RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDSN (Homo sapiens)

Ensembl gene IDs: ENSG00000137197, ENSG00000204539, ENSG00000206460

Ensembl transcript IDs: ENST00000259726.6, ENST00000376288.3, ENST00000383531.4, ENST00000418599.2, ENST00000445893.2, ENST00000457875.2

Found 318 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGGGGAAGGAGGGAAACTaGGCTAACCCTATGCCTGGG +
Preference number: 2 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQGKEGN*ANPMPG
Trigger: CCCAGGCATAGGGTTAGCTCAGTTTCCCTCCTTCCC...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
3UTR-3UTR TCA 90 bp GGTATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCGGGAAGGAGGGAAACTaGGCTAACCCTATGCCTGGG +
Preference number: 2 (lower is better)
Translates to: GITSSGVRGALRAFQGFPGKEGN*ANPMPG
Trigger: CCCAGGCATAGGGTTAGCTCAGTTTCCCTCCTTCCC...GGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTATACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
3UTR-3UTR CCA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGGCAGAACCACTCTTTTaGGAAGGAGGGAAACTGAGC +
Preference number: 2 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQAEPLF*EGGKLS
Trigger: GCTCAGTTTCCCTCCTTCCCAAAAGAGTGGTTCTGC...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
3UTR-3UTR TCA 90 bp ATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGTGGGAAGGAGGGAAACTaGGCTAACCCTATGCCTGGG +
Preference number: 2 (lower is better)
Translates to: ITSSGVRGALRAFQGFPSGKEGN*ANPMPG
Trigger: CCCAGGCATAGGGTTAGCTCAGTTTCCCTCCTTCCC...ACTGGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
3UTR-3UTR TCA 90 bp TATTGTCTTCCTCCTCTGTGGGAGCAGCTGGAAGGTAGAAGAGAAACACAGCCCGCGTCAGAGGTGCTCTaGGAGCATTTCAGGGGTTTC +
Preference number: 2 (lower is better)
Translates to: YCLPPLWEQLEGRRETQPASEVL*EHFRGF
Trigger: GAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGC...GGGCTGTGTTTCTCTTCTACCTTCCAGCTGCTCCCACAGAGGAGGAAGACAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376288.3
3UTR-3UTR GCA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGTTTGTGCCCAAGGCATaGACACACACAACAGTTGAC +
Preference number: 2 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQFVPKA*THTTVD
Trigger: GTCAACTGTTGTGTGTGTGCATGCCTTGGGCACAAA...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
3UTR-3UTR TCA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGAGGGAAGGAGGGAAACTaGGCTAACCCTATGCCTGGG +
Preference number: 2 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRGKEGN*ANPMPG
Trigger: CCCAGGCATAGGGTTAGCTCAGTTTCCCTCCTTCCC...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
3UTR-3UTR CCA 90 bp TATTGTCTTCCTCCTCTGTGGGAGCAGCTGGAAGGTAGAAGAGAAACACAGCCCGCAGAACCACTCTTTTaGGAAGGAGGGAAACTGAGC +
Preference number: 2 (lower is better)
Translates to: YCLPPLWEQLEGRRETQPAEPLF*EGGKLS
Trigger: GCTCAGTTTCCCTCCTTCCCAAAAGAGTGGTTCTGC...GGGCTGTGTTTCTCTTCTACCTTCCAGCTGCTCCCACAGAGGAGGAAGACAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376288.3
3UTR-3UTR CCA 90 bp GGTATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCGCAGAACCACTCTTTTaGGAAGGAGGGAAACTGAGC +
Preference number: 2 (lower is better)
Translates to: GITSSGVRGALRAFQGFPAEPLF*EGGKLS
Trigger: GCTCAGTTTCCCTCCTTCCCAAAAGAGTGGTTCTGC...GGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
3UTR-3UTR CCA 90 bp TATTGTCTTCCTCCTCTGTGGGAGCAGCTGGAAGGTAGAAGAGAAACACAGCCCGAGAGTCTGCAACCTTaGGGTAGTGGAGAAAGCAGA +
Preference number: 2 (lower is better)
Translates to: YCLPPLWEQLEGRRETQPESLQP*GSGESR
Trigger: TCTGCTTTCTCCACTACCCCAAGGTTGCAGACTCTC...GGGCTGTGTTTCTCTTCTACCTTCCAGCTGCTCCCACAGAGGAGGAAGACAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376288.3
3UTR-3UTR TCA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGAGCGTCAGAGGTGCTCTaGGAGCATTTCAGGGGTTTC +
Preference number: 2 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRASEVL*EHFRGF
Trigger: GAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGC...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
3UTR-3UTR TCA 90 bp AAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGAACACAGAGACACCCAGGGAATCATCTaGGCACTGAGGGAAGTGGCC +
Preference number: 2 (lower is better)
Translates to: KVEEKHSPLLKENEEHRDTQGII*ALREVA
Trigger: GGCCACTTCCCTCAGTGCTCAGATGATTCCCTGGGT...GTCTCTGTGTTCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376288.3
3UTR-3UTR GCA 90 bp TATTGTCTTCCTCCTCTGTGGGAGCAGCTGGAAGGTAGAAGAGAAACACAGCCCTTTGTGCCCAAGGCATaGACACACACAACAGTTGAC +
Preference number: 2 (lower is better)
Translates to: YCLPPLWEQLEGRRETQPFVPKA*THTTVD
Trigger: GTCAACTGTTGTGTGTGTGCATGCCTTGGGCACAAA...GGGCTGTGTTTCTCTTCTACCTTCCAGCTGCTCCCACAGAGGAGGAAGACAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376288.3
3UTR-3UTR GCA 90 bp GGTATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCTTTGTGCCCAAGGCATaGACACACACAACAGTTGAC +
Preference number: 2 (lower is better)
Translates to: GITSSGVRGALRAFQGFPFVPKA*THTTVD
Trigger: GTCAACTGTTGTGTGTGTGCATGCCTTGGGCACAAA...GGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTATACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
3UTR-3UTR CCA 90 bp ATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGTGCAGAACCACTCTTTTaGGAAGGAGGGAAACTGAGC +
Preference number: 2 (lower is better)
Translates to: ITSSGVRGALRAFQGFPSAEPLF*EGGKLS
Trigger: GCTCAGTTTCCCTCCTTCCCAAAAGAGTGGTTCTGC...ACTGGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
3UTR-3UTR TCA 90 bp AGGAGCTGGAAGGTAGAAGAGAAATACAGCCCGCTTTTGAAGGAAAATGAGGAAGCGTCAGAGGTGCTCTaGGAGCATTTCAGGGGTTTC +
Preference number: 2 (lower is better)
Translates to: RSWKVEEKYSPLLKENEEASEVL*EHFRGF
Trigger: GAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGC...TTCCTCATTTTCCTTCAAAAGCGGGCTGTATTTCTCTTCTACCTTCCAGCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259726.6
3UTR-3UTR CCA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGAGCAGAACCACTCTTTTaGGAAGGAGGGAAACTGAGC +
Preference number: 2 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRAEPLF*EGGKLS
Trigger: GCTCAGTTTCCCTCCTTCCCAAAAGAGTGGTTCTGC...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
3UTR-3UTR GCA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGATTTGTGCCCAAGGCATaGACACACACAACAGTTGAC +
Preference number: 2 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRFVPKA*THTTVD
Trigger: GTCAACTGTTGTGTGTGTGCATGCCTTGGGCACAAA...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
3UTR-3UTR CCA 90 bp AGGAGCTGGAAGGTAGAAGAGAAATACAGCCCGCTTTTGAAGGAAAATGAGGAAGAGAGTCTGCAACCTTaGGGTAGTGGAGAAAGCAGA +
Preference number: 2 (lower is better)
Translates to: RSWKVEEKYSPLLKENEEESLQP*GSGESR
Trigger: TCTGCTTTCTCCACTACCCCAAGGTTGCAGACTCTC...TTCCTCATTTTCCTTCAAAAGCGGGCTGTATTTCTCTTCTACCTTCCAGCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259726.6
3UTR-3UTR GCA 90 bp AAGGTAGAAGAGAAATACAGCCCGCTTTTGAAGGAAAATGAGGAACACAGAGACTTTGTGCCCAAGGCATaGACACACACAACAGTTGAC +
Preference number: 2 (lower is better)
Translates to: KVEEKYSPLLKENEEHRDFVPKA*THTTVD
Trigger: GTCAACTGTTGTGTGTGTGCATGCCTTGGGCACAAA...GTCTCTGTGTTCCTCATTTTCCTTCAAAAGCGGGCTGTATTTCTCTTCTACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259726.6
3UTR-3UTR TCA 90 bp AAGGTAGAAGAGAAATACAGCCCGCTTTTGAAGGAAAATGAGGAACACAGAGACTCAAGAGAGGAGCTTTaGATCTACCATTTTGAGAAG +
Preference number: 2 (lower is better)
Translates to: KVEEKYSPLLKENEEHRDSREEL*IYHFEK
Trigger: CTTCTCAAAATGGTAGATTCAAAGCTCCTCTCTTGA...GTCTCTGTGTTCCTCATTTTCCTTCAAAAGCGGGCTGTATTTCTCTTCTACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259726.6
3UTR-3UTR CAA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGGCTGAGATAAGGGCCTaGAGAGGCAATGGGTGTGTT +
Preference number: 3 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQAEIRA*RGNGCV
Trigger: AACACACCCATTGCCTCTCAAGGCCCTTATCTCAGC...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
3UTR-3UTR CAA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGAGTGTATGTGCTTGTTaGTGCCCAAGGCATGCACAC +
Preference number: 3 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQSVCAC*CPRHAH
Trigger: GTGTGCATGCCTTGGGCACAAACAAGCACATACACT...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
3UTR-3UTR CAA 90 bp GGTATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGTGTATGTGCTTGTTaGTGCCCAAGGCATGCACAC +
Preference number: 3 (lower is better)
Translates to: GITSSGVRGALRAFQGFPSVCAC*CPRHAH
Trigger: GTGTGCATGCCTTGGGCACAAACAAGCACATACACT...GGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
3UTR-3UTR CAA 90 bp ATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGTAGTGTATGTGCTTGTTaGTGCCCAAGGCATGCACAC +
Preference number: 3 (lower is better)
Translates to: ITSSGVRGALRAFQGFPSSVCAC*CPRHAH
Trigger: GTGTGCATGCCTTGGGCACAAACAAGCACATACACT...ACTGGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
3UTR-3UTR CAA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGTTGACTTTGCTTTATTaGGTAAAGGGGAAGAGGAAG +
Preference number: 3 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQLTLLY*VKGKRK
Trigger: CTTCCTCTTCCCCTTTACCAAATAAAGCAAAGTCAA...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
3UTR-3UTR CAA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGGATGATGGTTTGACTTaGCTTTATTTGGTAAAGGGG +
Preference number: 3 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQDDGLT*LYLVKG
Trigger: CCCCTTTACCAAATAAAGCAAAGTCAAACCATCATC...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
3UTR CCA 72 bp AAGGAGGAAGGGGTGATAAGAGAGAGTCTGCAACCTTaGGGTAGTGGAGAAAGCAGAACCACTCTTTTGGGA +
Preference number: 3 (lower is better)
Translates to: KEEGVIRESLQP*GSGESRTTLLG
Trigger: TCCCAAAAGAGTGGTTCTGCTTTCTCCACTACCCCAAGGTTGCAGACTCTCTCTTATCACCCCTTCCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259726.6
ENST00000376288.3
3UTR-3UTR CAA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGAGCTGAGATAAGGGCCTaGAGAGGCAATGGGTGTGTT +
Preference number: 3 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRAEIRA*RGNGCV
Trigger: AACACACCCATTGCCTCTCAAGGCCCTTATCTCAGC...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
3UTR-3UTR CAA 90 bp AGCAGCTGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGAAAGTGTATGTGCTTGTTaGTGCCCAAGGCATGCACAC +
Preference number: 3 (lower is better)
Translates to: SSWKVEEKHSPLLKENEESVCAC*CPRHAH
Trigger: GTGTGCATGCCTTGGGCACAAACAAGCACATACACT...TTCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCAGCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376288.3
3UTR-3UTR CAA 90 bp AGGAGCTGGAAGGTAGAAGAGAAATACAGCCCGCTTTTGAAGGAAAATGAGGAAAGCAGAACCACTCTTTaGGGAAGGAGGGAAACTGAG +
Preference number: 3 (lower is better)
Translates to: RSWKVEEKYSPLLKENEESRTTL*GRRETE
Trigger: CTCAGTTTCCCTCCTTCCCAAAAGAGTGGTTCTGCT...TTCCTCATTTTCCTTCAAAAGCGGGCTGTATTTCTCTTCTACCTTCCAGCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259726.6
3UTR CCA 72 bp CAAATATTTATTGTCTTCCTCCTCTGTGGGAGCAGCTaGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAG +
Preference number: 3 (lower is better)
Translates to: QIFIVFLLCGSS*KVEEKHSPLLK
Trigger: CTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCAGCTGCTCCCACAGAGGAGGAAGACAATAAATATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376288.3
3UTR-3UTR CAA 90 bp AGCAGCTGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGAAGATGATGGTTTGACTTaGCTTTATTTGGTAAAGGGG +
Preference number: 3 (lower is better)
Translates to: SSWKVEEKHSPLLKENEEDDGLT*LYLVKG
Trigger: CCCCTTTACCAAATAAAGCAAAGTCAAACCATCATC...TTCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCAGCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376288.3
3UTR-3UTR CAA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGAGATGATGGTTTGACTTaGCTTTATTTGGTAAAGGGG +
Preference number: 3 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRDDGLT*LYLVKG
Trigger: CCCCTTTACCAAATAAAGCAAAGTCAAACCATCATC...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
3UTR-3UTR CAA 90 bp AAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGAACACAGAGACTTGACTTTGCTTTATTaGGTAAAGGGGAAGAGGAAG +
Preference number: 3 (lower is better)
Translates to: KVEEKHSPLLKENEEHRDLTLLY*VKGKRK
Trigger: CTTCCTCTTCCCCTTTACCAAATAAAGCAAAGTCAA...GTCTCTGTGTTCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376288.3
3UTR-3UTR CAA 90 bp AGGAGCTGGAAGGTAGAAGAGAAATACAGCCCGCTTTTGAAGGAAAATGAGGAAGATGATGGTTTGACTTaGCTTTATTTGGTAAAGGGG +
Preference number: 3 (lower is better)
Translates to: RSWKVEEKYSPLLKENEEDDGLT*LYLVKG
Trigger: CCCCTTTACCAAATAAAGCAAAGTCAAACCATCATC...TTCCTCATTTTCCTTCAAAAGCGGGCTGTATTTCTCTTCTACCTTCCAGCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259726.6
CDS-3UTR CCA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGGAGAGCAGGGTCCCTTaGAGCCCGTGGAGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQESRVP*SPWSRL
