Pregenerated sensors for CHP2 (Homo sapiens)
Ensembl gene IDs: ENSG00000166869Ensembl transcript IDs: ENST00000300113.3
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTCACAGCTCTGAGACCAAATGAGATAGACCTGGTGTGGGGTCTGTaGTCTGTTAGGAACCGGGCTGCACAGCACAAGGTGAGCGGCAGG | + |
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Preference number: 1 (lower is better) Translates to: FTALRPNEIDLVWGL*SVRNRAAQHKVSGR Trigger: CCTGCCGCTCACCTTGTGCTGTGCAGCCCGGTTCCTAACAGACCACAGACCCCACACCAGGTCTATCTCATTTGGTCTCAGAGCTGTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| 3UTR TCA 90 bp | TGTGGGGTCTGTGGTCTGTTAGGAACCGGGCTGCACAGCACAAGGTaGGCGGCAGGCGAGCTGAAGCTTCATCTATATTTACAGCCACTC | + |
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Preference number: 1 (lower is better) Translates to: CGVCGLLGTGLHSTR*AAGELKLHLYLQPL Trigger: GAGTGGCTGTAAATATAGATGAAGCTTCAGCTCGCCTGCCGCTCACCTTGTGCTGTGCAGCCCGGTTCCTAACAGACCACAGACCCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| 3UTR TCA 90 bp | CAGTTTATTGTCGCCCTGCGTCCATGCGTCCATGGGGGCTTTGGATaGATTCCAAGGAGATACTGGTTGCAGGAGCAAGCCCAAGGCACA | + |
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Preference number: 1 (lower is better) Translates to: QFIVALRPCVHGGFG*IPRRYWLQEQAQGT Trigger: TGTGCCTTGGGCTTGCTCCTGCAACCAGTATCTCCTTGGAATTCATCCAAAGCCCCCATGGACGCATGGACGCAGGGCGACAATAAACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| 3UTR CCA 90 bp | AATACAGTTTATTGTCGCCCTGCGTCCATGCGTCCATGGGGGCTTTaGATGAATTCCAAGGAGATACTGGTTGCAGGAGCAAGCCCAAGG | + |
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Preference number: 1 (lower is better) Translates to: NTVYCRPASMRPWGL*MNSKEILVAGASPR Trigger: CCTTGGGCTTGCTCCTGCAACCAGTATCTCCTTGGAATTCATCCAAAGCCCCCATGGACGCATGGACGCAGGGCGACAATAAACTGTATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| 3UTR TCA 90 bp | CTCTTCCCACTGGGTTACTGGGTTAGCAGGATAGAAGCCTGGAGCTaGTGGTGGTCATCTCCATCACTAGGAAAGAGCCTTCCTGAAAAT | + |
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Preference number: 1 (lower is better) Translates to: LFPLGYWVSRIEAWS*WWSSPSLGKSLPEN Trigger: ATTTTCAGGAAGGCTCTTTCCTAGTGATGGAGATGACCACCATCAGCTCCAGGCTTCTATCCTGCTAACCCAGTAACCCAGTGGGAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| 3UTR GCA 90 bp | GTCCAGACTTCAAGGGTCCCTCACAGTAATGGGCATCTCTTGTTTTaGCCGAGCAGAGCAGACCACTCGTTTCCCCTTATTCTGCTAATT | + |
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Preference number: 1 (lower is better) Translates to: VQTSRVPHSNGHLLF*PSRADHSFPLILLI Trigger: AATTAGCAGAATAAGGGGAAACGAGTGGTCTGCTCTGCTCGGGCAAAACAAGAGATGCCCATTACTGTGAGGGACCCTTGAAGTCTGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| 3UTR CCA 90 bp | CAGGCTTACAGACAGAAAAAGCTGAGCTGGGAGATGGAGAATAACTaGAGCCTGATGACATCATTTGTGCCCTTGGATCCAGCTGTGCCT | + |
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Preference number: 1 (lower is better) Translates to: QAYRQKKLSWEMENN*SLMTSFVPLDPAVP Trigger: AGGCACAGCTGGATCCAAGGGCACAAATGATGTCATCAGGCTCCAGTTATTCTCCATCTCCCAGCTCAGCTTTTTCTGTCTGTAAGCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| 3UTR CCA 90 bp | AGAAACGAAAATACAGTTTATTGTCGCCCTGCGTCCATGCGTCCATaGGGGCTTTGGATGAATTCCAAGGAGATACTGGTTGCAGGAGCA | + |
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Preference number: 1 (lower is better) Translates to: RNENTVYCRPASMRP*GLWMNSKEILVAGA Trigger: TGCTCCTGCAACCAGTATCTCCTTGGAATTCATCCAAAGCCCCCATGGACGCATGGACGCAGGGCGACAATAAACTGTATTTTCGTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| 3UTR CCA 90 bp | AAGAGCCTTCCTGAAAATCAGGCTTACAGACAGAAAAAGCTGAGCTaGGAGATGGAGAATAACTGGAGCCTGATGACATCATTTGTGCCC | + |
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Preference number: 1 (lower is better) Translates to: KSLPENQAYRQKKLS*EMENNWSLMTSFVP Trigger: GGGCACAAATGATGTCATCAGGCTCCAGTTATTCTCCATCTCCCAGCTCAGCTTTTTCTGTCTGTAAGCCTGATTTTCAGGAAGGCTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| 3UTR GCA 90 bp | GAGCCCAAATCCTACTGTGAACTGCACACCAAAGGATCTAGATTGTaGACTCCTTATGAGAATCTAATGCCTGATGATCTGTCACTGTCT | + |
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Preference number: 1 (lower is better) Translates to: EPKSYCELHTKGSRL*TPYENLMPDDLSLS Trigger: AGACAGTGACAGATCATCAGGCATTAGATTCTCATAAGGAGTGCACAATCTAGATCCTTTGGTGTGCAGTTCACAGTAGGATTTGGGCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| 3UTR TCA 90 bp | TGTTTCATTCCCCTAGAAGTAGAGATGAGACCCCAAACGGGTCAATaGCACTCTCCACTTGGAATTATTGGAATAAGTAAATCTCTTCCC | + |
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Preference number: 1 (lower is better) Translates to: CFIPLEVEMRPQTGQ*HSPLGIIGISKSLP Trigger: GGGAAGAGATTTACTTATTCCAATAATTCCAAGTGGAGAGTGTCATTGACCCGTTTGGGGTCTCATCTCTACTTCTAGGGGAATGAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| 3UTR TCA 90 bp | ATATGGGACCGTCTAATTGCAGGAAAACAAGCTCAGGGCTCCTGCTaGTTCTACATTATGGTGAGTTGTATAATTATTTCATTATATATT | + |
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Preference number: 1 (lower is better) Translates to: IWDRLIAGKQAQGSC*FYIMVSCIIISLYI Trigger: AATATATAATGAAATAATTATACAACTCACCATAATGTAGAATCAGCAGGAGCCCTGAGCTTGTTTTCCTGCAATTAGACGGTCCCATAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| 3UTR-3UTR GCA 90 bp | GTTTTGCCCGAGCAGAGCAGACCACTCGTTTCCCCTTATTCTGCTAATTGTATTGTCGCCCTGCGTCCATaGGTCCATGGGGGCTTTGGA | + |
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Preference number: 2 (lower is better) Translates to: VLPEQSRPLVSPYSANCIVALRP*VHGGFG Trigger: TCCAAAGCCCCCATGGACGCATGGACGCAGGGCGAC...AATACAATTAGCAGAATAAGGGGAAACGAGTGGTCTGCTCTGCTCGGGCAAAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| 3UTR CAA 90 bp | AAATACAGTTTATTGTCGCCCTGCGTCCATGCGTCCATGGGGGCTTaGGATGAATTCCAAGGAGATACTGGTTGCAGGAGCAAGCCCAAG | + |
