RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDKN1C (Homo sapiens)

Ensembl gene IDs: ENSG00000129757, ENSG00000273707

Ensembl transcript IDs: ENST00000313407.10, ENST00000380725.2, ENST00000414822.8, ENST00000430149.3, ENST00000440480.8, ENST00000471157.2, ENST00000616138.2, ENST00000631604.1, ENST00000631746.1, ENST00000633020.1, ENST00000647251.1, ENST00000681969.1

Found 506 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AAACCGAACGCTGCTCTGCGGCAGCCGCCGCCGGTTGCTGCTACATaGACGGTCCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGC +
Preference number: 1 (lower is better)
Translates to: KPNAALRQPPPVAAT*TVPAEAQRPSNVRC
Trigger: GCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGAGCAGCGTTCGGTTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
3UTR GCA 90 bp AAAAACAAAACCGAACGCTGCTCTGCGGCAGCCGCCGCCGGTTGCTaGTACATGAACGGTCCCAGCCGAGGCCCAGCGCCCTTCCAACGT +
Preference number: 1 (lower is better)
Translates to: KNKTERCSAAAAAGC*YMNGPSRGPAPFQR
Trigger: ACGTTGGAAGGGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGAGCAGCGTTCGGTTTTGTTTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
3UTR CCA 90 bp GAGACAGCGAAAGCGCGAAGAGACTGCAAGCTAGATGGGCATGTATaGCAGCTACAGCTTGTGAGTGACCCCCTTCCCCAGAGTCCGCGA +
Preference number: 1 (lower is better)
Translates to: ETAKARRDCKLDGHV*QLQLVSDPLPQSPR
Trigger: TCGCGGACTCTGGGGAAGGGGGTCACTCACAAGCTGTAGCTGCCATACATGCCCATCTAGCTTGCAGTCTCTTCGCGCTTTCGCTGTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
3UTR GCA 90 bp ATAAACACAGTCATAATAAGAGAGACAGCGAAAGCGCGAAGAGACTaGAAGCTAGATGGGCATGTATGGCAGCTACAGCTTGTGAGTGAC +
Preference number: 1 (lower is better)
Translates to: INTVIIRETAKARRD*KLDGHVWQLQLVSD
Trigger: GTCACTCACAAGCTGTAGCTGCCATACATGCCCATCTAGCTTGCAGTCTCTTCGCGCTTTCGCTGTCTCTCTTATTATGACTGTGTTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
3UTR CCA 90 bp GAGATGGAGAGTGCCTTTGGCATAACCAATAACCGAGCTAGTGCGTaGCAGAGCGGTCCACGCCTGGACATAAATAGAAAATATAAGTTA +
Preference number: 1 (lower is better)
Translates to: EMESAFGITNNRASA*QSGPRLDINRKYKL
Trigger: TAACTTATATTTTCTATTTATGTCCAGGCGTGGACCGCTCTGCCACGCACTAGCTCGGTTATTGGTTATGCCAAAGGCACTCTCCATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
3UTR CCA 90 bp AGAGTCCGCGATGAAAATAAAGTTACACTTGTCAATAACCAGATGTaGGAGATGGAGAGTGCCTTTGGCATAACCAATAACCGAGCTAGT +
Preference number: 1 (lower is better)
Translates to: RVRDENKVTLVNNQM*EMESAFGITNNRAS
Trigger: ACTAGCTCGGTTATTGGTTATGCCAAAGGCACTCTCCATCTCCCACATCTGGTTATTGACAAGTGTAACTTTATTTTCATCGCGGACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
3UTR-3UTR GCA 90 bp CTCTGCGGCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCCCTTCCAACGTCCGCTaGCCCGGCAGGTTCCCTCGG +
Preference number: 2 (lower is better)
Translates to: LCGSRRRLLLHERSQPRPPSNVR*PGRFPR
Trigger: CCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGG...GGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
3UTR-3UTR GCA 90 bp GGGCATGTATGGCAGCTACAGCTTGTGAGTGACCCCCTTCCCCAGAGTCCGCGACCTTCCAACGTCCGCTaGCCCGGCAGGTTCCCTCGG +
Preference number: 2 (lower is better)
Translates to: GHVWQLQLVSDPLPQSPRPSNVR*PGRFPR
Trigger: CCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGG...TCGCGGACTCTGGGGAAGGGGGTCACTCACAAGCTGTAGCTGCCATACATGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
3UTR-3UTR GCA 90 bp GCCTTTGGCATAACCAATAACCGAGCTAGTGCGTGGCAGAGCGGTCCACGCCTGCCTTCCAACGTCCGCTaGCCCGGCAGGTTCCCTCGG +
Preference number: 2 (lower is better)
Translates to: AFGITNNRASAWQSGPRLPSNVR*PGRFPR
Trigger: CCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGG...CAGGCGTGGACCGCTCTGCCACGCACTAGCTCGGTTATTGGTTATGCCAAAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
3UTR-3UTR GCA 90 bp GGGCATGTATGGCAGCTACAGCTTGTGAGTGACCCCCTTCCCCAGAGTCCGCGAGCAGCCGCCGCCGGTTaGTGCTACATGAACGGTCCC +
Preference number: 2 (lower is better)
Translates to: GHVWQLQLVSDPLPQSPRAAAAG*CYMNGP
Trigger: GGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGC...TCGCGGACTCTGGGGAAGGGGGTCACTCACAAGCTGTAGCTGCCATACATGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
3UTR-3UTR GCA 90 bp TTTGGCATAACCAATAACCGAGCTAGTGCGTGGCAGAGCGGTCCACGCCTGGACAACCGAACGCTGCTCTaGGGCAGCCGCCGCCGGTTG +
Preference number: 2 (lower is better)
Translates to: FGITNNRASAWQSGPRLDNRTLL*GSRRRL
Trigger: CAACCGGCGGCGGCTGCCGCAGAGCAGCGTTCGGTT...GTCCAGGCGTGGACCGCTCTGCCACGCACTAGCTCGGTTATTGGTTATGCCAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
3UTR-3UTR GCA 90 bp GGCATAACCAATAACCGAGCTAGTGCGTGGCAGAGCGGTCCACGCCTGGACATAGCCGCCGCCGGTTGCTaGTACATGAACGGTCCCAGC +
Preference number: 2 (lower is better)
Translates to: GITNNRASAWQSGPRLDIAAAGC*YMNGPS
Trigger: GCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGC...TATGTCCAGGCGTGGACCGCTCTGCCACGCACTAGCTCGGTTATTGGTTATGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
3UTR-3UTR GCA 90 bp GAGTTGCAGCATTTTTCGGCCTCTTTATTTAGAACCCGGCGGACGAGGGGCCGGGCCGCCGCCGGTTGCTaGTACATGAACGGTCCCAGC +
Preference number: 2 (lower is better)
Translates to: ELQHFSASLFRTRRTRGRAAAGC*YMNGPS
Trigger: GCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGC...CCGGCCCCTCGTCCGCCGGGTTCTAAATAAAGAGGCCGAAAAATGCTGCAACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414822.8
ENST00000616138.2
ENST00000631604.1
3UTR-3UTR GCA 90 bp GAGTTGCAGCATTTTTCGGCCTCTTTATTTAGAACCCGGCGGACGAGGGGCCGGGCAGCCGCCGCCGGTTaGTGCTACATGAACGGTCCC +
Preference number: 2 (lower is better)
Translates to: ELQHFSASLFRTRRTRGRAAAAG*CYMNGP
Trigger: GGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGC...CCGGCCCCTCGTCCGCCGGGTTCTAAATAAAGAGGCCGAAAAATGCTGCAACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414822.8
ENST00000616138.2
ENST00000631604.1
3UTR-3UTR GCA 90 bp ACAGCGAAAGCGCGAAGAGACTGCAAGCTAGATGGGCATGTATGGCAGCTACAGAACCGAACGCTGCTCTaGGGCAGCCGCCGCCGGTTG +
Preference number: 2 (lower is better)
Translates to: TAKARRDCKLDGHVWQLQNRTLL*GSRRRL
Trigger: CAACCGGCGGCGGCTGCCGCAGAGCAGCGTTCGGTT...CTGTAGCTGCCATACATGCCCATCTAGCTTGCAGTCTCTTCGCGCTTTCGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
3UTR-3UTR GCA 90 bp TTTGGCATAACCAATAACCGAGCTAGTGCGTGGCAGAGCGGTCCACGCCTGGACAACAAAACCGAACGCTaGTCTGCGGCAGCCGCCGCC +
Preference number: 2 (lower is better)
Translates to: FGITNNRASAWQSGPRLDNKTER*SAAAAA
Trigger: GGCGGCGGCTGCCGCAGAGCAGCGTTCGGTTTTGTT...GTCCAGGCGTGGACCGCTCTGCCACGCACTAGCTCGGTTATTGGTTATGCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
3UTR-3UTR TCA 90 bp GCGAAAGCGCGAAGAGACTGCAAGCTAGATGGGCATGTATGGCAGCTACAGCTTCCGGTTGCTGCTACATaGACGGTCCCAGCCGAGGCC +
Preference number: 2 (lower is better)
Translates to: AKARRDCKLDGHVWQLQLPVAAT*TVPAEA
Trigger: GGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGG...AAGCTGTAGCTGCCATACATGCCCATCTAGCTTGCAGTCTCTTCGCGCTTTCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
3UTR-3UTR TCA 90 bp GAGATGGAGAGTGCCTTTGGCATAACCAATAACCGAGCTAGTGCGTGGCAGAGCCCGGTTGCTGCTACATaGACGGTCCCAGCCGAGGCC +
Preference number: 2 (lower is better)
Translates to: EMESAFGITNNRASAWQSPVAAT*TVPAEA
Trigger: GGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGG...GCTCTGCCACGCACTAGCTCGGTTATTGGTTATGCCAAAGGCACTCTCCATCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
3UTR-3UTR GCA 90 bp GAAAGCGCGAAGAGACTGCAAGCTAGATGGGCATGTATGGCAGCTACAGCTTGTCCTTCCAACGTCCGCTaGCCCGGCAGGTTCCCTCGG +
Preference number: 2 (lower is better)
Translates to: ESAKRLQARWACMAATACPSNVR*PGRFPR
Trigger: CCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGG...ACAAGCTGTAGCTGCCATACATGCCCATCTAGCTTGCAGTCTCTTCGCGCTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
3UTR-3UTR CCA 90 bp CTAGATGGGCATGTATGGCAGCTACAGCTTGTGAGTGACCCCCTTCCCCAGAGTAACCGAGCTAGTGCGTaGCAGAGCGGTCCACGCCTG +
Preference number: 2 (lower is better)
Translates to: LDGHVWQLQLVSDPLPQSNRASA*QSGPRL
Trigger: CAGGCGTGGACCGCTCTGCCACGCACTAGCTCGGTT...ACTCTGGGGAAGGGGGTCACTCACAAGCTGTAGCTGCCATACATGCCCATCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
3UTR-3UTR GCA 90 bp GAAAGCGCGAAGAGACTGCAAGCTAGATGGGCATGTATGGCAGCTACAGCTTGTGCCGCCGCCGGTTGCTaGTACATGAACGGTCCCAGC +
Preference number: 2 (lower is better)
Translates to: ESAKRLQARWACMAATACAAAGC*YMNGPS
Trigger: GCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGC...ACAAGCTGTAGCTGCCATACATGCCCATCTAGCTTGCAGTCTCTTCGCGCTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
3UTR-3UTR GCA 90 bp GCGCGAAGAGACTGCAAGCTAGATGGGCATGTATGGCAGCTACAGCTTGTGAGTAACAAAACCGAACGCTaGTCTGCGGCAGCCGCCGCC +
Preference number: 2 (lower is better)
Translates to: ARRDCKLDGHVWQLQLVSNKTER*SAAAAA
Trigger: GGCGGCGGCTGCCGCAGAGCAGCGTTCGGTTTTGTT...ACTCACAAGCTGTAGCTGCCATACATGCCCATCTAGCTTGCAGTCTCTTCGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
3UTR-3UTR GCA 90 bp TGGGAGATGGAGAGTGCCTTTGGCATAACCAATAACCGAGCTAGTGCGTGGCAGAACAAAACCGAACGCTaGTCTGCGGCAGCCGCCGCC +
Preference number: 2 (lower is better)
Translates to: WEMESAFGITNNRASAWQNKTER*SAAAAA
Trigger: GGCGGCGGCTGCCGCAGAGCAGCGTTCGGTTTTGTT...CTGCCACGCACTAGCTCGGTTATTGGTTATGCCAAAGGCACTCTCCATCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
3UTR-3UTR GCA 90 bp CCCAGAGTCCGCGATGAAAATAAAGTTACACTTGTCAATAACCAGATGTGGGAGGCCGCCGCCGGTTGCTaGTACATGAACGGTCCCAGC +
Preference number: 2 (lower is better)
Translates to: PRVRDENKVTLVNNQMWEAAAGC*YMNGPS
Trigger: GCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGC...CTCCCACATCTGGTTATTGACAAGTGTAACTTTATTTTCATCGCGGACTCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
3UTR-3UTR GCA 90 bp GCGATGAAAATAAAGTTACACTTGTCAATAACCAGATGTGGGAGATGGAGAGTGAACCGAACGCTGCTCTaGGGCAGCCGCCGCCGGTTG +
Preference number: 2 (lower is better)
Translates to: AMKIKLHLSITRCGRWRVNRTLL*GSRRRL
Trigger: CAACCGGCGGCGGCTGCCGCAGAGCAGCGTTCGGTT...CACTCTCCATCTCCCACATCTGGTTATTGACAAGTGTAACTTTATTTTCATCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
3UTR-3UTR TCA 90 bp ACACCTTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATATAAAAAGACCGGTTGCTGCTACATaGACGGTCCCAGCCGAGGCC +
Preference number: 2 (lower is better)
Translates to: TPWDQCTFSCRIHLDIKRPVAAT*TVPAEA
Trigger: GGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGG...TCTTTTTATATCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCAAGGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
3UTR-3UTR GCA 90 bp TTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATATAAAAAGACGTTACCTTCCAACGTCCGCTaGCCCGGCAGGTTCCCTCGG +
Preference number: 2 (lower is better)
Translates to: LGPVYLLVQNTFRYKKTLPSNVR*PGRFPR
Trigger: CCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGG...TAACGTCTTTTTATATCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
3UTR-3UTR CCA 90 bp CCGGGGCAGTGGTACAGACGGCTCAGGAACCATTTTAACAGACTTGTCTTCAAGAGACTGCAAGCTAGATaGGCATGTATGGCAGCTACA +
Preference number: 2 (lower is better)
Translates to: PGQWYRRLRNHFNRLVFKRLQAR*ACMAAT
Trigger: TGTAGCTGCCATACATGCCCATCTAGCTTGCAGTCT...CTTGAAGACAAGTCTGTTAAAATGGTTCCTGAGCCGTCTGTACCACTGCCCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
3UTR-3UTR TCA 90 bp TTTACACCTTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATATAAAACCGGTTGCTGCTACATaGACGGTCCCAGCCGAGGCC +
Preference number: 2 (lower is better)
Translates to: FTPWDQCTFSCRIHLDIKPVAAT*TVPAEA
Trigger: GGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGG...TTTTATATCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCAAGGTGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
3UTR-3UTR GCA 90 bp TTTACACCTTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATATAAAAGCCGCCGCCGGTTGCTaGTACATGAACGGTCCCAGC +
Preference number: 2 (lower is better)
Translates to: FTPWDQCTFSCRIHLDIKAAAGC*YMNGPS
Trigger: GCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGC...TTTTATATCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCAAGGTGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
3UTR-3UTR GCA 90 bp TGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATATAAAAAGACGTTATGCCGCCGCCGGTTGCTaGTACATGAACGGTCCCAGC +
Preference number: 2 (lower is better)
Translates to: WDQCTFSCRIHLDIKRRYAAAGC*YMNGPS
Trigger: GCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGC...ATAACGTCTTTTTATATCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
3UTR-3UTR CCA 90 bp CCGGGGCAGTGGTACAGACGGCTCAGGAACCATTTTAACAGACTTGTCTTCAAGGTCAATAACCAGATGTaGGAGATGGAGAGTGCCTTT +
Preference number: 2 (lower is better)
Translates to: PGQWYRRLRNHFNRLVFKVNNQM*EMESAF
Trigger: AAAGGCACTCTCCATCTCCCACATCTGGTTATTGAC...CTTGAAGACAAGTCTGTTAAAATGGTTCCTGAGCCGTCTGTACCACTGCCCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
3UTR-3UTR GCA 90 bp AAGAGAGACAGCGAAAGCGCGAAGAGACTGCAAGCTAGATGGGCATGTATGGCACAGTGTACCTTCTCGTaGAGAATACATTTAGATATA +
Preference number: 2 (lower is better)
Translates to: KRDSESAKRLQARWACMAQCTFS*RIHLDI
Trigger: TATATCTAAATGTATTCTGCACGAGAAGGTACACTG...TGCCATACATGCCCATCTAGCTTGCAGTCTCTTCGCGCTTTCGCTGTCTCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
3UTR-3UTR GCA 90 bp ATGAAAATAAAGTTACACTTGTCAATAACCAGATGTGGGAGATGGAGAGTGCCTCAGTGTACCTTCTCGTaGAGAATACATTTAGATATA +
Preference number: 2 (lower is better)
Translates to: MKIKLHLSITRCGRWRVPQCTFS*RIHLDI
Trigger: TATATCTAAATGTATTCTGCACGAGAAGGTACACTG...AGGCACTCTCCATCTCCCACATCTGGTTATTGACAAGTGTAACTTTATTTTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
3UTR GCA 72 bp ACCGAACGCTGCTCTGCGGCAGCCGCCGCCGGTTGCTaGTACATGAACGGTCCCAGCCGAGGCCCAGCGCCC +
Preference number: 3 (lower is better)
Translates to: TERCSAAAAAGC*YMNGPSRGPAP
Trigger: GGGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGAGCAGCGTTCGGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
3UTR TCA 72 bp GCTGCTCTGCGGCAGCCGCCGCCGGTTGCTGCTACATaGACGGTCCCAGCCGAGGCCCAGCGCCCTTCCAAC +
Preference number: 3 (lower is better)
Translates to: AALRQPPPVAAT*TVPAEAQRPSN
Trigger: GTTGGAAGGGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGAGCAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
3UTR GCA 72 bp GTCCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTaGCCCGGCAGGTTCCCTCGGGGCTCTTTGGGCTTT +
Preference number: 3 (lower is better)
Translates to: VPAEAQRPSNVR*PGRFPRGSLGF
Trigger: AAAGCCCAAAGAGCCCCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414822.8
ENST00000633020.1
3UTR-3UTR CAA 90 bp TTAGAACCCGGCGGACGAGGGGCCGGGGCAGTGGTACAGACGGCTCAGGAACCAGGCAGCCGCCGCCGGTaGCTGCTACATGAACGGTCC +
Preference number: 3 (lower is better)
Translates to: LEPGGRGAGAVVQTAQEPGSRRR*LLHERS
Trigger: GGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCC...TGGTTCCTGAGCCGTCTGTACCACTGCCCCGGCCCCTCGTCCGCCGGGTTCTAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
3UTR GCA 72 bp AAAACCGAACGCTGCTCTGCGGCAGCCGCCGCCGGTTaGTGCTACATGAACGGTCCCAGCCGAGGCCCAGCG +
Preference number: 3 (lower is better)
Translates to: KTERCSAAAAAG*CYMNGPSRGPA
Trigger: CGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGAGCAGCGTTCGGTTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
3UTR-3UTR CAA 90 bp AGCGCGAAGAGACTGCAAGCTAGATGGGCATGTATGGCAGCTACAGCTTGTGAGGGCAGCCGCCGCCGGTaGCTGCTACATGAACGGTCC +
Preference number: 3 (lower is better)
Translates to: SAKRLQARWACMAATACEGSRRR*LLHERS
Trigger: GGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCC...CTCACAAGCTGTAGCTGCCATACATGCCCATCTAGCTTGCAGTCTCTTCGCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
3UTR CCA 72 bp AAAGCGCGAAGAGACTGCAAGCTAGATGGGCATGTATaGCAGCTACAGCTTGTGAGTGACCCCCTTCCCCAG +
Preference number: 3 (lower is better)
Translates to: KARRDCKLDGHV*QLQLVSDPLPQ
Trigger: CTGGGGAAGGGGGTCACTCACAAGCTGTAGCTGCCATACATGCCCATCTAGCTTGCAGTCTCTTCGCGCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
3UTR-3UTR CAA 90 bp CCCAGAGTCCGCGATGAAAATAAAGTTACACTTGTCAATAACCAGATGTGGGAGGGCAGCCGCCGCCGGTaGCTGCTACATGAACGGTCC +
Preference number: 3 (lower is better)
Translates to: PRVRDENKVTLVNNQMWEGSRRR*LLHERS
Trigger: GGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCC...CTCCCACATCTGGTTATTGACAAGTGTAACTTTATTTTCATCGCGGACTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
3UTR-3UTR CAA 90 bp AGTGCGTGGCAGAGCGGTCCACGCCTGGACATAAATAGAAAATATAAGTTAGTAGGCAGCCGCCGCCGGTaGCTGCTACATGAACGGTCC +
Preference number: 3 (lower is better)
Translates to: SAWQSGPRLDINRKYKLVGSRRR*LLHERS
Trigger: GGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCC...TACTAACTTATATTTTCTATTTATGTCCAGGCGTGGACCGCTCTGCCACGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
3UTR-3UTR CAA 90 bp AAGCTAGATGGGCATGTATGGCAGCTACAGCTTGTGAGTGACCCCCTTCCCCAGTTAAAGCTTTACACCTaGGGACCAGTGTACCTTCTC +
Preference number: 3 (lower is better)
Translates to: KLDGHVWQLQLVSDPLPQLKLYT*GPVYLL
Trigger: GAGAAGGTACACTGGTCCCAAGGTGTAAAGCTTTAA...CTGGGGAAGGGGGTCACTCACAAGCTGTAGCTGCCATACATGCCCATCTAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
3UTR CCA 72 bp AGTGCCTTTGGCATAACCAATAACCGAGCTAGTGCGTaGCAGAGCGGTCCACGCCTGGACATAAATAGAAAA +
Preference number: 3 (lower is better)
Translates to: SAFGITNNRASA*QSGPRLDINRK
Trigger: TTTTCTATTTATGTCCAGGCGTGGACCGCTCTGCCACGCACTAGCTCGGTTATTGGTTATGCCAAAGGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
3UTR GCA 72 bp GTCATAATAAGAGAGACAGCGAAAGCGCGAAGAGACTaGAAGCTAGATGGGCATGTATGGCAGCTACAGCTT +
Preference number: 3 (lower is better)
Translates to: VIIRETAKARRD*KLDGHVWQLQL
Trigger: AAGCTGTAGCTGCCATACATGCCCATCTAGCTTGCAGTCTCTTCGCGCTTTCGCTGTCTCTCTTATTATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
3UTR CCA 72 bp GATGAAAATAAAGTTACACTTGTCAATAACCAGATGTaGGAGATGGAGAGTGCCTTTGGCATAACCAATAAC +
Preference number: 3 (lower is better)
Translates to: DENKVTLVNNQM*EMESAFGITNN
Trigger: GTTATTGGTTATGCCAAAGGCACTCTCCATCTCCCACATCTGGTTATTGACAAGTGTAACTTTATTTTCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp GCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGGGCCCGGCCCGAAGAGGCTaGGGCAGGCGCTGGTGCGCA +
Preference number: 4 (lower is better)
Translates to: AEAQRPSNVRCPGRFPRGPARRG*GRRWCA
Trigger: TGCGCACCAGCGCCTGCCGCAGCCTCTTCGGGCCGG...GCCCCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp GCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGGGCGCCGCGCCCCCTCGATaGCTGCTGGCTAGCTCGCTC +
Preference number: 4 (lower is better)
Translates to: AEAQRPSNVRCPGRFPRGAAPPR*LLASSL
Trigger: GAGCGAGCTAGCCAGCAGGCATCGAGGGGGCGCGGC...GCCCCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp GCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCAGCGCCCTCGGCCAGGCGGGCCTaGAGCTCGCGGCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: AAAAGCCYMNGPSRGPAPSARRA*SSRLSS
Trigger: GGAGCTGAGCCGCGAGCTGCAGGCCCGCCTGGCCGA...GGGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp GCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGGGCAACCGAACGCTGCTCTaGGGCAGCCGCCGCCGGTTG +
Preference number: 4 (lower is better)
Translates to: AEAQRPSNVRCPGRFPRGNRTLL*GSRRRL
Trigger: CAACCGGCGGCGGCTGCCGCAGAGCAGCGTTCGGTT...GCCCCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR CCA 90 bp CCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGGGGACGCGTCGGACATaGCCCGGGGCTGCGCAAACG +
Preference number: 4 (lower is better)
Translates to: PAEAQRPSNVRCPGRFPRGTRRT*PGAAQT
Trigger: CGTTTGCGCAGCCCCGGGCCATGTCCGACGCGTCCC...CCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000414822.8
ENST00000430149.3
ENST00000616138.2
ENST00000633020.1
CDS-3UTR TCA 90 bp TCCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGCCCGGACAGCTTCTTaGTCGCCGCGCCGTTGGCGC +
Preference number: 4 (lower is better)
Translates to: SQPRPSALPTSAAPAGSLARTAS*SPRRWR
Trigger: GCGCCAACGGCGCGGCGATCAAGAAGCTGTCCGGGC...GAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000633020.1
CDS-3UTR GCA 90 bp AGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGGGAACGCCCAGCCCGCCTaGGCCCCCTTTATACGCGCG +
Preference number: 4 (lower is better)
Translates to: SRGPAPFQRPLPRQVPSGNAQPA*APFIRA
Trigger: CGCGCGTATAAAGGGGGCGCAGGCGGGCTGGGCGTT...CCCCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313407.10
ENST00000616138.2
CDS-3UTR GCA 90 bp GTCCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTGCCGCGCCCCCTCGATaGCTGCTGGCTAGCTCGCTC +
Preference number: 4 (lower is better)
Translates to: VPAEAQRPSNVRCPGRFPAAPPR*LLASSL
Trigger: GAGCGAGCTAGCCAGCAGGCATCGAGGGGGCGCGGC...AGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGGAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp CTCTGCGGCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCCCGGCCCGAAGAGGCTaGGGCAGGCGCTGGTGCGCA +
Preference number: 4 (lower is better)
Translates to: LCGSRRRLLLHERSQPRPPARRG*GRRWCA
Trigger: TGCGCACCAGCGCCTGCCGCAGCCTCTTCGGGCCGG...GGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp CCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGGGCTCTTTGGCCGGCCCGAAGAGGCTaGGGCAGGCGCTGGTGCGCA +
Preference number: 4 (lower is better)
Translates to: PSALPTSAAPAGSLGALWPARRG*GRRWCA
Trigger: TGCGCACCAGCGCCTGCCGCAGCCTCTTCGGGCCGG...CCAAAGAGCCCCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp CCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGTCCACTTCGGTCCACTaGAGGCGTCCAGGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: PSRGPAPFQRPLPRQVPSSTSVH*RRPGPR
Trigger: GCGGGGCCCTGGACGCCTGCAGTGGACCGAAGTGGA...CGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp CCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGCTCTTGCGCGGGGTCTaGTCCACCGAGCCCACGCCA +
Preference number: 4 (lower is better)
Translates to: PAEAQRPSNVRCPGRFPRLLRGV*STEPTP
Trigger: TGGCGTGGGCTCGGTGGAGCAGACCCCGCGCAAGAG...CCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp CCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGCTCACCGCAGCCTCTTaGGCGGGGTCTGCTCCACCG +
Preference number: 4 (lower is better)
Translates to: PSRGPAPFQRPLPRQVPSLTAAS*AGSAPP
Trigger: CGGTGGAGCAGACCCCGCGCAAGAGGCTGCGGTGAG...CGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp AGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGGGCCTTCCAACGTCCGCTaGCCCGGCAGGTTCCCTCGG +
Preference number: 4 (lower is better)
Translates to: SRGPAPFQRPLPRQVPSGPSNVR*PGRFPR
Trigger: CCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGG...CCCCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp CGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGGGCTCCCTTCCAACGTCCGCTaGCCCGGCAGGTTCCCTCGG +
Preference number: 4 (lower is better)
Translates to: RGPAPFQRPLPRQVPSGLPSNVR*PGRFPR
Trigger: CCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGG...GAGCCCCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp CCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGCCTTCCAACGTCCGCTaGCCCGGCAGGTTCCCTCGG +
Preference number: 4 (lower is better)
Translates to: PAEAQRPSNVRCPGRFPRPSNVR*PGRFPR
Trigger: CCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGG...CCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR CCA 90 bp CGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGGGCTCAGCGCACTTGGCCTGTaGAACGCCCAGCCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: RGPAPFQRPLPRQVPSGLSALGL*NAQPAC
