAATAGAGTTTCTAGGTAGCAGGTGTTTGCTTTGGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGACGTAAACAGATTCATTaGAATGACCCCGATAATCAG +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRRKQIH*NDPDNQ
Trigger: CTGATTATCGGGGTCATTTCAATGAATCTGTTTACG...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR TCA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCAAGCCCTATTTTCTTTaGGAAGGTGCCATTCAGCAA +
Preference number: 4 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFKPYFL*EGAIQQ
Trigger: TTGCTGAATGGCACCTTCTCAAAGAAAATAGGGCTT...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGACACAGGTGGATAATATaGCATTCTGTAGTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRHRWII*HSVVCC
Trigger: ACAGCAAACTACAGAATGTCATATTATCCACCTGTG...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGATTTGAGTTTTGTATGTaGACTGCAGAACTGCTAAGC +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRFEFCM*TAELLS
Trigger: GCTTAGCAGTTCTGCAGTTCACATACAAAACTCAAA...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCCAATCCACAGTCCTCTaGGTGACTCATAACCAAAAT +
Preference number: 4 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFQSTVL*VTHNQN
Trigger: ATTTTGGTTATGAGTCACTCAGAGGACTGTGGATTG...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676153.1
CDS-3UTR TCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTTCATTATGTGGTACTTaGGATTGGGACAGGTTTCAA +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSSLCGT*DWDRFQ
Trigger: TTGAAACCTGTCCCAATCTCAAGTACCACATAATGA...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676433.1
CDS-3UTR GCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTGTTGTACTGTTATTGTaGAAGGTCATTGTGACTCTC +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSVVLLL*KVIVTL
Trigger: GAGAGTCACAATGACCTTGCACAATAACAGTACAAC...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR GCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAGTTGTACTGTTATTGTaGAAGGTCATTGTGACTCTC +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRVVLLL*KVIVTL
Trigger: GAGAGTCACAATGACCTTGCACAATAACAGTACAAC...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR GCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTTTTCCAACAAAGTATTaGCAGAACAAGATGGCAGGA +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSFPTKY*QNKMAG
Trigger: TCCTGCCATCTTGTTCTGGCAATACTTTGTTGGAAA...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR GCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGATTTCCAACAAAGTATTaGCAGAACAAGATGGCAGGA +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRFPTKY*QNKMAG
Trigger: TCCTGCCATCTTGTTCTGGCAATACTTTGTTGGAAA...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR GCA 90 bp GAGTGGTATTTGAAACCATACTACTCCGGGTTTGCCAACAAATTTCAAAGCTTCGTACGAAACTTGAACTaGACAAAACAGTACTTTGCA +
Preference number: 4 (lower is better)
Translates to: EWYLKPYYSGFANKFQSFVRNLN*TKQYFA
Trigger: TGCAAAGTACTGTTTTGTGCAGTTCAAGTTTCGTAC...GAAGCTTTGAAATTTGTTGGCAAACCCGGAGTAGTATGGTTTCAAATACCACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp GAGTGGTATTTGAAACCATACTACTCCGGGTTTGCCAACAAATTTCAAAGCTTCATACTACTCCGGGTTTaGCAACAAATTTCAAAGCTT +
Preference number: 4 (lower is better)
Translates to: EWYLKPYYSGFANKFQSFILLRV*QQISKL
Trigger: AAGCTTTGAAATTTGTTGGCAAACCCGGAGTAGTAT...GAAGCTTTGAAATTTGTTGGCAAACCCGGAGTAGTATGGTTTCAAATACCACTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCGGACACTGTTTTAGATaGGAGTATGATACATGCCCT +
Preference number: 4 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFGHCFR*EYDTCP
Trigger: AGGGCATGTATCATACTCGCATCTAAAACAGTGTCC...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAGCCGACTATGAATTCTaGTTCATTATGTGGTACTTG +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRADYEF*FIMWYL
Trigger: CAAGTACCACATAATGAAGCAGAATTCATAGTCGGC...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676433.1
CDS-3UTR CCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTGATTCCAAAAGGTTTTaGGTATGCAGCTGTCACAAA +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSDSKRF*VCSCHK
Trigger: TTTGTGACAGCTGCATACCCAAAACCTTTTGGAATC...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAGATTCCAAAAGGTTTTaGGTATGCAGCTGTCACAAA +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRDSKRF*VCSCHK
Trigger: TTTGTGACAGCTGCATACCCAAAACCTTTTGGAATC...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CCA 90 bp AAAACCAAAGCAAACACCTGCTACCTAGAAACTCTATTTTGTGAGTTTGCCCGATGTTGCACGTGGTATTaGAGCAAAATATTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: KTKANTCYLETLFCEFARCCTWY*SKIFFQ
Trigger: CTGAAAGAATATTTTGCTCCAATACCACGTGCAACA...TCGGGCAAACTCACAAAATAGAGTTTCTAGGTAGCAGGTGTTTGCTTTGGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTTTCTGCTTCATTATGTaGTACTTGAGATTGGGACAG +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSFCFIM*YLRLGQ
Trigger: CTGTCCCAATCTCAAGTACCACATAATGAAGCAGAA...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676433.1
3UTR CAA 72 bp CAGAACAAACATAGGCCTGATATTCTAGCAACGCATTaGGATGACTTCCATATATCCAAATACACTATCCGT +
Preference number: 4 (lower is better)
Translates to: QNKHRPDILATH*DDFHISKYTIR
Trigger: ACGGATAGTGTATTTGGATATATGGAAGTCATCCAAATGCGTTGCTAGAATATCAGGCCTATGTTTGTTCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR CAA 72 bp GGACACTGTTTTAGATGCGAGTATGATACATGCCCTTaGCTTACAAAGCAAATATACACCCATCTGTTTTTG +
Preference number: 4 (lower is better)
Translates to: GHCFRCEYDTCP*LTKQIYTHLFL
Trigger: CAAAAACAGATGGGTGTATATTTGCTTTGTAAGCAAAGGGCATGTATCATACTCGCATCTAAAACAGTGTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGACTTGTTGACCTTAAATaGCACAATTACCAGGATGTT +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRLVDLK*HNYQDV
Trigger: AACATCCTGGTAATTGTGTCATTTAAGGTCAACAAG...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR TCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTCTTGTTGACCTTAAATaGCACAATTACCAGGATGTT +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSLVDLK*HNYQDV
Trigger: AACATCCTGGTAATTGTGTCATTTAAGGTCAACAAG...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR TCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAATTCCCAATTTGGGATaGAGACATTTTGATCTTAGG +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRIPNLG*RHFDLR
Trigger: CCTAAGATCAAAATGTCTTCATCCCAAATTGGGAAT...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGACTCATGCATATGGCATaGAATAATTCGATTCCCAAT +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRLMHMA*NNSIPN
Trigger: ATTGGGAATCGAATTATTTCATGCCATATGCATGAG...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCTTTCCAACAAAGTATTaGCAGAACAAGATGGCAGGA +
Preference number: 4 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFFPTKY*QNKMAG
Trigger: TCCTGCCATCTTGTTCTGGCAATACTTTGTTGGAAA...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCCACTATGTGTGTGCGTaGAGAACTCACACATATATA +
Preference number: 4 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFHYVCA*RTHTYI
Trigger: TATATATGTGTGAGTTCTGCACGCACACACATAGTG...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTTCACATATTGCAGTTTaGTGCTCTGAAGTTACTTGT +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSSHIAV*CSEVTC
Trigger: ACAAGTAACTTCAGAGCAGCAAACTGCAATATGTGA...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676433.1
CDS-3UTR CCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTTGTTGCACGTGGTATTaGAGCAAAATATTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSCCTWY*SKIFFQ
Trigger: CTGAAAGAATATTTTGCTCCAATACCACGTGCAACA...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
3UTR CAA 72 bp TTCACTGTTAACTTGGGGATAATATTCACCACAAAGTaGCAGGCATCATTTTATAGTACAGACTACAGACGA +
Preference number: 4 (lower is better)
Translates to: FTVNLGIIFTTK*QASFYSTDYRR
Trigger: TCGTCTGTAGTCTGTACTATAAAATGATGCCTGCAACTTTGTGGTGAATATTATCCCCAAGTTAACAGTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp GACCTAGAGTCTTGGATTTGTTCCTTTTCTGCTATTATTAGCATCACAAAAGGAATCTTAGGTAAGTGCTaGATATCTCCTGTAATGACA +
Preference number: 4 (lower is better)
Translates to: DLESWICSFSAIISITKGILGKC*ISPVMT
Trigger: TGTCATTACAGGAGATATTCAGCACTTACCTAAGAT...TCCTTTTGTGATGCTAATAATAGCAGAAAAGGAACAAATCCAAGACTCTAGGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR TCA 90 bp GACCTAGAGTCTTGGATTTGTTCCTTTTCTGCTATTATTAGCATCACAAAAGGACTCATGCATATGGCATaGAATAATTCGATTCCCAAT +
Preference number: 4 (lower is better)
Translates to: DLESWICSFSAIISITKGLMHMA*NNSIPN
Trigger: ATTGGGAATCGAATTATTTCATGCCATATGCATGAG...TCCTTTTGTGATGCTAATAATAGCAGAAAAGGAACAAATCCAAGACTCTAGGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTTGTCTGCAAACCTCATaGATATGGCATGAAATAATT +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSCLQTS*IWHEII
Trigger: AATTATTTCATGCCATATGCATGAGGTTTGCAGACA...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGATGTGAACGTGATGTGTaGCTAATAATACTAACACTT +
Preference number: 4 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRCERDV*LIILTL
Trigger: AAGTGTTAGTATTATTAGGCACACATCACGTTCACA...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCTGTGGAAAACAGCCCTaGTTTCAAAAACATTACACT +
Preference number: 4 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFCGKQP*FQKHYT
Trigger: AGTGTAATGTTTTTGAAACCAGGGCTGTTTTCCACA...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTCAAACCTCATGCATATaGCATGAAATAATTCGATTC +
Preference number: 4 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSQTSCI*HEIIRF
Trigger: GAATCGAATTATTTCATGCCATATGCATGAGGTTTG...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CCA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCTTGCAGTGGAGAGTATaGCCCCTTTATCTTTTAAAT +
Preference number: 4 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFLQWRV*PLYLLN
Trigger: ATTTAAAAGATAAAGGGGCCATACTCTCCACTGCAA...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR GCA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCTGTCTGCAAACCTCATaGATATGGCATGAAATAATT +
Preference number: 4 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFCLQTS*IWHEII
Trigger: AATTATTTCATGCCATATGCATGAGGTTTGCAGACA...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS GCA 90 bp GCGGCCGCGGCACCTGCCCAAGCGGCAGCGCTCCCGGCTCGGCAGTaGCGCCCCCGCGCCCTGTGCTCCCCTGCACGCTCCGGCCCTTTC +
Preference number: 5 (lower is better)
Translates to: AAAAPAQAAALPARQ*RPRALCSPARSGPF
Trigger: GAAAGGGCCGGAGCGTGCAGGGGAGCACAGGGCGCGGGGGCGGCACTGCCGAGCCGGGAGCGCTGCCGCTTGGGCAGGTGCCGCGGCCGC
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468573.5
ENST00000676153.1
CDS GCA 90 bp ATGAGGAGCCTGGAGATCCGCGATGGCACCGATGGCCCCGCGGTGTaGGCTCCGGGGTCTGAGAGCGCTCCGCCCGCGGGCAGCTGCGGC +
Preference number: 5 (lower is better)
Translates to: MRSLEIRDGTDGPAV*APGSESAPPAGSCG
Trigger: GCCGCAGCTGCCCGCGGGCGGAGCGCTCTCAGACCCCGGAGCGCACACCGCGGGGCCATCGGTGCCATCGCGGATCTCCAGGCTCCTCAT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000468573.5
ENST00000492335.5
ENST00000676153.1
CDS GCA 90 bp TGCGCTCCAGGTGGCTGTCCCACGCCGGTCTCCGCGCCTGCCCGGTaGGCGGGTGGCGTCCGCTCCACCTTCCCTTCGTCTCCTCCGGCT +
Preference number: 5 (lower is better)
Translates to: CAPGGCPTPVSAPAR*AGGVRSTFPSSPPA
Trigger: AGCCGGAGGAGACGAAGGGAAGGTGGAGCGGACGCCACCCGCGCACCGGGCAGGCGCGGAGACCGGCGTGGGACAGCCACCTGGAGCGCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000468573.5
ENST00000492335.5
ENST00000674678.1
ENST00000675184.1
ENST00000676153.1
CDS GCA 90 bp TGGCAGCTGCGCTCCAGGTGGCTGTCCCACGCCGGTCTCCGCGCCTaGCCGGTGCGCGGGTGGCGTCCGCTCCACCTTCCCTTCGTCTCC +
Preference number: 5 (lower is better)
Translates to: WQLRSRWLSHAGLRA*PVRGWRPLHLPFVS
Trigger: GGAGACGAAGGGAAGGTGGAGCGGACGCCACCCGCGCACCGGGCAGGCGCGGAGACCGGCGTGGGACAGCCACCTGGAGCGCAGCTGCCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000468573.5
ENST00000492335.5
ENST00000674678.1
ENST00000675184.1
ENST00000676153.1
CDS CCA 90 bp AGGTGGCTGTCCCACGCCGGTCTCCGCGCCTGCCCGGTGCGCGGGTaGCGTCCGCTCCACCTTCCCTTCGTCTCCTCCGGCTCCGCGTTC +
Preference number: 5 (lower is better)
Translates to: RWLSHAGLRACPVRG*RPLHLPFVSSGSAF
Trigger: GAACGCGGAGCCGGAGGAGACGAAGGGAAGGTGGAGCGGACGCCACCCGCGCACCGGGCAGGCGCGGAGACCGGCGTGGGACAGCCACCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000468573.5
ENST00000492335.5
ENST00000674678.1
ENST00000675184.1
ENST00000676153.1
CDS CCA 90 bp GGCCCAAAGCAGCAAAGTCCTTCTTTCTGGCAGCTGCGCTCCAGGTaGCTGTCCCACGCCGGTCTCCGCGCCTGCCCGGTGCGCGGGTGG +
Preference number: 5 (lower is better)
Translates to: GPKQQSPSFWQLRSR*LSHAGLRACPVRGW
Trigger: CCACCCGCGCACCGGGCAGGCGCGGAGACCGGCGTGGGACAGCCACCTGGAGCGCAGCTGCCAGAAAGAAGGACTTTGCTGCTTTGGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000468573.5
ENST00000492335.5
ENST00000674678.1
ENST00000675184.1
ENST00000676153.1
CDS GCA 90 bp CGGAGCCGCCCTTCAGTTCATCGCCCGTCTTCCCAGAAGCGCTGCTaGGGCCCCGGCGGACTGATGAGGAGCCTGGAGATCCGCGATGGC +
Preference number: 5 (lower is better)
Translates to: RSRPSVHRPSSQKRC*GPGGLMRSLEIRDG
Trigger: GCCATCGCGGATCTCCAGGCTCCTCATCAGTCCGCCGGGGCCGCAGCAGCGCTTCTGGGAAGACGGGCGATGAACTGAAGGGCGGCTCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000468573.5
ENST00000492335.5
ENST00000674678.1
ENST00000675184.1
ENST00000676153.1
CDS GCA 90 bp GCCCGGAGCCGCCCTTCAGTTCATCGCCCGTCTTCCCAGAAGCGCTaGTGCGGCCCCGGCGGACTGATGAGGAGCCTGGAGATCCGCGAT +
Preference number: 5 (lower is better)
Translates to: ARSRPSVHRPSSQKR*CGPGGLMRSLEIRD
Trigger: ATCGCGGATCTCCAGGCTCCTCATCAGTCCGCCGGGGCCGCAGCAGCGCTTCTGGGAAGACGGGCGATGAACTGAAGGGCGGCTCCGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000468573.5
ENST00000492335.5
ENST00000674678.1
ENST00000675184.1
ENST00000676153.1
CDS GCA 90 bp GTCTCCTCCGGCTCCGCGTTCAGGGAGCGACTGTCCTTAAGATCGTaGCCCCCTGCCCGGAGCCGCCCTTCAGTTCATCGCCCGTCTTCC +
Preference number: 5 (lower is better)
Translates to: VSSGSAFRERLSLRS*PPARSRPSVHRPSS
Trigger: GGAAGACGGGCGATGAACTGAAGGGCGGCTCCGGGCAGGGGGGCACGATCTTAAGGACAGTCGCTCCCTGAACGCGGAGCCGGAGGAGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000468573.5
ENST00000492335.5
ENST00000674678.1
ENST00000675184.1
ENST00000676153.1
CDS GCA 90 bp TCCCCACGAACTCTTCCTCTGCCTGGTGGTGGCGGTCGTGGCTACTaGTGGCCGCTCCTCCTCTCCTTCCTCCTCGCGTTCCTCCTGCTC +
Preference number: 5 (lower is better)
Translates to: SPRTLPLPGGGGRGY*WPLLLSFLLAFLLL
Trigger: GAGCAGGAGGAACGCGAGGAGGAAGGAGAGGAGGAGCGGCCAGCAGTAGCCACGACCGCCACCACCAGGCAGAGGAAGAGTTCGTGGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468573.5
ENST00000676153.1
CDS GCA 90 bp GTTCAGATCCTGGCCCAAAGCAGCAAAGTCCTTCTTTCTGGCAGCTaGGCTCCAGGTGGCTGTCCCACGCCGGTCTCCGCGCCTGCCCGG +
Preference number: 5 (lower is better)
Translates to: VQILAQSSKVLLSGS*APGGCPTPVSAPAR
Trigger: CCGGGCAGGCGCGGAGACCGGCGTGGGACAGCCACCTGGAGCGCAGCTGCCAGAAAGAAGGACTTTGCTGCTTTGGGCCAGGATCTGAAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000468573.5
ENST00000492335.5
ENST00000674678.1
ENST00000675184.1
ENST00000676153.1
CDS CCA 90 bp CCACGAACTCTTCCTCTGCCTGGTGGTGGCGGTCGTGGCTACTGCTaGCCGCTCCTCCTCTCCTTCCTCCTCGCGTTCCTCCTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: PRTLPLPGGGGRGYC*PLLLSFLLAFLLLL
Trigger: GAGGAGCAGGAGGAACGCGAGGAGGAAGGAGAGGAGGAGCGGCCAGCAGTAGCCACGACCGCCACCACCAGGCAGAGGAAGAGTTCGTGG
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468573.5
ENST00000676153.1
CDS TCA 90 bp GGGTCCTACGCCCACGGAGTCTCGCTGATTGCTAGCACAGCAGTCTaGGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCC +
Preference number: 5 (lower is better)
Translates to: GSYAHGVSLIASTAV*DQTARRQRGWGRGA
