Pregenerated sensors for CERNA2 (Homo sapiens)
Ensembl gene IDs: ENSG00000285972Ensembl transcript IDs: ENST00000647830.1
Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GCAATTGCCTACCCGGGAGCGCTCTTTGGATCACGTCACTCAGGCTaGCCGGAGTTCCCCTCACGGATGCTCCACAGGGCAGGCCTAAGC | + |
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Preference number: 5 (lower is better) Translates to: AIAYPGALFGSRHSG*PEFPSRMLHRAGLS Trigger: GCTTAGGCCTGCCCTGTGGAGCATCCGTGAGGGGAACTCCGGCCAGCCTGAGTGACGTGATCCAAAGAGCGCTCCCGGGTAGGCAATTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647830.1 |
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| CDS GCA 90 bp | AGGGTCGTGATTGATTTGAGCAAGCAGGCGGTACATGACAGGGGCTaGATGCACCAGTGGTCAGAGAGAAACAGAACAGGGCAGGGAGTT | + |
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Preference number: 5 (lower is better) Translates to: RVVIDLSKQAVHDRG*MHQWSERNRTGQGV Trigger: AACTCCCTGCCCTGTTCTGTTTCTCTCTGACCACTGGTGCATGCAGCCCCTGTCATGTACCGCCTGCTTGCTCAAATCAATCACGACCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647830.1 |
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| CDS TCA 90 bp | TTTCCTCATGCTTCGGCCATGCGTGAACCAGTCAGCTTCCGGGTGTaGCCGGAACAAGGCTTGTCGTCTTCTTCAGAGTCACTTTGCAAG | + |
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Preference number: 5 (lower is better) Translates to: FPHASAMREPVSFRV*PEQGLSSSSESLCK Trigger: CTTGCAAAGTGACTCTGAAGAAGACGACAAGCCTTGTTCCGGTCACACCCGGAAGCTGACTGGTTCACGCATGGCCGAAGCATGAGGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647830.1 |
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| CDS CCA 90 bp | CCGGAACAAGGCTTGTCGTCTTCTTCAGAGTCACTTTGCAAGGGTTaGCAAAGCTGCTCCCATCCACGTACAGCTCCCAGTCTACTGATG | + |
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Preference number: 5 (lower is better) Translates to: PEQGLSSSSESLCKG*QSCSHPRTAPSLLM Trigger: CATCAGTAGACTGGGAGCTGTACGTGGATGGGAGCAGCTTTGCCAACCCTTGCAAAGTGACTCTGAAGAAGACGACAAGCCTTGTTCCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647830.1 |
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| CDS TCA 90 bp | CAGTCACCTCGTTTCCCAGTCAGGGAACCAAGAAATGTAGCAGGGTaGGCCGCAGACAAAACCTCTCAGACACTGAGTTGTAGAAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: QSPRFPVREPRNVAG*AADKTSQTLSCRRQ Trigger: CTGCCTTCTACAACTCAGTGTCTGAGAGGTTTTGTCTGCGGCTCACCCTGCTACATTTCTTGGTTCCCTGACTGGGAAACGAGGTGACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647830.1 |
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| CDS CCA 90 bp | GATTTGAGCAAGCAGGCGGTACATGACAGGGGCTGCATGCACCAGTaGTCAGAGAGAAACAGAACAGGGCAGGGAGTTTCACAATGTTCT | + |
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Preference number: 5 (lower is better) Translates to: DLSKQAVHDRGCMHQ*SERNRTGQGVSQCS Trigger: AGAACATTGTGAAACTCCCTGCCCTGTTCTGTTTCTCTCTGACCACTGGTGCATGCAGCCCCTGTCATGTACCGCCTGCTTGCTCAAATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647830.1 |
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| CDS GCA 90 bp | TGTGGAAGGAAGGGCTTTATTCAGCTGGGAGCATCAGCAAGCTACTaGCTTAAAATCCAAGCTCCCCAAATACTCAATTTCTGTCCCTTT | + |
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Preference number: 5 (lower is better) Translates to: CGRKGFIQLGASASY*LKIQAPQILNFCPF Trigger: AAAGGGACAGAAATTGAGTATTTGGGGAGCTTGGATTTTAAGGCAGTAGCTTGCTGATGCTCCCAGCTGAATAAAGCCCTTCCTTCCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647830.1 |
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| CDS GCA 90 bp | CATGGCTCCCGGATTGAGCCCATGCCACACTTGCATGGGTACATGTaGCAGTTTTGTTATATCTTTAACTATATTTTTAACTACTTGCCC | + |
