Pregenerated sensors for CDKL4 (Homo sapiens)
Ensembl gene IDs: ENSG00000205111Ensembl transcript IDs: ENST00000378803.5, ENST00000395035.3, ENST00000451199.5
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGCCTAGGAAAGGCAGACTTAGGTGCCTGCTGTGGGTGAAAAGATaGAAGAGTCAAGTTACCGTTATTGCACATCTGGAGGCTACAGAA | + |
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Preference number: 1 (lower is better) Translates to: KPRKGRLRCLLWVKR*KSQVTVIAHLEATE Trigger: TTCTGTAGCCTCCAGATGTGCAATAACGGTAACTTGACTCTTCCATCTTTTCACCCACAGCAGGCACCTAAGTCTGCCTTTCCTAGGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378803.5 |
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| 3UTR GCA 90 bp | GTGCCTGCTGTGGGTGAAAAGATGGAAGAGTCAAGTTACCGTTATTaGACATCTGGAGGCTACAGAAAGGCACTTGGATTCCTTTGCAAT | + |
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Preference number: 1 (lower is better) Translates to: VPAVGEKMEESSYRY*TSGGYRKALGFLCN Trigger: ATTGCAAAGGAATCCAAGTGCCTTTCTGTAGCCTCCAGATGTGCAATAACGGTAACTTGACTCTTCCATCTTTTCACCCACAGCAGGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378803.5 |
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| 3UTR CCA 90 bp | GTCAAGTTACCGTTATTGCACATCTGGAGGCTACAGAAAGGCACTTaGATTCCTTTGCAATGCTGGCAAAACTCAGTCCTGTTGGAATCA | + |
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Preference number: 1 (lower is better) Translates to: VKLPLLHIWRLQKGT*IPLQCWQNSVLLES Trigger: TGATTCCAACAGGACTGAGTTTTGCCAGCATTGCAAAGGAATCCAAGTGCCTTTCTGTAGCCTCCAGATGTGCAATAACGGTAACTTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378803.5 |
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| 3UTR CCA 90 bp | ACAGTCACCATACTGTTCTGCAATATTGGCCCATTGGGTAGAATTTaGTTCCCAGATGTCTGGGTTTCATTCCTTTGTACCTGGCAGATC | + |
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Preference number: 1 (lower is better) Translates to: TVTILFCNIGPLGRI*FPDVWVSFLCTWQI Trigger: GATCTGCCAGGTACAAAGGAATGAAACCCAGACATCTGGGAACCAAATTCTACCCAATGGGCCAATATTGCAGAACAGTATGGTGACTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378803.5 |
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| 3UTR GCA 90 bp | TTGCACATCTGGAGGCTACAGAAAGGCACTTGGATTCCTTTGCAATaGTGGCAAAACTCAGTCCTGTTGGAATCAGCATTTTATTATATG | + |
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Preference number: 1 (lower is better) Translates to: LHIWRLQKGTWIPLQ*WQNSVLLESAFYYM Trigger: CATATAATAAAATGCTGATTCCAACAGGACTGAGTTTTGCCAGCATTGCAAAGGAATCCAAGTGCCTTTCTGTAGCCTCCAGATGTGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378803.5 |
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| 3UTR CCA 90 bp | ATTAAGCTAGACAAATACAACTACACCAGTACAAATGAAAGGTCTTaGTGTCCACCTTGTCTCACTTTGAAAGGCAGACAAACAAAAACA | + |
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Preference number: 1 (lower is better) Translates to: IKLDKYNYTSTNERS*CPPCLTLKGRQTKT Trigger: TGTTTTTGTTTGTCTGCCTTTCAAAGTGAGACAAGGTGGACACCAAGACCTTTCATTTGTACTGGTGTAGTTGTATTTGTCTAGCTTAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378803.5 |
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| 3UTR CCA 90 bp | GCATTTTATTATATGAAGTTGTTATATTATGGGTATACGATCTTGTaGGTGGGATATCCAATCAGAGCAGCCAAAGAGTTGCGTAACGAT | + |
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Preference number: 1 (lower is better) Translates to: AFYYMKLLYYGYTIL*VGYPIRAAKELRND Trigger: ATCGTTACGCAACTCTTTGGCTGCTCTGATTGGATATCCCACCCACAAGATCGTATACCCATAATATAACAACTTCATATAATAAAATGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378803.5 |
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| 3UTR CAA 90 bp | CCAGATGTCTGGGTTTCATTCCTTTGTACCTGGCAGATCTTGGTTTaGAGAAAAAGCCTAGGAAAGGCAGACTTAGGTGCCTGCTGTGGG | + |
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Preference number: 2 (lower is better) Translates to: PDVWVSFLCTWQILV*RKSLGKADLGACCG Trigger: CCCACAGCAGGCACCTAAGTCTGCCTTTCCTAGGCTTTTTCTCAAAACCAAGATCTGCCAGGTACAAAGGAATGAAACCCAGACATCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378803.5 |
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| 3UTR-3UTR CCA 90 bp | GCACATCTGGAGGCTACAGAAAGGCACTTGGATTCCTTTGCAATGCTGGCAAAAGGGTATACGATCTTGTaGGTGGGATATCCAATCAGA | + |
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Preference number: 2 (lower is better) Translates to: AHLEATERHLDSFAMLAKGYTIL*VGYPIR Trigger: TCTGATTGGATATCCCACCCACAAGATCGTATACCC...TTTTGCCAGCATTGCAAAGGAATCCAAGTGCCTTTCTGTAGCCTCCAGATGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378803.5 |
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| 3UTR CAA 90 bp | AGTCAAGTTACCGTTATTGCACATCTGGAGGCTACAGAAAGGCACTaGGATTCCTTTGCAATGCTGGCAAAACTCAGTCCTGTTGGAATC | + |
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Preference number: 2 (lower is better) Translates to: SQVTVIAHLEATERH*DSFAMLAKLSPVGI Trigger: GATTCCAACAGGACTGAGTTTTGCCAGCATTGCAAAGGAATCCAAGTGCCTTTCTGTAGCCTCCAGATGTGCAATAACGGTAACTTGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378803.5 |
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| 3UTR-3UTR CCA 90 bp | GCACATCTGGAGGCTACAGAAAGGCACTTGGATTCCTTTGCAATGCTGGCAAAAACAAATGAAAGGTCTTaGTGTCCACCTTGTCTCACT | + |
|