Trigger: GGCGCCCCTCCCCCAGCCTCGTTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGACTCCGTGGGCGTAGGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255380.8
CDS TCA 90 bp AGAAATTGCCAGCTGCTCGAGAAACATTGTAGCTGCCGAAATGAGTaGCGGTTCCCGGGGGCAGCCCTGCATCGGAGGGGCTGTGTATCC +
Preference number: 5 (lower is better)
Translates to: RNCQLLEKHCSCRNE*RFPGAALHRRGCVS
Trigger: GGATACACAGCCCCTCCGATGCAGGGCTGCCCCCGGGAACCGTCACTCATTTCGGCAGCTACAATGTTTCTCGAGCAGCTGGCAATTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000255380.8
ENST00000448020.1
ENST00000615928.5
ENST00000675184.1
ENST00000675709.1
ENST00000676153.1
ENST00000676433.1
CDS GCA 90 bp GCAGCTTCGAGAACTGCCCGTGGGGTGGACAAAGTTTTCTGTCTCTaGCTCTGTCCCAGAGGCTTGCAGGCCAGCAAGCTCTTTGGTACG +
Preference number: 5 (lower is better)
Translates to: AASRTARGVDKVFCL*LCPRGLQASKLFGT
Trigger: CGTACCAAAGAGCTTGCTGGCCTGCAAGCCTCTGGGACAGAGGCAGAGACAGAAAACTTTGTCCACCCCACGGGCAGTTCTCGAAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS TCA 90 bp CCGGGGGCAGCCCTGCATCGGAGGGGCTGTGTATCCAGGAGGAGCTaGTGTTTGGAAACAAAGGCGAGGTTGTACTGTTATTGTGCAAGG +
Preference number: 5 (lower is better)
Translates to: PGAALHRRGCVSRRS*CLETKARLYCYCAR
Trigger: CCTTGCACAATAACAGTACAACCTCGCCTTTGTTTCCAAACATCAGCTCCTCCTGGATACACAGCCCCTCCGATGCAGGGCTGCCCCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000255380.8
ENST00000448020.1
ENST00000615928.5
ENST00000675184.1
ENST00000675709.1
ENST00000676153.1
ENST00000676433.1
CDS TCA 90 bp GGTCTTGGTCCATCTGCTCGGAGCTGGGTTTCCAGCTCTTGGTTGTaGACCAGAAGTGGCAGCGGCCATACTTCCTCCTGTTGGAGCGTT +
Preference number: 5 (lower is better)
Translates to: GLGPSARSWVSSSWL*TRSGSGHTSSCWSV
Trigger: AACGCTCCAACAGGAGGAAGTATGGCCGCTGCCACTTCTGGTTCACAACCAAGAGCTGGAAACCCAGCTCCGAGCAGATGGACCAAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp AACAAAGGAGGTTGCTTAACACCAAGTCTGGCGAAGCCACGGCGCTCAGCTGACCGCTGTGACAGAGCCTaGGCATCCTTCTTTCCTCCC +
Preference number: 5 (lower is better)
Translates to: NKGGCLTPSLAKPRRSADRCDRA*ASFFPP
Trigger: GGGAGGAAAGAAGGATGCCAAGGCTCTGTCACAGCG...GTCAGCTGAGCGCCGTGGCTTCGCCAGACTTGGTGTTAAGCAACCTCCTTTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS GCA 90 bp CAGAGGGTCATCGGTGGTACCGTCTGGAGAGGAGAAATTGCCAGCTaGTCGAGAAACATTGTAGCTGCCGAAATGAGTGACGGTTCCCGG +
Preference number: 5 (lower is better)
Translates to: QRVIGGTVWRGEIAS*SRNIVAAEMSDGSR
Trigger: CCGGGAACCGTCACTCATTTCGGCAGCTACAATGTTTCTCGAGCAGCTGGCAATTTCTCCTCTCCAGACGGTACCACCGATGACCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255380.8
ENST00000448020.1
ENST00000615928.5
ENST00000675184.1
ENST00000675709.1
ENST00000676153.1
ENST00000676433.1
CDS GCA 90 bp TCTCCAGGGAGGCAGCAGCATCATTGTTGTTCCAACTGTCACTGCTaGTGTGGTCTTGGTCCATCTGCTCGGAGCTGGGTTTCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: SPGRQQHHCCSNCHC*CGLGPSARSWVSSS
Trigger: AGAGCTGGAAACCCAGCTCCGAGCAGATGGACCAAGACCACAGCAGCAGTGACAGTTGGAACAACAATGATGCTGCTGCCTCCCTGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS GCA 90 bp AGTTCTCCAGGGAGGCAGCAGCATCATTGTTGTTCCAACTGTCACTaGTGCTGTGGTCTTGGTCCATCTGCTCGGAGCTGGGTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: SSPGRQQHHCCSNCH*CCGLGPSARSWVSS
Trigger: GCTGGAAACCCAGCTCCGAGCAGATGGACCAAGACCACAGCAGCAGTGACAGTTGGAACAACAATGATGCTGCTGCCTCCCTGGAGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS CCA 90 bp TTGCCAGACGGTATGACCTCCCAGAGGGTCATCGGTGGTACCGTCTaGAGAGGAGAAATTGCCAGCTGCTCGAGAAACATTGTAGCTGCC +
Preference number: 5 (lower is better)
Translates to: LPDGMTSQRVIGGTV*RGEIASCSRNIVAA
Trigger: GGCAGCTACAATGTTTCTCGAGCAGCTGGCAATTTCTCCTCTCCAGACGGTACCACCGATGACCCTCTGGGAGGTCATACCGTCTGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255380.8
ENST00000448020.1
ENST00000615928.5
ENST00000675184.1
ENST00000675709.1
ENST00000676153.1
ENST00000676433.1
CDS CCA 90 bp TTGGAGAAGCTTTTTGGAAAACTGCCTCCATCGTCCACGCTCTTCTaGGCCTGCAGCTTGTCGGCTTTCCTCTCCAAGTCCACCATCCCC +
Preference number: 5 (lower is better)
Translates to: LEKLFGKLPPSSTLF*ACSLSAFLSKSTIP
Trigger: GGGGATGGTGGACTTGGAGAGGAAAGCCGACAAGCTGCAGGCCCAGAAGAGCGTGGACGATGGAGGCAGTTTTCCAAAAAGCTTCTCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp AACAAAGGAGGTTGCTTAACACCAAGTCTGGCGAAGCCACGGCGCTCAGCTGACAGCGATGAAGACCACTaGCCAGACGGTATGACCTCC +
Preference number: 5 (lower is better)
Translates to: NKGGCLTPSLAKPRRSADSDEDH*PDGMTS
Trigger: GGAGGTCATACCGTCTGGCAAGTGGTCTTCATCGCT...GTCAGCTGAGCGCCGTGGCTTCGCCAGACTTGGTGTTAAGCAACCTCCTTTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS TCA 90 bp AGGATGCCCGTTAAGAAAGCGATGAAGACCACTTGCCAGACGGTATaGCCTCCCAGAGGGTCATCGGTGGTACCGTCTGGAGAGGAGAAA +
Preference number: 5 (lower is better)
Translates to: RMPVKKAMKTTCQTV*PPRGSSVVPSGEEK
Trigger: TTTCTCCTCTCCAGACGGTACCACCGATGACCCTCTGGGAGGTCATACCGTCTGGCAAGTGGTCTTCATCGCTTTCTTAACGGGCATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255380.8
ENST00000448020.1
ENST00000615928.5
ENST00000675184.1
ENST00000675709.1
ENST00000676153.1
ENST00000676433.1
CDS TCA 90 bp GGCACCTCCTCCTCCCAAGGGGACTCTTCCTTGGTCGGTCATCCATaGCTCAAGGTTTGCTTTTGTGCGCCTACAATTGCAGCCCAATAC +
Preference number: 5 (lower is better)
Translates to: GTSSSQGDSSLVGHP*LKVCFCAPTIAAQY
Trigger: GTATTGGGCTGCAATTGTAGGCGCACAAAAGCAAACCTTGAGTCATGGATGACCGACCAAGGAAGAGTCCCCTTGGGAGGAGGAGGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468573.5
CDS GCA 90 bp CTGACTCTAGCTGGATGGGAAGCTTGGAGAAGCTTTTTGGAAAACTaGCTCCATCGTCCACGCTCTTCTGGGCCTGCAGCTTGTCGGCTT +
Preference number: 5 (lower is better)
Translates to: LTLAGWEAWRSFLEN*LHRPRSSGPAACRL
Trigger: AAGCCGACAAGCTGCAGGCCCAGAAGAGCGTGGACGATGGAGGCAGTTTTCCAAAAAGCTTCTCCAAGCTTCCCATCCAGCTAGAGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS CCA 90 bp ATCTGCTCGGAGCTGGGTTTCCAGCTCTTGGTTGTGAACCAGAAGTaGCAGCGGCCATACTTCCTCCTGTTGGAGCGTTTCATGCTTTGC +
Preference number: 5 (lower is better)
Translates to: ICSELGFQLLVVNQK*QRPYFLLLERFMLC
Trigger: GCAAAGCATGAAACGCTCCAACAGGAGGAAGTATGGCCGCTGCCACTTCTGGTTCACAACCAAGAGCTGGAAACCCAGCTCCGAGCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS CCA 90 bp AGGGAGGCAGCAGCATCATTGTTGTTCCAACTGTCACTGCTGCTGTaGTCTTGGTCCATCTGCTCGGAGCTGGGTTTCCAGCTCTTGGTT +
Preference number: 5 (lower is better)
Translates to: REAAASLLFQLSLLL*SWSICSELGFQLLV
Trigger: AACCAAGAGCTGGAAACCCAGCTCCGAGCAGATGGACCAAGACCACAGCAGCAGTGACAGTTGGAACAACAATGATGCTGCTGCCTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS CCA 90 bp GTAGCAGGCAGCAATGGACTGGGTAGGTTCCCTCTGCCAGGGCAATaGTTTACACCTAAGTTCAGATCCTGGCCCAAAGCAGCAAAGTCC +
Preference number: 5 (lower is better)
Translates to: VAGSNGLGRFPLPGQ*FTPKFRSWPKAAKS
Trigger: GGACTTTGCTGCTTTGGGCCAGGATCTGAACTTAGGTGTAAACCATTGCCCTGGCAGAGGGAACCTACCCAGTCCATTGCTGCCTGCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000468573.5
ENST00000481779.1
ENST00000492335.5
ENST00000674678.1
ENST00000675184.1
ENST00000676153.1
CDS CCA 90 bp TGGAAACCCTCAGTGCACATAACCCAAAGCAGTATCACTGGTCTTTaGCACCTCCTCCTCCCAAGGGGACTCTTCCTTGGTCGGTCATCC +
Preference number: 5 (lower is better)
Translates to: WKPSVHITQSSITGL*HLLLPRGLFLGRSS
Trigger: GGATGACCGACCAAGGAAGAGTCCCCTTGGGAGGAGGAGGTGCCAAAGACCAGTGATACTGCTTTGGGTTATGTGCACTGAGGGTTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468573.5
CDS CCA 90 bp TCAGGGTTGGAAACCCTCAGTGCACATAACCCAAAGCAGTATCACTaGTCTTTGGCACCTCCTCCTCCCAAGGGGACTCTTCCTTGGTCG +
Preference number: 5 (lower is better)
Translates to: SGLETLSAHNPKQYH*SLAPPPPKGTLPWS
Trigger: CGACCAAGGAAGAGTCCCCTTGGGAGGAGGAGGTGCCAAAGACCAGTGATACTGCTTTGGGTTATGTGCACTGAGGGTTTCCAACCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468573.5
CDS-3UTR CAA 90 bp AACAAAGGAGGTTGCTTAACACCAAGTCTGGCGAAGCCACGGCGCTCAGCTGACTCACACCGGCTCTCTTaGTTGTTCGTTTGGCTCGGT +
Preference number: 5 (lower is better)
Translates to: NKGGCLTPSLAKPRRSADSHRLS*LFVWLG
Trigger: ACCGAGCCAAACGAACAACAAAGAGAGCCGGTGTGA...GTCAGCTGAGCGCCGTGGCTTCGCCAGACTTGGTGTTAAGCAACCTCCTTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp CACAACACGAATGCCCTGTACAAAGGGAAGATATCTCCGCGGCCCTCCCACCTCCCTAAGGTCTGTGGGTaGATGTGTGCGTTTTGTCAC +
Preference number: 5 (lower is better)
Translates to: HNTNALYKGKISPRPSHLPKVCG*MCAFCH
Trigger: GTGACAAAACGCACACATCAACCCACAGACCTTAGG...GAGGTGGGAGGGCCGCGGAGATATCTTCCCTTTGTACAGGGCATTCGTGTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp CACAACACGAATGCCCTGTACAAAGGGAAGATATCTCCGCGGCCCTCCCACCTCGGGTTGGAGTGGTATTaGAAACCATACTACTCCGGG +
Preference number: 5 (lower is better)
Translates to: HNTNALYKGKISPRPSHLGLEWY*KPYYSG
Trigger: CCCGGAGTAGTATGGTTTCAAATACCACTCCAACCC...GAGGTGGGAGGGCCGCGGAGATATCTTCCCTTTGTACAGGGCATTCGTGTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS TCA 90 bp ATTGATACAACCTCATTCTACAAGGCCTGCTCGGGTGCGCGCTTGTaGAAAATGACCGACTGTCTCTGCTGGTACTGCTGCTTGCGCCTC +
Preference number: 5 (lower is better)
Translates to: IDTTSFYKACSGARL*KMTDCLCWYCCLRL
Trigger: GAGGCGCAAGCAGCAGTACCAGCAGAGACAGTCGGTCATTTTTCACAAGCGCGCACCCGAGCAGGCCTTGTAGAATGAGGTTGTATCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS TCA 90 bp TTGCCATGGAAAGAGGCAGTAACCATTGCCGTGGCAACGGTAAACTaGCACAGCACACTGCTGGCGTGCCTTATGGAAAGCTGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: LPWKEAVTIAVATVN*HSTLLACLMESCFC
Trigger: GCAGAAGCAGCTTTCCATAAGGCACGCCAGCAGTGTGCTGTGTCAGTTTACCGTTGCCACGGCAATGGTTACTGCCTCTTTCCATGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674678.1
CDS CCA 90 bp GCAGCAGCATCATTGTTGTTCCAACTGTCACTGCTGCTGTGGTCTTaGTCCATCTGCTCGGAGCTGGGTTTCCAGCTCTTGGTTGTGAAC +
Preference number: 5 (lower is better)
Translates to: AAASLLFQLSLLLWS*SICSELGFQLLVVN
Trigger: GTTCACAACCAAGAGCTGGAAACCCAGCTCCGAGCAGATGGACCAAGACCACAGCAGCAGTGACAGTTGGAACAACAATGATGCTGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp TGGGAAGGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACACTGCTGCTGTGGTCTaGGTCCATCTGCTCGGAGCT +
Preference number: 5 (lower is better)
Translates to: WEGLAALCGKQPWFQKHYTAAVV*VHLLGA
Trigger: AGCTCCGAGCAGATGGACCAAGACCACAGCAGCAGT...GTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCCTTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp CACAACACGAATGCCCTGTACAAAGGGAAGATATCTCCGCGGCCCTCCCACCTCTTACCCACTGAGGAGTaGACGTCAGAAGTCTTAGCT +
Preference number: 5 (lower is better)
Translates to: HNTNALYKGKISPRPSHLLPTEE*TSEVLA
Trigger: AGCTAAGACTTCTGACGTCAACTCCTCAGTGGGTAA...GAGGTGGGAGGGCCGCGGAGATATCTTCCCTTTGTACAGGGCATTCGTGTTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp CACAACACGAATGCCCTGTACAAAGGGAAGATATCTCCGCGGCCCTCCCACCTCTCTCTAGATGATTTTTaGGGGTGGTCTCAGCCCAGA +
Preference number: 5 (lower is better)
Translates to: HNTNALYKGKISPRPSHLSLDDF*GWSQPR
Trigger: TCTGGGCTGAGACCACCCCAAAAAATCATCTAGAGA...GAGGTGGGAGGGCCGCGGAGATATCTTCCCTTTGTACAGGGCATTCGTGTTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS TCA 90 bp CCTCCTAAGGTCTGTGGGTTGATGTGTGCGTTTTGTCACTGCTATTaGTACAACCTCATTCTACAAGGCCTGCTCGGGTGCGCGCTTGTG +
Preference number: 5 (lower is better)
Translates to: PPKVCGLMCAFCHCY*YNLILQGLLGCALV
Trigger: CACAAGCGCGCACCCGAGCAGGCCTTGTAGAATGAGGTTGTATCAATAGCAGTGACAAAACGCACACATCAACCCACAGACCTTAGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS GCA 90 bp TCATGCTTTGCTGTTGAAGTTCGTAACTGCTGCAGCTTCGAGAACTaGCCGTGGGGTGGACAAAGTTTTCTGTCTCTGCCTCTGTCCCAG +
Preference number: 5 (lower is better)
Translates to: SCFAVEVRNCCSFEN*PWGGQSFLSLPLSQ
Trigger: CTGGGACAGAGGCAGAGACAGAAAACTTTGTCCACCCCACGGGCAGTTCTCGAAGCTGCAGCAGTTACGAACTTCAACAGCAAAGCATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS GCA 90 bp ACCAGAAGTGGCAGCGGCCATACTTCCTCCTGTTGGAGCGTTTCATaGTTTGCTGTTGAAGTTCGTAACTGCTGCAGCTTCGAGAACTGC +
Preference number: 5 (lower is better)
Translates to: TRSGSGHTSSCWSVS*FAVEVRNCCSFENC
Trigger: GCAGTTCTCGAAGCTGCAGCAGTTACGAACTTCAACAGCAAAGCATGAAACGCTCCAACAGGAGGAAGTATGGCCGCTGCCACTTCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS GCA 90 bp TCATTGTTGTTCCAACTGTCACTGCTGCTGTGGTCTTGGTCCATCTaGTCGGAGCTGGGTTTCCAGCTCTTGGTTGTGAACCAGAAGTGG +
Preference number: 5 (lower is better)
Translates to: SLLFQLSLLLWSWSI*SELGFQLLVVNQKW
Trigger: CCACTTCTGGTTCACAACCAAGAGCTGGAAACCCAGCTCCGAGCAGATGGACCAAGACCACAGCAGCAGTGACAGTTGGAACAACAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS CCA 90 bp TTTGCTGTTGAAGTTCGTAACTGCTGCAGCTTCGAGAACTGCCCGTaGGGTGGACAAAGTTTTCTGTCTCTGCCTCTGTCCCAGAGGCTT +
Preference number: 5 (lower is better)
Translates to: FAVEVRNCCSFENCP*GGQSFLSLPLSQRL
Trigger: AAGCCTCTGGGACAGAGGCAGAGACAGAAAACTTTGTCCACCCCACGGGCAGTTCTCGAAGCTGCAGCAGTTACGAACTTCAACAGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS CCA 90 bp TATCACTGGTCTTTGGCACCTCCTCCTCCCAAGGGGACTCTTCCTTaGTCGGTCATCCATGACTCAAGGTTTGCTTTTGTGCGCCTACAA +
Preference number: 5 (lower is better)
Translates to: YHWSLAPPPPKGTLP*SVIHDSRFAFVRLQ
Trigger: TTGTAGGCGCACAAAAGCAAACCTTGAGTCATGGATGACCGACCAAGGAAGAGTCCCCTTGGGAGGAGGAGGTGCCAAAGACCAGTGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468573.5
CDS-3UTR CAA 90 bp GTCTGTAAACACCACCTCACACTGAATACAAAAGCAGCTTCTACCCAGCTCTGGACTGCTGCTGTGGTCTaGGTCCATCTGCTCGGAGCT +
Preference number: 5 (lower is better)
Translates to: VCKHHLTLNTKAASTQLWTAAVV*VHLLGA
Trigger: AGCTCCGAGCAGATGGACCAAGACCACAGCAGCAGT...CCAGAGCTGGGTAGAAGCTGCTTTTGTATTCAGTGTGAGGTGGTGTTTACAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp TGCAGTGTTCCACTTGGGGTCTGGATTCCCACTTTTGGGATCCTTGGGAAGAATCCTGCAGTGTTCCACTaGGGGTCTGGATTCCCACTT +
Preference number: 5 (lower is better)
Translates to: CSVPLGVWIPTFGILGKNPAVFH*GSGFPL
Trigger: AAGTGGGAATCCAGACCCCAAGTGGAACACTGCAGG...ATTCTTCCCAAGGATCCCAAAAGTGGGAATCCAGACCCCAAGTGGAACACTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp GTCTGTAAACACCACCTCACACTGAATACAAAAGCAGCTTCTACCCAGCTCTGGCGCTGTGACAGAGCCTaGGCATCCTTCTTTCCTCCC +
Preference number: 5 (lower is better)
Translates to: VCKHHLTLNTKAASTQLWRCDRA*ASFFPP
Trigger: GGGAGGAAAGAAGGATGCCAAGGCTCTGTCACAGCG...CCAGAGCTGGGTAGAAGCTGCTTTTGTATTCAGTGTGAGGTGGTGTTTACAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp AACAAAGGAGGTTGCTTAACACCAAGTCTGGCGAAGCCACGGCGCTCAGCTGACTCTCTAGATGATTTTTaGGGGTGGTCTCAGCCCAGA +
Preference number: 5 (lower is better)
Translates to: NKGGCLTPSLAKPRRSADSLDDF*GWSQPR
Trigger: TCTGGGCTGAGACCACCCCAAAAAATCATCTAGAGA...GTCAGCTGAGCGCCGTGGCTTCGCCAGACTTGGTGTTAAGCAACCTCCTTTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS TCA 90 bp GCTTTCTTCTCCTTGACCAGGGACATCCTTTTCCGCTTAGTGATCTaGCTTCTGGTCTTCAGAGCAAACCTCTTGGCCAGAGTGGCTTCC +
Preference number: 5 (lower is better)
Translates to: AFFSLTRDILFRLVI*LLVFRANLLARVAS
Trigger: GGAAGCCACTCTGGCCAAGAGGTTTGCTCTGAAGACCAGAAGTCAGATCACTAAGCGGAAAAGGATGTCCCTGGTCAAGGAGAAGAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS TCA 90 bp AGAAGTCACCCCGCCCTCGCCTTCCTCCTCCTAAGGTCTGTGGGTTaGTGTGTGCGTTTTGTCACTGCTATTGATACAACCTCATTCTAC +
Preference number: 5 (lower is better)
Translates to: RSHPALAFLLLRSVG*CVRFVTAIDTTSFY
Trigger: GTAGAATGAGGTTGTATCAATAGCAGTGACAAAACGCACACATCAACCCACAGACCTTAGGAGGAGGAAGGCGAGGGCGGGGTGACTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS GCA 90 bp TCCTCCTGTTGGAGCGTTTCATGCTTTGCTGTTGAAGTTCGTAACTaGTGCAGCTTCGAGAACTGCCCGTGGGGTGGACAAAGTTTTCTG +
Preference number: 5 (lower is better)
Translates to: SSCWSVSCFAVEVRN*CSFENCPWGGQSFL
Trigger: CAGAAAACTTTGTCCACCCCACGGGCAGTTCTCGAAGCTGCAGCAGTTACGAACTTCAACAGCAAAGCATGAAACGCTCCAACAGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS CCA 90 bp CAGCCCTGCATCGGAGGGGCTGTGTATCCAGGAGGAGCTGATGTTTaGAAACAAAGGCGAGGTTGTACTGTTATTGTGCAAGGTCATTGT +