Trigger: GCAGGCGGGCTGGGCGTTCCACAGGCCAAGTGCGCT...GAGCCCCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313407.10
ENST00000616138.2
CDS-3UTR CCA 90 bp CCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGCGGCTCAGCTCCTCGTaGTCCACCGGCCCGAAGAGG +
Preference number: 4 (lower is better)
Translates to: PAEAQRPSNVRCPGRFPRRLSSS*STGPKR
Trigger: CCTCTTCGGGCCGGTGGACCACGAGGAGCTGAGCCG...CCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR TCA 90 bp GCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGGGCTCTTTGGCCCGGACAGCTTCTTaGTCGCCGCGCCGTTGGCGC +
Preference number: 4 (lower is better)
Translates to: AQRPSNVRCPGRFPRGSLARTAS*SPRRWR
Trigger: GCGCCAACGGCGCGGCGATCAAGAAGCTGTCCGGGC...CAAAGAGCCCCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000633020.1
CDS-3UTR TCA 90 bp CCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGCCGGTTGCTGCTACATaGACGGTCCCAGCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: PSRGPAPFQRPLPRQVPSPVAAT*TVPAEA
Trigger: GGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGG...CGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp TCTGCGGCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCATCGGCCAGGCGGGCCTaGAGCTCGCGGCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SAAAAAGCCYMNGPSRGPSARRA*SSRLSS
Trigger: GGAGCTGAGCCGCGAGCTGCAGGCCCGCCTGGCCGA...TGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp GGCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCAGCGCCTCCACTTCGGTCCACTaGAGGCGTCCAGGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: GSRRRLLLHERSQPRPSASTSVH*RRPGPR
Trigger: GCGGGGCCCTGGACGCCTGCAGTGGACCGAAGTGGA...GGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp TCCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGGACACTAGGCAGCTaGTCCGGCGCCTCCTCGAGG +
Preference number: 4 (lower is better)
Translates to: SQPRPSALPTSAAPAGSLGTLGS*SGASSR
Trigger: CCTCGAGGAGGCGCCGGAGCAGCTGCCTAGTGTCCC...GAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000633020.1
CDS-3UTR GCA 90 bp TCCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCCTCACCGCAGCCTCTTaGGCGGGGTCTGCTCCACCG +
Preference number: 4 (lower is better)
Translates to: SQPRPSALPTSAAPAGSLLTAAS*AGSAPP
Trigger: CGGTGGAGCAGACCCCGCGCAAGAGGCTGCGGTGAG...GAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp GCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCAGCGCCCCCTTCCAACGTCCGCTaGCCCGGCAGGTTCCCTCGG +
Preference number: 4 (lower is better)
Translates to: AAAAGCCYMNGPSRGPAPPSNVR*PGRFPR
Trigger: CCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGG...GGGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp GGCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCAGCGCCAACCGAACGCTGCTCTaGGGCAGCCGCCGCCGGTTG +
Preference number: 4 (lower is better)
Translates to: GSRRRLLLHERSQPRPSANRTLL*GSRRRL
Trigger: CAACCGGCGGCGGCTGCCGCAGAGCAGCGTTCGGTT...GGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp GCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGGGCAACAAAACCGAACGCTaGTCTGCGGCAGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: AEAQRPSNVRCPGRFPRGNKTER*SAAAAA
Trigger: GGCGGCGGCTGCCGCAGAGCAGCGTTCGGTTTTGTT...GCCCCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp GCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCAGCGCCCTTCGCCCGACTCTGCGTGTaGGAGGGACGCGGCGGCTAC +
Preference number: 4 (lower is better)
Translates to: AAAGCCYMNGPSRGPAPFARLCV*EGRGGY
Trigger: GTAGCCGCCGCGTCCCTCGCACACGCAGAGTCGGGC...GAAGGGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414822.8
ENST00000430149.3
ENST00000616138.2
ENST00000633020.1
CDS-3UTR GCA 90 bp CTCTGCGGCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCGACATGGCCCGGGGCTaGGCAAACGCGGGCAGCGAG +
Preference number: 4 (lower is better)
Translates to: LCGSRRRLLLHERSQPRPDMARG*ANAGSE
Trigger: CTCGCTGCCCGCGTTTGCGCAGCCCCGGGCCATGTC...GGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414822.8
ENST00000430149.3
ENST00000616138.2
ENST00000633020.1
CDS-3UTR GCA 90 bp CCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGCTCCATCGTGGATGTaGTGCGGAGGGACGCGTCGG +
Preference number: 4 (lower is better)
Translates to: PSRGPAPFQRPLPRQVPSAPSWM*CGGTRR
Trigger: CCGACGCGTCCCTCCGCAGCACATCCACGATGGAGC...CGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414822.8
ENST00000430149.3
ENST00000616138.2
ENST00000633020.1
CDS-3UTR CCA 90 bp GCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCAGCGCCCAGCGCACTTGGCCTGTaGAACGCCCAGCCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: AAAAGCCYMNGPSRGPAPSALGL*NAQPAC
Trigger: GCAGGCGGGCTGGGCGTTCCACAGGCCAAGTGCGCT...GGGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313407.10
ENST00000616138.2
CDS-3UTR CCA 90 bp AGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGGGCGAGCACAGCGCACTTaGCCTGTGGAACGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: SRGPAPFQRPLPRQVPSGRAQRT*PVERPA
Trigger: GGCTGGGCGTTCCACAGGCCAAGTGCGCTGTGCTCG...CCCCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313407.10
ENST00000616138.2
CDS-3UTR CCA 90 bp CCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGGGCTCCCCTCGATGCCTGCTaGCTAGCTCGCTCGCTCAGG +
Preference number: 4 (lower is better)
Translates to: PRPSALPTSAAPAGSLGAPLDAC*LARSLR
Trigger: CCTGAGCGAGCGAGCTAGCCAGCAGGCATCGAGGGG...AGCCCCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR CCA 90 bp CCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGGCTGCGGCAGGCGCTaGTGCGCACTAGTACTGGGA +
Preference number: 4 (lower is better)
Translates to: PSRGPAPFQRPLPRQVPSGCGRR*CALVLG
Trigger: TCCCAGTACTAGTGCGCACCAGCGCCTGCCGCAGCC...CGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR CCA 90 bp GGCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCAGCGCCCGGCTCAGCTCCTCGTaGTCCACCGGCCCGAAGAGG +
Preference number: 4 (lower is better)
Translates to: GSRRRLLLHERSQPRPSARLSSS*STGPKR
Trigger: CCTCTTCGGGCCGGTGGACCACGAGGAGCTGAGCCG...GGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR TCA 90 bp CTGCTCTGCGGCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGGCCCGGACAGCTTCTTaGTCGCCGCGCCGTTGGCGC +
Preference number: 4 (lower is better)
Translates to: LLCGSRRRLLLHERSQPRARTAS*SPRRWR
Trigger: GCGCCAACGGCGCGGCGATCAAGAAGCTGTCCGGGC...CCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGAGCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000633020.1
CDS-3UTR GCA 90 bp GAACGCTGCTCTGCGGCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCCGGCCCGAAGAGGCTaGGGCAGGCGCTGGTGCGCA +
Preference number: 4 (lower is better)
Translates to: ERCSAAAAAGCCYMNGPSPARRG*GRRWCA
Trigger: TGCGCACCAGCGCCTGCCGCAGCCTCTTCGGGCCGG...GCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGAGCAGCGTTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp CCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGGGCTCTTTGGTCCACTTCGGTCCACTaGAGGCGTCCAGGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: PSALPTSAAPAGSLGALWSTSVH*RRPGPR
Trigger: GCGGGGCCCTGGACGCCTGCAGTGGACCGAAGTGGA...CCAAAGAGCCCCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp GCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCAGCGCCCTTCGGGACACTAGGCAGCTaGTCCGGCGCCTCCTCGAGG +
Preference number: 4 (lower is better)
Translates to: AAAGCCYMNGPSRGPAPFGTLGS*SGASSR
Trigger: CCTCGAGGAGGCGCCGGAGCAGCTGCCTAGTGTCCC...GAAGGGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000633020.1
CDS-3UTR GCA 90 bp GCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCAGCGCCCTTCCTCTTGCGCGGGGTCTaGTCCACCGAGCCCACGCCA +
Preference number: 4 (lower is better)
Translates to: AAAGCCYMNGPSRGPAPFLLRGV*STEPTP
Trigger: TGGCGTGGGCTCGGTGGAGCAGACCCCGCGCAAGAG...GAAGGGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp CATGAACGGTCCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCACCTTCCAACGTCCGCTaGCCCGGCAGGTTCCCTCGG +
Preference number: 4 (lower is better)
Translates to: HERSQPRPSALPTSAAPAPSNVR*PGRFPR
Trigger: CCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGG...TGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGGACCGTTCATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp GCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCAGCGCCCGCCGCCGCCGGTTGCTaGTACATGAACGGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: AAAAGCCYMNGPSRGPAPAAAGC*YMNGPS
Trigger: GCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGC...GGGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp GCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGGGCTCTTTGAACCGAACGCTGCTCTaGGGCAGCCGCCGCCGGTTG +
Preference number: 4 (lower is better)
Translates to: AQRPSNVRCPGRFPRGSLNRTLL*GSRRRL
Trigger: CAACCGGCGGCGGCTGCCGCAGAGCAGCGTTCGGTT...CAAAGAGCCCCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp CATGAACGGTCCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAAACCGAACGCTGCTCTaGGGCAGCCGCCGCCGGTTG +
Preference number: 4 (lower is better)
Translates to: HERSQPRPSALPTSAAPANRTLL*GSRRRL
Trigger: CAACCGGCGGCGGCTGCCGCAGAGCAGCGTTCGGTT...TGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGGACCGTTCATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp CCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGAACAAAACCGAACGCTaGTCTGCGGCAGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: PSRGPAPFQRPLPRQVPSNKTER*SAAAAA
Trigger: GGCGGCGGCTGCCGCAGAGCAGCGTTCGGTTTTGTT...CGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR CCA 90 bp CGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGGGCTCAACCGAGCTAGTGCGTaGCAGAGCGGTCCACGCCTG +
Preference number: 4 (lower is better)
Translates to: RGPAPFQRPLPRQVPSGLNRASA*QSGPRL
Trigger: CAGGCGTGGACCGCTCTGCCACGCACTAGCTCGGTT...GAGCCCCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CCA 90 bp GAACGGTCCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTGAGGGGCCGGGGCAGTaGTACAGACGGCTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: ERSQPRPSALPTSAAPAGEGPGQ*YRRLRN
Trigger: GTTCCTGAGCCGTCTGTACCACTGCCCCGGCCCCTC...ACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGGACCGTTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR TCA 90 bp CCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGGGCTCTTTGGCCGGTTGCTGCTACATaGACGGTCCCAGCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: PSALPTSAAPAGSLGALWPVAAT*TVPAEA
Trigger: GGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGG...CCAAAGAGCCCCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR TCA 90 bp CGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGGGCTCGCTACAGCTTGTGAGTaGCCCCCTTCCCCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: RGPAPFQRPLPRQVPSGLATACE*PPSPES
Trigger: GGACTCTGGGGAAGGGGGTCACTCACAAGCTGTAGC...GAGCCCCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR TCA 90 bp CCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGCTACAGCTTGTGAGTaGCCCCCTTCCCCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: PSRGPAPFQRPLPRQVPSATACE*PPSPES
Trigger: GGACTCTGGGGAAGGGGGTCACTCACAAGCTGTAGC...CGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR TCA 90 bp CCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGGGCAGCTACAGCTTGTaGGTGACCCCCTTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: PAEAQRPSNVRCPGRFPRGSYSL*VTPFPR
Trigger: TCTGGGGAAGGGGGTCACTCACAAGCTGTAGCTGCC...CCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp AGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCAGCGCCCTTCGCCCCCTCGATGCCTaGTGGCTAGCTCGCTCGCTC +
Preference number: 4 (lower is better)
Translates to: SRRRLLLHERSQPRPSALRPLDA*WLARSL
Trigger: GAGCGAGCGAGCTAGCCAGCAGGCATCGAGGGGGCG...AAGGGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp TCTGCGGCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCACGCCCCCTCGATGCCTaGTGGCTAGCTCGCTCGCTC +
Preference number: 4 (lower is better)
Translates to: SAAAAAGCCYMNGPSRGPRPLDA*WLARSL
Trigger: GAGCGAGCGAGCTAGCCAGCAGGCATCGAGGGGGCG...TGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp GTCCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTTGCGGCAGGCGCTGGTaGGCACTAGTACTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: VPAEAQRPSNVRCPGRFPCGRRW*ALVLGR
Trigger: CCTTCCCAGTACTAGTGCGCACCAGCGCCTGCCGCA...AGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp CGCTGCTCTGCGGCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGATCCACTTCGGTCCACTaGAGGCGTCCAGGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: RCSAAAAAGCCYMNGPSRSTSVH*RRPGPR
Trigger: GCGGGGCCCTGGACGCCTGCAGTGGACCGAAGTGGA...TCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGAGCAGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp CGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCAGCGCCCTTCCAGGGACACTAGGCAGCTaGTCCGGCGCCTCCTCGAGG +
Preference number: 4 (lower is better)
Translates to: RRRLLLHERSQPRPSALPGTLGS*SGASSR
Trigger: CCTCGAGGAGGCGCCGGAGCAGCTGCCTAGTGTCCC...TGGAAGGGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000633020.1
CDS-3UTR GCA 90 bp CGCTGCTCTGCGGCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGGACACTAGGCAGCTaGTCCGGCGCCTCCTCGAGG +
Preference number: 4 (lower is better)
Translates to: RCSAAAAAGCCYMNGPSRGTLGS*SGASSR
Trigger: CCTCGAGGAGGCGCCGGAGCAGCTGCCTAGTGTCCC...TCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGAGCAGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000633020.1
CDS-3UTR GCA 90 bp GGCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCAGCGCCCCCGAAATCCCCGAGTaGAGCTGGTCAGCGAGAGGC +
Preference number: 4 (lower is better)
Translates to: GSRRRLLLHERSQPRPSAPEIPE*SWSARG
Trigger: GCCTCTCGCTGACCAGCTGCACTCGGGGATTTCGGG...GGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000633020.1
CDS-3UTR GCA 90 bp GCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCAGCGCCCCCCGAAATCCCCGAGTaGAGCTGGTCAGCGAGAGGC +
Preference number: 4 (lower is better)
Translates to: AAAAGCCYMNGPSRGPAPPEIPE*SWSARG
Trigger: GCCTCTCGCTGACCAGCTGCACTCGGGGATTTCGGG...GGGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000633020.1
CDS-3UTR GCA 90 bp CTGCTCTGCGGCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGCTCACCGCAGCCTCTTaGGCGGGGTCTGCTCCACCG +
Preference number: 4 (lower is better)
Translates to: LLCGSRRRLLLHERSQPRLTAAS*AGSAPP
Trigger: CGGTGGAGCAGACCCCGCGCAAGAGGCTGCGGTGAG...CCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGAGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp CAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGGGCTCTTTGGGCGCAGCCGCCGCCGGTTaGTGCTACATGAACGGTCCC +
Preference number: 4 (lower is better)
Translates to: QRPSNVRCPGRFPRGSLGAAAAG*CYMNGP
Trigger: GGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGC...GCCCAAAGAGCCCCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp AACGGTCCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTGCAGCCGCCGCCGGTTaGTGCTACATGAACGGTCCC +
Preference number: 4 (lower is better)
Translates to: NGPSRGPAPFQRPLPRQVAAAAG*CYMNGP
Trigger: GGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGC...AACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGGACCGTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp TCCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCCCATCGTGGATGTGCTaGGGAGGGACGCGTCGGACA +
Preference number: 4 (lower is better)
Translates to: SQPRPSALPTSAAPAGSLPSWMC*GGTRRT
Trigger: TGTCCGACGCGTCCCTCCGCAGCACATCCACGATGG...GAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414822.8
ENST00000430149.3
ENST00000616138.2
ENST00000633020.1
CDS-3UTR CCA 90 bp CATGAACGGTCCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCACCCCTCGATGCCTGCTaGCTAGCTCGCTCGCTCAGG +
Preference number: 4 (lower is better)
Translates to: HERSQPRPSALPTSAAPAPLDAC*LARSLR
Trigger: CCTGAGCGAGCGAGCTAGCCAGCAGGCATCGAGGGG...TGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGGACCGTTCATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR CCA 90 bp CAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGGGCTCTTTGGGCCCCCTCGATGCCTGCTaGCTAGCTCGCTCGCTCAGG +
Preference number: 4 (lower is better)
Translates to: QRPSNVRCPGRFPRGSLGPLDAC*LARSLR
Trigger: CCTGAGCGAGCGAGCTAGCCAGCAGGCATCGAGGGG...GCCCAAAGAGCCCCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR CCA 90 bp CCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGGGCTCTGGCTGTCCGGTGGTaGACTCTTCTGCGTCGGGTT +
Preference number: 4 (lower is better)
Translates to: PRPSALPTSAAPAGSLGALAVRW*TLLRRV
Trigger: AACCCGACGCAGAAGAGTCCACCACCGGACAGCCAG...AGCCCCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR CCA 90 bp GAACGGTCCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTGTGCTGGCTGTCCGGTaGTGGACTCTTCTGCGTCGG +
Preference number: 4 (lower is better)
Translates to: ERSQPRPSALPTSAAPAGVLAVR*WTLLRR
Trigger: CCGACGCAGAAGAGTCCACCACCGGACAGCCAGCAC...ACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGGACCGTTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000440480.8
ENST00000631604.1
CDS-3UTR CCA 90 bp CAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGGGCTCTTTGGGCGGCTGCGGCAGGCGCTaGTGCGCACTAGTACTGGGA +
Preference number: 4 (lower is better)
Translates to: QRPSNVRCPGRFPRGSLGGCGRR*CALVLG
Trigger: TCCCAGTACTAGTGCGCACCAGCGCCTGCCGCAGCC...GCCCAAAGAGCCCCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR CCA 90 bp CTGCTCTGCGGCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGGACGCGGCGGCTACCTaGCTGTCCGGTGGTGGACTC +
Preference number: 4 (lower is better)
Translates to: LLCGSRRRLLLHERSQPRDAAAT*LSGGGL
Trigger: GAGTCCACCACCGGACAGCCAGGTAGCCGCCGCGTC...CCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGAGCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414822.8
ENST00000430149.3
ENST00000616138.2
ENST00000633020.1
CDS-3UTR TCA 90 bp CCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGCGACTTCTCAGGCGCTaGTCTCTTGCGCTTGGCGAA +
Preference number: 4 (lower is better)
Translates to: PAEAQRPSNVRCPGRFPRRLLRR*SLALGE
Trigger: TTCGCCAAGCGCAAGAGATCAGCGCCTGAGAAGTCG...CCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp TGCTACATGAACGGTCCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCTCCACTTCGGTCCACTaGAGGCGTCCAGGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: CYMNGPSRGPAPFQRPLPSTSVH*RRPGPR
Trigger: GCGGGGCCCTGGACGCCTGCAGTGGACCGAAGTGGA...GGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp GCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGGGCTCTTTGCCCGAAATCCCCGAGTaGAGCTGGTCAGCGAGAGGC +
Preference number: 4 (lower is better)
Translates to: AQRPSNVRCPGRFPRGSLPEIPE*SWSARG
Trigger: GCCTCTCGCTGACCAGCTGCACTCGGGGATTTCGGG...CAAAGAGCCCCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000633020.1
CDS-3UTR GCA 90 bp GAACGCTGCTCTGCGGCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCTCTTGCGCGGGGTCTaGTCCACCGAGCCCACGCCA +
Preference number: 4 (lower is better)
Translates to: ERCSAAAAAGCCYMNGPSLLRGV*STEPTP
Trigger: TGGCGTGGGCTCGGTGGAGCAGACCCCGCGCAAGAG...GCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGAGCAGCGTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp CTGCTACATGAACGGTCCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCTCTTGCGCGGGGTCTaGTCCACCGAGCCCACGCCA +
Preference number: 4 (lower is better)
Translates to: LLHERSQPRPSALPTSAALLRGV*STEPTP
Trigger: TGGCGTGGGCTCGGTGGAGCAGACCCCGCGCAAGAG...GGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp TCTGCGGCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCAGCCGCCGCCGGTTGCTaGTACATGAACGGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: SAAAAAGCCYMNGPSRGPAAAGC*YMNGPS
Trigger: GCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGC...TGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp CGCTGCTCTGCGGCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGCCGCCGCCGGTTGCTaGTACATGAACGGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: RCSAAAAAGCCYMNGPSRAAAGC*YMNGPS
Trigger: GCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGC...TCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGAGCAGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp CGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCAGCGCCCTTCCAGCCGCCGCCGGTTGCTaGTACATGAACGGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: RRRLLLHERSQPRPSALPAAAGC*YMNGPS
Trigger: GCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGC...TGGAAGGGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp TCTGCGGCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCAGCAGCCGCCGCCGGTTaGTGCTACATGAACGGTCCC +
Preference number: 4 (lower is better)
Translates to: SAAAAAGCCYMNGPSRGPAAAAG*CYMNGP
Trigger: GGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGC...TGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp GAACGCTGCTCTGCGGCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCAACCGAACGCTGCTCTaGGGCAGCCGCCGCCGGTTG +
Preference number: 4 (lower is better)
Translates to: ERCSAAAAAGCCYMNGPSNRTLL*GSRRRL
Trigger: CAACCGGCGGCGGCTGCCGCAGAGCAGCGTTCGGTT...GCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGAGCAGCGTTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp GCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCAGCGCCCTTCCAACGTGCCCGACTCTGCGTGTaGGAGGGACGCGGCGGCTAC +
Preference number: 4 (lower is better)
Translates to: AGCCYMNGPSRGPAPFQRARLCV*EGRGGY
Trigger: GTAGCCGCCGCGTCCCTCGCACACGCAGAGTCGGGC...ACGTTGGAAGGGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414822.8
ENST00000430149.3
ENST00000616138.2
ENST00000633020.1
CDS-3UTR GCA 90 bp GCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCAGCGCCCTTCCCATCGTGGATGTGCTaGGGAGGGACGCGTCGGACA +
Preference number: 4 (lower is better)
Translates to: AAAGCCYMNGPSRGPAPFPSWMC*GGTRRT
Trigger: TGTCCGACGCGTCCCTCCGCAGCACATCCACGATGG...GAAGGGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414822.8
ENST00000430149.3
ENST00000616138.2
ENST00000633020.1
CDS-3UTR GCA 90 bp CCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGGGCTCTTTGGCCATCGTGGATGTGCTaGGGAGGGACGCGTCGGACA +
Preference number: 4 (lower is better)
Translates to: PSALPTSAAPAGSLGALWPSWMC*GGTRRT
Trigger: TGTCCGACGCGTCCCTCCGCAGCACATCCACGATGG...CCAAAGAGCCCCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414822.8
ENST00000430149.3
ENST00000616138.2
ENST00000633020.1
CDS-3UTR GCA 90 bp CTGCTCTGCGGCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGGCTCCATCGTGGATGTaGTGCGGAGGGACGCGTCGG +
Preference number: 4 (lower is better)
Translates to: LLCGSRRRLLLHERSQPRAPSWM*CGGTRR
Trigger: CCGACGCGTCCCTCCGCAGCACATCCACGATGGAGC...CCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGAGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414822.8
ENST00000430149.3
