RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDH23 (Homo sapiens)

Ensembl gene IDs: ENSG00000107736

Ensembl transcript IDs: ENST00000224721.12, ENST00000299366.11, ENST00000398788.4, ENST00000398792.3, ENST00000398809.9, ENST00000442677.4, ENST00000461841.7, ENST00000466757.8, ENST00000470494.5, ENST00000475158.1, ENST00000616684.4, ENST00000619887.4, ENST00000642965.1, ENST00000643732.1, ENST00000644511.1, ENST00000646131.1, ENST00000647092.1

Found 3184 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCTCGGCAGCGGTCAGCGTCTCCAGCGAGCGGCCCAGGCCCTTCTaGTCTTCCTCGGGCAGGCTGTTGAGGTCGGTGGCCAGCAGCGTG +
Preference number: 1 (lower is better)
Translates to: ASAAVSVSSERPRPF*SSSGRLLRSVASSV
Trigger: CACGCTGCTGGCCACCGACCTCAACAGCCTGCCCGAGGAAGACCAGAAGGGCCTGGGCCGCTCGCTGGAGACGCTGACCGCTGCCGAGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 90 bp CCCTTTCCTGCCCGCCTCCTGGTCCCGATGCAGGGAGGGGAGCATTaGCAGCCTCCCACGCTTCTGTCCCTCCCAAGCCCGGGAGCCTGC +
Preference number: 1 (lower is better)
Translates to: PFPARLLVPMQGGEH*QPPTLLSLPSPGAC
Trigger: GCAGGCTCCCGGGCTTGGGAGGGACAGAAGCGTGGGAGGCTGGCAATGCTCCCCTCCCTGCATCGGGACCAGGAGGCGGGCAGGAAAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR GCA 90 bp GGCAGGCTGTTGAGGTCGGTGGCCAGCAGCGTGCCCGTGCTGCCGTaGACCACATGGATCCCATCGGGCCCCTTGAGCTCCACTGGTGGC +
Preference number: 1 (lower is better)
Translates to: GRLLRSVASSVPVLP*TTWIPSGPLSSTGG
Trigger: GCCACCAGTGGAGCTCAAGGGGCCCGATGGGATCCATGTGGTGCACGGCAGCACGGGCACGCTGCTGGCCACCGACCTCAACAGCCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 90 bp GTGTGGATTTGGCGGATTCTGTGCGGGCGTTGCGCTCGAAGGCAGTaGCCTCGGCAGCGGTCAGCGTCTCCAGCGAGCGGCCCAGGCCCT +
Preference number: 1 (lower is better)
Translates to: VWIWRILCGRCARRQ*PRQRSASPASGPGP
Trigger: AGGGCCTGGGCCGCTCGCTGGAGACGCTGACCGCTGCCGAGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAATCCACAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 90 bp TGCACAGCTTCCGCCATGGCCGGCCCACCGTCCCTCGACAGCCCCTaGCGGGCCCCGAGGACAACCGCAGCCACTGTGACTACATGGAAT +
Preference number: 1 (lower is better)
Translates to: CTASAMAGPPSLDSP*RAPRTTAATVTTWN
Trigger: ATTCCATGTAGTCACAGTGGCTGCGGTTGTCCTCGGGGCCCGGCAGGGGCTGTCGAGGGACGGTGGGCCGGCCATGGCGGAAGCTGTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR GCA 90 bp TGCATCTTCCTCCTGCTGGCCACCTGTCTGCTGTTCATGACGCTCTaGAAGCCGGCCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAG +
Preference number: 1 (lower is better)
Translates to: CIFLLLATCLLFMTL*KPAALDPSRRRAHE
Trigger: CTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGGCCGGCTTGCAGAGCGTCATGAACAGCAGACAGGTGGCCAGCAGGAGGAAGATGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR CCA 90 bp GCCTCCCACGCTTCTGTCCCTCCCAAGCCCGGGAGCCTGCCCCAGTaGGCAGGCCCAGATTCCCTGTTTGGCTCAGCCTCCGAGTCGGAA +
Preference number: 1 (lower is better)
Translates to: ASHASVPPKPGSLPQ*AGPDSLFGSASESE
Trigger: TTCCGACTCGGAGGCTGAGCCAAACAGGGAATCTGGGCCTGCCCACTGGGGCAGGCTCCCGGGCTTGGGAGGGACAGAAGCGTGGGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CCA 90 bp GCCGTGCACCACATGGATCCCATCGGGCCCCTTGAGCTCCACTGGTaGCTTGTGGCGGAAGCGCAGGCTACCCTGCCCTGGGCTGTGGTC +
Preference number: 1 (lower is better)
Translates to: AVHHMDPIGPLELHW*LVAEAQATLPWAVV
Trigger: GACCACAGCCCAGGGCAGGGTAGCCTGCGCTTCCGCCACAAGCCACCAGTGGAGCTCAAGGGGCCCGATGGGATCCATGTGGTGCACGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 90 bp GCTGCCGTGCACCACATGGATCCCATCGGGCCCCTTGAGCTCCACTaGTGGCTTGTGGCGGAAGCGCAGGCTACCCTGCCCTGGGCTGTG +
Preference number: 1 (lower is better)
Translates to: AAVHHMDPIGPLELH*WLVAEAQATLPWAV
Trigger: CACAGCCCAGGGCAGGGTAGCCTGCGCTTCCGCCACAAGCCACCAGTGGAGCTCAAGGGGCCCGATGGGATCCATGTGGTGCACGGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 90 bp TTGAGGTCGGTGGCCAGCAGCGTGCCCGTGCTGCCGTGCACCACATaGATCCCATCGGGCCCCTTGAGCTCCACTGGTGGCTTGTGGCGG +
Preference number: 1 (lower is better)
Translates to: LRSVASSVPVLPCTT*IPSGPLSSTGGLWR
Trigger: CCGCCACAAGCCACCAGTGGAGCTCAAGGGGCCCGATGGGATCCATGTGGTGCACGGCAGCACGGGCACGCTGCTGGCCACCGACCTCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 90 bp CCCCGACCGGCCCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTaGATGGGTGCTGCTCACACCCACAAGGCTTCCCTGTCTAGTCAC +
Preference number: 1 (lower is better)
Translates to: PRPALSLPLLPGRGR*MGAAHTHKASLSSH
Trigger: GTGACTAGACAGGGAAGCCTTGTGGGTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGGGCCGGTCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 90 bp ACCACATGGATCCCATCGGGCCCCTTGAGCTCCACTGGTGGCTTGTaGCGGAAGCGCAGGCTACCCTGCCCTGGGCTGTGGTCTCCTGGC +
Preference number: 1 (lower is better)
Translates to: TTWIPSGPLSSTGGL*RKRRLPCPGLWSPG
Trigger: GCCAGGAGACCACAGCCCAGGGCAGGGTAGCCTGCGCTTCCGCCACAAGCCACCAGTGGAGCTCAAGGGGCCCGATGGGATCCATGTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 90 bp GGCCCTCATCTGCATCCACTGCGCCTGTCACGTTGCCCACGAGGGTaGCGCGTGGTGAGTGCTCAGGCACTGTCAGCAGCTGGTACTGGG +
Preference number: 1 (lower is better)
Translates to: GPHLHPLRLSRCPRG*RVVSAQALSAAGTG
Trigger: CCCAGTACCAGCTGCTGACAGTGCCTGAGCACTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCAGATGAGGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 90 bp CGATCGCGTTGGGGCCCTCATCTGCATCCACTGCGCCTGTCACGTTaGCCACGAGGGTGCCGCGTGGTGAGTGCTCAGGCACTGTCAGCA +
Preference number: 1 (lower is better)
Translates to: RSRWGPHLHPLRLSR*PRGCRVVSAQALSA
Trigger: TGCTGACAGTGCCTGAGCACTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCAGATGAGGGCCCCAACGCGATCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 90 bp GCCGGCTGCGATGAAGTAGTACACGATCGCGTTGGGGCCCTCATCTaGATCCACTGCGCCTGTCACGTTGCCCACGAGGGTGCCGCGTGG +
Preference number: 1 (lower is better)
Translates to: AGCDEVVHDRVGALI*IHCACHVAHEGAAW
Trigger: CCACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCAGATGAGGGCCCCAACGCGATCGTGTACTACTTCATCGCAGCCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 90 bp CCCTTGAGCTCCACTGGTGGCTTGTGGCGGAAGCGCAGGCTACCCTaGCCTGGGCTGTGGTCTCCTGGCTCCTCGTCCAGCTCAGTCTGT +
Preference number: 1 (lower is better)
Translates to: PLSSTGGLWRKRRLP*PGLWSPGSSSSSVC
Trigger: ACAGACTGAGCTGGACGAGGAGCCAGGAGACCACAGCCCAGGGCAGGGTAGCCTGCGCTTCCGCCACAAGCCACCAGTGGAGCTCAAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 90 bp TCCAGGGCCACCTGCAGCGGCTGCATAGTCTCGTATGGCACTGGCTaGCCCAGGTCGCTGGCCACCAAGATGAGGCTGTACACCGCCTGC +
Preference number: 1 (lower is better)
Translates to: SRATCSGCIVSYGTG*PRSLATKMRLYTAC
Trigger: GCAGGCGGTGTACAGCCTCATCTTGGTGGCCAGCGACCTGGGCCAGCCAGTGCCATACGAGACTATGCAGCCGCTGCAGGTGGCCCTGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 90 bp AACGCGCACCTCCTGCAGTGTGAGGTCAGCAACCAGGTCGAGGGTTaGGGAGGGTCCACGGGGAGGTGTCCAGCTGCGATTGCTGGAGGC +
Preference number: 1 (lower is better)
Translates to: NAHLLQCEVSNQVEG*GGSTGRCPAAIAGG
Trigger: GCCTCCAGCAATCGCAGCTGGACACCTCCCCGTGGACCCTCCCCAACCCTCGACCTGGTTGCTGACCTCACACTGCAGGAGGTGCGCGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 90 bp GACCGGCCCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATaGGTGCTGCTCACACCCACAAGGCTTCCCTGTCTAGTCACAGCT +
Preference number: 1 (lower is better)
Translates to: DRPCPCPCSLGGDGG*VLLTPTRLPCLVTA
Trigger: AGCTGTGACTAGACAGGGAAGCCTTGTGGGTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGGGCCGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR TCA 90 bp ACCACACTGGGCCTGCACTCCGGCACTGACAGCACCATTCTGGGCTaGGGCCCCTCCACTTCCTTGAGAGGGCCCAGCCAGTGCTCTCCA +
Preference number: 1 (lower is better)
Translates to: TTLGLHSGTDSTILG*GPSTSLRGPSQCSP
Trigger: TGGAGAGCACTGGCTGGGCCCTCTCAAGGAAGTGGAGGGGCCTCAGCCCAGAATGGTGCTGTCAGTGCCGGAGTGCAGGCCCAGTGTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR TCA 90 bp CCCGGTTGCCCGCAGTCTTCAGGAAGCTGTAGCGCACCGCCCCGTTaGGGCCCTCATCCTTGTCCGTGGCGTAGACCTCGTACACGTTGG +
Preference number: 1 (lower is better)
Translates to: PGCPQSSGSCSAPPR*GPHPCPWRRPRTRW
Trigger: CCAACGTGTACGAGGTCTACGCCACGGACAAGGATGAGGGCCTCAACGGGGCGGTGCGCTACAGCTTCCTGAAGACTGCGGGCAACCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR TCA 90 bp TGCATCCACTGCGCCTGTCACGTTGCCCACGAGGGTGCCGCGTGGTaGGTGCTCAGGCACTGTCAGCAGCTGGTACTGGGGGCTGCCTTT +
Preference number: 1 (lower is better)
Translates to: CIHCACHVAHEGAAW*VLRHCQQLVLGAAF
Trigger: AAAGGCAGCCCCCAGTACCAGCTGCTGACAGTGCCTGAGCACTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 90 bp AGGGGTTCGTTGTCATCGATGTCCTCCAGGGCCACCTGCAGCGGCTaGATAGTCTCGTATGGCACTGGCTGGCCCAGGTCGCTGGCCACC +
Preference number: 1 (lower is better)
Translates to: RGSLSSMSSRATCSG*IVSYGTGWPRSLAT
Trigger: GGTGGCCAGCGACCTGGGCCAGCCAGTGCCATACGAGACTATGCAGCCGCTGCAGGTGGCCCTGGAGGACATCGATGACAACGAACCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 90 bp TCCACTGCGCCTGTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGTaGTCAGGCACTGTCAGCAGCTGGTACTGGGGGCTGCCTTTTGGA +
Preference number: 1 (lower is better)
Translates to: STAPVTLPTRVPRGE*SGTVSSWYWGLPFG
Trigger: TCCAAAAGGCAGCCCCCAGTACCAGCTGCTGACAGTGCCTGAGCACTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAGTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 90 bp GAAGTTTGTGCAGGGGTGTGGATTTGGCGGATTCTGTGCGGGCGTTaGGCTCGAAGGCAGTGGCCTCGGCAGCGGTCAGCGTCTCCAGCG +
Preference number: 1 (lower is better)
Translates to: EVCAGVWIWRILCGR*ARRQWPRQRSASPA
Trigger: CGCTGGAGACGCTGACCGCTGCCGAGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAATCCACACCCCTGCACAAACTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 90 bp TCACGTCGCGAAGTTTGTGCAGGGGTGTGGATTTGGCGGATTCTGTaGGGGCGTTGCGCTCGAAGGCAGTGGCCTCGGCAGCGGTCAGCG +
Preference number: 1 (lower is better)
Translates to: SRREVCAGVWIWRIL*GRCARRQWPRQRSA
Trigger: CGCTGACCGCTGCCGAGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAATCCACACCCCTGCACAAACTTCGCGACGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 90 bp CTGGACGTCCAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTaGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGG +
Preference number: 1 (lower is better)
Translates to: LDVQQRGMWRKCSET*TGVGCPASRGCPRW
Trigger: CCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTGGACGTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR CCA 90 bp GAGCTCCACTGGTGGCTTGTGGCGGAAGCGCAGGCTACCCTGCCCTaGGCTGTGGTCTCCTGGCTCCTCGTCCAGCTCAGTCTGTATCAG +
Preference number: 1 (lower is better)
Translates to: ELHWWLVAEAQATLP*AVVSWLLVQLSLYQ
Trigger: CTGATACAGACTGAGCTGGACGAGGAGCCAGGAGACCACAGCCCAGGGCAGGGTAGCCTGCGCTTCCGCCACAAGCCACCAGTGGAGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR TCA 90 bp CTTTCTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTaGCCCCCTCCCCATGCTCATCGCCCTGGCCTGCATCTTCCTCCT +
Preference number: 1 (lower is better)
Translates to: LSLSSRHSRDPCRGN*PPPHAHRPGLHLPP
Trigger: AGGAGGAAGATGCAGGCCAGGGCGATGAGCATGGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAGAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR TCA 90 bp CAGGTAGACAGGGATCTCAGCTGCCCGGGGCGGGGACCCGTTGTCTaGGGCCCTCACGGTAAAGTTGAGCCAGTGCACCTCCTCGTAGTC +
Preference number: 1 (lower is better)
Translates to: QVDRDLSCPGRGPVV*GPHGKVEPVHLLVV
Trigger: GACTACGAGGAGGTGCACTGGCTCAACTTTACCGTGAGGGCCTCAGACAACGGGTCCCCGCCCCGGGCAGCTGAGATCCCTGTCTACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 90 bp GGTGTAGGTGACCAGCCCATTAAGGCCCTTGTCAGGGTCCACGGCTaGCACAGCAATGAGTGTGGTCCCAGGGGTGGCCCCCTCCAGGAT +
Preference number: 1 (lower is better)
Translates to: GVGDQPIKALVRVHG*HSNECGPRGGPLQD
Trigger: ATCCTGGAGGGGGCCACCCCTGGGACCACACTCATTGCTGTGGCAGCCGTGGACCCTGACAAGGGCCTTAATGGGCTGGTCACCTACACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 90 bp CACAGGTCGGCGATCTCACTCAGGTTCTCCGGTAGGTCATCCTCATaGTCCGCCTGGGCGGCCAGCTCCAGGTTCCGACAGAAGGGATCC +
Preference number: 1 (lower is better)
Translates to: HRSAISLRFSGRSSS*SAWAASSRFRQKGS
Trigger: GGATCCCTTCTGTCGGAACCTGGAGCTGGCCGCCCAGGCGGAGCATGAGGATGACCTACCGGAGAACCTGAGTGAGATCGCCGACCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 90 bp TCGAGGAGGCTCCCTTCAGAGGCCAGGGCGGGTGCTGTGACAGAGTaGCAAGAGGCAGGGCATTTCCAGCAGCTGGAGGTGATGCCACCT +
Preference number: 1 (lower is better)
Translates to: SRRLPSEARAGAVTE*QEAGHFQQLEVMPP
Trigger: AGGTGGCATCACCTCCAGCTGCTGGAAATGCCCTGCCTCTTGCCACTCTGTCACAGCACCCGCCCTGGCCTCTGAAGGGAGCCTCCTCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CCA 90 bp CTTGTGGCGGAAGCGCAGGCTACCCTGCCCTGGGCTGTGGTCTCCTaGCTCCTCGTCCAGCTCAGTCTGTATCAGCTTGATTGGCCCCTC +
Preference number: 1 (lower is better)
Translates to: LVAEAQATLPWAVVS*LLVQLSLYQLDWPL
Trigger: GAGGGGCCAATCAAGCTGATACAGACTGAGCTGGACGAGGAGCCAGGAGACCACAGCCCAGGGCAGGGTAGCCTGCGCTTCCGCCACAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647092.1
3UTR CCA 90 bp ACTGGTGGCTTGTGGCGGAAGCGCAGGCTACCCTGCCCTGGGCTGTaGTCTCCTGGCTCCTCGTCCAGCTCAGTCTGTATCAGCTCAGAG +
Preference number: 1 (lower is better)
Translates to: TGGLWRKRRLPCPGL*SPGSSSSSVCISSE
Trigger: CTCTGAGCTGATACAGACTGAGCTGGACGAGGAGCCAGGAGACCACAGCCCAGGGCAGGGTAGCCTGCGCTTCCGCCACAAGCCACCAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR TCA 90 bp CCCCGAAGCTCCTTGCATGCCCAGGCCAGCGCCCTTTCCCAAAGATaGTCCTCAGAAGAGCACCTTCCTCTCTGCAGACCCCCTCGCTGC +
Preference number: 1 (lower is better)
Translates to: PRSSLHAQASALSQR*SSEEHLPLCRPPRC
Trigger: GCAGCGAGGGGGTCTGCAGAGAGGAAGGTGCTCTTCTGAGGATCATCTTTGGGAAAGGGCGCTGGCCTGGGCATGCAAGGAGCTTCGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR TCA 90 bp CTCGGGCCACAATGTCCACCACGAAGTAGCCGGGGCTGTAGGCCATaGAGAGGTCGAAGGTGCGCAGAATGCCGTCCATGCTCCCCATGG +
Preference number: 1 (lower is better)
Translates to: LGPQCPPRSSRGCRP*RGRRCAECRPCSPW
Trigger: CCATGGGGAGCATGGACGGCATTCTGCGCACCTTCGACCTCTTCATGGCCTACAGCCCCGGCTACTTCGTGGTGGACATTGTGGCCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 90 bp CGTGGTGGCTGGTCGTTGATGTCCTCTAGCACAACGCGCACCTCCTaGAGTGTGAGGTCAGCAACCAGGTCGAGGGTTGGGGAGGGTCCA +
Preference number: 1 (lower is better)
Translates to: RGGWSLMSSSTTRTS*SVRSATRSRVGEGP
Trigger: TGGACCCTCCCCAACCCTCGACCTGGTTGCTGACCTCACACTGCAGGAGGTGCGCGTTGTGCTAGAGGACATCAACGACCAGCCACCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 90 bp GTCCCTCAGGATGTAGATGCCGATGATGGCCGTGTCGTTGTGGCCTaGCAGGTCTCGGGCCACAATGTCCACCACGAAGTAGCCGGGGCT +
Preference number: 1 (lower is better)
Translates to: VPQDVDADDGRVVVA*QVSGHNVHHEVAGA
Trigger: AGCCCCGGCTACTTCGTGGTGGACATTGTGGCCCGAGACCTGGCAGGCCACAACGACACGGCCATCATCGGCATCTACATCCTGAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 90 bp GGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTaGTCCCCAGACTCTTGGGCCCCAGTGACCCTCCTTACCTTGTCC +
Preference number: 1 (lower is better)
Translates to: GGGPVWPLSAQPEPS*SPDSWAPVTLLTLS
Trigger: GGACAAGGTAAGGAGGGTCACTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
3UTR CCA 90 bp AGGTCCCCAGGGAGCCAGTCCAGAGTGATCCAGCTGCAAAGCCCTTaGGAAGAGCCAGGAGCAAATCCTCGGGAGGCACCACCAGAGGCT +
Preference number: 1 (lower is better)
Translates to: RSPGSQSRVIQLQSP*EEPGANPREAPPEA
Trigger: AGCCTCTGGTGGTGCCTCCCGAGGATTTGCTCCTGGCTCTTCCCAAGGGCTTTGCAGCTGGATCACTCTGGACTGGCTCCCTGGGGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
3UTR CCA 90 bp GGCAATGACCTTCCCTGCCGAGGAGTCCTCCAGCTGGACATACCCTaGGGGCACCAGGTCCAGCAGGGTGTAGGTGACCAGCCCATTAAG +
Preference number: 1 (lower is better)
Translates to: GNDLPCRGVLQLDIP*GHQVQQGVGDQPIK
Trigger: CTTAATGGGCTGGTCACCTACACCCTGCTGGACCTGGTGCCCCCAGGGTATGTCCAGCTGGAGGACTCCTCGGCAGGGAAGGTCATTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 90 bp ATCGATGTCCTCCAGGGCCACCTGCAGCGGCTGCATAGTCTCGTATaGCACTGGCTGGCCCAGGTCGCTGGCCACCAAGATGAGGCTGTA +
Preference number: 1 (lower is better)
Translates to: IDVLQGHLQRLHSLV*HWLAQVAGHQDEAV
Trigger: TACAGCCTCATCTTGGTGGCCAGCGACCTGGGCCAGCCAGTGCCATACGAGACTATGCAGCCGCTGCAGGTGGCCCTGGAGGACATCGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 90 bp CTTGTGGCGGAAGCGCAGGCTACCCTGCCCTGGGCTGTGGTCTCCTaGCTCCTCGTCCAGCTCAGTCTGTATCAGCTCAGAGATGGAGGA +
Preference number: 1 (lower is better)
Translates to: LVAEAQATLPWAVVS*LLVQLSLYQLRDGG
Trigger: TCCTCCATCTCTGAGCTGATACAGACTGAGCTGGACGAGGAGCCAGGAGACCACAGCCCAGGGCAGGGTAGCCTGCGCTTCCGCCACAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR TCA 90 bp GTTGTTGCCAATGTCTGCATCCAGGGCCAGCACCTGGATCAACTCTaGGCCCACCTTGGCGTCGGTGGCCACCCCTGCAGTGTACTCAGC +
Preference number: 1 (lower is better)
Translates to: VVANVCIQGQHLDQL*AHLGVGGHPCSVLS
Trigger: GCTGAGTACACTGCAGGGGTGGCCACCGACGCCAAGGTGGGCTCAGAGTTGATCCAGGTGCTGGCCCTGGATGCAGACATTGGCAACAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 90 bp CTCACGAAAAGGGGTTCGTTGTCATCGATGTCCTCCAGGGCCACCTaGAGCGGCTGCATAGTCTCGTATGGCACTGGCTGGCCCAGGTCG +
Preference number: 1 (lower is better)
Translates to: LTKRGSLSSMSSRAT*SGCIVSYGTGWPRS
Trigger: CGACCTGGGCCAGCCAGTGCCATACGAGACTATGCAGCCGCTGCAGGTGGCCCTGGAGGACATCGATGACAACGAACCCCTTTTCGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 90 bp CTGGATGGCAGCCCGCAGGTATCGGTCATCATCAGGCTTGACAGCTaGTGGCTCACGCCCAAAAGTTCCATGGGTGCGCGTGGGGCTGTT +
Preference number: 1 (lower is better)
Translates to: LDGSPQVSVIIRLDS*WLTPKSSMGARGAV
Trigger: AACAGCCCCACGCGCACCCATGGAACTTTTGGGCGTGAGCCAGCAGCTGTCAAGCCTGATGATGACCGATACCTGCGGGCTGCCATCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 90 bp CAAGCCCGGGAGCCTGCCCCAGTGGGCAGGCCCAGATTCCCTGTTTaGCTCAGCCTCCGAGTCGGAAACCCCATAGTTGGTAAAGAGACT +
Preference number: 1 (lower is better)
Translates to: QAREPAPVGRPRFPV*LSLRVGNPIVGKET
Trigger: AGTCTCTTTACCAACTATGGGGTTTCCGACTCGGAGGCTGAGCCAAACAGGGAATCTGGGCCTGCCCACTGGGGCAGGCTCCCGGGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CCA 90 bp GCAACCAGCTCCCGATTCATGGGGGACTTCACCATTACAGATCCCTaGGCCGCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTACTCTCGC +
Preference number: 1 (lower is better)
Translates to: ATSSRFMGDFTITDP*AASSSSSSSSSYSR
Trigger: GCGAGAGTAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGCGGCCCAGGGATCTGTAATGGTGAAGTCCCCCATGAATCGGGAGCTGGTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 90 bp GTGGCCACCCCTGCAGTGTACTCAGCCTTGGTGAAGCGTGGTGGCTaGTCGTTGATGTCCTCTAGCACAACGCGCACCTCCTGCAGTGTG +
Preference number: 1 (lower is better)
Translates to: VATPAVYSALVKRGG*SLMSSSTTRTSCSV
Trigger: CACACTGCAGGAGGTGCGCGTTGTGCTAGAGGACATCAACGACCAGCCACCACGCTTCACCAAGGCTGAGTACACTGCAGGGGTGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 90 bp ACTGGTGGCTTGTGGCGGAAGCGCAGGCTACCCTGCCCTGGGCTGTaGTCTCCTGGCTCCTCGTCCAGCTCAGTCTGTATCAGCTTGATT +
Preference number: 1 (lower is better)
Translates to: TGGLWRKRRLPCPGL*SPGSSSSSVCISLI
Trigger: AATCAAGCTGATACAGACTGAGCTGGACGAGGAGCCAGGAGACCACAGCCCAGGGCAGGGTAGCCTGCGCTTCCGCCACAAGCCACCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647092.1
3UTR TCA 90 bp CATACTCCTGGATGGCAGCCCGCAGGTATCGGTCATCATCAGGCTTaGCAGCTGCTGGCTCACGCCCAAAAGTTCCATGGGTGCGCGTGG +
Preference number: 1 (lower is better)
Translates to: HTPGWQPAGIGHHQA*QLLAHAQKFHGCAW
Trigger: CCACGCGCACCCATGGAACTTTTGGGCGTGAGCCAGCAGCTGTCAAGCCTGATGATGACCGATACCTGCGGGCTGCCATCCAGGAGTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 90 bp GGATTGAAGATGATCGAGGAGGCTCCCTTCAGAGGCCAGGGCGGGTaGTGTGACAGAGTGGCAAGAGGCAGGGCATTTCCAGCAGCTGGA +
Preference number: 1 (lower is better)
Translates to: GLKMIEEAPFRGQGG*CDRVARGRAFPAAG
Trigger: TCCAGCTGCTGGAAATGCCCTGCCTCTTGCCACTCTGTCACAGCACCCGCCCTGGCCTCTGAAGGGAGCCTCCTCGATCATCTTCAATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR GCA 90 bp GGTCTACCTGTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTaGAGGAAGACAGTGGCCCAAGCAGTCTGGGACACACACTCACCC +
Preference number: 1 (lower is better)
Translates to: GLPVDPPASETGAAG*RKTVAQAVWDTHSP
Trigger: GGGTGAGTGTGTGTCCCAGACTGCTTGGGCCACTGTCTTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR GCA 90 bp CATCCCCCTAGGTCTACCTGTAGATCCTCCTGCTTCAGAGACCGGTaGTGCAGGCTGCAGGAAGACAGTGGCCCAAGCAGTCTGGGACAC +
Preference number: 1 (lower is better)
Translates to: HPPRSTCRSSCFRDR*CRLQEDSGPSSLGH
Trigger: GTGTCCCAGACTGCTTGGGCCACTGTCTTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGACCTAGGGGGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR CCA 90 bp TCGGACCTCAGTTTCCCACCTGTCGTGGGAGCAAGTTGGACTGCATaGGGAAGCAGTCACAGGAATCCCCACGGGGCCAGGCAGGTGAAA +
Preference number: 1 (lower is better)
Translates to: SDLSFPPVVGASWTA*GSSHRNPHGARQVK
Trigger: TTTCACCTGCCTGGCCCCGTGGGGATTCCTGTGACTGCTTCCCCATGCAGTCCAACTTGCTCCCACGACAGGTGGGAAACTGAGGTCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CCA 90 bp AAGACAAGGCTGTTGTTGCCAATGTCTGCATCCAGGGCCAGCACCTaGATCAACTCTGAGCCCACCTTGGCGTCGGTGGCCACCCCTGCA +
Preference number: 1 (lower is better)
Translates to: KTRLLLPMSASRAST*INSEPTLASVATPA
Trigger: TGCAGGGGTGGCCACCGACGCCAAGGTGGGCTCAGAGTTGATCCAGGTGCTGGCCCTGGATGCAGACATTGGCAACAACAGCCTTGTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 90 bp ACAAACATGCCCCCACATCCCCCTAGGTCTACCTGTAGATCCTCCTaGTTCAGAGACCGGTGCTGCAGGCTGCAGGAAGACAGTGGCCCA +
Preference number: 1 (lower is better)
Translates to: TNMPPHPPRSTCRSS*FRDRCCRLQEDSGP
Trigger: TGGGCCACTGTCTTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGACCTAGGGGGATGTGGGGGCATGTTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR CCA 90 bp ACCGAGGTGCCCGCCGGCTCATTCTCATACACGCTTGTGCTGAACTaGGGCTTGGAGAACTGTGGCCGGCAGTCATTGACATCCAGCACT +
Preference number: 1 (lower is better)
Translates to: TEVPAGSFSYTLVLN*GLENCGRQSLTSST
Trigger: AGTGCTGGATGTCAATGACTGCCGGCCACAGTTCTCCAAGCCCCAGTTCAGCACAAGCGTGTATGAGAATGAGCCGGCGGGCACCTCGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 90 bp ACCCGGTCCACGTCCAGGATGCGGTTGGTATCGCGGTTCACCACGTaGATAAGCAGTTCTGTCTGCGCAAAGTTCACCCGGCCCTTCTTG +
Preference number: 1 (lower is better)
Translates to: TRSTSRMRLVSRFTT*ISSSVCAKFTRPFL
Trigger: CAAGAAGGGCCGGGTGAACTTTGCGCAGACAGAACTGCTTATCCACGTGGTGAACCGCGATACCAACCGCATCCTGGACGTGGACCGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 90 bp TCGCCATCTGCAGGGCAGACATGTCATCCGGCAGCCGGACAGAGATaGCAGGCTGCACGTCCAGGACGTTGTAGTTCCGGAAAAGATTCC +
Preference number: 1 (lower is better)
Translates to: SPSAGQTCHPAAGQR*QAARPGRCSSGKDS
Trigger: GGAATCTTTTCCGGAACTACAACGTCCTGGACGTGCAGCCTGCCATCTCTGTCCGGCTGCCGGATGACATGTCTGCCCTGCAGATGGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 90 bp ACCACCTTCAGCAGCGAGCCCTTGATTGGCCCCTCACGAATGATCTaGCCCAGCTTGGCAATGTTGTCATACTCCTGGATGGCAGCCCGC +
Preference number: 1 (lower is better)
Translates to: TTFSSEPLIGPSRMI*PSLAMLSYSWMAAR
Trigger: GCGGGCTGCCATCCAGGAGTATGACAACATTGCCAAGCTGGGCCAGATCATTCGTGAGGGGCCAATCAAGGGCTCGCTGCTGAAGGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR TCA 90 bp GGCAGGAGGAGGCTTTTTGCACCATCCGCTGTGCAAAGAGCTTTTTaGGCCGCAGGTAATCCTCCAGGACCACCTTCAGCAGCGAGCCCT +
Preference number: 1 (lower is better)
Translates to: GRRRLFAPSAVQRAF*AAGNPPGPPSAASP
Trigger: AGGGCTCGCTGCTGAAGGTGGTCCTGGAGGATTACCTGCGGCTCAAAAAGCTCTTTGCACAGCGGATGGTGCAAAAAGCCTCCTCCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR GCA 90 bp AACTGTGGCTTATGCTTCACACACACCCACTCTGTGAAGCCCTCCTaGCTGGAGCCGCCCCTACTGTCTCCTACCTCTCTTGGGGAGGAA +
Preference number: 1 (lower is better)
Translates to: NCGLCFTHTHSVKPS*LEPPLLSPTSLGEE
Trigger: TTCCTCCCCAAGAGAGGTAGGAGACAGTAGGGGCGGCTCCAGGCAGGAGGGCTTCACAGAGTGGGTGTGTGTGAAGCATAAGCCACAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CCA 90 bp ATCTGTGGCCACCACGGTCAGACTGAACTTCTCGTAGGACTGCAGTaGCCGCTGTGTGGTCACCAAGCCCGAGTCCATGTCCACATGGAA +
Preference number: 1 (lower is better)
Translates to: ICGHHGQTELLVGLQ*PLCGHQARVHVHME
Trigger: TTCCATGTGGACATGGACTCGGGCTTGGTGACCACACAGCGGCCACTGCAGTCCTACGAGAAGTTCAGTCTGACCGTGGTGGCCACAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR TCA 90 bp CAGGGCTCCTCCCTAGGAATCATGGGGCCTTACCTCCCTCTAGAATaGACCTTGGTAGATGCTCCCCGTCCCTGCAACCAACAGGTTCAG +
Preference number: 1 (lower is better)
Translates to: QGSSLGIMGPYLPLE*TLVDAPRPCNQQVQ
Trigger: CTGAACCTGTTGGTTGCAGGGACGGGGAGCATCTACCAAGGTTCATTCTAGAGGGAGGTAAGGCCCCATGATTCCTAGGGAGGAGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
3UTR TCA 90 bp TGTCCAGCCCCTCACTTTGACTCCCCAGTTCTGTGCACAGAAGTATaGGGCTTCTGTGTACAGAGTGAAGCGTGGCCCAGCCTGGGTGTG +
Preference number: 1 (lower is better)
Translates to: CPAPHFDSPVLCTEV*GFCVQSEAWPSLGV
Trigger: CACACCCAGGCTGGGCCACGCTTCACTCTGTACACAGAAGCCTCATACTTCTGTGCACAGAACTGGGGAGTCAAAGTGAGGGGCTGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR TCA 90 bp CAGCCTCCTGGTAGGAGGGCTGGTCAAAGATGGGGTTGTTGTCATTaGTGTCCACGATTTCCAGGTAGACAGGGATCTCAGCTGCCCGGG +
Preference number: 1 (lower is better)
Translates to: QPPGRRAGQRWGCCH*CPRFPGRQGSQLPG
Trigger: CCCGGGCAGCTGAGATCCCTGTCTACCTGGAAATCGTGGACATCAATGACAACAACCCCATCTTTGACCAGCCCTCCTACCAGGAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 90 bp CCAAGTCCTGCCCACACTAGGGATGCTATCTGTGGTTTTGGTGAGTaGTTTGCTGATGACCCGTCAAAGCAGTCCCACCCCAGGATGGGC +
Preference number: 1 (lower is better)
Translates to: PSPAHTRDAICGFGE*FADDPSKQSHPRMG
Trigger: GCCCATCCTGGGGTGGGACTGCTTTGACGGGTCATCAGCAAAGCACTCACCAAAACCACAGATAGCATCCCTAGTGTGGGCAGGACTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CCA 90 bp GTGAGTGCTTTGCTGATGACCCGTCAAAGCAGTCCCACCCCAGGATaGGCTTCTCAGAATCCCAAACCCTTGACCTCTCCTCACAACGCG +
Preference number: 1 (lower is better)
Translates to: VSALLMTRQSSPTPG*ASQNPKPLTSPHNA
Trigger: CGCGTTGTGAGGAGAGGTCAAGGGTTTGGGATTCTGAGAAGCCCATCCTGGGGTGGGACTGCTTTGACGGGTCATCAGCAAAGCACTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CCA 90 bp ACATTGTCAGTATTGACAATGGCCCCAGTGATGTTGGAGAGCAGGTaGATGAACTCCTCCTCGAAGCCGCGCACACGGTCGGGGATCTCG +
Preference number: 1 (lower is better)
Translates to: TLSVLTMAPVMLESR*MNSSSKPRTRSGIS
Trigger: CGAGATCCCCGACCGTGTGCGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAACATCACTGGGGCCATTGTCAATACTGACAATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR TCA 90 bp CAGAGCGCTCTGGTAGGTCGCTGGCATTGTCAATCACTGAGAGAGTaGCCTCATAGGTGGCAACCAGCTCCCGATTCATGGGGGACTTCA +
Preference number: 1 (lower is better)
Translates to: QSALVGRWHCQSLRE*PHRWQPAPDSWGTS
Trigger: TGAAGTCCCCCATGAATCGGGAGCTGGTTGCCACCTATGAGGTCACTCTCTCAGTGATTGACAATGCCAGCGACCTACCAGAGCGCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 90 bp CTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCATCTaGGCCTTTGGCCTGAGGCTCCACAGGGTACAACCTGGGGCTCGT +
Preference number: 1 (lower is better)
Translates to: LDERLLVKRCALVVI*AFGLRLHRVQPGAR
Trigger: ACGAGCCCCAGGTTGTACCCTGTGGAGCCTCAGGCCAAAGGCCCAGATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR CCA 90 bp CCCTCACGAATGATCTGGCCCAGCTTGGCAATGTTGTCATACTCCTaGATGGCAGCCCGCAGGTATCGGTCATCATCAGGCTTGACAGCT +
Preference number: 1 (lower is better)
Translates to: PSRMIWPSLAMLSYS*MAARRYRSSSGLTA
Trigger: AGCTGTCAAGCCTGATGATGACCGATACCTGCGGGCTGCCATCCAGGAGTATGACAACATTGCCAAGCTGGGCCAGATCATTCGTGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 90 bp TCCAGCTCAGTCTGTATCAGCTTGATTGGCCCCTCACGAATGATCTaGCCCAGCTTGGCAATGTTGTCATACTCCTGGATGGCAGCCCGC +
Preference number: 1 (lower is better)
Translates to: SSSVCISLIGPSRMI*PSLAMLSYSWMAAR
Trigger: GCGGGCTGCCATCCAGGAGTATGACAACATTGCCAAGCTGGGCCAGATCATTCGTGAGGGGCCAATCAAGCTGATACAGACTGAGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647092.1
3UTR TCA 90 bp AAAGCAGTCCCACCCCAGGATGGGCTTCTCAGAATCCCAAACCCTTaGCCTCTCCTCACAACGCGAGGGTTAAACACTTTGGTCAGGTCC +
Preference number: 1 (lower is better)
Translates to: KAVPPQDGLLRIPNP*PLLTTRGLNTLVRS
Trigger: GGACCTGACCAAAGTGTTTAACCCTCGCGTTGTGAGGAGAGGTCAAGGGTTTGGGATTCTGAGAAGCCCATCCTGGGGTGGGACTGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR GCA 90 bp ACTCCAGGAAAACTGAAAGACCTGTCACCCACTAACTGTGGCTTATaGTTCACACACACCCACTCTGTGAAGCCCTCCTGCCTGGAGCCG +
Preference number: 1 (lower is better)
Translates to: TPGKLKDLSPTNCGL*FTHTHSVKPSCLEP
Trigger: CGGCTCCAGGCAGGAGGGCTTCACAGAGTGGGTGTGTGTGAAGCATAAGCCACAGTTAGTGGGTGACAGGTCTTTCAGTTTTCCTGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR GCA 90 bp CTTCAGAGTCGTTGGCAAGGGCCCGGAAGTAGTGGATGGCCAGAATaGTGTAGAAGACAAGGCTGTTGTTGCCAATGTCTGCATCCAGGG +
Preference number: 1 (lower is better)
Translates to: LQSRWQGPGSSGWPE*CRRQGCCCQCLHPG
Trigger: CCCTGGATGCAGACATTGGCAACAACAGCCTTGTCTTCTACAGCATTCTGGCCATCCACTACTTCCGGGCCCTTGCCAACGACTCTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 90 bp ATGCGGTTGGTATCGCGGTTCACCACGTGGATAAGCAGTTCTGTCTaGGCAAAGTTCACCCGGCCCTTCTTGTCCACATGGAACTGCACA +
Preference number: 1 (lower is better)
Translates to: MRLVSRFTTWISSSV*AKFTRPFLSTWNCT
Trigger: TGTGCAGTTCCATGTGGACAAGAAGGGCCGGGTGAACTTTGCGCAGACAGAACTGCTTATCCACGTGGTGAACCGCGATACCAACCGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 90 bp AGAGATGGAGGAGTGGCAGGAGGAGGCTTTTTGCACCATCCGCTGTaGAAAGAGCTTTTTGAGCCGCAGGTAATCCTCCAGGACCACCTT +
Preference number: 1 (lower is better)
Translates to: RDGGVAGGGFLHHPL*KELFEPQVILQDHL
Trigger: AAGGTGGTCCTGGAGGATTACCTGCGGCTCAAAAAGCTCTTTGCACAGCGGATGGTGCAAAAAGCCTCCTCCTGCCACTCCTCCATCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR CCA 90 bp CTGAATTTTCGCGACGGTTGCTGGCTACATCCCCAGGGTTGTCTTTaGCCAAGGCAGTCAGGATATAGTGGTCCTTCTTCTCCCGGTCCA +
Preference number: 1 (lower is better)
Translates to: LNFRDGCWLHPQGCL*PRQSGYSGPSSPGP
Trigger: TGGACCGGGAGAAGAAGGACCACTATATCCTGACTGCCTTGGCCAAAGACAACCCTGGGGATGTAGCCAGCAACCGTCGCGAAAATTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 90 bp CCAGCACTTGGATCACCACCTGCACTGAATTTTCGCGACGGTTGCTaGCTACATCCCCAGGGTTGTCTTTGGCCAAGGCAGTCAGGATAT +
Preference number: 1 (lower is better)
Translates to: PALGSPPALNFRDGC*LHPQGCLWPRQSGY
Trigger: ATATCCTGACTGCCTTGGCCAAAGACAACCCTGGGGATGTAGCCAGCAACCGTCGCGAAAATTCAGTGCAGGTGGTGATCCAAGTGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 90 bp GGCCCACATCTTCAGAGTCGTTGGCAAGGGCCCGGAAGTAGTGGATaGCCAGAATGCTGTAGAAGACAAGGCTGTTGTTGCCAATGTCTG +
Preference number: 1 (lower is better)
Translates to: GPHLQSRWQGPGSSG*PECCRRQGCCCQCL
Trigger: CAGACATTGGCAACAACAGCCTTGTCTTCTACAGCATTCTGGCCATCCACTACTTCCGGGCCCTTGCCAACGACTCTGAAGATGTGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 90 bp GAGAATGCTTGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATaGCACCTCCACCTGGACGTCCAGCAGAGAGGGATGTGGCGGAAA +
Preference number: 1 (lower is better)
Translates to: ENACSLTLTFLSTWG*HLHLDVQQRGMWRK
Trigger: TTTCCGCCACATCCCTCTCTGCTGGACGTCCAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACAAGCATTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR CCA 90 bp TCGCTCGCCACAGAAGCCTTGCCCTCCAGGTGCCAAAGCCCAGCATaGAGAAGTTGCCAAATGGCAAAGGTTCCCTTTAGTCAAGTGAAA +
Preference number: 1 (lower is better)
Translates to: SLATEALPSRCQSPA*RSCQMAKVPFSQVK
Trigger: TTTCACTTGACTAAAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCACCTGGAGGGCAAGGCTTCTGTGGCGAGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR TCA 90 bp CAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTTAGTCAAGTaGAATGCTCAGCCTACACCGGGGCCAAGACACTGTCCTGGCATC +
Preference number: 1 (lower is better)
Translates to: QHGEVAKWQRFPLVK*NAQPTPGPRHCPGI
Trigger: GATGCCAGGACAGTGTCTTGGCCCCGGTGTAGGCTGAGCATTTCACTTGACTAAAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR GCA 90 bp TTAACCTGTGATGTGGCCATGATGCTGTCCAGTTTAACAGTGCCTTaGCCCCATCCACATTCCCTAGGTAAGTCTTCCCTATACCCGCTG +
Preference number: 1 (lower is better)
Translates to: LTCDVAMMLSSLTVP*PHPHSLGKSSLYPL
Trigger: CAGCGGGTATAGGGAAGACTTACCTAGGGAATGTGGATGGGGGCAAGGCACTGTTAAACTGGACAGCATCATGGCCACATCACAGGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR TCA 90 bp GTTTTCCATCGACAAGGACCGTCTGCTGCACTGCGTCTAATGGGATaGTCTTCAGTGGGAAAGGAAATGCCCTGTCAGGTGTATGATGTC +
Preference number: 1 (lower is better)
Translates to: VFHRQGPSAALRLMG*SSVGKEMPCQVYDV
Trigger: GACATCATACACCTGACAGGGCATTTCCTTTCCCACTGAAGATCATCCCATTAGACGCAGTGCAGCAGACGGTCCTTGTCGATGGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR GCA 90 bp ATTGAGCCAAAAGCTCAGCCTGGTTTTCCATCGACAAGGACCGTCTaGTGCACTGCGTCTAATGGGATGATCTTCAGTGGGAAAGGAAAT +
Preference number: 1 (lower is better)
Translates to: IEPKAQPGFPSTRTV*CTASNGMIFSGKGN
Trigger: ATTTCCTTTCCCACTGAAGATCATCCCATTAGACGCAGTGCAGCAGACGGTCCTTGTCGATGGAAAACCAGGCTGAGCTTTTGGCTCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR TCA 90 bp GAAGCCCACTGTCCCTTCCTTCCAAGTCAATCTGATCTCAAAAAGTaGGTCCGGCTTCACAAGAAACTTACCAAGAGGACCTTGGAGAAG +
Preference number: 1 (lower is better)
Translates to: EAHCPFLPSQSDLKK*VRLHKKLTKRTLEK
Trigger: CTTCTCCAAGGTCCTCTTGGTAAGTTTCTTGTGAAGCCGGACTCACTTTTTGAGATCAGATTGACTTGGAAGGAAGGGACAGTGGGCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR TCA 90 bp CTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATaGCAAAGAGGAGAGTGCTGTGCACACAGAAGGAGCTCAACCAAT +
Preference number: 1 (lower is better)
Translates to: LQVPNTTLGHLKDIL*QRGECCAHRRSSTN
Trigger: ATTGGTTGAGCTCCTTCTGTGTGCACAGCACTCTCCTCTTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
3UTR TCA 90 bp AGGCTCTATTGGAGAAGCCCACTGTCCCTTCCTTCCAAGTCAATCTaGTCTCAAAAAGTGAGTCCGGCTTCACAAGAAACTTACCAAGAG +
Preference number: 1 (lower is better)
Translates to: RLYWRSPLSLPSKSI*SQKVSPASQETYQE
Trigger: CTCTTGGTAAGTTTCTTGTGAAGCCGGACTCACTTTTTGAGATCAGATTGACTTGGAAGGAAGGGACAGTGGGCTTCTCCAATAGAGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR GCA 90 bp GACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGGGAGCCCCCCAGCATCTGCCTGGTaGCCTGTGGGAGCAGCTGCC +
Preference number: 2 (lower is better)
Translates to: DPSRRRAHECMPHHPGSPPASAW*PVGAAA
Trigger: GGCAGCTGCTCCCACAGGGCACCAGGCAGATGCTGG...GGGGCTCCCAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTC
72% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CAA 90 bp GCCCTTTCCTGCCCGCCTCCTGGTCCCGATGCAGGGAGGGGAGCATaGCCAGCCTCCCACGCTTCTGTCCCTCCCAAGCCCGGGAGCCTG +
Preference number: 2 (lower is better)
Translates to: ALSCPPPGPDAGRGA*PASHASVPPKPGSL
Trigger: CAGGCTCCCGGGCTTGGGAGGGACAGAAGCGTGGGAGGCTGGCAATGCTCCCCTCCCTGCATCGGGACCAGGAGGCGGGCAGGAAAGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR GCA 90 bp GACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGGGAGCCCCGCCTTGCCCTCCAGGTaGCAAAGCCCAGCATGGAGA +
Preference number: 2 (lower is better)
Translates to: DPSRRRAHECMPHHPGSPALPSR*QSPAWR
Trigger: TCTCCATGCTGGGCTTTGGCACCTGGAGGGCAAGGC...GGGGCTCCCAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR-3UTR GCA 90 bp AAGGCAGTGGCCTCGGCAGCGGTCAGCGTCTCCAGCGAGCGGCCCAGGCCCTTCGGTAGGTCATCCTCATaGTCCGCCTGGGCGGCCAGC +
Preference number: 2 (lower is better)
Translates to: KAVASAAVSVSSERPRPFGRSSS*SAWAAS
Trigger: GCTGGCCGCCCAGGCGGAGCATGAGGATGACCTACC...GAAGGGCCTGGGCCGCTCGCTGGAGACGCTGACCGCTGCCGAGGCCACTGCCTT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTTGGGATCTGAGCAGCTaGTGCGGGCTGCCAGGGCCA +
Preference number: 2 (lower is better)
Translates to: WTGVGCPASRGCPRWASLWDLSS*CGLPGP
Trigger: TGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCCCA...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR GCA 90 bp CGTTGTGGCCTGCCAGGTCTCGGGCCACAATGTCCACCACGAAGTAGCCGGGGCGACCGGCCCTGTCCCTaGCCTTGCTCCCTGGGAGGG +
Preference number: 2 (lower is better)
Translates to: RCGLPGLGPQCPPRSSRGDRPCP*PCSLGG
Trigger: CCCTCCCAGGGAGCAAGGGCAGGGACAGGGCCGGTC...GCCCCGGCTACTTCGTGGTGGACATTGTGGCCCGAGACCTGGCAGGCCACAACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CAA 90 bp AGCGTGCCCGTGCTGCCGTGCACCACATGGATCCCATCGGGCCCCTaGAGCTCCACTGGTGGCTTGTGGCGGAAGCGCAGGCTACCCTGC +
Preference number: 2 (lower is better)
Translates to: SVPVLPCTTWIPSGP*SSTGGLWRKRRLPC
Trigger: GCAGGGTAGCCTGCGCTTCCGCCACAAGCCACCAGTGGAGCTCAAGGGGCCCGATGGGATCCATGTGGTGCACGGCAGCACGGGCACGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp AGTGGCCTCGGCAGCGGTCAGCGTCTCCAGCGAGCGGCCCAGGCCCTTCTGGTCCTGTCCGGTTGGCAATaGCCTTCCCTGCCGAGGAGT +
Preference number: 2 (lower is better)
Translates to: SGLGSGQRLQRAAQALLVLSGWQ*PSLPRS
Trigger: ACTCCTCGGCAGGGAAGGTCATTGCCAACCGGACAG...GACCAGAAGGGCCTGGGCCGCTCGCTGGAGACGCTGACCGCTGCCGAGGCCACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTCCTGCCCTTGCTCCCTaGGAGGGGACGGTGGATGGG +
Preference number: 2 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLPALAP*EGTVDG
Trigger: CCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGG...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTAGGGGATGTCCGCGCTaGGCCTCCCTTGCGCCTGCT +
Preference number: 2 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLRGCPR*ASLAPA
Trigger: AGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCT...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR CCA 90 bp GAGGGTGGGGAGCTGGAGGTCAGTGCCCTGTCTACAGGGGGCAGCGGCTGCTCACAGCCTCCCCGAGGGTaGGATGGTCTGGACCTCTCC +
Preference number: 2 (lower is better)
Translates to: EGGELEVSALSTGGSGCSQPPRG*DGLDLS
Trigger: GGAGAGGTCCAGACCATCCCACCCTCGGGGAGGCTG...TGAGCAGCCGCTGCCCCCTGTAGACAGGGCACTGACCTCCAGCTCCCCACCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR TCA 90 bp CCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGGGCAAAAGTGGGATCTaGGCAGCTGATGCGGGCTGC +
Preference number: 2 (lower is better)
Translates to: PPLRLLSRRGWCLRGGAGGKSGI*AADAGC
Trigger: GCAGCCCGCATCAGCTGCTCAGATCCCACTTTTGCC...CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR TCA 90 bp GACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGGGAGCCCCAGAATCCCAAACCCTTaGCCTCTCCTCACAACGCGA +
Preference number: 2 (lower is better)
Translates to: DPSRRRAHECMPHHPGSPRIPNP*PLLTTR
Trigger: TCGCGTTGTGAGGAGAGGTCAAGGGTTTGGGATTCT...GGGGCTCCCAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR TCA 90 bp GAGGGTGGGGAGCTGGAGGTCAGTGCCCTGTCTACAGGGGGCAGCGGCTGCTCATCCAGCAGCTGGAGGTaGTGCCACCTGGACTCGGAG +
Preference number: 2 (lower is better)
Translates to: EGGELEVSALSTGGSGCSSSSWR*CHLDSE
Trigger: CTCCGAGTCCAGGTGGCATCACCTCCAGCTGCTGGA...TGAGCAGCCGCTGCCCCCTGTAGACAGGGCACTGACCTCCAGCTCCCCACCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR TCA 90 bp AAGGCAGTGGCCTCGGCAGCGGTCAGCGTCTCCAGCGAGCGGCCCAGGCCCTTCGGATGTAGATGCCGATaGTGGCCGTGTCGTTGTGGC +
Preference number: 2 (lower is better)
Translates to: KAVASAAVSVSSERPRPFGCRCR*WPCRCG
Trigger: GCCACAACGACACGGCCATCATCGGCATCTACATCC...GAAGGGCCTGGGCCGCTCGCTGGAGACGCTGACCGCTGCCGAGGCCACTGCCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp GGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTCCGGCCAGCGCGCTGGGCCTCCCTTaGGCCTGCTTAGCCGGAGGG +
Preference number: 2 (lower is better)
Translates to: GMWRKCSETWTGVGCPASALGLP*ACLAGG
Trigger: CCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGC...GCTGGCCGGACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR GCA 90 bp CTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCCAGGGAGGGGAGCATTaGCAGCCTCCCACGCTTCTG +
Preference number: 2 (lower is better)
Translates to: LSAPVTPGTLAEATDPLPQGGEH*QPPTLL
Trigger: CAGAAGCGTGGGAGGCTGGCAATGCTCCCCTCCCTG...GGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR CCA 90 bp TTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGGGAGGGAGGGGACGGTGGATaGGTGCTGCTCACACCCACA +
Preference number: 2 (lower is better)
Translates to: LRLLSRRGWCLRGGAGREGGDGG*VLLTPT
Trigger: TGTGGGTGTGAGCAGCACCCATCCACCGTCCCCTCC...CTCCCTCCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR CCA 90 bp GACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGGGAGCCCCTTTCTCCCTGAGAAATaGGAGAACTCAGGGCTGCCC +
Preference number: 2 (lower is better)
Translates to: DPSRRRAHECMPHHPGSPFLPEK*ENSGLP
Trigger: GGGCAGCCCTGAGTTCTCCCATTTCTCAGGGAGAAA...GGGGCTCCCAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CAA 90 bp ACGATCGCGTTGGGGCCCTCATCTGCATCCACTGCGCCTGTCACGTaGCCCACGAGGGTGCCGCGTGGTGAGTGCTCAGGCACTGTCAGC +
Preference number: 2 (lower is better)
Translates to: TIALGPSSASTAPVT*PTRVPRGECSGTVS
Trigger: GCTGACAGTGCCTGAGCACTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCAGATGAGGGCCCCAACGCGATCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CAA 90 bp TGCACCACATGGATCCCATCGGGCCCCTTGAGCTCCACTGGTGGCTaGTGGCGGAAGCGCAGGCTACCCTGCCCTGGGCTGTGGTCTCCT +
Preference number: 2 (lower is better)
Translates to: CTTWIPSGPLSSTGG*WRKRRLPCPGLWSP
Trigger: AGGAGACCACAGCCCAGGGCAGGGTAGCCTGCGCTTCCGCCACAAGCCACCAGTGGAGCTCAAGGGGCCCGATGGGATCCATGTGGTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp TCATCTGCATCCACTGCGCCTGTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGTGGGATCTGAGCAGCTaGTGCGGGCTGCCAGGGCCA +
Preference number: 2 (lower is better)
Translates to: SSASTAPVTLPTRVPRGEWDLSS*CGLPGP
Trigger: TGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCCCA...CTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCAGATGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp CAAAGGCTGGGCCACGGCCTTGGCCCAGGCCCCACAGGACAGGAAGGGTGGTGGTGGGCCTGCCAGCCATaGGGAAGAGAGAAGAGGGTT +
Preference number: 2 (lower is better)
Translates to: QRLGHGLGPGPTGQEGWWWACQP*GREKRV
Trigger: AACCCTCTTCTCTCTTCCTCATGGCTGGCAGGCCCA...CCACCACCCTTCCTGTCCTGTGGGGCCTGGGCCAAGGCCGTGGCCCAGCCTTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp GCGCCTGTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGTGCTCAGGCACTGTCGCGGGATCTCCTCTCTaGTGTGGAGGATGGTGCCGT +
Preference number: 2 (lower is better)
Translates to: APVTLPTRVPRGECSGTVAGSPL*CGGWCR
Trigger: ACGGCACCATCCTCCACATCAGAGAGGAGATCCCGC...GACAGTGCCTGAGCACTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTACGGTGGATGGGTGCTaGTCACACCCACAAGGCTTC +
Preference number: 2 (lower is better)
Translates to: WTGVGCPASRGCPRWASLTVDGC*SHPQGF
Trigger: GAAGCCTTGTGGGTGTGAGCAGCACCCATCCACCGT...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR GCA 90 bp TTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCGACCGGCCCTGTCCCTaGCCTTGCTCCCTGGGAGGG +
Preference number: 2 (lower is better)
Translates to: FGLFQLSLSQAGPQTLGPDRPCP*PCSLGG
Trigger: CCCTCCCAGGGAGCAAGGGCAGGGACAGGGCCGGTC...GGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp GGGCCCAGCCAGTGCTCTCCAGGTGGCCCTGCTCATCTGTACCCTCTGGTCATGAGGGAGGACCTGGGCTaGCCAGCTCCTGTCCCAGTC +
Preference number: 2 (lower is better)
Translates to: GPSQCSPGGPAHLYPLVMREDLG*PAPVPV
Trigger: GACTGGGACAGGAGCTGGGCAGCCCAGGTCCTCCCT...CATGACCAGAGGGTACAGATGAGCAGGGCCACCTGGAGAGCACTGGCTGGGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR GCA 90 bp CAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCATGCACCGGTGCTGCAGGCTaGAGGAAGACAGTGGCCCAA +
Preference number: 2 (lower is better)
Translates to: QLPSLPGPLQRQLTPSPCTGAAG*RKTVAQ
Trigger: TTGGGCCACTGTCTTCCTGCAGCCTGCAGCACCGGT...GCATGGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR-3UTR GCA 90 bp CGTTGGGGCCCTCATCTGCATCCACTGCGCCTGTCACGTTGCCCACGAGGGTGCCGGCTGCATTCAGTCTaGAAAGGCTGGGCCACGGCC +
Preference number: 2 (lower is better)
Translates to: RWGPHLHPLRLSRCPRGCRLHSV*KGWATA
Trigger: GGCCGTGGCCCAGCCTTTGCAGACTGAATGCAGCCG...GCACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCAGATGAGGGCCCCAACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp GCGCCTGTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGTGCTCAGGCACTGTCGGCAATGACCTTCCCTaGCGAGGAGTCCTCCAGCTG +
Preference number: 2 (lower is better)
Translates to: APVTLPTRVPRGECSGTVGNDLP*RGVLQL
Trigger: CAGCTGGAGGACTCCTCGGCAGGGAAGGTCATTGCC...GACAGTGCCTGAGCACTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGTGCCGCGTGGTGAGTaGTCAGGCACTGTCAGCAGC +
Preference number: 2 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLVPRGE*SGTVSS
Trigger: GCTGCTGACAGTGCCTGAGCACTCACCACGCGGCAC...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp CCTCCTCCTCCTCCTCCTCCTCCTCTTCCTACTCTCGCTCCCTGTCCCCCAGGCGGAGGGGACGGTGGATaGGTGCTGCTCACACCCACA +
Preference number: 2 (lower is better)
Translates to: PPPPPPPPLPTLAPCPPGGGDGG*VLLTPT
Trigger: TGTGGGTGTGAGCAGCACCCATCCACCGTCCCCTCC...GCCTGGGGGACAGGGAGCGAGAGTAGGAAGAGGAGGAGGAGGAGGAGGAGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp GGATCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGGAGGGGACGGTaGATGGGTGCTGCTCACACC +
Preference number: 2 (lower is better)
Translates to: GSEQLMRAARAKPRLSPRPGRGR*MGAAHT
Trigger: GGTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGG...CCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp CAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCATGCCCAAGGAGTGAGCTCTaGCTTGCCACTCCCCAGCTC +
Preference number: 2 (lower is better)
Translates to: QLPSLPGPLQRQLTPSPCPRSEL*LATPQL
Trigger: GAGCTGGGGAGTGGCAAGCCAGAGCTCACTCCTTGG...GCATGGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR CCA 90 bp ATTTGGCGGATTCTGTGCGGGCGTTGCGCTCGAAGGCAGTGGCCTCGGCAGCGGTCAGTCTGCAAAGGCTaGGCCACGGCCTTGGCCCAG +
Preference number: 2 (lower is better)
Translates to: IWRILCGRCARRQWPRQRSVCKG*ATALAQ
Trigger: CTGGGCCAAGGCCGTGGCCCAGCCTTTGCAGACTGA...CCGCTGCCGAGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGCAGTGGCCGCTGTGTaGTCACCAAGCCCGAGTCCA +
Preference number: 2 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPAVAAV*SPSPSP
Trigger: TGGACTCGGGCTTGGTGACCACACAGCGGCCACTGC...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp GTTGTGGCCTGCCAGGTCTCGGGCCACAATGTCCACCACGAAGTAGCCGGGGCTTCGTATGGCACTGGCTaGCCCAGGTCGCTGGCCACC +
Preference number: 2 (lower is better)
Translates to: VVACQVSGHNVHHEVAGASYGTG*PRSLAT
Trigger: GGTGGCCAGCGACCTGGGCCAGCCAGTGCCATACGA...AGCCCCGGCTACTTCGTGGTGGACATTGTGGCCCGAGACCTGGCAGGCCACAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTCCCCTTGAGCTCCACTaGTGGCTTGTGGCGGAAGCG +
Preference number: 2 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPPLELH*WLVAEA
Trigger: CGCTTCCGCCACAAGCCACCAGTGGAGCTCAAGGGG...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CAA 90 bp GTGCCAGCTGGGAGGAGGAGCAAACAGGGCTCTCCAAGCATGGTCTaGGCAGCCGTCTTGGTGGCCCCTCTTCAGGGCACCCACGTTGGG +
Preference number: 2 (lower is better)
Translates to: VPAGRRSKQGSPSMV*AAVLVAPLQGTHVG
Trigger: CCCAACGTGGGTGCCCTGAAGAGGGGCCACCAAGACGGCTGCCAAGACCATGCTTGGAGAGCCCTGTTTGCTCCTCCTCCCAGCTGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CAA 90 bp GGGGAGGGTCCACGGGGAGGTGTCCAGCTGCGATTGCTGGAGGCCTaGACGATGAAGGAGAAGATGGCTTCTCGCTCCCGGTCCAGGTCC +
Preference number: 2 (lower is better)
Translates to: GEGPRGGVQLRLLEA*TMKEKMASRSRSRS
Trigger: GGACCTGGACCGGGAGCGAGAAGCCATCTTCTCCTTCATCGTCAAGGCCTCCAGCAATCGCAGCTGGACACCTCCCCGTGGACCCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CAA 90 bp CGAAGTTTGTGCAGGGGTGTGGATTTGGCGGATTCTGTGCGGGCGTaGCGCTCGAAGGCAGTGGCCTCGGCAGCGGTCAGCGTCTCCAGC +
Preference number: 2 (lower is better)
Translates to: RSLCRGVDLADSVRA*RSKAVASAAVSVSS
Trigger: GCTGGAGACGCTGACCGCTGCCGAGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAATCCACACCCCTGCACAAACTTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp GGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTCCGGCCAGCTGGGATCTGAGCAGCTaGTGCGGGCTGCCAGGGCCA +
Preference number: 2 (lower is better)
Translates to: GMWRKCSETWTGVGCPASWDLSS*CGLPGP
Trigger: TGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCCCA...GCTGGCCGGACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR TCA 90 bp CCGGTTGGCAATGACCTTCCCTGCCGAGGAGTCCTCCAGCTGGACATACCCTGGTGGGATCTGAGCAGCTaGTGCGGGCTGCCAGGGCCA +
Preference number: 2 (lower is better)
Translates to: PVGNDLPCRGVLQLDIPWWDLSS*CGLPGP
Trigger: TGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCCCA...CCAGGGTATGTCCAGCTGGAGGACTCCTCGGCAGGGAAGGTCATTGCCAACCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp TGCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCGGCAAAAGTGGGATCTaGGCAGCTGATGCGGGCTGC +
Preference number: 2 (lower is better)
Translates to: CGVELGGRRACLASFSSAGKSGI*AADAGC
Trigger: GCAGCCCGCATCAGCTGCTCAGATCCCACTTTTGCC...GGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp CCGGTTGGCAATGACCTTCCCTGCCGAGGAGTCCTCCAGCTGGACATACCCTGGCGGCTGCCACAGCAATaGGTGTGGTCCCAGGGGTGG +
Preference number: 2 (lower is better)
Translates to: PVGNDLPCRGVLQLDIPWRLPQQ*VWSQGW
Trigger: CCACCCCTGGGACCACACTCATTGCTGTGGCAGCCG...CCAGGGTATGTCCAGCTGGAGGACTCCTCGGCAGGGAAGGTCATTGCCAACCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp CGGCGATCTCACTCAGGTTCTCCGGTAGGTCATCCTCATGCTCCGCCTGGGCGGCGGCTGCATTCAGTCTaGAAAGGCTGGGCCACGGCC +
Preference number: 2 (lower is better)
Translates to: RRSHSGSPVGHPHAPPGRRLHSV*KGWATA
Trigger: GGCCGTGGCCCAGCCTTTGCAGACTGAATGCAGCCG...CCGCCCAGGCGGAGCATGAGGATGACCTACCGGAGAACCTGAGTGAGATCGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTACTCCCAGTCCCGGTTaGCCGCAGTCTTCAGGAAGC +
Preference number: 2 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPTPSPG*PQSSGS
Trigger: GCTTCCTGAAGACTGCGGGCAACCGGGACTGGGAGT...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTATTCTGTGCGGGCGTTaGGCTCGAAGGCAGTGGCCT +
Preference number: 2 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLILCGR*ARRQWP
Trigger: AGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAAT...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp TTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCCTGCCCTTGCTCCCTaGGAGGGGACGGTGGATGGG +
Preference number: 2 (lower is better)
Translates to: FGLFQLSLSQAGPQTLGPPALAP*EGTVDG
Trigger: CCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGG...GGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp GAGGGTGGGGAGCTGGAGGTCAGTGCCCTGTCTACAGGGGGCAGCGGCTGCTCACCCAGATTCCCTGTTTaGCTCAGCCTCCGAGTCGGA +
Preference number: 2 (lower is better)
Translates to: EGGELEVSALSTGGSGCSPRFPV*LSLRVG
Trigger: TCCGACTCGGAGGCTGAGCCAAACAGGGAATCTGGG...TGAGCAGCCGCTGCCCCCTGTAGACAGGGCACTGACCTCCAGCTCCCCACCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR CCA 90 bp GACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGGGAGCCCCAGTCTTGGTGGAAGCTaGCATAACACAGAGCCTCAT +
Preference number: 2 (lower is better)
Translates to: DPSRRRAHECMPHHPGSPSLGGS*HNTEPH
Trigger: ATGAGGCTCTGTGTTATGCCAGCTTCCACCAAGACT...GGGGCTCCCAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR CCA 90 bp TGCAGTGTGAGGTCAGCAACCAGGTCGAGGGTTGGGGAGGGTCCACGGGGAGGTCAGCTGGACATACCCTaGGGGCACCAGGTCCAGCAG +
Preference number: 2 (lower is better)
Translates to: CSVRSATRSRVGEGPRGGQLDIP*GHQVQQ
Trigger: CTGCTGGACCTGGTGCCCCCAGGGTATGTCCAGCTG...ACCTCCCCGTGGACCCTCCCCAACCCTCGACCTGGTTGCTGACCTCACACTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp TTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCTGGGATCTGAGCAGCTaGTGCGGGCTGCCAGGGCCA +
Preference number: 2 (lower is better)
Translates to: FGLFQLSLSQAGPQTLGPWDLSS*CGLPGP
Trigger: TGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCCCA...GGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp GCCGATGATGGCCGTGTCGTTGTGGCCTGCCAGGTCTCGGGCCACAATGTCCACGGCAAAAGTGGGATCTaGGCAGCTGATGCGGGCTGC +
Preference number: 2 (lower is better)
Translates to: ADDGRVVVACQVSGHNVHGKSGI*AADAGC
Trigger: GCAGCCCGCATCAGCTGCTCAGATCCCACTTTTGCC...GTGGACATTGTGGCCCGAGACCTGGCAGGCCACAACGACACGGCCATCATCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCAGGTCAGATGCTGAATaGGCGTCTGGCAAAAGTGGG +
Preference number: 2 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPRSDAE*ASGKSG
Trigger: CCCACTTTTGCCAGACGCTCATTCAGCATCTGACCT...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp GCGCCTGTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGTGCTCAGGCACTGTCCCACCACGGTCAGACTaGACTTCTCGTAGGACTGCA +
Preference number: 2 (lower is better)
Translates to: APVTLPTRVPRGECSGTVPPRSD*TSRRTA
Trigger: TGCAGTCCTACGAGAAGTTCAGTCTGACCGTGGTGG...GACAGTGCCTGAGCACTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp GGGGTGTGGATTTGGCGGATTCTGTGCGGGCGTTGCGCTCGAAGGCAGTGGCCTGCCACGATTCCCAGCTaGGCCAGCCACAATGGCCTT +
Preference number: 2 (lower is better)
Translates to: GVWIWRILCGRCARRQWPATIPS*ASHNGL
Trigger: AAGGCCATTGTGGCTGGCTCAGCTGGGAATCGTGGC...AGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAATCCACACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGGCAGCTGATGCGGGCTaGCAGGGCCAAGCCAAGGTT +
Preference number: 2 (lower is better)
Translates to: WEGGGPVWPLSAQPEPSWAADAG*QGQAKV
Trigger: AACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGC...CCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp GGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTCCGGCCAGCGCAGCTGATGCGGGCTaGCAGGGCCAAGCCAAGGTT +
Preference number: 2 (lower is better)
Translates to: GMWRKCSETWTGVGCPASAADAG*QGQAKV
Trigger: AACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGC...GCTGGCCGGACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR GCA 90 bp CCGGTTGGCAATGACCTTCCCTGCCGAGGAGTCCTCCAGCTGGACATACCCTGGGCAGCTGATGCGGGCTaGCAGGGCCAAGCCAAGGTT +
Preference number: 2 (lower is better)
Translates to: PVGNDLPCRGVLQLDIPWAADAG*QGQAKV
Trigger: AACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGC...CCAGGGTATGTCCAGCTGGAGGACTCCTCGGCAGGGAAGGTCATTGCCAACCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp AATGGCCCCAGTGATGTTGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCGCGCTGCGCCTGTCACGTTaGCCACGAGGGTGCCGCGTG +
Preference number: 2 (lower is better)
Translates to: NGPSDVGEQVDELLLEAALRLSR*PRGCRV
Trigger: CACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAG...CGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAACATCACTGGGGCCATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp GTTGTGGCCTGCCAGGTCTCGGGCCACAATGTCCACCACGAAGTAGCCGGGGCTGTTGGGGCCCTCATCTaGATCCACTGCGCCTGTCAC +
Preference number: 2 (lower is better)
Translates to: VVACQVSGHNVHHEVAGAVGALI*IHCACH
Trigger: GTGACAGGCGCAGTGGATGCAGATGAGGGCCCCAAC...AGCCCCGGCTACTTCGTGGTGGACATTGTGGCCCGAGACCTGGCAGGCCACAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp ATGTTGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCGCGCACACGGTCGGGGCAGCCTGAGCCAAGCTaGTCCCCAGACTCTTGGGCC +
Preference number: 2 (lower is better)
Translates to: MLESRWMNSSSKPRTRSGQPEPS*SPDSWA
Trigger: GGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTG...CCCCGACCGTGTGCGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCAGTCAGCTTGGCATTTaGCACACTGACAGAGCGCTC +
Preference number: 2 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPSQLGI*HTDRAL
Trigger: GAGCGCTCTGTCAGTGTGCCAAATGCCAAGCTGACT...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp AATGGCCCCAGTGATGTTGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCGCGGTGTGGTCCCAGGGGTaGCCCCCTCCAGGATCCGCT +
Preference number: 2 (lower is better)
Translates to: NGPSDVGEQVDELLLEAAVWSQG*PPPGSA
Trigger: AGCGGATCCTGGAGGGGGCCACCCCTGGGACCACAC...CGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAACATCACTGGGGCCATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp TCATCTGCATCCACTGCGCCTGTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGGAGTCCATGTCCACATaGAAGGCCTCCACGCCAGGG +
Preference number: 2 (lower is better)
Translates to: SSASTAPVTLPTRVPRGEESMST*KASTPG
Trigger: CCCTGGCGTGGAGGCCTTCCATGTGGACATGGACTC...CTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCAGATGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp GCGCCTGTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGTGCTCAGGCACTGTCAAGTGGAAGCCCATTTaGAGTGGAGAGCTCAGGGGC +
Preference number: 2 (lower is better)
Translates to: APVTLPTRVPRGECSGTVKWKPI*SGELRG
Trigger: GCCCCTGAGCTCTCCACTCCAAATGGGCTTCCACTT...GACAGTGCCTGAGCACTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR CAA 90 bp AGGTCGAGGGTTGGGGAGGGTCCACGGGGAGGTGTCCAGCTGCGATaGCTGGAGGCCTTGACGATGAAGGAGAAGATGGCTTCTCGCTCC +
Preference number: 2 (lower is better)
Translates to: RSRVGEGPRGGVQLR*LEALTMKEKMASRS
Trigger: GGAGCGAGAAGCCATCTTCTCCTTCATCGTCAAGGCCTCCAGCAATCGCAGCTGGACACCTCCCCGTGGACCCTCCCCAACCCTCGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CAA 90 bp GGGGTCTCCATGATCACGTCGCGAAGTTTGTGCAGGGGTGTGGATTaGGCGGATTCTGTGCGGGCGTTGCGCTCGAAGGCAGTGGCCTCG +
Preference number: 2 (lower is better)
Translates to: GVSMITSRSLCRGVD*ADSVRALRSKAVAS
Trigger: CGAGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAATCCACACCCCTGCACAAACTTCGCGACGTGATCATGGAGACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp CCCTCGCCTTTCTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGGTCAGGTCCCAAATTTaGAGGGTGGGCAGAGGGAGG +
Preference number: 2 (lower is better)
Translates to: PSPFSQLPSLPGPLQRQLVRSQI*RVGRGR
Trigger: CCTCCCTCTGCCCACCCTTCAAATTTGGGACCTGAC...CAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAGAAAGGCGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR TCA 90 bp AGTGGCCTCGGCAGCGGTCAGCGTCTCCAGCGAGCGGCCCAGGCCCTTCTGGTCGGCATTGTCAATCACTaGGAGAGTGACCTCATAGGT +
Preference number: 2 (lower is better)
Translates to: SGLGSGQRLQRAAQALLVGIVNH*ESDLIG
Trigger: ACCTATGAGGTCACTCTCTCAGTGATTGACAATGCC...GACCAGAAGGGCCTGGGCCGCTCGCTGGAGACGCTGACCGCTGCCGAGGCCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp AATGGCCCCAGTGATGTTGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCGCGGAGGGTGCCGCGTGGTaGGTGCTCAGGCACTGTCAG +
Preference number: 2 (lower is better)
Translates to: NGPSDVGEQVDELLLEAAEGAAW*VLRHCQ
Trigger: CTGACAGTGCCTGAGCACTCACCACGCGGCACCCTC...CGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAACATCACTGGGGCCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp GGGGTGTGGATTTGGCGGATTCTGTGCGGGCGTTGCGCTCGAAGGCAGTGGCCTGTGGTGGCTGGTCGTTaGTGTCCTCTAGCACAACGC +
Preference number: 2 (lower is better)
Translates to: GVWIWRILCGRCARRQWPVVAGR*CPLAQR
Trigger: GCGTTGTGCTAGAGGACATCAACGACCAGCCACCAC...AGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAATCCACACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGACGGTGGATGGGTGCTaGTCACACCCACAAGGCTTC +
Preference number: 2 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQTVDGC*SHPQGF
Trigger: GAAGCCTTGTGGGTGTGAGCAGCACCCATCCACCGT...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp TCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTACGGTGGATGGGTGCTaGTCACACCCACAAGGCTTC +
Preference number: 2 (lower is better)
Translates to: SEQLMRAARAKPRLSPRPTVDGC*SHPQGF
Trigger: GAAGCCTTGTGGGTGTGAGCAGCACCCATCCACCGT...AGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp TTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCGGGACGGTGGATGGGTaGTGCTCACACCCACAAGGC +
Preference number: 2 (lower is better)
Translates to: FGLFQLSLSQAGPQTLGPGTVDG*CSHPQG
Trigger: GCCTTGTGGGTGTGAGCAGCACCCATCCACCGTCCC...GGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp TGGACGTCCAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGAGCCGGAGGGGATGGTaGTTGCGGGGTGGAGCTGGG +
Preference number: 2 (lower is better)
Translates to: WTSSREGCGGNVARLGLESRRGW*LRGGAG
Trigger: CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCT...CTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTGGACGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR GCA 90 bp TGCAGTGTGAGGTCAGCAACCAGGTCGAGGGTTGGGGAGGGTCCACGGGGAGGTGCCACCTGCAGCGGCTaGATAGTCTCGTATGGCACT +
Preference number: 2 (lower is better)
Translates to: CSVRSATRSRVGEGPRGGATCSG*IVSYGT
Trigger: AGTGCCATACGAGACTATGCAGCCGCTGCAGGTGGC...ACCTCCCCGTGGACCCTCCCCAACCCTCGACCTGGTTGCTGACCTCACACTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp GAAGCCGCGCACACGGTCGGGGATCTCGTTAATGACGATCTTGACGCGCTGGTCGTGCCGCGTGGTGAGTaGTCAGGCACTGTCAGCAGC +
Preference number: 2 (lower is better)
Translates to: EAAHTVGDLVNDDLDALVVPRGE*SGTVSS
Trigger: GCTGCTGACAGTGCCTGAGCACTCACCACGCGGCAC...GACCAGCGCGTCAAGATCGTCATTAACGAGATCCCCGACCGTGTGCGCGGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp GGGCCCAGCCAGTGCTCTCCAGGTGGCCCTGCTCATCTGTACCCTCTGGTCATGCCAAGGAGTGAGCTCTaGCTTGTCACTCCCCACCTC +
Preference number: 2 (lower is better)
Translates to: GPSQCSPGGPAHLYPLVMPRSEL*LVTPHL
Trigger: GAGGTGGGGAGTGACAAGCCAGAGCTCACTCCTTGG...CATGACCAGAGGGTACAGATGAGCAGGGCCACCTGGAGAGCACTGGCTGGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR CCA 90 bp CCAGCTGCGATTGCTGGAGGCCTTGACGATGAAGGAGAAGATGGCTTCTCGCTCGTGTGGTCCCAGGGGTaGCCCCCTCCAGGATCCGCT +
Preference number: 2 (lower is better)
Translates to: PAAIAGGLDDEGEDGFSLVWSQG*PPPGSA
Trigger: AGCGGATCCTGGAGGGGGCCACCCCTGGGACCACAC...GAGCGAGAAGCCATCTTCTCCTTCATCGTCAAGGCCTCCAGCAATCGCAGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCAGGTCAACTCTCCATTaGGACCTTCATCCTGGTCAG +
Preference number: 2 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPRSTLH*DLHPGQ
Trigger: CTGACCAGGATGAAGGTCCCAATGGAGAGTTGACCT...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp ATGTTGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCGCGCACACGGTCGGGGGAGTCCATGTCCACATaGAAGGCCTCCACGCCAGGG +
Preference number: 2 (lower is better)
Translates to: MLESRWMNSSSKPRTRSGESMST*KASTPG
Trigger: CCCTGGCGTGGAGGCCTTCCATGTGGACATGGACTC...CCCCGACCGTGTGCGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAACAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp CGTCGCGAAGTTTGTGCAGGGGTGTGGATTTGGCGGATTCTGTGCGGGCGTTGCGCAGTGGCCGCTGTGTaGTCACCAAGCCCGAGTCCA +
Preference number: 2 (lower is better)
Translates to: RREVCAGVWIWRILCGRCAVAAV*SPSPSP
Trigger: TGGACTCGGGCTTGGTGACCACACAGCGGCCACTGC...GCAACGCCCGCACAGAATCCGCCAAATCCACACCCCTGCACAAACTTCGCGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp TTGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCGCGCACACGGTCGGGGATCGGAGGATGGTGCCGTTaGGTGGGCGCACAAAGACAG +
Preference number: 2 (lower is better)
Translates to: LESRWMNSSSKPRTRSGIGGWCR*VGAQRQ
Trigger: CTGTCTTTGTGCGCCCACCCAACGGCACCATCCTCC...GATCCCCGACCGTGTGCGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp GTTGTGGCCTGCCAGGTCTCGGGCCACAATGTCCACCACGAAGTAGCCGGGGCTAGACCTCGTACACGTTaGAGCGCAGCGGGATCTCCT +
Preference number: 2 (lower is better)
Translates to: VVACQVSGHNVHHEVAGARPRTR*SAAGSP
Trigger: AGGAGATCCCGCTGCGCTCCAACGTGTACGAGGTCT...AGCCCCGGCTACTTCGTGGTGGACATTGTGGCCCGAGACCTGGCAGGCCACAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp TGCAGTGTGAGGTCAGCAACCAGGTCGAGGGTTGGGGAGGGTCCACGGGGAGGTAGACCTCGTACACGTTaGAGCGCAGCGGGATCTCCT +
Preference number: 2 (lower is better)
Translates to: CSVRSATRSRVGEGPRGGRPRTR*SAAGSP
Trigger: AGGAGATCCCGCTGCGCTCCAACGTGTACGAGGTCT...ACCTCCCCGTGGACCCTCCCCAACCCTCGACCTGGTTGCTGACCTCACACTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp CGTTGTGGCCTGCCAGGTCTCGGGCCACAATGTCCACCACGAAGTAGCCGGGGCAGTACACGATCGCGTTaGGGCCCTCATCTGCATCCA +
Preference number: 2 (lower is better)
Translates to: RCGLPGLGPQCPPRSSRGSTRSR*GPHLHP
Trigger: TGGATGCAGATGAGGGCCCCAACGCGATCGTGTACT...GCCCCGGCTACTTCGTGGTGGACATTGTGGCCCGAGACCTGGCAGGCCACAACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp GAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCAGGGGCTGAGGCTCTaGCAAGAAGAAAAGGTAGCA +
Preference number: 2 (lower is better)
Translates to: EQLMRAARAKPRLSPRPGQGLRL*QEEKVA
Trigger: TGCTACCTTTTCTTCTTGCCAGAGCCTCAGCCCCTG...GCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR CAA 90 bp TGGCCCCTCTTCAGGGCACCCACGTTGGGATCAATCAGGAAGGGATaGAAGATGATCGAGGAGGCTCCCTTCAGAGGCCAGGGCGGGTGC +
Preference number: 2 (lower is better)
Translates to: WPLFRAPTLGSIRKG*KMIEEAPFRGQGGC
Trigger: GCACCCGCCCTGGCCTCTGAAGGGAGCCTCCTCGATCATCTTCAATCCCTTCCTGATTGATCCCAACGTGGGTGCCCTGAAGAGGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CAA 90 bp AGGATGGTGCCGTTGGGTGGGCGCACAAAGACAGGGCGGTTGTCATaGACGTCGATGACCTCCACCAGGAGCATGGTGGTGCCCCAGAGT +
Preference number: 2 (lower is better)
Translates to: RMVPLGGRTKTGRLS*TSMTSTRSMVVPQS
Trigger: ACTCTGGGGCACCACCATGCTCCTGGTGGAGGTCATCGACGTCAATGACAACCGCCCTGTCTTTGTGCGCCCACCCAACGGCACCATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CAA 90 bp ATGTGGAGGATGGTGCCGTTGGGTGGGCGCACAAAGACAGGGCGGTaGTCATTGACGTCGATGACCTCCACCAGGAGCATGGTGGTGCCC +
Preference number: 2 (lower is better)
Translates to: MWRMVPLGGRTKTGR*SLTSMTSTRSMVVP
Trigger: GGGCACCACCATGCTCCTGGTGGAGGTCATCGACGTCAATGACAACCGCCCTGTCTTTGTGCGCCCACCCAACGGCACCATCCTCCACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp GCCTTGGTGAAGCGTGGTGGCTGGTCGTTGATGTCCTCTAGCACAACGCGCACCCGGGGACCCGTTGTCTaGGGCCCTCACGGTAAAGTT +
Preference number: 2 (lower is better)
Translates to: ALVKRGGWSLMSSSTTRTRGPVV*GPHGKV
Trigger: AACTTTACCGTGAGGGCCTCAGACAACGGGTCCCCG...GGTGCGCGTTGTGCTAGAGGACATCAACGACCAGCCACCACGCTTCACCAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp TTGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCGCGCACACGGTCGGGGATCCACCCGTGGTGGGGTTaGTGGCAAACTTGCTCTCTC +
Preference number: 2 (lower is better)
Translates to: LESRWMNSSSKPRTRSGIHPWWG*WQTCSL
Trigger: GAGAGAGCAAGTTTGCCATCAACCCCACCACGGGTG...GATCCCCGACCGTGTGCGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp TCATCTGCATCCACTGCGCCTGTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGGTGGCCGGCAGTCATTaGCATCCAGCACTTGGATCA +
Preference number: 2 (lower is better)
Translates to: SSASTAPVTLPTRVPRGEVAGSH*HPALGS
Trigger: TGATCCAAGTGCTGGATGTCAATGACTGCCGGCCAC...CTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCAGATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp CGGCGATCTCACTCAGGTTCTCCGGTAGGTCATCCTCATGCTCCGCCTGGGCGGGCCAGGGCCCTCAAGTaGGTAGGTCAACTCTCCATT +
Preference number: 2 (lower is better)
Translates to: RRSHSGSPVGHPHAPPGRARALK*VGQLSI
Trigger: AATGGAGAGTTGACCTACTCACTTGAGGGCCCTGGC...CCGCCCAGGCGGAGCATGAGGATGACCTACCGGAGAACCTGAGTGAGATCGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp GCCGATGATGGCCGTGTCGTTGTGGCCTGCCAGGTCTCGGGCCACAATGTCCACCCACCACGGTCAGACTaGACTTCTCGTAGGACTGCA +
Preference number: 2 (lower is better)
Translates to: ADDGRVVVACQVSGHNVHPPRSD*TSRRTA
Trigger: TGCAGTCCTACGAGAAGTTCAGTCTGACCGTGGTGG...GTGGACATTGTGGCCCGAGACCTGGCAGGCCACAACGACACGGCCATCATCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp CGCACACGGTCGGGGATCTCGTTAATGACGATCTTGACGCGCTGGTCGTCCCTCGCACCTCCTGCAGTGTaGGGTCAGCAACCAGGTCGA +
Preference number: 2 (lower is better)
Translates to: RTRSGISLMTILTRWSSLAPPAV*GQQPGR
Trigger: TCGACCTGGTTGCTGACCTCACACTGCAGGAGGTGC...GAGGGACGACCAGCGCGTCAAGATCGTCATTAACGAGATCCCCGACCGTGTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp CTCCTGGCTCCTCGTCCAGCTCAGTCTGTATCAGCTCAGAGATGGAGGAGTGGCCGGGGCTGTAGGCCATaGAGAGGTCGAAGGTGCGCA +
Preference number: 2 (lower is better)
Translates to: LLAPRPAQSVSAQRWRSGRGCRP*RGRRCA
Trigger: TGCGCACCTTCGACCTCTTCATGGCCTACAGCCCCG...GCCACTCCTCCATCTCTGAGCTGATACAGACTGAGCTGGACGAGGAGCCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR-3UTR GCA 90 bp CTCATCGATCATCTGGATCACCCGGTCCACGTCCAGGATGCGGTTGGTATCGCGGCAGCTGATGCGGGCTaGCAGGGCCAAGCCAAGGTT +
Preference number: 2 (lower is better)
Translates to: LIDHLDHPVHVQDAVGIAAADAG*QGQAKV
Trigger: AACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGC...CGCGATACCAACCGCATCCTGGACGTGGACCGGGTGATCCAGATGATCGATGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp GAGAGTGACCTCATAGGTGGCAACCAGCTCCCGATTCATGGGGGACTTCACCATAGCCGGAGGGGATGGTaGTTGCGGGGTGGAGCTGGG +
Preference number: 2 (lower is better)
Translates to: ESDLIGGNQLPIHGGLHHSRRGW*LRGGAG
Trigger: CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCT...ATGGTGAAGTCCCCCATGAATCGGGAGCTGGTTGCCACCTATGAGGTCACTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp GCTGCCCAGCTCCTGTCCCAGTCAGCTGGCCAGGATCCCACCACAAAGCTGCCCACCAGCTTGGGAGCTTaGAGAGAGCCAGACATTGTC +
Preference number: 2 (lower is better)
Translates to: AAQLLSQSAGQDPTTKLPTSLGA*REPDIV
Trigger: GACAATGTCTGGCTCTCTGCAAGCTCCCAAGCTGGT...GGGCAGCTTTGTGGTGGGATCCTGGCCAGCTGACTGGGACAGGAGCTGGGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR GCA 90 bp GTGGCCATGATGCTGTCCAGTTTAACAGTGCCTTGCCCCCATCCACATTCCCTATCCCTCGACAGCCCCTaGCGGGCCCCGAGGACAACC +
Preference number: 2 (lower is better)
Translates to: VAMMLSSLTVPCPHPHSLSLDSP*RAPRTT
Trigger: GGTTGTCCTCGGGGCCCGGCAGGGGCTGTCGAGGGA...TAGGGAATGTGGATGGGGGCAAGGCACTGTTAAACTGGACAGCATCATGGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR-3UTR GCA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTATAAGCAGTTCTGTCTaGGCAAAGTTCACCCGGCCC +
Preference number: 2 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPISSSV*AKFTRP
Trigger: GGGCCGGGTGAACTTTGCGCAGACAGAACTGCTTAT...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp GGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGATCTGAGCAGCTGATGCGGCCTGCCCTTGCTCCCTaGGAGGGGACGGTGGATGGG +
Preference number: 2 (lower is better)
Translates to: GQMLNERLAKVGSEQLMRPALAP*EGTVDG
Trigger: CCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGG...CCGCATCAGCTGCTCAGATCCCACTTTTGCCAGACGCTCATTCAGCATCTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp ACGATGATCGCCATCTGCAGGGCAGACATGTCATCCGGCAGCCGGACAGAGATGCAGCCTGAGCCAAGCTaGTCCCCAGACTCTTGGGCC +
Preference number: 2 (lower is better)
Translates to: TMIAICRADMSSGSRTEMQPEPS*SPDSWA
Trigger: GGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTG...CATCTCTGTCCGGCTGCCGGATGACATGTCTGCCCTGCAGATGGCGATCATCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp ATGCGGACAGGCCACCGCCCTCTTGTCTGCATGGCAGATGGGCACAGGGTGGAAGGGAGGGCTCTCAATTaGGTTTCAGGCACCAGGCCA +
Preference number: 2 (lower is better)
Translates to: MRTGHRPLVCMADGHRVEGRALN*VSGTRP
Trigger: TGGCCTGGTGCCTGAAACCCAATTGAGAGCCCTCCC...TTCCACCCTGTGCCCATCTGCCATGCAGACAAGAGGGCGGTGGCCTGTCCGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR CCA 90 bp GTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGTGCTCAGGCACTGTCAGCAGCCCAGCTCCCGATTCATaGGGGACTTCACCATTACAG +
Preference number: 2 (lower is better)
Translates to: VTLPTRVPRGECSGTVSSPAPDS*GTSPLQ
Trigger: CTGTAATGGTGAAGTCCCCCATGAATCGGGAGCTGG...GCTGCTGACAGTGCCTGAGCACTCACCACGCGGCACCCTCGTGGGCAACGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp CTGGTCAGTGGCCATCATGGTGATGACCGAGGTGCCCGCCGGCTCATTCTCATAGAGGAGTCCTCCAGCTaGACATACCCTGGGGGCACC +
Preference number: 2 (lower is better)
Translates to: LVSGHHGDDRGARRLILIEESSS*TYPGGT
Trigger: GGTGCCCCCAGGGTATGTCCAGCTGGAGGACTCCTC...TATGAGAATGAGCCGGCGGGCACCTCGGTCATCACCATGATGGCCACTGACCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp CATCCAGGGCCAGCACCTGGATCAACTCTGAGCCCACCTTGGCGTCGGTGGCCAGGGCTTGGAGAACTGTaGCCGGCAGTCATTGACATC +
Preference number: 2 (lower is better)
Translates to: HPGPAPGSTLSPPWRRWPGLGEL*PAVIDI
Trigger: GATGTCAATGACTGCCGGCCACAGTTCTCCAAGCCC...TGGCCACCGACGCCAAGGTGGGCTCAGAGTTGATCCAGGTGCTGGCCCTGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp CTCATCGATCATCTGGATCACCCGGTCCACGTCCAGGATGCGGTTGGTATCGCGGATGGTGCCGTTGGGTaGGCGCACAAAGACAGGGCG +
Preference number: 2 (lower is better)
Translates to: LIDHLDHPVHVQDAVGIADGAVG*AHKDRA
Trigger: CGCCCTGTCTTTGTGCGCCCACCCAACGGCACCATC...CGCGATACCAACCGCATCCTGGACGTGGACCGGGTGATCCAGATGATCGATGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp ACGATGATCGCCATCTGCAGGGCAGACATGTCATCCGGCAGCCGGACAGAGATGCCACCTTGGCGTCGGTaGCCACCCCTGCAGTGTACT +
Preference number: 2 (lower is better)
Translates to: TMIAICRADMSSGSRTEMPPWRR*PPLQCT
Trigger: AGTACACTGCAGGGGTGGCCACCGACGCCAAGGTGG...CATCTCTGTCCGGCTGCCGGATGACATGTCTGCCCTGCAGATGGCGATCATCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp CTCCTGGCTCCTCGTCCAGCTCAGTCTGTATCAGCTCAGAGATGGAGGAGTGGCCTGCCGTGCACCACATaGATCCCATCGGGCCCCTTG +
Preference number: 2 (lower is better)
Translates to: LLAPRPAQSVSAQRWRSGLPCTT*IPSGPL
Trigger: CAAGGGGCCCGATGGGATCCATGTGGTGCACGGCAG...GCCACTCCTCCATCTCTGAGCTGATACAGACTGAGCTGGACGAGGAGCCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR CAA 90 bp TTGGAGCGCAGCGGGATCTCCTCTCTGATGTGGAGGATGGTGCCGTaGGGTGGGCGCACAAAGACAGGGCGGTTGTCATTGACGTCGATG +
Preference number: 2 (lower is better)
Translates to: LERSGISSLMWRMVP*GGRTKTGRLSLTSM
Trigger: CATCGACGTCAATGACAACCGCCCTGTCTTTGTGCGCCCACCCAACGGCACCATCCTCCACATCAGAGAGGAGATCCCGCTGCGCTCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp CTGGTCAGTGGCCATCATGGTGATGACCGAGGTGCCCGCCGGCTCATTCTCATAGGCAAAAGTGGGATCTaGGCAGCTGATGCGGGCTGC +
Preference number: 2 (lower is better)
Translates to: LVSGHHGDDRGARRLILIGKSGI*AADAGC
Trigger: GCAGCCCGCATCAGCTGCTCAGATCCCACTTTTGCC...TATGAGAATGAGCCGGCGGGCACCTCGGTCATCACCATGATGGCCACTGACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp AGGATGGGCTTCTCAGAATCCCAAACCCTTGACCTCTCCTCACAACGCGAGGGTTCCCCACCCAGCAACTaGGGCCTCTGGGCAGAGGTG +
Preference number: 2 (lower is better)
Translates to: RMGFSESQTLDLSSQREGSPPSN*GLWAEV
Trigger: CACCTCTGCCCAGAGGCCTCAGTTGCTGGGTGGGGA...ACCCTCGCGTTGTGAGGAGAGGTCAAGGGTTTGGGATTCTGAGAAGCCCATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR TCA 90 bp GCGCCTGTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGTGCTCAGGCACTGTCTGGGGTTGTTGTCATTaGTGTCCACGATTTCCAGGT +
Preference number: 2 (lower is better)
Translates to: APVTLPTRVPRGECSGTVWGCCH*CPRFPG
Trigger: ACCTGGAAATCGTGGACATCAATGACAACAACCCCA...GACAGTGCCTGAGCACTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp CTCCTGGCTCCTCGTCCAGCTCAGTCTGTATCAGCTCAGAGATGGAGGAGTGGCCACCTGGATCAACTCTaGGCCCACCTTGGCGTCGGT +
Preference number: 2 (lower is better)
Translates to: LLAPRPAQSVSAQRWRSGHLDQL*AHLGVG
Trigger: ACCGACGCCAAGGTGGGCTCAGAGTTGATCCAGGTG...GCCACTCCTCCATCTCTGAGCTGATACAGACTGAGCTGGACGAGGAGCCAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR-3UTR TCA 90 bp ATGAACTCCTCCTCGAAGCCGCGCACACGGTCGGGGATCTCGTTAATGACGATCCGGGGCTGTAGGCCATaGAGAGGTCGAAGGTGCGCA +
Preference number: 2 (lower is better)
Translates to: MNSSSKPRTRSGISLMTIRGCRP*RGRRCA
Trigger: TGCGCACCTTCGACCTCTTCATGGCCTACAGCCCCG...GATCGTCATTAACGAGATCCCCGACCGTGTGCGCGGCTTCGAGGAGGAGTTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp TGGACGTCCAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGGGGACGGTGGATGGGTaGTGCTCACACCCACAAGGC +
Preference number: 2 (lower is better)
Translates to: WTSSREGCGGNVARLGLEGTVDG*CSHPQG
Trigger: GCCTTGTGGGTGTGAGCAGCACCCATCCACCGTCCC...CTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTGGACGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR GCA 90 bp ACGGTCGGGGATCTCGTTAATGACGATCTTGACGCGCTGGTCGTCCCTCAGGATGGGACGGTGGATGGGTaGTGCTCACACCCACAAGGC +
Preference number: 2 (lower is better)
Translates to: TVGDLVNDDLDALVVPQDGTVDG*CSHPQG
Trigger: GCCTTGTGGGTGTGAGCAGCACCCATCCACCGTCCC...ATCCTGAGGGACGACCAGCGCGTCAAGATCGTCATTAACGAGATCCCCGACCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp AGGATGGGCTTCTCAGAATCCCAAACCCTTGACCTCTCCTCACAACGCGAGGGTCAGCGCAGTGTGCAGTaGCCTCTGGGAGCTGGCTCC +
Preference number: 2 (lower is better)
Translates to: RMGFSESQTLDLSSQREGQRSVQ*PLGAGS
Trigger: GGAGCCAGCTCCCAGAGGGCACTGCACACTGCGCTG...ACCCTCGCGTTGTGAGGAGAGGTCAAGGGTTTGGGATTCTGAGAAGCCCATCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR GCA 90 bp GTGGCCATGATGCTGTCCAGTTTAACAGTGCCTTGCCCCCATCCACATTCCCTAGGGCTCACGAGTGCATaGCCCACCACCCTGGGAGCC +
Preference number: 2 (lower is better)
Translates to: VAMMLSSLTVPCPHPHSLGLTSA*PTTLGA
Trigger: GGCTCCCAGGGTGGTGGGGCATGCACTCGTGAGCCC...TAGGGAATGTGGATGGGGGCAAGGCACTGTTAAACTGGACAGCATCATGGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR-3UTR GCA 90 bp CGGCGATCTCACTCAGGTTCTCCGGTAGGTCATCCTCATGCTCCGCCTGGGCGGAATTTTCGCGACGGTTaGTGGCTACATCCCCAGGGT +
Preference number: 2 (lower is better)
Translates to: RRSHSGSPVGHPHAPPGRNFRDG*WLHPQG
Trigger: ACCCTGGGGATGTAGCCAGCAACCGTCGCGAAAATT...CCGCCCAGGCGGAGCATGAGGATGACCTACCGGAGAACCTGAGTGAGATCGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp GTGGATAAGCAGTTCTGTCTGCGCAAAGTTCACCCGGCCCTTCTTGTCCACATGAGGCTGTACACCGCCTaGGACTCGCGGTCCAGGCGC +
Preference number: 2 (lower is better)
Translates to: VDKQFCLRKVHPALLVHMRLYTA*DSRSRR
Trigger: GCGCCTGGACCGCGAGTCGCAGGCGGTGTACAGCCT...CATGTGGACAAGAAGGGCCGGGTGAACTTTGCGCAGACAGAACTGCTTATCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp CGCACACGGTCGGGGATCTCGTTAATGACGATCTTGACGCGCTGGTCGTCCCTCGGTCCACGTCCAGGATaGGGTTGGTATCGCGGTTCA +
Preference number: 2 (lower is better)
Translates to: RTRSGISLMTILTRWSSLGPRPG*GWYRGS
Trigger: TGAACCGCGATACCAACCGCATCCTGGACGTGGACC...GAGGGACGACCAGCGCGTCAAGATCGTCATTAACGAGATCCCCGACCGTGTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp CAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTGGAGGGGACGGTGGATaGGTGCTGCTCACACCCACA +
Preference number: 2 (lower is better)
Translates to: QQRGMWRKCSETWTGVGCGGDGG*VLLTPT
Trigger: TGTGGGTGTGAGCAGCACCCATCCACCGTCCCCTCC...ACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR CCA 90 bp AAAAACATGGCAAGGACCCAACTAAACACACCCGTGGGCCCCCAGTTTGCAGCTTTCCTGCCCGCCTCCTaGTCCCGATGCAGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: KNMARTQLNTPVGPQFAAFLPAS*SRCREG
Trigger: CCCCTCCCTGCATCGGGACCAGGAGGCGGGCAGGAA...AGCTGCAAACTGGGGGCCCACGGGTGTGTTTAGTTGGGTCCTTGCCATGTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR CCA 90 bp CGTTGGGGCCCTCATCTGCATCCACTGCGCCTGTCACGTTGCCCACGAGGGTGCCCAAAGGGCTTGAACTaGGGCGTATTGTCATTGACG +
Preference number: 2 (lower is better)
Translates to: RWGPHLHPLRLSRCPRGCPKGLN*GVLSLT
Trigger: CGTCAATGACAATACGCCCCAGTTCAAGCCCTTTGG...GCACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCAGATGAGGGCCCCAACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp CCTGGATCAACTCTGAGCCCACCTTGGCGTCGGTGGCCACCCCTGCAGTGTACTGGGCTTGGAGAACTGTaGCCGGCAGTCATTGACATC +
Preference number: 2 (lower is better)
Translates to: PGSTLSPPWRRWPPLQCTGLGEL*PAVIDI
Trigger: GATGTCAATGACTGCCGGCCACAGTTCTCCAAGCCC...AGTACACTGCAGGGGTGGCCACCGACGCCAAGGTGGGCTCAGAGTTGATCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp CTGCAGTGGCCGCTGTGTGGTCACCAAGCCCGAGTCCATGTCCACATGGAAGGCACGCTTGTGCTGAACTaGGGCTTGGAGAACTGTGGC +
Preference number: 2 (lower is better)
Translates to: LQWPLCGHQARVHVHMEGTLVLN*GLENCG