Trigger: GAGGCGGCTCCACGGGCTCCAAGGGACCCTGCTCTC...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGGAAGGAGCCGGTGCCTaGTGGGGAGCAGGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQEGAGA*WGAGAL
Trigger: CAGAGCCCCTGCTCCCCACCAGGCACCGGCTCCTTC...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGGCGGAGGGATCAGGATaGGGAGAGCCATCGGGGCCC +
Preference number: 4 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQAEGSG*GEPSGP
Trigger: GGGCCCCGATGGCTCTCCCCATCCTGATCCCTCCGC...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR GCA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGACGCCCCATCCAGGGTaGCCGAGACGAGCCCATCTC +
Preference number: 4 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQTPHPG*PRRAHL
Trigger: GAGATGGGCTCGTCTCGGGCACCCTGGATGGGGCGT...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR GCA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGGGGGCACCAGAACCGTaGTGGTCCACCACCACCACC +
Preference number: 4 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQGAPEP*WSTTTT
Trigger: GGTGGTGGTGGTGGACCAGCACGGTTCTGGTGCCCC...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGCCGCCTCCACAGAGCTaGACCCCACCAGTCCCCACT +
Preference number: 4 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQPPPQS*TPPVPT
Trigger: AGTGGGGACTGGTGGGGTCCAGCTCTGTGGAGGCGG...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGGTCCCTTGGAGCCCGTaGAGCCGCCTCCACAGAGCT +
Preference number: 4 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQVPWSP*SRLHRA
Trigger: AGCTCTGTGGAGGCGGCTCCACGGGCTCCAAGGGAC...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR TCA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGGACGCTGGTTGGAGCTaGCGCTTTGGCCACTGCTGG +
Preference number: 4 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQDAGWS*RFGHCW
Trigger: CCAGCAGTGGCCAAAGCGTCAGCTCCAACCAGCGTC...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR GCA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGCCGAGTGAGAGCTGCTaGTCCCCAGCTGGGAGGAAC +
Preference number: 4 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQPSESC*SPAGRN
Trigger: GTTCCTCCCAGCTGGGGAGCAGCAGCTCTCACTCGG...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR GCA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGTTCCCGAGTGAGAGCTaGTGCTCCCCAGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQFPSES*CSPAGR
Trigger: CCTCCCAGCTGGGGAGCAGCAGCTCTCACTCGGGAA...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR GCA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGCGATGGGCCCTCCACTaGAGGGAGAGTCGGGGATGT +
Preference number: 4 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQRWALH*RESRGC
Trigger: ACATCCCCGACTCTCCCTGCAGTGGAGGGCCCATCG...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGCTGCTGCTCCCCAGCTaGGAGGAACCGGATGCACCT +
Preference number: 4 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQLLLPS*EEPDAP
Trigger: AGGTGCATCCGGTTCCTCCCAGCTGGGGAGCAGCAG...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp CTTCCTCCTCTGTGGGAGCAGCTGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAGAGCAGGGTCCCTTaGAGCCCGTGGAGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: LPPLWEQLEGRRETQPAFESRVP*SPWSRL
Trigger: GAGGCGGCTCCACGGGCTCCAAGGGACCCTGCTCTC...AAAAGCGGGCTGTGTTTCTCTTCTACCTTCCAGCTGCTCCCACAGAGGAGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376288.3
CDS-3UTR TCA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGCCGACTGGCTGGGGATaGTGGGGTTGCTGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQPTGWG*WGCWRS
Trigger: ACTTCTCCAGCAACCCCATCATCCCCAGCCAGTCGG...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR GCA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGTTGGGGGACAGGGCTTaGCTGGAAGGCCACCATTGC +
Preference number: 4 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQLGDRA*LEGHHC
Trigger: GCAATGGTGGCCTTCCAGGCAAGCCCTGTCCCCCAA...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGCTTAGCCAAGGTCCCTaGCAGGAGGAGACCAGCCAG +
Preference number: 4 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQLSQGP*QEETSQ
Trigger: CTGGCTGGTCTCCTCCTGCCAGGGACCTTGGCTAAG...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGCACCCTGGGCAATGCTaGATCCGCTGGAGCTACCAC +
Preference number: 4 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQHPGQC*IRWSYH
Trigger: GTGGTAGCTCCAGCGGATCCAGCATTGCCCAGGGTG...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGCCTGCAGAACCACCCTaGGCAATGCTGGATCCGCTG +
Preference number: 4 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQPAEPP*AMLDPL
Trigger: CAGCGGATCCAGCATTGCCCAGGGTGGTTCTGCAGG...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGGAGGAAGCTGCCGACTaGCTGGGGATGATGGGGTTG +
Preference number: 4 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQEEAAD*LGMMGL
Trigger: CAACCCCATCATCCCCAGCCAGTCGGCAGCTTCCTC...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp GGTATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCGAGAGCAGGGTCCCTTaGAGCCCGTGGAGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: GITSSGVRGALRAFQGFPESRVP*SPWSRL
Trigger: GAGGCGGCTCCACGGGCTCCAAGGGACCCTGCTCTC...GGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTATACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp GGTATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCGCGGAGGGATCAGGATaGGGAGAGCCATCGGGGCCC +
Preference number: 4 (lower is better)
Translates to: GITSSGVRGALRAFQGFPAEGSG*GEPSGP
Trigger: GGGCCCCGATGGCTCTCCCCATCCTGATCCCTCCGC...GGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTATACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGTCAGGGTCAGCTAGCTaGGGCCCCAGAGGCTTCACT +
Preference number: 4 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQSGSAS*GPRGFT
Trigger: AGTGAAGCCTCTGGGGCCCCAGCTAGCTGACCCTGA...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR TCA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGATCCGGAGGAGTAGCTaGCCTGGGAATACCCCGTTC +
Preference number: 4 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQIRRSS*PGNTPF
Trigger: GAACGGGGTATTCCCAGGTCAGCTACTCCTCCGGAT...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR GCA 90 bp GGTATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCACGCCCCATCCAGGGTaGCCGAGACGAGCCCATCTC +
Preference number: 4 (lower is better)
Translates to: GITSSGVRGALRAFQGFPTPHPG*PRRAHL
Trigger: GAGATGGGCTCGTCTCGGGCACCCTGGATGGGGCGT...GGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTATACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR GCA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGAACCACCCTGGGCAATaGTGGATCCGCTGGAGCTAC +
Preference number: 4 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQNHPGQ*WIRWSY
Trigger: GTAGCTCCAGCGGATCCAGCATTGCCCAGGGTGGTT...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR GCA 90 bp CTTCCTCCTCTGTGGGAGCAGCTGGAAGGTAGAAGAGAAACACAGCCCGCTTTTCCGAGTGAGAGCTGCTaGTCCCCAGCTGGGAGGAAC +
Preference number: 4 (lower is better)
Translates to: LPPLWEQLEGRRETQPAFPSESC*SPAGRN
Trigger: GTTCCTCCCAGCTGGGGAGCAGCAGCTCTCACTCGG...AAAAGCGGGCTGTGTTTCTCTTCTACCTTCCAGCTGCTCCCACAGAGGAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376288.3
CDS-3UTR GCA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGAATGGCCGAGGAAGCTaGCGACTGGCTGGGGATGAT +
Preference number: 4 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQNGRGS*RLAGDD
Trigger: ATCATCCCCAGCCAGTCGGCAGCTTCCTCGGCCATT...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR GCA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGGGATCTTTCCAGCACTaGTGGAGCCACAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQGSFQH*WSHRAW
Trigger: CCAAGCCCTGTGGCTCCAGCAGTGCTGGAAAGATCC...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGCAATGCTGGATCCGCTaGAGCTACCACTGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQQCWIR*SYHWSH
Trigger: GTGGCTCCAGTGGTAGCTCCAGCGGATCCAGCATTG...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGGTCTACAGAGGTGATTaGGGGACAGGGCTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQVYRGD*GTGLAW
Trigger: CCAGGCAAGCCCTGTCCCCCAATCACCTCTGTAGAC...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGATTTGCCCTCAGAGATaGGGGGCCCAGCTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQICPQR*GAQLQR
Trigger: CCTTTGCAGCTGGGCCCCCCATCTCTGAGGGCAAAT...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp GGTATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCCCGCCTCCACAGAGCTaGACCCCACCAGTCCCCACT +
Preference number: 4 (lower is better)
Translates to: GITSSGVRGALRAFQGFPPPPQS*TPPVPT
Trigger: AGTGGGGACTGGTGGGGTCCAGCTCTGTGGAGGCGG...GGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTATACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp GGTATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCGTCCCTTGGAGCCCGTaGAGCCGCCTCCACAGAGCT +
Preference number: 4 (lower is better)
Translates to: GITSSGVRGALRAFQGFPVPWSP*SRLHRA
Trigger: AGCTCTGTGGAGGCGGCTCCACGGGCTCCAAGGGAC...GGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTATACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp ATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGTGAAGGAGCCGGTGCCTaGTGGGGAGCAGGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: ITSSGVRGALRAFQGFPSEGAGA*WGAGAL
Trigger: CAGAGCCCCTGCTCCCCACCAGGCACCGGCTCCTTC...ACTGGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR TCA 90 bp GGTATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCGACGCTGGTTGGAGCTaGCGCTTTGGCCACTGCTGG +
Preference number: 4 (lower is better)
Translates to: GITSSGVRGALRAFQGFPDAGWS*RFGHCW
Trigger: CCAGCAGTGGCCAAAGCGTCAGCTCCAACCAGCGTC...GGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTATACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR TCA 90 bp CTTCCTCCTCTGTGGGAGCAGCTGGAAGGTAGAAGAGAAACACAGCCCGCTTTTCCGACTGGCTGGGGATaGTGGGGTTGCTGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: LPPLWEQLEGRRETQPAFPTGWG*WGCWRS
Trigger: ACTTCTCCAGCAACCCCATCATCCCCAGCCAGTCGG...AAAAGCGGGCTGTGTTTCTCTTCTACCTTCCAGCTGCTCCCACAGAGGAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376288.3
CDS-3UTR TCA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGGCGTCAGAGGTGCTCTaGGAGCATTTCAGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQASEVL*EHFRGF
Trigger: GAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGC...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR TCA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGGTCCCCACAGTTTACTaGGCCATCTGTCCAGGATCC +
Preference number: 4 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQVPTVY*AICPGS
Trigger: GGATCCTGGACAGATGGCTCAGTAAACTGTGGGGAC...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR GCA 90 bp ATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGTACGCCCCATCCAGGGTaGCCGAGACGAGCCCATCTC +
Preference number: 4 (lower is better)
Translates to: ITSSGVRGALRAFQGFPSTPHPG*PRRAHL
Trigger: GAGATGGGCTCGTCTCGGGCACCCTGGATGGGGCGT...ACTGGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR GCA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGCACTGGAAATGGAGCTaGCAGAACTGCTGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQHWKWS*QNCWSH
Trigger: GTGGCTCCAGCAGTTCTGGCAGCTCCATTTCCAGTG...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR GCA 90 bp GGTATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCCCGAGTGAGAGCTGCTaGTCCCCAGCTGGGAGGAAC +
Preference number: 4 (lower is better)
Translates to: GITSSGVRGALRAFQGFPPSESC*SPAGRN
Trigger: GTTCCTCCCAGCTGGGGAGCAGCAGCTCTCACTCGG...GGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTATACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR GCA 90 bp GGTATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCTTCCCGAGTGAGAGCTaGTGCTCCCCAGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: GITSSGVRGALRAFQGFPFPSES*CSPAGR
Trigger: CCTCCCAGCTGGGGAGCAGCAGCTCTCACTCGGGAA...GGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTATACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR GCA 90 bp GGTATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCCGATGGGCCCTCCACTaGAGGGAGAGTCGGGGATGT +
Preference number: 4 (lower is better)
Translates to: GITSSGVRGALRAFQGFPRWALH*RESRGC
Trigger: ACATCCCCGACTCTCCCTGCAGTGGAGGGCCCATCG...GGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTATACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR GCA 90 bp ATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGTGGGGCACCAGAACCGTaGTGGTCCACCACCACCACC +
Preference number: 4 (lower is better)
Translates to: ITSSGVRGALRAFQGFPSGAPEP*WSTTTT