Preference number: 5 (lower is better)
Translates to: QPCIGGAVYPGGADV*KQRRGCTVIVQGHC
Trigger: ACAATGACCTTGCACAATAACAGTACAACCTCGCCTTTGTTTCCAAACATCAGCTCCTCCTGGATACACAGCCCCTCCGATGCAGGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255380.8
ENST00000448020.1
ENST00000615928.5
ENST00000675184.1
ENST00000675709.1
ENST00000676153.1
ENST00000676433.1
CDS CCA 90 bp GAGTTGACGTCAGAAGTCTTAGCTGTGTCCACGGCTGACTCTAGCTaGATGGGAAGCTTGGAGAAGCTTTTTGGAAAACTGCCTCCATCG +
Preference number: 5 (lower is better)
Translates to: ELTSEVLAVSTADSS*MGSLEKLFGKLPPS
Trigger: CGATGGAGGCAGTTTTCCAAAAAGCTTCTCCAAGCTTCCCATCCAGCTAGAGTCAGCCGTGGACACAGCTAAGACTTCTGACGTCAACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp TGGGAAGGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACTCACACCGGCTCTCTTaGTTGTTCGTTTGGCTCGGT +
Preference number: 5 (lower is better)
Translates to: WEGLAALCGKQPWFQKHYSHRLS*LFVWLG
Trigger: ACCGAGCCAAACGAACAACAAAGAGAGCCGGTGTGA...GTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCCTTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp AACAAAGGAGGTTGCTTAACACCAAGTCTGGCGAAGCCACGGCGCTCAGCTGACCTTTCCAACAAAGTATaGCCAGAACAAGATGGCAGG +
Preference number: 5 (lower is better)
Translates to: NKGGCLTPSLAKPRRSADLSNKV*PEQDGR
Trigger: CCTGCCATCTTGTTCTGGCAATACTTTGTTGGAAAG...GTCAGCTGAGCGCCGTGGCTTCGCCAGACTTGGTGTTAAGCAACCTCCTTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp CTGATCCCTGGAATCCTTCTCTGTGCCACTCTGGTATTAGACTTCTCCGCTGTGAGGCCAGCAAGCTCTTaGGTACGCTTTTCAGTTTCC +
Preference number: 5 (lower is better)
Translates to: LIPGILLCATLVLDFSAVRPASS*VRFSVS
Trigger: GGAAACTGAAAAGCGTACCAAAGAGCTTGCTGGCCT...CACAGCGGAGAAGTCTAATACCAGAGTGGCACAGAGAAGGATTCCAGGGATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp CTGATCCCTGGAATCCTTCTCTGTGCCACTCTGGTATTAGACTTCTCCGCTGTGCCATACTTCCTCCTGTaGGAGCGTTTCATGCTTTGC +
Preference number: 5 (lower is better)
Translates to: LIPGILLCATLVLDFSAVPYFLL*ERFMLC
Trigger: GCAAAGCATGAAACGCTCCAACAGGAGGAAGTATGG...CACAGCGGAGAAGTCTAATACCAGAGTGGCACAGAGAAGGATTCCAGGGATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp TGGGAAGGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACCTGGGTTTCCAGCTCTaGGTTGTGAACCAGAAGTGG +
Preference number: 5 (lower is better)
Translates to: WEGLAALCGKQPWFQKHYLGFQL*VVNQKW
Trigger: CCACTTCTGGTTCACAACCAAGAGCTGGAAACCCAG...GTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCCTTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp GTCATGGTAGCTGCTGACCTCAGTTTTGACCGATTTGGCATCAGAAGGCAAATTTTCTGGGCCTGCAGCTaGTCGGCTTTCCTCTCCAAG +
Preference number: 5 (lower is better)
Translates to: VMVAADLSFDRFGIRRQIFWACS*SAFLSK
Trigger: CTTGGAGAGGAAAGCCGACAAGCTGCAGGCCCAGAA...AATTTGCCTTCTGATGCCAAATCGGTCAAAACTGAGGTCAGCAGCTACCATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp CACAACACGAATGCCCTGTACAAAGGGAAGATATCTCCGCGGCCCTCCCACCTCGCAAAGTGGCTAATCTaGAAATGTCTGCAAACCTCA +
Preference number: 5 (lower is better)
Translates to: HNTNALYKGKISPRPSHLAKWLI*KCLQTS
Trigger: TGAGGTTTGCAGACATTTCAAGATTAGCCACTTTGC...GAGGTGGGAGGGCCGCGGAGATATCTTCCCTTTGTACAGGGCATTCGTGTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp GGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACACTGGGGGTAGGGTCAGAACTTaGTGTGAGTCTCTGTGGTTC +
Preference number: 5 (lower is better)
Translates to: GLAALCGKQPWFQKHYTGGRVRT*CESLWF
Trigger: GAACCACAGAGACTCACACAAAGTTCTGACCCTACC...CCCAGTGTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS GCA 90 bp TCCTGTTGGAGCGTTTCATGCTTTGCTGTTGAAGTTCGTAACTGCTaGAGCTTCGAGAACTGCCCGTGGGGTGGACAAAGTTTTCTGTCT +
Preference number: 5 (lower is better)
Translates to: SCWSVSCFAVEVRNC*SFENCPWGGQSFLS
Trigger: AGACAGAAAACTTTGTCCACCCCACGGGCAGTTCTCGAAGCTGCAGCAGTTACGAACTTCAACAGCAAAGCATGAAACGCTCCAACAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp TACCTAGAAACTCTATTTTGTGAGTTTGCCCGACCTCAGGTGCTGGGTTGGAGTCTGGGTTTCCAGCTCTaGGTTGTGAACCAGAAGTGG +
Preference number: 5 (lower is better)
Translates to: YLETLFCEFARPQVLGWSLGFQL*VVNQKW
Trigger: CCACTTCTGGTTCACAACCAAGAGCTGGAAACCCAG...ACTCCAACCCAGCACCTGAGGTCGGGCAAACTCACAAAATAGAGTTTCTAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp TGGGAAGGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACGAGGCAGCAGCATCATaGTTGTTCCAACTGTCACTG +
Preference number: 5 (lower is better)
Translates to: WEGLAALCGKQPWFQKHYEAAAS*LFQLSL
Trigger: CAGTGACAGTTGGAACAACAATGATGCTGCTGCCTC...GTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCCTTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp CACAACACGAATGCCCTGTACAAAGGGAAGATATCTCCGCGGCCCTCCCACCTCGTTGATGTGTGCGTTTaGTCACTGCTATTGATACAA +
Preference number: 5 (lower is better)
Translates to: HNTNALYKGKISPRPSHLVDVCV*SLLLIQ
Trigger: TTGTATCAATAGCAGTGACAAAACGCACACATCAAC...GAGGTGGGAGGGCCGCGGAGATATCTTCCCTTTGTACAGGGCATTCGTGTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp CTGATCCCTGGAATCCTTCTCTGTGCCACTCTGGTATTAGACTTCTCCGCTGTGCATCAACAAAGGAGGTaGCTTAACACCAAGTCTGGC +
Preference number: 5 (lower is better)
Translates to: LIPGILLCATLVLDFSAVHQQRR*LNTKSG
Trigger: GCCAGACTTGGTGTTAAGCAACCTCCTTTGTTGATG...CACAGCGGAGAAGTCTAATACCAGAGTGGCACAGAGAAGGATTCCAGGGATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp TGGGAAGGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACCCTGGAGAATGGAGATaGAGTGTGTGTGTGTGTGCT +
Preference number: 5 (lower is better)
Translates to: WEGLAALCGKQPWFQKHYPGEWR*SVCVCA
Trigger: AGCACACACACACACACTCAATCTCCATTCTCCAGG...GTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCCTTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp AACAAAGGAGGTTGCTTAACACCAAGTCTGGCGAAGCCACGGCGCTCAGCTGACAGAGAAGCTTCGGTGTaGTTGCTTAGTTTGAGCAAT +
Preference number: 5 (lower is better)
Translates to: NKGGCLTPSLAKPRRSADREASV*LLSLSN
Trigger: ATTGCTCAAACTAAGCAACAACACCGAAGCTTCTCT...GTCAGCTGAGCGCCGTGGCTTCGCCAGACTTGGTGTTAAGCAACCTCCTTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp TGGGAAGGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACACCTCAGGTGCTGGGTaGGAGTGGTATTTGAAACCA +
Preference number: 5 (lower is better)
Translates to: WEGLAALCGKQPWFQKHYTSGAG*EWYLKP
Trigger: TGGTTTCAAATACCACTCCAACCCAGCACCTGAGGT...GTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCCTTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp CACAACACGAATGCCCTGTACAAAGGGAAGATATCTCCGCGGCCCTCCCACCTCAAGCCTGCACCAAACTaGGTAACAGTTCCTATATTT +
Preference number: 5 (lower is better)
Translates to: HNTNALYKGKISPRPSHLKPAPN*VTVPIF
Trigger: AAATATAGGAACTGTTACCAAGTTTGGTGCAGGCTT...GAGGTGGGAGGGCCGCGGAGATATCTTCCCTTTGTACAGGGCATTCGTGTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp GGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACACTGGGGAAACAAAGGCGAGGTaGTACTGTTATTGTGCAAGG +
Preference number: 5 (lower is better)
Translates to: GLAALCGKQPWFQKHYTGETKAR*YCYCAR
Trigger: CCTTGCACAATAACAGTACAACCTCGCCTTTGTTTC...CCCAGTGTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp GGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACACTGGGACCGTCTTCAGCTGCTaGTTGACCTTAAATGACACA +
Preference number: 5 (lower is better)
Translates to: GLAALCGKQPWFQKHYTGTVFSC*LTLNDT
Trigger: TGTGTCATTTAAGGTCAACAAGCAGCTGAAGACGGT...CCCAGTGTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp TACCTAGAAACTCTATTTTGTGAGTTTGCCCGACCTCAGGTGCTGGGTTGGAGTAGGCCAGCAAGCTCTTaGGTACGCTTTTCAGTTTCC +
Preference number: 5 (lower is better)
Translates to: YLETLFCEFARPQVLGWSRPASS*VRFSVS
Trigger: GGAAACTGAAAAGCGTACCAAAGAGCTTGCTGGCCT...ACTCCAACCCAGCACCTGAGGTCGGGCAAACTCACAAAATAGAGTTTCTAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp GTCTGTAAACACCACCTCACACTGAATACAAAAGCAGCTTCTACCCAGCTCTGGGCAGCAGCATCATTGTaGTTCCAACTGTCACTGCTG +
Preference number: 5 (lower is better)
Translates to: VCKHHLTLNTKAASTQLWAAASL*FQLSLL
Trigger: CAGCAGTGACAGTTGGAACAACAATGATGCTGCTGC...CCAGAGCTGGGTAGAAGCTGCTTTTGTATTCAGTGTGAGGTGGTGTTTACAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp GTCTGTAAACACCACCTCACACTGAATACAAAAGCAGCTTCTACCCAGCTCTGGCCACTTTTGGGATCCTaGGGAAGAATGTGGGAACTG +
Preference number: 5 (lower is better)
Translates to: VCKHHLTLNTKAASTQLWPLLGS*GRMWEL
Trigger: CAGTTCCCACATTCTTCCCAAGGATCCCAAAAGTGG...CCAGAGCTGGGTAGAAGCTGCTTTTGTATTCAGTGTGAGGTGGTGTTTACAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp TGGGAAGGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACCATCAACAAAGGAGGTaGCTTAACACCAAGTCTGGC +
Preference number: 5 (lower is better)
Translates to: WEGLAALCGKQPWFQKHYHQQRR*LNTKSG
Trigger: GCCAGACTTGGTGTTAAGCAACCTCCTTTGTTGATG...GTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCCTTCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp TGGGAAGGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACCCCGATTTAGCTCTGTaGAGACATCAACAAAGGAGG +
Preference number: 5 (lower is better)
Translates to: WEGLAALCGKQPWFQKHYPDLAL*RHQQRR
Trigger: CCTCCTTTGTTGATGTCTCAACAGAGCTAAATCGGG...GTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCCTTCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp AACAAAGGAGGTTGCTTAACACCAAGTCTGGCGAAGCCACGGCGCTCAGCTGACAGTACACTTCTACTGTaGTCAAAGTCGTCTGTAAAC +
Preference number: 5 (lower is better)
Translates to: NKGGCLTPSLAKPRRSADSTLLL*SKSSVN
Trigger: GTTTACAGACGACTTTGACAACAGTAGAAGTGTACT...GTCAGCTGAGCGCCGTGGCTTCGCCAGACTTGGTGTTAAGCAACCTCCTTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp GGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACACTGGGCACAATGGTGGAGCTTaGTTCAGTTCCCATCAGATT +
Preference number: 5 (lower is better)
Translates to: GLAALCGKQPWFQKHYTGHNGGA*FSSHQI
Trigger: AATCTGATGGGAACTGAACAAAGCTCCACCATTGTG...CCCAGTGTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp CTGATCCCTGGAATCCTTCTCTGTGCCACTCTGGTATTAGACTTCTCCGCTGTGCACAATGGTGGAGCTTaGTTCAGTTCCCATCAGATT +
Preference number: 5 (lower is better)
Translates to: LIPGILLCATLVLDFSAVHNGGA*FSSHQI
Trigger: AATCTGATGGGAACTGAACAAAGCTCCACCATTGTG...CACAGCGGAGAAGTCTAATACCAGAGTGGCACAGAGAAGGATTCCAGGGATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp GGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACACTGGGGAAGCTTCGGTGTTGTaGCTTAGTTTGAGCAATGAG +
Preference number: 5 (lower is better)
Translates to: GLAALCGKQPWFQKHYTGEASVL*LSLSNE
Trigger: CTCATTGCTCAAACTAAGCAACAACACCGAAGCTTC...CCCAGTGTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp TGGGAAGGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACCTGCTGACCTCAGTTTaGACCGATTTGGCATCAGAA +
Preference number: 5 (lower is better)
Translates to: WEGLAALCGKQPWFQKHYLLTSV*TDLASE
Trigger: TTCTGATGCCAAATCGGTCAAAACTGAGGTCAGCAG...GTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCCTTCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp GTCTGTAAACACCACCTCACACTGAATACAAAAGCAGCTTCTACCCAGCTCTGGACCTCAGGTGCTGGGTaGGAGTGGTATTTGAAACCA +
Preference number: 5 (lower is better)
Translates to: VCKHHLTLNTKAASTQLWTSGAG*EWYLKP
Trigger: TGGTTTCAAATACCACTCCAACCCAGCACCTGAGGT...CCAGAGCTGGGTAGAAGCTGCTTTTGTATTCAGTGTGAGGTGGTGTTTACAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp TGCAGTGTTCCACTTGGGGTCTGGATTCCCACTTTTGGGATCCTTGGGAAGAATAAAGAAAGAAGGGCTTaGCCCAAACTGTGGCCATCA +
Preference number: 5 (lower is better)
Translates to: CSVPLGVWIPTFGILGKNKERRA*PKLWPS
Trigger: TGATGGCCACAGTTTGGGCAAAGCCCTTCTTTCTTT...ATTCTTCCCAAGGATCCCAAAAGTGGGAATCCAGACCCCAAGTGGAACACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS GCA 90 bp TCTTCCATATCTGGCTTAACGAACAAACAGCTGGACTCTCTTCTCTaGTTCCGCACTCTGCGTACTACAATACTGCCCCTCATGAATCCT +
Preference number: 5 (lower is better)
Translates to: SSISGLTNKQLDSLL*FRTLRTTILPLMNP
Trigger: AGGATTCATGAGGGGCAGTATTGTAGTACGCAGAGTGCGGAAGCAGAGAAGAGAGTCCAGCTGTTTGTTCGTTAAGCCAGATATGGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492335.5
CDS CCA 90 bp AGGTTCCCTCTGCCAGGGCAATGGTTTACACCTAAGTTCAGATCCTaGCCCAAAGCAGCAAAGTCCTTCTTTAATTATGGCATAAGGGGA +
Preference number: 5 (lower is better)
Translates to: RFPLPGQWFTPKFRS*PKAAKSFFNYGIRG
Trigger: TCCCCTTATGCCATAATTAAAGAAGGACTTTGCTGCTTTGGGCCAGGATCTGAACTTAGGTGTAAACCATTGCCCTGGCAGAGGGAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481779.1
CDS-3UTR CAA 90 bp TGGGAAGGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACGGAGCGTTTCATGCTTaGCTGTTGAAGTTCGTAACT +
Preference number: 5 (lower is better)
Translates to: WEGLAALCGKQPWFQKHYGAFHA*LLKFVT
Trigger: AGTTACGAACTTCAACAGCAAAGCATGAAACGCTCC...GTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCCTTCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp TGCAGTGTTCCACTTGGGGTCTGGATTCCCACTTTTGGGATCCTTGGGAAGAATCAAGCCCTATTTTCTTaGAGAAGGTGCCATTCAGCA +
Preference number: 5 (lower is better)
Translates to: CSVPLGVWIPTFGILGKNQALFS*RRCHSA
Trigger: TGCTGAATGGCACCTTCTCAAAGAAAATAGGGCTTG...ATTCTTCCCAAGGATCCCAAAAGTGGGAATCCAGACCCCAAGTGGAACACTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS TCA 90 bp GACCAGCTCCACCTAAGTGTTAATGTTTGGTTCTGTGGGTGGCCTTaGATTTGTAACTTTGCAGCGTGCCACTCTTGCTTCATTTCATCC +
Preference number: 5 (lower is better)
Translates to: DQLHLSVNVWFCGWP*ICNFAACHSCFISS
Trigger: GGATGAAATGAAGCAAGAGTGGCACGCTGCAAAGTTACAAATTCAAGGCCACCCACAGAACCAAACATTAACACTTAGGTGGAGCTGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468573.5
ENST00000675709.1
CDS GCA 90 bp GGTCGGTCATCCATGACTCAAGGTTTGCTTTTGTGCGCCTACAATTaGAGCCCAATACTTTCCTCTGTTGTTTCATCAAGGTTTGGGTAC +
Preference number: 5 (lower is better)
Translates to: GRSSMTQGLLLCAYN*SPILSSVVSSRFGY
Trigger: GTACCCAAACCTTGATGAAACAACAGAGGAAAGTATTGGGCTGCAATTGTAGGCGCACAAAAGCAAACCTTGAGTCATGGATGACCGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468573.5
CDS GCA 90 bp GGACTCTTCCTTGGTCGGTCATCCATGACTCAAGGTTTGCTTTTGTaGGCCTACAATTGCAGCCCAATACTTTCCTCTGTTGTTTCATCA +
Preference number: 5 (lower is better)
Translates to: GLFLGRSSMTQGLLL*AYNCSPILSSVVSS
Trigger: TGATGAAACAACAGAGGAAAGTATTGGGCTGCAATTGTAGGCGCACAAAAGCAAACCTTGAGTCATGGATGACCGACCAAGGAAGAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468573.5
CDS-3UTR CAA 90 bp GCCACAGGAAAGCTCCAATATACTCTATTCATTGCTCAAGTGGACCTTAAAGAACTCTTTGTTGTTCGTTaGGCTCGGTACGTGAGCGGC +
Preference number: 5 (lower is better)
Translates to: ATGKLQYTLFIAQVDLKELFVVR*ARYVSG
Trigger: GCCGCTCACGTACCGAGCCAAACGAACAACAAAGAG...TTCTTTAAGGTCCACTTGAGCAATGAATAGAGTATATTGGAGCTTTCCTGTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp TACCTAGAAACTCTATTTTGTGAGTTTGCCCGACCTCAGGTGCTGGGTTGGAGTGGAGCGTTTCATGCTTaGCTGTTGAAGTTCGTAACT +
Preference number: 5 (lower is better)
Translates to: YLETLFCEFARPQVLGWSGAFHA*LLKFVT
Trigger: AGTTACGAACTTCAACAGCAAAGCATGAAACGCTCC...ACTCCAACCCAGCACCTGAGGTCGGGCAAACTCACAAAATAGAGTTTCTAGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAACTGCTGCTGTGGTCTaGGTCCATCTGCTCGGAGCT +
Preference number: 5 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRTAAVV*VHLLGA
Trigger: AGCTCCGAGCAGATGGACCAAGACCACAGCAGCAGT...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTACTGCTGCTGTGGTCTaGGTCCATCTGCTCGGAGCT +
Preference number: 5 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSTAAVV*VHLLGA
Trigger: AGCTCCGAGCAGATGGACCAAGACCACAGCAGCAGT...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGATTCTGGGCCTGCAGCTaGTCGGCTTTCCTCTCCAAG +