Trigger: GCCACAGTTCTCCAAGCCCCAGTTCAGCACAAGCGT...GCCTTCCATGTGGACATGGACTCGGGCTTGGTGACCACACAGCGGCCACTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp AATGGCCCCAGTGATGTTGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCGCGGTCAGCAGCTGGTACTaGGGGCTGCCTTTTGGAGGC +
Preference number: 2 (lower is better)
Translates to: NGPSDVGEQVDELLLEAAVSSWY*GLPFGG
Trigger: GCCTCCAAAAGGCAGCCCCCAGTACCAGCTGCTGAC...CGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAACATCACTGGGGCCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp AATGGCCCCAGTGATGTTGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCGCGTCCAGGGCCAGCACCTaGATCAACTCTGAGCCCACC +
Preference number: 2 (lower is better)
Translates to: NGPSDVGEQVDELLLEAASRAST*INSEPT
Trigger: GGTGGGCTCAGAGTTGATCCAGGTGCTGGCCCTGGA...CGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAACATCACTGGGGCCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp CGTTGTGGCCTGCCAGGTCTCGGGCCACAATGTCCACCACGAAGTAGCCGGGGCCCCGGAAGTAGTGGATaGCCAGAATGCTGTAGAAGA +
Preference number: 2 (lower is better)
Translates to: RCGLPGLGPQCPPRSSRGPGSSG*PECCRR
Trigger: TCTTCTACAGCATTCTGGCCATCCACTACTTCCGGG...GCCCCGGCTACTTCGTGGTGGACATTGTGGCCCGAGACCTGGCAGGCCACAACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CAA 90 bp TGGTCTTGGCAGCCGTCTTGGTGGCCCCTCTTCAGGGCACCCACGTaGGGATCAATCAGGAAGGGATTGAAGATGATCGAGGAGGCTCCC +
Preference number: 2 (lower is better)
Translates to: WSWQPSWWPLFRAPT*GSIRKGLKMIEEAP
Trigger: GGGAGCCTCCTCGATCATCTTCAATCCCTTCCTGATTGATCCCAACGTGGGTGCCCTGAAGAGGGGCCACCAAGACGGCTGCCAAGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CAA 90 bp AGGAGGAGCAAACAGGGCTCTCCAAGCATGGTCTTGGCAGCCGTCTaGGTGGCCCCTCTTCAGGGCACCCACGTTGGGATCAATCAGGAA +
Preference number: 2 (lower is better)
Translates to: RRSKQGSPSMVLAAV*VAPLQGTHVGINQE
Trigger: TTCCTGATTGATCCCAACGTGGGTGCCCTGAAGAGGGGCCACCAAGACGGCTGCCAAGACCATGCTTGGAGAGCCCTGTTTGCTCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CAA 90 bp CGTAACCACCTCCTAGAAGCAGCACCCTCGCTCGCCACAGAAGCCTaGCCCTCCAGGTGCCAAAGCCCAGCATGGAGAAGTTGCCAAATG +
Preference number: 2 (lower is better)
Translates to: RNHLLEAAPSLATEA*PSRCQSPAWRSCQM
Trigger: CATTTGGCAACTTCTCCATGCTGGGCTTTGGCACCTGGAGGGCAAGGCTTCTGTGGCGAGCGAGGGTGCTGCTTCTAGGAGGTGGTTACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR CAA 90 bp ACCCCTGCAGTGTACTCAGCCTTGGTGAAGCGTGGTGGCTGGTCGTaGATGTCCTCTAGCACAACGCGCACCTCCTGCAGTGTGAGGTCA +
Preference number: 2 (lower is better)
Translates to: TPAVYSALVKRGGWS*MSSSTTRTSCSVRS
Trigger: TGACCTCACACTGCAGGAGGTGCGCGTTGTGCTAGAGGACATCAACGACCAGCCACCACGCTTCACCAAGGCTGAGTACACTGCAGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CAA 90 bp AGCAGCGAGCCCTTGATTGGCCCCTCACGAATGATCTGGCCCAGCTaGGCAATGTTGTCATACTCCTGGATGGCAGCCCGCAGGTATCGG +
Preference number: 2 (lower is better)
Translates to: SSEPLIGPSRMIWPS*AMLSYSWMAARRYR
Trigger: CCGATACCTGCGGGCTGCCATCCAGGAGTATGACAACATTGCCAAGCTGGGCCAGATCATTCGTGAGGGGCCAATCAAGGGCTCGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR-3UTR TCA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGGTAGAGGTCAGATGCTaGATGAGCGTCTGGCAAAAG +
Preference number: 2 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQVEVRC*MSVWQK
Trigger: CTTTTGCCAGACGCTCATTCAGCATCTGACCTCTAC...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp GCCGATGATGGCCGTGTCGTTGTGGCCTGCCAGGTCTCGGGCCACAATGTCCACGTAGAGGTCAGATGCTaGATGAGCGTCTGGCAAAAG +
Preference number: 2 (lower is better)
Translates to: ADDGRVVVACQVSGHNVHVEVRC*MSVWQK
Trigger: CTTTTGCCAGACGCTCATTCAGCATCTGACCTCTAC...GTGGACATTGTGGCCCGAGACCTGGCAGGCCACAACGACACGGCCATCATCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp TCATCTGCATCCACTGCGCCTGTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGGTAGAGGTCAGATGCTaGATGAGCGTCTGGCAAAAG +
Preference number: 2 (lower is better)
Translates to: SSASTAPVTLPTRVPRGEVEVRC*MSVWQK
Trigger: CTTTTGCCAGACGCTCATTCAGCATCTGACCTCTAC...CTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCAGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp GATGAGGCCACATTCCTCCAAGTCACTGCTCTGTCACCCAGACTTGGGGCGGGGCCAACAGTAGAGCCCTaGCCTCTTTTCCACCCTCAC +
Preference number: 2 (lower is better)
Translates to: DEATFLQVTALSPRLGAGPTVEP*PLFHPH
Trigger: GTGAGGGTGGAAAAGAGGTCAGGGCTCTACTGTTGG...CCCCGCCCCAAGTCTGGGTGACAGAGCAGTGACTTGGAGGAATGTGGCCTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299366.11
3UTR-3UTR TCA 90 bp ATTTGGCGGATTCTGTGCGGGCGTTGCGCTCGAAGGCAGTGGCCTCGGCAGCGGGGCATTGTCAATCACTaGGAGAGTGACCTCATAGGT +
Preference number: 2 (lower is better)
Translates to: IWRILCGRCARRQWPRQRGIVNH*ESDLIG
Trigger: ACCTATGAGGTCACTCTCTCAGTGATTGACAATGCC...CCGCTGCCGAGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp AATGGCCCCAGTGATGTTGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCGCGCACCCGTGGTGGGGTTaGTGGCAAACTTGCTCTCTC +
Preference number: 2 (lower is better)
Translates to: NGPSDVGEQVDELLLEAAHPWWG*WQTCSL
Trigger: GAGAGAGCAAGTTTGCCATCAACCCCACCACGGGTG...CGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAACATCACTGGGGCCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp TGGTCGTTGATGTCCTCTAGCACAACGCGCACCTCCTGCAGTGTGAGGTCAGCAGCGGGATCTCCTCTCTaGTGTGGAGGATGGTGCCGT +
Preference number: 2 (lower is better)
Translates to: WSLMSSSTTRTSCSVRSAAGSPL*CGGWCR
Trigger: ACGGCACCATCCTCCACATCAGAGAGGAGATCCCGC...TGCTGACCTCACACTGCAGGAGGTGCGCGTTGTGCTAGAGGACATCAACGACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp ATGAACTCCTCCTCGAAGCCGCGCACACGGTCGGGGATCTCGTTAATGACGATCGCACCTCCTGCAGTGTaGGGTCAGCAACCAGGTCGA +
Preference number: 2 (lower is better)
Translates to: MNSSSKPRTRSGISLMTIAPPAV*GQQPGR
Trigger: TCGACCTGGTTGCTGACCTCACACTGCAGGAGGTGC...GATCGTCATTAACGAGATCCCCGACCGTGTGCGCGGCTTCGAGGAGGAGTTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp CTGGTCAGTGGCCATCATGGTGATGACCGAGGTGCCCGCCGGCTCATTCTCATAACGGTGGATGGGTGCTaGTCACACCCACAAGGCTTC +
Preference number: 2 (lower is better)
Translates to: LVSGHHGDDRGARRLILITVDGC*SHPQGF
Trigger: GAAGCCTTGTGGGTGTGAGCAGCACCCATCCACCGT...TATGAGAATGAGCCGGCGGGCACCTCGGTCATCACCATGATGGCCACTGACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp GAGAGTGACCTCATAGGTGGCAACCAGCTCCCGATTCATGGGGGACTTCACCATGGGACGGTGGATGGGTaGTGCTCACACCCACAAGGC +
Preference number: 2 (lower is better)
Translates to: ESDLIGGNQLPIHGGLHHGTVDG*CSHPQG
Trigger: GCCTTGTGGGTGTGAGCAGCACCCATCCACCGTCCC...ATGGTGAAGTCCCCCATGAATCGGGAGCTGGTTGCCACCTATGAGGTCACTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp AGTGGGGCTCAGGGCTCCTCCCTAGGAATCATGGGGCCTTACCTCCCTCTAGAAGATGCTCCCCGTCCCTaGAACCAACAGGTTCAGGAG +
Preference number: 2 (lower is better)
Translates to: SGAQGSSLGIMGPYLPLEDAPRP*NQQVQE
Trigger: CTCCTGAACCTGTTGGTTGCAGGGACGGGGAGCATC...TTCTAGAGGGAGGTAAGGCCCCATGATTCCTAGGGAGGAGCCCTGAGCCCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299366.11
3UTR-3UTR GCA 90 bp AGGATGGGCTTCTCAGAATCCCAAACCCTTGACCTCTCCTCACAACGCGAGGGTTGCTGTGACCCACAGTaGAGCCAGCCACGTCTCCCC +
Preference number: 2 (lower is better)
Translates to: RMGFSESQTLDLSSQREGCCDPQ*SQPRLP
Trigger: GGGGAGACGTGGCTGGCTGCACTGTGGGTCACAGCA...ACCCTCGCGTTGTGAGGAGAGGTCAAGGGTTTGGGATTCTGAGAAGCCCATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR GCA 90 bp CTCATCGATCATCTGGATCACCCGGTCCACGTCCAGGATGCGGTTGGTATCGCGGTCAGGGTCCACGGCTaGCACAGCAATGAGTGTGGT +
Preference number: 2 (lower is better)
Translates to: LIDHLDHPVHVQDAVGIAVRVHG*HSNECG
Trigger: ACCACACTCATTGCTGTGGCAGCCGTGGACCCTGAC...CGCGATACCAACCGCATCCTGGACGTGGACCGGGTGATCCAGATGATCGATGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp AATGGCCCCAGTGATGTTGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCGCGACAACGCGCACCTCCTaGAGTGTGAGGTCAGCAACC +
Preference number: 2 (lower is better)
Translates to: NGPSDVGEQVDELLLEAATTRTS*SVRSAT
Trigger: GGTTGCTGACCTCACACTGCAGGAGGTGCGCGTTGT...CGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAACATCACTGGGGCCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp ATGTTGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCGCGCACACGGTCGGGGATAAGCAGTTCTGTCTaGGCAAAGTTCACCCGGCCC +
Preference number: 2 (lower is better)
Translates to: MLESRWMNSSSKPRTRSGISSSV*AKFTRP
Trigger: GGGCCGGGTGAACTTTGCGCAGACAGAACTGCTTAT...CCCCGACCGTGTGCGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp GTAGGCCATGAAGAGGTCGAAGGTGCGCAGAATGCCGTCCATGCTCCCCATGGTGGAGGAGGGCCTGTTTaGCCTCTTTCAGCTCAGCCT +
Preference number: 2 (lower is better)
Translates to: VGHEEVEGAQNAVHAPHGGGGPV*PLSAQP
Trigger: AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCC...ACCATGGGGAGCATGGACGGCATTCTGCGCACCTTCGACCTCTTCATGGCCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp GCAATGTTGTCATACTCCTGGATGGCAGCCCGCAGGTATCGGTCATCATCAGGCTCAGTCTGCAAAGGCTaGGCCACGGCCTTGGCCCAG +
Preference number: 2 (lower is better)
Translates to: AMLSYSWMAARRYRSSSGSVCKG*ATALAQ
Trigger: CTGGGCCAAGGCCGTGGCCCAGCCTTTGCAGACTGA...GCCTGATGATGACCGATACCTGCGGGCTGCCATCCAGGAGTATGACAACATTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp ACGGTCGGGGATCTCGTTAATGACGATCTTGACGCGCTGGTCGTCCCTCAGGATACCATTACAGATCCCTaGGCCGCCTCCTCCTCCTCC +
Preference number: 2 (lower is better)
Translates to: TVGDLVNDDLDALVVPQDTITDP*AASSSS
Trigger: GGAGGAGGAGGAGGCGGCCCAGGGATCTGTAATGGT...ATCCTGAGGGACGACCAGCGCGTCAAGATCGTCATTAACGAGATCCCCGACCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp GGGGTGTGGATTTGGCGGATTCTGTGCGGGCGTTGCGCTCGAAGGCAGTGGCCTGCTCTGGTAGGTCGCTaGCATTGTCAATCACTGAGA +
Preference number: 2 (lower is better)
Translates to: GVWIWRILCGRCARRQWPALVGR*HCQSLR
Trigger: TCTCAGTGATTGACAATGCCAGCGACCTACCAGAGC...AGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAATCCACACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp CCACCTGCACTGAATTTTCGCGACGGTTGCTGGCTACATCCCCAGGGTTGTCTTGAGGAGTCCTCCAGCTaGACATACCCTGGGGGCACC +
Preference number: 2 (lower is better)
Translates to: PPALNFRDGCWLHPQGCLEESSS*TYPGGT
Trigger: GGTGCCCCCAGGGTATGTCCAGCTGGAGGACTCCTC...AAGACAACCCTGGGGATGTAGCCAGCAACCGTCGCGAAAATTCAGTGCAGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp TGGATAAGCAGTTCTGTCTGCGCAAAGTTCACCCGGCCCTTCTTGTCCACATGGATGGCCGTGTCGTTGTaGCCTGCCAGGTCTCGGGCC +
Preference number: 2 (lower is better)
Translates to: WISSSVCAKFTRPFLSTWMAVSL*PARSRA
Trigger: GGCCCGAGACCTGGCAGGCCACAACGACACGGCCAT...CCATGTGGACAAGAAGGGCCGGGTGAACTTTGCGCAGACAGAACTGCTTATCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp ATGTTGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCGCGCACACGGTCGGGGTTCTCATCGATCATCTaGATCACCCGGTCCACGTCC +
Preference number: 2 (lower is better)
Translates to: MLESRWMNSSSKPRTRSGFSSII*ITRSTS
Trigger: GGACGTGGACCGGGTGATCCAGATGATCGATGAGAA...CCCCGACCGTGTGCGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp CGTCGCGAAGTTTGTGCAGGGGTGTGGATTTGGCGGATTCTGTGCGGGCGTTGCTGTCATACTCCTGGATaGCAGCCCGCAGGTATCGGT +
Preference number: 2 (lower is better)
Translates to: RREVCAGVWIWRILCGRCCHTPG*QPAGIG
Trigger: ACCGATACCTGCGGGCTGCCATCCAGGAGTATGACA...GCAACGCCCGCACAGAATCCGCCAAATCCACACCCCTGCACAAACTTCGCGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp TTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCAGGTCAGATGCTGAATaGGCGTCTGGCAAAAGTGGG +
Preference number: 2 (lower is better)
Translates to: FGLFQLSLSQAGPQTLGPRSDAE*ASGKSG
Trigger: CCCACTTTTGCCAGACGCTCATTCAGCATCTGACCT...GGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp GCAATGTTGTCATACTCCTGGATGGCAGCCCGCAGGTATCGGTCATCATCAGGCGGTCATCATCAGGCTTaGCAGCTGCTGGCTCACGCC +
Preference number: 2 (lower is better)
Translates to: AMLSYSWMAARRYRSSSGGHHQA*QLLAHA
Trigger: GGCGTGAGCCAGCAGCTGTCAAGCCTGATGATGACC...GCCTGATGATGACCGATACCTGCGGGCTGCCATCCAGGAGTATGACAACATTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp CCGAGGACAACCGCAGCCACTGTGACTACATGGAATCTACCAAGATGTAATGGGGCCTCCTGGTCCCGATaGAGGGAGGGGAGCATTGCC +
Preference number: 2 (lower is better)
Translates to: PRTTAATVTTWNLPRCNGASWSR*REGSIA
Trigger: GGCAATGCTCCCCTCCCTGCATCGGGACCAGGAGGC...CCCATTACATCTTGGTAGATTCCATGTAGTCACAGTGGCTGCGGTTGTCCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR GCA 90 bp ATGTTGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCGCGCACACGGTCGGGGACTTGGATCACCACCTaGACTGAATTTTCGCGACGG +
Preference number: 2 (lower is better)
Translates to: MLESRWMNSSSKPRTRSGTWITT*TEFSRR
Trigger: CCGTCGCGAAAATTCAGTGCAGGTGGTGATCCAAGT...CCCCGACCGTGTGCGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp GCAATGTTGTCATACTCCTGGATGGCAGCCCGCAGGTATCGGTCATCATCAGGCCGTGTCGTTGTGGCCTaGCAGGTCTCGGGCCACAAT +
Preference number: 2 (lower is better)
Translates to: AMLSYSWMAARRYRSSSGRVVVA*QVSGHN
Trigger: ATTGTGGCCCGAGACCTGGCAGGCCACAACGACACG...GCCTGATGATGACCGATACCTGCGGGCTGCCATCCAGGAGTATGACAACATTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTCTTCTGTTTATAAGCTaGGCACACATTTGGGAAGCC +
Preference number: 2 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLLLFIS*AHIWEA
Trigger: GGCTTCCCAAATGTGTGCCCAGCTTATAAACAGAAG...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR CCA 90 bp CCGAGGACAACCGCAGCCACTGTGACTACATGGAATCTACCAAGATGTAATGGGTGGCAGCCGTCTTGGTaGCCCCTCTTCAGGGCACCC +
Preference number: 2 (lower is better)
Translates to: PRTTAATVTTWNLPRCNGWQPSW*PLFRAP
Trigger: GGGTGCCCTGAAGAGGGGCCACCAAGACGGCTGCCA...CCCATTACATCTTGGTAGATTCCATGTAGTCACAGTGGCTGCGGTTGTCCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR CCA 90 bp TCCACAAACATGCCCCCACATCCCCCTAGGTCTACCTGTAGATCCTCCTGCTTCGGTCATCTGGGCCTTTaGCCTGAGGCTCCACAGGGT +
Preference number: 2 (lower is better)
Translates to: STNMPPHPPRSTCRSSCFGHLGL*PEAPQG
Trigger: ACCCTGTGGAGCCTCAGGCCAAAGGCCCAGATGACC...GAAGCAGGAGGATCTACAGGTAGACCTAGGGGGATGTGGGGGCATGTTTGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR-3UTR CCA 90 bp ACGGTCGGGGATCTCGTTAATGACGATCTTGACGCGCTGGTCGTCCCTCAGGATCTCGTAGGACTGCAGTaGCCGCTGTGTGGTCACCAA +
Preference number: 2 (lower is better)
Translates to: TVGDLVNDDLDALVVPQDLVGLQ*PLCGHQ
Trigger: TTGGTGACCACACAGCGGCCACTGCAGTCCTACGAG...ATCCTGAGGGACGACCAGCGCGTCAAGATCGTCATTAACGAGATCCCCGACCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp CGTCGCGAAGTTTGTGCAGGGGTGTGGATTTGGCGGATTCTGTGCGGGCGTTGCCCAGCCACACAGGGTTaGCTCCATCAAAGGAGTACT +
Preference number: 2 (lower is better)
Translates to: RREVCAGVWIWRILCGRCPATQG*LHQRST
Trigger: AGTACTCCTTTGATGGAGCCAACCCTGTGTGGCTGG...GCAACGCCCGCACAGAATCCGCCAAATCCACACCCCTGCACAAACTTCGCGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CAA 90 bp GTGGGGTCCCAAGTCCTGCCCACACTAGGGATGCTATCTGTGGTTTaGGTGAGTGCTTTGCTGATGACCCGTCAAAGCAGTCCCACCCCA +
Preference number: 2 (lower is better)
Translates to: VGSQVLPTLGMLSVV*VSALLMTRQSSPTP
Trigger: TGGGGTGGGACTGCTTTGACGGGTCATCAGCAAAGCACTCACCAAAACCACAGATAGCATCCCTAGTGTGGGCAGGACTTGGGACCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR TCA 90 bp CTGGTCAGTGGCCATCATGGTGATGACCGAGGTGCCCGCCGGCTCATTCTCATAGAGTGCAAAGTTGCCTaGGTCAGCATCAGTGGCAGT +
Preference number: 2 (lower is better)
Translates to: LVSGHHGDDRGARRLILIECKVA*VSISGS
Trigger: ACTGCCACTGATGCTGACTCAGGCAACTTTGCACTC...TATGAGAATGAGCCGGCGGGCACCTCGGTCATCACCATGATGGCCACTGACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp CCAGCTGCGATTGCTGGAGGCCTTGACGATGAAGGAGAAGATGGCTTCTCGCTCGCCAGGGCCCTCAAGTaGGTAGGTCAACTCTCCATT +
Preference number: 2 (lower is better)
Translates to: PAAIAGGLDDEGEDGFSLARALK*VGQLSI
Trigger: AATGGAGAGTTGACCTACTCACTTGAGGGCCCTGGC...GAGCGAGAAGCCATCTTCTCCTTCATCGTCAAGGCCTCCAGCAATCGCAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp GATTGGCCCCTCACGAATGATCTGGCCCAGCTTGGCAATGTTGTCATACTCCTGTGGAGAGCAGGTGGATaGACTCCTCCTCGAAGCCGC +
Preference number: 2 (lower is better)
Translates to: DWPLTNDLAQLGNVVILLWRAGG*TPPRSR
Trigger: GCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCA...CAGGAGTATGACAACATTGCCAAGCTGGGCCAGATCATTCGTGAGGGGCCAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp CAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGCGCTGGGCCTCCCTTaGGCCTGCTTAGCCGGAGGG +
Preference number: 2 (lower is better)
Translates to: QNRREHQSLLFISWAHIWALGLP*ACLAGG
Trigger: CCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGC...CCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR GCA 90 bp CCCTCGCCTTTCTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACTAACTGTGGCTTATaGTTCACACACACCCACTCT +
Preference number: 2 (lower is better)
Translates to: PSPFSQLPSLPGPLQRQLTNCGL*FTHTHS
Trigger: AGAGTGGGTGTGTGTGAAGCATAAGCCACAGTTAGT...CAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAGAAAGGCGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR GCA 90 bp CCGAGGACAACCGCAGCCACTGTGACTACATGGAATCTACCAAGATGTAATGGGCCGAAGCTCCTTGCATaGCCAGGCCAGCGCCCTTTC +
Preference number: 2 (lower is better)
Translates to: PRTTAATVTTWNLPRCNGPKLLA*PGQRPF
Trigger: GAAAGGGCGCTGGCCTGGGCATGCAAGGAGCTTCGG...CCCATTACATCTTGGTAGATTCCATGTAGTCACAGTGGCTGCGGTTGTCCTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR-3UTR GCA 90 bp CCACCTGCACTGAATTTTCGCGACGGTTGCTGGCTACATCCCCAGGGTTGTCTTTGGGGAGAGGGCGGCTaGATTCAGTCTGCAAAGGCT +
Preference number: 2 (lower is better)
Translates to: PPALNFRDGCWLHPQGCLWGEGG*IQSAKA
Trigger: AGCCTTTGCAGACTGAATGCAGCCGCCCTCTCCCCA...AAGACAACCCTGGGGATGTAGCCAGCAACCGTCGCGAAAATTCAGTGCAGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp CCGGTCCAGAGAAGACAGCACATAGATGTCACCCGTGGTGGGGTTGATGGCAAAGTCAGGGTCCACGGCTaGCACAGCAATGAGTGTGGT +
Preference number: 2 (lower is better)
Translates to: PVQRRQHIDVTRGGVDGKVRVHG*HSNECG
Trigger: ACCACACTCATTGCTGTGGCAGCCGTGGACCCTGAC...TTTGCCATCAACCCCACCACGGGTGACATCTATGTGCTGTCTTCTCTGGACCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp GATTGGCCCCTCACGAATGATCTGGCCCAGCTTGGCAATGTTGTCATACTCCTGACTCCCAGTCCCGGTTaGCCGCAGTCTTCAGGAAGC +
Preference number: 2 (lower is better)
Translates to: DWPLTNDLAQLGNVVILLTPSPG*PQSSGS
Trigger: GCTTCCTGAAGACTGCGGGCAACCGGGACTGGGAGT...CAGGAGTATGACAACATTGCCAAGCTGGGCCAGATCATTCGTGAGGGGCCAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp TGGATAAGCAGTTCTGTCTGCGCAAAGTTCACCCGGCCCTTCTTGTCCACATGGACCATTACAGATCCCTaGGCCGCCTCCTCCTCCTCC +
Preference number: 2 (lower is better)
Translates to: WISSSVCAKFTRPFLSTWTITDP*AASSSS
Trigger: GGAGGAGGAGGAGGCGGCCCAGGGATCTGTAATGGT...CCATGTGGACAAGAAGGGCCGGGTGAACTTTGCGCAGACAGAACTGCTTATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp ACGATGATCGCCATCTGCAGGGCAGACATGTCATCCGGCAGCCGGACAGAGATGAGTCAGCTTGGCATTTaGCACACTGACAGAGCGCTC +
Preference number: 2 (lower is better)
Translates to: TMIAICRADMSSGSRTEMSQLGI*HTDRAL
Trigger: GAGCGCTCTGTCAGTGTGCCAAATGCCAAGCTGACT...CATCTCTGTCCGGCTGCCGGATGACATGTCTGCCCTGCAGATGGCGATCATCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp ATGTTGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCGCGCACACGGTCGGGGTTGACATCCAGCACTTaGATCACCACCTGCACTGAA +
Preference number: 2 (lower is better)
Translates to: MLESRWMNSSSKPRTRSGLTSST*ITTCTE
Trigger: TTCAGTGCAGGTGGTGATCCAAGTGCTGGATGTCAA...CCCCGACCGTGTGCGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp CCAGCTGCGATTGCTGGAGGCCTTGACGATGAAGGAGAAGATGGCTTCTCGCTCACGCTTGTGCTGAACTaGGGCTTGGAGAACTGTGGC +
Preference number: 2 (lower is better)
Translates to: PAAIAGGLDDEGEDGFSLTLVLN*GLENCG
Trigger: GCCACAGTTCTCCAAGCCCCAGTTCAGCACAAGCGT...GAGCGAGAAGCCATCTTCTCCTTCATCGTCAAGGCCTCCAGCAATCGCAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp ACGATGATCGCCATCTGCAGGGCAGACATGTCATCCGGCAGCCGGACAGAGATGTTGGGACCTTCATCCTaGTCAGTGGCCATCATGGTG +
Preference number: 2 (lower is better)
Translates to: TMIAICRADMSSGSRTEMLGPSS*SVAIMV
Trigger: CACCATGATGGCCACTGACCAGGATGAAGGTCCCAA...CATCTCTGTCCGGCTGCCGGATGACATGTCTGCCCTGCAGATGGCGATCATCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp GGCCACAATGTCCACCACGAAGTAGCCGGGGCTGTAGGCCATGAAGAGGTCGAAATCTCCTCTCTGATGTaGAGGATGGTGCCGTTGGGT +
Preference number: 2 (lower is better)
Translates to: GHNVHHEVAGAVGHEEVEISSLM*RMVPLG
Trigger: ACCCAACGGCACCATCCTCCACATCAGAGAGGAGAT...TTCGACCTCTTCATGGCCTACAGCCCCGGCTACTTCGTGGTGGACATTGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CAA 90 bp GTCCTGCCCACACTAGGGATGCTATCTGTGGTTTTGGTGAGTGCTTaGCTGATGACCCGTCAAAGCAGTCCCACCCCAGGATGGGCTTCT +
Preference number: 2 (lower is better)
Translates to: VLPTLGMLSVVLVSA*LMTRQSSPTPGWAS
Trigger: AGAAGCCCATCCTGGGGTGGGACTGCTTTGACGGGTCATCAGCAAAGCACTCACCAAAACCACAGATAGCATCCCTAGTGTGGGCAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CAA 90 bp GTCTGTATCAGCTTGATTGGCCCCTCACGAATGATCTGGCCCAGCTaGGCAATGTTGTCATACTCCTGGATGGCAGCCCGCAGGTATCGG +
Preference number: 2 (lower is better)
Translates to: VCISLIGPSRMIWPS*AMLSYSWMAARRYR
Trigger: CCGATACCTGCGGGCTGCCATCCAGGAGTATGACAACATTGCCAAGCTGGGCCAGATCATTCGTGAGGGGCCAATCAAGCTGATACAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647092.1
3UTR CAA 90 bp CCCTTGATTGGCCCCTCACGAATGATCTGGCCCAGCTTGGCAATGTaGTCATACTCCTGGATGGCAGCCCGCAGGTATCGGTCATCATCA +
Preference number: 2 (lower is better)
Translates to: PLIGPSRMIWPSLAM*SYSWMAARRYRSSS
Trigger: TGATGATGACCGATACCTGCGGGCTGCCATCCAGGAGTATGACAACATTGCCAAGCTGGGCCAGATCATTCGTGAGGGGCCAATCAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR-3UTR TCA 90 bp TGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCACCTGGACGGCAAAAGTGGGATCTaGGCAGCTGATGCGGGCTGC +
Preference number: 2 (lower is better)
Translates to: CSLTLTFLSTWGCHLHLDGKSGI*AADAGC
Trigger: GCAGCCCGCATCAGCTGCTCAGATCCCACTTTTGCC...GTCCAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR TCA 90 bp AGGACCCAACTAAACACACCCGTGGGCCCCCAGTTTGCAGCTTTGGTATTAGATAACAGGAAGAGGGCCTaGGCTTGGGCCCAGCTCCAT +
Preference number: 2 (lower is better)
Translates to: RTQLNTPVGPQFAALVLDNRKRA*AWAQLH
Trigger: ATGGAGCTGGGCCCAAGCTCAGGCCCTCTTCCTGTT...ATCTAATACCAAAGCTGCAAACTGGGGGCCCACGGGTGTGTTTAGTTGGGTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR-3UTR TCA 90 bp CCAGCTGCGATTGCTGGAGGCCTTGACGATGAAGGAGAAGATGGCTTCTCGCTCCATACACGCTTGTGCTaGACTGGGGCTTGGAGAACT +
Preference number: 2 (lower is better)
Translates to: PAAIAGGLDDEGEDGFSLHTRLC*TGAWRT
Trigger: AGTTCTCCAAGCCCCAGTTCAGCACAAGCGTGTATG...GAGCGAGAAGCCATCTTCTCCTTCATCGTCAAGGCCTCCAGCAATCGCAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp AGCACTTGGATCACCACCTGCACTGAATTTTCGCGACGGTTGCTGGCTACATCCGGAGAGCTCAGGGGCTaGGGCTCTGGCAAGAAGAAA +
Preference number: 2 (lower is better)
Translates to: STWITTCTEFSRRLLATSGELRG*GSGKKK
Trigger: TTTCTTCTTGCCAGAGCCTCAGCCCCTGAGCTCTCC...GGATGTAGCCAGCAACCGTCGCGAAAATTCAGTGCAGGTGGTGATCCAAGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR-3UTR GCA 90 bp TCAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGACCGGCCCTGTCCCTaGCCTTGCTCCCTGGGAGGG +
Preference number: 2 (lower is better)
Translates to: SKPEGTSVTSVYKLGTHLDRPCP*PCSLGG
Trigger: CCCTCCCAGGGAGCAAGGGCAGGGACAGGGCCGGTC...CAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR GCA 90 bp GTAGGCCATGAAGAGGTCGAAGGTGCGCAGAATGCCGTCCATGCTCCCCATGGTACTTGGATCACCACCTaGACTGAATTTTCGCGACGG +
Preference number: 2 (lower is better)
Translates to: VGHEEVEGAQNAVHAPHGTWITT*TEFSRR
Trigger: CCGTCGCGAAAATTCAGTGCAGGTGGTGATCCAAGT...ACCATGGGGAGCATGGACGGCATTCTGCGCACCTTCGACCTCTTCATGGCCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp AGATCTTATGAAGGTAGAGGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGACCTGCCCTTGCTCCCTaGGAGGGGACGGTGGATGGG +
Preference number: 2 (lower is better)
Translates to: RSYEGRGQMLNERLAKVGPALAP*EGTVDG
Trigger: CCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGG...TCCCACTTTTGCCAGACGCTCATTCAGCATCTGACCTCTACCTTCATAAGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp AAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGGGGATGTCCGCGCTaGGCCTCCCTTGCGCCTGCT +
Preference number: 2 (lower is better)
Translates to: KPEGTSVTSVYKLGTHLGRGCPR*ASLAPA
Trigger: AGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCT...TCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR CCA 90 bp GGGCCCAGCCAGTGCTCTCCAGGTGGCCCTGCTCATCTGTACCCTCTGGTCATGAAAGGAACATTCTCTTaGCAGCATGGGTCCTTTTTG +
Preference number: 2 (lower is better)
Translates to: GPSQCSPGGPAHLYPLVMKGTFS*QHGSFL
Trigger: CAAAAAGGACCCATGCTGCCAAGAGAATGTTCCTTT...CATGACCAGAGGGTACAGATGAGCAGGGCCACCTGGAGAGCACTGGCTGGGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR CCA 90 bp AGGACCCAACTAAACACACCCGTGGGCCCCCAGTTTGCAGCTTTGGTATTAGATTCTTGGCAGCCGTCTTaGTGGCCCCTCTTCAGGGCA +
Preference number: 2 (lower is better)
Translates to: RTQLNTPVGPQFAALVLDSWQPS*WPLFRA
Trigger: TGCCCTGAAGAGGGGCCACCAAGACGGCTGCCAAGA...ATCTAATACCAAAGCTGCAAACTGGGGGCCCACGGGTGTGTTTAGTTGGGTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR CCA 90 bp CCGAGGACAACCGCAGCCACTGTGACTACATGGAATCTACCAAGATGTAATGGGGCACTCGTGGTCATCTaGGCCTTTGGCCTGAGGCTC +
Preference number: 2 (lower is better)
Translates to: PRTTAATVTTWNLPRCNGALVVI*AFGLRL
Trigger: GAGCCTCAGGCCAAAGGCCCAGATGACCACGAGTGC...CCCATTACATCTTGGTAGATTCCATGTAGTCACAGTGGCTGCGGTTGTCCTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR-3UTR CCA 90 bp AGGACCCAACTAAACACACCCGTGGGCCCCCAGTTTGCAGCTTTGGTATTAGATGCCCTCTTGTCTGCATaGCAGATGGGCACAGGGTGG +
Preference number: 2 (lower is better)
Translates to: RTQLNTPVGPQFAALVLDALLSA*QMGTGW
Trigger: CCACCCTGTGCCCATCTGCCATGCAGACAAGAGGGC...ATCTAATACCAAAGCTGCAAACTGGGGGCCCACGGGTGTGTTTAGTTGGGTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR-3UTR CCA 90 bp CTCATCGATCATCTGGATCACCCGGTCCACGTCCAGGATGCGGTTGGTATCGCGCCAAAGGGCTTGAACTaGGGCGTATTGTCATTGACG +
Preference number: 2 (lower is better)
Translates to: LIDHLDHPVHVQDAVGIAPKGLN*GVLSLT
Trigger: CGTCAATGACAATACGCCCCAGTTCAAGCCCTTTGG...CGCGATACCAACCGCATCCTGGACGTGGACCGGGTGATCCAGATGATCGATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp ACGGTCGGGGATCTCGTTAATGACGATCTTGACGCGCTGGTCGTCCCTCAGGATTTCTCATCGATCATCTaGATCACCCGGTCCACGTCC +
Preference number: 2 (lower is better)
Translates to: TVGDLVNDDLDALVVPQDFSSII*ITRSTS
Trigger: GGACGTGGACCGGGTGATCCAGATGATCGATGAGAA...ATCCTGAGGGACGACCAGCGCGTCAAGATCGTCATTAACGAGATCCCCGACCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CAA 90 bp CAAAGCAGTCCCACCCCAGGATGGGCTTCTCAGAATCCCAAACCCTaGACCTCTCCTCACAACGCGAGGGTTAAACACTTTGGTCAGGTC +
Preference number: 2 (lower is better)
Translates to: QSSPTPGWASQNPKP*TSPHNARVKHFGQV
Trigger: GACCTGACCAAAGTGTTTAACCCTCGCGTTGTGAGGAGAGGTCAAGGGTTTGGGATTCTGAGAAGCCCATCCTGGGGTGGGACTGCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CAA 90 bp ACATGGAACTGCACATTGTCAGTATTGACAATGGCCCCAGTGATGTaGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCGCGCACACGG +
Preference number: 2 (lower is better)
Translates to: TWNCTLSVLTMAPVM*ESRWMNSSSKPRTR
Trigger: CCGTGTGCGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAACATCACTGGGGCCATTGTCAATACTGACAATGTGCAGTTCCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CAA 90 bp AGCTTGATTGGCCCCTCACGAATGATCTGGCCCAGCTTGGCAATGTaGTCATACTCCTGGATGGCAGCCCGCAGGTATCGGTCATCATCA +
Preference number: 2 (lower is better)
Translates to: SLIGPSRMIWPSLAM*SYSWMAARRYRSSS
Trigger: TGATGATGACCGATACCTGCGGGCTGCCATCCAGGAGTATGACAACATTGCCAAGCTGGGCCAGATCATTCGTGAGGGGCCAATCAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647092.1
3UTR-3UTR TCA 90 bp TGGGAATTCTCAACAGGTCCCCAAGGAAGGATGAGGCCACATTCCTCCAAGTCAGGAGCCAGTCCAGAGTaGTCCAGCTGCAAAGCCCTT +
Preference number: 2 (lower is better)
Translates to: WEFSTGPQGRMRPHSSKSGASPE*SSCKAL
Trigger: AAGGGCTTTGCAGCTGGATCACTCTGGACTGGCTCC...TGACTTGGAGGAATGTGGCCTCATCCTTCCTTGGGGACCTGTTGAGAATTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
3UTR-3UTR TCA 90 bp TCTGCCTTTGAGCTTCTGTCTTGTTGCTGTTGCAGGAGCCATGAGCACAGAGGGCACAAGCTGAGGCCCTaGTCGAGAGAACCCTCTACT +
Preference number: 2 (lower is better)
Translates to: SAFELLSCCCCRSHEHRGHKLRP*SREPST
Trigger: AGTAGAGGGTTCTCTCGATCAGGGCCTCAGCTTGTG...CCCTCTGTGCTCATGGCTCCTGCAACAGCAACAAGACAGAAGCTCAAAGGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR TCA 90 bp TGGAACTGCACATTGTCAGTATTGACAATGGCCCCAGTGATGTTGGAGAGCAGGCTGTCCGGTTGGCAATaGCCTTCCCTGCCGAGGAGT +
Preference number: 2 (lower is better)
Translates to: WNCTLSVLTMAPVMLESRLSGWQ*PSLPRS
Trigger: ACTCCTCGGCAGGGAAGGTCATTGCCAACCGGACAG...CCTGCTCTCCAACATCACTGGGGCCATTGTCAATACTGACAATGTGCAGTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp CTCCTGGCTCCTCGTCCAGCTCAGTCTGTATCAGCTCAGAGATGGAGGAGTGGCCAAGGCTGTACTCAATaGGTGCAAAGTTGCCTGAGT +
Preference number: 2 (lower is better)
Translates to: LLAPRPAQSVSAQRWRSGQGCTQ*VQSCLS
Trigger: ACTCAGGCAACTTTGCACTCATTGAGTACAGCCTTG...GCCACTCCTCCATCTCTGAGCTGATACAGACTGAGCTGGACGAGGAGCCAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR-3UTR GCA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGTGAAATGGAGAGAATaGTTGTTCATTGACATTGAC +
Preference number: 2 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLVKWRE*LFIDID
Trigger: GTCAATGTCAATGAACAAGCATTCTCTCCATTTCAC...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR GCA 90 bp CCCAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCAAGAGGAGAGTGCTGTaGACACAGAAGGAGCTCAAC +
Preference number: 2 (lower is better)
Translates to: PSLSSSWDYRYLTPHLAIKRRVL*TQKELN
Trigger: GTTGAGCTCCTTCTGTGTGCACAGCACTCTCCTCTT...GATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
3UTR-3UTR GCA 90 bp AGGATGGGCTTCTCAGAATCCCAAACCCTTGACCTCTCCTCACAACGCGAGGGTGGGAGAACTCAGGGCTaGCCTATATTAACTCGCTGG +
Preference number: 2 (lower is better)
Translates to: RMGFSESQTLDLSSQREGGRTQG*PILTRW
Trigger: CCAGCGAGTTAATATAGGGCAGCCCTGAGTTCTCCC...ACCCTCGCGTTGTGAGGAGAGGTCAAGGGTTTGGGATTCTGAGAAGCCCATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR GCA 90 bp CTCCTGGCTCCTCGTCCAGCTCAGTCTGTATCAGCTCAGAGATGGAGGAGTGGCAGTGGATGGCCAGAATaGTGTAGAAGACAAGGCTGT +
Preference number: 2 (lower is better)
Translates to: LLAPRPAQSVSAQRWRSGSGWPE*CRRQGC
Trigger: ACAGCCTTGTCTTCTACAGCATTCTGGCCATCCACT...GCCACTCCTCCATCTCTGAGCTGATACAGACTGAGCTGGACGAGGAGCCAGGAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR-3UTR GCA 90 bp GGGGGTCTCCATGATCACGTCGCGAAGTTTGTGCAGGGGTGTGGATTTGGCGGAAGTGGATGGCCAGAATaGTGTAGAAGACAAGGCTGT +
Preference number: 2 (lower is better)
Translates to: GGLHDHVAKFVQGCGFGGSGWPE*CRRQGC
Trigger: ACAGCCTTGTCTTCTACAGCATTCTGGCCATCCACT...TCCGCCAAATCCACACCCCTGCACAAACTTCGCGACGTGATCATGGAGACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp CCGAGGACAACCGCAGCCACTGTGACTACATGGAATCTACCAAGATGTAATGGGGCCAAGACACTGTCCTaGCATCTGTGCTGGCCCAGT +
Preference number: 2 (lower is better)
Translates to: PRTTAATVTTWNLPRCNGAKTLS*HLCWPS
Trigger: ACTGGGCCAGCACAGATGCCAGGACAGTGTCTTGGC...CCCATTACATCTTGGTAGATTCCATGTAGTCACAGTGGCTGCGGTTGTCCTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR CCA 90 bp CGACAGAAGGGATCCAGCCACACAGGGTTGGCTCCATCAAAGGAGTACTTGTTGTTTCGCGACGGTTGCTaGCTACATCCCCAGGGTTGT +
Preference number: 2 (lower is better)
Translates to: RQKGSSHTGLAPSKEYLLFRDGC*LHPQGC
Trigger: ACAACCCTGGGGATGTAGCCAGCAACCGTCGCGAAA...CAACAAGTACTCCTTTGATGGAGCCAACCCTGTGTGGCTGGATCCCTTCTGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp CGACAGAAGGGATCCAGCCACACAGGGTTGGCTCCATCAAAGGAGTACTTGTTGGTGAAGCGTGGTGGCTaGTCGTTGATGTCCTCTAGC +
Preference number: 2 (lower is better)
Translates to: RQKGSSHTGLAPSKEYLLVKRGG*SLMSSS
Trigger: GCTAGAGGACATCAACGACCAGCCACCACGCTTCAC...CAACAAGTACTCCTTTGATGGAGCCAACCCTGTGTGGCTGGATCCCTTCTGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp CGACAGAAGGGATCCAGCCACACAGGGTTGGCTCCATCAAAGGAGTACTTGTTGCTTGGTGAAGCGTGGTaGCTGGTCGTTGATGTCCTC +
Preference number: 2 (lower is better)
Translates to: RQKGSSHTGLAPSKEYLLLGEAW*LVVDVL
Trigger: GAGGACATCAACGACCAGCCACCACGCTTCACCAAG...CAACAAGTACTCCTTTGATGGAGCCAACCCTGTGTGGCTGGATCCCTTCTGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CAA 90 bp AGCTTGGGAGCTTGCAGAGAGCCAGACATTGTCCAGCCCCTCACTTaGACTCCCCAGTTCTGTGCACAGAAGTATGAGGCTTCTGTGTAC +
Preference number: 2 (lower is better)
Translates to: SLGACREPDIVQPLT*TPQFCAQKYEASVY
Trigger: GTACACAGAAGCCTCATACTTCTGTGCACAGAACTGGGGAGTCAAAGTGAGGGGCTGGACAATGTCTGGCTCTCTGCAAGCTCCCAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CAA 90 bp TCCTCAGAAGAGCACCTTCCTCTCTGCAGACCCCCTCGCTGCTGCTaGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCATCT +
Preference number: 2 (lower is better)
Translates to: SSEEHLPLCRPPRCC*MKDFWSRDVHSWSS
Trigger: AGATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCTGCAGAGAGGAAGGTGCTCTTCTGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR-3UTR TCA 90 bp CCGAGGACAACCGCAGCCACTGTGACTACATGGAATCTACCAAGATGTAATGGGCAAGTCCTCACAAGCTaGGGCCCTGATCGAGAGAAC +
Preference number: 2 (lower is better)
Translates to: PRTTAATVTTWNLPRCNGQVLTS*GPDREN
Trigger: GTTCTCTCGATCAGGGCCTCAGCTTGTGAGGACTTG...CCCATTACATCTTGGTAGATTCCATGTAGTCACAGTGGCTGCGGTTGTCCTCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR TCA 90 bp CGACAGAAGGGATCCAGCCACACAGGGTTGGCTCCATCAAAGGAGTACTTGTTGCATACACGCTTGTGCTaGACTGGGGCTTGGAGAACT +
Preference number: 2 (lower is better)
Translates to: RQKGSSHTGLAPSKEYLLHTRLC*TGAWRT
Trigger: AGTTCTCCAAGCCCCAGTTCAGCACAAGCGTGTATG...CAACAAGTACTCCTTTGATGGAGCCAACCCTGTGTGGCTGGATCCCTTCTGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp AGATCTTATGAAGGTAGAGGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGAGGGACGGTGGATGGGTaGTGCTCACACCCACAAGGC +
Preference number: 2 (lower is better)
Translates to: RSYEGRGQMLNERLAKVGGTVDG*CSHPQG
Trigger: GCCTTGTGGGTGTGAGCAGCACCCATCCACCGTCCC...TCCCACTTTTGCCAGACGCTCATTCAGCATCTGACCTCTACCTTCATAAGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp TGGAACTGCACATTGTCAGTATTGACAATGGCCCCAGTGATGTTGGAGAGCAGGTGGGGAGAGGGCGGCTaGATTCAGTCTGCAAAGGCT +
Preference number: 2 (lower is better)
Translates to: WNCTLSVLTMAPVMLESRWGEGG*IQSAKA
Trigger: AGCCTTTGCAGACTGAATGCAGCCGCCCTCTCCCCA...CCTGCTCTCCAACATCACTGGGGCCATTGTCAATACTGACAATGTGCAGTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp TGGAACTGCACATTGTCAGTATTGACAATGGCCCCAGTGATGTTGGAGAGCAGGCTCATCTGCATCCACTaGGCCTGTCACGTTGCCCAC +
Preference number: 2 (lower is better)
Translates to: WNCTLSVLTMAPVMLESRLICIH*ACHVAH
Trigger: GTGGGCAACGTGACAGGCGCAGTGGATGCAGATGAG...CCTGCTCTCCAACATCACTGGGGCCATTGTCAATACTGACAATGTGCAGTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp CGTCGCGAAGTTTGTGCAGGGGTGTGGATTTGGCGGATTCTGTGCGGGCGTTGCAAAAGATTCCGTAGCTaGTCCTTGTTCTCATCGATC +
Preference number: 2 (lower is better)
Translates to: RREVCAGVWIWRILCGRCKRFRS*SLFSSI
Trigger: GATCGATGAGAACAAGGAGCAGCTACGGAATCTTTT...GCAACGCCCGCACAGAATCCGCCAAATCCACACCCCTGCACAAACTTCGCGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp AGATCTTATGAAGGTAGAGGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGAGGAGGGGACGGTGGATaGGTGCTGCTCACACCCACA +
Preference number: 2 (lower is better)
Translates to: RSYEGRGQMLNERLAKVGGGDGG*VLLTPT
Trigger: TGTGGGTGTGAGCAGCACCCATCCACCGTCCCCTCC...TCCCACTTTTGCCAGACGCTCATTCAGCATCTGACCTCTACCTTCATAAGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp AGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGCCAGTCAGCCTGAGCCAAGCTaGTCCCCAGACTCTTGGGCC +
Preference number: 2 (lower is better)
Translates to: REHQSLLFISWAHIWEASQPEPS*SPDSWA
Trigger: GGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTG...ACTGGCTTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR CCA 90 bp TGGTCGTTGATGTCCTCTAGCACAACGCGCACCTCCTGCAGTGTGAGGTCAGCATTGACATCCAGCACTTaGATCACCACCTGCACTGAA +
Preference number: 2 (lower is better)
Translates to: WSLMSSSTTRTSCSVRSALTSST*ITTCTE
Trigger: TTCAGTGCAGGTGGTGATCCAAGTGCTGGATGTCAA...TGCTGACCTCACACTGCAGGAGGTGCGCGTTGTGCTAGAGGACATCAACGACCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp GTGGATAAGCAGTTCTGTCTGCGCAAAGTTCACCCGGCCCTTCTTGTCCACATGATCTCCTCTCTGATGTaGAGGATGGTGCCGTTGGGT +
Preference number: 2 (lower is better)
Translates to: VDKQFCLRKVHPALLVHMISSLM*RMVPLG
Trigger: ACCCAACGGCACCATCCTCCACATCAGAGAGGAGAT...CATGTGGACAAGAAGGGCCGGGTGAACTTTGCGCAGACAGAACTGCTTATCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp CGACAGAAGGGATCCAGCCACACAGGGTTGGCTCCATCAAAGGAGTACTTGTTGTCGCGGTTCACCACGTaGATAAGCAGTTCTGTCTGC +
Preference number: 2 (lower is better)
Translates to: RQKGSSHTGLAPSKEYLLSRFTT*ISSSVC
Trigger: GCAGACAGAACTGCTTATCCACGTGGTGAACCGCGA...CAACAAGTACTCCTTTGATGGAGCCAACCCTGTGTGGCTGGATCCCTTCTGTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CAA 90 bp GGCAGCATGGGTCCTTTTTGTCTATGTCTTCTCTTTCCTACCAGCTaGGGAGCTTGCAGAGAGCCAGACATTGTCCAGCCCCTCACTTTG +
Preference number: 2 (lower is better)
Translates to: GSMGPFCLCLLFPTS*GACREPDIVQPLTL
Trigger: CAAAGTGAGGGGCTGGACAATGTCTGGCTCTCTGCAAGCTCCCAAGCTGGTAGGAAAGAGAAGACATAGACAAAAAGGACCCATGCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CAA 90 bp AGTCTGTATCAGCTCAGAGATGGAGGAGTGGCAGGAGGAGGCTTTTaGCACCATCCGCTGTGCAAAGAGCTTTTTGAGCCGCAGGTAATC +
Preference number: 2 (lower is better)
Translates to: SLYQLRDGGVAGGGF*HHPLCKELFEPQVI
Trigger: GATTACCTGCGGCTCAAAAAGCTCTTTGCACAGCGGATGGTGCAAAAAGCCTCCTCCTGCCACTCCTCCATCTCTGAGCTGATACAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR-3UTR TCA 90 bp CATCCACATTCCCTAGGTAAGTCTTCCCTATACCCGCTGCCCTGGGTCCAGCTGCCTTCCAAGTCAATCTaGTCTCAAAAAGTGAGTCCG +
Preference number: 2 (lower is better)
Translates to: HPHSLGKSSLYPLPWVQLPSKSI*SQKVSP
Trigger: CGGACTCACTTTTTGAGATCAGATTGACTTGGAAGG...CAGCTGGACCCAGGGCAGCGGGTATAGGGAAGACTTACCTAGGGAATGTGGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR TCA 90 bp CGACAGAAGGGATCCAGCCACACAGGGTTGGCTCCATCAAAGGAGTACTTGTTGTGTAGTACCAGTTCATaGGGACAAAGAGCATGGCGG +
Preference number: 2 (lower is better)
Translates to: RQKGSSHTGLAPSKEYLLCSTSS*GQRAWR
Trigger: CCGCCATGCTCTTTGTCCTCATGAACTGGTACTACA...CAACAAGTACTCCTTTGATGGAGCCAACCCTGTGTGGCTGGATCCCTTCTGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp TCAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGCAGCTGATGCGGGCTaGCAGGGCCAAGCCAAGGTT +
Preference number: 2 (lower is better)
Translates to: SKPEGTSVTSVYKLGTHLAADAG*QGQAKV
Trigger: AACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGC...CAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR CCA 90 bp TCAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGCTTAGCCGGAGGGGATaGTGCTTGCGGGGTGGAGCT +
Preference number: 2 (lower is better)
Translates to: SKPEGTSVTSVYKLGTHLLSRRG*CLRGGA
Trigger: AGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAG...CAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR CCA 90 bp ATGAGGATTGATTTGAAAATGCGGACAGGCCACCGCCCTCTTGTCTGCATGGCACCAAGCAGGCTCTATTaGAGAAGCCCACTGTCCCTT +
Preference number: 2 (lower is better)
Translates to: MRIDLKMRTGHRPLVCMAPSRLY*RSPLSL
Trigger: AAGGGACAGTGGGCTTCTCCAATAGAGCCTGCTTGG...TGCCATGCAGACAAGAGGGCGGTGGCCTGTCCGCATTTTCAAATCAATCCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR CCA 90 bp GTGGCCATGATGCTGTCCAGTTTAACAGTGCCTTGCCCCCATCCACATTCCCTATGCCAAAGCCCAGCATaGAGAAGTTGCCAAATGGCA +
Preference number: 2 (lower is better)
Translates to: VAMMLSSLTVPCPHPHSLCQSPA*RSCQMA
Trigger: TGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCA...TAGGGAATGTGGATGGGGGCAAGGCACTGTTAAACTGGACAGCATCATGGCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR-3UTR CCA 90 bp CGACAGAAGGGATCCAGCCACACAGGGTTGGCTCCATCAAAGGAGTACTTGTTGCCATCGGGCTGCAGATaGAAGTTCTTCTCTTCGTTG +
Preference number: 2 (lower is better)
Translates to: RQKGSSHTGLAPSKEYLLPSGCR*KFFSSL
Trigger: CAACGAAGAGAAGAACTTCCATCTGCAGCCCGATGG...CAACAAGTACTCCTTTGATGGAGCCAACCCTGTGTGGCTGGATCCCTTCTGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CAA 90 bp CCCAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTaGGCCATCTCAAGGACATTTTATGACAAAGAGGAGAGTGCTGTG +
Preference number: 2 (lower is better)
Translates to: PSLSSSWDYRYLTPH*AISRTFYDKEESAV
Trigger: CACAGCACTCTCCTCTTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
3UTR-3UTR TCA 90 bp TGGAACTGCACATTGTCAGTATTGACAATGGCCCCAGTGATGTTGGAGAGCAGGAGGTCAGATGCTGAATaGGCGTCTGGCAAAAGTGGG +
Preference number: 2 (lower is better)
Translates to: WNCTLSVLTMAPVMLESRRSDAE*ASGKSG
Trigger: CCCACTTTTGCCAGACGCTCATTCAGCATCTGACCT...CCTGCTCTCCAACATCACTGGGGCCATTGTCAATACTGACAATGTGCAGTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp CGACAGAAGGGATCCAGCCACACAGGGTTGGCTCCATCAAAGGAGTACTTGTTGTGGGGTTGTTGTCATTaGTGTCCACGATTTCCAGGT +
Preference number: 2 (lower is better)
Translates to: RQKGSSHTGLAPSKEYLLWGCCH*CPRFPG
Trigger: ACCTGGAAATCGTGGACATCAATGACAACAACCCCA...CAACAAGTACTCCTTTGATGGAGCCAACCCTGTGTGGCTGGATCCCTTCTGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp AGGACCCAACTAAACACACCCGTGGGCCCCCAGTTTGCAGCTTTGGTATTAGATCTGTCTTGTTGCTGTTaGAGGAGCCATGAGCACAGA +
Preference number: 2 (lower is better)
Translates to: RTQLNTPVGPQFAALVLDLSCCC*RSHEHR
Trigger: TCTGTGCTCATGGCTCCTGCAACAGCAACAAGACAG...ATCTAATACCAAAGCTGCAAACTGGGGGCCCACGGGTGTGTTTAGTTGGGTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR-3UTR CCA 90 bp AAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAGGAGGAGGGCCTGTTTaGCCTCTTTCAGCTCAGCCT +
Preference number: 2 (lower is better)
Translates to: KPEGTSVTSVYKLGTHLGGGGPV*PLSAQP
Trigger: AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCC...TCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR CCA 90 bp ATTGATTTGAAAATGCGGACAGGCCACCGCCCTCTTGTCTGCATGGCAGATGGGTTACCAAGAGGACCTTaGAGAAGTCATCCTGAGACG +
Preference number: 2 (lower is better)
Translates to: IDLKMRTGHRPLVCMADGLPRGP*RSHPET
Trigger: CGTCTCAGGATGACTTCTCCAAGGTCCTCTTGGTAA...CCCATCTGCCATGCAGACAAGAGGGCGGTGGCCTGTCCGCATTTTCAAATCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR GCA 90 bp TCAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGACGGTGGATGGGTGCTaGTCACACCCACAAGGCTTC +
Preference number: 2 (lower is better)
Translates to: SKPEGTSVTSVYKLGTHLTVDGC*SHPQGF
Trigger: GAAGCCTTGTGGGTGTGAGCAGCACCCATCCACCGT...CAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR CCA 90 bp GTGGCCATGATGCTGTCCAGTTTAACAGTGCCTTGCCCCCATCCACATTCCCTAGGAGAAGTTGCCAAATaGCAAAGGTTCCCTTTAGTC +
Preference number: 2 (lower is better)
Translates to: VAMMLSSLTVPCPHPHSLGEVAK*QRFPLV
Trigger: GACTAAAGGGAACCTTTGCCATTTGGCAACTTCTCC...TAGGGAATGTGGATGGGGGCAAGGCACTGTTAAACTGGACAGCATCATGGCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR-3UTR CCA 90 bp TGGAACTGCACATTGTCAGTATTGACAATGGCCCCAGTGATGTTGGAGAGCAGGGCTCTGGTAGGTCGCTaGCATTGTCAATCACTGAGA +
Preference number: 2 (lower is better)
Translates to: WNCTLSVLTMAPVMLESRALVGR*HCQSLR
Trigger: TCTCAGTGATTGACAATGCCAGCGACCTACCAGAGC...CCTGCTCTCCAACATCACTGGGGCCATTGTCAATACTGACAATGTGCAGTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp GAATGCTTGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCAGTAGAGGTCAGATGCTaGATGAGCGTCTGGCAAAAG +
Preference number: 2 (lower is better)
Translates to: ECLFIDIDFLVHVGMPPPVEVRC*MSVWQK
Trigger: CTTTTGCCAGACGCTCATTCAGCATCTGACCTCTAC...TGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACAAGCATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR TCA 90 bp CTTAGACTTGTGATGTCTCTGGACCTTGCTGTCTTAACCTGTGATGTGGCCATGTTGGAGAAGTCATCCTaGGACGCTGCATTTCTCCCT +
Preference number: 2 (lower is better)
Translates to: LRLVMSLDLAVLTCDVAMLEKSS*DAAFLP
Trigger: AGGGAGAAATGCAGCGTCTCAGGATGACTTCTCCAA...CATGGCCACATCACAGGTTAAGACAGCAAGGTCCAGAGACATCACAAGTCTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR TCA 90 bp TCTGCCTTTGAGCTTCTGTCTTGTTGCTGTTGCAGGAGCCATGAGCACAGAGGGTCTGATCTCAAAAAGTaGGTCCGGCTTCACAAGAAA +
Preference number: 2 (lower is better)
Translates to: SAFELLSCCCCRSHEHRGSDLKK*VRLHKK
Trigger: TTTCTTGTGAAGCCGGACTCACTTTTTGAGATCAGA...CCCTCTGTGCTCATGGCTCCTGCAACAGCAACAAGACAGAAGCTCAAAGGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR TCA 90 bp TGGAACTGCACATTGTCAGTATTGACAATGGCCCCAGTGATGTTGGAGAGCAGGCAAGGCTGTACTCAATaGGTGCAAAGTTGCCTGAGT +
Preference number: 2 (lower is better)
Translates to: WNCTLSVLTMAPVMLESRQGCTQ*VQSCLS
Trigger: ACTCAGGCAACTTTGCACTCATTGAGTACAGCCTTG...CCTGCTCTCCAACATCACTGGGGCCATTGTCAATACTGACAATGTGCAGTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp TCAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGAGGTCAGATGCTGAATaGGCGTCTGGCAAAAGTGGG +
Preference number: 2 (lower is better)
Translates to: SKPEGTSVTSVYKLGTHLRSDAE*ASGKSG
Trigger: CCCACTTTTGCCAGACGCTCATTCAGCATCTGACCT...CAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR CCA 90 bp CCGAGGACAACCGCAGCCACTGTGACTACATGGAATCTACCAAGATGTAATGGGATTCTCTTGGCAGCATaGGTCCTTTTTGTCTATGTC +
Preference number: 2 (lower is better)
Translates to: PRTTAATVTTWNLPRCNGILLAA*VLFVYV
Trigger: GACATAGACAAAAAGGACCCATGCTGCCAAGAGAAT...CCCATTACATCTTGGTAGATTCCATGTAGTCACAGTGGCTGCGGTTGTCCTCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR GCA 90 bp AACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGTGAAATGGAGAGAATaGTTGTTCATTGACATTGAC +
Preference number: 2 (lower is better)
Translates to: NRREHQSLLFISWAHIWEVKWRE*LFIDID
Trigger: GTCAATGTCAATGAACAAGCATTCTCTCCATTTCAC...TTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR GCA 90 bp TCAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGTGAAATGGAGAGAATaGTTGTTCATTGACATTGAC +
Preference number: 2 (lower is better)
Translates to: SKPEGTSVTSVYKLGTHLVKWRE*LFIDID
Trigger: GTCAATGTCAATGAACAAGCATTCTCTCCATTTCAC...CAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR GCA 72 bp TCCGCCATGGCCGGCCCACCGTCCCTCGACAGCCCCTaGCGGGCCCCGAGGACAACCGCAGCCACTGTGACT +
Preference number: 3 (lower is better)
Translates to: SAMAGPPSLDSP*RAPRTTAATVT
Trigger: AGTCACAGTGGCTGCGGTTGTCCTCGGGGCCCGGCAGGGGCTGTCGAGGGACGGTGGGCCGGCCATGGCGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR GCA 72 bp TCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTaGGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGG +
Preference number: 3 (lower is better)
Translates to: SGQQGMSALGLP*ACLAGGDGACG
Trigger: CCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR CAA 90 bp AAGGCAGTGGCCTCGGCAGCGGTCAGCGTCTCCAGCGAGCGGCCCAGGCCCTTCTCCTCGGGCAGGCTGTaGAGGTCGGTGGCCAGCAGC +
Preference number: 3 (lower is better)
Translates to: KAVASAAVSVSSERPRPFSSGRL*RSVASS
Trigger: GCTGCTGGCCACCGACCTCAACAGCCTGCCCGAGGA...GAAGGGCCTGGGCCGCTCGCTGGAGACGCTGACCGCTGCCGAGGCCACTGCCTT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 72 bp GCCCGCCTCCTGGTCCCGATGCAGGGAGGGGAGCATTaGCAGCCTCCCACGCTTCTGTCCCTCCCAAGCCCG +
Preference number: 3 (lower is better)
Translates to: ARLLVPMQGGEH*QPPTLLSLPSP
Trigger: CGGGCTTGGGAGGGACAGAAGCGTGGGAGGCTGGCAATGCTCCCCTCCCTGCATCGGGACCAGGAGGCGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR GCA 72 bp CTCCTGCTGGCCACCTGTCTGCTGTTCATGACGCTCTaGAAGCCGGCCGCGCTGGACCCGAGCCGCCGCAGG +
Preference number: 3 (lower is better)
Translates to: LLLATCLLFMTL*KPAALDPSRRR
Trigger: CCTGCGGCGGCTCGGGTCCAGCGCGGCCGGCTTGCAGAGCGTCATGAACAGCAGACAGGTGGCCAGCAGGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR CCA 72 bp GCGGTCAGCGTCTCCAGCGAGCGGCCCAGGCCCTTCTaGTCTTCCTCGGGCAGGCTGTTGAGGTCGGTGGCC +
Preference number: 3 (lower is better)
Translates to: AVSVSSERPRPF*SSSGRLLRSVA
Trigger: GGCCACCGACCTCAACAGCCTGCCCGAGGAAGACCAGAAGGGCCTGGGCCGCTCGCTGGAGACGCTGACCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp TGGCGGATTCTGTGCGGGCGTTGCGCTCGAAGGCAGTaGCCTCGGCAGCGGTCAGCGTCTCCAGCGAGCGGC +
Preference number: 3 (lower is better)
Translates to: WRILCGRCARRQ*PRQRSASPASG
Trigger: GCCGCTCGCTGGAGACGCTGACCGCTGCCGAGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATCCGCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp GTGGCCAGCAGCGTGCCCGTGCTGCCGTGCACCACATaGATCCCATCGGGCCCCTTGAGCTCCACTGGTGGC +
Preference number: 3 (lower is better)
Translates to: VASSVPVLPCTT*IPSGPLSSTGG
Trigger: GCCACCAGTGGAGCTCAAGGGGCCCGATGGGATCCATGTGGTGCACGGCAGCACGGGCACGCTGCTGGCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp GACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGGGAGCCCCCCCCCTCGCTGCTGCTaGATGAAAGACTTCTGGTCA +
Preference number: 3 (lower is better)
Translates to: DPSRRRAHECMPHHPGSPPPRCC*MKDFWS
Trigger: TGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGG...GGGGCTCCCAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTC
68% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR GCA 72 bp TCCACTGGTGGCTTGTGGCGGAAGCGCAGGCTACCCTaGCCTGGGCTGTGGTCTCCTGGCTCCTCGTCCAGC +
Preference number: 3 (lower is better)
Translates to: STGGLWRKRRLP*PGLWSPGSSSS
Trigger: GCTGGACGAGGAGCCAGGAGACCACAGCCCAGGGCAGGGTAGCCTGCGCTTCCGCCACAAGCCACCAGTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 72 bp TTGAGGTCGGTGGCCAGCAGCGTGCCCGTGCTGCCGTaGACCACATGGATCCCATCGGGCCCCTTGAGCTCC +
Preference number: 3 (lower is better)
Translates to: LRSVASSVPVLP*TTWIPSGPLSS
Trigger: GGAGCTCAAGGGGCCCGATGGGATCCATGTGGTGCACGGCAGCACGGGCACGCTGCTGGCCACCGACCTCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 72 bp GCAGGGGTGTGGATTTGGCGGATTCTGTGCGGGCGTTaGGCTCGAAGGCAGTGGCCTCGGCAGCGGTCAGCG +
Preference number: 3 (lower is better)
Translates to: AGVWIWRILCGR*ARRQWPRQRSA
Trigger: CGCTGACCGCTGCCGAGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAATCCACACCCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp GCCCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTaGATGGGTGCTGCTCACACCCACAAGGCTTCCCTG +
Preference number: 3 (lower is better)
Translates to: ALSLPLLPGRGR*MGAAHTHKASL
Trigger: CAGGGAAGCCTTGTGGGTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp TTGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCGCGCACACGGTCGGGGATCCGGGGCGGGGACCCGTaGTCTGAGGCCCTCACGGTA +
Preference number: 3 (lower is better)
Translates to: LESRWMNSSSKPRTRSGIRGGDP*SEALTV
Trigger: TACCGTGAGGGCCTCAGACAACGGGTCCCCGCCCCG...GATCCCCGACCGTGTGCGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR TCA 72 bp GCATCTTCCTCCTGCTGGCCACCTGTCTGCTGTTCATaGCGCTCTGCAAGCCGGCCGCGCTGGACCCGAGCC +
Preference number: 3 (lower is better)
Translates to: ASSSCWPPVCCS*RSASRPRWTRA
Trigger: GGCTCGGGTCCAGCGCGGCCGGCTTGCAGAGCGTCATGAACAGCAGACAGGTGGCCAGCAGGAGGAAGATGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR TCA 72 bp GGCCTGCACTCCGGCACTGACAGCACCATTCTGGGCTaGGGCCCCTCCACTTCCTTGAGAGGGCCCAGCCAG +
Preference number: 3 (lower is better)
Translates to: GLHSGTDSTILG*GPSTSLRGPSQ
Trigger: CTGGCTGGGCCCTCTCAAGGAAGTGGAGGGGCCTCAGCCCAGAATGGTGCTGTCAGTGCCGGAGTGCAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR GCA 72 bp CCTGTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGTaGTCAGGCACTGTCAGCAGCTGGTACTGGGGGCTG +
Preference number: 3 (lower is better)
Translates to: PVTLPTRVPRGE*SGTVSSWYWGL
Trigger: CAGCCCCCAGTACCAGCTGCTGACAGTGCCTGAGCACTCACCACGCGGCACCCTCGTGGGCAACGTGACAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 72 bp TGGGGCCCTCATCTGCATCCACTGCGCCTGTCACGTTaGCCACGAGGGTGCCGCGTGGTGAGTGCTCAGGCA +
Preference number: 3 (lower is better)
Translates to: WGPHLHPLRLSR*PRGCRVVSAQA
Trigger: TGCCTGAGCACTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCAGATGAGGGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 72 bp GTACACGATCGCGTTGGGGCCCTCATCTGCATCCACTaGGCCTGTCACGTTGCCCACGAGGGTGCCGCGTGG +
Preference number: 3 (lower is better)
Translates to: VHDRVGALICIH*ACHVAHEGAAW
Trigger: CCACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCAGATGAGGGCCCCAACGCGATCGTGTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp TGGTGGCTTGTGGCGGAAGCGCAGGCTACCCTGCCCTaGGCTGTGGTCTCCTGGCTCCTCGTCCAGCTCAGT +
Preference number: 3 (lower is better)
Translates to: WWLVAEAQATLP*AVVSWLLVQLS
Trigger: ACTGAGCTGGACGAGGAGCCAGGAGACCACAGCCCAGGGCAGGGTAGCCTGCGCTTCCGCCACAAGCCACCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp CACATGGATCCCATCGGGCCCCTTGAGCTCCACTGGTaGCTTGTGGCGGAAGCGCAGGCTACCCTGCCCTGG +
Preference number: 3 (lower is better)
Translates to: HMDPIGPLELHW*LVAEAQATLPW
Trigger: CCAGGGCAGGGTAGCCTGCGCTTCCGCCACAAGCCACCAGTGGAGCTCAAGGGGCCCGATGGGATCCATGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp CACCACATGGATCCCATCGGGCCCCTTGAGCTCCACTaGTGGCTTGTGGCGGAAGCGCAGGCTACCCTGCCC +
Preference number: 3 (lower is better)
Translates to: HHMDPIGPLELH*WLVAEAQATLP
Trigger: GGGCAGGGTAGCCTGCGCTTCCGCCACAAGCCACCAGTGGAGCTCAAGGGGCCCGATGGGATCCATGTGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp CTCGTAGTCCACTGTCCGGTTGGCAATGACCTTCCCTGCCGAGGAGTCCTCCAGCGGGGCGGGGACCCGTaGTCTGAGGCCCTCACGGTA +
Preference number: 3 (lower is better)
Translates to: LVVHCPVGNDLPCRGVLQRGGDP*SEALTV
Trigger: TACCGTGAGGGCCTCAGACAACGGGTCCCCGCCCCG...CTGGAGGACTCCTCGGCAGGGAAGGTCATTGCCAACCGGACAGTGGACTACGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp GCGCCTGTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGTGCTCAGGCACTGTCTGGAGGATGGTGCCGTaGGGTGGGCGCACAAAGACA +
Preference number: 3 (lower is better)
Translates to: APVTLPTRVPRGECSGTVWRMVP*GGRTKT
Trigger: TGTCTTTGTGCGCCCACCCAACGGCACCATCCTCCA...GACAGTGCCTGAGCACTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTTGCAGGGGTGTGGATTaGGCGGATTCTGTGCGGGCG +
Preference number: 3 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPCRGVD*ADSVRA
Trigger: CGCCCGCACAGAATCCGCCAAATCCACACCCCTGCA...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR TCA 72 bp ACAGCACCATTCTGGGCTGAGGCCCCTCCACTTCCTTaGGAGGGCCCAGCCAGTGCTCTCCAGGTGGCCCTG +
Preference number: 3 (lower is better)
Translates to: TAPFWAEAPPLP*EGPASALQVAL
Trigger: CAGGGCCACCTGGAGAGCACTGGCTGGGCCCTCTCAAGGAAGTGGAGGGGCCTCAGCCCAGAATGGTGCTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR TCA 72 bp AGGGATCTCAGCTGCCCGGGGCGGGGACCCGTTGTCTaGGGCCCTCACGGTAAAGTTGAGCCAGTGCACCTC +
Preference number: 3 (lower is better)
Translates to: RDLSCPGRGPVV*GPHGKVEPVHL
Trigger: GAGGTGCACTGGCTCAACTTTACCGTGAGGGCCTCAGACAACGGGTCCCCGCCCCGGGCAGCTGAGATCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 72 bp GACCAGCCCATTAAGGCCCTTGTCAGGGTCCACGGCTaGCACAGCAATGAGTGTGGTCCCAGGGGTGGCCCC +
Preference number: 3 (lower is better)
Translates to: DQPIKALVRVHG*HSNECGPRGGP
Trigger: GGGGCCACCCCTGGGACCACACTCATTGCTGTGGCAGCCGTGGACCCTGACAAGGGCCTTAATGGGCTGGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 72 bp CTGCATCCACTGCGCCTGTCACGTTGCCCACGAGGGTaGCGCGTGGTGAGTGCTCAGGCACTGTCAGCAGCT +
Preference number: 3 (lower is better)
Translates to: LHPLRLSRCPRG*RVVSAQALSAA
Trigger: AGCTGCTGACAGTGCCTGAGCACTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp CTTCCCTGCCGAGGAGTCCTCCAGCTGGACATACCCTaGGGGCACCAGGTCCAGCAGGGTGTAGGTGACCAG +
Preference number: 3 (lower is better)
Translates to: LPCRGVLQLDIP*GHQVQQGVGDQ
Trigger: CTGGTCACCTACACCCTGCTGGACCTGGTGCCCCCAGGGTATGTCCAGCTGGAGGACTCCTCGGCAGGGAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp TGCAGTGTGAGGTCAGCAACCAGGTCGAGGGTTGGGGAGGGTCCACGGGGAGGTAGGGCCAAGCCAAGGTaGTCCCCAAGGCCTGGCCTT +
Preference number: 3 (lower is better)
Translates to: CSVRSATRSRVGEGPRGGRAKPR*SPRPGL
Trigger: AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCT...ACCTCCCCGTGGACCCTCCCCAACCCTCGACCTGGTTGCTGACCTCACACTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGCCCTCACGGTAAAGTaGAGCCAGTGCACCTCCTCG +
Preference number: 3 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPALTVK*SQCTSS
Trigger: CGAGGAGGTGCACTGGCTCAACTTTACCGTGAGGGC...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp GGGGTGTGGATTTGGCGGATTCTGTGCGGGCGTTGCGCTCGAAGGCAGTGGCCTAGCTCCACTGGTGGCTaGTGGCGGAAGCGCAGGCTA +
Preference number: 3 (lower is better)
Translates to: GVWIWRILCGRCARRQWPSSTGG*WRKRRL
Trigger: TAGCCTGCGCTTCCGCCACAAGCCACCAGTGGAGCT...AGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAATCCACACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 72 bp GCGATCTCACTCAGGTTCTCCGGTAGGTCATCCTCATaGTCCGCCTGGGCGGCCAGCTCCAGGTTCCGACAG +
Preference number: 3 (lower is better)
Translates to: AISLRFSGRSSS*SAWAASSRFRQ
Trigger: CTGTCGGAACCTGGAGCTGGCCGCCCAGGCGGAGCATGAGGATGACCTACCGGAGAACCTGAGTGAGATCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp CTCCCTTCAGAGGCCAGGGCGGGTGCTGTGACAGAGTaGCAAGAGGCAGGGCATTTCCAGCAGCTGGAGGTG +
Preference number: 3 (lower is better)
Translates to: LPSEARAGAVTE*QEAGHFQQLEV
Trigger: CACCTCCAGCTGCTGGAAATGCCCTGCCTCTTGCCACTCTGTCACAGCACCCGCCCTGGCCTCTGAAGGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CCA 72 bp CTCAGGTTCTCCGGTAGGTCATCCTCATGCTCCGCCTaGGCGGCCAGCTCCAGGTTCCGACAGAAGGGATCC +
Preference number: 3 (lower is better)
Translates to: LRFSGRSSSCSA*AASSRFRQKGS
Trigger: GGATCCCTTCTGTCGGAACCTGGAGCTGGCCGCCCAGGCGGAGCATGAGGATGACCTACCGGAGAACCTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp TTGTGGCGGAAGCGCAGGCTACCCTGCCCTGGGCTGTaGTCTCCTGGCTCCTCGTCCAGCTCAGTCTGTATC +
Preference number: 3 (lower is better)
Translates to: LWRKRRLPCPGL*SPGSSSSSVCI
Trigger: GATACAGACTGAGCTGGACGAGGAGCCAGGAGACCACAGCCCAGGGCAGGGTAGCCTGCGCTTCCGCCACAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp CCCTCGCCTTTCTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGTCTCCAAGCATGGTCTaGGCAGCCGTCTTGGTGGCC +
Preference number: 3 (lower is better)
Translates to: PSPFSQLPSLPGPLQRQLSPSMV*AAVLVA
Trigger: GGCCACCAAGACGGCTGCCAAGACCATGCTTGGAGA...CAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAGAAAGGCGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR CAA 90 bp CTGCAGTGGCCGCTGTGTGGTCACCAAGCCCGAGTCCATGTCCACATGGAAGGCGTGCTGAACTGGGGCTaGGAGAACTGTGGCCGGCAG +
Preference number: 3 (lower is better)
Translates to: LQWPLCGHQARVHVHMEGVLNWG*ENCGRQ
Trigger: CTGCCGGCCACAGTTCTCCAAGCCCCAGTTCAGCAC...GCCTTCCATGTGGACATGGACTCGGGCTTGGTGACCACACAGCGGCCACTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp GTTGTGGCCTGCCAGGTCTCGGGCCACAATGTCCACCACGAAGTAGCCGGGGCTAACTCCCAGTCCCGGTaGCCCGCAGTCTTCAGGAAG +
Preference number: 3 (lower is better)
Translates to: VVACQVSGHNVHHEVAGANSQSR*PAVFRK
Trigger: CTTCCTGAAGACTGCGGGCAACCGGGACTGGGAGTT...AGCCCCGGCTACTTCGTGGTGGACATTGTGGCCCGAGACCTGGCAGGCCACAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp GAAGCCGCGCACACGGTCGGGGATCTCGTTAATGACGATCTTGACGCGCTGGTCAACTCTGAGCCCACCTaGGCGTCGGTGGCCACCCCT +
Preference number: 3 (lower is better)
Translates to: EAAHTVGDLVNDDLDALVNSEPT*ASVATP
Trigger: AGGGGTGGCCACCGACGCCAAGGTGGGCTCAGAGTT...GACCAGCGCGTCAAGATCGTCATTAACGAGATCCCCGACCGTGTGCGCGGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp CGGCGATCTCACTCAGGTTCTCCGGTAGGTCATCCTCATGCTCCGCCTGGGCGGCGTGGTGGCTGGTCGTaGATGTCCTCTAGCACAACG +
Preference number: 3 (lower is better)
Translates to: RRSHSGSPVGHPHAPPGRRGGWS*MSSSTT
Trigger: CGTTGTGCTAGAGGACATCAACGACCAGCCACCACG...CCGCCCAGGCGGAGCATGAGGATGACCTACCGGAGAACCTGAGTGAGATCGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp CGCACACGGTCGGGGATCTCGTTAATGACGATCTTGACGCGCTGGTCGTCCCTCATGATGGCCGTGTCGTaGTGGCCTGCCAGGTCTCGG +
Preference number: 3 (lower is better)
Translates to: RTRSGISLMTILTRWSSLMMAVS*WPARSR
Trigger: CCGAGACCTGGCAGGCCACAACGACACGGCCATCAT...GAGGGACGACCAGCGCGTCAAGATCGTCATTAACGAGATCCCCGACCGTGTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTTCGTTAATGACGATCTaGACGCGCTGGTCGTCCCTC +
Preference number: 3 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPSLMTI*TRWSSL
Trigger: GAGGGACGACCAGCGCGTCAAGATCGTCATTAACGA...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp CTCCTGGCTCCTCGTCCAGCTCAGTCTGTATCAGCTCAGAGATGGAGGAGTGGCGATTCTGTGCGGGCGTaGCGCTCGAAGGCAGTGGCC +
Preference number: 3 (lower is better)
Translates to: LLAPRPAQSVSAQRWRSGDSVRA*RSKAVA
Trigger: GGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATC...GCCACTCCTCCATCTCTGAGCTGATACAGACTGAGCTGGACGAGGAGCCAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR TCA 72 bp AATGTCTGCATCCAGGGCCAGCACCTGGATCAACTCTaGGCCCACCTTGGCGTCGGTGGCCACCCCTGCAGT +
Preference number: 3 (lower is better)
Translates to: NVCIQGQHLDQL*AHLGVGGHPCS
Trigger: ACTGCAGGGGTGGCCACCGACGCCAAGGTGGGCTCAGAGTTGATCCAGGTGCTGGCCCTGGATGCAGACATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 72 bp GAAGTTTGTGCAGGGGTGTGGATTTGGCGGATTCTGTaGGGGCGTTGCGCTCGAAGGCAGTGGCCTCGGCAG +
Preference number: 3 (lower is better)
Translates to: EVCAGVWIWRIL*GRCARRQWPRQ
Trigger: CTGCCGAGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAATCCACACCCCTGCACAAACTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp GAGCCTGCCCCAGTGGGCAGGCCCAGATTCCCTGTTTaGCTCAGCCTCCGAGTCGGAAACCCCATAGTTGGT +
Preference number: 3 (lower is better)
Translates to: EPAPVGRPRFPV*LSLRVGNPIVG
Trigger: ACCAACTATGGGGTTTCCGACTCGGAGGCTGAGCCAAACAGGGAATCTGGGCCTGCCCACTGGGGCAGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CCA 72 bp CAGCTGGGAGGAGGAGCAAACAGGGCTCTCCAAGCATaGTCTTGGCAGCCGTCTTGGTGGCCCCTCTTCAGG +
Preference number: 3 (lower is better)
Translates to: QLGGGANRALQA*SWQPSWWPLFR
Trigger: CCTGAAGAGGGGCCACCAAGACGGCTGCCAAGACCATGCTTGGAGAGCCCTGTTTGCTCCTCCTCCCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CCA 72 bp ACCTGCAGCGGCTGCATAGTCTCGTATGGCACTGGCTaGCCCAGGTCGCTGGCCACCAAGATGAGGCTGTAC +
Preference number: 3 (lower is better)
Translates to: TCSGCIVSYGTG*PRSLATKMRLY
Trigger: GTACAGCCTCATCTTGGTGGCCAGCGACCTGGGCCAGCCAGTGCCATACGAGACTATGCAGCCGCTGCAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp GTGCCGCGTGGTGAGTGCTCAGGCACTGTCAGCAGCTaGTACTGGGGGCTGCCTTTTGGAGGCCTCACGAAA +
Preference number: 3 (lower is better)
Translates to: VPRGECSGTVSS*YWGLPFGGLTK
Trigger: TTTCGTGAGGCCTCCAAAAGGCAGCCCCCAGTACCAGCTGCTGACAGTGCCTGAGCACTCACCACGCGGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp CGCAGAATGCCGTCCATGCTCCCCATGGTGAAGACCTaGCCCACATCTTCAGAGTCGTTGGCAAGGGCCCGG +
Preference number: 3 (lower is better)
Translates to: RRMPSMLPMVKT*PTSSESLARAR
Trigger: CCGGGCCCTTGCCAACGACTCTGAAGATGTGGGCCAGGTCTTCACCATGGGGAGCATGGACGGCATTCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp GCAGGGCAGACATGTCATCCGGCAGCCGGACAGAGATaGCAGGCTGCACGTCCAGGACGTTGTAGTTCCGGA +
Preference number: 3 (lower is better)
Translates to: AGQTCHPAAGQR*QAARPGRCSSG
Trigger: TCCGGAACTACAACGTCCTGGACGTGCAGCCTGCCATCTCTGTCCGGCTGCCGGATGACATGTCTGCCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp GAAGCGCAGGCTACCCTGCCCTGGGCTGTGGTCTCCTaGCTCCTCGTCCAGCTCAGTCTGTATCAGCTCAGA +
Preference number: 3 (lower is better)
Translates to: EAQATLPWAVVS*LLVQLSLYQLR
Trigger: TCTGAGCTGATACAGACTGAGCTGGACGAGGAGCCAGGAGACCACAGCCCAGGGCAGGGTAGCCTGCGCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR-3UTR CAA 90 bp CTCATCGATCATCTGGATCACCCGGTCCACGTCCAGGATGCGGTTGGTATCGCGAGGGCCAAGCCAAGGTaGTCCCCAAGGCCTGGCCTT +
Preference number: 3 (lower is better)
Translates to: LIDHLDHPVHVQDAVGIARAKPR*SPRPGL
Trigger: AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCT...CGCGATACCAACCGCATCCTGGACGTGGACCGGGTGATCCAGATGATCGATGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp GTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGTGCTCAGGCACTGTCAGCAGCACAAAGACAGGGCGGTaGTCATTGACGTCGATGACC +
Preference number: 3 (lower is better)
Translates to: VTLPTRVPRGECSGTVSSTKTGR*SLTSMT
Trigger: GGTCATCGACGTCAATGACAACCGCCCTGTCTTTGT...GCTGCTGACAGTGCCTGAGCACTCACCACGCGGCACCCTCGTGGGCAACGTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp ATGTTGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCGCGCACACGGTCGGGGCGTGGTGGCTGGTCGTaGATGTCCTCTAGCACAACG +
Preference number: 3 (lower is better)
Translates to: MLESRWMNSSSKPRTRSGRGGWS*MSSSTT
Trigger: CGTTGTGCTAGAGGACATCAACGACCAGCCACCACG...CCCCGACCGTGTGCGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCTGCACATTGTCAGTATaGACAATGGCCCCAGTGATG +
Preference number: 3 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPCTLSV*TMAPVM
Trigger: CATCACTGGGGCCATTGTCAATACTGACAATGTGCA...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp ATTTGGCGGATTCTGTGCGGGCGTTGCGCTCGAAGGCAGTGGCCTCGGCAGCGGCCCAGCTTGGCAATGTaGTCATACTCCTGGATGGCA +
Preference number: 3 (lower is better)
Translates to: IWRILCGRCARRQWPRQRPSLAM*SYSWMA
Trigger: TGCCATCCAGGAGTATGACAACATTGCCAAGCTGGG...CCGCTGCCGAGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTATCACGTCGCGAAGTTaGTGCAGGGGTGTGGATTTG +
Preference number: 3 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPITSRS*CRGVDL
Trigger: CAAATCCACACCCCTGCACAAACTTCGCGACGTGAT...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 72 bp CCCCCACATCCCCCTAGGTCTACCTGTAGATCCTCCTaGTTCAGAGACCGGTGCTGCAGGCTGCAGGAAGAC +
Preference number: 3 (lower is better)
Translates to: PPHPPRSTCRSS*FRDRCCRLQED
Trigger: GTCTTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGACCTAGGGGGATGTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR GCA 72 bp AGGGGTTCGTTGTCATCGATGTCCTCCAGGGCCACCTaGAGCGGCTGCATAGTCTCGTATGGCACTGGCTGG +
Preference number: 3 (lower is better)
Translates to: RGSLSSMSSRAT*SGCIVSYGTGW
Trigger: CCAGCCAGTGCCATACGAGACTATGCAGCCGCTGCAGGTGGCCCTGGAGGACATCGATGACAACGAACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp CAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTaGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGT +
Preference number: 3 (lower is better)
Translates to: QQRGMWRKCSET*TGVGCPASRGC
Trigger: ACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR CCA 72 bp TGCCACCTCCACCTGGACGTCCAGCAGAGAGGGATGTaGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGG +
Preference number: 3 (lower is better)
Translates to: CHLHLDVQQRGM*RKCSETWTGVG
Trigger: CCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTGGACGTCCAGGTGGAGGTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR CCA 72 bp GGTCAAGAGATGTGCACTCGTGGTCATCTGGGCCTTTaGCCTGAGGCTCCACAGGGTACAACCTGGGGCTCG +
Preference number: 3 (lower is better)
Translates to: GQEMCTRGHLGL*PEAPQGTTWGS
Trigger: CGAGCCCCAGGTTGTACCCTGTGGAGCCTCAGGCCAAAGGCCCAGATGACCACGAGTGCACATCTCTTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR CCA 72 bp AGTTTCCCACCTGTCGTGGGAGCAAGTTGGACTGCATaGGGAAGCAGTCACAGGAATCCCCACGGGGCCAGG +
Preference number: 3 (lower is better)
Translates to: SFPPVVGASWTA*GSSHRNPHGAR
Trigger: CCTGGCCCCGTGGGGATTCCTGTGACTGCTTCCCCATGCAGTCCAACTTGCTCCCACGACAGGTGGGAAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CCA 72 bp TCCCGATTCATGGGGGACTTCACCATTACAGATCCCTaGGCCGCCTCCTCCTCCTCCTCCTCCTCCTCTTCC +
Preference number: 3 (lower is better)
Translates to: SRFMGDFTITDP*AASSSSSSSSS
Trigger: GGAAGAGGAGGAGGAGGAGGAGGAGGAGGCGGCCCAGGGATCTGTAATGGTGAAGTCCCCCATGAATCGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp GTCCAGGCGCTGAGCAGTCTGGATGAGGCCGCTGATTaGGTCGATGATGAAGAACTCCCAGTCCCGGTTGCC +
Preference number: 3 (lower is better)
Translates to: VQALSSLDEAAD*VDDEELPVPVA
Trigger: GGCAACCGGGACTGGGAGTTCTTCATCATCGACCCAATCAGCGGCCTCATCCAGACTGCTCAGCGCCTGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp CTGTTGTTGCCAATGTCTGCATCCAGGGCCAGCACCTaGATCAACTCTGAGCCCACCTTGGCGTCGGTGGCC +
Preference number: 3 (lower is better)
Translates to: LLLPMSASRAST*INSEPTLASVA
Trigger: GGCCACCGACGCCAAGGTGGGCTCAGAGTTGATCCAGGTGCTGGCCCTGGATGCAGACATTGGCAACAACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp CCGCAGGTATCGGTCATCATCAGGCTTGACAGCTGCTaGCTCACGCCCAAAAGTTCCATGGGTGCGCGTGGG +
Preference number: 3 (lower is better)
Translates to: PQVSVIIRLDSC*LTPKSSMGARG
Trigger: CCCACGCGCACCCATGGAACTTTTGGGCGTGAGCCAGCAGCTGTCAAGCCTGATGATGACCGATACCTGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp GAAGCGCAGGCTACCCTGCCCTGGGCTGTGGTCTCCTaGCTCCTCGTCCAGCTCAGTCTGTATCAGCTTGAT +
Preference number: 3 (lower is better)
Translates to: EAQATLPWAVVS*LLVQLSLYQLD
Trigger: ATCAAGCTGATACAGACTGAGCTGGACGAGGAGCCAGGAGACCACAGCCCAGGGCAGGGTAGCCTGCGCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647092.1
3UTR-3UTR CAA 90 bp TGGACGTCCAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGGGGAGGAGGGCCTGTTaGGCCTCTTTCAGCTCAGCC +
Preference number: 3 (lower is better)
Translates to: WTSSREGCGGNVARLGLEGRRAC*ASFSSA
Trigger: GGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCC...CTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTGGACGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR CAA 90 bp CATCTGCATCCACTGCGCCTGTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGTGGTAGGTCGCTGGCATaGTCAATCACTGAGAGAGTG +
Preference number: 3 (lower is better)
Translates to: HLHPLRLSRCPRGCRVVSGRSLA*SITERV
Trigger: CACTCTCTCAGTGATTGACAATGCCAGCGACCTACC...ACTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCAGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp GCCGATGATGGCCGTGTCGTTGTGGCCTGCCAGGTCTCGGGCCACAATGTCCACTGGGGCGTATTGTCATaGACGTCCAGGACGTTGACA +
Preference number: 3 (lower is better)
Translates to: ADDGRVVVACQVSGHNVHWGVLS*TSRTLT
Trigger: TGTCAACGTCCTGGACGTCAATGACAATACGCCCCA...GTGGACATTGTGGCCCGAGACCTGGCAGGCCACAACGACACGGCCATCATCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp GTAGGCCATGAAGAGGTCGAAGGTGCGCAGAATGCCGTCCATGCTCCCCATGGTGCAGTGTACTCAGCCTaGGTGAAGCGTGGTGGCTGG +
Preference number: 3 (lower is better)
Translates to: VGHEEVEGAQNAVHAPHGAVYSA*VKRGGW
Trigger: CCAGCCACCACGCTTCACCAAGGCTGAGTACACTGC...ACCATGGGGAGCATGGACGGCATTCTGCGCACCTTCGACCTCTTCATGGCCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR TCA 72 bp AGAGATGTGCACTCGTGGTCATCTGGGCCTTTGGCCTaGGGCTCCACAGGGTACAACCTGGGGCTCGTAACC +
Preference number: 3 (lower is better)
Translates to: RDVHSWSSGPLA*GSTGYNLGLVT
Trigger: GGTTACGAGCCCCAGGTTGTACCCTGTGGAGCCTCAGGCCAAAGGCCCAGATGACCACGAGTGCACATCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR TCA 72 bp AGGTGCCCGCCGGCTCATTCTCATACACGCTTGTGCTaGACTGGGGCTTGGAGAACTGTGGCCGGCAGTCAT +
Preference number: 3 (lower is better)
Translates to: RCPPAHSHTRLC*TGAWRTVAGSH
Trigger: ATGACTGCCGGCCACAGTTCTCCAAGCCCCAGTTCAGCACAAGCGTGTATGAGAATGAGCCGGCGGGCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR TCA 72 bp CAATGTCCACCACGAAGTAGCCGGGGCTGTAGGCCATaGAGAGGTCGAAGGTGCGCAGAATGCCGTCCATGC +
Preference number: 3 (lower is better)
Translates to: QCPPRSSRGCRP*RGRRCAECRPC
Trigger: GCATGGACGGCATTCTGCGCACCTTCGACCTCTTCATGGCCTACAGCCCCGGCTACTTCGTGGTGGACATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR TCA 72 bp GGATGGCAGCCCGCAGGTATCGGTCATCATCAGGCTTaGCAGCTGCTGGCTCACGCCCAAAAGTTCCATGGG +
Preference number: 3 (lower is better)
Translates to: GWQPAGIGHHQA*QLLAHAQKFHG
Trigger: CCCATGGAACTTTTGGGCGTGAGCCAGCAGCTGTCAAGCCTGATGATGACCGATACCTGCGGGCTGCCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 72 bp GTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTaGAGGAAGACAGTGGCCCAAGCAGTCTGGGACACA +
Preference number: 3 (lower is better)
Translates to: VDPPASETGAAG*RKTVAQAVWDT
Trigger: TGTGTCCCAGACTGCTTGGGCCACTGTCTTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR GCA 72 bp GATGAAGTAGTACACGATCGCGTTGGGGCCCTCATCTaGATCCACTGCGCCTGTCACGTTGCCCACGAGGGT +
Preference number: 3 (lower is better)
Translates to: DEVVHDRVGALI*IHCACHVAHEG
Trigger: ACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCAGATGAGGGCCCCAACGCGATCGTGTACTACTTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 72 bp TGGTCGTTGATGTCCTCTAGCACAACGCGCACCTCCTaGAGTGTGAGGTCAGCAACCAGGTCGAGGGTTGGG +
Preference number: 3 (lower is better)
Translates to: WSLMSSSTTRTS*SVRSATRSRVG
Trigger: CCCAACCCTCGACCTGGTTGCTGACCTCACACTGCAGGAGGTGCGCGTTGTGCTAGAGGACATCAACGACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 72 bp AGCCCGCAGGTATCGGTCATCATCAGGCTTGACAGCTaGTGGCTCACGCCCAAAAGTTCCATGGGTGCGCGT +
Preference number: 3 (lower is better)
Translates to: SPQVSVIIRLDS*WLTPKSSMGAR
Trigger: ACGCGCACCCATGGAACTTTTGGGCGTGAGCCAGCAGCTGTCAAGCCTGATGATGACCGATACCTGCGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp CACCACGGTCAGACTGAACTTCTCGTAGGACTGCAGTaGCCGCTGTGTGGTCACCAAGCCCGAGTCCATGTC +
Preference number: 3 (lower is better)
Translates to: HHGQTELLVGLQ*PLCGHQARVHV
Trigger: GACATGGACTCGGGCTTGGTGACCACACAGCGGCCACTGCAGTCCTACGAGAAGTTCAGTCTGACCGTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp TCCCGCAGCACCAGCAGACACCCATCGGGCTGCAGATaGAAGTTCTTCTCTTCGTTGCCGGCTGCGATGAAG +
Preference number: 3 (lower is better)
Translates to: SRSTSRHPSGCR*KFFSSLPAAMK
Trigger: CTTCATCGCAGCCGGCAACGAAGAGAAGAACTTCCATCTGCAGCCCGATGGGTGTCTGCTGGTGCTGCGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp CCTGCAGTGTACTCAGCCTTGGTGAAGCGTGGTGGCTaGTCGTTGATGTCCTCTAGCACAACGCGCACCTCC +
Preference number: 3 (lower is better)
Translates to: PAVYSALVKRGG*SLMSSSTTRTS
Trigger: GGAGGTGCGCGTTGTGCTAGAGGACATCAACGACCAGCCACCACGCTTCACCAAGGCTGAGTACACTGCAGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp GGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGATCTGAGCAGCTGATGCGGAGGGCCAAGCCAAGGTaGTCCCCAAGGCCTGGCCTT +
Preference number: 3 (lower is better)
Translates to: GQMLNERLAKVGSEQLMRRAKPR*SPRPGL
Trigger: AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCT...CCGCATCAGCTGCTCAGATCCCACTTTTGCCAGACGCTCATTCAGCATCTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTATGGGGTTGTTGTCATaGATGTCCACGATTTCCAGG +
Preference number: 3 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLMGLLS*MSTISR
Trigger: CCTGGAAATCGTGGACATCAATGACAACAACCCCAT...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp TGGTCAGTGGCCATCATGGTGATGACCGAGGTGCCCGCCGGCTCATTCTCATACGCTACATCCCCAGGGTaGTCTTTGGCCAAGGCAGTC +
Preference number: 3 (lower is better)
Translates to: WSVAIMVMTEVPAGSFSYATSPG*SLAKAV
Trigger: GACTGCCTTGGCCAAAGACAACCCTGGGGATGTAGC...GTATGAGAATGAGCCGGCGGGCACCTCGGTCATCACCATGATGGCCACTGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp CCGCAGGTAATCCTCCAGGACCACCTTCAGCAGCGAGCCCTTGATTGGCCCCTCACAAAGACAGGGCGGTaGTCATTGACGTCGATGACC +
Preference number: 3 (lower is better)
Translates to: PQVILQDHLQQRALDWPLTKTGR*SLTSMT
Trigger: GGTCATCGACGTCAATGACAACCGCCCTGTCTTTGT...GAGGGGCCAATCAAGGGCTCGCTGCTGAAGGTGGTCCTGGAGGATTACCTGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR-3UTR CAA 90 bp ATGAACTCCTCCTCGAAGCCGCGCACACGGTCGGGGATCTCGTTAATGACGATCACTGGGGGCTGCCTTTaGGAGGCCTCACGAAAAGGG +
Preference number: 3 (lower is better)
Translates to: MNSSSKPRTRSGISLMTITGGCL*EASRKG
Trigger: CCCTTTTCGTGAGGCCTCCAAAAGGCAGCCCCCAGT...GATCGTCATTAACGAGATCCCCGACCGTGTGCGCGGCTTCGAGGAGGAGTTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGCTTGTTCATTGACATaGACTTTCTTGTCCACGTGG +
Preference number: 3 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPACSLT*TFLSTW
Trigger: CCACGTGGACAAGAAAGTCAATGTCAATGAACAAGC...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR CAA 90 bp AGCACTTGGATCACCACCTGCACTGAATTTTCGCGACGGTTGCTGGCTACATCCAGCCCATTAAGGCCCTaGTCAGGGTCCACGGCTGCC +
Preference number: 3 (lower is better)
Translates to: STWITTCTEFSRRLLATSSPLRP*SGSTAA
Trigger: GGCAGCCGTGGACCCTGACAAGGGCCTTAATGGGCT...GGATGTAGCCAGCAACCGTCGCGAAAATTCAGTGCAGGTGGTGATCCAAGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp CTCCTGGCTCCTCGTCCAGCTCAGTCTGTATCAGCTCAGAGATGGAGGAGTGGCTCACCCGTGGTGGGGTaGATGGCAAACTTGCTCTCT +
Preference number: 3 (lower is better)
Translates to: LLAPRPAQSVSAQRWRSGSPVVG*MANLLS
Trigger: AGAGAGCAAGTTTGCCATCAACCCCACCACGGGTGA...GCCACTCCTCCATCTCTGAGCTGATACAGACTGAGCTGGACGAGGAGCCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR-3UTR CAA 90 bp AATGGCCCCAGTGATGTTGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCGCGTCACCCGTGGTGGGGTaGATGGCAAACTTGCTCTCT +
Preference number: 3 (lower is better)
Translates to: NGPSDVGEQVDELLLEAASPVVG*MANLLS
Trigger: AGAGAGCAAGTTTGCCATCAACCCCACCACGGGTGA...CGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAACATCACTGGGGCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp CCAGCTGCGATTGCTGGAGGCCTTGACGATGAAGGAGAAGATGGCTTCTCGCTCGCTACATCCCCAGGGTaGTCTTTGGCCAAGGCAGTC +
Preference number: 3 (lower is better)
Translates to: PAAIAGGLDDEGEDGFSLATSPG*SLAKAV
Trigger: GACTGCCTTGGCCAAAGACAACCCTGGGGATGTAGC...GAGCGAGAAGCCATCTTCTCCTTCATCGTCAAGGCCTCCAGCAATCGCAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp ACGGTCGGGGATCTCGTTAATGACGATCTTGACGCGCTGGTCGTCCCTCAGGATGAATTTTCGCGACGGTaGCTGGCTACATCCCCAGGG +
Preference number: 3 (lower is better)
Translates to: TVGDLVNDDLDALVVPQDEFSRR*LATSPG
Trigger: CCCTGGGGATGTAGCCAGCAACCGTCGCGAAAATTC...ATCCTGAGGGACGACCAGCGCGTCAAGATCGTCATTAACGAGATCCCCGACCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp AGCCCGCAGGTATCGGTCATCATCAGGCTTGACAGCTGCTGGCTCACGCCCAAATTCACCCGGCCCTTCTaGTCCACATGGAACTGCACA +
Preference number: 3 (lower is better)
Translates to: SPQVSVIIRLDSCWLTPKFTRPF*STWNCT
Trigger: TGTGCAGTTCCATGTGGACAAGAAGGGCCGGGTGAA...TTTGGGCGTGAGCCAGCAGCTGTCAAGCCTGATGATGACCGATACCTGCGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTTCAAAGGAGTACTTGTaGGTGTTAGGCATGTCCATG +
Preference number: 3 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLSKEYL*VLGMSM
Trigger: CATGGACATGCCTAACACCAACAAGTACTCCTTTGA...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp GGGGGTCTCCATGATCACGTCGCGAAGTTTGTGCAGGGGTGTGGATTTGGCGGATCCAGCCACACAGGGTaGGCTCCATCAAAGGAGTAC +
Preference number: 3 (lower is better)
Translates to: GGLHDHVAKFVQGCGFGGSSHTG*APSKEY
Trigger: GTACTCCTTTGATGGAGCCAACCCTGTGTGGCTGGA...TCCGCCAAATCCACACCCCTGCACAAACTTCGCGACGTGATCATGGAGACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR TCA 72 bp TCCTTGCATGCCCAGGCCAGCGCCCTTTCCCAAAGATaGTCCTCAGAAGAGCACCTTCCTCTCTGCAGACCC +
Preference number: 3 (lower is better)
Translates to: SLHAQASALSQR*SSEEHLPLCRP
Trigger: GGGTCTGCAGAGAGGAAGGTGCTCTTCTGAGGATCATCTTTGGGAAAGGGCGCTGGCCTGGGCATGCAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR TCA 72 bp GTCCACATGGAAGGCCTCCACGCCAGGGCCCTCAAGTaGGTAGGTCAACTCTCCATTGGGACCTTCATCCTG +
