RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDKN1A (Homo sapiens)

Ensembl gene IDs: ENSG00000124762

Ensembl transcript IDs: ENST00000244741.10, ENST00000373711.3, ENST00000405375.5, ENST00000448526.6, ENST00000459970.1, ENST00000462537.3, ENST00000478800.1, ENST00000615513.4

Found 310 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGAAGGAGCCACACCCCTCCAGAGGGTACCACCCAGCGGACAAGTaGGGAGGAGGAAGTAGCTGGCATGAAGCCGGCCCACCCAACCTC +
Preference number: 1 (lower is better)
Translates to: GKEPHPSRGYHPADK*GGGSSWHEAGPPNL
Trigger: GAGGTTGGGTGGGCCGGCTTCATGCCAGCTACTTCCTCCTCCCCACTTGTCCGCTGGGTGGTACCCTCTGGAGGGGTGTGGCTCCTTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR CCA 90 bp TCCAGAGGGTACCACCCAGCGGACAAGTGGGGAGGAGGAAGTAGCTaGCATGAAGCCGGCCCACCCAACCTCCGGGAGAGAGGAAAAGGA +
Preference number: 1 (lower is better)
Translates to: SRGYHPADKWGGGSS*HEAGPPNLRERGKG
Trigger: TCCTTTTCCTCTCTCCCGGAGGTTGGGTGGGCCGGCTTCATGCCAGCTACTTCCTCCTCCCCACTTGTCCGCTGGGTGGTACCCTCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR TCA 90 bp GGCTCAACGTTAGTGCCAGGAAAGACAACTACTCCCAGCCCCATATaGGCCCACGTGGCATGCCCTGTCCATAGCCTCTACTGCCACCAT +
Preference number: 1 (lower is better)
Translates to: GSTLVPGKTTTPSPI*AHVACPVHSLYCHH
Trigger: ATGGTGGCAGTAGAGGCTATGGACAGGGCATGCCACGTGGGCTCATATGGGGCTGGGAGTAGTTGTCTTTCCTGGCACTAACGTTGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR CCA 90 bp TCGAGAGGTTTACAGTCTAGGTGGAGAAACGGGAACCAGGACACATaGGGAGCCGAGAGAAAACAGTCCAGGCCAGTATGTTACAGGAGC +
Preference number: 1 (lower is better)
Translates to: SRGLQSRWRNGNQDT*GAERKQSRPVCYRS
Trigger: GCTCCTGTAACATACTGGCCTGGACTGTTTTCTCTCGGCTCCCCATGTGTCCTGGTTCCCGTTTCTCCACCTAGACTGTAAACCTCTCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR-3UTR GCA 90 bp CACTCAAGGGGGCCTGTGCCACCACATGGGACCCTCACCCCCACAGCTAGAGGAGCAGGCGGGGTGGTCTaGTCCAGGACCCCACCTTCC +
Preference number: 2 (lower is better)
Translates to: HSRGPVPPHGTLTPTARGAGGVV*SRTPPS
Trigger: GGAAGGTGGGGTCCTGGAGCAGACCACCCCGCCTGC...TCCTCTAGCTGTGGGGGTGAGGGTCCCATGTGGTGGCACAGGCCCCCTTGAGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR-3UTR TCA 90 bp CACTCAAGGGGGCCTGTGCCACCACATGGGACCCTCACCCCCACAGCTAGAGGATGTAGAGCGGGCCTTTaGGGCCCTCGCGCTTCCAGG +
Preference number: 2 (lower is better)
Translates to: HSRGPVPPHGTLTPTARGCRAGL*GPRASR
Trigger: CCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACA...TCCTCTAGCTGTGGGGGTGAGGGTCCCATGTGGTGGCACAGGCCCCCTTGAGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR-3UTR GCA 90 bp CACTCAAGGGGGCCTGTGCCACCACATGGGACCCTCACCCCCACAGCTAGAGGATCGCGCTTCCAGGACTaGAGGCTTCCTGTGGGCGGA +
Preference number: 2 (lower is better)
Translates to: HSRGPVPPHGTLTPTARGSRFQD*RLPVGG
Trigger: TCCGCCCACAGGAAGCCTGCAGTCCTGGAAGCGCGA...TCCTCTAGCTGTGGGGGTGAGGGTCCCATGTGGTGGCACAGGCCCCCTTGAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR-3UTR GCA 90 bp AAGGACAAGGGGGAGGGACAGCAGCAGAGGGGAATTGCAGAGCCCAGCTGGAGAGCAGGCGGGGTGGTCTaGTCCAGGACCCCACCTTCC +
Preference number: 2 (lower is better)
Translates to: KDKGEGQQQRGIAEPSWRAGGVV*SRTPPS
Trigger: GGAAGGTGGGGTCCTGGAGCAGACCACCCCGCCTGC...TCTCCAGCTGGGCTCTGCAATTCCCCTCTGCTGCTGTCCCTCCCCCTTGTCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR-3UTR GCA 90 bp AAGGACAAGGGGGAGGGACAGCAGCAGAGGGGAATTGCAGAGCCCAGCTGGAGATCGCGCTTCCAGGACTaGAGGCTTCCTGTGGGCGGA +
Preference number: 2 (lower is better)
Translates to: KDKGEGQQQRGIAEPSWRSRFQD*RLPVGG
Trigger: TCCGCCCACAGGAAGCCTGCAGTCCTGGAAGCGCGA...TCTCCAGCTGGGCTCTGCAATTCCCCTCTGCTGCTGTCCCTCCCCCTTGTCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR-3UTR TCA 90 bp GGGTCAGACCCCAATACTCCAAGTACACTAAGCACTTCAGTGCCTCCAGGGGCTGGTCGCTGGACGATTTaGGGGGCCAGTGTCTCCCTC +
Preference number: 2 (lower is better)
Translates to: GSDPNTPSTLSTSVPPGAGRWTI*GASVSL
Trigger: GAGGGAGACACTGGCCCCTCAAATCGTCCAGCGACC...AGCCCCTGGAGGCACTGAAGTGCTTAGTGTACTTGGAGTATTGGGGTCTGACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR-3UTR GCA 90 bp GGGTCAGACCCCAATACTCCAAGTACACTAAGCACTTCAGTGCCTCCAGGGGCTTCGCGCTTCCAGGACTaGAGGCTTCCTGTGGGCGGA +
Preference number: 2 (lower is better)
Translates to: GSDPNTPSTLSTSVPPGASRFQD*RLPVGG
Trigger: TCCGCCCACAGGAAGCCTGCAGTCCTGGAAGCGCGA...AGCCCCTGGAGGCACTGAAGTGCTTAGTGTACTTGGAGTATTGGGGTCTGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR-3UTR GCA 90 bp GACACAGAACAGTACAGGGTGTGGTCCCTGCCCTCGAGAGGTTTACAGTCTAGGTCGCGCTTCCAGGACTaGAGGCTTCCTGTGGGCGGA +
Preference number: 2 (lower is better)
Translates to: DTEQYRVWSLPSRGLQSRSRFQD*RLPVGG
Trigger: TCCGCCCACAGGAAGCCTGCAGTCCTGGAAGCGCGA...CCTAGACTGTAAACCTCTCGAGGGCAGGGACCACACCCTGTACTGTTCTGTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR-3UTR GCA 90 bp AGGAGCTGGAAGGTGTTTGGGGTCAGACCCCAATACTCCAAGTACACTAAGCACGCAGGCGGGGTGGTCTaGTCCAGGACCCCACCTTCC +
Preference number: 2 (lower is better)
Translates to: RSWKVFGVRPQYSKYTKHAGGVV*SRTPPS
Trigger: GGAAGGTGGGGTCCTGGAGCAGACCACCCCGCCTGC...GTGCTTAGTGTACTTGGAGTATTGGGGTCTGACCCCAAACACCTTCCAGCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR-3UTR GCA 90 bp AAGACACAGAACAGTACAGGGTGTGGTCCCTGCCCTCGAGAGGTTTACAGTCTAGCAGGCGGGGTGGTCTaGTCCAGGACCCCACCTTCC +
Preference number: 2 (lower is better)
Translates to: KTQNSTGCGPCPREVYSLAGGVV*SRTPPS
Trigger: GGAAGGTGGGGTCCTGGAGCAGACCACCCCGCCTGC...TAGACTGTAAACCTCTCGAGGGCAGGGACCACACCCTGTACTGTTCTGTGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR-3UTR TCA 90 bp AGGAGCTGGAAGGTGTTTGGGGTCAGACCCCAATACTCCAAGTACACTAAGCACTGTAGAGCGGGCCTTTaGGGCCCTCGCGCTTCCAGG +
Preference number: 2 (lower is better)
Translates to: RSWKVFGVRPQYSKYTKHCRAGL*GPRASR
Trigger: CCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACA...GTGCTTAGTGTACTTGGAGTATTGGGGTCTGACCCCAAACACCTTCCAGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR-3UTR TCA 90 bp GGGTCAGACCCCAATACTCCAAGTACACTAAGCACTTCAGTGCCTCCAGGGGCTGAGGGATGGGGTGGATaGGGAAGGTCGCTGGACGAT +
Preference number: 2 (lower is better)
Translates to: GSDPNTPSTLSTSVPPGAEGWGG*GRSLDD
Trigger: ATCGTCCAGCGACCTTCCTCATCCACCCCATCCCTC...AGCCCCTGGAGGCACTGAAGTGCTTAGTGTACTTGGAGTATTGGGGTCTGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR-3UTR GCA 90 bp GACACAGAACAGTACAGGGTGTGGTCCCTGCCCTCGAGAGGTTTACAGTCTAGGACTCAAGGGGGCCTGTaGCACCACATGGGACCCTCA +
Preference number: 2 (lower is better)
Translates to: DTEQYRVWSLPSRGLQSRTQGGL*HHMGPS
Trigger: TGAGGGTCCCATGTGGTGGCACAGGCCCCCTTGAGT...CCTAGACTGTAAACCTCTCGAGGGCAGGGACCACACCCTGTACTGTTCTGTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR-3UTR CCA 90 bp CACTCAAGGGGGCCTGTGCCACCACATGGGACCCTCACCCCCACAGCTAGAGGAGAGAAAAAGGGTAGCTaGGGCTCCTCAAAAGGTACA +
Preference number: 2 (lower is better)
Translates to: HSRGPVPPHGTLTPTARGEKKGS*GSSKGT
Trigger: TGTACCTTTTGAGGAGCCCCAGCTACCCTTTTTCTC...TCCTCTAGCTGTGGGGGTGAGGGTCCCATGTGGTGGCACAGGCCCCCTTGAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR-3UTR TCA 90 bp TACAGGAGCTGGAAGGTGTTTGGGGTCAGACCCCAATACTCCAAGTACACTAAGTGTAGAGCGGGCCTTTaGGGCCCTCGCGCTTCCAGG +
Preference number: 2 (lower is better)
Translates to: YRSWKVFGVRPQYSKYTKCRAGL*GPRASR
Trigger: CCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACA...CTTAGTGTACTTGGAGTATTGGGGTCTGACCCCAAACACCTTCCAGCTCCTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR-3UTR TCA 90 bp AAGACACAGAACAGTACAGGGTGTGGTCCCTGCCCTCGAGAGGTTTACAGTCTAGATGCCCCCACTCGGTaGGGCCCCTTCAAAGTGCCA +
Preference number: 2 (lower is better)
Translates to: KTQNSTGCGPCPREVYSLDAPTR*GPFKVP
Trigger: TGGCACTTTGAAGGGGCCTCACCGAGTGGGGGCATC...TAGACTGTAAACCTCTCGAGGGCAGGGACCACACCCTGTACTGTTCTGTGTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR-3UTR TCA 90 bp AGGAGCTGGAAGGTGTTTGGGGTCAGACCCCAATACTCCAAGTACACTAAGCACGATGCCCCCACTCGGTaGGGCCCCTTCAAAGTGCCA +
Preference number: 2 (lower is better)
Translates to: RSWKVFGVRPQYSKYTKHDAPTR*GPFKVP
Trigger: TGGCACTTTGAAGGGGCCTCACCGAGTGGGGGCATC...GTGCTTAGTGTACTTGGAGTATTGGGGTCTGACCCCAAACACCTTCCAGCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR-3UTR TCA 90 bp GGGTCAGACCCCAATACTCCAAGTACACTAAGCACTTCAGTGCCTCCAGGGGCTGAAAAGGCTCAACACTaGGACGGGCTCCCCAGTGCA +
Preference number: 2 (lower is better)
Translates to: GSDPNTPSTLSTSVPPGAEKAQH*DGLPSA
Trigger: TGCACTGGGGAGCCCGTCTCAGTGTTGAGCCTTTTC...AGCCCCTGGAGGCACTGAAGTGCTTAGTGTACTTGGAGTATTGGGGTCTGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR-3UTR TCA 90 bp AGGAGCTGGAAGGTGTTTGGGGTCAGACCCCAATACTCCAAGTACACTAAGCACGGTCGCTGGACGATTTaGGGGGCCAGTGTCTCCCTC +
Preference number: 2 (lower is better)
Translates to: RSWKVFGVRPQYSKYTKHGRWTI*GASVSL
Trigger: GAGGGAGACACTGGCCCCTCAAATCGTCCAGCGACC...GTGCTTAGTGTACTTGGAGTATTGGGGTCTGACCCCAAACACCTTCCAGCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR-3UTR CCA 90 bp CAGTGCCTCCAGGGGCTCAACGTTAGTGCCAGGAAAGACAACTACTCCCAGCCCATTGCAGAGCCCAGCTaGAGAAAAAGGGTAGCTGGG +
Preference number: 2 (lower is better)
Translates to: QCLQGLNVSARKDNYSQPIAEPS*RKRVAG
Trigger: CCCAGCTACCCTTTTTCTCCAGCTGGGCTCTGCAAT...GGGCTGGGAGTAGTTGTCTTTCCTGGCACTAACGTTGAGCCCCTGGAGGCACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR-3UTR CCA 90 bp CAGTGCCTCCAGGGGCTCAACGTTAGTGCCAGGAAAGACAACTACTCCCAGCCCCAAAGTGCAATGAACTaGGGAGGGATGGGGTGGATG +
Preference number: 2 (lower is better)
Translates to: QCLQGLNVSARKDNYSQPQSAMN*GGMGWM
Trigger: CATCCACCCCATCCCTCCCCAGTTCATTGCACTTTG...GGGCTGGGAGTAGTTGTCTTTCCTGGCACTAACGTTGAGCCCCTGGAGGCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR-3UTR CCA 90 bp GGGTCAGACCCCAATACTCCAAGTACACTAAGCACTTCAGTGCCTCCAGGGGCTCCATATGAGCCCACGTaGCATGCCCTGTCCATAGCC +
Preference number: 2 (lower is better)
Translates to: GSDPNTPSTLSTSVPPGAPYEPT*HALSIA
Trigger: GGCTATGGACAGGGCATGCCACGTGGGCTCATATGG...AGCCCCTGGAGGCACTGAAGTGCTTAGTGTACTTGGAGTATTGGGGTCTGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR-3UTR TCA 90 bp GACACAGAACAGTACAGGGTGTGGTCCCTGCCCTCGAGAGGTTTACAGTCTAGGTTTCATAACCGCCTGTaGCAGCGATGGGAAGGAGCC +
Preference number: 2 (lower is better)
Translates to: DTEQYRVWSLPSRGLQSRFHNRL*QRWEGA
Trigger: GGCTCCTTCCCATCGCTGTCACAGGCGGTTATGAAA...CCTAGACTGTAAACCTCTCGAGGGCAGGGACCACACCCTGTACTGTTCTGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR-3UTR TCA 90 bp GGGTCAGACCCCAATACTCCAAGTACACTAAGCACTTCAGTGCCTCCAGGGGCTTTTCATAACCGCCTGTaGCAGCGATGGGAAGGAGCC +
Preference number: 2 (lower is better)
Translates to: GSDPNTPSTLSTSVPPGAFHNRL*QRWEGA
Trigger: GGCTCCTTCCCATCGCTGTCACAGGCGGTTATGAAA...AGCCCCTGGAGGCACTGAAGTGCTTAGTGTACTTGGAGTATTGGGGTCTGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR-3UTR TCA 90 bp TACAGGAGCTGGAAGGTGTTTGGGGTCAGACCCCAATACTCCAAGTACACTAAGGGTCGCTGGACGATTTaGGGGGCCAGTGTCTCCCTC +
Preference number: 2 (lower is better)
Translates to: YRSWKVFGVRPQYSKYTKGRWTI*GASVSL
Trigger: GAGGGAGACACTGGCCCCTCAAATCGTCCAGCGACC...CTTAGTGTACTTGGAGTATTGGGGTCTGACCCCAAACACCTTCCAGCTCCTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR-3UTR TCA 90 bp TTACAGTCTAGGTGGAGAAACGGGAACCAGGACACATGGGGAGCCGAGAGAAAAGAGGGATGGGGTGGATaGGGAAGGTCGCTGGACGAT +
Preference number: 2 (lower is better)
Translates to: LQSRWRNGNQDTWGAERKEGWGG*GRSLDD
Trigger: ATCGTCCAGCGACCTTCCTCATCCACCCCATCCCTC...TTTTCTCTCGGCTCCCCATGTGTCCTGGTTCCCGTTTCTCCACCTAGACTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR-3UTR TCA 90 bp CAGTGCCTCCAGGGGCTCAACGTTAGTGCCAGGAAAGACAACTACTCCCAGCCCCTAATCAAAGTGCAATaGACTGGGGAGGGATGGGGT +
Preference number: 2 (lower is better)
Translates to: QCLQGLNVSARKDNYSQPLIKVQ*TGEGWG
Trigger: ACCCCATCCCTCCCCAGTTCATTGCACTTTGATTAG...GGGCTGGGAGTAGTTGTCTTTCCTGGCACTAACGTTGAGCCCCTGGAGGCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR-3UTR GCA 90 bp AGGAGCTGGAAGGTGTTTGGGGTCAGACCCCAATACTCCAAGTACACTAAGCACACTCAAGGGGGCCTGTaGCACCACATGGGACCCTCA +
Preference number: 2 (lower is better)
Translates to: RSWKVFGVRPQYSKYTKHTQGGL*HHMGPS
Trigger: TGAGGGTCCCATGTGGTGGCACAGGCCCCCTTGAGT...GTGCTTAGTGTACTTGGAGTATTGGGGTCTGACCCCAAACACCTTCCAGCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR-3UTR TCA 90 bp AAGACACAGAACAGTACAGGGTGTGGTCCCTGCCCTCGAGAGGTTTACAGTCTAGAAAAGGCTCAACACTaGGACGGGCTCCCCAGTGCA +
Preference number: 2 (lower is better)
Translates to: KTQNSTGCGPCPREVYSLEKAQH*DGLPSA
Trigger: TGCACTGGGGAGCCCGTCTCAGTGTTGAGCCTTTTC...TAGACTGTAAACCTCTCGAGGGCAGGGACCACACCCTGTACTGTTCTGTGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR-3UTR GCA 90 bp TACAGGAGCTGGAAGGTGTTTGGGGTCAGACCCCAATACTCCAAGTACACTAAGACCCCACCTTCCCCCTaGCTTCACAAGACAGAGGGG +
Preference number: 2 (lower is better)
Translates to: YRSWKVFGVRPQYSKYTKTPPSP*LHKTEG
Trigger: CCCCTCTGTCTTGTGAAGGCAGGGGGAAGGTGGGGT...CTTAGTGTACTTGGAGTATTGGGGTCTGACCCCAAACACCTTCCAGCTCCTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR-3UTR CCA 90 bp GACACAGAACAGTACAGGGTGTGGTCCCTGCCCTCGAGAGGTTTACAGTCTAGGATTGCAGAGCCCAGCTaGAGAAAAAGGGTAGCTGGG +
Preference number: 2 (lower is better)
Translates to: DTEQYRVWSLPSRGLQSRIAEPS*RKRVAG
Trigger: CCCAGCTACCCTTTTTCTCCAGCTGGGCTCTGCAAT...CCTAGACTGTAAACCTCTCGAGGGCAGGGACCACACCCTGTACTGTTCTGTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR-3UTR CCA 90 bp TACAGGAGCTGGAAGGTGTTTGGGGTCAGACCCCAATACTCCAAGTACACTAAGCCATATGAGCCCACGTaGCATGCCCTGTCCATAGCC +
Preference number: 2 (lower is better)
Translates to: YRSWKVFGVRPQYSKYTKPYEPT*HALSIA
Trigger: GGCTATGGACAGGGCATGCCACGTGGGCTCATATGG...CTTAGTGTACTTGGAGTATTGGGGTCTGACCCCAAACACCTTCCAGCTCCTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR-3UTR TCA 90 bp GACACAGAACAGTACAGGGTGTGGTCCCTGCCCTCGAGAGGTTTACAGTCTAGGAAAAGAATTCAGGTCTaGGTGTCCAGGAAAGGGGGT +
Preference number: 2 (lower is better)
Translates to: DTEQYRVWSLPSRGLQSRKRIQV*VSRKGG
Trigger: ACCCCCTTTCCTGGACACTCAGACCTGAATTCTTTT...CCTAGACTGTAAACCTCTCGAGGGCAGGGACCACACCCTGTACTGTTCTGTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR-3UTR CCA 90 bp TTACAGTCTAGGTGGAGAAACGGGAACCAGGACACATGGGGAGCCGAGAGAAAACAAAGTGCAATGAACTaGGGAGGGATGGGGTGGATG +
Preference number: 2 (lower is better)
Translates to: LQSRWRNGNQDTWGAERKQSAMN*GGMGWM