ENST00000616138.2
ENST00000633020.1
CDS-3UTR CCA 90 bp CGCTGCTCTGCGGCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGACCCCTCGATGCCTGCTaGCTAGCTCGCTCGCTCAGG +
Preference number: 4 (lower is better)
Translates to: RCSAAAAAGCCYMNGPSRPLDAC*LARSLR
Trigger: CCTGAGCGAGCGAGCTAGCCAGCAGGCATCGAGGGG...TCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGAGCAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR CCA 90 bp CGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCAGCGCCCTTCCAGGCTGCGGCAGGCGCTaGTGCGCACTAGTACTGGGA +
Preference number: 4 (lower is better)
Translates to: RRRLLLHERSQPRPSALPGCGRR*CALVLG
Trigger: TCCCAGTACTAGTGCGCACCAGCGCCTGCCGCAGCC...TGGAAGGGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR CCA 90 bp CCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGGGCTCTTTGGAACCGAGCTAGTGCGTaGCAGAGCGGTCCACGCCTG +
Preference number: 4 (lower is better)
Translates to: PSALPTSAAPAGSLGALWNRASA*QSGPRL
Trigger: CAGGCGTGGACCGCTCTGCCACGCACTAGCTCGGTT...CCAAAGAGCCCCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CCA 90 bp TCTGCGGCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCAGAGGGGCCGGGGCAGTaGTACAGACGGCTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: SAAAAAGCCYMNGPSRGPEGPGQ*YRRLRN
Trigger: GTTCCTGAGCCGTCTGTACCACTGCCCCGGCCCCTC...TGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CCA 90 bp GAACGGTCCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTACCTGGCTGTCCGGTaGTGGACTCTTCTGCGTCGG +
Preference number: 4 (lower is better)
Translates to: ERSQPRPSALPTSAAPAGYLAVR*WTLLRR
Trigger: CCGACGCAGAAGAGTCCACCACCGGACAGCCAGGTA...ACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGGACCGTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414822.8
ENST00000430149.3
ENST00000616138.2
ENST00000633020.1
CDS-3UTR CCA 90 bp TGCTACATGAACGGTCCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCGACGCGGCGGCTACCTaGCTGTCCGGTGGTGGACTC +
Preference number: 4 (lower is better)
Translates to: CYMNGPSRGPAPFQRPLPDAAAT*LSGGGL
Trigger: GAGTCCACCACCGGACAGCCAGGTAGCCGCCGCGTC...GGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414822.8
ENST00000430149.3
ENST00000616138.2
ENST00000633020.1
CDS-3UTR CCA 90 bp CTGCTACATGAACGGTCCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCGACGCGGCGGCTACCTaGCTGTCCGGTGGTGGACTC +
Preference number: 4 (lower is better)
Translates to: LLHERSQPRPSALPTSAADAAAT*LSGGGL
Trigger: GAGTCCACCACCGGACAGCCAGGTAGCCGCCGCGTC...GGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414822.8
ENST00000430149.3
ENST00000616138.2
ENST00000633020.1
CDS-3UTR CCA 90 bp GAACGGTCCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTCAAGACGCTCCATCGTaGATGTGCTGCGGAGGGACG +
Preference number: 4 (lower is better)
Translates to: ERSQPRPSALPTSAAPAGQDAPS*MCCGGT
Trigger: CGTCCCTCCGCAGCACATCCACGATGGAGCGTCTTG...ACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGGACCGTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414822.8
ENST00000430149.3
ENST00000616138.2
ENST00000633020.1
CDS-3UTR TCA 90 bp AACGGTCCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTGCTACAGCTTGTGAGTaGCCCCCTTCCCCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: NGPSRGPAPFQRPLPRQVATACE*PPSPES
Trigger: GGACTCTGGGGAAGGGGGTCACTCACAAGCTGTAGC...AACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGGACCGTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp CCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGGGCTCTTTGGGGTGGTGGACTCTTCTaGGTCGGGTTCGCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: PSALPTSAAPAGSLGALWGGGLF*VGFACL
Trigger: GAGACAGGCGAACCCGACGCAGAAGAGTCCACCACC...CCAAAGAGCCCCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp GCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCTTCCAACGTCCGCTaGCCCGGCAGGTTCCCTCGG +
Preference number: 4 (lower is better)
Translates to: AGCCYMNGPSRGPAPFQRPSNVR*PGRFPR
Trigger: CCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGG...ACGTTGGAAGGGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp GAACGCTGCTCTGCGGCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCGCCGCCGCCGGTTGCTaGTACATGAACGGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: ERCSAAAAAGCCYMNGPSAAAGC*YMNGPS
Trigger: GCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGC...GCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGAGCAGCGTTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp AACCGAACGCTGCTCTGCGGCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCAACCGAACGCTGCTCTaGGGCAGCCGCCGCCGGTTG +
Preference number: 4 (lower is better)
Translates to: NRTLLCGSRRRLLLHERSNRTLL*GSRRRL
Trigger: CAACCGGCGGCGGCTGCCGCAGAGCAGCGTTCGGTT...GGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGAGCAGCGTTCGGTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp TCTGCGGCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCAAACAAAACCGAACGCTaGTCTGCGGCAGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: SAAAAAGCCYMNGPSRGPNKTER*SAAAAA
Trigger: GGCGGCGGCTGCCGCAGAGCAGCGTTCGGTTTTGTT...TGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp AGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCAGCGCCCTTAACAAAACCGAACGCTaGTCTGCGGCAGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: SRRRLLLHERSQPRPSALNKTER*SAAAAA
Trigger: GGCGGCGGCTGCCGCAGAGCAGCGTTCGGTTTTGTT...AAGGGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp CGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCAGCGCCCTTCCAAACAAAACCGAACGCTaGTCTGCGGCAGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: RRRLLLHERSQPRPSALPNKTER*SAAAAA
Trigger: GGCGGCGGCTGCCGCAGAGCAGCGTTCGGTTTTGTT...TGGAAGGGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR CCA 90 bp GCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCAGCGCCCTTCCTGGCTGTCCGGTGGTaGACTCTTCTGCGTCGGGTT +
Preference number: 4 (lower is better)
Translates to: AAAGCCYMNGPSRGPAPFLAVRW*TLLRRV
Trigger: AACCCGACGCAGAAGAGTCCACCACCGGACAGCCAG...GAAGGGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR CCA 90 bp CAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGGGCTCTTTGGGCCTGGCTGTCCGGTGGTaGACTCTTCTGCGTCGGGTT +
Preference number: 4 (lower is better)
Translates to: QRPSNVRCPGRFPRGSLGLAVRW*TLLRRV
Trigger: AACCCGACGCAGAAGAGTCCACCACCGGACAGCCAG...GCCCAAAGAGCCCCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR CCA 90 bp CTGCTACATGAACGGTCCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCGGCTGCGGCAGGCGCTaGTGCGCACTAGTACTGGGA +
Preference number: 4 (lower is better)
Translates to: LLHERSQPRPSALPTSAAGCGRR*CALVLG
Trigger: TCCCAGTACTAGTGCGCACCAGCGCCTGCCGCAGCC...GGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR CCA 90 bp CCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGGGCTCTTTGGGCTTTGGGGCTGCGGCAGGCGCTaGTGCGCACTAGTACTGGGA +
Preference number: 4 (lower is better)
Translates to: PFQRPLPRQVPSGLFGLWGCGRR*CALVLG
Trigger: TCCCAGTACTAGTGCGCACCAGCGCCTGCCGCAGCC...CCAAAGCCCAAAGAGCCCCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000414822.8
ENST00000633020.1
CDS-3UTR CCA 90 bp AGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCAGCGCCCTTAACCGAGCTAGTGCGTaGCAGAGCGGTCCACGCCTG +
Preference number: 4 (lower is better)
Translates to: SRRRLLLHERSQPRPSALNRASA*QSGPRL
Trigger: CAGGCGTGGACCGCTCTGCCACGCACTAGCTCGGTT...AAGGGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CCA 90 bp CTGCTCTGCGGCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGAACCGAGCTAGTGCGTaGCAGAGCGGTCCACGCCTG +
Preference number: 4 (lower is better)
Translates to: LLCGSRRRLLLHERSQPRNRASA*QSGPRL
Trigger: CAGGCGTGGACCGCTCTGCCACGCACTAGCTCGGTT...CCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGAGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
3UTR CAA 72 bp CAAAACCGAACGCTGCTCTGCGGCAGCCGCCGCCGGTaGCTGCTACATGAACGGTCCCAGCCGAGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: QNRTLLCGSRRR*LLHERSQPRPS
Trigger: GCTGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGAGCAGCGTTCGGTTTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR TCA 90 bp GGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCCGGTTGCTGCTACATaGACGGTCCCAGCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: GCCYMNGPSRGPAPFQRPPVAAT*TVPAEA
Trigger: GGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGG...CGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp TGCTACATGAACGGTCCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCTGCGGCAGGCGCTGGTaGGCACTAGTACTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: CYMNGPSRGPAPFQRPLPCGRRW*ALVLGR
Trigger: CCTTCCCAGTACTAGTGCGCACCAGCGCCTGCCGCA...GGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp GAACGGTCCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTCAGGCGCTGATCTCTTaGGCTTGGCGAAGAAATCGG +
Preference number: 4 (lower is better)
Translates to: ERSQPRPSALPTSAAPAGQALIS*AWRRNR
Trigger: CCGATTTCTTCGCCAAGCGCAAGAGATCAGCGCCTG...ACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGGACCGTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000633020.1
CDS-3UTR GCA 90 bp GCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCAGCGCCCTTCCAACGTGCCGCCGCCGGTTGCTaGTACATGAACGGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: AGCCYMNGPSRGPAPFQRAAAGC*YMNGPS
Trigger: GCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGC...ACGTTGGAAGGGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp AACCGAACGCTGCTCTGCGGCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCGCAGCCGCCGCCGGTTaGTGCTACATGAACGGTCCC +
Preference number: 4 (lower is better)
Translates to: NRTLLCGSRRRLLLHERSAAAAG*CYMNGP
Trigger: GGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGC...GGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGAGCAGCGTTCGGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp GGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGGCTCCATCGTGGATGTaGTGCGGAGGGACGCGTCGG +
Preference number: 4 (lower is better)
Translates to: GCCYMNGPSRGPAPFQRPAPSWM*CGGTRR
Trigger: CCGACGCGTCCCTCCGCAGCACATCCACGATGGAGC...CGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414822.8
ENST00000430149.3
ENST00000616138.2
ENST00000633020.1
CDS-3UTR CCA 90 bp GGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCCCCTCGATGCCTGCTaGCTAGCTCGCTCGCTCAGG +
Preference number: 4 (lower is better)
Translates to: GCCYMNGPSRGPAPFQRPPLDAC*LARSLR
Trigger: CCTGAGCGAGCGAGCTAGCCAGCAGGCATCGAGGGG...CGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR CCA 90 bp CGCTGCTCTGCGGCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGACTGGCTGTCCGGTGGTaGACTCTTCTGCGTCGGGTT +
Preference number: 4 (lower is better)
Translates to: RCSAAAAAGCCYMNGPSRLAVRW*TLLRRV
Trigger: AACCCGACGCAGAAGAGTCCACCACCGGACAGCCAG...TCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGAGCAGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR CCA 90 bp AGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCAGCGCCCTTCCATCGTGGATGTGCTaGCTGTCCGGTGGTGGACTC +
Preference number: 4 (lower is better)
Translates to: SRRRLLLHERSQPRPSALPSWMC*LSGGGL
Trigger: GAGTCCACCACCGGACAGCCAGCACATCCACGATGG...AAGGGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000440480.8
ENST00000631604.1
CDS-3UTR CCA 90 bp CTCTGCGGCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCCAAGACGCTCCATCGTaGATGTGCTGGCTGTCCGGT +
Preference number: 4 (lower is better)
Translates to: LCGSRRRLLLHERSQPRPQDAPS*MCWLSG
Trigger: ACCGGACAGCCAGCACATCCACGATGGAGCGTCTTG...GGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000440480.8
ENST00000631604.1
CDS-3UTR CCA 90 bp CCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGGGCTCTTTGGGCTCTAAATTaGCTCACCGCAGCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: PRPSALPTSAAPAGSLGALWALN*LTAASC
Trigger: GCAAGAGGCTGCGGTGAGCCAATTTAGAGCCCAAAG...AGCCCCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR TCA 90 bp CTGCTACATGAACGGTCCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCGCTACAGCTTGTGAGTaGCCCCCTTCCCCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: LLHERSQPRPSALPTSAAATACE*PPSPES
Trigger: GGACTCTGGGGAAGGGGGTCACTCACAAGCTGTAGC...GGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp AACAAAACCGAACGCTGCTCTGCGGCAGCCGCCGCCGGTTGCTGCTACATGAACGCCGCGCCCCCTCGATaGCTGCTGGCTAGCTCGCTC +
Preference number: 4 (lower is better)
Translates to: NKTERCSAAAAAGCCYMNAAPPR*LLASSL
Trigger: GAGCGAGCTAGCCAGCAGGCATCGAGGGGGCGCGGC...GTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGAGCAGCGTTCGGTTTTGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp GCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGGGCTCTTTGCAGGCGCTGATCTCTTaGGCTTGGCGAAGAAATCGG +
Preference number: 4 (lower is better)
Translates to: AQRPSNVRCPGRFPRGSLQALIS*AWRRNR
Trigger: CCGATTTCTTCGCCAAGCGCAAGAGATCAGCGCCTG...CAAAGAGCCCCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000633020.1
CDS-3UTR GCA 90 bp AACCGAACGCTGCTCTGCGGCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCAACAAAACCGAACGCTaGTCTGCGGCAGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: NRTLLCGSRRRLLLHERSNKTER*SAAAAA
Trigger: GGCGGCGGCTGCCGCAGAGCAGCGTTCGGTTTTGTT...GGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGAGCAGCGTTCGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp AACAAAACCGAACGCTGCTCTGCGGCAGCCGCCGCCGGTTGCTGCTACATGAACGACATGGCCCGGGGCTaGGCAAACGCGGGCAGCGAG +
Preference number: 4 (lower is better)
Translates to: NKTERCSAAAAAGCCYMNDMARG*ANAGSE
Trigger: CTCGCTGCCCGCGTTTGCGCAGCCCCGGGCCATGTC...GTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGAGCAGCGTTCGGTTTTGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414822.8
ENST00000430149.3
ENST00000616138.2
ENST00000633020.1
CDS-3UTR GCA 90 bp GGGCATGTATGGCAGCTACAGCTTGTGAGTGACCCCCTTCCCCAGAGTCCGCGAGACATGGCCCGGGGCTaGGCAAACGCGGGCAGCGAG +
Preference number: 4 (lower is better)
Translates to: GHVWQLQLVSDPLPQSPRDMARG*ANAGSE
Trigger: CTCGCTGCCCGCGTTTGCGCAGCCCCGGGCCATGTC...TCGCGGACTCTGGGGAAGGGGGTCACTCACAAGCTGTAGCTGCCATACATGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414822.8
ENST00000430149.3
ENST00000616138.2
CDS-3UTR CCA 90 bp GAACGCTGCTCTGCGGCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCTGGCTGTCCGGTGGTaGACTCTTCTGCGTCGGGTT +
Preference number: 4 (lower is better)
Translates to: ERCSAAAAAGCCYMNGPSLAVRW*TLLRRV
Trigger: AACCCGACGCAGAAGAGTCCACCACCGGACAGCCAG...GCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGAGCAGCGTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR CCA 90 bp CTGCTACATGAACGGTCCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCATCGTGGATGTGCTaGCTGTCCGGTGGTGGACTC +
Preference number: 4 (lower is better)
Translates to: LLHERSQPRPSALPTSAAPSWMC*LSGGGL
Trigger: GAGTCCACCACCGGACAGCCAGCACATCCACGATGG...GGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000440480.8
ENST00000631604.1
CDS-3UTR CCA 90 bp GTCCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCTTTGGGCTCTAAATTaGCTCACCGCAGCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: VPAEAQRPSNVRCPGRFPLWALN*LTAASC
Trigger: GCAAGAGGCTGCGGTGAGCCAATTTAGAGCCCAAAG...AGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CCA 90 bp CCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGGGCTCTGATCTCTTGCGCTTaGCGAAGAAATCTGCACCGT +
Preference number: 4 (lower is better)
Translates to: PRPSALPTSAAPAGSLGALISCA*RRNLHR
Trigger: ACGGTGCAGATTTCTTCGCCAAGCGCAAGAGATCAG...AGCCCCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380725.2
ENST00000631604.1
CDS-3UTR CCA 90 bp CGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGGGCTCCTGATCTCTTGCGCTTaGCGAAGAAATCTGCACCGT +
Preference number: 4 (lower is better)
Translates to: RGPAPFQRPLPRQVPSGLLISCA*RRNLHR
Trigger: ACGGTGCAGATTTCTTCGCCAAGCGCAAGAGATCAG...GAGCCCCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380725.2
ENST00000631604.1
CDS-3UTR CCA 90 bp CCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGGGCTCTTTGGGCTTTGGTACCTGGCTGTCCGGTaGTGGACTCTTCTGCGTCGG +
Preference number: 4 (lower is better)
Translates to: PFQRPLPRQVPSGLFGLWYLAVR*WTLLRR
Trigger: CCGACGCAGAAGAGTCCACCACCGGACAGCCAGGTA...CCAAAGCCCAAAGAGCCCCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414822.8
ENST00000633020.1
CDS-3UTR CCA 90 bp TGCTACATGAACGGTCCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCGGGCTCTTTGGGCTTTaGCTCACCGCAGCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: CYMNGPSRGPAPFQRPLPGLFGL*LTAASC
Trigger: GCAAGAGGCTGCGGTGAGCCAAAGCCCAAAGAGCCC...GGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414822.8
ENST00000633020.1
CDS-3UTR TCA 90 bp AACCGAACGCTGCTCTGCGGCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCGGCAGCTACAGCTTGTaGGTGACCCCCTTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: NRTLLCGSRRRLLLHERSGSYSL*VTPFPR
Trigger: TCTGGGGAAGGGGGTCACTCACAAGCTGTAGCTGCC...GGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGAGCAGCGTTCGGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR TCA 90 bp GGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGGGCAGCTACAGCTTGTaGGTGACCCCCTTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: GCCYMNGPSRGPAPFQRPGSYSL*VTPFPR
Trigger: TCTGGGGAAGGGGGTCACTCACAAGCTGTAGCTGCC...CGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp GGCATAACCAATAACCGAGCTAGTGCGTGGCAGAGCGGTCCACGCCTGGACATATCGGCCAGGCGGGCCTaGAGCTCGCGGCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GITNNRASAWQSGPRLDISARRA*SSRLSS
Trigger: GGAGCTGAGCCGCGAGCTGCAGGCCCGCCTGGCCGA...TATGTCCAGGCGTGGACCGCTCTGCCACGCACTAGCTCGGTTATTGGTTATGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp GGGCATGTATGGCAGCTACAGCTTGTGAGTGACCCCCTTCCCCAGAGTCCGCGAGGGACACTAGGCAGCTaGTCCGGCGCCTCCTCGAGG +
Preference number: 4 (lower is better)
Translates to: GHVWQLQLVSDPLPQSPRGTLGS*SGASSR
Trigger: CCTCGAGGAGGCGCCGGAGCAGCTGCCTAGTGTCCC...TCGCGGACTCTGGGGAAGGGGGTCACTCACAAGCTGTAGCTGCCATACATGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
CDS-3UTR GCA 90 bp GGGCATGTATGGCAGCTACAGCTTGTGAGTGACCCCCTTCCCCAGAGTCCGCGACTCACCGCAGCCTCTTaGGCGGGGTCTGCTCCACCG +
Preference number: 4 (lower is better)
Translates to: GHVWQLQLVSDPLPQSPRLTAAS*AGSAPP
Trigger: CGGTGGAGCAGACCCCGCGCAAGAGGCTGCGGTGAG...TCGCGGACTCTGGGGAAGGGGGTCACTCACAAGCTGTAGCTGCCATACATGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp CCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGAAAGCGCGAAGAGACTaGAAGCTAGATGGGCATGTA +
Preference number: 4 (lower is better)
Translates to: PAEAQRPSNVRCPGRFPRKARRD*KLDGHV
Trigger: TACATGCCCATCTAGCTTGCAGTCTCTTCGCGCTTT...CCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp CCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGGGCTAAAGCGCGAAGAGACTaGAAGCTAGATGGGCATGTA +
Preference number: 4 (lower is better)
Translates to: PRPSALPTSAAPAGSLGAKARRD*KLDGHV
Trigger: TACATGCCCATCTAGCTTGCAGTCTCTTCGCGCTTT...AGCCCCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp AGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGGGAAAGCGCGAAGAGACTaGAAGCTAGATGGGCATGTA +
Preference number: 4 (lower is better)
Translates to: SRGPAPFQRPLPRQVPSGKARRD*KLDGHV
Trigger: TACATGCCCATCTAGCTTGCAGTCTCTTCGCGCTTT...CCCCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CCA 90 bp CTGCTACATGAACGGTCCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCAAGACGCTCCATCGTaGATGTGCTGGCTGTCCGGT +
Preference number: 4 (lower is better)
Translates to: LLHERSQPRPSALPTSAAQDAPS*MCWLSG
Trigger: ACCGGACAGCCAGCACATCCACGATGGAGCGTCTTG...GGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000440480.8
ENST00000631604.1
CDS-3UTR CCA 90 bp AACAAAACCGAACGCTGCTCTGCGGCAGCCGCCGCCGGTTGCTGCTACATGAACCGGCTCAGCTCCTCGTaGTCCACCGGCCCGAAGAGG +
Preference number: 4 (lower is better)
Translates to: NKTERCSAAAAAGCCYMNRLSSS*STGPKR
Trigger: CCTCTTCGGGCCGGTGGACCACGAGGAGCTGAGCCG...GTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGAGCAGCGTTCGGTTTTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR CCA 90 bp CTGCTCTGCGGCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGTCCCTCGGGGCTCTTTaGGCTCTAAATTGGCTCACC +
Preference number: 4 (lower is better)
Translates to: LLCGSRRRLLLHERSQPRSLGAL*ALNWLT
Trigger: GGTGAGCCAATTTAGAGCCCAAAGAGCCCCGAGGGA...CCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR TCA 90 bp AACCGAACGCTGCTCTGCGGCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCGACTTCTCAGGCGCTaGTCTCTTGCGCTTGGCGAA +
Preference number: 4 (lower is better)
Translates to: NRTLLCGSRRRLLLHERSRLLRR*SLALGE
Trigger: TTCGCCAAGCGCAAGAGATCAGCGCCTGAGAAGTCG...GGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGAGCAGCGTTCGGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR TCA 90 bp GGGCATGTATGGCAGCTACAGCTTGTGAGTGACCCCCTTCCCCAGAGTCCGCGACCGGTTGCTGCTACATaGACGGTCCCAGCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: GHVWQLQLVSDPLPQSPRPVAAT*TVPAEA
Trigger: GGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGG...TCGCGGACTCTGGGGAAGGGGGTCACTCACAAGCTGTAGCTGCCATACATGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp GCCTTTGGCATAACCAATAACCGAGCTAGTGCGTGGCAGAGCGGTCCACGCCTGTCCACTTCGGTCCACTaGAGGCGTCCAGGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: AFGITNNRASAWQSGPRLSTSVH*RRPGPR
Trigger: GCGGGGCCCTGGACGCCTGCAGTGGACCGAAGTGGA...CAGGCGTGGACCGCTCTGCCACGCACTAGCTCGGTTATTGGTTATGCCAAAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp GAACGCTGCTCTGCGGCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCAGGCGCTGATCTCTTaGGCTTGGCGAAGAAATCGG +
Preference number: 4 (lower is better)
Translates to: ERCSAAAAAGCCYMNGPSQALIS*AWRRNR
Trigger: CCGATTTCTTCGCCAAGCGCAAGAGATCAGCGCCTG...GCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGAGCAGCGTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000633020.1
CDS-3UTR CCA 90 bp GAACGGTCCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTCTGATCTCTTGCGCTTaGCGAAGAAATCGGAGATCA +
Preference number: 4 (lower is better)
Translates to: ERSQPRPSALPTSAAPAGLISCA*RRNRRS
Trigger: TGATCTCCGATTTCTTCGCCAAGCGCAAGAGATCAG...ACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGGACCGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000633020.1
CDS-3UTR CCA 90 bp GGCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCAGCGCCAGACTGCAAGCTAGATaGGCATGTATGGCAGCTACA +
Preference number: 4 (lower is better)
Translates to: GSRRRLLLHERSQPRPSARLQAR*ACMAAT
Trigger: TGTAGCTGCCATACATGCCCATCTAGCTTGCAGTCT...GGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CCA 90 bp GGGCATGTATGGCAGCTACAGCTTGTGAGTGACCCCCTTCCCCAGAGTCCGCGAGAGGGGCCGGGGCAGTaGTACAGACGGCTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: GHVWQLQLVSDPLPQSPREGPGQ*YRRLRN
Trigger: GTTCCTGAGCCGTCTGTACCACTGCCCCGGCCCCTC...TCGCGGACTCTGGGGAAGGGGGTCACTCACAAGCTGTAGCTGCCATACATGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CCA 90 bp GAGTTGCAGCATTTTTCGGCCTCTTTATTTAGAACCCGGCGGACGAGGGGCCGGGGGACGCGTCGGACATaGCCCGGGGCTGCGCAAACG +