Preference number: 3 (lower is better)
Translates to: VHMEGLHARALK*VGQLSIGTFIL
Trigger: CAGGATGAAGGTCCCAATGGAGAGTTGACCTACTCACTTGAGGGCCCTGGCGTGGAGGCCTTCCATGTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 72 bp CTTGAGAGGGCCCAGCCAGTGCTCTCCAGGTGGCCCTaGTCATCTGTACCCTCTGGTCATGTGTTATCTGCT +
Preference number: 3 (lower is better)
Translates to: LERAQPVLSRWP*SSVPSGHVLSA
Trigger: AGCAGATAACACATGACCAGAGGGTACAGATGAGCAGGGCCACCTGGAGAGCACTGGCTGGGCCCTCTCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR GCA 72 bp GATGTAGATGCCGATGATGGCCGTGTCGTTGTGGCCTaGCAGGTCTCGGGCCACAATGTCCACCACGAAGTA +
Preference number: 3 (lower is better)
Translates to: DVDADDGRVVVA*QVSGHNVHHEV
Trigger: TACTTCGTGGTGGACATTGTGGCCCGAGACCTGGCAGGCCACAACGACACGGCCATCATCGGCATCTACATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp TCGGACCTCAGTTTCCCACCTGTCGTGGGAGCAAGTTaGACTGCATGGGGAAGCAGTCACAGGAATCCCCAC +
Preference number: 3 (lower is better)
Translates to: SDLSFPPVVGAS*TAWGSSHRNPH
Trigger: GTGGGGATTCCTGTGACTGCTTCCCCATGCAGTCCAACTTGCTCCCACGACAGGTGGGAAACTGAGGTCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CCA 72 bp GGCCAGGAGTCAGGAGACCTGCTTCTGACCTTCACTTaGCCATTGGCTCACAATGTGGCCTTGGCCTTCCCA +
Preference number: 3 (lower is better)
Translates to: GQESGDLLLTFT*PLAHNVALAFP
Trigger: TGGGAAGGCCAAGGCCACATTGTGAGCCAATGGCCAAGTGAAGGTCAGAAGCAGGTCTCCTGACTCCTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CCA 72 bp CCCGCCGGCTCATTCTCATACACGCTTGTGCTGAACTaGGGCTTGGAGAACTGTGGCCGGCAGTCATTGACA +
Preference number: 3 (lower is better)
Translates to: PAGSFSYTLVLN*GLENCGRQSLT
Trigger: TGTCAATGACTGCCGGCCACAGTTCTCCAAGCCCCAGTTCAGCACAAGCGTGTATGAGAATGAGCCGGCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp GATCTCCTCTCTGATGTGGAGGATGGTGCCGTTGGGTaGGCGCACAAAGACAGGGCGGTTGTCATTGACGTC +
Preference number: 3 (lower is better)
Translates to: DLLSDVEDGAVG*AHKDRAVVIDV
Trigger: GACGTCAATGACAACCGCCCTGTCTTTGTGCGCCCACCCAACGGCACCATCCTCCACATCAGAGAGGAGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp CTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCATCTGGGCCGCCCAGATTCCCTGTTaGGCTCAGCCTCCGAGTCGG +
Preference number: 3 (lower is better)
Translates to: LLDERLLVKRCALVVIWAAQIPC*AQPPSR
Trigger: CCGACTCGGAGGCTGAGCCAAACAGGGAATCTGGGC...GGCCCAGATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR CAA 90 bp GGTCCAGGTCCCGCAGCACCAGCAGACACCCATCGGGCTGCAGATGGAAGTTCTTCAATGAGTGCAAAGTaGCCTGAGTCAGCATCAGTG +
Preference number: 3 (lower is better)
Translates to: GPGPAAPADTHRAADGSSSMSAK*PESASV
Trigger: CACTGATGCTGACTCAGGCAACTTTGCACTCATTGA...AGAACTTCCATCTGCAGCCCGATGGGTGTCTGCTGGTGCTGCGGGACCTGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp CTCCTGGCTCCTCGTCCAGCTCAGTCTGTATCAGCTCAGAGATGGAGGAGTGGCACGAAAAGGGGTTCGTaGTCATCGATGTCCTCCAGG +
Preference number: 3 (lower is better)
Translates to: LLAPRPAQSVSAQRWRSGTKRGS*SSMSSR
Trigger: CCTGGAGGACATCGATGACAACGAACCCCTTTTCGT...GCCACTCCTCCATCTCTGAGCTGATACAGACTGAGCTGGACGAGGAGCCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR-3UTR CAA 90 bp GGGGGTCTCCATGATCACGTCGCGAAGTTTGTGCAGGGGTGTGGATTTGGCGGAACGAAAAGGGGTTCGTaGTCATCGATGTCCTCCAGG +
Preference number: 3 (lower is better)
Translates to: GGLHDHVAKFVQGCGFGGTKRGS*SSMSSR
Trigger: CCTGGAGGACATCGATGACAACGAACCCCTTTTCGT...TCCGCCAAATCCACACCCCTGCACAAACTTCGCGACGTGATCATGGAGACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp CCGGTCCAGAGAAGACAGCACATAGATGTCACCCGTGGTGGGGTTGATGGCAAACAAGTGGAAGCCCATTaGGAGTGGAGAGCTCAGGGG +
Preference number: 3 (lower is better)
Translates to: PVQRRQHIDVTRGGVDGKQVEAH*EWRAQG
Trigger: CCCCTGAGCTCTCCACTCCAAATGGGCTTCCACTTG...TTTGCCATCAACCCCACCACGGGTGACATCTATGTGCTGTCTTCTCTGGACCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR GCA 72 bp GGGGCCTTACCTCCCTCTAGAATGAACCTTGGTAGATaGTCCCCGTCCCTGCAACCAACAGGTTCAGGAGGT +
Preference number: 3 (lower is better)
Translates to: GALPPSRMNLGR*SPSLQPTGSGG
Trigger: ACCTCCTGAACCTGTTGGTTGCAGGGACGGGGAGCATCTACCAAGGTTCATTCTAGAGGGAGGTAAGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
3UTR CCA 72 bp AGTGCTCTCCAGGTGGCCCTGCTCATCTGTACCCTCTaGTCATGTGTTATCTGCTGGCCAGGATCTGTGAGC +
Preference number: 3 (lower is better)
Translates to: SALQVALLICTL*SCVICWPGSVS
Trigger: GCTCACAGATCCTGGCCAGCAGATAACACATGACCAGAGGGTACAGATGAGCAGGGCCACCTGGAGAGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CCA 72 bp GGATCACCACCTGCACTGAATTTTCGCGACGGTTGCTaGCTACATCCCCAGGGTTGTCTTTGGCCAAGGCAG +
Preference number: 3 (lower is better)
Translates to: GSPPALNFRDGC*LHPQGCLWPRQ
Trigger: CTGCCTTGGCCAAAGACAACCCTGGGGATGTAGCCAGCAACCGTCGCGAAAATTCAGTGCAGGTGGTGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp ACGTCCAGGATGCGGTTGGTATCGCGGTTCACCACGTaGATAAGCAGTTCTGTCTGCGCAAAGTTCACCCGG +
Preference number: 3 (lower is better)
Translates to: TSRMRLVSRFTT*ISSSVCAKFTR
Trigger: CCGGGTGAACTTTGCGCAGACAGAACTGCTTATCCACGTGGTGAACCGCGATACCAACCGCATCCTGGACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp ACCCGTGGGCCCCCAGTTTGCAGCTTTGGTATTAGATTACTGCTAGGGACCCTGTCCAAGCAGGCTCTATaGGAGAAGCCCACTGTCCCT +
Preference number: 3 (lower is better)
Translates to: TRGPPVCSFGIRLLLGTLSKQAL*EKPTVP
Trigger: AGGGACAGTGGGCTTCTCCAATAGAGCCTGCTTGGA...CAGGGTCCCTAGCAGTAATCTAATACCAAAGCTGCAAACTGGGGGCCCACGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR CAA 90 bp TGGTCGTTGATGTCCTCTAGCACAACGCGCACCTCCTGCAGTGTGAGGTCAGCAGGTAGGTCGCTGGCATaGTCAATCACTGAGAGAGTG +
Preference number: 3 (lower is better)
Translates to: WSLMSSSTTRTSCSVRSAGRSLA*SITERV
Trigger: CACTCTCTCAGTGATTGACAATGCCAGCGACCTACC...TGCTGACCTCACACTGCAGGAGGTGCGCGTTGTGCTAGAGGACATCAACGACCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp TGGTCGTTGATGTCCTCTAGCACAACGCGCACCTCCTGCAGTGTGAGGTCAGCATGGGGCGTATTGTCATaGACGTCCAGGACGTTGACA +
Preference number: 3 (lower is better)
Translates to: WSLMSSSTTRTSCSVRSAWGVLS*TSRTLT
Trigger: TGTCAACGTCCTGGACGTCAATGACAATACGCCCCA...TGCTGACCTCACACTGCAGGAGGTGCGCGTTGTGCTAGAGGACATCAACGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp GCAATGTTGTCATACTCCTGGATGGCAGCCCGCAGGTATCGGTCATCATCAGGCATGGCCCCAGTGATGTaGGAGAGCAGGTGGATGAAC +
Preference number: 3 (lower is better)
Translates to: AMLSYSWMAARRYRSSSGMAPVM*ESRWMN
Trigger: GTTCATCCACCTGCTCTCCAACATCACTGGGGCCAT...GCCTGATGATGACCGATACCTGCGGGCTGCCATCCAGGAGTATGACAACATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 72 bp CTTGGATCACCACCTGCACTGAATTTTCGCGACGGTTaGTGGCTACATCCCCAGGGTTGTCTTTGGCCAAGG +
Preference number: 3 (lower is better)
Translates to: LGSPPALNFRDG*WLHPQGCLWPR
Trigger: CCTTGGCCAAAGACAACCCTGGGGATGTAGCCAGCAACCGTCGCGAAAATTCAGTGCAGGTGGTGATCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 72 bp GTATCGCGGTTCACCACGTGGATAAGCAGTTCTGTCTaGGCAAAGTTCACCCGGCCCTTCTTGTCCACATGG +
Preference number: 3 (lower is better)
Translates to: VSRFTTWISSSV*AKFTRPFLSTW
Trigger: CCATGTGGACAAGAAGGGCCGGGTGAACTTTGCGCAGACAGAACTGCTTATCCACGTGGTGAACCGCGATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 72 bp GGAGTGGCAGGAGGAGGCTTTTTGCACCATCCGCTGTaGAAAGAGCTTTTTGAGCCGCAGGTAATCCTCCAG +
Preference number: 3 (lower is better)
Translates to: GVAGGGFLHHPL*KELFEPQVILQ
Trigger: CTGGAGGATTACCTGCGGCTCAAAAAGCTCTTTGCACAGCGGATGGTGCAAAAAGCCTCCTCCTGCCACTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR GCA 72 bp AGCTCAGAGATGGAGGAGTGGCAGGAGGAGGCTTTTTaGACCATCCGCTGTGCAAAGAGCTTTTTGAGCCGC +
Preference number: 3 (lower is better)
Translates to: SSEMEEWQEEAF*TIRCAKSFLSR
Trigger: GCGGCTCAAAAAGCTCTTTGCACAGCGGATGGTGCAAAAAGCCTCCTCCTGCCACTCCTCCATCTCTGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR CCA 72 bp TTGCTGATGACCCGTCAAAGCAGTCCCACCCCAGGATaGGCTTCTCAGAATCCCAAACCCTTGACCTCTCCT +
Preference number: 3 (lower is better)
Translates to: LLMTRQSSPTPG*ASQNPKPLTSP
Trigger: AGGAGAGGTCAAGGGTTTGGGATTCTGAGAAGCCCATCCTGGGGTGGGACTGCTTTGACGGGTCATCAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CCA 72 bp TGCAGACCCCCTCGCTGCTGCTTGATGAAAGACTTCTaGTCAAGAGATGTGCACTCGTGGTCATCTGGGCCT +
Preference number: 3 (lower is better)
Translates to: CRPPRCCLMKDF*SRDVHSWSSGP
Trigger: AGGCCCAGATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR CCA 72 bp CGCGACGGTTGCTGGCTACATCCCCAGGGTTGTCTTTaGCCAAGGCAGTCAGGATATAGTGGTCCTTCTTCT +
Preference number: 3 (lower is better)
Translates to: RDGCWLHPQGCL*PRQSGYSGPSS
Trigger: AGAAGAAGGACCACTATATCCTGACTGCCTTGGCCAAAGACAACCCTGGGGATGTAGCCAGCAACCGTCGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp ATGATCTGGCCCAGCTTGGCAATGTTGTCATACTCCTaGATGGCAGCCCGCAGGTATCGGTCATCATCAGGC +
Preference number: 3 (lower is better)
Translates to: MIWPSLAMLSYS*MAARRYRSSSG
Trigger: GCCTGATGATGACCGATACCTGCGGGCTGCCATCCAGGAGTATGACAACATTGCCAAGCTGGGCCAGATCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp AGCAGCGAGCCCTTGATTGGCCCCTCACGAATGATCTaGCCCAGCTTGGCAATGTTGTCATACTCCTGGATG +
Preference number: 3 (lower is better)
Translates to: SSEPLIGPSRMI*PSLAMLSYSWM
Trigger: CATCCAGGAGTATGACAACATTGCCAAGCTGGGCCAGATCATTCGTGAGGGGCCAATCAAGGGCTCGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR CCA 72 bp TCCAGCTCAGTCTGTATCAGCTCAGAGATGGAGGAGTaGCAGGAGGAGGCTTTTTGCACCATCCGCTGTGCA +
Preference number: 3 (lower is better)
Translates to: SSSVCISSEMEE*QEEAFCTIRCA
Trigger: TGCACAGCGGATGGTGCAAAAAGCCTCCTCCTGCCACTCCTCCATCTCTGAGCTGATACAGACTGAGCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR-3UTR CAA 90 bp TGTCCACAAACATGCCCCCACATCCCCCTAGGTCTACCTGTAGATCCTCCTGCTCCCAGCATGGAGAAGTaGCCAAATGGCAAAGGTTCC +
Preference number: 3 (lower is better)
Translates to: CPQTCPHIPLGLPVDPPAPSMEK*PNGKGS
Trigger: GGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGG...AGCAGGAGGATCTACAGGTAGACCTAGGGGGATGTGGGGGCATGTTTGTGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR-3UTR CAA 90 bp TGGAACTGCACATTGTCAGTATTGACAATGGCCCCAGTGATGTTGGAGAGCAGGGCAGTGTACTCAGCCTaGGTGAAGCGTGGTGGCTGG +
Preference number: 3 (lower is better)
Translates to: WNCTLSVLTMAPVMLESRAVYSA*VKRGGW
Trigger: CCAGCCACCACGCTTCACCAAGGCTGAGTACACTGC...CCTGCTCTCCAACATCACTGGGGCCATTGTCAATACTGACAATGTGCAGTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR TCA 72 bp TCCCTAGGAATCATGGGGCCTTACCTCCCTCTAGAATaGACCTTGGTAGATGCTCCCCGTCCCTGCAACCAA +
Preference number: 3 (lower is better)
Translates to: SLGIMGPYLPLE*TLVDAPRPCNQ
Trigger: TTGGTTGCAGGGACGGGGAGCATCTACCAAGGTTCATTCTAGAGGGAGGTAAGGCCCCATGATTCCTAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
3UTR TCA 72 bp ACAGGTGGGAATTCTCAACAGGTCCCCAAGGAAGGATaGGGCCACATTCCTCCAAGTCACTGCTCTGTCACC +
Preference number: 3 (lower is better)
Translates to: TGGNSQQVPKEG*GHIPPSHCSVT
Trigger: GGTGACAGAGCAGTGACTTGGAGGAATGTGGCCTCATCCTTCCTTGGGGACCTGTTGAGAATTCCCACCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
3UTR TCA 72 bp CCTCACTTTGACTCCCCAGTTCTGTGCACAGAAGTATaGGGCTTCTGTGTACAGAGTGAAGCGTGGCCCAGC +
Preference number: 3 (lower is better)
Translates to: PHFDSPVLCTEV*GFCVQSEAWPS
Trigger: GCTGGGCCACGCTTCACTCTGTACACAGAAGCCTCATACTTCTGTGCACAGAACTGGGGAGTCAAAGTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR TCA 72 bp CCACCCCAGGATGGGCTTCTCAGAATCCCAAACCCTTaGCCTCTCCTCACAACGCGAGGGTTAAACACTTTG +
Preference number: 3 (lower is better)
Translates to: PPQDGLLRIPNP*PLLTTRGLNTL
Trigger: CAAAGTGTTTAACCCTCGCGTTGTGAGGAGAGGTCAAGGGTTTGGGATTCTGAGAAGCCCATCCTGGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR TCA 72 bp GTAAGTCTTCCCTATACCCGCTGCCCTGGGTCCAGCTaGTCTGCCTTTGAGCTTCTGTCTTGTTGCTGTTGC +
Preference number: 3 (lower is better)
Translates to: VSLPYTRCPGSS*SAFELLSCCCC
Trigger: GCAACAGCAACAAGACAGAAGCTCAAAGGCAGATCAGCTGGACCCAGGGCAGCGGGTATAGGGAAGACTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR TCA 72 bp CGACAAGGACCGTCTGCTGCACTGCGTCTAATGGGATaGTCTTCAGTGGGAAAGGAAATGCCCTGTCAGGTG +
Preference number: 3 (lower is better)
Translates to: RQGPSAALRLMG*SSVGKEMPCQV
Trigger: CACCTGACAGGGCATTTCCTTTCCCACTGAAGATCATCCCATTAGACGCAGTGCAGCAGACGGTCCTTGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR TCA 72 bp CTGGTAGGTCGCTGGCATTGTCAATCACTGAGAGAGTaGCCTCATAGGTGGCAACCAGCTCCCGATTCATGG +
Preference number: 3 (lower is better)
Translates to: LVGRWHCQSLRE*PHRWQPAPDSW
Trigger: CCATGAATCGGGAGCTGGTTGCCACCTATGAGGTCACTCTCTCAGTGATTGACAATGCCAGCGACCTACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 72 bp TGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATaGCACCTCCACCTGGACGTCCAGCAGAGAGGGATG +
Preference number: 3 (lower is better)
Translates to: CSLTLTFLSTWG*HLHLDVQQRGM
Trigger: CATCCCTCTCTGCTGGACGTCCAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR GCA 72 bp GAAGAGCACCTTCCTCTCTGCAGACCCCCTCGCTGCTaGTTGATGAAAGACTTCTGGTCAAGAGATGTGCAC +
Preference number: 3 (lower is better)
Translates to: EEHLPLCRPPRC*LMKDFWSRDVH
Trigger: GTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCTGCAGAGAGGAAGGTGCTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR GCA 72 bp CGTTGGCAAGGGCCCGGAAGTAGTGGATGGCCAGAATaGTGTAGAAGACAAGGCTGTTGTTGCCAATGTCTG +
Preference number: 3 (lower is better)
Translates to: RWQGPGSSGWPE*CRRQGCCCQCL
Trigger: CAGACATTGGCAACAACAGCCTTGTCTTCTACAGCATTCTGGCCATCCACTACTTCCGGGCCCTTGCCAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp AGATCTTATGAAGGTAGAGGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGAAGGGCCAAGCCAAGGTaGTCCCCAAGGCCTGGCCTT +
Preference number: 3 (lower is better)
Translates to: RSYEGRGQMLNERLAKVGRAKPR*SPRPGL
Trigger: AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCT...TCCCACTTTTGCCAGACGCTCATTCAGCATCTGACCTCTACCTTCATAAGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp CCGGTCCAGAGAAGACAGCACATAGATGTCACCCGTGGTGGGGTTGATGGCAAATTGACGTCCAGGACGTaGACAGTCAGCTTGGCATTT +
Preference number: 3 (lower is better)
Translates to: PVQRRQHIDVTRGGVDGKLTSRT*TVSLAF
Trigger: AAATGCCAAGCTGACTGTCAACGTCCTGGACGTCAA...TTTGCCATCAACCCCACCACGGGTGACATCTATGTGCTGTCTTCTCTGGACCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp GTGGATAAGCAGTTCTGTCTGCGCAAAGTTCACCCGGCCCTTCTTGTCCACATGGTGATCCCAAAGGGCTaGAACTGGGGCGTATTGTCA +
Preference number: 3 (lower is better)
Translates to: VDKQFCLRKVHPALLVHMVIPKG*NWGVLS
Trigger: TGACAATACGCCCCAGTTCAAGCCCTTTGGGATCAC...CATGTGGACAAGAAGGGCCGGGTGAACTTTGCGCAGACAGAACTGCTTATCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR TCA 72 bp GCTTCCTCTTGTGTACAGTCCTGTAGTACCAGTTCATaGGGACAAAGAGCATGGCGGCCAGGAACAGGAGGA +
Preference number: 3 (lower is better)
Translates to: ASSCVQSCSTSS*GQRAWRPGTGG
Trigger: TCCTCCTGTTCCTGGCCGCCATGCTCTTTGTCCTCATGAACTGGTACTACAGGACTGTACACAAGAGGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR TCA 72 bp AGGCTTTTTGCACCATCCGCTGTGCAAAGAGCTTTTTaGGCCGCAGGTAATCCTCCAGGACCACCTTCAGCA +
Preference number: 3 (lower is better)
Translates to: RLFAPSAVQRAF*AAGNPPGPPSA
Trigger: TGCTGAAGGTGGTCCTGGAGGATTACCTGCGGCTCAAAAAGCTCTTTGCACAGCGGATGGTGCAAAAAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR GCA 72 bp TGCCAAATGGCAAAGGTTCCCTTTAGTCAAGTGAAATaGTCAGCCTACACCGGGGCCAAGACACTGTCCTGG +
Preference number: 3 (lower is better)
Translates to: CQMAKVPFSQVK*SAYTGAKTLSW
Trigger: CCAGGACAGTGTCTTGGCCCCGGTGTAGGCTGAGCATTTCACTTGACTAAAGGGAACCTTTGCCATTTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR GCA 72 bp TCAGAAGAGCACCTTCCTCTCTGCAGACCCCCTCGCTaGTGCTTGATGAAAGACTTCTGGTCAAGAGATGTG +
Preference number: 3 (lower is better)
Translates to: SEEHLPLCRPPR*CLMKDFWSRDV
Trigger: CACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCTGCAGAGAGGAAGGTGCTCTTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR-3UTR CAA 90 bp AGGACCCAACTAAACACACCCGTGGGCCCCCAGTTTGCAGCTTTGGTATTAGATTCCTCCCTAAGGGTTTaGTTCCTTCCTCCCTTCCTG +
Preference number: 3 (lower is better)
Translates to: RTQLNTPVGPQFAALVLDSSLRV*FLPPFL
Trigger: CAGGAAGGGAGGAAGGAACAAAACCCTTAGGGAGGA...ATCTAATACCAAAGCTGCAAACTGGGGGCCCACGGGTGTGTTTAGTTGGGTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR CAA 90 bp CCGAGGACAACCGCAGCCACTGTGACTACATGGAATCTACCAAGATGTAATGGGCCCAGCATGGAGAAGTaGCCAAATGGCAAAGGTTCC +
Preference number: 3 (lower is better)
Translates to: PRTTAATVTTWNLPRCNGPSMEK*PNGKGS
Trigger: GGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGG...CCCATTACATCTTGGTAGATTCCATGTAGTCACAGTGGCTGCGGTTGTCCTCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR-3UTR CAA 90 bp CGACAGAAGGGATCCAGCCACACAGGGTTGGCTCCATCAAAGGAGTACTTGTTGTTCCGTAGCTGCTCCTaGTTCTCATCGATCATCTGG +
Preference number: 3 (lower is better)
Translates to: RQKGSSHTGLAPSKEYLLFRSCS*FSSIIW
Trigger: CCAGATGATCGATGAGAACAAGGAGCAGCTACGGAA...CAACAAGTACTCCTTTGATGGAGCCAACCCTGTGTGGCTGGATCCCTTCTGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp TCTGCCTTTGAGCTTCTGTCTTGTTGCTGTTGCAGGAGCCATGAGCACAGAGGGTCAATCAGGAAGGGATaGAAGATGATCGAGGAGGCT +
Preference number: 3 (lower is better)
Translates to: SAFELLSCCCCRSHEHRGSIRKG*KMIEEA
Trigger: AGCCTCCTCGATCATCTTCAATCCCTTCCTGATTGA...CCCTCTGTGCTCATGGCTCCTGCAACAGCAACAAGACAGAAGCTCAAAGGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR CAA 90 bp CGACAGAAGGGATCCAGCCACACAGGGTTGGCTCCATCAAAGGAGTACTTGTTGTCAATGAGTGCAAAGTaGCCTGAGTCAGCATCAGTG +
Preference number: 3 (lower is better)
Translates to: RQKGSSHTGLAPSKEYLLSMSAK*PESASV
Trigger: CACTGATGCTGACTCAGGCAACTTTGCACTCATTGA...CAACAAGTACTCCTTTGATGGAGCCAACCCTGTGTGGCTGGATCCCTTCTGTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp GATTGGCCCCTCACGAATGATCTGGCCCAGCTTGGCAATGTTGTCATACTCCTGCCATCAAAGGAGTACTaGTTGGTGTTAGGCATGTCC +
Preference number: 3 (lower is better)
Translates to: DWPLTNDLAQLGNVVILLPSKEY*LVLGMS
Trigger: GGACATGCCTAACACCAACAAGTACTCCTTTGATGG...CAGGAGTATGACAACATTGCCAAGCTGGGCCAGATCATTCGTGAGGGGCCAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 72 bp AAACTGAAAGACCTGTCACCCACTAACTGTGGCTTATaGTTCACACACACCCACTCTGTGAAGCCCTCCTGC +
Preference number: 3 (lower is better)
Translates to: KLKDLSPTNCGL*FTHTHSVKPSC
Trigger: GCAGGAGGGCTTCACAGAGTGGGTGTGTGTGAAGCATAAGCCACAGTTAGTGGGTGACAGGTCTTTCAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR GCA 72 bp GATGTGGCCATGATGCTGTCCAGTTTAACAGTGCCTTaGCCCCATCCACATTCCCTAGGTAAGTCTTCCCTA +
Preference number: 3 (lower is better)
Translates to: DVAMMLSSLTVP*PHPHSLGKSSL
Trigger: TAGGGAAGACTTACCTAGGGAATGTGGATGGGGGCAAGGCACTGTTAAACTGGACAGCATCATGGCCACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR CCA 72 bp GGCAGCTGCGGCCTCTTACCATCCATAACTCGTTCCTaGCCACAGAGCAAGTTATTGACAGAGTTGGTCTTA +
Preference number: 3 (lower is better)
Translates to: GSCGLLPSITRS*PQSKLLTELVL
Trigger: TAAGACCAACTCTGTCAATAACTTGCTCTGTGGCCAGGAACGAGTTATGGATGGTAAGAGGCCGCAGCTGCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR CCA 72 bp GTCTGTATCAGCTTGATTGGCCCCTCACGAATGATCTaGCCCAGCTTGGCAATGTTGTCATACTCCTGGATG +
Preference number: 3 (lower is better)
Translates to: VCISLIGPSRMI*PSLAMLSYSWM
Trigger: CATCCAGGAGTATGACAACATTGCCAAGCTGGGCCAGATCATTCGTGAGGGGCCAATCAAGCTGATACAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647092.1
3UTR TCA 72 bp GAAGTTGCCAAATGGCAAAGGTTCCCTTTAGTCAAGTaGAATGCTCAGCCTACACCGGGGCCAAGACACTGT +
Preference number: 3 (lower is better)
Translates to: EVAKWQRFPLVK*NAQPTPGPRHC
Trigger: ACAGTGTCTTGGCCCCGGTGTAGGCTGAGCATTTCACTTGACTAAAGGGAACCTTTGCCATTTGGCAACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR TCA 72 bp CAAACTTGCTCTCTCCATCTCCAAGGCTGTACTCAATaGGTGCAAAGTTGCCTGAGTCAGCATCAGTGGCAG +
Preference number: 3 (lower is better)
Translates to: QTCSLHLQGCTQ*VQSCLSQHQWQ
Trigger: CTGCCACTGATGCTGACTCAGGCAACTTTGCACTCATTGAGTACAGCCTTGGAGATGGAGAGAGCAAGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp CTGCGGCCTCTTACCATCCATAACTCGTTCCTGGCCACAGAGCAAGTTATTGACCAGCATGGGTCCTTTTaGTCTATGTCTTCTCTTTCC +
Preference number: 3 (lower is better)
Translates to: LRPLTIHNSFLATEQVIDQHGSF*SMSSLS
Trigger: GGAAAGAGAAGACATAGACAAAAAGGACCCATGCTG...GTCAATAACTTGCTCTGTGGCCAGGAACGAGTTATGGATGGTAAGAGGCCGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR TCA 72 bp CCTAACACCACACTTGGCCATCTCAAGGACATTTTATaGCAAAGAGGAGAGTGCTGTGCACACAGAAGGAGC +
Preference number: 3 (lower is better)
Translates to: PNTTLGHLKDIL*QRGECCAHRRS
Trigger: GCTCCTTCTGTGTGCACAGCACTCTCCTCTTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
3UTR TCA 72 bp ATCTCCAAGGCTGTACTCAATGAGTGCAAAGTTGCCTaGGTCAGCATCAGTGGCAGTGACTGTCAGGATGAT +
Preference number: 3 (lower is better)
Translates to: ISKAVLNECKVA*VSISGSDCQDD
Trigger: ATCATCCTGACAGTCACTGCCACTGATGCTGACTCAGGCAACTTTGCACTCATTGAGTACAGCCTTGGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp AAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGATTGACATTGACTTTCTaGTCCACGTGGGGATGCCAC +
Preference number: 3 (lower is better)
Translates to: KPEGTSVTSVYKLGTHLGLTLTF*STWGCH
Trigger: GTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAA...TCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR TCA 72 bp TGGAGAAGCCCACTGTCCCTTCCTTCCAAGTCAATCTaGTCTCAAAAAGTGAGTCCGGCTTCACAAGAAACT +
Preference number: 3 (lower is better)
Translates to: WRSPLSLPSKSI*SQKVSPASQET
Trigger: AGTTTCTTGTGAAGCCGGACTCACTTTTTGAGATCAGATTGACTTGGAAGGAAGGGACAGTGGGCTTCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CCA 72 bp CTGCTCATCTGTACCCTCTGGTCATGTGTTATCTGCTaGCCAGGATCTGTGAGCATTTTTATTACAACCCCA +
Preference number: 3 (lower is better)
Translates to: LLICTLWSCVIC*PGSVSIFITTP
Trigger: TGGGGTTGTAATAAAAATGCTCACAGATCCTGGCCAGCAGATAACACATGACCAGAGGGTACAGATGAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR TCA 72 bp TGTCCCTTCCTTCCAAGTCAATCTGATCTCAAAAAGTaGGTCCGGCTTCACAAGAAACTTACCAAGAGGACC +
Preference number: 3 (lower is better)
Translates to: CPFLPSQSDLKK*VRLHKKLTKRT
Trigger: GGTCCTCTTGGTAAGTTTCTTGTGAAGCCGGACTCACTTTTTGAGATCAGATTGACTTGGAAGGAAGGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR CAA 90 bp AGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGCCAGTGAGAATGCTTGTTCATaGACATTGACTTTCTTGTCC +
Preference number: 3 (lower is better)
Translates to: REHQSLLFISWAHIWEASENACS*TLTFLS
Trigger: GGACAAGAAAGTCAATGTCAATGAACAAGCATTCTC...ACTGGCTTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR CCA 72 bp CATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTaGGAAGCCAGTGAAATGGAGAGAATGCTTGTTCAT +
Preference number: 3 (lower is better)
Translates to: HQSLLFISWAHI*EASEMERMLVH
Trigger: ATGAACAAGCATTCTCTCCATTTCACTGGCTTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp CAAGCCGGCCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCAGCACAGCTTCCGCCATaGCCGGCCCACCGTCCCTCG +
Preference number: 4 (lower is better)
Translates to: QAGRAGPEPPQGSRVHAPAQLPP*PAHRPS
Trigger: CGAGGGACGGTGGGCCGGCCATGGCGGAAGCTGTGC...TGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGGCCGGCTTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp CAAGCCGGCCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACGCAGGGCTCACGAGTaGATGCCCCACCACCCTGGG +
Preference number: 4 (lower is better)
Translates to: QAGRAGPEPPQGSRVHAPRRAHE*MPHHPG
Trigger: CCCAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCG...TGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGGCCGGCTTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CCGGCCCACCGTCCCTCGACAGCCCCTGCCGGGCCCCGAGGACAACCGCAGCCACGGTCCAGCATGGCGTaGGTGGTGCGGATCTTGCCC +
Preference number: 4 (lower is better)
Translates to: PAHRPSTAPAGPRGQPQPRSSMA*VVRILP
Trigger: GGGCAAGATCCGCACCACCCACGCCATGCTGGACCG...TGGCTGCGGTTGTCCTCGGGGCCCGGCAGGGGCTGTCGAGGGACGGTGGGCCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CCGGCCCACCGTCCCTCGACAGCCCCTGCCGGGCCCCGAGGACAACCGCAGCCAGTGCTGGCCCAGTGCTaGGGCAAAACCTCGGGGCTC +
Preference number: 4 (lower is better)
Translates to: PAHRPSTAPAGPRGQPQPVLAQC*GKTSGL
Trigger: GAGCCCCGAGGTTTTGCCCCAGCACTGGGCCAGCAC...TGGCTGCGGTTGTCCTCGGGGCCCGGCAGGGGCTGTCGAGGGACGGTGGGCCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp GACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGGGAGCCCCGCTCCCGGATCACTGTaGCGATACCGCGGGCGCTGT +
Preference number: 4 (lower is better)
Translates to: DPSRRRAHECMPHHPGSPAPGSL*RYRGRC
Trigger: ACAGCGCCCGCGGTATCGTCACAGTGATCCGGGAGC...GGGGCTCCCAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR TCA 90 bp CCGGCCCACCGTCCCTCGACAGCCCCTGCCGGGCCCCGAGGACAACCGCAGCCACCTGTGCCAGCTCAGTaGTGGCCACGCTGTACTCGG +
Preference number: 4 (lower is better)
Translates to: PAHRPSTAPAGPRGQPQPPVPAQ*WPRCTR
Trigger: CCGAGTACAGCGTGGCCATCACTGAGCTGGCACAGG...TGGCTGCGGTTGTCCTCGGGGCCCGGCAGGGGCTGTCGAGGGACGGTGGGCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGGACCGGCCCTGTCCCTaGCCTTGCTCCCTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWDRPCP*PCSLGG
Trigger: CCCTCCCAGGGAGCAAGGGCAGGGACAGGGCCGGTC...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp CCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGAGGGAGGACCTGGGCTaGCCAGCTCCTGTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: PRWTRAAAGLTSACPTTLREDLG*PAPVPV
Trigger: GACTGGGACAGGAGCTGGGCAGCCCAGGTCCTCCCT...CAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp GACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGGGAGCCCCCCAGCATGGCGTGGGTaGTGCGGATCTTGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: DPSRRRAHECMPHHPGSPPAWRG*CGSCPW
Trigger: CCACGGGCAAGATCCGCACCACCCACGCCATGCTGG...GGGGCTCCCAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTC
72% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR CAA 72 bp GTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTaGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: VRPAGDVRAGPP*RLLSRRGWCLR
Trigger: CCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp GACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGGGAGCCCCCCTGTCTGCTGTTCATaGCGCTCTGCAAGCCGGCCG +
Preference number: 4 (lower is better)
Translates to: DPSRRRAHECMPHHPGSPPVCCS*RSASRP
Trigger: CGGCCGGCTTGCAGAGCGTCATGAACAGCAGACAGG...GGGGCTCCCAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTC
71% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGGCCAAGCATCGCGCCTaGAGCCCGCGTCCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWAKHRA*SPRPSL
Trigger: GAGAGAGGGACGCGGGCTGCAGGCGCGATGCTTGGC...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTCGGTGGCCAGCAGCGTaGCCGTGCTGCCGTGCACCA +
Preference number: 4 (lower is better)
Translates to: WTGVGCPASRGCPRWASLRWPAA*PCCRAP
Trigger: TGGTGCACGGCAGCACGGGCACGCTGCTGGCCACCG...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp CCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGGACCGGCCCTGTCCCTaGCCTTGCTCCCTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: PPLRLLSRRGWCLRGGAGDRPCP*PCSLGG
Trigger: CCCTCCCAGGGAGCAAGGGCAGGGACAGGGCCGGTC...CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCGACCGGCCCTGTCCCTaGCCTTGCTCCCTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPDRPCP*PCSLGG
Trigger: CCCTCCCAGGGAGCAAGGGCAGGGACAGGGCCGGTC...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp CAAGCCGGCCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCAGGCCAGGGCGGGTGCTaGAAGATGCTGTGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: QAGRAGPEPPQGSRVHAPGQGGC*KMLWPS
Trigger: TGAAGGCCACAGCATCTTGCAGCACCCGCCCTGGCC...TGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGGCCGGCTTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466757.8
CDS-3UTR CCA 90 bp CCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGGGTCTCTCTGTCCAGTaGCTGCCGGAGCCACACCAC +
Preference number: 4 (lower is better)
Translates to: PRWTRAAAGLTSACPTTLGLSVQ*LPEPHH
Trigger: GTGGTGTGGCTCCGGCAGCCACTGGACAGAGAGACC...CAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp CCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGCGCGGGCGCTGTCAATaGCGAAGAATTGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: PRWTRAAAGLTSACPTTLRGRCQ*RRIGRG
Trigger: CCCCCTCCCAATTCTTCGCCATTGACAGCGCCCGCG...CAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp CAAGCCGGCCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACACCCGGAACTCGCGTaGCACGTCCTCGGACACAGA +
Preference number: 4 (lower is better)
Translates to: QAGRAGPEPPQGSRVHAPHPELA*HVLGHR
Trigger: TCTGTGTCCGAGGACGTGCCACGCGAGTTCCGGGTG...TGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGGCCGGCTTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp CCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGCCGTGGCTCCTGCCATaGTGTTCTCCACCACGGAGA +
Preference number: 4 (lower is better)
Translates to: PRWTRAAAGLTSACPTTLPWLLP*CSPPRR
Trigger: TCTCCGTGGTGGAGAACATCATGGCAGGAGCCACGG...CAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp GACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGGGAGCCCCCCGTGGCTCCTGCCATaGTGTTCTCCACCACGGAGA +
Preference number: 4 (lower is better)
Translates to: DPSRRRAHECMPHHPGSPPWLLP*CSPPRR
Trigger: TCTCCGTGGTGGAGAACATCATGGCAGGAGCCACGG...GGGGCTCCCAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp CAAGCCGGCCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCAGCAGAGACGTGGTGGTaGTTTCCCCTGAGCGGGCAT +
Preference number: 4 (lower is better)
Translates to: QAGRAGPEPPQGSRVHAPAETWW*FPLSGH
Trigger: ATGCCCGCTCAGGGGAAATCACCACCACGTCTCTGC...TGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGGCCGGCTTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACCCAGCTCGGTGGTGGTaGCCACCACGCCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHPARWW*PPRRCC
Trigger: GCAGCAGCGGCGTGGTGGTCACCACCACCGAGCTGG...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp GACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGGGAGCCCCCCAGCACATGGATGGTaGGCGTGCTGGTGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: DPSRRRAHECMPHHPGSPPAHGW*ACWWSS
Trigger: AGAGCTCCACCAGCACGCTCACCATCCATGTGCTGG...GGGGCTCCCAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp CAAGCCGGCCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCATTCTCCCCGCTACTCTaGAAGGCCCTTCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: QAGRAGPEPPQGSRVHAPFSPLL*KALLGG
Trigger: CCCACCCAGAAGGGCCTTTCAGAGTAGCGGGGAGAA...TGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGGCCGGCTTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp CCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGCGAACACGGTGGCTGTaGCCGTGTGTCGCTTCCCTA +
Preference number: 4 (lower is better)
Translates to: PRWTRAAAGLTSACPTTLRTRWL*PCVASL
Trigger: TAGGGAAGCGACACACGGGCACAGCCACCGTGTTCG...CAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTAGGCTGTACACCGCCTaGGACTCGCGGTCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: WTGVGCPASRGCPRWASLRLYTA*DSRSRR
Trigger: GCGCCTGGACCGCGAGTCGCAGGCGGTGTACAGCCT...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp AAGGCAGTGGCCTCGGCAGCGGTCAGCGTCTCCAGCGAGCGGCCCAGGCCCTTCGCAGCGTGCCCGTGCTaGCGTGCACCACATGGATCC +
Preference number: 4 (lower is better)
Translates to: KAVASAAVSVSSERPRPFAACPC*RAPHGS
Trigger: GGATCCATGTGGTGCACGGCAGCACGGGCACGCTGC...GAAGGGCCTGGGCCGCTCGCTGGAGACGCTGACCGCTGCCGAGGCCACTGCCTT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp CCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGCCGGAGGGGATGGTaGTTGCGGGGTGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: PPLRLLSRRGWCLRGGAGSRRGW*LRGGAG
Trigger: CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCT...CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp CAAGCCGGCCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCAATCCCACCACAAAGCTaGCCCACCCCCATCCTGCTG +
Preference number: 4 (lower is better)
Translates to: QAGRAGPEPPQGSRVHAPIPPQS*PTPILL
Trigger: CAGCAGGATGGGGGTGGGGCAGCTTTGTGGTGGGAT...TGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGGCCGGCTTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp CAAGCCGGCCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCAACCGGTGCTGCAGGCTaGAGGAAGACAGTGGCCCAA +
Preference number: 4 (lower is better)
Translates to: QAGRAGPEPPQGSRVHAPTGAAG*RKTVAQ
Trigger: TTGGGCCACTGTCTTCCTGCAGCCTGCAGCACCGGT...TGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGGCCGGCTTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCGCCACCACCCGCAGCTaGTACTCCGCGATGCGCTCG +
Preference number: 4 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPATTRS*YSAMRS
Trigger: CGAGCGCATCGCGGAGTACCAGCTGCGGGTGGTGGC...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGCGGTGGAGTCCACCTTaGGGCCGCCGTCATCTGCCA +
Preference number: 4 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWRWSPP*GRRHLP
Trigger: TGGCAGATGACGGCGGCCCCAAGGTGGACTCCACCG...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTCGTATGGCACTGGCTaGCCCAGGTCGCTGGCCACC +
Preference number: 4 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWSYGTG*PRSLAT
Trigger: GGTGGCCAGCGACCTGGGCCAGCCAGTGCCATACGA...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp AGTGGCCTCGGCAGCGGTCAGCGTCTCCAGCGAGCGGCCCAGGCCCTTCTGGTCACTCTGAGCCCACCTTaGCGTCGGTGGCCACCCCTG +
Preference number: 4 (lower is better)
Translates to: SGLGSGQRLQRAAQALLVTLSPP*RRWPPL
Trigger: CAGGGGTGGCCACCGACGCCAAGGTGGGCTCAGAGT...GACCAGAAGGGCCTGGGCCGCTCGCTGGAGACGCTGACCGCTGCCGAGGCCACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCCTGCCCTGGGCTGTaGTCTCCTGGCTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSPCPGL*SPGSSS
Trigger: GGACGAGGAGCCAGGAGACCACAGCCCAGGGCAGGG...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp AGTGGCCTCGGCAGCGGTCAGCGTCTCCAGCGAGCGGCCCAGGCCCTTCTGGTCCCTGGGAGGGGACGGTaGATGGGTGCTGCTCACACC +
Preference number: 4 (lower is better)
Translates to: SGLGSGQRLQRAAQALLVPGRGR*MGAAHT
Trigger: GGTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGG...GACCAGAAGGGCCTGGGCCGCTCGCTGGAGACGCTGACCGCTGCCGAGGCCACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGCCTGCCCTTGCTCCCTaGGAGGGGACGGTGGATGGG +
Preference number: 4 (lower is better)
Translates to: PPLRLLSRRGWCLRGGAGPALAP*EGTVDG
Trigger: CCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGG...CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTAGGGGATGTCCGCGCTaGGCCTCCCTTGCGCCTGCT +
Preference number: 4 (lower is better)
Translates to: WTGVGCPASRGCPRWASLRGCPR*ASLAPA
Trigger: AGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCT...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp CCGGCCCACCGTCCCTCGACAGCCCCTGCCGGGCCCCGAGGACAACCGCAGCCACTGGTTTGCTTCCCCTaGGGCCTCCCTGCAAATCCT +
Preference number: 4 (lower is better)
Translates to: PAHRPSTAPAGPRGQPQPLVCFP*GLPANP
Trigger: AGGATTTGCAGGGAGGCCCCAGGGGAAGCAAACCAG...TGGCTGCGGTTGTCCTCGGGGCCCGGCAGGGGCTGTCGAGGGACGGTGGGCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp CCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGCCAAGGAGTGAGCTCTaGCTTGCCACTCCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: PRWTRAAAGLTSACPTTLPRSEL*LATPQL
Trigger: GAGCTGGGGAGTGGCAAGCCAGAGCTCACTCCTTGG...CAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp CAAGCCGGCCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCAGCACTCGTGGTCATCTaGGCCTTTGGCCTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: QAGRAGPEPPQGSRVHAPALVVI*AFGLRL
Trigger: GAGCCTCAGGCCAAAGGCCCAGATGACCACGAGTGC...TGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGGCCGGCTTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCGCCGAGTCGGAGGTaGAGTCAAACCGGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSPPSRR*SQTGGC
Trigger: ACAGCCCCCGGTTTGACTTCACCTCCGACTCGGCGG...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCCTGCCCGTTGGGTCCTaGGTCTCGGTCATGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPLPVGS*VSVMGQ
Trigger: CTGGCCCATGACCGAGACTCAGGACCCAACGGGCAG...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCGAGGGTGCCGCGTGGTaGGTGCTCAGGCACTGTCAG +
Preference number: 4 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPEGAAW*VLRHCQ
Trigger: CTGACAGTGCCTGAGCACTCACCACGCGGCACCCTC...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CAAGCCGGCCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCAAGCCTTCCCAAGGAGTaGGCTCTGGCTTGTCACTCC +
Preference number: 4 (lower is better)
Translates to: QAGRAGPEPPQGSRVHAPSLPKE*ALACHS
Trigger: GGAGTGACAAGCCAGAGCTCACTCCTTGGGAAGGCT...TGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGGCCGGCTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTCCCCATGGCTCCGTGTaGGTGTGTGCAGCGGCGCCG +
Preference number: 4 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPPHGSV*VCAAAP
Trigger: CGGCGCCGCTGCACACACGCACACGGAGCCATGGGG...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCCGTTGCCCACGAGGGTaGCGCGTGGTGAGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPRCPRG*RVVSAQ
Trigger: CTGAGCACTCACCACGCGGCACCCTCGTGGGCAACG...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp CAAAGGCTGGGCCACGGCCTTGGCCCAGGCCCCACAGGACAGGAAGGGTGGTGGCCAGCAGCGTGCCCGTaGTGCCGTGCACCACATGGA +
Preference number: 4 (lower is better)
Translates to: QRLGHGLGPGPTGQEGWWPAACP*CRAPHG
Trigger: TCCATGTGGTGCACGGCAGCACGGGCACGCTGCTGG...CCACCACCCTTCCTGTCCTGTGGGGCCTGGGCCAAGGCCGTGGCCCAGCCTTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGGGGACGGTGGATGGGTaGTGCTCACACCCACAAGGC +
Preference number: 4 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWGTVDG*CSHPQG
Trigger: GCCTTGTGGGTGTGAGCAGCACCCATCCACCGTCCC...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp AAGGCAGTGGCCTCGGCAGCGGTCAGCGTCTCCAGCGAGCGGCCCAGGCCCTTCGGGACGGTGGATGGGTaGTGCTCACACCCACAAGGC +
Preference number: 4 (lower is better)
Translates to: KAVASAAVSVSSERPRPFGTVDG*CSHPQG
Trigger: GCCTTGTGGGTGTGAGCAGCACCCATCCACCGTCCC...GAAGGGCCTGGGCCGCTCGCTGGAGACGCTGACCGCTGCCGAGGCCACTGCCTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACAGCCGGAGGGGATGGTaGTTGCGGGGTGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHSRRGW*LRGGAG
Trigger: CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCT...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTGGCCTCCCTTGCGCCTaGTTAGCCGGAGGGGATGGT +
Preference number: 4 (lower is better)
Translates to: WTGVGCPASRGCPRWASLGLPCA*LAGGDG
Trigger: ACCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCC...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACGTGTGGTCCCAGGGGTaGCCCCCTCCAGGATCCGCT +
Preference number: 4 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHVWSQG*PPPGSA
Trigger: AGCGGATCCTGGAGGGGGCCACCCCTGGGACCACAC...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCGTGTGGTCCCAGGGGTaGCCCCCTCCAGGATCCGCT +
Preference number: 4 (lower is better)
Translates to: EQLMRAARAKPRLSPRPGVWSQG*PPPGSA
Trigger: AGCGGATCCTGGAGGGGGCCACCCCTGGGACCACAC...GCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGCAGCTGGACATACCCTaGGGGCACCAGGTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWQLDIP*GHQVQQ
Trigger: CTGCTGGACCTGGTGCCCCCAGGGTATGTCCAGCTG...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGGCAGTGGCCGCTGTGTaGTCACCAAGCCCGAGTCCA +
Preference number: 4 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWAVAAV*SPSPSP
Trigger: TGGACTCGGGCTTGGTGACCACACAGCGGCCACTGC...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp CAAAGGCTGGGCCACGGCCTTGGCCCAGGCCCCACAGGACAGGAAGGGTGGTGGAACCAGGTCGAGGGTTaGGGAGGGTCCACGGGGAGG +
Preference number: 4 (lower is better)
Translates to: QRLGHGLGPGPTGQEGWWNQVEG*GGSTGR
Trigger: CCTCCCCGTGGACCCTCCCCAACCCTCGACCTGGTT...CCACCACCCTTCCTGTCCTGTGGGGCCTGGGCCAAGGCCGTGGCCCAGCCTTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTACTCTGAGCCCACCTTaGCGTCGGTGGCCACCCCTG +
Preference number: 4 (lower is better)
Translates to: WTGVGCPASRGCPRWASLTLSPP*RRWPPL
Trigger: CAGGGGTGGCCACCGACGCCAAGGTGGGCTCAGAGT...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp CTGGGCCACGGCCTTGGCCCAGGCCCCACAGGACAGGAAGGGTGGTGGGGGTGTTCCACTGGTGGCTTGTaGCGGAAGCGCAGGCTACCC +
Preference number: 4 (lower is better)
Translates to: LGHGLGPGPTGQEGWWGCSTGGL*RKRRLP
Trigger: GGGTAGCCTGCGCTTCCGCCACAAGCCACCAGTGGA...ACACCCCCACCACCCTTCCTGTCCTGTGGGGCCTGGGCCAAGGCCGTGGCCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACCGGCCCAGGCCCTTCTaGTCTTCCTCGGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHRPRPF*SSSGRL
Trigger: CAGCCTGCCCGAGGAAGACCAGAAGGGCCTGGGCCG...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCCTGCCCTTGCTCCCTaGGAGGGGACGGTGGATGGG +
Preference number: 4 (lower is better)
Translates to: EQLMRAARAKPRLSPRPGPALAP*EGTVDG
Trigger: CCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGG...GCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGGTTGCGCCTGCTCCCTaGGCAAAGGAGCCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: PRWTRAAAGLTSACPTTLVAPAP*AKEPFL
Trigger: AAGAAAGGGCTCCTTTGCCCAGGGAGCAGGCGCAAC...CAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp CAAGCCGGCCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCAGCCAAGACACTGTCCTaGCATCTGTGCTGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: QAGRAGPEPPQGSRVHAPAKTLS*HLCWPS
Trigger: ACTGGGCCAGCACAGATGCCAGGACAGTGTCTTGGC...TGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGGCCGGCTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CCGGCCCACCGTCCCTCGACAGCCCCTGCCGGGCCCCGAGGACAACCGCAGCCAAGAGATGTGCACTCGTaGTCATCTGGGCCTTTGGCC +
Preference number: 4 (lower is better)
Translates to: PAHRPSTAPAGPRGQPQPRDVHS*SSGPLA
Trigger: GGCCAAAGGCCCAGATGACCACGAGTGCACATCTCT...TGGCTGCGGTTGTCCTCGGGGCCCGGCAGGGGCTGTCGAGGGACGGTGGGCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCGGCTCTGGAAGCGCCTaGGCTCCTTGCGCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: LSAPVTPGTLAEATDPLPGSGSA*APCASP
Trigger: GGGAGAGGCGCAAGGAGCCCAGGCGCTTCCAGAGCC...GGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CCGGCCCACCGTCCCTCGACAGCCCCTGCCGGGCCCCGAGGACAACCGCAGCCAGTCGTGGGAGCAAGTTaGACTGCATGGGGAAGCAGT +
Preference number: 4 (lower is better)
Translates to: PAHRPSTAPAGPRGQPQPVVGAS*TAWGSS
Trigger: ACTGCTTCCCCATGCAGTCCAACTTGCTCCCACGAC...TGGCTGCGGTTGTCCTCGGGGCCCGGCAGGGGCTGTCGAGGGACGGTGGGCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CAA 72 bp TGCCCGCCTCCTGGTCCCGATGCAGGGAGGGGAGCATaGCCAGCCTCCCACGCTTCTGTCCCTCCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: CPPPGPDAGRGA*PASHASVPPKP
Trigger: GGGCTTGGGAGGGACAGAAGCGTGGGAGGCTGGCAATGCTCCCCTCCCTGCATCGGGACCAGGAGGCGGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR TCA 90 bp CCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGCTCCACGGTGAACTCTaGCTTGGTCTCTCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: PRWTRAAAGLTSACPTTLLHGEL*LGLSVQ
Trigger: CTGGACAGAGAGACCAAGTCAGAGTTCACCGTGGAG...CAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR TCA 90 bp GACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGGGAGCCCCAGGTCAGCACTCCGCTaGTGTAGTCCAGGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: DPSRRRAHECMPHHPGSPRSALR*CSPGQR
Trigger: TCTTTGCCCTGGACTACATCAGCGGAGTGCTGACCT...GGGGCTCCCAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp CAAGCCGGCCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACGTTCTCGTACAGGCTaGTGTTGTACAGTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: QAGRAGPEPPQGSRVHAPRSRTG*CCTVAG
Trigger: GCCAGCCACTGTACAACATCAGCCTGTACGAGAACG...TGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGGCCGGCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACGGTGGGCCGTGCTGTTaGGCAGCCCGATGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHGGPCC*AARCPQ
Trigger: CTGAGGACATCGGGCTGCTCAACAGCACGGCCCACC...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp AAGGCAGTGGCCTCGGCAGCGGTCAGCGTCTCCAGCGAGCGGCCCAGGCCCTTCGGTCATCATCAGGCTTaGCAGCTGCTGGCTCACGCC +
Preference number: 4 (lower is better)
Translates to: KAVASAAVSVSSERPRPFGHHQA*QLLAHA
Trigger: GGCGTGAGCCAGCAGCTGTCAAGCCTGATGATGACC...GAAGGGCCTGGGCCGCTCGCTGGAGACGCTGACCGCTGCCGAGGCCACTGCCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp TGCAGTGTGAGGTCAGCAACCAGGTCGAGGGTTGGGGAGGGTCCACGGGGAGGTCCTCGGGCAGGCTGTTaGGGTCGGTGGCCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: CSVRSATRSRVGEGPRGGPRAGC*GRWPAA
Trigger: CGCTGCTGGCCACCGACCTCAACAGCCTGCCCGAGG...ACCTCCCCGTGGACCCTCCCCAACCCTCGACCTGGTTGCTGACCTCACACTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGTGGGATCTGAGCAGCTaGTGCGGGCTGCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRWDLSS*CGLPGP
Trigger: TGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCCCA...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCATGCCTGTTGCAGGAGCCATaGGCACAGAGGGCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: QLPSLPGPLQRQLTPSPCLLQEP*AQRAPA
Trigger: GGCTGGGGCCCTCTGTGCTCATGGCTCCTGCAACAG...GCATGGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp GAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGTGGGCGTGCCTaGATCACTGGCCACCACCCG +
Preference number: 4 (lower is better)
Translates to: EQLMRAARAKPRLSPRPGLGGRA*ITGHHP
Trigger: CGGGTGGTGGCCAGTGATGCAGGCACGCCCACCAAG...GCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCCTGCGCCCGACAGGATaGGGTAGTTCACCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPLRPTG*GSSPGH
Trigger: GTGGCCTGGTGAACTACCGCATCCTGTCGGGCGCAG...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp TGCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCCCGAGAGAGGAACGGTaGCCCGGTCGGTGGCCACCA +
Preference number: 4 (lower is better)
Translates to: CGVELGGRRACLASFSSAPREER*PGRWPP
Trigger: TGGTGGCCACCGACCGGGGCACCGTTCCTCTCTCGG...GGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTTCCTCCAGGGCCACCTaGAGCGGCTGCATAGTCTCG +
Preference number: 4 (lower is better)
Translates to: WTGVGCPASRGCPRWASLSSRAT*SGCIVS
Trigger: CGAGACTATGCAGCCGCTGCAGGTGGCCCTGGAGGA...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCGTGCCGCGTGGTGAGTaGTCAGGCACTGTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPVPRGE*SGTVSS
Trigger: GCTGCTGACAGTGCCTGAGCACTCACCACGCGGCAC...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTCTGCGCCTGTCACGTTaGCCACGAGGGTGCCGCGTG +
Preference number: 4 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLLRLSR*PRGCRV
Trigger: CACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAG...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGCGAAGGTGCGCAGAATaGCGTCCATGCTCCCCATGG +
Preference number: 4 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWRRCAE*RPCSPW
Trigger: CCATGGGGAGCATGGACGGCATTCTGCGCACCTTCG...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp GAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCGGTAGGTCATCCTCATaGTCCGCCTGGGCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: EQLMRAARAKPRLSPRPGGRSSS*SAWAAS
Trigger: GCTGGCCGCCCAGGCGGAGCATGAGGATGACCTACC...GCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp TTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGGGAGGGTAGGTCATCCTCATaGTCCGCCTGGGCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LRLLSRRGWCLRGGAGREGRSSS*SAWAAS
Trigger: GCTGGCCGCCCAGGCGGAGCATGAGGATGACCTACC...CTCCCTCCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCGTGCCCGTGCTGCCGTaGACCACATGGATCCCATCG +
Preference number: 4 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPVPVLP*TTWIPS
Trigger: CGATGGGATCCATGTGGTGCACGGCAGCACGGGCAC...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGCCAGCAGCGTGCCCGTaGTGCCGTGCACCACATGGA +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRPAACP*CRAPHG
Trigger: TCCATGTGGTGCACGGCAGCACGGGCACGCTGCTGG...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGATTCTGTGCGGGCGTTaGGCTCGAAGGCAGTGGCCT +
Preference number: 4 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWILCGR*ARRQWP
Trigger: AGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAAT...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp GGGGTGTGGATTTGGCGGATTCTGTGCGGGCGTTGCGCTCGAAGGCAGTGGCCTGACCGGCCCTGTCCCTaGCCTTGCTCCCTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: GVWIWRILCGRCARRQWPDRPCP*PCSLGG
Trigger: CCCTCCCAGGGAGCAAGGGCAGGGACAGGGCCGGTC...AGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAATCCACACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCGCAGCTGATGCGGGCTaGCAGGGCCAAGCCAAGGTT +
Preference number: 4 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPAADAG*QGQAKV
Trigger: AACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGC...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp TGCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCAGCCGGAGGGGATGGTaGTTGCGGGGTGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: CGVELGGRRACLASFSSASRRGW*LRGGAG
Trigger: CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCT...GGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GGATCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGGCGCTGGGCCTCCCTTaGGCCTGCTTAGCCGGAGGG +
Preference number: 4 (lower is better)
Translates to: GSEQLMRAARAKPRLSPRALGLP*ACLAGG
Trigger: CCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGC...CCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCCGGCTGCATTCAGTCTaGAAAGGCTGGGCCACGGCC +
Preference number: 4 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPRLHSV*KGWATA
Trigger: GGCCGTGGCCCAGCCTTTGCAGACTGAATGCAGCCG...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GAGGGTGGGGAGCTGGAGGTCAGTGCCCTGTCTACAGGGGGCAGCGGCTGCTCACCTTGCGCCTCTCCCTaGACAGCTTCCGCCATGGCC +
Preference number: 4 (lower is better)
Translates to: EGGELEVSALSTGGSGCSPCASP*TASAMA
Trigger: GGCCATGGCGGAAGCTGTGCAGGGAGAGGCGCAAGG...TGAGCAGCCGCTGCCCCCTGTAGACAGGGCACTGACCTCCAGCTCCCCACCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp CTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCAGCGCCTGGGCTCCTTaGGCCTCTCCCTGCACAGCT +
Preference number: 4 (lower is better)
Translates to: LSAPVTPGTLAEATDPLPSAWAP*ASPCTA
Trigger: AGCTGTGCAGGGAGAGGCGCAAGGAGCCCAGGCGCT...GGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCCAACATGGCGCCCCATaGCTCCGTGTGCGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPQHGAP*LRVRVC
Trigger: GCACACACGCACACGGAGCCATGGGGCGCCATGTTG...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp CCGGCCCACCGTCCCTCGACAGCCCCTGCCGGGCCCCGAGGACAACCGCAGCCATATTCCCTGAAACGATaGTGTAGCCAATGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: PAHRPSTAPAGPRGQPQPYSLKR*CSQCPG
Trigger: CCCGGGGCATTGGCTACACCATCGTTTCAGGGAATA...TGGCTGCGGTTGTCCTCGGGGCCCGGCAGGGGCTGTCGAGGGACGGTGGGCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp GACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGGGAGCCCCGTCAGGATGAAGCCATaGCTGTACAGGGGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: DPSRRRAHECMPHHPGSPVRMKP*LYRGFS
Trigger: GGAGAACCCCCTGTACAGCCATGGCTTCATCCTGAC...GGGGCTCCCAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CCGGCCCACCGTCCCTCGACAGCCCCTGCCGGGCCCCGAGGACAACCGCAGCCACGTAGTCCAGTGGGATaGCCACCCGAATACGAATGT +
Preference number: 4 (lower is better)
Translates to: PAHRPSTAPAGPRGQPQPRSPVG*PPEYEC
Trigger: ACATTCGTATTCGGGTGGCCATCCCACTGGACTACG...TGGCTGCGGTTGTCCTCGGGGCCCGGCAGGGGCTGTCGAGGGACGGTGGGCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCATGCCCAGCATGGCGTGGGTaGTGCGGATCTTGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: QLPSLPGPLQRQLTPSPCPAWRG*CGSCPW
Trigger: CCACGGGCAAGATCCGCACCACCCACGCCATGCTGG...GCATGGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp GACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGGGAGCCCCCCTCATCGAGGTCGATaGCCACCACTTGGTAGATGG +
Preference number: 4 (lower is better)
Translates to: DPSRRRAHECMPHHPGSPPHRGR*PPLGRW
Trigger: CCATCTACCAAGTGGTGGCCATCGACCTCGATGAGG...GGGGCTCCCAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp TTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGGGAGGCATGTAGGCGGCTGTaGTCTCCCGGTCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: LRLLSRRGWCLRGGAGREACRRL*SPGPGP
Trigger: TGGGCCTGGACCGGGAGACCACAGCCGCCTACATGC...CTCCCTCCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGTGGCCGACAGGGTTaGGGTGCCCTCGTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLGGRQG*GALVLH
Trigger: GTGGAGGACGAGGGCACCCCAACCCTGTCGGCCACC...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCGCAGCAGCTCCAGGATaGGTGGCGAGAATGCCTCCC +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSAAAPG*VARMPP
Trigger: GGGAGGCATTCTCGCCACCCATCCTGGAGCTGCTGC...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp CCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGGAGGAGTCCTCCAGCTaGACATACCCTGGGGGCACC +
Preference number: 4 (lower is better)
Translates to: PPLRLLSRRGWCLRGGAGEESSS*TYPGGT
Trigger: GGTGCCCCCAGGGTATGTCCAGCTGGAGGACTCCTC...CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTGCAGTGGCCGCTGTGTaGTCACCAAGCCCGAGTCCA +
Preference number: 4 (lower is better)
Translates to: WTGVGCPASRGCPRWASLAVAAV*SPSPSP
Trigger: TGGACTCGGGCTTGGTGACCACACAGCGGCCACTGC...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp CCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGGATGGTGCCGTTGGGTaGGCGCACAAAGACAGGGCG +
Preference number: 4 (lower is better)
Translates to: PPLRLLSRRGWCLRGGAGDGAVG*AHKDRA
Trigger: CGCCCTGTCTTTGTGCGCCCACCCAACGGCACCATC...CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp CAAAGGCTGGGCCACGGCCTTGGCCCAGGCCCCACAGGACAGGAAGGGTGGTGGGATGGTGCCGTTGGGTaGGCGCACAAAGACAGGGCG +
Preference number: 4 (lower is better)
Translates to: QRLGHGLGPGPTGQEGWWDGAVG*AHKDRA
Trigger: CGCCCTGTCTTTGTGCGCCCACCCAACGGCACCATC...CCACCACCCTTCCTGTCCTGTGGGGCCTGGGCCAAGGCCGTGGCCCAGCCTTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGTCTCGTATGGCACTaGCTGGCCCAGGTCGCTGGC +
Preference number: 4 (lower is better)
Translates to: PPLRLLSRRGWCLRGGAGSLVWH*LAQVAG
Trigger: GCCAGCGACCTGGGCCAGCCAGTGCCATACGAGACT...CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACAACCAGGTCGAGGGTTaGGGAGGGTCCACGGGGAGG +
Preference number: 4 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHNQVEG*GGSTGR
Trigger: CCTCCCCGTGGACCCTCCCCAACCCTCGACCTGGTT...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCTTCCATGGGTGCGCGTaGGGCTGTTCCACAGGTCGG +
Preference number: 4 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPFHGCA*GCSTGR
Trigger: CCGACCTGTGGAACAGCCCCACGCGCACCCATGGAA...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCAGGCTACCCTGCCCTaGGCTGTGGTCTCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: EQLMRAARAKPRLSPRPGQATLP*AVVSWL
Trigger: GAGCCAGGAGACCACAGCCCAGGGCAGGGTAGCCTG...GCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTTCCACTGGTGGCTTGTaGCGGAAGCGCAGGCTACCC +
Preference number: 4 (lower is better)
Translates to: WTGVGCPASRGCPRWASLSTGGL*RKRRLP
Trigger: GGGTAGCCTGCGCTTCCGCCACAAGCCACCAGTGGA...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCCCTTGAGCTCCACTaGTGGCTTGTGGCGGAAGCG +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSPLELH*WLVAEA
Trigger: CGCTTCCGCCACAAGCCACCAGTGGAGCTCAAGGGG...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGCTGCCGTGCACCACATaGATCCCATCGGGCCCCTTG +
Preference number: 4 (lower is better)
Translates to: PPLRLLSRRGWCLRGGAGLPCTT*IPSGPL
Trigger: CAAGGGGCCCGATGGGATCCATGTGGTGCACGGCAG...CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTCGGCCCAGGCCCTTCTaGTCTTCCTCGGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPRPRPF*SSSGRL
Trigger: CAGCCTGCCCGAGGAAGACCAGAAGGGCCTGGGCCG...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TGCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCCGGCCCAGGCCCTTCTaGTCTTCCTCGGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: CGVELGGRRACLASFSSARPRPF*SSSGRL
Trigger: CAGCCTGCCCGAGGAAGACCAGAAGGGCCTGGGCCG...GGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTGGAGGGGACGGTGGATaGGTGCTGCTCACACCCACA +
Preference number: 4 (lower is better)
Translates to: WTGVGCPASRGCPRWASLGGDGG*VLLTPT
Trigger: TGTGGGTGTGAGCAGCACCCATCCACCGTCCCCTCC...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR CAA 72 bp TGGATCCCATCGGGCCCCTTGAGCTCCACTGGTGGCTaGTGGCGGAAGCGCAGGCTACCCTGCCCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: WIPSGPLSSTGG*WRKRRLPCPGL
Trigger: CAGCCCAGGGCAGGGTAGCCTGCGCTTCCGCCACAAGCCACCAGTGGAGCTCAAGGGGCCCGATGGGATCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CAAGCCGGCCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCATGTACTCGGAGCTGTTaGACTCCGGGGCATTGTCAT +
Preference number: 4 (lower is better)
Translates to: QAGRAGPEPPQGSRVHAPCTRSC*TPGHCH
Trigger: ATGACAATGCCCCGGAGTTCAACAGCTCCGAGTACA...TGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGGCCGGCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp GACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGGGAGCCCCCAGCATCCATGGCCATaGCCGTCAGATAAATCAGCC +
Preference number: 4 (lower is better)
Translates to: DPSRRRAHECMPHHPGSPQHPWP*PSDKSA
Trigger: GGCTGATTTATCTGACGGTCATGGCCATGGATGCTG...GGGGCTCCCAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp CAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCATGCCCCCTGAGCGGGCATTaGTCCGAAACTGGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: QLPSLPGPLQRQLTPSPCPLSGH*SETGWS
Trigger: GCTCCACCCAGTTTCGGATCAATGCCCGCTCAGGGG...GCATGGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTGCAGAGACGTGGTGGTaGTTTCCCCTGAGCGGGCAT +
Preference number: 4 (lower is better)
Translates to: WTGVGCPASRGCPRWASLAETWW*FPLSGH
Trigger: ATGCCCGCTCAGGGGAAATCACCACCACGTCTCTGC...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp CCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGCCACTGCGCGAACGATaGGGATGTATTCAGACTTGG +
Preference number: 4 (lower is better)
Translates to: PRWTRAAAGLTSACPTTLPLRER*GCIQTW
Trigger: CCAAGTCTGAATACATCCTCATCGTTCGCGCAGTGG...CAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCCGGGGACCCGTTGTCTaGGGCCCTCACGGTAAAGTT +
Preference number: 4 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPRGPVV*GPHGKV
Trigger: AACTTTACCGTGAGGGCCTCAGACAACGGGTCCCCG...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCGCACCTCCTGCAGTGTaGGGTCAGCAACCAGGTCGA +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSAPPAV*GQQPGR
Trigger: TCGACCTGGTTGCTGACCTCACACTGCAGGAGGTGC...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCCACCTGGATCAACTCTaGGCCCACCTTGGCGTCGGT +
Preference number: 4 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPHLDQL*AHLGVG
Trigger: ACCGACGCCAAGGTGGGCTCAGAGTTGATCCAGGTG...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp GAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCGGGGCTGTAGGCCATaGAGAGGTCGAAGGTGCGCA +
Preference number: 4 (lower is better)
Translates to: EQLMRAARAKPRLSPRPGRGCRP*RGRRCA
Trigger: TGCGCACCTTCGACCTCTTCATGGCCTACAGCCCCG...GCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CAAAGGCTGGGCCACGGCCTTGGCCCAGGCCCCACAGGACAGGAAGGGTGGTGGTGGAGAGCAGGTGGATaGACTCCTCCTCGAAGCCGC +
Preference number: 4 (lower is better)
Translates to: QRLGHGLGPGPTGQEGWWWRAGG*TPPRSR
Trigger: GCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCA...CCACCACCCTTCCTGTCCTGTGGGGCCTGGGCCAAGGCCGTGGCCCAGCCTTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGGCCACGATTCCCAGCTaGGCCAGCCACAATGGCCTT +
Preference number: 4 (lower is better)
Translates to: PPLRLLSRRGWCLRGGAGATIPS*ASHNGL
Trigger: AAGGCCATTGTGGCTGGCTCAGCTGGGAATCGTGGC...CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp AAGGCAGTGGCCTCGGCAGCGGTCAGCGTCTCCAGCGAGCGGCCCAGGCCCTTCTTGGCCCCTCACGAATaGTCTGGCCCAGCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: KAVASAAVSVSSERPRPFLAPHE*SGPAWQ
Trigger: TTGCCAAGCTGGGCCAGATCATTCGTGAGGGGCCAA...GAAGGGCCTGGGCCGCTCGCTGGAGACGCTGACCGCTGCCGAGGCCACTGCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGCCTCGGGCAGGCTGTTaGGGTCGGTGGCCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: WEGGGPVWPLSAQPEPSWPRAGC*GRWPAA
Trigger: CGCTGCTGGCCACCGACCTCAACAGCCTGCCCGAGG...CCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCATGCCGTCTCCCCAAGGAGTaGGCTCTGGCTTGCCACTCC +
Preference number: 4 (lower is better)
Translates to: QLPSLPGPLQRQLTPSPCRLPKE*ALACHS
Trigger: GGAGTGGCAAGCCAGAGCTCACTCCTTGGGGAGACG...GCATGGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR TCA 90 bp CCGGCCCACCGTCCCTCGACAGCCCCTGCCGGGCCCCGAGGACAACCGCAGCCAGCCCTTTCCCAAAGATaGTCCTCAGAAGAGCACCTT +
Preference number: 4 (lower is better)
Translates to: PAHRPSTAPAGPRGQPQPALSQR*SSEEHL
Trigger: AAGGTGCTCTTCTGAGGATCATCTTTGGGAAAGGGC...TGGCTGCGGTTGTCCTCGGGGCCCGGCAGGGGCTGTCGAGGGACGGTGGGCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACCCACCTGCCCATTGCTaGCAGCATCAGGGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHPPAHC*QHQGPR
Trigger: CCTGGGACCCTGATGCTGGCAGCAATGGGCAGGTGG...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp GAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCTCCTCCAGGGCCACCTaGAGCGGCTGCATAGTCTCG +
Preference number: 4 (lower is better)
Translates to: EQLMRAARAKPRLSPRPGSSRAT*SGCIVS
Trigger: CGAGACTATGCAGCCGCTGCAGGTGGCCCTGGAGGA...GCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCGTGCCGCGTGGTGAGTaGTCAGGCACTGTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: EQLMRAARAKPRLSPRPGVPRGE*SGTVSS
Trigger: GCTGCTGACAGTGCCTGAGCACTCACCACGCGGCAC...GCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp CCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGGTCGGTGGCCACCCCTaGAGTGTACTCAGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: PPLRLLSRRGWCLRGGAGVGGHP*SVLSLG
Trigger: ACCAAGGCTGAGTACACTGCAGGGGTGGCCACCGAC...CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTCGTGTCGTTGTGGCCTaGCAGGTCTCGGGCCACAAT +
Preference number: 4 (lower is better)
Translates to: WTGVGCPASRGCPRWASLRVVVA*QVSGHN
Trigger: ATTGTGGCCCGAGACCTGGCAGGCCACAACGACACG...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp TGCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCGGTAGGTCATCCTCATaGTCCGCCTGGGCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: CGVELGGRRACLASFSSAGRSSS*SAWAAS
Trigger: GCTGGCCGCCCAGGCGGAGCATGAGGATGACCTACC...GGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGTGCTCAGGCACTGTCAGCAGCGGTAGGTCATCCTCATaGTCCGCCTGGGCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: VTLPTRVPRGECSGTVSSGRSSS*SAWAAS
Trigger: GCTGGCCGCCCAGGCGGAGCATGAGGATGACCTACC...GCTGCTGACAGTGCCTGAGCACTCACCACGCGGCACCCTCGTGGGCAACGTGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp TTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGGGAGAAGCGCAGGCTACCCTaGCCTGGGCTGTGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: LRLLSRRGWCLRGGAGREKRRLP*PGLWSP
Trigger: AGGAGACCACAGCCCAGGGCAGGGTAGCCTGCGCTT...CTCCCTCCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGCAGCGTGCCCGTGCTaGCGTGCACCACATGGATCC +
Preference number: 4 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLAACPC*RAPHGS
Trigger: GGATCCATGTGGTGCACGGCAGCACGGGCACGCTGC...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCGGGACGGTGGATGGGTaGTGCTCACACCCACAAGGC +
Preference number: 4 (lower is better)
Translates to: EQLMRAARAKPRLSPRPGGTVDG*CSHPQG
Trigger: GCCTTGTGGGTGTGAGCAGCACCCATCCACCGTCCC...GCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp TCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTAGCCGGAGGGGATGGTaGTTGCGGGGTGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: SEQLMRAARAKPRLSPRPSRRGW*LRGGAG
Trigger: CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCT...AGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGGCGCTGGGCCTCCCTTaGGCCTGCTTAGCCGGAGGG +
Preference number: 4 (lower is better)
Translates to: WEGGGPVWPLSAQPEPSWALGLP*ACLAGG
Trigger: CCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGC...CCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp CCCTCGCCTTTCTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGCGCAGGGCTCACGAGTaGATGCCCCACCACCCTGGG +
Preference number: 4 (lower is better)
Translates to: PSPFSQLPSLPGPLQRQLRRAHE*MPHHPG
Trigger: CCCAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCG...CAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAGAAAGGCGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCCTGTGGCACTGCTGGTaGCTTTCAGAGGGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: LSAPVTPGTLAEATDPLPLWHCW*LSEGAC
Trigger: GCAGGCCCCCTCTGAAAGCCACCAGCAGTGCCACAG...GGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGTTCACATCCAGCACATaGATGGTGAGCGTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: PRWTRAAAGLTSACPTTLFTSST*MVSVLV
Trigger: CACCAGCACGCTCACCATCCATGTGCTGGATGTGAA...CAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCTTGAAGGGCGGGGCCTaGTCAGTGGCCGACACATTC +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSLKGGA*SVADTF
Trigger: GAATGTGTCGGCCACTGACCAGGCCCCGCCCTTCAA...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCGGTCCACCAGGCCCTaGACTGTGATCACACCCGTG +
Preference number: 4 (lower is better)
Translates to: EQLMRAARAKPRLSPRPGRSTRP*TVITPV
Trigger: CACGGGTGTGATCACAGTCCAGGGCCTGGTGGACCG...GCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTGTGGTCCTTCTTCCGTaGAGGGGTGCCTCGGTCAGA +
Preference number: 4 (lower is better)
Translates to: WTGVGCPASRGCPRWASLVVLLP*RGASVR
Trigger: TCTGACCGAGGCACCCCTCCACGGAAGAAGGACCAC...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCGCAAAGGCGTCCTCCTaGTTGGGCACCAGGCGATCA +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSAKASS*LGTRRS
Trigger: TGATCGCCTGGTGCCCAACCAGGAGGACGCCTTTGC...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp TGCAGTGTGAGGTCAGCAACCAGGTCGAGGGTTGGGGAGGGTCCACGGGGAGGTGTGTGGTCCCAGGGGTaGCCCCCTCCAGGATCCGCT +
Preference number: 4 (lower is better)
Translates to: CSVRSATRSRVGEGPRGGVWSQG*PPPGSA
Trigger: AGCGGATCCTGGAGGGGGCCACCCCTGGGACCACAC...ACCTCCCCGTGGACCCTCCCCAACCCTCGACCTGGTTGCTGACCTCACACTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GCGCCTGTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGTGCTCAGGCACTGTCCAGCTGGACATACCCTaGGGGCACCAGGTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: APVTLPTRVPRGECSGTVQLDIP*GHQVQQ
Trigger: CTGCTGGACCTGGTGCCCCCAGGGTATGTCCAGCTG...GACAGTGCCTGAGCACTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CAAAGGCTGGGCCACGGCCTTGGCCCAGGCCCCACAGGACAGGAAGGGTGGTGGGAGTCCATGTCCACATaGAAGGCCTCCACGCCAGGG +
Preference number: 4 (lower is better)
Translates to: QRLGHGLGPGPTGQEGWWESMST*KASTPG
Trigger: CCCTGGCGTGGAGGCCTTCCATGTGGACATGGACTC...CCACCACCCTTCCTGTCCTGTGGGGCCTGGGCCAAGGCCGTGGCCCAGCCTTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGGGAGGGTGGTGCCCCAGAGTaGGGGCTCTCCACCATCTGT +
Preference number: 4 (lower is better)
Translates to: LRLLSRRGWCLRGGAGREGGAPE*GLSTIC
Trigger: ACAGATGGTGGAGAGCCCCCACTCTGGGGCACCACC...CTCCCTCCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACGATGGTGCCGTTGGGTaGGCGCACAAAGACAGGGCG +
Preference number: 4 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHDGAVG*AHKDRA
Trigger: CGCCCTGTCTTTGTGCGCCCACCCAACGGCACCATC...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTGGAGGATGGTGCCGTTaGGTGGGCGCACAAAGACAG +
Preference number: 4 (lower is better)
Translates to: WTGVGCPASRGCPRWASLGGWCR*VGAQRQ
Trigger: CTGTCTTTGTGCGCCCACCCAACGGCACCATCCTCC...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp CAAAGGCTGGGCCACGGCCTTGGCCCAGGCCCCACAGGACAGGAAGGGTGGTGGGGAGGATGGTGCCGTTaGGTGGGCGCACAAAGACAG +
Preference number: 4 (lower is better)
Translates to: QRLGHGLGPGPTGQEGWWGGWCR*VGAQRQ
Trigger: CTGTCTTTGTGCGCCCACCCAACGGCACCATCCTCC...CCACCACCCTTCCTGTCCTGTGGGGCCTGGGCCAAGGCCGTGGCCCAGCCTTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CCTCCTCCTCCTCCTCCTCCTCCTCTTCCTACTCTCGCTCCCTGTCCCCCAGGCTCGTATGGCACTGGCTaGCCCAGGTCGCTGGCCACC +
Preference number: 4 (lower is better)
Translates to: PPPPPPPPLPTLAPCPPGSYGTG*PRSLAT
Trigger: GGTGGCCAGCGACCTGGGCCAGCCAGTGCCATACGA...GCCTGGGGGACAGGGAGCGAGAGTAGGAAGAGGAGGAGGAGGAGGAGGAGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGCCACCTTGGCGTCGGTaGCCACCCCTGCAGTGTACT +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRPPWRR*PPLQCT
Trigger: AGTACACTGCAGGGGTGGCCACCGACGCCAAGGTGG...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACGCAGCCGGACAGAGATaGCAGGCTGCACGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHAAGQR*QAARPG
Trigger: TCCTGGACGTGCAGCCTGCCATCTCTGTCCGGCTGC...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACTTCCATGGGTGCGCGTaGGGCTGTTCCACAGGTCGG +
Preference number: 4 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHFHGCA*GCSTGR
Trigger: CCGACCTGTGGAACAGCCCCACGCGCACCCATGGAA...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGCCCTGCCCTGGGCTGTaGTCTCCTGGCTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQPCPGL*SPGSSS
Trigger: GGACGAGGAGCCAGGAGACCACAGCCCAGGGCAGGG...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGGAGGGGACGGTGGATaGGTGCTGCTCACACCCACA +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRGGDGG*VLLTPT
Trigger: TGTGGGTGTGAGCAGCACCCATCCACCGTCCCCTCC...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCGGAGGGGACGGTGGATaGGTGCTGCTCACACCCACA +
Preference number: 4 (lower is better)
Translates to: EQLMRAARAKPRLSPRPGGGDGG*VLLTPT
Trigger: TGTGGGTGTGAGCAGCACCCATCCACCGTCCCCTCC...GCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGCAGCCTGAGCCAAGCTaGTCCCCAGACTCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRQPEPS*SPDSWA
Trigger: GGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTG...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GAGGGTGGGGAGCTGGAGGTCAGTGCCCTGTCTACAGGGGGCAGCGGCTGCTCACGGGGCTCTCTTCCTTaGGTTTCCCGGGTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: EGGELEVSALSTGGSGCSRGSLP*VSRVLP
Trigger: TGGCAGCACCCGGGAAACCCAAGGAAGAGAGCCCCG...TGAGCAGCCGCTGCCCCCTGTAGACAGGGCACTGACCTCCAGCTCCCCACCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp GGGCACAGGGTGGAACAGGAAGAGGGCCTGAGCTTGGGCCCAGCTCCATCACTGGGCTCTGGAAGCGCCTaGGCTCCTTGCGCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: GHRVEQEEGLSLGPAPSLGSGSA*APCASP
Trigger: GGGAGAGGCGCAAGGAGCCCAGGCGCTTCCAGAGCC...CAGTGATGGAGCTGGGCCCAAGCTCAGGCCCTCTTCCTGTTCCACCCTGTGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CCGGCCCACCGTCCCTCGACAGCCCCTGCCGGGCCCCGAGGACAACCGCAGCCAGCAAGTTGGACTGCATaGGGAAGCAGTCACAGGAAT +
Preference number: 4 (lower is better)
Translates to: PAHRPSTAPAGPRGQPQPASWTA*GSSHRN
Trigger: ATTCCTGTGACTGCTTCCCCATGCAGTCCAACTTGC...TGGCTGCGGTTGTCCTCGGGGCCCGGCAGGGGCTGTCGAGGGACGGTGGGCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CAA 72 bp TTGGGGCCCTCATCTGCATCCACTGCGCCTGTCACGTaGCCCACGAGGGTGCCGCGTGGTGAGTGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: LGPSSASTAPVT*PTRVPRGECSG
Trigger: GCCTGAGCACTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCAGATGAGGGCCCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CAA 72 bp GTGCTGCCGTGCACCACATGGATCCCATCGGGCCCCTaGAGCTCCACTGGTGGCTTGTGGCGGAAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: VLPCTTWIPSGP*SSTGGLWRKRR
Trigger: CCTGCGCTTCCGCCACAAGCCACCAGTGGAGCTCAAGGGGCCCGATGGGATCCATGTGGTGCACGGCAGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CAA 72 bp TGCAGGGGTGTGGATTTGGCGGATTCTGTGCGGGCGTaGCGCTCGAAGGCAGTGGCCTCGGCAGCGGTCAGC +
Preference number: 4 (lower is better)
Translates to: CRGVDLADSVRA*RSKAVASAAVS
Trigger: GCTGACCGCTGCCGAGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAATCCACACCCCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp GGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTCCGGCCAGCATGCCCAGGCCGGGCTaGCTAGCCCCGACCACCTCA +
Preference number: 4 (lower is better)
Translates to: GMWRKCSETWTGVGCPASMPRPG*LAPTTS
Trigger: TGAGGTGGTCGGGGCTAGTCAGCCCGGCCTGGGCAT...GCTGGCCGGACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp GATGCTCCCCGTCCCTGCAACCAACAGGTTCAGGAGGTCCCCAGGGAGCCAGTCGCTCCCGGATCACTGTaGCGATACCGCGGGCGCTGT +
Preference number: 4 (lower is better)
Translates to: DAPRPCNQQVQEVPREPVAPGSL*RYRGRC
Trigger: ACAGCGCCCGCGGTATCGTCACAGTGATCCGGGAGC...GACTGGCTCCCTGGGGACCTCCTGAACCTGTTGGTTGCAGGGACGGGGAGCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR TCA 90 bp GATGAGGCCACATTCCTCCAAGTCACTGCTCTGTCACCCAGACTTGGGGCGGGGCCAGCTCGGTGGTGGTaGCCACCACGCCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: DEATFLQVTALSPRLGAGPARWW*PPRRCC
Trigger: GCAGCAGCGGCGTGGTGGTCACCACCACCGAGCTGG...CCCCGCCCCAAGTCTGGGTGACAGAGCAGTGACTTGGAGGAATGTGGCCTCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR TCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGCCAGCACATGGATGGTaGGCGTGCTGGTGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRPAHGW*ACWWSS
Trigger: AGAGCTCCACCAGCACGCTCACCATCCATGTGCTGG...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTTGGCGATCTCACCGCTaGTGCGGTCCATGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPWRSHR*CGPCGR
Trigger: CCTTCCGCATGGACCGCATCAGCGGTGAGATCGCCA...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCGGCTGGCCCTCAGTaGCTTCAAATGGTCCCTCAT +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSPAGPQ*LQMVPH
Trigger: ATGAGGGACCATTTGAAGTCACTGAGGGCCAGCCGG...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGGTCAATGATGACACCTaGCCTCACGGTCACCACACC +
Preference number: 4 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWVNDDT*PHGHHT
Trigger: GGTGTGGTGACCGTGAGGTCAGGTGTCATCATTGAC...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCATGAGGAAGCGGTCCTaGGCCCCAGCTTCTATTCGG +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSMRKRS*APASIR
Trigger: CCGAATAGAAGCTGGGGCTCAGGACCGCTTCCTCAT...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGCGGGGCGGGAGTCATTaGTGTCATCGATCAGAATGG +
Preference number: 4 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWRGGSH*CHRSEW
Trigger: CCATTCTGATCGATGACATCAATGACTCCCGCCCCG...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACCTGTCCGGTTGGCAATaGCCTTCCCTGCCGAGGAGT +
Preference number: 4 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHLSGWQ*PSLPRS
Trigger: ACTCCTCGGCAGGGAAGGTCATTGCCAACCGGACAG...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGCTGTCCGGTTGGCAATaGCCTTCCCTGCCGAGGAGT +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRLSGWQ*PSLPRS
Trigger: ACTCCTCGGCAGGGAAGGTCATTGCCAACCGGACAG...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACCGGGGACCCGTTGTCTaGGGCCCTCACGGTAAAGTT +
Preference number: 4 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHRGPVV*GPHGKV
Trigger: AACTTTACCGTGAGGGCCTCAGACAACGGGTCCCCG...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGGAGGGTGCCGCGTGGTaGGTGCTCAGGCACTGTCAG +
Preference number: 4 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQEGAAW*VLRHCQ
Trigger: CTGACAGTGCCTGAGCACTCACCACGCGGCACCCTC...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CGGCGATCTCACTCAGGTTCTCCGGTAGGTCATCCTCATGCTCCGCCTGGGCGGGAGGGTGCCGCGTGGTaGGTGCTCAGGCACTGTCAG +
Preference number: 4 (lower is better)
Translates to: RRSHSGSPVGHPHAPPGREGAAW*VLRHCQ
Trigger: CTGACAGTGCCTGAGCACTCACCACGCGGCACCCTC...CCGCCCAGGCGGAGCATGAGGATGACCTACCGGAGAACCTGAGTGAGATCGCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGGGATGTAGATGCCGATaGTGGCCGTGTCGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: PPLRLLSRRGWCLRGGAGGCRCR*WPCRCG
Trigger: GCCACAACGACACGGCCATCATCGGCATCTACATCC...CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp TTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGGGAGGCCACGATTCCCAGCTaGGCCAGCCACAATGGCCTT +
Preference number: 4 (lower is better)
Translates to: LRLLSRRGWCLRGGAGREATIPS*ASHNGL
Trigger: AAGGCCATTGTGGCTGGCTCAGCTGGGAATCGTGGC...CTCCCTCCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp TTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGGGAGGGTCATCATCAGGCTTaGCAGCTGCTGGCTCACGCC +
Preference number: 4 (lower is better)
Translates to: LRLLSRRGWCLRGGAGREGHHQA*QLLAHA
Trigger: GGCGTGAGCCAGCAGCTGTCAAGCCTGATGATGACC...CTCCCTCCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp GAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCGGTCATCATCAGGCTTaGCAGCTGCTGGCTCACGCC +
Preference number: 4 (lower is better)
Translates to: EQLMRAARAKPRLSPRPGGHHQA*QLLAHA
Trigger: GGCGTGAGCCAGCAGCTGTCAAGCCTGATGATGACC...GCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCTTGGCCCCTCACGAATaGTCTGGCCCAGCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSLAPHE*SGPAWQ
Trigger: TTGCCAAGCTGGGCCAGATCATTCGTGAGGGGCCAA...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp TTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCCTCGGGCAGGCTGTTaGGGTCGGTGGCCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: FGLFQLSLSQAGPQTLGPPRAGC*GRWPAA
Trigger: CGCTGCTGGCCACCGACCTCAACAGCCTGCCCGAGG...GGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCTCTGGGCCTTTGGCCTaGGGCTCCACAGGGTACAAC +
Preference number: 4 (lower is better)
Translates to: LSAPVTPGTLAEATDPLPSGPLA*GSTGYN
Trigger: GTTGTACCCTGTGGAGCCTCAGGCCAAAGGCCCAGA...GGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp CAAGCCGGCCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCATGCTGTCTTAACCTGTaGTGTGGCCATGATGCTGTC +
Preference number: 4 (lower is better)
Translates to: QAGRAGPEPPQGSRVHAPCCLNL*CGHDAV
Trigger: GACAGCATCATGGCCACATCACAGGTTAAGACAGCA...TGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGGCCGGCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp TTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCGGCTCATCCGCGGCGTaGCGGCAGCTCCTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: FGLFQLSLSQAGPQTLGPGSSAA*RQLLGL