Trigger: CATCCACCCCATCCCTCCCCAGTTCATTGCACTTTG...TTTTCTCTCGGCTCCCCATGTGTCCTGGTTCCCGTTTCTCCACCTAGACTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR-3UTR CCA 90 bp GACACAGAACAGTACAGGGTGTGGTCCCTGCCCTCGAGAGGTTTACAGTCTAGGGTATGTTACAGGAGCTaGAAGGTGTTTGGGGTCAGA +
Preference number: 2 (lower is better)
Translates to: DTEQYRVWSLPSRGLQSRVCYRS*KVFGVR
Trigger: TCTGACCCCAAACACCTTCCAGCTCCTGTAACATAC...CCTAGACTGTAAACCTCTCGAGGGCAGGGACCACACCCTGTACTGTTCTGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR-3UTR TCA 90 bp AAGACACAGAACAGTACAGGGTGTGGTCCCTGCCCTCGAGAGGTTTACAGTCTACTAATCAAAGTGCAATaGACTGGGGAGGGATGGGGT +
Preference number: 2 (lower is better)
Translates to: KTQNSTGCGPCPREVYSLLIKVQ*TGEGWG
Trigger: ACCCCATCCCTCCCCAGTTCATTGCACTTTGATTAG...TAGACTGTAAACCTCTCGAGGGCAGGGACCACACCCTGTACTGTTCTGTGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR-3UTR CCA 90 bp TACAGGAGCTGGAAGGTGTTTGGGGTCAGACCCCAATACTCCAAGTACACTAAGCAAAGTGCAATGAACTaGGGAGGGATGGGGTGGATG +
Preference number: 2 (lower is better)
Translates to: YRSWKVFGVRPQYSKYTKQSAMN*GGMGWM
Trigger: CATCCACCCCATCCCTCCCCAGTTCATTGCACTTTG...CTTAGTGTACTTGGAGTATTGGGGTCTGACCCCAAACACCTTCCAGCTCCTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR-3UTR TCA 90 bp AAGACACAGAACAGTACAGGGTGTGGTCCCTGCCCTCGAGAGGTTTACAGTCTAAAAAGAATTCAGGTCTaGGTGTCCAGGAAAGGGGGT +
Preference number: 2 (lower is better)
Translates to: KTQNSTGCGPCPREVYSLKRIQV*VSRKGG
Trigger: ACCCCCTTTCCTGGACACTCAGACCTGAATTCTTTT...TAGACTGTAAACCTCTCGAGGGCAGGGACCACACCCTGTACTGTTCTGTGTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR-3UTR TCA 90 bp TACAGGAGCTGGAAGGTGTTTGGGGTCAGACCCCAATACTCCAAGTACACTAAGCTAATCAAAGTGCAATaGACTGGGGAGGGATGGGGT +
Preference number: 2 (lower is better)
Translates to: YRSWKVFGVRPQYSKYTKLIKVQ*TGEGWG
Trigger: ACCCCATCCCTCCCCAGTTCATTGCACTTTGATTAG...CTTAGTGTACTTGGAGTATTGGGGTCTGACCCCAAACACCTTCCAGCTCCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR-3UTR CCA 90 bp TTACAGTCTAGGTGGAGAAACGGGAACCAGGACACATGGGGAGCCGAGAGAAAAGAGAAAAAGGGTAGCTaGGGCTCCTCAAAAGGTACA +
Preference number: 2 (lower is better)
Translates to: LQSRWRNGNQDTWGAERKEKKGS*GSSKGT
Trigger: TGTACCTTTTGAGGAGCCCCAGCTACCCTTTTTCTC...TTTTCTCTCGGCTCCCCATGTGTCCTGGTTCCCGTTTCTCCACCTAGACTGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR-3UTR CCA 90 bp CACCTGCTGTATATTCAGCATTGTGGGAGGAGCTGTGAAAGACACAGAACAGTAATTGCAGAGCCCAGCTaGAGAAAAAGGGTAGCTGGG +
Preference number: 2 (lower is better)
Translates to: HLLYIQHCGRSCERHRTVIAEPS*RKRVAG
Trigger: CCCAGCTACCCTTTTTCTCCAGCTGGGCTCTGCAAT...TACTGTTCTGTGTCTTTCACAGCTCCTCCCACAATGCTGAATATACAGCAGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR-3UTR CCA 90 bp CACCTGCTGTATATTCAGCATTGTGGGAGGAGCTGTGAAAGACACAGAACAGTAGAGCTGGAAGGTGTTTaGGGTCAGACCCCAATACTC +
Preference number: 2 (lower is better)
Translates to: HLLYIQHCGRSCERHRTVELEGV*GQTPIL
Trigger: GAGTATTGGGGTCTGACCCCAAACACCTTCCAGCTC...TACTGTTCTGTGTCTTTCACAGCTCCTCCCACAATGCTGAATATACAGCAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR-3UTR TCA 90 bp CACCTGCTGTATATTCAGCATTGTGGGAGGAGCTGTGAAAGACACAGAACAGTAAAAAGAATTCAGGTCTaGGTGTCCAGGAAAGGGGGT +
Preference number: 2 (lower is better)
Translates to: HLLYIQHCGRSCERHRTVKRIQV*VSRKGG
Trigger: ACCCCCTTTCCTGGACACTCAGACCTGAATTCTTTT...TACTGTTCTGTGTCTTTCACAGCTCCTCCCACAATGCTGAATATACAGCAGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR-3UTR CCA 90 bp CACCTGCTGTATATTCAGCATTGTGGGAGGAGCTGTGAAAGACACAGAACAGTAGTATGTTACAGGAGCTaGAAGGTGTTTGGGGTCAGA +
Preference number: 2 (lower is better)
Translates to: HLLYIQHCGRSCERHRTVVCYRS*KVFGVR
Trigger: TCTGACCCCAAACACCTTCCAGCTCCTGTAACATAC...TACTGTTCTGTGTCTTTCACAGCTCCTCCCACAATGCTGAATATACAGCAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR CCA 72 bp CCACACCCCTCCAGAGGGTACCACCCAGCGGACAAGTaGGGAGGAGGAAGTAGCTGGCATGAAGCCGGCCCA +
Preference number: 3 (lower is better)
Translates to: PHPSRGYHPADK*GGGSSWHEAGP
Trigger: TGGGCCGGCTTCATGCCAGCTACTTCCTCCTCCCCACTTGTCCGCTGGGTGGTACCCTCTGGAGGGGTGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR-3UTR CAA 90 bp CACTCAAGGGGGCCTGTGCCACCACATGGGACCCTCACCCCCACAGCTAGAGGAGGGACTCCAAAGTTTTaGATGATGCCCCCACTCGGT +
Preference number: 3 (lower is better)
Translates to: HSRGPVPPHGTLTPTARGGTPKF*MMPPLG
Trigger: ACCGAGTGGGGGCATCATCAAAAACTTTGGAGTCCC...TCCTCTAGCTGTGGGGGTGAGGGTCCCATGTGGTGGCACAGGCCCCCTTGAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR-3UTR CAA 90 bp AAGGACAAGGGGGAGGGACAGCAGCAGAGGGGAATTGCAGAGCCCAGCTGGAGAGGGACTCCAAAGTTTTaGATGATGCCCCCACTCGGT +
Preference number: 3 (lower is better)
Translates to: KDKGEGQQQRGIAEPSWRGTPKF*MMPPLG
Trigger: ACCGAGTGGGGGCATCATCAAAAACTTTGGAGTCCC...TCTCCAGCTGGGCTCTGCAATTCCCCTCTGCTGCTGTCCCTCCCCCTTGTCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR TCA 72 bp GTGTCCAGGAAAGGGGGTGAATTTCATAACCGCCTGTaGCAGCGATGGGAAGGAGCCACACCCCTCCAGAGG +
Preference number: 3 (lower is better)
Translates to: VSRKGGEFHNRL*QRWEGATPLQR
Trigger: CCTCTGGAGGGGTGTGGCTCCTTCCCATCGCTGTCACAGGCGGTTATGAAATTCACCCCCTTTCCTGGACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR GCA 72 bp CGGTCGCTGCTTGAGCTGCCTGAGGTAGAACTAGGGTaGCCTTCTTCTTGTGTGTCCCTTCCCCTTCCAGTC +
Preference number: 3 (lower is better)
Translates to: RSLLELPEVELG*PSSCVSLPLPV
Trigger: GACTGGAAGGGGAAGGGACACACAAGAAGAAGGGCACCCTAGTTCTACCTCAGGCAGCTCAAGCAGCGACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR-3UTR CAA 90 bp TTACAGTCTAGGTGGAGAAACGGGAACCAGGACACATGGGGAGCCGAGAGAAAAAGGTCGCTGGACGATTaGAGGGGCCAGTGTCTCCCT +
Preference number: 3 (lower is better)
Translates to: LQSRWRNGNQDTWGAERKRSLDD*RGQCLP
Trigger: AGGGAGACACTGGCCCCTCAAATCGTCCAGCGACCT...TTTTCTCTCGGCTCCCCATGTGTCCTGGTTCCCGTTTCTCCACCTAGACTGTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR-3UTR CAA 90 bp AAGACACAGAACAGTACAGGGTGTGGTCCCTGCCCTCGAGAGGTTTACAGTCTAAGGTCGCTGGACGATTaGAGGGGCCAGTGTCTCCCT +
Preference number: 3 (lower is better)
Translates to: KTQNSTGCGPCPREVYSLRSLDD*RGQCLP
Trigger: AGGGAGACACTGGCCCCTCAAATCGTCCAGCGACCT...TAGACTGTAAACCTCTCGAGGGCAGGGACCACACCCTGTACTGTTCTGTGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR TCA 72 bp AGGGATGGGGTGGATGAGGAAGGTCGCTGGACGATTTaGGGGGCCAGTGTCTCCCTCCTAGAAAGATCTACT +
Preference number: 3 (lower is better)
Translates to: RDGVDEEGRWTI*GASVSLLERST
Trigger: AGTAGATCTTTCTAGGAGGGAGACACTGGCCCCTCAAATCGTCCAGCGACCTTCCTCATCCACCCCATCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR TCA 72 bp TTAGTGCCAGGAAAGACAACTACTCCCAGCCCCATATaGGCCCACGTGGCATGCCCTGTCCATAGCCTCTAC +
Preference number: 3 (lower is better)
Translates to: LVPGKTTTPSPI*AHVACPVHSLY
Trigger: GTAGAGGCTATGGACAGGGCATGCCACGTGGGCTCATATGGGGCTGGGAGTAGTTGTCTTTCCTGGCACTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR TCA 72 bp GCACCTGCTGTATATTCAGCATTGTGGGAGGAGCTGTaGAAGACACAGAACAGTACAGGGTGTGGTCCCTGC +
Preference number: 3 (lower is better)
Translates to: APAVYSALWEEL*KTQNSTGCGPC
Trigger: GCAGGGACCACACCCTGTACTGTTCTGTGTCTTTCACAGCTCCTCCCACAATGCTGAATATACAGCAGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR CCA 72 bp TTACAGTCTAGGTGGAGAAACGGGAACCAGGACACATaGGGAGCCGAGAGAAAACAGTCCAGGCCAGTATGT +
Preference number: 3 (lower is better)
Translates to: LQSRWRNGNQDT*GAERKQSRPVC
Trigger: ACATACTGGCCTGGACTGTTTTCTCTCGGCTCCCCATGTGTCCTGGTTCCCGTTTCTCCACCTAGACTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp CACTCAAGGGGGCCTGTGCCACCACATGGGACCCTCACCCCCACAGCTAGAGGAGGCGGCGGCAGGCCTTaGTGCCGCATGGGTTCTGAC +
Preference number: 4 (lower is better)
Translates to: HSRGPVPPHGTLTPTARGGGGRP*CRMGSD
Trigger: GTCAGAACCCATGCGGCAGCAAGGCCTGCCGCCGCC...TCCTCTAGCTGTGGGGGTGAGGGTCCCATGTGGTGGCACAGGCCCCCTTGAGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp CACTCAAGGGGGCCTGTGCCACCACATGGGACCCTCACCCCCACAGCTAGAGGACAGTCGCGGCTCAGCTaGTCGCTGTCCACTGGGCCG +
Preference number: 4 (lower is better)
Translates to: HSRGPVPPHGTLTPTARGQSRLS*SLSTGP
Trigger: CGGCCCAGTGGACAGCGAGCAGCTGAGCCGCGACTG...TCCTCTAGCTGTGGGGGTGAGGGTCCCATGTGGTGGCACAGGCCCCCTTGAGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp CACTCAAGGGGGCCTGTGCCACCACATGGGACCCTCACCCCCACAGCTAGAGGACTCGCCGGGGCCCCGTaGGAAGGTAGAGCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: HSRGPVPPHGTLTPTARGLAGAP*EGRAWA
Trigger: TGCCCAAGCTCTACCTTCCCACGGGGCCCCGGCGAG...TCCTCTAGCTGTGGGGGTGAGGGTCCCATGTGGTGGCACAGGCCCCCTTGAGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR TCA 90 bp GCAGAAGATGTAGAGCGGGCCTTTGAGGCCCTCGCGCTTCCAGGACTGCAGGCTACATGGCGCCTCCTCTaGGTGCCTCGGTGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: AEDVERAFEALALPGLQATWRLL*VPRCLG
Trigger: GCCGAGGCACCGAGGCACTCAGAGGAGGCGCCATGT...AGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATCTTCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244741.10
CDS-3UTR GCA 90 bp GCAGAAGATGTAGAGCGGGCCTTTGAGGCCCTCGCGCTTCCAGGACTGCAGGCTGGCGGCGGCAGGCCTTaGTGCCGCATGGGTTCTGAC +
Preference number: 4 (lower is better)
Translates to: AEDVERAFEALALPGLQAGGGRP*CRMGSD
Trigger: GTCAGAACCCATGCGGCAGCAAGGCCTGCCGCCGCC...AGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATCTTCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000244741.10
ENST00000373711.3
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp GCAGAAGATGTAGAGCGGGCCTTTGAGGCCCTCGCGCTTCCAGGACTGCAGGCTCAGTCGCGGCTCAGCTaGTCGCTGTCCACTGGGCCG +
Preference number: 4 (lower is better)
Translates to: AEDVERAFEALALPGLQAQSRLS*SLSTGP
Trigger: CGGCCCAGTGGACAGCGAGCAGCTGAGCCGCGACTG...AGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATCTTCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000244741.10
ENST00000373711.3
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp GATGTAGAGCGGGCCTTTGAGGCCCTCGCGCTTCCAGGACTGCAGGCTTCCTGTGCAGAGCAGGTGAGGTaGCAGGCCGCCTGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: DVERAFEALALPGLQASCAEQVR*QAACLL
Trigger: GAGGAGGCAGGCGGCCTGGCACCTCACCTGCTCTGC...ACAGGAAGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000244741.10
ENST00000373711.3
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp GCAGAAGATGTAGAGCGGGCCTTTGAGGCCCTCGCGCTTCCAGGACTGCAGGCTGCAGAGCAGGTGAGGTaGCAGGCCGCCTGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: AEDVERAFEALALPGLQAAEQVR*QAACLL
Trigger: GAGGAGGCAGGCGGCCTGGCACCTCACCTGCTCTGC...AGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATCTTCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000244741.10
ENST00000373711.3
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp GATGTAGAGCGGGCCTTTGAGGCCCTCGCGCTTCCAGGACTGCAGGCTTCCTGTCTGCTCGCTGTCCACTaGGCCGAAGAGGCGGCGGCA +
Preference number: 4 (lower is better)
Translates to: DVERAFEALALPGLQASCLLAVH*AEEAAA
Trigger: TGCCGCCGCCTCTTCGGCCCAGTGGACAGCGAGCAG...ACAGGAAGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000244741.10
ENST00000373711.3
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp GCAGAAGATGTAGAGCGGGCCTTTGAGGCCCTCGCGCTTCCAGGACTGCAGGCTCTCGCCGGGGCCCCGTaGGAAGGTAGAGCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: AEDVERAFEALALPGLQALAGAP*EGRAWA
Trigger: TGCCCAAGCTCTACCTTCCCACGGGGCCCCGGCGAG...AGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATCTTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000244741.10
ENST00000373711.3
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR TCA 90 bp GATGTAGAGCGGGCCTTTGAGGCCCTCGCGCTTCCAGGACTGCAGGCTTCCTGTTGTAGAGCGGGCCTTTaGGGCCCTCGCGCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: DVERAFEALALPGLQASCCRAGL*GPRASR
Trigger: CCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACA...ACAGGAAGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000244741.10
ENST00000373711.3
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR TCA 90 bp GCAGAAGATGTAGAGCGGGCCTTTGAGGCCCTCGCGCTTCCAGGACTGCAGGCTATCCCCAGCCGGTTCTaGCATGGCGCCTGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: AEDVERAFEALALPGLQAIPSRF*HGACLL
Trigger: GAGCAGGCAGGCGCCATGTCAGAACCGGCTGGGGAT...AGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATCTTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373711.3
CDS-3UTR GCA 90 bp GCAGAAGATGTAGAGCGGGCCTTTGAGGCCCTCGCGCTTCCAGGACTGCAGGCTGGCGCCTCCTCTGAGTaGCTCGGTGCCTCGGCGAAT +
Preference number: 4 (lower is better)
Translates to: AEDVERAFEALALPGLQAGASSE*LGASAN
Trigger: ATTCGCCGAGGCACCGAGGCACTCAGAGGAGGCGCC...AGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATCTTCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244741.10
CDS-3UTR GCA 90 bp GATGTAGAGCGGGCCTTTGAGGCCCTCGCGCTTCCAGGACTGCAGGCTTCCTGTGGCGGCAGGCCTTGCTaGCGCATGGGTTCTGACGGA +
Preference number: 4 (lower is better)
Translates to: DVERAFEALALPGLQASCGGRPC*RMGSDG
Trigger: TCCGTCAGAACCCATGCGGCAGCAAGGCCTGCCGCC...ACAGGAAGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000244741.10
ENST00000373711.3
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp GCAGAAGATGTAGAGCGGGCCTTTGAGGCCCTCGCGCTTCCAGGACTGCAGGCTGGGGACCCTTCAGCCTaGTCCCCTGAGCGAGGCACA +
Preference number: 4 (lower is better)
Translates to: AEDVERAFEALALPGLQAGDPSA*SPERGT
Trigger: TGTGCCTCGCTCAGGGGAGCAGGCTGAAGGGTCCCC...AGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATCTTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000244741.10
ENST00000373711.3
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp AAGGACAAGGGGGAGGGACAGCAGCAGAGGGGAATTGCAGAGCCCAGCTGGAGACTGCTCGCTGTCCACTaGGCCGAAGAGGCGGCGGCA +
Preference number: 4 (lower is better)
Translates to: KDKGEGQQQRGIAEPSWRLLAVH*AEEAAA
Trigger: TGCCGCCGCCTCTTCGGCCCAGTGGACAGCGAGCAG...TCTCCAGCTGGGCTCTGCAATTCCCCTCTGCTGCTGTCCCTCCCCCTTGTCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp CACTCAAGGGGGCCTGTGCCACCACATGGGACCCTCACCCCCACAGCTAGAGGATGGGAAGGTAGAGCTTaGGCAGGCCAAGGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: HSRGPVPPHGTLTPTARGWEGRA*AGQGPA
Trigger: TGCGGGGCCTTGGCCTGCCCAAGCTCTACCTTCCCA...TCCTCTAGCTGTGGGGGTGAGGGTCCCATGTGGTGGCACAGGCCCCCTTGAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp GCAGAAGATGTAGAGCGGGCCTTTGAGGCCCTCGCGCTTCCAGGACTGCAGGCTGGCGCCTGCCTGCTCTaGCTTGACTCCAGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: AEDVERAFEALALPGLQAGACLL*LDSRAE