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Preference number: 2 (lower is better) Translates to: KYSLLSPCVHASMGA*DEFQGDTGCRSKPK Trigger: CTTGGGCTTGCTCCTGCAACCAGTATCTCCTTGGAATTCATCCAAAGCCCCCATGGACGCATGGACGCAGGGCGACAATAAACTGTATTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| 3UTR-3UTR TCA 90 bp | TTTACATCGTCTCTTCCCTACTGCATCAAGCCCCATCATCCTAGCATGCACCCAATAGAAGCCTGGAGCTaGTGGTGGTCATCTCCATCA | + |
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Preference number: 2 (lower is better) Translates to: FTSSLPYCIKPHHPSMHPIEAWS*WWSSPS Trigger: TGATGGAGATGACCACCATCAGCTCCAGGCTTCTAT...TGGGTGCATGCTAGGATGATGGGGCTTGATGCAGTAGGGAAGAGACGATGTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| 3UTR-3UTR GCA 90 bp | GTTTTGCCCGAGCAGAGCAGACCACTCGTTTCCCCTTATTCTGCTAATTGTATTAGTTTATTGTCGCCCTaGGTCCATGCGTCCATGGGG | + |
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Preference number: 2 (lower is better) Translates to: VLPEQSRPLVSPYSANCISLLSP*VHASMG Trigger: CCCCATGGACGCATGGACGCAGGGCGACAATAAACT...AATACAATTAGCAGAATAAGGGGAAACGAGTGGTCTGCTCTGCTCGGGCAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| 3UTR-3UTR CCA 90 bp | GTTTTGCCCGAGCAGAGCAGACCACTCGTTTCCCCTTATTCTGCTAATTGTATTGCGTCCATGCGTCCATaGGGGCTTTGGATGAATTCC | + |
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Preference number: 2 (lower is better) Translates to: VLPEQSRPLVSPYSANCIASMRP*GLWMNS Trigger: GGAATTCATCCAAAGCCCCCATGGACGCATGGACGC...AATACAATTAGCAGAATAAGGGGAAACGAGTGGTCTGCTCTGCTCGGGCAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| 3UTR-3UTR GCA 90 bp | GTTTTGCCCGAGCAGAGCAGACCACTCGTTTCCCCTTATTCTGCTAATTGTATTCAAGGAGATACTGGTTaGAGGAGCAAGCCCAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: VLPEQSRPLVSPYSANCIQGDTG*RSKPKA Trigger: TGCCTTGGGCTTGCTCCTGCAACCAGTATCTCCTTG...AATACAATTAGCAGAATAAGGGGAAACGAGTGGTCTGCTCTGCTCGGGCAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| 3UTR-3UTR TCA 90 bp | CCTTATGAGAATCTAATGCCTGATGATCTGTCACTGTCTCCCATCACTCCCATACATGGGGGCTTTGGATaGATTCCAAGGAGATACTGG | + |
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Preference number: 2 (lower is better) Translates to: PYENLMPDDLSLSPITPIHGGFG*IPRRYW Trigger: CCAGTATCTCCTTGGAATTCATCCAAAGCCCCCATG...TATGGGAGTGATGGGAGACAGTGACAGATCATCAGGCATTAGATTCTCATAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| 3UTR-3UTR TCA 90 bp | AGATTGTGCACTCCTTATGAGAATCTAATGCCTGATGATCTGTCACTGTCTCCCGCTCAGGGCTCCTGCTaGTTCTACATTATGGTGAGT | + |
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Preference number: 2 (lower is better) Translates to: RLCTPYENLMPDDLSLSPAQGSC*FYIMVS Trigger: ACTCACCATAATGTAGAATCAGCAGGAGCCCTGAGC...GGGAGACAGTGACAGATCATCAGGCATTAGATTCTCATAAGGAGTGCACAATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| 3UTR-3UTR CCA 90 bp | AGATCAGCAGTGGCATTAGATTATCATAGGAGCCCAAATCCTACTGTGAACTGCCCCATCACTCCCATATaGGACCGTCTAATTGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: RSAVALDYHRSPNPTVNCPITPI*DRLIAG Trigger: TCCTGCAATTAGACGGTCCCATATGGGAGTGATGGG...GCAGTTCACAGTAGGATTTGGGCTCCTATGATAATCTAATGCCACTGCTGATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| 3UTR-3UTR CCA 90 bp | AGATCAGCAGTGGCATTAGATTATCATAGGAGCCCAAATCCTACTGTGAACTGCATTCCAAGGAGATACTaGTTGCAGGAGCAAGCCCAA | + |
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Preference number: 2 (lower is better) Translates to: RSAVALDYHRSPNPTVNCIPRRY*LQEQAQ Trigger: TTGGGCTTGCTCCTGCAACCAGTATCTCCTTGGAAT...GCAGTTCACAGTAGGATTTGGGCTCCTATGATAATCTAATGCCACTGCTGATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| 3UTR-3UTR CCA 90 bp | AGCCTTCCTGAAAATCAGGCTTACAGACAGAAAAAGCTGAGCTGGGAGATGGAGCAACTAAAATATTGCTaGCTGATTCACAGCTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: SLPENQAYRQKKLSWEMEQLKYC*LIHSSE Trigger: CTCAGAGCTGTGAATCAGCCAGCAATATTTTAGTTG...CTCCATCTCCCAGCTCAGCTTTTTCTGTCTGTAAGCCTGATTTTCAGGAAGGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| 3UTR CAA 90 bp | ACTGCTGAGCTAGACTTTAGTACACATCCTTCCAGCTTTCTTCTCTaGGCCCTAAATAGAGTTAGAAACGAAAATACAGTTTATTGTCGC | + |
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Preference number: 2 (lower is better) Translates to: TAELDFSTHPSSFLL*ALNRVRNENTVYCR Trigger: GCGACAATAAACTGTATTTTCGTTTCTAACTCTATTTAGGGCCAAGAGAAGAAAGCTGGAAGGATGTGTACTAAAGTCTAGCTCAGCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| 3UTR CAA 90 bp | AATGTAATCATAATAGAAATAAAGTGCACAATAAATGTAATGCACTaGAATCATCCCAAAACCATCCCCTGTCACCCATCCGTGGAAAAA | + |
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Preference number: 2 (lower is better) Translates to: NVIIIEIKCTINVMH*NHPKTIPCHPSVEK Trigger: TTTTTCCACGGATGGGTGACAGGGGATGGTTTTGGGATGATTCAAGTGCATTACATTTATTGTGCACTTTATTTCTATTATGATTACATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| 3UTR TCA 72 bp | GTCGCCCTGCGTCCATGCGTCCATGGGGGCTTTGGATaGATTCCAAGGAGATACTGGTTGCAGGAGCAAGCC | + |
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Preference number: 3 (lower is better) Translates to: VALRPCVHGGFG*IPRRYWLQEQA Trigger: GGCTTGCTCCTGCAACCAGTATCTCCTTGGAATTCATCCAAAGCCCCCATGGACGCATGGACGCAGGGCGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| 3UTR CCA 72 bp | CTGAGACCAAATGAGATAGACCTGGTGTGGGGTCTGTaGTCTGTTAGGAACCGGGCTGCACAGCACAAGGTG | + |
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Preference number: 3 (lower is better) Translates to: LRPNEIDLVWGL*SVRNRAAQHKV Trigger: CACCTTGTGCTGTGCAGCCCGGTTCCTAACAGACCACAGACCCCACACCAGGTCTATCTCATTTGGTCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| 3UTR CCA 72 bp | TATTGTCGCCCTGCGTCCATGCGTCCATGGGGGCTTTaGATGAATTCCAAGGAGATACTGGTTGCAGGAGCA | + |
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Preference number: 3 (lower is better) Translates to: YCRPASMRPWGL*MNSKEILVAGA Trigger: TGCTCCTGCAACCAGTATCTCCTTGGAATTCATCCAAAGCCCCCATGGACGCATGGACGCAGGGCGACAATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| 3UTR CCA 72 bp | TTCACAGCTCTGAGACCAAATGAGATAGACCTGGTGTaGGGTCTGTGGTCTGTTAGGAACCGGGCTGCACAG | + |