Preference number: 2 (lower is better) Translates to: AHLEATERHLDSFAMLAKTNERS*CPPCLT Trigger: AGTGAGACAAGGTGGACACCAAGACCTTTCATTTGT...TTTTGCCAGCATTGCAAAGGAATCCAAGTGCCTTTCTGTAGCCTCCAGATGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378803.5 |
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| 3UTR CAA 90 bp | CCGTTATTGCACATCTGGAGGCTACAGAAAGGCACTTGGATTCCTTaGCAATGCTGGCAAAACTCAGTCCTGTTGGAATCAGCATTTTAT | + |
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Preference number: 2 (lower is better) Translates to: PLLHIWRLQKGTWIP*QCWQNSVLLESAFY Trigger: ATAAAATGCTGATTCCAACAGGACTGAGTTTTGCCAGCATTGCAAAGGAATCCAAGTGCCTTTCTGTAGCCTCCAGATGTGCAATAACGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378803.5 |
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| 3UTR-3UTR TCA 90 bp | CCAGATGTCTGGGTTTCATTCCTTTGTACCTGGCAGATCTTGGTTTTGAGAAAACTACACCAGTACAAATaGAAGGTCTTGGTGTCCACC | + |
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Preference number: 2 (lower is better) Translates to: PDVWVSFLCTWQILVLRKLHQYK*KVLVST Trigger: GGTGGACACCAAGACCTTTCATTTGTACTGGTGTAG...TTTTCTCAAAACCAAGATCTGCCAGGTACAAAGGAATGAAACCCAGACATCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378803.5 |
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| 3UTR-3UTR CCA 90 bp | GTCATAACAGTCACCATACTGTTCTGCAATATTGGCCCATTGGGTAGAATTTGGCCGTTATTGCACATCTaGAGGCTACAGAAAGGCACT | + |
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Preference number: 2 (lower is better) Translates to: VITVTILFCNIGPLGRIWPLLHI*RLQKGT Trigger: AGTGCCTTTCTGTAGCCTCCAGATGTGCAATAACGG...CCAAATTCTACCCAATGGGCCAATATTGCAGAACAGTATGGTGACTGTTATGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378803.5 |
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| 3UTR CAA 90 bp | ATGTTTGTCATAACAGTCACCATACTGTTCTGCAATATTGGCCCATaGGGTAGAATTTGGTTCCCAGATGTCTGGGTTTCATTCCTTTGT | + |
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Preference number: 2 (lower is better) Translates to: MFVITVTILFCNIGP*GRIWFPDVWVSFLC Trigger: ACAAAGGAATGAAACCCAGACATCTGGGAACCAAATTCTACCCAATGGGCCAATATTGCAGAACAGTATGGTGACTGTTATGACAAACAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378803.5 |
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| 3UTR-3UTR TCA 90 bp | ACTTGGATTCCTTTGCAATGCTGGCAAAACTCAGTCCTGTTGGAATCAGCATTTCACCTTGTCTCACTTTaGAAGGCAGACAAACAAAAA | + |
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Preference number: 2 (lower is better) Translates to: TWIPLQCWQNSVLLESAFHLVSL*KADKQK Trigger: TTTTTGTTTGTCTGCCTTTCAAAGTGAGACAAGGTG...AAATGCTGATTCCAACAGGACTGAGTTTTGCCAGCATTGCAAAGGAATCCAAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378803.5 |
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| 3UTR-3UTR TCA 90 bp | AATCAAAGTATAAGCTCACAAATTCTCCATATAGATAGCCTCGGGAGGGGCTGCTTGCATTTGAAACACTaGGAATTCCTATCTCACTTG | + |
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Preference number: 2 (lower is better) Translates to: NQSISSQILHIDSLGRGCLHLKH*EFLSHL Trigger: CAAGTGAGATAGGAATTCTCAGTGTTTCAAATGCAA...GCAGCCCCTCCCGAGGCTATCTATATGGAGAATTTGTGAGCTTATACTTTGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451199.5 |
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| 3UTR CCA 72 bp | CCGTTATTGCACATCTGGAGGCTACAGAAAGGCACTTaGATTCCTTTGCAATGCTGGCAAAACTCAGTCCTG | + |
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Preference number: 3 (lower is better) Translates to: PLLHIWRLQKGT*IPLQCWQNSVL Trigger: CAGGACTGAGTTTTGCCAGCATTGCAAAGGAATCCAAGTGCCTTTCTGTAGCCTCCAGATGTGCAATAACGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378803.5 |
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| 3UTR CCA 72 bp | AAAGGCAGACTTAGGTGCCTGCTGTGGGTGAAAAGATaGAAGAGTCAAGTTACCGTTATTGCACATCTGGAG | + |
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Preference number: 3 (lower is better) Translates to: KGRLRCLLWVKR*KSQVTVIAHLE Trigger: CTCCAGATGTGCAATAACGGTAACTTGACTCTTCCATCTTTTCACCCACAGCAGGCACCTAAGTCTGCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378803.5 |
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| 3UTR-3UTR CAA 90 bp | AAAAGATGGAAGAGTCAAGTTACCGTTATTGCACATCTGGAGGCTACAGAAAGGGTCTTGGTGTCCACCTaGTCTCACTTTGAAAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: KRWKSQVTVIAHLEATERVLVST*SHFERQ Trigger: CTGCCTTTCAAAGTGAGACAAGGTGGACACCAAGAC...CCTTTCTGTAGCCTCCAGATGTGCAATAACGGTAACTTGACTCTTCCATCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378803.5 |
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| 3UTR-3UTR CAA 90 bp | GCACATCTGGAGGCTACAGAAAGGCACTTGGATTCCTTTGCAATGCTGGCAAAAGAGTTGCGTAACGATTaGATTCAGGTGTGTTTGGAA | + |
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Preference number: 3 (lower is better) Translates to: AHLEATERHLDSFAMLAKELRND*IQVCLE Trigger: TTCCAAACACACCTGAATCAAATCGTTACGCAACTC...TTTTGCCAGCATTGCAAAGGAATCCAAGTGCCTTTCTGTAGCCTCCAGATGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378803.5 |
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| 3UTR GCA 72 bp | GTGGGTGAAAAGATGGAAGAGTCAAGTTACCGTTATTaGACATCTGGAGGCTACAGAAAGGCACTTGGATTC | + |