Trigger: CTCAGCCCTGGAGTCAAGCCAGAGCAGGCAGGCGCC...AGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATCTTCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373711.3
CDS-3UTR TCA 90 bp CACTCAAGGGGGCCTGTGCCACCACATGGGACCCTCACCCCCACAGCTAGAGGACGCCGTTTTCGACCCTaGGAGTCTCCAGGTCCACCT +
Preference number: 4 (lower is better)
Translates to: HSRGPVPPHGTLTPTARGRRFRP*ESPGPP
Trigger: AGGTGGACCTGGAGACTCTCAGGGTCGAAAACGGCG...TCCTCTAGCTGTGGGGGTGAGGGTCCCATGTGGTGGCACAGGCCCCCTTGAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR TCA 90 bp AAGGACAAGGGGGAGGGACAGCAGCAGAGGGGAATTGCAGAGCCCAGCTGGAGATGTAGAGCGGGCCTTTaGGGCCCTCGCGCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: KDKGEGQQQRGIAEPSWRCRAGL*GPRASR
Trigger: CCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACA...TCTCCAGCTGGGCTCTGCAATTCCCCTCTGCTGCTGTCCCTCCCCCTTGTCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR TCA 90 bp GCAGAAGATGTAGAGCGGGCCTTTGAGGCCCTCGCGCTTCCAGGACTGCAGGCTGACTCCAGGGCTGAGTaGCTGCACGACCTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: AEDVERAFEALALPGLQADSRAE*LHDLGS
Trigger: GCTGCCAAGGTCGTGCAGTCACTCAGCCCTGGAGTC...AGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATCTTCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373711.3
CDS-3UTR TCA 90 bp GATGTAGAGCGGGCCTTTGAGGCCCTCGCGCTTCCAGGACTGCAGGCTTCCTGTCCGCAGAAACACCTGTaGACGCAGCACACACCCGCG +
Preference number: 4 (lower is better)
Translates to: DVERAFEALALPGLQASCPQKHL*TQHTPA
Trigger: CGCGGGTGTGTGCTGCGTTCACAGGTGTTTCTGCGG...ACAGGAAGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405375.5
CDS-3UTR GCA 90 bp AAGGACAAGGGGGAGGGACAGCAGCAGAGGGGAATTGCAGAGCCCAGCTGGAGAGGCGGCAGGCCTTGCTaGCGCATGGGTTCTGACGGA +
Preference number: 4 (lower is better)
Translates to: KDKGEGQQQRGIAEPSWRGGRPC*RMGSDG
Trigger: TCCGTCAGAACCCATGCGGCAGCAAGGCCTGCCGCC...TCTCCAGCTGGGCTCTGCAATTCCCCTCTGCTGCTGTCCCTCCCCCTTGTCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp GGAGGAAGTAGCTGGCATGAAGCCGGCCCACCCAACCTCCGGGAGAGAGGAAAAGGCGGCAGGCCTTGCTaGCGCATGGGTTCTGACGGA +
Preference number: 4 (lower is better)
Translates to: GGSSWHEAGPPNLRERGKGGRPC*RMGSDG
Trigger: TCCGTCAGAACCCATGCGGCAGCAAGGCCTGCCGCC...TTTTCCTCTCTCCCGGAGGTTGGGTGGGCCGGCTTCATGCCAGCTACTTCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp GATGTAGAGCGGGCCTTTGAGGCCCTCGCGCTTCCAGGACTGCAGGCTTCCTGTCACGGGCCTCCTGGATaGAGCCCGCCATTAGCGCAT +
Preference number: 4 (lower is better)
Translates to: DVERAFEALALPGLQASCHGPPG*SPPLAH
Trigger: ATGCGCTAATGGCGGGCTGCATCCAGGAGGCCCGTG...ACAGGAAGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000244741.10
ENST00000373711.3
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp GCAGAAGATGTAGAGCGGGCCTTTGAGGCCCTCGCGCTTCCAGGACTGCAGGCTTCGCGCTTCCAGGACTaGAGGCTTCCTGTGGGCGGA +
Preference number: 4 (lower is better)
Translates to: AEDVERAFEALALPGLQASRFQD*RLPVGG
Trigger: TCCGCCCACAGGAAGCCTGCAGTCCTGGAAGCGCGA...AGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATCTTCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000244741.10
ENST00000373711.3
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp GCAGAAGATGTAGAGCGGGCCTTTGAGGCCCTCGCGCTTCCAGGACTGCAGGCTGACATGGCGCCTGCCTaGTCTGGCTTGACTCCAGGG +
Preference number: 4 (lower is better)
Translates to: AEDVERAFEALALPGLQADMAPA*SGLTPG
Trigger: CCCTGGAGTCAAGCCAGAGCAGGCAGGCGCCATGTC...AGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATCTTCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373711.3
CDS-3UTR CCA 90 bp GATGTAGAGCGGGCCTTTGAGGCCCTCGCGCTTCCAGGACTGCAGGCTTCCTGTGGCCTTGCTGCCGCATaGGTTCTGACGGACATCCCC +
Preference number: 4 (lower is better)
Translates to: DVERAFEALALPGLQASCGLAAA*VLTDIP
Trigger: GGGGATGTCCGTCAGAACCCATGCGGCAGCAAGGCC...ACAGGAAGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000244741.10
ENST00000373711.3
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp GATGTAGAGCGGGCCTTTGAGGCCCTCGCGCTTCCAGGACTGCAGGCTTCCTGTTGGGAAGGTAGAGCTTaGGCAGGCCAAGGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: DVERAFEALALPGLQASCWEGRA*AGQGPA
Trigger: TGCGGGGCCTTGGCCTGCCCAAGCTCTACCTTCCCA...ACAGGAAGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000244741.10
ENST00000373711.3
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp GCAGAAGATGTAGAGCGGGCCTTTGAGGCCCTCGCGCTTCCAGGACTGCAGGCTGTCTCCAGGTCCACCTaGGGACCCTTCAGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: AEDVERAFEALALPGLQAVSRST*GPFSLL
Trigger: GAGCAGGCTGAAGGGTCCCCAGGTGGACCTGGAGAC...AGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATCTTCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000244741.10
ENST00000373711.3
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp GCAGAAGATGTAGAGCGGGCCTTTGAGGCCCTCGCGCTTCCAGGACTGCAGGCTCAGCCGGTTCTGACATaGCGCCTGCCTGCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: AEDVERAFEALALPGLQAQPVLT*RLPALA
Trigger: AGCCAGAGCAGGCAGGCGCCATGTCAGAACCGGCTG...AGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATCTTCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373711.3
CDS-3UTR TCA 90 bp CACTCAAGGGGGCCTGTGCCACCACATGGGACCCTCACCCCCACAGCTAGAGGAGGCTCCACAAGGAACTaGCTTCGGCAGCTGCTCACA +
Preference number: 4 (lower is better)
Translates to: HSRGPVPPHGTLTPTARGGSTRN*LRQLLT
Trigger: TGTGAGCAGCTGCCGAAGTCAGTTCCTTGTGGAGCC...TCCTCTAGCTGTGGGGGTGAGGGTCCCATGTGGTGGCACAGGCCCCCTTGAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000244741.10
ENST00000405375.5
CDS-3UTR TCA 90 bp GATGTAGAGCGGGCCTTTGAGGCCCTCGCGCTTCCAGGACTGCAGGCTTCCTGTTTCAGCCTGCTCCCCTaGGCGAGGCACAAGGGTACA +
Preference number: 4 (lower is better)
Translates to: DVERAFEALALPGLQASCFSLLP*ARHKGT
Trigger: TGTACCCTTGTGCCTCGCTCAGGGGAGCAGGCTGAA...ACAGGAAGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000244741.10
ENST00000373711.3
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR TCA 90 bp GCAGAAGATGTAGAGCGGGCCTTTGAGGCCCTCGCGCTTCCAGGACTGCAGGCTCGCCGTTTTCGACCCTaGGAGTCTCCAGGTCCACCT +
Preference number: 4 (lower is better)
Translates to: AEDVERAFEALALPGLQARRFRP*ESPGPP
Trigger: AGGTGGACCTGGAGACTCTCAGGGTCGAAAACGGCG...AGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATCTTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000244741.10
ENST00000373711.3
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR TCA 90 bp AAGGACAAGGGGGAGGGACAGCAGCAGAGGGGAATTGCAGAGCCCAGCTGGAGAGGTCGCTGGACGATTTaGGGGGCCAGTGTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: KDKGEGQQQRGIAEPSWRGRWTI*GASVSL
Trigger: GAGGGAGACACTGGCCCCTCAAATCGTCCAGCGACC...TCTCCAGCTGGGCTCTGCAATTCCCCTCTGCTGCTGTCCCTCCCCCTTGTCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR TCA 90 bp GCAGAAGATGTAGAGCGGGCCTTTGAGGCCCTCGCGCTTCCAGGACTGCAGGCTTTGCAGTTTCTCCTCTaGGTGCCTCGGTGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: AEDVERAFEALALPGLQALQFLL*VPRCLG
Trigger: GCCGAGGCACCGAGGCACTCAGAGGAGAAACTGCAA...AGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATCTTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373711.3
CDS-3UTR TCA 90 bp CAGTGCCTCCAGGGGCTCAACGTTAGTGCCAGGAAAGACAACTACTCCCAGCCCCTCTCTCACCTCCTCTaGGTGCCTCGGTGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: QCLQGLNVSARKDNYSQPLSHLL*VPRCLG
Trigger: GCCGAGGCACCGAGGCACTCAGAGGAGGTGAGAGAG...GGGCTGGGAGTAGTTGTCTTTCCTGGCACTAACGTTGAGCCCCTGGAGGCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405375.5
CDS-3UTR GCA 90 bp CAGTGCCTCCAGGGGCTCAACGTTAGTGCCAGGAAAGACAACTACTCCCAGCCCGGCGGCAGGCCTTGCTaGCGCATGGGTTCTGACGGA +
Preference number: 4 (lower is better)
Translates to: QCLQGLNVSARKDNYSQPGGRPC*RMGSDG
Trigger: TCCGTCAGAACCCATGCGGCAGCAAGGCCTGCCGCC...GGGCTGGGAGTAGTTGTCTTTCCTGGCACTAACGTTGAGCCCCTGGAGGCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp GATGTAGAGCGGGCCTTTGAGGCCCTCGCGCTTCCAGGACTGCAGGCTTCCTGTTCCTCTGCTGTCCCCTaGAGCAGAGCAGGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: DVERAFEALALPGLQASCSSAVP*SRAGEV
Trigger: CACCTCACCTGCTCTGCTGCAGGGGACAGCAGAGGA...ACAGGAAGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000244741.10
ENST00000373711.3
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp GGAGGAAGTAGCTGGCATGAAGCCGGCCCACCCAACCTCCGGGAGAGAGGAAAATCGCGCTTCCAGGACTaGAGGCTTCCTGTGGGCGGA +
Preference number: 4 (lower is better)
Translates to: GGSSWHEAGPPNLRERGKSRFQD*RLPVGG
Trigger: TCCGCCCACAGGAAGCCTGCAGTCCTGGAAGCGCGA...TTTTCCTCTCTCCCGGAGGTTGGGTGGGCCGGCTTCATGCCAGCTACTTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp GATGTAGAGCGGGCCTTTGAGGCCCTCGCGCTTCCAGGACTGCAGGCTTCCTGTACCCCACCTTCCCCCTaGCTTCACAAGACAGAGGGG +
Preference number: 4 (lower is better)
Translates to: DVERAFEALALPGLQASCTPPSP*LHKTEG
Trigger: CCCCTCTGTCTTGTGAAGGCAGGGGGAAGGTGGGGT...ACAGGAAGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp GATGTAGAGCGGGCCTTTGAGGCCCTCGCGCTTCCAGGACTGCAGGCTTCCTGTACTCAAGGGGGCCTGTaGCACCACATGGGACCCTCA +
Preference number: 4 (lower is better)
Translates to: DVERAFEALALPGLQASCTQGGL*HHMGPS
Trigger: TGAGGGTCCCATGTGGTGGCACAGGCCCCCTTGAGT...ACAGGAAGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp AAGGACAAGGGGGAGGGACAGCAGCAGAGGGGAATTGCAGAGCCCAGCTGGAGAGGCCTTGCTGCCGCATaGGTTCTGACGGACATCCCC +
Preference number: 4 (lower is better)
Translates to: KDKGEGQQQRGIAEPSWRGLAAA*VLTDIP
Trigger: GGGGATGTCCGTCAGAACCCATGCGGCAGCAAGGCC...TCTCCAGCTGGGCTCTGCAATTCCCCTCTGCTGCTGTCCCTCCCCCTTGTCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp AAGGACAAGGGGGAGGGACAGCAGCAGAGGGGAATTGCAGAGCCCAGCTGGAGATGGGAAGGTAGAGCTTaGGCAGGCCAAGGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: KDKGEGQQQRGIAEPSWRWEGRA*AGQGPA
Trigger: TGCGGGGCCTTGGCCTGCCCAAGCTCTACCTTCCCA...TCTCCAGCTGGGCTCTGCAATTCCCCTCTGCTGCTGTCCCTCCCCCTTGTCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR TCA 90 bp CAGTGCCTCCAGGGGCTCAACGTTAGTGCCAGGAAAGACAACTACTCCCAGCCCATCCCCAGCCGGTTCTaGCATGGCGCCTCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: QCLQGLNVSARKDNYSQPIPSRF*HGASSE
Trigger: CTCAGAGGAGGCGCCATGTCAGAACCGGCTGGGGAT...GGGCTGGGAGTAGTTGTCTTTCCTGGCACTAACGTTGAGCCCCTGGAGGCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244741.10
CDS-3UTR TCA 90 bp CAGTGCCTCCAGGGGCTCAACGTTAGTGCCAGGAAAGACAACTACTCCCAGCCCGATGCCCCCACTCGGTaGGGCCCCTTCAAAGTGCCA +
Preference number: 4 (lower is better)
Translates to: QCLQGLNVSARKDNYSQPDAPTR*GPFKVP
Trigger: TGGCACTTTGAAGGGGCCTCACCGAGTGGGGGCATC...GGGCTGGGAGTAGTTGTCTTTCCTGGCACTAACGTTGAGCCCCTGGAGGCACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR TCA 90 bp GATGTAGAGCGGGCCTTTGAGGCCCTCGCGCTTCCAGGACTGCAGGCTTCCTGTGAAAAGGCTCAACACTaGGACGGGCTCCCCAGTGCA +
Preference number: 4 (lower is better)
Translates to: DVERAFEALALPGLQASCEKAQH*DGLPSA
Trigger: TGCACTGGGGAGCCCGTCTCAGTGTTGAGCCTTTTC...ACAGGAAGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp GGGTCAGACCCCAATACTCCAAGTACACTAAGCACTTCAGTGCCTCCAGGGGCTGGCGGCGGCAGGCCTTaGTGCCGCATGGGTTCTGAC +
Preference number: 4 (lower is better)
Translates to: GSDPNTPSTLSTSVPPGAGGGRP*CRMGSD
Trigger: GTCAGAACCCATGCGGCAGCAAGGCCTGCCGCCGCC...AGCCCCTGGAGGCACTGAAGTGCTTAGTGTACTTGGAGTATTGGGGTCTGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp GGGTCAGACCCCAATACTCCAAGTACACTAAGCACTTCAGTGCCTCCAGGGGCTCAGTCGCGGCTCAGCTaGTCGCTGTCCACTGGGCCG +
Preference number: 4 (lower is better)
Translates to: GSDPNTPSTLSTSVPPGAQSRLS*SLSTGP
Trigger: CGGCCCAGTGGACAGCGAGCAGCTGAGCCGCGACTG...AGCCCCTGGAGGCACTGAAGTGCTTAGTGTACTTGGAGTATTGGGGTCTGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp GACACAGAACAGTACAGGGTGTGGTCCCTGCCCTCGAGAGGTTTACAGTCTAGGCAGTCGCGGCTCAGCTaGTCGCTGTCCACTGGGCCG +
Preference number: 4 (lower is better)
Translates to: DTEQYRVWSLPSRGLQSRQSRLS*SLSTGP
Trigger: CGGCCCAGTGGACAGCGAGCAGCTGAGCCGCGACTG...CCTAGACTGTAAACCTCTCGAGGGCAGGGACCACACCCTGTACTGTTCTGTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp AAGGACAAGGGGGAGGGACAGCAGCAGAGGGGAATTGCAGAGCCCAGCTGGAGATCCTCTGCTGTCCCCTaGAGCAGAGCAGGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: KDKGEGQQQRGIAEPSWRSSAVP*SRAGEV
Trigger: CACCTCACCTGCTCTGCTGCAGGGGACAGCAGAGGA...TCTCCAGCTGGGCTCTGCAATTCCCCTCTGCTGCTGTCCCTCCCCCTTGTCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp GACACAGAACAGTACAGGGTGTGGTCCCTGCCCTCGAGAGGTTTACAGTCTAGGGCAGGCGGGGTGGTCTaGTCCAGGACCCCACCTTCC +
Preference number: 4 (lower is better)
Translates to: DTEQYRVWSLPSRGLQSRAGGVV*SRTPPS
Trigger: GGAAGGTGGGGTCCTGGAGCAGACCACCCCGCCTGC...CCTAGACTGTAAACCTCTCGAGGGCAGGGACCACACCCTGTACTGTTCTGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp GCAGAAGATGTAGAGCGGGCCTTTGAGGCCCTCGCGCTTCCAGGACTGCAGGCTCCAGGGCTGAGTGACTaGACGACCTTGGCAGCAACT +
Preference number: 4 (lower is better)
Translates to: AEDVERAFEALALPGLQAPGLSD*TTLAAT
Trigger: AGTTGCTGCCAAGGTCGTGCAGTCACTCAGCCCTGG...AGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATCTTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373711.3
CDS-3UTR GCA 90 bp AAGGACAAGGGGGAGGGACAGCAGCAGAGGGGAATTGCAGAGCCCAGCTGGAGACTCACCTCCTCTGAGTaGCTCGGTGCCTCGGCGAAT +
Preference number: 4 (lower is better)
Translates to: KDKGEGQQQRGIAEPSWRLTSSE*LGASAN
Trigger: ATTCGCCGAGGCACCGAGGCACTCAGAGGAGGTGAG...TCTCCAGCTGGGCTCTGCAATTCCCCTCTGCTGCTGTCCCTCCCCCTTGTCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405375.5
CDS-3UTR CCA 90 bp GGGTCAGACCCCAATACTCCAAGTACACTAAGCACTTCAGTGCCTCCAGGGGCTCTCGCCGGGGCCCCGTaGGAAGGTAGAGCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: GSDPNTPSTLSTSVPPGALAGAP*EGRAWA
Trigger: TGCCCAAGCTCTACCTTCCCACGGGGCCCCGGCGAG...AGCCCCTGGAGGCACTGAAGTGCTTAGTGTACTTGGAGTATTGGGGTCTGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp CAGTGCCTCCAGGGGCTCAACGTTAGTGCCAGGAAAGACAACTACTCCCAGCCCGTCTCCAGGTCCACCTaGGGACCCTTCAGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: QCLQGLNVSARKDNYSQPVSRST*GPFSLL
Trigger: GAGCAGGCTGAAGGGTCCCCAGGTGGACCTGGAGAC...GGGCTGGGAGTAGTTGTCTTTCCTGGCACTAACGTTGAGCCCCTGGAGGCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR TCA 90 bp CAGTGCCTCCAGGGGCTCAACGTTAGTGCCAGGAAAGACAACTACTCCCAGCCCCGCCGTTTTCGACCCTaGGAGTCTCCAGGTCCACCT +