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Preference number: 3 (lower is better) Translates to: FTALRPNEIDLV*GLWSVRNRAAQ Trigger: CTGTGCAGCCCGGTTCCTAACAGACCACAGACCCCACACCAGGTCTATCTCATTTGGTCTCAGAGCTGTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| 3UTR TCA 72 bp | TGTGGTCTGTTAGGAACCGGGCTGCACAGCACAAGGTaGGCGGCAGGCGAGCTGAAGCTTCATCTATATTTA | + |
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Preference number: 3 (lower is better) Translates to: CGLLGTGLHSTR*AAGELKLHLYL Trigger: TAAATATAGATGAAGCTTCAGCTCGCCTGCCGCTCACCTTGTGCTGTGCAGCCCGGTTCCTAACAGACCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| 3UTR-3UTR CAA 90 bp | CACATGACACAGGCCTGGCCACTCAGAGTGTTTCATTCCCCTAGAAGTAGAGATCTGATGCCAAAAAGGTaGGGGACTGCTGAGCTAGAC | + |
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Preference number: 3 (lower is better) Translates to: HMTQAWPLRVFHSPRSRDLMPKR*GTAELD Trigger: GTCTAGCTCAGCAGTCCCCAACCTTTTTGGCATCAG...ATCTCTACTTCTAGGGGAATGAAACACTCTGAGTGGCCAGGCCTGTGTCATGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| 3UTR TCA 72 bp | CTGGGTTACTGGGTTAGCAGGATAGAAGCCTGGAGCTaGTGGTGGTCATCTCCATCACTAGGAAAGAGCCTT | + |
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Preference number: 3 (lower is better) Translates to: LGYWVSRIEAWS*WWSSPSLGKSL Trigger: AAGGCTCTTTCCTAGTGATGGAGATGACCACCATCAGCTCCAGGCTTCTATCCTGCTAACCCAGTAACCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| 3UTR GCA 72 bp | GCTGAAGCTTCATCTATATTTACAGCCACTCCCCATTaGTTGCATTACCGCCTGAGCTCTGCCTCCTGTCAG | + |
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Preference number: 3 (lower is better) Translates to: AEASSIFTATPH*LHYRLSSASCQ Trigger: CTGACAGGAGGCAGAGCTCAGGCGGTAATGCAAGCAATGGGGAGTGGCTGTAAATATAGATGAAGCTTCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| 3UTR GCA 72 bp | TCAAGGGTCCCTCACAGTAATGGGCATCTCTTGTTTTaGCCGAGCAGAGCAGACCACTCGTTTCCCCTTATT | + |
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Preference number: 3 (lower is better) Translates to: SRVPHSNGHLLF*PSRADHSFPLI Trigger: AATAAGGGGAAACGAGTGGTCTGCTCTGCTCGGGCAAAACAAGAGATGCCCATTACTGTGAGGGACCCTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| 3UTR CCA 72 bp | CCTGATGATCTGTCACTGTCTCCCATCACTCCCATATaGGACCGTCTAATTGCAGGAAAACAAGCTCAGGGC | + |
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Preference number: 3 (lower is better) Translates to: PDDLSLSPITPI*DRLIAGKQAQG Trigger: GCCCTGAGCTTGTTTTCCTGCAATTAGACGGTCCCATATGGGAGTGATGGGAGACAGTGACAGATCATCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| 3UTR-3UTR CAA 90 bp | AGATTGTGCACTCCTTATGAGAATCTAATGCCTGATGATCTGTCACTGTCTCCCCCAAGGAGATACTGGTaGCAGGAGCAAGCCCAAGGC | + |
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Preference number: 3 (lower is better) Translates to: RLCTPYENLMPDDLSLSPPRRYW*QEQAQG Trigger: GCCTTGGGCTTGCTCCTGCAACCAGTATCTCCTTGG...GGGAGACAGTGACAGATCATCAGGCATTAGATTCTCATAAGGAGTGCACAATCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| 3UTR-3UTR CAA 90 bp | TTTACATCGTCTCTTCCCTACTGCATCAAGCCCCATCATCCTAGCATGCACCCACGAAAATACAGTTTATaGTCGCCCTGCGTCCATGCG | + |
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Preference number: 3 (lower is better) Translates to: FTSSLPYCIKPHHPSMHPRKYSL*SPCVHA Trigger: CGCATGGACGCAGGGCGACAATAAACTGTATTTTCG...TGGGTGCATGCTAGGATGATGGGGCTTGATGCAGTAGGGAAGAGACGATGTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| 3UTR-3UTR CAA 90 bp | TTTACATCGTCTCTTCCCTACTGCATCAAGCCCCATCATCCTAGCATGCACCCAAGTAATGGGCATCTCTaGTTTTGCCCGAGCAGAGCA | + |
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Preference number: 3 (lower is better) Translates to: FTSSLPYCIKPHHPSMHPSNGHL*FCPSRA Trigger: TGCTCTGCTCGGGCAAAACAAGAGATGCCCATTACT...TGGGTGCATGCTAGGATGATGGGGCTTGATGCAGTAGGGAAGAGACGATGTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| 3UTR TCA 72 bp | TCAGACCTTATTTCCCTGGCTCTAGGAATTAGCACATaGCACAGGCCTGGCCACTCAGAGTGTTTCATTCCC | + |
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Preference number: 3 (lower is better) Translates to: SDLISLALGIST*HRPGHSECFIP Trigger: GGGAATGAAACACTCTGAGTGGCCAGGCCTGTGTCATGTGCTAATTCCTAGAGCCAGGGAAATAAGGTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| 3UTR-3UTR CAA 90 bp | CACATGACACAGGCCTGGCCACTCAGAGTGTTTCATTCCCCTAGAAGTAGAGATACATCATTTGTGCCCTaGGATCCAGCTGTGCCTAAA | + |
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Preference number: 3 (lower is better) Translates to: HMTQAWPLRVFHSPRSRDTSFVP*DPAVPK Trigger: TTTAGGCACAGCTGGATCCAAGGGCACAAATGATGT...ATCTCTACTTCTAGGGGAATGAAACACTCTGAGTGGCCAGGCCTGTGTCATGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| 3UTR CCA 72 bp | AATACAGTTTATTGTCGCCCTGCGTCCATGCGTCCATaGGGGCTTTGGATGAATTCCAAGGAGATACTGGTT | + |
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Preference number: 3 (lower is better) Translates to: NTVYCRPASMRP*GLWMNSKEILV Trigger: AACCAGTATCTCCTTGGAATTCATCCAAAGCCCCCATGGACGCATGGACGCAGGGCGACAATAAACTGTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| 3UTR-3UTR CAA 90 bp | ATCCTAGCATGCACCCAGGAAATCAGCAAAAACCCATTTAAGAGTCCAGACTTCGCGTCCATGGGGGCTTaGGATGAATTCCAAGGAGAT | + |
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Preference number: 3 (lower is better) Translates to: ILACTQEISKNPFKSPDFASMGA*DEFQGD Trigger: ATCTCCTTGGAATTCATCCAAAGCCCCCATGGACGC...GAAGTCTGGACTCTTAAATGGGTTTTTGCTGATTTCCTGGGTGCATGCTAGGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| 3UTR-3UTR CAA 90 bp | GTCCCTCACAGTAATGGGCATCTCTTGTTTTGCCCGAGCAGAGCAGACCACTCGTGGGTTTTCAGTGATTaGCAACTAAAATATTGCTGG | + |
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Preference number: 3 (lower is better) Translates to: VPHSNGHLLFCPSRADHSWVFSD*QLKYCW Trigger: CCAGCAATATTTTAGTTGCAAATCACTGAAAACCCA...CGAGTGGTCTGCTCTGCTCGGGCAAAACAAGAGATGCCCATTACTGTGAGGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| 3UTR-3UTR CAA 90 bp | AGCCTTCCTGAAAATCAGGCTTACAGACAGAAAAAGCTGAGCTGGGAGATGGAGTCCAGCTTTCTTCTCTaGGCCCTAAATAGAGTTAGA | + |