Preference number: 5 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRFWACS*SAFLSK
Trigger: CTTGGAGAGGAAAGCCGACAAGCTGCAGGCCCAGAA...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTTTCTGGGCCTGCAGCTaGTCGGCTTTCCTCTCCAAG +
Preference number: 5 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSFWACS*SAFLSK
Trigger: CTTGGAGAGGAAAGCCGACAAGCTGCAGGCCCAGAA...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp GTCTGTAAACACCACCTCACACTGAATACAAAAGCAGCTTCTACCCAGCTCTGGCACAGCAGCAGCATCTaGAAAGTGGTTCTGAATGTT +
Preference number: 5 (lower is better)
Translates to: VCKHHLTLNTKAASTQLWHSSSI*KVVLNV
Trigger: AACATTCAGAACCACTTTCAAGATGCTGCTGCTGTG...CCAGAGCTGGGTAGAAGCTGCTTTTGTATTCAGTGTGAGGTGGTGTTTACAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp GTCATGGTAGCTGCTGACCTCAGTTTTGACCGATTTGGCATCAGAAGGCAAATTTCTGGATTCCCACTTTaGGGATCCTTGGGAAGAATG +
Preference number: 5 (lower is better)
Translates to: VMVAADLSFDRFGIRRQISGFPL*GSLGRM
Trigger: CATTCTTCCCAAGGATCCCAAAAGTGGGAATCCAGA...AATTTGCCTTCTGATGCCAAATCGGTCAAAACTGAGGTCAGCAGCTACCATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp GAGTGGTATTTGAAACCATACTACTCCGGGTTTGCCAACAAATTTCAAAGCTTCGATGTGGTTCATTCTTaGAGCTCAGAGGGGCCCCGA +
Preference number: 5 (lower is better)
Translates to: EWYLKPYYSGFANKFQSFDVVHS*SSEGPR
Trigger: TCGGGGCCCCTCTGAGCTCAAAGAATGAACCACATC...GAAGCTTTGAAATTTGTTGGCAAACCCGGAGTAGTATGGTTTCAAATACCACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp TGGGAAGGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACGTAATGACAAGCCCTTaGAGAAATGCACGTGTAACT +
Preference number: 5 (lower is better)
Translates to: WEGLAALCGKQPWFQKHYVMTSP*RNARVT
Trigger: AGTTACACGTGCATTTCTCAAAGGGCTTGTCATTAC...GTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCCTTCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp TGGGAAGGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACGCAAAGTGGCTAATCTaGAAATGTCTGCAAACCTCA +
Preference number: 5 (lower is better)
Translates to: WEGLAALCGKQPWFQKHYAKWLI*KCLQTS
Trigger: TGAGGTTTGCAGACATTTCAAGATTAGCCACTTTGC...GTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCCTTCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp GGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACACTGGGGTGTTGTTGCTTAGTTaGAGCAATGAGGATAAAACC +
Preference number: 5 (lower is better)
Translates to: GLAALCGKQPWFQKHYTGVLLLS*SNEDKT
Trigger: GGTTTTATCCTCATTGCTCAAACTAAGCAACAACAC...CCCAGTGTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp GTCTGTAAACACCACCTCACACTGAATACAAAAGCAGCTTCTACCCAGCTCTGGGAAGCTTCGGTGTTGTaGCTTAGTTTGAGCAATGAG +
Preference number: 5 (lower is better)
Translates to: VCKHHLTLNTKAASTQLWEASVL*LSLSNE
Trigger: CTCATTGCTCAAACTAAGCAACAACACCGAAGCTTC...CCAGAGCTGGGTAGAAGCTGCTTTTGTATTCAGTGTGAGGTGGTGTTTACAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp GTCATGGTAGCTGCTGACCTCAGTTTTGACCGATTTGGCATCAGAAGGCAAATTCTGCTGACCTCAGTTTaGACCGATTTGGCATCAGAA +
Preference number: 5 (lower is better)
Translates to: VMVAADLSFDRFGIRRQILLTSV*TDLASE
Trigger: TTCTGATGCCAAATCGGTCAAAACTGAGGTCAGCAG...AATTTGCCTTCTGATGCCAAATCGGTCAAAACTGAGGTCAGCAGCTACCATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp TGGGAAGGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACCATACTACTCCGGGTTaGCCAACAAATTTCAAAGCT +
Preference number: 5 (lower is better)
Translates to: WEGLAALCGKQPWFQKHYHTTPG*PTNFKA
Trigger: AGCTTTGAAATTTGTTGGCAAACCCGGAGTAGTATG...GTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCCTTCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp TACCTAGAAACTCTATTTTGTGAGTTTGCCCGACCTCAGGTGCTGGGTTGGAGTCTCAGGTCTGCAATGTaGACTCACACATTAATGCTG +
Preference number: 5 (lower is better)
Translates to: YLETLFCEFARPQVLGWSLRSAM*THTLML
Trigger: CAGCATTAATGTGTGAGTCAACATTGCAGACCTGAG...ACTCCAACCCAGCACCTGAGGTCGGGCAAACTCACAAAATAGAGTTTCTAGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp CTGATCCCTGGAATCCTTCTCTGTGCCACTCTGGTATTAGACTTCTCCGCTGTGCATGTGTTTGATTGCTaGCAGAACAGGATAAAGGAT +
Preference number: 5 (lower is better)
Translates to: LIPGILLCATLVLDFSAVHVFDC*QNRIKD
Trigger: ATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG...CACAGCGGAGAAGTCTAATACCAGAGTGGCACAGAGAAGGATTCCAGGGATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp GGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACACTGGGAAGCCTGCACCAAACTaGGTAACAGTTCCTATATTT +
Preference number: 5 (lower is better)
Translates to: GLAALCGKQPWFQKHYTGKPAPN*VTVPIF
Trigger: AAATATAGGAACTGTTACCAAGTTTGGTGCAGGCTT...CCCAGTGTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGCGATGAAGACCACTaGCCAGACGGTATGACCTCC +
Preference number: 5 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRSDEDH*PDGMTS
Trigger: GGAGGTCATACCGTCTGGCAAGTGGTCTTCATCGCT...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTAGCGATGAAGACCACTaGCCAGACGGTATGACCTCC +
Preference number: 5 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSSDEDH*PDGMTS
Trigger: GGAGGTCATACCGTCTGGCAAGTGGTCTTCATCGCT...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGACTCTTTGTTGTTCGTTaGGCTCGGTACGTGAGCGGC +
Preference number: 5 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRLFVVR*ARYVSG
Trigger: GCCGCTCACGTACCGAGCCAAACGAACAACAAAGAG...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTCTCTTTGTTGTTCGTTaGGCTCGGTACGTGAGCGGC +
Preference number: 5 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSLFVVR*ARYVSG
Trigger: GCCGCTCACGTACCGAGCCAAACGAACAACAAAGAG...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTCACCGGCTCTCTTTGTaGTTCGTTTGGCTCGGTACG +
Preference number: 5 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSHRLSL*FVWLGT
Trigger: CGTACCGAGCCAAACGAACAACAAAGAGAGCCGGTG...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp GTCTGTAAACACCACCTCACACTGAATACAAAAGCAGCTTCTACCCAGCTCTGGTTTCATGCTTTGCTGTaGAAGTTCGTAACTGCTGCA +
Preference number: 5 (lower is better)
Translates to: VCKHHLTLNTKAASTQLWFHALL*KFVTAA
Trigger: TGCAGCAGTTACGAACTTCAACAGCAAAGCATGAAA...CCAGAGCTGGGTAGAAGCTGCTTTTGTATTCAGTGTGAGGTGGTGTTTACAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp GAGTGGTATTTGAAACCATACTACTCCGGGTTTGCCAACAAATTTCAAAGCTTCTCCGATGAGGGTAACTaGGTGGAGTTGAGGATGGTG +
Preference number: 5 (lower is better)
Translates to: EWYLKPYYSGFANKFQSFSDEGN*VELRMV
Trigger: CACCATCCTCAACTCCACCAAGTTACCCTCATCGGA...GAAGCTTTGAAATTTGTTGGCAAACCCGGAGTAGTATGGTTTCAAATACCACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp TGGGAAGGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACGTTGATGTGTGCGTTTaGTCACTGCTATTGATACAA +
Preference number: 5 (lower is better)
Translates to: WEGLAALCGKQPWFQKHYVDVCV*SLLLIQ
Trigger: TTGTATCAATAGCAGTGACAAAACGCACACATCAAC...GTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCCTTCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGACCTGCAGTGTTCCACTaGGGGTCTGGATTCCCACTT +
Preference number: 5 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRPAVFH*GSGFPL
Trigger: AAGTGGGAATCCAGACCCCAAGTGGAACACTGCAGG...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAGATGTGGTTCATTCTTaGAGCTCAGAGGGGCCCCGA +
Preference number: 5 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRDVVHS*SSEGPR
Trigger: TCGGGGCCCCTCTGAGCTCAAAGAATGAACCACATC...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp GTCTGTAAACACCACCTCACACTGAATACAAAAGCAGCTTCTACCCAGCTCTGGGTAATGACAAGCCCTTaGAGAAATGCACGTGTAACT +
Preference number: 5 (lower is better)
Translates to: VCKHHLTLNTKAASTQLWVMTSP*RNARVT
Trigger: AGTTACACGTGCATTTCTCAAAGGGCTTGTCATTAC...CCAGAGCTGGGTAGAAGCTGCTTTTGTATTCAGTGTGAGGTGGTGTTTACAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp TACCTAGAAACTCTATTTTGTGAGTTTGCCCGACCTCAGGTGCTGGGTTGGAGTCATACTACTCCGGGTTaGCCAACAAATTTCAAAGCT +
Preference number: 5 (lower is better)
Translates to: YLETLFCEFARPQVLGWSHTTPG*PTNFKA
Trigger: AGCTTTGAAATTTGTTGGCAAACCCGGAGTAGTATG...ACTCCAACCCAGCACCTGAGGTCGGGCAAACTCACAAAATAGAGTTTCTAGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp GCCACAGGAAAGCTCCAATATACTCTATTCATTGCTCAAGTGGACCTTAAAGAACTCTATTTTGTGAGTTaGCCCGACCTCAGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: ATGKLQYTLFIAQVDLKELYFVS*PDLRCW
Trigger: CCAGCACCTGAGGTCGGGCAAACTCACAAAATAGAG...TTCTTTAAGGTCCACTTGAGCAATGAATAGAGTATATTGGAGCTTTCCTGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp GTCATGGTAGCTGCTGACCTCAGTTTTGACCGATTTGGCATCAGAAGGCAAATTCTCAGGTCTGCAATGTaGACTCACACATTAATGCTG +
Preference number: 5 (lower is better)
Translates to: VMVAADLSFDRFGIRRQILRSAM*THTLML
Trigger: CAGCATTAATGTGTGAGTCAACATTGCAGACCTGAG...AATTTGCCTTCTGATGCCAAATCGGTCAAAACTGAGGTCAGCAGCTACCATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp GTCTGTAAACACCACCTCACACTGAATACAAAAGCAGCTTCTACCCAGCTCTGGTTGCCGGATTATAATTaGGGTGCGGGAAGTTTTACT +
Preference number: 5 (lower is better)
Translates to: VCKHHLTLNTKAASTQLWLPDYN*GAGSFT
Trigger: AGTAAAACTTCCCGCACCCAAATTATAATCCGGCAA...CCAGAGCTGGGTAGAAGCTGCTTTTGTATTCAGTGTGAGGTGGTGTTTACAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp TGGGAAGGCCTGGCTGCTCTCTGTGGAAAACAGCCCTGGTTTCAAAAACATTACCATGTGTTTGATTGCTaGCAGAACAGGATAAAGGAT +
Preference number: 5 (lower is better)
Translates to: WEGLAALCGKQPWFQKHYHVFDC*QNRIKD
Trigger: ATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG...GTAATGTTTTTGAAACCAGGGCTGTTTTCCACAGAGAGCAGCCAGGCCTTCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTGTGCCTATGGAGCCTTaGCTTCCACTCCCCTTGTAC +
Preference number: 5 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSVPMEP*LPLPLY
Trigger: GTACAAGGGGAGTGGAAGCAAAGGCTCCATAGGCAC...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000676433.1
CDS TCA 90 bp AGGAGCATCAAACCAATACAATGTGTCCAGAATTGTGCTGTATGTTaGACTTTCCTTCTAGAAAGAGACCAGGTGCCACGCCACAGCAAA +
Preference number: 5 (lower is better)
Translates to: RSIKPIQCVQNCAVC*TFLLERDQVPRHSK
Trigger: TTTGCTGTGGCGTGGCACCTGGTCTCTTTCTAGAAGGAAAGTTCAACATACAGCACAATTCTGGACACATTGTATTGGTTTGATGCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255380.8
ENST00000468573.5
ENST00000487470.1
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS TCA 90 bp CATGATGGGGATGGATACAGTTCATTCAATCCACAGTCCTCTGAGTaGCTCATAACCAAAATATGTGCCATTACTGTTCATATCCGCGCC +
Preference number: 5 (lower is better)
Translates to: HDGDGYSSFNPQSSE*LITKICAITVHIRA
Trigger: GGCGCGGATATGAACAGTAATGGCACATATTTTGGTTATGAGTCACTCAGAGGACTGTGGATTGAATGAACTGTATCCATCCCCATCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615928.5
CDS-3UTR CAA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCAGCGATGAAGACCACTaGCCAGACGGTATGACCTCC +
Preference number: 5 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFSDEDH*PDGMTS
Trigger: GGAGGTCATACCGTCTGGCAAGTGGTCTTCATCGCT...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCCTCTTTGTTGTTCGTTaGGCTCGGTACGTGAGCGGC +
Preference number: 5 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFLFVVR*ARYVSG
Trigger: GCCGCTCACGTACCGAGCCAAACGAACAACAAAGAG...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCCACCGGCTCTCTTTGTaGTTCGTTTGGCTCGGTACG +
Preference number: 5 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFHRLSL*FVWLGT
Trigger: CGTACCGAGCCAAACGAACAACAAAGAGAGCCGGTG...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp GACCTAGAGTCTTGGATTTGTTCCTTTTCTGCTATTATTAGCATCACAAAAGGACACCGGCTCTCTTTGTaGTTCGTTTGGCTCGGTACG +
Preference number: 5 (lower is better)
Translates to: DLESWICSFSAIISITKGHRLSL*FVWLGT
Trigger: CGTACCGAGCCAAACGAACAACAAAGAGAGCCGGTG...TCCTTTTGTGATGCTAATAATAGCAGAAAAGGAACAAATCCAAGACTCTAGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTTCACACCGGCTCTCTTaGTTGTTCGTTTGGCTCGGT +
Preference number: 5 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSSHRLS*LFVWLG
Trigger: ACCGAGCCAAACGAACAACAAAGAGAGCCGGTGTGA...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGATCACACCGGCTCTCTTaGTTGTTCGTTTGGCTCGGT +
Preference number: 5 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRSHRLS*LFVWLG
Trigger: ACCGAGCCAAACGAACAACAAAGAGAGCCGGTGTGA...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp GCCACAGGAAAGCTCCAATATACTCTATTCATTGCTCAAGTGGACCTTAAAGAACCATACTTCCTCCTGTaGGAGCGTTTCATGCTTTGC +
Preference number: 5 (lower is better)
Translates to: ATGKLQYTLFIAQVDLKEPYFLL*ERFMLC
Trigger: GCAAAGCATGAAACGCTCCAACAGGAGGAAGTATGG...TTCTTTAAGGTCCACTTGAGCAATGAATAGAGTATATTGGAGCTTTCCTGTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTCTGGGTTTCCAGCTCTaGGTTGTGAACCAGAAGTGG +
Preference number: 5 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSLGFQL*VVNQKW
Trigger: CCACTTCTGGTTCACAACCAAGAGCTGGAAACCCAG...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGACTGGGTTTCCAGCTCTaGGTTGTGAACCAGAAGTGG +
Preference number: 5 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRLGFQL*VVNQKW
Trigger: CCACTTCTGGTTCACAACCAAGAGCTGGAAACCCAG...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp GAGTGGTATTTGAAACCATACTACTCCGGGTTTGCCAACAAATTTCAAAGCTTCGCAGCAGCATCATTGTaGTTCCAACTGTCACTGCTG +
Preference number: 5 (lower is better)
Translates to: EWYLKPYYSGFANKFQSFAAASL*FQLSLL
Trigger: CAGCAGTGACAGTTGGAACAACAATGATGCTGCTGC...GAAGCTTTGAAATTTGTTGGCAAACCCGGAGTAGTATGGTTTCAAATACCACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGATCCGATGAGGGTAACTaGGTGGAGTTGAGGATGGTG +
Preference number: 5 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRSDEGN*VELRMV
Trigger: CACCATCCTCAACTCCACCAAGTTACCCTCATCGGA...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTTCCGATGAGGGTAACTaGGTGGAGTTGAGGATGGTG +
Preference number: 5 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSSDEGN*VELRMV
Trigger: CACCATCCTCAACTCCACCAAGTTACCCTCATCGGA...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp GTCATGGTAGCTGCTGACCTCAGTTTTGACCGATTTGGCATCAGAAGGCAAATTAGATTCCAAAAGGTTTaGGGTATGCAGCTGTCACAA +
Preference number: 5 (lower is better)
Translates to: VMVAADLSFDRFGIRRQIRFQKV*GMQLSQ
Trigger: TTGTGACAGCTGCATACCCAAAACCTTTTGGAATCT...AATTTGCCTTCTGATGCCAAATCGGTCAAAACTGAGGTCAGCAGCTACCATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp GAGTGGTATTTGAAACCATACTACTCCGGGTTTGCCAACAAATTTCAAAGCTTCCCTAAGGTCTGTGGGTaGATGTGTGCGTTTTGTCAC +
Preference number: 5 (lower is better)
Translates to: EWYLKPYYSGFANKFQSFPKVCG*MCAFCH
Trigger: GTGACAAAACGCACACATCAACCCACAGACCTTAGG...GAAGCTTTGAAATTTGTTGGCAAACCCGGAGTAGTATGGTTTCAAATACCACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp GTCTGTAAACACCACCTCACACTGAATACAAAAGCAGCTTCTACCCAGCTCTGGTTTCTTTCTTGTTCTTaGGTTGAATGTGGGCCCAAA +
Preference number: 5 (lower is better)
Translates to: VCKHHLTLNTKAASTQLWFLSCS*VECGPK
Trigger: TTTGGGCCCACATTCAACCAAAGAACAAGAAAGAAA...CCAGAGCTGGGTAGAAGCTGCTTTTGTATTCAGTGTGAGGTGGTGTTTACAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp GTCTGTAAACACCACCTCACACTGAATACAAAAGCAGCTTCTACCCAGCTCTGGGTGTTGTTGCTTAGTTaGAGCAATGAGGATAAAACC +
Preference number: 5 (lower is better)
Translates to: VCKHHLTLNTKAASTQLWVLLLS*SNEDKT
Trigger: GGTTTTATCCTCATTGCTCAAACTAAGCAACAACAC...CCAGAGCTGGGTAGAAGCTGCTTTTGTATTCAGTGTGAGGTGGTGTTTACAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp GCCACAGGAAAGCTCCAATATACTCTATTCATTGCTCAAGTGGACCTTAAAGAAGGGTTGGAGTGGTATTaGAAACCATACTACTCCGGG +
Preference number: 5 (lower is better)
Translates to: ATGKLQYTLFIAQVDLKEGLEWY*KPYYSG