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Preference number: 3 (lower is better) Translates to: VGEKMEESSYRY*TSGGYRKALGF Trigger: GAATCCAAGTGCCTTTCTGTAGCCTCCAGATGTGCAATAACGGTAACTTGACTCTTCCATCTTTTCACCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378803.5 |
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| 3UTR CCA 72 bp | AAAAAGCCTAGGAAAGGCAGACTTAGGTGCCTGCTGTaGGTGAAAAGATGGAAGAGTCAAGTTACCGTTATT | + |
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Preference number: 3 (lower is better) Translates to: KKPRKGRLRCLL*VKRWKSQVTVI Trigger: AATAACGGTAACTTGACTCTTCCATCTTTTCACCCACAGCAGGCACCTAAGTCTGCCTTTCCTAGGCTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378803.5 |
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| 3UTR CCA 72 bp | ATACTGTTCTGCAATATTGGCCCATTGGGTAGAATTTaGTTCCCAGATGTCTGGGTTTCATTCCTTTGTACC | + |
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Preference number: 3 (lower is better) Translates to: ILFCNIGPLGRI*FPDVWVSFLCT Trigger: GGTACAAAGGAATGAAACCCAGACATCTGGGAACCAAATTCTACCCAATGGGCCAATATTGCAGAACAGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378803.5 |
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| 3UTR-3UTR CAA 90 bp | ATAACAGTCACCATACTGTTCTGCAATATTGGCCCATTGGGTAGAATTTGGTTCTATGGGTATACGATCTaGTGGGTGGGATATCCAATC | + |
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Preference number: 3 (lower is better) Translates to: ITVTILFCNIGPLGRIWFYGYTI*WVGYPI Trigger: GATTGGATATCCCACCCACAAGATCGTATACCCATA...GAACCAAATTCTACCCAATGGGCCAATATTGCAGAACAGTATGGTGACTGTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378803.5 |
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| 3UTR CCA 72 bp | GACAAATACAACTACACCAGTACAAATGAAAGGTCTTaGTGTCCACCTTGTCTCACTTTGAAAGGCAGACAA | + |
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Preference number: 3 (lower is better) Translates to: DKYNYTSTNERS*CPPCLTLKGRQ Trigger: TTGTCTGCCTTTCAAAGTGAGACAAGGTGGACACCAAGACCTTTCATTTGTACTGGTGTAGTTGTATTTGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378803.5 |
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| 3UTR-3UTR CAA 90 bp | ATGTTTGTCATAACAGTCACCATACTGTTCTGCAATATTGGCCCATTGGGTAGATGGCAGATCTTGGTTTaGAGAAAAAGCCTAGGAAAG | + |
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Preference number: 3 (lower is better) Translates to: MFVITVTILFCNIGPLGRWQILV*RKSLGK Trigger: CTTTCCTAGGCTTTTTCTCAAAACCAAGATCTGCCA...TCTACCCAATGGGCCAATATTGCAGAACAGTATGGTGACTGTTATGACAAACAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378803.5 |
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| 3UTR CCA 72 bp | TATATGAAGTTGTTATATTATGGGTATACGATCTTGTaGGTGGGATATCCAATCAGAGCAGCCAAAGAGTTG | + |
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Preference number: 3 (lower is better) Translates to: YMKLLYYGYTIL*VGYPIRAAKEL Trigger: CAACTCTTTGGCTGCTCTGATTGGATATCCCACCCACAAGATCGTATACCCATAATATAACAACTTCATATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378803.5 |
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| 3UTR TCA 72 bp | ATCCAATCAGAGCAGCCAAAGAGTTGCGTAACGATTTaGTTCAGGTGTGTTTGGAATAAGATTTTTGCAATA | + |
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Preference number: 3 (lower is better) Translates to: IQSEQPKSCVTI*FRCVWNKIFAI Trigger: TATTGCAAAAATCTTATTCCAAACACACCTGAATCAAATCGTTACGCAACTCTTTGGCTGCTCTGATTGGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378803.5 |
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| CDS-3UTR TCA 90 bp | GCACATCTGGAGGCTACAGAAAGGCACTTGGATTCCTTTGCAATGCTGGCAAAAAAGTTGGTCCACATCTaGTTTTCCAGGCCACAGTGG | + |
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Preference number: 4 (lower is better) Translates to: AHLEATERHLDSFAMLAKKLVHI*FSRPQW Trigger: CCACTGTGGCCTGGAAAATCAGATGTGGACCAACTT...TTTTGCCAGCATTGCAAAGGAATCCAAGTGCCTTTCTGTAGCCTCCAGATGTGC 49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000378803.5 |
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| CDS-3UTR GCA 90 bp | GCACATCTGGAGGCTACAGAAAGGCACTTGGATTCCTTTGCAATGCTGGCAAAAAAAGGCAGACTTAGGTaGCTGCTGTGGGTGAAAAGA | + |
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Preference number: 4 (lower is better) Translates to: AHLEATERHLDSFAMLAKKGRLR*LLWVKR Trigger: TCTTTTCACCCACAGCAGGCACCTAAGTCTGCCTTT...TTTTGCCAGCATTGCAAAGGAATCCAAGTGCCTTTCTGTAGCCTCCAGATGTGC 48% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000378803.5 |
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| CDS-3UTR CCA 90 bp | ATAACAGTCACCATACTGTTCTGCAATATTGGCCCATTGGGTAGAATTTGGTTCTTTTCCAGGCCACAGTaGCTGGCCTGTCAGGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: ITVTILFCNIGPLGRIWFFSRPQ*LACQEL Trigger: GAGCTCCTGACAGGCCAGCCACTGTGGCCTGGAAAA...GAACCAAATTCTACCCAATGGGCCAATATTGCAGAACAGTATGGTGACTGTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378803.5 |
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| CDS-3UTR TCA 90 bp | TCTGGAGGCTACAGAAAGGCACTTGGATTCCTTTGCAATGCTGGCAAAACTCAGGCCATAATACGCTTTTaGTCACTCCATCAGCAACTC | + |
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Preference number: 4 (lower is better) Translates to: SGGYRKALGFLCNAGKTQAIIRF*SLHQQL Trigger: GAGTTGCTGATGGAGTGATCAAAAGCGTATTATGGC...CTGAGTTTTGCCAGCATTGCAAAGGAATCCAAGTGCCTTTCTGTAGCCTCCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378803.5 |