Preference number: 4 (lower is better)
Translates to: ELQHFSASLFRTRRTRGRGTRRT*PGAAQT
Trigger: CGTTTGCGCAGCCCCGGGCCATGTCCGACGCGTCCC...CCGGCCCCTCGTCCGCCGGGTTCTAAATAAAGAGGCCGAAAAATGCTGCAACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000414822.8
ENST00000616138.2
CDS-3UTR GCA 90 bp ACAGCGAAAGCGCGAAGAGACTGCAAGCTAGATGGGCATGTATGGCAGCTACAGCCGGCCCGAAGAGGCTaGGGCAGGCGCTGGTGCGCA +
Preference number: 4 (lower is better)
Translates to: TAKARRDCKLDGHVWQLQPARRG*GRRWCA
Trigger: TGCGCACCAGCGCCTGCCGCAGCCTCTTCGGGCCGG...CTGTAGCTGCCATACATGCCCATCTAGCTTGCAGTCTCTTCGCGCTTTCGCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp AGCGCGAAGAGACTGCAAGCTAGATGGGCATGTATGGCAGCTACAGCTTGTGAGCCGGCCCGAAGAGGCTaGGGCAGGCGCTGGTGCGCA +
Preference number: 4 (lower is better)
Translates to: SAKRLQARWACMAATACEPARRG*GRRWCA
Trigger: TGCGCACCAGCGCCTGCCGCAGCCTCTTCGGGCCGG...CTCACAAGCTGTAGCTGCCATACATGCCCATCTAGCTTGCAGTCTCTTCGCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp TGGGAGATGGAGAGTGCCTTTGGCATAACCAATAACCGAGCTAGTGCGTGGCAGTCGGCCAGGCGGGCCTaGAGCTCGCGGCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: WEMESAFGITNNRASAWQSARRA*SSRLSS
Trigger: GGAGCTGAGCCGCGAGCTGCAGGCCCGCCTGGCCGA...CTGCCACGCACTAGCTCGGTTATTGGTTATGCCAAAGGCACTCTCCATCTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp GAGATGGAGAGTGCCTTTGGCATAACCAATAACCGAGCTAGTGCGTGGCAGAGCTCGGCCAGGCGGGCCTaGAGCTCGCGGCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: EMESAFGITNNRASAWQSSARRA*SSRLSS
Trigger: GGAGCTGAGCCGCGAGCTGCAGGCCCGCCTGGCCGA...GCTCTGCCACGCACTAGCTCGGTTATTGGTTATGCCAAAGGCACTCTCCATCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp TTTGGCATAACCAATAACCGAGCTAGTGCGTGGCAGAGCGGTCCACGCCTGGACCTCTTGCGCGGGGTCTaGTCCACCGAGCCCACGCCA +
Preference number: 4 (lower is better)
Translates to: FGITNNRASAWQSGPRLDLLRGV*STEPTP
Trigger: TGGCGTGGGCTCGGTGGAGCAGACCCCGCGCAAGAG...GTCCAGGCGTGGACCGCTCTGCCACGCACTAGCTCGGTTATTGGTTATGCCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp GCCTTTGGCATAACCAATAACCGAGCTAGTGCGTGGCAGAGCGGTCCACGCCTGGCCGCCGCCGGTTGCTaGTACATGAACGGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: AFGITNNRASAWQSGPRLAAAGC*YMNGPS
Trigger: GCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGC...CAGGCGTGGACCGCTCTGCCACGCACTAGCTCGGTTATTGGTTATGCCAAAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp CAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGGGCTCTTTGGGCAAAGCGCGAAGAGACTaGAAGCTAGATGGGCATGTA +
Preference number: 4 (lower is better)
Translates to: QRPSNVRCPGRFPRGSLGKARRD*KLDGHV
Trigger: TACATGCCCATCTAGCTTGCAGTCTCTTCGCGCTTT...GCCCAAAGAGCCCCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CCA 90 bp GCCTTTGGCATAACCAATAACCGAGCTAGTGCGTGGCAGAGCGGTCCACGCCTGGGCTGCGGCAGGCGCTaGTGCGCACTAGTACTGGGA +
Preference number: 4 (lower is better)
Translates to: AFGITNNRASAWQSGPRLGCGRR*CALVLG
Trigger: TCCCAGTACTAGTGCGCACCAGCGCCTGCCGCAGCC...CAGGCGTGGACCGCTCTGCCACGCACTAGCTCGGTTATTGGTTATGCCAAAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CCA 90 bp GGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGTCCCTCGGGGCTCTTTaGGCTCTAAATTGGCTCACC +
Preference number: 4 (lower is better)
Translates to: GCCYMNGPSRGPAPFQRPSLGAL*ALNWLT
Trigger: GGTGAGCCAATTTAGAGCCCAAAGAGCCCCGAGGGA...CGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CCA 90 bp AACCGAACGCTGCTCTGCGGCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCTCCCTCGGGGCTCTTTaGGCTCTAAATTGGCTCACC +
Preference number: 4 (lower is better)
Translates to: NRTLLCGSRRRLLLHERSSLGAL*ALNWLT
Trigger: GGTGAGCCAATTTAGAGCCCAAAGAGCCCCGAGGGA...GGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGAGCAGCGTTCGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CCA 90 bp AACAAAACCGAACGCTGCTCTGCGGCAGCCGCCGCCGGTTGCTGCTACATGAACAACCGAGCTAGTGCGTaGCAGAGCGGTCCACGCCTG +
Preference number: 4 (lower is better)
Translates to: NKTERCSAAAAAGCCYMNNRASA*QSGPRL
Trigger: CAGGCGTGGACCGCTCTGCCACGCACTAGCTCGGTT...GTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGAGCAGCGTTCGGTTTTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CCA 90 bp GGCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCAGCGCCGTCAATAACCAGATGTaGGAGATGGAGAGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: GSRRRLLLHERSQPRPSAVNNQM*EMESAF
Trigger: AAAGGCACTCTCCATCTCCCACATCTGGTTATTGAC...GGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CCA 90 bp TTTGGCATAACCAATAACCGAGCTAGTGCGTGGCAGAGCGGTCCACGCCTGGACGACGCGGCGGCTACCTaGCTGTCCGGTGGTGGACTC +
Preference number: 4 (lower is better)
Translates to: FGITNNRASAWQSGPRLDDAAAT*LSGGGL
Trigger: GAGTCCACCACCGGACAGCCAGGTAGCCGCCGCGTC...GTCCAGGCGTGGACCGCTCTGCCACGCACTAGCTCGGTTATTGGTTATGCCAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414822.8
ENST00000430149.3
ENST00000616138.2
CDS-3UTR CCA 90 bp GGGCCGGGGCAGTGGTACAGACGGCTCAGGAACCATTTTAACAGACTTGTCTTCGGGACGCGTCGGACATaGCCCGGGGCTGCGCAAACG +
Preference number: 4 (lower is better)
Translates to: GPGQWYRRLRNHFNRLVFGTRRT*PGAAQT
Trigger: CGTTTGCGCAGCCCCGGGCCATGTCCGACGCGTCCC...GAAGACAAGTCTGTTAAAATGGTTCCTGAGCCGTCTGTACCACTGCCCCGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000414822.8
ENST00000430149.3
ENST00000616138.2
CDS-3UTR CCA 90 bp AAGCTAGATGGGCATGTATGGCAGCTACAGCTTGTGAGTGACCCCCTTCCCCAGGGGACGCGTCGGACATaGCCCGGGGCTGCGCAAACG +
Preference number: 4 (lower is better)
Translates to: KLDGHVWQLQLVSDPLPQGTRRT*PGAAQT
Trigger: CGTTTGCGCAGCCCCGGGCCATGTCCGACGCGTCCC...CTGGGGAAGGGGGTCACTCACAAGCTGTAGCTGCCATACATGCCCATCTAGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000414822.8
ENST00000430149.3
ENST00000616138.2
CDS-3UTR GCA 90 bp TGGGAGATGGAGAGTGCCTTTGGCATAACCAATAACCGAGCTAGTGCGTGGCAGGCCGCGCCCCCTCGATaGCTGCTGGCTAGCTCGCTC +
Preference number: 4 (lower is better)
Translates to: WEMESAFGITNNRASAWQAAPPR*LLASSL
Trigger: GAGCGAGCTAGCCAGCAGGCATCGAGGGGGCGCGGC...CTGCCACGCACTAGCTCGGTTATTGGTTATGCCAAAGGCACTCTCCATCTCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp AGCGCGAAGAGACTGCAAGCTAGATGGGCATGTATGGCAGCTACAGCTTGTGAGGCCGCGCCCCCTCGATaGCTGCTGGCTAGCTCGCTC +
Preference number: 4 (lower is better)
Translates to: SAKRLQARWACMAATACEAAPPR*LLASSL
Trigger: GAGCGAGCTAGCCAGCAGGCATCGAGGGGGCGCGGC...CTCACAAGCTGTAGCTGCCATACATGCCCATCTAGCTTGCAGTCTCTTCGCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp GGGCATGTATGGCAGCTACAGCTTGTGAGTGACCCCCTTCCCCAGAGTCCGCGAGGTGGTGGACTCTTCTaGGTCGGGTTCGCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: GHVWQLQLVSDPLPQSPRGGGLF*VGFACL
Trigger: GAGACAGGCGAACCCGACGCAGAAGAGTCCACCACC...TCGCGGACTCTGGGGAAGGGGGTCACTCACAAGCTGTAGCTGCCATACATGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp CCGGGGCAGTGGTACAGACGGCTCAGGAACCATTTTAACAGACTTGTCTTCAAGTCGGCCAGGCGGGCCTaGAGCTCGCGGCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PGQWYRRLRNHFNRLVFKSARRA*SSRLSS
Trigger: GGAGCTGAGCCGCGAGCTGCAGGCCCGCCTGGCCGA...CTTGAAGACAAGTCTGTTAAAATGGTTCCTGAGCCGTCTGTACCACTGCCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp CTAGATGGGCATGTATGGCAGCTACAGCTTGTGAGTGACCCCCTTCCCCAGAGTCCTTCCAACGTCCGCTaGCCCGGCAGGTTCCCTCGG +
Preference number: 4 (lower is better)
Translates to: LDGHVWQLQLVSDPLPQSPSNVR*PGRFPR
Trigger: CCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGG...ACTCTGGGGAAGGGGGTCACTCACAAGCTGTAGCTGCCATACATGCCCATCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp GGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCAGGCGCTGATCTCTTaGGCTTGGCGAAGAAATCTG +
Preference number: 4 (lower is better)
Translates to: GCCYMNGPSRGPAPFQRPQALIS*AWRRNL
Trigger: CAGATTTCTTCGCCAAGCGCAAGAGATCAGCGCCTG...CGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380725.2
ENST00000631604.1
CDS-3UTR CCA 90 bp GCGAAAGCGCGAAGAGACTGCAAGCTAGATGGGCATGTATGGCAGCTACAGCTTTCGCTCGCTCAGGCCTaGCCGGCACCCCTCGAGCAC +
Preference number: 4 (lower is better)
Translates to: AKARRDCKLDGHVWQLQLSLAQA*PAPLEH
Trigger: GTGCTCGAGGGGTGCCGGCCAGGCCTGAGCGAGCGA...AAGCTGTAGCTGCCATACATGCCCATCTAGCTTGCAGTCTCTTCGCGCTTTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
CDS-3UTR CCA 90 bp AGTTGCAGCATTTTTCGGCCTCTTTATTTAGAACCCGGCGGACGAGGGGCCGGGCCCCTCGATGCCTGCTaGCTAGCTCGCTCGCTCAGG +
Preference number: 4 (lower is better)
Translates to: SCSIFRPLYLEPGGRGAGPLDAC*LARSLR
Trigger: CCTGAGCGAGCGAGCTAGCCAGCAGGCATCGAGGGG...CCCGGCCCCTCGTCCGCCGGGTTCTAAATAAAGAGGCCGAAAAATGCTGCAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414822.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CCA 90 bp AACAAAACCGAACGCTGCTCTGCGGCAGCCGCCGCCGGTTGCTGCTACATGAACCTGGCTGTCCGGTGGTaGACTCTTCTGCGTCGGGTT +
Preference number: 4 (lower is better)
Translates to: NKTERCSAAAAAGCCYMNLAVRW*TLLRRV
Trigger: AACCCGACGCAGAAGAGTCCACCACCGGACAGCCAG...GTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGAGCAGCGTTCGGTTTTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR CCA 90 bp GAGTTGCAGCATTTTTCGGCCTCTTTATTTAGAACCCGGCGGACGAGGGGCCGGGGCTGCGGCAGGCGCTaGTGCGCACTAGTACTGGGA +
Preference number: 4 (lower is better)
Translates to: ELQHFSASLFRTRRTRGRGCGRR*CALVLG
Trigger: TCCCAGTACTAGTGCGCACCAGCGCCTGCCGCAGCC...CCGGCCCCTCGTCCGCCGGGTTCTAAATAAAGAGGCCGAAAAATGCTGCAACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414822.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CCA 90 bp TCTGCGGCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCACTGATCTCTTGCGCTTaGCGAAGAAATCGGAGATCA +
Preference number: 4 (lower is better)
Translates to: SAAAAAGCCYMNGPSRGPLISCA*RRNRRS
Trigger: TGATCTCCGATTTCTTCGCCAAGCGCAAGAGATCAG...TGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000633020.1
CDS-3UTR CCA 90 bp GCCTTTGGCATAACCAATAACCGAGCTAGTGCGTGGCAGAGCGGTCCACGCCTGAACCGAGCTAGTGCGTaGCAGAGCGGTCCACGCCTG +
Preference number: 4 (lower is better)
Translates to: AFGITNNRASAWQSGPRLNRASA*QSGPRL
Trigger: CAGGCGTGGACCGCTCTGCCACGCACTAGCTCGGTT...CAGGCGTGGACCGCTCTGCCACGCACTAGCTCGGTTATTGGTTATGCCAAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CCA 90 bp GCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGGGCTCTTTGGTCAATAACCAGATGTaGGAGATGGAGAGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: AQRPSNVRCPGRFPRGSLVNNQM*EMESAF
Trigger: AAAGGCACTCTCCATCTCCCACATCTGGTTATTGAC...CAAAGAGCCCCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CCA 90 bp CTGCTCTGCGGCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGAGACTGCAAGCTAGATaGGCATGTATGGCAGCTACA +
Preference number: 4 (lower is better)
Translates to: LLCGSRRRLLLHERSQPRRLQAR*ACMAAT
Trigger: TGTAGCTGCCATACATGCCCATCTAGCTTGCAGTCT...CCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CCA 90 bp TTTGGCATAACCAATAACCGAGCTAGTGCGTGGCAGAGCGGTCCACGCCTGGACGAGGGGCCGGGGCAGTaGTACAGACGGCTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: FGITNNRASAWQSGPRLDEGPGQ*YRRLRN
Trigger: GTTCCTGAGCCGTCTGTACCACTGCCCCGGCCCCTC...GTCCAGGCGTGGACCGCTCTGCCACGCACTAGCTCGGTTATTGGTTATGCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR TCA 90 bp TGCAAGCTAGATGGGCATGTATGGCAGCTACAGCTTGTGAGTGACCCCCTTCCCCCGGTTGCTGCTACATaGACGGTCCCAGCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: CKLDGHVWQLQLVSDPLPPVAAT*TVPAEA
Trigger: GGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGG...GGGAAGGGGGTCACTCACAAGCTGTAGCTGCCATACATGCCCATCTAGCTTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp TGGGAGATGGAGAGTGCCTTTGGCATAACCAATAACCGAGCTAGTGCGTGGCAGCGCCCCCTCGATGCCTaGTGGCTAGCTCGCTCGCTC +
Preference number: 4 (lower is better)
Translates to: WEMESAFGITNNRASAWQRPLDA*WLARSL
Trigger: GAGCGAGCGAGCTAGCCAGCAGGCATCGAGGGGGCG...CTGCCACGCACTAGCTCGGTTATTGGTTATGCCAAAGGCACTCTCCATCTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp GCCTTTGGCATAACCAATAACCGAGCTAGTGCGTGGCAGAGCGGTCCACGCCTGGGTGGTGGACTCTTCTaGGTCGGGTTCGCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: AFGITNNRASAWQSGPRLGGGLF*VGFACL
Trigger: GAGACAGGCGAACCCGACGCAGAAGAGTCCACCACC...CAGGCGTGGACCGCTCTGCCACGCACTAGCTCGGTTATTGGTTATGCCAAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp GCGAAAGCGCGAAGAGACTGCAAGCTAGATGGGCATGTATGGCAGCTACAGCTTCTCACCGCAGCCTCTTaGGCGGGGTCTGCTCCACCG +
Preference number: 4 (lower is better)
Translates to: AKARRDCKLDGHVWQLQLLTAAS*AGSAPP
Trigger: CGGTGGAGCAGACCCCGCGCAAGAGGCTGCGGTGAG...AAGCTGTAGCTGCCATACATGCCCATCTAGCTTGCAGTCTCTTCGCGCTTTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp AGCGCGAAGAGACTGCAAGCTAGATGGGCATGTATGGCAGCTACAGCTTGTGAGCCTTCCAACGTCCGCTaGCCCGGCAGGTTCCCTCGG +
Preference number: 4 (lower is better)
Translates to: SAKRLQARWACMAATACEPSNVR*PGRFPR
Trigger: CCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGG...CTCACAAGCTGTAGCTGCCATACATGCCCATCTAGCTTGCAGTCTCTTCGCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp GGGCCGGGGCAGTGGTACAGACGGCTCAGGAACCATTTTAACAGACTTGTCTTCGCAGCCGCCGCCGGTTaGTGCTACATGAACGGTCCC +
Preference number: 4 (lower is better)
Translates to: GPGQWYRRLRNHFNRLVFAAAAG*CYMNGP
Trigger: GGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGC...GAAGACAAGTCTGTTAAAATGGTTCCTGAGCCGTCTGTACCACTGCCCCGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp GAACGCTGCTCTGCGGCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCAAAGCGCGAAGAGACTaGAAGCTAGATGGGCATGTA +
Preference number: 4 (lower is better)
Translates to: ERCSAAAAAGCCYMNGPSKARRD*KLDGHV
Trigger: TACATGCCCATCTAGCTTGCAGTCTCTTCGCGCTTT...GCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGAGCAGCGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp CCGGGGCAGTGGTACAGACGGCTCAGGAACCATTTTAACAGACTTGTCTTCAAGGCCCGACTCTGCGTGTaGGAGGGACGCGGCGGCTAC +
Preference number: 4 (lower is better)
Translates to: PGQWYRRLRNHFNRLVFKARLCV*EGRGGY
Trigger: GTAGCCGCCGCGTCCCTCGCACACGCAGAGTCGGGC...CTTGAAGACAAGTCTGTTAAAATGGTTCCTGAGCCGTCTGTACCACTGCCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414822.8
ENST00000430149.3
ENST00000616138.2
CDS-3UTR CCA 90 bp CTAGATGGGCATGTATGGCAGCTACAGCTTGTGAGTGACCCCCTTCCCCAGAGTCCCCTCGATGCCTGCTaGCTAGCTCGCTCGCTCAGG +
Preference number: 4 (lower is better)
Translates to: LDGHVWQLQLVSDPLPQSPLDAC*LARSLR
Trigger: CCTGAGCGAGCGAGCTAGCCAGCAGGCATCGAGGGG...ACTCTGGGGAAGGGGGTCACTCACAAGCTGTAGCTGCCATACATGCCCATCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CCA 90 bp AGTGCCTTTGGCATAACCAATAACCGAGCTAGTGCGTGGCAGAGCGGTCCACGCGTGCTGGCTGTCCGGTaGTGGACTCTTCTGCGTCGG +
Preference number: 4 (lower is better)
Translates to: SAFGITNNRASAWQSGPRVLAVR*WTLLRR
Trigger: CCGACGCAGAAGAGTCCACCACCGGACAGCCAGCAC...GCGTGGACCGCTCTGCCACGCACTAGCTCGGTTATTGGTTATGCCAAAGGCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000440480.8
ENST00000631604.1
CDS-3UTR CCA 90 bp ACAGCGAAAGCGCGAAGAGACTGCAAGCTAGATGGGCATGTATGGCAGCTACAGCGGCTCAGCTCCTCGTaGTCCACCGGCCCGAAGAGG +
Preference number: 4 (lower is better)
Translates to: TAKARRDCKLDGHVWQLQRLSSS*STGPKR
Trigger: CCTCTTCGGGCCGGTGGACCACGAGGAGCTGAGCCG...CTGTAGCTGCCATACATGCCCATCTAGCTTGCAGTCTCTTCGCGCTTTCGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CCA 90 bp GCGAAAGCGCGAAGAGACTGCAAGCTAGATGGGCATGTATGGCAGCTACAGCTTCGGCTCAGCTCCTCGTaGTCCACCGGCCCGAAGAGG +
Preference number: 4 (lower is better)
Translates to: AKARRDCKLDGHVWQLQLRLSSS*STGPKR
Trigger: CCTCTTCGGGCCGGTGGACCACGAGGAGCTGAGCCG...AAGCTGTAGCTGCCATACATGCCCATCTAGCTTGCAGTCTCTTCGCGCTTTCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR TCA 90 bp GCCTTTGGCATAACCAATAACCGAGCTAGTGCGTGGCAGAGCGGTCCACGCCTGCGACTTCTCAGGCGCTaGTCTCTTGCGCTTGGCGAA +
Preference number: 4 (lower is better)
Translates to: AFGITNNRASAWQSGPRLRLLRR*SLALGE
Trigger: TTCGCCAAGCGCAAGAGATCAGCGCCTGAGAAGTCG...CAGGCGTGGACCGCTCTGCCACGCACTAGCTCGGTTATTGGTTATGCCAAAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR TCA 90 bp ACAGCGAAAGCGCGAAGAGACTGCAAGCTAGATGGGCATGTATGGCAGCTACAGCCGGTTGCTGCTACATaGACGGTCCCAGCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: TAKARRDCKLDGHVWQLQPVAAT*TVPAEA
Trigger: GGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGG...CTGTAGCTGCCATACATGCCCATCTAGCTTGCAGTCTCTTCGCGCTTTCGCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp TGGGAGATGGAGAGTGCCTTTGGCATAACCAATAACCGAGCTAGTGCGTGGCAGGCCGCCGCCGGTTGCTaGTACATGAACGGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: WEMESAFGITNNRASAWQAAAGC*YMNGPS
Trigger: GCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGC...CTGCCACGCACTAGCTCGGTTATTGGTTATGCCAAAGGCACTCTCCATCTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp GGGCCGGGGCAGTGGTACAGACGGCTCAGGAACCATTTTAACAGACTTGTCTTCAACAAAACCGAACGCTaGTCTGCGGCAGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: GPGQWYRRLRNHFNRLVFNKTER*SAAAAA
Trigger: GGCGGCGGCTGCCGCAGAGCAGCGTTCGGTTTTGTT...GAAGACAAGTCTGTTAAAATGGTTCCTGAGCCGTCTGTACCACTGCCCCGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp CCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGCAGTGTACCTTCTCGTaGAGAATACATTTAGATATA +
Preference number: 4 (lower is better)
Translates to: PAEAQRPSNVRCPGRFPRQCTFS*RIHLDI
Trigger: TATATCTAAATGTATTCTGCACGAGAAGGTACACTG...CCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp AACCGAACGCTGCTCTGCGGCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCAAAGCGCGAAGAGACTaGAAGCTAGATGGGCATGTA +
Preference number: 4 (lower is better)
Translates to: NRTLLCGSRRRLLLHERSKARRD*KLDGHV
Trigger: TACATGCCCATCTAGCTTGCAGTCTCTTCGCGCTTT...GGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGAGCAGCGTTCGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp AGCGCGAAGAGACTGCAAGCTAGATGGGCATGTATGGCAGCTACAGCTTGTGAGGCTCCATCGTGGATGTaGTGCGGAGGGACGCGTCGG +
Preference number: 4 (lower is better)
Translates to: SAKRLQARWACMAATACEAPSWM*CGGTRR
Trigger: CCGACGCGTCCCTCCGCAGCACATCCACGATGGAGC...CTCACAAGCTGTAGCTGCCATACATGCCCATCTAGCTTGCAGTCTCTTCGCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414822.8
ENST00000430149.3
ENST00000616138.2
CDS-3UTR CCA 90 bp GCCTTTGGCATAACCAATAACCGAGCTAGTGCGTGGCAGAGCGGTCCACGCCTGCAAGACGCTCCATCGTaGATGTGCTGGCTGTCCGGT +
Preference number: 4 (lower is better)
Translates to: AFGITNNRASAWQSGPRLQDAPS*MCWLSG
Trigger: ACCGGACAGCCAGCACATCCACGATGGAGCGTCTTG...CAGGCGTGGACCGCTCTGCCACGCACTAGCTCGGTTATTGGTTATGCCAAAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000440480.8
ENST00000631604.1
CDS-3UTR CCA 90 bp TGGGAGATGGAGAGTGCCTTTGGCATAACCAATAACCGAGCTAGTGCGTGGCAGGGCTGCGGCAGGCGCTaGTGCGCACTAGTACTGGGA +
Preference number: 4 (lower is better)
Translates to: WEMESAFGITNNRASAWQGCGRR*CALVLG
Trigger: TCCCAGTACTAGTGCGCACCAGCGCCTGCCGCAGCC...CTGCCACGCACTAGCTCGGTTATTGGTTATGCCAAAGGCACTCTCCATCTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CCA 90 bp TTAGAACCCGGCGGACGAGGGGCCGGGGCAGTGGTACAGACGGCTCAGGAACCACTGATCTCTTGCGCTTaGCGAAGAAATCGGAGATCA +
Preference number: 4 (lower is better)
Translates to: LEPGGRGAGAVVQTAQEPLISCA*RRNRRS
Trigger: TGATCTCCGATTTCTTCGCCAAGCGCAAGAGATCAG...TGGTTCCTGAGCCGTCTGTACCACTGCCCCGGCCCCTCGTCCGCCGGGTTCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
CDS-3UTR CCA 90 bp TGGGAGATGGAGAGTGCCTTTGGCATAACCAATAACCGAGCTAGTGCGTGGCAGGAGGGGCCGGGGCAGTaGTACAGACGGCTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: WEMESAFGITNNRASAWQEGPGQ*YRRLRN
Trigger: GTTCCTGAGCCGTCTGTACCACTGCCCCGGCCCCTC...CTGCCACGCACTAGCTCGGTTATTGGTTATGCCAAAGGCACTCTCCATCTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR TCA 90 bp GGCATAACCAATAACCGAGCTAGTGCGTGGCAGAGCGGTCCACGCCTGGACATACGACTTCTCAGGCGCTaGTCTCTTGCGCTTGGCGAA +
Preference number: 4 (lower is better)
Translates to: GITNNRASAWQSGPRLDIRLLRR*SLALGE
Trigger: TTCGCCAAGCGCAAGAGATCAGCGCCTGAGAAGTCG...TATGTCCAGGCGTGGACCGCTCTGCCACGCACTAGCTCGGTTATTGGTTATGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR TCA 90 bp TGCAAGCTAGATGGGCATGTATGGCAGCTACAGCTTGTGAGTGACCCCCTTCCCGCTACAGCTTGTGAGTaGCCCCCTTCCCCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: CKLDGHVWQLQLVSDPLPATACE*PPSPES
Trigger: GGACTCTGGGGAAGGGGGTCACTCACAAGCTGTAGC...GGGAAGGGGGTCACTCACAAGCTGTAGCTGCCATACATGCCCATCTAGCTTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp GGGCCGGGGCAGTGGTACAGACGGCTCAGGAACCATTTTAACAGACTTGTCTTCGGTGGTGGACTCTTCTaGGTCGGGTTCGCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: GPGQWYRRLRNHFNRLVFGGGLF*VGFACL
Trigger: GAGACAGGCGAACCCGACGCAGAAGAGTCCACCACC...GAAGACAAGTCTGTTAAAATGGTTCCTGAGCCGTCTGTACCACTGCCCCGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp GCGAAAGCGCGAAGAGACTGCAAGCTAGATGGGCATGTATGGCAGCTACAGCTTTGCGGCAGGCGCTGGTaGGCACTAGTACTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: AKARRDCKLDGHVWQLQLCGRRW*ALVLGR
Trigger: CCTTCCCAGTACTAGTGCGCACCAGCGCCTGCCGCA...AAGCTGTAGCTGCCATACATGCCCATCTAGCTTGCAGTCTCTTCGCGCTTTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp GAGATGGAGAGTGCCTTTGGCATAACCAATAACCGAGCTAGTGCGTGGCAGAGCTGCGGCAGGCGCTGGTaGGCACTAGTACTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: EMESAFGITNNRASAWQSCGRRW*ALVLGR
Trigger: CCTTCCCAGTACTAGTGCGCACCAGCGCCTGCCGCA...GCTCTGCCACGCACTAGCTCGGTTATTGGTTATGCCAAAGGCACTCTCCATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp GGGCATGTATGGCAGCTACAGCTTGTGAGTGACCCCCTTCCCCAGAGTCCGCGACAGGCGCTGATCTCTTaGGCTTGGCGAAGAAATCTG +
Preference number: 4 (lower is better)
Translates to: GHVWQLQLVSDPLPQSPRQALIS*AWRRNL
Trigger: CAGATTTCTTCGCCAAGCGCAAGAGATCAGCGCCTG...TCGCGGACTCTGGGGAAGGGGGTCACTCACAAGCTGTAGCTGCCATACATGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380725.2
ENST00000631604.1
CDS-3UTR CCA 90 bp AACCGAACGCTGCTCTGCGGCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCGTCAATAACCAGATGTaGGAGATGGAGAGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: NRTLLCGSRRRLLLHERSVNNQM*EMESAF
Trigger: AAAGGCACTCTCCATCTCCCACATCTGGTTATTGAC...GGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGAGCAGCGTTCGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CCA 90 bp TTAGAACCCGGCGGACGAGGGGCCGGGGCAGTGGTACAGACGGCTCAGGAACCAGTCAATAACCAGATGTaGGAGATGGAGAGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: LEPGGRGAGAVVQTAQEPVNNQM*EMESAF
Trigger: AAAGGCACTCTCCATCTCCCACATCTGGTTATTGAC...TGGTTCCTGAGCCGTCTGTACCACTGCCCCGGCCCCTCGTCCGCCGGGTTCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR TCA 90 bp AGCGCGAAGAGACTGCAAGCTAGATGGGCATGTATGGCAGCTACAGCTTGTGAGGCTACAGCTTGTGAGTaGCCCCCTTCCCCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: SAKRLQARWACMAATACEATACE*PPSPES
Trigger: GGACTCTGGGGAAGGGGGTCACTCACAAGCTGTAGC...CTCACAAGCTGTAGCTGCCATACATGCCCATCTAGCTTGCAGTCTCTTCGCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR TCA 90 bp GAGATGGAGAGTGCCTTTGGCATAACCAATAACCGAGCTAGTGCGTGGCAGAGCGGCAGCTACAGCTTGTaGGTGACCCCCTTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: EMESAFGITNNRASAWQSGSYSL*VTPFPR