Trigger: CCCGGAGTAGTATGGTTTCAAATACCACTCCAACCC...TTCTTTAAGGTCCACTTGAGCAATGAATAGAGTATATTGGAGCTTTCCTGTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp GTCATGGTAGCTGCTGACCTCAGTTTTGACCGATTTGGCATCAGAAGGCAAATTTTGCCGGATTATAATTaGGGTGCGGGAAGTTTTACT +
Preference number: 5 (lower is better)
Translates to: VMVAADLSFDRFGIRRQILPDYN*GAGSFT
Trigger: AGTAAAACTTCCCGCACCCAAATTATAATCCGGCAA...AATTTGCCTTCTGATGCCAAATCGGTCAAAACTGAGGTCAGCAGCTACCATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS TCA 90 bp ATACTTTCCTCTGTTGTTTCATCAAGGTTTGGGTACGAGAGAAAATaGGGTTCGACGCTCAGTTTCTGTCTCAACAACCATCCGGATTCA +
Preference number: 5 (lower is better)
Translates to: ILSSVVSSRFGYERK*GSTLSFCLNNHPDS
Trigger: TGAATCCGGATGGTTGTTGAGACAGAAACTGAGCGTCGAACCTCATTTTCTCTCGTACCCAAACCTTGATGAAACAACAGAGGAAAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468573.5
CDS TCA 90 bp GTGTCTGGGATGCCGACTATGAATTCTGCTTCATTATGTGGTACTTaGGATTGGGACAGGTTTCAAATACACACGTTGTGTGAGCATCAT +
Preference number: 5 (lower is better)
Translates to: VSGMPTMNSASLCGT*DWDRFQIHTLCEHH
Trigger: ATGATGCTCACACAACGTGTGTATTTGAAACCTGTCCCAATCTCAAGTACCACATAATGAAGCAGAATTCATAGTCGGCATCCCAGACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676433.1
CDS TCA 90 bp CATTTAGGCTTCTCCTTTTTGTCTGTGTGTCTGGGATGCCGACTATaGATTCTGCTTCATTATGTGGTACTTGAGATTGGGACAGGTTTC +
Preference number: 5 (lower is better)
Translates to: HLGFSFLSVCLGCRL*ILLHYVVLEIGTGF
Trigger: GAAACCTGTCCCAATCTCAAGTACCACATAATGAAGCAGAATTCATAGTCGGCATCCCAGACACACAGACAAAAAGGAGAAGCCTAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676433.1
CDS CCA 90 bp CTACAATTGCAGCCCAATACTTTCCTCTGTTGTTTCATCAAGGTTTaGGTACGAGAGAAAATGAGGTTCGACGCTCAGTTTCTGTCTCAA +
Preference number: 5 (lower is better)
Translates to: LQLQPNTFLCCFIKV*VREKMRFDAQFLSQ
Trigger: TTGAGACAGAAACTGAGCGTCGAACCTCATTTTCTCTCGTACCCAAACCTTGATGAAACAACAGAGGAAAGTATTGGGCTGCAATTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468573.5
CDS-3UTR CAA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGGCCAGCAAGCTCTTaGGTACGCTTTTCAGTTTCC +
Preference number: 5 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRRPASS*VRFSVS
Trigger: GGAAACTGAAAAGCGTACCAAAGAGCTTGCTGGCCT...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTCCATACTTCCTCCTGTaGGAGCGTTTCATGCTTTGC +
Preference number: 5 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSPYFLL*ERFMLC
Trigger: GCAAAGCATGAAACGCTCCAACAGGAGGAAGTATGG...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGACCATACTTCCTCCTGTaGGAGCGTTTCATGCTTTGC +
Preference number: 5 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRPYFLL*ERFMLC
Trigger: GCAAAGCATGAAACGCTCCAACAGGAGGAAGTATGG...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAGCAGCAGCATCATTGTaGTTCCAACTGTCACTGCTG +
Preference number: 5 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRAAASL*FQLSLL
Trigger: CAGCAGTGACAGTTGGAACAACAATGATGCTGCTGC...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTGCAGCAGCATCATTGTaGTTCCAACTGTCACTGCTG +
Preference number: 5 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSAAASL*FQLSLL
Trigger: CAGCAGTGACAGTTGGAACAACAATGATGCTGCTGC...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTGAGGCAGCAGCATCATaGTTGTTCCAACTGTCACTG +
Preference number: 5 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSEAAAS*LFQLSL
Trigger: CAGTGACAGTTGGAACAACAATGATGCTGCTGCCTC...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAGAGGCAGCAGCATCATaGTTGTTCCAACTGTCACTG +
Preference number: 5 (lower is better)
Translates to: NRQLLSHLGDKTIFIITREAAAS*LFQLSL
Trigger: CAGTGACAGTTGGAACAACAATGATGCTGCTGCCTC...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCTCCGATGAGGGTAACTaGGTGGAGTTGAGGATGGTG +
Preference number: 5 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFSDEGN*VELRMV
Trigger: CACCATCCTCAACTCCACCAAGTTACCCTCATCGGA...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp GCCACAGGAAAGCTCCAATATACTCTATTCATTGCTCAAGTGGACCTTAAAGAAGCTTGGAGAAGCTTTTaGGAAAACTGCCTCCATCGT +
Preference number: 5 (lower is better)
Translates to: ATGKLQYTLFIAQVDLKEAWRSF*ENCLHR
Trigger: ACGATGGAGGCAGTTTTCCAAAAAGCTTCTCCAAGC...TTCTTTAAGGTCCACTTGAGCAATGAATAGAGTATATTGGAGCTTTCCTGTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp GAGTGGTATTTGAAACCATACTACTCCGGGTTTGCCAACAAATTTCAAAGCTTCTTACCCACTGAGGAGTaGACGTCAGAAGTCTTAGCT +
Preference number: 5 (lower is better)
Translates to: EWYLKPYYSGFANKFQSFLPTEE*TSEVLA
Trigger: AGCTAAGACTTCTGACGTCAACTCCTCAGTGGGTAA...GAAGCTTTGAAATTTGTTGGCAAACCCGGAGTAGTATGGTTTCAAATACCACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGACCTAAGGTCTGTGGGTaGATGTGTGCGTTTTGTCAC +
Preference number: 5 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRPKVCG*MCAFCH
Trigger: GTGACAAAACGCACACATCAACCCACAGACCTTAGG...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp GCCACAGGAAAGCTCCAATATACTCTATTCATTGCTCAAGTGGACCTTAAAGAACCCGATTTAGCTCTGTaGAGACATCAACAAAGGAGG +
Preference number: 5 (lower is better)
Translates to: ATGKLQYTLFIAQVDLKEPDLAL*RHQQRR
Trigger: CCTCCTTTGTTGATGTCTCAACAGAGCTAAATCGGG...TTCTTTAAGGTCCACTTGAGCAATGAATAGAGTATATTGGAGCTTTCCTGTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp GACCTAGAGTCTTGGATTTGTTCCTTTTCTGCTATTATTAGCATCACAAAAGGACTCTATTTTGTGAGTTaGCCCGACCTCAGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: DLESWICSFSAIISITKGLYFVS*PDLRCW
Trigger: CCAGCACCTGAGGTCGGGCAAACTCACAAAATAGAG...TCCTTTTGTGATGCTAATAATAGCAGAAAAGGAACAAATCCAAGACTCTAGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp GTCATGGTAGCTGCTGACCTCAGTTTTGACCGATTTGGCATCAGAAGGCAAATTGAACTGCTAAGCATTTaGGACTCCAAGAAAGAACAA +
Preference number: 5 (lower is better)
Translates to: VMVAADLSFDRFGIRRQIELLSI*DSKKEQ
Trigger: TTGTTCTTTCTTGGAGTCCAAAATGCTTAGCAGTTC...AATTTGCCTTCTGATGCCAAATCGGTCAAAACTGAGGTCAGCAGCTACCATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGATTGCTTCCACTCCCCTaGTACCTGCAGACCTTTCAT +
Preference number: 5 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRLLPLP*YLQTFH
Trigger: ATGAAAGGTCTGCAGGTACAAGGGGAGTGGAAGCAA...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000676433.1
CDS GCA 90 bp GCTTCTCCTTTTTGTCTGTGTGTCTGGGATGCCGACTATGAATTCTaGTTCATTATGTGGTACTTGAGATTGGGACAGGTTTCAAATACA +
Preference number: 5 (lower is better)
Translates to: ASPFCLCVWDADYEF*FIMWYLRLGQVSNT
Trigger: TGTATTTGAAACCTGTCCCAATCTCAAGTACCACATAATGAAGCAGAATTCATAGTCGGCATCCCAGACACACAGACAAAAAGGAGAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676433.1
CDS-3UTR CAA 90 bp GAGTGGTATTTGAAACCATACTACTCCGGGTTTGCCAACAAATTTCAAAGCTTCCTTTCCAACAAAGTATaGCCAGAACAAGATGGCAGG +
Preference number: 5 (lower is better)
Translates to: EWYLKPYYSGFANKFQSFLSNKV*PEQDGR
Trigger: CCTGCCATCTTGTTCTGGCAATACTTTGTTGGAAAG...GAAGCTTTGAAATTTGTTGGCAAACCCGGAGTAGTATGGTTTCAAATACCACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAGCTTGGAGAAGCTTTTaGGAAAACTGCCTCCATCGT +
Preference number: 5 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRAWRSF*ENCLHR
Trigger: ACGATGGAGGCAGTTTTCCAAAAAGCTTCTCCAAGC...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTGCTTGGAGAAGCTTTTaGGAAAACTGCCTCCATCGT +
Preference number: 5 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSAWRSF*ENCLHR
Trigger: ACGATGGAGGCAGTTTTCCAAAAAGCTTCTCCAAGC...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTTTACCCACTGAGGAGTaGACGTCAGAAGTCTTAGCT +
Preference number: 5 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSLPTEE*TSEVLA
Trigger: AGCTAAGACTTCTGACGTCAACTCCTCAGTGGGTAA...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGATTACCCACTGAGGAGTaGACGTCAGAAGTCTTAGCT +
Preference number: 5 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRLPTEE*TSEVLA
Trigger: AGCTAAGACTTCTGACGTCAACTCCTCAGTGGGTAA...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTACCAGAACCATGATGTaGTATGGGGTCCAAGTGATG +
Preference number: 5 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSTRTMM*YGVQVM
Trigger: CATCACTTGGACCCCATACAACATCATGGTTCTGGT...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCCCACTTTTGGGATCCTaGGGAAGAATGTGGGAACTG +
Preference number: 5 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFPLLGS*GRMWEL
Trigger: CAGTTCCCACATTCTTCCCAAGGATCCCAAAAGTGG...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGATCTGGATTCCCACTTTaGGGATCCTTGGGAAGAATG +
Preference number: 5 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRSGFPL*GSLGRM
Trigger: CATTCTTCCCAAGGATCCCAAAAGTGGGAATCCAGA...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp GCCACAGGAAAGCTCCAATATACTCTATTCATTGCTCAAGTGGACCTTAAAGAAAGACAGGAAGCTCTATaGGGACAAGAAGATTCAGCT +
Preference number: 5 (lower is better)
Translates to: ATGKLQYTLFIAQVDLKERQEAL*GQEDSA
Trigger: AGCTGAATCTTCTTGTCCCAATAGAGCTTCCTGTCT...TTCTTTAAGGTCCACTTGAGCAATGAATAGAGTATATTGGAGCTTTCCTGTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp GCCACAGGAAAGCTCCAATATACTCTATTCATTGCTCAAGTGGACCTTAAAGAACAAGCCCTATTTTCTTaGAGAAGGTGCCATTCAGCA +
Preference number: 5 (lower is better)
Translates to: ATGKLQYTLFIAQVDLKEQALFS*RRCHSA
Trigger: TGCTGAATGGCACCTTCTCAAAGAAAATAGGGCTTG...TTCTTTAAGGTCCACTTGAGCAATGAATAGAGTATATTGGAGCTTTCCTGTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp GACCTAGAGTCTTGGATTTGTTCCTTTTCTGCTATTATTAGCATCACAAAAGGACCTGGAGAATGGAGATaGAGTGTGTGTGTGTGTGCT +
Preference number: 5 (lower is better)
Translates to: DLESWICSFSAIISITKGPGEWR*SVCVCA
Trigger: AGCACACACACACACACTCAATCTCCATTCTCCAGG...TCCTTTTGTGATGCTAATAATAGCAGAAAAGGAACAAATCCAAGACTCTAGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCGGTAGGGTCAGAACTTaGTGTGAGTCTCTGTGGTTC +
Preference number: 5 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFGRVRT*CESLWF
Trigger: GAACCACAGAGACTCACACAAAGTTCTGACCCTACC...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp AAAACCAAAGCAAACACCTGCTACCTAGAAACTCTATTTTGTGAGTTTGCCCGATTTACTAATGCTTCTTaGCAGTGGAGAGTATGGCCC +
Preference number: 5 (lower is better)
Translates to: KTKANTCYLETLFCEFARFTNAS*QWRVWP
Trigger: GGGCCATACTCTCCACTGCAAAGAAGCATTAGTAAA...TCGGGCAAACTCACAAAATAGAGTTTCTAGGTAGCAGGTGTTTGCTTTGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp GCCACAGGAAAGCTCCAATATACTCTATTCATTGCTCAAGTGGACCTTAAAGAATACACCCATCTGTTTTaGGACTGCGGTTTCTCTATC +
Preference number: 5 (lower is better)
Translates to: ATGKLQYTLFIAQVDLKEYTHLF*DCGFSI
Trigger: GATAGAGAAACCGCAGTCCAAAAACAGATGGGTGTA...TTCTTTAAGGTCCACTTGAGCAATGAATAGAGTATATTGGAGCTTTCCTGTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp GAGTGGTATTTGAAACCATACTACTCCGGGTTTGCCAACAAATTTCAAAGCTTCTACACCCATCTGTTTTaGGACTGCGGTTTCTCTATC +
Preference number: 5 (lower is better)
Translates to: EWYLKPYYSGFANKFQSFYTHLF*DCGFSI
Trigger: GATAGAGAAACCGCAGTCCAAAAACAGATGGGTGTA...GAAGCTTTGAAATTTGTTGGCAAACCCGGAGTAGTATGGTTTCAAATACCACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTTTAGGCTTCTCCTTTTaGTCTGTGTGTCTGGGATGC +
Preference number: 5 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSLGFSF*SVCLGC
Trigger: GCATCCCAGACACACAGACAAAAAGGAGAAGCCTAA...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000676433.1
CDS-3UTR CAA 90 bp AAAACCAAAGCAAACACCTGCTACCTAGAAACTCTATTTTGTGAGTTTGCCCGAGAGGTTGTACTGTTATaGTGCAAGGTCATTGTGACT +
Preference number: 5 (lower is better)
Translates to: KTKANTCYLETLFCEFAREVVLL*CKVIVT
Trigger: AGTCACAATGACCTTGCACAATAACAGTACAACCTC...TCGGGCAAACTCACAAAATAGAGTTTCTAGGTAGCAGGTGTTTGCTTTGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTGAAACAAAGGCGAGGTaGTACTGTTATTGTGCAAGG +
Preference number: 5 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSETKAR*YCYCAR
Trigger: CCTTGCACAATAACAGTACAACCTCGCCTTTGTTTC...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAGAAACAAAGGCGAGGTaGTACTGTTATTGTGCAAGG +
Preference number: 5 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRETKAR*YCYCAR
Trigger: CCTTGCACAATAACAGTACAACCTCGCCTTTGTTTC...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAACCGTCTTCAGCTGCTaGTTGACCTTAAATGACACA +
Preference number: 5 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRTVFSC*LTLNDT
Trigger: TGTGTCATTTAAGGTCAACAAGCAGCTGAAGACGGT...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTACCGTCTTCAGCTGCTaGTTGACCTTAAATGACACA +
Preference number: 5 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSTVFSC*LTLNDT
Trigger: TGTGTCATTTAAGGTCAACAAGCAGCTGAAGACGGT...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGACTTTCCAACAAAGTATaGCCAGAACAAGATGGCAGG +
Preference number: 5 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRLSNKV*PEQDGR
Trigger: CCTGCCATCTTGTTCTGGCAATACTTTGTTGGAAAG...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTCTTTCCAACAAAGTATaGCCAGAACAAGATGGCAGG +
Preference number: 5 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSLSNKV*PEQDGR
Trigger: CCTGCCATCTTGTTCTGGCAATACTTTGTTGGAAAG...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAGGAGCGTTTCATGCTTaGCTGTTGAAGTTCGTAACT +
Preference number: 5 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRGAFHA*LLKFVT
Trigger: AGTTACGAACTTCAACAGCAAAGCATGAAACGCTCC...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTGGAGCGTTTCATGCTTaGCTGTTGAAGTTCGTAACT +
Preference number: 5 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSGAFHA*LLKFVT
Trigger: AGTTACGAACTTCAACAGCAAAGCATGAAACGCTCC...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCACCAGAACCATGATGTaGTATGGGGTCCAAGTGATG +
Preference number: 5 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFTRTMM*YGVQVM
Trigger: CATCACTTGGACCCCATACAACATCATGGTTCTGGT...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGACACAGCAGCAGCATCTaGAAAGTGGTTCTGAATGTT +
Preference number: 5 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRHSSSI*KVVLNV
Trigger: AACATTCAGAACCACTTTCAAGATGCTGCTGCTGTG...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTCACAGCAGCAGCATCTaGAAAGTGGTTCTGAATGTT +
Preference number: 5 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSHSSSI*KVVLNV
Trigger: AACATTCAGAACCACTTTCAAGATGCTGCTGCTGTG...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp GAGTGGTATTTGAAACCATACTACTCCGGGTTTGCCAACAAATTTCAAAGCTTCAGAGAAGCTTCGGTGTaGTTGCTTAGTTTGAGCAAT +
Preference number: 5 (lower is better)
Translates to: EWYLKPYYSGFANKFQSFREASV*LLSLSN
Trigger: ATTGCTCAAACTAAGCAACAACACCGAAGCTTCTCT...GAAGCTTTGAAATTTGTTGGCAAACCCGGAGTAGTATGGTTTCAAATACCACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTTTTACTAATGCTTCTTaGCAGTGGAGAGTATGGCCC +
Preference number: 5 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSFTNAS*QWRVWP
Trigger: GGGCCATACTCTCCACTGCAAAGAAGCATTAGTAAA...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCAAAGAAAGAAGGGCTTaGCCCAAACTGTGGCCATCA +
Preference number: 5 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFKERRA*PKLWPS
Trigger: TGATGGCCACAGTTTGGGCAAAGCCCTTCTTTCTTT...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS TCA 90 bp AGCGTGCCACTCTTGCTTCATTTCATCCAGGTTTTTCTTGACATCTaGAGAGGCAGTATCTCTAGGGAGTATATTTTTGTATTTCTCCAT +
Preference number: 5 (lower is better)
Translates to: SVPLLLHFIQVFLDI*RGSISREYIFVFLH
Trigger: ATGGAGAAATACAAAAATATACTCCCTAGAGATACTGCCTCTTCAGATGTCAAGAAAAACCTGGATGAAATGAAGCAAGAGTGGCACGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000468573.5
ENST00000675709.1
CDS-3UTR CAA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAGAGGTTGTACTGTTATaGTGCAAGGTCATTGTGACT +
Preference number: 5 (lower is better)