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| CDS-3UTR TCA 90 bp | GTCAAGTTACCGTTATTGCACATCTGGAGGCTACAGAAAGGCACTTGGATTCCTCTACACCAGTACAAATaGAAGGTCTTGGTGTCCACC | + |
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Preference number: 4 (lower is better) Translates to: VKLPLLHIWRLQKGTWIPLHQYK*KVLVST Trigger: GGTGGACACCAAGACCTTTCATTTGTACTGGTGTAG...AGGAATCCAAGTGCCTTTCTGTAGCCTCCAGATGTGCAATAACGGTAACTTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378803.5 |
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| CDS-3UTR TCA 90 bp | ATAAGCTCACAAATTCTCCATATAGATAGCCTCGGGAGGGGCTGCTCTGATGAATGTGGCTTCCTGGTATaGGAGGCAACAGTTGATTCT | + |
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Preference number: 4 (lower is better) Translates to: ISSQILHIDSLGRGCSDECGFLV*EATVDS Trigger: AGAATCAACTGTTGCCTCTCATACCAGGAAGCCACA...TTCATCAGAGCAGCCCCTCCCGAGGCTATCTATATGGAGAATTTGTGAGCTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451199.5 |
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| CDS-3UTR CCA 90 bp | ATCTTGTGGGTGGGATATCCAATCAGAGCAGCCAAAGAGTTGCGTAACGATTTGAGCGGAAGTACCTGTTaGCGTCTTCTGTTTCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: ILWVGYPIRAAKELRNDLSGSTC*RLLFLP Trigger: AGGAAGAAACAGAAGACGCCAACAGGTACTTCCGCT...CAAATCGTTACGCAACTCTTTGGCTGCTCTGATTGGATATCCCACCCACAAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378803.5 |
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| CDS-3UTR CCA 90 bp | TTGCACATCTGGAGGCTACAGAAAGGCACTTGGATTCCTTTGCAATGCTGGCAACTACAGAAAGGCACTTaGATTCCTTTGCAATGCTGG | + |
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Preference number: 4 (lower is better) Translates to: LHIWRLQKGTWIPLQCWQLQKGT*IPLQCW Trigger: CCAGCATTGCAAAGGAATCCAAGTGCCTTTCTGTAG...TTGCCAGCATTGCAAAGGAATCCAAGTGCCTTTCTGTAGCCTCCAGATGTGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378803.5 |
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| 3UTR CAA 72 bp | ACCGTTATTGCACATCTGGAGGCTACAGAAAGGCACTaGGATTCCTTTGCAATGCTGGCAAAACTCAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: TVIAHLEATERH*DSFAMLAKLSP Trigger: AGGACTGAGTTTTGCCAGCATTGCAAAGGAATCCAAGTGCCTTTCTGTAGCCTCCAGATGTGCAATAACGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378803.5 |
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| CDS-3UTR TCA 90 bp | AAAAGATGGAAGAGTCAAGTTACCGTTATTGCACATCTGGAGGCTACAGAAAGGCTGGCTCAGGTATACTaGTGCCATGGAAAAACCCGT | + |
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Preference number: 4 (lower is better) Translates to: KRWKSQVTVIAHLEATERLAQVY*CHGKTR Trigger: ACGGGTTTTTCCATGGCATCAGTATACCTGAGCCAG...CCTTTCTGTAGCCTCCAGATGTGCAATAACGGTAACTTGACTCTTCCATCTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378803.5 |
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| CDS-3UTR GCA 90 bp | GAAAGGCACTTGGATTCCTTTGCAATGCTGGCAAAACTCAGTCCTGTTGGAATCTGGATTCCTTTGCAATaGTGGCAAAACTCAGTCCTG | + |
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Preference number: 4 (lower is better) Translates to: ERHLDSFAMLAKLSPVGIWIPLQ*WQNSVL Trigger: CAGGACTGAGTTTTGCCAGCATTGCAAAGGAATCCA...GATTCCAACAGGACTGAGTTTTGCCAGCATTGCAAAGGAATCCAAGTGCCTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378803.5 |
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| CDS-3UTR CCA 90 bp | GTCAAGTTACCGTTATTGCACATCTGGAGGCTACAGAAAGGCACTTGGATTCCTAGTTTCCATGTCTTCTaGCTCAGGTATACTGATGCC | + |
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Preference number: 4 (lower is better) Translates to: VKLPLLHIWRLQKGTWIPSFHVF*LRYTDA Trigger: GGCATCAGTATACCTGAGCCAGAAGACATGGAAACT...AGGAATCCAAGTGCCTTTCTGTAGCCTCCAGATGTGCAATAACGGTAACTTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378803.5 |
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| CDS-3UTR CCA 90 bp | ATAAGCTCACAAATTCTCCATATAGATAGCCTCGGGAGGGGCTGCTCTGATGAAAGTTTCCATGTCTTCTaGCTCAGGTATACTGATGCC | + |
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Preference number: 4 (lower is better) Translates to: ISSQILHIDSLGRGCSDESFHVF*LRYTDA Trigger: GGCATCAGTATACCTGAGCCAGAAGACATGGAAACT...TTCATCAGAGCAGCCCCTCCCGAGGCTATCTATATGGAGAATTTGTGAGCTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451199.5 |
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| CDS-3UTR CCA 90 bp | TTGCACATCTGGAGGCTACAGAAAGGCACTTGGATTCCTTTGCAATGCTGGCAAACAAATGAAAGGTCTTaGTGTCCACCTTGTCTCACT | + |
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Preference number: 4 (lower is better) Translates to: LHIWRLQKGTWIPLQCWQTNERS*CPPCLT Trigger: AGTGAGACAAGGTGGACACCAAGACCTTTCATTTGT...TTGCCAGCATTGCAAAGGAATCCAAGTGCCTTTCTGTAGCCTCCAGATGTGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378803.5 |
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| CDS-3UTR GCA 90 bp | AAAAGATGGAAGAGTCAAGTTACCGTTATTGCACATCTGGAGGCTACAGAAAGGGCCTGTCAGGAGCTCTaGAAAAACACAACCAATAGC | + |
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Preference number: 4 (lower is better) Translates to: KRWKSQVTVIAHLEATERACQEL*KNTTNS Trigger: GCTATTGGTTGTGTTTTTGCAGAGCTCCTGACAGGC...CCTTTCTGTAGCCTCCAGATGTGCAATAACGGTAACTTGACTCTTCCATCTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378803.5 |