Preference number: 4 (lower is better)
Translates to: QCLQGLNVSARKDNYSQPRRFRP*ESPGPP
Trigger: AGGTGGACCTGGAGACTCTCAGGGTCGAAAACGGCG...GGGCTGGGAGTAGTTGTCTTTCCTGGCACTAACGTTGAGCCCCTGGAGGCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR TCA 90 bp GGAGGAAGTAGCTGGCATGAAGCCGGCCCACCCAACCTCCGGGAGAGAGGAAAAGAAAAGGCTCAACACTaGGACGGGCTCCCCAGTGCA +
Preference number: 4 (lower is better)
Translates to: GGSSWHEAGPPNLRERGKEKAQH*DGLPSA
Trigger: TGCACTGGGGAGCCCGTCTCAGTGTTGAGCCTTTTC...TTTTCCTCTCTCCCGGAGGTTGGGTGGGCCGGCTTCATGCCAGCTACTTCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR TCA 90 bp AAGGACAAGGGGGAGGGACAGCAGCAGAGGGGAATTGCAGAGCCCAGCTGGAGAGAAAAGGCTCAACACTaGGACGGGCTCCCCAGTGCA +
Preference number: 4 (lower is better)
Translates to: KDKGEGQQQRGIAEPSWREKAQH*DGLPSA
Trigger: TGCACTGGGGAGCCCGTCTCAGTGTTGAGCCTTTTC...TCTCCAGCTGGGCTCTGCAATTCCCCTCTGCTGCTGTCCCTCCCCCTTGTCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR TCA 90 bp GGGTCAGACCCCAATACTCCAAGTACACTAAGCACTTCAGTGCCTCCAGGGGCTATCCCCAGCCGGTTCTaGCATGGCGCCTGCCGCAGA +
Preference number: 4 (lower is better)
Translates to: GSDPNTPSTLSTSVPPGAIPSRF*HGACRR
Trigger: TCTGCGGCAGGCGCCATGTCAGAACCGGCTGGGGAT...AGCCCCTGGAGGCACTGAAGTGCTTAGTGTACTTGGAGTATTGGGGTCTGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000405375.5
CDS-3UTR GCA 90 bp CAGTGCCTCCAGGGGCTCAACGTTAGTGCCAGGAAAGACAACTACTCCCAGCCCACCCCACCTTCCCCCTaGCTTCACAAGACAGAGGGG +
Preference number: 4 (lower is better)
Translates to: QCLQGLNVSARKDNYSQPTPPSP*LHKTEG
Trigger: CCCCTCTGTCTTGTGAAGGCAGGGGGAAGGTGGGGT...GGGCTGGGAGTAGTTGTCTTTCCTGGCACTAACGTTGAGCCCCTGGAGGCACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp GATGTAGAGCGGGCCTTTGAGGCCCTCGCGCTTCCAGGACTGCAGGCTTCCTGTAGTTTCTCCTCTGAGTaGCTCGGTGCCTCGGCGAAT +
Preference number: 4 (lower is better)
Translates to: DVERAFEALALPGLQASCSFSSE*LGASAN
Trigger: ATTCGCCGAGGCACCGAGGCACTCAGAGGAGAAACT...ACAGGAAGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373711.3
CDS-3UTR GCA 90 bp GACACAGAACAGTACAGGGTGTGGTCCCTGCCCTCGAGAGGTTTACAGTCTAGGGGGTCCCCTGTTGTCTaGCGCCGCTCTCTCACCTCC +
Preference number: 4 (lower is better)
Translates to: DTEQYRVWSLPSRGLQSRGSPVV*RRSLTS
Trigger: GGAGGTGAGAGAGCGGCGGCAGACAACAGGGGACCC...CCTAGACTGTAAACCTCTCGAGGGCAGGGACCACACCCTGTACTGTTCTGTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405375.5
CDS-3UTR CCA 90 bp GATGTAGAGCGGGCCTTTGAGGCCCTCGCGCTTCCAGGACTGCAGGCTTCCTGTAGTGACAGGTCCACATaGTCTTCCTCTGCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: DVERAFEALALPGLQASCSDRST*SSSAVP
Trigger: GGGGACAGCAGAGGAAGACCATGTGGACCTGTCACT...ACAGGAAGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000244741.10
ENST00000373711.3
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp GCAGAAGATGTAGAGCGGGCCTTTGAGGCCCTCGCGCTTCCAGGACTGCAGGCTAGTGACAGGTCCACATaGTCTTCCTCTGCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: AEDVERAFEALALPGLQASDRST*SSSAVP
Trigger: GGGGACAGCAGAGGAAGACCATGTGGACCTGTCACT...AGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATCTTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000244741.10
ENST00000373711.3
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp CACTCAAGGGGGCCTGTGCCACCACATGGGACCCTCACCCCCACAGCTAGAGGAATTGCAGAGCCCAGCTaGAGAAAAAGGGTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: HSRGPVPPHGTLTPTARGIAEPS*RKRVAG
Trigger: CCCAGCTACCCTTTTTCTCCAGCTGGGCTCTGCAAT...TCCTCTAGCTGTGGGGGTGAGGGTCCCATGTGGTGGCACAGGCCCCCTTGAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp GAATTCAGGTCTGAGTGTCCAGGAAAGGGGGTGAATTTCATAACCGCCTGTGACACACGCGGGCACGCTTaGCTCGGCTCTGGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: EFRSECPGKGVNFITACDTRGHA*LGSGPP
Trigger: CGGCGGCCCAGAGCCGAGCCAAGCGTGCCCGCGTGT...GTCACAGGCGGTTATGAAATTCACCCCCTTTCCTGGACACTCAGACCTGAATTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405375.5
CDS-3UTR TCA 90 bp CAGTGCCTCCAGGGGCTCAACGTTAGTGCCAGGAAAGACAACTACTCCCAGCCCGGCTCCACAAGGAACTaGCTTCGGCAGCTGCTCACA +
Preference number: 4 (lower is better)
Translates to: QCLQGLNVSARKDNYSQPGSTRN*LRQLLT
Trigger: TGTGAGCAGCTGCCGAAGTCAGTTCCTTGTGGAGCC...GGGCTGGGAGTAGTTGTCTTTCCTGGCACTAACGTTGAGCCCCTGGAGGCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244741.10
ENST00000405375.5
CDS-3UTR TCA 90 bp GATGTAGAGCGGGCCTTTGAGGCCCTCGCGCTTCCAGGACTGCAGGCTTCCTGTCCAGTGGTGTCTCGGTaGCAAAGTCGAAGTTCCATC +
Preference number: 4 (lower is better)
Translates to: DVERAFEALALPGLQASCPVVSR*QSRSSI
Trigger: GATGGAACTTCGACTTTGTCACCGAGACACCACTGG...ACAGGAAGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000244741.10
ENST00000373711.3
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR TCA 90 bp GGAGGAAGTAGCTGGCATGAAGCCGGCCCACCCAACCTCCGGGAGAGAGGAAAATTTCATAACCGCCTGTaGCAGCGATGGGAAGGAGCC +
Preference number: 4 (lower is better)
Translates to: GGSSWHEAGPPNLRERGKFHNRL*QRWEGA
Trigger: GGCTCCTTCCCATCGCTGTCACAGGCGGTTATGAAA...TTTTCCTCTCTCCCGGAGGTTGGGTGGGCCGGCTTCATGCCAGCTACTTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR TCA 90 bp GACACAGAACAGTACAGGGTGTGGTCCCTGCCCTCGAGAGGTTTACAGTCTAGGGATGCCCCCACTCGGTaGGGCCCCTTCAAAGTGCCA +
Preference number: 4 (lower is better)
Translates to: DTEQYRVWSLPSRGLQSRDAPTR*GPFKVP
Trigger: TGGCACTTTGAAGGGGCCTCACCGAGTGGGGGCATC...CCTAGACTGTAAACCTCTCGAGGGCAGGGACCACACCCTGTACTGTTCTGTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR TCA 90 bp CACTCAAGGGGGCCTGTGCCACCACATGGGACCCTCACCCCCACAGCTAGAGGACTAATCAAAGTGCAATaGACTGGGGAGGGATGGGGT +
Preference number: 4 (lower is better)
Translates to: HSRGPVPPHGTLTPTARGLIKVQ*TGEGWG
Trigger: ACCCCATCCCTCCCCAGTTCATTGCACTTTGATTAG...TCCTCTAGCTGTGGGGGTGAGGGTCCCATGTGGTGGCACAGGCCCCCTTGAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp AAGACACAGAACAGTACAGGGTGTGGTCCCTGCCCTCGAGAGGTTTACAGTCTACAGTCGCGGCTCAGCTaGTCGCTGTCCACTGGGCCG +
Preference number: 4 (lower is better)
Translates to: KTQNSTGCGPCPREVYSLQSRLS*SLSTGP
Trigger: CGGCCCAGTGGACAGCGAGCAGCTGAGCCGCGACTG...TAGACTGTAAACCTCTCGAGGGCAGGGACCACACCCTGTACTGTTCTGTGTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp AGGAGCTGGAAGGTGTTTGGGGTCAGACCCCAATACTCCAAGTACACTAAGCACGCAGAGCAGGTGAGGTaGCAGGCCGCCTGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: RSWKVFGVRPQYSKYTKHAEQVR*QAACLL
Trigger: GAGGAGGCAGGCGGCCTGGCACCTCACCTGCTCTGC...GTGCTTAGTGTACTTGGAGTATTGGGGTCTGACCCCAAACACCTTCCAGCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp GACACAGAACAGTACAGGGTGTGGTCCCTGCCCTCGAGAGGTTTACAGTCTAGGGGCCTTGCTGCCGCATaGGTTCTGACGGACATCCCC +
Preference number: 4 (lower is better)
Translates to: DTEQYRVWSLPSRGLQSRGLAAA*VLTDIP
Trigger: GGGGATGTCCGTCAGAACCCATGCGGCAGCAAGGCC...CCTAGACTGTAAACCTCTCGAGGGCAGGGACCACACCCTGTACTGTTCTGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp AAGACACAGAACAGTACAGGGTGTGGTCCCTGCCCTCGAGAGGTTTACAGTCTACTGCTCGCTGTCCACTaGGCCGAAGAGGCGGCGGCA +
Preference number: 4 (lower is better)
Translates to: KTQNSTGCGPCPREVYSLLLAVH*AEEAAA
Trigger: TGCCGCCGCCTCTTCGGCCCAGTGGACAGCGAGCAG...TAGACTGTAAACCTCTCGAGGGCAGGGACCACACCCTGTACTGTTCTGTGTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp GCAGAAGATGTAGAGCGGGCCTTTGAGGCCCTCGCGCTTCCAGGACTGCAGGCTGAAGTCACCCTCCAGTaGTGTCTCGGTGACAAAGTC +
Preference number: 4 (lower is better)
Translates to: AEDVERAFEALALPGLQAEVTLQ*CLGDKV
Trigger: GACTTTGTCACCGAGACACCACTGGAGGGTGACTTC...AGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATCTTCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000244741.10
ENST00000373711.3
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp GACACAGAACAGTACAGGGTGTGGTCCCTGCCCTCGAGAGGTTTACAGTCTAGGTGGGAAGGTAGAGCTTaGGCAGGCCAAGGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: DTEQYRVWSLPSRGLQSRWEGRA*AGQGPA
Trigger: TGCGGGGCCTTGGCCTGCCCAAGCTCTACCTTCCCA...CCTAGACTGTAAACCTCTCGAGGGCAGGGACCACACCCTGTACTGTTCTGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp AGGAGCTGGAAGGTGTTTGGGGTCAGACCCCAATACTCCAAGTACACTAAGCACCTCGCCGGGGCCCCGTaGGAAGGTAGAGCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: RSWKVFGVRPQYSKYTKHLAGAP*EGRAWA
Trigger: TGCCCAAGCTCTACCTTCCCACGGGGCCCCGGCGAG...GTGCTTAGTGTACTTGGAGTATTGGGGTCTGACCCCAAACACCTTCCAGCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp GACACAGAACAGTACAGGGTGTGGTCCCTGCCCTCGAGAGGTTTACAGTCTAGGGTCTCCAGGTCCACCTaGGGACCCTTCAGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: DTEQYRVWSLPSRGLQSRVSRST*GPFSLL
Trigger: GAGCAGGCTGAAGGGTCCCCAGGTGGACCTGGAGAC...CCTAGACTGTAAACCTCTCGAGGGCAGGGACCACACCCTGTACTGTTCTGTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp CACTCAAGGGGGCCTGTGCCACCACATGGGACCCTCACCCCCACAGCTAGAGGAAGAAATCTGTCATGCTaGTCTGCCGCCGTTTTCGAC +
Preference number: 4 (lower is better)
Translates to: HSRGPVPPHGTLTPTARGRNLSC*SAAVFD
Trigger: GTCGAAAACGGCGGCAGACCAGCATGACAGATTTCT...TCCTCTAGCTGTGGGGGTGAGGGTCCCATGTGGTGGCACAGGCCCCCTTGAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp GATGTAGAGCGGGCCTTTGAGGCCCTCGCGCTTCCAGGACTGCAGGCTTCCTGTATTGCAGAGCCCAGCTaGAGAAAAAGGGTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: DVERAFEALALPGLQASCIAEPS*RKRVAG
Trigger: CCCAGCTACCCTTTTTCTCCAGCTGGGCTCTGCAAT...ACAGGAAGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR TCA 90 bp GGAGGAAGTAGCTGGCATGAAGCCGGCCCACCCAACCTCCGGGAGAGAGGAAAACCAGTGGTGTCTCGGTaGCAAAGTCGAAGTTCCATC +
Preference number: 4 (lower is better)
Translates to: GGSSWHEAGPPNLRERGKPVVSR*QSRSSI
Trigger: GATGGAACTTCGACTTTGTCACCGAGACACCACTGG...TTTTCCTCTCTCCCGGAGGTTGGGTGGGCCGGCTTCATGCCAGCTACTTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR TCA 90 bp GACACAGAACAGTACAGGGTGTGGTCCCTGCCCTCGAGAGGTTTACAGTCTAGGTTCAGCCTGCTCCCCTaGGCGAGGCACAAGGGTACA +
Preference number: 4 (lower is better)
Translates to: DTEQYRVWSLPSRGLQSRFSLLP*ARHKGT
Trigger: TGTACCCTTGTGCCTCGCTCAGGGGAGCAGGCTGAA...CCTAGACTGTAAACCTCTCGAGGGCAGGGACCACACCCTGTACTGTTCTGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR TCA 90 bp GGGTCAGACCCCAATACTCCAAGTACACTAAGCACTTCAGTGCCTCCAGGGGCTTTCAGCCTGCTCCCCTaGGCGAGGCACAAGGGTACA +
Preference number: 4 (lower is better)
Translates to: GSDPNTPSTLSTSVPPGAFSLLP*ARHKGT
Trigger: TGTACCCTTGTGCCTCGCTCAGGGGAGCAGGCTGAA...AGCCCCTGGAGGCACTGAAGTGCTTAGTGTACTTGGAGTATTGGGGTCTGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR TCA 90 bp CACTCAAGGGGGCCTGTGCCACCACATGGGACCCTCACCCCCACAGCTAGAGGAAAAAGAATTCAGGTCTaGGTGTCCAGGAAAGGGGGT +
Preference number: 4 (lower is better)
Translates to: HSRGPVPPHGTLTPTARGKRIQV*VSRKGG
Trigger: ACCCCCTTTCCTGGACACTCAGACCTGAATTCTTTT...TCCTCTAGCTGTGGGGGTGAGGGTCCCATGTGGTGGCACAGGCCCCCTTGAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR TCA 90 bp GATGTAGAGCGGGCCTTTGAGGCCCTCGCGCTTCCAGGACTGCAGGCTTCCTGTCTAATCAAAGTGCAATaGACTGGGGAGGGATGGGGT +
Preference number: 4 (lower is better)
Translates to: DVERAFEALALPGLQASCLIKVQ*TGEGWG
Trigger: ACCCCATCCCTCCCCAGTTCATTGCACTTTGATTAG...ACAGGAAGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp TACAGGAGCTGGAAGGTGTTTGGGGTCAGACCCCAATACTCCAAGTACACTAAGGGCGGCGGCAGGCCTTaGTGCCGCATGGGTTCTGAC +
Preference number: 4 (lower is better)
Translates to: YRSWKVFGVRPQYSKYTKGGGRP*CRMGSD
Trigger: GTCAGAACCCATGCGGCAGCAAGGCCTGCCGCCGCC...CTTAGTGTACTTGGAGTATTGGGGTCTGACCCCAAACACCTTCCAGCTCCTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp GAATTCAGGTCTGAGTGTCCAGGAAAGGGGGTGAATTTCATAACCGCCTGTGACGGCGGCGGCAGGCCTTaGTGCCGCATGGGTTCTGAC +
Preference number: 4 (lower is better)
Translates to: EFRSECPGKGVNFITACDGGGRP*CRMGSD
Trigger: GTCAGAACCCATGCGGCAGCAAGGCCTGCCGCCGCC...GTCACAGGCGGTTATGAAATTCACCCCCTTTCCTGGACACTCAGACCTGAATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp GAATTCAGGTCTGAGTGTCCAGGAAAGGGGGTGAATTTCATAACCGCCTGTGACGCAGAGCAGGTGAGGTaGCAGGCCGCCTGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: EFRSECPGKGVNFITACDAEQVR*QAACLL
Trigger: GAGGAGGCAGGCGGCCTGGCACCTCACCTGCTCTGC...GTCACAGGCGGTTATGAAATTCACCCCCTTTCCTGGACACTCAGACCTGAATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp AAGACACAGAACAGTACAGGGTGTGGTCCCTGCCCTCGAGAGGTTTACAGTCTAGGGGACCCTTCAGCCTaGTCCCCTGAGCGAGGCACA +
Preference number: 4 (lower is better)
Translates to: KTQNSTGCGPCPREVYSLGDPSA*SPERGT
Trigger: TGTGCCTCGCTCAGGGGAGCAGGCTGAAGGGTCCCC...TAGACTGTAAACCTCTCGAGGGCAGGGACCACACCCTGTACTGTTCTGTGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp GCAGAAGATGTAGAGCGGGCCTTTGAGGCCCTCGCGCTTCCAGGACTGCAGGCTGGTAGAAATCTGTCATaGTGGTCTGCCGCCGTTTTC +
Preference number: 4 (lower is better)
Translates to: AEDVERAFEALALPGLQAGRNLS*WSAAVF
Trigger: GAAAACGGCGGCAGACCAGCATGACAGATTTCTACC...AGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATCTTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000244741.10
ENST00000373711.3
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp GGGTCAGACCCCAATACTCCAAGTACACTAAGCACTTCAGTGCCTCCAGGGGCTACCCCACCTTCCCCCTaGCTTCACAAGACAGAGGGG +
Preference number: 4 (lower is better)
Translates to: GSDPNTPSTLSTSVPPGATPPSP*LHKTEG
Trigger: CCCCTCTGTCTTGTGAAGGCAGGGGGAAGGTGGGGT...AGCCCCTGGAGGCACTGAAGTGCTTAGTGTACTTGGAGTATTGGGGTCTGACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp GAATTCAGGTCTGAGTGTCCAGGAAAGGGGGTGAATTTCATAACCGCCTGTGACGCAGGCGGGGTGGTCTaGTCCAGGACCCCACCTTCC +
Preference number: 4 (lower is better)
Translates to: EFRSECPGKGVNFITACDAGGVV*SRTPPS
Trigger: GGAAGGTGGGGTCCTGGAGCAGACCACCCCGCCTGC...GTCACAGGCGGTTATGAAATTCACCCCCTTTCCTGGACACTCAGACCTGAATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp GCAGAAGATGTAGAGCGGGCCTTTGAGGCCCTCGCGCTTCCAGGACTGCAGGCTGGACAAGTCCCAACTTaGAGTTTCTCCTCTGAGTGC +
Preference number: 4 (lower is better)
Translates to: AEDVERAFEALALPGLQAGQVPT*SFSSEC
Trigger: GCACTCAGAGGAGAAACTGCAAGTTGGGACTTGTCC...AGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATCTTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373711.3
CDS-3UTR CCA 90 bp GAATTCAGGTCTGAGTGTCCAGGAAAGGGGGTGAATTTCATAACCGCCTGTGACCTGCTCGCTGTCCACTaGGCCGAAGAGGCGGCGGCA +
Preference number: 4 (lower is better)
Translates to: EFRSECPGKGVNFITACDLLAVH*AEEAAA