Translates to: NRQLLSHLGDKTIFIITREVVLL*CKVIVT
Trigger: AGTCACAATGACCTTGCACAATAACAGTACAACCTC...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp GACCTAGAGTCTTGGATTTGTTCCTTTTCTGCTATTATTAGCATCACAAAAGGAACCGTCTTCAGCTGCTaGTTGACCTTAAATGACACA +
Preference number: 5 (lower is better)
Translates to: DLESWICSFSAIISITKGTVFSC*LTLNDT
Trigger: TGTGTCATTTAAGGTCAACAAGCAGCTGAAGACGGT...TCCTTTTGTGATGCTAATAATAGCAGAAAAGGAACAAATCCAAGACTCTAGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGATTTCATGCTTTGCTGTaGAAGTTCGTAACTGCTGCA +
Preference number: 5 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRFHALL*KFVTAA
Trigger: TGCAGCAGTTACGAACTTCAACAGCAAAGCATGAAA...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTTTTCATGCTTTGCTGTaGAAGTTCGTAACTGCTGCA +
Preference number: 5 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSFHALL*KFVTAA
Trigger: TGCAGCAGTTACGAACTTCAACAGCAAAGCATGAAA...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTAGATTCCAAAAGGTTTaGGGTATGCAGCTGTCACAA +
Preference number: 5 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSRFQKV*GMQLSQ
Trigger: TTGTGACAGCTGCATACCCAAAACCTTTTGGAATCT...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGATTCCAAAAGGTTTaGGGTATGCAGCTGTCACAA +
Preference number: 5 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRRFQKV*GMQLSQ
Trigger: TTGTGACAGCTGCATACCCAAAACCTTTTGGAATCT...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCAGACAGGAAGCTCTATaGGGACAAGAAGATTCAGCT +
Preference number: 5 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFRQEAL*GQEDSA
Trigger: AGCTGAATCTTCTTGTCCCAATAGAGCTTCCTGTCT...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp GAGTGGTATTTGAAACCATACTACTCCGGGTTTGCCAACAAATTTCAAAGCTTCAGTACACTTCTACTGTaGTCAAAGTCGTCTGTAAAC +
Preference number: 5 (lower is better)
Translates to: EWYLKPYYSGFANKFQSFSTLLL*SKSSVN
Trigger: GTTTACAGACGACTTTGACAACAGTAGAAGTGTACT...GAAGCTTTGAAATTTGTTGGCAAACCCGGAGTAGTATGGTTTCAAATACCACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp GCCACAGGAAAGCTCCAATATACTCTATTCATTGCTCAAGTGGACCTTAAAGAATTTCTTTCTTGTTCTTaGGTTGAATGTGGGCCCAAA +
Preference number: 5 (lower is better)
Translates to: ATGKLQYTLFIAQVDLKEFLSCS*VECGPK
Trigger: TTTGGGCCCACATTCAACCAAAGAACAAGAAAGAAA...TTCTTTAAGGTCCACTTGAGCAATGAATAGAGTATATTGGAGCTTTCCTGTGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp GCCACAGGAAAGCTCCAATATACTCTATTCATTGCTCAAGTGGACCTTAAAGAAATTCTAGCAACGCATTaGGATGACTTCCATATATCC +
Preference number: 5 (lower is better)
Translates to: ATGKLQYTLFIAQVDLKEILATH*DDFHIS
Trigger: GGATATATGGAAGTCATCCAAATGCGTTGCTAGAAT...TTCTTTAAGGTCCACTTGAGCAATGAATAGAGTATATTGGAGCTTTCCTGTGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp AAAACCAAAGCAAACACCTGCTACCTAGAAACTCTATTTTGTGAGTTTGCCCGAGAATTGTGCTGTATGTaGAACTTTCCTTCTAGAAAG +
Preference number: 5 (lower is better)
Translates to: KTKANTCYLETLFCEFARELCCM*NFPSRK
Trigger: CTTTCTAGAAGGAAAGTTCAACATACAGCACAATTC...TCGGGCAAACTCACAAAATAGAGTTTCTAGGTAGCAGGTGTTTGCTTTGGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp GAGTGGTATTTGAAACCATACTACTCCGGGTTTGCCAACAAATTTCAAAGCTTCGAATTGTGCTGTATGTaGAACTTTCCTTCTAGAAAG +
Preference number: 5 (lower is better)
Translates to: EWYLKPYYSGFANKFQSFELCCM*NFPSRK
Trigger: CTTTCTAGAAGGAAAGTTCAACATACAGCACAATTC...GAAGCTTTGAAATTTGTTGGCAAACCCGGAGTAGTATGGTTTCAAATACCACTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTGTCTTCAGCTGCTTGTaGACCTTAAATGACACAATT +
Preference number: 5 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSVFSCL*TLNDTI
Trigger: AATTGTGTCATTTAAGGTCAACAAGCAGCTGAAGAC...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAGTCTTCAGCTGCTTGTaGACCTTAAATGACACAATT +
Preference number: 5 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRVFSCL*TLNDTI
Trigger: AATTGTGTCATTTAAGGTCAACAAGCAGCTGAAGAC...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp GACCTAGAGTCTTGGATTTGTTCCTTTTCTGCTATTATTAGCATCACAAAAGGATTTCATGCTTTGCTGTaGAAGTTCGTAACTGCTGCA +
Preference number: 5 (lower is better)
Translates to: DLESWICSFSAIISITKGFHALL*KFVTAA
Trigger: TGCAGCAGTTACGAACTTCAACAGCAAAGCATGAAA...TCCTTTTGTGATGCTAATAATAGCAGAAAAGGAACAAATCCAAGACTCTAGGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCAGATTCCAAAAGGTTTaGGGTATGCAGCTGTCACAA +
Preference number: 5 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFRFQKV*GMQLSQ
Trigger: TTGTGACAGCTGCATACCCAAAACCTTTTGGAATCT...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp AAAACCAAAGCAAACACCTGCTACCTAGAAACTCTATTTTGTGAGTTTGCCCGAGTTTTGTCACTGCTATaGATACAACCTCATTCTACA +
Preference number: 5 (lower is better)
Translates to: KTKANTCYLETLFCEFARVLSLL*IQPHST
Trigger: TGTAGAATGAGGTTGTATCAATAGCAGTGACAAAAC...TCGGGCAAACTCACAAAATAGAGTTTCTAGGTAGCAGGTGTTTGCTTTGGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp AAAACCAAAGCAAACACCTGCTACCTAGAAACTCTATTTTGTGAGTTTGCCCGACCTAGAGTCTTGGATTaGTTCCTTTTCTGCTATTAT +
Preference number: 5 (lower is better)
Translates to: KTKANTCYLETLFCEFARPRVLD*FLFCYY
Trigger: ATAATAGCAGAAAAGGAACAAATCCAAGACTCTAGG...TCGGGCAAACTCACAAAATAGAGTTTCTAGGTAGCAGGTGTTTGCTTTGGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp GCCACAGGAAAGCTCCAATATACTCTATTCATTGCTCAAGTGGACCTTAAAGAATTGTTGCACGTGGTATaGGAGCAAAATATTCTTTCA +
Preference number: 5 (lower is better)
Translates to: ATGKLQYTLFIAQVDLKELLHVV*EQNILS
Trigger: TGAAAGAATATTTTGCTCCAATACCACGTGCAACAA...TTCTTTAAGGTCCACTTGAGCAATGAATAGAGTATATTGGAGCTTTCCTGTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCGCAGTAAACTTGTCCTaGAACCTATTAAGGGCTAGA +
Preference number: 5 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFAVNLS*NLLRAR
Trigger: TCTAGCCCTTAATAGGTTCAAGGACAAGTTTACTGC...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp GAGTGGTATTTGAAACCATACTACTCCGGGTTTGCCAACAAATTTCAAAGCTTCGAACAGGATAAAGGATaGTCTCCTAATAACTTTCCA +
Preference number: 5 (lower is better)
Translates to: EWYLKPYYSGFANKFQSFEQDKG*SPNNFP
Trigger: TGGAAAGTTATTAGGAGACAATCCTTTATCCTGTTC...GAAGCTTTGAAATTTGTTGGCAAACCCGGAGTAGTATGGTTTCAAATACCACTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAATGTGGTACTTGAGATaGGGACAGGTTTCAAATACA +
Preference number: 5 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRMWYLR*GQVSNT
Trigger: TGTATTTGAAACCTGTCCCAATCTCAAGTACCACAT...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676433.1
CDS-3UTR CAA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGATTCATTATGTGGTACTaGAGATTGGGACAGGTTTCA +
Preference number: 5 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRFIMWY*RLGQVS
Trigger: TGAAACCTGTCCCAATCTCAAGTACCACATAATGAA...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676433.1
CDS GCA 90 bp AAGCAGAGTCCCACCTTCTACCTCATTTTGTCACAAGGTCTCAAGTaGACATCCCATATTATTTCTAATACGGTAATGTTTATGAATCAA +
Preference number: 5 (lower is better)
Translates to: KQSPTFYLILSQGLK*TSHIISNTVMFMNQ
Trigger: TTGATTCATAAACATTACCGTATTAGAAATAATATGGGATGTGCACTTGAGACCTTGTGACAAAATGAGGTAGAAGGTGGGACTCTGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674678.1
CDS-3UTR CAA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAGAATTGTGCTGTATGTaGAACTTTCCTTCTAGAAAG +
Preference number: 5 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRELCCM*NFPSRK
Trigger: CTTTCTAGAAGGAAAGTTCAACATACAGCACAATTC...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp GACCTAGAGTCTTGGATTTGTTCCTTTTCTGCTATTATTAGCATCACAAAAGGAGTCTTCAGCTGCTTGTaGACCTTAAATGACACAATT +
Preference number: 5 (lower is better)
Translates to: DLESWICSFSAIISITKGVFSCL*TLNDTI
Trigger: AATTGTGTCATTTAAGGTCAACAAGCAGCTGAAGAC...TCCTTTTGTGATGCTAATAATAGCAGAAAAGGAACAAATCCAAGACTCTAGGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTGTTTTGTCACTGCTATaGATACAACCTCATTCTACA +
Preference number: 5 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSVLSLL*IQPHST
Trigger: TGTAGAATGAGGTTGTATCAATAGCAGTGACAAAAC...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAGTTTTGTCACTGCTATaGATACAACCTCATTCTACA +
Preference number: 5 (lower is better)
Translates to: NRQLLSHLGDKTIFIITRVLSLL*IQPHST
Trigger: TGTAGAATGAGGTTGTATCAATAGCAGTGACAAAAC...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS-3UTR CAA 90 bp AACAGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAGAAGTACTGGGACACTaGAATAAGCTTTCACATATT +
Preference number: 5 (lower is better)
Translates to: NRQLLSHLGDKTIFIITREVLGH*NKLSHI
Trigger: AATATGTGAAAGCTTATTCAAGTGTCCCAGTACTTC...TCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCTCAGTTTTGACCGATTaGGCATCAGAAGGCAAATTA +
Preference number: 5 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFSVLTD*ASEGKL
Trigger: TAATTTGCCTTCTGATGCCAAATCGGTCAAAACTGA...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp GACCTAGAGTCTTGGATTTGTTCCTTTTCTGCTATTATTAGCATCACAAAAGGATCAGTTTTGACCGATTaGGCATCAGAAGGCAAATTA +
Preference number: 5 (lower is better)
Translates to: DLESWICSFSAIISITKGSVLTD*ASEGKL
Trigger: TAATTTGCCTTCTGATGCCAAATCGGTCAAAACTGA...TCCTTTTGTGATGCTAATAATAGCAGAAAAGGAACAAATCCAAGACTCTAGGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp AGGCAGCTTCTTTCACATCTGGGTGATAAAACCATTTTTATCATCACCAGAAGTTTGTTGCACGTGGTATaGGAGCAAAATATTCTTTCA +
Preference number: 5 (lower is better)
Translates to: RQLLSHLGDKTIFIITRSLLHVV*EQNILS
Trigger: TGAAAGAATATTTTGCTCCAATACCACGTGCAACAA...ACTTCTGGTGATGATAAAAATGGTTTTATCACCCAGATGTGAAAGAAGCTGCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCATTCTAGCAACGCATTaGGATGACTTCCATATATCC +
Preference number: 5 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFILATH*DDFHIS
Trigger: GGATATATGGAAGTCATCCAAATGCGTTGCTAGAAT...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp GACCTAGAGTCTTGGATTTGTTCCTTTTCTGCTATTATTAGCATCACAAAAGGAGAACTGCTAAGCATTTaGGACTCCAAGAAAGAACAA +
Preference number: 5 (lower is better)
Translates to: DLESWICSFSAIISITKGELLSI*DSKKEQ
Trigger: TTGTTCTTTCTTGGAGTCCAAAATGCTTAGCAGTTC...TCCTTTTGTGATGCTAATAATAGCAGAAAAGGAACAAATCCAAGACTCTAGGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS-3UTR CAA 90 bp CATGTGTTTGATTGCTTGCAGAACAGGATAAAGGATTGTCTCCTAATAACTTTCGAAGTACTGGGACACTaGAATAAGCTTTCACATATT +
Preference number: 5 (lower is better)
Translates to: HVFDCLQNRIKDCLLITFEVLGH*NKLSHI
Trigger: AATATGTGAAAGCTTATTCAAGTGTCCCAGTACTTC...GAAAGTTATTAGGAGACAATCCTTTATCCTGTTCTGCAAGCAATCAAACACATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255380.8
ENST00000676153.1
CDS CCA 90 bp AAACTGTTGCAAAGCATAAACTCGGTAAAAAGTTTAAGCTTACATTaGCACCAGATCTATATGATATTGACCAGAAGACATCGAAACTGT +
Preference number: 5 (lower is better)
Translates to: KLLQSINSVKSLSLH*HQIYMILTRRHRNC
Trigger: ACAGTTTCGATGTCTTCTGGTCAATATCATATAGATCTGGTGCCAATGTAAGCTTAAACTTTTTACCGAGTTTATGCTTTGCAACAGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481779.1
CDS CCA 90 bp TGTCTATCATTGCAACGTAGTAAACAGAGTTTGATACCTATTTACTaGCTGAGCTTAATAAAGAGATCACTATATTGCCTCCAAAGATCA +
Preference number: 5 (lower is better)
Translates to: CLSLQRSKQSLIPIY*LSLIKRSLYCLQRS
Trigger: TGATCTTTGGAGGCAATATAGTGATCTCTTTATTAAGCTCAGCCAGTAAATAGGTATCAAACTCTGTTTACTACGTTGCAATGATAGACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674678.1
CDS GCA 72 bp GCACCTGCCCAAGCGGCAGCGCTCCCGGCTCGGCAGTaGCGCCCCCGCGCCCTGTGCTCCCCTGCACGCTCC +
Preference number: 6 (lower is better)
Translates to: APAQAAALPARQ*RPRALCSPARS
Trigger: GGAGCGTGCAGGGGAGCACAGGGCGCGGGGGCGGCACTGCCGAGCCGGGAGCGCTGCCGCTTGGGCAGGTGC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468573.5
ENST00000676153.1
CDS GCA 72 bp CGTCACATGCCGCCTCCGGGCAGCGGCCGCGGCACCTaGCCAAGCGGCAGCGCTCCCGGCTCGGCAGTGCCG +
Preference number: 6 (lower is better)
Translates to: RHMPPPGSGRGT*PSGSAPGSAVP
Trigger: CGGCACTGCCGAGCCGGGAGCGCTGCCGCTTGGGCAGGTGCCGCGGCCGCTGCCCGGAGGCGGCATGTGACG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468573.5
ENST00000676153.1
CDS GCA 72 bp CGCTCCAGGTGGCTGTCCCACGCCGGTCTCCGCGCCTaGCCGGTGCGCGGGTGGCGTCCGCTCCACCTTCCC +
Preference number: 6 (lower is better)
Translates to: RSRWLSHAGLRA*PVRGWRPLHLP
Trigger: GGGAAGGTGGAGCGGACGCCACCCGCGCACCGGGCAGGCGCGGAGACCGGCGTGGGACAGCCACCTGGAGCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000468573.5
ENST00000492335.5
ENST00000674678.1
ENST00000675184.1
ENST00000676153.1
CDS CCA 72 bp TCCCACGCCGGTCTCCGCGCCTGCCCGGTGCGCGGGTaGCGTCCGCTCCACCTTCCCTTCGTCTCCTCCGGC +
Preference number: 6 (lower is better)
Translates to: SHAGLRACPVRG*RPLHLPFVSSG
Trigger: GCCGGAGGAGACGAAGGGAAGGTGGAGCGGACGCCACCCGCGCACCGGGCAGGCGCGGAGACCGGCGTGGGA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000468573.5
ENST00000492335.5
ENST00000674678.1
ENST00000675184.1
ENST00000676153.1
CDS GCA 72 bp GGTGGCTGTCCCACGCCGGTCTCCGCGCCTGCCCGGTaGGCGGGTGGCGTCCGCTCCACCTTCCCTTCGTCT +
Preference number: 6 (lower is better)
Translates to: GGCPTPVSAPAR*AGGVRSTFPSS
Trigger: AGACGAAGGGAAGGTGGAGCGGACGCCACCCGCGCACCGGGCAGGCGCGGAGACCGGCGTGGGACAGCCACC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000468573.5
ENST00000492335.5
ENST00000674678.1
ENST00000675184.1
ENST00000676153.1
CDS GCA 72 bp CGCCCTTCAGTTCATCGCCCGTCTTCCCAGAAGCGCTaGTGCGGCCCCGGCGGACTGATGAGGAGCCTGGAG +
Preference number: 6 (lower is better)
Translates to: RPSVHRPSSQKR*CGPGGLMRSLE
Trigger: CTCCAGGCTCCTCATCAGTCCGCCGGGGCCGCAGCAGCGCTTCTGGGAAGACGGGCGATGAACTGAAGGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000468573.5
ENST00000492335.5
ENST00000674678.1
ENST00000675184.1
ENST00000676153.1
CDS CCA 72 bp CAGCAAAGTCCTTCTTTCTGGCAGCTGCGCTCCAGGTaGCTGTCCCACGCCGGTCTCCGCGCCTGCCCGGTG +
Preference number: 6 (lower is better)
Translates to: QQSPSFWQLRSR*LSHAGLRACPV
Trigger: CACCGGGCAGGCGCGGAGACCGGCGTGGGACAGCCACCTGGAGCGCAGCTGCCAGAAAGAAGGACTTTGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000468573.5
ENST00000492335.5
ENST00000674678.1
ENST00000675184.1
ENST00000676153.1
CDS GCA 72 bp GGCTCCGCGTTCAGGGAGCGACTGTCCTTAAGATCGTaGCCCCCTGCCCGGAGCCGCCCTTCAGTTCATCGC +
Preference number: 6 (lower is better)
Translates to: GSAFRERLSLRS*PPARSRPSVHR
Trigger: GCGATGAACTGAAGGGCGGCTCCGGGCAGGGGGGCACGATCTTAAGGACAGTCGCTCCCTGAACGCGGAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000468573.5
ENST00000492335.5
ENST00000674678.1
ENST00000675184.1
ENST00000676153.1
CDS GCA 72 bp CCTTCAGTTCATCGCCCGTCTTCCCAGAAGCGCTGCTaGGGCCCCGGCGGACTGATGAGGAGCCTGGAGATC +
Preference number: 6 (lower is better)
Translates to: PSVHRPSSQKRC*GPGGLMRSLEI
Trigger: GATCTCCAGGCTCCTCATCAGTCCGCCGGGGCCGCAGCAGCGCTTCTGGGAAGACGGGCGATGAACTGAAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000468573.5
ENST00000492335.5
ENST00000674678.1
ENST00000675184.1
ENST00000676153.1
CDS GCA 72 bp CTGGCCCAAAGCAGCAAAGTCCTTCTTTCTGGCAGCTaGGCTCCAGGTGGCTGTCCCACGCCGGTCTCCGCG +
Preference number: 6 (lower is better)
Translates to: LAQSSKVLLSGS*APGGCPTPVSA
Trigger: CGCGGAGACCGGCGTGGGACAGCCACCTGGAGCGCAGCTGCCAGAAAGAAGGACTTTGCTGCTTTGGGCCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000468573.5
ENST00000492335.5
ENST00000674678.1
ENST00000675184.1
ENST00000676153.1
CDS GCA 72 bp GCTGCCGAAATGAGTGACGGTTCCCGGGGGCAGCCCTaGATCGGAGGGGCTGTGTATCCAGGAGGAGCTGAT +
Preference number: 6 (lower is better)
Translates to: AAEMSDGSRGQP*IGGAVYPGGAD
Trigger: ATCAGCTCCTCCTGGATACACAGCCCCTCCGATGCAGGGCTGCCCCCGGGAACCGTCACTCATTTCGGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000255380.8