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Preference number: 3 (lower is better) Translates to: SLPENQAYRQKKLSWEMESSFLL*ALNRVR Trigger: TCTAACTCTATTTAGGGCCAAGAGAAGAAAGCTGGA...CTCCATCTCCCAGCTCAGCTTTTTCTGTCTGTAAGCCTGATTTTCAGGAAGGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| 3UTR CCA 72 bp | CCTGAAAATCAGGCTTACAGACAGAAAAAGCTGAGCTaGGAGATGGAGAATAACTGGAGCCTGATGACATCA | + |
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Preference number: 3 (lower is better) Translates to: PENQAYRQKKLS*EMENNWSLMTS Trigger: TGATGTCATCAGGCTCCAGTTATTCTCCATCTCCCAGCTCAGCTTTTTCTGTCTGTAAGCCTGATTTTCAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| 3UTR TCA 72 bp | TCATTTTCCTTTAAGCAACCACCTTTCACCCCATCCTaGATCCTCAGACCTTATTTCCCTGGCTCTAGGAAT | + |
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Preference number: 3 (lower is better) Translates to: SFSFKQPPFTPS*ILRPYFPGSRN Trigger: ATTCCTAGAGCCAGGGAAATAAGGTCTGAGGATTCAGGATGGGGTGAAAGGTGGTTGCTTAAAGGAAAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| 3UTR GCA 72 bp | TCCTACTGTGAACTGCACACCAAAGGATCTAGATTGTaGACTCCTTATGAGAATCTAATGCCTGATGATCTG | + |
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Preference number: 3 (lower is better) Translates to: SYCELHTKGSRL*TPYENLMPDDL Trigger: CAGATCATCAGGCATTAGATTCTCATAAGGAGTGCACAATCTAGATCCTTTGGTGTGCAGTTCACAGTAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| 3UTR TCA 72 bp | CGTCTAATTGCAGGAAAACAAGCTCAGGGCTCCTGCTaGTTCTACATTATGGTGAGTTGTATAATTATTTCA | + |
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Preference number: 3 (lower is better) Translates to: RLIAGKQAQGSC*FYIMVSCIIIS Trigger: TGAAATAATTATACAACTCACCATAATGTAGAATCAGCAGGAGCCCTGAGCTTGTTTTCCTGCAATTAGACG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR TCA 90 bp | ACAGCCACTCCCCATTGCTTGCATTACCGCCTGAGCTCTGCCTCCTGTCAGATCCTGCACAGCACAAGGTaGGCGGCAGGCGAGCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: TATPHCLHYRLSSASCQILHSTR*AAGELK Trigger: CTTCAGCTCGCCTGCCGCTCACCTTGTGCTGTGCAG...GATCTGACAGGAGGCAGAGCTCAGGCGGTAATGCAAGCAATGGGGAGTGGCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR CCA 90 bp | GTCCCTCACAGTAATGGGCATCTCTTGTTTTGCCCGAGCAGAGCAGACCACTCGCGGAGCAGGCTGGCTTaGGAGAAGCCGGTCTCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: VPHSNGHLLFCPSRADHSRSRLA*EKPVSR Trigger: GCGAGAGACCGGCTTCTCCCAAGCCAGCCTGCTCCG...CGAGTGGTCTGCTCTGCTCGGGCAAAACAAGAGATGCCCATTACTGTGAGGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR GCA 90 bp | CACATGACACAGGCCTGGCCACTCAGAGTGTTTCATTCCCCTAGAAGTAGAGATGCCCGGAACCGGTGGTaGAGGCGGAGCAGGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HMTQAWPLRVFHSPRSRDARNRW*RRSRLA Trigger: AGCCAGCCTGCTCCGCCTGCACCACCGGTTCCGGGC...ATCTCTACTTCTAGGGGAATGAAACACTCTGAGTGGCCAGGCCTGTGTCATGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR CCA 90 bp | ACAGCCACTCCCCATTGCTTGCATTACCGCCTGAGCTCTGCCTCCTGTCAGATCAGCGCCCCTATCTGCTaGAGATCCATGCGGCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TATPHCLHYRLSSASCQISAPIC*RSMRLR Trigger: CCTGAGCCGCATGGATCTCCAGCAGATAGGGGCGCT...GATCTGACAGGAGGCAGAGCTCAGGCGGTAATGCAAGCAATGGGGAGTGGCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR GCA 90 bp | CCATGGGGGCTTTGGATGAATTCCAAGGAGATACTGGTTGCAGGAGCAAGCCCAGCGAGCGCCCCTATCTaGTGGAGATCCATGCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PWGLWMNSKEILVAGASPASAPI*WRSMRL Trigger: GAGCCGCATGGATCTCCAGCAGATAGGGGCGCTCGC...TGGGCTTGCTCCTGCAACCAGTATCTCCTTGGAATTCATCCAAAGCCCCCATGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR GCA 90 bp | CCATGGGGGCTTTGGATGAATTCCAAGGAGATACTGGTTGCAGGAGCAAGCCCAGTCGCCCTGCGTCCATaGGTCCATGGGGGCTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PWGLWMNSKEILVAGASPVALRP*VHGGFG Trigger: TCCAAAGCCCCCATGGACGCATGGACGCAGGGCGAC...TGGGCTTGCTCCTGCAACCAGTATCTCCTTGGAATTCATCCAAAGCCCCCATGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR CCA 90 bp | CACATGACACAGGCCTGGCCACTCAGAGTGTTTCATTCCCCTAGAAGTAGAGATGGAATGACCGCGGCGTaGGAGCTGCGCGACCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: HMTQAWPLRVFHSPRSRDGMTAA*ELRDPM Trigger: CATGGGGTCGCGCAGCTCCCACGCCGCGGTCATTCC...ATCTCTACTTCTAGGGGAATGAAACACTCTGAGTGGCCAGGCCTGTGTCATGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR CCA 90 bp | ACAGCCACTCCCCATTGCTTGCATTACCGCCTGAGCTCTGCCTCCTGTCAGATCGACCCTGACAAAGCCTaGGAAATCCACTCGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TATPHCLHYRLSSASCQIDPDKA*EIHSLA Trigger: AGCCAGCGAGTGGATTTCCCAGGCTTTGTCAGGGTC...GATCTGACAGGAGGCAGAGCTCAGGCGGTAATGCAAGCAATGGGGAGTGGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR TCA 90 bp | AGATCAGCAGTGGCATTAGATTATCATAGGAGCCCAAATCCTACTGTGAACTGCTGTCCCCGTCGGGAATaGCCGCGGCGTGGGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RSAVALDYHRSPNPTVNCCPRRE*PRRGSC Trigger: GCAGCTCCCACGCCGCGGTCATTCCCGACGGGGACA...GCAGTTCACAGTAGGATTTGGGCTCCTATGATAATCTAATGCCACTGCTGATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR GCA 90 bp | ATGCGTCCATGGGGGCTTTGGATGAATTCCAAGGAGATACTGGTTGCAGGAGCACAGCCTCCTGCACCGTaGGGTCAGCGATGTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: MRPWGLWMNSKEILVAGAQPPAP*GQRCSP Trigger: TGGAGAACATCGCTGACCGCACGGTGCAGGAGGCTG...TGCTCCTGCAACCAGTATCTCCTTGGAATTCATCCAAAGCCCCCATGGACGCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000300113.3 |
||