Trigger: TCTGGGGAAGGGGGTCACTCACAAGCTGTAGCTGCC...GCTCTGCCACGCACTAGCTCGGTTATTGGTTATGCCAAAGGCACTCTCCATCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp TGGGAGATGGAGAGTGCCTTTGGCATAACCAATAACCGAGCTAGTGCGTGGCAGGGTGGTGGACTCTTCTaGGTCGGGTTCGCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: WEMESAFGITNNRASAWQGGGLF*VGFACL
Trigger: GAGACAGGCGAACCCGACGCAGAAGAGTCCACCACC...CTGCCACGCACTAGCTCGGTTATTGGTTATGCCAAAGGCACTCTCCATCTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp AGCGCGAAGAGACTGCAAGCTAGATGGGCATGTATGGCAGCTACAGCTTGTGAGGGTGGTGGACTCTTCTaGGTCGGGTTCGCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: SAKRLQARWACMAATACEGGGLF*VGFACL
Trigger: GAGACAGGCGAACCCGACGCAGAAGAGTCCACCACC...CTCACAAGCTGTAGCTGCCATACATGCCCATCTAGCTTGCAGTCTCTTCGCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp AGTGCGTGGCAGAGCGGTCCACGCCTGGACATAAATAGAAAATATAAGTTAGTATCGGCCAGGCGGGCCTaGAGCTCGCGGCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SAWQSGPRLDINRKYKLVSARRA*SSRLSS
Trigger: GGAGCTGAGCCGCGAGCTGCAGGCCCGCCTGGCCGA...TACTAACTTATATTTTCTATTTATGTCCAGGCGTGGACCGCTCTGCCACGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp TTTGGCATAACCAATAACCGAGCTAGTGCGTGGCAGAGCGGTCCACGCCTGGACCAGGCGCTGATCTCTTaGGCTTGGCGAAGAAATCGG +
Preference number: 4 (lower is better)
Translates to: FGITNNRASAWQSGPRLDQALIS*AWRRNR
Trigger: CCGATTTCTTCGCCAAGCGCAAGAGATCAGCGCCTG...GTCCAGGCGTGGACCGCTCTGCCACGCACTAGCTCGGTTATTGGTTATGCCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
CDS-3UTR GCA 90 bp CTCTGCGGCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCCAGTGTACCTTCTCGTaGAGAATACATTTAGATATA +
Preference number: 4 (lower is better)
Translates to: LCGSRRRLLLHERSQPRPQCTFS*RIHLDI
Trigger: TATATCTAAATGTATTCTGCACGAGAAGGTACACTG...GGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR CCA 90 bp ACAGCGAAAGCGCGAAGAGACTGCAAGCTAGATGGGCATGTATGGCAGCTACAGCTGGCTGTCCGGTGGTaGACTCTTCTGCGTCGGGTT +
Preference number: 4 (lower is better)
Translates to: TAKARRDCKLDGHVWQLQLAVRW*TLLRRV
Trigger: AACCCGACGCAGAAGAGTCCACCACCGGACAGCCAG...CTGTAGCTGCCATACATGCCCATCTAGCTTGCAGTCTCTTCGCGCTTTCGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CCA 90 bp TGGGAGATGGAGAGTGCCTTTGGCATAACCAATAACCGAGCTAGTGCGTGGCAGCCATCGTGGATGTGCTaGCTGTCCGGTGGTGGACTC +
Preference number: 4 (lower is better)
Translates to: WEMESAFGITNNRASAWQPSWMC*LSGGGL
Trigger: GAGTCCACCACCGGACAGCCAGCACATCCACGATGG...CTGCCACGCACTAGCTCGGTTATTGGTTATGCCAAAGGCACTCTCCATCTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000440480.8
ENST00000631604.1
CDS-3UTR CCA 90 bp GGCATAACCAATAACCGAGCTAGTGCGTGGCAGAGCGGTCCACGCCTGGACATATCCCTCGGGGCTCTTTaGGCTCTAAATTGGCTCACC +
Preference number: 4 (lower is better)
Translates to: GITNNRASAWQSGPRLDISLGAL*ALNWLT
Trigger: GGTGAGCCAATTTAGAGCCCAAAGAGCCCCGAGGGA...TATGTCCAGGCGTGGACCGCTCTGCCACGCACTAGCTCGGTTATTGGTTATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CCA 90 bp GCGAAAGCGCGAAGAGACTGCAAGCTAGATGGGCATGTATGGCAGCTACAGCTTTACCTGGCTGTCCGGTaGTGGACTCTTCTGCGTCGG +
Preference number: 4 (lower is better)
Translates to: AKARRDCKLDGHVWQLQLYLAVR*WTLLRR
Trigger: CCGACGCAGAAGAGTCCACCACCGGACAGCCAGGTA...AAGCTGTAGCTGCCATACATGCCCATCTAGCTTGCAGTCTCTTCGCGCTTTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414822.8
ENST00000430149.3
ENST00000616138.2
CDS-3UTR TCA 90 bp CCCAGAGTCCGCGATGAAAATAAAGTTACACTTGTCAATAACCAGATGTGGGAGGCCCGGACAGCTTCTTaGTCGCCGCGCCGTTGGCGC +
Preference number: 4 (lower is better)
Translates to: PRVRDENKVTLVNNQMWEARTAS*SPRRWR
Trigger: GCGCCAACGGCGCGGCGATCAAGAAGCTGTCCGGGC...CTCCCACATCTGGTTATTGACAAGTGTAACTTTATTTTCATCGCGGACTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
CDS-3UTR TCA 90 bp GCGAAAGCGCGAAGAGACTGCAAGCTAGATGGGCATGTATGGCAGCTACAGCTTCGACTTCTCAGGCGCTaGTCTCTTGCGCTTGGCGAA +
Preference number: 4 (lower is better)
Translates to: AKARRDCKLDGHVWQLQLRLLRR*SLALGE
Trigger: TTCGCCAAGCGCAAGAGATCAGCGCCTGAGAAGTCG...AAGCTGTAGCTGCCATACATGCCCATCTAGCTTGCAGTCTCTTCGCGCTTTCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR TCA 90 bp AAGAGAGACAGCGAAAGCGCGAAGAGACTGCAAGCTAGATGGGCATGTATGGCAGGCAGCTACAGCTTGTaGGTGACCCCCTTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: KRDSESAKRLQARWACMAGSYSL*VTPFPR
Trigger: TCTGGGGAAGGGGGTCACTCACAAGCTGTAGCTGCC...TGCCATACATGCCCATCTAGCTTGCAGTCTCTTCGCGCTTTCGCTGTCTCTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp GAAAGCGCGAAGAGACTGCAAGCTAGATGGGCATGTATGGCAGCTACAGCTTGTGGTGGTGGACTCTTCTaGGTCGGGTTCGCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: ESAKRLQARWACMAATACGGGLF*VGFACL
Trigger: GAGACAGGCGAACCCGACGCAGAAGAGTCCACCACC...ACAAGCTGTAGCTGCCATACATGCCCATCTAGCTTGCAGTCTCTTCGCGCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp AAGCTAGATGGGCATGTATGGCAGCTACAGCTTGTGAGTGACCCCCTTCCCCAGCAGGCGCTGATCTCTTaGGCTTGGCGAAGAAATCGG +
Preference number: 4 (lower is better)
Translates to: KLDGHVWQLQLVSDPLPQQALIS*AWRRNR
Trigger: CCGATTTCTTCGCCAAGCGCAAGAGATCAGCGCCTG...CTGGGGAAGGGGGTCACTCACAAGCTGTAGCTGCCATACATGCCCATCTAGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
CDS-3UTR GCA 90 bp CGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCAGCGCCCTTCCACAGTGTACCTTCTCGTaGAGAATACATTTAGATATA +
Preference number: 4 (lower is better)
Translates to: RRRLLLHERSQPRPSALPQCTFS*RIHLDI
Trigger: TATATCTAAATGTATTCTGCACGAGAAGGTACACTG...TGGAAGGGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR GCA 90 bp CCCAGAGTCCGCGATGAAAATAAAGTTACACTTGTCAATAACCAGATGTGGGAGGCCCGACTCTGCGTGTaGGAGGGACGCGGCGGCTAC +
Preference number: 4 (lower is better)
Translates to: PRVRDENKVTLVNNQMWEARLCV*EGRGGY
Trigger: GTAGCCGCCGCGTCCCTCGCACACGCAGAGTCGGGC...CTCCCACATCTGGTTATTGACAAGTGTAACTTTATTTTCATCGCGGACTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414822.8
ENST00000430149.3
ENST00000616138.2
CDS-3UTR CCA 90 bp AGTGCCTTTGGCATAACCAATAACCGAGCTAGTGCGTGGCAGAGCGGTCCACGCCTTTGGGCTCTAAATTaGCTCACCGCAGCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: SAFGITNNRASAWQSGPRLWALN*LTAASC
Trigger: GCAAGAGGCTGCGGTGAGCCAATTTAGAGCCCAAAG...GCGTGGACCGCTCTGCCACGCACTAGCTCGGTTATTGGTTATGCCAAAGGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CCA 90 bp AAGAGAGACAGCGAAAGCGCGAAGAGACTGCAAGCTAGATGGGCATGTATGGCACAAGACGCTCCATCGTaGATGTGCTGCGGAGGGACG +
Preference number: 4 (lower is better)
Translates to: KRDSESAKRLQARWACMAQDAPS*MCCGGT
Trigger: CGTCCCTCCGCAGCACATCCACGATGGAGCGTCTTG...TGCCATACATGCCCATCTAGCTTGCAGTCTCTTCGCGCTTTCGCTGTCTCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414822.8
ENST00000430149.3
ENST00000616138.2
CDS-3UTR TCA 90 bp AATAAAGTTACACTTGTCAATAACCAGATGTGGGAGATGGAGAGTGCCTTTGGCGCCCGGACAGCTTCTTaGTCGCCGCGCCGTTGGCGC +
Preference number: 4 (lower is better)
Translates to: NKVTLVNNQMWEMESAFGARTAS*SPRRWR
Trigger: GCGCCAACGGCGCGGCGATCAAGAAGCTGTCCGGGC...GCCAAAGGCACTCTCCATCTCCCACATCTGGTTATTGACAAGTGTAACTTTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
CDS-3UTR GCA 90 bp TTAAAGCTTTACACCTTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATCGGCCAGGCGGGCCTaGAGCTCGCGGCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LKLYTLGPVYLLVQNTFRSARRA*SSRLSS
Trigger: GGAGCTGAGCCGCGAGCTGCAGGCCCGCCTGGCCGA...TCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCAAGGTGTAAAGCTTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
ENST00000647251.1
CDS-3UTR GCA 90 bp GCGAAAGCGCGAAGAGACTGCAAGCTAGATGGGCATGTATGGCAGCTACAGCTTCAGGCGCTGATCTCTTaGGCTTGGCGAAGAAATCGG +
Preference number: 4 (lower is better)
Translates to: AKARRDCKLDGHVWQLQLQALIS*AWRRNR
Trigger: CCGATTTCTTCGCCAAGCGCAAGAGATCAGCGCCTG...AAGCTGTAGCTGCCATACATGCCCATCTAGCTTGCAGTCTCTTCGCGCTTTCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
CDS-3UTR GCA 90 bp CCCAGAGTCCGCGATGAAAATAAAGTTACACTTGTCAATAACCAGATGTGGGAGCTCTTGCGCGGGGTCTaGTCCACCGAGCCCACGCCA +
Preference number: 4 (lower is better)
Translates to: PRVRDENKVTLVNNQMWELLRGV*STEPTP
Trigger: TGGCGTGGGCTCGGTGGAGCAGACCCCGCGCAAGAG...CTCCCACATCTGGTTATTGACAAGTGTAACTTTATTTTCATCGCGGACTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp CTGCTACATGAACGGTCCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCAGTGTACCTTCTCGTaGAGAATACATTTAGATATA +
Preference number: 4 (lower is better)
Translates to: LLHERSQPRPSALPTSAAQCTFS*RIHLDI
Trigger: TATATCTAAATGTATTCTGCACGAGAAGGTACACTG...GGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR CCA 90 bp AGTGCGTGGCAGAGCGGTCCACGCCTGGACATAAATAGAAAATATAAGTTAGTACGGCTCAGCTCCTCGTaGTCCACCGGCCCGAAGAGG +
Preference number: 4 (lower is better)
Translates to: SAWQSGPRLDINRKYKLVRLSSS*STGPKR
Trigger: CCTCTTCGGGCCGGTGGACCACGAGGAGCTGAGCCG...TACTAACTTATATTTTCTATTTATGTCCAGGCGTGGACCGCTCTGCCACGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CCA 90 bp GCCTTTGGCATAACCAATAACCGAGCTAGTGCGTGGCAGAGCGGTCCACGCCTGCTGATCTCTTGCGCTTaGCGAAGAAATCGGAGATCA +
Preference number: 4 (lower is better)
Translates to: AFGITNNRASAWQSGPRLLISCA*RRNRRS
Trigger: TGATCTCCGATTTCTTCGCCAAGCGCAAGAGATCAG...CAGGCGTGGACCGCTCTGCCACGCACTAGCTCGGTTATTGGTTATGCCAAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
CDS-3UTR GCA 90 bp TTAAAGCTTTACACCTTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGAGCCGCGCCCCCTCGATaGCTGCTGGCTAGCTCGCTC +
Preference number: 4 (lower is better)
Translates to: LKLYTLGPVYLLVQNTFRAAPPR*LLASSL
Trigger: GAGCGAGCTAGCCAGCAGGCATCGAGGGGGCGCGGC...TCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCAAGGTGTAAAGCTTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
ENST00000647251.1
CDS-3UTR GCA 90 bp AATAAAGTTACACTTGTCAATAACCAGATGTGGGAGATGGAGAGTGCCTTTGGCTCCACTTCGGTCCACTaGAGGCGTCCAGGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: NKVTLVNNQMWEMESAFGSTSVH*RRPGPR
Trigger: GCGGGGCCCTGGACGCCTGCAGTGGACCGAAGTGGA...GCCAAAGGCACTCTCCATCTCCCACATCTGGTTATTGACAAGTGTAACTTTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp CTCTTAAAGCTTTACACCTTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTCTCTTGCGCGGGGTCTaGTCCACCGAGCCCACGCCA +
Preference number: 4 (lower is better)
Translates to: LLKLYTLGPVYLLVQNTFLLRGV*STEPTP
Trigger: TGGCGTGGGCTCGGTGGAGCAGACCCCGCGCAAGAG...AAATGTATTCTGCACGAGAAGGTACACTGGTCCCAAGGTGTAAAGCTTTAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
ENST00000647251.1
CDS-3UTR GCA 90 bp AATAAAGTTACACTTGTCAATAACCAGATGTGGGAGATGGAGAGTGCCTTTGGCCTCACCGCAGCCTCTTaGGCGGGGTCTGCTCCACCG +
Preference number: 4 (lower is better)
Translates to: NKVTLVNNQMWEMESAFGLTAAS*AGSAPP
Trigger: CGGTGGAGCAGACCCCGCGCAAGAGGCTGCGGTGAG...GCCAAAGGCACTCTCCATCTCCCACATCTGGTTATTGACAAGTGTAACTTTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp GAGTTGCAGCATTTTTCGGCCTCTTTATTTAGAACCCGGCGGACGAGGGGCCGGAAAGCGCGAAGAGACTaGAAGCTAGATGGGCATGTA +
Preference number: 4 (lower is better)
Translates to: ELQHFSASLFRTRRTRGRKARRD*KLDGHV
Trigger: TACATGCCCATCTAGCTTGCAGTCTCTTCGCGCTTT...CCGGCCCCTCGTCCGCCGGGTTCTAAATAAAGAGGCCGAAAAATGCTGCAACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414822.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CCA 90 bp CTCTTAAAGCTTTACACCTTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTCGGCTCAGCTCCTCGTaGTCCACCGGCCCGAAGAGG +
Preference number: 4 (lower is better)
Translates to: LLKLYTLGPVYLLVQNTFRLSSS*STGPKR
Trigger: CCTCTTCGGGCCGGTGGACCACGAGGAGCTGAGCCG...AAATGTATTCTGCACGAGAAGGTACACTGGTCCCAAGGTGTAAAGCTTTAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
ENST00000647251.1
CDS-3UTR CCA 90 bp AGTTGCAGCATTTTTCGGCCTCTTTATTTAGAACCCGGCGGACGAGGGGCCGGGCTGATCTCTTGCGCTTaGCGAAGAAATCGGAGATCA +
Preference number: 4 (lower is better)
Translates to: SCSIFRPLYLEPGGRGAGLISCA*RRNRRS
Trigger: TGATCTCCGATTTCTTCGCCAAGCGCAAGAGATCAG...CCCGGCCCCTCGTCCGCCGGGTTCTAAATAAAGAGGCCGAAAAATGCTGCAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414822.8
ENST00000616138.2
CDS-3UTR CCA 90 bp AGCGCGAAGAGACTGCAAGCTAGATGGGCATGTATGGCAGCTACAGCTTGTGAGCTTTGGGCTCTAAATTaGCTCACCGCAGCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: SAKRLQARWACMAATACELWALN*LTAASC
Trigger: GCAAGAGGCTGCGGTGAGCCAATTTAGAGCCCAAAG...CTCACAAGCTGTAGCTGCCATACATGCCCATCTAGCTTGCAGTCTCTTCGCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CCA 90 bp CCCAGAGTCCGCGATGAAAATAAAGTTACACTTGTCAATAACCAGATGTGGGAGGAGGGGCCGGGGCAGTaGTACAGACGGCTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: PRVRDENKVTLVNNQMWEEGPGQ*YRRLRN
Trigger: GTTCCTGAGCCGTCTGTACCACTGCCCCGGCCCCTC...CTCCCACATCTGGTTATTGACAAGTGTAACTTTATTTTCATCGCGGACTCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp ACACCTTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATATAAAAAGAGCCGCGCCCCCTCGATaGCTGCTGGCTAGCTCGCTC +
Preference number: 4 (lower is better)
Translates to: TPWDQCTFSCRIHLDIKRAAPPR*LLASSL
Trigger: GAGCGAGCTAGCCAGCAGGCATCGAGGGGGCGCGGC...TCTTTTTATATCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCAAGGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
ENST00000647251.1
CDS-3UTR GCA 90 bp TGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATATAAAAAGACGTTATCCGGCCCGAAGAGGCTaGGGCAGGCGCTGGTGCGCA +
Preference number: 4 (lower is better)
Translates to: WDQCTFSCRIHLDIKRRYPARRG*GRRWCA
Trigger: TGCGCACCAGCGCCTGCCGCAGCCTCTTCGGGCCGG...ATAACGTCTTTTTATATCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
ENST00000647251.1
CDS-3UTR GCA 90 bp TTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATATAAAAAGACGTTATCGGCCAGGCGGGCCTaGAGCTCGCGGCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LGPVYLLVQNTFRYKKTLSARRA*SSRLSS
Trigger: GGAGCTGAGCCGCGAGCTGCAGGCCCGCCTGGCCGA...TAACGTCTTTTTATATCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
ENST00000647251.1
CDS-3UTR GCA 90 bp TTAAAGCTTTACACCTTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATCCACTTCGGTCCACTaGAGGCGTCCAGGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: LKLYTLGPVYLLVQNTFRSTSVH*RRPGPR
Trigger: GCGGGGCCCTGGACGCCTGCAGTGGACCGAAGTGGA...TCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCAAGGTGTAAAGCTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
ENST00000647251.1
CDS-3UTR GCA 90 bp CTCTTAAAGCTTTACACCTTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTGCCGCCGCCGGTTGCTaGTACATGAACGGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: LLKLYTLGPVYLLVQNTFAAAGC*YMNGPS
Trigger: GCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGC...AAATGTATTCTGCACGAGAAGGTACACTGGTCCCAAGGTGTAAAGCTTTAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
ENST00000647251.1
CDS-3UTR GCA 90 bp AGTGCGTGGCAGAGCGGTCCACGCCTGGACATAAATAGAAAATATAAGTTAGTAAACAAAACCGAACGCTaGTCTGCGGCAGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: SAWQSGPRLDINRKYKLVNKTER*SAAAAA
Trigger: GGCGGCGGCTGCCGCAGAGCAGCGTTCGGTTTTGTT...TACTAACTTATATTTTCTATTTATGTCCAGGCGTGGACCGCTCTGCCACGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CCA 90 bp CCTTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATATAAAAAGACGTCGGCTCAGCTCCTCGTaGTCCACCGGCCCGAAGAGG +
Preference number: 4 (lower is better)
Translates to: PWDQCTFSCRIHLDIKRRRLSSS*STGPKR
Trigger: CCTCTTCGGGCCGGTGGACCACGAGGAGCTGAGCCG...ACGTCTTTTTATATCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
ENST00000647251.1
CDS-3UTR GCA 90 bp ACACCTTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATATAAAAAGAAACGCCCAGCCCGCCTaGGCCCCCTTTATACGCGCG +
Preference number: 4 (lower is better)
Translates to: TPWDQCTFSCRIHLDIKRNAQPA*APFIRA
Trigger: CGCGCGTATAAAGGGGGCGCAGGCGGGCTGGGCGTT...TCTTTTTATATCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCAAGGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000313407.10
ENST00000616138.2
CDS-3UTR GCA 90 bp TGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATATAAAAAGACGTTATGCCGCGCCCCCTCGATaGCTGCTGGCTAGCTCGCTC +
Preference number: 4 (lower is better)
Translates to: WDQCTFSCRIHLDIKRRYAAPPR*LLASSL
Trigger: GAGCGAGCTAGCCAGCAGGCATCGAGGGGGCGCGGC...ATAACGTCTTTTTATATCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
ENST00000647251.1
CDS-3UTR GCA 90 bp CTCTTAAAGCTTTACACCTTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTTGCGGCAGGCGCTGGTaGGCACTAGTACTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LLKLYTLGPVYLLVQNTFCGRRW*ALVLGR
Trigger: CCTTCCCAGTACTAGTGCGCACCAGCGCCTGCCGCA...AAATGTATTCTGCACGAGAAGGTACACTGGTCCCAAGGTGTAAAGCTTTAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
ENST00000647251.1
CDS-3UTR GCA 90 bp ATGAAAATAAAGTTACACTTGTCAATAACCAGATGTGGGAGATGGAGAGTGCCTTCCACTTCGGTCCACTaGAGGCGTCCAGGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: MKIKLHLSITRCGRWRVPSTSVH*RRPGPR
Trigger: GCGGGGCCCTGGACGCCTGCAGTGGACCGAAGTGGA...AGGCACTCTCCATCTCCCACATCTGGTTATTGACAAGTGTAACTTTATTTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp ATGAAAATAAAGTTACACTTGTCAATAACCAGATGTGGGAGATGGAGAGTGCCTGGGACACTAGGCAGCTaGTCCGGCGCCTCCTCGAGG +
Preference number: 4 (lower is better)
Translates to: MKIKLHLSITRCGRWRVPGTLGS*SGASSR
Trigger: CCTCGAGGAGGCGCCGGAGCAGCTGCCTAGTGTCCC...AGGCACTCTCCATCTCCCACATCTGGTTATTGACAAGTGTAACTTTATTTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
CDS-3UTR GCA 90 bp ACACCTTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATATAAAAAGACTCACCGCAGCCTCTTaGGCGGGGTCTGCTCCACCG +
Preference number: 4 (lower is better)
Translates to: TPWDQCTFSCRIHLDIKRLTAAS*AGSAPP
Trigger: CGGTGGAGCAGACCCCGCGCAAGAGGCTGCGGTGAG...TCTTTTTATATCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCAAGGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
ENST00000647251.1
CDS-3UTR GCA 90 bp ACACCTTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATATAAAAAGACCTTCCAACGTCCGCTaGCCCGGCAGGTTCCCTCGG +
Preference number: 4 (lower is better)
Translates to: TPWDQCTFSCRIHLDIKRPSNVR*PGRFPR
Trigger: CCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGG...TCTTTTTATATCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCAAGGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
ENST00000647251.1
CDS-3UTR GCA 90 bp TTAAAGCTTTACACCTTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGAGCAGCCGCCGCCGGTTaGTGCTACATGAACGGTCCC +
Preference number: 4 (lower is better)
Translates to: LKLYTLGPVYLLVQNTFRAAAAG*CYMNGP
Trigger: GGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGC...TCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCAAGGTGTAAAGCTTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
ENST00000647251.1
CDS-3UTR CCA 90 bp GCGATGAAAATAAAGTTACACTTGTCAATAACCAGATGTGGGAGATGGAGAGTGCGAGCACAGCGCACTTaGCCTGTGGAACGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: AMKIKLHLSITRCGRWRVRAQRT*PVERPA
Trigger: GGCTGGGCGTTCCACAGGCCAAGTGCGCTGTGCTCG...CACTCTCCATCTCCCACATCTGGTTATTGACAAGTGTAACTTTATTTTCATCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313407.10
ENST00000616138.2
CDS-3UTR CCA 90 bp CCTTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATATAAAAAGACGTCCCCTCGATGCCTGCTaGCTAGCTCGCTCGCTCAGG +
Preference number: 4 (lower is better)
Translates to: PWDQCTFSCRIHLDIKRRPLDAC*LARSLR
Trigger: CCTGAGCGAGCGAGCTAGCCAGCAGGCATCGAGGGG...ACGTCTTTTTATATCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR CCA 90 bp CCTTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATATAAAAAGACGTGGCTGCGGCAGGCGCTaGTGCGCACTAGTACTGGGA +
Preference number: 4 (lower is better)
Translates to: PWDQCTFSCRIHLDIKRRGCGRR*CALVLG
Trigger: TCCCAGTACTAGTGCGCACCAGCGCCTGCCGCAGCC...ACGTCTTTTTATATCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
ENST00000647251.1
CDS-3UTR CCA 90 bp CTCTTAAAGCTTTACACCTTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAACCGAGCTAGTGCGTaGCAGAGCGGTCCACGCCTG +
Preference number: 4 (lower is better)
Translates to: LLKLYTLGPVYLLVQNTFNRASA*QSGPRL
Trigger: CAGGCGTGGACCGCTCTGCCACGCACTAGCTCGGTT...AAATGTATTCTGCACGAGAAGGTACACTGGTCCCAAGGTGTAAAGCTTTAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CCA 90 bp CCTTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATATAAAAAGACGTGAGGGGCCGGGGCAGTaGTACAGACGGCTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: PWDQCTFSCRIHLDIKRREGPGQ*YRRLRN
Trigger: GTTCCTGAGCCGTCTGTACCACTGCCCCGGCCCCTC...ACGTCTTTTTATATCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR TCA 90 bp AGTGCGTGGCAGAGCGGTCCACGCCTGGACATAAATAGAAAATATAAGTTAGTACGACTTCTCAGGCGCTaGTCTCTTGCGCTTGGCGAA +
Preference number: 4 (lower is better)
Translates to: SAWQSGPRLDINRKYKLVRLLRR*SLALGE
Trigger: TTCGCCAAGCGCAAGAGATCAGCGCCTGAGAAGTCG...TACTAACTTATATTTTCTATTTATGTCCAGGCGTGGACCGCTCTGCCACGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp CCTTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATATAAAAAGACGTTGCGGCAGGCGCTGGTaGGCACTAGTACTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: PWDQCTFSCRIHLDIKRRCGRRW*ALVLGR
Trigger: CCTTCCCAGTACTAGTGCGCACCAGCGCCTGCCGCA...ACGTCTTTTTATATCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
ENST00000647251.1
CDS-3UTR GCA 90 bp TTAAAGCTTTACACCTTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGACCCGAAATCCCCGAGTaGAGCTGGTCAGCGAGAGGC +
Preference number: 4 (lower is better)
Translates to: LKLYTLGPVYLLVQNTFRPEIPE*SWSARG
Trigger: GCCTCTCGCTGACCAGCTGCACTCGGGGATTTCGGG...TCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCAAGGTGTAAAGCTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000633020.1
CDS-3UTR GCA 90 bp TGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATATAAAAAGACGTTATCTCTTGCGCGGGGTCTaGTCCACCGAGCCCACGCCA +
Preference number: 4 (lower is better)
Translates to: WDQCTFSCRIHLDIKRRYLLRGV*STEPTP
Trigger: TGGCGTGGGCTCGGTGGAGCAGACCCCGCGCAAGAG...ATAACGTCTTTTTATATCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
ENST00000647251.1
CDS-3UTR GCA 90 bp TTTACACCTTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATATAAAACTCACCGCAGCCTCTTaGGCGGGGTCTGCTCCACCG +
Preference number: 4 (lower is better)
Translates to: FTPWDQCTFSCRIHLDIKLTAAS*AGSAPP
Trigger: CGGTGGAGCAGACCCCGCGCAAGAGGCTGCGGTGAG...TTTTATATCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCAAGGTGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
ENST00000647251.1
CDS-3UTR GCA 90 bp ATGAAAATAAAGTTACACTTGTCAATAACCAGATGTGGGAGATGGAGAGTGCCTGCAGCCGCCGCCGGTTaGTGCTACATGAACGGTCCC +
Preference number: 4 (lower is better)
Translates to: MKIKLHLSITRCGRWRVPAAAAG*CYMNGP
Trigger: GGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGC...AGGCACTCTCCATCTCCCACATCTGGTTATTGACAAGTGTAACTTTATTTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp TTTACACCTTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATATAAAAAACCGAACGCTGCTCTaGGGCAGCCGCCGCCGGTTG +
Preference number: 4 (lower is better)
Translates to: FTPWDQCTFSCRIHLDIKNRTLL*GSRRRL
Trigger: CAACCGGCGGCGGCTGCCGCAGAGCAGCGTTCGGTT...TTTTATATCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCAAGGTGTAAA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
ENST00000647251.1
CDS-3UTR CCA 90 bp AATAAAGTTACACTTGTCAATAACCAGATGTGGGAGATGGAGAGTGCCTTTGGCCTGGCTGTCCGGTGGTaGACTCTTCTGCGTCGGGTT +
Preference number: 4 (lower is better)