Trigger: GAGACCCAGGAGCTGCCGGCACGCCGCGGATGAGCC...GGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp ACCTTGGTAGATGCTCCCCGTCCCTGCAACCAACAGGTTCAGGAGGTCCCCAGGGGCTCATCCGCGGCGTaGCGGCAGCTCCTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: TLVDAPRPCNQQVQEVPRGSSAA*RQLLGL
Trigger: GAGACCCAGGAGCTGCCGGCACGCCGCGGATGAGCC...CCTGGGGACCTCCTGAACCTGTTGGTTGCAGGGACGGGGAGCATCTACCAAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR GCA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGAGTGTCAGGCTCCACTaGAAAGAAGCGAGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWSVRLH*KEARGL
Trigger: GAGGCCTCTCGCTTCTTTGCAGTGGAGCCTGACACT...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp GAGGGTGGGGAGCTGGAGGTCAGTGCCCTGTCTACAGGGGGCAGCGGCTGCTCAGGCAAAGCCGACCTGTaGCAGCTCAGTGATGGCCAC +
Preference number: 4 (lower is better)
Translates to: EGGELEVSALSTGGSGCSGKADL*QLSDGH
Trigger: GTGGCCATCACTGAGCTGGCACAGGTCGGCTTTGCC...TGAGCAGCCGCTGCCCCCTGTAGACAGGGCACTGACCTCCAGCTCCCCACCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp GACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGGGAGCCCCGCTGCCAAAGGCAGATaGACTGACAATGCTGTAGGT +
Preference number: 4 (lower is better)
Translates to: DPSRRRAHECMPHHPGSPAAKGR*TDNAVG
Trigger: ACCTACAGCATTGTCAGTGCATCTGCCTTTGGCAGC...GGGGCTCCCAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGATGCTGTACTCCACCTaGCCGTTGGGTCCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWMLYST*PLGPES
Trigger: AGACTCAGGACCCAACGGGCAGGTGGAGTACAGCAT...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCGTCAGGGTCCACGGCTaGCACAGCAATGAGTGTGGT +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSVRVHG*HSNECG
Trigger: ACCACACTCATTGCTGTGGCAGCCGTGGACCCTGAC...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTGTCAGGGTCCACGGCTaGCACAGCAATGAGTGTGGT +
Preference number: 4 (lower is better)
Translates to: WTGVGCPASRGCPRWASLVRVHG*HSNECG
Trigger: ACCACACTCATTGCTGTGGCAGCCGTGGACCCTGAC...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp TTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGGGAGGGCAATGACCTTCCCTaGCGAGGAGTCCTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: LRLLSRRGWCLRGGAGREGNDLP*RGVLQL
Trigger: CAGCTGGAGGACTCCTCGGCAGGGAAGGTCATTGCC...CTCCCTCCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp GGTCCAGGTCCCGCAGCACCAGCAGACACCCATCGGGCTGCAGATGGAAGTTCTGACAGGGATCTCAGCTaGCCGGGGCGGGGACCCGTT +
Preference number: 4 (lower is better)
Translates to: GPGPAAPADTHRAADGSSDRDLS*PGRGPV
Trigger: AACGGGTCCCCGCCCCGGGCAGCTGAGATCCCTGTC...AGAACTTCCATCTGCAGCCCGATGGGTGTCTGCTGGTGCTGCGGGACCTGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTCCGGCCAGCAGGCTGTACACCGCCTaGGACTCGCGGTCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: GMWRKCSETWTGVGCPASRLYTA*DSRSRR
Trigger: GCGCCTGGACCGCGAGTCGCAGGCGGTGTACAGCCT...GCTGGCCGGACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp TTGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCGCGCACACGGTCGGGGATCAGGCTGTACACCGCCTaGGACTCGCGGTCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: LESRWMNSSSKPRTRSGIRLYTA*DSRSRR
Trigger: GCGCCTGGACCGCGAGTCGCAGGCGGTGTACAGCCT...GATCCCCGACCGTGTGCGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GGATCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCGTTGCCCACGAGGGTaGCGCGTGGTGAGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: GSEQLMRAARAKPRLSPRRCPRG*RVVSAQ
Trigger: CTGAGCACTCACCACGCGGCACCCTCGTGGGCAACG...CCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp CCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGCTCATCTGCATCCACTaGGCCTGTCACGTTGCCCAC +
Preference number: 4 (lower is better)
Translates to: PPLRLLSRRGWCLRGGAGLICIH*ACHVAH
Trigger: GTGGGCAACGTGACAGGCGCAGTGGATGCAGATGAG...CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTTGGGGCCCTCATCTaGATCCACTGCGCCTGTCAC +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRVGALI*IHCACH
Trigger: GTGACAGGCGCAGTGGATGCAGATGAGGGCCCCAAC...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCGTTGGGGCCCTCATCTaGATCCACTGCGCCTGTCAC +
Preference number: 4 (lower is better)
Translates to: EQLMRAARAKPRLSPRPGVGALI*IHCACH
Trigger: GTGACAGGCGCAGTGGATGCAGATGAGGGCCCCAAC...GCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp TTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGGGAGGTCGGTGGCCACCCCTaGAGTGTACTCAGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: LRLLSRRGWCLRGGAGREVGGHP*SVLSLG
Trigger: ACCAAGGCTGAGTACACTGCAGGGGTGGCCACCGAC...CTCCCTCCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACCGAAGGTGCGCAGAATaGCGTCCATGCTCCCCATGG +
Preference number: 4 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHRRCAE*RPCSPW
Trigger: CCATGGGGAGCATGGACGGCATTCTGCGCACCTTCG...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGTGCCCGTGCTGCCGTaGACCACATGGATCCCATCG +
Preference number: 4 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLVPVLP*TTWIPS
Trigger: CGATGGGATCCATGTGGTGCACGGCAGCACGGGCAC...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp TGCAGTGTGAGGTCAGCAACCAGGTCGAGGGTTGGGGAGGGTCCACGGGGAGGTGCAGCGTGCCCGTGCTaGCGTGCACCACATGGATCC +
Preference number: 4 (lower is better)
Translates to: CSVRSATRSRVGEGPRGGAACPC*RAPHGS
Trigger: GGATCCATGTGGTGCACGGCAGCACGGGCACGCTGC...ACCTCCCCGTGGACCCTCCCCAACCCTCGACCTGGTTGCTGACCTCACACTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp TTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCGGTGGCCAGCAGCGTaGCCGTGCTGCCGTGCACCA +
Preference number: 4 (lower is better)
Translates to: FGLFQLSLSQAGPQTLGPRWPAA*PCCRAP
Trigger: TGGTGCACGGCAGCACGGGCACGCTGCTGGCCACCG...GGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACATTCTGTGCGGGCGTTaGGCTCGAAGGCAGTGGCCT +
Preference number: 4 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHILCGR*ARRQWP
Trigger: AGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAAT...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCACGGTGGATGGGTGCTaGTCACACCCACAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSTVDGC*SHPQGF
Trigger: GAAGCCTTGTGGGTGTGAGCAGCACCCATCCACCGT...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTCGGCTGCATTCAGTCTaGAAAGGCTGGGCCACGGCC +
Preference number: 4 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLRLHSV*KGWATA
Trigger: GGCCGTGGCCCAGCCTTTGCAGACTGAATGCAGCCG...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTCGGCTGCATTCAGTCTaGAAAGGCTGGGCCACGGCC +
Preference number: 4 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPRLHSV*KGWATA
Trigger: GGCCGTGGCCCAGCCTTTGCAGACTGAATGCAGCCG...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp CAAGCCGGCCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCAAGTCTTCCTGCAAGATaGTGTGGCCTTCAGGGATGT +
Preference number: 4 (lower is better)
Translates to: QAGRAGPEPPQGSRVHAPSLPAR*CGLQGC
Trigger: ACATCCCTGAAGGCCACAGCATCTTGCAGGAAGACT...TGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGGCCGGCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp CTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCTCCTGGTGGAACAGATaGCTGGGTGCCAGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: LSAPVTPGTLAEATDPLPSWWNR*LGASWE
Trigger: CTCCCAGCTGGCACCCAGGCATCTGTTCCACCAGGA...GGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp GGATCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCACGTGGCAGCTGGTaGCAACATGGCGCCCCATGG +
Preference number: 4 (lower is better)
Translates to: GSEQLMRAARAKPRLSPRPRGSW*QHGAPW
Trigger: CCATGGGGCGCCATGTTGCCACCAGCTGCCACGTGG...CCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACGCTGGTAGGCCTGTGTaGTCTCGTAGTCCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHAGRPV*SRSPAP
Trigger: GGGAGCTGGACTACGAGACCACACAGGCCTACCAGC...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTATGTCCGCCTTCCCCTaGACGGAGGTCGGGGAGATG +
Preference number: 4 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLMSAFP*TEVGEM
Trigger: CATCTCCCCGACCTCCGTCCAGGGGAAGGCGGACAT...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp CGATGCAGGGAGGGGAGCATTGCCAGCCTCCCACGCTTCTGTCCCTCCCAAGCCATGTCCGCCTTCCCCTaGACGGAGGTCGGGGAGATG +
Preference number: 4 (lower is better)
Translates to: RCREGSIASLPRFCPSQAMSAFP*TEVGEM
Trigger: CATCTCCCCGACCTCCGTCCAGGGGAAGGCGGACAT...GGCTTGGGAGGGACAGAAGCGTGGGAGGCTGGCAATGCTCCCCTCCCTGCATCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp GGATCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGATCAGCTCGGCCTCATaGGGGTCGGGGTTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: GSEQLMRAARAKPRLSPRISSAS*GSGFSR
Trigger: CCGGGAGAACCCCGACCCCCATGAGGCCGAGCTGAT...CCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GGCCACATTCCTCCAAGTCACTGCTCTGTCACCCAGACTTGGGGCGGGGAGTGGGCCACCACCCGCAGCTaGTACTCCGCGATGCGCTCG +
Preference number: 4 (lower is better)
Translates to: GHIPPSHCSVTQTWGGEWATTRS*YSAMRS
Trigger: CGAGCGCATCGCGGAGTACCAGCTGCGGGTGGTGGC...CCACTCCCCGCCCCAAGTCTGGGTGACAGAGCAGTGACTTGGAGGAATGTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGCGGCCGGGAAGAAGGTaGGCGTCTCGTCGTTCACAT +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRRPGRR*ASRRSH
Trigger: ATGTGAACGACGAGACGCCCACCTTCTTCCCGGCCG...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GGGCACAGGGTGGAACAGGAAGAGGGCCTGAGCTTGGGCCCAGCTCCATCACTGGCATGTAGGCGGCTGTaGTCTCCCGGTCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: GHRVEQEEGLSLGPAPSLACRRL*SPGPGP
Trigger: TGGGCCTGGACCGGGAGACCACAGCCGCCTACATGC...CAGTGATGGAGCTGGGCCCAAGCTCAGGCCCTCTTCCTGTTCCACCCTGTGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp TTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGGGAGGGTGTTGAGCGTGTCTaGGCCCTCATCCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: LRLLSRRGWCLRGGAGREGVERV*ALIQQH
Trigger: GTGCTGCTGGATGAGGGCCCAGACACGCTCAACACC...CTCCCTCCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCTCCAGGTCCAGTGCCTaGATGGTGATGAGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSSRSSA*MVMRLV
Trigger: CACCAGCCTCATCACCATCCAGGCACTGGACCTGGA...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCGTAGAGGTGAGGCGGTaGGATAAGATGGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPVEVRR*DKMGHW
Trigger: CCAGTGCCCCATCTTATCCCACCGCCTCACCTCTAC...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTCAGCTGGACATACCCTaGGGGCACCAGGTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPQLDIP*GHQVQQ
Trigger: CTGCTGGACCTGGTGCCCCCAGGGTATGTCCAGCTG...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGAGTCCATGTCCACATaGAAGGCCTCCACGCCAGGG +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRESMST*KASTPG
Trigger: CCCTGGCGTGGAGGCCTTCCATGTGGACATGGACTC...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTCTCGTAGGACTGCAGTaGCCGCTGTGTGGTCACCAA +
Preference number: 4 (lower is better)
Translates to: WTGVGCPASRGCPRWASLLVGLQ*PLCGHQ
Trigger: TTGGTGACCACACAGCGGCCACTGCAGTCCTACGAG...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp CGTTGTGGCCTGCCAGGTCTCGGGCCACAATGTCCACCACGAAGTAGCCGGGGCGGTGGTGCCCCAGAGTaGGGGCTCTCCACCATCTGT +
Preference number: 4 (lower is better)
Translates to: RCGLPGLGPQCPPRSSRGGGAPE*GLSTIC
Trigger: ACAGATGGTGGAGAGCCCCCACTCTGGGGCACCACC...GCCCCGGCTACTTCGTGGTGGACATTGTGGCCCGAGACCTGGCAGGCCACAACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTAGACCTCGTACACGTTaGAGCGCAGCGGGATCTCCT +
Preference number: 4 (lower is better)
Translates to: WTGVGCPASRGCPRWASLRPRTR*SAAGSP
Trigger: AGGAGATCCCGCTGCGCTCCAACGTGTACGAGGTCT...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp CTGGGCCACGGCCTTGGCCCAGGCCCCACAGGACAGGAAGGGTGGTGGGGGTGTCCTCATCCTTGTCCGTaGCGTAGACCTCGTACACGT +
Preference number: 4 (lower is better)
Translates to: LGHGLGPGPTGQEGWWGCPHPCP*RRPRTR
Trigger: ACGTGTACGAGGTCTACGCCACGGACAAGGATGAGG...ACACCCCCACCACCCTTCCTGTCCTGTGGGGCCTGGGCCAAGGCCGTGGCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGTGCTCAGGCACTGTCAGCAGCAGTCTCGTATGGCACTaGCTGGCCCAGGTCGCTGGC +
Preference number: 4 (lower is better)
Translates to: VTLPTRVPRGECSGTVSSSLVWH*LAQVAG
Trigger: GCCAGCGACCTGGGCCAGCCAGTGCCATACGAGACT...GCTGCTGACAGTGCCTGAGCACTCACCACGCGGCACCCTCGTGGGCAACGTGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGAGTACACGATCGCGTTaGGGCCCTCATCTGCATCCA +
Preference number: 4 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWSTRSR*GPHLHP
Trigger: TGGATGCAGATGAGGGCCCCAACGCGATCGTGTACT...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp GTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGTGCTCAGGCACTGTCAGCAGCCCACCTTGGCGTCGGTaGCCACCCCTGCAGTGTACT +
Preference number: 4 (lower is better)
Translates to: VTLPTRVPRGECSGTVSSPPWRR*PPLQCT
Trigger: AGTACACTGCAGGGGTGGCCACCGACGCCAAGGTGG...GCTGCTGACAGTGCCTGAGCACTCACCACGCGGCACCCTCGTGGGCAACGTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGGGAGTCCAGGGCCAGCACCTaGATCAACTCTGAGCCCACC +
Preference number: 4 (lower is better)
Translates to: LRLLSRRGWCLRGGAGRESRAST*INSEPT
Trigger: GGTGGGCTCAGAGTTGATCCAGGTGCTGGCCCTGGA...CTCCCTCCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGATGGCCGTGTCGTTGTaGCCTGCCAGGTCTCGGGCC +
Preference number: 4 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQMAVSL*PARSRA
Trigger: GGCCCGAGACCTGGCAGGCCACAACGACACGGCCAT...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTATGGCCGTGTCGTTGTaGCCTGCCAGGTCTCGGGCC +
Preference number: 4 (lower is better)
Translates to: SEQLMRAARAKPRLSPRPMAVSL*PARSRA
Trigger: GGCCCGAGACCTGGCAGGCCACAACGACACGGCCAT...AGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTCGTCCAGGATGCGGTTaGTATCGCGGTTCACCACGT +
Preference number: 4 (lower is better)
Translates to: WTGVGCPASRGCPRWASLRPGCG*YRGSPR
Trigger: ACGTGGTGAACCGCGATACCAACCGCATCCTGGACG...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp CGTTGGGGCCCTCATCTGCATCCACTGCGCCTGTCACGTTGCCCACGAGGGTGCGCAGCCGGACAGAGATaGCAGGCTGCACGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: RWGPHLHPLRLSRCPRGCAAGQR*QAARPG
Trigger: TCCTGGACGTGCAGCCTGCCATCTCTGTCCGGCTGC...GCACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCAGATGAGGGCCCCAACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGGGAGCGCCCAAAAGTTCCATaGGTGCGCGTGGGGCTGTTC +
Preference number: 4 (lower is better)
Translates to: LRLLSRRGWCLRGGAGRERPKVP*VRVGLF
Trigger: GAACAGCCCCACGCGCACCCATGGAACTTTTGGGCG...CTCCCTCCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp CTGGGCCACGGCCTTGGCCCAGGCCCCACAGGACAGGAAGGGTGGTGGGGGTGTAGGCTTGACAGCTGCTaGCTCACGCCCAAAAGTTCC +
Preference number: 4 (lower is better)
Translates to: LGHGLGPGPTGQEGWWGCRLDSC*LTPKSS
Trigger: GGAACTTTTGGGCGTGAGCCAGCAGCTGTCAAGCCT...ACACCCCCACCACCCTTCCTGTCCTGTGGGGCCTGGGCCAAGGCCGTGGCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGCAGCGAGCCCTTGATTaGCCCCTCACGAATGATCTG +
Preference number: 4 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWQRALD*PLTNDL
Trigger: CAGATCATTCGTGAGGGGCCAATCAAGGGCTCGCTG...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000224721.12
ENST00000398788.4
CDS-3UTR CCA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTTCCACTGGTGGCTTGTaGCGGAAGCGCAGGCTACCC +
Preference number: 4 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLSTGGL*RKRRLP
Trigger: GGGTAGCCTGCGCTTCCGCCACAAGCCACCAGTGGA...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGGGAGCTTGAGCTCCACTGGTaGCTTGTGGCGGAAGCGCAG +
Preference number: 4 (lower is better)
Translates to: LRLLSRRGWCLRGGAGRELELHW*LVAEAQ
Trigger: CTGCGCTTCCGCCACAAGCCACCAGTGGAGCTCAAG...CTCCCTCCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTCTGCCGTGCACCACATaGATCCCATCGGGCCCCTTG +
Preference number: 4 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLLPCTT*IPSGPL
Trigger: CAAGGGGCCCGATGGGATCCATGTGGTGCACGGCAG...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CCGCAGGTAATCCTCCAGGACCACCTTCAGCAGCGAGCCCTTGATTGGCCCCTCCGGCCCAGGCCCTTCTaGTCTTCCTCGGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PQVILQDHLQQRALDWPLRPRPF*SSSGRL
Trigger: CAGCCTGCCCGAGGAAGACCAGAAGGGCCTGGGCCG...GAGGGGCCAATCAAGGGCTCGCTGCTGAAGGTGGTCCTGGAGGATTACCTGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642965.1
CDS-3UTR CCA 90 bp CCTGGATCAACTCTGAGCCCACCTTGGCGTCGGTGGCCACCCCTGCAGTGTACTCGGCCCAGGCCCTTCTaGTCTTCCTCGGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PGSTLSPPWRRWPPLQCTRPRPF*SSSGRL
Trigger: CAGCCTGCCCGAGGAAGACCAGAAGGGCCTGGGCCG...AGTACACTGCAGGGGTGGCCACCGACGCCAAGGTGGGCTCAGAGTTGATCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCGCAGGGGTGTGGATTTaGCGGATTCTGTGCGGGCGT +
Preference number: 4 (lower is better)
Translates to: EQLMRAARAKPRLSPRPGAGVWI*RILCGR
Trigger: ACGCCCGCACAGAATCCGCCAAATCCACACCCCTGC...GCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGCAGGGGTGTGGATTTaGCGGATTCTGTGCGGGCGT +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRAGVWI*RILCGR
Trigger: ACGCCCGCACAGAATCCGCCAAATCCACACCCCTGC...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TGCAGTGTGAGGTCAGCAACCAGGTCGAGGGTTGGGGAGGGTCCACGGGGAGGTCCTGGGAGGGGACGGTaGATGGGTGCTGCTCACACC +
Preference number: 4 (lower is better)
Translates to: CSVRSATRSRVGEGPRGGPGRGR*MGAAHT
Trigger: GGTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGG...ACCTCCCCGTGGACCCTCCCCAACCCTCGACCTGGTTGCTGACCTCACACTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GTTGGCAATGACCTTCCCTGCCGAGGAGTCCTCCAGCTGGACATACCCTGGGGGCCTGCCCTTGCTCCCTaGGAGGGGACGGTGGATGGG +
Preference number: 4 (lower is better)
Translates to: VGNDLPCRGVLQLDIPWGPALAP*EGTVDG
Trigger: CCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGG...CCCCCAGGGTATGTCCAGCTGGAGGACTCCTCGGCAGGGAAGGTCATTGCCAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCGGAGGTGATGCCACCTaGACTCGGAGGAGGACAGCT +
Preference number: 4 (lower is better)
Translates to: LSAPVTPGTLAEATDPLPGGDAT*TRRRTA
Trigger: AGCTGTCCTCCTCCGAGTCCAGGTGGCATCACCTCC...GGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp GAGGGTGGGGAGCTGGAGGTCAGTGCCCTGTCTACAGGGGGCAGCGGCTGCTCACTCCAAGCATGGTCTTaGCAGCCGTCTTGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: EGGELEVSALSTGGSGCSLQAWS*QPSWWP
Trigger: GGGCCACCAAGACGGCTGCCAAGACCATGCTTGGAG...TGAGCAGCCGCTGCCCCCTGTAGACAGGGCACTGACCTCCAGCTCCCCACCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR TCA 90 bp CCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGCTCCACGGTGAACTCTaGCTTGGTCTCTCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: PPLRLLSRRGWCLRGGAGLHGEL*LGLSVQ
Trigger: CTGGACAGAGAGACCAAGTCAGAGTTCACCGTGGAG...CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp CCCTCGCCTTTCTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGCCTGTGCCAGCTCAGTaGTGGCCACGCTGTACTCGG +
Preference number: 4 (lower is better)
Translates to: PSPFSQLPSLPGPLQRQLPVPAQ*WPRCTR
Trigger: CCGAGTACAGCGTGGCCATCACTGAGCTGGCACAGG...CAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAGAAAGGCGAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCTGTCCACCACCTGGATaGAGAGTGGAAGGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSCPPPG*RVEGQS
Trigger: GCTTTGCCCTTCCACTCTTCATCCAGGTGGTGGACA...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp GAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCTCACATCCAGGACAGTaGCGAACACGGTGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: EQLMRAARAKPRLSPRPGSHPGQ*RTRWLC
Trigger: GCACAGCCACCGTGTTCGTCACTGTCCTGGATGTGA...GCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp TTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGGGAGCGGGGGCCTCATCGTTaGTGTCCTCCACGTACACAA +
Preference number: 4 (lower is better)
Translates to: LRLLSRRGWCLRGGAGRERGPHR*CPPRTQ
Trigger: TTGTGTACGTGGAGGACATCAACGATGAGGCCCCCG...CTCCCTCCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGTGTAGCGGCCGTGGCTaGTCTCGTAGTCCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRCSGRG*SRSPAL
Trigger: AAGAGCTGGACTACGAGATCAGCCACGGCCGCTACA...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGGGGGCCGGTTCACAGTaGCGATCCCTGTCGTGGCAT +
Preference number: 4 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQGAGSQ*RSLSWH
Trigger: ATGCCACGACAGGGATCGTCACTGTGAACCGGCCCC...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCTGGCATTTGGCACACTaGCAGAGCGCTCTGGTAGGT +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSWHLAH*QSALVG
Trigger: ACCTACCAGAGCGCTCTGTCAGTGTGCCAAATGCCA...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp GGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTCCGGCCAGCCGGCTGCCACAGCAATaGGTGTGGTCCCAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: GMWRKCSETWTGVGCPASRLPQQ*VWSQGW
Trigger: CCACCCCTGGGACCACACTCATTGCTGTGGCAGCCG...GCTGGCCGGACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGGAGTGCAAAGTTGCCTaGGTCAGCATCAGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWECKVA*VSISGS
Trigger: ACTGCCACTGATGCTGACTCAGGCAACTTTGCACTC...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp CTGGGCCACGGCCTTGGCCCAGGCCCCACAGGACAGGAAGGGTGGTGGGGGTGTGATCACCACCTGCACTaGATTTTCGCGACGGTTGCT +
Preference number: 4 (lower is better)
Translates to: LGHGLGPGPTGQEGWWGCDHHLH*IFATVA
Trigger: AGCAACCGTCGCGAAAATTCAGTGCAGGTGGTGATC...ACACCCCCACCACCCTTCCTGTCCTGTGGGGCCTGGGCCAAGGCCGTGGCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTGTGGCCGGCAGTCATTaGCATCCAGCACTTGGATCA +
Preference number: 4 (lower is better)
Translates to: WTGVGCPASRGCPRWASLVAGSH*HPALGS
Trigger: TGATCCAAGTGCTGGATGTCAATGACTGCCGGCCAC...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTGCCAGGGCCCTCAAGTaGGTAGGTCAACTCTCCATT +
Preference number: 4 (lower is better)
Translates to: WTGVGCPASRGCPRWASLARALK*VGQLSI
Trigger: AATGGAGAGTTGACCTACTCACTTGAGGGCCCTGGC...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCGCCAGGGCCCTCAAGTaGGTAGGTCAACTCTCCATT +
Preference number: 4 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPARALK*VGQLSI
Trigger: AATGGAGAGTTGACCTACTCACTTGAGGGCCCTGGC...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCCCACCACGGTCAGACTaGACTTCTCGTAGGACTGCA +
Preference number: 4 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPPPRSD*TSRRTA
Trigger: TGCAGTCCTACGAGAAGTTCAGTCTGACCGTGGTGG...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp TGCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCGCGGGATCTCCTCTCTaGTGTGGAGGATGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: CGVELGGRRACLASFSSAAGSPL*CGGWCR
Trigger: ACGGCACCATCCTCCACATCAGAGAGGAGATCCCGC...GGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGCGGGATCTCCTCTCTaGTGTGGAGGATGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPAGSPL*CGGWCR
Trigger: ACGGCACCATCCTCCACATCAGAGAGGAGATCCCGC...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CTGCAGTGGCCGCTGTGTGGTCACCAAGCCCGAGTCCATGTCCACATGGAAGGCGAGGGTGCCGCGTGGTaGGTGCTCAGGCACTGTCAG +
Preference number: 4 (lower is better)
Translates to: LQWPLCGHQARVHVHMEGEGAAW*VLRHCQ
Trigger: CTGACAGTGCCTGAGCACTCACCACGCGGCACCCTC...GCCTTCCATGTGGACATGGACTCGGGCTTGGTGACCACACAGCGGCCACTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp TTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGGGAGCGTTGCCGGCTGCGATaGAGTAGTACACGATCGCGT +
Preference number: 4 (lower is better)
Translates to: LRLLSRRGWCLRGGAGRERCRLR*SSTRSR
Trigger: ACGCGATCGTGTACTACTTCATCGCAGCCGGCAACG...CTCCCTCCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACGTGGTGGCTGGTCGTTaGTGTCCTCTAGCACAACGC +
Preference number: 4 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHVVAGR*CPLAQR
Trigger: GCGTTGTGCTAGAGGACATCAACGACCAGCCACCAC...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGCGGGGCTGTAGGCCATaGAGAGGTCGAAGGTGCGCA +
Preference number: 4 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQRGCRP*RGRRCA
Trigger: TGCGCACCTTCGACCTCTTCATGGCCTACAGCCCCG...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTTGGAGAGCAGGTGGATaGACTCCTCCTCGAAGCCGC +
Preference number: 4 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPWRAGG*TPPRSR
Trigger: GCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCA...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp TGCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGGAGAGCAGGTGGATaGACTCCTCCTCGAAGCCGC +
Preference number: 4 (lower is better)
Translates to: CGVELGGRRACLASFSSAWRAGG*TPPRSR
Trigger: GCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCA...GGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACTGGGCCTGCCAGCCATaGGGAAGAGAGAAGAGGGTT +
Preference number: 4 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHWACQP*GREKRV
Trigger: AACCCTCTTCTCTCTTCCTCATGGCTGGCAGGCCCA...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp GAGGGTGGGGAGCTGGAGGTCAGTGCCCTGTCTACAGGGGGCAGCGGCTGCTCATGCCCTGGGTCCAGCTaGTCTGCCTTTGAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: EGGELEVSALSTGGSGCSCPGSS*SAFELL
Trigger: CAGAAGCTCAAAGGCAGATCAGCTGGACCCAGGGCA...TGAGCAGCCGCTGCCCCCTGTAGACAGGGCACTGACCTCCAGCTCCCCACCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGAACGTCCAGAGGCTCTaGCACCCCGCGCTCCATGCC +
Preference number: 4 (lower is better)
Translates to: WEGGGPVWPLSAQPEPSWNVQRL*HPALHA
Trigger: GGCATGGAGCGCGGGGTGGCAGAGCCTCTGGACGTT...CCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp TGGACGTCCAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGCTCCGTGTGCGTGTGTaGAGCGGCGCCGCGCCTCGC +
Preference number: 4 (lower is better)
Translates to: WTSSREGCGGNVARLGLELRVRV*SGAAPR
Trigger: GCGAGGCGCGGCGCCGCTGCACACACGCACACGGAG...CTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTGGACGTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp GGCCACATTCCTCCAAGTCACTGCTCTGTCACCCAGACTTGGGGCGGGGAGTGGAGGAGTAGAGGACGCTaGCCCCTGCCCCCAAGTCGG +
Preference number: 4 (lower is better)
Translates to: GHIPPSHCSVTQTWGGEWRSRGR*PLPPSR
Trigger: CCGACTTGGGGGCAGGGGGCAGCGTCCTCTACTCCT...CCACTCCCCGCCCCAAGTCTGGGTGACAGAGCAGTGACTTGGAGGAATGTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR GCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCGATGGTGTAGCCAATaGCCCGGGGACGTCCTTTAT +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSRWCSQ*PGDVLY
Trigger: ATAAAGGACGTCCCCGGGGCATTGGCTACACCATCG...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp CTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCTGCTGTACACCAGGGTaGCATTCTCCCCCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: LSAPVTPGTLAEATDPLPCCTPG*HSPPGL
Trigger: CAGACCTGGGGGAGAATGGCACCCTGGTGTACAGCA...GGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp ATGCGGACAGGCCACCGCCCTCTTGTCTGCATGGCAGATGGGCACAGGGTGGAAAGACCCCCGCCGGGATaGCTTCAAGCACCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: MRTGHRPLVCMADGHRVERPPPG*LQAPRP
Trigger: TGGCCGAGGTGCTTGAAGGCATCCCGGCGGGGGTCT...TTCCACCCTGTGCCCATCTGCCATGCAGACAAGAGGGCGGTGGCCTGTCCGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp GTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAAGACAGTGGCCGCTGGTACTCCGCGATaGGCTCGCGGTCCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: VDPPASETGAAGCRKTVAAGTPR*ARGPAR
Trigger: CCGAGCTGGACCGCGAGCGCATCGCGGAGTACCAGC...GGCCACTGTCTTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTAC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTCGAACACGGTGGCTGTaGCCGTGTGTCGCTTCCCTA +
Preference number: 4 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLRTRWL*PCVASL
Trigger: TAGGGAAGCGACACACGGGCACAGCCACCGTGTTCG...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp GAGGGTGGGGAGCTGGAGGTCAGTGCCCTGTCTACAGGGGGCAGCGGCTGCTCACGCTGGCCTCATAGCTaGTCTGCAGAAAGATGGGCC +
Preference number: 4 (lower is better)
Translates to: EGGELEVSALSTGGSGCSRWPHS*SAERWA
Trigger: GGCCCATCTTTCTGCAGAGCAGCTATGAGGCCAGCG...TGAGCAGCCGCTGCCCCCTGTAGACAGGGCACTGACCTCCAGCTCCCCACCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp TGCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCAGACGGCTGTACTGCTaGTGTGTGAACACGGGGGCC +
Preference number: 4 (lower is better)
Translates to: CGVELGGRRACLASFSSARRLYC*CVNTGA
Trigger: GGCCCCCGTGTTCACACAGCAGCAGTACAGCCGTCT...GGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGCTCAAACTTCCCCTCTaGGCCCGACAGGATGCGGTA +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRLKLPL*ARQDAV
Trigger: TACCGCATCCTGTCGGGCGCAGAGGGGAAGTTTGAG...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGAGGCATTGGAGAACTaGACGGCCTCGTCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLEALEN*TASSSS
Trigger: CGAGCTGGACGAGGCCGTGCAGTTCTCCAATGCCTC...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp GGATCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGAGGCCCCCGCGATGTTaGCAGAGGCCAGGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: GSEQLMRAARAKPRLSPRRPPRC*QRPGRR
Trigger: TCTTCTCCCTGGCCTCTGGCAACATCGCGGGGGCCT...CCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTCCAGGATGGTCACCTaGAGGATGTGGTCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWSRMVT*RMWSFF
Trigger: GAAGAAGGACCACATCCTGCAGGTGACCATCCTGGA...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCAGGGTCCACGGCTaGCACAGCAATGAGTGTGGT +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRVRVHG*HSNECG
Trigger: ACCACACTCATTGCTGTGGCAGCCGTGGACCCTGAC...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp CTGATGTGGAGGATGGTGCCGTTGGGTGGGCGCACAAAGACAGGGCGGTTGTCAAGGCTGTACACCGCCTaGGACTCGCGGTCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: LMWRMVPLGGRTKTGRLSRLYTA*DSRSRR
Trigger: GCGCCTGGACCGCGAGTCGCAGGCGGTGTACAGCCT...TGACAACCGCCCTGTCTTTGTGCGCCCACCCAACGGCACCATCCTCCACATCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GGATCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGTCCTCCAGGGCCACCTaGAGCGGCTGCATAGTCTCG +
Preference number: 4 (lower is better)
Translates to: GSEQLMRAARAKPRLSPRSSRAT*SGCIVS
Trigger: CGAGACTATGCAGCCGCTGCAGGTGGCCCTGGAGGA...CCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp ACAGATCCCTGGGCCGCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTACTCTCGCTCCTCCAGGGCCACCTaGAGCGGCTGCATAGTCTCG +
Preference number: 4 (lower is better)
Translates to: TDPWAASSSSSSSSSYSRSSRAT*SGCIVS
Trigger: CGAGACTATGCAGCCGCTGCAGGTGGCCCTGGAGGA...GCGAGAGTAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGCGGCCCAGGGATCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp TCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGTGCCGCGTGGTGAGTaGTCAGGCACTGTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SEQLMRAARAKPRLSPRPVPRGE*SGTVSS
Trigger: GCTGCTGACAGTGCCTGAGCACTCACCACGCGGCAC...AGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCGTTGTTGCCAATGTCTaGATCCAGGGCCAGCACCTG +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSVVANV*IQGQHL
Trigger: CAGGTGCTGGCCCTGGATGCAGACATTGGCAACAAC...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTCGTGTCGTTGTGGCCTaGCAGGTCTCGGGCCACAAT +
Preference number: 4 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPRVVVA*QVSGHN
Trigger: ATTGTGGCCCGAGACCTGGCAGGCCACAACGACACG...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGATAAGCAGTTCTGTCTaGGCAAAGTTCACCCGGCCC +
Preference number: 4 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWISSSV*AKFTRP
Trigger: GGGCCGGGTGAACTTTGCGCAGACAGAACTGCTTAT...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp GAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCGGTCCACGTCCAGGATaGGGTTGGTATCGCGGTTCA +
Preference number: 4 (lower is better)
Translates to: EQLMRAARAKPRLSPRPGGPRPG*GWYRGS
Trigger: TGAACCGCGATACCAACCGCATCCTGGACGTGGACC...GCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTCAAAAGTTCCATGGGTaGGCGTGGGGCTGTTCCACA +
Preference number: 4 (lower is better)
Translates to: WTGVGCPASRGCPRWASLQKFHG*AWGCST
Trigger: TGTGGAACAGCCCCACGCGCACCCATGGAACTTTTG...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCAAAAGTTCCATGGGTaGGCGTGGGGCTGTTCCACA +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSQKFHG*AWGCST
Trigger: TGTGGAACAGCCCCACGCGCACCCATGGAACTTTTG...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCCAAAAGTTCCATGGGTaGGCGTGGGGCTGTTCCACA +
Preference number: 4 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPQKFHG*AWGCST
Trigger: TGTGGAACAGCCCCACGCGCACCCATGGAACTTTTG...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTCCGGCCAGCCCAGCAGCGTGCCCGTaGTGCCGTGCACCACATGGA +
Preference number: 4 (lower is better)
Translates to: GMWRKCSETWTGVGCPASPAACP*CRAPHG
Trigger: TCCATGTGGTGCACGGCAGCACGGGCACGCTGCTGG...GCTGGCCGGACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGCCAGCAGCGTGCCCGTaGTGCCGTGCACCACATGGA +
Preference number: 4 (lower is better)
Translates to: WEGGGPVWPLSAQPEPSWPAACP*CRAPHG
Trigger: TCCATGTGGTGCACGGCAGCACGGGCACGCTGCTGG...CCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGATTTGGCGGATTCTGTaGGGGCGTTGCGCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRIWRIL*GRCARR
Trigger: CCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAAT...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCACGGTGGATGGGTGCTaGTCACACCCACAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: EQLMRAARAKPRLSPRPGTVDGC*SHPQGF
Trigger: GAAGCCTTGTGGGTGTGAGCAGCACCCATCCACCGT...GCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp CCCTCGCCTTTCTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGCCGAAGCTCCTTGCATaGCCAGGCCAGCGCCCTTTC +
Preference number: 4 (lower is better)
Translates to: PSPFSQLPSLPGPLQRQLPKLLA*PGQRPF
Trigger: GAAAGGGCGCTGGCCTGGGCATGCAAGGAGCTTCGG...CAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAGAAAGGCGAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp GTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAAGACAGTGGCCGGGCTCACGAGTGCATaGCCCACCACCCTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: VDPPASETGAAGCRKTVAGLTSA*PTTLGA
Trigger: GGCTCCCAGGGTGGTGGGGCATGCACTCGTGAGCCC...GGCCACTGTCTTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp CAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCATGCAGGGACCCTGGCAGCTaGGGCCTCTTACCATCCATA +
Preference number: 4 (lower is better)
Translates to: QLPSLPGPLQRQLTPSPCRDPGS*GLLPSI
Trigger: TATGGATGGTAAGAGGCCGCAGCTGCCAGGGTCCCT...GCATGGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp CTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCGCGGGTGCTGCAAGATaGTGTGGCCTTCAGGGATGT +
Preference number: 4 (lower is better)
Translates to: LSAPVTPGTLAEATDPLPAGAAR*CGLQGC
Trigger: ACATCCCTGAAGGCCACAGCATCTTGCAGCACCCGC...GGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466757.8
CDS-3UTR CCA 90 bp GCCACATTCCTCCAAGTCACTGCTCTGTCACCCAGACTTGGGGCGGGGAGTGGGCCACGTGGCAGCTGGTaGCAACATGGCGCCCCATGG +
Preference number: 4 (lower is better)
Translates to: ATFLQVTALSPRLGAGSGPRGSW*QHGAPW
Trigger: CCATGGGGCGCCATGTTGCCACCAGCTGCCACGTGG...CCCACTCCCCGCCCCAAGTCTGGGTGACAGAGCAGTGACTTGGAGGAATGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp GAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCAAAAGCCAGGCCACGTaGCAGCTGGTGGCAACATGG +
Preference number: 4 (lower is better)
Translates to: EQLMRAARAKPRLSPRPGKSQAT*QLVATW
Trigger: CCATGTTGCCACCAGCTGCCACGTGGCCTGGCTTTT...GCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp CCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGGTCAGGATGAAGCCATaGCTGTACAGGGGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: PPLRLLSRRGWCLRGGAGVRMKP*LYRGFS
Trigger: GGAGAACCCCCTGTACAGCCATGGCTTCATCCTGAC...CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp CAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCATGCCCAGTTTTCTGGTTGTaGCCCACACCCCCGTCCACT +
Preference number: 4 (lower is better)
Translates to: QLPSLPGPLQRQLTPSPCPVFWL*PTPPST
Trigger: AGTGGACGGGGGTGTGGGCCACAACCAGAAAACTGG...GCATGGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGCGATGCCAGTTTTCTaGTTGTGGCCCACACCCCCG +
Preference number: 4 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPAMPVF*LWPTPP
Trigger: CGGGGGTGTGGGCCACAACCAGAAAACTGGCATCGC...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp CCCTCGCCTTTCTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGCTGTGGCACTGCTGGTaGCTTTCAGAGGGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: PSPFSQLPSLPGPLQRQLLWHCW*LSEGAC
Trigger: GCAGGCCCCCTCTGAAAGCCACCAGCAGTGCCACAG...CAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAGAAAGGCGAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp GTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAAGACAGTGGCCGCCACCACCCGCAGCTaGTACTCCGCGATGCGCTCG +
Preference number: 4 (lower is better)
Translates to: VDPPASETGAAGCRKTVAATTRS*YSAMRS
Trigger: CGAGCGCATCGCGGAGTACCAGCTGCGGGTGGTGGC...GGCCACTGTCTTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp TGCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGGTGGAGCTCTTGGTaGGCGTGCCTGCATCACTGG +
Preference number: 4 (lower is better)
Translates to: CGVELGGRRACLASFSSAWWSSW*ACLHHW
Trigger: CCAGTGATGCAGGCACGCCCACCAAGAGCTCCACCA...GGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp CCCTCGCCTTTCTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGCACCCGGAACTCGCGTaGCACGTCCTCGGACACAGA +
Preference number: 4 (lower is better)
Translates to: PSPFSQLPSLPGPLQRQLHPELA*HVLGHR
Trigger: TCTGTGTCCGAGGACGTGCCACGCGAGTTCCGGGTG...CAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAGAAAGGCGAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCTCATCTGCGTCCGTaGCTTTCAGCTGCAAGATGC +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSPHLRP*LSAARC
Trigger: GCATCTTGCAGCTGAAAGCCACGGACGCAGATGAGG...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACCTCTGTCCAGGGGCCTaGCCACAAACACTTCGCCAA +
Preference number: 4 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHLCPGA*PQTLRQ
Trigger: TTGGCGAAGTGTTTGTGGCCAGGCCCCTGGACAGAG...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGCGATGTCACGGTCAGTaGCTCTCACCTGGACCACAG +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRRCHGQ*LSPGPQ
Trigger: CTGTGGTCCAGGTGAGAGCCACTGACCGTGACATCG...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTGGTCACGGGCACAGATaGTCAGGTTGTAGAAGGCGA +
Preference number: 4 (lower is better)
Translates to: WTGVGCPASRGCPRWASLGHGHR*SGCRRR
Trigger: TCGCCTTCTACAACCTGACCATCTGTGCCCGTGACC...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCTCACTGGCCAGGACATaGGCGACAAAGCTGGAGACA +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSSLART*ATKLET
Trigger: TGTCTCCAGCTTTGTCGCCCATGTCCTGGCCAGTGA...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACCACTGTCAGCGTCACTaGCCAGGACATGGGCGACAA +
Preference number: 4 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHHCQRH*PGHGRQ
Trigger: TTGTCGCCCATGTCCTGGCCAGTGACGCTGACAGTG...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTCCTCCTGGCTATGCGTaGATTCTCCGGGTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: WTGVGCPASRGCPRWASLPPGYA*ILRVVL
Trigger: AAGGACAACCCGGAGAATCCACGCATAGCCAGGAGG...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GGATCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGGAGGAGTCCTCCAGCTaGACATACCCTGGGGGCACC +
Preference number: 4 (lower is better)
Translates to: GSEQLMRAARAKPRLSPREESSS*TYPGGT
Trigger: GGTGCCCCCAGGGTATGTCCAGCTGGAGGACTCCTC...CCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GTTGTGGCCTGCCAGGTCTCGGGCCACAATGTCCACCACGAAGTAGCCGGGGCTGAGGAGTCCTCCAGCTaGACATACCCTGGGGGCACC +
Preference number: 4 (lower is better)
Translates to: VVACQVSGHNVHHEVAGAEESSS*TYPGGT
Trigger: GGTGCCCCCAGGGTATGTCCAGCTGGAGGACTCCTC...AGCCCCGGCTACTTCGTGGTGGACATTGTGGCCCGAGACCTGGCAGGCCACAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TCATCTGCATCCACTGCGCCTGTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGGAGGAGTCCTCCAGCTaGACATACCCTGGGGGCACC +
Preference number: 4 (lower is better)
Translates to: SSASTAPVTLPTRVPRGEEESSS*TYPGGT
Trigger: GGTGCCCCCAGGGTATGTCCAGCTGGAGGACTCCTC...CTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCAGATGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGGGGCTTGGAGAACTGTaGCCGGCAGTCATTGACATC +
Preference number: 4 (lower is better)
Translates to: PPLRLLSRRGWCLRGGAGGLGEL*PAVIDI
Trigger: GATGTCAATGACTGCCGGCCACAGTTCTCCAAGCCC...CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGTCCATGTCCACATaGAAGGCCTCCACGCCAGGG +
Preference number: 4 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPESMST*KASTPG
Trigger: CCCTGGCGTGGAGGCCTTCCATGTGGACATGGACTC...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CGTTGTGGCCTGCCAGGTCTCGGGCCACAATGTCCACCACGAAGTAGCCGGGGCGAGTCCATGTCCACATaGAAGGCCTCCACGCCAGGG +
Preference number: 4 (lower is better)
Translates to: RCGLPGLGPQCPPRSSRGESMST*KASTPG
Trigger: CCCTGGCGTGGAGGCCTTCCATGTGGACATGGACTC...GCCCCGGCTACTTCGTGGTGGACATTGTGGCCCGAGACCTGGCAGGCCACAACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp AAGGCAGTGGCCTCGGCAGCGGTCAGCGTCTCCAGCGAGCGGCCCAGGCCCTTCATCTCCTCTCTGATGTaGAGGATGGTGCCGTTGGGT +
Preference number: 4 (lower is better)
Translates to: KAVASAAVSVSSERPRPFISSLM*RMVPLG
Trigger: ACCCAACGGCACCATCCTCCACATCAGAGAGGAGAT...GAAGGGCCTGGGCCGCTCGCTGGAGACGCTGACCGCTGCCGAGGCCACTGCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCCCTCATCCTTGTCCGTaGCGTAGACCTCGTACACGT +
Preference number: 4 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPPHPCP*RRPRTR
Trigger: ACGTGTACGAGGTCTACGCCACGGACAAGGATGAGG...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CGGCGATCTCACTCAGGTTCTCCGGTAGGTCATCCTCATGCTCCGCCTGGGCGGCCACCTTGGCGTCGGTaGCCACCCCTGCAGTGTACT +
Preference number: 4 (lower is better)
Translates to: RRSHSGSPVGHPHAPPGRPPWRR*PPLQCT
Trigger: AGTACACTGCAGGGGTGGCCACCGACGCCAAGGTGG...CCGCCCAGGCGGAGCATGAGGATGACCTACCGGAGAACCTGAGTGAGATCGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTTCCAGGGCCAGCACCTaGATCAACTCTGAGCCCACC +
Preference number: 4 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLSRAST*INSEPT
Trigger: GGTGGGCTCAGAGTTGATCCAGGTGCTGGCCCTGGA...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCCCCATGGTGAAGACCTaGCCCACATCTTCAGAGTCG +
Preference number: 4 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPPMVKT*PTSSES
Trigger: CGACTCTGAAGATGTGGGCCAGGTCTTCACCATGGG...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
64% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GTTGGCAATGACCTTCCCTGCCGAGGAGTCCTCCAGCTGGACATACCCTGGGGGATGGCCGTGTCGTTGTaGCCTGCCAGGTCTCGGGCC +
Preference number: 4 (lower is better)
Translates to: VGNDLPCRGVLQLDIPWGMAVSL*PARSRA
Trigger: GGCCCGAGACCTGGCAGGCCACAACGACACGGCCAT...CCCCCAGGGTATGTCCAGCTGGAGGACTCCTCGGCAGGGAAGGTCATTGCCAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTCGCCCAAAAGTTCCATaGGTGCGCGTGGGGCTGTTC +
Preference number: 4 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPRPKVP*VRVGLF
Trigger: GAACAGCCCCACGCGCACCCATGGAACTTTTGGGCG...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCCCTGCCCTGGGCTGTaGTCTCCTGGCTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: FGLFQLSLSQAGPQTLGPPCPGL*SPGSSS
Trigger: GGACGAGGAGCCAGGAGACCACAGCCCAGGGCAGGG...GGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GCCGGGGCTGTAGGCCATGAAGAGGTCGAAGGTGCGCAGAATGCCGTCCATGCTCAGGCTACCCTGCCCTaGGCTGTGGTCTCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: AGAVGHEEVEGAQNAVHAQATLP*AVVSWL
Trigger: GAGCCAGGAGACCACAGCCCAGGGCAGGGTAGCCTG...AGCATGGACGGCATTCTGCGCACCTTCGACCTCTTCATGGCCTACAGCCCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TGCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCCTTGAGCTCCACTGGTaGCTTGTGGCGGAAGCGCAG +
Preference number: 4 (lower is better)
Translates to: CGVELGGRRACLASFSSALELHW*LVAEAQ
Trigger: CTGCGCTTCCGCCACAAGCCACCAGTGGAGCTCAAG...GGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGGTTTGTGCAGGGGTGTaGATTTGGCGGATTCTGTGC +
Preference number: 4 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWVCAGV*IWRILC
Trigger: GCACAGAATCCGCCAAATCCACACCCCTGCACAAAC...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGCCTGGGAGGGGACGGTaGATGGGTGCTGCTCACACC +
Preference number: 4 (lower is better)
Translates to: WEGGGPVWPLSAQPEPSWPGRGR*MGAAHT
Trigger: GGTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGG...CCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGCAGCCTGAGCCAAGCTaGTCCCCAGACTCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQQPEPS*SPDSWA
Trigger: GGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTG...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GGATCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCTTAGCCGGAGGGGATaGTGCTTGCGGGGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: GSEQLMRAARAKPRLSPRLSRRG*CLRGGA
Trigger: AGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAG...CCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp AGGTCCCCAGGGAGCCAGTCCAGAGTGATCCAGCTGCAAAGCCCTTGGGAAGAGACTTGGGGCGGGGAGTaGGGCTCAGGGCTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: RSPGSQSRVIQLQSPWEETWGGE*GSGLLP
Trigger: AGGGAGGAGCCCTGAGCCCCACTCCCCGCCCCAAGT...CTCTTCCCAAGGGCTTTGCAGCTGGATCACTCTGGACTGGCTCCCTGGGGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGTCAGTCTGCAAAGGCTaGGCCACGGCCTTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQSVCKG*ATALAQ
Trigger: CTGGGCCAAGGCCGTGGCCCAGCCTTTGCAGACTGA...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
3UTR CAA 72 bp GGGAGGAGGAGCAAACAGGGCTCTCCAAGCATGGTCTaGGCAGCCGTCTTGGTGGCCCCTCTTCAGGGCACC +
Preference number: 4 (lower is better)
Translates to: GRRSKQGSPSMV*AAVLVAPLQGT
Trigger: GGTGCCCTGAAGAGGGGCCACCAAGACGGCTGCCAAGACCATGCTTGGAGAGCCCTGTTTGCTCCTCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR TCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCTGTACTCGGAGCTGTTaGACTCCGGGGCATTGTCAT +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSCTRSC*TPGHCH
Trigger: ATGACAATGCCCCGGAGTTCAACAGCTCCGAGTACA...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp GCCACATTCCTCCAAGTCACTGCTCTGTCACCCAGACTTGGGGCGGGGAGTGGGCCTGTGCCAGCTCAGTaGTGGCCACGCTGTACTCGG +
Preference number: 4 (lower is better)
Translates to: ATFLQVTALSPRLGAGSGPVPAQ*WPRCTR
Trigger: CCGAGTACAGCGTGGCCATCACTGAGCTGGCACAGG...CCCACTCCCCGCCCCAAGTCTGGGTGACAGAGCAGTGACTTGGAGGAATGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR TCA 90 bp CAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCATGCTGTACAGTGGCTGGCTaGAGATGGGCCGGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: QLPSLPGPLQRQLTPSPCCTVAG*RWAGCH
Trigger: ATGACAACCGGCCCATCTTCAGCCAGCCACTGTACA...GCATGGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp CTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCAGCCCTCGTACAGGCTaGTGTCGAAGTAGCTGCCAA +
Preference number: 4 (lower is better)
Translates to: LSAPVTPGTLAEATDPLPSPRTG*CRSSCQ
Trigger: TTGGCAGCTACTTCGACATCAGCCTGTACGAGGGCT...GGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCCAGCATCCATGGCCATaGCCGTCAGATAAATCAGCC +
Preference number: 4 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPQHPWP*PSDKSA
Trigger: GGCTGATTTATCTGACGGTCATGGCCATGGATGCTG...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGCCGTGGCTCCTGCCATaGTGTTCTCCACCACGGAGA +
Preference number: 4 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQPWLLP*CSPPRR
Trigger: TCTCCGTGGTGGAGAACATCATGGCAGGAGCCACGG...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp CCCTCGCCTTTCTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGGCAGAGACGTGGTGGTaGTTTCCCCTGAGCGGGCAT +
Preference number: 4 (lower is better)
Translates to: PSPFSQLPSLPGPLQRQLAETWW*FPLSGH
Trigger: ATGCCCGCTCAGGGGAAATCACCACCACGTCTCTGC...CAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAGAAAGGCGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp GAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCTGCCCGTGGTGCTGTTaGGGCTGTAGAACTTGTTGG +
Preference number: 4 (lower is better)
Translates to: EQLMRAARAKPRLSPRPGCPWCC*GCRTCW
Trigger: CCAACAAGTTCTACAGCCTCAACAGCACCACGGGCA...GCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp CATCCACATTCCCTAGGTAAGTCTTCCCTATACCCGCTGCCCTGGGTCCAGCTGCCAGCTCGGTGGTGGTaGCCACCACGCCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: HPHSLGKSSLYPLPWVQLPARWW*PPRRCC
Trigger: GCAGCAGCGGCGTGGTGGTCACCACCACCGAGCTGG...CAGCTGGACCCAGGGCAGCGGGTATAGGGAAGACTTACCTAGGGAATGTGGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp GGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTCCGGCCAGCCGTACACAATCACCCTaGCGGAGCTCCGCATGGGGC +
Preference number: 4 (lower is better)
Translates to: GMWRKCSETWTGVGCPASRTQSP*RSSAWG
Trigger: GCCCCATGCGGAGCTCCGTCAGGGTGATTGTGTACG...GCTGGCCGGACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTTGTACTGCTGCTGTGTaGACACGGGGGCCTCATCGT +
Preference number: 4 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLCTAAV*TRGPHR
Trigger: ACGATGAGGCCCCCGTGTTCACACAGCAGCAGTACA...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGTCTCGTCCAGCACAGTaGTGTAGACCTTCACGGTGG +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRSRPAQ*CRPSRW
Trigger: CCACCGTGAAGGTCTACATCACTGTGCTGGACGAGA...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCAGGACAGAACACTGTTaGTCCCGATGTCACGGTCAG +
Preference number: 4 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPRTEHC*SRCHGQ
Trigger: CTGACCGTGACATCGGGATCAACAGTGTTCTGTCCT...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTCGATGCGGAAGGTGTTaGCGATGTTGCCTGCGACGA +
Preference number: 4 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLRCGRC*RCCLRR
Trigger: TCGTCGCAGGCAACATCGTCAACACCTTCCGCATCG...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGCCACCACGGTCAGACTaGACTTCTCGTAGGACTGCA +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRPPRSD*TSRRTA
Trigger: TGCAGTCCTACGAGAAGTTCAGTCTGACCGTGGTGG...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp TGCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCCGTTGCCGGCTGCGATaGAGTAGTACACGATCGCGT +
Preference number: 4 (lower is better)
Translates to: CGVELGGRRACLASFSSARCRLR*SSTRSR
Trigger: ACGCGATCGTGTACTACTTCATCGCAGCCGGCAACG...GGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CCTCCTCCTCCTCCTCCTCCTCCTCTTCCTACTCTCGCTCCCTGTCCCCCAGGCGTGGTGGCTGGTCGTTaGTGTCCTCTAGCACAACGC +
Preference number: 4 (lower is better)
Translates to: PPPPPPPPLPTLAPCPPGVVAGR*CPLAQR
Trigger: GCGTTGTGCTAGAGGACATCAACGACCAGCCACCAC...GCCTGGGGGACAGGGAGCGAGAGTAGGAAGAGGAGGAGGAGGAGGAGGAGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp GGGGTGTGGATTTGGCGGATTCTGTGCGGGCGTTGCGCTCGAAGGCAGTGGCCTCACCTGGATCAACTCTaGGCCCACCTTGGCGTCGGT +
Preference number: 4 (lower is better)
Translates to: GVWIWRILCGRCARRQWPHLDQL*AHLGVG
Trigger: ACCGACGCCAAGGTGGGCTCAGAGTTGATCCAGGTG...AGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAATCCACACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCAGCCACAATGGCCTTaGGCTTCCTCTTGTGTACAG +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSQPQWP*ASSCVQ
Trigger: CTGTACACAAGAGGAAGCTCAAGGCCATTGTGGCTG...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp TGCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTTGGCCCCTCACGAATaGTCTGGCCCAGCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: CGVELGGRRACLASFSSALAPHE*SGPAWQ
Trigger: TTGCCAAGCTGGGCCAGATCATTCGTGAGGGGCCAA...GGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp TGGACGTCCAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGCCTCGGGCAGGCTGTTaGGGTCGGTGGCCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: WTSSREGCGGNVARLGLEPRAGC*GRWPAA
Trigger: CGCTGCTGGCCACCGACCTCAACAGCCTGCCCGAGG...CTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTGGACGTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp CGCACACGGTCGGGGATCTCGTTAATGACGATCTTGACGCGCTGGTCGTCCCTCTGGGATCTGAGCAGCTaGTGCGGGCTGCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: RTRSGISLMTILTRWSSLWDLSS*CGLPGP
Trigger: TGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCCCA...GAGGGACGACCAGCGCGTCAAGATCGTCATTAACGAGATCCCCGACCGTGTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GATGAGGCCACATTCCTCCAAGTCACTGCTCTGTCACCCAGACTTGGGGCGGGGAACGTCCAGAGGCTCTaGCACCCCGCGCTCCATGCC +
Preference number: 4 (lower is better)
Translates to: DEATFLQVTALSPRLGAGNVQRL*HPALHA
Trigger: GGCATGGAGCGCGGGGTGGCAGAGCCTCTGGACGTT...CCCCGCCCCAAGTCTGGGTGACAGAGCAGTGACTTGGAGGAATGTGGCCTCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR GCA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGGGCAAAGCCGACCTGTaGCAGCTCAGTGATGGCCAC +
Preference number: 4 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQGKADL*QLSDGH
Trigger: GTGGCCATCACTGAGCTGGCACAGGTCGGCTTTGCC...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp GGGCACAGGGTGGAACAGGAAGAGGGCCTGAGCTTGGGCCCAGCTCCATCACTGGGAGTCTTCATCTGTTaGCCGGAGCCGCACCAGCTG +
Preference number: 4 (lower is better)
Translates to: GHRVEQEEGLSLGPAPSLGVFIC*PEPHQL
Trigger: CAGCTGGTGCGGCTCCGGGCAACAGATGAAGACTCC...CAGTGATGGAGCTGGGCCCAAGCTCAGGCCCTCTTCCTGTTCCACCCTGTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGCCACGTCGTTGTCCGTaGAGTTCAGCCAGACCACCC +
Preference number: 4 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQPRRCP*SSARPP
Trigger: GGGTGGTCTGGCTGAACTGCACGGACAACGACGTGG...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGCTTTCAGCTGCAAGATaGTGTGGCCTTCAGGGATGT +
Preference number: 4 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWLSAAR*CGLQGC
Trigger: ACATCCCTGAAGGCCACAGCATCTTGCAGCTGAAAG...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGAGGGAGAAGACCACCTaGCCATTGCTGCCAGCATCA +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRREKTT*PLLPAS
Trigger: TGATGCTGGCAGCAATGGGCAGGTGGTCTTCTCCCT...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTAATTTTCGCGACGGTTaGTGGCTACATCCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: WTGVGCPASRGCPRWASLNFRDG*WLHPQG
Trigger: ACCCTGGGGATGTAGCCAGCAACCGTCGCGAAAATT...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGACTCCCAGTCCCGGTTaGCCGCAGTCTTCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQTPSPG*PQSSGS
Trigger: GCTTCCTGAAGACTGCGGGCAACCGGGACTGGGAGT...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGCCACCTGCAGCGGCTaGATAGTCTCGTATGGCACT +
Preference number: 4 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPATCSG*IVSYGT
Trigger: AGTGCCATACGAGACTATGCAGCCGCTGCAGGTGGC...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp TGCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCACAACGCGCACCTCCTaGAGTGTGAGGTCAGCAACC +
Preference number: 4 (lower is better)
Translates to: CGVELGGRRACLASFSSATTRTS*SVRSAT
Trigger: GGTTGCTGACCTCACACTGCAGGAGGTGCGCGTTGT...GGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTACAACGCGCACCTCCTaGAGTGTGAGGTCAGCAACC +
Preference number: 4 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPTTRTS*SVRSAT
Trigger: GGTTGCTGACCTCACACTGCAGGAGGTGCGCGTTGT...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACCAAAAGTTCCATGGGTaGGCGTGGGGCTGTTCCACA +
Preference number: 4 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHQKFHG*AWGCST
Trigger: TGTGGAACAGCCCCACGCGCACCCATGGAACTTTTG...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp CCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGATCAGGCTTGACAGCTaGTGGCTCACGCCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: PPLRLLSRRGWCLRGGAGIRLDS*WLTPKS
Trigger: ACTTTTGGGCGTGAGCCAGCAGCTGTCAAGCCTGAT...CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp AGTGGCCTCGGCAGCGGTCAGCGTCTCCAGCGAGCGGCCCAGGCCCTTCTGGTCTTGCACCATCCGCTGTaGAAAGAGCTTTTTGAGCCG +
Preference number: 4 (lower is better)
Translates to: SGLGSGQRLQRAAQALLVLHHPL*KELFEP
Trigger: CGGCTCAAAAAGCTCTTTGCACAGCGGATGGTGCAA...GACCAGAAGGGCCTGGGCCGCTCGCTGGAGACGCTGACCGCTGCCGAGGCCACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642965.1
CDS-3UTR GCA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGAAGCGCAGGCTACCCTaGCCTGGGCTGTGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: WEGGGPVWPLSAQPEPSWKRRLP*PGLWSP
Trigger: AGGAGACCACAGCCCAGGGCAGGGTAGCCTGCGCTT...CCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp TCATCTGCATCCACTGCGCCTGTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGATTCTGTGCGGGCGTTaGGCTCGAAGGCAGTGGCCT +
Preference number: 4 (lower is better)
Translates to: SSASTAPVTLPTRVPRGEILCGR*ARRQWP
Trigger: AGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAAT...CTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCAGATGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp ATTTGGCGGATTCTGTGCGGGCGTTGCGCTCGAAGGCAGTGGCCTCGGCAGCGGATTTGGCGGATTCTGTaGGGGCGTTGCGCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: IWRILCGRCARRQWPRQRIWRIL*GRCARR
Trigger: CCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAAT...CCGCTGCCGAGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp ATTTGGCGGATTCTGTGCGGGCGTTGCGCTCGAAGGCAGTGGCCTCGGCAGCGGTGGGGAGAGGGCGGCTaGATTCAGTCTGCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: IWRILCGRCARRQWPRQRWGEGG*IQSAKA
Trigger: AGCCTTTGCAGACTGAATGCAGCCGCCCTCTCCCCA...CCGCTGCCGAGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GGGCATTTCCAGCAGCTGGAGGTGATGCCACCTGGACTCGGAGGAGGACAGCTCTGCTGTGACCCACAGTaGAGCCAGCCACGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: GHFQQLEVMPPGLGGGQLCCDPQ*SQPRLP
Trigger: GGGGAGACGTGGCTGGCTGCACTGTGGGTCACAGCA...GAGCTGTCCTCCTCCGAGTCCAGGTGGCATCACCTCCAGCTGCTGGAAATGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp GGGCACAGGGTGGAACAGGAAGAGGGCCTGAGCTTGGGCCCAGCTCCATCACTGGCCTTGCCCTCCAGGTaGCAAAGCCCAGCATGGAGA +
Preference number: 4 (lower is better)
Translates to: GHRVEQEEGLSLGPAPSLALPSR*QSPAWR
Trigger: TCTCCATGCTGGGCTTTGGCACCTGGAGGGCAAGGC...CAGTGATGGAGCTGGGCCCAAGCTCAGGCCCTCTTCCTGTTCCACCCTGTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp GGGCACAGGGTGGAACAGGAAGAGGGCCTGAGCTTGGGCCCAGCTCCATCACTGCACCGCCCTCTTGTCTaGATGGCAGATGGGCACAGG +
Preference number: 4 (lower is better)
Translates to: GHRVEQEEGLSLGPAPSLHRPLV*MADGHR
Trigger: CCTGTGCCCATCTGCCATGCAGACAAGAGGGCGGTG...CAGTGATGGAGCTGGGCCCAAGCTCAGGCCCTCTTCCTGTTCCACCCTGTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp CTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCTCGACAAGGACCGTCTaGTGCACTGCGTCTAATGGG +
Preference number: 4 (lower is better)
Translates to: LSAPVTPGTLAEATDPLPSTRTV*CTASNG
Trigger: CCCATTAGACGCAGTGCAGCAGACGGTCCTTGTCGA...GGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp CAAGCCGGCCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCAGCTGATTGTGAAATGTaGGCGCGTTGTCATTCACAT +
Preference number: 4 (lower is better)
Translates to: QAGRAGPEPPQGSRVHAPADCEM*ARCHSH
Trigger: ATGTGAATGACAACGCGCCCACATTTCACAATCAGC...TGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGGCCGGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGCGCGGGCGCTGTCAATaGCGAAGAATTGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: WEGGGPVWPLSAQPEPSWRGRCQ*RRIGRG
Trigger: CCCCCTCCCAATTCTTCGCCATTGACAGCGCCCGCG...CCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GGCCACATTCCTCCAAGTCACTGCTCTGTCACCCAGACTTGGGGCGGGGAGTGGCGCGGGCGCTGTCAATaGCGAAGAATTGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: GHIPPSHCSVTQTWGGEWRGRCQ*RRIGRG
Trigger: CCCCCTCCCAATTCTTCGCCATTGACAGCGCCCGCG...CCACTCCCCGCCCCAAGTCTGGGTGACAGAGCAGTGACTTGGAGGAATGTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp CAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCATGCGGGTGGACAGAGGCCTaGTCTTGTCTTGATCTGTGG +
Preference number: 4 (lower is better)
Translates to: QLPSLPGPLQRQLTPSPCGWTEA*SCLDLW
Trigger: CCACAGATCAAGACAAGACCAGGCCTCTGTCCACCC...GCATGGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCATGTTGTACAGTGGCTaGCTGAAGATGGGCCGGTTG +
Preference number: 4 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPMLYSG*LKMGRL
Trigger: CAACCGGCCCATCTTCAGCCAGCCACTGTACAACAT...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GCTGCCCAGCTCCTGTCCCAGTCAGCTGGCCAGGATCCCACCACAAAGCTGCCCAGCGGTCCAGGTCTGTaGCATTCAGGAACAGCACCG +
Preference number: 4 (lower is better)
Translates to: AAQLLSQSAGQDPTTKLPSGPGL*HSGTAP
Trigger: CGGTGCTGTTCCTGAATGCCACAGACCTGGACCGCT...GGGCAGCTTTGTGGTGGGATCCTGGCCAGCTGACTGGGACAGGAGCTGGGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp GAGTGGGGCTCAGGGCTCCTCCCTAGGAATCATGGGGCCTTACCTCCCTCTAGACCAGCATGGCGTGGGTaGTGCGGATCTTGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: EWGSGLLPRNHGALPPSRPAWRG*CGSCPW
Trigger: CCACGGGCAAGATCCGCACCACCCACGCCATGCTGG...TCTAGAGGGAGGTAAGGCCCCATGATTCCTAGGGAGGAGCCCTGAGCCCCACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp AGGTCCCCAGGGAGCCAGTCCAGAGTGATCCAGCTGCAAAGCCCTTGGGAAGAGATCAGCTCGGCCTCATaGGGGTCGGGGTTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: RSPGSQSRVIQLQSPWEEISSAS*GSGFSR
Trigger: CCGGGAGAACCCCGACCCCCATGAGGCCGAGCTGAT...CTCTTCCCAAGGGCTTTGCAGCTGGATCACTCTGGACTGGCTCCCTGGGGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCTTCACATCCAGCACATaGATGGTGAGCGTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSFTSST*MVSVLV
Trigger: CACCAGCACGCTCACCATCCATGTGCTGGATGTGAA...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTCCGGCCAGCCACCCGGAACTCGCGTaGCACGTCCTCGGACACAGA +
Preference number: 4 (lower is better)
Translates to: GMWRKCSETWTGVGCPASHPELA*HVLGHR
Trigger: TCTGTGTCCGAGGACGTGCCACGCGAGTTCCGGGTG...GCTGGCCGGACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAAGACAGTGGCCGCATGTAGGCGGCTGTaGTCTCCCGGTCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: VDPPASETGAAGCRKTVAACRRL*SPGPGP
Trigger: TGGGCCTGGACCGGGAGACCACAGCCGCCTACATGC...GGCCACTGTCTTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTTCTCGGTCTGTGGCTTaGACCACGATGACTGACGTT +
Preference number: 4 (lower is better)
Translates to: WTGVGCPASRGCPRWASLSRSVA*TTMTDV
Trigger: AACGTCAGTCATCGTGGTCCAAGCCACAGACCGAGA...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGCCTCGTATGAGGCATTaGAGAACTGCACGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRPRMRH*RTARPR
Trigger: ACGAGGCCGTGCAGTTCTCCAATGCCTCATACGAGG...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGCATTGTGGAGCTGAGTaGGGGCATCCCCCGGTCACG +
Preference number: 4 (lower is better)
Translates to: WEGGGPVWPLSAQPEPSWHCGAE*GHPPVT
Trigger: CGTGACCGGGGGATGCCCCCACTCAGCTCCACAATG...CCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp TGCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCCATGGGCGACAAAGCTaGAGACAGGGCTGTTCTCGC +
Preference number: 4 (lower is better)
Translates to: CGVELGGRRACLASFSSAHGRQS*RQGCSR
Trigger: GCGAGAACAGCCCTGTCTCCAGCTTTGTCGCCCATG...GGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTCCAGCTCCCGATTCATaGGGGACTTCACCATTACAG +
Preference number: 4 (lower is better)
Translates to: WTGVGCPASRGCPRWASLPAPDS*GTSPLQ
Trigger: CTGTAATGGTGAAGTCCCCCATGAATCGGGAGCTGG...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCCCAGCTCCCGATTCATaGGGGACTTCACCATTACAG +
Preference number: 4 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPPAPDS*GTSPLQ
Trigger: CTGTAATGGTGAAGTCCCCCATGAATCGGGAGCTGG...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GCGCCTGTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGTGCTCAGGCACTGTCGGGCTTGGAGAACTGTaGCCGGCAGTCATTGACATC +
Preference number: 4 (lower is better)
Translates to: APVTLPTRVPRGECSGTVGLGEL*PAVIDI
Trigger: GATGTCAATGACTGCCGGCCACAGTTCTCCAAGCCC...GACAGTGCCTGAGCACTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGGGAGACGCTTGTGCTGAACTaGGGCTTGGAGAACTGTGGC +
Preference number: 4 (lower is better)
Translates to: LRLLSRRGWCLRGGAGRETLVLN*GLENCG
Trigger: GCCACAGTTCTCCAAGCCCCAGTTCAGCACAAGCGT...CTCCCTCCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCTTGGGACCTTCATCCTaGTCAGTGGCCATCATGGTG +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSLGPSS*SVAIMV
Trigger: CACCATGATGGCCACTGACCAGGATGAAGGTCCCAA...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGAGGTCAACTCTCCATTaGGACCTTCATCCTGGTCAG +
Preference number: 4 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWRSTLH*DLHPGQ
Trigger: CTGACCAGGATGAAGGTCCCAATGGAGAGTTGACCT...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp GGATCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGGAGTCCATGTCCACATaGAAGGCCTCCACGCCAGGG +
Preference number: 4 (lower is better)
Translates to: GSEQLMRAARAKPRLSPRESMST*KASTPG
Trigger: CCCTGGCGTGGAGGCCTTCCATGTGGACATGGACTC...CCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTCTCGTAGGACTGCAGTaGCCGCTGTGTGGTCACCAA +
Preference number: 4 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPLVGLQ*PLCGHQ
Trigger: TTGGTGACCACACAGCGGCCACTGCAGTCCTACGAG...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TGCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCCTCGTAGGACTGCAGTaGCCGCTGTGTGGTCACCAA +
Preference number: 4 (lower is better)
Translates to: CGVELGGRRACLASFSSALVGLQ*PLCGHQ
Trigger: TTGGTGACCACACAGCGGCCACTGCAGTCCTACGAG...GGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CCTGGATCAACTCTGAGCCCACCTTGGCGTCGGTGGCCACCCCTGCAGTGTACTGATGGTGCCGTTGGGTaGGCGCACAAAGACAGGGCG +
Preference number: 4 (lower is better)
Translates to: PGSTLSPPWRRWPPLQCTDGAVG*AHKDRA
Trigger: CGCCCTGTCTTTGTGCGCCCACCCAACGGCACCATC...AGTACACTGCAGGGGTGGCCACCGACGCCAAGGTGGGCTCAGAGTTGATCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGAGGATGGTGCCGTTaGGTGGGCGCACAAAGACAG +
Preference number: 4 (lower is better)
Translates to: SEQLMRAARAKPRLSPRPGGWCR*VGAQRQ
Trigger: CTGTCTTTGTGCGCCCACCCAACGGCACCATCCTCC...AGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp ATTTGGCGGATTCTGTGCGGGCGTTGCGCTCGAAGGCAGTGGCCTCGGCAGCGGAGACCTCGTACACGTTaGAGCGCAGCGGGATCTCCT +
Preference number: 4 (lower is better)
Translates to: IWRILCGRCARRQWPRQRRPRTR*SAAGSP
Trigger: AGGAGATCCCGCTGCGCTCCAACGTGTACGAGGTCT...CCGCTGCCGAGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTCTGCATAGTCTCGTATaGCACTGGCTGGCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLLHSLV*HWLAQV
Trigger: GACCTGGGCCAGCCAGTGCCATACGAGACTATGCAG...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGAGTACACGATCGCGTTaGGGCCCTCATCTGCATCCA +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRSTRSR*GPHLHP
Trigger: TGGATGCAGATGAGGGCCCCAACGCGATCGTGTACT...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTGAAGCGTGGTGGCTaGTCGTTGATGTCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRVKRGG*SLMSSS
Trigger: GCTAGAGGACATCAACGACCAGCCACCACGCTTCAC...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACCTTGGTGAAGCGTGGTaGCTGGTCGTTGATGTCCTC +
Preference number: 4 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHLGEAW*LVVDVL
Trigger: GAGGACATCAACGACCAGCCACCACGCTTCACCAAG...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CTCGTAGTCCACTGTCCGGTTGGCAATGACCTTCCCTGCCGAGGAGTCCTCCAGACTCTGAGCCCACCTTaGCGTCGGTGGCCACCCCTG +
Preference number: 4 (lower is better)
Translates to: LVVHCPVGNDLPCRGVLQTLSPP*RRWPPL
Trigger: CAGGGGTGGCCACCGACGCCAAGGTGGGCTCAGAGT...CTGGAGGACTCCTCGGCAGGGAAGGTCATTGCCAACCGGACAGTGGACTACGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GGATCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGTCCAGGGCCAGCACCTaGATCAACTCTGAGCCCACC +
Preference number: 4 (lower is better)
Translates to: GSEQLMRAARAKPRLSPRSRAST*INSEPT
Trigger: GGTGGGCTCAGAGTTGATCCAGGTGCTGGCCCTGGA...CCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGTCCAGGGCCAGCACCTaGATCAACTCTGAGCCCACC +
Preference number: 4 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQSRAST*INSEPT
Trigger: GGTGGGCTCAGAGTTGATCCAGGTGCTGGCCCTGGA...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGCCCATGGTGAAGACCTaGCCCACATCTTCAGAGTCG +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRPMVKT*PTSSES
Trigger: CGACTCTGAAGATGTGGGCCAGGTCTTCACCATGGG...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GCCTTGGTGAAGCGTGGTGGCTGGTCGTTGATGTCCTCTAGCACAACGCGCACCATGGCCGTGTCGTTGTaGCCTGCCAGGTCTCGGGCC +
Preference number: 4 (lower is better)
Translates to: ALVKRGGWSLMSSSTTRTMAVSL*PARSRA
Trigger: GGCCCGAGACCTGGCAGGCCACAACGACACGGCCAT...GGTGCGCGTTGTGCTAGAGGACATCAACGACCAGCCACCACGCTTCACCAAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCTCGCGGTTCACCACGTaGATAAGCAGTTCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPSRFTT*ISSSVC
Trigger: GCAGACAGAACTGCTTATCCACGTGGTGAACCGCGA...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGTGTCATACTCCTGGATaGCAGCCCGCAGGTATCGGT +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRCHTPG*QPAGIG
Trigger: ACCGATACCTGCGGGCTGCCATCCAGGAGTATGACA...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGATGTTGTCATACTCCTaGATGGCAGCCCGCAGGTAT +
Preference number: 4 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWMLSYS*MAARRY
Trigger: ATACCTGCGGGCTGCCATCCAGGAGTATGACAACAT...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp AGTGGCCTCGGCAGCGGTCAGCGTCTCCAGCGAGCGGCCCAGGCCCTTCTGGTCATGTTGTCATACTCCTaGATGGCAGCCCGCAGGTAT +
Preference number: 4 (lower is better)
Translates to: SGLGSGQRLQRAAQALLVMLSYS*MAARRY
Trigger: ATACCTGCGGGCTGCCATCCAGGAGTATGACAACAT...GACCAGAAGGGCCTGGGCCGCTCGCTGGAGACGCTGACCGCTGCCGAGGCCACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGGGAGCAGCGAGCCCTTGATTaGCCCCTCACGAATGATCTG +
Preference number: 4 (lower is better)
Translates to: LRLLSRRGWCLRGGAGREQRALD*PLTNDL
Trigger: CAGATCATTCGTGAGGGGCCAATCAAGGGCTCGCTG...CTCCCTCCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000224721.12
ENST00000398788.4
CDS-3UTR CCA 90 bp CCGGTTGGCAATGACCTTCCCTGCCGAGGAGTCCTCCAGCTGGACATACCCTGGTCCACTGGTGGCTTGTaGCGGAAGCGCAGGCTACCC +
Preference number: 4 (lower is better)
Translates to: PVGNDLPCRGVLQLDIPWSTGGL*RKRRLP
Trigger: GGGTAGCCTGCGCTTCCGCCACAAGCCACCAGTGGA...CCAGGGTATGTCCAGCTGGAGGACTCCTCGGCAGGGAAGGTCATTGCCAACCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TGCAGTGTGAGGTCAGCAACCAGGTCGAGGGTTGGGGAGGGTCCACGGGGAGGTCTTGAGCTCCACTGGTaGCTTGTGGCGGAAGCGCAG +
Preference number: 4 (lower is better)
Translates to: CSVRSATRSRVGEGPRGGLELHW*LVAEAQ
Trigger: CTGCGCTTCCGCCACAAGCCACCAGTGGAGCTCAAG...ACCTCCCCGTGGACCCTCCCCAACCCTCGACCTGGTTGCTGACCTCACACTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CCTGGATCAACTCTGAGCCCACCTTGGCGTCGGTGGCCACCCCTGCAGTGTACTCCCCTTGAGCTCCACTaGTGGCTTGTGGCGGAAGCG +
Preference number: 4 (lower is better)
Translates to: PGSTLSPPWRRWPPLQCTPLELH*WLVAEA
Trigger: CGCTTCCGCCACAAGCCACCAGTGGAGCTCAAGGGG...AGTACACTGCAGGGGTGGCCACCGACGCCAAGGTGGGCTCAGAGTTGATCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGCTGCCGTGCACCACATaGATCCCATCGGGCCCCTTG +
Preference number: 4 (lower is better)
Translates to: WEGGGPVWPLSAQPEPSWLPCTT*IPSGPL
Trigger: CAAGGGGCCCGATGGGATCCATGTGGTGCACGGCAG...CCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TTGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCGCGCACACGGTCGGGGATCGGAGGGGACGGTGGATaGGTGCTGCTCACACCCACA +
Preference number: 4 (lower is better)
Translates to: LESRWMNSSSKPRTRSGIGGDGG*VLLTPT
Trigger: TGTGGGTGTGAGCAGCACCCATCCACCGTCCCCTCC...GATCCCCGACCGTGTGCGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAAATGTAGCGAGACTTaGACTGGAGTCGGGTGTCCG +
Preference number: 4 (lower is better)
Translates to: PPLRLLSRRGWCLRGGAGKCSET*TGVGCP
Trigger: CGGACACCCGACTCCAGTCCAAGTCTCGCTACATTT...CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGACTTTCTTGTCCACGTaGGGATGCCACCTCCACCTG +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRTFLST*GCHLHL
Trigger: CAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGT...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp TTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGGGAGACTTTCTTGTCCACGTaGGGATGCCACCTCCACCTG +
Preference number: 4 (lower is better)
Translates to: LRLLSRRGWCLRGGAGRETFLST*GCHLHL
Trigger: CAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGT...CTCCCTCCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp CATCTGCATCCACTGCGCCTGTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGTACCATTACAGATCCCTaGGCCGCCTCCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: HLHPLRLSRCPRGCRVVSTITDP*AASSSS
Trigger: GGAGGAGGAGGAGGCGGCCCAGGGATCTGTAATGGT...ACTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCAGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GCTGCCCAGCTCCTGTCCCAGTCAGCTGGCCAGGATCCCACCACAAAGCTGCCCCCTGTCCCAGTCAGCTaGCCAGGATCCCACCACAAA +
Preference number: 4 (lower is better)
Translates to: AAQLLSQSAGQDPTTKLPPVPVS*PGSHHK
Trigger: TTTGTGGTGGGATCCTGGCCAGCTGACTGGGACAGG...GGGCAGCTTTGTGGTGGGATCCTGGCCAGCTGACTGGGACAGGAGCTGGGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp GTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAAGACAGTGGCCTGGCAGCCGTCTTGGTaGCCCCTCTTCAGGGCACCC +
Preference number: 4 (lower is better)
Translates to: VDPPASETGAAGCRKTVAWQPSW*PLFRAP
Trigger: GGGTGCCCTGAAGAGGGGCCACCAAGACGGCTGCCA...GGCCACTGTCTTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp GACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGGGAGCCCCGGAGAAGTTGCCAAATaGCAAAGGTTCCCTTTAGTC +
Preference number: 4 (lower is better)
Translates to: DPSRRRAHECMPHHPGSPGEVAK*QRFPLV
Trigger: GACTAAAGGGAACCTTTGCCATTTGGCAACTTCTCC...GGGGCTCCCAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp CTCGGGAGGCACCACCAGAGGCTAAAGCCCAACAGTAGAGCCCTGACCTCTTTTATGCCCAGGCCGGGCTaGCTAGCCCCGACCACCTCA +
Preference number: 4 (lower is better)
Translates to: LGRHHQRLKPNSRALTSFMPRPG*LAPTTS
Trigger: TGAGGTGGTCGGGGCTAGTCAGCCCGGCCTGGGCAT...AAAAGAGGTCAGGGCTCTACTGTTGGGCTTTAGCCTCTGGTGGTGCCTCCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR TCA 90 bp TGCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCAGGTCAGCACTCCGCTaGTGTAGTCCAGGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: CGVELGGRRACLASFSSARSALR*CSPGQR
Trigger: TCTTTGCCCTGGACTACATCAGCGGAGTGCTGACCT...GGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp TGCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCCCTTCACAGTCAGGATaGAGCCATGGCTGTACAGGG +
Preference number: 4 (lower is better)
Translates to: CGVELGGRRACLASFSSAPSQSG*SHGCTG
Trigger: CCCTGTACAGCCATGGCTTCATCCTGACTGTGAAGG...GGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp CAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCATGCTGTACTCGGAGCTGTTaGACTCCGGGGCATTGTCAT +
Preference number: 4 (lower is better)
Translates to: QLPSLPGPLQRQLTPSPCCTRSC*TPGHCH
Trigger: ATGACAATGCCCCGGAGTTCAACAGCTCCGAGTACA...GCATGGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp TTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCCTGTGCCAGCTCAGTaGTGGCCACGCTGTACTCGG +
Preference number: 4 (lower is better)
Translates to: FGLFQLSLSQAGPQTLGPPVPAQ*WPRCTR
Trigger: CCGAGTACAGCGTGGCCATCACTGAGCTGGCACAGG...GGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp CGATGCAGGGAGGGGAGCATTGCCAGCCTCCCACGCTTCTGTCCCTCCCAAGCCTGTCCACCACCTGGATaGAGAGTGGAAGGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: RCREGSIASLPRFCPSQACPPPG*RVEGQS
Trigger: GCTTTGCCCTTCCACTCTTCATCCAGGTGGTGGACA...GGCTTGGGAGGGACAGAAGCGTGGGAGGCTGGCAATGCTCCCCTCCCTGCATCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR TCA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACCTTCCAAGGAGTAGATaGTGGACTCCTGGCCGTACT +
Preference number: 4 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHLPRSR*WTPGRT
Trigger: AGTACGGCCAGGAGTCCATCATCTACTCCTTGGAAG...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp ACCTTGGTAGATGCTCCCCGTCCCTGCAACCAACAGGTTCAGGAGGTCCCCAGGCCCCTGAGCGGGCATTaGTCCGAAACTGGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: TLVDAPRPCNQQVQEVPRPLSGH*SETGWS
Trigger: GCTCCACCCAGTTTCGGATCAATGCCCGCTCAGGGG...CCTGGGGACCTCCTGAACCTGTTGGTTGCAGGGACGGGGAGCATCTACCAAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR TCA 90 bp CTGCCTTTGAGCTTCTGTCTTGTTGCTGTTGCAGGAGCCATGAGCACAGAGGGCCCAGCTCGGTGGTGGTaGCCACCACGCCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LPLSFCLVAVAGAMSTEGPARWW*PPRRCC
Trigger: GCAGCAGCGGCGTGGTGGTCACCACCACCGAGCTGG...GCCCTCTGTGCTCATGGCTCCTGCAACAGCAACAAGACAGAAGCTCAAAGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGTCAGGAGCCCATTGCTaGCATGGATCCGGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRSGAHC*HGSGSC
Trigger: ACAACTTCCGGATCCATGTCAGCAATGGGCTCCTGA...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp GGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTCCGGCCAGCCAGGGTCGTTGTCGTTaGTGTCCAGCACCCGGATCC +
Preference number: 4 (lower is better)
Translates to: GMWRKCSETWTGVGCPASQGRCR*CPAPGS
Trigger: GGATCCGGGTGCTGGACATCAACGACAACGACCCTG...GCTGGCCGGACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp GAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCTCTGTGGCTGTGACTTaGAGGACTGAGAATCCAGGC +
Preference number: 4 (lower is better)
Translates to: EQLMRAARAKPRLSPRPGSVAVT*RTENPG
Trigger: GCCTGGATTCTCAGTCCTTCAAGTCACAGCCACAGA...GCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGCATCGATCAGAATGGTaGCAATGGCTGTGCCCGAGA +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRHRSEW*QWLCPR