| CDS-3UTR GCA 90 bp | CCATGGGGGCTTTGGATGAATTCCAAGGAGATACTGGTTGCAGGAGCAAGCCCATCTTCATCAGCCTCCTaGACCGTGCGGTCAGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: PWGLWMNSKEILVAGASPSSSAS*TVRSAM Trigger: CATCGCTGACCGCACGGTGCAGGAGGCTGATGAAGA...TGGGCTTGCTCCTGCAACCAGTATCTCCTTGGAATTCATCCAAAGCCCCCATGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR GCA 90 bp | ACAGCCACTCCCCATTGCTTGCATTACCGCCTGAGCTCTGCCTCCTGTCAGATCCAAGGAGATACTGGTTaGAGGAGCAAGCCCAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TATPHCLHYRLSSASCQIQGDTG*RSKPKA Trigger: TGCCTTGGGCTTGCTCCTGCAACCAGTATCTCCTTG...GATCTGACAGGAGGCAGAGCTCAGGCGGTAATGCAAGCAATGGGGAGTGGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR CCA 90 bp | ATCCTAGCATGCACCCAGGAAATCAGCAAAAACCCATTTAAGAGTCCAGACTTCAGCTGCGCGACCCCATaGCCGAGCTGGAGGCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ILACTQEISKNPFKSPDFSCATP*PSWRRK Trigger: CTTCCGCCTCCAGCTCGGCCATGGGGTCGCGCAGCT...GAAGTCTGGACTCTTAAATGGGTTTTTGCTGATTTCCTGGGTGCATGCTAGGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR CCA 90 bp | AGATTGTGCACTCCTTATGAGAATCTAATGCCTGATGATCTGTCACTGTCTCCCAGTGCCCGGAACCGGTaGTGCAGGCGGAGCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RLCTPYENLMPDDLSLSPSARNR*CRRSRL Trigger: CAGCCTGCTCCGCCTGCACCACCGGTTCCGGGCACT...GGGAGACAGTGACAGATCATCAGGCATTAGATTCTCATAAGGAGTGCACAATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300113.3 |
||
| 3UTR CAA 72 bp | TTATTGTCGCCCTGCGTCCATGCGTCCATGGGGGCTTaGGATGAATTCCAAGGAGATACTGGTTGCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLSPCVHASMGA*DEFQGDTGCRS Trigger: GCTCCTGCAACCAGTATCTCCTTGGAATTCATCCAAAGCCCCCATGGACGCATGGACGCAGGGCGACAATAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| 3UTR CAA 72 bp | CAGACTTCAAGGGTCCCTCACAGTAATGGGCATCTCTaGTTTTGCCCGAGCAGAGCAGACCACTCGTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: QTSRVPHSNGHL*FCPSRADHSFP Trigger: GGGAAACGAGTGGTCTGCTCTGCTCGGGCAAAACAAGAGATGCCCATTACTGTGAGGGACCCTTGAAGTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR TCA 90 bp | GTCCCTCACAGTAATGGGCATCTCTTGTTTTGCCCGAGCAGAGCAGACCACTCGCATGGGGGCTTTGGATaGATTCCAAGGAGATACTGG | + |
|
Preference number: 4 (lower is better) Translates to: VPHSNGHLLFCPSRADHSHGGFG*IPRRYW Trigger: CCAGTATCTCCTTGGAATTCATCCAAAGCCCCCATG...CGAGTGGTCTGCTCTGCTCGGGCAAAACAAGAGATGCCCATTACTGTGAGGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR GCA 90 bp | CATGCGTCCATGGGGGCTTTGGATGAATTCCAAGGAGATACTGGTTGCAGGAGCGCGATGTTCTCCAGCTaGTCTTCTGTCACCTGTACC | + |
|
Preference number: 4 (lower is better) Translates to: HASMGALDEFQGDTGCRSAMFSS*SSVTCT Trigger: GGTACAGGTGACAGAAGAGCAGCTGGAGAACATCGC...GCTCCTGCAACCAGTATCTCCTTGGAATTCATCCAAAGCCCCCATGGACGCATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR CCA 90 bp | AGATCAGCAGTGGCATTAGATTATCATAGGAGCCCAAATCCTACTGTGAACTGCGCAGGCGGAGCAGGCTaGCTTGGGAGAAGCCGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RSAVALDYHRSPNPTVNCAGGAG*LGRSRS Trigger: AGACCGGCTTCTCCCAAGCCAGCCTGCTCCGCCTGC...GCAGTTCACAGTAGGATTTGGGCTCCTATGATAATCTAATGCCACTGCTGATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR CCA 90 bp | CATGCGTCCATGGGGGCTTTGGATGAATTCCAAGGAGATACTGGTTGCAGGAGCGCAGCATCTCATGCCTaGAGATCTTCCCATCGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: HASMGALDEFQGDTGCRSAASHA*RSSHRD Trigger: ATCGCGATGGGAAGATCTCCAGGCATGAGATGCTGC...GCTCCTGCAACCAGTATCTCCTTGGAATTCATCCAAAGCCCCCATGGACGCATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR CCA 90 bp | CATCTCTTGTTTTGCCCGAGCAGAGCAGACCACTCGTTTCCCCTTATTCTGCTACTGGTGTGGGGTCTGTaGTCTGTTAGGAACCGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HLLFCPSRADHSFPLILLLVWGL*SVRNRA Trigger: AGCCCGGTTCCTAACAGACCACAGACCCCACACCAG...TAGCAGAATAAGGGGAAACGAGTGGTCTGCTCTGCTCGGGCAAAACAAGAGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR TCA 90 bp | ATCACTCCCATATGGGACCGTCTAATTGCAGGAAAACAAGCTCAGGGCTCCTGCAGCTCTGAGACCAAATaGGATAGACCTGGTGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ITPIWDRLIAGKQAQGSCSSETK*DRPGVG Trigger: CCCCACACCAGGTCTATCTCATTTGGTCTCAGAGCT...GCAGGAGCCCTGAGCTTGTTTTCCTGCAATTAGACGGTCCCATATGGGAGTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR GCA 90 bp | GCTCTGCCTCCTGTCAGATCAGCAGTGGCATTAGATTATCATAGGAGCCCAAATAGTTTATTGTCGCCCTaGGTCCATGCGTCCATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ALPPVRSAVALDYHRSPNSLLSP*VHASMG Trigger: CCCCATGGACGCATGGACGCAGGGCGACAATAAACT...ATTTGGGCTCCTATGATAATCTAATGCCACTGCTGATCTGACAGGAGGCAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR CCA 90 bp | CATGCGTCCATGGGGGCTTTGGATGAATTCCAAGGAGATACTGGTTGCAGGAGCATTCCAAGGAGATACTaGTTGCAGGAGCAAGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: HASMGALDEFQGDTGCRSIPRRY*LQEQAQ Trigger: TTGGGCTTGCTCCTGCAACCAGTATCTCCTTGGAAT...GCTCCTGCAACCAGTATCTCCTTGGAATTCATCCAAAGCCCCCATGGACGCATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR CCA 90 bp | CATGCGTCCATGGGGGCTTTGGATGAATTCCAAGGAGATACTGGTTGCAGGAGCCGTCCATGGGGGCTTTaGATGAATTCCAAGGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: HASMGALDEFQGDTGCRSRPWGL*MNSKEI Trigger: TATCTCCTTGGAATTCATCCAAAGCCCCCATGGACG...GCTCCTGCAACCAGTATCTCCTTGGAATTCATCCAAAGCCCCCATGGACGCATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR GCA 90 bp | AGATCAGCAGTGGCATTAGATTATCATAGGAGCCCAAATCCTACTGTGAACTGCCTTATTCCTGTCCAGTaGCCGGAACCGGTGGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RSAVALDYHRSPNPTVNCLIPVQ*PEPVVQ Trigger: CTGCACCACCGGTTCCGGGCACTGGACAGGAATAAG...GCAGTTCACAGTAGGATTTGGGCTCCTATGATAATCTAATGCCACTGCTGATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR CCA 90 bp | AGATCAGCAGTGGCATTAGATTATCATAGGAGCCCAAATCCTACTGTGAACTGCGGGAAATCCACTCGCTaGCTCCCATCGGGGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RSAVALDYHRSPNPTVNCGKSTR*LPSGKK Trigger: CTTCTTCCCCGATGGGAGCCAGCGAGTGGATTTCCC...GCAGTTCACAGTAGGATTTGGGCTCCTATGATAATCTAATGCCACTGCTGATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR CCA 90 bp | ATGCGTCCATGGGGGCTTTGGATGAATTCCAAGGAGATACTGGTTGCAGGAGCACATCATTTGTGCCCTTaGATCCAGCTGTGCCTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: MRPWGLWMNSKEILVAGAHHLCP*IQLCLK Trigger: CTTTAGGCACAGCTGGATCCAAGGGCACAAATGATG...TGCTCCTGCAACCAGTATCTCCTTGGAATTCATCCAAAGCCCCCATGGACGCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR TCA 90 bp | GCTCTGCCTCCTGTCAGATCAGCAGTGGCATTAGATTATCATAGGAGCCCAAATTCTCTAAGGACTTGGTaGACTCCACGAAGGACACAG | + |
|