Translates to: NKVTLVNNQMWEMESAFGLAVRW*TLLRRV
Trigger: AACCCGACGCAGAAGAGTCCACCACCGGACAGCCAG...GCCAAAGGCACTCTCCATCTCCCACATCTGGTTATTGACAAGTGTAACTTTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CCA 90 bp TGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATATAAAAAGACGTTATCGGCTCAGCTCCTCGTaGTCCACCGGCCCGAAGAGG +
Preference number: 4 (lower is better)
Translates to: WDQCTFSCRIHLDIKRRYRLSSS*STGPKR
Trigger: CCTCTTCGGGCCGGTGGACCACGAGGAGCTGAGCCG...ATAACGTCTTTTTATATCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
ENST00000647251.1
CDS-3UTR CCA 90 bp GAAAGCGCGAAGAGACTGCAAGCTAGATGGGCATGTATGGCAGCTACAGCTTGTCTGATCTCTTGCGCTTaGCGAAGAAATCGGAGATCA +
Preference number: 4 (lower is better)
Translates to: ESAKRLQARWACMAATACLISCA*RRNRRS
Trigger: TGATCTCCGATTTCTTCGCCAAGCGCAAGAGATCAG...ACAAGCTGTAGCTGCCATACATGCCCATCTAGCTTGCAGTCTCTTCGCGCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
CDS-3UTR CCA 90 bp GCGCGAAGAGACTGCAAGCTAGATGGGCATGTATGGCAGCTACAGCTTGTGAGTGTCAATAACCAGATGTaGGAGATGGAGAGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: ARRDCKLDGHVWQLQLVSVNNQM*EMESAF
Trigger: AAAGGCACTCTCCATCTCCCACATCTGGTTATTGAC...ACTCACAAGCTGTAGCTGCCATACATGCCCATCTAGCTTGCAGTCTCTTCGCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CCA 90 bp TGGGAGATGGAGAGTGCCTTTGGCATAACCAATAACCGAGCTAGTGCGTGGCAGGTCAATAACCAGATGTaGGAGATGGAGAGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: WEMESAFGITNNRASAWQVNNQM*EMESAF
Trigger: AAAGGCACTCTCCATCTCCCACATCTGGTTATTGAC...CTGCCACGCACTAGCTCGGTTATTGGTTATGCCAAAGGCACTCTCCATCTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CCA 90 bp GAAAGCGCGAAGAGACTGCAAGCTAGATGGGCATGTATGGCAGCTACAGCTTGTAGACTGCAAGCTAGATaGGCATGTATGGCAGCTACA +
Preference number: 4 (lower is better)
Translates to: ESAKRLQARWACMAATACRLQAR*ACMAAT
Trigger: TGTAGCTGCCATACATGCCCATCTAGCTTGCAGTCT...ACAAGCTGTAGCTGCCATACATGCCCATCTAGCTTGCAGTCTCTTCGCGCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR TCA 90 bp TGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATATAAAAAGACGTTATCCGGTTGCTGCTACATaGACGGTCCCAGCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: WDQCTFSCRIHLDIKRRYPVAAT*TVPAEA
Trigger: GGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGG...ATAACGTCTTTTTATATCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
ENST00000647251.1
CDS-3UTR TCA 90 bp TTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATATAAAAAGACGTTACCGGTTGCTGCTACATaGACGGTCCCAGCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: LGPVYLLVQNTFRYKKTLPVAAT*TVPAEA
Trigger: GGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGG...TAACGTCTTTTTATATCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
ENST00000647251.1
CDS-3UTR GCA 90 bp ATGAAAATAAAGTTACACTTGTCAATAACCAGATGTGGGAGATGGAGAGTGCCTTGCGGCAGGCGCTGGTaGGCACTAGTACTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: MKIKLHLSITRCGRWRVPCGRRW*ALVLGR
Trigger: CCTTCCCAGTACTAGTGCGCACCAGCGCCTGCCGCA...AGGCACTCTCCATCTCCCACATCTGGTTATTGACAAGTGTAACTTTATTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp TTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATATAAAAAGACGTTAGCAGCCGCCGCCGGTTaGTGCTACATGAACGGTCCC +
Preference number: 4 (lower is better)
Translates to: LGPVYLLVQNTFRYKKTLAAAAG*CYMNGP
Trigger: GGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGC...TAACGTCTTTTTATATCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
ENST00000647251.1
CDS-3UTR CCA 90 bp ATGAAAATAAAGTTACACTTGTCAATAACCAGATGTGGGAGATGGAGAGTGCCTGTGCTGGCTGTCCGGTaGTGGACTCTTCTGCGTCGG +
Preference number: 4 (lower is better)
Translates to: MKIKLHLSITRCGRWRVPVLAVR*WTLLRR
Trigger: CCGACGCAGAAGAGTCCACCACCGGACAGCCAGCAC...AGGCACTCTCCATCTCCCACATCTGGTTATTGACAAGTGTAACTTTATTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000440480.8
ENST00000631604.1
CDS-3UTR CCA 90 bp TTAAAGCTTTACACCTTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGACCATCGTGGATGTGCTaGCTGTCCGGTGGTGGACTC +
Preference number: 4 (lower is better)
Translates to: LKLYTLGPVYLLVQNTFRPSWMC*LSGGGL
Trigger: GAGTCCACCACCGGACAGCCAGCACATCCACGATGG...TCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCAAGGTGTAAAGCTTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000440480.8
ENST00000631604.1
ENST00000647251.1
CDS-3UTR CCA 90 bp CTCTTAAAGCTTTACACCTTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTCAAGACGCTCCATCGTaGATGTGCTGGCTGTCCGGT +
Preference number: 4 (lower is better)
Translates to: LLKLYTLGPVYLLVQNTFQDAPS*MCWLSG
Trigger: ACCGGACAGCCAGCACATCCACGATGGAGCGTCTTG...AAATGTATTCTGCACGAGAAGGTACACTGGTCCCAAGGTGTAAAGCTTTAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000440480.8
ENST00000631604.1
ENST00000647251.1
CDS-3UTR CCA 90 bp CCCAGAGTCCGCGATGAAAATAAAGTTACACTTGTCAATAACCAGATGTGGGAGTCCCTCGGGGCTCTTTaGGCTCTAAATTGGCTCACC +
Preference number: 4 (lower is better)
Translates to: PRVRDENKVTLVNNQMWESLGAL*ALNWLT
Trigger: GGTGAGCCAATTTAGAGCCCAAAGAGCCCCGAGGGA...CTCCCACATCTGGTTATTGACAAGTGTAACTTTATTTTCATCGCGGACTCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR TCA 90 bp TTAAAGCTTTACACCTTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGACGACTTCTCAGGCGCTaGTCTCTTGCGCTTGGCGAA +
Preference number: 4 (lower is better)
Translates to: LKLYTLGPVYLLVQNTFRRLLRR*SLALGE
Trigger: TTCGCCAAGCGCAAGAGATCAGCGCCTGAGAAGTCG...TCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCAAGGTGTAAAGCTTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
ENST00000647251.1
CDS-3UTR TCA 90 bp GCGATGAAAATAAAGTTACACTTGTCAATAACCAGATGTGGGAGATGGAGAGTGCGACTTCTCAGGCGCTaGTCTCTTGCGCTTGGCGAA +
Preference number: 4 (lower is better)
Translates to: AMKIKLHLSITRCGRWRVRLLRR*SLALGE
Trigger: TTCGCCAAGCGCAAGAGATCAGCGCCTGAGAAGTCG...CACTCTCCATCTCCCACATCTGGTTATTGACAAGTGTAACTTTATTTTCATCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR TCA 90 bp CCTTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATATAAAAAGACGTCGACTTCTCAGGCGCTaGTCTCTTGCGCTTGGCGAA +
Preference number: 4 (lower is better)
Translates to: PWDQCTFSCRIHLDIKRRRLLRR*SLALGE
Trigger: TTCGCCAAGCGCAAGAGATCAGCGCCTGAGAAGTCG...ACGTCTTTTTATATCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
ENST00000647251.1
CDS-3UTR TCA 90 bp ATGAAAATAAAGTTACACTTGTCAATAACCAGATGTGGGAGATGGAGAGTGCCTGGCAGCTACAGCTTGTaGGTGACCCCCTTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: MKIKLHLSITRCGRWRVPGSYSL*VTPFPR
Trigger: TCTGGGGAAGGGGGTCACTCACAAGCTGTAGCTGCC...AGGCACTCTCCATCTCCCACATCTGGTTATTGACAAGTGTAACTTTATTTTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp ACACCTTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATATAAAAAGAGGTGGTGGACTCTTCTaGGTCGGGTTCGCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: TPWDQCTFSCRIHLDIKRGGGLF*VGFACL
Trigger: GAGACAGGCGAACCCGACGCAGAAGAGTCCACCACC...TCTTTTTATATCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCAAGGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
ENST00000647251.1
CDS-3UTR GCA 90 bp TTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATATAAAAAGACGTTATGCGGCAGGCGCTGGTaGGCACTAGTACTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LGPVYLLVQNTFRYKKTLCGRRW*ALVLGR
Trigger: CCTTCCCAGTACTAGTGCGCACCAGCGCCTGCCGCA...TAACGTCTTTTTATATCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
ENST00000647251.1
CDS-3UTR GCA 90 bp TGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATATAAAAAGACGTTATCCCGAAATCCCCGAGTaGAGCTGGTCAGCGAGAGGC +
Preference number: 4 (lower is better)
Translates to: WDQCTFSCRIHLDIKRRYPEIPE*SWSARG
Trigger: GCCTCTCGCTGACCAGCTGCACTCGGGGATTTCGGG...ATAACGTCTTTTTATATCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000633020.1
CDS-3UTR GCA 90 bp TGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATATAAAAAGACGTTATAACAAAACCGAACGCTaGTCTGCGGCAGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: WDQCTFSCRIHLDIKRRYNKTER*SAAAAA
Trigger: GGCGGCGGCTGCCGCAGAGCAGCGTTCGGTTTTGTT...ATAACGTCTTTTTATATCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
ENST00000647251.1
CDS-3UTR CCA 90 bp TGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATATAAAAAGACGTTATGTGCTGGCTGTCCGGTaGTGGACTCTTCTGCGTCGG +
Preference number: 4 (lower is better)
Translates to: WDQCTFSCRIHLDIKRRYVLAVR*WTLLRR
Trigger: CCGACGCAGAAGAGTCCACCACCGGACAGCCAGCAC...ATAACGTCTTTTTATATCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000440480.8
ENST00000631604.1
ENST00000647251.1
CDS-3UTR CCA 90 bp TTTACACCTTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATATAAAAGTGCTGGCTGTCCGGTaGTGGACTCTTCTGCGTCGG +
Preference number: 4 (lower is better)
Translates to: FTPWDQCTFSCRIHLDIKVLAVR*WTLLRR
Trigger: CCGACGCAGAAGAGTCCACCACCGGACAGCCAGCAC...TTTTATATCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCAAGGTGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000440480.8
ENST00000631604.1
ENST00000647251.1
CDS-3UTR CCA 90 bp ATGAAAATAAAGTTACACTTGTCAATAACCAGATGTGGGAGATGGAGAGTGCCTCCATCGTGGATGTGCTaGCTGTCCGGTGGTGGACTC +
Preference number: 4 (lower is better)
Translates to: MKIKLHLSITRCGRWRVPPSWMC*LSGGGL
Trigger: GAGTCCACCACCGGACAGCCAGCACATCCACGATGG...AGGCACTCTCCATCTCCCACATCTGGTTATTGACAAGTGTAACTTTATTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000440480.8
ENST00000631604.1
CDS-3UTR CCA 90 bp ATGAAAATAAAGTTACACTTGTCAATAACCAGATGTGGGAGATGGAGAGTGCCTCAAGACGCTCCATCGTaGATGTGCTGCGGAGGGACG +
Preference number: 4 (lower is better)
Translates to: MKIKLHLSITRCGRWRVPQDAPS*MCCGGT
Trigger: CGTCCCTCCGCAGCACATCCACGATGGAGCGTCTTG...AGGCACTCTCCATCTCCCACATCTGGTTATTGACAAGTGTAACTTTATTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414822.8
ENST00000430149.3
ENST00000616138.2
CDS-3UTR CCA 90 bp ACACCTTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATATAAAAAGAGGGCTCTTTGGGCTTTaGCTCACCGCAGCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: TPWDQCTFSCRIHLDIKRGLFGL*LTAASC
Trigger: GCAAGAGGCTGCGGTGAGCCAAAGCCCAAAGAGCCC...TCTTTTTATATCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCAAGGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414822.8
ENST00000633020.1
ENST00000647251.1
CDS-3UTR TCA 90 bp TTTACACCTTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATATAAAAGCTACAGCTTGTGAGTaGCCCCCTTCCCCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: FTPWDQCTFSCRIHLDIKATACE*PPSPES
Trigger: GGACTCTGGGGAAGGGGGTCACTCACAAGCTGTAGC...TTTTATATCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCAAGGTGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR TCA 90 bp TGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATATAAAAAGACGTTATGGCAGCTACAGCTTGTaGGTGACCCCCTTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: WDQCTFSCRIHLDIKRRYGSYSL*VTPFPR
Trigger: TCTGGGGAAGGGGGTCACTCACAAGCTGTAGCTGCC...ATAACGTCTTTTTATATCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp TGCAAGCTAGATGGGCATGTATGGCAGCTACAGCTTGTGAGTGACCCCCTTCCCCAGTGTACCTTCTCGTaGAGAATACATTTAGATATA +
Preference number: 4 (lower is better)
Translates to: CKLDGHVWQLQLVSDPLPQCTFS*RIHLDI
Trigger: TATATCTAAATGTATTCTGCACGAGAAGGTACACTG...GGGAAGGGGGTCACTCACAAGCTGTAGCTGCCATACATGCCCATCTAGCTTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp GGGCCGGGGCAGTGGTACAGACGGCTCAGGAACCATTTTAACAGACTTGTCTTCCAGTGTACCTTCTCGTaGAGAATACATTTAGATATA +
Preference number: 4 (lower is better)
Translates to: GPGQWYRRLRNHFNRLVFQCTFS*RIHLDI
Trigger: TATATCTAAATGTATTCTGCACGAGAAGGTACACTG...GAAGACAAGTCTGTTAAAATGGTTCCTGAGCCGTCTGTACCACTGCCCCGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR GCA 90 bp CTCTTAAAGCTTTACACCTTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTCAGGCGCTGATCTCTTaGGCTTGGCGAAGAAATCTG +
Preference number: 4 (lower is better)
Translates to: LLKLYTLGPVYLLVQNTFQALIS*AWRRNL
Trigger: CAGATTTCTTCGCCAAGCGCAAGAGATCAGCGCCTG...AAATGTATTCTGCACGAGAAGGTACACTGGTCCCAAGGTGTAAAGCTTTAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380725.2
ENST00000631604.1
ENST00000647251.1
CDS-3UTR CCA 90 bp TGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATATAAAAAGACGTTATCTGGCTGTCCGGTGGTaGACTCTTCTGCGTCGGGTT +
Preference number: 4 (lower is better)
Translates to: WDQCTFSCRIHLDIKRRYLAVRW*TLLRRV
Trigger: AACCCGACGCAGAAGAGTCCACCACCGGACAGCCAG...ATAACGTCTTTTTATATCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
ENST00000647251.1
CDS-3UTR CCA 90 bp TTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATATAAAAAGACGTTATACCTGGCTGTCCGGTaGTGGACTCTTCTGCGTCGG +
Preference number: 4 (lower is better)
Translates to: LGPVYLLVQNTFRYKKTLYLAVR*WTLLRR
Trigger: CCGACGCAGAAGAGTCCACCACCGGACAGCCAGGTA...TAACGTCTTTTTATATCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000414822.8
ENST00000430149.3
ENST00000616138.2
ENST00000633020.1
CDS-3UTR CCA 90 bp TTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATATAAAAAGACGTTAGGGCTCTTTGGGCTTTaGCTCACCGCAGCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: LGPVYLLVQNTFRYKKTLGLFGL*LTAASC
Trigger: GCAAGAGGCTGCGGTGAGCCAAAGCCCAAAGAGCCC...TAACGTCTTTTTATATCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414822.8
ENST00000633020.1
ENST00000647251.1
3UTR CAA 72 bp CCTTCCCCAGAGTCCGCGATGAAAATAAAGTTACACTaGTCAATAACCAGATGTGGGAGATGGAGAGTGCCT +
Preference number: 4 (lower is better)
Translates to: PSPESAMKIKLH*SITRCGRWRVP
Trigger: AGGCACTCTCCATCTCCCACATCTGGTTATTGACAAGTGTAACTTTATTTTCATCGCGGACTCTGGGGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CCA 90 bp ATGAAAATAAAGTTACACTTGTCAATAACCAGATGTGGGAGATGGAGAGTGCCTCTTTGGGCTCTAAATTaGCTCACCGCAGCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: MKIKLHLSITRCGRWRVPLWALN*LTAASC
Trigger: GCAAGAGGCTGCGGTGAGCCAATTTAGAGCCCAAAG...AGGCACTCTCCATCTCCCACATCTGGTTATTGACAAGTGTAACTTTATTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CCA 90 bp TTTACACCTTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATATAAAATCCCTCGGGGCTCTTTaGGCTCTAAATTGGCTCACC +
Preference number: 4 (lower is better)
Translates to: FTPWDQCTFSCRIHLDIKSLGAL*ALNWLT
Trigger: GGTGAGCCAATTTAGAGCCCAAAGAGCCCCGAGGGA...TTTTATATCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCAAGGTGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CCA 90 bp CCCAGAGTCCGCGATGAAAATAAAGTTACACTTGTCAATAACCAGATGTGGGAGGTCAATAACCAGATGTaGGAGATGGAGAGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: PRVRDENKVTLVNNQMWEVNNQM*EMESAF
Trigger: AAAGGCACTCTCCATCTCCCACATCTGGTTATTGAC...CTCCCACATCTGGTTATTGACAAGTGTAACTTTATTTTCATCGCGGACTCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CCA 90 bp AATAAAGTTACACTTGTCAATAACCAGATGTGGGAGATGGAGAGTGCCTTTGGCAGACTGCAAGCTAGATaGGCATGTATGGCAGCTACA +
Preference number: 4 (lower is better)
Translates to: NKVTLVNNQMWEMESAFGRLQAR*ACMAAT
Trigger: TGTAGCTGCCATACATGCCCATCTAGCTTGCAGTCT...GCCAAAGGCACTCTCCATCTCCCACATCTGGTTATTGACAAGTGTAACTTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CCA 90 bp CCTTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATATAAAAAGACGTAGACTGCAAGCTAGATaGGCATGTATGGCAGCTACA +
Preference number: 4 (lower is better)
Translates to: PWDQCTFSCRIHLDIKRRRLQAR*ACMAAT
Trigger: TGTAGCTGCCATACATGCCCATCTAGCTTGCAGTCT...ACGTCTTTTTATATCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CCA 90 bp TTTACACCTTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATATAAAACTGATCTCTTGCGCTTaGCGAAGAAATCTGCACCGT +
Preference number: 4 (lower is better)
Translates to: FTPWDQCTFSCRIHLDIKLISCA*RRNLHR
Trigger: ACGGTGCAGATTTCTTCGCCAAGCGCAAGAGATCAG...TTTTATATCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCAAGGTGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380725.2
ENST00000631604.1
ENST00000647251.1
CDS-3UTR GCA 90 bp CTCTTAAAGCTTTACACCTTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTCAGTGTACCTTCTCGTaGAGAATACATTTAGATATA +
Preference number: 4 (lower is better)
Translates to: LLKLYTLGPVYLLVQNTFQCTFS*RIHLDI
Trigger: TATATCTAAATGTATTCTGCACGAGAAGGTACACTG...AAATGTATTCTGCACGAGAAGGTACACTGGTCCCAAGGTGTAAAGCTTTAAGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
ENST00000647251.1
CDS-3UTR GCA 90 bp CCTTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATATAAAAAGACGTCAGTGTACCTTCTCGTaGAGAATACATTTAGATATA +
Preference number: 4 (lower is better)
Translates to: PWDQCTFSCRIHLDIKRRQCTFS*RIHLDI
Trigger: TATATCTAAATGTATTCTGCACGAGAAGGTACACTG...ACGTCTTTTTATATCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
ENST00000647251.1
CDS GCA 90 bp CTGGCGGCCGCGGTGCCGGCCGCGGGACGTCCCGAAATCCCCGAGTaGAGCTGGTCAGCGAGAGGCTCCTGGCCGCGCTGCCCCTGGTTC +
Preference number: 5 (lower is better)
Translates to: LAAAVPAAGRPEIPE*SWSARGSWPRCPWF
Trigger: GAACCAGGGGCAGCGCGGCCAGGAGCCTCTCGCTGACCAGCTGCACTCGGGGATTTCGGGACGTCCCGCGGCCGGCACCGCGGCCGCCAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000633020.1
CDS GCA 90 bp GGTTCGCCTGTCTCGTCCGGACGGCAGCCGCGCCCCCTCGATGCCTaGTGGCTAGCTCGCTCGCTCAGGCCTGGCCGGCACCCCTCGAGC +
Preference number: 5 (lower is better)
Translates to: GSPVSSGRQPRPLDA*WLARSLRPGRHPSS
Trigger: GCTCGAGGGGTGCCGGCCAGGCCTGAGCGAGCGAGCTAGCCAGCAGGCATCGAGGGGGCGCGGCTGCCGTCCGGACGAGACAGGCGAACC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000633020.1
ENST00000681969.1
CDS GCA 90 bp GTCGGGTTCGCCTGTCTCGTCCGGACGGCAGCCGCGCCCCCTCGATaGCTGCTGGCTAGCTCGCTCGCTCAGGCCTGGCCGGCACCCCTC +
Preference number: 5 (lower is better)
Translates to: VGFACLVRTAAAPPR*LLASSLAQAWPAPL
Trigger: GAGGGGTGCCGGCCAGGCCTGAGCGAGCGAGCTAGCCAGCAGGCATCGAGGGGGCGCGGCTGCCGTCCGGACGAGACAGGCGAACCCGAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000633020.1
ENST00000681969.1
CDS GCA 90 bp GGAGGCCGGGCGCAAGGGAGACCCCGCGCCGCCCGACTCTGCGTGTaGGAGGGACGCGGCGGCTACCTGGCTGTCCGGTGGTGGACTCTT +
Preference number: 5 (lower is better)
Translates to: GGRAQGRPRAARLCV*EGRGGYLAVRWWTL
Trigger: AAGAGTCCACCACCGGACAGCCAGGTAGCCGCCGCGTCCCTCGCACACGCAGAGTCGGGCGGCGCGGGGTCTCCCTTGCGCCCGGCCTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414822.8
ENST00000430149.3
ENST00000616138.2
ENST00000633020.1
CDS CCA 90 bp GCTCAGGCCTGGCCGGCACCCCTCGAGCACAGCGCACTTGGCCTGTaGAACGCCCAGCCCGCCTGCGCCCCCTTTATACGCGCGGGCCCC +
Preference number: 5 (lower is better)
Translates to: AQAWPAPLEHSALGL*NAQPACAPFIRAGP
Trigger: GGGGCCCGCGCGTATAAAGGGGGCGCAGGCGGGCTGGGCGTTCCACAGGCCAAGTGCGCTGTGCTCGAGGGGTGCCGGCCAGGCCTGAGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616138.2
CDS GCA 90 bp GCGAGGGACGCGGCGGCTACCTGGCTGTCCGGTGGTGGACTCTTCTaGGTCGGGTTCGCCTGTCTCGTCCGGACGGCAGCCGCGCCCCCT +
Preference number: 5 (lower is better)
Translates to: ARDAAATWLSGGGLF*VGFACLVRTAAAPP
Trigger: AGGGGGCGCGGCTGCCGTCCGGACGAGACAGGCGAACCCGACGCAGAAGAGTCCACCACCGGACAGCCAGGTAGCCGCCGCGTCCCTCGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000414822.8
ENST00000430149.3
ENST00000616138.2
ENST00000633020.1
CDS CCA 90 bp GCCGCGCCCCCTCGATGCCTGCTGGCTAGCTCGCTCGCTCAGGCCTaGCCGGCACCCCTCGAGCACAGCGCACTTGGCCTGTGGAACGCC +
Preference number: 5 (lower is better)
Translates to: AAPPRCLLASSLAQA*PAPLEHSALGLWNA
Trigger: GGCGTTCCACAGGCCAAGTGCGCTGTGCTCGAGGGGTGCCGGCCAGGCCTGAGCGAGCGAGCTAGCCAGCAGGCATCGAGGGGGCGCGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313407.10
ENST00000616138.2
CDS CCA 90 bp TCGCCTGTCTCGTCCGGACGGCAGCCGCGCCCCCTCGATGCCTGCTaGCTAGCTCGCTCGCTCAGGCCTGGCCGGCACCCCTCGAGCACA +
Preference number: 5 (lower is better)
Translates to: SPVSSGRQPRPLDAC*LARSLRPGRHPSST
Trigger: TGTGCTCGAGGGGTGCCGGCCAGGCCTGAGCGAGCGAGCTAGCCAGCAGGCATCGAGGGGGCGCGGCTGCCGTCCGGACGAGACAGGCGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000633020.1
ENST00000681969.1
CDS-3UTR CAA 90 bp GCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGGGCTCGAGCACAGCGCACTaGGCCTGTGGAACGCCCAGC +
Preference number: 5 (lower is better)
Translates to: AEAQRPSNVRCPGRFPRGSSTAH*ACGTPS
Trigger: GCTGGGCGTTCCACAGGCCAAGTGCGCTGTGCTCGA...GCCCCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313407.10
ENST00000616138.2
CDS-3UTR CAA 90 bp CCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGGGCTGGCAGCCGCCGCCGGTaGCTGCTACATGAACGGTCC +
Preference number: 5 (lower is better)
Translates to: PRPSALPTSAAPAGSLGAGSRRR*LLHERS
Trigger: GGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCC...AGCCCCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR CAA 90 bp CCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGGGCAGCCGCCGCCGGTaGCTGCTACATGAACGGTCC +
Preference number: 5 (lower is better)
Translates to: PAEAQRPSNVRCPGRFPRGSRRR*LLHERS
Trigger: GGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCC...CCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS CCA 90 bp CTCGCTCGCTCAGGCCTGGCCGGCACCCCTCGAGCACAGCGCACTTaGCCTGTGGAACGCCCAGCCCGCCTGCGCCCCCTTTATACGCGC +
Preference number: 5 (lower is better)
Translates to: LARSGLAGTPRAQRT*PVERPARLRPLYTR
Trigger: GCGCGTATAAAGGGGGCGCAGGCGGGCTGGGCGTTCCACAGGCCAAGTGCGCTGTGCTCGAGGGGTGCCGGCCAGGCCTGAGCGAGCGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313407.10
ENST00000616138.2
CDS CCA 90 bp CCCGCGCCGCCCGACTCTGCGTGTGCGAGGGACGCGGCGGCTACCTaGCTGTCCGGTGGTGGACTCTTCTGCGTCGGGTTCGCCTGTCTC +
Preference number: 5 (lower is better)
Translates to: PAPPDSACARDAAAT*LSGGGLFCVGFACL
Trigger: GAGACAGGCGAACCCGACGCAGAAGAGTCCACCACCGGACAGCCAGGTAGCCGCCGCGTCCCTCGCACACGCAGAGTCGGGCGGCGCGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414822.8
ENST00000430149.3
ENST00000616138.2
ENST00000633020.1
CDS-3UTR CAA 90 bp CGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGGGCTCTCGAGCACAGCGCACTaGGCCTGTGGAACGCCCAGC +
Preference number: 5 (lower is better)
Translates to: RGPAPFQRPLPRQVPSGLSSTAH*ACGTPS
Trigger: GCTGGGCGTTCCACAGGCCAAGTGCGCTGTGCTCGA...GAGCCCCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313407.10
ENST00000616138.2
CDS-3UTR CAA 90 bp GCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCAGCGCCCTTCGCTCACCGCAGCCTCTaGCGCGGGGTCTGCTCCACC +
Preference number: 5 (lower is better)
Translates to: AAAGCCYMNGPSRGPAPFAHRSL*RGVCST
Trigger: GGTGGAGCAGACCCCGCGCAAGAGGCTGCGGTGAGC...GAAGGGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR CAA 90 bp TCCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGCAGCCGCCGCCGGTaGCTGCTACATGAACGGTCC +
Preference number: 5 (lower is better)
Translates to: SQPRPSALPTSAAPAGSLGSRRR*LLHERS
Trigger: GGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCC...GAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS TCA 90 bp TGCGCTTGGCGAAGAAATCGGAGATCAGAGGCCCGGACAGCTTCTTaGTCGCCGCGCCGTTGGCGCTGGCGGCCGCGGTGCCGGCCGCGG +
Preference number: 5 (lower is better)
Translates to: CAWRRNRRSEARTAS*SPRRWRWRPRCRPR
Trigger: CCGCGGCCGGCACCGCGGCCGCCAGCGCCAACGGCGCGGCGATCAAGAAGCTGTCCGGGCCTCTGATCTCCGATTTCTTCGCCAAGCGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000633020.1
CDS-3UTR CAA 90 bp CAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGGGCTCTTTGGGCGGCAGCCGCCGCCGGTaGCTGCTACATGAACGGTCC +
Preference number: 5 (lower is better)