Trigger: GGTGGTGGTGGTGGACCAGCACGGTTCTGGTGCCCC...ACTGGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp GGTATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCCTGCTGCTCCCCAGCTaGGAGGAACCGGATGCACCT +
Preference number: 4 (lower is better)
Translates to: GITSSGVRGALRAFQGFPLLLPS*EEPDAP
Trigger: AGGTGCATCCGGTTCCTCCCAGCTGGGGAGCAGCAG...GGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTATACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGGAACTACAGGGACGCTaGTTGGAGCTGACGCTTTGG +
Preference number: 4 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQELQGR*LELTLW
Trigger: CCAAAGCGTCAGCTCCAACCAGCGTCCCTGTAGTTC...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp ATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGTGTCCCTTGGAGCCCGTaGAGCCGCCTCCACAGAGCT +
Preference number: 4 (lower is better)
Translates to: ITSSGVRGALRAFQGFPSVPWSP*SRLHRA
Trigger: AGCTCTGTGGAGGCGGCTCCACGGGCTCCAAGGGAC...ACTGGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp GGTATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCTGGAGCCACAGGGCTTaGCACCAGCGGAGGGATCAG +
Preference number: 4 (lower is better)
Translates to: GITSSGVRGALRAFQGFPWSHRA*HQRRDQ
Trigger: CTGATCCCTCCGCTGGTGCCAAGCCCTGTGGCTCCA...GGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTATACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGCTAGGATATCCCGGATaGAGCGGCAGGGGATCTTTC +
Preference number: 4 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQLGYPG*SGRGSF
Trigger: GAAAGATCCCCTGCCGCTCCATCCGGGATATCCTAG...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGCCCAGAGGCTTCACTTaGGCTAGGATATCCCGGATG +
Preference number: 4 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQPRGFT*ARISRM
Trigger: CATCCGGGATATCCTAGCCCAAGTGAAGCCTCTGGG...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR TCA 90 bp ATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGTGACGCTGGTTGGAGCTaGCGCTTTGGCCACTGCTGG +
Preference number: 4 (lower is better)
Translates to: ITSSGVRGALRAFQGFPSDAGWS*RFGHCW
Trigger: CCAGCAGTGGCCAAAGCGTCAGCTCCAACCAGCGTC...ACTGGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR TCA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGACAGACATGCAAGGGTaGCCAGAAGAGCTGGACTTG +
Preference number: 4 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQTDMQG*PEELDL
Trigger: CAAGTCCAGCTCTTCTGGTCACCCTTGCATGTCTGT...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR TCA 90 bp CTTCCTCCTCTGTGGGAGCAGCTGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGGGAAGGAGGGAAACTaGGCTAACCCTATGCCTGGG +
Preference number: 4 (lower is better)
Translates to: LPPLWEQLEGRRETQPAFGKEGN*ANPMPG
Trigger: CCCAGGCATAGGGTTAGCTCAGTTTCCCTCCTTCCC...AAAAGCGGGCTGTGTTTCTCTTCTACCTTCCAGCTGCTCCCACAGAGGAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376288.3
CDS-3UTR GCA 90 bp ATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGTTTCCCGAGTGAGAGCTaGTGCTCCCCAGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: ITSSGVRGALRAFQGFPSFPSES*CSPAGR
Trigger: CCTCCCAGCTGGGGAGCAGCAGCTCTCACTCGGGAA...ACTGGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR GCA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGACTGAAAGCTGCTGCTaGTGCTCGAATGAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQTESCC*CSNESC
Trigger: GCAGCTCTCATTCGAGCAGCAGCAGCAGCTTTCAGT...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR GCA 90 bp ATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGTCGATGGGCCCTCCACTaGAGGGAGAGTCGGGGATGT +
Preference number: 4 (lower is better)
Translates to: ITSSGVRGALRAFQGFPSRWALH*RESRGC
Trigger: ACATCCCCGACTCTCCCTGCAGTGGAGGGCCCATCG...ACTGGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR GCA 90 bp GGTATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCTTGGGGGACAGGGCTTaGCTGGAAGGCCACCATTGC +
Preference number: 4 (lower is better)
Translates to: GITSSGVRGALRAFQGFPLGDRA*LEGHHC
Trigger: GCAATGGTGGCCTTCCAGGCAAGCCCTGTCCCCCAA...GGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTATACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR GCA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGAGGAGGAGACAGACATaGAAGGGTGACCAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQRRRQT*KGDQKS
Trigger: GCTCTTCTGGTCACCCTTGCATGTCTGTCTCCTCCT...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp GGTATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCCTTAGCCAAGGTCCCTaGCAGGAGGAGACCAGCCAG +
Preference number: 4 (lower is better)
Translates to: GITSSGVRGALRAFQGFPLSQGP*QEETSQ
Trigger: CTGGCTGGTCTCCTCCTGCCAGGGACCTTGGCTAAG...GGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTATACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGTTCTGGCACTGGAAATaGAGCTGCCAGAACTGCTGG +
Preference number: 4 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQFWHWK*SCQNCW
Trigger: CCAGCAGTTCTGGCAGCTCCATTTCCAGTGCCAGAA...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGCAGAGCTTCTGGCACTaGAAATGGAGCTGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQQSFWH*KWSCQN
Trigger: GTTCTGGCAGCTCCATTTCCAGTGCCAGAAGCTCTG...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp GGTATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCCACCCTGGGCAATGCTaGATCCGCTGGAGCTACCAC +
Preference number: 4 (lower is better)
Translates to: GITSSGVRGALRAFQGFPHPGQC*IRWSYH
Trigger: GTGGTAGCTCCAGCGGATCCAGCATTGCCCAGGGTG...GGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTATACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp TATTGTCTTCCTCCTCTGTGGGAGCAGCTGGAAGGTAGAAGAGAAACACAGCCCCCTGCAGAACCACCCTaGGCAATGCTGGATCCGCTG +
Preference number: 4 (lower is better)
Translates to: YCLPPLWEQLEGRRETQPPAEPP*AMLDPL
Trigger: CAGCGGATCCAGCATTGCCCAGGGTGGTTCTGCAGG...GGGCTGTGTTTCTCTTCTACCTTCCAGCTGCTCCCACAGAGGAGGAAGACAATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376288.3
CDS-3UTR CCA 90 bp GGTATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCCCTGCAGAACCACCCTaGGCAATGCTGGATCCGCTG +
Preference number: 4 (lower is better)
Translates to: GITSSGVRGALRAFQGFPPAEPP*AMLDPL
Trigger: CAGCGGATCCAGCATTGCCCAGGGTGGTTCTGCAGG...GGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTATACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp ATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGTCTGCTGCTCCCCAGCTaGGAGGAACCGGATGCACCT +
Preference number: 4 (lower is better)
Translates to: ITSSGVRGALRAFQGFPSLLLPS*EEPDAP
Trigger: AGGTGCATCCGGTTCCTCCCAGCTGGGGAGCAGCAG...ACTGGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGGAGCCATTCCCTACTTaGAAGCTGCTGCTGCTGAAC +
Preference number: 4 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQEPFPT*KLLLLN
Trigger: GTTCAGCAGCAGCAGCTTCCAAGTAGGGAATGGCTC...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGAAAGGAAGGGACCCCTaGAGAGCCTTTCACAGGGTT +
Preference number: 4 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQKGRDP*RAFHRV
Trigger: AACCCTGTGAAAGGCTCTCCAGGGGTCCCTTCCTTT...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp TATTGTCTTCCTCCTCTGTGGGAGCAGCTGGAAGGTAGAAGAGAAACACAGCCCGAGGAAGCTGCCGACTaGCTGGGGATGATGGGGTTG +
Preference number: 4 (lower is better)
Translates to: YCLPPLWEQLEGRRETQPEEAAD*LGMMGL
Trigger: CAACCCCATCATCCCCAGCCAGTCGGCAGCTTCCTC...GGGCTGTGTTTCTCTTCTACCTTCCAGCTGCTCCCACAGAGGAGGAAGACAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376288.3
CDS-3UTR CCA 90 bp GGTATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCGAGGAAGCTGCCGACTaGCTGGGGATGATGGGGTTG +
Preference number: 4 (lower is better)
Translates to: GITSSGVRGALRAFQGFPEEAAD*LGMMGL
Trigger: CAACCCCATCATCCCCAGCCAGTCGGCAGCTTCCTC...GGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTATACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGAGAGAGCAGGGTCCCTTaGAGCCCGTGGAGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRESRVP*SPWSRL
Trigger: GAGGCGGCTCCACGGGCTCCAAGGGACCCTGCTCTC...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp GGTATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCTGGGGACTCGAGAACTaGAGGGAGAGCAGGGTCCCT +
Preference number: 4 (lower is better)
Translates to: GITSSGVRGALRAFQGFPWGLEN*RESRVP
Trigger: AGGGACCCTGCTCTCCCTCCAGTTCTCGAGTCCCCA...GGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTATACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGAGAAGGAGCCGGTGCCTaGTGGGGAGCAGGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: WKVEEKHSPLLKENEGHREGAGA*WGAGAL
Trigger: CAGAGCCCCTGCTCCCCACCAGGCACCGGCTCCTTC...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGAGCGGAGGGATCAGGATaGGGAGAGCCATCGGGGCCC +
Preference number: 4 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRAEGSG*GEPSGP
Trigger: GGGCCCCGATGGCTCTCCCCATCCTGATCCCTCCGC...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp ATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGTTGGAGCCACAGGGCTTaGCACCAGCGGAGGGATCAG +
Preference number: 4 (lower is better)
Translates to: ITSSGVRGALRAFQGFPSWSHRA*HQRRDQ
Trigger: CTGATCCCTCCGCTGGTGCCAAGCCCTGTGGCTCCA...ACTGGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGTGTCTTCCTCCTCTGTaGGAGGAGCTGGAAGGTAGA +
Preference number: 4 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQCLPPL*EELEGR
Trigger: TCTACCTTCCAGCTCCTCCCACAGAGGAGGAAGACA...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259726.6
ENST00000383531.4
ENST00000418599.2
ENST00000457875.2
CDS-3UTR TCA 90 bp ATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGTCCGACTGGCTGGGGATaGTGGGGTTGCTGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: ITSSGVRGALRAFQGFPSPTGWG*WGCWRS
Trigger: ACTTCTCCAGCAACCCCATCATCCCCAGCCAGTCGG...ACTGGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR TCA 90 bp CTTCCTCCTCTGTGGGAGCAGCTGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGCGTCAGAGGTGCTCTaGGAGCATTTCAGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: LPPLWEQLEGRRETQPAFASEVL*EHFRGF
Trigger: GAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGC...AAAAGCGGGCTGTGTTTCTCTTCTACCTTCCAGCTGCTCCCACAGAGGAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376288.3
CDS-3UTR GCA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGAACGCCCCATCCAGGGTaGCCGAGACGAGCCCATCTC +
Preference number: 4 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRTPHPG*PRRAHL
Trigger: GAGATGGGCTCGTCTCGGGCACCCTGGATGGGGCGT...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR GCA 90 bp CTTCCTCCTCTGTGGGAGCAGCTGGAAGGTAGAAGAGAAACACAGCCCGCTTTTCACTGGAAATGGAGCTaGCAGAACTGCTGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: LPPLWEQLEGRRETQPAFHWKWS*QNCWSH
Trigger: GTGGCTCCAGCAGTTCTGGCAGCTCCATTTCCAGTG...AAAAGCGGGCTGTGTTTCTCTTCTACCTTCCAGCTGCTCCCACAGAGGAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376288.3
CDS-3UTR GCA 90 bp GGTATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAACCACCCTGGGCAATaGTGGATCCGCTGGAGCTAC +
Preference number: 4 (lower is better)
Translates to: GITSSGVRGALRAFQGFPNHPGQ*WIRWSY
Trigger: GTAGCTCCAGCGGATCCAGCATTGCCCAGGGTGGTT...GGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTATACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR GCA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGAGGGGCACCAGAACCGTaGTGGTCCACCACCACCACC +
Preference number: 4 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRGAPEP*WSTTTT
Trigger: GGTGGTGGTGGTGGACCAGCACGGTTCTGGTGCCCC...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR GCA 90 bp ATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGTTTGGGGGACAGGGCTTaGCTGGAAGGCCACCATTGC +
Preference number: 4 (lower is better)
Translates to: ITSSGVRGALRAFQGFPSLGDRA*LEGHHC
Trigger: GCAATGGTGGCCTTCCAGGCAAGCCCTGTCCCCCAA...ACTGGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR GCA 90 bp GGTATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAATGGCCGAGGAAGCTaGCGACTGGCTGGGGATGAT +
Preference number: 4 (lower is better)
Translates to: GITSSGVRGALRAFQGFPNGRGS*RLAGDD
Trigger: ATCATCCCCAGCCAGTCGGCAGCTTCCTCGGCCATT...GGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTATACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR GCA 90 bp TATTGTCTTCCTCCTCTGTGGGAGCAGCTGGAAGGTAGAAGAGAAACACAGCCCGGATCTTTCCAGCACTaGTGGAGCCACAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: YCLPPLWEQLEGRRETQPGSFQH*WSHRAW
Trigger: CCAAGCCCTGTGGCTCCAGCAGTGCTGGAAAGATCC...GGGCTGTGTTTCTCTTCTACCTTCCAGCTGCTCCCACAGAGGAGGAAGACAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376288.3
CDS-3UTR CCA 90 bp ATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGTCTTAGCCAAGGTCCCTaGCAGGAGGAGACCAGCCAG +
Preference number: 4 (lower is better)
Translates to: ITSSGVRGALRAFQGFPSLSQGP*QEETSQ
Trigger: CTGGCTGGTCTCCTCCTGCCAGGGACCTTGGCTAAG...ACTGGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp ATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGTCACCCTGGGCAATGCTaGATCCGCTGGAGCTACCAC +