Trigger: TGCCGCCGCCTCTTCGGCCCAGTGGACAGCGAGCAG...GTCACAGGCGGTTATGAAATTCACCCCCTTTCCTGGACACTCAGACCTGAATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp GGAGGAAGTAGCTGGCATGAAGCCGGCCCACCCAACCTCCGGGAGAGAGGAAAAGAAGTCACCCTCCAGTaGTGTCTCGGTGACAAAGTC +
Preference number: 4 (lower is better)
Translates to: GGSSWHEAGPPNLRERGKEVTLQ*CLGDKV
Trigger: GACTTTGTCACCGAGACACCACTGGAGGGTGACTTC...TTTTCCTCTCTCCCGGAGGTTGGGTGGGCCGGCTTCATGCCAGCTACTTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp TACAGGAGCTGGAAGGTGTTTGGGGTCAGACCCCAATACTCCAAGTACACTAAGCTCGCCGGGGCCCCGTaGGAAGGTAGAGCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: YRSWKVFGVRPQYSKYTKLAGAP*EGRAWA
Trigger: TGCCCAAGCTCTACCTTCCCACGGGGCCCCGGCGAG...CTTAGTGTACTTGGAGTATTGGGGTCTGACCCCAAACACCTTCCAGCTCCTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp GCAGAAGATGTAGAGCGGGCCTTTGAGGCCCTCGCGCTTCCAGGACTGCAGGCTAGAAATCTGTCATGCTaGTCTGCCGCCGTTTTCGAC +
Preference number: 4 (lower is better)
Translates to: AEDVERAFEALALPGLQARNLSC*SAAVFD
Trigger: GTCGAAAACGGCGGCAGACCAGCATGACAGATTTCT...AGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATCTTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000244741.10
ENST00000373711.3
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp GATGTAGAGCGGGCCTTTGAGGCCCTCGCGCTTCCAGGACTGCAGGCTTCCTGTAGAAATCTGTCATGCTaGTCTGCCGCCGTTTTCGAC +
Preference number: 4 (lower is better)
Translates to: DVERAFEALALPGLQASCRNLSC*SAAVFD
Trigger: GTCGAAAACGGCGGCAGACCAGCATGACAGATTTCT...ACAGGAAGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000244741.10
ENST00000373711.3
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp GCAGAAGATGTAGAGCGGGCCTTTGAGGCCCTCGCGCTTCCAGGACTGCAGGCTATTAGGGCTTCCTCTTaGAGAAGATCAGCCGGCGTT +
Preference number: 4 (lower is better)
Translates to: AEDVERAFEALALPGLQAIRASS*RRSAGV
Trigger: AACGCCGGCTGATCTTCTCCAAGAGGAAGCCCTAAT...AGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATCTTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000244741.10
ENST00000373711.3
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp GGAGGAAGTAGCTGGCATGAAGCCGGCCCACCCAACCTCCGGGAGAGAGGAAAAGAGCTGGAAGGTGTTTaGGGTCAGACCCCAATACTC +
Preference number: 4 (lower is better)
Translates to: GGSSWHEAGPPNLRERGKELEGV*GQTPIL
Trigger: GAGTATTGGGGTCTGACCCCAAACACCTTCCAGCTC...TTTTCCTCTCTCCCGGAGGTTGGGTGGGCCGGCTTCATGCCAGCTACTTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp GCAGAAGATGTAGAGCGGGCCTTTGAGGCCCTCGCGCTTCCAGGACTGCAGGCTGTGACTGCACGACCTTaGCAGCAACTGGATTTTCCT +
Preference number: 4 (lower is better)
Translates to: AEDVERAFEALALPGLQAVTARP*QQLDFP
Trigger: AGGAAAATCCAGTTGCTGCCAAGGTCGTGCAGTCAC...AGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATCTTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373711.3
CDS-3UTR CCA 90 bp GACACAGAACAGTACAGGGTGTGGTCCCTGCCCTCGAGAGGTTTACAGTCTAGGCAGCCGGTTCTGACATaGCGCCTGCCGCAGAAACAC +
Preference number: 4 (lower is better)
Translates to: DTEQYRVWSLPSRGLQSRQPVLT*RLPQKH
Trigger: GTGTTTCTGCGGCAGGCGCCATGTCAGAACCGGCTG...CCTAGACTGTAAACCTCTCGAGGGCAGGGACCACACCCTGTACTGTTCTGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405375.5
CDS-3UTR TCA 90 bp TTACAGTCTAGGTGGAGAAACGGGAACCAGGACACATGGGGAGCCGAGAGAAAAGGTCGCTGGACGATTTaGGGGGCCAGTGTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: LQSRWRNGNQDTWGAERKGRWTI*GASVSL
Trigger: GAGGGAGACACTGGCCCCTCAAATCGTCCAGCGACC...TTTTCTCTCGGCTCCCCATGTGTCCTGGTTCCCGTTTCTCCACCTAGACTGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR TCA 90 bp GATGTAGAGCGGGCCTTTGAGGCCCTCGCGCTTCCAGGACTGCAGGCTTCCTGTTTGTGGGAGGAGCTGTaGAAGACACAGAACAGTACA +
Preference number: 4 (lower is better)
Translates to: DVERAFEALALPGLQASCLWEEL*KTQNST
Trigger: TGTACTGTTCTGTGTCTTTCACAGCTCCTCCCACAA...ACAGGAAGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp AGGAGCTGGAAGGTGTTTGGGGTCAGACCCCAATACTCCAAGTACACTAAGCACCACGGGCCTCCTGGATaGAGCCCGCCATTAGCGCAT +
Preference number: 4 (lower is better)
Translates to: RSWKVFGVRPQYSKYTKHHGPPG*SPPLAH
Trigger: ATGCGCTAATGGCGGGCTGCATCCAGGAGGCCCGTG...GTGCTTAGTGTACTTGGAGTATTGGGGTCTGACCCCAAACACCTTCCAGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp TTACAGTCTAGGTGGAGAAACGGGAACCAGGACACATGGGGAGCCGAGAGAAAACACGGGCCTCCTGGATaGAGCCCGCCATTAGCGCAT +
Preference number: 4 (lower is better)
Translates to: LQSRWRNGNQDTWGAERKHGPPG*SPPLAH
Trigger: ATGCGCTAATGGCGGGCTGCATCCAGGAGGCCCGTG...TTTTCTCTCGGCTCCCCATGTGTCCTGGTTCCCGTTTCTCCACCTAGACTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp TACAGGAGCTGGAAGGTGTTTGGGGTCAGACCCCAATACTCCAAGTACACTAAGGGGGACCCTTCAGCCTaGTCCCCTGAGCGAGGCACA +
Preference number: 4 (lower is better)
Translates to: YRSWKVFGVRPQYSKYTKGDPSA*SPERGT
Trigger: TGTGCCTCGCTCAGGGGAGCAGGCTGAAGGGTCCCC...CTTAGTGTACTTGGAGTATTGGGGTCTGACCCCAAACACCTTCCAGCTCCTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp AAGGACAAGGGGGAGGGACAGCAGCAGAGGGGAATTGCAGAGCCCAGCTGGAGAGGTAGAAATCTGTCATaGTGGTCTGCCGCCGTTTTC +
Preference number: 4 (lower is better)
Translates to: KDKGEGQQQRGIAEPSWRGRNLS*WSAAVF
Trigger: GAAAACGGCGGCAGACCAGCATGACAGATTTCTACC...TCTCCAGCTGGGCTCTGCAATTCCCCTCTGCTGCTGTCCCTCCCCCTTGTCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp GGGTCAGACCCCAATACTCCAAGTACACTAAGCACTTCAGTGCCTCCAGGGGCTCTCAGCCCTAGGCTGTaGTCACTTCAGGGTCACCCT +
Preference number: 4 (lower is better)
Translates to: GSDPNTPSTLSTSVPPGALSPRL*SLQGHP
Trigger: AGGGTGACCCTGAAGTGAGCACAGCCTAGGGCTGAG...AGCCCCTGGAGGCACTGAAGTGCTTAGTGTACTTGGAGTATTGGGGTCTGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp GACACAGAACAGTACAGGGTGTGGTCCCTGCCCTCGAGAGGTTTACAGTCTAGGCTCAGCCCTAGGCTGTaGTCACTTCAGGGTCACCCT +
Preference number: 4 (lower is better)
Translates to: DTEQYRVWSLPSRGLQSRLSPRL*SLQGHP
Trigger: AGGGTGACCCTGAAGTGAGCACAGCCTAGGGCTGAG...CCTAGACTGTAAACCTCTCGAGGGCAGGGACCACACCCTGTACTGTTCTGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp TTACAGTCTAGGTGGAGAAACGGGAACCAGGACACATGGGGAGCCGAGAGAAAATGGGAAGGTAGAGCTTaGGCAGGCCAAGGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: LQSRWRNGNQDTWGAERKWEGRA*AGQGPA
Trigger: TGCGGGGCCTTGGCCTGCCCAAGCTCTACCTTCCCA...TTTTCTCTCGGCTCCCCATGTGTCCTGGTTCCCGTTTCTCCACCTAGACTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp TTACAGTCTAGGTGGAGAAACGGGAACCAGGACACATGGGGAGCCGAGAGAAAAGTCTCCAGGTCCACCTaGGGACCCTTCAGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: LQSRWRNGNQDTWGAERKVSRST*GPFSLL
Trigger: GAGCAGGCTGAAGGGTCCCCAGGTGGACCTGGAGAC...TTTTCTCTCGGCTCCCCATGTGTCCTGGTTCCCGTTTCTCCACCTAGACTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp GATGTAGAGCGGGCCTTTGAGGCCCTCGCGCTTCCAGGACTGCAGGCTTCCTGTAGATCAGCCGGCGTTTaGAGTGGTAGAAATCTGTCA +
Preference number: 4 (lower is better)
Translates to: DVERAFEALALPGLQASCRSAGV*SGRNLS
Trigger: TGACAGATTTCTACCACTCCAAACGCCGGCTGATCT...ACAGGAAGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000244741.10
ENST00000373711.3
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp GCAGAAGATGTAGAGCGGGCCTTTGAGGCCCTCGCGCTTCCAGGACTGCAGGCTGAGAAAAAGGGTAGCTaGGGCTCCTCAAAAGGTACA +
Preference number: 4 (lower is better)
Translates to: AEDVERAFEALALPGLQAEKKGS*GSSKGT
Trigger: TGTACCTTTTGAGGAGCCCCAGCTACCCTTTTTCTC...AGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATCTTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp GATGTAGAGCGGGCCTTTGAGGCCCTCGCGCTTCCAGGACTGCAGGCTTCCTGTGAGAAAAAGGGTAGCTaGGGCTCCTCAAAAGGTACA +
Preference number: 4 (lower is better)
Translates to: DVERAFEALALPGLQASCEKKGS*GSSKGT
Trigger: TGTACCTTTTGAGGAGCCCCAGCTACCCTTTTTCTC...ACAGGAAGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp CAGTGCCTCCAGGGGCTCAACGTTAGTGCCAGGAAAGACAACTACTCCCAGCCCGAGCTGGAAGGTGTTTaGGGTCAGACCCCAATACTC +
Preference number: 4 (lower is better)
Translates to: QCLQGLNVSARKDNYSQPELEGV*GQTPIL
Trigger: GAGTATTGGGGTCTGACCCCAAACACCTTCCAGCTC...GGGCTGGGAGTAGTTGTCTTTCCTGGCACTAACGTTGAGCCCCTGGAGGCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp GCAGAAGATGTAGAGCGGGCCTTTGAGGCCCTCGCGCTTCCAGGACTGCAGGCTGACCTTGGCAGCAACTaGATTTTCCTAGGGACAAGT +
Preference number: 4 (lower is better)
Translates to: AEDVERAFEALALPGLQADLGSN*IFLGTS
Trigger: ACTTGTCCCTAGGAAAATCCAGTTGCTGCCAAGGTC...AGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATCTTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373711.3
CDS-3UTR TCA 90 bp AAGACACAGAACAGTACAGGGTGTGGTCCCTGCCCTCGAGAGGTTTACAGTCTACGCCGTTTTCGACCCTaGGAGTCTCCAGGTCCACCT +
Preference number: 4 (lower is better)
Translates to: KTQNSTGCGPCPREVYSLRRFRP*ESPGPP
Trigger: AGGTGGACCTGGAGACTCTCAGGGTCGAAAACGGCG...TAGACTGTAAACCTCTCGAGGGCAGGGACCACACCCTGTACTGTTCTGTGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR TCA 90 bp GGAGGAAGTAGCTGGCATGAAGCCGGCCCACCCAACCTCCGGGAGAGAGGAAAAAAAAGAATTCAGGTCTaGGTGTCCAGGAAAGGGGGT +
Preference number: 4 (lower is better)
Translates to: GGSSWHEAGPPNLRERGKKRIQV*VSRKGG
Trigger: ACCCCCTTTCCTGGACACTCAGACCTGAATTCTTTT...TTTTCCTCTCTCCCGGAGGTTGGGTGGGCCGGCTTCATGCCAGCTACTTCCTCC
56% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR TCA 90 bp GAATTCAGGTCTGAGTGTCCAGGAAAGGGGGTGAATTTCATAACCGCCTGTGACGATGCCCCCACTCGGTaGGGCCCCTTCAAAGTGCCA +
Preference number: 4 (lower is better)
Translates to: EFRSECPGKGVNFITACDDAPTR*GPFKVP
Trigger: TGGCACTTTGAAGGGGCCTCACCGAGTGGGGGCATC...GTCACAGGCGGTTATGAAATTCACCCCCTTTCCTGGACACTCAGACCTGAATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR TCA 90 bp TACAGGAGCTGGAAGGTGTTTGGGGTCAGACCCCAATACTCCAAGTACACTAAGGATGCCCCCACTCGGTaGGGCCCCTTCAAAGTGCCA +
Preference number: 4 (lower is better)
Translates to: YRSWKVFGVRPQYSKYTKDAPTR*GPFKVP
Trigger: TGGCACTTTGAAGGGGCCTCACCGAGTGGGGGCATC...CTTAGTGTACTTGGAGTATTGGGGTCTGACCCCAAACACCTTCCAGCTCCTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR TCA 90 bp GAATTCAGGTCTGAGTGTCCAGGAAAGGGGGTGAATTTCATAACCGCCTGTGACGGTCGCTGGACGATTTaGGGGGCCAGTGTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: EFRSECPGKGVNFITACDGRWTI*GASVSL
Trigger: GAGGGAGACACTGGCCCCTCAAATCGTCCAGCGACC...GTCACAGGCGGTTATGAAATTCACCCCCTTTCCTGGACACTCAGACCTGAATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR TCA 90 bp AAGACACAGAACAGTACAGGGTGTGGTCCCTGCCCTCGAGAGGTTTACAGTCTAGAGGGATGGGGTGGATaGGGAAGGTCGCTGGACGAT +
Preference number: 4 (lower is better)
Translates to: KTQNSTGCGPCPREVYSLEGWGG*GRSLDD
Trigger: ATCGTCCAGCGACCTTCCTCATCCACCCCATCCCTC...TAGACTGTAAACCTCTCGAGGGCAGGGACCACACCCTGTACTGTTCTGTGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR TCA 90 bp GACACAGAACAGTACAGGGTGTGGTCCCTGCCCTCGAGAGGTTTACAGTCTAGGTGTGGTTGCAGCAGCTaGAAACAGGCAGCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: DTEQYRVWSLPSRGLQSRCGCSS*KQAAQG
Trigger: TCCTTGGGCTGCCTGTTTTCAGCTGCTGCAACCACA...CCTAGACTGTAAACCTCTCGAGGGCAGGGACCACACCCTGTACTGTTCTGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448526.6
CDS-3UTR GCA 90 bp AGGAGCTGGAAGGTGTTTGGGGTCAGACCCCAATACTCCAAGTACACTAAGCACTCCTCTGCTGTCCCCTaGAGCAGAGCAGGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: RSWKVFGVRPQYSKYTKHSSAVP*SRAGEV
Trigger: CACCTCACCTGCTCTGCTGCAGGGGACAGCAGAGGA...GTGCTTAGTGTACTTGGAGTATTGGGGTCTGACCCCAAACACCTTCCAGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp GAATTCAGGTCTGAGTGTCCAGGAAAGGGGGTGAATTTCATAACCGCCTGTGACTCGCGCTTCCAGGACTaGAGGCTTCCTGTGGGCGGA +
Preference number: 4 (lower is better)
Translates to: EFRSECPGKGVNFITACDSRFQD*RLPVGG
Trigger: TCCGCCCACAGGAAGCCTGCAGTCCTGGAAGCGCGA...GTCACAGGCGGTTATGAAATTCACCCCCTTTCCTGGACACTCAGACCTGAATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp TTACAGTCTAGGTGGAGAAACGGGAACCAGGACACATGGGGAGCCGAGAGAAAAACTCAAGGGGGCCTGTaGCACCACATGGGACCCTCA +
Preference number: 4 (lower is better)
Translates to: LQSRWRNGNQDTWGAERKTQGGL*HHMGPS
Trigger: TGAGGGTCCCATGTGGTGGCACAGGCCCCCTTGAGT...TTTTCTCTCGGCTCCCCATGTGTCCTGGTTCCCGTTTCTCCACCTAGACTGTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp AAGACACAGAACAGTACAGGGTGTGGTCCCTGCCCTCGAGAGGTTTACAGTCTAACTCAAGGGGGCCTGTaGCACCACATGGGACCCTCA +
Preference number: 4 (lower is better)
Translates to: KTQNSTGCGPCPREVYSLTQGGL*HHMGPS
Trigger: TGAGGGTCCCATGTGGTGGCACAGGCCCCCTTGAGT...TAGACTGTAAACCTCTCGAGGGCAGGGACCACACCCTGTACTGTTCTGTGTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp GAATTCAGGTCTGAGTGTCCAGGAAAGGGGGTGAATTTCATAACCGCCTGTGACGGCCTTGCTGCCGCATaGGTTCTGACGGACATCCCC +
Preference number: 4 (lower is better)
Translates to: EFRSECPGKGVNFITACDGLAAA*VLTDIP
Trigger: GGGGATGTCCGTCAGAACCCATGCGGCAGCAAGGCC...GTCACAGGCGGTTATGAAATTCACCCCCTTTCCTGGACACTCAGACCTGAATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp TACAGGAGCTGGAAGGTGTTTGGGGTCAGACCCCAATACTCCAAGTACACTAAGGTCTCCAGGTCCACCTaGGGACCCTTCAGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: YRSWKVFGVRPQYSKYTKVSRST*GPFSLL
Trigger: GAGCAGGCTGAAGGGTCCCCAGGTGGACCTGGAGAC...CTTAGTGTACTTGGAGTATTGGGGTCTGACCCCAAACACCTTCCAGCTCCTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp AAGGACAAGGGGGAGGGACAGCAGCAGAGGGGAATTGCAGAGCCCAGCTGGAGAAGATCAGCCGGCGTTTaGAGTGGTAGAAATCTGTCA +
Preference number: 4 (lower is better)
Translates to: KDKGEGQQQRGIAEPSWRRSAGV*SGRNLS
Trigger: TGACAGATTTCTACCACTCCAAACGCCGGCTGATCT...TCTCCAGCTGGGCTCTGCAATTCCCCTCTGCTGCTGTCCCTCCCCCTTGTCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp AAGGACAAGGGGGAGGGACAGCAGCAGAGGGGAATTGCAGAGCCCAGCTGGAGAGTATGTTACAGGAGCTaGAAGGTGTTTGGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: KDKGEGQQQRGIAEPSWRVCYRS*KVFGVR
Trigger: TCTGACCCCAAACACCTTCCAGCTCCTGTAACATAC...TCTCCAGCTGGGCTCTGCAATTCCCCTCTGCTGCTGTCCCTCCCCCTTGTCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp GATGTAGAGCGGGCCTTTGAGGCCCTCGCGCTTCCAGGACTGCAGGCTTCCTGTCAGAAGAAATCCCTGTaGTTGCAGCAGCTGAAAACA +
Preference number: 4 (lower is better)
Translates to: DVERAFEALALPGLQASCQKKSL*LQQLKT
Trigger: TGTTTTCAGCTGCTGCAACCACAGGGATTTCTTCTG...ACAGGAAGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448526.6
CDS-3UTR CCA 90 bp CAGTGCCTCCAGGGGCTCAACGTTAGTGCCAGGAAAGACAACTACTCCCAGCCCCAGCCGGTTCTGACATaGCGCCTGAACAGAAGAAAT +
Preference number: 4 (lower is better)