Translates to: QRPSNVRCPGRFPRGSLGGSRRR*LLHERS
Trigger: GGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCC...GCCCAAAGAGCCCCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR CAA 90 bp CGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGGGCTCTTCCCTCGGGGCTCTTaGGGCTTTGGCTCACCGCAG +
Preference number: 5 (lower is better)
Translates to: RGPAPFQRPLPRQVPSGLFPRGS*GFGSPQ
Trigger: CTGCGGTGAGCCAAAGCCCAAAGAGCCCCGAGGGAA...GAGCCCCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000414822.8
ENST00000633020.1
CDS GCA 90 bp CTGGGAAGGTCCCACGGGCGACAAGACGCTCCATCGTGGATGTGCTaGGGAGGGACGCGTCGGACATGGCCCGGGGCTGCGCAAACGCGG +
Preference number: 5 (lower is better)
Translates to: LGRSHGRQDAPSWMC*GGTRRTWPGAAQTR
Trigger: CCGCGTTTGCGCAGCCCCGGGCCATGTCCGACGCGTCCCTCCGCAGCACATCCACGATGGAGCGTCTTGTCGCCCGTGGGACCTTCCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414822.8
ENST00000430149.3
ENST00000616138.2
ENST00000633020.1
CDS CCA 90 bp CTCTGCGTGTGCGAGGGACGCGGCGGCTACCTGGCTGTCCGGTGGTaGACTCTTCTGCGTCGGGTTCGCCTGTCTCGTCCGGACGGCAGC +
Preference number: 5 (lower is better)
Translates to: LCVCEGRGGYLAVRW*TLLRRVRLSRPDGS
Trigger: GCTGCCGTCCGGACGAGACAGGCGAACCCGACGCAGAAGAGTCCACCACCGGACAGCCAGGTAGCCGCCGCGTCCCTCGCACACGCAGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414822.8
ENST00000430149.3
ENST00000616138.2
ENST00000633020.1
CDS CCA 90 bp CGACTCTGCGTGTGCGAGGGACGCGGCGGCTACCTGGCTGTCCGGTaGTGGACTCTTCTGCGTCGGGTTCGCCTGTCTCGTCCGGACGGC +
Preference number: 5 (lower is better)
Translates to: RLCVCEGRGGYLAVR*WTLLRRVRLSRPDG
Trigger: GCCGTCCGGACGAGACAGGCGAACCCGACGCAGAAGAGTCCACCACCGGACAGCCAGGTAGCCGCCGCGTCCCTCGCACACGCAGAGTCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414822.8
ENST00000430149.3
ENST00000616138.2
ENST00000633020.1
CDS-3UTR CAA 90 bp CTGCTACATGAACGGTCCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCGGCCCGGACAGCTTCTaGATCGCCGCGCCGTTGGCG +
Preference number: 5 (lower is better)
Translates to: LLHERSQPRPSALPTSAAGPDSF*IAAPLA
Trigger: CGCCAACGGCGCGGCGATCAAGAAGCTGTCCGGGCC...GGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000633020.1
CDS-3UTR CAA 90 bp GAACGCTGCTCTGCGGCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCGGCCCGGACAGCTTCTaGATCGCCGCGCCGTTGGCG +
Preference number: 5 (lower is better)
Translates to: ERCSAAAAAGCCYMNGPSGPDSF*IAAPLA
Trigger: CGCCAACGGCGCGGCGATCAAGAAGCTGTCCGGGCC...GCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGAGCAGCGTTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000633020.1
CDS-3UTR CAA 90 bp GAACGCTGCTCTGCGGCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCGCTCACCGCAGCCTCTaGCGCGGGGTCTGCTCCACC +
Preference number: 5 (lower is better)
Translates to: ERCSAAAAAGCCYMNGPSAHRSL*RGVCST
Trigger: GGTGGAGCAGACCCCGCGCAAGAGGCTGCGGTGAGC...GCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGAGCAGCGTTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS GCA 90 bp GACGCTCCATCGTGGATGTGCTGGCTGTCCGGTGGTGGACTCTTCTaGGTCGGGTTCGCCTGTCTCGTCCGGACGGCAGCCGCGCCCCCT +
Preference number: 5 (lower is better)
Translates to: DAPSWMCWLSGGGLF*VGFACLVRTAAAPP
Trigger: AGGGGGCGCGGCTGCCGTCCGGACGAGACAGGCGAACCCGACGCAGAAGAGTCCACCACCGGACAGCCAGCACATCCACGATGGAGCGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000440480.8
ENST00000631604.1
ENST00000647251.1
CDS GCA 90 bp ACGGCGCGGGGACATCGCCCGACGACTTCTCAGGCGCTGATCTCTTaGGCTTGGCGAAGAAATCTGCGGGCGACAGCGCGCGCGGCCGGT +
Preference number: 5 (lower is better)
Translates to: TARGHRPTTSQALIS*AWRRNLRATARAAG
Trigger: ACCGGCCGCGCGCGCTGTCGCCCGCAGATTTCTTCGCCAAGCGCAAGAGATCAGCGCCTGAGAAGTCGTCGGGCGATGTCCCCGCGCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471157.2
ENST00000631746.1
CDS CCA 90 bp CGGGGACATCGCCCGACGACTTCTCAGGCGCTGATCTCTTGCGCTTaGCGAAGAAATCTGCGGGCGACAGCGCGCGCGGCCGGTCAGGGC +
Preference number: 5 (lower is better)
Translates to: RGHRPTTSQALISCA*RRNLRATARAAGQG
Trigger: GCCCTGACCGGCCGCGCGCGCTGTCGCCCGCAGATTTCTTCGCCAAGCGCAAGAGATCAGCGCCTGAGAAGTCGTCGGGCGATGTCCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471157.2
ENST00000631746.1
CDS-3UTR CAA 90 bp GGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGGCTCACCGCAGCCTCTaGCGCGGGGTCTGCTCCACC +
Preference number: 5 (lower is better)
Translates to: GCCYMNGPSRGPAPFQRPAHRSL*RGVCST
Trigger: GGTGGAGCAGACCCCGCGCAAGAGGCTGCGGTGAGC...CGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR CAA 90 bp GAACGCTGCTCTGCGGCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCGGCAGCCGCCGCCGGTaGCTGCTACATGAACGGTCC +
Preference number: 5 (lower is better)
Translates to: ERCSAAAAAGCCYMNGPSGSRRR*LLHERS
Trigger: GGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCC...GCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGAGCAGCGTTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR CAA 90 bp CAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGGGCTCTTTGGGCGGGGCTCTTTGGGCTTaGGCTCACCGCAGCCTCTTG +
Preference number: 5 (lower is better)
Translates to: QRPSNVRCPGRFPRGSLGGALWA*AHRSLL
Trigger: CAAGAGGCTGCGGTGAGCCAAAGCCCAAAGAGCCCC...GCCCAAAGAGCCCCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000414822.8
ENST00000633020.1
CDS-3UTR CAA 90 bp CCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGGGCTCTTTGGTTCCCTCGGGGCTCTTaGGGCTTTGGCTCACCGCAG +
Preference number: 5 (lower is better)
Translates to: PSALPTSAAPAGSLGALWFPRGS*GFGSPQ
Trigger: CTGCGGTGAGCCAAAGCCCAAAGAGCCCCGAGGGAA...CCAAAGAGCCCCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000414822.8
ENST00000633020.1
CDS GCA 90 bp GTACTGGGAAGGTCCCACGGGCGACAAGACGCTCCATCGTGGATGTaGTGCGGAGGGACGCGTCGGACATGGCCCGGGGCTGCGCAAACG +
Preference number: 5 (lower is better)
Translates to: VLGRSHGRQDAPSWM*CGGTRRTWPGAAQT
Trigger: CGTTTGCGCAGCCCCGGGCCATGTCCGACGCGTCCCTCCGCAGCACATCCACGATGGAGCGTCTTGTCGCCCGTGGGACCTTCCCAGTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414822.8
ENST00000430149.3
ENST00000616138.2
ENST00000633020.1
CDS CCA 90 bp CAAGACGCTCCATCGTGGATGTGCTGCGGAGGGACGCGTCGGACATaGCCCGGGGCTGCGCAAACGCGGGCAGCGAGAGAGGAGAGGACA +
Preference number: 5 (lower is better)
Translates to: QDAPSWMCCGGTRRT*PGAAQTRAAREERT
Trigger: TGTCCTCTCCTCTCTCGCTGCCCGCGTTTGCGCAGCCCCGGGCCATGTCCGACGCGTCCCTCCGCAGCACATCCACGATGGAGCGTCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414822.8
ENST00000430149.3
ENST00000616138.2
ENST00000633020.1
CDS CCA 90 bp GCACTAGTACTGGGAAGGTCCCACGGGCGACAAGACGCTCCATCGTaGATGTGCTGCGGAGGGACGCGTCGGACATGGCCCGGGGCTGCG +
Preference number: 5 (lower is better)
Translates to: ALVLGRSHGRQDAPS*MCCGGTRRTWPGAA
Trigger: CGCAGCCCCGGGCCATGTCCGACGCGTCCCTCCGCAGCACATCCACGATGGAGCGTCTTGTCGCCCGTGGGACCTTCCCAGTACTAGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414822.8
ENST00000430149.3
ENST00000616138.2
ENST00000633020.1
CDS-3UTR CAA 90 bp GCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGGGCGCTGATCTCTTGCGCTaGGCGAAGAAATCGGAGATC +
Preference number: 5 (lower is better)
Translates to: AEAQRPSNVRCPGRFPRGADLLR*AKKSEI
Trigger: GATCTCCGATTTCTTCGCCAAGCGCAAGAGATCAGC...GCCCCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000633020.1
CDS TCA 90 bp AGAGGGACACGGCGCGGGGACATCGCCCGACGACTTCTCAGGCGCTaGTCTCTTGCGCTTGGCGAAGAAATCTGCGGGCGACAGCGCGCG +
Preference number: 5 (lower is better)
Translates to: RGTRRGDIARRLLRR*SLALGEEICGRQRA
Trigger: CGCGCGCTGTCGCCCGCAGATTTCTTCGCCAAGCGCAAGAGATCAGCGCCTGAGAAGTCGTCGGGCGATGTCCCCGCGCCGTGTCCCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471157.2
ENST00000631746.1
CDS GCA 90 bp TCTTTGGGCTCTAAATTGGCTCACCGCAGCCTCTTGCGCGGGGTCTaGTCCACCGAGCCCACGCCAGGGGCGGCGCTTGGAGAGGGACAC +
Preference number: 5 (lower is better)
Translates to: SLGSKLAHRSLLRGV*STEPTPGAALGEGH
Trigger: GTGTCCCTCTCCAAGCGCCGCCCCTGGCGTGGGCTCGGTGGAGCAGACCCCGCGCAAGAGGCTGCGGTGAGCCAATTTAGAGCCCAAAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000430149.3
ENST00000440480.8
ENST00000471157.2
ENST00000616138.2
ENST00000631604.1
ENST00000631746.1
ENST00000681969.1
CDS GCA 90 bp ATCGTGGATGTGCTGCGGAGGGACGCGTCGGACATGGCCCGGGGCTaGGCAAACGCGGGCAGCGAGAGAGGAGAGGACAGCGAGAAGAAG +
Preference number: 5 (lower is better)
Translates to: IVDVLRRDASDMARG*ANAGSERGEDSEKK
Trigger: CTTCTTCTCGCTGTCCTCTCCTCTCTCGCTGCCCGCGTTTGCGCAGCCCCGGGCCATGTCCGACGCGTCCCTCCGCAGCACATCCACGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414822.8
ENST00000430149.3
ENST00000616138.2
ENST00000633020.1
CDS GCA 90 bp CTTGCGCTTGGCGAAGAAATCTGGCTGTCCGGTGGTGGACTCTTCTaGGTCGGGTTCGCCTGTCTCGTCCGGACGGCAGCCGCGCCCCCT +
Preference number: 5 (lower is better)
Translates to: LALGEEIWLSGGGLF*VGFACLVRTAAAPP
Trigger: AGGGGGCGCGGCTGCCGTCCGGACGAGACAGGCGAACCCGACGCAGAAGAGTCCACCACCGGACAGCCAGATTTCTTCGCCAAGCGCAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681969.1
CDS-3UTR CAA 90 bp CGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGGGCTCTCTTTGGGCTCTAAATaGGCTCACCGCAGCCTCTTG +
Preference number: 5 (lower is better)
Translates to: RGPAPFQRPLPRQVPSGLSLGSK*AHRSLL
Trigger: CAAGAGGCTGCGGTGAGCCAATTTAGAGCCCAAAGA...GAGCCCCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CAA 90 bp GAACGGTCCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTGCTGATCTCTTGCGCTaGGCGAAGAAATCTGCACCG +
Preference number: 5 (lower is better)
Translates to: ERSQPRPSALPTSAAPAGADLLR*AKKSAP
Trigger: CGGTGCAGATTTCTTCGCCAAGCGCAAGAGATCAGC...ACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGGACCGTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380725.2
ENST00000631604.1
CDS-3UTR CAA 90 bp CCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGGGCTCTTTGGGCTGATCTCTTGCGCTaGGCGAAGAAATCGGAGATC +
Preference number: 5 (lower is better)
Translates to: PSALPTSAAPAGSLGALWADLLR*AKKSEI
Trigger: GATCTCCGATTTCTTCGCCAAGCGCAAGAGATCAGC...CCAAAGAGCCCCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000633020.1
CDS-3UTR CAA 90 bp TCTGCGGCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCATCAGGCGCTGATCTCTaGCGCTTGGCGAAGAAATCG +
Preference number: 5 (lower is better)
Translates to: SAAAAAGCCYMNGPSRGPSGADL*RLAKKS
Trigger: CGATTTCTTCGCCAAGCGCAAGAGATCAGCGCCTGA...TGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000633020.1
CDS-3UTR CAA 90 bp CGCTGCTCTGCGGCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGATCAGGCGCTGATCTCTaGCGCTTGGCGAAGAAATCG +
Preference number: 5 (lower is better)
Translates to: RCSAAAAAGCCYMNGPSRSGADL*RLAKKS
Trigger: CGATTTCTTCGCCAAGCGCAAGAGATCAGCGCCTGA...TCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGAGCAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000633020.1
CDS-3UTR CAA 90 bp AACGGTCCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTTCTTTGGGCTCTAAATaGGCTCACCGCAGCCTCTTG +
Preference number: 5 (lower is better)
Translates to: NGPSRGPAPFQRPLPRQVSLGSK*AHRSLL
Trigger: CAAGAGGCTGCGGTGAGCCAATTTAGAGCCCAAAGA...AACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGGACCGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CAA 90 bp TCTGCGGCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCATTCCCTCGGGGCTCTTaGGGCTCTAAATTGGCTCAC +
Preference number: 5 (lower is better)
Translates to: SAAAAAGCCYMNGPSRGPFPRGS*GSKLAH
Trigger: GTGAGCCAATTTAGAGCCCAAAGAGCCCCGAGGGAA...TGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CAA 90 bp TCTGCGGCAGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCAGCTGATCTCTTGCGCTaGGCGAAGAAATCTGCACCG +
Preference number: 5 (lower is better)
Translates to: SAAAAAGCCYMNGPSRGPADLLR*AKKSAP
Trigger: CGGTGCAGATTTCTTCGCCAAGCGCAAGAGATCAGC...TGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380725.2
ENST00000631604.1
CDS-3UTR CAA 90 bp GCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCAGCGCCCTTCTCAGGCGCTGATCTCTaGCGCTTGGCGAAGAAATCT +
Preference number: 5 (lower is better)
Translates to: AAAGCCYMNGPSRGPAPFSGADL*RLAKKS
Trigger: AGATTTCTTCGCCAAGCGCAAGAGATCAGCGCCTGA...GAAGGGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380725.2
ENST00000631604.1
CDS TCA 90 bp AGAGGGACACGGCGCGGGGACATCGCCCGACGACTTCTCAGGCGCTaGTCTCTTGCGCTTGGCGAAGAAATCGGAGATCAGAGGCCCGGA +
Preference number: 5 (lower is better)
Translates to: RGTRRGDIARRLLRR*SLALGEEIGDQRPG
Trigger: TCCGGGCCTCTGATCTCCGATTTCTTCGCCAAGCGCAAGAGATCAGCGCCTGAGAAGTCGTCGGGCGATGTCCCCGCGCCGTGTCCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000633020.1
CDS TCA 90 bp AGAGGGACACGGCGCGGGGACATCGCCCGACGACTTCTCAGGCGCTaGTCTCTTGCGCTTGGCGAAGAAATCTGGCTGTCCGGTGGTGGA +
Preference number: 5 (lower is better)
Translates to: RGTRRGDIARRLLRR*SLALGEEIWLSGGG
Trigger: TCCACCACCGGACAGCCAGATTTCTTCGCCAAGCGCAAGAGATCAGCGCCTGAGAAGTCGTCGGGCGATGTCCCCGCGCCGTGTCCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681969.1
CDS-3UTR CAA 90 bp AGCCGCCGCCGGTTGCTGCTACATGAACGGTCCCAGCCGAGGCCCAGCGCCCTTTCTTTGGGCTCTAAATaGGCTCACCGCAGCCTCTTG +
Preference number: 5 (lower is better)
Translates to: SRRRLLLHERSQPRPSALSLGSK*AHRSLL
Trigger: CAAGAGGCTGCGGTGAGCCAATTTAGAGCCCAAAGA...AAGGGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CAA 90 bp CTGCTACATGAACGGTCCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCTTCCCTCGGGGCTCTTaGGGCTCTAAATTGGCTCAC +
Preference number: 5 (lower is better)
Translates to: LLHERSQPRPSALPTSAAFPRGS*GSKLAH
Trigger: GTGAGCCAATTTAGAGCCCAAAGAGCCCCGAGGGAA...GGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CAA 90 bp CGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTCCCTCGGGGCTCTTAAAGCTTTACACCTaGGGACCAGTGTACCTTCTC +
Preference number: 5 (lower is better)
Translates to: RGPAPFQRPLPRQVPSGLLKLYT*GPVYLL
Trigger: GAGAAGGTACACTGGTCCCAAGGTGTAAAGCTTTAA...GAGCCCCGAGGGAACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR CAA 90 bp CTAGATGGGCATGTATGGCAGCTACAGCTTGTGAGTGACCCCCTTCCCCAGAGTGGCCCGGACAGCTTCTaGATCGCCGCGCCGTTGGCG +
Preference number: 5 (lower is better)
Translates to: LDGHVWQLQLVSDPLPQSGPDSF*IAAPLA
Trigger: CGCCAACGGCGCGGCGATCAAGAAGCTGTCCGGGCC...ACTCTGGGGAAGGGGGTCACTCACAAGCTGTAGCTGCCATACATGCCCATCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
CDS-3UTR CAA 90 bp TGCAAGCTAGATGGGCATGTATGGCAGCTACAGCTTGTGAGTGACCCCCTTCCCGCTCACCGCAGCCTCTaGCGCGGGGTCTGCTCCACC +
Preference number: 5 (lower is better)
Translates to: CKLDGHVWQLQLVSDPLPAHRSL*RGVCST
Trigger: GGTGGAGCAGACCCCGCGCAAGAGGCTGCGGTGAGC...GGGAAGGGGGTCACTCACAAGCTGTAGCTGCCATACATGCCCATCTAGCTTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CAA 90 bp GAACGGTCCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTTAAAGCTTTACACCTaGGGACCAGTGTACCTTCTC +
Preference number: 5 (lower is better)
Translates to: ERSQPRPSALPTSAAPAGLKLYT*GPVYLL
Trigger: GAGAAGGTACACTGGTCCCAAGGTGTAAAGCTTTAA...ACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGGACCGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR CAA 90 bp TTAGAACCCGGCGGACGAGGGGCCGGGGCAGTGGTACAGACGGCTCAGGAACCAGCTGATCTCTTGCGCTaGGCGAAGAAATCGGAGATC +
Preference number: 5 (lower is better)
Translates to: LEPGGRGAGAVVQTAQEPADLLR*AKKSEI
Trigger: GATCTCCGATTTCTTCGCCAAGCGCAAGAGATCAGC...TGGTTCCTGAGCCGTCTGTACCACTGCCCCGGCCCCTCGTCCGCCGGGTTCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
CDS-3UTR CAA 90 bp GCGCGAAGAGACTGCAAGCTAGATGGGCATGTATGGCAGCTACAGCTTGTGAGTGCTCACCGCAGCCTCTaGCGCGGGGTCTGCTCCACC +
Preference number: 5 (lower is better)
Translates to: ARRDCKLDGHVWQLQLVSAHRSL*RGVCST
Trigger: GGTGGAGCAGACCCCGCGCAAGAGGCTGCGGTGAGC...ACTCACAAGCTGTAGCTGCCATACATGCCCATCTAGCTTGCAGTCTCTTCGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CAA 90 bp AAGCTAGATGGGCATGTATGGCAGCTACAGCTTGTGAGTGACCCCCTTCCCCAGGGCAGCCGCCGCCGGTaGCTGCTACATGAACGGTCC +
Preference number: 5 (lower is better)
Translates to: KLDGHVWQLQLVSDPLPQGSRRR*LLHERS
Trigger: GGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCC...CTGGGGAAGGGGGTCACTCACAAGCTGTAGCTGCCATACATGCCCATCTAGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CAA 90 bp AACGGTCCCAGCCGAGGCCCAGCGCCCTTCCAACGTCCGCTGCCCCGGCAGGTTTTAAAGCTTTACACCTaGGGACCAGTGTACCTTCTC +
Preference number: 5 (lower is better)
Translates to: NGPSRGPAPFQRPLPRQVLKLYT*GPVYLL
Trigger: GAGAAGGTACACTGGTCCCAAGGTGTAAAGCTTTAA...AACCTGCCGGGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGGACCGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
CDS-3UTR CAA 90 bp AGTGCCTTTGGCATAACCAATAACCGAGCTAGTGCGTGGCAGAGCGGTCCACGCGGGGCTCTTTGGGCTTaGGCTCACCGCAGCCTCTTG +
Preference number: 5 (lower is better)
Translates to: SAFGITNNRASAWQSGPRGALWA*AHRSLL
Trigger: CAAGAGGCTGCGGTGAGCCAAAGCCCAAAGAGCCCC...GCGTGGACCGCTCTGCCACGCACTAGCTCGGTTATTGGTTATGCCAAAGGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414822.8
CDS-3UTR CAA 90 bp GAAAGCGCGAAGAGACTGCAAGCTAGATGGGCATGTATGGCAGCTACAGCTTGTGGCAGCCGCCGCCGGTaGCTGCTACATGAACGGTCC +
Preference number: 5 (lower is better)
Translates to: ESAKRLQARWACMAATACGSRRR*LLHERS
Trigger: GGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCC...ACAAGCTGTAGCTGCCATACATGCCCATCTAGCTTGCAGTCTCTTCGCGCTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CAA 90 bp GGGCATGTATGGCAGCTACAGCTTGTGAGTGACCCCCTTCCCCAGAGTCCGCGATCTTTGGGCTCTAAATaGGCTCACCGCAGCCTCTTG +
Preference number: 5 (lower is better)
Translates to: GHVWQLQLVSDPLPQSPRSLGSK*AHRSLL
Trigger: CAAGAGGCTGCGGTGAGCCAATTTAGAGCCCAAAGA...TCGCGGACTCTGGGGAAGGGGGTCACTCACAAGCTGTAGCTGCCATACATGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CAA 90 bp AACAAAACCGAACGCTGCTCTGCGGCAGCCGCCGCCGGTTGCTGCTACATGAACTCTTTGGGCTCTAAATaGGCTCACCGCAGCCTCTTG +
Preference number: 5 (lower is better)
Translates to: NKTERCSAAAAAGCCYMNSLGSK*AHRSLL
Trigger: CAAGAGGCTGCGGTGAGCCAATTTAGAGCCCAAAGA...GTTCATGTAGCAGCAACCGGCGGCGGCTGCCGCAGAGCAGCGTTCGGTTTTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CAA 90 bp AGTGCGTGGCAGAGCGGTCCACGCCTGGACATAAATAGAAAATATAAGTTAGTAGCTCACCGCAGCCTCTaGCGCGGGGTCTGCTCCACC +
Preference number: 5 (lower is better)
Translates to: SAWQSGPRLDINRKYKLVAHRSL*RGVCST
Trigger: GGTGGAGCAGACCCCGCGCAAGAGGCTGCGGTGAGC...TACTAACTTATATTTTCTATTTATGTCCAGGCGTGGACCGCTCTGCCACGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CAA 90 bp CTAGATGGGCATGTATGGCAGCTACAGCTTGTGAGTGACCCCCTTCCCCAGAGTTTCCCTCGGGGCTCTTaGGGCTCTAAATTGGCTCAC +
Preference number: 5 (lower is better)
Translates to: LDGHVWQLQLVSDPLPQSFPRGS*GSKLAH
Trigger: GTGAGCCAATTTAGAGCCCAAAGAGCCCCGAGGGAA...ACTCTGGGGAAGGGGGTCACTCACAAGCTGTAGCTGCCATACATGCCCATCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CAA 90 bp GCGCGAAGAGACTGCAAGCTAGATGGGCATGTATGGCAGCTACAGCTTGTGAGTTCAGGCGCTGATCTCTaGCGCTTGGCGAAGAAATCG +
Preference number: 5 (lower is better)
Translates to: ARRDCKLDGHVWQLQLVSSGADL*RLAKKS
Trigger: CGATTTCTTCGCCAAGCGCAAGAGATCAGCGCCTGA...ACTCACAAGCTGTAGCTGCCATACATGCCCATCTAGCTTGCAGTCTCTTCGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
CDS-3UTR CAA 90 bp ACAGCGAAAGCGCGAAGAGACTGCAAGCTAGATGGGCATGTATGGCAGCTACAGTCAGGCGCTGATCTCTaGCGCTTGGCGAAGAAATCG +
Preference number: 5 (lower is better)
Translates to: TAKARRDCKLDGHVWQLQSGADL*RLAKKS
Trigger: CGATTTCTTCGCCAAGCGCAAGAGATCAGCGCCTGA...CTGTAGCTGCCATACATGCCCATCTAGCTTGCAGTCTCTTCGCGCTTTCGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
CDS-3UTR CAA 90 bp ACAGCGAAAGCGCGAAGAGACTGCAAGCTAGATGGGCATGTATGGCAGCTACAGTTCCCTCGGGGCTCTTaGGGCTCTAAATTGGCTCAC +
Preference number: 5 (lower is better)
Translates to: TAKARRDCKLDGHVWQLQFPRGS*GSKLAH
Trigger: GTGAGCCAATTTAGAGCCCAAAGAGCCCCGAGGGAA...CTGTAGCTGCCATACATGCCCATCTAGCTTGCAGTCTCTTCGCGCTTTCGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CAA 90 bp GCGATGAAAATAAAGTTACACTTGTCAATAACCAGATGTGGGAGATGGAGAGTGGCTCACCGCAGCCTCTaGCGCGGGGTCTGCTCCACC +
Preference number: 5 (lower is better)
Translates to: AMKIKLHLSITRCGRWRVAHRSL*RGVCST
Trigger: GGTGGAGCAGACCCCGCGCAAGAGGCTGCGGTGAGC...CACTCTCCATCTCCCACATCTGGTTATTGACAAGTGTAACTTTATTTTCATCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CAA 90 bp CCTTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATATAAAAAGACGTGCTCACCGCAGCCTCTaGCGCGGGGTCTGCTCCACC +
Preference number: 5 (lower is better)
Translates to: PWDQCTFSCRIHLDIKRRAHRSL*RGVCST
Trigger: GGTGGAGCAGACCCCGCGCAAGAGGCTGCGGTGAGC...ACGTCTTTTTATATCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
ENST00000647251.1
CDS-3UTR CAA 90 bp ACAGCGAAAGCGCGAAGAGACTGCAAGCTAGATGGGCATGTATGGCAGCTACAGTCAGGCGCTGATCTCTaGCGCTTGGCGAAGAAATCT +
Preference number: 5 (lower is better)
Translates to: TAKARRDCKLDGHVWQLQSGADL*RLAKKS
Trigger: AGATTTCTTCGCCAAGCGCAAGAGATCAGCGCCTGA...CTGTAGCTGCCATACATGCCCATCTAGCTTGCAGTCTCTTCGCGCTTTCGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380725.2
ENST00000631604.1
CDS-3UTR CAA 90 bp CCTTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATATAAAAAGACGTGGCAGCCGCCGCCGGTaGCTGCTACATGAACGGTCC +
Preference number: 5 (lower is better)
Translates to: PWDQCTFSCRIHLDIKRRGSRRR*LLHERS
Trigger: GGACCGTTCATGTAGCAGCAACCGGCGGCGGCTGCC...ACGTCTTTTTATATCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
ENST00000647251.1
CDS-3UTR CAA 90 bp TGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATATAAAAAGACGTTATGCTCACCGCAGCCTCTaGCGCGGGGTCTGCTCCACC +
Preference number: 5 (lower is better)
Translates to: WDQCTFSCRIHLDIKRRYAHRSL*RGVCST
Trigger: GGTGGAGCAGACCCCGCGCAAGAGGCTGCGGTGAGC...ATAACGTCTTTTTATATCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
ENST00000647251.1
CDS-3UTR CAA 90 bp GGGCCGGGGCAGTGGTACAGACGGCTCAGGAACCATTTTAACAGACTTGTCTTCTTAAAGCTTTACACCTaGGGACCAGTGTACCTTCTC +
Preference number: 5 (lower is better)
Translates to: GPGQWYRRLRNHFNRLVFLKLYT*GPVYLL
Trigger: GAGAAGGTACACTGGTCCCAAGGTGTAAAGCTTTAA...GAAGACAAGTCTGTTAAAATGGTTCCTGAGCCGTCTGTACCACTGCCCCGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CAA 90 bp CTCTTAAAGCTTTACACCTTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTGGGGCTCTTTGGGCTTaGGCTCACCGCAGCCTCTTG +
Preference number: 5 (lower is better)
Translates to: LLKLYTLGPVYLLVQNTFGALWA*AHRSLL
Trigger: CAAGAGGCTGCGGTGAGCCAAAGCCCAAAGAGCCCC...AAATGTATTCTGCACGAGAAGGTACACTGGTCCCAAGGTGTAAAGCTTTAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414822.8
ENST00000633020.1
ENST00000647251.1
CDS-3UTR CAA 90 bp CCTTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATATAAAAAGACGTTTCCCTCGGGGCTCTTaGGGCTTTGGCTCACCGCAG +
Preference number: 5 (lower is better)
Translates to: PWDQCTFSCRIHLDIKRRFPRGS*GFGSPQ
Trigger: CTGCGGTGAGCCAAAGCCCAAAGAGCCCCGAGGGAA...ACGTCTTTTTATATCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414822.8
ENST00000633020.1
ENST00000647251.1
CDS-3UTR CAA 90 bp GAAAGCGCGAAGAGACTGCAAGCTAGATGGGCATGTATGGCAGCTACAGCTTGTTTAAAGCTTTACACCTaGGGACCAGTGTACCTTCTC +
Preference number: 5 (lower is better)
Translates to: ESAKRLQARWACMAATACLKLYT*GPVYLL