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| CDS-3UTR GCA 90 bp | TACACCAGTACAAATGAAAGGTCTTGGTGTCCACCTTGTCTCACTTTGAAAGGCGTCACCATACTGTTCTaGAATATTGGCCCATTGGGT | + |
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Preference number: 4 (lower is better) Translates to: YTSTNERSWCPPCLTLKGVTILF*NIGPLG Trigger: ACCCAATGGGCCAATATTGCAGAACAGTATGGTGAC...GCCTTTCAAAGTGAGACAAGGTGGACACCAAGACCTTTCATTTGTACTGGTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378803.5 |
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| CDS-3UTR CCA 90 bp | ATCTTGTGGGTGGGATATCCAATCAGAGCAGCCAAAGAGTTGCGTAACGATTTGCTGTGGGTGAAAAGATaGAAGAGTCAAGTTACCGTT | + |
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Preference number: 4 (lower is better) Translates to: ILWVGYPIRAAKELRNDLLWVKR*KSQVTV Trigger: AACGGTAACTTGACTCTTCCATCTTTTCACCCACAG...CAAATCGTTACGCAACTCTTTGGCTGCTCTGATTGGATATCCCACCCACAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378803.5 |
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| CDS-3UTR CCA 90 bp | TACACCAGTACAAATGAAAGGTCTTGGTGTCCACCTTGTCTCACTTTGAAAGGCTGGTTCCCAGATGTCTaGGTTTCATTCCTTTGTACC | + |
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Preference number: 4 (lower is better) Translates to: YTSTNERSWCPPCLTLKGWFPDV*VSFLCT Trigger: GGTACAAAGGAATGAAACCCAGACATCTGGGAACCA...GCCTTTCAAAGTGAGACAAGGTGGACACCAAGACCTTTCATTTGTACTGGTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378803.5 |
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| CDS-3UTR CCA 90 bp | TACACCAGTACAAATGAAAGGTCTTGGTGTCCACCTTGTCTCACTTTGAAAGGCCCATTGGGTAGAATTTaGTTCCCAGATGTCTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: YTSTNERSWCPPCLTLKGPLGRI*FPDVWV Trigger: AACCCAGACATCTGGGAACCAAATTCTACCCAATGG...GCCTTTCAAAGTGAGACAAGGTGGACACCAAGACCTTTCATTTGTACTGGTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378803.5 |
||
| CDS-3UTR CCA 90 bp | AACATGGGGAAAGGAATCAGCAATGATCAGAGCAAAACAATTCTAGAAGGCATCGGAGATGTGGCTTCCTaGTATGAGAGGCAACAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: NMGKGISNDQSKTILEGIGDVAS*YERQQL Trigger: CAACTGTTGCCTCTCATACCAGGAAGCCACATCTCC...GATGCCTTCTAGAATTGTTTTGCTCTGATCATTGCTGATTCCTTTCCCCATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451199.5 |
||
| CDS-3UTR TCA 90 bp | TCTGGAGGCTACAGAAAGGCACTTGGATTCCTTTGCAATGCTGGCAAAACTCAGCAGAAATTAAGAGCTTaGAGTGTTTGCCATAATACG | + |
|
Preference number: 4 (lower is better) Translates to: SGGYRKALGFLCNAGKTQQKLRA*SVCHNT Trigger: CGTATTATGGCAAACACTTCAAGCTCTTAATTTCTG...CTGAGTTTTGCCAGCATTGCAAAGGAATCCAAGTGCCTTTCTGTAGCCTCCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378803.5 |
||
| CDS-3UTR CCA 90 bp | GAAAGGCACTTGGATTCCTTTGCAATGCTGGCAAAACTCAGTCCTGTTGGAATCATCAGCAACTCCATTTaGGTTTCTTTCCAGCTCATT | + |
|
Preference number: 4 (lower is better) Translates to: ERHLDSFAMLAKLSPVGIISNSI*VSFQLI Trigger: AATGAGCTGGAAAGAAACCCAAATGGAGTTGCTGAT...GATTCCAACAGGACTGAGTTTTGCCAGCATTGCAAAGGAATCCAAGTGCCTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378803.5 |
||
| CDS-3UTR CCA 90 bp | CTGGGTTTCATTCCTTTGTACCTGGCAGATCTTGGTTTTGAGAAAAAGCCTAGGGGTGTAGGCATCTCCTaGAATCAGAATTTGTGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LGFIPLYLADLGFEKKPRGVGIS*NQNLCK Trigger: TTTGCACAAATTCTGATTCCAGGAGATGCCTACACC...CCTAGGCTTTTTCTCAAAACCAAGATCTGCCAGGTACAAAGGAATGAAACCCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000378803.5 |
||
| CDS-3UTR CCA 90 bp | AAAAGATGGAAGAGTCAAGTTACCGTTATTGCACATCTGGAGGCTACAGAAAGGATACGATCTTGTGGGTaGGATATCCAATCAGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KRWKSQVTVIAHLEATERIRSCG*DIQSEQ Trigger: CTGCTCTGATTGGATATCCCACCCACAAGATCGTAT...CCTTTCTGTAGCCTCCAGATGTGCAATAACGGTAACTTGACTCTTCCATCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378803.5 |
||
| CDS-3UTR CCA 90 bp | ATAACAGTCACCATACTGTTCTGCAATATTGGCCCATTGGGTAGAATTTGGTTCCCGTTATTGCACATCTaGAGGCTACAGAAAGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: ITVTILFCNIGPLGRIWFPLLHI*RLQKGT Trigger: AGTGCCTTTCTGTAGCCTCCAGATGTGCAATAACGG...GAACCAAATTCTACCCAATGGGCCAATATTGCAGAACAGTATGGTGACTGTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378803.5 |
||
| CDS-3UTR CCA 90 bp | GGGAAAGGAATCAGCAATGATCAGAGCAAAACAATTCTAGAAGGCATCTTAATTTTCTTCCATCAGGTGTaGGGGAGATGTGGCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GKGISNDQSKTILEGILIFFHQV*GRCGFL Trigger: CAGGAAGCCACATCTCCCCCACACCTGATGGAAGAA...AATTAAGATGCCTTCTAGAATTGTTTTGCTCTGATCATTGCTGATTCCTTTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000451199.5 |
||
| 3UTR CAA 72 bp | ATAACAGTCACCATACTGTTCTGCAATATTGGCCCATaGGGTAGAATTTGGTTCCCAGATGTCTGGGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ITVTILFCNIGP*GRIWFPDVWVS Trigger: TGAAACCCAGACATCTGGGAACCAAATTCTACCCAATGGGCCAATATTGCAGAACAGTATGGTGACTGTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378803.5 |
||