Preference number: 4 (lower is better)
Translates to: ITSSGVRGALRAFQGFPSHPGQC*IRWSYH
Trigger: GTGGTAGCTCCAGCGGATCCAGCATTGCCCAGGGTG...ACTGGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGAGAGTTGTCATTGGTTaGCAGAGCAGAGCCATTCCC +
Preference number: 4 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQRVVIG*QSRAIP
Trigger: GGGAATGGCTCTGCTCTGCCAACCAATGACAACTCT...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGGAGCTTTGTCCAGGCTaGGAAGGGTTTAGTATTCCG +
Preference number: 4 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQELCPG*EGFSIP
Trigger: CGGAATACTAAACCCTTCCCAGCCTGGACAAAGCTC...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp TATTGTCTTCCTCCTCTGTGGGAGCAGCTGGAAGGTAGAAGAGAAACACAGCCCATTTGCCCTCAGAGATaGGGGGCCCAGCTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: YCLPPLWEQLEGRRETQPICPQR*GAQLQR
Trigger: CCTTTGCAGCTGGGCCCCCCATCTCTGAGGGCAAAT...GGGCTGTGTTTCTCTTCTACCTTCCAGCTGCTCCCACAGAGGAGGAAGACAATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376288.3
CDS-3UTR CCA 90 bp ATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGTGAGGAAGCTGCCGACTaGCTGGGGATGATGGGGTTG +
Preference number: 4 (lower is better)
Translates to: ITSSGVRGALRAFQGFPSEEAAD*LGMMGL
Trigger: CAACCCCATCATCCCCAGCCAGTCGGCAGCTTCCTC...ACTGGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGACCGCCTCCACAGAGCTaGACCCCACCAGTCCCCACT +
Preference number: 4 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRPPPQS*TPPVPT
Trigger: AGTGGGGACTGGTGGGGTCCAGCTCTGTGGAGGCGG...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGAGTCCCTTGGAGCCCGTaGAGCCGCCTCCACAGAGCT +
Preference number: 4 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRVPWSP*SRLHRA
Trigger: AGCTCTGTGGAGGCGGCTCCACGGGCTCCAAGGGAC...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp AGGAGCTGGAAGGTAGAAGAGAAATACAGCCCGCTTTTGAAGGAAAATGAGGAAGAGAGCAGGGTCCCTTaGAGCCCGTGGAGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: RSWKVEEKYSPLLKENEEESRVP*SPWSRL
Trigger: GAGGCGGCTCCACGGGCTCCAAGGGACCCTGCTCTC...TTCCTCATTTTCCTTCAAAAGCGGGCTGTATTTCTCTTCTACCTTCCAGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259726.6
CDS-3UTR CCA 90 bp AGGAGCTGGAAGGTAGAAGAGAAATACAGCCCGCTTTTGAAGGAAAATGAGGAAGAAGGAGCCGGTGCCTaGTGGGGAGCAGGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: RSWKVEEKYSPLLKENEEEGAGA*WGAGAL
Trigger: CAGAGCCCCTGCTCCCCACCAGGCACCGGCTCCTTC...TTCCTCATTTTCCTTCAAAAGCGGGCTGTATTTCTCTTCTACCTTCCAGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000259726.6
CDS-3UTR CCA 90 bp CTTCCTCCTCTGTGGGAGCAGCTGGAAGGTAGAAGAGAAACACAGCCCGCTTTTCTAGGATATCCCGGATaGAGCGGCAGGGGATCTTTC +
Preference number: 4 (lower is better)
Translates to: LPPLWEQLEGRRETQPAFLGYPG*SGRGSF
Trigger: GAAAGATCCCCTGCCGCTCCATCCGGGATATCCTAG...AAAAGCGGGCTGTGTTTCTCTTCTACCTTCCAGCTGCTCCCACAGAGGAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376288.3
CDS-3UTR CCA 90 bp ATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGTTCAGGGTCAGCTAGCTaGGGCCCCAGAGGCTTCACT +
Preference number: 4 (lower is better)
Translates to: ITSSGVRGALRAFQGFPSSGSAS*GPRGFT
Trigger: AGTGAAGCCTCTGGGGCCCCAGCTAGCTGACCCTGA...ACTGGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGCTCTGTGGGAGCAGCTaGAAGGTAGAAGAGAAACAC +
Preference number: 4 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQLCGSS*KVEEKH
Trigger: GTGTTTCTCTTCTACCTTCCAGCTGCTCCCACAGAG...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376288.3
CDS-3UTR TCA 90 bp ATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGTATCCGGAGGAGTAGCTaGCCTGGGAATACCCCGTTC +
Preference number: 4 (lower is better)
Translates to: ITSSGVRGALRAFQGFPSIRRSS*PGNTPF
Trigger: GAACGGGGTATTCCCAGGTCAGCTACTCCTCCGGAT...ACTGGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR TCA 90 bp ATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGTACCCAGGGAATCATCTaGGCACTGAGGGAAGTGGCC +
Preference number: 4 (lower is better)
Translates to: ITSSGVRGALRAFQGFPSTQGII*ALREVA
Trigger: GGCCACTTCCCTCAGTGCTCAGATGATTCCCTGGGT...ACTGGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259726.6
ENST00000376288.3
CDS-3UTR TCA 90 bp GGTATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCGTCCCCACAGTTTACTaGGCCATCTGTCCAGGATCC +
Preference number: 4 (lower is better)
Translates to: GITSSGVRGALRAFQGFPVPTVY*AICPGS
Trigger: GGATCCTGGACAGATGGCTCAGTAAACTGTGGGGAC...GGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTATACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR TCA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGAACACAGCCCGCTTTTaGAGGAAAATGAGGGACACA +
Preference number: 4 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQNTARF*RKMRDT
Trigger: TGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTT...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR GCA 90 bp GGTATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCCACTGGAAATGGAGCTaGCAGAACTGCTGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: GITSSGVRGALRAFQGFPHWKWS*QNCWSH
Trigger: GTGGCTCCAGCAGTTCTGGCAGCTCCATTTCCAGTG...GGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTATACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR GCA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGTGGCTTAAAAGATCCTaGAGAACCACCCTGGGCAAT +
Preference number: 4 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQWLKRS*RTTLGN
Trigger: ATTGCCCAGGGTGGTTCTGCAGGATCTTTTAAGCCA...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR GCA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGATTCCCGAGTGAGAGCTaGTGCTCCCCAGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRFPSES*CSPAGR
Trigger: CCTCCCAGCTGGGGAGCAGCAGCTCTCACTCGGGAA...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR GCA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGACGATGGGCCCTCCACTaGAGGGAGAGTCGGGGATGT +
Preference number: 4 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRRWALH*RESRGC
Trigger: ACATCCCCGACTCTCCCTGCAGTGGAGGGCCCATCG...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR GCA 90 bp ATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGTAATGGCCGAGGAAGCTaGCGACTGGCTGGGGATGAT +
Preference number: 4 (lower is better)
Translates to: ITSSGVRGALRAFQGFPSNGRGS*RLAGDD
Trigger: ATCATCCCCAGCCAGTCGGCAGCTTCCTCGGCCATT...ACTGGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR GCA 90 bp ATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGTGGATCTTTCCAGCACTaGTGGAGCCACAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: ITSSGVRGALRAFQGFPSGSFQH*WSHRAW
Trigger: CCAAGCCCTGTGGCTCCAGCAGTGCTGGAAAGATCC...ACTGGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp ATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGTCAATGCTGGATCCGCTaGAGCTACCACTGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: ITSSGVRGALRAFQGFPSQCWIR*SYHWSH
Trigger: GTGGCTCCAGTGGTAGCTCCAGCGGATCCAGCATTG...ACTGGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGACTGCTGCTCCCCAGCTaGGAGGAACCGGATGCACCT +
Preference number: 4 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRLLLPS*EEPDAP
Trigger: AGGTGCATCCGGTTCCTCCCAGCTGGGGAGCAGCAG...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp CTTCCTCCTCTGTGGGAGCAGCTGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAGCCATTCCCTACTTaGAAGCTGCTGCTGCTGAAC +
Preference number: 4 (lower is better)
Translates to: LPPLWEQLEGRRETQPAFEPFPT*KLLLLN
Trigger: GTTCAGCAGCAGCAGCTTCCAAGTAGGGAATGGCTC...AAAAGCGGGCTGTGTTTCTCTTCTACCTTCCAGCTGCTCCCACAGAGGAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376288.3
CDS-3UTR CCA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGGGTAAGAGTTGTCATTaGTTGGCAGAGCAGAGCCAT +
Preference number: 4 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQGKSCH*LAEQSH
Trigger: ATGGCTCTGCTCTGCCAACCAATGACAACTCTTACC...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp ATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGTGGGACAGGGCTTGCCTaGAAGGCCACCATTGCTACA +
Preference number: 4 (lower is better)
Translates to: ITSSGVRGALRAFQGFPSGTGLA*KATIAT
Trigger: TGTAGCAATGGTGGCCTTCCAGGCAAGCCCTGTCCC...ACTGGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp ATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGTGTCTACAGAGGTGATTaGGGGACAGGGCTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: ITSSGVRGALRAFQGFPSVYRGD*GTGLAW
Trigger: CCAGGCAAGCCCTGTCCCCCAATCACCTCTGTAGAC...ACTGGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp AGGAGCTGGAAGGTAGAAGAGAAATACAGCCCGCTTTTGAAGGAAAATGAGGAACCGCCTCCACAGAGCTaGACCCCACCAGTCCCCACT +
Preference number: 4 (lower is better)
Translates to: RSWKVEEKYSPLLKENEEPPPQS*TPPVPT
Trigger: AGTGGGGACTGGTGGGGTCCAGCTCTGTGGAGGCGG...TTCCTCATTTTCCTTCAAAAGCGGGCTGTATTTCTCTTCTACCTTCCAGCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000259726.6
CDS-3UTR CCA 90 bp AAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGAACACAGAGACCCGCCTCCACAGAGCTaGACCCCACCAGTCCCCACT +
Preference number: 4 (lower is better)
Translates to: KVEEKHSPLLKENEEHRDPPPQS*TPPVPT
Trigger: AGTGGGGACTGGTGGGGTCCAGCTCTGTGGAGGCGG...GTCTCTGTGTTCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000376288.3
CDS-3UTR CCA 90 bp AAGGTAGAAGAGAAATACAGCCCGCTTTTGAAGGAAAATGAGGAACACAGAGACGCGGAGGGATCAGGATaGGGAGAGCCATCGGGGCCC +
Preference number: 4 (lower is better)
Translates to: KVEEKYSPLLKENEEHRDAEGSG*GEPSGP
Trigger: GGGCCCCGATGGCTCTCCCCATCCTGATCCCTCCGC...GTCTCTGTGTTCCTCATTTTCCTTCAAAAGCGGGCTGTATTTCTCTTCTACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259726.6
CDS-3UTR CCA 90 bp AGCAGCTGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGAATGGAGCCACAGGGCTTaGCACCAGCGGAGGGATCAG +
Preference number: 4 (lower is better)
Translates to: SSWKVEEKHSPLLKENEEWSHRA*HQRRDQ
Trigger: CTGATCCCTCCGCTGGTGCCAAGCCCTGTGGCTCCA...TTCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCAGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376288.3
CDS-3UTR CCA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGATGGAGCCACAGGGCTTaGCACCAGCGGAGGGATCAG +
Preference number: 4 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRWSHRA*HQRRDQ
Trigger: CTGATCCCTCCGCTGGTGCCAAGCCCTGTGGCTCCA...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR TCA 90 bp AAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGAACACAGAGACGACGCTGGTTGGAGCTaGCGCTTTGGCCACTGCTGG +
Preference number: 4 (lower is better)
Translates to: KVEEKHSPLLKENEEHRDDAGWS*RFGHCW
Trigger: CCAGCAGTGGCCAAAGCGTCAGCTCCAACCAGCGTC...GTCTCTGTGTTCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376288.3
CDS-3UTR TCA 90 bp GGTATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCACAGACATGCAAGGGTaGCCAGAAGAGCTGGACTTG +
Preference number: 4 (lower is better)
Translates to: GITSSGVRGALRAFQGFPTDMQG*PEELDL
Trigger: CAAGTCCAGCTCTTCTGGTCACCCTTGCATGTCTGT...GGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR TCA 90 bp ATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGTGCGTCAGAGGTGCTCTaGGAGCATTTCAGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: ITSSGVRGALRAFQGFPSASEVL*EHFRGF
Trigger: GAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGC...ACTGGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR GCA 90 bp ATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGTTGGAGCTGCCAGAACTaGTGGAGCCACTGTAGCTAC +
Preference number: 4 (lower is better)
Translates to: ITSSGVRGALRAFQGFPSWSCQN*WSHCSY
Trigger: GTAGCTACAGTGGCTCCAGCAGTTCTGGCAGCTCCA...ACTGGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR GCA 90 bp ATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGTCACTGGAAATGGAGCTaGCAGAACTGCTGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: ITSSGVRGALRAFQGFPSHWKWS*QNCWSH
Trigger: GTGGCTCCAGCAGTTCTGGCAGCTCCATTTCCAGTG...ACTGGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR GCA 90 bp GGTATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCACTGAAAGCTGCTGCTaGTGCTCGAATGAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GITSSGVRGALRAFQGFPTESCC*CSNESC
Trigger: GCAGCTCTCATTCGAGCAGCAGCAGCAGCTTTCAGT...GGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR GCA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGATTGGGGGACAGGGCTTaGCTGGAAGGCCACCATTGC +
Preference number: 4 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRLGDRA*LEGHHC
Trigger: GCAATGGTGGCCTTCCAGGCAAGCCCTGTCCCCCAA...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR GCA 90 bp GGTATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGGAGGAGACAGACATaGAAGGGTGACCAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: GITSSGVRGALRAFQGFPRRRQT*KGDQKS