Trigger: GAGAAGGTACACTGGTCCCAAGGTGTAAAGCTTTAA...ACAAGCTGTAGCTGCCATACATGCCCATCTAGCTTGCAGTCTCTTCGCGCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CAA 90 bp AGTGCGTGGCAGAGCGGTCCACGCCTGGACATAAATAGAAAATATAAGTTAGTAGCTGATCTCTTGCGCTaGGCGAAGAAATCGGAGATC +
Preference number: 5 (lower is better)
Translates to: SAWQSGPRLDINRKYKLVADLLR*AKKSEI
Trigger: GATCTCCGATTTCTTCGCCAAGCGCAAGAGATCAGC...TACTAACTTATATTTTCTATTTATGTCCAGGCGTGGACCGCTCTGCCACGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
CDS-3UTR CAA 90 bp TTAAAGCTTTACACCTTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATCAGGCGCTGATCTCTaGCGCTTGGCGAAGAAATCG +
Preference number: 5 (lower is better)
Translates to: LKLYTLGPVYLLVQNTFRSGADL*RLAKKS
Trigger: CGATTTCTTCGCCAAGCGCAAGAGATCAGCGCCTGA...TCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCAAGGTGTAAAGCTTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000633020.1
CDS-3UTR CAA 90 bp CTCTTAAAGCTTTACACCTTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTTCTTTGGGCTCTAAATaGGCTCACCGCAGCCTCTTG +
Preference number: 5 (lower is better)
Translates to: LLKLYTLGPVYLLVQNTFSLGSK*AHRSLL
Trigger: CAAGAGGCTGCGGTGAGCCAATTTAGAGCCCAAAGA...AAATGTATTCTGCACGAGAAGGTACACTGGTCCCAAGGTGTAAAGCTTTAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CAA 90 bp TTAAAGCTTTACACCTTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGAGCTGATCTCTTGCGCTaGGCGAAGAAATCTGCACCG +
Preference number: 5 (lower is better)
Translates to: LKLYTLGPVYLLVQNTFRADLLR*AKKSAP
Trigger: CGGTGCAGATTTCTTCGCCAAGCGCAAGAGATCAGC...TCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCAAGGTGTAAAGCTTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380725.2
ENST00000631604.1
ENST00000647251.1
CDS-3UTR CAA 90 bp ATGAAAATAAAGTTACACTTGTCAATAACCAGATGTGGGAGATGGAGAGTGCCTTTCCCTCGGGGCTCTTaGGGCTCTAAATTGGCTCAC +
Preference number: 5 (lower is better)
Translates to: MKIKLHLSITRCGRWRVPFPRGS*GSKLAH
Trigger: GTGAGCCAATTTAGAGCCCAAAGAGCCCCGAGGGAA...AGGCACTCTCCATCTCCCACATCTGGTTATTGACAAGTGTAACTTTATTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CAA 90 bp TTTACACCTTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATATAAAATCAGGCGCTGATCTCTaGCGCTTGGCGAAGAAATCG +
Preference number: 5 (lower is better)
Translates to: FTPWDQCTFSCRIHLDIKSGADL*RLAKKS
Trigger: CGATTTCTTCGCCAAGCGCAAGAGATCAGCGCCTGA...TTTTATATCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCAAGGTGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000633020.1
CDS-3UTR CAA 90 bp TTTACACCTTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATATAAAATTCCCTCGGGGCTCTTaGGGCTCTAAATTGGCTCAC +
Preference number: 5 (lower is better)
Translates to: FTPWDQCTFSCRIHLDIKFPRGS*GSKLAH
Trigger: GTGAGCCAATTTAGAGCCCAAAGAGCCCCGAGGGAA...TTTTATATCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCAAGGTGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
CDS-3UTR CAA 90 bp ACACCTTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATATAAAAAGATCAGGCGCTGATCTCTaGCGCTTGGCGAAGAAATCT +
Preference number: 5 (lower is better)
Translates to: TPWDQCTFSCRIHLDIKRSGADL*RLAKKS
Trigger: AGATTTCTTCGCCAAGCGCAAGAGATCAGCGCCTGA...TCTTTTTATATCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCAAGGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000380725.2
ENST00000631604.1
ENST00000647251.1
CDS-3UTR CAA 90 bp TTTACACCTTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATATAAAAGCTGATCTCTTGCGCTaGGCGAAGAAATCGGAGATC +
Preference number: 5 (lower is better)
Translates to: FTPWDQCTFSCRIHLDIKADLLR*AKKSEI
Trigger: GATCTCCGATTTCTTCGCCAAGCGCAAGAGATCAGC...TTTTATATCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCAAGGTGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000633020.1
CDS-3UTR CAA 90 bp CTCTTAAAGCTTTACACCTTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTTTAAAGCTTTACACCTaGGGACCAGTGTACCTTCTC +
Preference number: 5 (lower is better)
Translates to: LLKLYTLGPVYLLVQNTFLKLYT*GPVYLL
Trigger: GAGAAGGTACACTGGTCCCAAGGTGTAAAGCTTTAA...AAATGTATTCTGCACGAGAAGGTACACTGGTCCCAAGGTGTAAAGCTTTAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
ENST00000647251.1
CDS-3UTR CAA 90 bp CCTTGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATATAAAAAGACGTTTAAAGCTTTACACCTaGGGACCAGTGTACCTTCTC +
Preference number: 5 (lower is better)
Translates to: PWDQCTFSCRIHLDIKRRLKLYT*GPVYLL
Trigger: GAGAAGGTACACTGGTCCCAAGGTGTAAAGCTTTAA...ACGTCTTTTTATATCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
ENST00000647251.1
CDS-3UTR CAA 90 bp TGGGACCAGTGTACCTTCTCGTGCAGAATACATTTAGATATAAAAAGACGTTATTTAAAGCTTTACACCTaGGGACCAGTGTACCTTCTC +
Preference number: 5 (lower is better)
Translates to: WDQCTFSCRIHLDIKRRYLKLYT*GPVYLL
Trigger: GAGAAGGTACACTGGTCCCAAGGTGTAAAGCTTTAA...ATAACGTCTTTTTATATCTAAATGTATTCTGCACGAGAAGGTACACTGGTCCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
ENST00000647251.1
CDS GCA 72 bp GCGCAAGGGAGACCCCGCGCCGCCCGACTCTGCGTGTaGGAGGGACGCGGCGGCTACCTGGCTGTCCGGTGG +
Preference number: 6 (lower is better)
Translates to: AQGRPRAARLCV*EGRGGYLAVRW
Trigger: CCACCGGACAGCCAGGTAGCCGCCGCGTCCCTCGCACACGCAGAGTCGGGCGGCGCGGGGTCTCCCTTGCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414822.8
ENST00000430149.3
ENST00000616138.2
ENST00000633020.1
CDS CCA 72 bp TCGTCCGGACGGCAGCCGCGCCCCCTCGATGCCTGCTaGCTAGCTCGCTCGCTCAGGCCTGGCCGGCACCCC +
Preference number: 6 (lower is better)
Translates to: SSGRQPRPLDAC*LARSLRPGRHP
Trigger: GGGGTGCCGGCCAGGCCTGAGCGAGCGAGCTAGCCAGCAGGCATCGAGGGGGCGCGGCTGCCGTCCGGACGA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
ENST00000681969.1
CDS GCA 72 bp GTCTCGTCCGGACGGCAGCCGCGCCCCCTCGATGCCTaGTGGCTAGCTCGCTCGCTCAGGCCTGGCCGGCAC +
Preference number: 6 (lower is better)
Translates to: VSSGRQPRPLDA*WLARSLRPGRH
Trigger: GTGCCGGCCAGGCCTGAGCGAGCGAGCTAGCCAGCAGGCATCGAGGGGGCGCGGCTGCCGTCCGGACGAGAC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
ENST00000681969.1
CDS GCA 72 bp GCCTGTCTCGTCCGGACGGCAGCCGCGCCCCCTCGATaGCTGCTGGCTAGCTCGCTCGCTCAGGCCTGGCCG +
Preference number: 6 (lower is better)
Translates to: ACLVRTAAAPPR*LLASSLAQAWP
Trigger: CGGCCAGGCCTGAGCGAGCGAGCTAGCCAGCAGGCATCGAGGGGGCGCGGCTGCCGTCCGGACGAGACAGGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
ENST00000681969.1
CDS GCA 72 bp GCGGTGCCGGCCGCGGGACGTCCCGAAATCCCCGAGTaGAGCTGGTCAGCGAGAGGCTCCTGGCCGCGCTGC +
Preference number: 6 (lower is better)
Translates to: AVPAAGRPEIPE*SWSARGSWPRC
Trigger: GCAGCGCGGCCAGGAGCCTCTCGCTGACCAGCTGCACTCGGGGATTTCGGGACGTCCCGCGGCCGGCACCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000633020.1
CDS CCA 72 bp TCAGGCCTGGCCGGCACCCCTCGAGCACAGCGCACTTaGCCTGTGGAACGCCCAGCCCGCCTGCGCCCCCTT +
Preference number: 6 (lower is better)
Translates to: SGLAGTPRAQRT*PVERPARLRPL
Trigger: AAGGGGGCGCAGGCGGGCTGGGCGTTCCACAGGCCAAGTGCGCTGTGCTCGAGGGGTGCCGGCCAGGCCTGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313407.10
ENST00000616138.2
CDS GCA 72 bp TTCTGGTCCTCGGCGTTCAGCTCGGCCAGGCGGGCCTaGAGCTCGCGGCTCAGCTCCTCGTGGTCCACCGGC +
Preference number: 6 (lower is better)
Translates to: FWSSAFSSARRA*SSRLSSSWSTG
Trigger: GCCGGTGGACCACGAGGAGCTGAGCCGCGAGCTGCAGGCCCGCCTGGCCGAGCTGAACGCCGAGGACCAGAA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
ENST00000647251.1
CDS GCA 72 bp GTGCTGCGGAGGGACGCGTCGGACATGGCCCGGGGCTaGGCAAACGCGGGCAGCGAGAGAGGAGAGGACAGC +
Preference number: 6 (lower is better)
Translates to: VLRRDASDMARG*ANAGSERGEDS
Trigger: GCTGTCCTCTCCTCTCTCGCTGCCCGCGTTTGCGCAGCCCCGGGCCATGTCCGACGCGTCCCTCCGCAGCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414822.8
ENST00000430149.3
ENST00000616138.2
ENST00000633020.1
CDS GCA 72 bp AACGCGGGCACCGAGTCGCTGTCCACTTCGGTCCACTaGAGGCGTCCAGGGCCCCGCAGCGGCATGTCCTGC +
Preference number: 6 (lower is better)
Translates to: NAGTESLSTSVH*RRPGPRSGMSC
Trigger: GCAGGACATGCCGCTGCGGGGCCCTGGACGCCTGCAGTGGACCGAAGTGGACAGCGACTCGGTGCCCGCGTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
ENST00000647251.1
CDS GCA 72 bp GCGGCGGCTACCTGGCTGTCCGGTGGTGGACTCTTCTaGGTCGGGTTCGCCTGTCTCGTCCGGACGGCAGCC +
Preference number: 6 (lower is better)
Translates to: AAATWLSGGGLF*VGFACLVRTAA
Trigger: GGCTGCCGTCCGGACGAGACAGGCGAACCCGACGCAGAAGAGTCCACCACCGGACAGCCAGGTAGCCGCCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414822.8
ENST00000430149.3
ENST00000616138.2
ENST00000633020.1
CDS GCA 72 bp TCCCACGGGCGACAAGACGCTCCATCGTGGATGTGCTaGGGAGGGACGCGTCGGACATGGCCCGGGGCTGCG +
Preference number: 6 (lower is better)
Translates to: SHGRQDAPSWMC*GGTRRTWPGAA
Trigger: CGCAGCCCCGGGCCATGTCCGACGCGTCCCTCCGCAGCACATCCACGATGGAGCGTCTTGTCGCCCGTGGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414822.8
ENST00000430149.3
ENST00000616138.2
ENST00000633020.1
CDS CCA 72 bp TGGCCGGCACCCCTCGAGCACAGCGCACTTGGCCTGTaGAACGCCCAGCCCGCCTGCGCCCCCTTTATACGC +
Preference number: 6 (lower is better)
Translates to: WPAPLEHSALGL*NAQPACAPFIR
Trigger: GCGTATAAAGGGGGCGCAGGCGGGCTGGGCGTTCCACAGGCCAAGTGCGCTGTGCTCGAGGGGTGCCGGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313407.10
ENST00000616138.2
CDS CCA 72 bp CCATCGTGGATGTGCTGCGGAGGGACGCGTCGGACATaGCCCGGGGCTGCGCAAACGCGGGCAGCGAGAGAG +
Preference number: 6 (lower is better)
Translates to: PSWMCCGGTRRT*PGAAQTRAARE
Trigger: CTCTCTCGCTGCCCGCGTTTGCGCAGCCCCGGGCCATGTCCGACGCGTCCCTCCGCAGCACATCCACGATGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414822.8
ENST00000430149.3
ENST00000616138.2
ENST00000633020.1
CDS CAA 90 bp AAATCGGAGATCAGAGGCCCGGACAGCTTCTTGATCGCCGCGCCGTaGGCGCTGGCGGCCGCGGTGCCGGCCGCGGGACGTCCCGAAATC +
Preference number: 6 (lower is better)
Translates to: KSEIRGPDSFLIAAP*ALAAAVPAAGRPEI
Trigger: GATTTCGGGACGTCCCGCGGCCGGCACCGCGGCCGCCAGCGCCAACGGCGCGGCGATCAAGAAGCTGTCCGGGCCTCTGATCTCCGATTT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000633020.1
CDS CAA 90 bp TTGCGCTTGGCGAAGAAATCGGAGATCAGAGGCCCGGACAGCTTCTaGATCGCCGCGCCGTTGGCGCTGGCGGCCGCGGTGCCGGCCGCG +
Preference number: 6 (lower is better)
Translates to: LRLAKKSEIRGPDSF*IAAPLALAAAVPAA
Trigger: CGCGGCCGGCACCGCGGCCGCCAGCGCCAACGGCGCGGCGATCAAGAAGCTGTCCGGGCCTCTGATCTCCGATTTCTTCGCCAAGCGCAA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000633020.1
CDS CAA 90 bp CACGGCGCGGGGACATCGCCCGACGACTTCTCAGGCGCTGATCTCTaGCGCTTGGCGAAGAAATCTGCGGGCGACAGCGCGCGCGGCCGG +
Preference number: 6 (lower is better)
Translates to: HGAGTSPDDFSGADL*RLAKKSAGDSARGR
Trigger: CCGGCCGCGCGCGCTGTCGCCCGCAGATTTCTTCGCCAAGCGCAAGAGATCAGCGCCTGAGAAGTCGTCGGGCGATGTCCCCGCGCCGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471157.2
ENST00000631746.1
CDS CAA 90 bp GCGGGGACATCGCCCGACGACTTCTCAGGCGCTGATCTCTTGCGCTaGGCGAAGAAATCTGCGGGCGACAGCGCGCGCGGCCGGTCAGGG +
Preference number: 6 (lower is better)
Translates to: AGTSPDDFSGADLLR*AKKSAGDSARGRSG
Trigger: CCCTGACCGGCCGCGCGCGCTGTCGCCCGCAGATTTCTTCGCCAAGCGCAAGAGATCAGCGCCTGAGAAGTCGTCGGGCGATGTCCCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471157.2
ENST00000631746.1
CDS GCA 72 bp GGTCCACCGGCCCGAAGAGGCTGCGGCAGGCGCTGGTaGGCACTAGTACTGGGAAGGTCCCACGGGCGACAA +
Preference number: 6 (lower is better)
Translates to: GPPARRGCGRRW*ALVLGRSHGRQ
Trigger: TTGTCGCCCGTGGGACCTTCCCAGTACTAGTGCGCACCAGCGCCTGCCGCAGCCTCTTCGGGCCGGTGGACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000631604.1
ENST00000633020.1
ENST00000647251.1
CDS GCA 72 bp AGGTCCCACGGGCGACAAGACGCTCCATCGTGGATGTaGTGCGGAGGGACGCGTCGGACATGGCCCGGGGCT +
Preference number: 6 (lower is better)
Translates to: RSHGRQDAPSWM*CGGTRRTWPGA
Trigger: AGCCCCGGGCCATGTCCGACGCGTCCCTCCGCAGCACATCCACGATGGAGCGTCTTGTCGCCCGTGGGACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414822.8
ENST00000430149.3
ENST00000616138.2
ENST00000633020.1
CDS CCA 72 bp TGCGAGGGACGCGGCGGCTACCTGGCTGTCCGGTGGTaGACTCTTCTGCGTCGGGTTCGCCTGTCTCGTCCG +
Preference number: 6 (lower is better)
Translates to: CEGRGGYLAVRW*TLLRRVRLSRP
Trigger: CGGACGAGACAGGCGAACCCGACGCAGAAGAGTCCACCACCGGACAGCCAGGTAGCCGCCGCGTCCCTCGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414822.8
ENST00000430149.3
ENST00000616138.2
ENST00000633020.1
CDS CCA 72 bp CCCGACTCTGCGTGTGCGAGGGACGCGGCGGCTACCTaGCTGTCCGGTGGTGGACTCTTCTGCGTCGGGTTC +
Preference number: 6 (lower is better)
Translates to: PDSACARDAAAT*LSGGGLFCVGF
Trigger: GAACCCGACGCAGAAGAGTCCACCACCGGACAGCCAGGTAGCCGCCGCGTCCCTCGCACACGCAGAGTCGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414822.8
ENST00000430149.3
ENST00000616138.2
ENST00000633020.1
CDS TCA 72 bp CGAAGAAATCGGAGATCAGAGGCCCGGACAGCTTCTTaGTCGCCGCGCCGTTGGCGCTGGCGGCCGCGGTGC +
Preference number: 6 (lower is better)
Translates to: RRNRRSEARTAS*SPRRWRWRPRC
Trigger: GCACCGCGGCCGCCAGCGCCAACGGCGCGGCGATCAAGAAGCTGTCCGGGCCTCTGATCTCCGATTTCTTCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000633020.1
CDS GCA 72 bp TCTAAATTGGCTCACCGCAGCCTCTTGCGCGGGGTCTaGTCCACCGAGCCCACGCCAGGGGCGGCGCTTGGA +
Preference number: 6 (lower is better)
Translates to: SKLAHRSLLRGV*STEPTPGAALG
Trigger: TCCAAGCGCCGCCCCTGGCGTGGGCTCGGTGGAGCAGACCCCGCGCAAGAGGCTGCGGTGAGCCAATTTAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000430149.3
ENST00000440480.8
ENST00000471157.2
ENST00000616138.2
ENST00000631604.1
ENST00000631746.1
ENST00000681969.1
CDS CCA 72 bp GTGTGCGAGGGACGCGGCGGCTACCTGGCTGTCCGGTaGTGGACTCTTCTGCGTCGGGTTCGCCTGTCTCGT +
Preference number: 6 (lower is better)
Translates to: VCEGRGGYLAVR*WTLLRRVRLSR
Trigger: ACGAGACAGGCGAACCCGACGCAGAAGAGTCCACCACCGGACAGCCAGGTAGCCGCCGCGTCCCTCGCACAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414822.8
ENST00000430149.3
ENST00000616138.2
ENST00000633020.1
CDS CCA 72 bp CTGGGAAGGTCCCACGGGCGACAAGACGCTCCATCGTaGATGTGCTGCGGAGGGACGCGTCGGACATGGCCC +
Preference number: 6 (lower is better)
Translates to: LGRSHGRQDAPS*MCCGGTRRTWP
Trigger: GGGCCATGTCCGACGCGTCCCTCCGCAGCACATCCACGATGGAGCGTCTTGTCGCCCGTGGGACCTTCCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414822.8
ENST00000430149.3
ENST00000616138.2
ENST00000633020.1
CDS CCA 72 bp CGCCCGACGACTTCTCAGGCGCTGATCTCTTGCGCTTaGCGAAGAAATCTGCGGGCGACAGCGCGCGCGGCC +
Preference number: 6 (lower is better)
Translates to: RPTTSQALISCA*RRNLRATARAA
Trigger: GGCCGCGCGCGCTGTCGCCCGCAGATTTCTTCGCCAAGCGCAAGAGATCAGCGCCTGAGAAGTCGTCGGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471157.2
ENST00000631746.1
CDS CAA 72 bp GCGAAGAAATCGGAGATCAGAGGCCCGGACAGCTTCTaGATCGCCGCGCCGTTGGCGCTGGCGGCCGCGGTG +
Preference number: 6 (lower is better)
Translates to: AKKSEIRGPDSF*IAAPLALAAAV
Trigger: CACCGCGGCCGCCAGCGCCAACGGCGCGGCGATCAAGAAGCTGTCCGGGCCTCTGATCTCCGATTTCTTCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000633020.1
CDS GCA 72 bp TCGTGGATGTGCTGGCTGTCCGGTGGTGGACTCTTCTaGGTCGGGTTCGCCTGTCTCGTCCGGACGGCAGCC +
Preference number: 6 (lower is better)
Translates to: SWMCWLSGGGLF*VGFACLVRTAA
Trigger: GGCTGCCGTCCGGACGAGACAGGCGAACCCGACGCAGAAGAGTCCACCACCGGACAGCCAGCACATCCACGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000440480.8
ENST00000631604.1
ENST00000647251.1
CDS CAA 72 bp TCGCCCGACGACTTCTCAGGCGCTGATCTCTTGCGCTaGGCGAAGAAATCTGCGGGCGACAGCGCGCGCGGC +
Preference number: 6 (lower is better)
Translates to: SPDDFSGADLLR*AKKSAGDSARG
Trigger: GCCGCGCGCGCTGTCGCCCGCAGATTTCTTCGCCAAGCGCAAGAGATCAGCGCCTGAGAAGTCGTCGGGCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471157.2
ENST00000631746.1
CDS TCA 72 bp CGGCGCGGGGACATCGCCCGACGACTTCTCAGGCGCTaGTCTCTTGCGCTTGGCGAAGAAATCTGCGGGCGA +
Preference number: 6 (lower is better)
Translates to: RRGDIARRLLRR*SLALGEEICGR
Trigger: TCGCCCGCAGATTTCTTCGCCAAGCGCAAGAGATCAGCGCCTGAGAAGTCGTCGGGCGATGTCCCCGCGCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471157.2
ENST00000631746.1
CDS GCA 72 bp GGCGAAGAAATCTGGCTGTCCGGTGGTGGACTCTTCTaGGTCGGGTTCGCCTGTCTCGTCCGGACGGCAGCC +
Preference number: 6 (lower is better)
Translates to: GEEIWLSGGGLF*VGFACLVRTAA
Trigger: GGCTGCCGTCCGGACGAGACAGGCGAACCCGACGCAGAAGAGTCCACCACCGGACAGCCAGATTTCTTCGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681969.1
CDS CAA 72 bp AACGTCCGCTGCCCCGGCAGGTTCCCTCGGGGCTCTTaGGGCTCTAAATTGGCTCACCGCAGCCTCTTGCGC +
Preference number: 6 (lower is better)
Translates to: NVRCPGRFPRGS*GSKLAHRSLLR
Trigger: GCGCAAGAGGCTGCGGTGAGCCAATTTAGAGCCCAAAGAGCCCCGAGGGAACCTGCCGGGGCAGCGGACGTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000430149.3
ENST00000440480.8
ENST00000471157.2
ENST00000616138.2
ENST00000631604.1
ENST00000631746.1
ENST00000681969.1
CDS TCA 72 bp CGGCGCGGGGACATCGCCCGACGACTTCTCAGGCGCTaGTCTCTTGCGCTTGGCGAAGAAATCTGCACCGTC +
Preference number: 6 (lower is better)
Translates to: RRGDIARRLLRR*SLALGEEICTV
Trigger: GACGGTGCAGATTTCTTCGCCAAGCGCAAGAGATCAGCGCCTGAGAAGTCGTCGGGCGATGTCCCCGCGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380725.2
ENST00000631604.1
ENST00000647251.1
CDS TCA 72 bp CGGCGCGGGGACATCGCCCGACGACTTCTCAGGCGCTaGTCTCTTGCGCTTGGCGAAGAAATCTGGCTGTCC +
Preference number: 6 (lower is better)
Translates to: RRGDIARRLLRR*SLALGEEIWLS
Trigger: GGACAGCCAGATTTCTTCGCCAAGCGCAAGAGATCAGCGCCTGAGAAGTCGTCGGGCGATGTCCCCGCGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681969.1
CDS GCA 72 bp GGACATCGCCCGACGACTTCTCAGGCGCTGATCTCTTaGGCTTGGCGAAGAAATCTGCGGGCGACAGCGCGC +
Preference number: 6 (lower is better)
Translates to: GHRPTTSQALIS*AWRRNLRATAR
Trigger: GCGCGCTGTCGCCCGCAGATTTCTTCGCCAAGCGCAAGAGATCAGCGCCTGAGAAGTCGTCGGGCGATGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471157.2
ENST00000631746.1
CDS CCA 72 bp AGACGCTCCATCGTGGATGTGCTGGCTGTCCGGTGGTaGACTCTTCTGCGTCGGGTTCGCCTGTCTCGTCCG +
Preference number: 6 (lower is better)
Translates to: RRSIVDVLAVRW*TLLRRVRLSRP
Trigger: CGGACGAGACAGGCGAACCCGACGCAGAAGAGTCCACCACCGGACAGCCAGCACATCCACGATGGAGCGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313407.10
ENST00000380725.2
ENST00000440480.8
ENST00000631604.1
ENST00000647251.1
CDS CAA 72 bp GGGACATCGCCCGACGACTTCTCAGGCGCTGATCTCTaGCGCTTGGCGAAGAAATCTGCGGGCGACAGCGCG +
Preference number: 6 (lower is better)
Translates to: GTSPDDFSGADL*RLAKKSAGDSA
Trigger: CGCGCTGTCGCCCGCAGATTTCTTCGCCAAGCGCAAGAGATCAGCGCCTGAGAAGTCGTCGGGCGATGTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471157.2
ENST00000631746.1
CDS TCA 72 bp CGGCGCGGGGACATCGCCCGACGACTTCTCAGGCGCTaGTCTCTTGCGCTTGGCGAAGAAATCGGAGATCAG +
Preference number: 6 (lower is better)
Translates to: RRGDIARRLLRR*SLALGEEIGDQ
Trigger: CTGATCTCCGATTTCTTCGCCAAGCGCAAGAGATCAGCGCCTGAGAAGTCGTCGGGCGATGTCCCCGCGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000633020.1
CDS GCA 72 bp GGACATCGCCCGACGACTTCTCAGGCGCTGATCTCTTaGGCTTGGCGAAGAAATCGGAGATCAGAGGCCCGG +
Preference number: 6 (lower is better)
Translates to: GHRPTTSQALIS*AWRRNRRSEAR
Trigger: CCGGGCCTCTGATCTCCGATTTCTTCGCCAAGCGCAAGAGATCAGCGCCTGAGAAGTCGTCGGGCGATGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000633020.1
CDS GCA 72 bp GCGGCGGGTCAGCTTTGTTTACGTCGCCGCGCAATGTaGTGTGTAAGCATTTCCCCTTGTCCCGCGGCCAAG +
Preference number: 6 (lower is better)
Translates to: AAGQLCLRRRAM*CVSISPCPAAK
Trigger: CTTGGCCGCGGGACAAGGGGAAATGCTTACACAGCACATTGCGCGGCGACGTAAACAAAGCTGACCCGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471157.2
ENST00000631746.1
CDS GCA 72 bp GGACATCGCCCGACGACTTCTCAGGCGCTGATCTCTTaGGCTTGGCGAAGAAATCTGGCTGTCCGGTGGTGG +
Preference number: 6 (lower is better)
Translates to: GHRPTTSQALIS*AWRRNLAVRWW
Trigger: CCACCACCGGACAGCCAGATTTCTTCGCCAAGCGCAAGAGATCAGCGCCTGAGAAGTCGTCGGGCGATGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681969.1
CDS CCA 72 bp CGCCCGACGACTTCTCAGGCGCTGATCTCTTGCGCTTaGCGAAGAAATCGGAGATCAGAGGCCCGGACAGCT +
Preference number: 6 (lower is better)
Translates to: RPTTSQALISCA*RRNRRSEARTA
Trigger: AGCTGTCCGGGCCTCTGATCTCCGATTTCTTCGCCAAGCGCAAGAGATCAGCGCCTGAGAAGTCGTCGGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000633020.1
CDS CCA 72 bp CGCCCGACGACTTCTCAGGCGCTGATCTCTTGCGCTTaGCGAAGAAATCTGCACCGTCTCGCGGTAGAACGC +
Preference number: 6 (lower is better)
Translates to: RPTTSQALISCA*RRNLHRLAVER
Trigger: GCGTTCTACCGCGAGACGGTGCAGATTTCTTCGCCAAGCGCAAGAGATCAGCGCCTGAGAAGTCGTCGGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380725.2
ENST00000631604.1
ENST00000647251.1
CDS CCA 72 bp TCTTGCGCTTGGCGAAGAAATCTGGCTGTCCGGTGGTaGACTCTTCTGCGTCGGGTTCGCCTGTCTCGTCCG +
Preference number: 6 (lower is better)
Translates to: SCAWRRNLAVRW*TLLRRVRLSRP
Trigger: CGGACGAGACAGGCGAACCCGACGCAGAAGAGTCCACCACCGGACAGCCAGATTTCTTCGCCAAGCGCAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681969.1
CDS CAA 72 bp GGGACATCGCCCGACGACTTCTCAGGCGCTGATCTCTaGCGCTTGGCGAAGAAATCGGAGATCAGAGGCCCG +
Preference number: 6 (lower is better)
Translates to: GTSPDDFSGADL*RLAKKSEIRGP
Trigger: CGGGCCTCTGATCTCCGATTTCTTCGCCAAGCGCAAGAGATCAGCGCCTGAGAAGTCGTCGGGCGATGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313407.10
ENST00000414822.8
ENST00000430149.3
ENST00000440480.8
ENST00000616138.2
ENST00000633020.1
CDS CAA 72 bp GGGACATCGCCCGACGACTTCTCAGGCGCTGATCTCTaGCGCTTGGCGAAGAAATCTGCACCGTCTCGCGGT +
Preference number: 6 (lower is better)
Translates to: GTSPDDFSGADL*RLAKKSAPSRG
Trigger: ACCGCGAGACGGTGCAGATTTCTTCGCCAAGCGCAAGAGATCAGCGCCTGAGAAGTCGTCGGGCGATGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380725.2
ENST00000631604.1
ENST00000647251.1
CDS CAA 72 bp GGGACATCGCCCGACGACTTCTCAGGCGCTGATCTCTaGCGCTTGGCGAAGAAATCTGGCTGTCCGGTGGTG +
Preference number: 6 (lower is better)
Translates to: GTSPDDFSGADL*RLAKKSGCPVV
Trigger: CACCACCGGACAGCCAGATTTCTTCGCCAAGCGCAAGAGATCAGCGCCTGAGAAGTCGTCGGGCGATGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681969.1
CDS GCA 72 bp GGACATCGCCCGACGACTTCTCAGGCGCTGATCTCTTaGGCTTGGCGAAGAAATCTGCACCGTCTCGCGGTA +
Preference number: 6 (lower is better)
Translates to: GHRPTTSQALIS*AWRRNLHRLAV
Trigger: TACCGCGAGACGGTGCAGATTTCTTCGCCAAGCGCAAGAGATCAGCGCCTGAGAAGTCGTCGGGCGATGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380725.2
ENST00000631604.1
ENST00000647251.1
CDS CCA 72 bp CGCCCGACGACTTCTCAGGCGCTGATCTCTTGCGCTTaGCGAAGAAATCTGGCTGTCCGGTGGTGGACTCTT +
Preference number: 6 (lower is better)
Translates to: RPTTSQALISCA*RRNLAVRWWTL
Trigger: AAGAGTCCACCACCGGACAGCCAGATTTCTTCGCCAAGCGCAAGAGATCAGCGCCTGAGAAGTCGTCGGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681969.1
CDS CAA 72 bp TCGCCCGACGACTTCTCAGGCGCTGATCTCTTGCGCTaGGCGAAGAAATCTGCACCGTCTCGCGGTAGAACG +
Preference number: 6 (lower is better)
Translates to: SPDDFSGADLLR*AKKSAPSRGRT
Trigger: CGTTCTACCGCGAGACGGTGCAGATTTCTTCGCCAAGCGCAAGAGATCAGCGCCTGAGAAGTCGTCGGGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380725.2
ENST00000631604.1
ENST00000647251.1
CDS CAA 72 bp TCGCCCGACGACTTCTCAGGCGCTGATCTCTTGCGCTaGGCGAAGAAATCTGGCTGTCCGGTGGTGGACTCT +
Preference number: 6 (lower is better)
Translates to: SPDDFSGADLLR*AKKSGCPVVDS
Trigger: AGAGTCCACCACCGGACAGCCAGATTTCTTCGCCAAGCGCAAGAGATCAGCGCCTGAGAAGTCGTCGGGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681969.1