Trigger: TCTCGGGCACAGCCATTGTCACCATTCTGATCGATG...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCAATCACTGAGAGAGTaGCCTCATAGGTGGCAACCA +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSQSLRE*PHRWQP
Trigger: TGGTTGCCACCTATGAGGTCACTCTCTCAGTGATTG...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp GGCCACAATGTCCACCACGAAGTAGCCGGGGCTGTAGGCCATGAAGAGGTCGAACGGCTGCCACAGCAATaGGTGTGGTCCCAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: GHNVHHEVAGAVGHEEVERLPQQ*VWSQGW
Trigger: CCACCCCTGGGACCACACTCATTGCTGTGGCAGCCG...TTCGACCTCTTCATGGCCTACAGCCCCGGCTACTTCGTGGTGGACATTGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp GGGGGTCTCCATGATCACGTCGCGAAGTTTGTGCAGGGGTGTGGATTTGGCGGACGGCTGCCACAGCAATaGGTGTGGTCCCAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: GGLHDHVAKFVQGCGFGGRLPQQ*VWSQGW
Trigger: CCACCCCTGGGACCACACTCATTGCTGTGGCAGCCG...TCCGCCAAATCCACACCCCTGCACAAACTTCGCGACGTGATCATGGAGACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGCTGTCCGGTTGGCAATaGCCTTCCCTGCCGAGGAGT +
Preference number: 4 (lower is better)
Translates to: WEGGGPVWPLSAQPEPSWLSGWQ*PSLPRS
Trigger: ACTCCTCGGCAGGGAAGGTCATTGCCAACCGGACAG...CCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp TTGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCGCGCACACGGTCGGGGATCCGGGGACCCGTTGTCTaGGGCCCTCACGGTAAAGTT +
Preference number: 4 (lower is better)
Translates to: LESRWMNSSSKPRTRSGIRGPVV*GPHGKV
Trigger: AACTTTACCGTGAGGGCCTCAGACAACGGGTCCCCG...GATCCCCGACCGTGTGCGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp ATGTTGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCGCGCACACGGTCGGGGCGGGGACCCGTTGTCTaGGGCCCTCACGGTAAAGTT +
Preference number: 4 (lower is better)
Translates to: MLESRWMNSSSKPRTRSGRGPVV*GPHGKV
Trigger: AACTTTACCGTGAGGGCCTCAGACAACGGGTCCCCG...CCCCGACCGTGTGCGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp TCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTCACCCGTGGTGGGGTTaGTGGCAAACTTGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: SEQLMRAARAKPRLSPRPHPWWG*WQTCSL
Trigger: GAGAGAGCAAGTTTGCCATCAACCCCACCACGGGTG...AGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACCATACACGCTTGTGCTaGACTGGGGCTTGGAGAACT +
Preference number: 4 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHHTRLC*TGAWRT
Trigger: AGTTCTCCAAGCCCCAGTTCAGCACAAGCGTGTATG...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp ATGTTGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCGCGCACACGGTCGGGGGCGGGATCTCCTCTCTaGTGTGGAGGATGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: MLESRWMNSSSKPRTRSGAGSPL*CGGWCR
Trigger: ACGGCACCATCCTCCACATCAGAGAGGAGATCCCGC...CCCCGACCGTGTGCGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAACAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp TCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGTGGTGGCTGGTCGTTaGTGTCCTCTAGCACAACGC +
Preference number: 4 (lower is better)
Translates to: SEQLMRAARAKPRLSPRPVVAGR*CPLAQR
Trigger: GCGTTGTGCTAGAGGACATCAACGACCAGCCACCAC...AGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGCACCTGGATCAACTCTaGGCCCACCTTGGCGTCGGT +
Preference number: 4 (lower is better)
Translates to: WEGGGPVWPLSAQPEPSWHLDQL*AHLGVG
Trigger: ACCGACGCCAAGGTGGGCTCAGAGTTGATCCAGGTG...CCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CTGCAGTGGCCGCTGTGTGGTCACCAAGCCCGAGTCCATGTCCACATGGAAGGCCACCTGGATCAACTCTaGGCCCACCTTGGCGTCGGT +
Preference number: 4 (lower is better)
Translates to: LQWPLCGHQARVHVHMEGHLDQL*AHLGVG
Trigger: ACCGACGCCAAGGTGGGCTCAGAGTTGATCCAGGTG...GCCTTCCATGTGGACATGGACTCGGGCTTGGTGACCACACAGCGGCCACTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp TCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGATGTAGATGCCGATaGTGGCCGTGTCGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: SEQLMRAARAKPRLSPRPGCRCR*WPCRCG
Trigger: GCCACAACGACACGGCCATCATCGGCATCTACATCC...AGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp GGATCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGGGATGTAGATGCCGATaGTGGCCGTGTCGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: GSEQLMRAARAKPRLSPRGCRCR*WPCRCG
Trigger: GCCACAACGACACGGCCATCATCGGCATCTACATCC...CCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGGGATGTAGATGCCGATaGTGGCCGTGTCGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQGCRCR*WPCRCG
Trigger: GCCACAACGACACGGCCATCATCGGCATCTACATCC...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp GAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCAGCCACAATGGCCTTaGGCTTCCTCTTGTGTACAG +
Preference number: 4 (lower is better)
Translates to: EQLMRAARAKPRLSPRPGQPQWP*ASSCVQ
Trigger: CTGTACACAAGAGGAAGCTCAAGGCCATTGTGGCTG...GCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGGGTCATCATCAGGCTTaGCAGCTGCTGGCTCACGCC +
Preference number: 4 (lower is better)
Translates to: WEGGGPVWPLSAQPEPSWGHHQA*QLLAHA
Trigger: GGCGTGAGCCAGCAGCTGTCAAGCCTGATGATGACC...CCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGTTGGCCCCTCACGAATaGTCTGGCCCAGCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQLAPHE*SGPAWQ
Trigger: TTGCCAAGCTGGGCCAGATCATTCGTGAGGGGCCAA...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp TCATCAGGCTTGACAGCTGCTGGCTCACGCCCAAAAGTTCCATGGGTGCGCGTGTGGGATCTGAGCAGCTaGTGCGGGCTGCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: SSGLTAAGSRPKVPWVRVWDLSS*CGLPGP
Trigger: TGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCCCA...CACGCGCACCCATGGAACTTTTGGGCGTGAGCCAGCAGCTGTCAAGCCTGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp TTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGGGAGAGGTCAGATGCTGAATaGGCGTCTGGCAAAAGTGGG +
Preference number: 4 (lower is better)
Translates to: LRLLSRRGWCLRGGAGRERSDAE*ASGKSG
Trigger: CCCACTTTTGCCAGACGCTCATTCAGCATCTGACCT...CTCCCTCCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp GGATCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGTGGGCCTGCCAGCCATaGGGAAGAGAGAAGAGGGTT +
Preference number: 4 (lower is better)
Translates to: GSEQLMRAARAKPRLSPRWACQP*GREKRV
Trigger: AACCCTCTTCTCTCTTCCTCATGGCTGGCAGGCCCA...CCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGTGGGCCTGCCAGCCATaGGGAAGAGAGAAGAGGGTT +
Preference number: 4 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQWACQP*GREKRV
Trigger: AACCCTCTTCTCTCTTCCTCATGGCTGGCAGGCCCA...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp ATGCGGACAGGCCACCGCCCTCTTGTCTGCATGGCAGATGGGCACAGGGTGGAACTTCTGTGTACAGAGTaGAGCGTGGCCCAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: MRTGHRPLVCMADGHRVELLCTE*SVAQPG
Trigger: CCCAGGCTGGGCCACGCTTCACTCTGTACACAGAAG...TTCCACCCTGTGCCCATCTGCCATGCAGACAAGAGGGCGGTGGCCTGTCCGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR TCA 90 bp GGGCATTTCCAGCAGCTGGAGGTGATGCCACCTGGACTCGGAGGAGGACAGCTCAACAGGAAGAGGGCCTaGGCTTGGGCCCAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: GHFQQLEVMPPGLGGGQLNRKRA*AWAQLH
Trigger: ATGGAGCTGGGCCCAAGCTCAGGCCCTCTTCCTGTT...GAGCTGTCCTCCTCCGAGTCCAGGTGGCATCACCTCCAGCTGCTGGAAATGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp AGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCACCTCGCCTCGGGCTCTaGTCTCCGCCGGATCGGCCC +
Preference number: 4 (lower is better)
Translates to: SLSSSWDYRYLTPHLAISPRLGL*SPPDRP
Trigger: GGGCCGATCCGGCGGAGAGCAGAGCCCGAGGCGAGG...TGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp AATCATGGGGCCTTACCTCCCTCTAGAATGAACCTTGGTAGATGCTCCCCGTCCCTCCGTGTGCGTGTGTaGAGCGGCGCCGCGCCTCGC +
Preference number: 4 (lower is better)
Translates to: NHGALPPSRMNLGRCSPSLRVRV*SGAAPR
Trigger: GCGAGGCGCGGCGCCGCTGCACACACGCACACGGAG...GGACGGGGAGCATCTACCAAGGTTCATTCTAGAGGGAGGTAAGGCCCCATGATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR GCA 90 bp AGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCACTCCGTGTGCGTGTGTaGAGCGGCGCCGCGCCTCGC +
Preference number: 4 (lower is better)
Translates to: SLSSSWDYRYLTPHLAISLRVRV*SGAAPR
Trigger: GCGAGGCGCGGCGCCGCTGCACACACGCACACGGAG...TGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACGTGTATTCTCAGGGATaGGGACGCTGTAGGGCTGAT +
Preference number: 4 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHVYSQG*GRCRAD
Trigger: ATCAGCCCTACAGCGTCCGCATCCCTGAGAATACAC...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp TCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTTGCTGTACACCAGGGTaGCATTCTCCCCCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: SEQLMRAARAKPRLSPRPCCTPG*HSPPGL
Trigger: CAGACCTGGGGGAGAATGGCACCCTGGTGTACAGCA...AGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGCGCTGGCCTCATAGCTaGTCTGCAGAAAGATGGGCC +
Preference number: 4 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQRWPHS*SAERWA
Trigger: GGCCCATCTTTCTGCAGAGCAGCTATGAGGCCAGCG...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCGGATCCGGAAGTTGTTaGCATGGTTACCATGGAGGA +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSGSGSC*HGYHGG
Trigger: TCCTCCATGGTAACCATGGCAACAACTTCCGGATCC...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp GGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTCCGGCCAGCCCCAGACGGCTGTACTaGTGCTGTGTGAACACGGGG +
Preference number: 4 (lower is better)
Translates to: GMWRKCSETWTGVGCPASPRRLY*CCVNTG
Trigger: CCCCGTGTTCACACAGCAGCAGTACAGCCGTCTGGG...GCTGGCCGGACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp CCTGGATCAACTCTGAGCCCACCTTGGCGTCGGTGGCCACCCCTGCAGTGTACTACTCCCAGTCCCGGTTaGCCGCAGTCTTCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: PGSTLSPPWRRWPPLQCTTPSPG*PQSSGS
Trigger: GCTTCCTGAAGACTGCGGGCAACCGGGACTGGGAGT...AGTACACTGCAGGGGTGGCCACCGACGCCAAGGTGGGCTCAGAGTTGATCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GGATCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGGCCACCTGCAGCGGCTaGATAGTCTCGTATGGCACT +
Preference number: 4 (lower is better)
Translates to: GSEQLMRAARAKPRLSPRATCSG*IVSYGT
Trigger: AGTGCCATACGAGACTATGCAGCCGCTGCAGGTGGC...CCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp TCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTCTCATCTGCATCCACTaGGCCTGTCACGTTGCCCAC +
Preference number: 4 (lower is better)
Translates to: SEQLMRAARAKPRLSPRPLICIH*ACHVAH
Trigger: GTGGGCAACGTGACAGGCGCAGTGGATGCAGATGAG...AGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp CCGCAGGTAATCCTCCAGGACCACCTTCAGCAGCGAGCCCTTGATTGGCCCCTCGTTGGGGCCCTCATCTaGATCCACTGCGCCTGTCAC +
Preference number: 4 (lower is better)
Translates to: PQVILQDHLQQRALDWPLVGALI*IHCACH
Trigger: GTGACAGGCGCAGTGGATGCAGATGAGGGCCCCAAC...GAGGGGCCAATCAAGGGCTCGCTGCTGAAGGTGGTCCTGGAGGATTACCTGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642965.1
CDS-3UTR GCA 90 bp CGTTGGGGCCCTCATCTGCATCCACTGCGCCTGTCACGTTGCCCACGAGGGTGCGTTGTTGCCAATGTCTaGATCCAGGGCCAGCACCTG +
Preference number: 4 (lower is better)
Translates to: RWGPHLHPLRLSRCPRGCVVANV*IQGQHL
Trigger: CAGGTGCTGGCCCTGGATGCAGACATTGGCAACAAC...GCACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCAGATGAGGGCCCCAACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTCCGGCCAGCCGTGTCGTTGTGGCCTaGCAGGTCTCGGGCCACAAT +
Preference number: 4 (lower is better)
Translates to: GMWRKCSETWTGVGCPASRVVVA*QVSGHN
Trigger: ATTGTGGCCCGAGACCTGGCAGGCCACAACGACACG...GCTGGCCGGACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp GGGGTGTGGATTTGGCGGATTCTGTGCGGGCGTTGCGCTCGAAGGCAGTGGCCTGGTCCACGTCCAGGATaGGGTTGGTATCGCGGTTCA +
Preference number: 4 (lower is better)
Translates to: GVWIWRILCGRCARRQWPGPRPG*GWYRGS
Trigger: TGAACCGCGATACCAACCGCATCCTGGACGTGGACC...AGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAATCCACACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp CTCATCGATCATCTGGATCACCCGGTCCACGTCCAGGATGCGGTTGGTATCGCGCCAGCAGCGTGCCCGTaGTGCCGTGCACCACATGGA +
Preference number: 4 (lower is better)
Translates to: LIDHLDHPVHVQDAVGIAPAACP*CRAPHG
Trigger: TCCATGTGGTGCACGGCAGCACGGGCACGCTGCTGG...CGCGATACCAACCGCATCCTGGACGTGGACCGGGTGATCCAGATGATCGATGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GCAATGTTGTCATACTCCTGGATGGCAGCCCGCAGGTATCGGTCATCATCAGGCCGGTGGCCAGCAGCGTaGCCGTGCTGCCGTGCACCA +
Preference number: 4 (lower is better)
Translates to: AMLSYSWMAARRYRSSSGRWPAA*PCCRAP
Trigger: TGGTGCACGGCAGCACGGGCACGCTGCTGGCCACCG...GCCTGATGATGACCGATACCTGCGGGCTGCCATCCAGGAGTATGACAACATTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTCCGGCCAGCATTCTGTGCGGGCGTTaGGCTCGAAGGCAGTGGCCT +
Preference number: 4 (lower is better)
Translates to: GMWRKCSETWTGVGCPASILCGR*ARRQWP
Trigger: AGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAAT...GCTGGCCGGACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTTGTCCACGTGGGGATaGCACCTCCACCTGGACGTC +
Preference number: 4 (lower is better)
Translates to: WEGGGPVWPLSAQPEPSWLSTWG*HLHLDV
Trigger: GACGTCCAGGTGGAGGTGGCATCCCCACGTGGACAA...CCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp GGGCCCAGCCAGTGCTCTCCAGGTGGCCCTGCTCATCTGTACCCTCTGGTCATGGGGTGTCCACAAACATaGCCCCACATCCCCCTAGGT +
Preference number: 4 (lower is better)
Translates to: GPSQCSPGGPAHLYPLVMGCPQT*PHIPLG
Trigger: ACCTAGGGGGATGTGGGGGCATGTTTGTGGACACCC...CATGACCAGAGGGTACAGATGAGCAGGGCCACCTGGAGAGCACTGGCTGGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp CCCTCGCCTTTCTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGGGGTGTCCACAAACATaGCCCCACATCCCCCTAGGT +
Preference number: 4 (lower is better)
Translates to: PSPFSQLPSLPGPLQRQLGCPQT*PHIPLG
Trigger: ACCTAGGGGGATGTGGGGGCATGTTTGTGGACACCC...CAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAGAAAGGCGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp CTGCCTTTGAGCTTCTGTCTTGTTGCTGTTGCAGGAGCCATGAGCACAGAGGGCTCCCTCGACAGCCCCTaGCGGGCCCCGAGGACAACC +
Preference number: 4 (lower is better)
Translates to: LPLSFCLVAVAGAMSTEGSLDSP*RAPRTT
Trigger: GGTTGTCCTCGGGGCCCGGCAGGGGCTGTCGAGGGA...GCCCTCTGTGCTCATGGCTCCTGCAACAGCAACAAGACAGAAGCTCAAAGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp GGGCACAGGGTGGAACAGGAAGAGGGCCTGAGCTTGGGCCCAGCTCCATCACTGAGGGACCCTGGCAGCTaGGGCCTCTTACCATCCATA +
Preference number: 4 (lower is better)
Translates to: GHRVEQEEGLSLGPAPSLRDPGS*GLLPSI
Trigger: TATGGATGGTAAGAGGCCGCAGCTGCCAGGGTCCCT...CAGTGATGGAGCTGGGCCCAAGCTCAGGCCCTCTTCCTGTTCCACCCTGTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp CCTAGGTCTACCTGTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGAGAGGGCCCAGCCAGTaGTCTCCAGGTGGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: PRSTCRSSCFRDRCCRLQRGPSQ*SPGGPA
Trigger: AGCAGGGCCACCTGGAGAGCACTGGCTGGGCCCTCT...CTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGACCTAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp AGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAGCCGGGGGCTCGGACTaGGCGCGCCCCAAACGTCCA +
Preference number: 4 (lower is better)
Translates to: SLSSSWDYRYLTPHLAISAGGSD*ARPKRP
Trigger: TGGACGTTTGGGGCGCGCCCAGTCCGAGCCCCCGGC...TGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp CCCTCGCCTTTCTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGAAAAGCCAGGCCACGTaGCAGCTGGTGGCAACATGG +
Preference number: 4 (lower is better)
Translates to: PSPFSQLPSLPGPLQRQLKSQAT*QLVATW
Trigger: CCATGTTGCCACCAGCTGCCACGTGGCCTGGCTTTT...CAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAGAAAGGCGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp TCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTCGTGTGATCACCCCCTaGTGGTCGCTGACAGAGAAC +
Preference number: 4 (lower is better)
Translates to: SEQLMRAARAKPRLSPRPRVITP*WSLTEN
Trigger: GTTCTCTGTCAGCGACCACCAGGGGGTGATCACACG...AGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GGATCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCAAGTTGGCCAGGGTaGACAGAGGCCTGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: GSEQLMRAARAKPRLSPRPSWPG*TEAWSC
Trigger: ACAAGACCAGGCCTCTGTCCACCCTGGCCAACTTGG...CCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp CCCTCGCCTTTCTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGCCAAGTTGGCCAGGGTaGACAGAGGCCTGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: PSPFSQLPSLPGPLQRQLPSWPG*TEAWSC
Trigger: ACAAGACCAGGCCTCTGTCCACCCTGGCCAACTTGG...CAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAGAAAGGCGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp TTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGGGAGTATTCCCTGAAACGATaGTGTAGCCAATGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: LRLLSRRGWCLRGGAGREYSLKR*CSQCPG
Trigger: CCCGGGGCATTGGCTACACCATCGTTTCAGGGAATA...CTCCCTCCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GGGCACAGGGTGGAACAGGAAGAGGGCCTGAGCTTGGGCCCAGCTCCATCACTGCCAGTTTTCTGGTTGTaGCCCACACCCCCGTCCACT +
Preference number: 4 (lower is better)
Translates to: GHRVEQEEGLSLGPAPSLPVFWL*PTPPST
Trigger: AGTGGACGGGGGTGTGGGCCACAACCAGAAAACTGG...CAGTGATGGAGCTGGGCCCAAGCTCAGGCCCTCTTCCTGTTCCACCCTGTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCGTAGAACTTGTTGGGTaGCTGGATGCTGTACACCAG +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSVELVG*LDAVHQ
Trigger: CTGGTGTACAGCATCCAGCCACCCAACAAGTTCTAC...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp CCCAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCGCCACCACCCGCAGCTaGTACTCCGCGATGCGCTCG +
Preference number: 4 (lower is better)
Translates to: PSLSSSWDYRYLTPHLAIATTRS*YSAMRS
Trigger: CGAGCGCATCGCGGAGTACCAGCTGCGGGTGGTGGC...GATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp ATGCGGACAGGCCACCGCCCTCTTGTCTGCATGGCAGATGGGCACAGGGTGGAATGCTGGTGGAGCTCTTaGTGGGCGTGCCTGCATCAC +
Preference number: 4 (lower is better)
Translates to: MRTGHRPLVCMADGHRVECWWSS*WACLHH
Trigger: GTGATGCAGGCACGCCCACCAAGAGCTCCACCAGCA...TTCCACCCTGTGCCCATCTGCCATGCAGACAAGAGGGCGGTGGCCTGTCCGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp TCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGCGGGGCCTGGTCAGTaGCCGACACATTCATCATGT +
Preference number: 4 (lower is better)
Translates to: SEQLMRAARAKPRLSPRPAGPGQ*PTHSSC
Trigger: ACATGATGAATGTGTCGGCCACTGACCAGGCCCCGC...AGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTTCAGTGGCTCTCACCTaGACCACAGCAGTACCTCCA +
Preference number: 4 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPSVALT*TTAVPP
Trigger: TGGAGGTACTGCTGTGGTCCAGGTGAGAGCCACTGA...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTCATTCTCATCCACAATaGTCACGTACACGTGCGTGG +
Preference number: 4 (lower is better)
Translates to: WTGVGCPASRGCPRWASLHSHPQ*SRTRAW
Trigger: CCACGCACGTGTACGTGACCATTGTGGATGAGAATG...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GGATCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGACTCTGGGCCCCGGCTaGCCCTCAGTGACTTCAAAT +
Preference number: 4 (lower is better)
Translates to: GSEQLMRAARAKPRLSPRTLGPG*PSVTSN
Trigger: ATTTGAAGTCACTGAGGGCCAGCCGGGGCCCAGAGT...CCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp TGGACGTCCAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGGGAAGGTCCACACTCTaGGCCCCGGCTGGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: WTSSREGCGGNVARLGLEGRSTL*APAGPQ
Trigger: CTGAGGGCCAGCCGGGGCCCAGAGTGTGGACCTTCC...CTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTGGACGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp TTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGCTCCAGGATGGGTaGCGAGAATGCCTCCCGGTC +
Preference number: 4 (lower is better)
Translates to: FGLFQLSLSQAGPQTLGPQLQDG*RECLPV
Trigger: GACCGGGAGGCATTCTCGCCACCCATCCTGGAGCTG...GGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp CCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGGATCAGTGTCGTCCTTaGCCACAATGCCGACAATGT +
Preference number: 4 (lower is better)
Translates to: PPLRLLSRRGWCLRGGAGDQCRP*PQCRQC
Trigger: ACATTGTCGGCATTGTGGCCAAGGACGACACTGATC...CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp TTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGGGAGAGTCAGCTTGGCATTTaGCACACTGACAGAGCGCTC +
Preference number: 4 (lower is better)
Translates to: LRLLSRRGWCLRGGAGRESQLGI*HTDRAL
Trigger: GAGCGCTCTGTCAGTGTGCCAAATGCCAAGCTGACT...CTCCCTCCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTTTTCGCGACGGTTGCTaGCTACATCCCCAGGGTTGT +
Preference number: 4 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLFRDGC*LHPQGC
Trigger: ACAACCCTGGGGATGTAGCCAGCAACCGTCGCGAAA...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGGGCTTGGAGAACTGTaGCCGGCAGTCATTGACATC +
Preference number: 4 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPGLGEL*PAVIDI
Trigger: GATGTCAATGACTGCCGGCCACAGTTCTCCAAGCCC...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTACGCTTGTGCTGAACTaGGGCTTGGAGAACTGTGGC +
Preference number: 4 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPTLVLN*GLENCG
Trigger: GCCACAGTTCTCCAAGCCCCAGTTCAGCACAAGCGT...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTACGCTTGTGCTGAACTaGGGCTTGGAGAACTGTGGC +
Preference number: 4 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLTLVLN*GLENCG
Trigger: GCCACAGTTCTCCAAGCCCCAGTTCAGCACAAGCGT...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CCTCCTCCTCCTCCTCCTCCTCCTCTTCCTACTCTCGCTCCCTGTCCCCCAGGCACGCTTGTGCTGAACTaGGGCTTGGAGAACTGTGGC +
Preference number: 4 (lower is better)
Translates to: PPPPPPPPLPTLAPCPPGTLVLN*GLENCG
Trigger: GCCACAGTTCTCCAAGCCCCAGTTCAGCACAAGCGT...GCCTGGGGGACAGGGAGCGAGAGTAGGAAGAGGAGGAGGAGGAGGAGGAGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGGTCAACTCTCCATTaGGACCTTCATCCTGGTCAG +
Preference number: 4 (lower is better)
Translates to: PPLRLLSRRGWCLRGGAGRSTLH*DLHPGQ
Trigger: CTGACCAGGATGAAGGTCCCAATGGAGAGTTGACCT...CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp GCCTTGGTGAAGCGTGGTGGCTGGTCGTTGATGTCCTCTAGCACAACGCGCACCGCAGTGGCCGCTGTGTaGTCACCAAGCCCGAGTCCA +
Preference number: 4 (lower is better)
Translates to: ALVKRGGWSLMSSSTTRTAVAAV*SPSPSP
Trigger: TGGACTCGGGCTTGGTGACCACACAGCGGCCACTGC...GGTGCGCGTTGTGCTAGAGGACATCAACGACCAGCCACCACGCTTCACCAAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCATCTCCTCTCTGATGTaGAGGATGGTGCCGTTGGGT +
Preference number: 4 (lower is better)
Translates to: EQLMRAARAKPRLSPRPGISSLM*RMVPLG
Trigger: ACCCAACGGCACCATCCTCCACATCAGAGAGGAGAT...GCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTAGACCTCGTACACGTTaGAGCGCAGCGGGATCTCCT +
Preference number: 4 (lower is better)
Translates to: SEQLMRAARAKPRLSPRPRPRTR*SAAGSP
Trigger: AGGAGATCCCGCTGCGCTCCAACGTGTACGAGGTCT...AGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTCCTCATCCTTGTCCGTaGCGTAGACCTCGTACACGT +
Preference number: 4 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLPHPCP*RRPRTR
Trigger: ACGTGTACGAGGTCTACGCCACGGACAAGGATGAGG...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GGATCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCTGCATAGTCTCGTATaGCACTGGCTGGCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: GSEQLMRAARAKPRLSPRLHSLV*HWLAQV
Trigger: GACCTGGGCCAGCCAGTGCCATACGAGACTATGCAG...CCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CCTGGATCAACTCTGAGCCCACCTTGGCGTCGGTGGCCACCCCTGCAGTGTACTGTCAGCAGCTGGTACTaGGGGCTGCCTTTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: PGSTLSPPWRRWPPLQCTVSSWY*GLPFGG
Trigger: GCCTCCAAAAGGCAGCCCCCAGTACCAGCTGCTGAC...AGTACACTGCAGGGGTGGCCACCGACGCCAAGGTGGGCTCAGAGTTGATCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TGCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCAGTACACGATCGCGTTaGGGCCCTCATCTGCATCCA +
Preference number: 4 (lower is better)
Translates to: CGVELGGRRACLASFSSASTRSR*GPHLHP
Trigger: TGGATGCAGATGAGGGCCCCAACGCGATCGTGTACT...GGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TGCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCGTGAAGCGTGGTGGCTaGTCGTTGATGTCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: CGVELGGRRACLASFSSAVKRGG*SLMSSS
Trigger: GCTAGAGGACATCAACGACCAGCCACCACGCTTCAC...GGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTAGCCTTGGTGAAGCGTaGTGGCTGGTCGTTGATGTC +
Preference number: 4 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLSLGEA*WLVVDV
Trigger: GACATCAACGACCAGCCACCACGCTTCACCAAGGCT...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGCATCTTCAGAGTCGTTaGCAAGGGCCCGGAAGTAGT +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRHLQSR*QGPGSS
Trigger: ACTACTTCCGGGCCCTTGCCAACGACTCTGAAGATG...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTCCCATGGTGAAGACCTaGCCCACATCTTCAGAGTCG +
Preference number: 4 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLPMVKT*PTSSES
Trigger: CGACTCTGAAGATGTGGGCCAGGTCTTCACCATGGG...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGATGTTGGAGAGCAGGTaGATGAACTCCTCCTCGAAG +
Preference number: 4 (lower is better)
Translates to: PPLRLLSRRGWCLRGGAGMLESR*MNSSSK
Trigger: CTTCGAGGAGGAGTTCATCCACCTGCTCTCCAACAT...CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGTCGCGGTTCACCACGTaGATAAGCAGTTCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRSRFTT*ISSSVC
Trigger: GCAGACAGAACTGCTTATCCACGTGGTGAACCGCGA...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GCGCCTGTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGTGCTCAGGCACTGTCTCGCGGTTCACCACGTaGATAAGCAGTTCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: APVTLPTRVPRGECSGTVSRFTT*ISSSVC
Trigger: GCAGACAGAACTGCTTATCCACGTGGTGAACCGCGA...GACAGTGCCTGAGCACTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TCATCTGCATCCACTGCGCCTGTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGCGTCCAGGATGCGGTTaGTATCGCGGTTCACCACGT +
Preference number: 4 (lower is better)
Translates to: SSASTAPVTLPTRVPRGERPGCG*YRGSPR
Trigger: ACGTGGTGAACCGCGATACCAACCGCATCCTGGACG...CTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCAGATGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACCCAGCCACACAGGGTTaGCTCCATCAAAGGAGTACT +
Preference number: 4 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHPATQG*LHQRST
Trigger: AGTACTCCTTTGATGGAGCCAACCCTGTGTGGCTGG...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CCGGTTGGCAATGACCTTCCCTGCCGAGGAGTCCTCCAGCTGGACATACCCTGGCGCCCAAAAGTTCCATaGGTGCGCGTGGGGCTGTTC +
Preference number: 4 (lower is better)
Translates to: PVGNDLPCRGVLQLDIPWRPKVP*VRVGLF
Trigger: GAACAGCCCCACGCGCACCCATGGAACTTTTGGGCG...CCAGGGTATGTCCAGCTGGAGGACTCCTCGGCAGGGAAGGTCATTGCCAACCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTAGGCTTGACAGCTGCTaGCTCACGCCCAAAAGTTCC +
Preference number: 4 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPRLDSC*LTPKSS
Trigger: GGAACTTTTGGGCGTGAGCCAGCAGCTGTCAAGCCT...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TGGTCGTTGATGTCCTCTAGCACAACGCGCACCTCCTGCAGTGTGAGGTCAGCACCCTGCCCTGGGCTGTaGTCTCCTGGCTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: WSLMSSSTTRTSCSVRSAPCPGL*SPGSSS
Trigger: GGACGAGGAGCCAGGAGACCACAGCCCAGGGCAGGG...TGCTGACCTCACACTGCAGGAGGTGCGCGTTGTGCTAGAGGACATCAACGACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCCCCTTGAGCTCCACTaGTGGCTTGTGGCGGAAGCG +
Preference number: 4 (lower is better)
Translates to: FGLFQLSLSQAGPQTLGPPLELH*WLVAEA
Trigger: CGCTTCCGCCACAAGCCACCAGTGGAGCTCAAGGGG...GGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAA
62% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GGTCCAGGTCCCGCAGCACCAGCAGACACCCATCGGGCTGCAGATGGAAGTTCTGCAGGGGTGTGGATTTaGCGGATTCTGTGCGGGCGT +
Preference number: 4 (lower is better)
Translates to: GPGPAAPADTHRAADGSSAGVWI*RILCGR
Trigger: ACGCCCGCACAGAATCCGCCAAATCCACACCCCTGC...AGAACTTCCATCTGCAGCCCGATGGGTGTCTGCTGGTGCTGCGGGACCTGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp ATGAACTCCTCCTCGAAGCCGCGCACACGGTCGGGGATCTCGTTAATGACGATCCCTGCCCTTGCTCCCTaGGAGGGGACGGTGGATGGG +
Preference number: 4 (lower is better)
Translates to: MNSSSKPRTRSGISLMTIPALAP*EGTVDG
Trigger: CCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGG...GATCGTCATTAACGAGATCCCCGACCGTGTGCGCGGCTTCGAGGAGGAGTTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CTGATGTGGAGGATGGTGCCGTTGGGTGGGCGCACAAAGACAGGGCGGTTGTCACAGCCTGAGCCAAGCTaGTCCCCAGACTCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: LMWRMVPLGGRTKTGRLSQPEPS*SPDSWA
Trigger: GGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTG...TGACAACCGCCCTGTCTTTGTGCGCCCACCCAACGGCACCATCCTCCACATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GGATCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGGGAGGAGGGCCTGTTTaGCCTCTTTCAGCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: GSEQLMRAARAKPRLSPRGGGPV*PLSAQP
Trigger: AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCC...CCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCTTAGCCGGAGGGGATaGTGCTTGCGGGGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: FGLFQLSLSQAGPQTLGPLSRRG*CLRGGA
Trigger: AGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAG...GGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp CAAGCCGGCCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCAATTCTCTTGGCAGCATaGGTCCTTTTTGTCTATGTC +
Preference number: 4 (lower is better)
Translates to: QAGRAGPEPPQGSRVHAPILLAA*VLFVYV
Trigger: GACATAGACAAAAAGGACCCATGCTGCCAAGAGAAT...TGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGGCCGGCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp CCTAGGTCTACCTGTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGTGGCAGCCGTCTTGGTaGCCCCTCTTCAGGGCACCC +
Preference number: 4 (lower is better)
Translates to: PRSTCRSSCFRDRCCRLQWQPSW*PLFRAP
Trigger: GGGTGCCCTGAAGAGGGGCCACCAAGACGGCTGCCA...CTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGACCTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp ATGCGGACAGGCCACCGCCCTCTTGTCTGCATGGCAGATGGGCACAGGGTGGAATCTTGGCAGCCGTCTTaGTGGCCCCTCTTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: MRTGHRPLVCMADGHRVESWQPS*WPLFRA
Trigger: TGCCCTGAAGAGGGGCCACCAAGACGGCTGCCAAGA...TTCCACCCTGTGCCCATCTGCCATGCAGACAAGAGGGCGGTGGCCTGTCCGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp GGGCATTTCCAGCAGCTGGAGGTGATGCCACCTGGACTCGGAGGAGGACAGCTCGCACTCGTGGTCATCTaGGCCTTTGGCCTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: GHFQQLEVMPPGLGGGQLALVVI*AFGLRL
Trigger: GAGCCTCAGGCCAAAGGCCCAGATGACCACGAGTGC...GAGCTGTCCTCCTCCGAGTCCAGGTGGCATCACCTCCAGCTGCTGGAAATGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR TCA 90 bp GCCACATTCCTCCAAGTCACTGCTCTGTCACCCAGACTTGGGGCGGGGAGTGGGCTGTGGCATTCACGATaGAGATGGGCGTCCCCACTG +
Preference number: 4 (lower is better)
Translates to: ATFLQVTALSPRLGAGSGLWHSR*RWASPL
Trigger: CAGTGGGGACGCCCATCTTCATCGTGAATGCCACAG...CCCACTCCCCGCCCCAAGTCTGGGTGACAGAGCAGTGACTTGGAGGAATGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR TCA 90 bp CCCAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCGCTCCCGGATCACTGTaGCGATACCGCGGGCGCTGT +
Preference number: 4 (lower is better)
Translates to: PSLSSSWDYRYLTPHLAIAPGSL*RYRGRC
Trigger: ACAGCGCCCGCGGTATCGTCACAGTGATCCGGGAGC...GATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp CCCTCGCCTTTCTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGTGTCCACCACCTGGATaGAGAGTGGAAGGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: PSPFSQLPSLPGPLQRQLCPPPG*RVEGQS
Trigger: GCTTTGCCCTTCCACTCTTCATCCAGGTGGTGGACA...CAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAGAAAGGCGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp GGATCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCGTTCTCGTACAGGCTaGTGTTGTACAGTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: GSEQLMRAARAKPRLSPRRSRTG*CCTVAG
Trigger: GCCAGCCACTGTACAACATCAGCCTGTACGAGAACG...CCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp GAGGTCCCCAGGGAGCCAGTCCAGAGTGATCCAGCTGCAAAGCCCTTGGGAAGACCGTGGCTCCTGCCATaGTGTTCTCCACCACGGAGA +
Preference number: 4 (lower is better)
Translates to: EVPREPVQSDPAAKPLGRPWLLP*CSPPRR
Trigger: TCTCCGTGGTGGAGAACATCATGGCAGGAGCCACGG...TCTTCCCAAGGGCTTTGCAGCTGGATCACTCTGGACTGGCTCCCTGGGGACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR TCA 90 bp GATGCTCCCCGTCCCTGCAACCAACAGGTTCAGGAGGTCCCCAGGGAGCCAGTCTGCCCGTGGTGCTGTTaGGGCTGTAGAACTTGTTGG +
Preference number: 4 (lower is better)
Translates to: DAPRPCNQQVQEVPREPVCPWCC*GCRTCW
Trigger: CCAACAAGTTCTACAGCCTCAACAGCACCACGGGCA...GACTGGCTCCCTGGGGACCTCCTGAACCTGTTGGTTGCAGGGACGGGGAGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR TCA 90 bp GGGCACAGGGTGGAACAGGAAGAGGGCCTGAGCTTGGGCCCAGCTCCATCACTGTGCCCGTGGTGCTGTTaGGGCTGTAGAACTTGTTGG +
Preference number: 4 (lower is better)
Translates to: GHRVEQEEGLSLGPAPSLCPWCC*GCRTCW
Trigger: CCAACAAGTTCTACAGCCTCAACAGCACCACGGGCA...CAGTGATGGAGCTGGGCCCAAGCTCAGGCCCTCTTCCTGTTCCACCCTGTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGTTGGACCACGATGACTaGCGTTCCAATGCCTGCGGT +
Preference number: 4 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQLDHDD*RSNACG
Trigger: ACCGCAGGCATTGGAACGTCAGTCATCGTGGTCCAA...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp GGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTCCGGCCAGCGAGGGTCTCCATCCATaGTGCTGTACTCCACCTGCC +
Preference number: 4 (lower is better)
Translates to: GMWRKCSETWTGVGCPASEGLHP*CCTPPA
Trigger: GGCAGGTGGAGTACAGCATCATGGATGGAGACCCTC...GCTGGCCGGACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp TTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGGGAGCAATCACTGAGAGAGTaGCCTCATAGGTGGCAACCA +
Preference number: 4 (lower is better)
Translates to: LRLLSRRGWCLRGGAGREQSLRE*PHRWQP
Trigger: TGGTTGCCACCTATGAGGTCACTCTCTCAGTGATTG...CTCCCTCCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp GCCGATGATGGCCGTGTCGTTGTGGCCTGCCAGGTCTCGGGCCACAATGTCCACTGGCATTTGGCACACTaGCAGAGCGCTCTGGTAGGT +
Preference number: 4 (lower is better)
Translates to: ADDGRVVVACQVSGHNVHWHLAH*QSALVG
Trigger: ACCTACCAGAGCGCTCTGTCAGTGTGCCAAATGCCA...GTGGACATTGTGGCCCGAGACCTGGCAGGCCACAACGACACGGCCATCATCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CGTTGGGGCCCTCATCTGCATCCACTGCGCCTGTCACGTTGCCCACGAGGGTGCGAGTGCAAAGTTGCCTaGGTCAGCATCAGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: RWGPHLHPLRLSRCPRGCECKVA*VSISGS
Trigger: ACTGCCACTGATGCTGACTCAGGCAACTTTGCACTC...GCACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCAGATGAGGGCCCCAACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CATCCAGGGCCAGCACCTGGATCAACTCTGAGCCCACCTTGGCGTCGGTGGCCAGTGGCCGGCAGTCATTaGCATCCAGCACTTGGATCA +
Preference number: 4 (lower is better)
Translates to: HPGPAPGSTLSPPWRRWPVAGSH*HPALGS
Trigger: TGATCCAAGTGCTGGATGTCAATGACTGCCGGCCAC...TGGCCACCGACGCCAAGGTGGGCTCAGAGTTGATCCAGGTGCTGGCCCTGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp ACAGATCCCTGGGCCGCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTACTCTCGCGCCAGGGCCCTCAAGTaGGTAGGTCAACTCTCCATT +
Preference number: 4 (lower is better)
Translates to: TDPWAASSSSSSSSSYSRARALK*VGQLSI
Trigger: AATGGAGAGTTGACCTACTCACTTGAGGGCCCTGGC...GCGAGAGTAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGCGGCCCAGGGATCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGTGTAGTACCAGTTCATaGGGACAAAGAGCATGGCGG +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRCSTSS*GQRAWR
Trigger: CCGCCATGCTCTTTGTCCTCATGAACTGGTACTACA...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp TTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCGGCAAAAGTGGGATCTaGGCAGCTGATGCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: FGLFQLSLSQAGPQTLGPGKSGI*AADAGC
Trigger: GCAGCCCGCATCAGCTGCTCAGATCCCACTTTTGCC...GGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CTCGTAGTCCACTGTCCGGTTGGCAATGACCTTCCCTGCCGAGGAGTCCTCCAGGGCAAAAGTGGGATCTaGGCAGCTGATGCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LVVHCPVGNDLPCRGVLQGKSGI*AADAGC
Trigger: GCAGCCCGCATCAGCTGCTCAGATCCCACTTTTGCC...CTGGAGGACTCCTCGGCAGGGAAGGTCATTGCCAACCGGACAGTGGACTACGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTAGGTCAGATGCTGAATaGGCGTCTGGCAAAAGTGGG +
Preference number: 4 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPRSDAE*ASGKSG
Trigger: CCCACTTTTGCCAGACGCTCATTCAGCATCTGACCT...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACGTAGAGGTCAGATGCTaGATGAGCGTCTGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHVEVRC*MSVWQK
Trigger: CTTTTGCCAGACGCTCATTCAGCATCTGACCTCTAC...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CCCTCGCCTTTCTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGCAAGTCCTCACAAGCTaGGGCCCTGATCGAGAGAAC +
Preference number: 4 (lower is better)
Translates to: PSPFSQLPSLPGPLQRQLQVLTS*GPDREN
Trigger: GTTCTCTCGATCAGGGCCTCAGCTTGTGAGGACTTG...CAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAGAAAGGCGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR TCA 90 bp CATCCACATTCCCTAGGTAAGTCTTCCCTATACCCGCTGCCCTGGGTCCAGCTGCTGTTGCAGGAGCCATaGGCACAGAGGGCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: HPHSLGKSSLYPLPWVQLLLQEP*AQRAPA
Trigger: GGCTGGGGCCCTCTGTGCTCATGGCTCCTGCAACAG...CAGCTGGACCCAGGGCAGCGGGTATAGGGAAGACTTACCTAGGGAATGTGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp CTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCCAGCTGATCTGCCTTTaGGCTTCTGTCTTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: LSAPVTPGTLAEATDPLPQLICL*ASVLLL
Trigger: CAGCAACAAGACAGAAGCTCAAAGGCAGATCAGCTG...GGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp GGTCCAGGTCCCGCAGCACCAGCAGACACCCATCGGGCTGCAGATGGAAGTTCTGGAGAGCTCAGGGGCTaGGGCTCTGGCAAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: GPGPAAPADTHRAADGSSGELRG*GSGKKK
Trigger: TTTCTTCTTGCCAGAGCCTCAGCCCCTGAGCTCTCC...AGAACTTCCATCTGCAGCCCGATGGGTGTCTGCTGGTGCTGCGGGACCTGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642965.1
CDS-3UTR GCA 90 bp AGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAGGCTCATCCGCGGCGTaGCGGCAGCTCCTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: SLSSSWDYRYLTPHLAISGSSAA*RQLLGL
Trigger: GAGACCCAGGAGCTGCCGGCACGCCGCGGATGAGCC...TGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp AGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCACCCCATGGCTCCGTGTaGGTGTGTGCAGCGGCGCCG +
Preference number: 4 (lower is better)
Translates to: SLSSSWDYRYLTPHLAISPHGSV*VCAAAP
Trigger: CGGCGCCGCTGCACACACGCACACGGAGCCATGGGG...TGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp GAGTGGGGCTCAGGGCTCCTCCCTAGGAATCATGGGGCCTTACCTCCCTCTAGAGGCAAAGCCGACCTGTaGCAGCTCAGTGATGGCCAC +
Preference number: 4 (lower is better)
Translates to: EWGSGLLPRNHGALPPSRGKADL*QLSDGH
Trigger: GTGGCCATCACTGAGCTGGCACAGGTCGGCTTTGCC...TCTAGAGGGAGGTAAGGCCCCATGATTCCTAGGGAGGAGCCCTGAGCCCCACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR GCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGTTCCCCAAAGGTGCCTaGATCATTGTCAGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRFPKGA*IIVSCQ
Trigger: CTGGCAACTGACAATGATGCAGGCACCTTTGGGGAA...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp TGGACGTCCAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGGCATGGCGTGGGTGGTaGGGATCTTGCCCGTGGTGC +
Preference number: 4 (lower is better)
Translates to: WTSSREGCGGNVARLGLEAWRGW*GSCPWC
Trigger: GCACCACGGGCAAGATCCGCACCACCCACGCCATGC...CTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTGGACGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp AGGCACCACCAGAGGCTAAAGCCCAACAGTAGAGCCCTGACCTCTTTTCCACCCGCATGGCGTGGGTGGTaGGGATCTTGCCCGTGGTGC +
Preference number: 4 (lower is better)
Translates to: RHHQRLKPNSRALTSFPPAWRGW*GSCPWC
Trigger: GCACCACGGGCAAGATCCGCACCACCCACGCCATGC...GGGTGGAAAAGAGGTCAGGGCTCTACTGTTGGGCTTTAGCCTCTGGTGGTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR GCA 90 bp CTCGGGAGGCACCACCAGAGGCTAAAGCCCAACAGTAGAGCCCTGACCTCTTTTGCATGCCCACCGGCATaGGGTAGGACACCAGGCCGT +
Preference number: 4 (lower is better)
Translates to: LGRHHQRLKPNSRALTSFACPPA*GRTPGR
Trigger: ACGGCCTGGTGTCCTACCGCATGCCGGTGGGCATGC...AAAAGAGGTCAGGGCTCTACTGTTGGGCTTTAGCCTCTGGTGGTGCCTCCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR GCA 90 bp CCCAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCGCATGCCCACCGGCATaGGGTAGGACACCAGGCCGT +
Preference number: 4 (lower is better)
Translates to: PSLSSSWDYRYLTPHLAIACPPA*GRTPGR
Trigger: ACGGCCTGGTGTCCTACCGCATGCCGGTGGGCATGC...GATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCTTCCGTGGAGGGGTaGCTCGGTCAGAAGCCACAA +
Preference number: 4 (lower is better)
Translates to: WEGGGPVWPLSAQPEPSWSSVEG*LGQKPQ
Trigger: TTGTGGCTTCTGACCGAGGCACCCCTCCACGGAAGA...CCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp GGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTCCGGCCAGCATGGTCACGTACACGTaGGTGGTGGCCGACAGGGTT +
Preference number: 4 (lower is better)
Translates to: GMWRKCSETWTGVGCPASMVTYT*VVADRV
Trigger: AACCCTGTCGGCCACCACGCACGTGTACGTGACCAT...GCTGGCCGGACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGGTAGATGTCTTGGTCTaGATCCAGGGCCAGGATGGG +
Preference number: 4 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQVDVLV*IQGQDG
Trigger: CCCATCCTGGCCCTGGATGCAGACCAAGACATCTAC...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp GAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCGTCCTTGGCCACAATaGCGACAATGTGGTACTCTA +
Preference number: 4 (lower is better)
Translates to: EQLMRAARAKPRLSPRPGRPWPQ*RQCGTL
Trigger: TAGAGTACCACATTGTCGGCATTGTGGCCAAGGACG...GCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp GTAGCTGCTCCTTGTTCTCATCGATCATCTGGATCACCCGGTCCACGTCCAGGAGACAGGGATCTCAGCTaGCCGGGGCGGGGACCCGTT +
Preference number: 4 (lower is better)
Translates to: VAAPCSHRSSGSPGPRPGDRDLS*PGRGPV
Trigger: AACGGGTCCCCGCCCCGGGCAGCTGAGATCCCTGTC...TCCTGGACGTGGACCGGGTGATCCAGATGATCGATGAGAACAAGGAGCAGCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACACTTGGATCACCACCTaGACTGAATTTTCGCGACGG +
Preference number: 4 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHTWITT*TEFSRR
Trigger: CCGTCGCGAAAATTCAGTGCAGGTGGTGATCCAAGT...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp TTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCACTCCCAGTCCCGGTTaGCCGCAGTCTTCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: FGLFQLSLSQAGPQTLGPTPSPG*PQSSGS
Trigger: GCTTCCTGAAGACTGCGGGCAACCGGGACTGGGAGT...GGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GTAGCTGCTCCTTGTTCTCATCGATCATCTGGATCACCCGGTCCACGTCCAGGACTGCGCCTGTCACGTTaGCCACGAGGGTGCCGCGTG +
Preference number: 4 (lower is better)
Translates to: VAAPCSHRSSGSPGPRPGLRLSR*PRGCRV
Trigger: CACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAG...TCCTGGACGTGGACCGGGTGATCCAGATGATCGATGAGAACAAGGAGCAGCTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGCTCATCTGCATCCACTaGGCCTGTCACGTTGCCCAC +
Preference number: 4 (lower is better)
Translates to: WEGGGPVWPLSAQPEPSWLICIH*ACHVAH
Trigger: GTGGGCAACGTGACAGGCGCAGTGGATGCAGATGAG...CCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp CCGGTTGGCAATGACCTTCCCTGCCGAGGAGTCCTCCAGCTGGACATACCCTGGCTCATCTGCATCCACTaGGCCTGTCACGTTGCCCAC +
Preference number: 4 (lower is better)
Translates to: PVGNDLPCRGVLQLDIPWLICIH*ACHVAH
Trigger: GTGGGCAACGTGACAGGCGCAGTGGATGCAGATGAG...CCAGGGTATGTCCAGCTGGAGGACTCCTCGGCAGGGAAGGTCATTGCCAACCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp TTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCGTTGGGGCCCTCATCTaGATCCACTGCGCCTGTCAC +
Preference number: 4 (lower is better)
Translates to: FGLFQLSLSQAGPQTLGPVGALI*IHCACH
Trigger: GTGACAGGCGCAGTGGATGCAGATGAGGGCCCCAAC...GGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp CTCGTAGTCCACTGTCCGGTTGGCAATGACCTTCCCTGCCGAGGAGTCCTCCAGGTCGGTGGCCACCCCTaGAGTGTACTCAGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: LVVHCPVGNDLPCRGVLQVGGHP*SVLSLG
Trigger: ACCAAGGCTGAGTACACTGCAGGGGTGGCCACCGAC...CTGGAGGACTCCTCGGCAGGGAAGGTCATTGCCAACCGGACAGTGGACTACGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GTTGTGGCCTGCCAGGTCTCGGGCCACAATGTCCACCACGAAGTAGCCGGGGCTGTTGTTGCCAATGTCTaGATCCAGGGCCAGCACCTG +
Preference number: 4 (lower is better)
Translates to: VVACQVSGHNVHHEVAGAVVANV*IQGQHL
Trigger: CAGGTGCTGGCCCTGGATGCAGACATTGGCAACAAC...AGCCCCGGCTACTTCGTGGTGGACATTGTGGCCCGAGACCTGGCAGGCCACAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp CTGATGTGGAGGATGGTGCCGTTGGGTGGGCGCACAAAGACAGGGCGGTTGTCACGTGTCGTTGTGGCCTaGCAGGTCTCGGGCCACAAT +
Preference number: 4 (lower is better)
Translates to: LMWRMVPLGGRTKTGRLSRVVVA*QVSGHN
Trigger: ATTGTGGCCCGAGACCTGGCAGGCCACAACGACACG...TGACAACCGCCCTGTCTTTGTGCGCCCACCCAACGGCACCATCCTCCACATCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp TGCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCACGATGATCGCCATCTaGAGGGCAGACATGTCATCC +
Preference number: 4 (lower is better)
Translates to: CGVELGGRRACLASFSSATMIAI*RADMSS
Trigger: GGATGACATGTCTGCCCTGCAGATGGCGATCATCGT...GGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp TGCAGTGTGAGGTCAGCAACCAGGTCGAGGGTTGGGGAGGGTCCACGGGGAGGTCAAAAGTTCCATGGGTaGGCGTGGGGCTGTTCCACA +
Preference number: 4 (lower is better)
Translates to: CSVRSATRSRVGEGPRGGQKFHG*AWGCST
Trigger: TGTGGAACAGCCCCACGCGCACCCATGGAACTTTTG...ACCTCCCCGTGGACCCTCCCCAACCCTCGACCTGGTTGCTGACCTCACACTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTATCAGGCTTGACAGCTaGTGGCTCACGCCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLIRLDS*WLTPKS
Trigger: ACTTTTGGGCGTGAGCCAGCAGCTGTCAAGCCTGAT...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTCAGGAGGAGGCTTTTTaGACCATCCGCTGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPQEEAF*TIRCAK
Trigger: CTTTGCACAGCGGATGGTGCAAAAAGCCTCCTCCTG...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000642965.1
CDS-3UTR GCA 90 bp AGCCCGCAGGTATCGGTCATCATCAGGCTTGACAGCTGCTGGCTCACGCCCAAAAAGCGCAGGCTACCCTaGCCTGGGCTGTGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: SPQVSVIIRLDSCWLTPKKRRLP*PGLWSP
Trigger: AGGAGACCACAGCCCAGGGCAGGGTAGCCTGCGCTT...TTTGGGCGTGAGCCAGCAGCTGTCAAGCCTGATGATGACCGATACCTGCGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp TGGACGTCCAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGGCAGCGTGCCCGTGCTaGCGTGCACCACATGGATCC +
Preference number: 4 (lower is better)
Translates to: WTSSREGCGGNVARLGLEAACPC*RAPHGS
Trigger: GGATCCATGTGGTGCACGGCAGCACGGGCACGCTGC...CTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTGGACGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp CAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTGCAGCGTGCCCGTGCTaGCGTGCACCACATGGATCC +
Preference number: 4 (lower is better)
Translates to: QQRGMWRKCSETWTGVGCAACPC*RAPHGS
Trigger: GGATCCATGTGGTGCACGGCAGCACGGGCACGCTGC...ACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp ATGTTGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCGCGCACACGGTCGGGGACGGTGGATGGGTGCTaGTCACACCCACAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: MLESRWMNSSSKPRTRSGTVDGC*SHPQGF
Trigger: GAAGCCTTGTGGGTGTGAGCAGCACCCATCCACCGT...CCCCGACCGTGTGCGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GGCCACAATGTCCACCACGAAGTAGCCGGGGCTGTAGGCCATGAAGAGGTCGAAGCAGCTGATGCGGGCTaGCAGGGCCAAGCCAAGGTT +
Preference number: 4 (lower is better)
Translates to: GHNVHHEVAGAVGHEEVEAADAG*QGQAKV
Trigger: AACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGC...TTCGACCTCTTCATGGCCTACAGCCCCGGCTACTTCGTGGTGGACATTGTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGATCTGAGCAGCTGATGCGGAGCCGGAGGGGATGGTaGTTGCGGGGTGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: GQMLNERLAKVGSEQLMRSRRGW*LRGGAG
Trigger: CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCT...CCGCATCAGCTGCTCAGATCCCACTTTTGCCAGACGCTCATTCAGCATCTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp TGGACGTCCAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGGGCCTCCCTTGCGCCTaGTTAGCCGGAGGGGATGGT +
Preference number: 4 (lower is better)
Translates to: WTSSREGCGGNVARLGLEGLPCA*LAGGDG
Trigger: ACCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCC...CTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTGGACGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp TTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCTTGTCCACGTGGGGATaGCACCTCCACCTGGACGTC +
Preference number: 4 (lower is better)
Translates to: FGLFQLSLSQAGPQTLGPLSTWG*HLHLDV
Trigger: GACGTCCAGGTGGAGGTGGCATCCCCACGTGGACAA...GGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp GGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTCCGGCCAGCTGGGGAGAGGGCGGCTaGATTCAGTCTGCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: GMWRKCSETWTGVGCPASWGEGG*IQSAKA
Trigger: AGCCTTTGCAGACTGAATGCAGCCGCCCTCTCCCCA...GCTGGCCGGACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp GTTGGCAATGACCTTCCCTGCCGAGGAGTCCTCCAGCTGGACATACCCTGGGGGTGGGGAGAGGGCGGCTaGATTCAGTCTGCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: VGNDLPCRGVLQLDIPWGWGEGG*IQSAKA
Trigger: AGCCTTTGCAGACTGAATGCAGCCGCCCTCTCCCCA...CCCCCAGGGTATGTCCAGCTGGAGGACTCCTCGGCAGGGAAGGTCATTGCCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp TCTACCTGTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAAGACGGTGCTGCCAGCATCTaGCTGGTGCCCTGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: STCRSSCFRDRCCRLQEDGAASI*LVPCGS
Trigger: GCTCCCACAGGGCACCAGGCAGATGCTGGCAGCACC...GTCTTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp AAAAACATGGCAAGGACCCAACTAAACACACCCGTGGGCCCCCAGTTTGCAGCTTCCCTCGACAGCCCCTaGCGGGCCCCGAGGACAACC +
Preference number: 4 (lower is better)
Translates to: KNMARTQLNTPVGPQFAASLDSP*RAPRTT
Trigger: GGTTGTCCTCGGGGCCCGGCAGGGGCTGTCGAGGGA...AGCTGCAAACTGGGGGCCCACGGGTGTGTTTAGTTGGGTCCTTGCCATGTTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp TCTACCTGTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAAGACCCTTGCGCCTCTCCCTaGACAGCTTCCGCCATGGCC +
Preference number: 4 (lower is better)
Translates to: STCRSSCFRDRCCRLQEDPCASP*TASAMA
Trigger: GGCCATGGCGGAAGCTGTGCAGGGAGAGGCGCAAGG...GTCTTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp GGGAGTGGGGCTCAGGGCTCCTCCCTAGGAATCATGGGGCCTTACCTCCCTCTAAAAAGCCAGGCCACGTaGCAGCTGGTGGCAACATGG +
Preference number: 4 (lower is better)
Translates to: GSGAQGSSLGIMGPYLPLKSQAT*QLVATW
Trigger: CCATGTTGCCACCAGCTGCCACGTGGCCTGGCTTTT...TAGAGGGAGGTAAGGCCCCATGATTCCTAGGGAGGAGCCCTGAGCCCCACTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp AGGATGAGGCCACATTCCTCCAAGTCACTGCTCTGTCACCCAGACTTGGGGCGGGGTCTCTCTGTCCAGTaGCTGCCGGAGCCACACCAC +
Preference number: 4 (lower is better)
Translates to: RMRPHSSKSLLCHPDLGRGLSVQ*LPEPHH
Trigger: GTGGTGTGGCTCCGGCAGCCACTGGACAGAGAGACC...CCGCCCCAAGTCTGGGTGACAGAGCAGTGACTTGGAGGAATGTGGCCTCATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp GCCACATTCCTCCAAGTCACTGCTCTGTCACCCAGACTTGGGGCGGGGAGTGGGGTGATCACCCCCTGGTaGTCGCTGACAGAGAACTCC +
Preference number: 4 (lower is better)
Translates to: ATFLQVTALSPRLGAGSGVITPW*SLTENS
Trigger: GGAGTTCTCTGTCAGCGACCACCAGGGGGTGATCAC...CCCACTCCCCGCCCCAAGTCTGGGTGACAGAGCAGTGACTTGGAGGAATGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp GGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTCCGGCCAGCGGTCTCGTAGTCCAGTaGGATGGCCACCCGAATACG +
Preference number: 4 (lower is better)
Translates to: GMWRKCSETWTGVGCPASGLVVQ*DGHPNT
Trigger: CGTATTCGGGTGGCCATCCCACTGGACTACGAGACC...GCTGGCCGGACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GGGAGTGGGGCTCAGGGCTCCTCCCTAGGAATCATGGGGCCTTACCTCCCTCTAGGTCTCGTAGTCCAGTaGGATGGCCACCCGAATACG +
Preference number: 4 (lower is better)
Translates to: GSGAQGSSLGIMGPYLPLGLVVQ*DGHPNT
Trigger: CGTATTCGGGTGGCCATCCCACTGGACTACGAGACC...TAGAGGGAGGTAAGGCCCCATGATTCCTAGGGAGGAGCCCTGAGCCCCACTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp ATGCGGACAGGCCACCGCCCTCTTGTCTGCATGGCAGATGGGCACAGGGTGGAAAGCGGTCCAGGTCTGTaGCATTCAGGAACAGCACCG +
Preference number: 4 (lower is better)
Translates to: MRTGHRPLVCMADGHRVESGPGL*HSGTAP
Trigger: CGGTGCTGTTCCTGAATGCCACAGACCTGGACCGCT...TTCCACCCTGTGCCCATCTGCCATGCAGACAAGAGGGCGGTGGCCTGTCCGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp GAGTGGGGCTCAGGGCTCCTCCCTAGGAATCATGGGGCCTTACCTCCCTCTAGAGCGATGCCAGTTTTCTaGTTGTGGCCCACACCCCCG +
Preference number: 4 (lower is better)
Translates to: EWGSGLLPRNHGALPPSRAMPVF*LWPTPP
Trigger: CGGGGGTGTGGGCCACAACCAGAAAACTGGCATCGC...TCTAGAGGGAGGTAAGGCCCCATGATTCCTAGGGAGGAGCCCTGAGCCCCACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGGGTCACATCAGAGTCTaGAGGGGTCATCTCCACCAG +
Preference number: 4 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQGHIRV*RGHLHQ
Trigger: CTGGTGGAGATGACCCCTCCAGACTCTGATGTGACC...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp CCCTCGCCTTTCTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGCAACAGCCACCACCGTaGTCACATCAGAGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: PSPFSQLPSLPGPLQRQLQQPPP*SHQSLE
Trigger: CTCCAGACTCTGATGTGACCACGGTGGTGGCTGTTG...CAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAGAAAGGCGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp TGGACGTCCAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGCGGTCCAGCATGGCGTaGGTGGTGCGGATCTTGCCC +
Preference number: 4 (lower is better)
Translates to: WTSSREGCGGNVARLGLERSSMA*VVRILP
Trigger: GGGCAAGATCCGCACCACCCACGCCATGCTGGACCG...CTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTGGACGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp CCCAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCATCAGCTCGGCCTCATaGGGGTCGGGGTTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: PSLSSSWDYRYLTPHLAIISSAS*GSGFSR
Trigger: CCGGGAGAACCCCGACCCCCATGAGGCCGAGCTGAT...GATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp GTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAAGACAGTGGCCACACTGTGGCACTGCTaGTGGCTTTCAGAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: VDPPASETGAAGCRKTVATLWHC*WLSEGA
Trigger: GGCCCCCTCTGAAAGCCACCAGCAGTGCCACAGTGT...GGCCACTGTCTTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp GATGAGGCCACATTCCTCCAAGTCACTGCTCTGTCACCCAGACTTGGGGCGGGGTGCTGGTGGAGCTCTTaGTGGGCGTGCCTGCATCAC +
Preference number: 4 (lower is better)
Translates to: DEATFLQVTALSPRLGAGCWWSS*WACLHH
Trigger: GTGATGCAGGCACGCCCACCAAGAGCTCCACCAGCA...CCCCGCCCCAAGTCTGGGTGACAGAGCAGTGACTTGGAGGAATGTGGCCTCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp AGGATGAGGCCACATTCCTCCAAGTCACTGCTCTGTCACCCAGACTTGGGGCGGCACCCGGAACTCGCGTaGCACGTCCTCGGACACAGA +
Preference number: 4 (lower is better)
Translates to: RMRPHSSKSLLCHPDLGRHPELA*HVLGHR
Trigger: TCTGTGTCCGAGGACGTGCCACGCGAGTTCCGGGTG...CCGCCCCAAGTCTGGGTGACAGAGCAGTGACTTGGAGGAATGTGGCCTCATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTCGGAAGTTGTTGCCATaGTTACCATGGAGGATGCGG +
Preference number: 4 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLRKLLP*LPWRMR
Trigger: CCGCATCCTCCATGGTAACCATGGCAACAACTTCCG...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp TCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTCAGTTCTCTAGCAGATaGACAGTGAGGGTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SEQLMRAARAKPRLSPRPQFSSR*TVRVAG
Trigger: CCCTGCCACCCTCACTGTCCATCTGCTAGAGAACTG...AGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGATCTGAGCAGCTGATGCGGCGGTGCCCCGGTCGGTaGCCACCACCGTTAGCCTGT +
Preference number: 4 (lower is better)
Translates to: GQMLNERLAKVGSEQLMRRCPGR*PPPLAC
Trigger: ACAGGCTAACGGTGGTGGCCACCGACCGGGGCACCG...CCGCATCAGCTGCTCAGATCCCACTTTTGCCAGACGCTCATTCAGCATCTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GGATCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGAGCACGCTCACTGTCTaGATGGGGTTGAGGAACTCG +
Preference number: 4 (lower is better)
Translates to: GSEQLMRAARAKPRLSPRSTLTV*MGLRNS
Trigger: CGAGTTCCTCAACCCCATCCAGACAGTGAGCGTGCT...CCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGTGCTCAGGCACTGTCAGCAGCAGTCAGCTTGGCATTTaGCACACTGACAGAGCGCTC +
Preference number: 4 (lower is better)
Translates to: VTLPTRVPRGECSGTVSSSQLGI*HTDRAL
Trigger: GAGCGCTCTGTCAGTGTGCCAAATGCCAAGCTGACT...GCTGCTGACAGTGCCTGAGCACTCACCACGCGGCACCCTCGTGGGCAACGTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGATCTGAGCAGCTGATGCGGGTGTGGTCCCAGGGGTaGCCCCCTCCAGGATCCGCT +
Preference number: 4 (lower is better)
Translates to: GQMLNERLAKVGSEQLMRVWSQG*PPPGSA
Trigger: AGCGGATCCTGGAGGGGGCCACCCCTGGGACCACAC...CCGCATCAGCTGCTCAGATCCCACTTTTGCCAGACGCTCATTCAGCATCTGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GTAGGCCATGAAGAGGTCGAAGGTGCGCAGAATGCCGTCCATGCTCCCCATGGTCAGCTGGACATACCCTaGGGGCACCAGGTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: VGHEEVEGAQNAVHAPHGQLDIP*GHQVQQ
Trigger: CTGCTGGACCTGGTGCCCCCAGGGTATGTCCAGCTG...ACCATGGGGAGCATGGACGGCATTCTGCGCACCTTCGACCTCTTCATGGCCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GGATCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGTTTCGCGACGGTTGCTaGCTACATCCCCAGGGTTGT +
Preference number: 4 (lower is better)
Translates to: GSEQLMRAARAKPRLSPRFRDGC*LHPQGC
Trigger: ACAACCCTGGGGATGTAGCCAGCAACCGTCGCGAAA...CCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGACGCTTGTGCTGAACTaGGGCTTGGAGAACTGTGGC +
Preference number: 4 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQTLVLN*GLENCG
Trigger: GCCACAGTTCTCCAAGCCCCAGTTCAGCACAAGCGT...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GTTGGCAATGACCTTCCCTGCCGAGGAGTCCTCCAGCTGGACATACCCTGGGGGAGACCTCGTACACGTTaGAGCGCAGCGGGATCTCCT +
Preference number: 4 (lower is better)
Translates to: VGNDLPCRGVLQLDIPWGRPRTR*SAAGSP
Trigger: AGGAGATCCCGCTGCGCTCCAACGTGTACGAGGTCT...CCCCCAGGGTATGTCCAGCTGGAGGACTCCTCGGCAGGGAAGGTCATTGCCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGCCTCATCCTTGTCCGTaGCGTAGACCTCGTACACGT +
Preference number: 4 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQPHPCP*RRPRTR
Trigger: ACGTGTACGAGGTCTACGCCACGGACAAGGATGAGG...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACGATGAGGCCGCTGATTaGGTCGATGATGAAGAACTC +
Preference number: 4 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHDEAAD*VDDEEL
Trigger: GAGTTCTTCATCATCGACCCAATCAGCGGCCTCATC...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGATGAGGCCGCTGATTaGGTCGATGATGAAGAACTC +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRDEAAD*VDDEEL
Trigger: GAGTTCTTCATCATCGACCCAATCAGCGGCCTCATC...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TGGACGTCCAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGTATGGCACTGGCTaGCCCAGGTCGCTGGCCACC +
Preference number: 4 (lower is better)
Translates to: WTSSREGCGGNVARLGLESYGTG*PRSLAT
Trigger: GGTGGCCAGCGACCTGGGCCAGCCAGTGCCATACGA...CTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTGGACGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp GGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTCCGGCCAGCCTGCATAGTCTCGTATaGCACTGGCTGGCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: GMWRKCSETWTGVGCPASLHSLV*HWLAQV
Trigger: GACCTGGGCCAGCCAGTGCCATACGAGACTATGCAG...GCTGGCCGGACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp GCCGATGATGGCCGTGTCGTTGTGGCCTGCCAGGTCTCGGGCCACAATGTCCACAGTACACGATCGCGTTaGGGCCCTCATCTGCATCCA +
Preference number: 4 (lower is better)
Translates to: ADDGRVVVACQVSGHNVHSTRSR*GPHLHP
Trigger: TGGATGCAGATGAGGGCCCCAACGCGATCGTGTACT...GTGGACATTGTGGCCCGAGACCTGGCAGGCCACAACGACACGGCCATCATCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GCCGATGATGGCCGTGTCGTTGTGGCCTGCCAGGTCTCGGGCCACAATGTCCACAGCCTTGGTGAAGCGTaGTGGCTGGTCGTTGATGTC +
Preference number: 4 (lower is better)
Translates to: ADDGRVVVACQVSGHNVHSLGEA*WLVVDV
Trigger: GACATCAACGACCAGCCACCACGCTTCACCAAGGCT...GTGGACATTGTGGCCCGAGACCTGGCAGGCCACAACGACACGGCCATCATCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TGCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCCATCTTCAGAGTCGTTaGCAAGGGCCCGGAAGTAGT +
Preference number: 4 (lower is better)
Translates to: CGVELGGRRACLASFSSAHLQSR*QGPGSS
Trigger: ACTACTTCCGGGCCCTTGCCAACGACTCTGAAGATG...GGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GCCGATGATGGCCGTGTCGTTGTGGCCTGCCAGGTCTCGGGCCACAATGTCCACCCCATGGTGAAGACCTaGCCCACATCTTCAGAGTCG +
Preference number: 4 (lower is better)
Translates to: ADDGRVVVACQVSGHNVHPMVKT*PTSSES
Trigger: CGACTCTGAAGATGTGGGCCAGGTCTTCACCATGGG...GTGGACATTGTGGCCCGAGACCTGGCAGGCCACAACGACACGGCCATCATCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTATGGCCGTGTCGTTGTaGCCTGCCAGGTCTCGGGCC +
Preference number: 4 (lower is better)
Translates to: QQRGMWRKCSETWTGVGCMAVSL*PARSRA
Trigger: GGCCCGAGACCTGGCAGGCCACAACGACACGGCCAT...ACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGCCCTTCTTGTCCACATaGAACTGCACATTGTCAGTA +
Preference number: 4 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWPFLST*NCTLSV
Trigger: TACTGACAATGTGCAGTTCCATGTGGACAAGAAGGG...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTTCGCGGTTCACCACGTaGATAAGCAGTTCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPSRFTT*ISSSVC
Trigger: GCAGACAGAACTGCTTATCCACGTGGTGAACCGCGA...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CCTCCTCCTCCTCCTCCTCCTCCTCTTCCTACTCTCGCTCCCTGTCCCCCAGGCTTCTCATCGATCATCTaGATCACCCGGTCCACGTCC +
Preference number: 4 (lower is better)
Translates to: PPPPPPPPLPTLAPCPPGFSSII*ITRSTS
Trigger: GGACGTGGACCGGGTGATCCAGATGATCGATGAGAA...GCCTGGGGGACAGGGAGCGAGAGTAGGAAGAGGAGGAGGAGGAGGAGGAGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TGCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCCCAGCCACACAGGGTTaGCTCCATCAAAGGAGTACT +
Preference number: 4 (lower is better)
Translates to: CGVELGGRRACLASFSSAPATQG*LHQRST
Trigger: AGTACTCCTTTGATGGAGCCAACCCTGTGTGGCTGG...GGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GGATCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGAGGCTTGACAGCTGCTaGCTCACGCCCAAAAGTTCC +
Preference number: 4 (lower is better)
Translates to: GSEQLMRAARAKPRLSPRRLDSC*LTPKSS
Trigger: GGAACTTTTGGGCGTGAGCCAGCAGCTGTCAAGCCT...CCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGGGAGATGTTGTCATACTCCTaGATGGCAGCCCGCAGGTAT +
Preference number: 4 (lower is better)
Translates to: LRLLSRRGWCLRGGAGREMLSYS*MAARRY
Trigger: ATACCTGCGGGCTGCCATCCAGGAGTATGACAACAT...CTCCCTCCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGATGTTGTCATACTCCTaGATGGCAGCCCGCAGGTAT +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRMLSYS*MAARRY
Trigger: ATACCTGCGGGCTGCCATCCAGGAGTATGACAACAT...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TGCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCCCCTCACGAATGATCTaGCCCAGCTTGGCAATGTTG +
Preference number: 4 (lower is better)
Translates to: CGVELGGRRACLASFSSAPSRMI*PSLAML
Trigger: CAACATTGCCAAGCTGGGCCAGATCATTCGTGAGGG...GGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGGTATCAGCTCAGAGATaGAGGAGTGGCAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQVSAQR*RSGRRR
Trigger: CCTCCTCCTGCCACTCCTCCATCTCTGAGCTGATAC...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000642965.1
CDS-3UTR CCA 90 bp GGGGTGTGGATTTGGCGGATTCTGTGCGGGCGTTGCGCTCGAAGGCAGTGGCCTGTATCAGCTCAGAGATaGAGGAGTGGCAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GVWIWRILCGRCARRQWPVSAQR*RSGRRR
Trigger: CCTCCTCCTGCCACTCCTCCATCTCTGAGCTGATAC...AGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAATCCACACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642965.1
CDS-3UTR CCA 90 bp CAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTCAGGCTACCCTGCCCTaGGCTGTGGTCTCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: QQRGMWRKCSETWTGVGCQATLP*AVVSWL
Trigger: GAGCCAGGAGACCACAGCCCAGGGCAGGGTAGCCTG...ACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp TCATCAGGCTTGACAGCTGCTGGCTCACGCCCAAAAGTTCCATGGGTGCGCGTGCTGCCGTGCACCACATaGATCCCATCGGGCCCCTTG +
Preference number: 4 (lower is better)
Translates to: SSGLTAAGSRPKVPWVRVLPCTT*IPSGPL
Trigger: CAAGGGGCCCGATGGGATCCATGTGGTGCACGGCAG...CACGCGCACCCATGGAACTTTTGGGCGTGAGCCAGCAGCTGTCAAGCCTGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGTTTGTGCAGGGGTGTaGATTTGGCGGATTCTGTGC +
Preference number: 4 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLVCAGV*IWRILC
Trigger: GCACAGAATCCGCCAAATCCACACCCCTGCACAAAC...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGGGAGGAGGGCCTGTTTaGCCTCTTTCAGCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: WEGGGPVWPLSAQPEPSWGGGPV*PLSAQP
Trigger: AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCC...CCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TGCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCCAGCAGAGAGGGATGTaGCGGAAATGTAGCGAGACT +
Preference number: 4 (lower is better)
Translates to: CGVELGGRRACLASFSSAQQRGM*RKCSET
Trigger: AGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTG...GGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp TGGGAATTCTCAACAGGTCCCCAAGGAAGGATGAGGCCACATTCCTCCAAGTCAGGAGGCCTGCACAGGTaGGCGGAGGCCGGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: WEFSTGPQGRMRPHSSKSGGLHR*AEAGAA
Trigger: TGCTGCCCCGGCCTCCGCCCACCTGTGCAGGCCTCC...TGACTTGGAGGAATGTGGCCTCATCCTTCCTTGGGGACCTGTTGAGAATTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp CAAAGGCTGGGCCACGGCCTTGGCCCAGGCCCCACAGGACAGGAAGGGTGGTGGCTGTATCAGCTTGATTaGCCCCTCACGAATGATCTG +
Preference number: 4 (lower is better)
Translates to: QRLGHGLGPGPTGQEGWWLYQLD*PLTNDL
Trigger: CAGATCATTCGTGAGGGGCCAATCAAGCTGATACAG...CCACCACCCTTCCTGTCCTGTGGGGCCTGGGCCAAGGCCGTGGCCCAGCCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647092.1
CDS-3UTR TCA 90 bp GGATCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCAGGCGTGTCCTCGCTaGTCAGCAGGTATGTATCAA +
Preference number: 4 (lower is better)
Translates to: GSEQLMRAARAKPRLSPRQACPR*SAGMYQ
Trigger: TTGATACATACCTGCTGATCAGCGAGGACACGCCTG...CCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp GGGAGTGGGGCTCAGGGCTCCTCCCTAGGAATCATGGGGCCTTACCTCCCTCTAAGCCCTCGTACAGGCTaGTGTCGAAGTAGCTGCCAA +
Preference number: 4 (lower is better)
Translates to: GSGAQGSSLGIMGPYLPLSPRTG*CRSSCQ
Trigger: TTGGCAGCTACTTCGACATCAGCCTGTACGAGGGCT...TAGAGGGAGGTAAGGCCCCATGATTCCTAGGGAGGAGCCCTGAGCCCCACTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR TCA 90 bp GAGTGGGGCTCAGGGCTCCTCCCTAGGAATCATGGGGCCTTACCTCCCTCTAGAAGTAGGCGGGCTTGCTaGAGGTGGGAGGGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: EWGSGLLPRNHGALPPSRSRRAC*RWEGCH
Trigger: ATGACAACCCTCCCACCTTCAGCAAGCCCGCCTACT...TCTAGAGGGAGGTAAGGCCCCATGATTCCTAGGGAGGAGCCCTGAGCCCCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR TCA 90 bp GTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAAGACAGTGGCCAGTAGGCGGGCTTGCTaGAGGTGGGAGGGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: VDPPASETGAAGCRKTVASRRAC*RWEGCH
Trigger: ATGACAACCCTCCCACCTTCAGCAAGCCCGCCTACT...GGCCACTGTCTTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp AGGATGAGGCCACATTCCTCCAAGTCACTGCTCTGTCACCCAGACTTGGGGCGGGCAGAGACGTGGTGGTaGTTTCCCCTGAGCGGGCAT +
Preference number: 4 (lower is better)
Translates to: RMRPHSSKSLLCHPDLGRAETWW*FPLSGH
Trigger: ATGCCCGCTCAGGGGAAATCACCACCACGTCTCTGC...CCGCCCCAAGTCTGGGTGACAGAGCAGTGACTTGGAGGAATGTGGCCTCATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR TCA 90 bp GGGCCCAGCCAGTGCTCTCCAGGTGGCCCTGCTCATCTGTACCCTCTGGTCATGCCACTGCGCGAACGATaGGGATGTATTCAGACTTGG +
Preference number: 4 (lower is better)
Translates to: GPSQCSPGGPAHLYPLVMPLRER*GCIQTW
Trigger: CCAAGTCTGAATACATCCTCATCGTTCGCGCAGTGG...CATGACCAGAGGGTACAGATGAGCAGGGCCACCTGGAGAGCACTGGCTGGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR TCA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGTCATCTCCACCAGGTTaGTGTAGTAGGGTGCGTCCT +
Preference number: 4 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQSSPPG*CSRVRP
Trigger: AGGACGCACCCTACTACATCAACCTGGTGGAGATGA...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp CCCAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCCGATGGCCTCCAGGATaGGCATGTAGGCGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: PSLSSSWDYRYLTPHLAIRWPPG*ACRRLW
Trigger: CCACAGCCGCCTACATGCTCATCCTGGAGGCCATCG...GATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp CATCCACATTCCCTAGGTAAGTCTTCCCTATACCCGCTGCCCTGGGTCCAGCTGCGATGGCCTCCAGGATaGGCATGTAGGCGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: HPHSLGKSSLYPLPWVQLRWPPG*ACRRLW
Trigger: CCACAGCCGCCTACATGCTCATCCTGGAGGCCATCG...CAGCTGGACCCAGGGCAGCGGGTATAGGGAAGACTTACCTAGGGAATGTGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGGCATTGTCAATCACTaGGAGAGTGACCTCATAGGT +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRGIVNH*ESDLIG
Trigger: ACCTATGAGGTCACTCTCTCAGTGATTGACAATGCC...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CATCCAGGGCCAGCACCTGGATCAACTCTGAGCCCACCTTGGCGTCGGTGGCCAGATCACCACCTGCACTaGATTTTCGCGACGGTTGCT +
Preference number: 4 (lower is better)
Translates to: HPGPAPGSTLSPPWRRWPDHHLH*IFATVA
Trigger: AGCAACCGTCGCGAAAATTCAGTGCAGGTGGTGATC...TGGCCACCGACGCCAAGGTGGGCTCAGAGTTGATCCAGGTGCTGGCCCTGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGGTGGCCGGCAGTCATTaGCATCCAGCACTTGGATCA +
Preference number: 4 (lower is better)
Translates to: WEGGGPVWPLSAQPEPSWVAGSH*HPALGS
Trigger: TGATCCAAGTGCTGGATGTCAATGACTGCCGGCCAC...CCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp TCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTCATACACGCTTGTGCTaGACTGGGGCTTGGAGAACT +
Preference number: 4 (lower is better)
Translates to: SEQLMRAARAKPRLSPRPHTRLC*TGAWRT
Trigger: AGTTCTCCAAGCCCCAGTTCAGCACAAGCGTGTATG...AGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CTCCTGGCTCCTCGTCCAGCTCAGTCTGTATCAGCTCAGAGATGGAGGAGTGGCGCACCTCCTGCAGTGTaGGGTCAGCAACCAGGTCGA +
Preference number: 4 (lower is better)
Translates to: LLAPRPAQSVSAQRWRSGAPPAV*GQQPGR
Trigger: TCGACCTGGTTGCTGACCTCACACTGCAGGAGGTGC...GCCACTCCTCCATCTCTGAGCTGATACAGACTGAGCTGGACGAGGAGCCAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642965.1
CDS-3UTR TCA 90 bp GTAGGCCATGAAGAGGTCGAAGGTGCGCAGAATGCCGTCCATGCTCCCCATGGTGCACCTCCTGCAGTGTaGGGTCAGCAACCAGGTCGA +
Preference number: 4 (lower is better)
Translates to: VGHEEVEGAQNAVHAPHGAPPAV*GQQPGR
Trigger: TCGACCTGGTTGCTGACCTCACACTGCAGGAGGTGC...ACCATGGGGAGCATGGACGGCATTCTGCGCACCTTCGACCTCTTCATGGCCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGCAGCCACAATGGCCTTaGGCTTCCTCTTGTGTACAG +
Preference number: 4 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQQPQWP*ASSCVQ
Trigger: CTGTACACAAGAGGAAGCTCAAGGCCATTGTGGCTG...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp AATGGCCCCAGTGATGTTGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCGCGGCCACGATTCCCAGCTaGGCCAGCCACAATGGCCTT +
Preference number: 4 (lower is better)
Translates to: NGPSDVGEQVDELLLEAAATIPS*ASHNGL
Trigger: AAGGCCATTGTGGCTGGCTCAGCTGGGAATCGTGGC...CGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAACATCACTGGGGCCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGTGCAAAGAGCTTTTTaGGCCGCAGGTAATCCTCCA +
Preference number: 4 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPVQRAF*AAGNPP
Trigger: TGGAGGATTACCTGCGGCTCAAAAAGCTCTTTGCAC...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000642965.1
CDS-3UTR TCA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGAGGTCAGATGCTGAATaGGCGTCTGGCAAAAGTGGG +
Preference number: 4 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQRSDAE*ASGKSG
Trigger: CCCACTTTTGCCAGACGCTCATTCAGCATCTGACCT...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp GGGCATTTCCAGCAGCTGGAGGTGATGCCACCTGGACTCGGAGGAGGACAGCTCCACAAGCTGAGGCCCTaGTCGAGAGAACCCTCTACT +
Preference number: 4 (lower is better)
Translates to: GHFQQLEVMPPGLGGGQLHKLRP*SREPST
Trigger: AGTAGAGGGTTCTCTCGATCAGGGCCTCAGCTTGTG...GAGCTGTCCTCCTCCGAGTCCAGGTGGCATCACCTCCAGCTGCTGGAAATGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR TCA 90 bp CAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCATGCTTCCCTTTAGTCAAGTaGAATGCTCAGCCTACACCG +
Preference number: 4 (lower is better)
Translates to: QLPSLPGPLQRQLTPSPCFPLVK*NAQPTP
Trigger: CGGTGTAGGCTGAGCATTTCACTTGACTAAAGGGAA...GCATGGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp TGTCCACAAACATGCCCCCACATCCCCCTAGGTCTACCTGTAGATCCTCCTGCTGCCCCTCCACTTCCTTaGGAGGGCCCAGCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: CPQTCPHIPLGLPVDPPAAPPLP*EGPASA
Trigger: AGCACTGGCTGGGCCCTCTCAAGGAAGTGGAGGGGC...AGCAGGAGGATCTACAGGTAGACCTAGGGGGATGTGGGGGCATGTTTGTGGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR TCA 90 bp CTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCATCTGGGCCCCCTCCGGTCGGCCCTaGAGCCAGCCTCCGTTCTCC +
Preference number: 4 (lower is better)
Translates to: LLDERLLVKRCALVVIWAPSGRP*SQPPFS
Trigger: GGAGAACGGAGGCTGGCTTCAGGGCCGACCGGAGGG...GGCCCAGATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466757.8
CDS-3UTR GCA 90 bp AGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAGCCAAGCATCGCGCCTaGAGCCCGCGTCCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: SLSSSWDYRYLTPHLAISAKHRA*SPRPSL
Trigger: GAGAGAGGGACGCGGGCTGCAGGCGCGATGCTTGGC...TGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398809.9
CDS-3UTR GCA 90 bp CAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTTCTCTGTCCAGTGGCTaGCGGAGCCACACCACGCCA +
Preference number: 4 (lower is better)
Translates to: QQRGMWRKCSETWTGVGCSLSSG*RSHTTP
Trigger: TGGCGTGGTGTGGCTCCGGCAGCCACTGGACAGAGA...ACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp CATCCACATTCCCTAGGTAAGTCTTCCCTATACCCGCTGCCCTGGGTCCAGCTGTCTCTGTCCAGTGGCTaGCGGAGCCACACCACGCCA +
Preference number: 4 (lower is better)
Translates to: HPHSLGKSSLYPLPWVQLSLSSG*RSHTTP
Trigger: TGGCGTGGTGTGGCTCCGGCAGCCACTGGACAGAGA...CAGCTGGACCCAGGGCAGCGGGTATAGGGAAGACTTACCTAGGGAATGTGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp CCCTCGCCTTTCTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGGTGTATTCTCAGGGATaGGGACGCTGTAGGGCTGAT +
Preference number: 4 (lower is better)
Translates to: PSPFSQLPSLPGPLQRQLVYSQG*GRCRAD
Trigger: ATCAGCCCTACAGCGTCCGCATCCCTGAGAATACAC...CAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAGAAAGGCGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCAGTCCAGGGCAAAGATaGTGTTGGTATTCCCTGAAA +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSSPGQR*CWYSLK
Trigger: TTTCAGGGAATACCAACAGCATCTTTGCCCTGGACT...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp GATGCTCCCCGTCCCTGCAACCAACAGGTTCAGGAGGTCCCCAGGGAGCCAGTCCAGAGACGACGATTTTaGGCATCAGCTCGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: DAPRPCNQQVQEVPREPVQRRRF*ASARPH
Trigger: ATGAGGCCGAGCTGATGCGCAAAATCGTCGTCTCTG...GACTGGCTCCCTGGGGACCTCCTGAACCTGTTGGTTGCAGGGACGGGGAGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR GCA 90 bp TGTCCACAAACATGCCCCCACATCCCCCTAGGTCTACCTGTAGATCCTCCTGCTAGACCCCCGCCGGGATaGCTTCAAGCACCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: CPQTCPHIPLGLPVDPPARPPPG*LQAPRP
Trigger: TGGCCGAGGTGCTTGAAGGCATCCCGGCGGGGGTCT...AGCAGGAGGATCTACAGGTAGACCTAGGGGGATGTGGGGGCATGTTTGTGGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp CTGCCTTTGAGCTTCTGTCTTGTTGCTGTTGCAGGAGCCATGAGCACAGAGGGCGCATGCCCACCGGCATaGGGTAGGACACCAGGCCGT +
Preference number: 4 (lower is better)
Translates to: LPLSFCLVAVAGAMSTEGACPPA*GRTPGR
Trigger: ACGGCCTGGTGTCCTACCGCATGCCGGTGGGCATGC...GCCCTCTGTGCTCATGGCTCCTGCAACAGCAACAAGACAGAAGCTCAAAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp AACAGGTGGGAATTCTCAACAGGTCCCCAAGGAAGGATGAGGCCACATTCCTCCGCTGGTACTCCGCGATaGGCTCGCGGTCCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: NRWEFSTGPQGRMRPHSSAGTPR*ARGPAR
Trigger: CCGAGCTGGACCGCGAGCGCATCGCGGAGTACCAGC...GGAGGAATGTGGCCTCATCCTTCCTTGGGGACCTGTTGAGAATTCCCACCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR GCA 90 bp AGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAGCTGGTACTCCGCGATaGGCTCGCGGTCCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: SLSSSWDYRYLTPHLAISAGTPR*ARGPAR
Trigger: CCGAGCTGGACCGCGAGCGCATCGCGGAGTACCAGC...TGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp GTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAAGACAGTGGCCCGCTGGCCTCATAGCTaGTCTGCAGAAAGATGGGCC +
Preference number: 4 (lower is better)
Translates to: VDPPASETGAAGCRKTVARWPHS*SAERWA
Trigger: GGCCCATCTTTCTGCAGAGCAGCTATGAGGCCAGCG...GGCCACTGTCTTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp GGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTCCGGCCAGCCTCATCCAGGTCCAGTaGCTGGATGGTGATGAGGCT +
Preference number: 4 (lower is better)
Translates to: GMWRKCSETWTGVGCPASLIQVQ*LDGDEA
Trigger: AGCCTCATCACCATCCAGGCACTGGACCTGGATGAG...GCTGGCCGGACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGAATCCCTCCTGGCTATaGGTGGATTCTCCGGGTTGT +
Preference number: 4 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQNPSWL*VDSPGC
Trigger: ACAACCCGGAGAATCCACGCATAGCCAGGAGGGATT...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp CGTCGCGAAGTTTGTGCAGGGGTGTGGATTTGGCGGATTCTGTGCGGGCGTTGCGTCAGGGTCCACGGCTaGCACAGCAATGAGTGTGGT +
Preference number: 4 (lower is better)
Translates to: RREVCAGVWIWRILCGRCVRVHG*HSNECG
Trigger: ACCACACTCATTGCTGTGGCAGCCGTGGACCCTGAC...GCAACGCCCGCACAGAATCCGCCAAATCCACACCCCTGCACAAACTTCGCGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp TGGTCAGTGGCCATCATGGTGATGACCGAGGTGCCCGCCGGCTCATTCTCATACGGCAATGACCTTCCCTaGCGAGGAGTCCTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: WSVAIMVMTEVPAGSFSYGNDLP*RGVLQL