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Preference number: 5 (lower is better) Translates to: HGSRIEPMPHLHGYM*QFCYIFNYIFNYLP Trigger: GGGCAAGTAGTTAAAAATATAGTTAAAGATATAACAAAACTGGCACATGTACCCATGCAAGTGTGGCATGGGCTCAATCCGGGAGCCATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000647830.1 |
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| CDS TCA 90 bp | CTCATGAGCCATCTTGTGCCTAAGTGGTGGGTCTATAGTATTGTATaGTTCTTTCAGGGGGCCATTCATTATTTTCTAATCACCTATGGC | + |
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Preference number: 5 (lower is better) Translates to: LMSHLVPKWWVYSIV*FFQGAIHYFLITYG Trigger: GCCATAGGTGATTAGAAAATAATGAATGGCCCCCTGAAAGAATCATACAATACTATAGACCCACCACTTAGGCACAAGATGGCTCATGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000647830.1 |
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| CDS CAA 90 bp | CCGGGTGTGACCGGAACAAGGCTTGTCGTCTTCTTCAGAGTCACTTaGCAAGGGTTGGCAAAGCTGCTCCCATCCACGTACAGCTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: PGVTGTRLVVFFRVT*QGLAKLLPSTYSSQ Trigger: CTGGGAGCTGTACGTGGATGGGAGCAGCTTTGCCAACCCTTGCAAAGTGACTCTGAAGAAGACGACAAGCCTTGTTCCGGTCACACCCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647830.1 |
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| CDS TCA 72 bp | GCTTCGGCCATGCGTGAACCAGTCAGCTTCCGGGTGTaGCCGGAACAAGGCTTGTCGTCTTCTTCAGAGTCA | + |
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Preference number: 6 (lower is better) Translates to: ASAMREPVSFRV*PEQGLSSSSES Trigger: TGACTCTGAAGAAGACGACAAGCCTTGTTCCGGTCACACCCGGAAGCTGACTGGTTCACGCATGGCCGAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647830.1 |
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| CDS CCA 72 bp | GGCTTGTCGTCTTCTTCAGAGTCACTTTGCAAGGGTTaGCAAAGCTGCTCCCATCCACGTACAGCTCCCAGT | + |
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Preference number: 6 (lower is better) Translates to: GLSSSSESLCKG*QSCSHPRTAPS Trigger: ACTGGGAGCTGTACGTGGATGGGAGCAGCTTTGCCAACCCTTGCAAAGTGACTCTGAAGAAGACGACAAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647830.1 |
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| CDS CAA 72 bp | AGGCTTGTCGTCTTCTTCAGAGTCACTTTGCAAGGGTaGGCAAAGCTGCTCCCATCCACGTACAGCTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: RLVVFFRVTLQG*AKLLPSTYSSQ Trigger: CTGGGAGCTGTACGTGGATGGGAGCAGCTTTGCCAACCCTTGCAAAGTGACTCTGAAGAAGACGACAAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647830.1 |
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| CDS GCA 72 bp | CCGGAACAAGGCTTGTCGTCTTCTTCAGAGTCACTTTaGAAGGGTTGGCAAAGCTGCTCCCATCCACGTACA | + |
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Preference number: 6 (lower is better) Translates to: PEQGLSSSSESL*KGWQSCSHPRT Trigger: TGTACGTGGATGGGAGCAGCTTTGCCAACCCTTGCAAAGTGACTCTGAAGAAGACGACAAGCCTTGTTCCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647830.1 |
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| CDS GCA 72 bp | ATTGATTTGAGCAAGCAGGCGGTACATGACAGGGGCTaGATGCACCAGTGGTCAGAGAGAAACAGAACAGGG | + |
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Preference number: 6 (lower is better) Translates to: IDLSKQAVHDRG*MHQWSERNRTG Trigger: CCCTGTTCTGTTTCTCTCTGACCACTGGTGCATGCAGCCCCTGTCATGTACCGCCTGCTTGCTCAAATCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647830.1 |
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| CDS CAA 72 bp | ATTGCTGGGAACCAATTTGCAAACATGGCTCCCGGATaGAGCCCATGCCACACTTGCATGGGTACATGTGCC | + |