Translates to: QCLQGLNVSARKDNYSQPQPVLT*RLNRRN
Trigger: ATTTCTTCTGTTCAGGCGCCATGTCAGAACCGGCTG...GGGCTGGGAGTAGTTGTCTTTCCTGGCACTAACGTTGAGCCCCTGGAGGCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448526.6
CDS-3UTR TCA 90 bp GGGTCAGACCCCAATACTCCAAGTACACTAAGCACTTCAGTGCCTCCAGGGGCTCCAGTGGTGTCTCGGTaGCAAAGTCGAAGTTCCATC +
Preference number: 4 (lower is better)
Translates to: GSDPNTPSTLSTSVPPGAPVVSR*QSRSSI
Trigger: GATGGAACTTCGACTTTGTCACCGAGACACCACTGG...AGCCCCTGGAGGCACTGAAGTGCTTAGTGTACTTGGAGTATTGGGGTCTGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR TCA 90 bp GACACAGAACAGTACAGGGTGTGGTCCCTGCCCTCGAGAGGTTTACAGTCTAGGCCAGTGGTGTCTCGGTaGCAAAGTCGAAGTTCCATC +
Preference number: 4 (lower is better)
Translates to: DTEQYRVWSLPSRGLQSRPVVSR*QSRSSI
Trigger: GATGGAACTTCGACTTTGTCACCGAGACACCACTGG...CCTAGACTGTAAACCTCTCGAGGGCAGGGACCACACCCTGTACTGTTCTGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR TCA 90 bp GAATTCAGGTCTGAGTGTCCAGGAAAGGGGGTGAATTTCATAACCGCCTGTGACCGCCGTTTTCGACCCTaGGAGTCTCCAGGTCCACCT +
Preference number: 4 (lower is better)
Translates to: EFRSECPGKGVNFITACDRRFRP*ESPGPP
Trigger: AGGTGGACCTGGAGACTCTCAGGGTCGAAAACGGCG...GTCACAGGCGGTTATGAAATTCACCCCCTTTCCTGGACACTCAGACCTGAATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR TCA 90 bp AGGAGCTGGAAGGTGTTTGGGGTCAGACCCCAATACTCCAAGTACACTAAGCACGAAAAGGCTCAACACTaGGACGGGCTCCCCAGTGCA +
Preference number: 4 (lower is better)
Translates to: RSWKVFGVRPQYSKYTKHEKAQH*DGLPSA
Trigger: TGCACTGGGGAGCCCGTCTCAGTGTTGAGCCTTTTC...GTGCTTAGTGTACTTGGAGTATTGGGGTCTGACCCCAAACACCTTCCAGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR TCA 90 bp GAATTCAGGTCTGAGTGTCCAGGAAAGGGGGTGAATTTCATAACCGCCTGTGACGAGGGATGGGGTGGATaGGGAAGGTCGCTGGACGAT +
Preference number: 4 (lower is better)
Translates to: EFRSECPGKGVNFITACDEGWGG*GRSLDD
Trigger: ATCGTCCAGCGACCTTCCTCATCCACCCCATCCCTC...GTCACAGGCGGTTATGAAATTCACCCCCTTTCCTGGACACTCAGACCTGAATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp CACCTGCTGTATATTCAGCATTGTGGGAGGAGCTGTGAAAGACACAGAACAGTAGGGGACCCTTCAGCCTaGTCCCCTGAGCGAGGCACA +
Preference number: 4 (lower is better)
Translates to: HLLYIQHCGRSCERHRTVGDPSA*SPERGT
Trigger: TGTGCCTCGCTCAGGGGAGCAGGCTGAAGGGTCCCC...TACTGTTCTGTGTCTTTCACAGCTCCTCCCACAATGCTGAATATACAGCAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp AGGAGCTGGAAGGTGTTTGGGGTCAGACCCCAATACTCCAAGTACACTAAGCACCTCAGCCCTAGGCTGTaGTCACTTCAGGGTCACCCT +
Preference number: 4 (lower is better)
Translates to: RSWKVFGVRPQYSKYTKHLSPRL*SLQGHP
Trigger: AGGGTGACCCTGAAGTGAGCACAGCCTAGGGCTGAG...GTGCTTAGTGTACTTGGAGTATTGGGGTCTGACCCCAAACACCTTCCAGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp GGGTCAGACCCCAATACTCCAAGTACACTAAGCACTTCAGTGCCTCCAGGGGCTATTGCAGAGCCCAGCTaGAGAAAAAGGGTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: GSDPNTPSTLSTSVPPGAIAEPS*RKRVAG
Trigger: CCCAGCTACCCTTTTTCTCCAGCTGGGCTCTGCAAT...AGCCCCTGGAGGCACTGAAGTGCTTAGTGTACTTGGAGTATTGGGGTCTGACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp AAGACACAGAACAGTACAGGGTGTGGTCCCTGCCCTCGAGAGGTTTACAGTCTACCATATGAGCCCACGTaGCATGCCCTGTCCATAGCC +
Preference number: 4 (lower is better)
Translates to: KTQNSTGCGPCPREVYSLPYEPT*HALSIA
Trigger: GGCTATGGACAGGGCATGCCACGTGGGCTCATATGG...TAGACTGTAAACCTCTCGAGGGCAGGGACCACACCCTGTACTGTTCTGTGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp AGGAGCTGGAAGGTGTTTGGGGTCAGACCCCAATACTCCAAGTACACTAAGCACCCATATGAGCCCACGTaGCATGCCCTGTCCATAGCC +
Preference number: 4 (lower is better)
Translates to: RSWKVFGVRPQYSKYTKHPYEPT*HALSIA
Trigger: GGCTATGGACAGGGCATGCCACGTGGGCTCATATGG...GTGCTTAGTGTACTTGGAGTATTGGGGTCTGACCCCAAACACCTTCCAGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp GACACAGAACAGTACAGGGTGTGGTCCCTGCCCTCGAGAGGTTTACAGTCTAGGGAGCTGGAAGGTGTTTaGGGTCAGACCCCAATACTC +
Preference number: 4 (lower is better)
Translates to: DTEQYRVWSLPSRGLQSRELEGV*GQTPIL
Trigger: GAGTATTGGGGTCTGACCCCAAACACCTTCCAGCTC...CCTAGACTGTAAACCTCTCGAGGGCAGGGACCACACCCTGTACTGTTCTGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp CACCTGCTGTATATTCAGCATTGTGGGAGGAGCTGTGAAAGACACAGAACAGTACACGGGCCTCCTGGATaGAGCCCGCCATTAGCGCAT +
Preference number: 4 (lower is better)
Translates to: HLLYIQHCGRSCERHRTVHGPPG*SPPLAH
Trigger: ATGCGCTAATGGCGGGCTGCATCCAGGAGGCCCGTG...TACTGTTCTGTGTCTTTCACAGCTCCTCCCACAATGCTGAATATACAGCAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp GACACAGAACAGTACAGGGTGTGGTCCCTGCCCTCGAGAGGTTTACAGTCTAGGGGTAGAAATCTGTCATaGTGGTCTGCCGCCGTTTTC +
Preference number: 4 (lower is better)
Translates to: DTEQYRVWSLPSRGLQSRGRNLS*WSAAVF
Trigger: GAAAACGGCGGCAGACCAGCATGACAGATTTCTACC...CCTAGACTGTAAACCTCTCGAGGGCAGGGACCACACCCTGTACTGTTCTGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp GAATTCAGGTCTGAGTGTCCAGGAAAGGGGGTGAATTTCATAACCGCCTGTGACCTCAGCCCTAGGCTGTaGTCACTTCAGGGTCACCCT +
Preference number: 4 (lower is better)
Translates to: EFRSECPGKGVNFITACDLSPRL*SLQGHP
Trigger: AGGGTGACCCTGAAGTGAGCACAGCCTAGGGCTGAG...GTCACAGGCGGTTATGAAATTCACCCCCTTTCCTGGACACTCAGACCTGAATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp AAGACACAGAACAGTACAGGGTGTGGTCCCTGCCCTCGAGAGGTTTACAGTCTAAGTGACAGGTCCACATaGTCTTCCTCTGCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: KTQNSTGCGPCPREVYSLSDRST*SSSAVP
Trigger: GGGGACAGCAGAGGAAGACCATGTGGACCTGTCACT...TAGACTGTAAACCTCTCGAGGGCAGGGACCACACCCTGTACTGTTCTGTGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp AGGAGCTGGAAGGTGTTTGGGGTCAGACCCCAATACTCCAAGTACACTAAGCACAGTGACAGGTCCACATaGTCTTCCTCTGCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: RSWKVFGVRPQYSKYTKHSDRST*SSSAVP
Trigger: GGGGACAGCAGAGGAAGACCATGTGGACCTGTCACT...GTGCTTAGTGTACTTGGAGTATTGGGGTCTGACCCCAAACACCTTCCAGCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp GGGTCAGACCCCAATACTCCAAGTACACTAAGCACTTCAGTGCCTCCAGGGGCTATTAGGGCTTCCTCTTaGAGAAGATCAGCCGGCGTT +
Preference number: 4 (lower is better)
Translates to: GSDPNTPSTLSTSVPPGAIRASS*RRSAGV
Trigger: AACGCCGGCTGATCTTCTCCAAGAGGAAGCCCTAAT...AGCCCCTGGAGGCACTGAAGTGCTTAGTGTACTTGGAGTATTGGGGTCTGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp GACACAGAACAGTACAGGGTGTGGTCCCTGCCCTCGAGAGGTTTACAGTCTAGGATTAGGGCTTCCTCTTaGAGAAGATCAGCCGGCGTT +
Preference number: 4 (lower is better)
Translates to: DTEQYRVWSLPSRGLQSRIRASS*RRSAGV
Trigger: AACGCCGGCTGATCTTCTCCAAGAGGAAGCCCTAAT...CCTAGACTGTAAACCTCTCGAGGGCAGGGACCACACCCTGTACTGTTCTGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR TCA 90 bp CACCTGCTGTATATTCAGCATTGTGGGAGGAGCTGTGAAAGACACAGAACAGTATTCAGCCTGCTCCCCTaGGCGAGGCACAAGGGTACA +
Preference number: 4 (lower is better)
Translates to: HLLYIQHCGRSCERHRTVFSLLP*ARHKGT
Trigger: TGTACCCTTGTGCCTCGCTCAGGGGAGCAGGCTGAA...TACTGTTCTGTGTCTTTCACAGCTCCTCCCACAATGCTGAATATACAGCAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR TCA 90 bp TACAGGAGCTGGAAGGTGTTTGGGGTCAGACCCCAATACTCCAAGTACACTAAGTTTCATAACCGCCTGTaGCAGCGATGGGAAGGAGCC +
Preference number: 4 (lower is better)
Translates to: YRSWKVFGVRPQYSKYTKFHNRL*QRWEGA
Trigger: GGCTCCTTCCCATCGCTGTCACAGGCGGTTATGAAA...CTTAGTGTACTTGGAGTATTGGGGTCTGACCCCAAACACCTTCCAGCTCCTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR TCA 90 bp GGGTCAGACCCCAATACTCCAAGTACACTAAGCACTTCAGTGCCTCCAGGGGCTAAAAGAATTCAGGTCTaGGTGTCCAGGAAAGGGGGT +
Preference number: 4 (lower is better)
Translates to: GSDPNTPSTLSTSVPPGAKRIQV*VSRKGG
Trigger: ACCCCCTTTCCTGGACACTCAGACCTGAATTCTTTT...AGCCCCTGGAGGCACTGAAGTGCTTAGTGTACTTGGAGTATTGGGGTCTGACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR TCA 90 bp CACCTGCTGTATATTCAGCATTGTGGGAGGAGCTGTGAAAGACACAGAACAGTAGAGGGATGGGGTGGATaGGGAAGGTCGCTGGACGAT +
Preference number: 4 (lower is better)
Translates to: HLLYIQHCGRSCERHRTVEGWGG*GRSLDD
Trigger: ATCGTCCAGCGACCTTCCTCATCCACCCCATCCCTC...TACTGTTCTGTGTCTTTCACAGCTCCTCCCACAATGCTGAATATACAGCAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR TCA 90 bp GGGTCAGACCCCAATACTCCAAGTACACTAAGCACTTCAGTGCCTCCAGGGGCTTTGTGGGAGGAGCTGTaGAAGACACAGAACAGTACA +
Preference number: 4 (lower is better)
Translates to: GSDPNTPSTLSTSVPPGALWEEL*KTQNST
Trigger: TGTACTGTTCTGTGTCTTTCACAGCTCCTCCCACAA...AGCCCCTGGAGGCACTGAAGTGCTTAGTGTACTTGGAGTATTGGGGTCTGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp CACCTGCTGTATATTCAGCATTGTGGGAGGAGCTGTGAAAGACACAGAACAGTATCCTCTGCTGTCCCCTaGAGCAGAGCAGGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: HLLYIQHCGRSCERHRTVSSAVP*SRAGEV
Trigger: CACCTCACCTGCTCTGCTGCAGGGGACAGCAGAGGA...TACTGTTCTGTGTCTTTCACAGCTCCTCCCACAATGCTGAATATACAGCAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp CACCTGCTGTATATTCAGCATTGTGGGAGGAGCTGTGAAAGACACAGAACAGTAACCCCACCTTCCCCCTaGCTTCACAAGACAGAGGGG +
Preference number: 4 (lower is better)
Translates to: HLLYIQHCGRSCERHRTVTPPSP*LHKTEG
Trigger: CCCCTCTGTCTTGTGAAGGCAGGGGGAAGGTGGGGT...TACTGTTCTGTGTCTTTCACAGCTCCTCCCACAATGCTGAATATACAGCAGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp CACCTGCTGTATATTCAGCATTGTGGGAGGAGCTGTGAAAGACACAGAACAGTAACTCAAGGGGGCCTGTaGCACCACATGGGACCCTCA +
Preference number: 4 (lower is better)
Translates to: HLLYIQHCGRSCERHRTVTQGGL*HHMGPS
Trigger: TGAGGGTCCCATGTGGTGGCACAGGCCCCCTTGAGT...TACTGTTCTGTGTCTTTCACAGCTCCTCCCACAATGCTGAATATACAGCAGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp TTACAGTCTAGGTGGAGAAACGGGAACCAGGACACATGGGGAGCCGAGAGAAAAGAAGTCACCCTCCAGTaGTGTCTCGGTGACAAAGTC +
Preference number: 4 (lower is better)
Translates to: LQSRWRNGNQDTWGAERKEVTLQ*CLGDKV
Trigger: GACTTTGTCACCGAGACACCACTGGAGGGTGACTTC...TTTTCTCTCGGCTCCCCATGTGTCCTGGTTCCCGTTTCTCCACCTAGACTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp AGGAGCTGGAAGGTGTTTGGGGTCAGACCCCAATACTCCAAGTACACTAAGCACGAAGTCACCCTCCAGTaGTGTCTCGGTGACAAAGTC +
Preference number: 4 (lower is better)
Translates to: RSWKVFGVRPQYSKYTKHEVTLQ*CLGDKV
Trigger: GACTTTGTCACCGAGACACCACTGGAGGGTGACTTC...GTGCTTAGTGTACTTGGAGTATTGGGGTCTGACCCCAAACACCTTCCAGCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp GGGTCAGACCCCAATACTCCAAGTACACTAAGCACTTCAGTGCCTCCAGGGGCTGAGAAAAAGGGTAGCTaGGGCTCCTCAAAAGGTACA +
Preference number: 4 (lower is better)
Translates to: GSDPNTPSTLSTSVPPGAEKKGS*GSSKGT
Trigger: TGTACCTTTTGAGGAGCCCCAGCTACCCTTTTTCTC...AGCCCCTGGAGGCACTGAAGTGCTTAGTGTACTTGGAGTATTGGGGTCTGACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR TCA 90 bp TTACAGTCTAGGTGGAGAAACGGGAACCAGGACACATGGGGAGCCGAGAGAAAACTAATCAAAGTGCAATaGACTGGGGAGGGATGGGGT +
Preference number: 4 (lower is better)
Translates to: LQSRWRNGNQDTWGAERKLIKVQ*TGEGWG
Trigger: ACCCCATCCCTCCCCAGTTCATTGCACTTTGATTAG...TTTTCTCTCGGCTCCCCATGTGTCCTGGTTCCCGTTTCTCCACCTAGACTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp TTTCATAAAATAAAAATGCCCAGCACTCTTAGGAACCTCTCATTCAACCGCCTAGCAGAGCAGGTGAGGTaGCAGGCCGCCTGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: FHKIKMPSTLRNLSFNRLAEQVR*QAACLL
Trigger: GAGGAGGCAGGCGGCCTGGCACCTCACCTGCTCTGC...TAGGCGGTTGAATGAGAGGTTCCTAAGAGTGCTGGGCATTTTTATTTTATGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp AGGAGCTGGAAGGTGTTTGGGGTCAGACCCCAATACTCCAAGTACACTAAGCACGGTAGAAATCTGTCATaGTGGTCTGCCGCCGTTTTC +
Preference number: 4 (lower is better)
Translates to: RSWKVFGVRPQYSKYTKHGRNLS*WSAAVF
Trigger: GAAAACGGCGGCAGACCAGCATGACAGATTTCTACC...GTGCTTAGTGTACTTGGAGTATTGGGGTCTGACCCCAAACACCTTCCAGCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp TTACAGTCTAGGTGGAGAAACGGGAACCAGGACACATGGGGAGCCGAGAGAAAAGGTAGAAATCTGTCATaGTGGTCTGCCGCCGTTTTC +
Preference number: 4 (lower is better)
Translates to: LQSRWRNGNQDTWGAERKGRNLS*WSAAVF
Trigger: GAAAACGGCGGCAGACCAGCATGACAGATTTCTACC...TTTTCTCTCGGCTCCCCATGTGTCCTGGTTCCCGTTTCTCCACCTAGACTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp TTTCATAAAATAAAAATGCCCAGCACTCTTAGGAACCTCTCATTCAACCGCCTACTGCTCGCTGTCCACTaGGCCGAAGAGGCGGCGGCA +
Preference number: 4 (lower is better)
Translates to: FHKIKMPSTLRNLSFNRLLLAVH*AEEAAA
Trigger: TGCCGCCGCCTCTTCGGCCCAGTGGACAGCGAGCAG...TAGGCGGTTGAATGAGAGGTTCCTAAGAGTGCTGGGCATTTTTATTTTATGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp AAGACACAGAACAGTACAGGGTGTGGTCCCTGCCCTCGAGAGGTTTACAGTCTAAGAAATCTGTCATGCTaGTCTGCCGCCGTTTTCGAC +
Preference number: 4 (lower is better)
Translates to: KTQNSTGCGPCPREVYSLRNLSC*SAAVFD
Trigger: GTCGAAAACGGCGGCAGACCAGCATGACAGATTTCT...TAGACTGTAAACCTCTCGAGGGCAGGGACCACACCCTGTACTGTTCTGTGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp GAATTCAGGTCTGAGTGTCCAGGAAAGGGGGTGAATTTCATAACCGCCTGTGACATTGCAGAGCCCAGCTaGAGAAAAAGGGTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: EFRSECPGKGVNFITACDIAEPS*RKRVAG
Trigger: CCCAGCTACCCTTTTTCTCCAGCTGGGCTCTGCAAT...GTCACAGGCGGTTATGAAATTCACCCCCTTTCCTGGACACTCAGACCTGAATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp GAATTCAGGTCTGAGTGTCCAGGAAAGGGGGTGAATTTCATAACCGCCTGTGACCAAAGTGCAATGAACTaGGGAGGGATGGGGTGGATG +
Preference number: 4 (lower is better)
Translates to: EFRSECPGKGVNFITACDQSAMN*GGMGWM
Trigger: CATCCACCCCATCCCTCCCCAGTTCATTGCACTTTG...GTCACAGGCGGTTATGAAATTCACCCCCTTTCCTGGACACTCAGACCTGAATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp CACCTGCTGTATATTCAGCATTGTGGGAGGAGCTGTGAAAGACACAGAACAGTACCATATGAGCCCACGTaGCATGCCCTGTCCATAGCC +
Preference number: 4 (lower is better)
Translates to: HLLYIQHCGRSCERHRTVPYEPT*HALSIA
Trigger: GGCTATGGACAGGGCATGCCACGTGGGCTCATATGG...TACTGTTCTGTGTCTTTCACAGCTCCTCCCACAATGCTGAATATACAGCAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
3UTR CAA 72 bp AGTCCAGGCCAGTATGTTACAGGAGCTGGAAGGTGTTaGGGGTCAGACCCCAATACTCCAAGTACACTAAGC +
Preference number: 4 (lower is better)
Translates to: SPGQYVTGAGRC*GSDPNTPSTLS
Trigger: GCTTAGTGTACTTGGAGTATTGGGGTCTGACCCCAAACACCTTCCAGCTCCTGTAACATACTGGCCTGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR TCA 90 bp TTTCATAAAATAAAAATGCCCAGCACTCTTAGGAACCTCTCATTCAACCGCCTACTGCCGCATGGGTTCTaGCGGACATCCCCAGCCGGT +
Preference number: 4 (lower is better)
Translates to: FHKIKMPSTLRNLSFNRLLPHGF*RTSPAG