Trigger: CAGCTGGAGGACTCCTCGGCAGGGAAGGTCATTGCC...GTATGAGAATGAGCCGGCGGGCACCTCGGTCATCACCATGATGGCCACTGACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp TGCAGTGTGAGGTCAGCAACCAGGTCGAGGGTTGGGGAGGGTCCACGGGGAGGTAATTTTCGCGACGGTTaGTGGCTACATCCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: CSVRSATRSRVGEGPRGGNFRDG*WLHPQG
Trigger: ACCCTGGGGATGTAGCCAGCAACCGTCGCGAAAATT...ACCTCCCCGTGGACCCTCCCCAACCCTCGACCTGGTTGCTGACCTCACACTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTACTTGGATCACCACCTaGACTGAATTTTCGCGACGG +
Preference number: 4 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLTWITT*TEFSRR
Trigger: CCGTCGCGAAAATTCAGTGCAGGTGGTGATCCAAGT...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGATCTGAGCAGCTGATGCGGCGTTGCCCACGAGGGTaGCGCGTGGTGAGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: GQMLNERLAKVGSEQLMRRCPRG*RVVSAQ
Trigger: CTGAGCACTCACCACGCGGCACCCTCGTGGGCAACG...CCGCATCAGCTGCTCAGATCCCACTTTTGCCAGACGCTCATTCAGCATCTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp AGCCCGCAGGTATCGGTCATCATCAGGCTTGACAGCTGCTGGCTCACGCCCAAACGAAGGTGCGCAGAATaGCGTCCATGCTCCCCATGG +
Preference number: 4 (lower is better)
Translates to: SPQVSVIIRLDSCWLTPKRRCAE*RPCSPW
Trigger: CCATGGGGAGCATGGACGGCATTCTGCGCACCTTCG...TTTGGGCGTGAGCCAGCAGCTGTCAAGCCTGATGATGACCGATACCTGCGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GGATCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGATAAGCAGTTCTGTCTaGGCAAAGTTCACCCGGCCC +
Preference number: 4 (lower is better)
Translates to: GSEQLMRAARAKPRLSPRISSSV*AKFTRP
Trigger: GGGCCGGGTGAACTTTGCGCAGACAGAACTGCTTAT...CCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGAAAAGATTCCGTAGCTaGTCCTTGTTCTCATCGATC +
Preference number: 4 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWKRFRS*SLFSSI
Trigger: GATCGATGAGAACAAGGAGCAGCTACGGAATCTTTT...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp ACAGATCCCTGGGCCGCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTACTCTCGCACGATGATCGCCATCTaGAGGGCAGACATGTCATCC +
Preference number: 4 (lower is better)
Translates to: TDPWAASSSSSSSSSYSRTMIAI*RADMSS
Trigger: GGATGACATGTCTGCCCTGCAGATGGCGATCATCGT...GCGAGAGTAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGCGGCCCAGGGATCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGATCTGAGCAGCTGATGCGGGGTAGGTCATCCTCATaGTCCGCCTGGGCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GQMLNERLAKVGSEQLMRGRSSS*SAWAAS
Trigger: GCTGGCCGCCCAGGCGGAGCATGAGGATGACCTACC...CCGCATCAGCTGCTCAGATCCCACTTTTGCCAGACGCTCATTCAGCATCTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GTTGTGGCCTGCCAGGTCTCGGGCCACAATGTCCACCACGAAGTAGCCGGGGCTATCAGGCTTGACAGCTaGTGGCTCACGCCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: VVACQVSGHNVHHEVAGAIRLDS*WLTPKS
Trigger: ACTTTTGGGCGTGAGCCAGCAGCTGTCAAGCCTGAT...AGCCCCGGCTACTTCGTGGTGGACATTGTGGCCCGAGACCTGGCAGGCCACAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGCAGGAGGAGGCTTTTTaGACCATCCGCTGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQQEEAF*TIRCAK
Trigger: CTTTGCACAGCGGATGGTGCAAAAAGCCTCCTCCTG...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000642965.1
CDS-3UTR GCA 90 bp CCAGCTGCGATTGCTGGAGGCCTTGACGATGAAGGAGAAGATGGCTTCTCGCTCGTGCCCGTGCTGCCGTaGACCACATGGATCCCATCG +
Preference number: 4 (lower is better)
Translates to: PAAIAGGLDDEGEDGFSLVPVLP*TTWIPS
Trigger: CGATGGGATCCATGTGGTGCACGGCAGCACGGGCAC...GAGCGAGAAGCCATCTTCTCCTTCATCGTCAAGGCCTCCAGCAATCGCAGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp TGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCACCTGGACCGGTGGCCAGCAGCGTaGCCGTGCTGCCGTGCACCA +
Preference number: 4 (lower is better)
Translates to: CSLTLTFLSTWGCHLHLDRWPAA*PCCRAP
Trigger: TGGTGCACGGCAGCACGGGCACGCTGCTGGCCACCG...GTCCAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp TGGTCGTTGATGTCCTCTAGCACAACGCGCACCTCCTGCAGTGTGAGGTCAGCAGCAGCTGATGCGGGCTaGCAGGGCCAAGCCAAGGTT +
Preference number: 4 (lower is better)
Translates to: WSLMSSSTTRTSCSVRSAAADAG*QGQAKV
Trigger: AACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGC...TGCTGACCTCACACTGCAGGAGGTGCGCGTTGTGCTAGAGGACATCAACGACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp TCCACAAACATGCCCCCACATCCCCCTAGGTCTACCTGTAGATCCTCCTGCTTCGGTGCTGCCAGCATCTaGCTGGTGCCCTGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: STNMPPHPPRSTCRSSCFGAASI*LVPCGS
Trigger: GCTCCCACAGGGCACCAGGCAGATGCTGGCAGCACC...GAAGCAGGAGGATCTACAGGTAGACCTAGGGGGATGTGGGGGCATGTTTGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp ACCCGTGGGCCCCCAGTTTGCAGCTTTGGTATTAGATTACTGCTAGGGACCCTGGGGTTTCCCGGGTGCTaGCAGCATCTGCCTGGTGCC +
Preference number: 4 (lower is better)
Translates to: TRGPPVCSFGIRLLLGTLGFPGC*QHLPGA
Trigger: GGCACCAGGCAGATGCTGGCAGCACCCGGGAAACCC...CAGGGTCCCTAGCAGTAATCTAATACCAAAGCTGCAAACTGGGGGCCCACGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp CATCCACATTCCCTAGGTAAGTCTTCCCTATACCCGCTGCCCTGGGTCCAGCTGCCGAAGCTCCTTGCATaGCCAGGCCAGCGCCCTTTC +
Preference number: 4 (lower is better)
Translates to: HPHSLGKSSLYPLPWVQLPKLLA*PGQRPF
Trigger: GAAAGGGCGCTGGCCTGGGCATGCAAGGAGCTTCGG...CAGCTGGACCCAGGGCAGCGGGTATAGGGAAGACTTACCTAGGGAATGTGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp CATCCACATTCCCTAGGTAAGTCTTCCCTATACCCGCTGCCCTGGGTCCAGCTGCTGTTCATGACGCTCTaGAAGCCGGCCGCGCTGGAC +
Preference number: 4 (lower is better)
Translates to: HPHSLGKSSLYPLPWVQLLFMTL*KPAALD
Trigger: GTCCAGCGCGGCCGGCTTGCAGAGCGTCATGAACAG...CAGCTGGACCCAGGGCAGCGGGTATAGGGAAGACTTACCTAGGGAATGTGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp GCTGCCCAGCTCCTGTCCCAGTCAGCTGGCCAGGATCCCACCACAAAGCTGCCCGAGCTTCTGTCTTGTTaGTGTTGCAGGAGCCATGAG +
Preference number: 4 (lower is better)
Translates to: AAQLLSQSAGQDPTTKLPELLSC*CCRSHE
Trigger: CTCATGGCTCCTGCAACAGCAACAAGACAGAAGCTC...GGGCAGCTTTGTGGTGGGATCCTGGCCAGCTGACTGGGACAGGAGCTGGGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp CCCTCGCCTTTCTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGGCCCAGCTCCATCACTaGTCAGCTGTGTGTACACTT +
Preference number: 4 (lower is better)
Translates to: PSPFSQLPSLPGPLQRQLAQLHH*SAVCTL
Trigger: AAGTGTACACACAGCTGAGCAGTGATGGAGCTGGGC...CAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAGAAAGGCGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp GTGGCCATGATGCTGTCCAGTTTAACAGTGCCTTGCCCCCATCCACATTCCCTAACAGGGGGCAGCGGCTaGTCAGCCCCAGACACAGGG +
Preference number: 4 (lower is better)
Translates to: VAMMLSSLTVPCPHPHSLTGGSG*SAPDTG
Trigger: CCCTGTGTCTGGGGCTGAGCAGCCGCTGCCCCCTGT...TAGGGAATGTGGATGGGGGCAAGGCACTGTTAAACTGGACAGCATCATGGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp GGGCACAGGGTGGAACAGGAAGAGGGCCTGAGCTTGGGCCCAGCTCCATCACTGACAAGGACCGTCTGCTaGACTGCGTCTAATGGGATG +
Preference number: 4 (lower is better)
Translates to: GHRVEQEEGLSLGPAPSLTRTVC*TASNGM
Trigger: CATCCCATTAGACGCAGTGCAGCAGACGGTCCTTGT...CAGTGATGGAGCTGGGCCCAAGCTCAGGCCCTCTTCCTGTTCCACCCTGTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp CATCCACATTCCCTAGGTAAGTCTTCCCTATACCCGCTGCCCTGGGTCCAGCTGAGAGGCCAGGGCGGGTaGTGCAAGATGCTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: HPHSLGKSSLYPLPWVQLRGQGG*CKMLWP
Trigger: AGGCCACAGCATCTTGCAGCACCCGCCCTGGCCTCT...CAGCTGGACCCAGGGCAGCGGGTATAGGGAAGACTTACCTAGGGAATGTGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466757.8
CDS-3UTR CCA 90 bp CCCAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCCGCGGGCGCTGTCAATaGCGAAGAATTGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: PSLSSSWDYRYLTPHLAIRGRCQ*RRIGRG
Trigger: CCCCCTCCCAATTCTTCGCCATTGACAGCGCCCGCG...GATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp AGTGGGGCTCAGGGCTCCTCCCTAGGAATCATGGGGCCTTACCTCCCTCTAGAAGCTGGTAGGCCTGTGTaGTCTCGTAGTCCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: SGAQGSSLGIMGPYLPLEAGRPV*SRSPAP
Trigger: GGGAGCTGGACTACGAGACCACACAGGCCTACCAGC...TTCTAGAGGGAGGTAAGGCCCCATGATTCCTAGGGAGGAGCCCTGAGCCCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp CCCTCGCCTTTCTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGTCCTTGTCCACCACCTaGATGAAGAGTGGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: PSPFSQLPSLPGPLQRQLSLSTT*MKSGRA
Trigger: TGCCCTTCCACTCTTCATCCAGGTGGTGGACAAGGA...CAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAGAAAGGCGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGGGGGAGATGATGAAGTaGTGGGAGTTGTTCCCCACC +
Preference number: 4 (lower is better)
Translates to: WEGGGPVWPLSAQPEPSWGEMMK*WELFPT
Trigger: GGTGGGGAACAACTCCCACCACTTCATCATCTCCCC...CCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp TCTACCTGTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAAGACATGTCCGCCTTCCCCTaGACGGAGGTCGGGGAGATG +
Preference number: 4 (lower is better)
Translates to: STCRSSCFRDRCCRLQEDMSAFP*TEVGEM
Trigger: CATCTCCCCGACCTCCGTCCAGGGGAAGGCGGACAT...GTCTTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp GGGCACAGGGTGGAACAGGAAGAGGGCCTGAGCTTGGGCCCAGCTCCATCACTGCGTAGTCCAGTGGGATaGCCACCCGAATACGAATGT +
Preference number: 4 (lower is better)
Translates to: GHRVEQEEGLSLGPAPSLRSPVG*PPEYEC
Trigger: ACATTCGTATTCGGGTGGCCATCCCACTGGACTACG...CAGTGATGGAGCTGGGCCCAAGCTCAGGCCCTCTTCCTGTTCCACCCTGTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCAGGCACACTCTCATTaGCAAAGAGATCAAAGTCGT +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSQAHSH*QRDQSR
Trigger: ACGACTTTGATCTCTTTGCCAATGAGAGTGTGCCTG...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GCCACATTCCTCCAAGTCACTGCTCTGTCACCCAGACTTGGGGCGGGGAGTGGGGCTGATGTTGTACAGTaGCTGGCTGAAGATGGGCCG +
Preference number: 4 (lower is better)
Translates to: ATFLQVTALSPRLGAGSGADVVQ*LAEDGP
Trigger: CGGCCCATCTTCAGCCAGCCACTGTACAACATCAGC...CCCACTCCCCGCCCCAAGTCTGGGTGACAGAGCAGTGACTTGGAGGAATGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp TTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCAGCGGTCCAGGTCTGTaGCATTCAGGAACAGCACCG +
Preference number: 4 (lower is better)
Translates to: FGLFQLSLSQAGPQTLGPSGPGL*HSGTAP
Trigger: CGGTGCTGTTCCTGAATGCCACAGACCTGGACCGCT...GGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGCTGTAGAACTTGTTaGGTGGCTGGATGCTGTACA +
Preference number: 4 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLGCRTC*VAGCCT
Trigger: TGTACAGCATCCAGCCACCCAACAAGTTCTACAGCC...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp TGGACGTCCAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGCTGTGGCACTGCTGGTaGCTTTCAGAGGGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: WTSSREGCGGNVARLGLELWHCW*LSEGAC
Trigger: GCAGGCCCCCTCTGAAAGCCACCAGCAGTGCCACAG...CTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTGGACGTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp ATGAACCTTGGTAGATGCTCCCCGTCCCTGCAACCAACAGGTTCAGGAGGTCCCCCACCACTTGGTAGATaGAGACCCCCGCCGGGATGC +
Preference number: 4 (lower is better)
Translates to: MNLGRCSPSLQPTGSGGPPPLGR*RPPPGC
Trigger: GCATCCCGGCGGGGGTCTCCATCTACCAAGTGGTGG...GGGACCTCCTGAACCTGTTGGTTGCAGGGACGGGGAGCATCTACCAAGGTTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGCCTCATCGAGGTCGATaGCCACCACTTGGTAGATGG +
Preference number: 4 (lower is better)
Translates to: WEGGGPVWPLSAQPEPSWPHRGR*PPLGRW
Trigger: CCATCTACCAAGTGGTGGCCATCGACCTCGATGAGG...CCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp AAAAACATGGCAAGGACCCAACTAAACACACCCGTGGGCCCCCAGTTTGCAGCTGCCACCACCCGCAGCTaGTACTCCGCGATGCGCTCG +
Preference number: 4 (lower is better)
Translates to: KNMARTQLNTPVGPQFAAATTRS*YSAMRS
Trigger: CGAGCGCATCGCGGAGTACCAGCTGCGGGTGGTGGC...AGCTGCAAACTGGGGGCCCACGGGTGTGTTTAGTTGGGTCCTTGCCATGTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp TTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCGTCACCTGCAGGATGTaGTCCTTCTTCCGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: FGLFQLSLSQAGPQTLGPVTCRM*SFFRGG
Trigger: CCCTCCACGGAAGAAGGACCACATCCTGCAGGTGAC...GGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGGATAAGATGGGGCACTaGTCTGTGGCAGTGACGATC +
Preference number: 4 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQDKMGH*SVAVTI
Trigger: GATCGTCACTGCCACAGACCAGTGCCCCATCTTATC...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp TTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCCTGAGTCTCGGTCATaGGCCAGGAAGGTCCACACT +
Preference number: 4 (lower is better)
Translates to: FGLFQLSLSQAGPQTLGPPESRS*ARKVHT
Trigger: AGTGTGGACCTTCCTGGCCCATGACCGAGACTCAGG...GGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp CCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGACAATGCCGACAATGTaGTACTCTAGCTTTGGGTTG +
Preference number: 4 (lower is better)
Translates to: PPLRLLSRRGWCLRGGAGTMPTM*YSSFGL
Trigger: CAACCCAAAGCTAGAGTACCACATTGTCGGCATTGT...CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GGATCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCAGCTCCCGATTCATaGGGGACTTCACCATTACAG +
Preference number: 4 (lower is better)
Translates to: GSEQLMRAARAKPRLSPRPAPDS*GTSPLQ
Trigger: CTGTAATGGTGAAGTCCCCCATGAATCGGGAGCTGG...CCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CGTTGGGGCCCTCATCTGCATCCACTGCGCCTGTCACGTTGCCCACGAGGGTGCGCTCTGGTAGGTCGCTaGCATTGTCAATCACTGAGA +
Preference number: 4 (lower is better)
Translates to: RWGPHLHPLRLSRCPRGCALVGR*HCQSLR
Trigger: TCTCAGTGATTGACAATGCCAGCGACCTACCAGAGC...GCACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCAGATGAGGGCCCCAACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTGAGGAGTCCTCCAGCTaGACATACCCTGGGGGCACC +
Preference number: 4 (lower is better)
Translates to: QQRGMWRKCSETWTGVGCEESSS*TYPGGT
Trigger: GGTGCCCCCAGGGTATGTCCAGCTGGAGGACTCCTC...ACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp TTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGGGAGTTGACATCCAGCACTTaGATCACCACCTGCACTGAA +
Preference number: 4 (lower is better)
Translates to: LRLLSRRGWCLRGGAGRELTSST*ITTCTE
Trigger: TTCAGTGCAGGTGGTGATCCAAGTGCTGGATGTCAA...CTCCCTCCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGTTGGGACCTTCATCCTaGTCAGTGGCCATCATGGTG +
Preference number: 4 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQLGPSS*SVAIMV
Trigger: CACCATGATGGCCACTGACCAGGATGAAGGTCCCAA...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CGTTGTGGCCTGCCAGGTCTCGGGCCACAATGTCCACCACGAAGTAGCCGGGGCAGGTCAACTCTCCATTaGGACCTTCATCCTGGTCAG +
Preference number: 4 (lower is better)
Translates to: RCGLPGLGPQCPPRSSRGRSTLH*DLHPGQ
Trigger: CTGACCAGGATGAAGGTCCCAATGGAGAGTTGACCT...GCCCCGGCTACTTCGTGGTGGACATTGTGGCCCGAGACCTGGCAGGCCACAACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CCTGGGCTGTGGTCTCCTGGCTCCTCGTCCAGCTCAGTCTGTATCAGCTTGATTGCAGTGGCCGCTGTGTaGTCACCAAGCCCGAGTCCA +
Preference number: 4 (lower is better)
Translates to: PGLWSPGSSSSSVCISLIAVAAV*SPSPSP
Trigger: TGGACTCGGGCTTGGTGACCACACAGCGGCCACTGC...AATCAAGCTGATACAGACTGAGCTGGACGAGGAGCCAGGAGACCACAGCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647092.1
CDS-3UTR CCA 90 bp CAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTGGTGGTGCCCCAGAGTaGGGGCTCTCCACCATCTGT +
Preference number: 4 (lower is better)
Translates to: QQRGMWRKCSETWTGVGCGGAPE*GLSTIC
Trigger: ACAGATGGTGGAGAGCCCCCACTCTGGGGCACCACC...ACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp TGGACGTCCAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGGATGGTGCCGTTGGGTaGGCGCACAAAGACAGGGCG +
Preference number: 4 (lower is better)
Translates to: WTSSREGCGGNVARLGLEDGAVG*AHKDRA
Trigger: CGCCCTGTCTTTGTGCGCCCACCCAACGGCACCATC...CTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTGGACGTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp GGCCACAATGTCCACCACGAAGTAGCCGGGGCTGTAGGCCATGAAGAGGTCGAAGGAGGATGGTGCCGTTaGGTGGGCGCACAAAGACAG +
Preference number: 4 (lower is better)
Translates to: GHNVHHEVAGAVGHEEVEGGWCR*VGAQRQ
Trigger: CTGTCTTTGTGCGCCCACCCAACGGCACCATCCTCC...TTCGACCTCTTCATGGCCTACAGCCCCGGCTACTTCGTGGTGGACATTGTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CATCCAGGGCCAGCACCTGGATCAACTCTGAGCCCACCTTGGCGTCGGTGGCCAATCTCCTCTCTGATGTaGAGGATGGTGCCGTTGGGT +
Preference number: 4 (lower is better)
Translates to: HPGPAPGSTLSPPWRRWPISSLM*RMVPLG
Trigger: ACCCAACGGCACCATCCTCCACATCAGAGAGGAGAT...TGGCCACCGACGCCAAGGTGGGCTCAGAGTTGATCCAGGTGCTGGCCCTGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TTGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCGCGCACACGGTCGGGGATCCCTCATCCTTGTCCGTaGCGTAGACCTCGTACACGT +
Preference number: 4 (lower is better)
Translates to: LESRWMNSSSKPRTRSGIPHPCP*RRPRTR
Trigger: ACGTGTACGAGGTCTACGCCACGGACAAGGATGAGG...GATCCCCGACCGTGTGCGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CCCGCCGGCTCATTCTCATACACGCTTGTGCTGAACTGGGGCTTGGAGAACTGTAGTCTCGTATGGCACTaGCTGGCCCAGGTCGCTGGC +
Preference number: 4 (lower is better)
Translates to: PAGSFSYTLVLNWGLENCSLVWH*LAQVAG
Trigger: GCCAGCGACCTGGGCCAGCCAGTGCCATACGAGACT...ACAGTTCTCCAAGCCCCAGTTCAGCACAAGCGTGTATGAGAATGAGCCGGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTCCATCGGGCTGCAGATaGAAGTTCTTCTCTTCGTTG +
Preference number: 4 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPPSGCR*KFFSSL
Trigger: CAACGAAGAGAAGAACTTCCATCTGCAGCCCGATGG...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CCGGTCCAGAGAAGACAGCACATAGATGTCACCCGTGGTGGGGTTGATGGCAAAAACCAGGTCGAGGGTTaGGGAGGGTCCACGGGGAGG +
Preference number: 4 (lower is better)
Translates to: PVQRRQHIDVTRGGVDGKNQVEG*GGSTGR
Trigger: CCTCCCCGTGGACCCTCCCCAACCCTCGACCTGGTT...TTTGCCATCAACCCCACCACGGGTGACATCTATGTGCTGTCTTCTCTGGACCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGGTGAAGCGTGGTGGCTaGTCGTTGATGTCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: WEGGGPVWPLSAQPEPSWVKRGG*SLMSSS
Trigger: GCTAGAGGACATCAACGACCAGCCACCACGCTTCAC...CCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTCCACCTTGGCGTCGGTaGCCACCCCTGCAGTGTACT +
Preference number: 4 (lower is better)
Translates to: QQRGMWRKCSETWTGVGCPPWRR*PPLQCT
Trigger: AGTACACTGCAGGGGTGGCCACCGACGCCAAGGTGG...ACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTCCCGGAAGTAGTGGATaGCCAGAATGCTGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLPGSSG*PECCRR
Trigger: TCTTCTACAGCATTCTGGCCATCCACTACTTCCGGG...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTATGTTGGAGAGCAGGTaGATGAACTCCTCCTCGAAG +
Preference number: 4 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLMLESR*MNSSSK
Trigger: CTTCGAGGAGGAGTTCATCCACCTGCTCTCCAACAT...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp ACGGTCGGGGATCTCGTTAATGACGATCTTGACGCGCTGGTCGTCCCTCAGGATGCAGCCGGACAGAGATaGCAGGCTGCACGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: TVGDLVNDDLDALVVPQDAAGQR*QAARPG
Trigger: TCCTGGACGTGCAGCCTGCCATCTCTGTCCGGCTGC...ATCCTGAGGGACGACCAGCGCGTCAAGATCGTCATTAACGAGATCCCCGACCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTCCGGCCAGCAGGCTTGACAGCTGCTaGCTCACGCCCAAAAGTTCC +
Preference number: 4 (lower is better)
Translates to: GMWRKCSETWTGVGCPASRLDSC*LTPKSS
Trigger: GGAACTTTTGGGCGTGAGCCAGCAGCTGTCAAGCCT...GCTGGCCGGACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp TCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTCCCTCACGAATGATCTaGCCCAGCTTGGCAATGTTG +
Preference number: 4 (lower is better)
Translates to: SEQLMRAARAKPRLSPRPPSRMI*PSLAML
Trigger: CAACATTGCCAAGCTGGGCCAGATCATTCGTGAGGG...AGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GCCGGGGCTGTAGGCCATGAAGAGGTCGAAGGTGCGCAGAATGCCGTCCATGCTCAGCGAGCCCTTGATTaGCCCCTCACGAATGATCTG +
Preference number: 4 (lower is better)
Translates to: AGAVGHEEVEGAQNAVHAQRALD*PLTNDL
Trigger: CAGATCATTCGTGAGGGGCCAATCAAGGGCTCGCTG...AGCATGGACGGCATTCTGCGCACCTTCGACCTCTTCATGGCCTACAGCCCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642965.1
CDS-3UTR CCA 90 bp GTGGATAAGCAGTTCTGTCTGCGCAAAGTTCACCCGGCCCTTCTTGTCCACATGCCCTGCCCTGGGCTGTaGTCTCCTGGCTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: VDKQFCLRKVHPALLVHMPCPGL*SPGSSS
Trigger: GGACGAGGAGCCAGGAGACCACAGCCCAGGGCAGGG...CATGTGGACAAGAAGGGCCGGGTGAACTTTGCGCAGACAGAACTGCTTATCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TGCAGTGTGAGGTCAGCAACCAGGTCGAGGGTTGGGGAGGGTCCACGGGGAGGTGTTTGTGCAGGGGTGTaGATTTGGCGGATTCTGTGC +
Preference number: 4 (lower is better)
Translates to: CSVRSATRSRVGEGPRGGVCAGV*IWRILC
Trigger: GCACAGAATCCGCCAAATCCACACCCCTGCACAAAC...ACCTCCCCGTGGACCCTCCCCAACCCTCGACCTGGTTGCTGACCTCACACTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGATCTGAGCAGCTGATGCGGCCTGGGAGGGGACGGTaGATGGGTGCTGCTCACACC +
Preference number: 4 (lower is better)
Translates to: GQMLNERLAKVGSEQLMRPGRGR*MGAAHT
Trigger: GGTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGG...CCGCATCAGCTGCTCAGATCCCACTTTTGCCAGACGCTCATTCAGCATCTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GGATCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGAAATGTAGCGAGACTTaGACTGGAGTCGGGTGTCCG +
Preference number: 4 (lower is better)
Translates to: GSEQLMRAARAKPRLSPRKCSET*TGVGCP
Trigger: CGGACACCCGACTCCAGTCCAAGTCTCGCTACATTT...CCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp GGATCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCAGCAGAGAGGGATGTaGCGGAAATGTAGCGAGACT +
Preference number: 4 (lower is better)
Translates to: GSEQLMRAARAKPRLSPRQQRGM*RKCSET
Trigger: AGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTG...CCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTCTTCTGTTTATAAGCTaGGCACACATTTGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: WTGVGCPASRGCPRWASLLLFIS*AHIWEA
Trigger: GGCTTCCCAAATGTGTGCCCAGCTTATAAACAGAAG...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp CCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGCTTCTGTTTATAAGCTaGGCACACATTTGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: PPLRLLSRRGWCLRGGAGLLFIS*AHIWEA
Trigger: GGCTTCCCAAATGTGTGCCCAGCTTATAAACAGAAG...CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp TCATCAGGCTTGACAGCTGCTGGCTCACGCCCAAAAGTTCCATGGGTGCGCGTGACCATTACAGATCCCTaGGCCGCCTCCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SSGLTAAGSRPKVPWVRVTITDP*AASSSS
Trigger: GGAGGAGGAGGAGGCGGCCCAGGGATCTGTAATGGT...CACGCGCACCCATGGAACTTTTGGGCGTGAGCCAGCAGCTGTCAAGCCTGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CTCCAGGTGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTGGCAGAGGGAGGACCTaGGCTGCCCAGCTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: LQVPKPSMEKLPNGKGSLGRGRT*AAQLLS
Trigger: GGACAGGAGCTGGGCAGCCCAGGTCCTCCCTCTGCC...AAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCACCTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp ATGAGGATTGATTTGAAAATGCGGACAGGCCACCGCCCTCTTGTCTGCATGGCAGCACAGCTTCCGCCATaGCCGGCCCACCGTCCCTCG +
Preference number: 4 (lower is better)
Translates to: MRIDLKMRTGHRPLVCMAAQLPP*PAHRPS
Trigger: CGAGGGACGGTGGGCCGGCCATGGCGGAAGCTGTGC...TGCCATGCAGACAAGAGGGCGGTGGCCTGTCCGCATTTTCAAATCAATCCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp GTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAAGACAGTGGCCCTATACCCGCTGCCCTaGGTCCAGCTGATCTGCCTT +
Preference number: 4 (lower is better)
Translates to: VDPPASETGAAGCRKTVALYPLP*VQLICL
Trigger: AAGGCAGATCAGCTGGACCCAGGGCAGCGGGTATAG...GGCCACTGTCTTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CATCCAGGGCCAGCACCTGGATCAACTCTGAGCCCACCTTGGCGTCGGTGGCCAAACCAGGGGAGCAAGTaGAAGCCCATTTGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: HPGPAPGSTLSPPWRRWPNQGSK*KPIWSG
Trigger: TCCACTCCAAATGGGCTTCCACTTGCTCCCCTGGTT...TGGCCACCGACGCCAAGGTGGGCTCAGAGTTGATCCAGGTGCTGGCCCTGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642965.1
CDS-3UTR CCA 90 bp CTCCTGGCTCCTCGTCCAGCTCAGTCTGTATCAGCTCAGAGATGGAGGAGTGGCGGTGGAAACAGGGAGTaGGGAGGGGAAGAGGCACTG +
Preference number: 4 (lower is better)
Translates to: LLAPRPAQSVSAQRWRSGGGNRE*GGEEAL
Trigger: CAGTGCCTCTTCCCCTCCCCACTCCCTGTTTCCACC...GCCACTCCTCCATCTCTGAGCTGATACAGACTGAGCTGGACGAGGAGCCAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR CAA 72 bp GGGCCAGGAGTCAGGAGACCTGCTTCTGACCTTCACTaGGCCATTGGCTCACAATGTGGCCTTGGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: GPGVRRPASDLH*AIGSQCGLGLP
Trigger: GGGAAGGCCAAGGCCACATTGTGAGCCAATGGCCAAGTGAAGGTCAGAAGCAGGTCTCCTGACTCCTGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CAA 72 bp ATGGTGCCGTTGGGTGGGCGCACAAAGACAGGGCGGTaGTCATTGACGTCGATGACCTCCACCAGGAGCATG +
Preference number: 4 (lower is better)
Translates to: MVPLGGRTKTGR*SLTSMTSTRSM
Trigger: CATGCTCCTGGTGGAGGTCATCGACGTCAATGACAACCGCCCTGTCTTTGTGCGCCCACCCAACGGCACCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CAA 72 bp AGCGGGATCTCCTCTCTGATGTGGAGGATGGTGCCGTaGGGTGGGCGCACAAAGACAGGGCGGTTGTCATTG +
Preference number: 4 (lower is better)
Translates to: SGISSLMWRMVP*GGRTKTGRLSL
Trigger: CAATGACAACCGCCCTGTCTTTGTGCGCCCACCCAACGGCACCATCCTCCACATCAGAGAGGAGATCCCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CAA 72 bp GGCCCCTCACGAATGATCTGGCCCAGCTTGGCAATGTaGTCATACTCCTGGATGGCAGCCCGCAGGTATCGG +
Preference number: 4 (lower is better)
Translates to: GPSRMIWPSLAM*SYSWMAARRYR
Trigger: CCGATACCTGCGGGCTGCCATCCAGGAGTATGACAACATTGCCAAGCTGGGCCAGATCATTCGTGAGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp GAGTGGGGCTCAGGGCTCCTCCCTAGGAATCATGGGGCCTTACCTCCCTCTAGAAGGTCAGCACTCCGCTaGTGTAGTCCAGGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: EWGSGLLPRNHGALPPSRRSALR*CSPGQR
Trigger: TCTTTGCCCTGGACTACATCAGCGGAGTGCTGACCT...TCTAGAGGGAGGTAAGGCCCCATGATTCCTAGGGAGGAGCCCTGAGCCCCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR TCA 90 bp AGGTCCCCAGGGAGCCAGTCCAGAGTGATCCAGCTGCAAAGCCCTTGGGAAGAGCGTTCTCGTACAGGCTaGTGTTGTACAGTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: RSPGSQSRVIQLQSPWEERSRTG*CCTVAG
Trigger: GCCAGCCACTGTACAACATCAGCCTGTACGAGAACG...CTCTTCCCAAGGGCTTTGCAGCTGGATCACTCTGGACTGGCTCCCTGGGGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR TCA 90 bp GGGAGTGGGGCTCAGGGCTCCTCCCTAGGAATCATGGGGCCTTACCTCCCTCTACAGCATCCATGGCCATaGCCGTCAGATAAATCAGCC +
Preference number: 4 (lower is better)
Translates to: GSGAQGSSLGIMGPYLPLQHPWP*PSDKSA
Trigger: GGCTGATTTATCTGACGGTCATGGCCATGGATGCTG...TAGAGGGAGGTAAGGCCCCATGATTCCTAGGGAGGAGCCCTGAGCCCCACTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR TCA 90 bp CAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCCCCCTGAGCGGGCATTaGTCCGAAACTGGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: QPLKQLGLQVPNTTLGHLPLSGH*SETGWS
Trigger: GCTCCACCCAGTTTCGGATCAATGCCCGCTCAGGGG...GAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp CTGCCTTTGAGCTTCTGTCTTGTTGCTGTTGCAGGAGCCATGAGCACAGAGGGCCCCCTGAGCGGGCATTaGTCCGAAACTGGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: LPLSFCLVAVAGAMSTEGPLSGH*SETGWS
Trigger: GCTCCACCCAGTTTCGGATCAATGCCCGCTCAGGGG...GCCCTCTGTGCTCATGGCTCCTGCAACAGCAACAAGACAGAAGCTCAAAGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp CCCCAAGGAAGGATGAGGCCACATTCCTCCAAGTCACTGCTCTGTCACCCAGACCCAGCACATGGATGGTaGGCGTGCTGGTGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: PQGRMRPHSSKSLLCHPDPAHGW*ACWWSS
Trigger: AGAGCTCCACCAGCACGCTCACCATCCATGTGCTGG...GTCTGGGTGACAGAGCAGTGACTTGGAGGAATGTGGCCTCATCCTTCCTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR TCA 90 bp TCTACCTGTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAAGACCCAGCACATGGATGGTaGGCGTGCTGGTGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: STCRSSCFRDRCCRLQEDPAHGW*ACWWSS
Trigger: AGAGCTCCACCAGCACGCTCACCATCCATGTGCTGG...GTCTTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp AGAAGGAAAAGTCCAGGAGGGGGAGGGCTCTCAATTGGGTTTCAGGCACCAGGCCGCGGTAACCCACGCTaGACTTCCCATCCACGTTGC +
Preference number: 4 (lower is better)
Translates to: RRKSPGGGGLSIGFQAPGRGNPR*TSHPRC
Trigger: GCAACGTGGATGGGAAGTTCAGCGTGGGTTACCGCG...GCCTGGTGCCTGAAACCCAATTGAGAGCCCTCCCCCTCCTGGACTTTTCCTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR TCA 90 bp GGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGATCTGAGCAGCTGATGCGGCGATGGCCTCCAGGATaGGCATGTAGGCGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: GQMLNERLAKVGSEQLMRRWPPG*ACRRLW
Trigger: CCACAGCCGCCTACATGCTCATCCTGGAGGCCATCG...CCGCATCAGCTGCTCAGATCCCACTTTTGCCAGACGCTCATTCAGCATCTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp AGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCATGCAGAAGCCCTGGTTaGAGGGCGGGGCCTGGTCAG +
Preference number: 4 (lower is better)
Translates to: SLSSSWDYRYLTPHLAISCRSPG*RAGPGQ
Trigger: CTGACCAGGCCCCGCCCTTCAACCAGGGCTTCTGCA...TGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp CTGATGTGGAGGATGGTGCCGTTGGGTGGGCGCACAAAGACAGGGCGGTTGTCATGGCATTTGGCACACTaGCAGAGCGCTCTGGTAGGT +
Preference number: 4 (lower is better)
Translates to: LMWRMVPLGGRTKTGRLSWHLAH*QSALVG
Trigger: ACCTACCAGAGCGCTCTGTCAGTGTGCCAAATGCCA...TGACAACCGCCCTGTCTTTGTGCGCCCACCCAACGGCACCATCCTCCACATCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTTGGGGTTGTTGTCATTaGTGTCCACGATTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLWGCCH*CPRFPG
Trigger: ACCTGGAAATCGTGGACATCAATGACAACAACCCCA...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp TGGTCAGTGGCCATCATGGTGATGACCGAGGTGCCCGCCGGCTCATTCTCATACCACCCGTGGTGGGGTTaGTGGCAAACTTGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: WSVAIMVMTEVPAGSFSYHPWWG*WQTCSL
Trigger: GAGAGAGCAAGTTTGCCATCAACCCCACCACGGGTG...GTATGAGAATGAGCCGGCGGGCACCTCGGTCATCACCATGATGGCCACTGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGGATCACCACCTGCACTaGATTTTCGCGACGGTTGCT +
Preference number: 4 (lower is better)
Translates to: WEGGGPVWPLSAQPEPSWDHHLH*IFATVA
Trigger: AGCAACCGTCGCGAAAATTCAGTGCAGGTGGTGATC...CCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CTCGTAGTCCACTGTCCGGTTGGCAATGACCTTCCCTGCCGAGGAGTCCTCCAGGTGGCCGGCAGTCATTaGCATCCAGCACTTGGATCA +
Preference number: 4 (lower is better)
Translates to: LVVHCPVGNDLPCRGVLQVAGSH*HPALGS
Trigger: TGATCCAAGTGCTGGATGTCAATGACTGCCGGCCAC...CTGGAGGACTCCTCGGCAGGGAAGGTCATTGCCAACCGGACAGTGGACTACGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CTCGTAGTCCACTGTCCGGTTGGCAATGACCTTCCCTGCCGAGGAGTCCTCCAGCCACCACGGTCAGACTaGACTTCTCGTAGGACTGCA +
Preference number: 4 (lower is better)
Translates to: LVVHCPVGNDLPCRGVLQPPRSD*TSRRTA
Trigger: TGCAGTCCTACGAGAAGTTCAGTCTGACCGTGGTGG...CTGGAGGACTCCTCGGCAGGGAAGGTCATTGCCAACCGGACAGTGGACTACGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp TCATCAGGCTTGACAGCTGCTGGCTCACGCCCAAAAGTTCCATGGGTGCGCGTGCGTTGCCGGCTGCGATaGAGTAGTACACGATCGCGT +
Preference number: 4 (lower is better)
Translates to: SSGLTAAGSRPKVPWVRVRCRLR*SSTRSR
Trigger: ACGCGATCGTGTACTACTTCATCGCAGCCGGCAACG...CACGCGCACCCATGGAACTTTTGGGCGTGAGCCAGCAGCTGTCAAGCCTGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp GAGAGTGACCTCATAGGTGGCAACCAGCTCCCGATTCATGGGGGACTTCACCATCGGGGCTGTAGGCCATaGAGAGGTCGAAGGTGCGCA +
Preference number: 4 (lower is better)
Translates to: ESDLIGGNQLPIHGGLHHRGCRP*RGRRCA
Trigger: TGCGCACCTTCGACCTCTTCATGGCCTACAGCCCCG...ATGGTGAAGTCCCCCATGAATCGGGAGCTGGTTGCCACCTATGAGGTCACTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CCACCTGCACTGAATTTTCGCGACGGTTGCTGGCTACATCCCCAGGGTTGTCTTCGGGGCTGTAGGCCATaGAGAGGTCGAAGGTGCGCA +
Preference number: 4 (lower is better)
Translates to: PPALNFRDGCWLHPQGCLRGCRP*RGRRCA
Trigger: TGCGCACCTTCGACCTCTTCATGGCCTACAGCCCCG...AAGACAACCCTGGGGATGTAGCCAGCAACCGTCGCGAAAATTCAGTGCAGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CCAGCTGCGATTGCTGGAGGCCTTGACGATGAAGGAGAAGATGGCTTCTCGCTCTGGAGAGCAGGTGGATaGACTCCTCCTCGAAGCCGC +
Preference number: 4 (lower is better)
Translates to: PAAIAGGLDDEGEDGFSLWRAGG*TPPRSR
Trigger: GCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCA...GAGCGAGAAGCCATCTTCTCCTTCATCGTCAAGGCCTCCAGCAATCGCAGCTGG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp GCCGATGATGGCCGTGTCGTTGTGGCCTGCCAGGTCTCGGGCCACAATGTCCACTGTAGTACCAGTTCATaGGGACAAAGAGCATGGCGG +
Preference number: 4 (lower is better)
Translates to: ADDGRVVVACQVSGHNVHCSTSS*GQRAWR
Trigger: CCGCCATGCTCTTTGTCCTCATGAACTGGTACTACA...GTGGACATTGTGGCCCGAGACCTGGCAGGCCACAACGACACGGCCATCATCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGCAGCCACAATGGCCTTaGGCTTCCTCTTGTGTACAG +
Preference number: 4 (lower is better)
Translates to: WEGGGPVWPLSAQPEPSWQPQWP*ASSCVQ
Trigger: CTGTACACAAGAGGAAGCTCAAGGCCATTGTGGCTG...CCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CCCGCCGGCTCATTCTCATACACGCTTGTGCTGAACTGGGGCTTGGAGAACTGTGCCACGATTCCCAGCTaGGCCAGCCACAATGGCCTT +
Preference number: 4 (lower is better)
Translates to: PAGSFSYTLVLNWGLENCATIPS*ASHNGL
Trigger: AAGGCCATTGTGGCTGGCTCAGCTGGGAATCGTGGC...ACAGTTCTCCAAGCCCCAGTTCAGCACAAGCGTGTATGAGAATGAGCCGGCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp TGGACGTCCAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGGGCAAAAGTGGGATCTaGGCAGCTGATGCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: WTSSREGCGGNVARLGLEGKSGI*AADAGC
Trigger: GCAGCCCGCATCAGCTGCTCAGATCCCACTTTTGCC...CTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTGGACGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp TGCAGTGTGAGGTCAGCAACCAGGTCGAGGGTTGGGGAGGGTCCACGGGGAGGTGTAGAGGTCAGATGCTaGATGAGCGTCTGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: CSVRSATRSRVGEGPRGGVEVRC*MSVWQK
Trigger: CTTTTGCCAGACGCTCATTCAGCATCTGACCTCTAC...ACCTCCCCGTGGACCCTCCCCAACCCTCGACCTGGTTGCTGACCTCACACTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp AGTGGGGCTCAGGGCTCCTCCCTAGGAATCATGGGGCCTTACCTCCCTCTAGAAGGAGCCAGTCCAGAGTaGTCCAGCTGCAAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: SGAQGSSLGIMGPYLPLEGASPE*SSCKAL
Trigger: AAGGGCTTTGCAGCTGGATCACTCTGGACTGGCTCC...TTCTAGAGGGAGGTAAGGCCCCATGATTCCTAGGGAGGAGCCCTGAGCCCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR TCA 90 bp TCTGCCTTTGAGCTTCTGTCTTGTTGCTGTTGCAGGAGCCATGAGCACAGAGGGTCCCCACCCAGCAACTaGGGCCTCTGGGCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: SAFELLSCCCCRSHEHRGSPPSN*GLWAEV
Trigger: CACCTCTGCCCAGAGGCCTCAGTTGCTGGGTGGGGA...CCCTCTGTGCTCATGGCTCCTGCAACAGCAACAAGACAGAAGCTCAAAGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR TCA 90 bp GGGCACAGGGTGGAACAGGAAGAGGGCCTGAGCTTGGGCCCAGCTCCATCACTGGCCCTTTCCCAAAGATaGTCCTCAGAAGAGCACCTT +
Preference number: 4 (lower is better)
Translates to: GHRVEQEEGLSLGPAPSLALSQR*SSEEHL
Trigger: AAGGTGCTCTTCTGAGGATCATCTTTGGGAAAGGGC...CAGTGATGGAGCTGGGCCCAAGCTCAGGCCCTCTTCCTGTTCCACCCTGTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp CTAAACAGGTGGGAATTCTCAACAGGTCCCCAAGGAAGGATGAGGCCACATTCCGCCAAGCATCGCGCCTaGAGCCCGCGTCCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: LNRWEFSTGPQGRMRPHSAKHRA*SPRPSL
Trigger: GAGAGAGGGACGCGGGCTGCAGGCGCGATGCTTGGC...GGAATGTGGCCTCATCCTTCCTTGGGGACCTGTTGAGAATTCCCACCTGTTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR GCA 90 bp TCAAAACCATCTGCCTCTAAACAGGTGGGAATTCTCAACAGGTCCCCAAGGAAGCCTCGCCTCGGGCTCTaGTCTCCGCCGGATCGGCCC +
Preference number: 4 (lower is better)
Translates to: SKPSASKQVGILNRSPRKPRLGL*SPPDRP
Trigger: GGGCCGATCCGGCGGAGAGCAGAGCCCGAGGCGAGG...CTTCCTTGGGGACCTGTTGAGAATTCCCACCTGTTTAGAGGCAGATGGTTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR GCA 90 bp AAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTCCCCATGGCTCCGTGTaGGTGTGTGCAGCGGCGCCG +
Preference number: 4 (lower is better)
Translates to: KQLGLQVPNTTLGHLKDIPHGSV*VCAAAP
Trigger: CGGCGCCGCTGCACACACGCACACGGAGCCATGGGG...AATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp CTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGAGGAGTAGAGGACGCTaGCCCCTGCCCCCAAGTCGG +
Preference number: 4 (lower is better)
Translates to: LSSSWDYRYLTPHLAISRRSRGR*PLPPSR
Trigger: CCGACTTGGGGGCAGGGGGCAGCGTCCTCTACTCCT...CCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp GAGGTCCCCAGGGAGCCAGTCCAGAGTGATCCAGCTGCAAAGCCCTTGGGAAGACGATGGTGTAGCCAATaGCCCGGGGACGTCCTTTAT +
Preference number: 4 (lower is better)
Translates to: EVPREPVQSDPAAKPLGRRWCSQ*PGDVLY
Trigger: ATAAAGGACGTCCCCGGGGCATTGGCTACACCATCG...TCTTCCCAAGGGCTTTGCAGCTGGATCACTCTGGACTGGCTCCCTGGGGACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR GCA 90 bp GGGCACAGGGTGGAACAGGAAGAGGGCCTGAGCTTGGGCCCAGCTCCATCACTGGCTGCCAAAGGCAGATaGACTGACAATGCTGTAGGT +
Preference number: 4 (lower is better)
Translates to: GHRVEQEEGLSLGPAPSLAAKGR*TDNAVG
Trigger: ACCTACAGCATTGTCAGTGCATCTGCCTTTGGCAGC...CAGTGATGGAGCTGGGCCCAAGCTCAGGCCCTCTTCCTGTTCCACCCTGTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp GATGAGGCCACATTCCTCCAAGTCACTGCTCTGTCACCCAGACTTGGGGCGGGGGTTGATGTAGTAGGGTaGGTCCTTCCACGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: DEATFLQVTALSPRLGAGVDVVG*VLPRGV
Trigger: CACCCCACGTGGAAGGACGCACCCTACTACATCAAC...CCCCGCCCCAAGTCTGGGTGACAGAGCAGTGACTTGGAGGAATGTGGCCTCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR GCA 90 bp GTGGCCATGATGCTGTCCAGTTTAACAGTGCCTTGCCCCCATCCACATTCCCTAGCATGGCGTGGGTGGTaGGGATCTTGCCCGTGGTGC +
Preference number: 4 (lower is better)
Translates to: VAMMLSSLTVPCPHPHSLAWRGW*GSCPWC
Trigger: GCACCACGGGCAAGATCCGCACCACCCACGCCATGC...TAGGGAATGTGGATGGGGGCAAGGCACTGTTAAACTGGACAGCATCATGGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp TTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAAACACTGTGGCACTaGTGGTGGCTTTCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: FGLFQLSLSQAGPQTLGPQTLWH*WWLSEG
Trigger: CCCCTCTGAAAGCCACCAGCAGTGCCACAGTGTTTG...GGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp CTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGAGACCCCCGCCGGGATaGCTTCAAGCACCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: LSSSWDYRYLTPHLAISRRPPPG*LQAPRP
Trigger: TGGCCGAGGTGCTTGAAGGCATCCCGGCGGGGGTCT...CCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp AGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGACCCCCGCCGGGATaGCTTCAAGCACCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: SLSSSWDYRYLTPHLAISRPPPG*LQAPRP
Trigger: TGGCCGAGGTGCTTGAAGGCATCCCGGCGGGGGTCT...TGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp CTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGCTTGGTGGGCGTGCCTaGATCACTGGCCACCACCCG +
Preference number: 4 (lower is better)
Translates to: LSSSWDYRYLTPHLAISRLGGRA*ITGHHP
Trigger: CGGGTGGTGGCCAGTGATGCAGGCACGCCCACCAAG...CCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp TCTGCCTTTGAGCTTCTGTCTTGTTGCTGTTGCAGGAGCCATGAGCACAGAGGGCTTGGTGGGCGTGCCTaGATCACTGGCCACCACCCG +
Preference number: 4 (lower is better)
Translates to: SAFELLSCCCCRSHEHRGLGGRA*ITGHHP
Trigger: CGGGTGGTGGCCAGTGATGCAGGCACGCCCACCAAG...CCCTCTGTGCTCATGGCTCCTGCAACAGCAACAAGACAGAAGCTCAAAGGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp AGGCACCACCAGAGGCTAAAGCCCAACAGTAGAGCCCTGACCTCTTTTCCACCCAGCTCTTGGTGGGCGTaGCTGCATCACTGGCCACCA +
Preference number: 4 (lower is better)
Translates to: RHHQRLKPNSRALTSFPPSSWWA*LHHWPP
Trigger: TGGTGGCCAGTGATGCAGGCACGCCCACCAAGAGCT...GGGTGGAAAAGAGGTCAGGGCTCTACTGTTGGGCTTTAGCCTCTGGTGGTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR GCA 90 bp ATGCGGACAGGCCACCGCCCTCTTGTCTGCATGGCAGATGGGCACAGGGTGGAAGAAGTAGCTGAGCTCTaGATTGAGGCCCACGTCGTT +
Preference number: 4 (lower is better)
Translates to: MRTGHRPLVCMADGHRVEEVAEL*IEAHVV
Trigger: AACGACGTGGGCCTCAATGCAGAGCTCAGCTACTTC...TTCCACCCTGTGCCCATCTGCCATGCAGACAAGAGGGCGGTGGCCTGTCCGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp CCCAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCCCCAGACGGCTGTACTaGTGCTGTGTGAACACGGGG +
Preference number: 4 (lower is better)
Translates to: PSLSSSWDYRYLTPHLAIPRRLY*CCVNTG
Trigger: CCCCGTGTTCACACAGCAGCAGTACAGCCGTCTGGG...GATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp CCCAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCGAGGCATTGGAGAACTaGACGGCCTCGTCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: PSLSSSWDYRYLTPHLAIEALEN*TASSSS
Trigger: CGAGCTGGACGAGGCCGTGCAGTTCTCCAATGCCTC...GATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp CAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTGGCAATGACCTTCCCTaGCGAGGAGTCCTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: QQRGMWRKCSETWTGVGCGNDLP*RGVLQL
Trigger: CAGCTGGAGGACTCCTCGGCAGGGAAGGTCATTGCC...ACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp ACGGTCGGGGATCTCGTTAATGACGATCTTGACGCGCTGGTCGTCCCTCAGGATGGCAATGACCTTCCCTaGCGAGGAGTCCTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: TVGDLVNDDLDALVVPQDGNDLP*RGVLQL
Trigger: CAGCTGGAGGACTCCTCGGCAGGGAAGGTCATTGCC...ATCCTGAGGGACGACCAGCGCGTCAAGATCGTCATTAACGAGATCCCCGACCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGACTTGGATCACCACCTaGACTGAATTTTCGCGACGG +
Preference number: 4 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQTWITT*TEFSRR
Trigger: CCGTCGCGAAAATTCAGTGCAGGTGGTGATCCAAGT...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp TGGATAAGCAGTTCTGTCTGCGCAAAGTTCACCCGGCCCTTCTTGTCCACATGGCGTTGCCCACGAGGGTaGCGCGTGGTGAGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: WISSSVCAKFTRPFLSTWRCPRG*RVVSAQ
Trigger: CTGAGCACTCACCACGCGGCACCCTCGTGGGCAACG...CCATGTGGACAAGAAGGGCCGGGTGAACTTTGCGCAGACAGAACTGCTTATCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp TCATCAGGCTTGACAGCTGCTGGCTCACGCCCAAAAGTTCCATGGGTGCGCGTGCTCATCTGCATCCACTaGGCCTGTCACGTTGCCCAC +
Preference number: 4 (lower is better)
Translates to: SSGLTAAGSRPKVPWVRVLICIH*ACHVAH
Trigger: GTGGGCAACGTGACAGGCGCAGTGGATGCAGATGAG...CACGCGCACCCATGGAACTTTTGGGCGTGAGCCAGCAGCTGTCAAGCCTGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp TGGTCGTTGATGTCCTCTAGCACAACGCGCACCTCCTGCAGTGTGAGGTCAGCAGTTGGGGCCCTCATCTaGATCCACTGCGCCTGTCAC +
Preference number: 4 (lower is better)
Translates to: WSLMSSSTTRTSCSVRSAVGALI*IHCACH
Trigger: GTGACAGGCGCAGTGGATGCAGATGAGGGCCCCAAC...TGCTGACCTCACACTGCAGGAGGTGCGCGTTGTGCTAGAGGACATCAACGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp CCGCAGGTAATCCTCCAGGACCACCTTCAGCAGCGAGCCCTTGATTGGCCCCTCATAAGCAGTTCTGTCTaGGCAAAGTTCACCCGGCCC +
Preference number: 4 (lower is better)
Translates to: PQVILQDHLQQRALDWPLISSSV*AKFTRP
Trigger: GGGCCGGGTGAACTTTGCGCAGACAGAACTGCTTAT...GAGGGGCCAATCAAGGGCTCGCTGCTGAAGGTGGTCCTGGAGGATTACCTGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642965.1
CDS-3UTR GCA 90 bp CTGAGGCTCTGGCAAGAAGAAAAGGTAGCAAAGTGGGCAAGGGAGGAGTGGAGGCGGCTGCATTCAGTCTaGAAAGGCTGGGCCACGGCC +
Preference number: 4 (lower is better)
Translates to: LRLWQEEKVAKWAREEWRRLHSV*KGWATA
Trigger: GGCCGTGGCCCAGCCTTTGCAGACTGAATGCAGCCG...CCTCCACTCCTCCCTTGCCCACTTTGCTACCTTTTCTTCTTGCCAGAGCCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642965.1
CDS-3UTR GCA 90 bp ATGCGGACAGGCCACCGCCCTCTTGTCTGCATGGCAGATGGGCACAGGGTGGAAGGGAGAACTCAGGGCTaGCCTATATTAACTCGCTGG +
Preference number: 4 (lower is better)
Translates to: MRTGHRPLVCMADGHRVEGRTQG*PILTRW
Trigger: CCAGCGAGTTAATATAGGGCAGCCCTGAGTTCTCCC...TTCCACCCTGTGCCCATCTGCCATGCAGACAAGAGGGCGGTGGCCTGTCCGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp AAAAACATGGCAAGGACCCAACTAAACACACCCGTGGGCCCCCAGTTTGCAGCTCAGCGCAGTGTGCAGTaGCCTCTGGGAGCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: KNMARTQLNTPVGPQFAAQRSVQ*PLGAGS
Trigger: GGAGCCAGCTCCCAGAGGGCACTGCACACTGCGCTG...AGCTGCAAACTGGGGGCCCACGGGTGTGTTTAGTTGGGTCCTTGCCATGTTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp ACCCGTGGGCCCCCAGTTTGCAGCTTTGGTATTAGATTACTGCTAGGGACCCTGCCCTGTGGGAGCAGCTaGCTCCCTCCTGGTGGAACA +
Preference number: 4 (lower is better)
Translates to: TRGPPVCSFGIRLLLGTLPCGSS*LPPGGT
Trigger: TGTTCCACCAGGAGGGAGGCAGCTGCTCCCACAGGG...CAGGGTCCCTAGCAGTAATCTAATACCAAAGCTGCAAACTGGGGGCCCACGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp ATTGATTTGAAAATGCGGACAGGCCACCGCCCTCTTGTCTGCATGGCAGATGGGCCAGCATCTGCCTGGTaGCCTGTGGGAGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: IDLKMRTGHRPLVCMADGPASAW*PVGAAA
Trigger: GGCAGCTGCTCCCACAGGGCACCAGGCAGATGCTGG...CCCATCTGCCATGCAGACAAGAGGGCGGTGGCCTGTCCGCATTTTCAAATCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp CATCCACATTCCCTAGGTAAGTCTTCCCTATACCCGCTGCCCTGGGTCCAGCTGTCGCCACAGAAGCCTTaGCCTCCAGGTGCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: HPHSLGKSSLYPLPWVQLSPQKP*PPGAKA
Trigger: GGCTTTGGCACCTGGAGGGCAAGGCTTCTGTGGCGA...CAGCTGGACCCAGGGCAGCGGGTATAGGGAAGACTTACCTAGGGAATGTGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp TCTACCTGTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAAGACTCGCCACAGAAGCCTTaGCCTCCAGGTGCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: STCRSSCFRDRCCRLQEDSPQKP*PPGAKA
Trigger: GGCTTTGGCACCTGGAGGGCAAGGCTTCTGTGGCGA...GTCTTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp CATCCACATTCCCTAGGTAAGTCTTCCCTATACCCGCTGCCCTGGGTCCAGCTGACCGGTGCTGCAGGCTaGAGGAAGACAGTGGCCCAA +
Preference number: 4 (lower is better)
Translates to: HPHSLGKSSLYPLPWVQLTGAAG*RKTVAQ
Trigger: TTGGGCCACTGTCTTCCTGCAGCCTGCAGCACCGGT...CAGCTGGACCCAGGGCAGCGGGTATAGGGAAGACTTACCTAGGGAATGTGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp TCAAAACCATCTGCCTCTAAACAGGTGGGAATTCTCAACAGGTCCCCAAGGAAGGCCGGGGGCTCGGACTaGGCGCGCCCCAAACGTCCA +
Preference number: 4 (lower is better)
Translates to: SKPSASKQVGILNRSPRKAGGSD*ARPKRP
Trigger: TGGACGTTTGGGGCGCGCCCAGTCCGAGCCCCCGGC...CTTCCTTGGGGACCTGTTGAGAATTCCCACCTGTTTAGAGGCAGATGGTTTTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp GGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGATCTGAGCAGCTGATGCGGCAGCTGGTGGCAACATaGCGCCCCATGGCTCCGTGT +
Preference number: 4 (lower is better)
Translates to: GQMLNERLAKVGSEQLMRQLVAT*RPMAPC
Trigger: ACACGGAGCCATGGGGCGCCATGTTGCCACCAGCTG...CCGCATCAGCTGCTCAGATCCCACTTTTGCCAGACGCTCATTCAGCATCTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp AGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCACCACGTGGCAGCTGGTaGCAACATGGCGCCCCATGG +
Preference number: 4 (lower is better)
Translates to: SLSSSWDYRYLTPHLAISPRGSW*QHGAPW
Trigger: CCATGGGGCGCCATGTTGCCACCAGCTGCCACGTGG...TGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp AGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGCCACGTGGCAGCTaGTGGCAACATGGCGCCCCA +
Preference number: 4 (lower is better)
Translates to: SLSSSWDYRYLTPHLAISRPRGS*WQHGAP
Trigger: TGGGGCGCCATGTTGCCACCAGCTGCCACGTGGCCT...TGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp CTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGAGGCCACGTGGCAGCTaGTGGCAACATGGCGCCCCA +
Preference number: 4 (lower is better)
Translates to: LSSSWDYRYLTPHLAISRRPRGS*WQHGAP
Trigger: TGGGGCGCCATGTTGCCACCAGCTGCCACGTGGCCT...CCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp GGGAGTGGGGCTCAGGGCTCCTCCCTAGGAATCATGGGGCCTTACCTCCCTCTATCTTGGGCCAGCAACTaGGTCACAGAAGAACCCACA +
Preference number: 4 (lower is better)
Translates to: GSGAQGSSLGIMGPYLPLSWASN*VTEEPT
Trigger: TGTGGGTTCTTCTGTGACCCAGTTGCTGGCCCAAGA...TAGAGGGAGGTAAGGCCCCATGATTCCTAGGGAGGAGCCCTGAGCCCCACTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp CCTAGGTCTACCTGTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGCCAAGTTGGCCAGGGTaGACAGAGGCCTGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: PRSTCRSSCFRDRCCRLQPSWPG*TEAWSC
Trigger: ACAAGACCAGGCCTCTGTCCACCCTGGCCAACTTGG...CTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGACCTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp TCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGACGTCCTTTATCCTaGTCTATGGCGGTGATGATG +
Preference number: 4 (lower is better)
Translates to: SEQLMRAARAKPRLSPRPGRPLS*SMAVMM
Trigger: CATCATCACCGCCATAGACCAGGATAAAGGACGTCC...AGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGCGTAGTCCAGTGGGATaGCCACCCGAATACGAATGT +
Preference number: 4 (lower is better)
Translates to: WEGGGPVWPLSAQPEPSWRSPVG*PPEYEC
Trigger: ACATTCGTATTCGGGTGGCCATCCCACTGGACTACG...CCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTCCGGCCAGCTCCTTCCACGTGGGGTaGTTGTCATTGATGTCCAGG +
Preference number: 4 (lower is better)
Translates to: GMWRKCSETWTGVGCPASSFHVG*LSLMSR
Trigger: CCTGGACATCAATGACAACCACCCCACGTGGAAGGA...GCTGGCCGGACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GGGCACAGGGTGGAACAGGAAGAGGGCCTGAGCTTGGGCCCAGCTCCATCACTGGTAGAACTTGTTGGGTaGCTGGATGCTGTACACCAG +
Preference number: 4 (lower is better)
Translates to: GHRVEQEEGLSLGPAPSLVELVG*LDAVHQ
Trigger: CTGGTGTACAGCATCCAGCCACCCAACAAGTTCTAC...CAGTGATGGAGCTGGGCCCAAGCTCAGGCCCTCTTCCTGTTCCACCCTGTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp GGGCACAGGGTGGAACAGGAAGAGGGCCTGAGCTTGGGCCCAGCTCCATCACTGGGCTGTAGAACTTGTTaGGTGGCTGGATGCTGTACA +
Preference number: 4 (lower is better)
Translates to: GHRVEQEEGLSLGPAPSLGCRTC*VAGCCT
Trigger: TGTACAGCATCCAGCCACCCAACAAGTTCTACAGCC...CAGTGATGGAGCTGGGCCCAAGCTCAGGCCCTCTTCCTGTTCCACCCTGTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGCCAGCATGGCGTGGGTaGTGCGGATCTTGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: LSSSWDYRYLTPHLAISRPAWRG*CGSCPW
Trigger: CCACGGGCAAGATCCGCACCACCCACGCCATGCTGG...CCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp AACAGGTCCCCAAGGAAGGATGAGGCCACATTCCTCCAAGTCACTGCTCTGTCACGGTCCAGCATGGCGTaGGTGGTGCGGATCTTGCCC +
Preference number: 4 (lower is better)
Translates to: NRSPRKDEATFLQVTALSRSSMA*VVRILP
Trigger: GGGCAAGATCCGCACCACCCACGCCATGCTGGACCG...TGACAGAGCAGTGACTTGGAGGAATGTGGCCTCATCCTTCCTTGGGGACCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp CTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGCGGTCCAGCATGGCGTaGGTGGTGCGGATCTTGCCC +
Preference number: 4 (lower is better)
Translates to: LSSSWDYRYLTPHLAISRRSSMA*VVRILP
Trigger: GGGCAAGATCCGCACCACCCACGCCATGCTGGACCG...CCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp AGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCACGGTCCAGCATGGCGTaGGTGGTGCGGATCTTGCCC +
Preference number: 4 (lower is better)
Translates to: SLSSSWDYRYLTPHLAISRSSMA*VVRILP
Trigger: GGGCAAGATCCGCACCACCCACGCCATGCTGGACCG...TGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp CTCCAGGTGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTATCAGCTCGGCCTCATaGGGGTCGGGGTTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: LQVPKPSMEKLPNGKGSLISSAS*GSGFSR
Trigger: CCGGGAGAACCCCGACCCCCATGAGGCCGAGCTGAT...AAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCACCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp AGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAATCAGCTCGGCCTCATaGGGGTCGGGGTTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: SLSSSWDYRYLTPHLAISISSAS*GSGFSR
Trigger: CCGGGAGAACCCCGACCCCCATGAGGCCGAGCTGAT...TGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp CAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCCTGTGGCACTGCTGGTaGCTTTCAGAGGGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: QPLKQLGLQVPNTTLGHLLWHCW*LSEGAC
Trigger: GCAGGCCCCCTCTGAAAGCCACCAGCAGTGCCACAG...GAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp CCCAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTGGTGGAGCTCTTGGTaGGCGTGCCTGCATCACTGG +
Preference number: 4 (lower is better)
Translates to: PSLSSSWDYRYLTPHLAIWWSSW*ACLHHW
Trigger: CCAGTGATGCAGGCACGCCCACCAAGAGCTCCACCA...GATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp CCCAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTGCTGGTGGAGCTCTTaGTGGGCGTGCCTGCATCAC +
Preference number: 4 (lower is better)
Translates to: PSLSSSWDYRYLTPHLAICWWSS*WACLHH
Trigger: GTGATGCAGGCACGCCCACCAAGAGCTCCACCAGCA...GATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp CCCAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCCGGCCGGGAAGAAGGTaGGCGTCTCGTCGTTCACAT +
Preference number: 4 (lower is better)
Translates to: PSLSSSWDYRYLTPHLAIRPGRR*ASRRSH
Trigger: ATGTGAACGACGAGACGCCCACCTTCTTCCCGGCCG...GATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp AGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAGCATGTAGGCGGCTGTaGTCTCCCGGTCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: SLSSSWDYRYLTPHLAISACRRL*SPGPGP
Trigger: TGGGCCTGGACCGGGAGACCACAGCCGCCTACATGC...TGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp CCCAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTTGAAGGGCGGGGCCTaGTCAGTGGCCGACACATTC +
Preference number: 4 (lower is better)
Translates to: PSLSSSWDYRYLTPHLAILKGGA*SVADTF
Trigger: GAATGTGTCGGCCACTGACCAGGCCCCGCCCTTCAA...GATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCTTAGTGAAGAGGGGGTaGTTGTCATTCTCATCAGAA +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSLVKRG*LSFSSE
Trigger: TTCTGATGAGAATGACAACCACCCCCTCTTCACTAA...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGAGTCAGCTTGGCATTTaGCACACTGACAGAGCGCTC +
Preference number: 4 (lower is better)
Translates to: WEGGGPVWPLSAQPEPSWSQLGI*HTDRAL
Trigger: GAGCGCTCTGTCAGTGTGCCAAATGCCAAGCTGACT...CCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GGATCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCAAAGGGCTTGAACTaGGGCGTATTGTCATTGACG +
Preference number: 4 (lower is better)
Translates to: GSEQLMRAARAKPRLSPRPKGLN*GVLSLT
Trigger: CGTCAATGACAATACGCCCCAGTTCAAGCCCTTTGG...CCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCGGGCTTGGAGAACTGTaGCCGGCAGTCATTGACATC +
Preference number: 4 (lower is better)
Translates to: FGLFQLSLSQAGPQTLGPGLGEL*PAVIDI
Trigger: GATGTCAATGACTGCCGGCCACAGTTCTCCAAGCCC...GGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GGATCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGAGGTCAACTCTCCATTaGGACCTTCATCCTGGTCAG +
Preference number: 4 (lower is better)
Translates to: GSEQLMRAARAKPRLSPRRSTLH*DLHPGQ
Trigger: CTGACCAGGATGAAGGTCCCAATGGAGAGTTGACCT...CCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GGGGTGTGGATTTGGCGGATTCTGTGCGGGCGTTGCGCTCGAAGGCAGTGGCCTAGGTCAACTCTCCATTaGGACCTTCATCCTGGTCAG +
Preference number: 4 (lower is better)
Translates to: GVWIWRILCGRCARRQWPRSTLH*DLHPGQ
Trigger: CTGACCAGGATGAAGGTCCCAATGGAGAGTTGACCT...AGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAATCCACACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGATCTCCTCTCTGATGTaGAGGATGGTGCCGTTGGGT +
Preference number: 4 (lower is better)
Translates to: WEGGGPVWPLSAQPEPSWISSLM*RMVPLG
Trigger: ACCCAACGGCACCATCCTCCACATCAGAGAGGAGAT...CCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp AGCACTTGGATCACCACCTGCACTGAATTTTCGCGACGGTTGCTGGCTACATCCTCGTATGGCACTGGCTaGCCCAGGTCGCTGGCCACC +
Preference number: 4 (lower is better)
Translates to: STWITTCTEFSRRLLATSSYGTG*PRSLAT
Trigger: GGTGGCCAGCGACCTGGGCCAGCCAGTGCCATACGA...GGATGTAGCCAGCAACCGTCGCGAAAATTCAGTGCAGGTGGTGATCCAAGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GAAGCCGCGCACACGGTCGGGGATCTCGTTAATGACGATCTTGACGCGCTGGTCAGTACACGATCGCGTTaGGGCCCTCATCTGCATCCA +
Preference number: 4 (lower is better)
Translates to: EAAHTVGDLVNDDLDALVSTRSR*GPHLHP
Trigger: TGGATGCAGATGAGGGCCCCAACGCGATCGTGTACT...GACCAGCGCGTCAAGATCGTCATTAACGAGATCCCCGACCGTGTGCGCGGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CATCTGCATCCACTGCGCCTGTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGTCCCGGAAGTAGTGGATaGCCAGAATGCTGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: HLHPLRLSRCPRGCRVVSPGSSG*PECCRR
Trigger: TCTTCTACAGCATTCTGGCCATCCACTACTTCCGGG...ACTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCAGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACCCCTTCTTGTCCACATaGAACTGCACATTGTCAGTA +
Preference number: 4 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHPFLST*NCTLSV
Trigger: TACTGACAATGTGCAGTTCCATGTGGACAAGAAGGG...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTCGCCCAAAAGTTCCATaGGTGCGCGTGGGGCTGTTC +
Preference number: 4 (lower is better)
Translates to: QQRGMWRKCSETWTGVGCRPKVP*VRVGLF
Trigger: GAACAGCCCCACGCGCACCCATGGAACTTTTGGGCG...ACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGGTTTGTGCAGGGGTGTaGATTTGGCGGATTCTGTGC +
Preference number: 4 (lower is better)
Translates to: WEGGGPVWPLSAQPEPSWVCAGV*IWRILC
Trigger: GCACAGAATCCGCCAAATCCACACCCCTGCACAAAC...CCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CTCATACACGCTTGTGCTGAACTGGGGCTTGGAGAACTGTGGCCGGCAGTCATTCAGCCTGAGCCAAGCTaGTCCCCAGACTCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: LIHACAELGLGELWPAVIQPEPS*SPDSWA
Trigger: GGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTG...AATGACTGCCGGCCACAGTTCTCCAAGCCCCAGTTCAGCACAAGCGTGTATGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGATCTGAGCAGCTGATGCGGCTTAGCCGGAGGGGATaGTGCTTGCGGGGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: GQMLNERLAKVGSEQLMRLSRRG*CLRGGA
Trigger: AGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAG...CCGCATCAGCTGCTCAGATCCCACTTTTGCCAGACGCTCATTCAGCATCTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp TGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCACCTGGACAGGGGATGTCCGCGCTaGGCCTCCCTTGCGCCTGCT +
Preference number: 4 (lower is better)
Translates to: CSLTLTFLSTWGCHLHLDRGCPR*ASLAPA
Trigger: AGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCT...GTCCAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCGGGAAGCCAGTGAAATaGAGAGAATGCTTGTTCATT +
Preference number: 4 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPGKPVK*RECLFI
Trigger: AATGAACAAGCATTCTCTCCATTTCACTGGCTTCCC...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp CCGGTCCAGAGAAGACAGCACATAGATGTCACCCGTGGTGGGGTTGATGGCAAATCAGTCTGCAAAGGCTaGGCCACGGCCTTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: PVQRRQHIDVTRGGVDGKSVCKG*ATALAQ
Trigger: CTGGGCCAAGGCCGTGGCCCAGCCTTTGCAGACTGA...TTTGCCATCAACCCCACCACGGGTGACATCTATGTGCTGTCTTCTCTGGACCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GCTGCCCAGCTCCTGTCCCAGTCAGCTGGCCAGGATCCCACCACAAAGCTGCCCTTACCAAGAGGACCTTaGAGAAGTCATCCTGAGACG +
Preference number: 4 (lower is better)
Translates to: AAQLLSQSAGQDPTTKLPLPRGP*RSHPET
Trigger: CGTCTCAGGATGACTTCTCCAAGGTCCTCTTGGTAA...GGGCAGCTTTGTGGTGGGATCCTGGCCAGCTGACTGGGACAGGAGCTGGGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp GTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAAGACAGTGGCCGGTGCTGTGACAGAGTaGCAAGAGGCAGGGCATTTC +
Preference number: 4 (lower is better)
Translates to: VDPPASETGAAGCRKTVAGAVTE*QEAGHF
Trigger: GAAATGCCCTGCCTCTTGCCACTCTGTCACAGCACC...GGCCACTGTCTTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp TCTACCTGTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAAGACGGTCATCTGGGCCTTTaGCCTGAGGCTCCACAGGGT +
Preference number: 4 (lower is better)
Translates to: STCRSSCFRDRCCRLQEDGHLGL*PEAPQG
Trigger: ACCCTGTGGAGCCTCAGGCCAAAGGCCCAGATGACC...GTCTTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp AGAAGGAAAAGTCCAGGAGGGGGAGGGCTCTCAATTGGGTTTCAGGCACCAGGCGCCCTCTTGTCTGCATaGCAGATGGGCACAGGGTGG +
Preference number: 4 (lower is better)
Translates to: RRKSPGGGGLSIGFQAPGALLSA*QMGTGW
Trigger: CCACCCTGTGCCCATCTGCCATGCAGACAAGAGGGC...GCCTGGTGCCTGAAACCCAATTGAGAGCCCTCCCCCTCCTGGACTTTTCCTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp CTGGTCAGTGGCCATCATGGTGATGACCGAGGTGCCCGCCGGCTCATTCTCATAGAAGCCCATTTGGAGTaGAGAGCTCAGGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LVSGHHGDDRGARRLILIEAHLE*RAQGLR
Trigger: CCTCAGCCCCTGAGCTCTCCACTCCAAATGGGCTTC...TATGAGAATGAGCCGGCGGGCACCTCGGTCATCACCATGATGGCCACTGACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642965.1
CDS-3UTR TCA 90 bp AGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTATGCCCAGGCCGGGCTaGCTAGCCCCGACCACCTCA +
Preference number: 4 (lower is better)
Translates to: SSWDYRYLTPHLAISRTFMPRPG*LAPTTS
Trigger: TGAGGTGGTCGGGGCTAGTCAGCCCGGCCTGGGCAT...AAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp GATGAGGCCACATTCCTCCAAGTCACTGCTCTGTCACCCAGACTTGGGGCGGGGCAGGCGTGTCCTCGCTaGTCAGCAGGTATGTATCAA +
Preference number: 4 (lower is better)
Translates to: DEATFLQVTALSPRLGAGQACPR*SAGMYQ
Trigger: TTGATACATACCTGCTGATCAGCGAGGACACGCCTG...CCCCGCCCCAAGTCTGGGTGACAGAGCAGTGACTTGGAGGAATGTGGCCTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR TCA 90 bp TGGACGTCCAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGCTGTGGCATTCACGATaGAGATGGGCGTCCCCACTG +
Preference number: 4 (lower is better)
Translates to: WTSSREGCGGNVARLGLELWHSR*RWASPL
Trigger: CAGTGGGGACGCCCATCTTCATCGTGAATGCCACAG...CTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTGGACGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp CCTAGGTCTACCTGTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGAGCCCTCGTACAGGCTaGTGTCGAAGTAGCTGCCAA +
Preference number: 4 (lower is better)
Translates to: PRSTCRSSCFRDRCCRLQSPRTG*CRSSCQ
Trigger: TTGGCAGCTACTTCGACATCAGCCTGTACGAGGGCT...CTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGACCTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp CTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGCCCCTGAGCGGGCATTaGTCCGAAACTGGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: LSSSWDYRYLTPHLAISRPLSGH*SETGWS
Trigger: GCTCCACCCAGTTTCGGATCAATGCCCGCTCAGGGG...CCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp CAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCGCAGAGACGTGGTGGTaGTTTCCCCTGAGCGGGCAT +
Preference number: 4 (lower is better)
Translates to: QPLKQLGLQVPNTTLGHLAETWW*FPLSGH
Trigger: ATGCCCGCTCAGGGGAAATCACCACCACGTCTCTGC...GAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp GTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAAGACAGTGGCCTCATCTCCACCAGGTTaGTGTAGTAGGGTGCGTCCT +
Preference number: 4 (lower is better)
Translates to: VDPPASETGAAGCRKTVASSPPG*CSRVRP
Trigger: AGGACGCACCCTACTACATCAACCTGGTGGAGATGA...GGCCACTGTCTTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp CAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCCCAGCACATGGATGGTaGGCGTGCTGGTGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: QPLKQLGLQVPNTTLGHLPAHGW*ACWWSS
Trigger: AGAGCTCCACCAGCACGCTCACCATCCATGTGCTGG...GAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp CAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCCGCGGTAACCCACGCTaGACTTCCCATCCACGTTGC +
Preference number: 4 (lower is better)
Translates to: QPLKQLGLQVPNTTLGHLRGNPR*TSHPRC
Trigger: GCAACGTGGATGGGAAGTTCAGCGTGGGTTACCGCG...GAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp GTGGCCATGATGCTGTCCAGTTTAACAGTGCCTTGCCCCCATCCACATTCCCTACGATGGCCTCCAGGATaGGCATGTAGGCGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: VAMMLSSLTVPCPHPHSLRWPPG*ACRRLW
Trigger: CCACAGCCGCCTACATGCTCATCCTGGAGGCCATCG...TAGGGAATGTGGATGGGGGCAAGGCACTGTTAAACTGGACAGCATCATGGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp CATCCACATTCCCTAGGTAAGTCTTCCCTATACCCGCTGCCCTGGGTCCAGCTGTCACATCCAGGACAGTaGCGAACACGGTGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: HPHSLGKSSLYPLPWVQLSHPGQ*RTRWLC
Trigger: GCACAGCCACCGTGTTCGTCACTGTCCTGGATGTGA...CAGCTGGACCCAGGGCAGCGGGTATAGGGAAGACTTACCTAGGGAATGTGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp TGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCACCTGGACTGCAGAAGCCCTGGTTaGAGGGCGGGGCCTGGTCAG +
Preference number: 4 (lower is better)
Translates to: CSLTLTFLSTWGCHLHLDCRSPG*RAGPGQ
Trigger: CTGACCAGGCCCCGCCCTTCAACCAGGGCTTCTGCA...GTCCAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp TGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCACCTGGACCCAGCATTGTGGAGCTaGGTGGGGGCATCCCCCGGT +
Preference number: 4 (lower is better)
Translates to: CSLTLTFLSTWGCHLHLDPALWS*VGASPG
Trigger: ACCGGGGGATGCCCCCACTCAGCTCCACAATGCTGG...GTCCAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp CATCCAGGGCCAGCACCTGGATCAACTCTGAGCCCACCTTGGCGTCGGTGGCCATGGGGTTGTTGTCATTaGTGTCCACGATTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: HPGPAPGSTLSPPWRRWPWGCCH*CPRFPG
Trigger: ACCTGGAAATCGTGGACATCAATGACAACAACCCCA...TGGCCACCGACGCCAAGGTGGGCTCAGAGTTGATCCAGGTGCTGGCCCTGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CATCTGCATCCACTGCGCCTGTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGTTGGGGTTGTTGTCATTaGTGTCCACGATTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: HLHPLRLSRCPRGCRVVSWGCCH*CPRFPG
Trigger: ACCTGGAAATCGTGGACATCAATGACAACAACCCCA...ACTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CTCGTAGTCCACTGTCCGGTTGGCAATGACCTTCCCTGCCGAGGAGTCCTCCAGGAGTGCAAAGTTGCCTaGGTCAGCATCAGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: LVVHCPVGNDLPCRGVLQECKVA*VSISGS
Trigger: ACTGCCACTGATGCTGACTCAGGCAACTTTGCACTC...CTGGAGGACTCCTCGGCAGGGAAGGTCATTGCCAACCGGACAGTGGACTACGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTCACCCGTGGTGGGGTTaGTGGCAAACTTGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: QQRGMWRKCSETWTGVGCHPWWG*WQTCSL
Trigger: GAGAGAGCAAGTTTGCCATCAACCCCACCACGGGTG...ACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp TTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCGATCACCACCTGCACTaGATTTTCGCGACGGTTGCT +
Preference number: 4 (lower is better)
Translates to: FGLFQLSLSQAGPQTLGPDHHLH*IFATVA
Trigger: AGCAACCGTCGCGAAAATTCAGTGCAGGTGGTGATC...GGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CTCGTAGTCCACTGTCCGGTTGGCAATGACCTTCCCTGCCGAGGAGTCCTCCAGCATACACGCTTGTGCTaGACTGGGGCTTGGAGAACT +
Preference number: 4 (lower is better)
Translates to: LVVHCPVGNDLPCRGVLQHTRLC*TGAWRT
Trigger: AGTTCTCCAAGCCCCAGTTCAGCACAAGCGTGTATG...CTGGAGGACTCCTCGGCAGGGAAGGTCATTGCCAACCGGACAGTGGACTACGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp ACGGTCGGGGATCTCGTTAATGACGATCTTGACGCGCTGGTCGTCCCTCAGGATTTGGCCCCTCACGAATaGTCTGGCCCAGCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: TVGDLVNDDLDALVVPQDLAPHE*SGPAWQ
Trigger: TTGCCAAGCTGGGCCAGATCATTCGTGAGGGGCCAA...ATCCTGAGGGACGACCAGCGCGTCAAGATCGTCATTAACGAGATCCCCGACCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp TTGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCGCGCACACGGTCGGGGATCGTGCAAAGAGCTTTTTaGGCCGCAGGTAATCCTCCA +
Preference number: 4 (lower is better)
Translates to: LESRWMNSSSKPRTRSGIVQRAF*AAGNPP
Trigger: TGGAGGATTACCTGCGGCTCAAAAAGCTCTTTGCAC...GATCCCCGACCGTGTGCGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642965.1
CDS-3UTR TCA 90 bp CCGGTCCAGAGAAGACAGCACATAGATGTCACCCGTGGTGGGGTTGATGGCAAAGGCAAAAGTGGGATCTaGGCAGCTGATGCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: PVQRRQHIDVTRGGVDGKGKSGI*AADAGC
Trigger: GCAGCCCGCATCAGCTGCTCAGATCCCACTTTTGCC...TTTGCCATCAACCCCACCACGGGTGACATCTATGTGCTGTCTTCTCTGGACCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp TCCACAAACATGCCCCCACATCCCCCTAGGTCTACCTGTAGATCCTCCTGCTTCCGGCCAAGGGCTCTGTaGAAGCAGCTCTGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: STNMPPHPPRSTCRSSCFRPRAL*KQLCSG
Trigger: CCCAGAACAGAGCTGCTTTCACAGAGCCCTTGGCCG...GAAGCAGGAGGATCTACAGGTAGACCTAGGGGGATGTGGGGGCATGTTTGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR TCA 90 bp GGGCATTTCCAGCAGCTGGAGGTGATGCCACCTGGACTCGGAGGAGGACAGCTCTTGGAGAAGTCATCCTaGGACGCTGCATTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: GHFQQLEVMPPGLGGGQLLEKSS*DAAFLP
Trigger: AGGGAGAAATGCAGCGTCTCAGGATGACTTCTCCAA...GAGCTGTCCTCCTCCGAGTCCAGGTGGCATCACCTCCAGCTGCTGGAAATGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR TCA 90 bp CATCCACATTCCCTAGGTAAGTCTTCCCTATACCCGCTGCCCTGGGTCCAGCTGGTCAGGTCCCAAATTTaGAGGGTGGGCAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: HPHSLGKSSLYPLPWVQLVRSQI*RVGRGR
Trigger: CCTCCCTCTGCCCACCCTTCAAATTTGGGACCTGAC...CAGCTGGACCCAGGGCAGCGGGTATAGGGAAGACTTACCTAGGGAATGTGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR TCA 90 bp ATTGATTTGAAAATGCGGACAGGCCACCGCCCTCTTGTCTGCATGGCAGATGGGTCCAGCAGCTGGAGGTaGTGCCACCTGGACTCGGAG +
Preference number: 4 (lower is better)
Translates to: IDLKMRTGHRPLVCMADGSSSWR*CHLDSE
Trigger: CTCCGAGTCCAGGTGGCATCACCTCCAGCTGCTGGA...CCCATCTGCCATGCAGACAAGAGGGCGGTGGCCTGTCCGCATTTTCAAATCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR TCA 90 bp AGGACCCAACTAAACACACCCGTGGGCCCCCAGTTTGCAGCTTTGGTATTAGATCCAGGGCGGGTGCTGTaGCAGAGTGGCAAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: RTQLNTPVGPQFAALVLDPGRVL*QSGKRQ
Trigger: CTGCCTCTTGCCACTCTGTCACAGCACCCGCCCTGG...ATCTAATACCAAAGCTGCAAACTGGGGGCCCACGGGTGTGTTTAGTTGGGTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp AACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAACCTCGCCTCGGGCTCTaGTCTCCGCCGGATCGGCCC +
Preference number: 4 (lower is better)
Translates to: NRREHQSLLFISWAHIWEPRLGL*SPPDRP
Trigger: GGGCCGATCCGGCGGAGAGCAGAGCCCGAGGCGAGG...TTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp AGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATCTCCGTGTGCGTGTGTaGAGCGGCGCCGCGCCTCGC +
Preference number: 4 (lower is better)
Translates to: SWDYRYLTPHLAISRTFYLRVRV*SGAAPR
Trigger: GCGAGGCGCGGCGCCGCTGCACACACGCACACGGAG...ATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp GGAGATCAAAACCATCTGCCTCTAAACAGGTGGGAATTCTCAACAGGTCCCCAACCCCATGGCTCCGTGTaGGTGTGTGCAGCGGCGCCG +
Preference number: 4 (lower is better)
Translates to: GDQNHLPLNRWEFSTGPQPHGSV*VCAAAP
Trigger: CGGCGCCGCTGCACACACGCACACGGAGCCATGGGG...TTGGGGACCTGTTGAGAATTCCCACCTGTTTAGAGGCAGATGGTTTTGATCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR GCA 90 bp AGGATGAGGCCACATTCCTCCAAGTCACTGCTCTGTCACCCAGACTTGGGGCGGAGTGTCAGGCTCCACTaGAAAGAAGCGAGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: RMRPHSSKSLLCHPDLGRSVRLH*KEARGL
Trigger: GAGGCCTCTCGCTTCTTTGCAGTGGAGCCTGACACT...CCGCCCCAAGTCTGGGTGACAGAGCAGTGACTTGGAGGAATGTGGCCTCATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR GCA 90 bp AATCATGGGGCCTTACCTCCCTCTAGAATGAACCTTGGTAGATGCTCCCCGTCCTCTCTGTCCAGTGGCTaGCGGAGCCACACCACGCCA +
Preference number: 4 (lower is better)
Translates to: NHGALPPSRMNLGRCSPSSLSSG*RSHTTP
Trigger: TGGCGTGGTGTGGCTCCGGCAGCCACTGGACAGAGA...GGACGGGGAGCATCTACCAAGGTTCATTCTAGAGGGAGGTAAGGCCCCATGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR GCA 90 bp AGGTCCCCAGGGAGCCAGTCCAGAGTGATCCAGCTGCAAAGCCCTTGGGAAGAGGTGTATTCTCAGGGATaGGGACGCTGTAGGGCTGAT +
Preference number: 4 (lower is better)
Translates to: RSPGSQSRVIQLQSPWEEVYSQG*GRCRAD
Trigger: ATCAGCCCTACAGCGTCCGCATCCCTGAGAATACAC...CTCTTCCCAAGGGCTTTGCAGCTGGATCACTCTGGACTGGCTCCCTGGGGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR GCA 90 bp TGTCTTAGAATAGAAGCCCCTTCCCCATTCTCAGACGGTGTAATTCAGGCGGGGAGGAGTAGAGGACGCTaGCCCCTGCCCCCAAGTCGG +
Preference number: 4 (lower is better)
Translates to: CLRIEAPSPFSDGVIQAGRSRGR*PLPPSR
Trigger: CCGACTTGGGGGCAGGGGGCAGCGTCCTCTACTCCT...CCCCGCCTGAATTACACCGTCTGAGAATGGGGAAGGGGCTTCTATTCTAAGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000646131.1
CDS-3UTR GCA 90 bp GCCACATTCCTCCAAGTCACTGCTCTGTCACCCAGACTTGGGGCGGGGAGTGGGTTCCCCAAAGGTGCCTaGATCATTGTCAGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: ATFLQVTALSPRLGAGSGFPKGA*IIVSCQ
Trigger: CTGGCAACTGACAATGATGCAGGCACCTTTGGGGAA...CCCACTCCCCGCCCCAAGTCTGGGTGACAGAGCAGTGACTTGGAGGAATGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR GCA 90 bp GGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTCCGGCCAGCGCTGCCAAAGGCAGATaGACTGACAATGCTGTAGGT +
Preference number: 4 (lower is better)
Translates to: GMWRKCSETWTGVGCPASAAKGR*TDNAVG
Trigger: ACCTACAGCATTGTCAGTGCATCTGCCTTTGGCAGC...GCTGGCCGGACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp CCGAGGACAACCGCAGCCACTGTGACTACATGGAATCTACCAAGATGTAATGGGGCATGGCGTGGGTGGTaGGGATCTTGCCCGTGGTGC +
Preference number: 4 (lower is better)
Translates to: PRTTAATVTTWNLPRCNGAWRGW*GSCPWC
Trigger: GCACCACGGGCAAGATCCGCACCACCCACGCCATGC...CCCATTACATCTTGGTAGATTCCATGTAGTCACAGTGGCTGCGGTTGTCCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp CTAAACAGGTGGGAATTCTCAACAGGTCCCCAAGGAAGGATGAGGCCACATTCCAGACCCCCGCCGGGATaGCTTCAAGCACCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: LNRWEFSTGPQGRMRPHSRPPPG*LQAPRP
Trigger: TGGCCGAGGTGCTTGAAGGCATCCCGGCGGGGGTCT...GGAATGTGGCCTCATCCTTCCTTGGGGACCTGTTGAGAATTCCCACCTGTTTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR GCA 90 bp AGGACCCAACTAAACACACCCGTGGGCCCCCAGTTTGCAGCTTTGGTATTAGATGCATGCCCACCGGCATaGGGTAGGACACCAGGCCGT +
Preference number: 4 (lower is better)
Translates to: RTQLNTPVGPQFAALVLDACPPA*GRTPGR
Trigger: ACGGCCTGGTGTCCTACCGCATGCCGGTGGGCATGC...ATCTAATACCAAAGCTGCAAACTGGGGGCCCACGGGTGTGTTTAGTTGGGTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp CTAAACAGGTGGGAATTCTCAACAGGTCCCCAAGGAAGGATGAGGCCACATTCCCTTGGTGGGCGTGCCTaGATCACTGGCCACCACCCG +
Preference number: 4 (lower is better)
Translates to: LNRWEFSTGPQGRMRPHSLGGRA*ITGHHP
Trigger: CGGGTGGTGGCCAGTGATGCAGGCACGCCCACCAAG...GGAATGTGGCCTCATCCTTCCTTGGGGACCTGTTGAGAATTCCCACCTGTTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR GCA 90 bp CCGAGGACAACCGCAGCCACTGTGACTACATGGAATCTACCAAGATGTAATGGGCTTGGTGGGCGTGCCTaGATCACTGGCCACCACCCG +
Preference number: 4 (lower is better)
Translates to: PRTTAATVTTWNLPRCNGLGGRA*ITGHHP
Trigger: CGGGTGGTGGCCAGTGATGCAGGCACGCCCACCAAG...CCCATTACATCTTGGTAGATTCCATGTAGTCACAGTGGCTGCGGTTGTCCTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp CCCAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCCGCTGGCCTCATAGCTaGTCTGCAGAAAGATGGGCC +
Preference number: 4 (lower is better)
Translates to: PSLSSSWDYRYLTPHLAIRWPHS*SAERWA
Trigger: GGCCCATCTTTCTGCAGAGCAGCTATGAGGCCAGCG...GATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp TTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCTCCGTGGCTTTCAGCTaGAAGATGCTGTGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: FGLFQLSLSQAGPQTLGPSVAFS*KMLWPS
Trigger: TGAAGGCCACAGCATCTTGCAGCTGAAAGCCACGGA...GGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp CAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAGACGGCTGTACTGCTaGTGTGTGAACACGGGGGCC +
Preference number: 4 (lower is better)
Translates to: QPLKQLGLQVPNTTLGHLRRLYC*CVNTGA
Trigger: GGCCCCCGTGTTCACACAGCAGCAGTACAGCCGTCT...GAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGAATCTCAGTACCCAGTaGCAGATTCTCCAGGATGGC +
Preference number: 4 (lower is better)
Translates to: WEGGGPVWPLSAQPEPSWNLSTQ*QILQDG
Trigger: GCCATCCTGGAGAATCTGGCACTGGGTACTGAGATT...CCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp TGCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCGTTTTCCATCACCTCTaGCTGGTAGGTGCTTTTAGT +
Preference number: 4 (lower is better)
Translates to: CGVELGGRRACLASFSSAVFHHL*LVGAFS
Trigger: ACTAAAAGCACCTACCAGGCAGAGGTGATGGAAAAC...GGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp ACGGTCGGGGATCTCGTTAATGACGATCTTGACGCGCTGGTCGTCCCTCAGGATGTCAGGGTCCACGGCTaGCACAGCAATGAGTGTGGT +
Preference number: 4 (lower is better)
Translates to: TVGDLVNDDLDALVVPQDVRVHG*HSNECG
Trigger: ACCACACTCATTGCTGTGGCAGCCGTGGACCCTGAC...ATCCTGAGGGACGACCAGCGCGTCAAGATCGTCATTAACGAGATCCCCGACCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp TGGACGTCCAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGGCCACCTGCAGCGGCTaGATAGTCTCGTATGGCACT +
Preference number: 4 (lower is better)
Translates to: WTSSREGCGGNVARLGLEATCSG*IVSYGT
Trigger: AGTGCCATACGAGACTATGCAGCCGCTGCAGGTGGC...CTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTGGACGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp ACGGTCGGGGATCTCGTTAATGACGATCTTGACGCGCTGGTCGTCCCTCAGGATGCCACCTGCAGCGGCTaGATAGTCTCGTATGGCACT +
Preference number: 4 (lower is better)
Translates to: TVGDLVNDDLDALVVPQDATCSG*IVSYGT
Trigger: AGTGCCATACGAGACTATGCAGCCGCTGCAGGTGGC...ATCCTGAGGGACGACCAGCGCGTCAAGATCGTCATTAACGAGATCCCCGACCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp TGGAACTGCACATTGTCAGTATTGACAATGGCCCCAGTGATGTTGGAGAGCAGGCTGCGCCTGTCACGTTaGCCACGAGGGTGCCGCGTG +
Preference number: 4 (lower is better)
Translates to: WNCTLSVLTMAPVMLESRLRLSR*PRGCRV
Trigger: CACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAG...CCTGCTCTCCAACATCACTGGGGCCATTGTCAATACTGACAATGTGCAGTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp TCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTAGTGGATGGCCAGAATaGTGTAGAAGACAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: SEQLMRAARAKPRLSPRPSGWPE*CRRQGC
Trigger: ACAGCCTTGTCTTCTACAGCATTCTGGCCATCCACT...AGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp TGCAGTGTGAGGTCAGCAACCAGGTCGAGGGTTGGGGAGGGTCCACGGGGAGGTAGTGGATGGCCAGAATaGTGTAGAAGACAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: CSVRSATRSRVGEGPRGGSGWPE*CRRQGC
Trigger: ACAGCCTTGTCTTCTACAGCATTCTGGCCATCCACT...ACCTCCCCGTGGACCCTCCCCAACCCTCGACCTGGTTGCTGACCTCACACTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp CATCCAGGGCCAGCACCTGGATCAACTCTGAGCCCACCTTGGCGTCGGTGGCCAAGTGGATGGCCAGAATaGTGTAGAAGACAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: HPGPAPGSTLSPPWRRWPSGWPE*CRRQGC
Trigger: ACAGCCTTGTCTTCTACAGCATTCTGGCCATCCACT...TGGCCACCGACGCCAAGGTGGGCTCAGAGTTGATCCAGGTGCTGGCCCTGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGATCTGAGCAGCTGATGCGGCGAAGGTGCGCAGAATaGCGTCCATGCTCCCCATGG +
Preference number: 4 (lower is better)
Translates to: GQMLNERLAKVGSEQLMRRRCAE*RPCSPW
Trigger: CCATGGGGAGCATGGACGGCATTCTGCGCACCTTCG...CCGCATCAGCTGCTCAGATCCCACTTTTGCCAGACGCTCATTCAGCATCTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp TTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGGGAGAAAAGATTCCGTAGCTaGTCCTTGTTCTCATCGATC +
Preference number: 4 (lower is better)
Translates to: LRLLSRRGWCLRGGAGREKRFRS*SLFSSI
Trigger: GATCGATGAGAACAAGGAGCAGCTACGGAATCTTTT...CTCCCTCCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGAAAAGATTCCGTAGCTaGTCCTTGTTCTCATCGATC +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRKRFRS*SLFSSI