Trigger: GCTCTTCTGGTCACCCTTGCATGTCTGTCTCCTCCT...GGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGACTTAGCCAAGGTCCCTaGCAGGAGGAGACCAGCCAG +
Preference number: 4 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRLSQGP*QEETSQ
Trigger: CTGGCTGGTCTCCTCCTGCCAGGGACCTTGGCTAAG...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp TATTGTCTTCCTCCTCTGTGGGAGCAGCTGGAAGGTAGAAGAGAAACACAGCCCTTCTGGCACTGGAAATaGAGCTGCCAGAACTGCTGG +
Preference number: 4 (lower is better)
Translates to: YCLPPLWEQLEGRRETQPFWHWK*SCQNCW
Trigger: CCAGCAGTTCTGGCAGCTCCATTTCCAGTGCCAGAA...GGGCTGTGTTTCTCTTCTACCTTCCAGCTGCTCCCACAGAGGAGGAAGACAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376288.3
CDS-3UTR CCA 90 bp GGTATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCTTCTGGCACTGGAAATaGAGCTGCCAGAACTGCTGG +
Preference number: 4 (lower is better)
Translates to: GITSSGVRGALRAFQGFPFWHWK*SCQNCW
Trigger: CCAGCAGTTCTGGCAGCTCCATTTCCAGTGCCAGAA...GGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp AGCAGCTGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGAACACCCTGGGCAATGCTaGATCCGCTGGAGCTACCAC +
Preference number: 4 (lower is better)
Translates to: SSWKVEEKHSPLLKENEEHPGQC*IRWSYH
Trigger: GTGGTAGCTCCAGCGGATCCAGCATTGCCCAGGGTG...TTCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCAGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376288.3
CDS-3UTR CCA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGACCTGCAGAACCACCCTaGGCAATGCTGGATCCGCTG +
Preference number: 4 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRPAEPP*AMLDPL
Trigger: CAGCGGATCCAGCATTGCCCAGGGTGGTTCTGCAGG...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp GGTATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCGAGCCATTCCCTACTTaGAAGCTGCTGCTGCTGAAC +
Preference number: 4 (lower is better)
Translates to: GITSSGVRGALRAFQGFPEPFPT*KLLLLN
Trigger: GTTCAGCAGCAGCAGCTTCCAAGTAGGGAATGGCTC...GGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGACTGTAGGTCATGCCTaGAACCAGATAACTGTCAGA +
Preference number: 4 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQTVGHA*NQITVR
Trigger: TCTGACAGTTATCTGGTTCCAGGCATGACCTACAGT...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp GGTATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAAAGGAAGGGACCCCTaGAGAGCCTTTCACAGGGTT +
Preference number: 4 (lower is better)
Translates to: GITSSGVRGALRAFQGFPKGRDP*RAFHRV
Trigger: AACCCTGTGAAAGGCTCTCCAGGGGTCCCTTCCTTT...GGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp AGCAGCTGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGAATGGGGACTCGAGAACTaGAGGGAGAGCAGGGTCCCT +
Preference number: 4 (lower is better)
Translates to: SSWKVEEKHSPLLKENEEWGLEN*RESRVP
Trigger: AGGGACCCTGCTCTCCCTCCAGTTCTCGAGTCCCCA...TTCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCAGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376288.3
CDS-3UTR CCA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGATGGGGACTCGAGAACTaGAGGGAGAGCAGGGTCCCT +
Preference number: 4 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRWGLEN*RESRVP
Trigger: AGGGACCCTGCTCTCCCTCCAGTTCTCGAGTCCCCA...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp ATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGTCTAGGATATCCCGGATaGAGCGGCAGGGGATCTTTC +
Preference number: 4 (lower is better)
Translates to: ITSSGVRGALRAFQGFPSLGYPG*SGRGSF
Trigger: GAAAGATCCCCTGCCGCTCCATCCGGGATATCCTAG...ACTGGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp ATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGTCCCAGAGGCTTCACTTaGGCTAGGATATCCCGGATG +
Preference number: 4 (lower is better)
Translates to: ITSSGVRGALRAFQGFPSPRGFT*ARISRM
Trigger: CATCCGGGATATCCTAGCCCAAGTGAAGCCTCTGGG...ACTGGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp AGCAGCTGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGAATCAGGGTCAGCTAGCTaGGGCCCCAGAGGCTTCACT +
Preference number: 4 (lower is better)
Translates to: SSWKVEEKHSPLLKENEESGSAS*GPRGFT
Trigger: AGTGAAGCCTCTGGGGCCCCAGCTAGCTGACCCTGA...TTCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCAGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376288.3
CDS-3UTR CCA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGATCAGGGTCAGCTAGCTaGGGCCCCAGAGGCTTCACT +
Preference number: 4 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRSGSAS*GPRGFT
Trigger: AGTGAAGCCTCTGGGGCCCCAGCTAGCTGACCCTGA...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp GGTATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCTGTCTTCCTCCTCTGTaGGAGGAGCTGGAAGGTAGA +
Preference number: 4 (lower is better)
Translates to: GITSSGVRGALRAFQGFPCLPPL*EELEGR
Trigger: TCTACCTTCCAGCTCCTCCCACAGAGGAGGAAGACA...GGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259726.6
ENST00000383531.4
ENST00000418599.2
ENST00000457875.2
CDS-3UTR CCA 90 bp GGTATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCTGTCTTCCTCCTCTGTaGGAGCAGCTGGAAGGTAGA +
Preference number: 4 (lower is better)
Translates to: GITSSGVRGALRAFQGFPCLPPL*EQLEGR
Trigger: TCTACCTTCCAGCTGCTCCCACAGAGGAGGAAGACA...GGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376288.3
CDS-3UTR TCA 90 bp AGCAGCTGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGAAATCCGGAGGAGTAGCTaGCCTGGGAATACCCCGTTC +
Preference number: 4 (lower is better)
Translates to: SSWKVEEKHSPLLKENEEIRRSS*PGNTPF
Trigger: GAACGGGGTATTCCCAGGTCAGCTACTCCTCCGGAT...TTCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCAGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376288.3
CDS-3UTR TCA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGAATCCGGAGGAGTAGCTaGCCTGGGAATACCCCGTTC +
Preference number: 4 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRIRRSS*PGNTPF
Trigger: GAACGGGGTATTCCCAGGTCAGCTACTCCTCCGGAT...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR TCA 90 bp AGCAGCTGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGAAACCCAGGGAATCATCTaGGCACTGAGGGAAGTGGCC +
Preference number: 4 (lower is better)
Translates to: SSWKVEEKHSPLLKENEETQGII*ALREVA
Trigger: GGCCACTTCCCTCAGTGCTCAGATGATTCCCTGGGT...TTCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCAGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376288.3
CDS-3UTR TCA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGAATACAGCCCGCTTTTaGAGGAAAATGAGGAACACA +
Preference number: 4 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQNTARF*RKMRNT
Trigger: TGTGTTCCTCATTTTCCTTCAAAAGCGGGCTGTATT...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259726.6
CDS-3UTR GCA 90 bp AGCAGCTGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGAAAACCACCCTGGGCAATaGTGGATCCGCTGGAGCTAC +
Preference number: 4 (lower is better)
Translates to: SSWKVEEKHSPLLKENEENHPGQ*WIRWSY
Trigger: GTAGCTCCAGCGGATCCAGCATTGCCCAGGGTGGTT...TTCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCAGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376288.3
CDS-3UTR GCA 90 bp ATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGTACTGAAAGCTGCTGCTaGTGCTCGAATGAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: ITSSGVRGALRAFQGFPSTESCC*CSNESC
Trigger: GCAGCTCTCATTCGAGCAGCAGCAGCAGCTTTCAGT...ACTGGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR GCA 90 bp AAGGTAGAAGAGAAATACAGCCCGCTTTTGAAGGAAAATGAGGAACACAGAGACCGATGGGCCCTCCACTaGAGGGAGAGTCGGGGATGT +
Preference number: 4 (lower is better)
Translates to: KVEEKYSPLLKENEEHRDRWALH*RESRGC
Trigger: ACATCCCCGACTCTCCCTGCAGTGGAGGGCCCATCG...GTCTCTGTGTTCCTCATTTTCCTTCAAAAGCGGGCTGTATTTCTCTTCTACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259726.6
CDS-3UTR GCA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGAAATGGCCGAGGAAGCTaGCGACTGGCTGGGGATGAT +
Preference number: 4 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRNGRGS*RLAGDD
Trigger: ATCATCCCCAGCCAGTCGGCAGCTTCCTCGGCCATT...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR GCA 90 bp ATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGTAGGAGGAGACAGACATaGAAGGGTGACCAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: ITSSGVRGALRAFQGFPSRRRQT*KGDQKS
Trigger: GCTCTTCTGGTCACCCTTGCATGTCTGTCTCCTCCT...ACTGGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR GCA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGAGGATCTTTCCAGCACTaGTGGAGCCACAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRGSFQH*WSHRAW
Trigger: CCAAGCCCTGTGGCTCCAGCAGTGCTGGAAAGATCC...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp AGGAGCTGGAAGGTAGAAGAGAAATACAGCCCGCTTTTGAAGGAAAATGAGGAACTTAGCCAAGGTCCCTaGCAGGAGGAGACCAGCCAG +
Preference number: 4 (lower is better)
Translates to: RSWKVEEKYSPLLKENEELSQGP*QEETSQ
Trigger: CTGGCTGGTCTCCTCCTGCCAGGGACCTTGGCTAAG...TTCCTCATTTTCCTTCAAAAGCGGGCTGTATTTCTCTTCTACCTTCCAGCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259726.6
CDS-3UTR CCA 90 bp ATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGTCAGAGCTTCTGGCACTaGAAATGGAGCTGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: ITSSGVRGALRAFQGFPSQSFWH*KWSCQN
Trigger: GTTCTGGCAGCTCCATTTCCAGTGCCAGAAGCTCTG...ACTGGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGACAATGCTGGATCCGCTaGAGCTACCACTGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRQCWIR*SYHWSH
Trigger: GTGGCTCCAGTGGTAGCTCCAGCGGATCCAGCATTG...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp GGTATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGAGTTGTCATTGGTTaGCAGAGCAGAGCCATTCCC +
Preference number: 4 (lower is better)
Translates to: GITSSGVRGALRAFQGFPRVVIG*QSRAIP
Trigger: GGGAATGGCTCTGCTCTGCCAACCAATGACAACTCT...GGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp GGTATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCGAGCTTTGTCCAGGCTaGGAAGGGTTTAGTATTCCG +
Preference number: 4 (lower is better)
Translates to: GITSSGVRGALRAFQGFPELCPG*EGFSIP
Trigger: CGGAATACTAAACCCTTCCCAGCCTGGACAAAGCTC...GGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGAGGGACAGGGCTTGCCTaGAAGGCCACCATTGCTACA +
Preference number: 4 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRGTGLA*KATIAT
Trigger: TGTAGCAATGGTGGCCTTCCAGGCAAGCCCTGTCCC...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGAGTCTACAGAGGTGATTaGGGGACAGGGCTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRVYRGD*GTGLAW
Trigger: CCAGGCAAGCCCTGTCCCCCAATCACCTCTGTAGAC...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp ATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGTAAAGGAAGGGACCCCTaGAGAGCCTTTCACAGGGTT +
Preference number: 4 (lower is better)
Translates to: ITSSGVRGALRAFQGFPSKGRDP*RAFHRV
Trigger: AACCCTGTGAAAGGCTCTCCAGGGGTCCCTTCCTTT...ACTGGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGAATTTGCCCTCAGAGATaGGGGGCCCAGCTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRICPQR*GAQLQR
Trigger: CCTTTGCAGCTGGGCCCCCCATCTCTGAGGGCAAAT...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp AAGGTAGAAGAGAAATACAGCCCGCTTTTGAAGGAAAATGAGGAACACAGAGACTGGAGCCACAGGGCTTaGCACCAGCGGAGGGATCAG +
Preference number: 4 (lower is better)
Translates to: KVEEKYSPLLKENEEHRDWSHRA*HQRRDQ
Trigger: CTGATCCCTCCGCTGGTGCCAAGCCCTGTGGCTCCA...GTCTCTGTGTTCCTCATTTTCCTTCAAAAGCGGGCTGTATTTCTCTTCTACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259726.6
CDS-3UTR CCA 90 bp GGTATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCGAGAGTCTGCAACCTTaGGGTAGTGGAGAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: GITSSGVRGALRAFQGFPESLQP*GSGESR
Trigger: TCTGCTTTCTCCACTACCCCAAGGTTGCAGACTCTC...GGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259726.6
ENST00000376288.3
CDS-3UTR TCA 90 bp AGGAGCTGGAAGGTAGAAGAGAAATACAGCCCGCTTTTGAAGGAAAATGAGGAAGGAAGCTGCTGCTGCTaGACTGAAAGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RSWKVEEKYSPLLKENEEGSCCC*TESCCC
Trigger: GCAGCAGCAGCTTTCAGTTCAGCAGCAGCAGCTTCC...TTCCTCATTTTCCTTCAAAAGCGGGCTGTATTTCTCTTCTACCTTCCAGCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259726.6
CDS-3UTR TCA 90 bp AGGAGCTGGAAGGTAGAAGAGAAATACAGCCCGCTTTTGAAGGAAAATGAGGAAGGGAAGGAGGGAAACTaGGCTAACCCTATGCCTGGG +
Preference number: 4 (lower is better)
Translates to: RSWKVEEKYSPLLKENEEGKEGN*ANPMPG
Trigger: CCCAGGCATAGGGTTAGCTCAGTTTCCCTCCTTCCC...TTCCTCATTTTCCTTCAAAAGCGGGCTGTATTTCTCTTCTACCTTCCAGCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259726.6
CDS-3UTR TCA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGTCAAGAGAGGAGCTTTaGATCTACCATTTTGAGAAG +
Preference number: 4 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQSREEL*IYHFEK
Trigger: CTTCTCAAAATGGTAGATTCAAAGCTCCTCTCTTGA...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR TCA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGAGTCCCCACAGTTTACTaGGCCATCTGTCCAGGATCC +