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Preference number: 6 (lower is better) Translates to: IAGNQFANMAPG*SPCHTCMGTCA Trigger: GGCACATGTACCCATGCAAGTGTGGCATGGGCTCAATCCGGGAGCCATGTTTGCAAATTGGTTCCCAGCAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647830.1 |
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| CDS CAA 90 bp | ACCGGAACAAGGCTTGTCGTCTTCTTCAGAGTCACTTTGCAAGGGTaGGCAAAGCTGCTCCCATCCACGTACAGCTCCCAGTCTACTGAT | + |
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Preference number: 6 (lower is better) Translates to: TGTRLVVFFRVTLQG*AKLLPSTYSSQSTD Trigger: ATCAGTAGACTGGGAGCTGTACGTGGATGGGAGCAGCTTTGCCAACCCTTGCAAAGTGACTCTGAAGAAGACGACAAGCCTTGTTCCGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647830.1 |
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| CDS GCA 72 bp | TCTTCTTCAGAGTCACTTTGCAAGGGTTGGCAAAGCTaGTCCCATCCACGTACAGCTCCCAGTCTACTGATG | + |
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Preference number: 6 (lower is better) Translates to: SSSESLCKGWQS*SHPRTAPSLLM Trigger: CATCAGTAGACTGGGAGCTGTACGTGGATGGGAGCAGCTTTGCCAACCCTTGCAAAGTGACTCTGAAGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647830.1 |
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| CDS GCA 72 bp | AACCAATTTGCAAACATGGCTCCCGGATTGAGCCCATaGCACACTTGCATGGGTACATGTGCCAGTTTTGTT | + |
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Preference number: 6 (lower is better) Translates to: NQFANMAPGLSP*HTCMGTCASFV Trigger: AACAAAACTGGCACATGTACCCATGCAAGTGTGGCATGGGCTCAATCCGGGAGCCATGTTTGCAAATTGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647830.1 |
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| CDS CAA 72 bp | TGCAAACATGGCTCCCGGATTGAGCCCATGCCACACTaGCATGGGTACATGTGCCAGTTTTGTTATATCTTT | + |
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Preference number: 6 (lower is better) Translates to: CKHGSRIEPMPH*HGYMCQFCYIF Trigger: AAAGATATAACAAAACTGGCACATGTACCCATGCAAGTGTGGCATGGGCTCAATCCGGGAGCCATGTTTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647830.1 |
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| CDS GCA 72 bp | AAGGGCTTTATTCAGCTGGGAGCATCAGCAAGCTACTaGCTTAAAATCCAAGCTCCCCAAATACTCAATTTC | + |
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Preference number: 6 (lower is better) Translates to: KGFIQLGASASY*LKIQAPQILNF Trigger: GAAATTGAGTATTTGGGGAGCTTGGATTTTAAGGCAGTAGCTTGCTGATGCTCCCAGCTGAATAAAGCCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647830.1 |
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| CDS TCA 72 bp | ATCAGAGTCTCTTGCCGGGCAAGAACAGTCAAGGCTTaGCCGGTTTTATTAGTAATAATTTCTAAAACCGCT | + |
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Preference number: 6 (lower is better) Translates to: IRVSCRARTVKA*PVLLVIISKTA Trigger: AGCGGTTTTAGAAATTATTACTAATAAAACCGGTCAAGCCTTGACTGTTCTTGCCCGGCAAGAGACTCTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647830.1 |
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| CDS CAA 72 bp | TATATTTTGATAGATAAAATTTCTCATCAGAGTCTCTaGCCGGGCAAGAACAGTCAAGGCTTGACCGGTTTT | + |
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Preference number: 6 (lower is better) Translates to: YILIDKISHQSL*PGKNSQGLTGF Trigger: AAAACCGGTCAAGCCTTGACTGTTCTTGCCCGGCAAGAGACTCTGATGAGAAATTTTATCTATCAAAATATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647830.1 |
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