Trigger: ACCGGCTGGGGATGTCCGTCAGAACCCATGCGGCAG...TAGGCGGTTGAATGAGAGGTTCCTAAGAGTGCTGGGCATTTTTATTTTATGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR TCA 90 bp TTTCATAAAATAAAAATGCCCAGCACTCTTAGGAACCTCTCATTCAACCGCCTATGTAGAGCGGGCCTTTaGGGCCCTCGCGCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: FHKIKMPSTLRNLSFNRLCRAGL*GPRASR
Trigger: CCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACA...TAGGCGGTTGAATGAGAGGTTCCTAAGAGTGCTGGGCATTTTTATTTTATGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR TCA 90 bp CACCTGCTGTATATTCAGCATTGTGGGAGGAGCTGTGAAAGACACAGAACAGTATTTCATAACCGCCTGTaGCAGCGATGGGAAGGAGCC +
Preference number: 4 (lower is better)
Translates to: HLLYIQHCGRSCERHRTVFHNRL*QRWEGA
Trigger: GGCTCCTTCCCATCGCTGTCACAGGCGGTTATGAAA...TACTGTTCTGTGTCTTTCACAGCTCCTCCCACAATGCTGAATATACAGCAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR TCA 90 bp AGGAGCTGGAAGGTGTTTGGGGTCAGACCCCAATACTCCAAGTACACTAAGCACTTGTGGGAGGAGCTGTaGAAGACACAGAACAGTACA +
Preference number: 4 (lower is better)
Translates to: RSWKVFGVRPQYSKYTKHLWEEL*KTQNST
Trigger: TGTACTGTTCTGTGTCTTTCACAGCTCCTCCCACAA...GTGCTTAGTGTACTTGGAGTATTGGGGTCTGACCCCAAACACCTTCCAGCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp TTTCATAAAATAAAAATGCCCAGCACTCTTAGGAACCTCTCATTCAACCGCCTAGGGGACCCTTCAGCCTaGTCCCCTGAGCGAGGCACA +
Preference number: 4 (lower is better)
Translates to: FHKIKMPSTLRNLSFNRLGDPSA*SPERGT
Trigger: TGTGCCTCGCTCAGGGGAGCAGGCTGAAGGGTCCCC...TAGGCGGTTGAATGAGAGGTTCCTAAGAGTGCTGGGCATTTTTATTTTATGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp AGGAGCTGGAAGGTGTTTGGGGTCAGACCCCAATACTCCAAGTACACTAAGCACAGATCAGCCGGCGTTTaGAGTGGTAGAAATCTGTCA +
Preference number: 4 (lower is better)
Translates to: RSWKVFGVRPQYSKYTKHRSAGV*SGRNLS
Trigger: TGACAGATTTCTACCACTCCAAACGCCGGCTGATCT...GTGCTTAGTGTACTTGGAGTATTGGGGTCTGACCCCAAACACCTTCCAGCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp TTACAGTCTAGGTGGAGAAACGGGAACCAGGACACATGGGGAGCCGAGAGAAAAAGATCAGCCGGCGTTTaGAGTGGTAGAAATCTGTCA +
Preference number: 4 (lower is better)
Translates to: LQSRWRNGNQDTWGAERKRSAGV*SGRNLS
Trigger: TGACAGATTTCTACCACTCCAAACGCCGGCTGATCT...TTTTCTCTCGGCTCCCCATGTGTCCTGGTTCCCGTTTCTCCACCTAGACTGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp AAGACACAGAACAGTACAGGGTGTGGTCCCTGCCCTCGAGAGGTTTACAGTCTAGAGAAAAAGGGTAGCTaGGGCTCCTCAAAAGGTACA +
Preference number: 4 (lower is better)
Translates to: KTQNSTGCGPCPREVYSLEKKGS*GSSKGT
Trigger: TGTACCTTTTGAGGAGCCCCAGCTACCCTTTTTCTC...TAGACTGTAAACCTCTCGAGGGCAGGGACCACACCCTGTACTGTTCTGTGTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp TTACAGTCTAGGTGGAGAAACGGGAACCAGGACACATGGGGAGCCGAGAGAAAAGTATGTTACAGGAGCTaGAAGGTGTTTGGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: LQSRWRNGNQDTWGAERKVCYRS*KVFGVR
Trigger: TCTGACCCCAAACACCTTCCAGCTCCTGTAACATAC...TTTTCTCTCGGCTCCCCATGTGTCCTGGTTCCCGTTTCTCCACCTAGACTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR TCA 90 bp GAATTCAGGTCTGAGTGTCCAGGAAAGGGGGTGAATTTCATAACCGCCTGTGACTTGTGGGAGGAGCTGTaGAAGACACAGAACAGTACA +
Preference number: 4 (lower is better)
Translates to: EFRSECPGKGVNFITACDLWEEL*KTQNST
Trigger: TGTACTGTTCTGTGTCTTTCACAGCTCCTCCCACAA...GTCACAGGCGGTTATGAAATTCACCCCCTTTCCTGGACACTCAGACCTGAATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp TTTCATAAAATAAAAATGCCCAGCACTCTTAGGAACCTCTCATTCAACCGCCTACACGGGCCTCCTGGATaGAGCCCGCCATTAGCGCAT +
Preference number: 4 (lower is better)
Translates to: FHKIKMPSTLRNLSFNRLHGPPG*SPPLAH
Trigger: ATGCGCTAATGGCGGGCTGCATCCAGGAGGCCCGTG...TAGGCGGTTGAATGAGAGGTTCCTAAGAGTGCTGGGCATTTTTATTTTATGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR GCA 90 bp TTTCATAAAATAAAAATGCCCAGCACTCTTAGGAACCTCTCATTCAACCGCCTATCGCGCTTCCAGGACTaGAGGCTTCCTGTGGGCGGA +
Preference number: 4 (lower is better)
Translates to: FHKIKMPSTLRNLSFNRLSRFQD*RLPVGG
Trigger: TCCGCCCACAGGAAGCCTGCAGTCCTGGAAGCGCGA...TAGGCGGTTGAATGAGAGGTTCCTAAGAGTGCTGGGCATTTTTATTTTATGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp TTTCATAAAATAAAAATGCCCAGCACTCTTAGGAACCTCTCATTCAACCGCCTAGGCCTTGCTGCCGCATaGGTTCTGACGGACATCCCC +
Preference number: 4 (lower is better)
Translates to: FHKIKMPSTLRNLSFNRLGLAAA*VLTDIP
Trigger: GGGGATGTCCGTCAGAACCCATGCGGCAGCAAGGCC...TAGGCGGTTGAATGAGAGGTTCCTAAGAGTGCTGGGCATTTTTATTTTATGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp GAATTCAGGTCTGAGTGTCCAGGAAAGGGGGTGAATTTCATAACCGCCTGTGACGTATGTTACAGGAGCTaGAAGGTGTTTGGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: EFRSECPGKGVNFITACDVCYRS*KVFGVR
Trigger: TCTGACCCCAAACACCTTCCAGCTCCTGTAACATAC...GTCACAGGCGGTTATGAAATTCACCCCCTTTCCTGGACACTCAGACCTGAATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp TACAGGAGCTGGAAGGTGTTTGGGGTCAGACCCCAATACTCCAAGTACACTAAGGTATGTTACAGGAGCTaGAAGGTGTTTGGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: YRSWKVFGVRPQYSKYTKVCYRS*KVFGVR
Trigger: TCTGACCCCAAACACCTTCCAGCTCCTGTAACATAC...CTTAGTGTACTTGGAGTATTGGGGTCTGACCCCAAACACCTTCCAGCTCCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR TCA 90 bp TTTCATAAAATAAAAATGCCCAGCACTCTTAGGAACCTCTCATTCAACCGCCTATTCAGCCTGCTCCCCTaGGCGAGGCACAAGGGTACA +
Preference number: 4 (lower is better)
Translates to: FHKIKMPSTLRNLSFNRLFSLLP*ARHKGT
Trigger: TGTACCCTTGTGCCTCGCTCAGGGGAGCAGGCTGAA...TAGGCGGTTGAATGAGAGGTTCCTAAGAGTGCTGGGCATTTTTATTTTATGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp TTTCATAAAATAAAAATGCCCAGCACTCTTAGGAACCTCTCATTCAACCGCCTACAGCCGGTTCTGACATaGCGCCTGAAAACAGGCAGC +
Preference number: 4 (lower is better)
Translates to: FHKIKMPSTLRNLSFNRLQPVLT*RLKTGS
Trigger: GCTGCCTGTTTTCAGGCGCCATGTCAGAACCGGCTG...TAGGCGGTTGAATGAGAGGTTCCTAAGAGTGCTGGGCATTTTTATTTTATGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000615513.4
CDS-3UTR TCA 90 bp TTTCATAAAATAAAAATGCCCAGCACTCTTAGGAACCTCTCATTCAACCGCCTACCAGTGGTGTCTCGGTaGCAAAGTCGAAGTTCCATC +
Preference number: 4 (lower is better)
Translates to: FHKIKMPSTLRNLSFNRLPVVSR*QSRSSI
Trigger: GATGGAACTTCGACTTTGTCACCGAGACACCACTGG...TAGGCGGTTGAATGAGAGGTTCCTAAGAGTGCTGGGCATTTTTATTTTATGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp TTTCATAAAATAAAAATGCCCAGCACTCTTAGGAACCTCTCATTCAACCGCCTAGAAGTCACCCTCCAGTaGTGTCTCGGTGACAAAGTC +
Preference number: 4 (lower is better)
Translates to: FHKIKMPSTLRNLSFNRLEVTLQ*CLGDKV
Trigger: GACTTTGTCACCGAGACACCACTGGAGGGTGACTTC...TAGGCGGTTGAATGAGAGGTTCCTAAGAGTGCTGGGCATTTTTATTTTATGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp TTTCATAAAATAAAAATGCCCAGCACTCTTAGGAACCTCTCATTCAACCGCCTACAAAGTGCAATGAACTaGGGAGGGATGGGGTGGATG +
Preference number: 4 (lower is better)
Translates to: FHKIKMPSTLRNLSFNRLQSAMN*GGMGWM
Trigger: CATCCACCCCATCCCTCCCCAGTTCATTGCACTTTG...TAGGCGGTTGAATGAGAGGTTCCTAAGAGTGCTGGGCATTTTTATTTTATGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR TCA 90 bp TTTCATAAAATAAAAATGCCCAGCACTCTTAGGAACCTCTCATTCAACCGCCTACTAATCAAAGTGCAATaGACTGGGGAGGGATGGGGT +
Preference number: 4 (lower is better)
Translates to: FHKIKMPSTLRNLSFNRLLIKVQ*TGEGWG
Trigger: ACCCCATCCCTCCCCAGTTCATTGCACTTTGATTAG...TAGGCGGTTGAATGAGAGGTTCCTAAGAGTGCTGGGCATTTTTATTTTATGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp TTTCATAAAATAAAAATGCCCAGCACTCTTAGGAACCTCTCATTCAACCGCCTAAGAAATCTGTCATGCTaGTCTGCCGCCGTTTTCGAC +
Preference number: 4 (lower is better)
Translates to: FHKIKMPSTLRNLSFNRLRNLSC*SAAVFD
Trigger: GTCGAAAACGGCGGCAGACCAGCATGACAGATTTCT...TAGGCGGTTGAATGAGAGGTTCCTAAGAGTGCTGGGCATTTTTATTTTATGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp TTTCATAAAATAAAAATGCCCAGCACTCTTAGGAACCTCTCATTCAACCGCCTAATTAGGGCTTCCTCTTaGAGAAGATCAGCCGGCGTT +
Preference number: 4 (lower is better)
Translates to: FHKIKMPSTLRNLSFNRLIRASS*RRSAGV
Trigger: AACGCCGGCTGATCTTCTCCAAGAGGAAGCCCTAAT...TAGGCGGTTGAATGAGAGGTTCCTAAGAGTGCTGGGCATTTTTATTTTATGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CCA 90 bp TTTCATAAAATAAAAATGCCCAGCACTCTTAGGAACCTCTCATTCAACCGCCTAAGATCAGCCGGCGTTTaGAGTGGTAGAAATCTGTCA +
Preference number: 4 (lower is better)
Translates to: FHKIKMPSTLRNLSFNRLRSAGV*SGRNLS
Trigger: TGACAGATTTCTACCACTCCAAACGCCGGCTGATCT...TAGGCGGTTGAATGAGAGGTTCCTAAGAGTGCTGGGCATTTTTATTTTATGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS CCA 90 bp CTCGCGGACACGCAGGGACACACGCGGGCACGCTTGGCTCGGCTCTaGGCCGCCGGCCCGGGGTCCCCTGTTGTCTGCCGCCGCTCTCTC +
Preference number: 5 (lower is better)
Translates to: LADTQGHTRARLARL*AAGPGSPVVCRRSL
Trigger: GAGAGAGCGGCGGCAGACAACAGGGGACCCCGGGCCGGCGGCCCAGAGCCGAGCCAAGCGTGCCCGCGTGTGTCCCTGCGTGTCCGCGAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405375.5
ENST00000462537.3
ENST00000478800.1
CDS GCA 90 bp CGCTTGGCTCGGCTCTGGGCCGCCGGCCCGGGGTCCCCTGTTGTCTaGCGCCGCTCTCTCACCTCCTCTGAGTGCCTCGGTGCCTCGGCG +
Preference number: 5 (lower is better)
Translates to: RLARLWAAGPGSPVV*RRSLTSSECLGASA
Trigger: CGCCGAGGCACCGAGGCACTCAGAGGAGGTGAGAGAGCGGCGGCAGACAACAGGGGACCCCGGGCCGGCGGCCCAGAGCCGAGCCAAGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405375.5
ENST00000462537.3
ENST00000478800.1
CDS CCA 90 bp GAACACGCATCCTCGCGGACACGCAGGGACACACGCGGGCACGCTTaGCTCGGCTCTGGGCCGCCGGCCCGGGGTCCCCTGTTGTCTGCC +
Preference number: 5 (lower is better)
Translates to: EHASSRTRRDTRGHA*LGSGPPARGPLLSA
Trigger: GGCAGACAACAGGGGACCCCGGGCCGGCGGCCCAGAGCCGAGCCAAGCGTGCCCGCGTGTGTCCCTGCGTGTCCGCGAGGATGCGTGTTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405375.5
ENST00000462537.3
ENST00000478800.1
CDS CCA 90 bp CAGGGCCGGGAGGGGGCGCCGGCCTCCAGGAAATCACGCGCGGAGTaGGAGGTGCGTGGGCAGAGCCTCGGACCGCTGGAGGGAGTAGTG +
Preference number: 5 (lower is better)
Translates to: QGREGAPASRKSRAE*EVRGQSLGPLEGVV
Trigger: CACTACTCCCTCCAGCGGTCCGAGGCTCTGCCCACGCACCTCCCACTCCGCGCGTGATTTCCTGGAGGCCGGCGCCCCCTCCCGGCCCTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462537.3
CDS GCA 90 bp CCGGGGTCCCCTGTTGTCTGCCGCCGCTCTCTCACCTCCTCTGAGTaGCTCGGTGCCTCGGCGAATCCGCGCCCAGCTCCGGCTCCACAA +
Preference number: 5 (lower is better)
Translates to: PGSPVVCRRSLTSSE*LGASANPRPAPAPQ
Trigger: TTGTGGAGCCGGAGCTGGGCGCGGATTCGCCGAGGCACCGAGGCACTCAGAGGAGGTGAGAGAGCGGCGGCAGACAACAGGGGACCCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405375.5
ENST00000478800.1
CDS TCA 90 bp ACTGGGCCGAAGAGGCGGCGGCAGGCCTTGCTGCCGCATGGGTTCTaGCGGACATCCCCAGCCGGTTCTGACATGGCGCCTGCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: TGPKRRRQALLPHGF*RTSPAGSDMAPACS
Trigger: AGAGCAGGCAGGCGCCATGTCAGAACCGGCTGGGGATGTCCGTCAGAACCCATGCGGCAGCAAGGCCTGCCGCCGCCTCTTCGGCCCAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373711.3
CDS TCA 90 bp ACTGGGCCGAAGAGGCGGCGGCAGGCCTTGCTGCCGCATGGGTTCTaGCGGACATCCCCAGCCGGTTCTGACATGGCGCCTGCCGCAGAA +
Preference number: 5 (lower is better)
Translates to: TGPKRRRQALLPHGF*RTSPAGSDMAPAAE
Trigger: TTCTGCGGCAGGCGCCATGTCAGAACCGGCTGGGGATGTCCGTCAGAACCCATGCGGCAGCAAGGCCTGCCGCCGCCTCTTCGGCCCAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405375.5
ENST00000478800.1
CDS GCA 90 bp GCTGCTCGCTGTCCACTGGGCCGAAGAGGCGGCGGCAGGCCTTGCTaGCGCATGGGTTCTGACGGACATCCCCAGCCGGTTCTGACATGG +
Preference number: 5 (lower is better)
Translates to: AARCPLGRRGGGRPC*RMGSDGHPQPVLTW
Trigger: CCATGTCAGAACCGGCTGGGGATGTCCGTCAGAACCCATGCGGCAGCAAGGCCTGCCGCCGCCTCTTCGGCCCAGTGGACAGCGAGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000244741.10
ENST00000373711.3
ENST00000405375.5
ENST00000448526.6
ENST00000459970.1
ENST00000478800.1
ENST00000615513.4
CDS CCA 90 bp GGGGGCGCCGGCCTCCAGGAAATCACGCGCGGAGTGGGAGGTGCGTaGGCAGAGCCTCGGACCGCTGGAGGGAGTAGTGATGAGTCAGTT +
Preference number: 5 (lower is better)
Translates to: GGAGLQEITRGVGGA*AEPRTAGGSSDESV
Trigger: AACTGACTCATCACTACTCCCTCCAGCGGTCCGAGGCTCTGCCCACGCACCTCCCACTCCGCGCGTGATTTCCTGGAGGCCGGCGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462537.3
CDS-3UTR CAA 90 bp AAGGACAAGGGGGAGGGACAGCAGCAGAGGGGAATTGCAGAGCCCAGCTGGAGACACACGCGGGCACGCTaGGCTCGGCTCTGGGCCGCC +
Preference number: 5 (lower is better)
Translates to: KDKGEGQQQRGIAEPSWRHTRAR*ARLWAA
Trigger: GGCGGCCCAGAGCCGAGCCAAGCGTGCCCGCGTGTG...TCTCCAGCTGGGCTCTGCAATTCCCCTCTGCTGCTGTCCCTCCCCCTTGTCCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405375.5
CDS TCA 90 bp ACTGGGCCGAAGAGGCGGCGGCAGGCCTTGCTGCCGCATGGGTTCTaGCGGACATCCCCAGCCGGTTCTGACATGGCGCCTCCTCTGAGT +
Preference number: 5 (lower is better)
Translates to: TGPKRRRQALLPHGF*RTSPAGSDMAPPLS
Trigger: ACTCAGAGGAGGCGCCATGTCAGAACCGGCTGGGGATGTCCGTCAGAACCCATGCGGCAGCAAGGCCTGCCGCCGCCTCTTCGGCCCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244741.10
CDS GCA 90 bp TCAGCTGCTCGCTGTCCACTGGGCCGAAGAGGCGGCGGCAGGCCTTaGTGCCGCATGGGTTCTGACGGACATCCCCAGCCGGTTCTGACA +
Preference number: 5 (lower is better)
Translates to: SAARCPLGRRGGGRP*CRMGSDGHPQPVLT
Trigger: TGTCAGAACCGGCTGGGGATGTCCGTCAGAACCCATGCGGCAGCAAGGCCTGCCGCCGCCTCTTCGGCCCAGTGGACAGCGAGCAGCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000244741.10
ENST00000373711.3
ENST00000405375.5
ENST00000448526.6
ENST00000459970.1
ENST00000478800.1
ENST00000615513.4
CDS TCA 90 bp ACTGGGCCGAAGAGGCGGCGGCAGGCCTTGCTGCCGCATGGGTTCTaGCGGACATCCCCAGCCGGTTCTGACATGGCGCCTGAACAGAAG +
Preference number: 5 (lower is better)
Translates to: TGPKRRRQALLPHGF*RTSPAGSDMAPEQK
Trigger: CTTCTGTTCAGGCGCCATGTCAGAACCGGCTGGGGATGTCCGTCAGAACCCATGCGGCAGCAAGGCCTGCCGCCGCCTCTTCGGCCCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448526.6
ENST00000459970.1
CDS TCA 90 bp ACTGGGCCGAAGAGGCGGCGGCAGGCCTTGCTGCCGCATGGGTTCTaGCGGACATCCCCAGCCGGTTCTGACATGGCGCCTGAAAACAGG +
Preference number: 5 (lower is better)
Translates to: TGPKRRRQALLPHGF*RTSPAGSDMAPENR
Trigger: CCTGTTTTCAGGCGCCATGTCAGAACCGGCTGGGGATGTCCGTCAGAACCCATGCGGCAGCAAGGCCTGCCGCCGCCTCTTCGGCCCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615513.4
CDS CCA 90 bp CAGGCCAAGGCCCCGCACACGCTCCCAGGCGAAGTCACCCTCCAGTaGTGTCTCGGTGACAAAGTCGAAGTTCCATCGCTCACGGGCCTC +
Preference number: 5 (lower is better)
Translates to: QAKAPHTLPGEVTLQ*CLGDKVEVPSLTGL
Trigger: GAGGCCCGTGAGCGATGGAACTTCGACTTTGTCACCGAGACACCACTGGAGGGTGACTTCGCCTGGGAGCGTGTGCGGGGCCTTGGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000244741.10
ENST00000373711.3
ENST00000405375.5
ENST00000448526.6
ENST00000459970.1
ENST00000478800.1
ENST00000615513.4