Preference number: 4 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRVPTVY*AICPGS
Trigger: GGATCCTGGACAGATGGCTCAGTAAACTGTGGGGAC...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR TCA 90 bp GGTATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAACACAGCCCGCTTTTaGAGGAAAATGAGGGACACA +
Preference number: 4 (lower is better)
Translates to: GITSSGVRGALRAFQGFPNTARF*RKMRDT
Trigger: TGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTT...GGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTATACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR GCA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGACACTGGAAATGGAGCTaGCAGAACTGCTGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRHWKWS*QNCWSH
Trigger: GTGGCTCCAGCAGTTCTGGCAGCTCCATTTCCAGTG...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR GCA 90 bp AAGGTAGAAGAGAAATACAGCCCGCTTTTGAAGGAAAATGAGGAACACAGAGACTTGGGGGACAGGGCTTaGCTGGAAGGCCACCATTGC +
Preference number: 4 (lower is better)
Translates to: KVEEKYSPLLKENEEHRDLGDRA*LEGHHC
Trigger: GCAATGGTGGCCTTCCAGGCAAGCCCTGTCCCCCAA...GTCTCTGTGTTCCTCATTTTCCTTCAAAAGCGGGCTGTATTTCTCTTCTACCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000259726.6
CDS-3UTR CCA 90 bp GGTATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCGGAATACCCCGTTCCTaGCTTAAAAGATCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: GITSSGVRGALRAFQGFPGIPRS*LKRSCR
Trigger: TCTGCAGGATCTTTTAAGCCAGGAACGGGGTATTCC...GGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTATACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp ATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGTAGAGTTGTCATTGGTTaGCAGAGCAGAGCCATTCCC +
Preference number: 4 (lower is better)
Translates to: ITSSGVRGALRAFQGFPSRVVIG*QSRAIP
Trigger: GGGAATGGCTCTGCTCTGCCAACCAATGACAACTCT...ACTGGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGAGAACTACAGGGACGCTaGTTGGAGCTGACGCTTTGG +
Preference number: 4 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRELQGR*LELTLW
Trigger: CCAAAGCGTCAGCTCCAACCAGCGTCCCTGTAGTTC...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp AGGAGCTGGAAGGTAGAAGAGAAATACAGCCCGCTTTTGAAGGAAAATGAGGAAGGGACAGGGCTTGCCTaGAAGGCCACCATTGCTACA +
Preference number: 4 (lower is better)
Translates to: RSWKVEEKYSPLLKENEEGTGLA*KATIAT
Trigger: TGTAGCAATGGTGGCCTTCCAGGCAAGCCCTGTCCC...TTCCTCATTTTCCTTCAAAAGCGGGCTGTATTTCTCTTCTACCTTCCAGCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259726.6
CDS-3UTR CCA 90 bp AAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGAACACAGAGACGGGACAGGGCTTGCCTaGAAGGCCACCATTGCTACA +
Preference number: 4 (lower is better)
Translates to: KVEEKHSPLLKENEEHRDGTGLA*KATIAT
Trigger: TGTAGCAATGGTGGCCTTCCAGGCAAGCCCTGTCCC...GTCTCTGTGTTCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376288.3
CDS-3UTR CCA 90 bp AGGAGCTGGAAGGTAGAAGAGAAATACAGCCCGCTTTTGAAGGAAAATGAGGAAATTTGCCCTCAGAGATaGGGGGCCCAGCTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: RSWKVEEKYSPLLKENEEICPQR*GAQLQR
Trigger: CCTTTGCAGCTGGGCCCCCCATCTCTGAGGGCAAAT...TTCCTCATTTTCCTTCAAAAGCGGGCTGTATTTCTCTTCTACCTTCCAGCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000259726.6
CDS-3UTR CCA 90 bp AAGGTAGAAGAGAAATACAGCCCGCTTTTGAAGGAAAATGAGGAACACAGAGACTGGGGACTCGAGAACTaGAGGGAGAGCAGGGTCCCT +
Preference number: 4 (lower is better)
Translates to: KVEEKYSPLLKENEEHRDWGLEN*RESRVP
Trigger: AGGGACCCTGCTCTCCCTCCAGTTCTCGAGTCCCCA...GTCTCTGTGTTCCTCATTTTCCTTCAAAAGCGGGCTGTATTTCTCTTCTACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259726.6
CDS-3UTR CCA 90 bp AGCAGCTGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGAACCCAGAGGCTTCACTTaGGCTAGGATATCCCGGATG +
Preference number: 4 (lower is better)
Translates to: SSWKVEEKHSPLLKENEEPRGFT*ARISRM
Trigger: CATCCGGGATATCCTAGCCCAAGTGAAGCCTCTGGG...TTCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCAGCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376288.3
CDS-3UTR CCA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGACCCAGAGGCTTCACTTaGGCTAGGATATCCCGGATG +
Preference number: 4 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRPRGFT*ARISRM
Trigger: CATCCGGGATATCCTAGCCCAAGTGAAGCCTCTGGG...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp ATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGTGAGAGTCTGCAACCTTaGGGTAGTGGAGAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: ITSSGVRGALRAFQGFPSESLQP*GSGESR
Trigger: TCTGCTTTCTCCACTACCCCAAGGTTGCAGACTCTC...ACTGGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259726.6
ENST00000376288.3
CDS-3UTR TCA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGAACAGACATGCAAGGGTaGCCAGAAGAGCTGGACTTG +
Preference number: 4 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRTDMQG*PEELDL
Trigger: CAAGTCCAGCTCTTCTGGTCACCCTTGCATGTCTGT...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR GCA 90 bp ATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGTTGGCTTAAAAGATCCTaGAGAACCACCCTGGGCAAT +
Preference number: 4 (lower is better)
Translates to: ITSSGVRGALRAFQGFPSWLKRS*RTTLGN
Trigger: ATTGCCCAGGGTGGTTCTGCAGGATCTTTTAAGCCA...ACTGGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR GCA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGAACTGAAAGCTGCTGCTaGTGCTCGAATGAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRTESCC*CSNESC
Trigger: GCAGCTCTCATTCGAGCAGCAGCAGCAGCTTTCAGT...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR GCA 90 bp GGTATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCCCTTACTGTAGGTCATaGCTGGAACCAGATAACTGT +
Preference number: 4 (lower is better)
Translates to: GITSSGVRGALRAFQGFPPYCRS*LEPDNC
Trigger: ACAGTTATCTGGTTCCAGGCATGACCTACAGTAAGG...GGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTATACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR GCA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGAAGGAGGAGACAGACATaGAAGGGTGACCAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRRRRQT*KGDQKS
Trigger: GCTCTTCTGGTCACCCTTGCATGTCTGTCTCCTCCT...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR GCA 90 bp AAGGTAGAAGAGAAATACAGCCCGCTTTTGAAGGAAAATGAGGAACACAGAGACGGATCTTTCCAGCACTaGTGGAGCCACAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: KVEEKYSPLLKENEEHRDGSFQH*WSHRAW
Trigger: CCAAGCCCTGTGGCTCCAGCAGTGCTGGAAAGATCC...GTCTCTGTGTTCCTCATTTTCCTTCAAAAGCGGGCTGTATTTCTCTTCTACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259726.6
CDS-3UTR GCA 90 bp ATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGTTTTGTGCCCAAGGCATaGACACACACAACAGTTGAC +
Preference number: 4 (lower is better)
Translates to: ITSSGVRGALRAFQGFPSFVPKA*THTTVD
Trigger: GTCAACTGTTGTGTGTGTGCATGCCTTGGGCACAAA...ACTGGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGATTCTGGCACTGGAAATaGAGCTGCCAGAACTGCTGG +
Preference number: 4 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRFWHWK*SCQNCW
Trigger: CCAGCAGTTCTGGCAGCTCCATTTCCAGTGCCAGAA...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp AGCAGCTGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGAACAGAGCTTCTGGCACTaGAAATGGAGCTGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: SSWKVEEKHSPLLKENEEQSFWH*KWSCQN
Trigger: GTTCTGGCAGCTCCATTTCCAGTGCCAGAAGCTCTG...TTCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCAGCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376288.3
CDS-3UTR CCA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGACAGAGCTTCTGGCACTaGAAATGGAGCTGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRQSFWH*KWSCQN
Trigger: GTTCTGGCAGCTCCATTTCCAGTGCCAGAAGCTCTG...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp AAGGTAGAAGAGAAATACAGCCCGCTTTTGAAGGAAAATGAGGAACACAGAGACCAATGCTGGATCCGCTaGAGCTACCACTGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: KVEEKYSPLLKENEEHRDQCWIR*SYHWSH
Trigger: GTGGCTCCAGTGGTAGCTCCAGCGGATCCAGCATTG...GTCTCTGTGTTCCTCATTTTCCTTCAAAAGCGGGCTGTATTTCTCTTCTACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259726.6
CDS-3UTR CCA 90 bp ATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGTGGAATACCCCGTTCCTaGCTTAAAAGATCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: ITSSGVRGALRAFQGFPSGIPRS*LKRSCR
Trigger: TCTGCAGGATCTTTTAAGCCAGGAACGGGGTATTCC...ACTGGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGAGAGCCATTCCCTACTTaGAAGCTGCTGCTGCTGAAC +
Preference number: 4 (lower is better)
Translates to: WKVEEKHSPLLKENEGHREPFPT*KLLLLN
Trigger: GTTCAGCAGCAGCAGCTTCCAAGTAGGGAATGGCTC...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp AAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGAACACAGAGACGAACTACAGGGACGCTaGTTGGAGCTGACGCTTTGG +
Preference number: 4 (lower is better)
Translates to: KVEEKHSPLLKENEEHRDELQGR*LELTLW
Trigger: CCAAAGCGTCAGCTCCAACCAGCGTCCCTGTAGTTC...GTCTCTGTGTTCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376288.3
CDS-3UTR CCA 90 bp GGTATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCACTGTAGGTCATGCCTaGAACCAGATAACTGTCAGA +
Preference number: 4 (lower is better)
Translates to: GITSSGVRGALRAFQGFPTVGHA*NQITVR
Trigger: TCTGACAGTTATCTGGTTCCAGGCATGACCTACAGT...GGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTATACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGAAAAGGAAGGGACCCCTaGAGAGCCTTTCACAGGGTT +
Preference number: 4 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRKGRDP*RAFHRV
Trigger: AACCCTGTGAAAGGCTCTCCAGGGGTCCCTTCCTTT...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR TCA 90 bp AAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGAACACAGAGACACAGACATGCAAGGGTaGCCAGAAGAGCTGGACTTG +
Preference number: 4 (lower is better)
Translates to: KVEEKHSPLLKENEEHRDTDMQG*PEELDL
Trigger: CAAGTCCAGCTCTTCTGGTCACCCTTGCATGTCTGT...GTCTCTGTGTTCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376288.3
CDS-3UTR GCA 90 bp ATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGTCCTTACTGTAGGTCATaGCTGGAACCAGATAACTGT +
Preference number: 4 (lower is better)
Translates to: ITSSGVRGALRAFQGFPSPYCRS*LEPDNC
Trigger: ACAGTTATCTGGTTCCAGGCATGACCTACAGTAAGG...ACTGGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp AGGAGCTGGAAGGTAGAAGAGAAATACAGCCCGCTTTTGAAGGAAAATGAGGAACAGAGCTTCTGGCACTaGAAATGGAGCTGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: RSWKVEEKYSPLLKENEEQSFWH*KWSCQN
Trigger: GTTCTGGCAGCTCCATTTCCAGTGCCAGAAGCTCTG...TTCCTCATTTTCCTTCAAAAGCGGGCTGTATTTCTCTTCTACCTTCCAGCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259726.6
CDS-3UTR CCA 90 bp AGGAGCTGGAAGGTAGAAGAGAAATACAGCCCGCTTTTGAAGGAAAATGAGGAAGAGCCATTCCCTACTTaGAAGCTGCTGCTGCTGAAC +
Preference number: 4 (lower is better)
Translates to: RSWKVEEKYSPLLKENEEEPFPT*KLLLLN
Trigger: GTTCAGCAGCAGCAGCTTCCAAGTAGGGAATGGCTC...TTCCTCATTTTCCTTCAAAAGCGGGCTGTATTTCTCTTCTACCTTCCAGCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259726.6
CDS-3UTR CCA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGAGAGCTTTGTCCAGGCTaGGAAGGGTTTAGTATTCCG +
Preference number: 4 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRELCPG*EGFSIP
Trigger: CGGAATACTAAACCCTTCCCAGCCTGGACAAAGCTC...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp ATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGTACTGTAGGTCATGCCTaGAACCAGATAACTGTCAGA +
Preference number: 4 (lower is better)
Translates to: ITSSGVRGALRAFQGFPSTVGHA*NQITVR
Trigger: TCTGACAGTTATCTGGTTCCAGGCATGACCTACAGT...ACTGGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR TCA 90 bp GGTATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCTCAAGAGAGGAGCTTTaGATCTACCATTTTGAGAAG +
Preference number: 4 (lower is better)
Translates to: GITSSGVRGALRAFQGFPSREEL*IYHFEK
Trigger: CTTCTCAAAATGGTAGATTCAAAGCTCCTCTCTTGA...GGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTATACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR GCA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGATGGCTTAAAAGATCCTaGAGAACCACCCTGGGCAAT +
Preference number: 4 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRWLKRS*RTTLGN
Trigger: ATTGCCCAGGGTGGTTCTGCAGGATCTTTTAAGCCA...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CCA 90 bp AAGGTAGAAGAGAAATACAGCCCGCTTTTGAAGGAAAATGAGGAACACAGAGACTTCTGGCACTGGAAATaGAGCTGCCAGAACTGCTGG +
Preference number: 4 (lower is better)
Translates to: KVEEKYSPLLKENEEHRDFWHWK*SCQNCW
Trigger: CCAGCAGTTCTGGCAGCTCCATTTCCAGTGCCAGAA...GTCTCTGTGTTCCTCATTTTCCTTCAAAAGCGGGCTGTATTTCTCTTCTACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259726.6
CDS-3UTR CCA 90 bp AGCAGCTGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGAAGGAATACCCCGTTCCTaGCTTAAAAGATCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: SSWKVEEKHSPLLKENEEGIPRS*LKRSCR