Trigger: GATCGATGAGAACAAGGAGCAGCTACGGAATCTTTT...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp CTGATGTGGAGGATGGTGCCGTTGGGTGGGCGCACAAAGACAGGGCGGTTGTCAATCAGGCTTGACAGCTaGTGGCTCACGCCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: LMWRMVPLGGRTKTGRLSIRLDS*WLTPKS
Trigger: ACTTTTGGGCGTGAGCCAGCAGCTGTCAAGCCTGAT...TGACAACCGCCCTGTCTTTGTGCGCCCACCCAACGGCACCATCCTCCACATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GTGGATAAGCAGTTCTGTCTGCGCAAAGTTCACCCGGCCCTTCTTGTCCACATGAAGCGCAGGCTACCCTaGCCTGGGCTGTGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: VDKQFCLRKVHPALLVHMKRRLP*PGLWSP
Trigger: AGGAGACCACAGCCCAGGGCAGGGTAGCCTGCGCTT...CATGTGGACAAGAAGGGCCGGGTGAACTTTGCGCAGACAGAACTGCTTATCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp CAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTATTTGGCGGATTCTGTaGGGGCGTTGCGCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: QQRGMWRKCSETWTGVGCIWRIL*GRCARR
Trigger: CCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAAT...ACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp TGGACGTCCAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGATTTGGCGGATTCTGTaGGGGCGTTGCGCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: WTSSREGCGGNVARLGLEIWRIL*GRCARR
Trigger: CCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAAT...CTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTGGACGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp TCCACAAACATGCCCCCACATCCCCCTAGGTCTACCTGTAGATCCTCCTGCTTCGTGGGGCGGGAGATATaGAGGGGGAGGCCAAGTCTT +
Preference number: 4 (lower is better)
Translates to: STNMPPHPPRSTCRSSCFVGREI*RGRPSL
Trigger: AAGACTTGGCCTCCCCCTGCATATCTCCCGCCCCAC...GAAGCAGGAGGATCTACAGGTAGACCTAGGGGGATGTGGGGGCATGTTTGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp TCTGCCTTTGAGCTTCTGTCTTGTTGCTGTTGCAGGAGCCATGAGCACAGAGGGCAGGGAGGGGAGCATTaGCAGCCTCCCACGCTTCTG +
Preference number: 4 (lower is better)
Translates to: SAFELLSCCCCRSHEHRGQGGEH*QPPTLL
Trigger: CAGAAGCGTGGGAGGCTGGCAATGCTCCCCTCCCTG...CCCTCTGTGCTCATGGCTCCTGCAACAGCAACAAGACAGAAGCTCAAAGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp CTCCAGGTGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTTCTGTGAAGCCCTCCTaGCTGGAGCCGCCCCTACTG +
Preference number: 4 (lower is better)
Translates to: LQVPKPSMEKLPNGKGSLSVKPS*LEPPLL
Trigger: CAGTAGGGGCGGCTCCAGGCAGGAGGGCTTCACAGA...AAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCACCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp CCCTCGCCTTTCTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGTGTGGTTTTGGTGAGTaGTTTGCTGATGACCCGTCA +
Preference number: 4 (lower is better)
Translates to: PSPFSQLPSLPGPLQRQLCGFGE*FADDPS
Trigger: TGACGGGTCATCAGCAAAGCACTCACCAAAACCACA...CAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAGAAAGGCGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp CTGCCTTTGAGCTTCTGTCTTGTTGCTGTTGCAGGAGCCATGAGCACAGAGGGCAGAGGCCAGGGCGGGTaGTGTGACAGAGTGGCAAGA +
Preference number: 4 (lower is better)
Translates to: LPLSFCLVAVAGAMSTEGRGQGG*CDRVAR
Trigger: TCTTGCCACTCTGTCACAGCACCCGCCCTGGCCTCT...GCCCTCTGTGCTCATGGCTCCTGCAACAGCAACAAGACAGAAGCTCAAAGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp AGGACCCAACTAAACACACCCGTGGGCCCCCAGTTTGCAGCTTTGGTATTAGATGGGTTTCCCGGGTGCTaGCAGCATCTGCCTGGTGCC +
Preference number: 4 (lower is better)
Translates to: RTQLNTPVGPQFAALVLDGFPGC*QHLPGA
Trigger: GGCACCAGGCAGATGCTGGCAGCACCCGGGAAACCC...ATCTAATACCAAAGCTGCAAACTGGGGGCCCACGGGTGTGTTTAGTTGGGTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp CTCCAGGTGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTCTGTCCTGGCATCTGTaGTGGCCCAGTGCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: LQVPKPSMEKLPNGKGSLLSWHL*WPSAGA
Trigger: TGCCCCAGCACTGGGCCAGCACAGATGCCAGGACAG...AAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCACCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp GGGCATTTCCAGCAGCTGGAGGTGATGCCACCTGGACTCGGAGGAGGACAGCTCTTTAGTCAAGTGAAATaGTCAGCCTACACCGGGGCC +
Preference number: 4 (lower is better)
Translates to: GHFQQLEVMPPGLGGGQLFSQVK*SAYTGA
Trigger: GGCCCCGGTGTAGGCTGAGCATTTCACTTGACTAAA...GAGCTGTCCTCCTCCGAGTCCAGGTGGCATCACCTCCAGCTGCTGGAAATGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp TCTACCTGTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAAGACTGCTTCAGAGACCGGTaGTGCAGGCTGCAGGAAGAC +
Preference number: 4 (lower is better)
Translates to: STCRSSCFRDRCCRLQEDCFRDR*CRLQED
Trigger: GTCTTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCA...GTCTTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp TCCAGGTGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTTAGCGCCTGGGCTCCTTaGGCCTCTCCCTGCACAGCT +
Preference number: 4 (lower is better)
Translates to: SRCQSPAWRSCQMAKVPFSAWAP*ASPCTA
Trigger: AGCTGTGCAGGGAGAGGCGCAAGGAGCCCAGGCGCT...AAAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCACCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp GGGCACAGGGTGGAACAGGAAGAGGGCCTGAGCTTGGGCCCAGCTCCATCACTGCGTGGGCCCCCAGTTTaGAGCTTTGGTATTAGATTA +
Preference number: 4 (lower is better)
Translates to: GHRVEQEEGLSLGPAPSLRGPPV*SFGIRL
Trigger: TAATCTAATACCAAAGCTGCAAACTGGGGGCCCACG...CAGTGATGGAGCTGGGCCCAAGCTCAGGCCCTCTTCCTGTTCCACCCTGTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp AGGATGGGCTTCTCAGAATCCCAAACCCTTGACCTCTCCTCACAACGCGAGGGTTTCCCACCACCAAGCTaGCCCACCCCACCCTACTGT +
Preference number: 4 (lower is better)
Translates to: RMGFSESQTLDLSSQREGFPPPS*PTPPYC
Trigger: ACAGTAGGGTGGGGTGGGGCAGCTTGGTGGTGGGAA...ACCCTCGCGTTGTGAGGAGAGGTCAAGGGTTTGGGATTCTGAGAAGCCCATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp AACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGCCGGGGGCTCGGACTaGGCGCGCCCCAAACGTCCA +
Preference number: 4 (lower is better)
Translates to: NRREHQSLLFISWAHIWEAGGSD*ARPKRP
Trigger: TGGACGTTTGGGGCGCGCCCAGTCCGAGCCCCCGGC...TTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp CTAAACAGGTGGGAATTCTCAACAGGTCCCCAAGGAAGGATGAGGCCACATTCCAGGCCACGTGGCAGCTaGTGGCAACATGGCGCCCCA +
Preference number: 4 (lower is better)
Translates to: LNRWEFSTGPQGRMRPHSRPRGS*WQHGAP
Trigger: TGGGGCGCCATGTTGCCACCAGCTGCCACGTGGCCT...GGAATGTGGCCTCATCCTTCCTTGGGGACCTGTTGAGAATTCCCACCTGTTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp TCCAGGTGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTTAGGCCACGTGGCAGCTaGTGGCAACATGGCGCCCCA +
Preference number: 4 (lower is better)
Translates to: SRCQSPAWRSCQMAKVPFRPRGS*WQHGAP
Trigger: TGGGGCGCCATGTTGCCACCAGCTGCCACGTGGCCT...AAAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCACCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp CTCGGGAGGCACCACCAGAGGCTAAAGCCCAACAGTAGAGCCCTGACCTCTTTTGATGGGCGTCCCCACTaGTGTATTCTCAGGGATGCG +
Preference number: 4 (lower is better)
Translates to: LGRHHQRLKPNSRALTSFDGRPH*CILRDA
Trigger: CGCATCCCTGAGAATACACCAGTGGGGACGCCCATC...AAAAGAGGTCAGGGCTCTACTGTTGGGCTTTAGCCTCTGGTGGTGCCTCCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp CCCAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCGATGGGCGTCCCCACTaGTGTATTCTCAGGGATGCG +
Preference number: 4 (lower is better)
Translates to: PSLSSSWDYRYLTPHLAIDGRPH*CILRDA
Trigger: CGCATCCCTGAGAATACACCAGTGGGGACGCCCATC...GATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp CCCCAAGGAAGGATGAGGCCACATTCCTCCAAGTCACTGCTCTGTCACCCAGACCCAAGTTGGCCAGGGTaGACAGAGGCCTGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: PQGRMRPHSSKSLLCHPDPSWPG*TEAWSC
Trigger: ACAAGACCAGGCCTCTGTCCACCCTGGCCAACTTGG...GTCTGGGTGACAGAGCAGTGACTTGGAGGAATGTGGCCTCATCCTTCCTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp GGCCACATTCCTCCAAGTCACTGCTCTGTCACCCAGACTTGGGGCGGGGAGTGGGAGATGATGAAGTGGTaGGAGTTGTTCCCCACCAAG +
Preference number: 4 (lower is better)
Translates to: GHIPPSHCSVTQTWGGEWEMMKW*ELFPTK
Trigger: CTTGGTGGGGAACAACTCCCACCACTTCATCATCTC...CCACTCCCCGCCCCAAGTCTGGGTGACAGAGCAGTGACTTGGAGGAATGTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp ATGCGGACAGGCCACCGCCCTCTTGTCTGCATGGCAGATGGGCACAGGGTGGAAGAGATGATGAAGTGGTaGGAGTTGTTCCCCACCAAG +
Preference number: 4 (lower is better)
Translates to: MRTGHRPLVCMADGHRVEEMMKW*ELFPTK
Trigger: CTTGGTGGGGAACAACTCCCACCACTTCATCATCTC...TTCCACCCTGTGCCCATCTGCCATGCAGACAAGAGGGCGGTGGCCTGTCCGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp TTCTCAACAGGTCCCCAAGGAAGGATGAGGCCACATTCCTCCAAGTCACTGCTCATGTCCGCCTTCCCCTaGACGGAGGTCGGGGAGATG +
Preference number: 4 (lower is better)
Translates to: FSTGPQGRMRPHSSKSLLMSAFP*TEVGEM
Trigger: CATCTCCCCGACCTCCGTCCAGGGGAAGGCGGACAT...GAGCAGTGACTTGGAGGAATGTGGCCTCATCCTTCCTTGGGGACCTGTTGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp CCTAGGTCTACCTGTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGCTGATGTTGTACAGTaGCTGGCTGAAGATGGGCCG +
Preference number: 4 (lower is better)
Translates to: PRSTCRSSCFRDRCCRLQADVVQ*LAEDGP
Trigger: CGGCCCATCTTCAGCCAGCCACTGTACAACATCAGC...CTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGACCTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp ATGAACCTTGGTAGATGCTCCCCGTCCCTGCAACCAACAGGTTCAGGAGGTCCCAGCGGTCCAGGTCTGTaGCATTCAGGAACAGCACCG +
Preference number: 4 (lower is better)
Translates to: MNLGRCSPSLQPTGSGGPSGPGL*HSGTAP
Trigger: CGGTGCTGTTCCTGAATGCCACAGACCTGGACCGCT...GGGACCTCCTGAACCTGTTGGTTGCAGGGACGGGGAGCATCTACCAAGGTTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp AGGTCCCCAGGGAGCCAGTCCAGAGTGATCCAGCTGCAAAGCCCTTGGGAAGAGGCATTGATCCGAAACTaGGTGGAGCCTTCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: RSPGSQSRVIQLQSPWEEALIRN*VEPSKE
Trigger: CTCCTTGGAAGGCTCCACCCAGTTTCGGATCAATGC...CTCTTCCCAAGGGCTTTGCAGCTGGATCACTCTGGACTGGCTCCCTGGGGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp CTCGGGAGGCACCACCAGAGGCTAAAGCCCAACAGTAGAGCCCTGACCTCTTTTCCAGTTTTCTGGTTGTaGCCCACACCCCCGTCCACT +
Preference number: 4 (lower is better)
Translates to: LGRHHQRLKPNSRALTSFPVFWL*PTPPST
Trigger: AGTGGACGGGGGTGTGGGCCACAACCAGAAAACTGG...AAAAGAGGTCAGGGCTCTACTGTTGGGCTTTAGCCTCTGGTGGTGCCTCCCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp CAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCGCGATGCCAGTTTTCTaGTTGTGGCCCACACCCCCG +
Preference number: 4 (lower is better)
Translates to: QPLKQLGLQVPNTTLGHLAMPVF*LWPTPP
Trigger: CGGGGGTGTGGGCCACAACCAGAAAACTGGCATCGC...GAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp CCTAGGTCTACCTGTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGCAACAGCCACCACCGTaGTCACATCAGAGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: PRSTCRSSCFRDRCCRLQQQPPP*SHQSLE
Trigger: CTCCAGACTCTGATGTGACCACGGTGGTGGCTGTTG...CTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGACCTAGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp ATGAACCTTGGTAGATGCTCCCCGTCCCTGCAACCAACAGGTTCAGGAGGTCCCATTCTCCCCCAGGTCTaGGTCAACAGCCACCACCGT +
Preference number: 4 (lower is better)
Translates to: MNLGRCSPSLQPTGSGGPILPQV*VNSHHR
Trigger: ACGGTGGTGGCTGTTGACCCAGACCTGGGGGAGAAT...GGGACCTCCTGAACCTGTTGGTTGCAGGGACGGGGAGCATCTACCAAGGTTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp TCTACCTGTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAAGACATTCTCCCCCAGGTCTaGGTCAACAGCCACCACCGT +
Preference number: 4 (lower is better)
Translates to: STCRSSCFRDRCCRLQEDILPQV*VNSHHR
Trigger: ACGGTGGTGGCTGTTGACCCAGACCTGGGGGAGAAT...GTCTTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp AGGTCCCCAGGGAGCCAGTCCAGAGTGATCCAGCTGCAAAGCCCTTGGGAAGAGAACTTGTTGGGTGGCTaGATGCTGTACACCAGGGTG +
Preference number: 4 (lower is better)
Translates to: RSPGSQSRVIQLQSPWEENLLGG*MLYTRV
Trigger: CACCCTGGTGTACAGCATCCAGCCACCCAACAAGTT...CTCTTCCCAAGGGCTTTGCAGCTGGATCACTCTGGACTGGCTCCCTGGGGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp GGGAGTGGGGCTCAGGGCTCCTCCCTAGGAATCATGGGGCCTTACCTCCCTCTAGGCTGTAGAACTTGTTaGGTGGCTGGATGCTGTACA +
Preference number: 4 (lower is better)
Translates to: GSGAQGSSLGIMGPYLPLGCRTC*VAGCCT
Trigger: TGTACAGCATCCAGCCACCCAACAAGTTCTACAGCC...TAGAGGGAGGTAAGGCCCCATGATTCCTAGGGAGGAGCCCTGAGCCCCACTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp AGGTGGGAATTCTCAACAGGTCCCCAAGGAAGGATGAGGCCACATTCCTCCAAGCTGTGGCACTGCTGGTaGCTTTCAGAGGGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: RWEFSTGPQGRMRPHSSKLWHCW*LSEGAC
Trigger: GCAGGCCCCCTCTGAAAGCCACCAGCAGTGCCACAG...CTTGGAGGAATGTGGCCTCATCCTTCCTTGGGGACCTGTTGAGAATTCCCACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp AAAAACATGGCAAGGACCCAACTAAACACACCCGTGGGCCCCCAGTTTGCAGCTCCACCACTTGGTAGATaGAGACCCCCGCCGGGATGC +
Preference number: 4 (lower is better)
Translates to: KNMARTQLNTPVGPQFAAPPLGR*RPPPGC
Trigger: GCATCCCGGCGGGGGTCTCCATCTACCAAGTGGTGG...AGCTGCAAACTGGGGGCCCACGGGTGTGTTTAGTTGGGTCCTTGCCATGTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGCCACCACTTGGTAGATaGAGACCCCCGCCGGGATGC +
Preference number: 4 (lower is better)
Translates to: LSSSWDYRYLTPHLAISRPPLGR*RPPPGC
Trigger: GCATCCCGGCGGGGGTCTCCATCTACCAAGTGGTGG...CCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp AGGATGGGCTTCTCAGAATCCCAAACCCTTGACCTCTCCTCACAACGCGAGGGTCGGCCGGGAAGAAGGTaGGCGTCTCGTCGTTCACAT +
Preference number: 4 (lower is better)
Translates to: RMGFSESQTLDLSSQREGRPGRR*ASRRSH
Trigger: ATGTGAACGACGAGACGCCCACCTTCTTCCCGGCCG...ACCCTCGCGTTGTGAGGAGAGGTCAAGGGTTTGGGATTCTGAGAAGCCCATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGTGCTCTGCAGAAAGATaGGCCGGTTGTCATTCACAT +
Preference number: 4 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQCSAER*AGCHSH
Trigger: ATGTGAATGACAACCGGCCCATCTTTCTGCAGAGCA...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp TCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTTTTGGGTTGAGGTCGTaGTCAATGGCCGTGATATTG +
Preference number: 4 (lower is better)
Translates to: SEQLMRAARAKPRLSPRPFGLRS*SMAVIL
Trigger: CAATATCACGGCCATTGACCACGACCTCAACCCAAA...AGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGATCTGAGCAGCTGATGCGGAGGCGTCCTCCTGGTTaGGCACCAGGCGATCAGTGT +
Preference number: 4 (lower is better)
Translates to: GQMLNERLAKVGSEQLMRRRPPG*APGDQC
Trigger: ACACTGATCGCCTGGTGCCCAACCAGGAGGACGCCT...CCGCATCAGCTGCTCAGATCCCACTTTTGCCAGACGCTCATTCAGCATCTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GCCTTGGTGAAGCGTGGTGGCTGGTCGTTGATGTCCTCTAGCACAACGCGCACCCCAGCTCCCGATTCATaGGGGACTTCACCATTACAG +
Preference number: 4 (lower is better)
Translates to: ALVKRGGWSLMSSSTTRTPAPDS*GTSPLQ
Trigger: CTGTAATGGTGAAGTCCCCCATGAATCGGGAGCTGG...GGTGCGCGTTGTGCTAGAGGACATCAACGACCAGCCACCACGCTTCACCAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGGCTCTGGTAGGTCGCTaGCATTGTCAATCACTGAGA +
Preference number: 4 (lower is better)
Translates to: WEGGGPVWPLSAQPEPSWALVGR*HCQSLR
Trigger: TCTCAGTGATTGACAATGCCAGCGACCTACCAGAGC...CCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CTCGTAGTCCACTGTCCGGTTGGCAATGACCTTCCCTGCCGAGGAGTCCTCCAGAGTCAGCTTGGCATTTaGCACACTGACAGAGCGCTC +
Preference number: 4 (lower is better)
Translates to: LVVHCPVGNDLPCRGVLQSQLGI*HTDRAL
Trigger: GAGCGCTCTGTCAGTGTGCCAAATGCCAAGCTGACT...CTGGAGGACTCCTCGGCAGGGAAGGTCATTGCCAACCGGACAGTGGACTACGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp ACGATGATCGCCATCTGCAGGGCAGACATGTCATCCGGCAGCCGGACAGAGATGTTTCGCGACGGTTGCTaGCTACATCCCCAGGGTTGT +
Preference number: 4 (lower is better)
Translates to: TMIAICRADMSSGSRTEMFRDGC*LHPQGC
Trigger: ACAACCCTGGGGATGTAGCCAGCAACCGTCGCGAAA...CATCTCTGTCCGGCTGCCGGATGACATGTCTGCCCTGCAGATGGCGATCATCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGTTGACATCCAGCACTTaGATCACCACCTGCACTGAA +
Preference number: 4 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQLTSST*ITTCTE
Trigger: TTCAGTGCAGGTGGTGATCCAAGTGCTGGATGTCAA...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CGGCGATCTCACTCAGGTTCTCCGGTAGGTCATCCTCATGCTCCGCCTGGGCGGTTGACATCCAGCACTTaGATCACCACCTGCACTGAA +
Preference number: 4 (lower is better)
Translates to: RRSHSGSPVGHPHAPPGRLTSST*ITTCTE
Trigger: TTCAGTGCAGGTGGTGATCCAAGTGCTGGATGTCAA...CCGCCCAGGCGGAGCATGAGGATGACCTACCGGAGAACCTGAGTGAGATCGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTCTCGTAGGACTGCAGTaGCCGCTGTGTGGTCACCAA +
Preference number: 4 (lower is better)
Translates to: QQRGMWRKCSETWTGVGCLVGLQ*PLCGHQ
Trigger: TTGGTGACCACACAGCGGCCACTGCAGTCCTACGAG...ACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp CTGAGGCTCTGGCAAGAAGAAAAGGTAGCAAAGTGGGCAAGGGAGGAGTGGAGGGTCAGCAGCTGGTACTaGGGGCTGCCTTTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: LRLWQEEKVAKWAREEWRVSSWY*GLPFGG
Trigger: GCCTCCAAAAGGCAGCCCCCAGTACCAGCTGCTGAC...CCTCCACTCCTCCCTTGCCCACTTTGCTACCTTTTCTTCTTGCCAGAGCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000642965.1
CDS-3UTR CCA 90 bp GGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTCCGGCCAGCCCATCGGGCTGCAGATaGAAGTTCTTCTCTTCGTTG +
Preference number: 4 (lower is better)
Translates to: GMWRKCSETWTGVGCPASPSGCR*KFFSSL
Trigger: CAACGAAGAGAAGAACTTCCATCTGCAGCCCGATGG...GCTGGCCGGACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp TGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCACCTGGACAACCAGGTCGAGGGTTaGGGAGGGTCCACGGGGAGG +
Preference number: 4 (lower is better)
Translates to: CSLTLTFLSTWGCHLHLDNQVEG*GGSTGR
Trigger: CCTCCCCGTGGACCCTCCCCAACCCTCGACCTGGTT...GTCCAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp AATGGCCCCAGTGATGTTGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCGCGGTGAAGCGTGGTGGCTaGTCGTTGATGTCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: NGPSDVGEQVDELLLEAAVKRGG*SLMSSS
Trigger: GCTAGAGGACATCAACGACCAGCCACCACGCTTCAC...CGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAACATCACTGGGGCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TGGTCAGTGGCCATCATGGTGATGACCGAGGTGCCCGCCGGCTCATTCTCATACGTGAAGCGTGGTGGCTaGTCGTTGATGTCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: WSVAIMVMTEVPAGSFSYVKRGG*SLMSSS
Trigger: GCTAGAGGACATCAACGACCAGCCACCACGCTTCAC...GTATGAGAATGAGCCGGCGGGCACCTCGGTCATCACCATGATGGCCACTGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGCCCGGAAGTAGTGGATaGCCAGAATGCTGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: WEGGGPVWPLSAQPEPSWPGSSG*PECCRR
Trigger: TCTTCTACAGCATTCTGGCCATCCACTACTTCCGGG...CCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp ACTGAATTTTCGCGACGGTTGCTGGCTACATCCCCAGGGTTGTCTTTGGCCAAGTTCCATGGGTGCGCGTaGGGCTGTTCCACAGGTCGG +
Preference number: 4 (lower is better)
Translates to: TEFSRRLLATSPGLSLAKFHGCA*GCSTGR
Trigger: CCGACCTGTGGAACAGCCCCACGCGCACCCATGGAA...CTTGGCCAAAGACAACCCTGGGGATGTAGCCAGCAACCGTCGCGAAAATTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GAAGCCGCGCACACGGTCGGGGATCTCGTTAATGACGATCTTGACGCGCTGGTCCCCTCACGAATGATCTaGCCCAGCTTGGCAATGTTG +
Preference number: 4 (lower is better)
Translates to: EAAHTVGDLVNDDLDALVPSRMI*PSLAML
Trigger: CAACATTGCCAAGCTGGGCCAGATCATTCGTGAGGG...GACCAGCGCGTCAAGATCGTCATTAACGAGATCCCCGACCGTGTGCGCGGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCACCTGGACCAGGCTACCCTGCCCTaGGCTGTGGTCTCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: CSLTLTFLSTWGCHLHLDQATLP*AVVSWL
Trigger: GAGCCAGGAGACCACAGCCCAGGGCAGGGTAGCCTG...GTCCAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp CTCATACACGCTTGTGCTGAACTGGGGCTTGGAGAACTGTGGCCGGCAGTCATTCTTGAGCTCCACTGGTaGCTTGTGGCGGAAGCGCAG +
Preference number: 4 (lower is better)
Translates to: LIHACAELGLGELWPAVILELHW*LVAEAQ
Trigger: CTGCGCTTCCGCCACAAGCCACCAGTGGAGCTCAAG...AATGACTGCCGGCCACAGTTCTCCAAGCCCCAGTTCAGCACAAGCGTGTATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TGGATAAGCAGTTCTGTCTGCGCAAAGTTCACCCGGCCCTTCTTGTCCACATGGCTGCCGTGCACCACATaGATCCCATCGGGCCCCTTG +
Preference number: 4 (lower is better)
Translates to: WISSSVCAKFTRPFLSTWLPCTT*IPSGPL
Trigger: CAAGGGGCCCGATGGGATCCATGTGGTGCACGGCAG...CCATGTGGACAAGAAGGGCCGGGTGAACTTTGCGCAGACAGAACTGCTTATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp AGGTGGGAATTCTCAACAGGTCCCCAAGGAAGGATGAGGCCACATTCCTCCAAGTGCCCCCACCTAGTCTaGCTGTCCATCTGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: RWEFSTGPQGRMRPHSSKCPHLV*LSIWEG
Trigger: CCCCTCCCAGATGGACAGCCAGACTAGGTGGGGGCA...CTTGGAGGAATGTGGCCTCATCCTTCCTTGGGGACCTGTTGAGAATTCCCACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp AATCATGGGGCCTTACCTCCCTCTAGAATGAACCTTGGTAGATGCTCCCCGTCCTCTGTCACCCAGACTTaGGGCGGGGAGTGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: NHGALPPSRMNLGRCSPSSVTQT*GGEWGS
Trigger: TGAGCCCCACTCCCCGCCCCAAGTCTGGGTGACAGA...GGACGGGGAGCATCTACCAAGGTTCATTCTAGAGGGAGGTAAGGCCCCATGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp GTGGATAAGCAGTTCTGTCTGCGCAAAGTTCACCCGGCCCTTCTTGTCCACATGTCAGTCTGCAAAGGCTaGGCCACGGCCTTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: VDKQFCLRKVHPALLVHMSVCKG*ATALAQ
Trigger: CTGGGCCAAGGCCGTGGCCCAGCCTTTGCAGACTGA...CATGTGGACAAGAAGGGCCGGGTGAACTTTGCGCAGACAGAACTGCTTATCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGATCTGAGCAGCTGATGCGGACCATTACAGATCCCTaGGCCGCCTCCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GQMLNERLAKVGSEQLMRTITDP*AASSSS
Trigger: GGAGGAGGAGGAGGCGGCCCAGGGATCTGTAATGGT...CCGCATCAGCTGCTCAGATCCCACTTTTGCCAGACGCTCATTCAGCATCTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp AGAAGGAAAAGTCCAGGAGGGGGAGGGCTCTCAATTGGGTTTCAGGCACCAGGCCCCAGATTCCCTGTTTaGCTCAGCCTCCGAGTCGGA +
Preference number: 4 (lower is better)
Translates to: RRKSPGGGGLSIGFQAPGPRFPV*LSLRVG
Trigger: TCCGACTCGGAGGCTGAGCCAAACAGGGAATCTGGG...GCCTGGTGCCTGAAACCCAATTGAGAGCCCTCCCCCTCCTGGACTTTTCCTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp GGGCCCAGCCAGTGCTCTCCAGGTGGCCCTGCTCATCTGTACCCTCTGGTCATGAGTCTTGGTGGAAGCTaGCATAACACAGAGCCTCAT +
Preference number: 4 (lower is better)
Translates to: GPSQCSPGGPAHLYPLVMSLGGS*HNTEPH
Trigger: ATGAGGCTCTGTGTTATGCCAGCTTCCACCAAGACT...CATGACCAGAGGGTACAGATGAGCAGGGCCACCTGGAGAGCACTGGCTGGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp AGGACCCAACTAAACACACCCGTGGGCCCCCAGTTTGCAGCTTTGGTATTAGATCAGCCTCCCCGAGGGTaGGATGGTCTGGACCTCTCC +
Preference number: 4 (lower is better)
Translates to: RTQLNTPVGPQFAALVLDQPPRG*DGLDLS
Trigger: GGAGAGGTCCAGACCATCCCACCCTCGGGGAGGCTG...ATCTAATACCAAAGCTGCAAACTGGGGGCCCACGGGTGTGTTTAGTTGGGTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp GTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAAGACAGTGGCCTCAGGGCACCCACGTTaGGATCAATCAGGAAGGGAT +
Preference number: 4 (lower is better)
Translates to: VDPPASETGAAGCRKTVASGHPR*DQSGRD
Trigger: ATCCCTTCCTGATTGATCCCAACGTGGGTGCCCTGA...GGCCACTGTCTTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp TCCACAAACATGCCCCCACATCCCCCTAGGTCTACCTGTAGATCCTCCTGCTTCCTCCAAGCATGGTCTTaGCAGCCGTCTTGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: STNMPPHPPRSTCRSSCFLQAWS*QPSWWP
Trigger: GGGCCACCAAGACGGCTGCCAAGACCATGCTTGGAG...GAAGCAGGAGGATCTACAGGTAGACCTAGGGGGATGTGGGGGCATGTTTGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp AAAAACATGGCAAGGACCCAACTAAACACACCCGTGGGCCCCCAGTTTGCAGCTGGTGGAACAGATGCCTaGGTGCCAGCTGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: KNMARTQLNTPVGPQFAAGGTDA*VPAGRR
Trigger: CCTCCTCCCAGCTGGCACCCAGGCATCTGTTCCACC...AGCTGCAAACTGGGGGCCCACGGGTGTGTTTAGTTGGGTCCTTGCCATGTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp AGGACCCAACTAAACACACCCGTGGGCCCCCAGTTTGCAGCTTTGGTATTAGATGTGCTGGCCCAGTGCTaGGGCAAAACCTCGGGGCTC +
Preference number: 4 (lower is better)
Translates to: RTQLNTPVGPQFAALVLDVLAQC*GKTSGL
Trigger: GAGCCCCGAGGTTTTGCCCCAGCACTGGGCCAGCAC...ATCTAATACCAAAGCTGCAAACTGGGGGCCCACGGGTGTGTTTAGTTGGGTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CTGCCTTTGAGCTTCTGTCTTGTTGCTGTTGCAGGAGCCATGAGCACAGAGGGCCCATGCTCATCGCCCTaGCCTGCATCTTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LPLSFCLVAVAGAMSTEGPCSSP*PASSSC
Trigger: GCAGGAGGAAGATGCAGGCCAGGGCGATGAGCATGG...GCCCTCTGTGCTCATGGCTCCTGCAACAGCAACAAGACAGAAGCTCAAAGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CTCCAGGTGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTGGGAGGGTGGGGAGCTaGAGGTCAGTGCCCTGTCTA +
Preference number: 4 (lower is better)
Translates to: LQVPKPSMEKLPNGKGSLGRVGS*RSVPCL
Trigger: TAGACAGGGCACTGACCTCCAGCTCCCCACCCTCCC...AAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCACCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp GGGCACAGGGTGGAACAGGAAGAGGGCCTGAGCTTGGGCCCAGCTCCATCACTGCTTCTGACCTTCACTTaGCCATTGGCTCACAATGTG +
Preference number: 4 (lower is better)
Translates to: GHRVEQEEGLSLGPAPSLLLTFT*PLAHNV
Trigger: CACATTGTGAGCCAATGGCCAAGTGAAGGTCAGAAG...CAGTGATGGAGCTGGGCCCAAGCTCAGGCCCTCTTCCTGTTCCACCCTGTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGCTGTATCAGCTTGATTaGCCCCTCACGAATGATCTG +
Preference number: 4 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQLYQLD*PLTNDL
Trigger: CAGATCATTCGTGAGGGGCCAATCAAGCTGATACAG...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000619887.4
ENST00000647092.1
3UTR CAA 72 bp GTGTACTCAGCCTTGGTGAAGCGTGGTGGCTGGTCGTaGATGTCCTCTAGCACAACGCGCACCTCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: VYSALVKRGGWS*MSSSTTRTSCS
Trigger: ACTGCAGGAGGTGCGCGTTGTGCTAGAGGACATCAACGACCAGCCACCACGCTTCACCAAGGCTGAGTACAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CAA 72 bp ATGATCACGTCGCGAAGTTTGTGCAGGGGTGTGGATTaGGCGGATTCTGTGCGGGCGTTGCGCTCGAAGGCA +
Preference number: 4 (lower is better)
Translates to: MITSRSLCRGVD*ADSVRALRSKA
Trigger: TGCCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAATCCACACCCCTGCACAAACTTCGCGACGTGATCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CAA 72 bp CCCTTGATTGGCCCCTCACGAATGATCTGGCCCAGCTaGGCAATGTTGTCATACTCCTGGATGGCAGCCCGC +
Preference number: 4 (lower is better)
Translates to: PLIGPSRMIWPS*AMLSYSWMAAR
Trigger: GCGGGCTGCCATCCAGGAGTATGACAACATTGCCAAGCTGGGCCAGATCATTCGTGAGGGGCCAATCAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642965.1
CDS-3UTR TCA 90 bp CAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTAATGCCCAGGCCGGGCTaGCTAGCCCCGACCACCTCA +
Preference number: 4 (lower is better)
Translates to: QLGLQVPNTTLGHLKDILMPRPG*LAPTTS
Trigger: TGAGGTGGTCGGGGCTAGTCAGCCCGGCCTGGGCAT...TAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp AAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTGCTCCCGGATCACTGTaGCGATACCGCGGGCGCTGT +
Preference number: 4 (lower is better)
Translates to: KQLGLQVPNTTLGHLKDIAPGSL*RYRGRC
Trigger: ACAGCGCCCGCGGTATCGTCACAGTGATCCGGGAGC...AATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp CCCCAAGGAAGGATGAGGCCACATTCCTCCAAGTCACTGCTCTGTCACCCAGACCCTTCACAGTCAGGATaGAGCCATGGCTGTACAGGG +
Preference number: 4 (lower is better)
Translates to: PQGRMRPHSSKSLLCHPDPSQSG*SHGCTG
Trigger: CCCTGTACAGCCATGGCTTCATCCTGACTGTGAAGG...GTCTGGGTGACAGAGCAGTGACTTGGAGGAATGTGGCCTCATCCTTCCTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR TCA 90 bp TGTCTTAGAATAGAAGCCCCTTCCCCATTCTCAGACGGTGTAATTCAGGCGGGGCCTGTGCCAGCTCAGTaGTGGCCACGCTGTACTCGG +
Preference number: 4 (lower is better)
Translates to: CLRIEAPSPFSDGVIQAGPVPAQ*WPRCTR
Trigger: CCGAGTACAGCGTGGCCATCACTGAGCTGGCACAGG...CCCCGCCTGAATTACACCGTCTGAGAATGGGGAAGGGGCTTCTATTCTAAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS-3UTR TCA 90 bp CTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGGCAGAGACGTGGTGGTaGTTTCCCCTGAGCGGGCAT +
Preference number: 4 (lower is better)
Translates to: LSSSWDYRYLTPHLAISRAETWW*FPLSGH
Trigger: ATGCCCGCTCAGGGGAAATCACCACCACGTCTCTGC...CCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp AGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATCCAGCTCGGTGGTGGTaGCCACCACGCCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SWDYRYLTPHLAISRTFYPARWW*PPRRCC
Trigger: GCAGCAGCGGCGTGGTGGTCACCACCACCGAGCTGG...ATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp AGGATGGGCTTCTCAGAATCCCAAACCCTTGACCTCTCCTCACAACGCGAGGGTTCACATCCAGGACAGTaGCGAACACGGTGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: RMGFSESQTLDLSSQREGSHPGQ*RTRWLC
Trigger: GCACAGCCACCGTGTTCGTCACTGTCCTGGATGTGA...ACCCTCGCGTTGTGAGGAGAGGTCAAGGGTTTGGGATTCTGAGAAGCCCATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR TCA 90 bp CTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGTATCAGCACGTGGGATaGGTTCCGCTCCCGGTCCAG +
Preference number: 4 (lower is better)
Translates to: LSSSWDYRYLTPHLAISRYQHVG*VPLPVQ
Trigger: CTGGACCGGGAGCGGAACTCATCCCACGTGCTGATA...CCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp CAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCTGTACTGCTGCTGTGTaGACACGGGGGCCTCATCGT +
Preference number: 4 (lower is better)
Translates to: QPLKQLGLQVPNTTLGHLCTAAV*TRGPHR
Trigger: ACGATGAGGCCCCCGTGTTCACACAGCAGCAGTACA...GAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp GGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGATCTGAGCAGCTGATGCGGTGGAGTCATTGGTGGTaGCGATCTCAAAGGCCCCCG +
Preference number: 4 (lower is better)
Translates to: GQMLNERLAKVGSEQLMRWSHWW*RSQRPP
Trigger: CGGGGGCCTTTGAGATCGTCACCACCAATGACTCCA...CCGCATCAGCTGCTCAGATCCCACTTTTGCCAGACGCTCATTCAGCATCTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp TTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCCTCATCTGTGGCTGTaGCTTGAAGGACTGAGAATC +
Preference number: 4 (lower is better)
Translates to: FGLFQLSLSQAGPQTLGPPHLWL*LEGLRI
Trigger: GATTCTCAGTCCTTCAAGTCACAGCCACAGATGAGG...GGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp CCTGGATCAACTCTGAGCCCACCTTGGCGTCGGTGGCCACCCCTGCAGTGTACTGGCATTGTCAATCACTaGGAGAGTGACCTCATAGGT +
Preference number: 4 (lower is better)
Translates to: PGSTLSPPWRRWPPLQCTGIVNH*ESDLIG
Trigger: ACCTATGAGGTCACTCTCTCAGTGATTGACAATGCC...AGTACACTGCAGGGGTGGCCACCGACGCCAAGGTGGGCTCAGAGTTGATCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp GCCGGGGCTGTAGGCCATGAAGAGGTCGAAGGTGCGCAGAATGCCGTCCATGCTCAAGGCTGTACTCAATaGGTGCAAAGTTGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: AGAVGHEEVEGAQNAVHAQGCTQ*VQSCLS
Trigger: ACTCAGGCAACTTTGCACTCATTGAGTACAGCCTTG...AGCATGGACGGCATTCTGCGCACCTTCGACCTCTTCATGGCCTACAGCCCCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CTCATACACGCTTGTGCTGAACTGGGGCTTGGAGAACTGTGGCCGGCAGTCATTCGTTGCCGGCTGCGATaGAGTAGTACACGATCGCGT +
Preference number: 4 (lower is better)
Translates to: LIHACAELGLGELWPAVIRCRLR*SSTRSR
Trigger: ACGCGATCGTGTACTACTTCATCGCAGCCGGCAACG...AATGACTGCCGGCCACAGTTCTCCAAGCCCCAGTTCAGCACAAGCGTGTATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp GATTGGCCCCTCACGAATGATCTGGCCCAGCTTGGCAATGTTGTCATACTCCTGGGTCATCATCAGGCTTaGCAGCTGCTGGCTCACGCC +
Preference number: 4 (lower is better)
Translates to: DWPLTNDLAQLGNVVILLGHHQA*QLLAHA
Trigger: GGCGTGAGCCAGCAGCTGTCAAGCCTGATGATGACC...CAGGAGTATGACAACATTGCCAAGCTGGGCCAGATCATTCGTGAGGGGCCAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp AACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAACCTCGGGCAGGCTGTTaGGGTCGGTGGCCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: NRREHQSLLFISWAHIWEPRAGC*GRWPAA
Trigger: CGCTGCTGGCCACCGACCTCAACAGCCTGCCCGAGG...TTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp AAAAACATGGCAAGGACCCAACTAAACACACCCGTGGGCCCCCAGTTTGCAGCTTCCCTTCTCTCCCTCTaGGCCTTGGAGCTGTTGCGC +
Preference number: 4 (lower is better)
Translates to: KNMARTQLNTPVGPQFAASLLSL*ALELLR
Trigger: GCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGA...AGCTGCAAACTGGGGGCCCACGGGTGTGTTTAGTTGGGTCCTTGCCATGTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR TCA 90 bp CCGAGGACAACCGCAGCCACTGTGACTACATGGAATCTACCAAGATGTAATGGGCCTGTCTGCTGTTCATaGCGCTCTGCAAGCCGGCCG +
Preference number: 4 (lower is better)
Translates to: PRTTAATVTTWNLPRCNGPVCCS*RSASRP
Trigger: CGGCCGGCTTGCAGAGCGTCATGAACAGCAGACAGG...CCCATTACATCTTGGTAGATTCCATGTAGTCACAGTGGCTGCGGTTGTCCTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp GTGGCCATGATGCTGTCCAGTTTAACAGTGCCTTGCCCCCATCCACATTCCCTACCCCAGACACAGGGATaGGGCAGGAACATGGGCCAA +
Preference number: 4 (lower is better)
Translates to: VAMMLSSLTVPCPHPHSLPQTQG*GRNMGQ
Trigger: TTGGCCCATGTTCCTGCCTCATCCCTGTGTCTGGGG...TAGGGAATGTGGATGGGGGCAAGGCACTGTTAAACTGGACAGCATCATGGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR TCA 90 bp CATCCACATTCCCTAGGTAAGTCTTCCCTATACCCGCTGCCCTGGGTCCAGCTGCAGGAGACCTGCTTCTaGCCTTCACTTGGCCATTGG +
Preference number: 4 (lower is better)
Translates to: HPHSLGKSSLYPLPWVQLQETCF*PSLGHW
Trigger: CCAATGGCCAAGTGAAGGTCAGAAGCAGGTCTCCTG...CAGCTGGACCCAGGGCAGCGGGTATAGGGAAGACTTACCTAGGGAATGTGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR TCA 90 bp GCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTTAGTCAAGCCCAGAGCAGCTCACTaGGCTCCGAAAGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: AKAQHGEVAKWQRFPLVKPRAAH*APKGLG
Trigger: CCCCAGCCCTTTCGGAGCTCAGTGAGCTGCTCTGGG...CTTGACTAAAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp AAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTAGGAGTAGAGGACGCTaGCCCCTGCCCCCAAGTCGG +
Preference number: 4 (lower is better)
Translates to: KQLGLQVPNTTLGHLKDIRSRGR*PLPPSR
Trigger: CCGACTTGGGGGCAGGGGGCAGCGTCCTCTACTCCT...AATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp CCCAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCCGATGGTGTAGCCAATaGCCCGGGGACGTCCTTTAT +
Preference number: 4 (lower is better)
Translates to: PSLSSSWDYRYLTPHLAIRWCSQ*PGDVLY
Trigger: ATAAAGGACGTCCCCGGGGCATTGGCTACACCATCG...GATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp AGGTGGGAATTCTCAACAGGTCCCCAAGGAAGGATGAGGCCACATTCCTCCAAGGGAGTCTTCATCTGTTaGCCGGAGCCGCACCAGCTG +
Preference number: 4 (lower is better)
Translates to: RWEFSTGPQGRMRPHSSKGVFIC*PEPHQL
Trigger: CAGCTGGTGCGGCTCCGGGCAACAGATGAAGACTCC...CTTGGAGGAATGTGGCCTCATCCTTCCTTGGGGACCTGTTGAGAATTCCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR GCA 90 bp CTGCCTTTGAGCTTCTGTCTTGTTGCTGTTGCAGGAGCCATGAGCACAGAGGGCCAGCACCGTGGCTCCTaGCATGATGTTCTCCACCAC +
Preference number: 4 (lower is better)
Translates to: LPLSFCLVAVAGAMSTEGQHRGS*HDVLHH
Trigger: GTGGTGGAGAACATCATGGCAGGAGCCACGGTGCTG...GCCCTCTGTGCTCATGGCTCCTGCAACAGCAACAAGACAGAAGCTCAAAGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp AGAAGGAAAAGTCCAGGAGGGGGAGGGCTCTCAATTGGGTTTCAGGCACCAGGCGTTGATGTAGTAGGGTaGGTCCTTCCACGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: RRKSPGGGGLSIGFQAPGVDVVG*VLPRGV
Trigger: CACCCCACGTGGAAGGACGCACCCTACTACATCAAC...GCCTGGTGCCTGAAACCCAATTGAGAGCCCTCCCCCTCCTGGACTTTTCCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp CCCAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCGTTGATGTAGTAGGGTaGGTCCTTCCACGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: PSLSSSWDYRYLTPHLAIVDVVG*VLPRGV
Trigger: CACCCCACGTGGAAGGACGCACCCTACTACATCAAC...GATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp CTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGAGCTCTTGGTGGGCGTaGCTGCATCACTGGCCACCA +
Preference number: 4 (lower is better)
Translates to: LSSSWDYRYLTPHLAISRSSWWA*LHHWPP
Trigger: TGGTGGCCAGTGATGCAGGCACGCCCACCAAGAGCT...CCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp TCTGCCTTTGAGCTTCTGTCTTGTTGCTGTTGCAGGAGCCATGAGCACAGAGGGAGCTCTTGGTGGGCGTaGCTGCATCACTGGCCACCA +
Preference number: 4 (lower is better)
Translates to: SAFELLSCCCCRSHEHRGSSWWA*LHHWPP
Trigger: TGGTGGCCAGTGATGCAGGCACGCCCACCAAGAGCT...CCCTCTGTGCTCATGGCTCCTGCAACAGCAACAAGACAGAAGCTCAAAGGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp AACAGGTCCCCAAGGAAGGATGAGGCCACATTCCTCCAAGTCACTGCTCTGTCACCACGTCGTTGTCCGTaGAGTTCAGCCAGACCACCC +
Preference number: 4 (lower is better)
Translates to: NRSPRKDEATFLQVTALSPRRCP*SSARPP
Trigger: GGGTGGTCTGGCTGAACTGCACGGACAACGACGTGG...TGACAGAGCAGTGACTTGGAGGAATGTGGCCTCATCCTTCCTTGGGGACCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR GCA 90 bp AAAAACATGGCAAGGACCCAACTAAACACACCCGTGGGCCCCCAGTTTGCAGCTCCACGTCGTTGTCCGTaGAGTTCAGCCAGACCACCC +
Preference number: 4 (lower is better)
Translates to: KNMARTQLNTPVGPQFAAPRRCP*SSARPP
Trigger: GGGTGGTCTGGCTGAACTGCACGGACAACGACGTGG...AGCTGCAAACTGGGGGCCCACGGGTGTGTTTAGTTGGGTCCTTGCCATGTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp CAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCCTCAAACTTCCCCTCTaGGCCCGACAGGATGCGGTA +
Preference number: 4 (lower is better)
Translates to: QPLKQLGLQVPNTTLGHLLKLPL*ARQDAV
Trigger: TACCGCATCCTGTCGGGCGCAGAGGGGAAGTTTGAG...GAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp GAATGCTTGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCAGACAGGGATCTCAGCTaGCCGGGGCGGGGACCCGTT +
Preference number: 4 (lower is better)
Translates to: ECLFIDIDFLVHVGMPPPDRDLS*PGRGPV
Trigger: AACGGGTCCCCGCCCCGGGCAGCTGAGATCCCTGTC...TGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACAAGCATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp TGGATAAGCAGTTCTGTCTGCGCAAAGTTCACCCGGCCCTTCTTGTCCACATGGACTCCCAGTCCCGGTTaGCCGCAGTCTTCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: WISSSVCAKFTRPFLSTWTPSPG*PQSSGS
Trigger: GCTTCCTGAAGACTGCGGGCAACCGGGACTGGGAGT...CCATGTGGACAAGAAGGGCCGGGTGAACTTTGCGCAGACAGAACTGCTTATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GAATGCTTGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCACTGCGCCTGTCACGTTaGCCACGAGGGTGCCGCGTG +
Preference number: 4 (lower is better)
Translates to: ECLFIDIDFLVHVGMPPPLRLSR*PRGCRV
Trigger: CACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAG...TGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACAAGCATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp GTAGCTGCTCCTTGTTCTCATCGATCATCTGGATCACCCGGTCCACGTCCAGGAACAACGCGCACCTCCTaGAGTGTGAGGTCAGCAACC +
Preference number: 4 (lower is better)
Translates to: VAAPCSHRSSGSPGPRPGTTRTS*SVRSAT
Trigger: GGTTGCTGACCTCACACTGCAGGAGGTGCGCGTTGT...TCCTGGACGTGGACCGGGTGATCCAGATGATCGATGAGAACAAGGAGCAGCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GCAATGTTGTCATACTCCTGGATGGCAGCCCGCAGGTATCGGTCATCATCAGGCACAACGCGCACCTCCTaGAGTGTGAGGTCAGCAACC +
Preference number: 4 (lower is better)
Translates to: AMLSYSWMAARRYRSSSGTTRTS*SVRSAT
Trigger: GGTTGCTGACCTCACACTGCAGGAGGTGCGCGTTGT...GCCTGATGATGACCGATACCTGCGGGCTGCCATCCAGGAGTATGACAACATTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp CAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTGTTGTTGCCAATGTCTaGATCCAGGGCCAGCACCTG +
Preference number: 4 (lower is better)
Translates to: QQRGMWRKCSETWTGVGCVVANV*IQGQHL
Trigger: CAGGTGCTGGCCCTGGATGCAGACATTGGCAACAAC...ACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp GTGGATAAGCAGTTCTGTCTGCGCAAAGTTCACCCGGCCCTTCTTGTCCACATGCGAAGGTGCGCAGAATaGCGTCCATGCTCCCCATGG +
Preference number: 4 (lower is better)
Translates to: VDKQFCLRKVHPALLVHMRRCAE*RPCSPW
Trigger: CCATGGGGAGCATGGACGGCATTCTGCGCACCTTCG...CATGTGGACAAGAAGGGCCGGGTGAACTTTGCGCAGACAGAACTGCTTATCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GAGAGTGACCTCATAGGTGGCAACCAGCTCCCGATTCATGGGGGACTTCACCATGGTCCACGTCCAGGATaGGGTTGGTATCGCGGTTCA +
Preference number: 4 (lower is better)
Translates to: ESDLIGGNQLPIHGGLHHGPRPG*GWYRGS
Trigger: TGAACCGCGATACCAACCGCATCCTGGACGTGGACC...ATGGTGAAGTCCCCCATGAATCGGGAGCTGGTTGCCACCTATGAGGTCACTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp AGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGCCAGTCGGTGGCCAGCAGCGTaGCCGTGCTGCCGTGCACCA +
Preference number: 4 (lower is better)
Translates to: REHQSLLFISWAHIWEASRWPAA*PCCRAP
Trigger: TGGTGCACGGCAGCACGGGCACGCTGCTGGCCACCG...ACTGGCTTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp AGATCTTATGAAGGTAGAGGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGAGACCGGCCCTGTCCCTaGCCTTGCTCCCTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: RSYEGRGQMLNERLAKVGDRPCP*PCSLGG
Trigger: CCCTCCCAGGGAGCAAGGGCAGGGACAGGGCCGGTC...TCCCACTTTTGCCAGACGCTCATTCAGCATCTGACCTCTACCTTCATAAGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp CTGCGGCCTCTTACCATCCATAACTCGTTCCTGGCCACAGAGCAAGTTATTGACTGGAGCTGTTGCGCCTaGTCCCTGGGCAAAGGAGCC +
Preference number: 4 (lower is better)
Translates to: LRPLTIHNSFLATEQVIDWSCCA*SLGKGA
Trigger: GGCTCCTTTGCCCAGGGAGCAGGCGCAACAGCTCCA...GTCAATAACTTGCTCTGTGGCCAGGAACGAGTTATGGATGGTAAGAGGCCGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp GTGGCCATGATGCTGTCCAGTTTAACAGTGCCTTGCCCCCATCCACATTCCCTAGAGCCTTGGAGCTGTTaGGCCTGCTCCCTGGGCAAA +
Preference number: 4 (lower is better)
Translates to: VAMMLSSLTVPCPHPHSLEPWSC*ACSLGK
Trigger: TTTGCCCAGGGAGCAGGCGCAACAGCTCCAAGGCTC...TAGGGAATGTGGATGGGGGCAAGGCACTGTTAAACTGGACAGCATCATGGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp TCCACAAACATGCCCCCACATCCCCCTAGGTCTACCTGTAGATCCTCCTGCTTCAACCTCTTCCTGGTTTaGTTCCCCTGGGGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: STNMPPHPPRSTCRSSCFNLFLV*FPWGLP
Trigger: AGGGAGGCCCCAGGGGAAGCAAACCAGGAAGAGGTT...GAAGCAGGAGGATCTACAGGTAGACCTAGGGGGATGTGGGGGCATGTTTGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp CCGAGGACAACCGCAGCCACTGTGACTACATGGAATCTACCAAGATGTAATGGGCCCTGTGGGAGCAGCTaGCTCCCTCCTGGTGGAACA +
Preference number: 4 (lower is better)
Translates to: PRTTAATVTTWNLPRCNGPCGSS*LPPGGT
Trigger: TGTTCCACCAGGAGGGAGGCAGCTGCTCCCACAGGG...CCCATTACATCTTGGTAGATTCCATGTAGTCACAGTGGCTGCGGTTGTCCTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp CTGCGGCCTCTTACCATCCATAACTCGTTCCTGGCCACAGAGCAAGTTATTGACCTGTCCTGGCATCTGTaGTGGCCCAGTGCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: LRPLTIHNSFLATEQVIDLSWHL*WPSAGA
Trigger: TGCCCCAGCACTGGGCCAGCACAGATGCCAGGACAG...GTCAATAACTTGCTCTGTGGCCAGGAACGAGTTATGGATGGTAAGAGGCCGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp GTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAAGACAGTGGCCTTTAGTCAAGTGAAATaGTCAGCCTACACCGGGGCC +
Preference number: 4 (lower is better)
Translates to: VDPPASETGAAGCRKTVAFSQVK*SAYTGA
Trigger: GGCCCCGGTGTAGGCTGAGCATTTCACTTGACTAAA...GGCCACTGTCTTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp GTGGCCATGATGCTGTCCAGTTTAACAGTGCCTTGCCCCCATCCACATTCCCTAGCCTTGCCCTCCAGGTaGCAAAGCCCAGCATGGAGA +
Preference number: 4 (lower is better)
Translates to: VAMMLSSLTVPCPHPHSLALPSR*QSPAWR
Trigger: TCTCCATGCTGGGCTTTGGCACCTGGAGGGCAAGGC...TAGGGAATGTGGATGGGGGCAAGGCACTGTTAAACTGGACAGCATCATGGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp CCTAGGTCTACCTGTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGTGCAGACCCCCTCGCTaGTGCTTGATGAAAGACTTC +
Preference number: 4 (lower is better)
Translates to: PRSTCRSSCFRDRCCRLQCRPPR*CLMKDF
Trigger: GAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCTGCA...CTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGACCTAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp TGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTTAGTCAAGGGCTCACGAGTGCATaGCCCACCACCCTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: CQSPAWRSCQMAKVPFSQGLTSA*PTTLGA
Trigger: GGCTCCCAGGGTGGTGGGGCATGCACTCGTGAGCCC...TTGACTAAAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp CTGCGGCCTCTTACCATCCATAACTCGTTCCTGGCCACAGAGCAAGTTATTGACCTGTTCATGACGCTCTaGAAGCCGGCCGCGCTGGAC +
Preference number: 4 (lower is better)
Translates to: LRPLTIHNSFLATEQVIDLFMTL*KPAALD
Trigger: GTCCAGCGCGGCCGGCTTGCAGAGCGTCATGAACAG...GTCAATAACTTGCTCTGTGGCCAGGAACGAGTTATGGATGGTAAGAGGCCGCAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp TGGGAATTCTCAACAGGTCCCCAAGGAAGGATGAGGCCACATTCCTCCAAGTCACAGCTGGTGGCAACATaGCGCCCCATGGCTCCGTGT +
Preference number: 4 (lower is better)
Translates to: WEFSTGPQGRMRPHSSKSQLVAT*RPMAPC
Trigger: ACACGGAGCCATGGGGCGCCATGTTGCCACCAGCTG...TGACTTGGAGGAATGTGGCCTCATCCTTCCTTGGGGACCTGTTGAGAATTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp GGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGATCTGAGCAGCTGATGCGGGATGGGCGTCCCCACTaGTGTATTCTCAGGGATGCG +
Preference number: 4 (lower is better)
Translates to: GQMLNERLAKVGSEQLMRDGRPH*CILRDA
Trigger: CGCATCCCTGAGAATACACCAGTGGGGACGCCCATC...CCGCATCAGCTGCTCAGATCCCACTTTTGCCAGACGCTCATTCAGCATCTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp AGGATGGGCTTCTCAGAATCCCAAACCCTTGACCTCTCCTCACAACGCGAGGGTGATGGGCGTCCCCACTaGTGTATTCTCAGGGATGCG +
Preference number: 4 (lower is better)
Translates to: RMGFSESQTLDLSSQREGDGRPH*CILRDA
Trigger: CGCATCCCTGAGAATACACCAGTGGGGACGCCCATC...ACCCTCGCGTTGTGAGGAGAGGTCAAGGGTTTGGGATTCTGAGAAGCCCATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp CTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGGCTGGTAGGCCTGTGTaGTCTCGTAGTCCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: LSSSWDYRYLTPHLAISRAGRPV*SRSPAP
Trigger: GGGAGCTGGACTACGAGACCACACAGGCCTACCAGC...CCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp CCCAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCGGGTGGACAGAGGCCTaGTCTTGTCTTGATCTGTGG +
Preference number: 4 (lower is better)
Translates to: PSLSSSWDYRYLTPHLAIGWTEA*SCLDLW
Trigger: CCACAGATCAAGACAAGACCAGGCCTCTGTCCACCC...GATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp CAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCCCAAGTTGGCCAGGGTaGACAGAGGCCTGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: QPLKQLGLQVPNTTLGHLPSWPG*TEAWSC
Trigger: ACAAGACCAGGCCTCTGTCCACCCTGGCCAACTTGG...GAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp AGTGGGGCTCAGGGCTCCTCCCTAGGAATCATGGGGCCTTACCTCCCTCTAGAATATTCCCTGAAACGATaGTGTAGCCAATGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: SGAQGSSLGIMGPYLPLEYSLKR*CSQCPG
Trigger: CCCGGGGCATTGGCTACACCATCGTTTCAGGGAATA...TTCTAGAGGGAGGTAAGGCCCCATGATTCCTAGGGAGGAGCCCTGAGCCCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp CTCGGGAGGCACCACCAGAGGCTAAAGCCCAACAGTAGAGCCCTGACCTCTTTTGTCAGGATGAAGCCATaGCTGTACAGGGGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: LGRHHQRLKPNSRALTSFVRMKP*LYRGFS
Trigger: GGAGAACCCCCTGTACAGCCATGGCTTCATCCTGAC...AAAAGAGGTCAGGGCTCTACTGTTGGGCTTTAGCCTCTGGTGGTGCCTCCCGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp CCCAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCGTCAGGATGAAGCCATaGCTGTACAGGGGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: PSLSSSWDYRYLTPHLAIVRMKP*LYRGFS
Trigger: GGAGAACCCCCTGTACAGCCATGGCTTCATCCTGAC...GATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp TGGACGTCCAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGGACTGTAGCGTCAGATaGGGTGCGGTCATCGTTCAG +
Preference number: 4 (lower is better)
Translates to: WTSSREGCGGNVARLGLEDCSVR*GAVIVQ
Trigger: CTGAACGATGACCGCACCCCATCTGACGCTACAGTC...CTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTGGACGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAAGACAGTGGCCGAGATGATGAAGTGGTaGGAGTTGTTCCCCACCAAG +
Preference number: 4 (lower is better)
Translates to: VDPPASETGAAGCRKTVAEMMKW*ELFPTK
Trigger: CTTGGTGGGGAACAACTCCCACCACTTCATCATCTC...GGCCACTGTCTTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTGCTGATGTTGTACAGTaGCTGGCTGAAGATGGGCCG +
Preference number: 4 (lower is better)
Translates to: QQRGMWRKCSETWTGVGCADVVQ*LAEDGP
Trigger: CGGCCCATCTTCAGCCAGCCACTGTACAACATCAGC...ACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GTGGCCATGATGCTGTCCAGTTTAACAGTGCCTTGCCCCCATCCACATTCCCTAGCGATGCCAGTTTTCTaGTTGTGGCCCACACCCCCG +
Preference number: 4 (lower is better)
Translates to: VAMMLSSLTVPCPHPHSLAMPVF*LWPTPP
Trigger: CGGGGGTGTGGGCCACAACCAGAAAACTGGCATCGC...TAGGGAATGTGGATGGGGGCAAGGCACTGTTAAACTGGACAGCATCATGGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CCCAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCCAACAGCCACCACCGTaGTCACATCAGAGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: PSLSSSWDYRYLTPHLAIQQPPP*SHQSLE
Trigger: CTCCAGACTCTGATGTGACCACGGTGGTGGCTGTTG...GATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp GAGGTCCCCAGGGAGCCAGTCCAGAGTGATCCAGCTGCAAAGCCCTTGGGAAGAGTAGAACTTGTTGGGTaGCTGGATGCTGTACACCAG +
Preference number: 4 (lower is better)
Translates to: EVPREPVQSDPAAKPLGRVELVG*LDAVHQ
Trigger: CTGGTGTACAGCATCCAGCCACCCAACAAGTTCTAC...TCTTCCCAAGGGCTTTGCAGCTGGATCACTCTGGACTGGCTCCCTGGGGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp CTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACACTGTGGCACTGCTaGTGGCTTTCAGAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: LSSSWDYRYLTPHLAISRTLWHC*WLSEGA
Trigger: GGCCCCCTCTGAAAGCCACCAGCAGTGCCACAGTGT...CCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp AAAAACATGGCAAGGACCCAACTAAACACACCCGTGGGCCCCCAGTTTGCAGCTACACTGTGGCACTGCTaGTGGCTTTCAGAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: KNMARTQLNTPVGPQFAATLWHC*WLSEGA
Trigger: GGCCCCCTCTGAAAGCCACCAGCAGTGCCACAGTGT...AGCTGCAAACTGGGGGCCCACGGGTGTGTTTAGTTGGGTCCTTGCCATGTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp TCCAGGTGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTTCCACCACTTGGTAGATaGAGACCCCCGCCGGGATGC +
Preference number: 4 (lower is better)
Translates to: SRCQSPAWRSCQMAKVPFPPLGR*RPPPGC
Trigger: GCATCCCGGCGGGGGTCTCCATCTACCAAGTGGTGG...AAAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCACCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CCCCAAGGAAGGATGAGGCCACATTCCTCCAAGTCACTGCTCTGTCACCCAGACCCTCATCGAGGTCGATaGCCACCACTTGGTAGATGG +
Preference number: 4 (lower is better)
Translates to: PQGRMRPHSSKSLLCHPDPHRGR*PPLGRW
Trigger: CCATCTACCAAGTGGTGGCCATCGACCTCGATGAGG...GTCTGGGTGACAGAGCAGTGACTTGGAGGAATGTGGCCTCATCCTTCCTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp CATCCACATTCCCTAGGTAAGTCTTCCCTATACCCGCTGCCCTGGGTCCAGCTGCCTCATCGAGGTCGATaGCCACCACTTGGTAGATGG +
Preference number: 4 (lower is better)
Translates to: HPHSLGKSSLYPLPWVQLPHRGR*PPLGRW
Trigger: CCATCTACCAAGTGGTGGCCATCGACCTCGATGAGG...CAGCTGGACCCAGGGCAGCGGGTATAGGGAAGACTTACCTAGGGAATGTGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp AGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCATGCTGGTGGAGCTCTTaGTGGGCGTGCCTGCATCAC +
Preference number: 4 (lower is better)
Translates to: SLSSSWDYRYLTPHLAISCWWSS*WACLHH
Trigger: GTGATGCAGGCACGCCCACCAAGAGCTCCACCAGCA...TGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp AAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTGCATGTAGGCGGCTGTaGTCTCCCGGTCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: KQLGLQVPNTTLGHLKDIACRRL*SPGPGP
Trigger: TGGGCCTGGACCGGGAGACCACAGCCGCCTACATGC...AATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp CAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCGCGGGGCCTGGTCAGTaGCCGACACATTCATCATGT +
Preference number: 4 (lower is better)
Translates to: QPLKQLGLQVPNTTLGHLAGPGQ*PTHSSC
Trigger: ACATGATGAATGTGTCGGCCACTGACCAGGCCCCGC...GAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp CTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGTTGAAGGGCGGGGCCTaGTCAGTGGCCGACACATTC +
Preference number: 4 (lower is better)
Translates to: LSSSWDYRYLTPHLAISRLKGGA*SVADTF
Trigger: GAATGTGTCGGCCACTGACCAGGCCCCGCCCTTCAA...CCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp CTGATGTGGAGGATGGTGCCGTTGGGTGGGCGCACAAAGACAGGGCGGTTGTCAGATGAGGCCGCTGATTaGGTCGATGATGAAGAACTC +
Preference number: 4 (lower is better)
Translates to: LMWRMVPLGGRTKTGRLSDEAAD*VDDEEL
Trigger: GAGTTCTTCATCATCGACCCAATCAGCGGCCTCATC...TGACAACCGCCCTGTCTTTGTGCGCCCACCCAACGGCACCATCCTCCACATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CCCGCCGGCTCATTCTCATACACGCTTGTGCTGAACTGGGGCTTGGAGAACTGTCTTGGTGAAGCGTGGTaGCTGGTCGTTGATGTCCTC +
Preference number: 4 (lower is better)
Translates to: PAGSFSYTLVLNWGLENCLGEAW*LVVDVL
Trigger: GAGGACATCAACGACCAGCCACCACGCTTCACCAAG...ACAGTTCTCCAAGCCCCAGTTCAGCACAAGCGTGTATGAGAATGAGCCGGCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TGGTCGTTGATGTCCTCTAGCACAACGCGCACCTCCTGCAGTGTGAGGTCAGCAAGCCTTGGTGAAGCGTaGTGGCTGGTCGTTGATGTC +
Preference number: 4 (lower is better)
Translates to: WSLMSSSTTRTSCSVRSASLGEA*WLVVDV
Trigger: GACATCAACGACCAGCCACCACGCTTCACCAAGGCT...TGCTGACCTCACACTGCAGGAGGTGCGCGTTGTGCTAGAGGACATCAACGACCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CGCACACGGTCGGGGATCTCGTTAATGACGATCTTGACGCGCTGGTCGTCCCTCCCCGGAAGTAGTGGATaGCCAGAATGCTGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: RTRSGISLMTILTRWSSLPGSSG*PECCRR
Trigger: TCTTCTACAGCATTCTGGCCATCCACTACTTCCGGG...GAGGGACGACCAGCGCGTCAAGATCGTCATTAACGAGATCCCCGACCGTGTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CTCCTGGCTCCTCGTCCAGCTCAGTCTGTATCAGCTCAGAGATGGAGGAGTGGCCATCTTCAGAGTCGTTaGCAAGGGCCCGGAAGTAGT +
Preference number: 4 (lower is better)
Translates to: LLAPRPAQSVSAQRWRSGHLQSR*QGPGSS
Trigger: ACTACTTCCGGGCCCTTGCCAACGACTCTGAAGATG...GCCACTCCTCCATCTCTGAGCTGATACAGACTGAGCTGGACGAGGAGCCAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642965.1
CDS-3UTR CCA 90 bp CGCACACGGTCGGGGATCTCGTTAATGACGATCTTGACGCGCTGGTCGTCCCTCATGTTGGAGAGCAGGTaGATGAACTCCTCCTCGAAG +
Preference number: 4 (lower is better)
Translates to: RTRSGISLMTILTRWSSLMLESR*MNSSSK
Trigger: CTTCGAGGAGGAGTTCATCCACCTGCTCTCCAACAT...GAGGGACGACCAGCGCGTCAAGATCGTCATTAACGAGATCCCCGACCGTGTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGATCTGAGCAGCTGATGCGGCGTCCAGGATGCGGTTaGTATCGCGGTTCACCACGT +
Preference number: 4 (lower is better)
Translates to: GQMLNERLAKVGSEQLMRRPGCG*YRGSPR
Trigger: ACGTGGTGAACCGCGATACCAACCGCATCCTGGACG...CCGCATCAGCTGCTCAGATCCCACTTTTGCCAGACGCTCATTCAGCATCTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCACCTGGACGCAGCCGGACAGAGATaGCAGGCTGCACGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: CSLTLTFLSTWGCHLHLDAAGQR*QAARPG
Trigger: TCCTGGACGTGCAGCCTGCCATCTCTGTCCGGCTGC...GTCCAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp CTGGTCAGTGGCCATCATGGTGATGACCGAGGTGCCCGCCGGCTCATTCTCATACCAGCCACACAGGGTTaGCTCCATCAAAGGAGTACT +
Preference number: 4 (lower is better)
Translates to: LVSGHHGDDRGARRLILIPATQG*LHQRST
Trigger: AGTACTCCTTTGATGGAGCCAACCCTGTGTGGCTGG...TATGAGAATGAGCCGGCGGGCACCTCGGTCATCACCATGATGGCCACTGACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCACCTGGACTTCCATGGGTGCGCGTaGGGCTGTTCCACAGGTCGG +
Preference number: 4 (lower is better)
Translates to: CSLTLTFLSTWGCHLHLDFHGCA*GCSTGR
Trigger: CCGACCTGTGGAACAGCCCCACGCGCACCCATGGAA...GTCCAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp GATTGGCCCCTCACGAATGATCTGGCCCAGCTTGGCAATGTTGTCATACTCCTGCGCCCAAAAGTTCCATaGGTGCGCGTGGGGCTGTTC +
Preference number: 4 (lower is better)
Translates to: DWPLTNDLAQLGNVVILLRPKVP*VRVGLF
Trigger: GAACAGCCCCACGCGCACCCATGGAACTTTTGGGCG...CAGGAGTATGACAACATTGCCAAGCTGGGCCAGATCATTCGTGAGGGGCCAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TGGACGTCCAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGAGGCTTGACAGCTGCTaGCTCACGCCCAAAAGTTCC +
Preference number: 4 (lower is better)
Translates to: WTSSREGCGGNVARLGLERLDSC*LTPKSS
Trigger: GGAACTTTTGGGCGTGAGCCAGCAGCTGTCAAGCCT...CTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTGGACGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp ACGATGATCGCCATCTGCAGGGCAGACATGTCATCCGGCAGCCGGACAGAGATGCCCTCACGAATGATCTaGCCCAGCTTGGCAATGTTG +
Preference number: 4 (lower is better)
Translates to: TMIAICRADMSSGSRTEMPSRMI*PSLAML
Trigger: CAACATTGCCAAGCTGGGCCAGATCATTCGTGAGGG...CATCTCTGTCCGGCTGCCGGATGACATGTCTGCCCTGCAGATGGCGATCATCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCACCTGGACCCCCTTGAGCTCCACTaGTGGCTTGTGGCGGAAGCG +
Preference number: 4 (lower is better)
Translates to: CSLTLTFLSTWGCHLHLDPLELH*WLVAEA
Trigger: CGCTTCCGCCACAAGCCACCAGTGGAGCTCAAGGGG...GTCCAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp GAATGCTTGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCAAGGGGATGTCCGCGCTaGGCCTCCCTTGCGCCTGCT +
Preference number: 4 (lower is better)
Translates to: ECLFIDIDFLVHVGMPPPRGCPR*ASLAPA
Trigger: AGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCT...TGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACAAGCATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp TGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTTAGTCAATTCCTGCCCGCCTCCTaGTCCCGATGCAGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: CQSPAWRSCQMAKVPFSQFLPAS*SRCREG
Trigger: CCCCTCCCTGCATCGGGACCAGGAGGCGGGCAGGAA...TTGACTAAAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp GCTGCCCAGCTCCTGTCCCAGTCAGCTGGCCAGGATCCCACCACAAAGCTGCCCAAAGGAACATTCTCTTaGCAGCATGGGTCCTTTTTG +
Preference number: 4 (lower is better)
Translates to: AAQLLSQSAGQDPTTKLPKGTFS*QHGSFL
Trigger: CAAAAAGGACCCATGCTGCCAAGAGAATGTTCCTTT...GGGCAGCTTTGTGGTGGGATCCTGGCCAGCTGACTGGGACAGGAGCTGGGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp TCTGCCTTTGAGCTTCTGTCTTGTTGCTGTTGCAGGAGCCATGAGCACAGAGGGTCTTGGCAGCCGTCTTaGTGGCCCCTCTTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: SAFELLSCCCCRSHEHRGSWQPS*WPLFRA
Trigger: TGCCCTGAAGAGGGGCCACCAAGACGGCTGCCAAGA...CCCTCTGTGCTCATGGCTCCTGCAACAGCAACAAGACAGAAGCTCAAAGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp AGGACCCAACTAAACACACCCGTGGGCCCCCAGTTTGCAGCTTTGGTATTAGATGGTGGAACAGATGCCTaGGTGCCAGCTGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: RTQLNTPVGPQFAALVLDGGTDA*VPAGRR
Trigger: CCTCCTCCCAGCTGGCACCCAGGCATCTGTTCCACC...ATCTAATACCAAAGCTGCAAACTGGGGGCCCACGGGTGTGTTTAGTTGGGTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp GTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAAGACAGTGGCCTGCCAAAGCCCAGCATaGAGAAGTTGCCAAATGGCA +
Preference number: 4 (lower is better)
Translates to: VDPPASETGAAGCRKTVACQSPA*RSCQMA
Trigger: TGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCA...GGCCACTGTCTTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CTCCAGGTGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTGCCCTCTTGTCTGCATaGCAGATGGGCACAGGGTGG +
Preference number: 4 (lower is better)
Translates to: LQVPKPSMEKLPNGKGSLALLSA*QMGTGW
Trigger: CCACCCTGTGCCCATCTGCCATGCAGACAAGAGGGC...AAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCACCTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp ACCCGTGGGCCCCCAGTTTGCAGCTTTGGTATTAGATTACTGCTAGGGACCCTGCCAAGGAGTGAGCTCTaGCTTGTCACTCCCCACCTC +
Preference number: 4 (lower is better)
Translates to: TRGPPVCSFGIRLLLGTLPRSEL*LVTPHL
Trigger: GAGGTGGGGAGTGACAAGCCAGAGCTCACTCCTTGG...CAGGGTCCCTAGCAGTAATCTAATACCAAAGCTGCAAACTGGGGGCCCACGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp AGGATGGGCTTCTCAGAATCCCAAACCCTTGACCTCTCCTCACAACGCGAGGGTCTGACAGCACCATTCTaGGCTGAGGCCCCTCCACTT +
Preference number: 4 (lower is better)
Translates to: RMGFSESQTLDLSSQREGLTAPF*AEAPPL
Trigger: AAGTGGAGGGGCCTCAGCCCAGAATGGTGCTGTCAG...ACCCTCGCGTTGTGAGGAGAGGTCAAGGGTTTGGGATTCTGAGAAGCCCATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp GGATCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCTTCTATCATTCCTCTaGGCCTTCCAAGAAGTACAC +
Preference number: 4 (lower is better)
Translates to: GSEQLMRAARAKPRLSPRLLSFL*AFQEVH
Trigger: GTGTACTTCTTGGAAGGCCCAGAGGAATGATAGAAG...CCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642965.1
CDS-3UTR CCA 90 bp AATGGCCCCAGTGATGTTGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCGCGCAGGGGCTGAGGCTCTaGCAAGAAGAAAAGGTAGCA +
Preference number: 4 (lower is better)
Translates to: NGPSDVGEQVDELLLEAAQGLRL*QEEKVA
Trigger: TGCTACCTTTTCTTCTTGCCAGAGCCTCAGCCCCTG...CGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAACATCACTGGGGCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR CAA 72 bp CAGCCGTCTTGGTGGCCCCTCTTCAGGGCACCCACGTaGGGATCAATCAGGAAGGGATTGAAGATGATCGAG +
Preference number: 4 (lower is better)
Translates to: QPSWWPLFRAPT*GSIRKGLKMIE
Trigger: CTCGATCATCTTCAATCCCTTCCTGATTGATCCCAACGTGGGTGCCCTGAAGAGGGGCCACCAAGACGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CAA 72 bp GAGTCAGGAGACCTGCTTCTGACCTTCACTTGGCCATaGGCTCACAATGTGGCCTTGGCCTTCCCACCACCA +
Preference number: 4 (lower is better)
Translates to: ESGDLLLTFTWP*AHNVALAFPPP
Trigger: TGGTGGTGGGAAGGCCAAGGCCACATTGTGAGCCAATGGCCAAGTGAAGGTCAGAAGCAGGTCTCCTGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CAA 72 bp AGCTTGATTGGCCCCTCACGAATGATCTGGCCCAGCTaGGCAATGTTGTCATACTCCTGGATGGCAGCCCGC +
Preference number: 4 (lower is better)
Translates to: SLIGPSRMIWPS*AMLSYSWMAAR
Trigger: GCGGGCTGCCATCCAGGAGTATGACAACATTGCCAAGCTGGGCCAGATCATTCGTGAGGGGCCAATCAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647092.1
CDS-3UTR TCA 90 bp CAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTCAAAGAAGTGGTTGGTaGAGAAGGGCAGCCGGTTCA +
Preference number: 4 (lower is better)
Translates to: QQRGMWRKCSETWTGVGCQRSGW*RRAAGS
Trigger: TGAACCGGCTGCCCTTCTTCACCAACCACTTCTTTG...ACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp GAATGCTTGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCAGCTCCCGGATCACTGTaGCGATACCGCGGGCGCTGT +
Preference number: 4 (lower is better)
Translates to: ECLFIDIDFLVHVGMPPPAPGSL*RYRGRC
Trigger: ACAGCGCCCGCGGTATCGTCACAGTGATCCGGGAGC...TGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACAAGCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp ACCCGTGGGCCCCCAGTTTGCAGCTTTGGTATTAGATTACTGCTAGGGACCCTGAGGTCAGCACTCCGCTaGTGTAGTCCAGGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: TRGPPVCSFGIRLLLGTLRSALR*CSPGQR
Trigger: TCTTTGCCCTGGACTACATCAGCGGAGTGCTGACCT...CAGGGTCCCTAGCAGTAATCTAATACCAAAGCTGCAAACTGGGGGCCCACGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp TGTCCACAAACATGCCCCCACATCCCCCTAGGTCTACCTGTAGATCCTCCTGCTCCTTCACAGTCAGGATaGAGCCATGGCTGTACAGGG +
Preference number: 4 (lower is better)
Translates to: CPQTCPHIPLGLPVDPPAPSQSG*SHGCTG
Trigger: CCCTGTACAGCCATGGCTTCATCCTGACTGTGAAGG...AGCAGGAGGATCTACAGGTAGACCTAGGGGGATGTGGGGGCATGTTTGTGGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp ACCCGTGGGCCCCCAGTTTGCAGCTTTGGTATTAGATTACTGCTAGGGACCCTGCCTTCACAGTCAGGATaGAGCCATGGCTGTACAGGG +
Preference number: 4 (lower is better)
Translates to: TRGPPVCSFGIRLLLGTLPSQSG*SHGCTG
Trigger: CCCTGTACAGCCATGGCTTCATCCTGACTGTGAAGG...CAGGGTCCCTAGCAGTAATCTAATACCAAAGCTGCAAACTGGGGGCCCACGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp AAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTCCTGTGCCAGCTCAGTaGTGGCCACGCTGTACTCGG +
Preference number: 4 (lower is better)
Translates to: KQLGLQVPNTTLGHLKDIPVPAQ*WPRCTR
Trigger: CCGAGTACAGCGTGGCCATCACTGAGCTGGCACAGG...AATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp CTGCCTTTGAGCTTCTGTCTTGTTGCTGTTGCAGGAGCCATGAGCACAGAGGGCTGTACAGTGGCTGGCTaGAGATGGGCCGGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: LPLSFCLVAVAGAMSTEGCTVAG*RWAGCH
Trigger: ATGACAACCGGCCCATCTTCAGCCAGCCACTGTACA...GCCCTCTGTGCTCATGGCTCCTGCAACAGCAACAAGACAGAAGCTCAAAGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp CATCCACATTCCCTAGGTAAGTCTTCCCTATACCCGCTGCCCTGGGTCCAGCTGCAGCATCCATGGCCATaGCCGTCAGATAAATCAGCC +
Preference number: 4 (lower is better)
Translates to: HPHSLGKSSLYPLPWVQLQHPWP*PSDKSA
Trigger: GGCTGATTTATCTGACGGTCATGGCCATGGATGCTG...CAGCTGGACCCAGGGCAGCGGGTATAGGGAAGACTTACCTAGGGAATGTGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp CCCAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCCAGCATCCATGGCCATaGCCGTCAGATAAATCAGCC +
Preference number: 4 (lower is better)
Translates to: PSLSSSWDYRYLTPHLAIQHPWP*PSDKSA
Trigger: GGCTGATTTATCTGACGGTCATGGCCATGGATGCTG...GATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp CTCCAGGTGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTAGTAGGCGGGCTTGCTaGAGGTGGGAGGGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: LQVPKPSMEKLPNGKGSLSRRAC*RWEGCH
Trigger: ATGACAACCCTCCCACCTTCAGCAAGCCCGCCTACT...AAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCACCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp CTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGAGTAGGCGGGCTTGCTaGAGGTGGGAGGGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: LSSSWDYRYLTPHLAISRSRRAC*RWEGCH
Trigger: ATGACAACCCTCCCACCTTCAGCAAGCCCGCCTACT...CCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp ATGAACCTTGGTAGATGCTCCCCGTCCCTGCAACCAACAGGTTCAGGAGGTCCCCCACTGCGCGAACGATaGGGATGTATTCAGACTTGG +
Preference number: 4 (lower is better)
Translates to: MNLGRCSPSLQPTGSGGPPLRER*GCIQTW
Trigger: CCAAGTCTGAATACATCCTCATCGTTCGCGCAGTGG...GGGACCTCCTGAACCTGTTGGTTGCAGGGACGGGGAGCATCTACCAAGGTTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR TCA 90 bp CTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGCGGGGGCCTCATCGTTaGTGTCCTCCACGTACACAA +
Preference number: 4 (lower is better)
Translates to: LSSSWDYRYLTPHLAISRRGPHR*CPPRTQ
Trigger: TTGTGTACGTGGAGGACATCAACGATGAGGCCCCCG...CCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp CTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGTGTACTGCTGCTGTGTaGACACGGGGGCCTCATCGT +
Preference number: 4 (lower is better)
Translates to: LSSSWDYRYLTPHLAISRCTAAV*TRGPHR
Trigger: ACGATGAGGCCCCCGTGTTCACACAGCAGCAGTACA...CCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp GGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGATCTGAGCAGCTGATGCGGTGGCATTTGGCACACTaGCAGAGCGCTCTGGTAGGT +
Preference number: 4 (lower is better)
Translates to: GQMLNERLAKVGSEQLMRWHLAH*QSALVG
Trigger: ACCTACCAGAGCGCTCTGTCAGTGTGCCAAATGCCA...CCGCATCAGCTGCTCAGATCCCACTTTTGCCAGACGCTCATTCAGCATCTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp GAATGCTTGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCACGGCTGCCACAGCAATaGGTGTGGTCCCAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: ECLFIDIDFLVHVGMPPPRLPQQ*VWSQGW
Trigger: CCACCCCTGGGACCACACTCATTGCTGTGGCAGCCG...TGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACAAGCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp GGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGATCTGAGCAGCTGATGCGGCCACCACGGTCAGACTaGACTTCTCGTAGGACTGCA +
Preference number: 4 (lower is better)
Translates to: GQMLNERLAKVGSEQLMRPPRSD*TSRRTA
Trigger: TGCAGTCCTACGAGAAGTTCAGTCTGACCGTGGTGG...CCGCATCAGCTGCTCAGATCCCACTTTTGCCAGACGCTCATTCAGCATCTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp TGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCACCTGGACGCGGGATCTCCTCTCTaGTGTGGAGGATGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: CSLTLTFLSTWGCHLHLDAGSPL*CGGWCR
Trigger: ACGGCACCATCCTCCACATCAGAGAGGAGATCCCGC...GTCCAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp TGGATAAGCAGTTCTGTCTGCGCAAAGTTCACCCGGCCCTTCTTGTCCACATGGGTGGTGGCTGGTCGTTaGTGTCCTCTAGCACAACGC +
Preference number: 4 (lower is better)
Translates to: WISSSVCAKFTRPFLSTWVVAGR*CPLAQR
Trigger: GCGTTGTGCTAGAGGACATCAACGACCAGCCACCAC...CCATGTGGACAAGAAGGGCCGGGTGAACTTTGCGCAGACAGAACTGCTTATCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp TGGATAAGCAGTTCTGTCTGCGCAAAGTTCACCCGGCCCTTCTTGTCCACATGGGGATGTAGATGCCGATaGTGGCCGTGTCGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: WISSSVCAKFTRPFLSTWGCRCR*WPCRCG
Trigger: GCCACAACGACACGGCCATCATCGGCATCTACATCC...CCATGTGGACAAGAAGGGCCGGGTGAACTTTGCGCAGACAGAACTGCTTATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CCTGGGCTGTGGTCTCCTGGCTCCTCGTCCAGCTCAGTCTGTATCAGCTTGATTCAGCCACAATGGCCTTaGGCTTCCTCTTGTGTACAG +
Preference number: 4 (lower is better)
Translates to: PGLWSPGSSSSSVCISLIQPQWP*ASSCVQ
Trigger: CTGTACACAAGAGGAAGCTCAAGGCCATTGTGGCTG...AATCAAGCTGATACAGACTGAGCTGGACGAGGAGCCAGGAGACCACAGCCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647092.1
CDS-3UTR TCA 90 bp TCTACCTGTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAAGACAGAATCCCAAACCCTTaGCCTCTCCTCACAACGCGA +
Preference number: 4 (lower is better)
Translates to: STCRSSCFRDRCCRLQEDRIPNP*PLLTTR
Trigger: TCGCGTTGTGAGGAGAGGTCAAGGGTTTGGGATTCT...GTCTTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp TACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAGAGCCTCGCCTCGGGCTCTaGTCTCCGCCGGATCGGCCC +
Preference number: 4 (lower is better)
Translates to: YRYLTPHLAISRTFYDKEPRLGL*SPPDRP
Trigger: GGGCCGATCCGGCGGAGAGCAGAGCCCGAGGCGAGG...CTCTTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp CAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAGTGTCAGGCTCCACTaGAAAGAAGCGAGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: QPLKQLGLQVPNTTLGHLSVRLH*KEARGL
Trigger: GAGGCCTCTCGCTTCTTTGCAGTGGAGCCTGACACT...GAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp AAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTCTCTGTCCAGTGGCTaGCGGAGCCACACCACGCCA +
Preference number: 4 (lower is better)
Translates to: KQLGLQVPNTTLGHLKDISLSSG*RSHTTP
Trigger: TGGCGTGGTGTGGCTCCGGCAGCCACTGGACAGAGA...AATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp CTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCATCTGGGCCGGCAAAGCCGACCTGTaGCAGCTCAGTGATGGCCAC +
Preference number: 4 (lower is better)
Translates to: LLDERLLVKRCALVVIWAGKADL*QLSDGH
Trigger: GTGGCCATCACTGAGCTGGCACAGGTCGGCTTTGCC...GGCCCAGATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp TGTCTTAGAATAGAAGCCCCTTCCCCATTCTCAGACGGTGTAATTCAGGCGGGGGGCAAAGCCGACCTGTaGCAGCTCAGTGATGGCCAC +
Preference number: 4 (lower is better)
Translates to: CLRIEAPSPFSDGVIQAGGKADL*QLSDGH
Trigger: GTGGCCATCACTGAGCTGGCACAGGTCGGCTTTGCC...CCCCGCCTGAATTACACCGTCTGAGAATGGGGAAGGGGCTTCTATTCTAAGACA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS-3UTR GCA 90 bp TCCAGGTGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTTGGAGTCTTCATCTGTTaGCCGGAGCCGCACCAGCTG +
Preference number: 4 (lower is better)
Translates to: SRCQSPAWRSCQMAKVPFGVFIC*PEPHQL
Trigger: CAGCTGGTGCGGCTCCGGGCAACAGATGAAGACTCC...AAAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCACCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp AATCATGGGGCCTTACCTCCCTCTAGAATGAACCTTGGTAGATGCTCCCCGTCCCAGCACCGTGGCTCCTaGCATGATGTTCTCCACCAC +
Preference number: 4 (lower is better)
Translates to: NHGALPPSRMNLGRCSPSQHRGS*HDVLHH
Trigger: GTGGTGGAGAACATCATGGCAGGAGCCACGGTGCTG...GGACGGGGAGCATCTACCAAGGTTCATTCTAGAGGGAGGTAAGGCCCCATGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR GCA 90 bp AAAAACATGGCAAGGACCCAACTAAACACACCCGTGGGCCCCCAGTTTGCAGCTTGCTGTACACCAGGGTaGCATTCTCCCCCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: KNMARTQLNTPVGPQFAACCTPG*HSPPGL
Trigger: CAGACCTGGGGGAGAATGGCACCCTGGTGTACAGCA...AGCTGCAAACTGGGGGCCCACGGGTGTGTTTAGTTGGGTCCTTGCCATGTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp CATCCACATTCCCTAGGTAAGTCTTCCCTATACCCGCTGCCCTGGGTCCAGCTGCAGAGACGACGATTTTaGGCATCAGCTCGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: HPHSLGKSSLYPLPWVQLQRRRF*ASARPH
Trigger: ATGAGGCCGAGCTGATGCGCAAAATCGTCGTCTCTG...CAGCTGGACCCAGGGCAGCGGGTATAGGGAAGACTTACCTAGGGAATGTGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp CAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTACTTGGTGGGCGTGCCTaGATCACTGGCCACCACCCG +
Preference number: 4 (lower is better)
Translates to: QLGLQVPNTTLGHLKDILLGGRA*ITGHHP
Trigger: CGGGTGGTGGCCAGTGATGCAGGCACGCCCACCAAG...TAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp CTGCGGCCTCTTACCATCCATAACTCGTTCCTGGCCACAGAGCAAGTTATTGACAGCTCTTGGTGGGCGTaGCTGCATCACTGGCCACCA +
Preference number: 4 (lower is better)
Translates to: LRPLTIHNSFLATEQVIDSSWWA*LHHWPP
Trigger: TGGTGGCCAGTGATGCAGGCACGCCCACCAAGAGCT...GTCAATAACTTGCTCTGTGGCCAGGAACGAGTTATGGATGGTAAGAGGCCGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp CAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTGAAGTAGCTGAGCTCTaGATTGAGGCCCACGTCGTT +
Preference number: 4 (lower is better)
Translates to: QQRGMWRKCSETWTGVGCEVAEL*IEAHVV
Trigger: AACGACGTGGGCCTCAATGCAGAGCTCAGCTACTTC...ACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp AGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTCTGCGCCCGACAGGATaGGGTAGTTCACCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: SSWDYRYLTPHLAISRTFLRPTG*GSSPGH
Trigger: GTGGCCTGGTGAACTACCGCATCCTGTCGGGCGCAG...AAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp GGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGATCTGAGCAGCTGATGCGGGTTGAAGGTGAGGCGTaGATTGCAGCCACTGTCAGC +
Preference number: 4 (lower is better)
Translates to: GQMLNERLAKVGSEQLMRVEGEA*IAATVS
Trigger: GCTGACAGTGGCTGCAATGCACGCCTCACCTTCAAC...CCGCATCAGCTGCTCAGATCCCACTTTTGCCAGACGCTCATTCAGCATCTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp AACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGACAGGGATCTCAGCTaGCCGGGGCGGGGACCCGTT +
Preference number: 4 (lower is better)
Translates to: NRREHQSLLFISWAHIWEDRDLS*PGRGPV
Trigger: AACGGGTCCCCGCCCCGGGCAGCTGAGATCCCTGTC...TTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp AGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGCCAGTAGGCTGTACACCGCCTaGGACTCGCGGTCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: REHQSLLFISWAHIWEASRLYTA*DSRSRR
Trigger: GCGCCTGGACCGCGAGTCGCAGGCGGTGTACAGCCT...ACTGGCTTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp AGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGCCAGTCTGCGCCTGTCACGTTaGCCACGAGGGTGCCGCGTG +
Preference number: 4 (lower is better)
Translates to: REHQSLLFISWAHIWEASLRLSR*PRGCRV
Trigger: CACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAG...ACTGGCTTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp CTCAAAGACAGCCTCCTGGTAGGAGGGCTGGTCAAAGATGGGGTTGTTGTCATTGTCGGTGGCCACCCCTaGAGTGTACTCAGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: LKDSLLVGGLVKDGVVVIVGGHP*SVLSLG
Trigger: ACCAAGGCTGAGTACACTGCAGGGGTGGCCACCGAC...AATGACAACAACCCCATCTTTGACCAGCCCTCCTACCAGGAGGCTGTCTTTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp TTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCAGTGGATGGCCAGAATaGTGTAGAAGACAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: FGLFQLSLSQAGPQTLGPSGWPE*CRRQGC
Trigger: ACAGCCTTGTCTTCTACAGCATTCTGGCCATCCACT...GGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp TGGACGTCCAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGATAAGCAGTTCTGTCTaGGCAAAGTTCACCCGGCCC +
Preference number: 4 (lower is better)
Translates to: WTSSREGCGGNVARLGLEISSSV*AKFTRP
Trigger: GGGCCGGGTGAACTTTGCGCAGACAGAACTGCTTAT...CTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTGGACGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp ATGAACTCCTCCTCGAAGCCGCGCACACGGTCGGGGATCTCGTTAATGACGATCATAAGCAGTTCTGTCTaGGCAAAGTTCACCCGGCCC +
Preference number: 4 (lower is better)
Translates to: MNSSSKPRTRSGISLMTIISSSV*AKFTRP
Trigger: GGGCCGGGTGAACTTTGCGCAGACAGAACTGCTTAT...GATCGTCATTAACGAGATCCCCGACCGTGTGCGCGGCTTCGAGGAGGAGTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp TGGACGTCCAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGATCAGGCTTGACAGCTaGTGGCTCACGCCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: WTSSREGCGGNVARLGLEIRLDS*WLTPKS
Trigger: ACTTTTGGGCGTGAGCCAGCAGCTGTCAAGCCTGAT...CTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTGGACGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp TGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCACCTGGACATTCTGTGCGGGCGTTaGGCTCGAAGGCAGTGGCCT +
Preference number: 4 (lower is better)
Translates to: CSLTLTFLSTWGCHLHLDILCGR*ARRQWP
Trigger: AGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAAT...GTCCAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp GATTGGCCCCTCACGAATGATCTGGCCCAGCTTGGCAATGTTGTCATACTCCTGATTTGGCGGATTCTGTaGGGGCGTTGCGCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: DWPLTNDLAQLGNVVILLIWRIL*GRCARR
Trigger: CCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAAT...CAGGAGTATGACAACATTGCCAAGCTGGGCCAGATCATTCGTGAGGGGCCAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp AGGTGGGAATTCTCAACAGGTCCCCAAGGAAGGATGAGGCCACATTCCTCCAAGGATGCTCCCCGTCCCTaGAACCAACAGGTTCAGGAG +
Preference number: 4 (lower is better)
Translates to: RWEFSTGPQGRMRPHSSKDAPRP*NQQVQE
Trigger: CTCCTGAACCTGTTGGTTGCAGGGACGGGGAGCATC...CTTGGAGGAATGTGGCCTCATCCTTCCTTGGGGACCTGTTGAGAATTCCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR GCA 90 bp AGGCACCACCAGAGGCTAAAGCCCAACAGTAGAGCCCTGACCTCTTTTCCACCCATGAACCTTGGTAGATaGTCCCCGTCCCTGCAACCA +
Preference number: 4 (lower is better)
Translates to: RHHQRLKPNSRALTSFPPMNLGR*SPSLQP
Trigger: TGGTTGCAGGGACGGGGAGCATCTACCAAGGTTCAT...GGGTGGAAAAGAGGTCAGGGCTCTACTGTTGGGCTTTAGCCTCTGGTGGTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR GCA 90 bp CTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGGATTGGAAGAAATGGTaGTCCCTGCCCCCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: LSSSWDYRYLTPHLAISRDWKKW*SLPPAP
Trigger: AGGGGCTGGGGGCAGGGAGCACCATTTCTTCCAATC...CCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp CTGCGGCCTCTTACCATCCATAACTCGTTCCTGGCCACAGAGCAAGTTATTGACCTCTGTTCTGGGCCTTaGTGGGCCCTGGCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: LRPLTIHNSFLATEQVIDLCSGP*WALALF
Trigger: GAAGAGAGCCAGGGCCCAGCAAGGCCCAGAACAGAG...GTCAATAACTTGCTCTGTGGCCAGGAACGAGTTATGGATGGTAAGAGGCCGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp CTTAGACTTGTGATGTCTCTGGACCTTGCTGTCTTAACCTGTGATGTGGCCATGGCCTCCTGGTCCCGATaGAGGGAGGGGAGCATTGCC +
Preference number: 4 (lower is better)
Translates to: LRLVMSLDLAVLTCDVAMASWSR*REGSIA
Trigger: GGCAATGCTCCCCTCCCTGCATCGGGACCAGGAGGC...CATGGCCACATCACAGGTTAAGACAGCAAGGTCCAGAGACATCACAAGTCTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp ATGCGGACAGGCCACCGCCCTCTTGTCTGCATGGCAGATGGGCACAGGGTGGAAACTAACTGTGGCTTATaGTTCACACACACCCACTCT +
Preference number: 4 (lower is better)
Translates to: MRTGHRPLVCMADGHRVETNCGL*FTHTHS