| CDS-3UTR TCA 90 bp | TACACCAGTACAAATGAAAGGTCTTGGTGTCCACCTTGTCTCACTTTGAAAGGCCACCTTGTCTCACTTTaGAAGGCAGACAAACAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: YTSTNERSWCPPCLTLKGHLVSL*KADKQK Trigger: TTTTTGTTTGTCTGCCTTTCAAAGTGAGACAAGGTG...GCCTTTCAAAGTGAGACAAGGTGGACACCAAGACCTTTCATTTGTACTGGTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378803.5 |
||
| CDS-3UTR CCA 90 bp | ATGTTTGTCATAACAGTCACCATACTGTTCTGCAATATTGGCCCATTGGGTAGAGCAATATTGGCCCATTaGGTAGAATTTGGTTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: MFVITVTILFCNIGPLGRAILAH*VEFGSQ Trigger: CTGGGAACCAAATTCTACCCAATGGGCCAATATTGC...TCTACCCAATGGGCCAATATTGCAGAACAGTATGGTGACTGTTATGACAAACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378803.5 |
||
| CDS-3UTR TCA 90 bp | TATTATGGGTATACGATCTTGTGGGTGGGATATCCAATCAGAGCAGCCAAAGAGTTTTGTTTCTGCATTTaGATACAACCCCATAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: YYGYTILWVGYPIRAAKEFCFCI*IQPHKT Trigger: GGTCTTATGGGGTTGTATTCAAATGCAGAAACAAAA...CTCTTTGGCTGCTCTGATTGGATATCCCACCCACAAGATCGTATACCCATAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378803.5 |
||
| CDS-3UTR TCA 90 bp | AAGCTAGACAAATACAACTACACCAGTACAAATGAAAGGTCTTGGTGTCCACCTACTGAAGAACCATACTaGGTATCTCCCACAAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: KLDKYNYTSTNERSWCPPTEEPY*VSPTRS Trigger: ACTTCTTGTGGGAGATACTCAGTATGGTTCTTCAGT...AGGTGGACACCAAGACCTTTCATTTGTACTGGTGTAGTTGTATTTGTCTAGCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378803.5 |
||
| CDS-3UTR TCA 90 bp | AAGCTAGACAAATACAACTACACCAGTACAAATGAAAGGTCTTGGTGTCCACCTAGCCCATATATCGACTaGAGAACCATACTGAGTATC | + |
|
Preference number: 4 (lower is better) Translates to: KLDKYNYTSTNERSWCPPSPYID*RTILSI Trigger: GATACTCAGTATGGTTCTTCAGTCGATATATGGGCT...AGGTGGACACCAAGACCTTTCATTTGTACTGGTGTAGTTGTATTTGTCTAGCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378803.5 |
||
| CDS-3UTR TCA 90 bp | AGCAATGATCAGAGCAAAACAATTCTAGAAGGCATCTTAATTTTCATATGGCTCCTGGCTCAGGTATACTaGTGCCATGGAAAAACCCGT | + |
|
Preference number: 4 (lower is better) Translates to: SNDQSKTILEGILIFIWLLAQVY*CHGKTR Trigger: ACGGGTTTTTCCATGGCATCAGTATACCTGAGCCAG...GAGCCATATGAAAATTAAGATGCCTTCTAGAATTGTTTTGCTCTGATCATTGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000451199.5 |
||
| CDS-3UTR GCA 90 bp | CTGGGTTTCATTCCTTTGTACCTGGCAGATCTTGGTTTTGAGAAAAAGCCTAGGTGGAATCAGAATTTGTaGAAACCCGAAGTCACAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LGFIPLYLADLGFEKKPRWNQNL*KPEVTN Trigger: ATTTGTGACTTCGGGTTTGCACAAATTCTGATTCCA...CCTAGGCTTTTTCTCAAAACCAAGATCTGCCAGGTACAAAGGAATGAAACCCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378803.5 |
||
| CDS-3UTR GCA 90 bp | AAGCTAGACAAATACAACTACACCAGTACAAATGAAAGGTCTTGGTGTCCACCTTCAAGTTACCGTTATTaGACATCTGGAGGCTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: KLDKYNYTSTNERSWCPPSSYRY*TSGGYR Trigger: TCTGTAGCCTCCAGATGTGCAATAACGGTAACTTGA...AGGTGGACACCAAGACCTTTCATTTGTACTGGTGTAGTTGTATTTGTCTAGCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378803.5 |
||
| CDS-3UTR GCA 90 bp | ATAAGCTCACAAATTCTCCATATAGATAGCCTCGGGAGGGGCTGCTCTGATGAATGTCTCTTCCATATGTaGAGTTTTAGGCTTTATAAC | + |
|
Preference number: 4 (lower is better) Translates to: ISSQILHIDSLGRGCSDECLFHM*SFRLYN Trigger: GTTATAAAGCCTAAAACTGCACATATGGAAGAGACA...TTCATCAGAGCAGCCCCTCCCGAGGCTATCTATATGGAGAATTTGTGAGCTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451199.5 |
||
| CDS-3UTR GCA 90 bp | GGGAAAGGAATCAGCAATGATCAGAGCAAAACAATTCTAGAAGGCATCTTAATTAGCCTCGGGAGGGGCTaGTCTGATGAAATTGAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: GKGISNDQSKTILEGILISLGRG*SDEIEN Trigger: ATTTTCAATTTCATCAGAGCAGCCCCTCCCGAGGCT...AATTAAGATGCCTTCTAGAATTGTTTTGCTCTGATCATTGCTGATTCCTTTCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000451199.5 |
||
| CDS-3UTR TCA 90 bp | ATAACAGTCACCATACTGTTCTGCAATATTGGCCCATTGGGTAGAATTTGGTTCAGTTGCGTAACGATTTaGTTCAGGTGTGTTTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: ITVTILFCNIGPLGRIWFSCVTI*FRCVWN Trigger: ATTCCAAACACACCTGAATCAAATCGTTACGCAACT...GAACCAAATTCTACCCAATGGGCCAATATTGCAGAACAGTATGGTGACTGTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378803.5 |
||
| CDS-3UTR CCA 90 bp | TTGCAATGCTGGCAAAACTCAGTCCTGTTGGAATCAGCATTTTATTATATGAAGGGGTATACGATCTTGTaGGTGGGATATCCAATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LQCWQNSVLLESAFYYMKGYTIL*VGYPIR Trigger: TCTGATTGGATATCCCACCCACAAGATCGTATACCC...CTTCATATAATAAAATGCTGATTCCAACAGGACTGAGTTTTGCCAGCATTGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000378803.5 |
||
| CDS-3UTR TCA 90 bp | AACATGGGGAAAGGAATCAGCAATGATCAGAGCAAAACAATTCTAGAAGGCATCTTGCATTTGAAACACTaGGAATTCCTATCTCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: NMGKGISNDQSKTILEGILHLKH*EFLSHL Trigger: CAAGTGAGATAGGAATTCTCAGTGTTTCAAATGCAA...GATGCCTTCTAGAATTGTTTTGCTCTGATCATTGCTGATTCCTTTCCCCATGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451199.5 |
||
| CDS-3UTR CCA 90 bp | AAGCTAGACAAATACAACTACACCAGTACAAATGAAAGGTCTTGGTGTCCACCTGGTATACTGATGCCATaGAAAAACCCGTTACTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: KLDKYNYTSTNERSWCPPGILMP*KNPLLL Trigger: TAAAAGTAACGGGTTTTTCCATGGCATCAGTATACC...AGGTGGACACCAAGACCTTTCATTTGTACTGGTGTAGTTGTATTTGTCTAGCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378803.5 |
||