Trigger: TCTGCAGGATCTTTTAAGCCAGGAACGGGGTATTCC...TTCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCAGCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000376288.3
CDS-3UTR CCA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGAGGAATACCCCGTTCCTaGCTTAAAAGATCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRGIPRS*LKRSCR
Trigger: TCTGCAGGATCTTTTAAGCCAGGAACGGGGTATTCC...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR GCA 90 bp AGGAGCTGGAAGGTAGAAGAGAAATACAGCCCGCTTTTGAAGGAAAATGAGGAATGGCTTAAAAGATCCTaGAGAACCACCCTGGGCAAT +
Preference number: 4 (lower is better)
Translates to: RSWKVEEKYSPLLKENEEWLKRS*RTTLGN
Trigger: ATTGCCCAGGGTGGTTCTGCAGGATCTTTTAAGCCA...TTCCTCATTTTCCTTCAAAAGCGGGCTGTATTTCTCTTCTACCTTCCAGCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259726.6
CDS-3UTR GCA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGACCTTACTGTAGGTCATaGCTGGAACCAGATAACTGT +
Preference number: 4 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRPYCRS*LEPDNC
Trigger: ACAGTTATCTGGTTCCAGGCATGACCTACAGTAAGG...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR GCA 90 bp AGGAGCTGGAAGGTAGAAGAGAAATACAGCCCGCTTTTGAAGGAAAATGAGGAATTTGTGCCCAAGGCATaGACACACACAACAGTTGAC +
Preference number: 4 (lower is better)
Translates to: RSWKVEEKYSPLLKENEEFVPKA*THTTVD
Trigger: GTCAACTGTTGTGTGTGTGCATGCCTTGGGCACAAA...TTCCTCATTTTCCTTCAAAAGCGGGCTGTATTTCTCTTCTACCTTCCAGCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259726.6
CDS-3UTR CCA 90 bp AGGAGCTGGAAGGTAGAAGAGAAATACAGCCCGCTTTTGAAGGAAAATGAGGAAGGTAAGAGTTGTCATTaGTTGGCAGAGCAGAGCCAT +
Preference number: 4 (lower is better)
Translates to: RSWKVEEKYSPLLKENEEGKSCH*LAEQSH
Trigger: ATGGCTCTGCTCTGCCAACCAATGACAACTCTTACC...TTCCTCATTTTCCTTCAAAAGCGGGCTGTATTTCTCTTCTACCTTCCAGCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259726.6
CDS-3UTR CCA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGAACTGTAGGTCATGCCTaGAACCAGATAACTGTCAGA +
Preference number: 4 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRTVGHA*NQITVR
Trigger: TCTGACAGTTATCTGGTTCCAGGCATGACCTACAGT...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR TCA 90 bp AAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGAACACAGAGACAACACAGCCCGCTTTTaGAGGAAAATGAGGAACACA +
Preference number: 4 (lower is better)
Translates to: KVEEKHSPLLKENEEHRDNTARF*RKMRNT
Trigger: TGTGTTCCTCATTTTCCTTCAAAAGCGGGCTGTGTT...GTCTCTGTGTTCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000376288.3
CDS-3UTR TCA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGATCAAGAGAGGAGCTTTaGATCTACCATTTTGAGAAG +
Preference number: 4 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRSREEL*IYHFEK
Trigger: CTTCTCAAAATGGTAGATTCAAAGCTCCTCTCTTGA...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR GCA 90 bp AAGGTAGAAGAGAAATACAGCCCGCTTTTGAAGGAAAATGAGGAACACAGAGACCCTTACTGTAGGTCATaGCTGGAACCAGATAACTGT +
Preference number: 4 (lower is better)
Translates to: KVEEKYSPLLKENEEHRDPYCRS*LEPDNC
Trigger: ACAGTTATCTGGTTCCAGGCATGACCTACAGTAAGG...GTCTCTGTGTTCCTCATTTTCCTTCAAAAGCGGGCTGTATTTCTCTTCTACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259726.6
CDS-3UTR TCA 90 bp AGGAGCTGGAAGGTAGAAGAGAAATACAGCCCGCTTTTGAAGGAAAATGAGGAATCAAGAGAGGAGCTTTaGATCTACCATTTTGAGAAG +
Preference number: 4 (lower is better)
Translates to: RSWKVEEKYSPLLKENEESREEL*IYHFEK
Trigger: CTTCTCAAAATGGTAGATTCAAAGCTCCTCTCTTGA...TTCCTCATTTTCCTTCAAAAGCGGGCTGTATTTCTCTTCTACCTTCCAGCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259726.6
CDS GCA 90 bp GGGCTAGGATATCCCGGATGGAGCGGCAGGGGATCTTTCCAGCACTaGTGGAGCCACAGGGCTTGGCACCAGCGGAGGGATCAGGATGGG +
Preference number: 5 (lower is better)
Translates to: GLGYPGWSGRGSFQH*WSHRAWHQRRDQDG
Trigger: CCCATCCTGATCCCTCCGCTGGTGCCAAGCCCTGTGGCTCCAGCAGTGCTGGAAAGATCCCCTGCCGCTCCATCCGGGATATCCTAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS CCA 90 bp CTAGGATATCCCGGATGGAGCGGCAGGGGATCTTTCCAGCACTGCTaGAGCCACAGGGCTTGGCACCAGCGGAGGGATCAGGATGGGGAG +
Preference number: 5 (lower is better)
Translates to: LGYPGWSGRGSFQHC*SHRAWHQRRDQDGE
Trigger: CTCCCCATCCTGATCCCTCCGCTGGTGCCAAGCCCTGTGGCTCCAGCAGTGCTGGAAAGATCCCCTGCCGCTCCATCCGGGATATCCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CAA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGGGAGAGCAGGGTCCCTaGGAGCCCGTGGAGCCGCCT +
Preference number: 5 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQGEQGP*EPVEPP
Trigger: AGGCGGCTCCACGGGCTCCAAGGGACCCTGCTCTCC...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CAA 90 bp CTTCCTCCTCTGTGGGAGCAGCTGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGGAGAGCAGGGTCCCTaGGAGCCCGTGGAGCCGCCT +
Preference number: 5 (lower is better)
Translates to: LPPLWEQLEGRRETQPAFGEQGP*EPVEPP
Trigger: AGGCGGCTCCACGGGCTCCAAGGGACCCTGCTCTCC...AAAAGCGGGCTGTGTTTCTCTTCTACCTTCCAGCTGCTCCCACAGAGGAGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376288.3
CDS-3UTR CAA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGCTGGAGCCACAGGGCTaGGCACCAGCGGAGGGATCA +
Preference number: 5 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQLEPQG*APAEGS
Trigger: TGATCCCTCCGCTGGTGCCAAGCCCTGTGGCTCCAG...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CAA 90 bp GGTATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCGGAGAGCAGGGTCCCTaGGAGCCCGTGGAGCCGCCT +
Preference number: 5 (lower is better)
Translates to: GITSSGVRGALRAFQGFPGEQGP*EPVEPP
Trigger: AGGCGGCTCCACGGGCTCCAAGGGACCCTGCTCTCC...GGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTATACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CAA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGCTACAGGGACGCTGGTaGGAGCTGACGCTTTGGCCA +
Preference number: 5 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQLQGRW*ELTLWP
Trigger: TGGCCAAAGCGTCAGCTCCAACCAGCGTCCCTGTAG...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS TCA 90 bp TGGTTGGCAGAGCAGAGCCATTCCCTACTTGGAAGCTGCTGCTGCTaGACTGAAAGCTGCTGCTGCTGCTCGAATGAGAGCTGCTGCCCG +
Preference number: 5 (lower is better)
Translates to: WLAEQSHSLLGSCCC*TESCCCCSNESCCP
Trigger: CGGGCAGCAGCTCTCATTCGAGCAGCAGCAGCAGCTTTCAGTTCAGCAGCAGCAGCTTCCAAGTAGGGAATGGCTCTGCTCTGCCAACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259726.6
CDS TCA 90 bp AGCCACCCACCACCTCGTAGCCACCATAGGATTTGTCTACAGAGGTaGTTGGGGGACAGGGCTTGCCTGGAAGGCCACCATTGCTACAGG +
Preference number: 5 (lower is better)
Translates to: SHPPPRSHHRICLQR*LGDRACLEGHHCYR
Trigger: CCTGTAGCAATGGTGGCCTTCCAGGCAAGCCCTGTCCCCCAATCACCTCTGTAGACAAATCCTATGGTGGCTACGAGGTGGTGGGTGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS CCA 90 bp TGGGAATACCCCGTTCCTGGCTTAAAAGATCCTGCAGAACCACCCTaGGCAATGCTGGATCCGCTGGAGCTACCACTGGAGCCACCACCA +
Preference number: 5 (lower is better)
Translates to: WEYPVPGLKDPAEPP*AMLDPLELPLEPPP
Trigger: TGGTGGTGGCTCCAGTGGTAGCTCCAGCGGATCCAGCATTGCCCAGGGTGGTTCTGCAGGATCTTTTAAGCCAGGAACGGGGTATTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS GCA 90 bp GGAGTAGCTGACCTGGGAATACCCCGTTCCTGGCTTAAAAGATCCTaGAGAACCACCCTGGGCAATGCTGGATCCGCTGGAGCTACCACT +
Preference number: 5 (lower is better)
Translates to: GVADLGIPRSWLKRS*RTTLGNAGSAGATT
Trigger: AGTGGTAGCTCCAGCGGATCCAGCATTGCCCAGGGTGGTTCTGCAGGATCTTTTAAGCCAGGAACGGGGTATTCCCAGGTCAGCTACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS CCA 90 bp AGAGCCAGATCCGGAGGAGTAGCTGACCTGGGAATACCCCGTTCCTaGCTTAAAAGATCCTGCAGAACCACCCTGGGCAATGCTGGATCC +
Preference number: 5 (lower is better)
Translates to: RARSGGVADLGIPRS*LKRSCRTTLGNAGS
Trigger: GGATCCAGCATTGCCCAGGGTGGTTCTGCAGGATCTTTTAAGCCAGGAACGGGGTATTCCCAGGTCAGCTACTCCTCCGGATCTGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CAA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGCTGGGGATGATGGGGTaGCTGGAGAAGTATTTGCCC +
Preference number: 5 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQLGMMG*LEKYLP
Trigger: GGGCAAATACTTCTCCAGCAACCCCATCATCCCCAG...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CAA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGAGGAGAGCAGGGTCCCTaGGAGCCCGTGGAGCCGCCT +
Preference number: 5 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRGEQGP*EPVEPP
Trigger: AGGCGGCTCCACGGGCTCCAAGGGACCCTGCTCTCC...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CAA 90 bp ATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGTCTGGAGCCACAGGGCTaGGCACCAGCGGAGGGATCA +
Preference number: 5 (lower is better)
Translates to: ITSSGVRGALRAFQGFPSLEPQG*APAEGS
Trigger: TGATCCCTCCGCTGGTGCCAAGCCCTGTGGCTCCAG...ACTGGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS TCA 90 bp TGGTTGGCAGAGCAGAGCCATTCCCTACTTGGAAGCTGCTGCTGCTaGACTGAAAGCTGCTGCTGCTGCTCGAATGAGAGCTGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: WLAEQSHSLLGSCCC*TESCCCCSNESCCF
Trigger: GAAGCAGCAGCTCTCATTCGAGCAGCAGCAGCAGCTTTCAGTTCAGCAGCAGCAGCTTCCAAGTAGGGAATGGCTCTGCTCTGCCAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CAA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGAGAGCCATTCCCTACTaGGAAGCTGCTGCTGCTGAA +
Preference number: 5 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQRAIPY*EAAAAE
Trigger: TTCAGCAGCAGCAGCTTCCAAGTAGGGAATGGCTCT...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CAA 90 bp GGTATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCGTTGGAGCTGACGCTTaGGCCACTGCTGGATACCCC +
Preference number: 5 (lower is better)
Translates to: GITSSGVRGALRAFQGFPVGADA*ATAGYP
Trigger: GGGGTATCCAGCAGTGGCCAAAGCGTCAGCTCCAAC...GGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTATACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CAA 90 bp TATTGTCTTCCTCCTCTGTGGGAGCAGCTGGAAGGTAGAAGAGAAACACAGCCCCTACAGGGACGCTGGTaGGAGCTGACGCTTTGGCCA +
Preference number: 5 (lower is better)
Translates to: YCLPPLWEQLEGRRETQPLQGRW*ELTLWP
Trigger: TGGCCAAAGCGTCAGCTCCAACCAGCGTCCCTGTAG...GGGCTGTGTTTCTCTTCTACCTTCCAGCTGCTCCCACAGAGGAGGAAGACAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376288.3
CDS CCA 90 bp GTCCAGGCTGGGAAGGGTTTAGTATTCCGCGGTAAGAGTTGTCATTaGTTGGCAGAGCAGAGCCATTCCCTACTTGGAAGCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: VQAGKGLVFRGKSCH*LAEQSHSLLGSCCC
Trigger: GCAGCAGCAGCTTCCAAGTAGGGAATGGCTCTGCTCTGCCAACCAATGACAACTCTTACCGCGGAATACTAAACCCTTCCCAGCCTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CAA 90 bp ATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGTGTTGGAGCTGACGCTTaGGCCACTGCTGGATACCCC +
Preference number: 5 (lower is better)
Translates to: ITSSGVRGALRAFQGFPSVGADA*ATAGYP
Trigger: GGGGTATCCAGCAGTGGCCAAAGCGTCAGCTCCAAC...ACTGGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CAA 90 bp ATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGTCTACAGGGACGCTGGTaGGAGCTGACGCTTTGGCCA +
Preference number: 5 (lower is better)
Translates to: ITSSGVRGALRAFQGFPSLQGRW*ELTLWP
Trigger: TGGCCAAAGCGTCAGCTCCAACCAGCGTCCCTGTAG...ACTGGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CAA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGACTGGAGCCACAGGGCTaGGCACCAGCGGAGGGATCA +
Preference number: 5 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRLEPQG*APAEGS
Trigger: TGATCCCTCCGCTGGTGCCAAGCCCTGTGGCTCCAG...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CAA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGAGCAGAACCACTCTTTaGGGAAGGAGGGAAACTGAG +
Preference number: 5 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQSRTTL*GRRETE
Trigger: CTCAGTTTCCCTCCTTCCCAAAAGAGTGGTTCTGCT...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CAA 90 bp GGTATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCCTGGGGATGATGGGGTaGCTGGAGAAGTATTTGCCC +
Preference number: 5 (lower is better)
Translates to: GITSSGVRGALRAFQGFPLGMMG*LEKYLP
Trigger: GGGCAAATACTTCTCCAGCAACCCCATCATCCCCAG...GGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTATACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CAA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGAGTTGGAGCTGACGCTTaGGCCACTGCTGGATACCCC +
Preference number: 5 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRVGADA*ATAGYP
Trigger: GGGGTATCCAGCAGTGGCCAAAGCGTCAGCTCCAAC...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CAA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGACTACAGGGACGCTGGTaGGAGCTGACGCTTTGGCCA +
Preference number: 5 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRLQGRW*ELTLWP
Trigger: TGGCCAAAGCGTCAGCTCCAACCAGCGTCCCTGTAG...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CAA 90 bp ATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGTCTGGGGATGATGGGGTaGCTGGAGAAGTATTTGCCC +
Preference number: 5 (lower is better)
Translates to: ITSSGVRGALRAFQGFPSLGMMG*LEKYLP