CDS TCA 90 bp CCCGCACACGCTCCCAGGCGAAGTCACCCTCCAGTGGTGTCTCGGTaGCAAAGTCGAAGTTCCATCGCTCACGGGCCTCCTGGATGCAGC +
Preference number: 5 (lower is better)
Translates to: PAHAPRRSHPPVVSR*QSRSSIAHGPPGCS
Trigger: GCTGCATCCAGGAGGCCCGTGAGCGATGGAACTTCGACTTTGTCACCGAGACACCACTGGAGGGTGACTTCGCCTGGGAGCGTGTGCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000244741.10
ENST00000373711.3
ENST00000405375.5
ENST00000448526.6
ENST00000459970.1
ENST00000478800.1
ENST00000615513.4
CDS-3UTR CAA 90 bp GCAGAAGATGTAGAGCGGGCCTTTGAGGCCCTCGCGCTTCCAGGACTGCAGGCTCCTGCCTGCTCTGGCTaGACTCCAGGGCTGAGTGAC +
Preference number: 5 (lower is better)
Translates to: AEDVERAFEALALPGLQAPACSG*TPGLSD
Trigger: GTCACTCAGCCCTGGAGTCAAGCCAGAGCAGGCAGG...AGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATCTTCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373711.3
CDS CCA 90 bp GGTGTCTCGGTGACAAAGTCGAAGTTCCATCGCTCACGGGCCTCCTaGATGCAGCCCGCCATTAGCGCATCACAGTCGCGGCTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: GVSVTKSKFHRSRAS*MQPAISASQSRLSC
Trigger: GCAGCTGAGCCGCGACTGTGATGCGCTAATGGCGGGCTGCATCCAGGAGGCCCGTGAGCGATGGAACTTCGACTTTGTCACCGAGACACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000244741.10
ENST00000373711.3
ENST00000405375.5
ENST00000448526.6
ENST00000459970.1
ENST00000478800.1
ENST00000615513.4
CDS-3UTR CAA 90 bp GCAGAAGATGTAGAGCGGGCCTTTGAGGCCCTCGCGCTTCCAGGACTGCAGGCTAGGTCGCTGGACGATTaGAGGGGCCAGTGTCTCCCT +
Preference number: 5 (lower is better)
Translates to: AEDVERAFEALALPGLQARSLDD*RGQCLP
Trigger: AGGGAGACACTGGCCCCTCAAATCGTCCAGCGACCT...AGCCTGCAGTCCTGGAAGCGCGAGGGCCTCAAAGGCCCGCTCTACATCTTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS GCA 90 bp AGTGATGAGTCAGTTTCCTGCAAGGCGCTGCTCGCCCGCCAAAACTaGTTCCACTCCGGCTGCGCGTCACCCTGCCGCAGAAACACCTGT +
Preference number: 5 (lower is better)
Translates to: SDESVSCKALLARQN*FHSGCASPCRRNTC
Trigger: ACAGGTGTTTCTGCGGCAGGGTGACGCGCAGCCGGAGTGGAAGCAGTTTTGGCGGGCGAGCAGCGCCTTGCAGGAAACTGACTCATCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462537.3
CDS CCA 90 bp TCCCCTGAGCGAGGCACAAGGGTACAAGACAGTGACAGGTCCACATaGTCTTCCTCTGCTGTCCCCTGCAGCAGAGCAGGTGAGGTGCCA +
Preference number: 5 (lower is better)
Translates to: SPERGTRVQDSDRST*SSSAVPCSRAGEVP
Trigger: TGGCACCTCACCTGCTCTGCTGCAGGGGACAGCAGAGGAAGACCATGTGGACCTGTCACTGTCTTGTACCCTTGTGCCTCGCTCAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000244741.10
ENST00000373711.3
ENST00000405375.5
ENST00000448526.6
ENST00000459970.1
ENST00000478800.1
ENST00000615513.4
CDS-3UTR CAA 90 bp GGAGGAAGTAGCTGGCATGAAGCCGGCCCACCCAACCTCCGGGAGAGAGGAAAAGGAGCTGGAAGGTGTTaGGGGTCAGACCCCAATACT +
Preference number: 5 (lower is better)
Translates to: GGSSWHEAGPPNLRERGKGAGRC*GSDPNT
Trigger: AGTATTGGGGTCTGACCCCAAACACCTTCCAGCTCC...TTTTCCTCTCTCCCGGAGGTTGGGTGGGCCGGCTTCATGCCAGCTACTTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CAA 90 bp GAATTCAGGTCTGAGTGTCCAGGAAAGGGGGTGAATTTCATAACCGCCTGTGACGCCCGGGGTCCCCTGTaGTCTGCCGCCGCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: EFRSECPGKGVNFITACDARGPL*SAAALS
Trigger: TGAGAGAGCGGCGGCAGACAACAGGGGACCCCGGGC...GTCACAGGCGGTTATGAAATTCACCCCCTTTCCTGGACACTCAGACCTGAATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000405375.5
CDS CCA 90 bp CTTCCAGGACTGCAGGCTTCCTGTGGGCGGATTAGGGCTTCCTCTTaGAGAAGATCAGCCGGCGTTTGGAGTGGTAGAAATCTGTCATGC +
Preference number: 5 (lower is better)
Translates to: LPGLQASCGRIRASS*RRSAGVWSGRNLSC
Trigger: GCATGACAGATTTCTACCACTCCAAACGCCGGCTGATCTTCTCCAAGAGGAAGCCCTAATCCGCCCACAGGAAGCCTGCAGTCCTGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000244741.10
ENST00000373711.3
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CAA 90 bp CAGTGCCTCCAGGGGCTCAACGTTAGTGCCAGGAAAGACAACTACTCCCAGCCCAAGAAATCCCTGTGGTaGCAGCAGCTGAAAACAGGC +
Preference number: 5 (lower is better)
Translates to: QCLQGLNVSARKDNYSQPKKSLW*QQLKTG
Trigger: GCCTGTTTTCAGCTGCTGCAACCACAGGGATTTCTT...GGGCTGGGAGTAGTTGTCTTTCCTGGCACTAACGTTGAGCCCCTGGAGGCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448526.6
CDS TCA 90 bp ATCCCTGTGGTTGCAGCAGCTTTGTTGGCCAGGAAGGGGAGGATTTaGCGAGTGAGTTGTCTGTCTCCTGAATACTCCCCACATAGCCCG +
Preference number: 5 (lower is better)
Translates to: IPVVAAALLARKGRI*RVSCLSPEYSPHSP
Trigger: CGGGCTATGTGGGGAGTATTCAGGAGACAGACAACTCACTCGTCAAATCCTCCCCTTCCTGGCCAACAAAGCTGCTGCAACCACAGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459970.1
CDS-3UTR CAA 90 bp GACACAGAACAGTACAGGGTGTGGTCCCTGCCCTCGAGAGGTTTACAGTCTAGGGGGACTCCAAAGTTTTaGATGATGCCCCCACTCGGT +
Preference number: 5 (lower is better)
Translates to: DTEQYRVWSLPSRGLQSRGTPKF*MMPPLG
Trigger: ACCGAGTGGGGGCATCATCAAAAACTTTGGAGTCCC...CCTAGACTGTAAACCTCTCGAGGGCAGGGACCACACCCTGTACTGTTCTGTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CAA 90 bp AGGAGCTGGAAGGTGTTTGGGGTCAGACCCCAATACTCCAAGTACACTAAGCACGGAGCTGGAAGGTGTTaGGGGTCAGACCCCAATACT +
Preference number: 5 (lower is better)
Translates to: RSWKVFGVRPQYSKYTKHGAGRC*GSDPNT
Trigger: AGTATTGGGGTCTGACCCCAAACACCTTCCAGCTCC...GTGCTTAGTGTACTTGGAGTATTGGGGTCTGACCCCAAACACCTTCCAGCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS TCA 90 bp TGGTTGCAGCAGCTTTGTTGGCCAGGAAGGGGAGGATTTGACGAGTaGGTTGTCTGTCTCCTGAATACTCCCCACATAGCCCGTATACAC +
Preference number: 5 (lower is better)
Translates to: WLQQLCWPGRGGFDE*VVCLLNTPHIARIH
Trigger: GTGTATACGGGCTATGTGGGGAGTATTCAGGAGACAGACAACTCACTCGTCAAATCCTCCCCTTCCTGGCCAACAAAGCTGCTGCAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459970.1
CDS-3UTR CAA 90 bp AAGACACAGAACAGTACAGGGTGTGGTCCCTGCCCTCGAGAGGTTTACAGTCTAGGGACTCCAAAGTTTTaGATGATGCCCCCACTCGGT +
Preference number: 5 (lower is better)
Translates to: KTQNSTGCGPCPREVYSLGTPKF*MMPPLG
Trigger: ACCGAGTGGGGGCATCATCAAAAACTTTGGAGTCCC...TAGACTGTAAACCTCTCGAGGGCAGGGACCACACCCTGTACTGTTCTGTGTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS-3UTR CAA 90 bp TTACAGTCTAGGTGGAGAAACGGGAACCAGGACACATGGGGAGCCGAGAGAAAAGGGACTCCAAAGTTTTaGATGATGCCCCCACTCGGT +
Preference number: 5 (lower is better)
Translates to: LQSRWRNGNQDTWGAERKGTPKF*MMPPLG
Trigger: ACCGAGTGGGGGCATCATCAAAAACTTTGGAGTCCC...TTTTCTCTCGGCTCCCCATGTGTCCTGGTTCCCGTTTCTCCACCTAGACTGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000244741.10
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS CCA 72 bp TCCTCGCGGACACGCAGGGACACACGCGGGCACGCTTaGCTCGGCTCTGGGCCGCCGGCCCGGGGTCCCCTG +
Preference number: 6 (lower is better)
Translates to: SSRTRRDTRGHA*LGSGPPARGPL
Trigger: CAGGGGACCCCGGGCCGGCGGCCCAGAGCCGAGCCAAGCGTGCCCGCGTGTGTCCCTGCGTGTCCGCGAGGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405375.5
ENST00000462537.3
ENST00000478800.1
CDS CCA 72 bp ACGCAGGGACACACGCGGGCACGCTTGGCTCGGCTCTaGGCCGCCGGCCCGGGGTCCCCTGTTGTCTGCCGC +
Preference number: 6 (lower is better)
Translates to: TQGHTRARLARL*AAGPGSPVVCR
Trigger: GCGGCAGACAACAGGGGACCCCGGGCCGGCGGCCCAGAGCCGAGCCAAGCGTGCCCGCGTGTGTCCCTGCGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405375.5
ENST00000462537.3
ENST00000478800.1
CDS GCA 72 bp CGGCTCTGGGCCGCCGGCCCGGGGTCCCCTGTTGTCTaGCGCCGCTCTCTCACCTCCTCTGAGTGCCTCGGT +
Preference number: 6 (lower is better)
Translates to: RLWAAGPGSPVV*RRSLTSSECLG
Trigger: ACCGAGGCACTCAGAGGAGGTGAGAGAGCGGCGGCAGACAACAGGGGACCCCGGGCCGGCGGCCCAGAGCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405375.5
ENST00000462537.3
ENST00000478800.1
CDS CCA 72 bp GAGGGGGCGCCGGCCTCCAGGAAATCACGCGCGGAGTaGGAGGTGCGTGGGCAGAGCCTCGGACCGCTGGAG +
Preference number: 6 (lower is better)
Translates to: EGAPASRKSRAE*EVRGQSLGPLE
Trigger: CTCCAGCGGTCCGAGGCTCTGCCCACGCACCTCCCACTCCGCGCGTGATTTCCTGGAGGCCGGCGCCCCCTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462537.3
CDS CAA 90 bp GGGCACGCTTGGCTCGGCTCTGGGCCGCCGGCCCGGGGTCCCCTGTaGTCTGCCGCCGCTCTCTCACCTCCTCTGAGTGCCTCGGTGCCT +
Preference number: 6 (lower is better)
Translates to: GHAWLGSGPPARGPL*SAAALSPPLSASVP
Trigger: AGGCACCGAGGCACTCAGAGGAGGTGAGAGAGCGGCGGCAGACAACAGGGGACCCCGGGCCGGCGGCCCAGAGCCGAGCCAAGCGTGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405375.5
ENST00000462537.3
ENST00000478800.1
CDS CAA 90 bp CGAACACGCATCCTCGCGGACACGCAGGGACACACGCGGGCACGCTaGGCTCGGCTCTGGGCCGCCGGCCCGGGGTCCCCTGTTGTCTGC +
Preference number: 6 (lower is better)
Translates to: RTRILADTQGHTRAR*ARLWAAGPGSPVVC
Trigger: GCAGACAACAGGGGACCCCGGGCCGGCGGCCCAGAGCCGAGCCAAGCGTGCCCGCGTGTGTCCCTGCGTGTCCGCGAGGATGCGTGTTCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405375.5
ENST00000462537.3
ENST00000478800.1
CDS GCA 72 bp CGCTGTCCACTGGGCCGAAGAGGCGGCGGCAGGCCTTaGTGCCGCATGGGTTCTGACGGACATCCCCAGCCG +
Preference number: 6 (lower is better)
Translates to: RCPLGRRGGGRP*CRMGSDGHPQP
Trigger: CGGCTGGGGATGTCCGTCAGAACCCATGCGGCAGCAAGGCCTGCCGCCGCCTCTTCGGCCCAGTGGACAGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000244741.10
ENST00000373711.3
ENST00000405375.5
ENST00000448526.6
ENST00000459970.1
ENST00000478800.1
ENST00000615513.4
CDS TCA 72 bp GTCCCCTGTTGTCTGCCGCCGCTCTCTCACCTCCTCTaGGTGCCTCGGTGCCTCGGCGAATCCGCGCCCAGC +
Preference number: 6 (lower is better)
Translates to: VPCCLPPLSHLL*VPRCLGESAPS
Trigger: GCTGGGCGCGGATTCGCCGAGGCACCGAGGCACTCAGAGGAGGTGAGAGAGCGGCGGCAGACAACAGGGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405375.5
ENST00000478800.1
CDS GCA 72 bp CCTGTTGTCTGCCGCCGCTCTCTCACCTCCTCTGAGTaGCTCGGTGCCTCGGCGAATCCGCGCCCAGCTCCG +
Preference number: 6 (lower is better)
Translates to: PVVCRRSLTSSE*LGASANPRPAP
Trigger: CGGAGCTGGGCGCGGATTCGCCGAGGCACCGAGGCACTCAGAGGAGGTGAGAGAGCGGCGGCAGACAACAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405375.5
ENST00000478800.1
CDS GCA 72 bp TGTCCACTGGGCCGAAGAGGCGGCGGCAGGCCTTGCTaGCGCATGGGTTCTGACGGACATCCCCAGCCGGTT +
Preference number: 6 (lower is better)
Translates to: CPLGRRGGGRPC*RMGSDGHPQPV
Trigger: AACCGGCTGGGGATGTCCGTCAGAACCCATGCGGCAGCAAGGCCTGCCGCCGCCTCTTCGGCCCAGTGGACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000244741.10
ENST00000373711.3
ENST00000405375.5
ENST00000448526.6
ENST00000459970.1
ENST00000478800.1
ENST00000615513.4
CDS TCA 72 bp CTCCGGCTGCGCGTCACCCTGCCGCAGAAACACCTGTaGACGCAGCACACACCCGCGAACACGCATCCTCGC +
Preference number: 6 (lower is better)
Translates to: LRLRVTLPQKHL*TQHTPANTHPR
Trigger: GCGAGGATGCGTGTTCGCGGGTGTGTGCTGCGTTCACAGGTGTTTCTGCGGCAGGGTGACGCGCAGCCGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462537.3
CDS CCA 72 bp GGCCTCCAGGAAATCACGCGCGGAGTGGGAGGTGCGTaGGCAGAGCCTCGGACCGCTGGAGGGAGTAGTGAT +
Preference number: 6 (lower is better)
Translates to: GLQEITRGVGGA*AEPRTAGGSSD
Trigger: ATCACTACTCCCTCCAGCGGTCCGAGGCTCTGCCCACGCACCTCCCACTCCGCGCGTGATTTCCTGGAGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462537.3
CDS GCA 72 bp TCAGTTTCCTGCAAGGCGCTGCTCGCCCGCCAAAACTaGTTCCACTCCGGCTGCGCGTCACCCTGCCGCAGA +
Preference number: 6 (lower is better)
Translates to: SVSCKALLARQN*FHSGCASPCRR
Trigger: TCTGCGGCAGGGTGACGCGCAGCCGGAGTGGAAGCAGTTTTGGCGGGCGAGCAGCGCCTTGCAGGAAACTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462537.3
CDS CCA 72 bp GCCCCGCACACGCTCCCAGGCGAAGTCACCCTCCAGTaGTGTCTCGGTGACAAAGTCGAAGTTCCATCGCTC +
Preference number: 6 (lower is better)
Translates to: APHTLPGEVTLQ*CLGDKVEVPSL
Trigger: GAGCGATGGAACTTCGACTTTGTCACCGAGACACCACTGGAGGGTGACTTCGCCTGGGAGCGTGTGCGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000244741.10
ENST00000373711.3
ENST00000405375.5
ENST00000448526.6
ENST00000459970.1
ENST00000478800.1
ENST00000615513.4
CDS TCA 72 bp GCTCCCAGGCGAAGTCACCCTCCAGTGGTGTCTCGGTaGCAAAGTCGAAGTTCCATCGCTCACGGGCCTCCT +
Preference number: 6 (lower is better)
Translates to: APRRSHPPVVSR*QSRSSIAHGPP
Trigger: AGGAGGCCCGTGAGCGATGGAACTTCGACTTTGTCACCGAGACACCACTGGAGGGTGACTTCGCCTGGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000244741.10
ENST00000373711.3
ENST00000405375.5
ENST00000448526.6
ENST00000459970.1
ENST00000478800.1
ENST00000615513.4
CDS CCA 72 bp GTGACAAAGTCGAAGTTCCATCGCTCACGGGCCTCCTaGATGCAGCCCGCCATTAGCGCATCACAGTCGCGG +
Preference number: 6 (lower is better)
Translates to: VTKSKFHRSRAS*MQPAISASQSR
Trigger: CCGCGACTGTGATGCGCTAATGGCGGGCTGCATCCAGGAGGCCCGTGAGCGATGGAACTTCGACTTTGTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000244741.10
ENST00000373711.3
ENST00000405375.5
ENST00000448526.6
ENST00000459970.1
ENST00000478800.1
ENST00000615513.4
CDS TCA 72 bp GGCGCCTGCCTGCTCTGGCTTGACTCCAGGGCTGAGTaGCTGCACGACCTTGGCAGCAACTGGATTTTCCTA +
Preference number: 6 (lower is better)
Translates to: GACLLWLDSRAE*LHDLGSNWIFL
Trigger: TAGGAAAATCCAGTTGCTGCCAAGGTCGTGCAGTCACTCAGCCCTGGAGTCAAGCCAGAGCAGGCAGGCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373711.3
CDS CCA 72 bp CTGCAGGCTTCCTGTGGGCGGATTAGGGCTTCCTCTTaGAGAAGATCAGCCGGCGTTTGGAGTGGTAGAAAT +
Preference number: 6 (lower is better)
Translates to: LQASCGRIRASS*RRSAGVWSGRN
Trigger: ATTTCTACCACTCCAAACGCCGGCTGATCTTCTCCAAGAGGAAGCCCTAATCCGCCCACAGGAAGCCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000244741.10
ENST00000373711.3
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS GCA 72 bp CTGACATGGCGCCTGAACAGAAGAAATCCCTGTGGTTaGAGCAGCTTTGTTGGCCAGGAAGGGGAGGATTTG +
Preference number: 6 (lower is better)
Translates to: LTWRLNRRNPCG*SSFVGQEGEDL
Trigger: CAAATCCTCCCCTTCCTGGCCAACAAAGCTGCTGCAACCACAGGGATTTCTTCTGTTCAGGCGCCATGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459970.1
CDS CCA 72 bp ATTAGGGCTTCCTCTTGGAGAAGATCAGCCGGCGTTTaGAGTGGTAGAAATCTGTCATGCTGGTCTGCCGCC +
Preference number: 6 (lower is better)
Translates to: IRASSWRRSAGV*SGRNLSCWSAA
Trigger: GGCGGCAGACCAGCATGACAGATTTCTACCACTCCAAACGCCGGCTGATCTTCTCCAAGAGGAAGCCCTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000244741.10
ENST00000373711.3
ENST00000405375.5
ENST00000448526.6
ENST00000615513.4
CDS TCA 72 bp GTTGCAGCAGCTTTGTTGGCCAGGAAGGGGAGGATTTaGCGAGTGAGTTGTCTGTCTCCTGAATACTCCCCA +
Preference number: 6 (lower is better)
Translates to: VAAALLARKGRI*RVSCLSPEYSP
Trigger: TGGGGAGTATTCAGGAGACAGACAACTCACTCGTCAAATCCTCCCCTTCCTGGCCAACAAAGCTGCTGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459970.1