| CDS-3UTR CCA 90 bp | ATGGGGAAAGGAATCAGCAATGATCAGAGCAAAACAATTCTAGAAGGCATCTTAGGTATACTGATGCCATaGAAAAACCCGTTACTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: MGKGISNDQSKTILEGILGILMP*KNPLLL Trigger: TAAAAGTAACGGGTTTTTCCATGGCATCAGTATACC...TAAGATGCCTTCTAGAATTGTTTTGCTCTGATCATTGCTGATTCCTTTCCCCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000451199.5 |
||
| CDS CCA 90 bp | GAGGACTTGTTTTCTTCCATCAGGTGTGGGGGAGATGTGGCTTCCTaGTATGAGAGGCAACAGTTGATTCTGTTGGCGTCTTCTGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: EDLFSSIRCGGDVAS*YERQQLILLASSVS Trigger: AGAAACAGAAGACGCCAACAGAATCAACTGTTGCCTCTCATACCAGGAAGCCACATCTCCCCCACACCTGATGGAAGAAAACAAGTCCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000451199.5 |
||
| CDS-3UTR CAA 90 bp | TCTGGAGGCTACAGAAAGGCACTTGGATTCCTTTGCAATGCTGGCAAAACTCAGCTGGGTTTCATTCCTTaGTACCTGGCAGATCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SGGYRKALGFLCNAGKTQLGFIP*YLADLG Trigger: ACCAAGATCTGCCAGGTACAAAGGAATGAAACCCAG...CTGAGTTTTGCCAGCATTGCAAAGGAATCCAAGTGCCTTTCTGTAGCCTCCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378803.5 |
||
| CDS-3UTR CAA 90 bp | TGGAAGAGTCAAGTTACCGTTATTGCACATCTGGAGGCTACAGAAAGGCACTTGGCTACAGAAAGGCACTaGGATTCCTTTGCAATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: WKSQVTVIAHLEATERHLATERH*DSFAML Trigger: CAGCATTGCAAAGGAATCCAAGTGCCTTTCTGTAGC...CAAGTGCCTTTCTGTAGCCTCCAGATGTGCAATAACGGTAACTTGACTCTTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378803.5 |
||
| CDS TCA 90 bp | TGTCAGGAGCTCTGCAAAAACACAACCAATAGCCCATATATCGACTaGAGAACCATACTGAGTATCTCCCACAAGAAGTTCAGGAGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: CQELCKNTTNSPYID*RTILSISHKKFRSS Trigger: CGAGCTCCTGAACTTCTTGTGGGAGATACTCAGTATGGTTCTTCAGTCGATATATGGGCTATTGGTTGTGTTTTTGCAGAGCTCCTGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000378803.5 ENST00000395035.3 |
||
| CDS-3UTR CAA 90 bp | GTCAAGTTACCGTTATTGCACATCTGGAGGCTACAGAAAGGCACTTGGATTCCTTCCTGGAATCAGAATTaGTGCAAACCCGAAGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: VKLPLLHIWRLQKGTWIPSWNQN*CKPEVT Trigger: TGTGACTTCGGGTTTGCACAAATTCTGATTCCAGGA...AGGAATCCAAGTGCCTTTCTGTAGCCTCCAGATGTGCAATAACGGTAACTTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378803.5 |
||
| CDS-3UTR CAA 90 bp | ATAACAGTCACCATACTGTTCTGCAATATTGGCCCATTGGGTAGAATTTGGTTCGAGCGGAAGTACCTGTaGGCGTCTTCTGTTTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ITVTILFCNIGPLGRIWFERKYL*ASSVSS Trigger: GGAAGAAACAGAAGACGCCAACAGGTACTTCCGCTC...GAACCAAATTCTACCCAATGGGCCAATATTGCAGAACAGTATGGTGACTGTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378803.5 |
||
| CDS-3UTR CAA 90 bp | GACAAATACAACTACACCAGTACAAATGAAAGGTCTTGGTGTCCACCTTGTCTCGTCTTGGTGTCCACCTaGTCTCACTTTGAAAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: DKYNYTSTNERSWCPPCLVLVST*SHFERQ Trigger: CTGCCTTTCAAAGTGAGACAAGGTGGACACCAAGAC...GAGACAAGGTGGACACCAAGACCTTTCATTTGTACTGGTGTAGTTGTATTTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378803.5 |
||
| CDS-3UTR CAA 90 bp | TGGAAGAGTCAAGTTACCGTTATTGCACATCTGGAGGCTACAGAAAGGCACTTGCCACCTTGTCTCACTTaGAAAGGCAGACAAACAAAA | + |
|
Preference number: 5 (lower is better) Translates to: WKSQVTVIAHLEATERHLPPCLT*KGRQTK Trigger: TTTTGTTTGTCTGCCTTTCAAAGTGAGACAAGGTGG...CAAGTGCCTTTCTGTAGCCTCCAGATGTGCAATAACGGTAACTTGACTCTTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378803.5 |
||
| CDS-3UTR CAA 90 bp | AAAAGATGGAAGAGTCAAGTTACCGTTATTGCACATCTGGAGGCTACAGAAAGGGTCAAGTTACCGTTATaGCACATCTGGAGGCTACAG | + |
|
Preference number: 5 (lower is better) Translates to: KRWKSQVTVIAHLEATERVKLPL*HIWRLQ Trigger: CTGTAGCCTCCAGATGTGCAATAACGGTAACTTGAC...CCTTTCTGTAGCCTCCAGATGTGCAATAACGGTAACTTGACTCTTCCATCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378803.5 |
||
| CDS-3UTR CAA 90 bp | GGATATCCAATCAGAGCAGCCAAAGAGTTGCGTAACGATTTGATTCAGGTGTGTTGCAATATTGGCCCATaGGGTAGAATTTGGTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GYPIRAAKELRNDLIQVCCNIGP*GRIWFP Trigger: TGGGAACCAAATTCTACCCAATGGGCCAATATTGCA...ACACACCTGAATCAAATCGTTACGCAACTCTTTGGCTGCTCTGATTGGATATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378803.5 |
||
| CDS-3UTR CAA 90 bp | GCACATCTGGAGGCTACAGAAAGGCACTTGGATTCCTTTGCAATGCTGGCAAAATACTGTTCTGCAATATaGGCCCATTGGGTAGAATTT | + |
|
Preference number: 5 (lower is better) Translates to: AHLEATERHLDSFAMLAKYCSAI*AHWVEF Trigger: AAATTCTACCCAATGGGCCAATATTGCAGAACAGTA...TTTTGCCAGCATTGCAAAGGAATCCAAGTGCCTTTCTGTAGCCTCCAGATGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378803.5 |
||
| CDS-3UTR CAA 90 bp | AATCAAAGTATAAGCTCACAAATTCTCCATATAGATAGCCTCGGGAGGGGCTGCCAACAGTTGATTCTGTaGGCGTCTTCTGTTTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: NQSISSQILHIDSLGRGCQQLIL*ASSVSS Trigger: GGAAGAAACAGAAGACGCCAACAGAATCAACTGTTG...GCAGCCCCTCCCGAGGCTATCTATATGGAGAATTTGTGAGCTTATACTTTGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451199.5 |
||
| CDS-3UTR CAA 90 bp | AATCAAAGTATAAGCTCACAAATTCTCCATATAGATAGCCTCGGGAGGGGCTGCTATGAGAGGCAACAGTaGATTCTGTTGGCGTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: NQSISSQILHIDSLGRGCYERQQ*ILLASS Trigger: AGAAGACGCCAACAGAATCAACTGTTGCCTCTCATA...GCAGCCCCTCCCGAGGCTATCTATATGGAGAATTTGTGAGCTTATACTTTGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451199.5 |
||