Trigger: GGGCAAATACTTCTCCAGCAACCCCATCATCCCCAG...ACTGGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CAA 90 bp GGTATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCGCTGAGATAAGGGCCTaGAGAGGCAATGGGTGTGTT +
Preference number: 5 (lower is better)
Translates to: GITSSGVRGALRAFQGFPAEIRA*RGNGCV
Trigger: AACACACCCATTGCCTCTCAAGGCCCTTATCTCAGC...GGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CAA 90 bp ATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGTAGAGCCATTCCCTACTaGGAAGCTGCTGCTGCTGAA +
Preference number: 5 (lower is better)
Translates to: ITSSGVRGALRAFQGFPSRAIPY*EAAAAE
Trigger: TTCAGCAGCAGCAGCTTCCAAGTAGGGAATGGCTCT...ACTGGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CAA 90 bp AAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGAACACAGAGACGTTGGAGCTGACGCTTaGGCCACTGCTGGATACCCC +
Preference number: 5 (lower is better)
Translates to: KVEEKHSPLLKENEEHRDVGADA*ATAGYP
Trigger: GGGGTATCCAGCAGTGGCCAAAGCGTCAGCTCCAAC...GTCTCTGTGTTCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376288.3
CDS-3UTR CAA 90 bp GGTATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGCAGAACCACTCTTTaGGGAAGGAGGGAAACTGAG +
Preference number: 5 (lower is better)
Translates to: GITSSGVRGALRAFQGFPSRTTL*GRRETE
Trigger: CTCAGTTTCCCTCCTTCCCAAAAGAGTGGTTCTGCT...GGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CAA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGACTGGGGATGATGGGGTaGCTGGAGAAGTATTTGCCC +
Preference number: 5 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRLGMMG*LEKYLP
Trigger: GGGCAAATACTTCTCCAGCAACCCCATCATCCCCAG...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CAA 90 bp ATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGTAGCAGAACCACTCTTTaGGGAAGGAGGGAAACTGAG +
Preference number: 5 (lower is better)
Translates to: ITSSGVRGALRAFQGFPSSRTTL*GRRETE
Trigger: CTCAGTTTCCCTCCTTCCCAAAAGAGTGGTTCTGCT...ACTGGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CAA 90 bp GGTATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAAACACAGCCCGCTTTaGAAGGAAAATGAGGGACAC +
Preference number: 5 (lower is better)
Translates to: GITSSGVRGALRAFQGFPKHSPL*KENEGH
Trigger: GTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTT...GGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTATACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CAA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGAAGAGCCATTCCCTACTaGGAAGCTGCTGCTGCTGAA +
Preference number: 5 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRRAIPY*EAAAAE
Trigger: TTCAGCAGCAGCAGCTTCCAAGTAGGGAATGGCTCT...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CAA 90 bp AGCAGCTGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGAAGCTGAGATAAGGGCCTaGAGAGGCAATGGGTGTGTT +
Preference number: 5 (lower is better)
Translates to: SSWKVEEKHSPLLKENEEAEIRA*RGNGCV
Trigger: AACACACCCATTGCCTCTCAAGGCCCTTATCTCAGC...TTCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCAGCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376288.3
CDS-3UTR CAA 90 bp GCACCTAGTCCCCACAGTTTACTGAGCCATCTGTCCAGGATCCAGGGACAGCAGTTCAACAAATATTTATaGTCTTCCTCCTCTGTGGGA +
Preference number: 5 (lower is better)
Translates to: APSPHSLLSHLSRIQGQQFNKYL*SSSSVG
Trigger: TCCCACAGAGGAGGAAGACAATAAATATTTGTTGAA...CTGCTGTCCCTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000457875.2
CDS-3UTR CAA 90 bp TATTGTCTTCCTCCTCTGTGGGAGCAGCTGGAAGGTAGAAGAGAAACACAGCCCAAACACAGCCCGCTTTaGAAGGAAAATGAGGAACAC +
Preference number: 5 (lower is better)
Translates to: YCLPPLWEQLEGRRETQPKHSPL*KENEEH
Trigger: GTGTTCCTCATTTTCCTTCAAAAGCGGGCTGTGTTT...GGGCTGTGTTTCTCTTCTACCTTCCAGCTGCTCCCACAGAGGAGGAAGACAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376288.3
CDS-3UTR CAA 90 bp ATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGTAAACACAGCCCGCTTTaGAAGGAAAATGAGGGACAC +
Preference number: 5 (lower is better)
Translates to: ITSSGVRGALRAFQGFPSKHSPL*KENEGH
Trigger: GTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTT...ACTGGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CAA 90 bp AGGAGCTGGAAGGTAGAAGAGAAATACAGCCCGCTTTTGAAGGAAAATGAGGAAAGAGCCATTCCCTACTaGGAAGCTGCTGCTGCTGAA +
Preference number: 5 (lower is better)
Translates to: RSWKVEEKYSPLLKENEERAIPY*EAAAAE
Trigger: TTCAGCAGCAGCAGCTTCCAAGTAGGGAATGGCTCT...TTCCTCATTTTCCTTCAAAAGCGGGCTGTATTTCTCTTCTACCTTCCAGCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259726.6
CDS-3UTR CAA 90 bp AAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGAACACAGAGACAGAGCCATTCCCTACTaGGAAGCTGCTGCTGCTGAA +
Preference number: 5 (lower is better)
Translates to: KVEEKHSPLLKENEEHRDRAIPY*EAAAAE
Trigger: TTCAGCAGCAGCAGCTTCCAAGTAGGGAATGGCTCT...GTCTCTGTGTTCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376288.3
CDS-3UTR CAA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGAAGTGTATGTGCTTGTTaGTGCCCAAGGCATGCACAC +
Preference number: 5 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRSVCAC*CPRHAH
Trigger: GTGTGCATGCCTTGGGCACAAACAAGCACATACACT...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CAA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGAAGCAGAACCACTCTTTaGGGAAGGAGGGAAACTGAG +
Preference number: 5 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRSRTTL*GRRETE
Trigger: CTCAGTTTCCCTCCTTCCCAAAAGAGTGGTTCTGCT...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CAA 90 bp GGTATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCTTGACTTTGCTTTATTaGGTAAAGGGGAAGAGGAAG +
Preference number: 5 (lower is better)
Translates to: GITSSGVRGALRAFQGFPLTLLY*VKGKRK
Trigger: CTTCCTCTTCCCCTTTACCAAATAAAGCAAAGTCAA...GGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTATACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CAA 90 bp GGTATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCGATGATGGTTTGACTTaGCTTTATTTGGTAAAGGGG +
Preference number: 5 (lower is better)
Translates to: GITSSGVRGALRAFQGFPDDGLT*LYLVKG
Trigger: CCCCTTTACCAAATAAAGCAAAGTCAAACCATCATC...GGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTATACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CAA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGAAAACACAGCCCGCTTTaGAAGGAAAATGAGGGACAC +
Preference number: 5 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRKHSPL*KENEGH
Trigger: GTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTT...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CAA 90 bp AAGGTAGAAGAGAAATACAGCCCGCTTTTGAAGGAAAATGAGGAACACAGAGACAGCAGAACCACTCTTTaGGGAAGGAGGGAAACTGAG +
Preference number: 5 (lower is better)
Translates to: KVEEKYSPLLKENEEHRDSRTTL*GRRETE
Trigger: CTCAGTTTCCCTCCTTCCCAAAAGAGTGGTTCTGCT...GTCTCTGTGTTCCTCATTTTCCTTCAAAAGCGGGCTGTATTTCTCTTCTACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259726.6
CDS-3UTR CAA 90 bp ATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCAGTGATGATGGTTTGACTTaGCTTTATTTGGTAAAGGGG +
Preference number: 5 (lower is better)
Translates to: ITSSGVRGALRAFQGFPSDDGLT*LYLVKG
Trigger: CCCCTTTACCAAATAAAGCAAAGTCAAACCATCATC...ACTGGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CAA 90 bp GGTATAACTTCTTCAGGCGTCAGAGGTGCTCTGAGAGCATTTCAGGGGTTTCCCTTCAACAAATATTTATaGTCTTCCTCCTCTGTGGGA +
Preference number: 5 (lower is better)
Translates to: GITSSGVRGALRAFQGFPFNKYL*SSSSVG
Trigger: TCCCACAGAGGAGGAAGACAATAAATATTTGTTGAA...GGGAAACCCCTGAAATGCTCTCAGAGCACCTCTGACGCCTGAAGAAGTTATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000457875.2
CDS-3UTR CAA 90 bp TATTGTCTTCCTCCTCTGTGGGAGCAGCTGGAAGGTAGAAGAGAAACACAGCCCTTCAACAAATATTTATaGTCTTCCTCCTCTGTGGGA +
Preference number: 5 (lower is better)
Translates to: YCLPPLWEQLEGRRETQPFNKYL*SSSSVG
Trigger: TCCCACAGAGGAGGAAGACAATAAATATTTGTTGAA...GGGCTGTGTTTCTCTTCTACCTTCCAGCTGCTCCCACAGAGGAGGAAGACAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376288.3
CDS-3UTR CAA 90 bp TGGAAGGTAGAAGAGAAACACAGCCCGCTTTTGAAGGAAAATGAGGGACACAGATTGACTTTGCTTTATTaGGTAAAGGGGAAGAGGAAG +
Preference number: 5 (lower is better)
Translates to: WKVEEKHSPLLKENEGHRLTLLY*VKGKRK
Trigger: CTTCCTCTTCCCCTTTACCAAATAAAGCAAAGTCAA...TCTGTGTCCCTCATTTTCCTTCAAAAGCGGGCTGTGTTTCTCTTCTACCTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS-3UTR CAA 90 bp AGGAGCTGGAAGGTAGAAGAGAAATACAGCCCGCTTTTGAAGGAAAATGAGGAAAAATACAGCCCGCTTTaGAAGGAAAATGAGGAACAC +
Preference number: 5 (lower is better)
Translates to: RSWKVEEKYSPLLKENEEKYSPL*KENEEH
Trigger: GTGTTCCTCATTTTCCTTCAAAAGCGGGCTGTATTT...TTCCTCATTTTCCTTCAAAAGCGGGCTGTATTTCTCTTCTACCTTCCAGCTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000259726.6
CDS CCA 72 bp TGGGGACTCGAGAACTGGAGGGAGAGCAGGGTCCCTTaGAGCCCGTGGAGCCGCCTCCACAGAGCTGGACCC +
Preference number: 6 (lower is better)
Translates to: WGLENWRESRVP*SPWSRLHRAGP
Trigger: GGGTCCAGCTCTGTGGAGGCGGCTCCACGGGCTCCAAGGGACCCTGCTCTCCCTCCAGTTCTCGAGTCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS CAA 72 bp CTGGGGACTCGAGAACTGGAGGGAGAGCAGGGTCCCTaGGAGCCCGTGGAGCCGCCTCCACAGAGCTGGACC +
Preference number: 6 (lower is better)
Translates to: LGTRELEGEQGP*EPVEPPPQSWT
Trigger: GGTCCAGCTCTGTGGAGGCGGCTCCACGGGCTCCAAGGGACCCTGCTCTCCCTCCAGTTCTCGAGTCCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS CAA 90 bp CTAGAACTGCTGGGGACTCGAGAACTGGAGGGAGAGCAGGGTCCCTaGGAGCCCGTGGAGCCGCCTCCACAGAGCTGGACCCCACCAGTC +
Preference number: 6 (lower is better)
Translates to: LELLGTRELEGEQGP*EPVEPPPQSWTPPV
Trigger: GACTGGTGGGGTCCAGCTCTGTGGAGGCGGCTCCACGGGCTCCAAGGGACCCTGCTCTCCCTCCAGTTCTCGAGTCCCCAGCAGTTCTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS GCA 72 bp TATCCCGGATGGAGCGGCAGGGGATCTTTCCAGCACTaGTGGAGCCACAGGGCTTGGCACCAGCGGAGGGAT +
Preference number: 6 (lower is better)
Translates to: YPGWSGRGSFQH*WSHRAWHQRRD
Trigger: ATCCCTCCGCTGGTGCCAAGCCCTGTGGCTCCAGCAGTGCTGGAAAGATCCCCTGCCGCTCCATCCGGGATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS CCA 72 bp GCCCCAGAGGCTTCACTTGGGCTAGGATATCCCGGATaGAGCGGCAGGGGATCTTTCCAGCACTGCTGGAGC +
Preference number: 6 (lower is better)
Translates to: APEASLGLGYPG*SGRGSFQHCWS
Trigger: GCTCCAGCAGTGCTGGAAAGATCCCCTGCCGCTCCATCCGGGATATCCTAGCCCAAGTGAAGCCTCTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS CCA 72 bp CAGGGAGAGTCGGGGATGTCCGAACTACAGGGACGCTaGTTGGAGCTGACGCTTTGGCCACTGCTGGATACC +
Preference number: 6 (lower is better)
Translates to: QGESGMSELQGR*LELTLWPLLDT
Trigger: GGTATCCAGCAGTGGCCAAAGCGTCAGCTCCAACCAGCGTCCCTGTAGTTCGGACATCCCCGACTCTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS CAA 72 bp GGAGAGTCGGGGATGTCCGAACTACAGGGACGCTGGTaGGAGCTGACGCTTTGGCCACTGCTGGATACCCCA +
Preference number: 6 (lower is better)
Translates to: GESGMSELQGRW*ELTLWPLLDTP
Trigger: TGGGGTATCCAGCAGTGGCCAAAGCGTCAGCTCCAACCAGCGTCCCTGTAGTTCGGACATCCCCGACTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS CCA 72 bp CCCGTTCCTGGCTTAAAAGATCCTGCAGAACCACCCTaGGCAATGCTGGATCCGCTGGAGCTACCACTGGAG +
Preference number: 6 (lower is better)
Translates to: PVPGLKDPAEPP*AMLDPLELPLE
Trigger: CTCCAGTGGTAGCTCCAGCGGATCCAGCATTGCCCAGGGTGGTTCTGCAGGATCTTTTAAGCCAGGAACGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS TCA 72 bp CCACCTCGTAGCCACCATAGGATTTGTCTACAGAGGTaGTTGGGGGACAGGGCTTGCCTGGAAGGCCACCAT +
Preference number: 6 (lower is better)
Translates to: PPRSHHRICLQR*LGDRACLEGHH
Trigger: ATGGTGGCCTTCCAGGCAAGCCCTGTCCCCCAATCACCTCTGTAGACAAATCCTATGGTGGCTACGAGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS GCA 72 bp GACCTGGGAATACCCCGTTCCTGGCTTAAAAGATCCTaGAGAACCACCCTGGGCAATGCTGGATCCGCTGGA +
Preference number: 6 (lower is better)
Translates to: DLGIPRSWLKRS*RTTLGNAGSAG
Trigger: TCCAGCGGATCCAGCATTGCCCAGGGTGGTTCTGCAGGATCTTTTAAGCCAGGAACGGGGTATTCCCAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS TCA 72 bp GAGCAGAGCCATTCCCTACTTGGAAGCTGCTGCTGCTaGACTGAAAGCTGCTGCTGCTGCTCGAATGAGAGC +
Preference number: 6 (lower is better)
Translates to: EQSHSLLGSCCC*TESCCCCSNES
Trigger: GCTCTCATTCGAGCAGCAGCAGCAGCTTTCAGTTCAGCAGCAGCAGCTTCCAAGTAGGGAATGGCTCTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS CCA 72 bp TCCGGAGGAGTAGCTGACCTGGGAATACCCCGTTCCTaGCTTAAAAGATCCTGCAGAACCACCCTGGGCAAT +
Preference number: 6 (lower is better)
Translates to: SGGVADLGIPRS*LKRSCRTTLGN
Trigger: ATTGCCCAGGGTGGTTCTGCAGGATCTTTTAAGCCAGGAACGGGGTATTCCCAGGTCAGCTACTCCTCCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2
CDS CCA 72 bp GGGAAGGGTTTAGTATTCCGCGGTAAGAGTTGTCATTaGTTGGCAGAGCAGAGCCATTCCCTACTTGGAAGC +
Preference number: 6 (lower is better)
Translates to: GKGLVFRGKSCH*LAEQSHSLLGS
Trigger: GCTTCCAAGTAGGGAATGGCTCTGCTCTGCCAACCAATGACAACTCTTACCGCGGAATACTAAACCCTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259726.6
ENST00000376288.3
ENST00000383531.4
ENST00000418599.2
ENST00000445893.2
ENST00000457875.2