ENST00000448020.1
ENST00000615928.5
ENST00000675184.1
ENST00000675709.1
ENST00000676153.1
ENST00000676433.1
CDS TCA 72 bp CAGCTGCTCGAGAAACATTGTAGCTGCCGAAATGAGTaGCGGTTCCCGGGGGCAGCCCTGCATCGGAGGGGC +
Preference number: 6 (lower is better)
Translates to: QLLEKHCSCRNE*RFPGAALHRRG
Trigger: GCCCCTCCGATGCAGGGCTGCCCCCGGGAACCGTCACTCATTTCGGCAGCTACAATGTTTCTCGAGCAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000255380.8
ENST00000448020.1
ENST00000615928.5
ENST00000675184.1
ENST00000675709.1
ENST00000676153.1
ENST00000676433.1
CDS CAA 90 bp TTTGGAAAACTGCCTCCATCGTCCACGCTCTTCTGGGCCTGCAGCTaGTCGGCTTTCCTCTCCAAGTCCACCATCCCCAGCTCCTCCTCA +
Preference number: 6 (lower is better)
Translates to: FGKLPPSSTLFWACS*SAFLSKSTIPSSSS
Trigger: TGAGGAGGAGCTGGGGATGGTGGACTTGGAGAGGAAAGCCGACAAGCTGCAGGCCCAGAAGAGCGTGGACGATGGAGGCAGTTTTCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS TCA 72 bp TCTACAAGGCCTGCTCGGGTGCGCGCTTGTGAAAAATaGCCGACTGTCTCTGCTGGTACTGCTGCTTGCGCC +
Preference number: 6 (lower is better)
Translates to: STRPARVRACEK*PTVSAGTAACA
Trigger: GGCGCAAGCAGCAGTACCAGCAGAGACAGTCGGTCATTTTTCACAAGCGCGCACCCGAGCAGGCCTTGTAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS GCA 72 bp GGAAAACTGCCTCCATCGTCCACGCTCTTCTGGGCCTaGAGCTTGTCGGCTTTCCTCTCCAAGTCCACCATC +
Preference number: 6 (lower is better)
Translates to: GKLPPSSTLFWA*SLSAFLSKSTI
Trigger: GATGGTGGACTTGGAGAGGAAAGCCGACAAGCTGCAGGCCCAGAAGAGCGTGGACGATGGAGGCAGTTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS CCA 72 bp CTTGCCAGACGGTATGACCTCCCAGAGGGTCATCGGTaGTACCGTCTGGAGAGGAGAAATTGCCAGCTGCTC +
Preference number: 6 (lower is better)
Translates to: LARRYDLPEGHR*YRLERRNCQLL
Trigger: GAGCAGCTGGCAATTTCTCCTCTCCAGACGGTACCACCGATGACCCTCTGGGAGGTCATACCGTCTGGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255380.8
ENST00000448020.1
ENST00000615928.5
ENST00000675184.1
ENST00000675709.1
ENST00000676153.1
ENST00000676433.1
CDS CAA 90 bp CTGCTGTGGTCTTGGTCCATCTGCTCGGAGCTGGGTTTCCAGCTCTaGGTTGTGAACCAGAAGTGGCAGCGGCCATACTTCCTCCTGTTG +
Preference number: 6 (lower is better)
Translates to: LLWSWSICSELGFQL*VVNQKWQRPYFLLL
Trigger: CAACAGGAGGAAGTATGGCCGCTGCCACTTCTGGTTCACAACCAAGAGCTGGAAACCCAGCTCCGAGCAGATGGACCAAGACCACAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS TCA 72 bp CCATCTGCTCGGAGCTGGGTTTCCAGCTCTTGGTTGTaGACCAGAAGTGGCAGCGGCCATACTTCCTCCTGT +
Preference number: 6 (lower is better)
Translates to: PSARSWVSSSWL*TRSGSGHTSSC
Trigger: ACAGGAGGAAGTATGGCCGCTGCCACTTCTGGTTCACAACCAAGAGCTGGAAACCCAGCTCCGAGCAGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS GCA 72 bp GGGAGGCAGCAGCATCATTGTTGTTCCAACTGTCACTaGTGCTGTGGTCTTGGTCCATCTGCTCGGAGCTGG +
Preference number: 6 (lower is better)
Translates to: GRQQHHCCSNCH*CCGLGPSARSW
Trigger: CCAGCTCCGAGCAGATGGACCAAGACCACAGCAGCAGTGACAGTTGGAACAACAATGATGCTGCTGCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS CAA 90 bp GCAGCGGCCATACTTCCTCCTGTTGGAGCGTTTCATGCTTTGCTGTaGAAGTTCGTAACTGCTGCAGCTTCGAGAACTGCCCGTGGGGTG +
Preference number: 6 (lower is better)
Translates to: AAAILPPVGAFHALL*KFVTAAASRTARGV
Trigger: CACCCCACGGGCAGTTCTCGAAGCTGCAGCAGTTACGAACTTCAACAGCAAAGCATGAAACGCTCCAACAGGAGGAAGTATGGCCGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS CAA 90 bp TGTCCACGGCTGACTCTAGCTGGATGGGAAGCTTGGAGAAGCTTTTaGGAAAACTGCCTCCATCGTCCACGCTCTTCTGGGCCTGCAGCT +
Preference number: 6 (lower is better)
Translates to: CPRLTLAGWEAWRSF*ENCLHRPRSSGPAA
Trigger: AGCTGCAGGCCCAGAAGAGCGTGGACGATGGAGGCAGTTTTCCAAAAAGCTTCTCCAAGCTTCCCATCCAGCTAGAGTCAGCCGTGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS TCA 72 bp TGGTCACCAAGGCCAGGATGCCCGTTAAGAAAGCGATaGAGACCACTTGCCAGACGGTATGACCTCCCAGAG +
Preference number: 6 (lower is better)
Translates to: WSPRPGCPLRKR*RPLARRYDLPE
Trigger: CTCTGGGAGGTCATACCGTCTGGCAAGTGGTCTTCATCGCTTTCTTAACGGGCATCCTGGCCTTGGTGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255380.8
ENST00000448020.1
ENST00000615928.5
ENST00000675184.1
ENST00000675709.1
ENST00000676153.1
ENST00000676433.1
CDS GCA 72 bp GCTGGATGGGAAGCTTGGAGAAGCTTTTTGGAAAACTaGCTCCATCGTCCACGCTCTTCTGGGCCTGCAGCT +
Preference number: 6 (lower is better)
Translates to: AGWEAWRSFLEN*LHRPRSSGPAA
Trigger: AGCTGCAGGCCCAGAAGAGCGTGGACGATGGAGGCAGTTTTCCAAAAAGCTTCTCCAAGCTTCCCATCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS CCA 72 bp GAGCTGGGTTTCCAGCTCTTGGTTGTGAACCAGAAGTaGCAGCGGCCATACTTCCTCCTGTTGGAGCGTTTC +
Preference number: 6 (lower is better)
Translates to: ELGFQLLVVNQK*QRPYFLLLERF
Trigger: GAAACGCTCCAACAGGAGGAAGTATGGCCGCTGCCACTTCTGGTTCACAACCAAGAGCTGGAAACCCAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS CCA 72 bp CTTTTTGGAAAACTGCCTCCATCGTCCACGCTCTTCTaGGCCTGCAGCTTGTCGGCTTTCCTCTCCAAGTCC +
Preference number: 6 (lower is better)
Translates to: LFGKLPPSSTLF*ACSLSAFLSKS
Trigger: GGACTTGGAGAGGAAAGCCGACAAGCTGCAGGCCCAGAAGAGCGTGGACGATGGAGGCAGTTTTCCAAAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS CAA 72 bp TCTTGGTCCATCTGCTCGGAGCTGGGTTTCCAGCTCTaGGTTGTGAACCAGAAGTGGCAGCGGCCATACTTC +
Preference number: 6 (lower is better)
Translates to: SWSICSELGFQL*VVNQKWQRPYF
Trigger: GAAGTATGGCCGCTGCCACTTCTGGTTCACAACCAAGAGCTGGAAACCCAGCTCCGAGCAGATGGACCAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS CAA 72 bp AGAGGTAGAGTGGCCGTGCTCTTACCCACTGAGGAGTaGACGTCAGAAGTCTTAGCTGTGTCCACGGCTGAC +
Preference number: 6 (lower is better)
Translates to: RGRVAVLLPTEE*TSEVLAVSTAD
Trigger: GTCAGCCGTGGACACAGCTAAGACTTCTGACGTCAACTCCTCAGTGGGTAAGAGCACGGCCACTCTACCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS CAA 72 bp GTCTTCAGAGCAAACCTCTTGGCCAGAGTGGCTTCCTaGAAGGACAGAGGTAGAGTGGCCGTGCTCTTACCC +
Preference number: 6 (lower is better)
Translates to: VFRANLLARVAS*KDRGRVAVLLP
Trigger: GGGTAAGAGCACGGCCACTCTACCTCTGTCCTTCAAGGAAGCCACTCTGGCCAAGAGGTTTGCTCTGAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS CAA 90 bp TTGAAGGACAGAGGTAGAGTGGCCGTGCTCTTACCCACTGAGGAGTaGACGTCAGAAGTCTTAGCTGTGTCCACGGCTGACTCTAGCTGG +
Preference number: 6 (lower is better)
Translates to: LKDRGRVAVLLPTEE*TSEVLAVSTADSSW
Trigger: CCAGCTAGAGTCAGCCGTGGACACAGCTAAGACTTCTGACGTCAACTCCTCAGTGGGTAAGAGCACGGCCACTCTACCTCTGTCCTTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS TCA 72 bp GTTAAGAAAGCGATGAAGACCACTTGCCAGACGGTATaGCCTCCCAGAGGGTCATCGGTGGTACCGTCTGGA +
Preference number: 6 (lower is better)
Translates to: VKKAMKTTCQTV*PPRGSSVVPSG
Trigger: TCCAGACGGTACCACCGATGACCCTCTGGGAGGTCATACCGTCTGGCAAGTGGTCTTCATCGCTTTCTTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255380.8
ENST00000448020.1
ENST00000615928.5
ENST00000675184.1
ENST00000675709.1
ENST00000676153.1
ENST00000676433.1
CDS CCA 72 bp CCTTTCCGAGTCAAAGAAAGGGGTGACGGAAGCACCTaGAAAATCGGGTCACTCCCACCCGAATATTGCGCT +
Preference number: 6 (lower is better)
Translates to: PFRVKERGDGST*KIGSLPPEYCA
Trigger: AGCGCAATATTCGGGTGGGAGTGACCCGATTTTCCAGGTGCTTCCGTCACCCCTTTCTTTGACTCGGAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255380.8
CDS CCA 72 bp GGTATGACCTCCCAGAGGGTCATCGGTGGTACCGTCTaGAGAGGAGAAATTGCCAGCTGCTCGAGAAACATT +
Preference number: 6 (lower is better)
Translates to: GMTSQRVIGGTV*RGEIASCSRNI
Trigger: AATGTTTCTCGAGCAGCTGGCAATTTCTCCTCTCCAGACGGTACCACCGATGACCCTCTGGGAGGTCATACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255380.8
ENST00000448020.1
ENST00000615928.5
ENST00000675184.1
ENST00000675709.1
ENST00000676153.1
ENST00000676433.1
CDS CAA 72 bp AGACCGATCATCACACCGGCTCTCTTTGTTGTTCGTTaGGCTCGGTACGTGAGCGGCCTCGTGATGGAAAAG +
Preference number: 6 (lower is better)
Translates to: RPIITPALFVVR*ARYVSGLVMEK
Trigger: CTTTTCCATCACGAGGCCGCTCACGTACCGAGCCAAACGAACAACAAAGAGAGCCGGTGTGATGATCGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS CAA 90 bp GAAGTGGCAGCGGCCATACTTCCTCCTGTTGGAGCGTTTCATGCTTaGCTGTTGAAGTTCGTAACTGCTGCAGCTTCGAGAACTGCCCGT +
Preference number: 6 (lower is better)
Translates to: EVAAAILPPVGAFHA*LLKFVTAAASRTAR
Trigger: ACGGGCAGTTCTCGAAGCTGCAGCAGTTACGAACTTCAACAGCAAAGCATGAAACGCTCCAACAGGAGGAAGTATGGCCGCTGCCACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS CAA 90 bp GGCAGCAGCATCATTGTTGTTCCAACTGTCACTGCTGCTGTGGTCTaGGTCCATCTGCTCGGAGCTGGGTTTCCAGCTCTTGGTTGTGAA +
Preference number: 6 (lower is better)
Translates to: GSSIIVVPTVTAAVV*VHLLGAGFPALGCE
Trigger: TTCACAACCAAGAGCTGGAAACCCAGCTCCGAGCAGATGGACCAAGACCACAGCAGCAGTGACAGTTGGAACAACAATGATGCTGCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS CAA 90 bp TTGGAAACCCTCAGTGCACATAACCCAAAGCAGTATCACTGGTCTTaGGCACCTCCTCCTCCCAAGGGGACTCTTCCTTGGTCGGTCATC +
Preference number: 6 (lower is better)
Translates to: LETLSAHNPKQYHWS*APPPPKGTLPWSVI
Trigger: GATGACCGACCAAGGAAGAGTCCCCTTGGGAGGAGGAGGTGCCAAAGACCAGTGATACTGCTTTGGGTTATGTGCACTGAGGGTTTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468573.5
CDS TCA 72 bp GCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTaGGGTACCGGGTTCATCTCACTAGGGAGTGCTAGA +
Preference number: 6 (lower is better)
Translates to: ATQKTGDFCISI*GTGFISLGSAR
Trigger: TCTAGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCCGTCTTCTGCGTCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255380.8
CDS GCA 72 bp GAGGGTCATCGGTGGTACCGTCTGGAGAGGAGAAATTaGCAGCTGCTCGAGAAACATTGTAGCTGCCGAAAT +
Preference number: 6 (lower is better)
Translates to: EGHRWYRLERRN*QLLEKHCSCRN
Trigger: ATTTCGGCAGCTACAATGTTTCTCGAGCAGCTGGCAATTTCTCCTCTCCAGACGGTACCACCGATGACCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255380.8
ENST00000448020.1
ENST00000615928.5
ENST00000675184.1
ENST00000675709.1
ENST00000676153.1
ENST00000676433.1
CDS GCA 72 bp GCTGTTGAAGTTCGTAACTGCTGCAGCTTCGAGAACTaGCCGTGGGGTGGACAAAGTTTTCTGTCTCTGCCT +
Preference number: 6 (lower is better)
Translates to: AVEVRNCCSFEN*PWGGQSFLSLP
Trigger: AGGCAGAGACAGAAAACTTTGTCCACCCCACGGGCAGTTCTCGAAGCTGCAGCAGTTACGAACTTCAACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS GCA 72 bp TGGAGCGTTTCATGCTTTGCTGTTGAAGTTCGTAACTaGTGCAGCTTCGAGAACTGCCCGTGGGGTGGACAA +
Preference number: 6 (lower is better)
Translates to: WSVSCFAVEVRN*CSFENCPWGGQ
Trigger: TTGTCCACCCCACGGGCAGTTCTCGAAGCTGCAGCAGTTACGAACTTCAACAGCAAAGCATGAAACGCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS GCA 72 bp GGCAGCGGCCATACTTCCTCCTGTTGGAGCGTTTCATaGTTTGCTGTTGAAGTTCGTAACTGCTGCAGCTTC +
Preference number: 6 (lower is better)
Translates to: GSGHTSSCWSVS*FAVEVRNCCSF
Trigger: GAAGCTGCAGCAGTTACGAACTTCAACAGCAAAGCATGAAACGCTCCAACAGGAGGAAGTATGGCCGCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS CCA 72 bp TCATTGTTGTTCCAACTGTCACTGCTGCTGTGGTCTTaGTCCATCTGCTCGGAGCTGGGTTTCCAGCTCTTG +
Preference number: 6 (lower is better)
Translates to: SLLFQLSLLLWS*SICSELGFQLL
Trigger: CAAGAGCTGGAAACCCAGCTCCGAGCAGATGGACCAAGACCACAGCAGCAGTGACAGTTGGAACAACAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS CCA 72 bp CTGTGTCCACGGCTGACTCTAGCTGGATGGGAAGCTTaGAGAAGCTTTTTGGAAAACTGCCTCCATCGTCCA +
Preference number: 6 (lower is better)
Translates to: LCPRLTLAGWEA*RSFLENCLHRP
Trigger: TGGACGATGGAGGCAGTTTTCCAAAAAGCTTCTCCAAGCTTCCCATCCAGCTAGAGTCAGCCGTGGACACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS CCA 72 bp AGCAATGGACTGGGTAGGTTCCCTCTGCCAGGGCAATaGTTTACACCTAAGTTCAGATCCTGGCCCAAAGCA +
Preference number: 6 (lower is better)
Translates to: SNGLGRFPLPGQ*FTPKFRSWPKA
Trigger: TGCTTTGGGCCAGGATCTGAACTTAGGTGTAAACCATTGCCCTGGCAGAGGGAACCTACCCAGTCCATTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000468573.5
ENST00000481779.1
ENST00000492335.5
ENST00000674678.1
ENST00000675184.1
ENST00000676153.1
CDS CCA 72 bp TCTTTGGCACCTCCTCCTCCCAAGGGGACTCTTCCTTaGTCGGTCATCCATGACTCAAGGTTTGCTTTTGTG +
Preference number: 6 (lower is better)
Translates to: SLAPPPPKGTLP*SVIHDSRFAFV
Trigger: CACAAAAGCAAACCTTGAGTCATGGATGACCGACCAAGGAAGAGTCCCCTTGGGAGGAGGAGGTGCCAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468573.5
CDS CAA 72 bp AAGCACCTGGAAAATCGGGTCACTCCCACCCGAATATaGCGCTTTTCAGACCAGCTTAAGAAACGGCGCACC +
Preference number: 6 (lower is better)
Translates to: KHLENRVTPTRI*RFSDQLKKRRT
Trigger: GGTGCGCCGTTTCTTAAGCTGGTCTGAAAAGCGCAATATTCGGGTGGGAGTGACCCGATTTTCCAGGTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255380.8
CDS CAA 72 bp CTGCTTCTGCCCCATTCCTGTTTTAGCAAGTCCTCATaGTTCTGGTGTCTGAGCCCTGCCTCTGAAGCAGAG +
Preference number: 6 (lower is better)
Translates to: LLLPHSCFSKSS*FWCLSPASEAE
Trigger: CTCTGCTTCAGAGGCAGGGCTCAGACACCAGAACAATGAGGACTTGCTAAAACAGGAATGGGGCAGAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674678.1
CDS TCA 72 bp TCCTCCCAAGGGGACTCTTCCTTGGTCGGTCATCCATaGCTCAAGGTTTGCTTTTGTGCGCCTACAATTGCA +
Preference number: 6 (lower is better)
Translates to: SSQGDSSLVGHP*LKVCFCAPTIA
Trigger: TGCAATTGTAGGCGCACAAAAGCAAACCTTGAGTCATGGATGACCGACCAAGGAAGAGTCCCCTTGGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468573.5
CDS TCA 72 bp CAAGTCCTCATTGTTCTGGTGTCTGAGCCCTGCCTCTaGAGCAGAGTCCCACCTTCTACCTCATTTTGTCAC +
Preference number: 6 (lower is better)
Translates to: QVLIVLVSEPCL*SRVPPSTSFCH
Trigger: GTGACAAAATGAGGTAGAAGGTGGGACTCTGCTTCAGAGGCAGGGCTCAGACACCAGAACAATGAGGACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674678.1
CDS TCA 72 bp GCAGGACAGGTGAGCTCCACCTTGGTGCTTAGCACATaGGGGTTTTTGGCTTCACCCAGGAAAGAATTCAAG +
Preference number: 6 (lower is better)
Translates to: AGQVSSTLVLST*GFLASPRKEFK
Trigger: CTTGAATTCTTTCCTGGGTGAAGCCAAAAACCCTCATGTGCTAAGCACCAAGGTGGAGCTCACCTGTCCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674678.1
CDS GCA 72 bp ATCGGTGGTACCGTCTGGAGAGGAGAAATTGCCAGCTaGTCGAGAAACATTGTAGCTGCCGAAATGAGTGAC +
Preference number: 6 (lower is better)
Translates to: IGGTVWRGEIAS*SRNIVAAEMSD
Trigger: GTCACTCATTTCGGCAGCTACAATGTTTCTCGAGCAGCTGGCAATTTCTCCTCTCCAGACGGTACCACCGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255380.8
ENST00000448020.1
ENST00000615928.5
ENST00000675184.1
ENST00000675709.1
ENST00000676153.1
ENST00000676433.1
CDS GCA 72 bp TCTGGCTTAACGAACAAACAGCTGGACTCTCTTCTCTaGTTCCGCACTCTGCGTACTACAATACTGCCCCTC +
Preference number: 6 (lower is better)
Translates to: SGLTNKQLDSLL*FRTLRTTILPL
Trigger: GAGGGGCAGTATTGTAGTACGCAGAGTGCGGAAGCAGAGAAGAGAGTCCAGCTGTTTGTTCGTTAAGCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492335.5
CDS CAA 72 bp GCGGCCATACTTCCTCCTGTTGGAGCGTTTCATGCTTaGCTGTTGAAGTTCGTAACTGCTGCAGCTTCGAGA +
Preference number: 6 (lower is better)
Translates to: AAILPPVGAFHA*LLKFVTAAASR
Trigger: TCTCGAAGCTGCAGCAGTTACGAACTTCAACAGCAAAGCATGAAACGCTCCAACAGGAGGAAGTATGGCCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS CAA 90 bp CTCCCAAGGGGACTCTTCCTTGGTCGGTCATCCATGACTCAAGGTTaGCTTTTGTGCGCCTACAATTGCAGCCCAATACTTTCCTCTGTT +
Preference number: 6 (lower is better)
Translates to: LPRGLFLGRSSMTQG*LLCAYNCSPILSSV
Trigger: AACAGAGGAAAGTATTGGGCTGCAATTGTAGGCGCACAAAAGCAAACCTTGAGTCATGGATGACCGACCAAGGAAGAGTCCCCTTGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468573.5
CDS TCA 72 bp TCCTTGACCAGGGACATCCTTTTCCGCTTAGTGATCTaGCTTCTGGTCTTCAGAGCAAACCTCTTGGCCAGA +
Preference number: 6 (lower is better)
Translates to: SLTRDILFRLVI*LLVFRANLLAR
Trigger: TCTGGCCAAGAGGTTTGCTCTGAAGACCAGAAGTCAGATCACTAAGCGGAAAAGGATGTCCCTGGTCAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS TCA 72 bp GTCTGTGGGTTGATGTGTGCGTTTTGTCACTGCTATTaGTACAACCTCATTCTACAAGGCCTGCTCGGGTGC +
Preference number: 6 (lower is better)