Preference number: 4 (lower is better) Translates to: ALPPVRSAVALDYHRSPNSLRTW*TPRRTQ Trigger: CTGTGTCCTTCGTGGAGTTCACCAAGTCCTTAGAGA...ATTTGGGCTCCTATGATAATCTAATGCCACTGCTGATCTGACAGGAGGCAGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR TCA 90 bp | CACATGACACAGGCCTGGCCACTCAGAGTGTTTCATTCCCCTAGAAGTAGAGATCCTTTCACCCCATCCTaGATCCTCAGACCTTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: HMTQAWPLRVFHSPRSRDPFTPS*ILRPYF Trigger: GAAATAAGGTCTGAGGATTCAGGATGGGGTGAAAGG...ATCTCTACTTCTAGGGGAATGAAACACTCTGAGTGGCCAGGCCTGTGTCATGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR GCA 90 bp | AGATCAGCAGTGGCATTAGATTATCATAGGAGCCCAAATCCTACTGTGAACTGCGGGCATCTCTTGTTTTaGCCGAGCAGAGCAGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: RSAVALDYHRSPNPTVNCGHLLF*PSRADH Trigger: GTGGTCTGCTCTGCTCGGGCAAAACAAGAGATGCCC...GCAGTTCACAGTAGGATTTGGGCTCCTATGATAATCTAATGCCACTGCTGATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR CCA 90 bp | CCTTATGAGAATCTAATGCCTGATGATCTGTCACTGTCTCCCATCACTCCCATAGCGTCCATGCGTCCATaGGGGCTTTGGATGAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: PYENLMPDDLSLSPITPIASMRP*GLWMNS Trigger: GGAATTCATCCAAAGCCCCCATGGACGCATGGACGC...TATGGGAGTGATGGGAGACAGTGACAGATCATCAGGCATTAGATTCTCATAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR GCA 90 bp | TGTAATGCACTTGAATCATCCCAAAACCATCCCCTGTCACCCATCCGTGGAAAATCGTCTCTTCCCTACTaGATCAAGCCCCATCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: CNALESSQNHPLSPIRGKSSLPY*IKPHHP Trigger: AGGATGATGGGGCTTGATGCAGTAGGGAAGAGACGA...TTTTCCACGGATGGGTGACAGGGGATGGTTTTGGGATGATTCAAGTGCATTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR CCA 90 bp | GTTTTGCCCGAGCAGAGCAGACCACTCGTTTCCCCTTATTCTGCTAATTGTATTCCCATCACTCCCATATaGGACCGTCTAATTGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VLPEQSRPLVSPYSANCIPITPI*DRLIAG Trigger: TCCTGCAATTAGACGGTCCCATATGGGAGTGATGGG...AATACAATTAGCAGAATAAGGGGAAACGAGTGGTCTGCTCTGCTCGGGCAAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR CCA 90 bp | AGATTGTGCACTCCTTATGAGAATCTAATGCCTGATGATCTGTCACTGTCTCCCGAGATAGACCTGGTGTaGGGTCTGTGGTCTGTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: RLCTPYENLMPDDLSLSPEIDLV*GLWSVR Trigger: CCTAACAGACCACAGACCCCACACCAGGTCTATCTC...GGGAGACAGTGACAGATCATCAGGCATTAGATTCTCATAAGGAGTGCACAATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR TCA 90 bp | ATCCTAGCATGCACCCAGGAAATCAGCAAAAACCCATTTAAGAGTCCAGACTTCGCCCAAATCCTACTGTaGACTGCACACCAAAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: ILACTQEISKNPFKSPDFAQILL*TAHQRI Trigger: GATCCTTTGGTGTGCAGTTCACAGTAGGATTTGGGC...GAAGTCTGGACTCTTAAATGGGTTTTTGCTGATTTCCTGGGTGCATGCTAGGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR CCA 90 bp | AGCCTTCCTGAAAATCAGGCTTACAGACAGAAAAAGCTGAGCTGGGAGATGGAGCAGAAAAAGCTGAGCTaGGAGATGGAGAATAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLPENQAYRQKKLSWEMEQKKLS*EMENNW Trigger: CCAGTTATTCTCCATCTCCCAGCTCAGCTTTTTCTG...CTCCATCTCCCAGCTCAGCTTTTTCTGTCTGTAAGCCTGATTTTCAGGAAGGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR CCA 90 bp | AGATTGTGCACTCCTTATGAGAATCTAATGCCTGATGATCTGTCACTGTCTCCCCACATGACACAGGCCTaGCCACTCAGAGTGTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RLCTPYENLMPDDLSLSPHMTQA*PLRVFH Trigger: ATGAAACACTCTGAGTGGCCAGGCCTGTGTCATGTG...GGGAGACAGTGACAGATCATCAGGCATTAGATTCTCATAAGGAGTGCACAATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR TCA 90 bp | ATAGAGTTAGAAACGAAAATACAGTTTATTGTCGCCCTGCGTCCATGCGTCCATATAGAAGCCTGGAGCTaGTGGTGGTCATCTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: IELETKIQFIVALRPCVHIEAWS*WWSSPS Trigger: TGATGGAGATGACCACCATCAGCTCCAGGCTTCTAT...ATGGACGCATGGACGCAGGGCGACAATAAACTGTATTTTCGTTTCTAACTCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR GCA 90 bp | CCTTATGAGAATCTAATGCCTGATGATCTGTCACTGTCTCCCATCACTCCCATACCTTGGATCCAGCTGTaGCTAAAGGCAGATACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PYENLMPDDLSLSPITPIPWIQL*LKADTS Trigger: AGAAGTATCTGCCTTTAGGCACAGCTGGATCCAAGG...TATGGGAGTGATGGGAGACAGTGACAGATCATCAGGCATTAGATTCTCATAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300113.3 |
||
| CDS-3UTR GCA 90 bp | AGATTGTGCACTCCTTATGAGAATCTAATGCCTGATGATCTGTCACTGTCTCCCCCCATCATCCTAGCATaGACCCAGGAAATCAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RLCTPYENLMPDDLSLSPPIILA*TQEISK Trigger: TTTGCTGATTTCCTGGGTGCATGCTAGGATGATGGG...GGGAGACAGTGACAGATCATCAGGCATTAGATTCTCATAAGGAGTGCACAATCT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000300113.3 |
||
| CDS-3UTR GCA 90 bp | AAAGTGCACAATAAATGTAATGCACTTGAATCATCCCAAAACCATCCCCTGTCAACCTGCAGCATCTCATaGCTGGAGATCTTCCCATCG | + |
|
Preference number: 4 (lower is better) Translates to: KVHNKCNALESSQNHPLSTCSIS*LEIFPS Trigger: CGATGGGAAGATCTCCAGGCATGAGATGCTGCAGGT...TGACAGGGGATGGTTTTGGGATGATTCAAGTGCATTACATTTATTGTGCACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR GCA 90 bp | AAAGTGCACAATAAATGTAATGCACTTGAATCATCCCAAAACCATCCCCTGTCAATGGGACCGTCTAATTaGAGGAAAACAAGCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KVHNKCNALESSQNHPLSMGPSN*RKTSSG Trigger: CCCTGAGCTTGTTTTCCTGCAATTAGACGGTCCCAT...TGACAGGGGATGGTTTTGGGATGATTCAAGTGCATTACATTTATTGTGCACTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000300113.3 |
||
| CDS-3UTR CCA 90 bp | CCTTATGAGAATCTAATGCCTGATGATCTGTCACTGTCTCCCATCACTCCCATACAACTAAAATATTGCTaGCTGATTCACAGCTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PYENLMPDDLSLSPITPIQLKYC*LIHSSE Trigger: CTCAGAGCTGTGAATCAGCCAGCAATATTTTAGTTG...TATGGGAGTGATGGGAGACAGTGACAGATCATCAGGCATTAGATTCTCATAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300113.3 |
||
| CDS-3UTR TCA 90 bp | AAAGTGCACAATAAATGTAATGCACTTGAATCATCCCAAAACCATCCCCTGTCAACAGACAGAAAAAGCTaGGCTGGGAGATGGAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: KVHNKCNALESSQNHPLSTDRKS*AGRWRI Trigger: TATTCTCCATCTCCCAGCTCAGCTTTTTCTGTCTGT...TGACAGGGGATGGTTTTGGGATGATTCAAGTGCATTACATTTATTGTGCACTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000300113.3 |
||
