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Pregenerated sensors for CHAC2 (Homo sapiens)

Ensembl gene IDs: ENSG00000143942

Ensembl transcript IDs: ENST00000295304.5

Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp CGCGGTGGTCCGTGCTGCCCTGCCAGAAGCGCCTGCTGTAGTTGGTaGTGTATCCGACCAGCTTGTCCTGATAGGGGAAATCCACCTTCC +
Preference number: 5 (lower is better)
Translates to: RGGPCCPARSACCSW*CIRPACPDRGNPPS
Trigger: GGAAGGTGGATTTCCCCTATCAGGACAAGCTGGTCGGATACATCACCAACTACAGCAGGCGCTTCTGGCAGGGCAGCACGGACCACCGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295304.5
CDS CCA 90 bp TTCTCTGAAGTCAAGGTATGCTTTTACTTCTTCTTCCTTTCCTACTaGCAATCTGTAAGCAACACCCCATACACATCCCGCAGGATCTTC +
Preference number: 5 (lower is better)
Translates to: FSEVKVCFYFFFLSY*QSVSNTPYTSRRIF
Trigger: GAAGATCCTGCGGGATGTGTATGGGGTGTTGCTTACAGATTGCCAGTAGGAAAGGAAGAAGAAGTAAAAGCATACCTTGACTTCAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295304.5
CDS GCA 90 bp TGCAAGTTCAAAAAGATATTCTGTATTTCTTCCACTTGGACCAGCTaGATTAAAAATTTGTTCAGCAATGTCTTCCAGAGGTGCAGGACC +
Preference number: 5 (lower is better)
Translates to: CKFKKIFCISSTWTS*IKNLFSNVFQRCRT
Trigger: GGTCCTGCACCTCTGGAAGACATTGCTGAACAAATTTTTAATGCAGCTGGTCCAAGTGGAAGAAATACAGAATATCTTTTTGAACTTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000295304.5
CDS GCA 90 bp TTCCCTTCTAAACGTTCCTTTACTAATTTTTCCAAAGCGAAAAGATaGTCATCTGCTTCTTCTGGCACAAGGTTCCTAATAGAATTTGCA +
Preference number: 5 (lower is better)
Translates to: FPSKRSFTNFSKAKR*SSASSGTRFLIEFA
Trigger: TGCAAATTCTATTAGGAACCTTGTGCCAGAAGAAGCAGATGAGCATCTTTTCGCTTTGGAAAAATTAGTAAAGGAACGTTTAGAAGGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295304.5
CDS TCA 72 bp CCACATCTTCTCGCGGCTCCTCTGCCCCAGTGGCCGTaGACCCTAGCTGTCGCCGCGCCGCCGGGGACTGAA +
Preference number: 6 (lower is better)
Translates to: PHLLAAPLPQWP*TLAVAAPPGTE
Trigger: TTCAGTCCCCGGCGGCGCGGCGACAGCTAGGGTTCACGGCCACTGGGGCAGAGGAGCCGCGAGAAGATGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295304.5
CDS TCA 72 bp CCGTGCTGCCCTGCCAGAAGCGCCTGCTGTAGTTGGTaGTGTATCCGACCAGCTTGTCCTGATAGGGGAAAT +
Preference number: 6 (lower is better)
Translates to: PCCPARSACCSW*CIRPACPDRGN
Trigger: ATTTCCCCTATCAGGACAAGCTGGTCGGATACATCACCAACTACAGCAGGCGCTTCTGGCAGGGCAGCACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295304.5
CDS CAA 90 bp AAGATATTCTGTATTTCTTCCACTTGGACCAGCTGCATTAAAAATTaGTTCAGCAATGTCTTCCAGAGGTGCAGGACCAAGATAATCAGG +
Preference number: 6 (lower is better)
Translates to: KIFCISSTWTSCIKN*FSNVFQRCRTKIIR
Trigger: CCTGATTATCTTGGTCCTGCACCTCTGGAAGACATTGCTGAACAAATTTTTAATGCAGCTGGTCCAAGTGGAAGAAATACAGAATATCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295304.5
CDS GCA 72 bp TGCATTAAAAATTTGTTCAGCAATGTCTTCCAGAGGTaGAGGACCAAGATAATCAGGATTATCACATGTTCC +
Preference number: 6 (lower is better)
Translates to: CIKNLFSNVFQR*RTKIIRIITCS
Trigger: GGAACATGTGATAATCCTGATTATCTTGGTCCTGCACCTCTGGAAGACATTGCTGAACAAATTTTTAATGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295304.5
CDS GCA 72 bp AAACGTTCCTTTACTAATTTTTCCAAAGCGAAAAGATaGTCATCTGCTTCTTCTGGCACAAGGTTCCTAATA +
Preference number: 6 (lower is better)
Translates to: KRSFTNFSKAKR*SSASSGTRFLI
Trigger: TATTAGGAACCTTGTGCCAGAAGAAGCAGATGAGCATCTTTTCGCTTTGGAAAAATTAGTAAAGGAACGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295304.5
CDS GCA 72 bp AAAAAGATATTCTGTATTTCTTCCACTTGGACCAGCTaGATTAAAAATTTGTTCAGCAATGTCTTCCAGAGG +
Preference number: 6 (lower is better)
Translates to: KKIFCISSTWTS*IKNLFSNVFQR
Trigger: CCTCTGGAAGACATTGCTGAACAAATTTTTAATGCAGCTGGTCCAAGTGGAAGAAATACAGAATATCTTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000295304.5