Translates to: VCGLMCAFCHCY*YNLILQGLLGC
Trigger: GCACCCGAGCAGGCCTTGTAGAATGAGGTTGTATCAATAGCAGTGACAAAACGCACACATCAACCCACAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS TCA 72 bp ATTCCTGTTTTAGCAAGTCCTCATTGTTCTGGTGTCTaGGCCCTGCCTCTGAAGCAGAGTCCCACCTTCTAC +
Preference number: 6 (lower is better)
Translates to: IPVLASPHCSGV*ALPLKQSPTFY
Trigger: GTAGAAGGTGGGACTCTGCTTCAGAGGCAGGGCTCAGACACCAGAACAATGAGGACTTGCTAAAACAGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674678.1
CDS CAA 72 bp GGTCTGTGGGTTGATGTGTGCGTTTTGTCACTGCTATaGATACAACCTCATTCTACAAGGCCTGCTCGGGTG +
Preference number: 6 (lower is better)
Translates to: GLWVDVCVLSLL*IQPHSTRPARV
Trigger: CACCCGAGCAGGCCTTGTAGAATGAGGTTGTATCAATAGCAGTGACAAAACGCACACATCAACCCACAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS TCA 72 bp GCTTCCGCACTCTGCGTACTACAATACTGCCCCTCATaGATCCTCTGGTCAAGTACACTGTACATAGTGAAG +
Preference number: 6 (lower is better)
Translates to: ASALCVLQYCPS*ILWSSTLYIVK
Trigger: CTTCACTATGTACAGTGTACTTGACCAGAGGATTCATGAGGGGCAGTATTGTAGTACGCAGAGTGCGGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492335.5
CDS CAA 72 bp ATACTTCCTCCTGTTGGAGCGTTTCATGCTTTGCTGTaGAAGTTCGTAACTGCTGCAGCTTCGAGAACTGCC +
Preference number: 6 (lower is better)
Translates to: ILPPVGAFHALL*KFVTAAASRTA
Trigger: GGCAGTTCTCGAAGCTGCAGCAGTTACGAACTTCAACAGCAAAGCATGAAACGCTCCAACAGGAGGAAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000676153.1
ENST00000676433.1
CDS CAA 72 bp GGACTCTTCCTTGGTCGGTCATCCATGACTCAAGGTTaGCTTTTGTGCGCCTACAATTGCAGCCCAATACTT +
Preference number: 6 (lower is better)
Translates to: GLFLGRSSMTQG*LLCAYNCSPIL
Trigger: AAGTATTGGGCTGCAATTGTAGGCGCACAAAAGCAAACCTTGAGTCATGGATGACCGACCAAGGAAGAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468573.5
CDS CAA 90 bp AGGGGACTCTTCCTTGGTCGGTCATCCATGACTCAAGGTTTGCTTTaGTGCGCCTACAATTGCAGCCCAATACTTTCCTCTGTTGTTTCA +
Preference number: 6 (lower is better)
Translates to: RGLFLGRSSMTQGLL*CAYNCSPILSSVVS
Trigger: TGAAACAACAGAGGAAAGTATTGGGCTGCAATTGTAGGCGCACAAAAGCAAACCTTGAGTCATGGATGACCGACCAAGGAAGAGTCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468573.5
CDS GCA 72 bp CTTGGTCGGTCATCCATGACTCAAGGTTTGCTTTTGTaGGCCTACAATTGCAGCCCAATACTTTCCTCTGTT +
Preference number: 6 (lower is better)
Translates to: LGRSSMTQGLLL*AYNCSPILSSV
Trigger: AACAGAGGAAAGTATTGGGCTGCAATTGTAGGCGCACAAAAGCAAACCTTGAGTCATGGATGACCGACCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468573.5
CDS CCA 72 bp CTGCCAGGGCAATGGTTTACACCTAAGTTCAGATCCTaGCCCAAAGCAGCAAAGTCCTTCTTTAATTATGGC +
Preference number: 6 (lower is better)
Translates to: LPGQWFTPKFRS*PKAAKSFFNYG
Trigger: GCCATAATTAAAGAAGGACTTTGCTGCTTTGGGCCAGGATCTGAACTTAGGTGTAAACCATTGCCCTGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481779.1
CDS CAA 72 bp TTCCTTGGTCGGTCATCCATGACTCAAGGTTTGCTTTaGTGCGCCTACAATTGCAGCCCAATACTTTCCTCT +
Preference number: 6 (lower is better)
Translates to: FLGRSSMTQGLL*CAYNCSPILSS
Trigger: AGAGGAAAGTATTGGGCTGCAATTGTAGGCGCACAAAAGCAAACCTTGAGTCATGGATGACCGACCAAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468573.5
CDS CAA 90 bp GTTTGCTTTTGTGCGCCTACAATTGCAGCCCAATACTTTCCTCTGTaGTTTCATCAAGGTTTGGGTACGAGAGAAAATGAGGTTCGACGC +
Preference number: 6 (lower is better)
Translates to: VCFCAPTIAAQYFPL*FHQGLGTRENEVRR
Trigger: GCGTCGAACCTCATTTTCTCTCGTACCCAAACCTTGATGAAACAACAGAGGAAAGTATTGGGCTGCAATTGTAGGCGCACAAAAGCAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468573.5
CDS CAA 90 bp TGGTCGGTCATCCATGACTCAAGGTTTGCTTTTGTGCGCCTACAATaGCAGCCCAATACTTTCCTCTGTTGTTTCATCAAGGTTTGGGTA +
Preference number: 6 (lower is better)
Translates to: WSVIHDSRFAFVRLQ*QPNTFLCCFIKVWV
Trigger: TACCCAAACCTTGATGAAACAACAGAGGAAAGTATTGGGCTGCAATTGTAGGCGCACAAAAGCAAACCTTGAGTCATGGATGACCGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468573.5
CDS TCA 72 bp CACCTAAGTGTTAATGTTTGGTTCTGTGGGTGGCCTTaGATTTGTAACTTTGCAGCGTGCCACTCTTGCTTC +
Preference number: 6 (lower is better)
Translates to: HLSVNVWFCGWP*ICNFAACHSCF
Trigger: GAAGCAAGAGTGGCACGCTGCAAAGTTACAAATTCAAGGCCACCCACAGAACCAAACATTAACACTTAGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468573.5
ENST00000675709.1
CDS TCA 72 bp CCAATTTTTGAACTGTTCCTTTTGATGCAGGACAGGTaGGCTCCACCTTGGTGCTTAGCACATGAGGGTTTT +
Preference number: 6 (lower is better)
Translates to: PIFELFLLMQDR*APPWCLAHEGF
Trigger: AAAACCCTCATGTGCTAAGCACCAAGGTGGAGCTCACCTGTCCTGCATCAAAAGGAACAGTTCAAAAATTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674678.1
CDS CCA 72 bp CAAAATGCAGCATCTCTTAATTTCCTTACAACCAAATaGGGAGCGAGGGTGGTGGGGATGAGCATATGTGAT +
Preference number: 6 (lower is better)
Translates to: QNAASLNFLTTK*GARVVGMSICD
Trigger: ATCACATATGCTCATCCCCACCACCCTCGCTCCCCATTTGGTTGTAAGGAAATTAAGAGATGCTGCATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675709.1
CDS CAA 72 bp ATGTTTGGTTCTGTGGGTGGCCTTGAATTTGTAACTTaGCAGCGTGCCACTCTTGCTTCATTTCATCCAGGT +
Preference number: 6 (lower is better)
Translates to: MFGSVGGLEFVT*QRATLASFHPG
Trigger: ACCTGGATGAAATGAAGCAAGAGTGGCACGCTGCAAAGTTACAAATTCAAGGCCACCCACAGAACCAAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468573.5
ENST00000675709.1
CDS CAA 72 bp GCAGCCCAATACTTTCCTCTGTTGTTTCATCAAGGTTaGGGTACGAGAGAAAATGAGGTTCGACGCTCAGTT +
Preference number: 6 (lower is better)
Translates to: AAQYFPLLFHQG*GTRENEVRRSV
Trigger: AACTGAGCGTCGAACCTCATTTTCTCTCGTACCCAAACCTTGATGAAACAACAGAGGAAAGTATTGGGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468573.5
CDS CAA 90 bp CCTACAATTGCAGCCCAATACTTTCCTCTGTTGTTTCATCAAGGTTaGGGTACGAGAGAAAATGAGGTTCGACGCTCAGTTTCTGTCTCA +
Preference number: 6 (lower is better)
Translates to: PTIAAQYFPLLFHQG*GTRENEVRRSVSVS
Trigger: TGAGACAGAAACTGAGCGTCGAACCTCATTTTCTCTCGTACCCAAACCTTGATGAAACAACAGAGGAAAGTATTGGGCTGCAATTGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468573.5
CDS TCA 72 bp TCGATTCATGATGATGTAGGTCGTAAACAGATTCATTaGAATGACCCCGATAATCAGATCGGCACAGGCCAG +
Preference number: 6 (lower is better)
Translates to: SIHDDVGRKQIH*NDPDNQIGTGQ
Trigger: CTGGCCTGTGCCGATCTGATTATCGGGGTCATTTCAATGAATCTGTTTACGACCTACATCATCATGAATCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255380.8
ENST00000615928.5
ENST00000675184.1
ENST00000675709.1
ENST00000676153.1
ENST00000676433.1
CDS TCA 72 bp CTCCTCTGTGTGGAAGCTGTGGATGTATTCCTAACTTaGGGAGGCCCCTGTCATTACAATAATCTGTCTAAT +
Preference number: 6 (lower is better)
Translates to: LLCVEAVDVFLT*GGPCHYNNLSN
Trigger: ATTAGACAGATTATTGTAATGACAGGGGCCTCCTCAAGTTAGGAATACATCCACAGCTTCCACACAGAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674678.1
CDS CCA 72 bp CAGCCCAATACTTTCCTCTGTTGTTTCATCAAGGTTTaGGTACGAGAGAAAATGAGGTTCGACGCTCAGTTT +
Preference number: 6 (lower is better)
Translates to: QPNTFLCCFIKV*VREKMRFDAQF
Trigger: AAACTGAGCGTCGAACCTCATTTTCTCTCGTACCCAAACCTTGATGAAACAACAGAGGAAAGTATTGGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468573.5
CDS CAA 72 bp GCGTGCCACTCTTGCTTCATTTCATCCAGGTTTTTCTaGACATCTGAAGAGGCAGTATCTCTAGGGAGTATA +
Preference number: 6 (lower is better)
Translates to: ACHSCFISSRFF*TSEEAVSLGSI
Trigger: TATACTCCCTAGAGATACTGCCTCTTCAGATGTCAAGAAAAACCTGGATGAAATGAAGCAAGAGTGGCACGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000468573.5
ENST00000675709.1
CDS TCA 72 bp AAGGCGAGGTTGTACTGTTATTGTGCAAGGTCATTGTaGCTCTCTGACATAGTAATCTACCAGGAACTGAGT +
Preference number: 6 (lower is better)
Translates to: KARLYCYCARSL*LSDIVIYQELS
Trigger: ACTCAGTTCCTGGTAGATTACTATGTCAGAGAGTCACAATGACCTTGCACAATAACAGTACAACCTCGCCTT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255380.8
ENST00000448020.1
ENST00000615928.5
ENST00000675184.1
ENST00000675709.1
ENST00000676153.1
ENST00000676433.1
CDS TCA 72 bp CACAAGTGTAGTGAAGAGACTTGGTTCTGTACATCATaGTGGGGATGGATACAGTTCATTCAATCCACAGTC +
Preference number: 6 (lower is better)
Translates to: HKCSEETWFCTS*WGWIQFIQSTV
Trigger: GACTGTGGATTGAATGAACTGTATCCATCCCCATCATGATGTACAGAACCAAGTCTCTTCACTACACTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000468573.5
ENST00000615928.5
ENST00000676153.1
CDS TCA 72 bp TCTGTTGTTTCATCAAGGTTTGGGTACGAGAGAAAATaGGGTTCGACGCTCAGTTTCTGTCTCAACAACCAT +
Preference number: 6 (lower is better)
Translates to: SVVSSRFGYERK*GSTLSFCLNNH
Trigger: ATGGTTGTTGAGACAGAAACTGAGCGTCGAACCTCATTTTCTCTCGTACCCAAACCTTGATGAAACAACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468573.5
CDS TCA 72 bp TTCTCCTTTTTGTCTGTGTGTCTGGGATGCCGACTATaGATTCTGCTTCATTATGTGGTACTTGAGATTGGG +
Preference number: 6 (lower is better)
Translates to: FSFLSVCLGCRL*ILLHYVVLEIG
Trigger: CCCAATCTCAAGTACCACATAATGAAGCAGAATTCATAGTCGGCATCCCAGACACACAGACAAAAAGGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676433.1
CDS TCA 72 bp AGTGCTACTAGTGAAGAGACTTGGTTCTGTACATCATaGTGGGGATGGATACAGTTCATTCAATCCACAGTC +
Preference number: 6 (lower is better)
Translates to: SATSEETWFCTS*WGWIQFIQSTV
Trigger: GACTGTGGATTGAATGAACTGTATCCATCCCCATCATGATGTACAGAACCAAGTCTCTTCACTAGTAGCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675184.1
CDS TCA 72 bp GACTCCATTAGTGAAGAGACTTGGTTCTGTACATCATaGTGGGGATGGATACAGTTCATTCAATCCACAGTC +
Preference number: 6 (lower is better)
Translates to: DSISEETWFCTS*WGWIQFIQSTV
Trigger: GACTGTGGATTGAATGAACTGTATCCATCCCCATCATGATGTACAGAACCAAGTCTCTTCACTAATGGAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674678.1
CDS GCA 72 bp TTTTGTCTGTGTGTCTGGGATGCCGACTATGAATTCTaGTTCATTATGTGGTACTTGAGATTGGGACAGGTT +
Preference number: 6 (lower is better)
Translates to: FCLCVWDADYEF*FIMWYLRLGQV
Trigger: AACCTGTCCCAATCTCAAGTACCACATAATGAAGCAGAATTCATAGTCGGCATCCCAGACACACAGACAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676433.1
CDS CCA 72 bp GTCTGGGATGCCGACTATGAATTCTGCTTCATTATGTaGTACTTGAGATTGGGACAGGTTTCAAATACACAC +
Preference number: 6 (lower is better)
Translates to: VWDADYEFCFIM*YLRLGQVSNTH
Trigger: GTGTGTATTTGAAACCTGTCCCAATCTCAAGTACCACATAATGAAGCAGAATTCATAGTCGGCATCCCAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676433.1
CDS CAA 72 bp ATCCATGACTCAAGGTTTGCTTTTGTGCGCCTACAATaGCAGCCCAATACTTTCCTCTGTTGTTTCATCAAG +
Preference number: 6 (lower is better)
Translates to: IHDSRFAFVRLQ*QPNTFLCCFIK
Trigger: CTTGATGAAACAACAGAGGAAAGTATTGGGCTGCAATTGTAGGCGCACAAAAGCAAACCTTGAGTCATGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468573.5
CDS TCA 72 bp ATACCTACTAGTGAAGAGACTTGGTTCTGTACATCATaGTGGGGATGGATACAGTTCATTCAATCCACAGTC +
Preference number: 6 (lower is better)
Translates to: IPTSEETWFCTS*WGWIQFIQSTV
Trigger: GACTGTGGATTGAATGAACTGTATCCATCCCCATCATGATGTACAGAACCAAGTCTCTTCACTAGTAGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481779.1
CDS TCA 72 bp ACTGTACATAGTGAAGAGACTTGGTTCTGTACATCATaGTGGGGATGGATACAGTTCATTCAATCCACAGTC +
Preference number: 6 (lower is better)
Translates to: TVHSEETWFCTS*WGWIQFIQSTV
Trigger: GACTGTGGATTGAATGAACTGTATCCATCCCCATCATGATGTACAGAACCAAGTCTCTTCACTATGTACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492335.5
CDS CAA 90 bp AACTTTGCAGCGTGCCACTCTTGCTTCATTTCATCCAGGTTTTTCTaGACATCTGAAGAGGCAGTATCTCTAGGGAGTATATTTTTGTAT +
Preference number: 6 (lower is better)
Translates to: NFAACHSCFISSRFF*TSEEAVSLGSIFLY
Trigger: ATACAAAAATATACTCCCTAGAGATACTGCCTCTTCAGATGTCAAGAAAAACCTGGATGAAATGAAGCAAGAGTGGCACGCTGCAAAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000468573.5
ENST00000675709.1
CDS TCA 72 bp ATGCCGACTATGAATTCTGCTTCATTATGTGGTACTTaGGATTGGGACAGGTTTCAAATACACACGTTGTGT +
Preference number: 6 (lower is better)
Translates to: MPTMNSASLCGT*DWDRFQIHTLC
Trigger: ACACAACGTGTGTATTTGAAACCTGTCCCAATCTCAAGTACCACATAATGAAGCAGAATTCATAGTCGGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676433.1
CDS CCA 72 bp CACAACACCGTAAATATCATACACCAACTGTTAATATaGTGCATCTGTGAGTGGAAGCACATCAAATACCCT +
Preference number: 6 (lower is better)
Translates to: HNTVNIIHQLLI*CICEWKHIKYP
Trigger: AGGGTATTTGATGTGCTTCCACTCACAGATGCACCATATTAACAGTTGGTGTATGATATTTACGGTGTTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481779.1
CDS TCA 72 bp GATGGATACAGTTCATTCAATCCACAGTCCTCTGAGTaGCTCATAACCAAAATATGTGCCATTACTGTTCAT +
Preference number: 6 (lower is better)
Translates to: DGYSSFNPQSSE*LITKICAITVH
Trigger: ATGAACAGTAATGGCACATATTTTGGTTATGAGTCACTCAGAGGACTGTGGATTGAATGAACTGTATCCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000468573.5
ENST00000481779.1
ENST00000492335.5
ENST00000615928.5
ENST00000674678.1
ENST00000675184.1
ENST00000676153.1
CDS GCA 72 bp AACACCGTAAATATCATACACCAACTGTTAATATGGTaGATCTGTGAGTGGAAGCACATCAAATACCCTGTA +
Preference number: 6 (lower is better)
Translates to: NTVNIIHQLLIW*ICEWKHIKYPV
Trigger: TACAGGGTATTTGATGTGCTTCCACTCACAGATGCACCATATTAACAGTTGGTGTATGATATTTACGGTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481779.1
CDS GCA 72 bp CCCACCTTCTACCTCATTTTGTCACAAGGTCTCAAGTaGACATCCCATATTATTTCTAATACGGTAATGTTT +
Preference number: 6 (lower is better)
Translates to: PTFYLILSQGLK*TSHIISNTVMF
Trigger: AAACATTACCGTATTAGAAATAATATGGGATGTGCACTTGAGACCTTGTGACAAAATGAGGTAGAAGGTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674678.1
CDS TCA 72 bp CTCTTGCTTCATTTCATCCAGGTTTTTCTTGACATCTaGAGAGGCAGTATCTCTAGGGAGTATATTTTTGTA +
Preference number: 6 (lower is better)
Translates to: LLLHFIQVFLDI*RGSISREYIFV
Trigger: TACAAAAATATACTCCCTAGAGATACTGCCTCTTCAGATGTCAAGAAAAACCTGGATGAAATGAAGCAAGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000468573.5
ENST00000675709.1
CDS CAA 90 bp TCGGTAAAAAGTTTAAGCTTACATTGGCACCAGATCTATATGATATaGACCAGAAGACATCGAAACTGTCCAGTGACGTTTCTTAATTCA +
Preference number: 6 (lower is better)
Translates to: SVKSLSLHWHQIYMI*TRRHRNCPVTFLNS
Trigger: TGAATTAAGAAACGTCACTGGACAGTTTCGATGTCTTCTGGTCAATATCATATAGATCTGGTGCCAATGTAAGCTTAAACTTTTTACCGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481779.1
CDS CCA 72 bp TTGCAACGTAGTAAACAGAGTTTGATACCTATTTACTaGCTGAGCTTAATAAAGAGATCACTATATTGCCTC +
Preference number: 6 (lower is better)
Translates to: LQRSKQSLIPIY*LSLIKRSLYCL
Trigger: GAGGCAATATAGTGATCTCTTTATTAAGCTCAGCCAGTAAATAGGTATCAAACTCTGTTTACTACGTTGCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674678.1
CDS CAA 72 bp GCAAAGCATAAACTCGGTAAAAAGTTTAAGCTTACATaGGCACCAGATCTATATGATATTGACCAGAAGACA +
Preference number: 6 (lower is better)
Translates to: AKHKLGKKFKLT*APDLYDIDQKT
Trigger: TGTCTTCTGGTCAATATCATATAGATCTGGTGCCAATGTAAGCTTAAACTTTTTACCGAGTTTATGCTTTGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481779.1
CDS TCA 72 bp TTGAGATTGGGACAGGTTTCAAATACACACGTTGTGTaGGCATCATTTTTCTATAACTACAAACCCTATATT +
Preference number: 6 (lower is better)
Translates to: LRLGQVSNTHVV*ASFFYNYKPYI
Trigger: AATATAGGGTTTGTAGTTATAGAAAAATGATGCTCACACAACGTGTGTATTTGAAACCTGTCCCAATCTCAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676433.1
CDS CCA 72 bp CAAAGCATAAACTCGGTAAAAAGTTTAAGCTTACATTaGCACCAGATCTATATGATATTGACCAGAAGACAT +
Preference number: 6 (lower is better)
Translates to: QSINSVKSLSLH*HQIYMILTRRH
Trigger: ATGTCTTCTGGTCAATATCATATAGATCTGGTGCCAATGTAAGCTTAAACTTTTTACCGAGTTTATGCTTTG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481779.1
CDS CAA 72 bp CTACTTTGTCTATCATTGCAACGTAGTAAACAGAGTTaGATACCTATTTACTGGCTGAGCTTAATAAAGAGA +
Preference number: 6 (lower is better)
Translates to: LLCLSLQRSKQS*IPIYWLSLIKR
Trigger: TCTCTTTATTAAGCTCAGCCAGTAAATAGGTATCAAACTCTGTTTACTACGTTGCAATGATAGACAAAGTAG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674678.1