| 3UTR CAA 72 bp | AAATCCTACTGTGAACTGCACACCAAAGGATCTAGATaGTGCACTCCTTATGAGAATCTAATGCCTGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: KSYCELHTKGSR*CTPYENLMPDD Trigger: ATCATCAGGCATTAGATTCTCATAAGGAGTGCACAATCTAGATCCTTTGGTGTGCAGTTCACAGTAGGATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300113.3 |
||
| 3UTR CAA 72 bp | CTAGACTTTAGTACACATCCTTCCAGCTTTCTTCTCTaGGCCCTAAATAGAGTTAGAAACGAAAATACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LDFSTHPSSFLL*ALNRVRNENTV Trigger: AACTGTATTTTCGTTTCTAACTCTATTTAGGGCCAAGAGAAGAAAGCTGGAAGGATGTGTACTAAAGTCTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS TCA 90 bp | CTTGGGAGAAGCCGGTCTCTCGCCGAATACTGTCCCCGTCGGGAATaGCCGCGGCGTGGGAGCTGCGCGACCCCATGGCCGAGCTGGAGG | + |
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Preference number: 5 (lower is better) Translates to: LGRSRSLAEYCPRRE*PRRGSCATPWPSWR Trigger: CCTCCAGCTCGGCCATGGGGTCGCGCAGCTCCCACGCCGCGGTCATTCCCGACGGGGACAGTATTCGGCGAGAGACCGGCTTCTCCCAAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR CAA 90 bp | GCTCTGCCTCCTGTCAGATCAGCAGTGGCATTAGATTATCATAGGAGCCCAAATGCGGAGCAGGCTGGCTaGGGAGAAGCCGGTCTCTCG | + |
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Preference number: 5 (lower is better) Translates to: ALPPVRSAVALDYHRSPNAEQAG*GEAGLS Trigger: CGAGAGACCGGCTTCTCCCAAGCCAGCCTGCTCCGC...ATTTGGGCTCCTATGATAATCTAATGCCACTGCTGATCTGACAGGAGGCAGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS GCA 90 bp | CATGCGTCCATGGGGGCTTTGGATGAATTCCAAGGAGATACTGGTTaGAGGAGCAAGCCCAAGGCACAAACGGAGTCACTTCAGGATCCG | + |
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Preference number: 5 (lower is better) Translates to: HASMGALDEFQGDTG*RSKPKAQTESLQDP Trigger: CGGATCCTGAAGTGACTCCGTTTGTGCCTTGGGCTTGCTCCTGCAACCAGTATCTCCTTGGAATTCATCCAAAGCCCCCATGGACGCATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS TCA 90 bp | TTTCTGTGTCCTCATCTTCTACAGGGCGAAAATGAGCCAAGACCCTaGCAAAGCCTGGGAAATCCACTCGCTGGCTCCCATCGGGGAAGA | + |
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Preference number: 5 (lower is better) Translates to: FLCPHLLQGENEPRP*QSLGNPLAGSHRGR Trigger: TCTTCCCCGATGGGAGCCAGCGAGTGGATTTCCCAGGCTTTGTCAGGGTCTTGGCTCATTTTCGCCCTGTAGAAGATGAGGACACAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR CAA 90 bp | TTTACATCGTCTCTTCCCTACTGCATCAAGCCCCATCATCCTAGCATGCACCCACCAAGGAGATACTGGTaGCAGGAGCAAGCCCAAGGC | + |
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Preference number: 5 (lower is better) Translates to: FTSSLPYCIKPHHPSMHPPRRYW*QEQAQG Trigger: GCCTTGGGCTTGCTCCTGCAACCAGTATCTCCTTGG...TGGGTGCATGCTAGGATGATGGGGCTTGATGCAGTAGGGAAGAGACGATGTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR CAA 90 bp | GTCCCTCACAGTAATGGGCATCTCTTGTTTTGCCCGAGCAGAGCAGACCACTCGCGAAAATACAGTTTATaGTCGCCCTGCGTCCATGCG | + |
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Preference number: 5 (lower is better) Translates to: VPHSNGHLLFCPSRADHSRKYSL*SPCVHA Trigger: CGCATGGACGCAGGGCGACAATAAACTGTATTTTCG...CGAGTGGTCTGCTCTGCTCGGGCAAAACAAGAGATGCCCATTACTGTGAGGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR CAA 90 bp | CATCTCTTGTTTTGCCCGAGCAGAGCAGACCACTCGTTTCCCCTTATTCTGCTAGCCACTCCCCATTGCTaGCATTACCGCCTGAGCTCT | + |
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Preference number: 5 (lower is better) Translates to: HLLFCPSRADHSFPLILLATPHC*HYRLSS Trigger: AGAGCTCAGGCGGTAATGCAAGCAATGGGGAGTGGC...TAGCAGAATAAGGGGAAACGAGTGGTCTGCTCTGCTCGGGCAAAACAAGAGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS CCA 90 bp | CTCATCTTCTACAGGGCGAAAATGAGCCAAGACCCTGACAAAGCCTaGGAAATCCACTCGCTGGCTCCCATCGGGGAAGAAGCTTTCTAT | + |
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Preference number: 5 (lower is better) Translates to: LIFYRAKMSQDPDKA*EIHSLAPIGEEAFY Trigger: ATAGAAAGCTTCTTCCCCGATGGGAGCCAGCGAGTGGATTTCCCAGGCTTTGTCAGGGTCTTGGCTCATTTTCGCCCTGTAGAAGATGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR CAA 90 bp | ATCACTCCCATATGGGACCGTCTAATTGCAGGAAAACAAGCTCAGGGCTCCTGCCTGATGCCAAAAAGGTaGGGGACTGCTGAGCTAGAC | + |
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Preference number: 5 (lower is better) Translates to: ITPIWDRLIAGKQAQGSCLMPKR*GTAELD Trigger: GTCTAGCTCAGCAGTCCCCAACCTTTTTGGCATCAG...GCAGGAGCCCTGAGCTTGTTTTCCTGCAATTAGACGGTCCCATATGGGAGTGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR CAA 90 bp | CACATGACACAGGCCTGGCCACTCAGAGTGTTTCATTCCCCTAGAAGTAGAGATTGGGCATCTCTTGTTTaGCCCGAGCAGAGCAGACCA | + |
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Preference number: 5 (lower is better) Translates to: HMTQAWPLRVFHSPRSRDWASLV*PEQSRP Trigger: TGGTCTGCTCTGCTCGGGCAAAACAAGAGATGCCCA...ATCTCTACTTCTAGGGGAATGAAACACTCTGAGTGGCCAGGCCTGTGTCATGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR CAA 90 bp | TTTACATCGTCTCTTCCCTACTGCATCAAGCCCCATCATCCTAGCATGCACCCAAGGTTTCTTGGGGTCTaGGGTTTCTGTGTCCTCATC | + |
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Preference number: 5 (lower is better) Translates to: FTSSLPYCIKPHHPSMHPRFLGV*GFCVLI Trigger: GATGAGGACACAGAAACCCAAGACCCCAAGAAACCT...TGGGTGCATGCTAGGATGATGGGGCTTGATGCAGTAGGGAAGAGACGATGTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR CAA 90 bp | ATCACTCCCATATGGGACCGTCTAATTGCAGGAAAACAAGCTCAGGGCTCCTGCATCTTCTCTAAGGACTaGGTGAACTCCACGAAGGAC | + |
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Preference number: 5 (lower is better) Translates to: ITPIWDRLIAGKQAQGSCIFSKD*VNSTKD Trigger: GTCCTTCGTGGAGTTCACCAAGTCCTTAGAGAAGAT...GCAGGAGCCCTGAGCTTGTTTTCCTGCAATTAGACGGTCCCATATGGGAGTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR CAA 90 bp | ACAGCCACTCCCCATTGCTTGCATTACCGCCTGAGCTCTGCCTCCTGTCAGATCTTTGCAACTAAAATATaGCTGGCTGATTCACAGCTC | + |