| CDS-3UTR CAA 90 bp | AAAAGATGGAAGAGTCAAGTTACCGTTATTGCACATCTGGAGGCTACAGAAAGGCATCAGCAACTCCATTaGGGTTTCTTTCCAGCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: KRWKSQVTVIAHLEATERHQQLH*GFFPAH Trigger: ATGAGCTGGAAAGAAACCCAAATGGAGTTGCTGATG...CCTTTCTGTAGCCTCCAGATGTGCAATAACGGTAACTTGACTCTTCCATCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378803.5 |
||
| CDS-3UTR CAA 90 bp | GATGGAAGAGTCAAGTTACCGTTATTGCACATCTGGAGGCTACAGAAAGGCACTTTTAACAGCTACTACTaGTCCAGAGGTTTTGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: DGRVKLPLLHIWRLQKGTFNSYY*SRGFVS Trigger: AGAAACAAAACCTCTGGACAAGTAGTAGCTGTTAAA...AGTGCCTTTCTGTAGCCTCCAGATGTGCAATAACGGTAACTTGACTCTTCCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378803.5 |
||
| CDS-3UTR CAA 90 bp | GTCATAACAGTCACCATACTGTTCTGCAATATTGGCCCATTGGGTAGAATTTGGGAGTTGCGTAACGATTaGATTCAGGTGTGTTTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: VITVTILFCNIGPLGRIWELRND*IQVCLE Trigger: TTCCAAACACACCTGAATCAAATCGTTACGCAACTC...CCAAATTCTACCCAATGGGCCAATATTGCAGAACAGTATGGTGACTGTTATGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378803.5 |
||
| CDS-3UTR CAA 90 bp | ATGTTTGTCATAACAGTCACCATACTGTTCTGCAATATTGGCCCATTGGGTAGATATGGGTATACGATCTaGTGGGTGGGATATCCAATC | + |
|
Preference number: 5 (lower is better) Translates to: MFVITVTILFCNIGPLGRYGYTI*WVGYPI Trigger: GATTGGATATCCCACCCACAAGATCGTATACCCATA...TCTACCCAATGGGCCAATATTGCAGAACAGTATGGTGACTGTTATGACAAACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378803.5 |
||
| CDS-3UTR CAA 90 bp | ATGTTTGTCATAACAGTCACCATACTGTTCTGCAATATTGGCCCATTGGGTAGATGCCATAATACGCTTTaGATCACTCCATCAGCAACT | + |
|
Preference number: 5 (lower is better) Translates to: MFVITVTILFCNIGPLGRCHNTL*ITPSAT Trigger: AGTTGCTGATGGAGTGATCAAAAGCGTATTATGGCA...TCTACCCAATGGGCCAATATTGCAGAACAGTATGGTGACTGTTATGACAAACAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378803.5 |
||
| CDS-3UTR CAA 90 bp | AAGCTAGACAAATACAACTACACCAGTACAAATGAAAGGTCTTGGTGTCCACCTTGGCAGATCTTGGTTTaGAGAAAAAGCCTAGGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: KLDKYNYTSTNERSWCPPWQILV*RKSLGK Trigger: CTTTCCTAGGCTTTTTCTCAAAACCAAGATCTGCCA...AGGTGGACACCAAGACCTTTCATTTGTACTGGTGTAGTTGTATTTGTCTAGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378803.5 |
||
| CDS-3UTR CAA 90 bp | TTGCAATGCTGGCAAAACTCAGTCCTGTTGGAATCAGCATTTTATTATATGAAGACTTGTCCAGAGGTTTaGTTTCTGCATTTGAATACA | + |
|
Preference number: 5 (lower is better) Translates to: LQCWQNSVLLESAFYYMKTCPEV*FLHLNT Trigger: TGTATTCAAATGCAGAAACAAAACCTCTGGACAAGT...CTTCATATAATAAAATGCTGATTCCAACAGGACTGAGTTTTGCCAGCATTGCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378803.5 |
||
| CDS TCA 72 bp | TTCCATCAGGTGTGGGGGAGATGTGGCTTCCTGGTATaGGAGGCAACAGTTGATTCTGTTGGCGTCTTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: FHQVWGRCGFLV*EATVDSVGVFC Trigger: ACAGAAGACGCCAACAGAATCAACTGTTGCCTCTCATACCAGGAAGCCACATCTCCCCCACACCTGATGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000451199.5 |
||
| CDS CCA 72 bp | TTTTCTTCCATCAGGTGTGGGGGAGATGTGGCTTCCTaGTATGAGAGGCAACAGTTGATTCTGTTGGCGTCT | + |
|
Preference number: 6 (lower is better) Translates to: FSSIRCGGDVAS*YERQQLILLAS Trigger: AGACGCCAACAGAATCAACTGTTGCCTCTCATACCAGGAAGCCACATCTCCCCCACACCTGATGGAAGAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000451199.5 |
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| CDS CAA 90 bp | CCAGATGTCTGGGTTTCATTCCTTTGTACCTGGCAGATCTTGGTTTaGAGAAAAAGCCTAGGAAAGGCAGACTTAGGTGCCTGCTGTTGG | + |
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Preference number: 6 (lower is better) Translates to: PDVWVSFLCTWQILV*RKSLGKADLGACCW Trigger: CCAACAGCAGGCACCTAAGTCTGCCTTTCCTAGGCTTTTTCTCAAAACCAAGATCTGCCAGGTACAAAGGAATGAAACCCAGACATCTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000395035.3 |
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| CDS TCA 72 bp | CAACCAATAGCCCATATATCGACTGAAGAACCATACTaGGTATCTCCCACAAGAAGTTCAGGAGCTCGGTAC | + |
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Preference number: 6 (lower is better) Translates to: QPIAHISTEEPY*VSPTRSSGARY Trigger: GTACCGAGCTCCTGAACTTCTTGTGGGAGATACTCAGTATGGTTCTTCAGTCGATATATGGGCTATTGGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378803.5 ENST00000395035.3 |
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| CDS TCA 72 bp | CTCTGCAAAAACACAACCAATAGCCCATATATCGACTaGAGAACCATACTGAGTATCTCCCACAAGAAGTTC | + |
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Preference number: 6 (lower is better) Translates to: LCKNTTNSPYID*RTILSISHKKF Trigger: GAACTTCTTGTGGGAGATACTCAGTATGGTTCTTCAGTCGATATATGGGCTATTGGTTGTGTTTTTGCAGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000378803.5 ENST00000395035.3 |
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| CDS CAA 72 bp | TTTTATAGCACTTTAACTTTTGAGCGGAAGTACCTGTaGGCGTCTTCTGTTTCTTCCTTCATTACGTGCTTT | + |
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Preference number: 6 (lower is better) Translates to: FYSTLTFERKYL*ASSVSSFITCF Trigger: AAAGCACGTAATGAAGGAAGAAACAGAAGACGCCAACAGGTACTTCCGCTCAAAAGTTAAAGTGCTATAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378803.5 |
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