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Preference number: 5 (lower is better) Translates to: TATPHCLHYRLSSASCQIFATKI*LADSQL Trigger: GAGCTGTGAATCAGCCAGCAATATTTTAGTTGCAAA...GATCTGACAGGAGGCAGAGCTCAGGCGGTAATGCAAGCAATGGGGAGTGGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR CAA 90 bp | ATGCGTCCATGGGGGCTTTGGATGAATTCCAAGGAGATACTGGTTGCAGGAGCATTGTTCCTTCTGCTGTaGAGAGGTTCAGGTTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: MRPWGLWMNSKEILVAGALFLLL*RGSGFL Trigger: CAAGAAACCTGAACCTCTCAACAGCAGAAGGAACAA...TGCTCCTGCAACCAGTATCTCCTTGGAATTCATCCAAAGCCCCCATGGACGCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR CAA 90 bp | GCTCTGCCTCCTGTCAGATCAGCAGTGGCATTAGATTATCATAGGAGCCCAAATACATCATTTGTGCCCTaGGATCCAGCTGTGCCTAAA | + |
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Preference number: 5 (lower is better) Translates to: ALPPVRSAVALDYHRSPNTSFVP*DPAVPK Trigger: TTTAGGCACAGCTGGATCCAAGGGCACAAATGATGT...ATTTGGGCTCCTATGATAATCTAATGCCACTGCTGATCTGACAGGAGGCAGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR CAA 90 bp | GTTTTGCCCGAGCAGAGCAGACCACTCGTTTCCCCTTATTCTGCTAATTGTATTAGTAATGGGCATCTCTaGTTTTGCCCGAGCAGAGCA | + |
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Preference number: 5 (lower is better) Translates to: VLPEQSRPLVSPYSANCISNGHL*FCPSRA Trigger: TGCTCTGCTCGGGCAAAACAAGAGATGCCCATTACT...AATACAATTAGCAGAATAAGGGGAAACGAGTGGTCTGCTCTGCTCGGGCAAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR CAA 90 bp | ATCCTAGCATGCACCCAGGAAATCAGCAAAAACCCATTTAAGAGTCCAGACTTCAGAGGTTCAGGTTTCTaGGGGTCTTGGGTTTCTGTG | + |
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Preference number: 5 (lower is better) Translates to: ILACTQEISKNPFKSPDFRGSGF*GSWVSV Trigger: CACAGAAACCCAAGACCCCAAGAAACCTGAACCTCT...GAAGTCTGGACTCTTAAATGGGTTTTTGCTGATTTCCTGGGTGCATGCTAGGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR CAA 90 bp | AAAGTGCACAATAAATGTAATGCACTTGAATCATCCCAAAACCATCCCCTGTCAGCGTCCATGGGGGCTTaGGATGAATTCCAAGGAGAT | + |
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Preference number: 5 (lower is better) Translates to: KVHNKCNALESSQNHPLSASMGA*DEFQGD Trigger: ATCTCCTTGGAATTCATCCAAAGCCCCCATGGACGC...TGACAGGGGATGGTTTTGGGATGATTCAAGTGCATTACATTTATTGTGCACTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR CAA 90 bp | TGTAATGCACTTGAATCATCCCAAAACCATCCCCTGTCACCCATCCGTGGAAAATCCAGCTTTCTTCTCTaGGCCCTAAATAGAGTTAGA | + |
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Preference number: 5 (lower is better) Translates to: CNALESSQNHPLSPIRGKSSFLL*ALNRVR Trigger: TCTAACTCTATTTAGGGCCAAGAGAAGAAAGCTGGA...TTTTCCACGGATGGGTGACAGGGGATGGTTTTGGGATGATTCAAGTGCATTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS-3UTR CAA 90 bp | AGCCTTCCTGAAAATCAGGCTTACAGACAGAAAAAGCTGAGCTGGGAGATGGAGTGGGTTTTCAGTGATTaGCAACTAAAATATTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: SLPENQAYRQKKLSWEMEWVFSD*QLKYCW Trigger: CCAGCAATATTTTAGTTGCAAATCACTGAAAACCCA...CTCCATCTCCCAGCTCAGCTTTTTCTGTCTGTAAGCCTGATTTTCAGGAAGGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS CCA 72 bp | CGCCGAATACTGTCCCCGTCGGGAATGACCGCGGCGTaGGAGCTGCGCGACCCCATGGCCGAGCTGGAGGCG | + |
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Preference number: 6 (lower is better) Translates to: RRILSPSGMTAA*ELRDPMAELEA Trigger: CGCCTCCAGCTCGGCCATGGGGTCGCGCAGCTCCCACGCCGCGGTCATTCCCGACGGGGACAGTATTCGGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS TCA 72 bp | AGCCGGTCTCTCGCCGAATACTGTCCCCGTCGGGAATaGCCGCGGCGTGGGAGCTGCGCGACCCCATGGCCG | + |
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Preference number: 6 (lower is better) Translates to: SRSLAEYCPRRE*PRRGSCATPWP Trigger: CGGCCATGGGGTCGCGCAGCTCCCACGCCGCGGTCATTCCCGACGGGGACAGTATTCGGCGAGAGACCGGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS GCA 72 bp | CCCTTCTTATTCCTGTCCAGTGCCCGGAACCGGTGGTaGAGGCGGAGCAGGCTGGCTTGGGAGAAGCCGGTC | + |
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Preference number: 6 (lower is better) Translates to: PFLFLSSARNRW*RRSRLAWEKPV Trigger: GACCGGCTTCTCCCAAGCCAGCCTGCTCCGCCTGCACCACCGGTTCCGGGCACTGGACAGGAATAAGAAGGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS GCA 72 bp | GCCTCCTGCACCGTGCGGTCAGCGATGTTCTCCAGCTaGTCTTCTGTCACCTGTACCCCAACCATCAGACGG | + |
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Preference number: 6 (lower is better) Translates to: ASCTVRSAMFSS*SSVTCTPTIRR Trigger: CCGTCTGATGGTTGGGGTACAGGTGACAGAAGAGCAGCTGGAGAACATCGCTGACCGCACGGTGCAGGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS CCA 72 bp | TACAGGGCGAAAATGAGCCAAGACCCTGACAAAGCCTaGGAAATCCACTCGCTGGCTCCCATCGGGGAAGAA | + |
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Preference number: 6 (lower is better) Translates to: YRAKMSQDPDKA*EIHSLAPIGEE Trigger: TTCTTCCCCGATGGGAGCCAGCGAGTGGATTTCCCAGGCTTTGTCAGGGTCTTGGCTCATTTTCGCCCTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS TCA 72 bp | CCTCATCTTCTACAGGGCGAAAATGAGCCAAGACCCTaGCAAAGCCTGGGAAATCCACTCGCTGGCTCCCAT | + |
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Preference number: 6 (lower is better) Translates to: PHLLQGENEPRP*QSLGNPLAGSH Trigger: ATGGGAGCCAGCGAGTGGATTTCCCAGGCTTTGTCAGGGTCTTGGCTCATTTTCGCCCTGTAGAAGATGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS GCA 72 bp | ATGGGGGCTTTGGATGAATTCCAAGGAGATACTGGTTaGAGGAGCAAGCCCAAGGCACAAACGGAGTCACTT | + |
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Preference number: 6 (lower is better) Translates to: MGALDEFQGDTG*RSKPKAQTESL Trigger: AAGTGACTCCGTTTGTGCCTTGGGCTTGCTCCTGCAACCAGTATCTCCTTGGAATTCATCCAAAGCCCCCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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| CDS CAA 72 bp | CCTTCTGCTGTTGAGAGGTTCAGGTTTCTTGGGGTCTaGGGTTTCTGTGTCCTCATCTTCTACAGGGCGAAA | + |
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Preference number: 6 (lower is better) Translates to: PSAVERFRFLGV*GFCVLIFYRAK Trigger: TTTCGCCCTGTAGAAGATGAGGACACAGAAACCCAAGACCCCAAGAAACCTGAACCTCTCAACAGCAGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300113.3 |
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