Trigger: AGAGTGGGTGTGTGTGAAGCATAAGCCACAGTTAGT...TTCCACCCTGTGCCCATCTGCCATGCAGACAAGAGGGCGGTGGCCTGTCCGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp AGAAGGAAAAGTCCAGGAGGGGGAGGGCTCTCAATTGGGTTTCAGGCACCAGGCTGCAGACCCCCTCGCTaGTGCTTGATGAAAGACTTC +
Preference number: 4 (lower is better)
Translates to: RRKSPGGGGLSIGFQAPGCRPPR*CLMKDF
Trigger: GAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCTGCA...GCCTGGTGCCTGAAACCCAATTGAGAGCCCTCCCCCTCCTGGACTTTTCCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp AAAAACATGGCAAGGACCCAACTAAACACACCCGTGGGCCCCCAGTTTGCAGCTTGCTTCAGAGACCGGTaGTGCAGGCTGCAGGAAGAC +
Preference number: 4 (lower is better)
Translates to: KNMARTQLNTPVGPQFAACFRDR*CRLQED
Trigger: GTCTTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCA...AGCTGCAAACTGGGGGCCCACGGGTGTGTTTAGTTGGGTCCTTGCCATGTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp TCTACCTGTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAAGACGCCCAGCTCCATCACTaGTCAGCTGTGTGTACACTT +
Preference number: 4 (lower is better)
Translates to: STCRSSCFRDRCCRLQEDAQLHH*SAVCTL
Trigger: AAGTGTACACACAGCTGAGCAGTGATGGAGCTGGGC...GTCTTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp CTGCCTTTGAGCTTCTGTCTTGTTGCTGTTGCAGGAGCCATGAGCACAGAGGGCGGGAGCAAGTTGGACTaGATGGGGAAGCAGTCACAG +
Preference number: 4 (lower is better)
Translates to: LPLSFCLVAVAGAMSTEGGSKLD*MGKQSQ
Trigger: CTGTGACTGCTTCCCCATGCAGTCCAACTTGCTCCC...GCCCTCTGTGCTCATGGCTCCTGCAACAGCAACAAGACAGAAGCTCAAAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp GACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAGCCGGGGGCTCGGACTaGGCGCGCCCCAAACGTCCA +
Preference number: 4 (lower is better)
Translates to: DYRYLTPHLAISRTFYDKAGGSD*ARPKRP
Trigger: TGGACGTTTGGGGCGCGCCCAGTCCGAGCCCCCGGC...TTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp AGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTCAGCTGGTGGCAACATaGCGCCCCATGGCTCCGTGT +
Preference number: 4 (lower is better)
Translates to: SSWDYRYLTPHLAISRTFQLVAT*RPMAPC
Trigger: ACACGGAGCCATGGGGCGCCATGTTGCCACCAGCTG...AAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp CAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTACCACGTGGCAGCTGGTaGCAACATGGCGCCCCATGG +
Preference number: 4 (lower is better)
Translates to: QLGLQVPNTTLGHLKDILPRGSW*QHGAPW
Trigger: CCATGGGGCGCCATGTTGCCACCAGCTGCCACGTGG...TAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp TCTACCTGTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAAGACTCTTGGGCCAGCAACTaGGTCACAGAAGAACCCACA +
Preference number: 4 (lower is better)
Translates to: STCRSSCFRDRCCRLQEDSWASN*VTEEPT
Trigger: TGTGGGTTCTTCTGTGACCCAGTTGCTGGCCCAAGA...GTCTTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp AGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTGGTCTCTCTGTCCAGTaGCTGCCGGAGCCACACCAC +
Preference number: 4 (lower is better)
Translates to: SSWDYRYLTPHLAISRTFGLSVQ*LPEPHH
Trigger: GTGGTGTGGCTCCGGCAGCCACTGGACAGAGAGACC...AAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp CTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGGTGATCACCCCCTGGTaGTCGCTGACAGAGAACTCC +
Preference number: 4 (lower is better)
Translates to: LSSSWDYRYLTPHLAISRVITPW*SLTENS
Trigger: GGAGTTCTCTGTCAGCGACCACCAGGGGGTGATCAC...CCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp AAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTCGCGGGCGCTGTCAATaGCGAAGAATTGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: KQLGLQVPNTTLGHLKDIRGRCQ*RRIGRG
Trigger: CCCCCTCCCAATTCTTCGCCATTGACAGCGCCCGCG...AATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp CTGCGGCCTCTTACCATCCATAACTCGTTCCTGGCCACAGAGCAAGTTATTGACGCTGGTAGGCCTGTGTaGTCTCGTAGTCCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: LRPLTIHNSFLATEQVIDAGRPV*SRSPAP
Trigger: GGGAGCTGGACTACGAGACCACACAGGCCTACCAGC...GTCAATAACTTGCTCTGTGGCCAGGAACGAGTTATGGATGGTAAGAGGCCGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp CATCCACATTCCCTAGGTAAGTCTTCCCTATACCCGCTGCCCTGGGTCCAGCTGTCCTTGTCCACCACCTaGATGAAGAGTGGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: HPHSLGKSSLYPLPWVQLSLSTT*MKSGRA
Trigger: TGCCCTTCCACTCTTCATCCAGGTGGTGGACAAGGA...CAGCTGGACCCAGGGCAGCGGGTATAGGGAAGACTTACCTAGGGAATGTGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CCCCAAGGAAGGATGAGGCCACATTCCTCCAAGTCACTGCTCTGTCACCCAGACCGTAGTCCAGTGGGATaGCCACCCGAATACGAATGT +
Preference number: 4 (lower is better)
Translates to: PQGRMRPHSSKSLLCHPDRSPVG*PPEYEC
Trigger: ACATTCGTATTCGGGTGGCCATCCCACTGGACTACG...GTCTGGGTGACAGAGCAGTGACTTGGAGGAATGTGGCCTCATCCTTCCTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp ATTGATTTGAAAATGCGGACAGGCCACCGCCCTCTTGTCTGCATGGCAGATGGGGGTCTCGTAGTCCAGTaGGATGGCCACCCGAATACG +
Preference number: 4 (lower is better)
Translates to: IDLKMRTGHRPLVCMADGGLVVQ*DGHPNT
Trigger: CGTATTCGGGTGGCCATCCCACTGGACTACGAGACC...CCCATCTGCCATGCAGACAAGAGGGCGGTGGCCTGTCCGCATTTTCAAATCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp GGGAGTGGGGCTCAGGGCTCCTCCCTAGGAATCATGGGGCCTTACCTCCCTCTACAGGCACACTCTCATTaGCAAAGAGATCAAAGTCGT +
Preference number: 4 (lower is better)
Translates to: GSGAQGSSLGIMGPYLPLQAHSH*QRDQSR
Trigger: ACGACTTTGATCTCTTTGCCAATGAGAGTGTGCCTG...TAGAGGGAGGTAAGGCCCCATGATTCCTAGGGAGGAGCCCTGAGCCCCACTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp GGGCATTTCCAGCAGCTGGAGGTGATGCCACCTGGACTCGGAGGAGGACAGCTCCAGGCACACTCTCATTaGCAAAGAGATCAAAGTCGT +
Preference number: 4 (lower is better)
Translates to: GHFQQLEVMPPGLGGGQLQAHSH*QRDQSR
Trigger: ACGACTTTGATCTCTTTGCCAATGAGAGTGTGCCTG...GAGCTGTCCTCCTCCGAGTCCAGGTGGCATCACCTCCAGCTGCTGGAAATGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp CATCCACATTCCCTAGGTAAGTCTTCCCTATACCCGCTGCCCTGGGTCCAGCTGATGTTGTACAGTGGCTaGCTGAAGATGGGCCGGTTG +
Preference number: 4 (lower is better)
Translates to: HPHSLGKSSLYPLPWVQLMLYSG*LKMGRL
Trigger: CAACCGGCCCATCTTCAGCCAGCCACTGTACAACAT...CAGCTGGACCCAGGGCAGCGGGTATAGGGAAGACTTACCTAGGGAATGTGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp AGGACCCAACTAAACACACCCGTGGGCCCCCAGTTTGCAGCTTTGGTATTAGATGCGATGCCAGTTTTCTaGTTGTGGCCCACACCCCCG +
Preference number: 4 (lower is better)
Translates to: RTQLNTPVGPQFAALVLDAMPVF*LWPTPP
Trigger: CGGGGGTGTGGGCCACAACCAGAAAACTGGCATCGC...ATCTAATACCAAAGCTGCAAACTGGGGGCCCACGGGTGTGTTTAGTTGGGTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCGGTCACATCAGAGTCTaGAGGGGTCATCTCCACCAG +
Preference number: 4 (lower is better)
Translates to: QPLKQLGLQVPNTTLGHLGHIRV*RGHLHQ
Trigger: CTGGTGGAGATGACCCCTCCAGACTCTGATGTGACC...GAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp GAATGCTTGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCACCAGCATGGCGTGGGTaGTGCGGATCTTGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: ECLFIDIDFLVHVGMPPPPAWRG*CGSCPW
Trigger: CCACGGGCAAGATCCGCACCACCCACGCCATGCTGG...TGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACAAGCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp CTTAGACTTGTGATGTCTCTGGACCTTGCTGTCTTAACCTGTGATGTGGCCATGCGGTCCAGCATGGCGTaGGTGGTGCGGATCTTGCCC +
Preference number: 4 (lower is better)
Translates to: LRLVMSLDLAVLTCDVAMRSSMA*VVRILP
Trigger: GGGCAAGATCCGCACCACCCACGCCATGCTGGACCG...CATGGCCACATCACAGGTTAAGACAGCAAGGTCCAGAGACATCACAAGTCTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CTAAACAGGTGGGAATTCTCAACAGGTCCCCAAGGAAGGATGAGGCCACATTCCACACTGTGGCACTGCTaGTGGCTTTCAGAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: LNRWEFSTGPQGRMRPHSTLWHC*WLSEGA
Trigger: GGCCCCCTCTGAAAGCCACCAGCAGTGCCACAGTGT...GGAATGTGGCCTCATCCTTCCTTGGGGACCTGTTGAGAATTCCCACCTGTTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp AGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTCCACCACTTGGTAGATaGAGACCCCCGCCGGGATGC +
Preference number: 4 (lower is better)
Translates to: SSWDYRYLTPHLAISRTFPPLGR*RPPPGC
Trigger: GCATCCCGGCGGGGGTCTCCATCTACCAAGTGGTGG...AAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp CAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCCCTCATCGAGGTCGATaGCCACCACTTGGTAGATGG +
Preference number: 4 (lower is better)
Translates to: QPLKQLGLQVPNTTLGHLPHRGR*PPLGRW
Trigger: CCATCTACCAAGTGGTGGCCATCGACCTCGATGAGG...GAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp CTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCATCTGGGCCTGGTGGAGCTCTTGGTaGGCGTGCCTGCATCACTGG +
Preference number: 4 (lower is better)
Translates to: LLDERLLVKRCALVVIWAWWSSW*ACLHHW
Trigger: CCAGTGATGCAGGCACGCCCACCAAGAGCTCCACCA...GGCCCAGATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp TCCAGGTGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTTTGCTGGTGGAGCTCTTaGTGGGCGTGCCTGCATCAC +
Preference number: 4 (lower is better)
Translates to: SRCQSPAWRSCQMAKVPFCWWSS*WACLHH
Trigger: GTGATGCAGGCACGCCCACCAAGAGCTCCACCAGCA...AAAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCACCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CTAAACAGGTGGGAATTCTCAACAGGTCCCCAAGGAAGGATGAGGCCACATTCCCGGCCGGGAAGAAGGTaGGCGTCTCGTCGTTCACAT +
Preference number: 4 (lower is better)
Translates to: LNRWEFSTGPQGRMRPHSRPGRR*ASRRSH
Trigger: ATGTGAACGACGAGACGCCCACCTTCTTCCCGGCCG...GGAATGTGGCCTCATCCTTCCTTGGGGACCTGTTGAGAATTCCCACCTGTTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp GTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAAGACAGTGGCCTGCTCTGCAGAAAGATaGGCCGGTTGTCATTCACAT +
Preference number: 4 (lower is better)
Translates to: VDPPASETGAAGCRKTVACSAER*AGCHSH
Trigger: ATGTGAATGACAACCGGCCCATCTTTCTGCAGAGCA...GGCCACTGTCTTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCCCTCATCTGCGTCCGTaGCTTTCAGCTGCAAGATGC +
Preference number: 4 (lower is better)
Translates to: QPLKQLGLQVPNTTLGHLPHLRP*LSAARC
Trigger: GCATCTTGCAGCTGAAAGCCACGGACGCAGATGAGG...GAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616684.4
CDS-3UTR CCA 90 bp AGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAGCGGGGCCTGGTCAGTaGCCGACACATTCATCATGT +
Preference number: 4 (lower is better)
Translates to: SLSSSWDYRYLTPHLAISAGPGQ*PTHSSC
Trigger: ACATGATGAATGTGTCGGCCACTGACCAGGCCCCGC...TGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp CAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTAACGCTGCAGAAGCCCTaGTTGAAGGGCGGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: QLGLQVPNTTLGHLKDILTLQKP*LKGGAW
Trigger: CCAGGCCCCGCCCTTCAACCAGGGCTTCTGCAGCGT...TAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp CAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTCCAGATTCTCCAGGATaGCAGCCTCGTATGAGGCAT +
Preference number: 4 (lower is better)
Translates to: QQRGMWRKCSETWTGVGCPDSPG*QPRMRH
Trigger: ATGCCTCATACGAGGCTGCCATCCTGGAGAATCTGG...ACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp TGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCACCTGGACCCTCGTCCTCCACAGTaGCCACCAGGTGGTAGAAGC +
Preference number: 4 (lower is better)
Translates to: CSLTLTFLSTWGCHLHLDPRPPQ*PPGGRS
Trigger: GCTTCTACCACCTGGTGGCCACTGTGGAGGACGAGG...GTCCAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp TGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCACCTGGACGGCGGTGGGATAAGATaGGGCACTGGTCTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: CSLTLTFLSTWGCHLHLDGGGIR*GTGLWQ
Trigger: CTGCCACAGACCAGTGCCCCATCTTATCCCACCGCC...GTCCAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTCCGGCCAGCTGTCCTTCACAGAAATaGTCAGCTTGTACTCTGGGA +
Preference number: 4 (lower is better)
Translates to: GMWRKCSETWTGVGCPASCPSQK*SACTLG
Trigger: TCCCAGAGTACAAGCTGACCATTTCTGTGAAGGACA...GCTGGCCGGACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp AGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGCCAGTGTGTGGTCCCAGGGGTaGCCCCCTCCAGGATCCGCT +
Preference number: 4 (lower is better)
Translates to: REHQSLLFISWAHIWEASVWSQG*PPPGSA
Trigger: AGCGGATCCTGGAGGGGGCCACCCCTGGGACCACAC...ACTGGCTTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp GAGGAAGAGAGAAGAGGGTTAACATCAGTTAGTTCAGGGTGCAGCAGGGATGGAGGTGGTGCCCCAGAGTaGGGGCTCTCCACCATCTGT +
Preference number: 4 (lower is better)
Translates to: EEERRGLTSVSSGCSRDGGGAPE*GLSTIC
Trigger: ACAGATGGTGGAGAGCCCCCACTCTGGGGCACCACC...TCCATCCCTGCTGCACCCTGAACTAACTGATGTTAACCCTCTTCTCTCTTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642965.1
CDS-3UTR CCA 90 bp GATTGGCCCCTCACGAATGATCTGGCCCAGCTTGGCAATGTTGTCATACTCCTGCTGCATAGTCTCGTATaGCACTGGCTGGCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: DWPLTNDLAQLGNVVILLLHSLV*HWLAQV
Trigger: GACCTGGGCCAGCCAGTGCCATACGAGACTATGCAG...CAGGAGTATGACAACATTGCCAAGCTGGGCCAGATCATTCGTGAGGGGCCAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCACCTGGACGTCAGCAGCTGGTACTaGGGGCTGCCTTTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: CSLTLTFLSTWGCHLHLDVSSWY*GLPFGG
Trigger: GCCTCCAAAAGGCAGCCCCCAGTACCAGCTGCTGAC...GTCCAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp GAATGCTTGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCAAACCAGGTCGAGGGTTaGGGAGGGTCCACGGGGAGG +
Preference number: 4 (lower is better)
Translates to: ECLFIDIDFLVHVGMPPPNQVEG*GGSTGR
Trigger: CCTCCCCGTGGACCCTCCCCAACCCTCGACCTGGTT...TGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACAAGCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp GGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGATCTGAGCAGCTGATGCGGAGCCTTGGTGAAGCGTaGTGGCTGGTCGTTGATGTC +
Preference number: 4 (lower is better)
Translates to: GQMLNERLAKVGSEQLMRSLGEA*WLVVDV
Trigger: GACATCAACGACCAGCCACCACGCTTCACCAAGGCT...CCGCATCAGCTGCTCAGATCCCACTTTTGCCAGACGCTCATTCAGCATCTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GAATGCTTGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCAACTCTGAGCCCACCTTaGCGTCGGTGGCCACCCCTG +
Preference number: 4 (lower is better)
Translates to: ECLFIDIDFLVHVGMPPPTLSPP*RRWPPL
Trigger: CAGGGGTGGCCACCGACGCCAAGGTGGGCTCAGAGT...TGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACAAGCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGCCCTTCTTGTCCACATaGAACTGCACATTGTCAGTA +
Preference number: 4 (lower is better)
Translates to: WEGGGPVWPLSAQPEPSWPFLST*NCTLSV
Trigger: TACTGACAATGTGCAGTTCCATGTGGACAAGAAGGG...CCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp ACTGAATTTTCGCGACGGTTGCTGGCTACATCCCCAGGGTTGTCTTTGGCCAAGCGTCCAGGATGCGGTTaGTATCGCGGTTCACCACGT +
Preference number: 4 (lower is better)
Translates to: TEFSRRLLATSPGLSLAKRPGCG*YRGSPR
Trigger: ACGTGGTGAACCGCGATACCAACCGCATCCTGGACG...CTTGGCCAAAGACAACCCTGGGGATGTAGCCAGCAACCGTCGCGAAAATTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTTTCTCATCGATCATCTaGATCACCCGGTCCACGTCC +
Preference number: 4 (lower is better)
Translates to: QQRGMWRKCSETWTGVGCFSSII*ITRSTS
Trigger: GGACGTGGACCGGGTGATCCAGATGATCGATGAGAA...ACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp CCTGGGCTGTGGTCTCCTGGCTCCTCGTCCAGCTCAGTCTGTATCAGCTTGATTCCAGCCACACAGGGTTaGCTCCATCAAAGGAGTACT +
Preference number: 4 (lower is better)
Translates to: PGLWSPGSSSSSVCISLIPATQG*LHQRST
Trigger: AGTACTCCTTTGATGGAGCCAACCCTGTGTGGCTGG...AATCAAGCTGATACAGACTGAGCTGGACGAGGAGCCAGGAGACCACAGCCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647092.1
CDS-3UTR CCA 90 bp TCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGGAAGCCAGTGAAATaGAGAGAATGCTTGTTCATT +
Preference number: 4 (lower is better)
Translates to: SEQLMRAARAKPRLSPRPGKPVK*RECLFI
Trigger: AATGAACAAGCATTCTCTCCATTTCACTGGCTTCCC...AGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp AGGCACCACCAGAGGCTAAAGCCCAACAGTAGAGCCCTGACCTCTTTTCCACCCCAGCTGCAAAGCCCTTaGGAAGAGCCAGGAGCAAAT +
Preference number: 4 (lower is better)
Translates to: RHHQRLKPNSRALTSFPPQLQSP*EEPGAN
Trigger: ATTTGCTCCTGGCTCTTCCCAAGGGCTTTGCAGCTG...GGGTGGAAAAGAGGTCAGGGCTCTACTGTTGGGCTTTAGCCTCTGGTGGTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp TCTACCTGTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAAGACTTTCTCCCTGAGAAATaGGAGAACTCAGGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: STCRSSCFRDRCCRLQEDFLPEK*ENSGLP
Trigger: GGGCAGCCCTGAGTTCTCCCATTTCTCAGGGAGAAA...GTCTTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp ATTGATTTGAAAATGCGGACAGGCCACCGCCCTCTTGTCTGCATGGCAGATGGGGCCAAGACACTGTCCTaGCATCTGTGCTGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: IDLKMRTGHRPLVCMADGAKTLS*HLCWPS
Trigger: ACTGGGCCAGCACAGATGCCAGGACAGTGTCTTGGC...CCCATCTGCCATGCAGACAAGAGGGCGGTGGCCTGTCCGCATTTTCAAATCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CCGAGGACAACCGCAGCCACTGTGACTACATGGAATCTACCAAGATGTAATGGGGGTCATCTGGGCCTTTaGCCTGAGGCTCCACAGGGT +
Preference number: 4 (lower is better)
Translates to: PRTTAATVTTWNLPRCNGGHLGL*PEAPQG
Trigger: ACCCTGTGGAGCCTCAGGCCAAAGGCCCAGATGACC...CCCATTACATCTTGGTAGATTCCATGTAGTCACAGTGGCTGCGGTTGTCCTCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp TGTCCACAAACATGCCCCCACATCCCCCTAGGTCTACCTGTAGATCCTCCTGCTAGAGATGTGCACTCGTaGTCATCTGGGCCTTTGGCC +
Preference number: 4 (lower is better)
Translates to: CPQTCPHIPLGLPVDPPARDVHS*SSGPLA
Trigger: GGCCAAAGGCCCAGATGACCACGAGTGCACATCTCT...AGCAGGAGGATCTACAGGTAGACCTAGGGGGATGTGGGGGCATGTTTGTGGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp GTGGCCATGATGCTGTCCAGTTTAACAGTGCCTTGCCCCCATCCACATTCCCTAGCTGCAGGAAGACAGTaGCCCAAGCAGTCTGGGACA +
Preference number: 4 (lower is better)
Translates to: VAMMLSSLTVPCPHPHSLAAGRQ*PKQSGT
Trigger: TGTCCCAGACTGCTTGGGCCACTGTCTTCCTGCAGC...TAGGGAATGTGGATGGGGGCAAGGCACTGTTAAACTGGACAGCATCATGGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp GTGGCCATGATGCTGTCCAGTTTAACAGTGCCTTGCCCCCATCCACATTCCCTACTATACCCGCTGCCCTaGGTCCAGCTGATCTGCCTT +
Preference number: 4 (lower is better)
Translates to: VAMMLSSLTVPCPHPHSLLYPLP*VQLICL
Trigger: AAGGCAGATCAGCTGGACCCAGGGCAGCGGGTATAG...TAGGGAATGTGGATGGGGGCAAGGCACTGTTAAACTGGACAGCATCATGGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp TCCACAAACATGCCCCCACATCCCCCTAGGTCTACCTGTAGATCCTCCTGCTTCCATTGGCTCACAATGTaGCCTTGGCCTTCCCACCAC +
Preference number: 4 (lower is better)
Translates to: STNMPPHPPRSTCRSSCFHWLTM*PWPSHH
Trigger: GTGGTGGGAAGGCCAAGGCCACATTGTGAGCCAATG...GAAGCAGGAGGATCTACAGGTAGACCTAGGGGGATGTGGGGGCATGTTTGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp CCTAGGTCTACCTGTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGCCAAAAGCTCAGCCTaGTTTTCCATCGACAAGGAC +
Preference number: 4 (lower is better)
Translates to: PRSTCRSSCFRDRCCRLQAKSSA*FSIDKD
Trigger: GTCCTTGTCGATGGAAAACCAGGCTGAGCTTTTGGC...CTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGACCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp GCAATGTTGTCATACTCCTGGATGGCAGCCCGCAGGTATCGGTCATCATCAGGCAAGTGGAAGCCCATTTaGAGTGGAGAGCTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: AMLSYSWMAARRYRSSSGKWKPI*SGELRG
Trigger: GCCCCTGAGCTCTCCACTCCAAATGGGCTTCCACTT...GCCTGATGATGACCGATACCTGCGGGCTGCCATCCAGGAGTATGACAACATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR CAA 72 bp TTCAGGGCACCCACGTTGGGATCAATCAGGAAGGGATaGAAGATGATCGAGGAGGCTCCCTTCAGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: FRAPTLGSIRKG*KMIEEAPFRGQ
Trigger: CTGGCCTCTGAAGGGAGCCTCCTCGATCATCTTCAATCCCTTCCTGATTGATCCCAACGTGGGTGCCCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CAA 72 bp GAGCACCTTCCTCTCTGCAGACCCCCTCGCTGCTGCTaGATGAAAGACTTCTGGTCAAGAGATGTGCACTCG +
Preference number: 4 (lower is better)
Translates to: EHLPLCRPPRCC*MKDFWSRDVHS
Trigger: CGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCTGCAGAGAGGAAGGTGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR CAA 72 bp GGCTCATTCTCATACACGCTTGTGCTGAACTGGGGCTaGGAGAACTGTGGCCGGCAGTCATTGACATCCAGC +
Preference number: 4 (lower is better)
Translates to: GSFSYTLVLNWG*ENCGRQSLTSS
Trigger: GCTGGATGTCAATGACTGCCGGCCACAGTTCTCCAAGCCCCAGTTCAGCACAAGCGTGTATGAGAATGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CAA 72 bp CAGCTCAGAGATGGAGGAGTGGCAGGAGGAGGCTTTTaGCACCATCCGCTGTGCAAAGAGCTTTTTGAGCCG +
Preference number: 4 (lower is better)
Translates to: QLRDGGVAGGGF*HHPLCKELFEP
Trigger: CGGCTCAAAAAGCTCTTTGCACAGCGGATGGTGCAAAAAGCCTCCTCCTGCCACTCCTCCATCTCTGAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642965.1
CDS-3UTR TCA 90 bp CTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGCTCCACGGTGAACTCTaGCTTGGTCTCTCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: LSSSWDYRYLTPHLAISRLHGEL*LGLSVQ
Trigger: CTGGACAGAGAGACCAAGTCAGAGTTCACCGTGGAG...CCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp GGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGATCTGAGCAGCTGATGCGGCAGAGAACTCCACGGTaGACTCTGACTTGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: GQMLNERLAKVGSEQLMRQRTPR*TLTWSL
Trigger: GAGAGACCAAGTCAGAGTTCACCGTGGAGTTCTCTG...CCGCATCAGCTGCTCAGATCCCACTTTTGCCAGACGCTCATTCAGCATCTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp ACCCGTGGGCCCCCAGTTTGCAGCTTTGGTATTAGATTACTGCTAGGGACCCTGCAGAGAACTCCACGGTaGACTCTGACTTGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: TRGPPVCSFGIRLLLGTLQRTPR*TLTWSL
Trigger: GAGAGACCAAGTCAGAGTTCACCGTGGAGTTCTCTG...CAGGGTCCCTAGCAGTAATCTAATACCAAAGCTGCAAACTGGGGGCCCACGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR TCA 90 bp AACAGGTCCCCAAGGAAGGATGAGGCCACATTCCTCCAAGTCACTGCTCTGTCATGTCCACCACCTGGATaGAGAGTGGAAGGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: NRSPRKDEATFLQVTALSCPPPG*RVEGQS
Trigger: GCTTTGCCCTTCCACTCTTCATCCAGGTGGTGGACA...TGACAGAGCAGTGACTTGGAGGAATGTGGCCTCATCCTTCCTTGGGGACCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR TCA 90 bp AGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCATGTACAGTGGCTGGCTaGAGATGGGCCGGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: SLSSSWDYRYLTPHLAISCTVAG*RWAGCH
Trigger: ATGACAACCGGCCCATCTTCAGCCAGCCACTGTACA...TGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp CTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGCGTTCTCGTACAGGCTaGTGTTGTACAGTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LSSSWDYRYLTPHLAISRRSRTG*CCTVAG
Trigger: GCCAGCCACTGTACAACATCAGCCTGTACGAGAACG...CCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp TCCACAAACATGCCCCCACATCCCCCTAGGTCTACCTGTAGATCCTCCTGCTTCTCATCTCCACCAGGTTaGTGTAGTAGGGTGCGTCCT +
Preference number: 4 (lower is better)
Translates to: STNMPPHPPRSTCRSSCFSSPPG*CSRVRP
Trigger: AGGACGCACCCTACTACATCAACCTGGTGGAGATGA...GAAGCAGGAGGATCTACAGGTAGACCTAGGGGGATGTGGGGGCATGTTTGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp AGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCATGCCCGTGGTGCTGTTaGGGCTGTAGAACTTGTTGG +
Preference number: 4 (lower is better)
Translates to: SLSSSWDYRYLTPHLAISCPWCC*GCRTCW
Trigger: CCAACAAGTTCTACAGCCTCAACAGCACCACGGGCA...TGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp AGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCATTGGACCACGATGACTaGCGTTCCAATGCCTGCGGT +
Preference number: 4 (lower is better)
Translates to: SLSSSWDYRYLTPHLAISLDHDD*RSNACG
Trigger: ACCGCAGGCATTGGAACGTCAGTCATCGTGGTCCAA...TGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp AGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCATGGCTTGGACCACGATaGCTGACGTTCCAATGCCTG +
Preference number: 4 (lower is better)
Translates to: SLSSSWDYRYLTPHLAISWLGPR*LTFQCL
Trigger: CAGGCATTGGAACGTCAGTCATCGTGGTCCAAGCCA...TGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp GGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTCCGGCCAGCTTACAGATCCTGTGTTaGTATTCACAGCAAAGGCGT +
Preference number: 4 (lower is better)
Translates to: GMWRKCSETWTGVGCPASLQILC*YSQQRR
Trigger: ACGCCTTTGCTGTGAATATCAACACAGGATCTGTAA...GCTGGCCGGACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp AGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGCCAGTCGGCTGCCACAGCAATaGGTGTGGTCCCAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: REHQSLLFISWAHIWEASRLPQQ*VWSQGW
Trigger: CCACCCCTGGGACCACACTCATTGCTGTGGCAGCCG...ACTGGCTTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp GAGGAAGAGAGAAGAGGGTTAACATCAGTTAGTTCAGGGTGCAGCAGGGATGGACTGTCCGGTTGGCAATaGCCTTCCCTGCCGAGGAGT +
Preference number: 4 (lower is better)
Translates to: EEERRGLTSVSSGCSRDGLSGWQ*PSLPRS
Trigger: ACTCCTCGGCAGGGAAGGTCATTGCCAACCGGACAG...TCCATCCCTGCTGCACCCTGAACTAACTGATGTTAACCCTCTTCTCTCTTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642965.1
CDS-3UTR TCA 90 bp GGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGATCTGAGCAGCTGATGCGGGAGTGCAAAGTTGCCTaGGTCAGCATCAGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: GQMLNERLAKVGSEQLMRECKVA*VSISGS
Trigger: ACTGCCACTGATGCTGACTCAGGCAACTTTGCACTC...CCGCATCAGCTGCTCAGATCCCACTTTTGCCAGACGCTCATTCAGCATCTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp TCATCAGGCTTGACAGCTGCTGGCTCACGCCCAAAAGTTCCATGGGTGCGCGTGCAAGGCTGTACTCAATaGGTGCAAAGTTGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: SSGLTAAGSRPKVPWVRVQGCTQ*VQSCLS
Trigger: ACTCAGGCAACTTTGCACTCATTGAGTACAGCCTTG...CACGCGCACCCATGGAACTTTTGGGCGTGAGCCAGCAGCTGTCAAGCCTGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp GATTGGCCCCTCACGAATGATCTGGCCCAGCTTGGCAATGTTGTCATACTCCTGCCACCACGGTCAGACTaGACTTCTCGTAGGACTGCA +
Preference number: 4 (lower is better)
Translates to: DWPLTNDLAQLGNVVILLPPRSD*TSRRTA
Trigger: TGCAGTCCTACGAGAAGTTCAGTCTGACCGTGGTGG...CAGGAGTATGACAACATTGCCAAGCTGGGCCAGATCATTCGTGAGGGGCCAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp TGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCACCTGGACCGTTGCCGGCTGCGATaGAGTAGTACACGATCGCGT +
Preference number: 4 (lower is better)
Translates to: CSLTLTFLSTWGCHLHLDRCRLR*SSTRSR
Trigger: ACGCGATCGTGTACTACTTCATCGCAGCCGGCAACG...GTCCAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp GTAGCTGCTCCTTGTTCTCATCGATCATCTGGATCACCCGGTCCACGTCCAGGAAGGTCAGATGCTGAATaGGCGTCTGGCAAAAGTGGG +
Preference number: 4 (lower is better)
Translates to: VAAPCSHRSSGSPGPRPGRSDAE*ASGKSG
Trigger: CCCACTTTTGCCAGACGCTCATTCAGCATCTGACCT...TCCTGGACGTGGACCGGGTGATCCAGATGATCGATGAGAACAAGGAGCAGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp TGGACGTCCAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGGTAGAGGTCAGATGCTaGATGAGCGTCTGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: WTSSREGCGGNVARLGLEVEVRC*MSVWQK
Trigger: CTTTTGCCAGACGCTCATTCAGCATCTGACCTCTAC...CTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTGGACGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp ATGAGGATTGATTTGAAAATGCGGACAGGCCACCGCCCTCTTGTCTGCATGGCATCCAGCCCCTCACTTTaGCTCCCCAGTTCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: MRIDLKMRTGHRPLVCMASSPSL*LPSSVH
Trigger: GTGCACAGAACTGGGGAGTCAAAGTGAGGGGCTGGA...TGCCATGCAGACAAGAGGGCGGTGGCCTGTCCGCATTTTCAAATCAATCCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR TCA 90 bp GCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTTAGTCAAGTCTGGGCCTTTGGCCTaGGGCTCCACAGGGTACAAC +
Preference number: 4 (lower is better)
Translates to: AKAQHGEVAKWQRFPLVKSGPLA*GSTGYN
Trigger: GTTGTACCCTGTGGAGCCTCAGGCCAAAGGCCCAGA...CTTGACTAAAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp TCCAGGTGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTTTGCCCTGGGTCCAGCTaGTCTGCCTTTGAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: SRCQSPAWRSCQMAKVPFCPGSS*SAFELL
Trigger: CAGAAGCTCAAAGGCAGATCAGCTGGACCCAGGGCA...AAAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCACCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp GACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAGGCTCATCCGCGGCGTaGCGGCAGCTCCTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: DYRYLTPHLAISRTFYDKGSSAA*RQLLGL
Trigger: GAGACCCAGGAGCTGCCGGCACGCCGCGGATGAGCC...TTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp CTCCAGGTGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTAGTGTCAGGCTCCACTaGAAAGAAGCGAGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: LQVPKPSMEKLPNGKGSLSVRLH*KEARGL
Trigger: GAGGCCTCTCGCTTCTTTGCAGTGGAGCCTGACACT...AAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCACCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp AGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGTGTCAGGCTCCACTaGAAAGAAGCGAGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: SLSSSWDYRYLTPHLAISSVRLH*KEARGL
Trigger: GAGGCCTCTCGCTTCTTTGCAGTGGAGCCTGACACT...TGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp CAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCGTGTATTCTCAGGGATaGGGACGCTGTAGGGCTGAT +
Preference number: 4 (lower is better)
Translates to: QPLKQLGLQVPNTTLGHLVYSQG*GRCRAD
Trigger: ATCAGCCCTACAGCGTCCGCATCCCTGAGAATACAC...GAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp AAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGGAGTAGAGGACGCTaGCCCCTGCCCCCAAGTCGG +
Preference number: 4 (lower is better)
Translates to: KPEGTSVTSVYKLGTHLGRSRGR*PLPPSR
Trigger: CCGACTTGGGGGCAGGGGGCAGCGTCCTCTACTCCT...TCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGAGTACACCTCAAACATaGTGTTCAGGCCCAAATTCT +
Preference number: 4 (lower is better)
Translates to: WEGGGPVWPLSAQPEPSWSTPQT*CSGPNS
Trigger: AGAATTTGGGCCTGAACAGCATGTTTGAGGTGTACT...CCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp AAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTGGAGTCTTCATCTGTTaGCCGGAGCCGCACCAGCTG +
Preference number: 4 (lower is better)
Translates to: KQLGLQVPNTTLGHLKDIGVFIC*PEPHQL
Trigger: CAGCTGGTGCGGCTCCGGGCAACAGATGAAGACTCC...AATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp AGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTGGAGTCTTCATCTGTTaGCCGGAGCCGCACCAGCTG +
Preference number: 4 (lower is better)
Translates to: SSWDYRYLTPHLAISRTFGVFIC*PEPHQL
Trigger: CAGCTGGTGCGGCTCCGGGCAACAGATGAAGACTCC...AAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp CTCGGGAGGCACCACCAGAGGCTAAAGCCCAACAGTAGAGCCCTGACCTCTTTTGCTGCCAAAGGCAGATaGACTGACAATGCTGTAGGT +
Preference number: 4 (lower is better)
Translates to: LGRHHQRLKPNSRALTSFAAKGR*TDNAVG
Trigger: ACCTACAGCATTGTCAGTGCATCTGCCTTTGGCAGC...AAAAGAGGTCAGGGCTCTACTGTTGGGCTTTAGCCTCTGGTGGTGCCTCCCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR GCA 90 bp ATGAGGATTGATTTGAAAATGCGGACAGGCCACCGCCCTCTTGTCTGCATGGCACAGCACCGTGGCTCCTaGCATGATGTTCTCCACCAC +
Preference number: 4 (lower is better)
Translates to: MRIDLKMRTGHRPLVCMAQHRGS*HDVLHH
Trigger: GTGGTGGAGAACATCATGGCAGGAGCCACGGTGCTG...TGCCATGCAGACAAGAGGGCGGTGGCCTGTCCGCATTTTCAAATCAATCCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp AGAAGGAAAAGTCCAGGAGGGGGAGGGCTCTCAATTGGGTTTCAGGCACCAGGCTGTTTACGGTGGCGATaGCAGTTTTCTGGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: RRKSPGGGGLSIGFQAPGCLRWR*QFSGCG
Trigger: GCCACAACCAGAAAACTGGCATCGCCACCGTAAACA...GCCTGGTGCCTGAAACCCAATTGAGAGCCCTCCCCCTCCTGGACTTTTCCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp AGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAGTTGATGTAGTAGGGTaGGTCCTTCCACGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: SLSSSWDYRYLTPHLAISVDVVG*VLPRGV
Trigger: CACCCCACGTGGAAGGACGCACCCTACTACATCAAC...TGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp TGGGAATTCTCAACAGGTCCCCAAGGAAGGATGAGGCCACATTCCTCCAAGTCATGCTGTACACCAGGGTaGCATTCTCCCCCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: WEFSTGPQGRMRPHSSKSCCTPG*HSPPGL
Trigger: CAGACCTGGGGGAGAATGGCACCCTGGTGTACAGCA...TGACTTGGAGGAATGTGGCCTCATCCTTCCTTGGGGACCTGTTGAGAATTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR GCA 90 bp GGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGATCTGAGCAGCTGATGCGGCAGAGACGACGATTTTaGGCATCAGCTCGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: GQMLNERLAKVGSEQLMRQRRRF*ASARPH
Trigger: ATGAGGCCGAGCTGATGCGCAAAATCGTCGTCTCTG...CCGCATCAGCTGCTCAGATCCCACTTTTGCCAGACGCTCATTCAGCATCTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp AAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGACCCCCGCCGGGATaGCTTCAAGCACCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: KPEGTSVTSVYKLGTHLGRPPPG*LQAPRP
Trigger: TGGCCGAGGTGCTTGAAGGCATCCCGGCGGGGGTCT...TCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp AGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGCCAGTGCATGCCCACCGGCATaGGGTAGGACACCAGGCCGT +
Preference number: 4 (lower is better)
Translates to: REHQSLLFISWAHIWEASACPPA*GRTPGR
Trigger: ACGGCCTGGTGTCCTACCGCATGCCGGTGGGCATGC...ACTGGCTTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp TCAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGCTGGTACTCCGCGATaGGCTCGCGGTCCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: SKPEGTSVTSVYKLGTHLAGTPR*ARGPAR
Trigger: CCGAGCTGGACCGCGAGCGCATCGCGGAGTACCAGC...CAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp AAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTCGAACACGGTGGCTGTaGCCGTGTGTCGCTTCCCTA +
Preference number: 4 (lower is better)
Translates to: KQLGLQVPNTTLGHLKDIRTRWL*PCVASL
Trigger: TAGGGAAGCGACACACGGGCACAGCCACCGTGTTCG...AATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp AGATCTTATGAAGGTAGAGGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGACCGACAGGGTTGGGGTaGCCTCGTCCTCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: RSYEGRGQMLNERLAKVGPTGLG*PRPPQW
Trigger: CCACTGTGGAGGACGAGGGCACCCCAACCCTGTCGG...TCCCACTTTTGCCAGACGCTCATTCAGCATCTGACCTCTACCTTCATAAGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp TCAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGACAGGGATCTCAGCTaGCCGGGGCGGGGACCCGTT +
Preference number: 4 (lower is better)
Translates to: SKPEGTSVTSVYKLGTHLDRDLS*PGRGPV
Trigger: AACGGGTCCCCGCCCCGGGCAGCTGAGATCCCTGTC...CAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp AACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAACGTTGCCCACGAGGGTaGCGCGTGGTGAGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: NRREHQSLLFISWAHIWERCPRG*RVVSAQ
Trigger: CTGAGCACTCACCACGCGGCACCCTCGTGGGCAACG...TTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp TGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCACCTGGACGGTCCACGTCCAGGATaGGGTTGGTATCGCGGTTCA +
Preference number: 4 (lower is better)
Translates to: CSLTLTFLSTWGCHLHLDGPRPG*GWYRGS
Trigger: TGAACCGCGATACCAACCGCATCCTGGACGTGGACC...GTCCAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp CTGAGGCTCTGGCAAGAAGAAAAGGTAGCAAAGTGGGCAAGGGAGGAGTGGAGGACGATGATCGCCATCTaGAGGGCAGACATGTCATCC +
Preference number: 4 (lower is better)
Translates to: LRLWQEEKVAKWAREEWRTMIAI*RADMSS
Trigger: GGATGACATGTCTGCCCTGCAGATGGCGATCATCGT...CCTCCACTCCTCCCTTGCCCACTTTGCTACCTTTTCTTCTTGCCAGAGCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642965.1
CDS-3UTR GCA 90 bp CCGGTCCAGAGAAGACAGCACATAGATGTCACCCGTGGTGGGGTTGATGGCAAACAGGAGGAGGCTTTTTaGACCATCCGCTGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: PVQRRQHIDVTRGGVDGKQEEAF*TIRCAK
Trigger: CTTTGCACAGCGGATGGTGCAAAAAGCCTCCTCCTG...TTTGCCATCAACCCCACCACGGGTGACATCTATGTGCTGTCTTCTCTGGACCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642965.1
CDS-3UTR GCA 90 bp AGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTGCGTCCGTGGCTGCCTaGAAGATGCTGTGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: SSWDYRYLTPHLAISRTFASVAA*KMLWPS
Trigger: TGAAGGCCACAGCATCTTGCAGGCAGCCACGGACGC...AAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398809.9
CDS-3UTR GCA 90 bp GCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTTAGTCAAGTCCTGGTGGAACAGATaGCTGGGTGCCAGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: AKAQHGEVAKWQRFPLVKSWWNR*LGASWE
Trigger: CTCCCAGCTGGCACCCAGGCATCTGTTCCACCAGGA...CTTGACTAAAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp CTCCATCACTGCTCAGCTGTGTGTACACTTAGACTTGTGATGTCTCTGGACCTTGGAGCTGGAGGTCAGTaGCCTGTCTACAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: LHHCSAVCTLRLVMSLDLGAGGQ*PVYRGQ
Trigger: CTGCCCCCTGTAGACAGGGCACTGACCTCCAGCTCC...AAGGTCCAGAGACATCACAAGTCTAAGTGTACACACAGCTGAGCAGTGATGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp GAATGCTTGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCAGGTCTCTCTGTCCAGTaGCTGCCGGAGCCACACCAC +
Preference number: 4 (lower is better)
Translates to: ECLFIDIDFLVHVGMPPPGLSVQ*LPEPHH
Trigger: GTGGTGTGGCTCCGGCAGCCACTGGACAGAGAGACC...TGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACAAGCATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp CTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCATCTGGGCCGTGATCACCCCCTGGTaGTCGCTGACAGAGAACTCC +
Preference number: 4 (lower is better)
Translates to: LLDERLLVKRCALVVIWAVITPW*SLTENS
Trigger: GGAGTTCTCTGTCAGCGACCACCAGGGGGTGATCAC...GGCCCAGATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp CTAAACAGGTGGGAATTCTCAACAGGTCCCCAAGGAAGGATGAGGCCACATTCCCGTGTGATCACCCCCTaGTGGTCGCTGACAGAGAAC +
Preference number: 4 (lower is better)
Translates to: LNRWEFSTGPQGRMRPHSRVITP*WSLTEN
Trigger: GTTCTCTGTCAGCGACCACCAGGGGGTGATCACACG...GGAATGTGGCCTCATCCTTCCTTGGGGACCTGTTGAGAATTCCCACCTGTTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp AGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTGCTGGTAGGCCTGTGTaGTCTCGTAGTCCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: SSWDYRYLTPHLAISRTFAGRPV*SRSPAP
Trigger: GGGAGCTGGACTACGAGACCACACAGGCCTACCAGC...AAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp AACAGGTCCCCAAGGAAGGATGAGGCCACATTCCTCCAAGTCACTGCTCTGTCAGGGTGGACAGAGGCCTaGTCTTGTCTTGATCTGTGG +
Preference number: 4 (lower is better)
Translates to: NRSPRKDEATFLQVTALSGWTEA*SCLDLW
Trigger: CCACAGATCAAGACAAGACCAGGCCTCTGTCCACCC...TGACAGAGCAGTGACTTGGAGGAATGTGGCCTCATCCTTCCTTGGGGACCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp CTCGGGAGGCACCACCAGAGGCTAAAGCCCAACAGTAGAGCCCTGACCTCTTTTGGACGTCCTTTATCCTaGTCTATGGCGGTGATGATG +
Preference number: 4 (lower is better)
Translates to: LGRHHQRLKPNSRALTSFGRPLS*SMAVMM
Trigger: CATCATCACCGCCATAGACCAGGATAAAGGACGTCC...AAAAGAGGTCAGGGCTCTACTGTTGGGCTTTAGCCTCTGGTGGTGCCTCCCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp TCTGCCTTTGAGCTTCTGTCTTGTTGCTGTTGCAGGAGCCATGAGCACAGAGGGGTCAGGATGAAGCCATaGCTGTACAGGGGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: SAFELLSCCCCRSHEHRGVRMKP*LYRGFS
Trigger: GGAGAACCCCCTGTACAGCCATGGCTTCATCCTGAC...CCCTCTGTGCTCATGGCTCCTGCAACAGCAACAAGACAGAAGCTCAAAGGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp TTCTCAACAGGTCCCCAAGGAAGGATGAGGCCACATTCCTCCAAGTCACTGCTCGACTGTAGCGTCAGATaGGGTGCGGTCATCGTTCAG +
Preference number: 4 (lower is better)
Translates to: FSTGPQGRMRPHSSKSLLDCSVR*GAVIVQ
Trigger: CTGAACGATGACCGCACCCCATCTGACGCTACAGTC...GAGCAGTGACTTGGAGGAATGTGGCCTCATCCTTCCTTGGGGACCTGTTGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp TTCTCAACAGGTCCCCAAGGAAGGATGAGGCCACATTCCTCCAAGTCACTGCTCCACCTGGATGAAGAGTaGAAGGGCAAAGCCGACCTG +
Preference number: 4 (lower is better)
Translates to: FSTGPQGRMRPHSSKSLLHLDEE*KGKADL
Trigger: CAGGTCGGCTTTGCCCTTCCACTCTTCATCCAGGTG...GAGCAGTGACTTGGAGGAATGTGGCCTCATCCTTCCTTGGGGACCTGTTGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp CAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCTCCTTGTCCACCACCTaGATGAAGAGTGGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: QPLKQLGLQVPNTTLGHLSLSTT*MKSGRA
Trigger: TGCCCTTCCACTCTTCATCCAGGTGGTGGACAAGGA...GAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp CCCAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCGAGATGATGAAGTGGTaGGAGTTGTTCCCCACCAAG +
Preference number: 4 (lower is better)
Translates to: PSLSSSWDYRYLTPHLAIEMMKW*ELFPTK
Trigger: CTTGGTGGGGAACAACTCCCACCACTTCATCATCTC...GATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp AACAGGTGGGAATTCTCAACAGGTCCCCAAGGAAGGATGAGGCCACATTCCTCCGGGGAGATGATGAAGTaGTGGGAGTTGTTCCCCACC +
Preference number: 4 (lower is better)
Translates to: NRWEFSTGPQGRMRPHSSGEMMK*WELFPT
Trigger: GGTGGGGAACAACTCCCACCACTTCATCATCTCCCC...GGAGGAATGTGGCCTCATCCTTCCTTGGGGACCTGTTGAGAATTCCCACCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp CTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCGATAAATCAGCCCATTaGATATCTGTTCATAATCCA +
Preference number: 4 (lower is better)
Translates to: LSAPVTPGTLAEATDPLPDKSAH*ISVHNP
Trigger: TGGATTATGAACAGATATCCAATGGGCTGATTTATC...GGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp TGTCCACAAACATGCCCCCACATCCCCCTAGGTCTACCTGTAGATCCTCCTGCTGCATTGATCCGAAACTaGGTGGAGCCTTCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: CPQTCPHIPLGLPVDPPAALIRN*VEPSKE
Trigger: CTCCTTGGAAGGCTCCACCCAGTTTCGGATCAATGC...AGCAGGAGGATCTACAGGTAGACCTAGGGGGATGTGGGGGCATGTTTGTGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp TGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCACCTGGACCCAGTTTTCTGGTTGTaGCCCACACCCCCGTCCACT +
Preference number: 4 (lower is better)
Translates to: CSLTLTFLSTWGCHLHLDPVFWL*PTPPST
Trigger: AGTGGACGGGGGTGTGGGCCACAACCAGAAAACTGG...GTCCAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp AAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTGCGATGCCAGTTTTCTaGTTGTGGCCCACACCCCCG +
Preference number: 4 (lower is better)
Translates to: KQLGLQVPNTTLGHLKDIAMPVF*LWPTPP
Trigger: CGGGGGTGTGGGCCACAACCAGAAAACTGGCATCGC...AATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp AGGTGGGAATTCTCAACAGGTCCCCAAGGAAGGATGAGGCCACATTCCTCCAAGGGTCACATCAGAGTCTaGAGGGGTCATCTCCACCAG +
Preference number: 4 (lower is better)
Translates to: RWEFSTGPQGRMRPHSSKGHIRV*RGHLHQ
Trigger: CTGGTGGAGATGACCCCTCCAGACTCTGATGTGACC...CTTGGAGGAATGTGGCCTCATCCTTCCTTGGGGACCTGTTGAGAATTCCCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp AGGTGGGAATTCTCAACAGGTCCCCAAGGAAGGATGAGGCCACATTCCTCCAAGCAACAGCCACCACCGTaGTCACATCAGAGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: RWEFSTGPQGRMRPHSSKQQPPP*SHQSLE
Trigger: CTCCAGACTCTGATGTGACCACGGTGGTGGCTGTTG...CTTGGAGGAATGTGGCCTCATCCTTCCTTGGGGACCTGTTGAGAATTCCCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp TCCAGGTGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTTATTCTCCCCCAGGTCTaGGTCAACAGCCACCACCGT +
Preference number: 4 (lower is better)
Translates to: SRCQSPAWRSCQMAKVPFILPQV*VNSHHR
Trigger: ACGGTGGTGGCTGTTGACCCAGACCTGGGGGAGAAT...AAAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCACCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp AGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTACACTGTGGCACTGCTaGTGGCTTTCAGAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: SSWDYRYLTPHLAISRTFTLWHC*WLSEGA
Trigger: GGCCCCCTCTGAAAGCCACCAGCAGTGCCACAGTGT...AAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp CTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGCCTCATCGAGGTCGATaGCCACCACTTGGTAGATGG +
Preference number: 4 (lower is better)
Translates to: LSSSWDYRYLTPHLAISRPHRGR*PPLGRW
Trigger: CCATCTACCAAGTGGTGGCCATCGACCTCGATGAGG...CCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp CGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCATCTCGGCCGGGAAGAAGGTaGGCGTCTCGTCGTTCACAT +
Preference number: 4 (lower is better)
Translates to: RCCLMKDFWSRDVHSWSSRPGRR*ASRRSH
Trigger: ATGTGAACGACGAGACGCCCACCTTCTTCCCGGCCG...AGATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTACACCCGGAACTCGCGTaGCACGTCCTCGGACACAGA +
Preference number: 4 (lower is better)
Translates to: QLGLQVPNTTLGHLKDILHPELA*HVLGHR
Trigger: TCTGTGTCCGAGGACGTGCCACGCGAGTTCCGGGTG...TAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp TGGACGTCCAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTTGCCATGGTTACCATaGAGGATGCGGTACCACACA +
Preference number: 4 (lower is better)
Translates to: WTSSREGCGGNVARLGLELPWLP*RMRYHT
Trigger: TGTGTGGTACCGCATCCTCCATGGTAACCATGGCAA...CTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTGGACGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp AGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGCCAGTACGCTGCAGAAGCCCTaGTTGAAGGGCGGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: REHQSLLFISWAHIWEASTLQKP*LKGGAW
Trigger: CCAGGCCCCGCCCTTCAACCAGGGCTTCTGCAGCGT...ACTGGCTTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGATCTGAGCAGCTGATGCGGCTCAGTGACTTCAAATaGTCCCTCATAGTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: GQMLNERLAKVGSEQLMRLSDFK*SLIVPG
Trigger: CCCCGGGACTATGAGGGACCATTTGAAGTCACTGAG...CCGCATCAGCTGCTCAGATCCCACTTTTGCCAGACGCTCATTCAGCATCTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp CCCGCCGGCTCATTCTCATACACGCTTGTGCTGAACTGGGGCTTGGAGAACTGTGCTCTGGTAGGTCGCTaGCATTGTCAATCACTGAGA +
Preference number: 4 (lower is better)
Translates to: PAGSFSYTLVLNWGLENCALVGR*HCQSLR
Trigger: TCTCAGTGATTGACAATGCCAGCGACCTACCAGAGC...ACAGTTCTCCAAGCCCCAGTTCAGCACAAGCGTGTATGAGAATGAGCCGGCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGATCTGAGCAGCTGATGCGGAGTCAGCTTGGCATTTaGCACACTGACAGAGCGCTC +
Preference number: 4 (lower is better)
Translates to: GQMLNERLAKVGSEQLMRSQLGI*HTDRAL
Trigger: GAGCGCTCTGTCAGTGTGCCAAATGCCAAGCTGACT...CCGCATCAGCTGCTCAGATCCCACTTTTGCCAGACGCTCATTCAGCATCTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp ACGGTCGGGGATCTCGTTAATGACGATCTTGACGCGCTGGTCGTCCCTCAGGATCCAAAGGGCTTGAACTaGGGCGTATTGTCATTGACG +
Preference number: 4 (lower is better)
Translates to: TVGDLVNDDLDALVVPQDPKGLN*GVLSLT
Trigger: CGTCAATGACAATACGCCCCAGTTCAAGCCCTTTGG...ATCCTGAGGGACGACCAGCGCGTCAAGATCGTCATTAACGAGATCCCCGACCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GTAGGCCATGAAGAGGTCGAAGGTGCGCAGAATGCCGTCCATGCTCCCCATGGTTTGACATCCAGCACTTaGATCACCACCTGCACTGAA +
Preference number: 4 (lower is better)
Translates to: VGHEEVEGAQNAVHAPHGLTSST*ITTCTE
Trigger: TTCAGTGCAGGTGGTGATCCAAGTGCTGGATGTCAA...ACCATGGGGAGCATGGACGGCATTCTGCGCACCTTCGACCTCTTCATGGCCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CCGGTCCAGAGAAGACAGCACATAGATGTCACCCGTGGTGGGGTTGATGGCAAATTGGGACCTTCATCCTaGTCAGTGGCCATCATGGTG +
Preference number: 4 (lower is better)
Translates to: PVQRRQHIDVTRGGVDGKLGPSS*SVAIMV
Trigger: CACCATGATGGCCACTGACCAGGATGAAGGTCCCAA...TTTGCCATCAACCCCACCACGGGTGACATCTATGTGCTGTCTTCTCTGGACCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp AACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAATCGTATGGCACTGGCTaGCCCAGGTCGCTGGCCACC +
Preference number: 4 (lower is better)
Translates to: NRREHQSLLFISWAHIWESYGTG*PRSLAT
Trigger: GGTGGCCAGCGACCTGGGCCAGCCAGTGCCATACGA...TTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp GAATGCTTGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCAAGTCTCGTATGGCACTaGCTGGCCCAGGTCGCTGGC +
Preference number: 4 (lower is better)
Translates to: ECLFIDIDFLVHVGMPPPSLVWH*LAQVAG
Trigger: GCCAGCGACCTGGGCCAGCCAGTGCCATACGAGACT...TGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACAAGCATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp TGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCACCTGGACCTGCATAGTCTCGTATaGCACTGGCTGGCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: CSLTLTFLSTWGCHLHLDLHSLV*HWLAQV
Trigger: GACCTGGGCCAGCCAGTGCCATACGAGACTATGCAG...GTCCAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp CCCGCCGGCTCATTCTCATACACGCTTGTGCTGAACTGGGGCTTGGAGAACTGTCCATCGGGCTGCAGATaGAAGTTCTTCTCTTCGTTG +
Preference number: 4 (lower is better)
Translates to: PAGSFSYTLVLNWGLENCPSGCR*KFFSSL
Trigger: CAACGAAGAGAAGAACTTCCATCTGCAGCCCGATGG...ACAGTTCTCCAAGCCCCAGTTCAGCACAAGCGTGTATGAGAATGAGCCGGCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GTGGATAAGCAGTTCTGTCTGCGCAAAGTTCACCCGGCCCTTCTTGTCCACATGCTTGGTGAAGCGTGGTaGCTGGTCGTTGATGTCCTC +
Preference number: 4 (lower is better)
Translates to: VDKQFCLRKVHPALLVHMLGEAW*LVVDVL
Trigger: GAGGACATCAACGACCAGCCACCACGCTTCACCAAG...CATGTGGACAAGAAGGGCCGGGTGAACTTTGCGCAGACAGAACTGCTTATCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGACTCTGAGCCCACCTTaGCGTCGGTGGCCACCCCTG +
Preference number: 4 (lower is better)
Translates to: QNRREHQSLLFISWAHIWTLSPP*RRWPPL
Trigger: CAGGGGTGGCCACCGACGCCAAGGTGGGCTCAGAGT...CCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp GTAGCTGCTCCTTGTTCTCATCGATCATCTGGATCACCCGGTCCACGTCCAGGACATCTTCAGAGTCGTTaGCAAGGGCCCGGAAGTAGT +
Preference number: 4 (lower is better)
Translates to: VAAPCSHRSSGSPGPRPGHLQSR*QGPGSS
Trigger: ACTACTTCCGGGCCCTTGCCAACGACTCTGAAGATG...TCCTGGACGTGGACCGGGTGATCCAGATGATCGATGAGAACAAGGAGCAGCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TGGACGTCCAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGATGTTGGAGAGCAGGTaGATGAACTCCTCCTCGAAG +
Preference number: 4 (lower is better)
Translates to: WTSSREGCGGNVARLGLEMLESR*MNSSSK
Trigger: CTTCGAGGAGGAGTTCATCCACCTGCTCTCCAACAT...CTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTGGACGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp CTCGTAGTCCACTGTCCGGTTGGCAATGACCTTCCCTGCCGAGGAGTCCTCCAGCCCTTCTTGTCCACATaGAACTGCACATTGTCAGTA +
Preference number: 4 (lower is better)
Translates to: LVVHCPVGNDLPCRGVLQPFLST*NCTLSV
Trigger: TACTGACAATGTGCAGTTCCATGTGGACAAGAAGGG...CTGGAGGACTCCTCGGCAGGGAAGGTCATTGCCAACCGGACAGTGGACTACGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGATCTGAGCAGCTGATGCGGTCGCGGTTCACCACGTaGATAAGCAGTTCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: GQMLNERLAKVGSEQLMRSRFTT*ISSSVC
Trigger: GCAGACAGAACTGCTTATCCACGTGGTGAACCGCGA...CCGCATCAGCTGCTCAGATCCCACTTTTGCCAGACGCTCATTCAGCATCTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCACCTGGACCGTCCAGGATGCGGTTaGTATCGCGGTTCACCACGT +
Preference number: 4 (lower is better)
Translates to: CSLTLTFLSTWGCHLHLDRPGCG*YRGSPR
Trigger: ACGTGGTGAACCGCGATACCAACCGCATCCTGGACG...GTCCAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp TGGATAAGCAGTTCTGTCTGCGCAAAGTTCACCCGGCCCTTCTTGTCCACATGGTGTCATACTCCTGGATaGCAGCCCGCAGGTATCGGT +
Preference number: 4 (lower is better)
Translates to: WISSSVCAKFTRPFLSTWCHTPG*QPAGIG
Trigger: ACCGATACCTGCGGGCTGCCATCCAGGAGTATGACA...CCATGTGGACAAGAAGGGCCGGGTGAACTTTGCGCAGACAGAACTGCTTATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp ACTGAATTTTCGCGACGGTTGCTGGCTACATCCCCAGGGTTGTCTTTGGCCAAGTGTCATACTCCTGGATaGCAGCCCGCAGGTATCGGT +
Preference number: 4 (lower is better)
Translates to: TEFSRRLLATSPGLSLAKCHTPG*QPAGIG
Trigger: ACCGATACCTGCGGGCTGCCATCCAGGAGTATGACA...CTTGGCCAAAGACAACCCTGGGGATGTAGCCAGCAACCGTCGCGAAAATTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TCAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGCCTGCCCTTGCTCCCTaGGAGGGGACGGTGGATGGG +
Preference number: 4 (lower is better)
Translates to: SKPEGTSVTSVYKLGTHLPALAP*EGTVDG
Trigger: CCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGG...CAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGGGGAAGCCAGTGAAATaGAGAGAATGCTTGTTCATT +
Preference number: 4 (lower is better)
Translates to: WEGGGPVWPLSAQPEPSWGKPVK*RECLFI
Trigger: AATGAACAAGCATTCTCTCCATTTCACTGGCTTCCC...CCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp ACCCGTGGGCCCCCAGTTTGCAGCTTTGGTATTAGATTACTGCTAGGGACCCTGTCCTGCAAGATGCTGTaGCCTTCAGGGATGTCCTCA +
Preference number: 4 (lower is better)
Translates to: TRGPPVCSFGIRLLLGTLSCKML*PSGMSS
Trigger: TGAGGACATCCCTGAAGGCCACAGCATCTTGCAGGA...CAGGGTCCCTAGCAGTAATCTAATACCAAAGCTGCAAACTGGGGGCCCACGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp ATGAGGATTGATTTGAAAATGCGGACAGGCCACCGCCCTCTTGTCTGCATGGCATCTGAAAGGCCCTTCTaGGTGGGGCGGGAGATATGC +
Preference number: 4 (lower is better)
Translates to: MRIDLKMRTGHRPLVCMASERPF*VGREIC
Trigger: GCATATCTCCCGCCCCACCCAGAAGGGCCTTTCAGA...TGCCATGCAGACAAGAGGGCGGTGGCCTGTCCGCATTTTCAAATCAATCCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp CTGCGGCCTCTTACCATCCATAACTCGTTCCTGGCCACAGAGCAAGTTATTGACGGGAGGGCTCTCAATTaGGTTTCAGGCACCAGGCCA +
Preference number: 4 (lower is better)
Translates to: LRPLTIHNSFLATEQVIDGRALN*VSGTRP
Trigger: TGGCCTGGTGCCTGAAACCCAATTGAGAGCCCTCCC...GTCAATAACTTGCTCTGTGGCCAGGAACGAGTTATGGATGGTAAGAGGCCGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp TGTCCACAAACATGCCCCCACATCCCCCTAGGTCTACCTGTAGATCCTCCTGCTTCAGGGCACCCACGTTaGGATCAATCAGGAAGGGAT +
Preference number: 4 (lower is better)
Translates to: CPQTCPHIPLGLPVDPPASGHPR*DQSGRD
Trigger: ATCCCTTCCTGATTGATCCCAACGTGGGTGCCCTGA...AGCAGGAGGATCTACAGGTAGACCTAGGGGGATGTGGGGGCATGTTTGTGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CTTAGACTTGTGATGTCTCTGGACCTTGCTGTCTTAACCTGTGATGTGGCCATGCGGGGCTCTCTTCCTTaGGTTTCCCGGGTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: LRLVMSLDLAVLTCDVAMRGSLP*VSRVLP
Trigger: TGGCAGCACCCGGGAAACCCAAGGAAGAGAGCCCCG...CATGGCCACATCACAGGTTAAGACAGCAAGGTCCAGAGACATCACAAGTCTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR CAA 72 bp CCCACCCCAGGATGGGCTTCTCAGAATCCCAAACCCTaGACCTCTCCTCACAACGCGAGGGTTAAACACTTT +
Preference number: 4 (lower is better)
Translates to: PTPGWASQNPKP*TSPHNARVKHF
Trigger: AAAGTGTTTAACCCTCGCGTTGTGAGGAGAGGTCAAGGGTTTGGGATTCTGAGAAGCCCATCCTGGGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CAA 72 bp ACTTGGATCACCACCTGCACTGAATTTTCGCGACGGTaGCTGGCTACATCCCCAGGGTTGTCTTTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: TWITTCTEFSRR*LATSPGLSLAK
Trigger: CTTGGCCAAAGACAACCCTGGGGATGTAGCCAGCAACCGTCGCGAAAATTCAGTGCAGGTGGTGATCCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp AGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCACAGGCGTGTCCTCGCTaGTCAGCAGGTATGTATCAA +
Preference number: 4 (lower is better)
Translates to: SLSSSWDYRYLTPHLAISQACPR*SAGMYQ
Trigger: TTGATACATACCTGCTGATCAGCGAGGACACGCCTG...TGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp CTAAACAGGTGGGAATTCTCAACAGGTCCCCAAGGAAGGATGAGGCCACATTCCCTCCACGGTGAACTCTaGCTTGGTCTCTCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: LNRWEFSTGPQGRMRPHSLHGEL*LGLSVQ
Trigger: CTGGACAGAGAGACCAAGTCAGAGTTCACCGTGGAG...GGAATGTGGCCTCATCCTTCCTTGGGGACCTGTTGAGAATTCCCACCTGTTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR TCA 90 bp AAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTCTGTGGCATTCACGATaGAGATGGGCGTCCCCACTG +
Preference number: 4 (lower is better)
Translates to: KQLGLQVPNTTLGHLKDILWHSR*RWASPL
Trigger: CAGTGGGGACGCCCATCTTCATCGTGAATGCCACAG...AATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp AGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCACAGCATCCATGGCCATaGCCGTCAGATAAATCAGCC +
Preference number: 4 (lower is better)
Translates to: SLSSSWDYRYLTPHLAISQHPWP*PSDKSA
Trigger: GGCTGATTTATCTGACGGTCATGGCCATGGATGCTG...TGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp AATCATGGGGCCTTACCTCCCTCTAGAATGAACCTTGGTAGATGCTCCCCGTCCCTTCCAAGGAGTAGATaGTGGACTCCTGGCCGTACT +
Preference number: 4 (lower is better)
Translates to: NHGALPPSRMNLGRCSPSLPRSR*WTPGRT
Trigger: AGTACGGCCAGGAGTCCATCATCTACTCCTTGGAAG...GGACGGGGAGCATCTACCAAGGTTCATTCTAGAGGGAGGTAAGGCCCCATGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR TCA 90 bp GTGGCCATGATGCTGTCCAGTTTAACAGTGCCTTGCCCCCATCCACATTCCCTACTTCCAAGGAGTAGATaGTGGACTCCTGGCCGTACT +
Preference number: 4 (lower is better)
Translates to: VAMMLSSLTVPCPHPHSLLPRSR*WTPGRT
Trigger: AGTACGGCCAGGAGTCCATCATCTACTCCTTGGAAG...TAGGGAATGTGGATGGGGGCAAGGCACTGTTAAACTGGACAGCATCATGGCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp AGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGCCAGTCCCCTGAGCGGGCATTaGTCCGAAACTGGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: REHQSLLFISWAHIWEASPLSGH*SETGWS
Trigger: GCTCCACCCAGTTTCGGATCAATGCCCGCTCAGGGG...ACTGGCTTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp AGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCACCACTGCGCGAACGATaGGGATGTATTCAGACTTGG +
Preference number: 4 (lower is better)
Translates to: SLSSSWDYRYLTPHLAISPLRER*GCIQTW
Trigger: CCAAGTCTGAATACATCCTCATCGTTCGCGCAGTGG...TGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp CCGAGGACAACCGCAGCCACTGTGACTACATGGAATCTACCAAGATGTAATGGGTGCCCGTGGTGCTGTTaGGGCTGTAGAACTTGTTGG +
Preference number: 4 (lower is better)
Translates to: PRTTAATVTTWNLPRCNGCPWCC*GCRTCW
Trigger: CCAACAAGTTCTACAGCCTCAACAGCACCACGGGCA...CCCATTACATCTTGGTAGATTCCATGTAGTCACAGTGGCTGCGGTTGTCCTCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp ATGAACCTTGGTAGATGCTCCCCGTCCCTGCAACCAACAGGTTCAGGAGGTCCCACAAAAGGCAGGTTCTaGAAGGTGGGGTCATTGTCA +
Preference number: 4 (lower is better)
Translates to: MNLGRCSPSLQPTGSGGPTKGRF*KVGSLS
Trigger: TGACAATGACCCCACCTTTCAGAACCTGCCTTTTGT...GGGACCTCCTGAACCTGTTGGTTGCAGGGACGGGGAGCATCTACCAAGGTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR TCA 90 bp TGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTTAGTCAACGCGGTAACCCACGCTaGACTTCCCATCCACGTTGC +
Preference number: 4 (lower is better)
Translates to: CQSPAWRSCQMAKVPFSQRGNPR*TSHPRC
Trigger: GCAACGTGGATGGGAAGTTCAGCGTGGGTTACCGCG...TTGACTAAAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp AGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATCGATGGCCTCCAGGATaGGCATGTAGGCGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: SWDYRYLTPHLAISRTFYRWPPG*ACRRLW
Trigger: CCACAGCCGCCTACATGCTCATCCTGGAGGCCATCG...ATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp AAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTCACATCCAGGACAGTaGCGAACACGGTGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: KQLGLQVPNTTLGHLKDISHPGQ*RTRWLC
Trigger: GCACAGCCACCGTGTTCGTCACTGTCCTGGATGTGA...AATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp AGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATCGTACACAATCACCCTaGCGGAGCTCCGCATGGGGC +
Preference number: 4 (lower is better)
Translates to: SWDYRYLTPHLAISRTFYRTQSP*RSSAWG
Trigger: GCCCCATGCGGAGCTCCGTCAGGGTGATTGTGTACG...ATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp CAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTGGCATTGTCAATCACTaGGAGAGTGACCTCATAGGT +
Preference number: 4 (lower is better)
Translates to: QQRGMWRKCSETWTGVGCGIVNH*ESDLIG
Trigger: ACCTATGAGGTCACTCTCTCAGTGATTGACAATGCC...ACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp TCAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGAGGGTGCCGCGTGGTaGGTGCTCAGGCACTGTCAG +
Preference number: 4 (lower is better)
Translates to: SKPEGTSVTSVYKLGTHLEGAAW*VLRHCQ
Trigger: CTGACAGTGCCTGAGCACTCACCACGCGGCACCCTC...CAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp AAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGACGGGGCTGTAGGCCATaGAGAGGTCGAAGGTGCGCA +
Preference number: 4 (lower is better)
Translates to: KPEGTSVTSVYKLGTHLGRGCRP*RGRRCA
Trigger: TGCGCACCTTCGACCTCTTCATGGCCTACAGCCCCG...TCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp GCAATGTTGTCATACTCCTGGATGGCAGCCCGCAGGTATCGGTCATCATCAGGCTGTAGTACCAGTTCATaGGGACAAAGAGCATGGCGG +
Preference number: 4 (lower is better)
Translates to: AMLSYSWMAARRYRSSSGCSTSS*GQRAWR
Trigger: CCGCCATGCTCTTTGTCCTCATGAACTGGTACTACA...GCCTGATGATGACCGATACCTGCGGGCTGCCATCCAGGAGTATGACAACATTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp ATTGATTTGAAAATGCGGACAGGCCACCGCCCTCTTGTCTGCATGGCAGATGGGCTTTCCGGGAAATTGTaGCGTCTCTTTCTCCCCGCT +
Preference number: 4 (lower is better)
Translates to: IDLKMRTGHRPLVCMADGLSGKL*RLFLPA
Trigger: AGCGGGGAGAAAGAGACGTCACAATTTCCCGGAAAG...CCCATCTGCCATGCAGACAAGAGGGCGGTGGCCTGTCCGCATTTTCAAATCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR TCA 90 bp TCTACCTGTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAAGACCTGTGCACAGAAGTATaGGGCTTCTGTGTACAGAGT +
Preference number: 4 (lower is better)
Translates to: STCRSSCFRDRCCRLQEDLCTEV*GFCVQS
Trigger: ACTCTGTACACAGAAGCCTCATACTTCTGTGCACAG...GTCTTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp AGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATTCTCTGTCCAGTGGCTaGCGGAGCCACACCACGCCA +
Preference number: 4 (lower is better)
Translates to: SWDYRYLTPHLAISRTFYSLSSG*RSHTTP
Trigger: TGGCGTGGTGTGGCTCCGGCAGCCACTGGACAGAGA...ATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp CTGCGGCCTCTTACCATCCATAACTCGTTCCTGGCCACAGAGCAAGTTATTGACCGATGGTGTAGCCAATaGCCCGGGGACGTCCTTTAT +
Preference number: 4 (lower is better)
Translates to: LRPLTIHNSFLATEQVIDRWCSQ*PGDVLY
Trigger: ATAAAGGACGTCCCCGGGGCATTGGCTACACCATCG...GTCAATAACTTGCTCTGTGGCCAGGAACGAGTTATGGATGGTAAGAGGCCGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp TGTCTTAGAATAGAAGCCCCTTCCCCATTCTCAGACGGTGTAATTCAGGCGGGGCGATGGTGTAGCCAATaGCCCGGGGACGTCCTTTAT +
Preference number: 4 (lower is better)
Translates to: CLRIEAPSPFSDGVIQAGRWCSQ*PGDVLY
Trigger: ATAAAGGACGTCCCCGGGGCATTGGCTACACCATCG...CCCCGCCTGAATTACACCGTCTGAGAATGGGGAAGGGGCTTCTATTCTAAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000646131.1
CDS-3UTR GCA 90 bp AGGATGAGGCCACATTCCTCCAAGTCACTGCTCTGTCACCCAGACTTGGGGCGGAGTCCAGGGCAAAGATaGTGTTGGTATTCCCTGAAA +
Preference number: 4 (lower is better)
Translates to: RMRPHSSKSLLCHPDLGRSPGQR*CWYSLK
Trigger: TTTCAGGGAATACCAACAGCATCTTTGCCCTGGACT...CCGCCCCAAGTCTGGGTGACAGAGCAGTGACTTGGAGGAATGTGGCCTCATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR GCA 90 bp AGGACCCAACTAAACACACCCGTGGGCCCCCAGTTTGCAGCTTTGGTATTAGATGTTGATGTAGTAGGGTaGGTCCTTCCACGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: RTQLNTPVGPQFAALVLDVDVVG*VLPRGV
Trigger: CACCCCACGTGGAAGGACGCACCCTACTACATCAAC...ATCTAATACCAAAGCTGCAAACTGGGGGCCCACGGGTGTGTTTAGTTGGGTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp AAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTGCTGTACACCAGGGTaGCATTCTCCCCCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: KQLGLQVPNTTLGHLKDICCTPG*HSPPGL
Trigger: CAGACCTGGGGGAGAATGGCACCCTGGTGTACAGCA...AATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp TGGGAATTCTCAACAGGTCCCCAAGGAAGGATGAGGCCACATTCCTCCAAGTCACAAACACTGTGGCACTaGTGGTGGCTTTCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: WEFSTGPQGRMRPHSSKSQTLWH*WWLSEG
Trigger: CCCCTCTGAAAGCCACCAGCAGTGCCACAGTGTTTG...TGACTTGGAGGAATGTGGCCTCATCCTTCCTTGGGGACCTGTTGAGAATTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR GCA 90 bp CCGAGGACAACCGCAGCCACTGTGACTACATGGAATCTACCAAGATGTAATGGGCAAACACTGTGGCACTaGTGGTGGCTTTCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: PRTTAATVTTWNLPRCNGQTLWH*WWLSEG
Trigger: CCCCTCTGAAAGCCACCAGCAGTGCCACAGTGTTTG...CCCATTACATCTTGGTAGATTCCATGTAGTCACAGTGGCTGCGGTTGTCCTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp AGGACCCAACTAAACACACCCGTGGGCCCCCAGTTTGCAGCTTTGGTATTAGATCAAACACTGTGGCACTaGTGGTGGCTTTCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: RTQLNTPVGPQFAALVLDQTLWH*WWLSEG
Trigger: CCCCTCTGAAAGCCACCAGCAGTGCCACAGTGTTTG...ATCTAATACCAAAGCTGCAAACTGGGGGCCCACGGGTGTGTTTAGTTGGGTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp GACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAGCTGGTACTCCGCGATaGGCTCGCGGTCCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: DYRYLTPHLAISRTFYDKAGTPR*ARGPAR
Trigger: CCGAGCTGGACCGCGAGCGCATCGCGGAGTACCAGC...TTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp CATAACTCGTTCCTGGCCACAGAGCAAGTTATTGACAGAGTTGGTCTTAAGTTTGCTGGTACTCCGCGATaGGCTCGCGGTCCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: HNSFLATEQVIDRVGLKFAGTPR*ARGPAR
Trigger: CCGAGCTGGACCGCGAGCGCATCGCGGAGTACCAGC...AAACTTAAGACCAACTCTGTCAATAACTTGCTCTGTGGCCAGGAACGAGTTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp CAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTACCACGTCGTTGTCCGTaGAGTTCAGCCAGACCACCC +
Preference number: 4 (lower is better)
Translates to: QLGLQVPNTTLGHLKDILPRRCP*SSARPP
Trigger: GGGTGGTCTGGCTGAACTGCACGGACAACGACGTGG...TAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp TGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTTAGTCAACCACGTCGTTGTCCGTaGAGTTCAGCCAGACCACCC +
Preference number: 4 (lower is better)
Translates to: CQSPAWRSCQMAKVPFSQPRRCP*SSARPP
Trigger: GGGTGGTCTGGCTGAACTGCACGGACAACGACGTGG...TTGACTAAAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp CTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGGAAGTAGCTGAGCTCTaGATTGAGGCCCACGTCGTT +
Preference number: 4 (lower is better)
Translates to: LSSSWDYRYLTPHLAISREVAEL*IEAHVV
Trigger: AACGACGTGGGCCTCAATGCAGAGCTCAGCTACTTC...CCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp TGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCACCTGGACGATGGGTGGCGAGAATaGCTCCCGGTCAATGATGAC +
Preference number: 4 (lower is better)
Translates to: CSLTLTFLSTWGCHLHLDDGWRE*LPVNDD
Trigger: GTCATCATTGACCGGGAGGCATTCTCGCCACCCATC...GTCCAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp GATTGGCCCCTCACGAATGATCTGGCCCAGCTTGGCAATGTTGTCATACTCCTGAATTTTCGCGACGGTTaGTGGCTACATCCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: DWPLTNDLAQLGNVVILLNFRDG*WLHPQG
Trigger: ACCCTGGGGATGTAGCCAGCAACCGTCGCGAAAATT...CAGGAGTATGACAACATTGCCAAGCTGGGCCAGATCATTCGTGAGGGGCCAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp AGATCTTATGAAGGTAGAGGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGATCCTCCAGGGCCACCTaGAGCGGCTGCATAGTCTCG +
Preference number: 4 (lower is better)
Translates to: RSYEGRGQMLNERLAKVGSSRAT*SGCIVS
Trigger: CGAGACTATGCAGCCGCTGCAGGTGGCCCTGGAGGA...TCCCACTTTTGCCAGACGCTCATTCAGCATCTGACCTCTACCTTCATAAGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp AGATCTTATGAAGGTAGAGGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGAGTGCCGCGTGGTGAGTaGTCAGGCACTGTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RSYEGRGQMLNERLAKVGVPRGE*SGTVSS
Trigger: GCTGCTGACAGTGCCTGAGCACTCACCACGCGGCAC...TCCCACTTTTGCCAGACGCTCATTCAGCATCTGACCTCTACCTTCATAAGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp CAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGAAGCGCAGGCTACCCTaGCCTGGGCTGTGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: QNRREHQSLLFISWAHIWKRRLP*PGLWSP
Trigger: AGGAGACCACAGCCCAGGGCAGGGTAGCCTGCGCTT...CCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp AACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGTGCCCGTGCTGCCGTaGACCACATGGATCCCATCG +
Preference number: 4 (lower is better)
Translates to: NRREHQSLLFISWAHIWEVPVLP*TTWIPS
Trigger: CGATGGGATCCATGTGGTGCACGGCAGCACGGGCAC...TTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp AGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGCCAGTGTGCCCGTGCTGCCGTaGACCACATGGATCCCATCG +
Preference number: 4 (lower is better)
Translates to: REHQSLLFISWAHIWEASVPVLP*TTWIPS
Trigger: CGATGGGATCCATGTGGTGCACGGCAGCACGGGCAC...ACTGGCTTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp AAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAGCAGCTGATGCGGGCTaGCAGGGCCAAGCCAAGGTT +
Preference number: 4 (lower is better)
Translates to: KPEGTSVTSVYKLGTHLGAADAG*QGQAKV
Trigger: AACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGC...TCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGGTGAAATGGAGAGAATaGTTGTTCATTGACATTGAC +
Preference number: 4 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQVKWRE*LFIDID
Trigger: GTCAATGTCAATGAACAAGCATTCTCTCCATTTCAC...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp GGATCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGGTGAAATGGAGAGAATaGTTGTTCATTGACATTGAC +
Preference number: 4 (lower is better)
Translates to: GSEQLMRAARAKPRLSPRVKWRE*LFIDID
Trigger: GTCAATGTCAATGAACAAGCATTCTCTCCATTTCAC...CCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp AGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATAGAAATGGTGCTCCCTaGCCCCAGCCCCTCACCGTG +
Preference number: 4 (lower is better)
Translates to: SWDYRYLTPHLAISRTFYRNGAP*PQPLTV
Trigger: CACGGTGAGGGGCTGGGGGCAGGGAGCACCATTTCT...ATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp AAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTGCTGGAGTGCAGTGGTaGAAACGCAGCTCACTGCAG +
Preference number: 4 (lower is better)
Translates to: KQLGLQVPNTTLGHLKDIAGVQW*KRSSLQ
Trigger: CTGCAGTGAGCTGCGTTTGCACCACTGCACTCCAGC...AATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp AGGACCCAACTAAACACACCCGTGGGCCCCCAGTTTGCAGCTTTGGTATTAGATACCTGTAGATCCTCCTaGTTCAGAGACCGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: RTQLNTPVGPQFAALVLDTCRSS*FRDRCC
Trigger: GCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGT...ATCTAATACCAAAGCTGCAAACTGGGGGCCCACGGGTGTGTTTAGTTGGGTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp ATGAGGATTGATTTGAAAATGCGGACAGGCCACCGCCCTCTTGTCTGCATGGCAACCTGTAGATCCTCCTaGTTCAGAGACCGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: MRIDLKMRTGHRPLVCMATCRSS*FRDRCC
Trigger: GCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGT...TGCCATGCAGACAAGAGGGCGGTGGCCTGTCCGCATTTTCAAATCAATCCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp CTGCCTTTGAGCTTCTGTCTTGTTGCTGTTGCAGGAGCCATGAGCACAGAGGGCCTGTCTTGTTGCTGTTaGAGGAGCCATGAGCACAGA +
Preference number: 4 (lower is better)
Translates to: LPLSFCLVAVAGAMSTEGLSCCC*RSHEHR
Trigger: TCTGTGCTCATGGCTCCTGCAACAGCAACAAGACAG...GCCCTCTGTGCTCATGGCTCCTGCAACAGCAACAAGACAGAAGCTCAAAGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp TGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTTAGTCAACACCGCCCTCTTGTCTaGATGGCAGATGGGCACAGG +
Preference number: 4 (lower is better)
Translates to: CQSPAWRSCQMAKVPFSQHRPLV*MADGHR
Trigger: CCTGTGCCCATCTGCCATGCAGACAAGAGGGCGGTG...TTGACTAAAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp AGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATCAGCTGGTGGCAACATaGCGCCCCATGGCTCCGTGT +
Preference number: 4 (lower is better)
Translates to: SWDYRYLTPHLAISRTFYQLVAT*RPMAPC
Trigger: ACACGGAGCCATGGGGCGCCATGTTGCCACCAGCTG...ATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp TCAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGAGGCCACGTGGCAGCTaGTGGCAACATGGCGCCCCA +
Preference number: 4 (lower is better)
Translates to: SKPEGTSVTSVYKLGTHLRPRGS*WQHGAP
Trigger: TGGGGCGCCATGTTGCCACCAGCTGCCACGTGGCCT...CAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GATGAGGCCACATTCCTCCAAGTCACTGCTCTGTCACCCAGACTTGGGGCGGGGTATGTATCAAAGAAGTaGTTGGTGAAGAAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: DEATFLQVTALSPRLGAGYVSKK*LVKKGS
Trigger: GCTGCCCTTCTTCACCAACCACTTCTTTGATACATA...CCCCGCCCCAAGTCTGGGTGACAGAGCAGTGACTTGGAGGAATGTGGCCTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp CTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGTCTTGGGCCAGCAACTaGGTCACAGAAGAACCCACA +
Preference number: 4 (lower is better)
Translates to: LSSSWDYRYLTPHLAISRSWASN*VTEEPT
Trigger: TGTGGGTTCTTCTGTGACCCAGTTGCTGGCCCAAGA...CCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp AGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGGTCTCTCTGTCCAGTaGCTGCCGGAGCCACACCAC +
Preference number: 4 (lower is better)
Translates to: SWDYRYLTPHLAISRTFYGLSVQ*LPEPHH
Trigger: GTGGTGTGGCTCCGGCAGCCACTGGACAGAGAGACC...ATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp AAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTGTGATCACCCCCTGGTaGTCGCTGACAGAGAACTCC +
Preference number: 4 (lower is better)
Translates to: KQLGLQVPNTTLGHLKDIVITPW*SLTENS
Trigger: GGAGTTCTCTGTCAGCGACCACCAGGGGGTGATCAC...AATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp AAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTGATGGGCGTCCCCACTaGTGTATTCTCAGGGATGCG +
Preference number: 4 (lower is better)
Translates to: KQLGLQVPNTTLGHLKDIDGRPH*CILRDA
Trigger: CGCATCCCTGAGAATACACCAGTGGGGACGCCCATC...AATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp CTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGTATTCCCTGAAACGATaGTGTAGCCAATGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: LSSSWDYRYLTPHLAISRYSLKR*CSQCPG
Trigger: CCCGGGGCATTGGCTACACCATCGTTTCAGGGAATA...CCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp TCTGCCTTTGAGCTTCTGTCTTGTTGCTGTTGCAGGAGCCATGAGCACAGAGGGTATTCCCTGAAACGATaGTGTAGCCAATGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: SAFELLSCCCCRSHEHRGYSLKR*CSQCPG
Trigger: CCCGGGGCATTGGCTACACCATCGTTTCAGGGAATA...CCCTCTGTGCTCATGGCTCCTGCAACAGCAACAAGACAGAAGCTCAAAGGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp AGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCATATTCCCTGAAACGATaGTGTAGCCAATGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: SLSSSWDYRYLTPHLAISYSLKR*CSQCPG
Trigger: CCCGGGGCATTGGCTACACCATCGTTTCAGGGAATA...TGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp CTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCATCTGGGCCGACTGTAGCGTCAGATaGGGTGCGGTCATCGTTCAG +
Preference number: 4 (lower is better)
Translates to: LLDERLLVKRCALVVIWADCSVR*GAVIVQ
Trigger: CTGAACGATGACCGCACCCCATCTGACGCTACAGTC...GGCCCAGATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp TCCAGGTGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTTGACTGTAGCGTCAGATaGGGTGCGGTCATCGTTCAG +
Preference number: 4 (lower is better)
Translates to: SRCQSPAWRSCQMAKVPFDCSVR*GAVIVQ
Trigger: CTGAACGATGACCGCACCCCATCTGACGCTACAGTC...AAAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCACCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CCGAGGACAACCGCAGCCACTGTGACTACATGGAATCTACCAAGATGTAATGGGCACCTGGATGAAGAGTaGAAGGGCAAAGCCGACCTG +
Preference number: 4 (lower is better)
Translates to: PRTTAATVTTWNLPRCNGHLDEE*KGKADL
Trigger: CAGGTCGGCTTTGCCCTTCCACTCTTCATCCAGGTG...CCCATTACATCTTGGTAGATTCCATGTAGTCACAGTGGCTGCGGTTGTCCTCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp TCCAGGTGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTTCACCTGGATGAAGAGTaGAAGGGCAAAGCCGACCTG +
Preference number: 4 (lower is better)
Translates to: SRCQSPAWRSCQMAKVPFHLDEE*KGKADL
Trigger: CAGGTCGGCTTTGCCCTTCCACTCTTCATCCAGGTG...AAAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCACCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp TGTCTTAGAATAGAAGCCCCTTCCCCATTCTCAGACGGTGTAATTCAGGCGGGGCACCTGGATGAAGAGTaGAAGGGCAAAGCCGACCTG +
Preference number: 4 (lower is better)
Translates to: CLRIEAPSPFSDGVIQAGHLDEE*KGKADL
Trigger: CAGGTCGGCTTTGCCCTTCCACTCTTCATCCAGGTG...CCCCGCCTGAATTACACCGTCTGAGAATGGGGAAGGGGCTTCTATTCTAAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS-3UTR CCA 90 bp ATGAGGATTGATTTGAAAATGCGGACAGGCCACCGCCCTCTTGTCTGCATGGCAGGGGAGATGATGAAGTaGTGGGAGTTGTTCCCCACC +
Preference number: 4 (lower is better)
Translates to: MRIDLKMRTGHRPLVCMAGEMMK*WELFPT
Trigger: GGTGGGGAACAACTCCCACCACTTCATCATCTCCCC...TGCCATGCAGACAAGAGGGCGGTGGCCTGTCCGCATTTTCAAATCAATCCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp TGTCTTAGAATAGAAGCCCCTTCCCCATTCTCAGACGGTGTAATTCAGGCGGGGGGGGAGATGATGAAGTaGTGGGAGTTGTTCCCCACC +
Preference number: 4 (lower is better)
Translates to: CLRIEAPSPFSDGVIQAGGEMMK*WELFPT
Trigger: GGTGGGGAACAACTCCCACCACTTCATCATCTCCCC...CCCCGCCTGAATTACACCGTCTGAGAATGGGGAAGGGGCTTCTATTCTAAGACA
53% GC, longest homopolymer 8 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS-3UTR CCA 90 bp AGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATATGTCCGCCTTCCCCTaGACGGAGGTCGGGGAGATG +
Preference number: 4 (lower is better)
Translates to: SWDYRYLTPHLAISRTFYMSAFP*TEVGEM
Trigger: CATCTCCCCGACCTCCGTCCAGGGGAAGGCGGACAT...ATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp CTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGATGTTGTACAGTGGCTaGCTGAAGATGGGCCGGTTG +
Preference number: 4 (lower is better)
Translates to: LSSSWDYRYLTPHLAISRMLYSG*LKMGRL
Trigger: CAACCGGCCCATCTTCAGCCAGCCACTGTACAACAT...CCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp AAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTAGCGGTCCAGGTCTGTaGCATTCAGGAACAGCACCG +
Preference number: 4 (lower is better)
Translates to: KQLGLQVPNTTLGHLKDISGPGL*HSGTAP
Trigger: CGGTGCTGTTCCTGAATGCCACAGACCTGGACCGCT...AATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp AGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAGCATTGATCCGAAACTaGGTGGAGCCTTCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: SLSSSWDYRYLTPHLAISALIRN*VEPSKE
Trigger: CTCCTTGGAAGGCTCCACCCAGTTTCGGATCAATGC...TGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp ATGAACCTTGGTAGATGCTCCCCGTCCCTGCAACCAACAGGTTCAGGAGGTCCCGGATGTATTCAGACTTaGTCTCTCGGTCAAGCAGAG +
Preference number: 4 (lower is better)
Translates to: MNLGRCSPSLQPTGSGGPGCIQT*SLGQAE
Trigger: CTCTGCTTGACCGAGAGACCAAGTCTGAATACATCC...GGGACCTCCTGAACCTGTTGGTTGCAGGGACGGGGAGCATCTACCAAGGTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp CCCAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCGGATGTATTCAGACTTaGTCTCTCGGTCAAGCAGAG +
Preference number: 4 (lower is better)
Translates to: PSLSSSWDYRYLTPHLAIGCIQT*SLGQAE
Trigger: CTCTGCTTGACCGAGAGACCAAGTCTGAATACATCC...GATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp AGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCATCCTTCCACGTGGGGTaGTTGTCATTGATGTCCAGG +
Preference number: 4 (lower is better)
Translates to: SLSSSWDYRYLTPHLAISSFHVG*LSLMSR
Trigger: CCTGGACATCAATGACAACCACCCCACGTGGAAGGA...TGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp CCGAGGACAACCGCAGCCACTGTGACTACATGGAATCTACCAAGATGTAATGGGGGTCACATCAGAGTCTaGAGGGGTCATCTCCACCAG +
Preference number: 4 (lower is better)
Translates to: PRTTAATVTTWNLPRCNGGHIRV*RGHLHQ
Trigger: CTGGTGGAGATGACCCCTCCAGACTCTGATGTGACC...CCCATTACATCTTGGTAGATTCCATGTAGTCACAGTGGCTGCGGTTGTCCTCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp AAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTATTCTCCCCCAGGTCTaGGTCAACAGCCACCACCGT +
Preference number: 4 (lower is better)
Translates to: KQLGLQVPNTTLGHLKDIILPQV*VNSHHR
Trigger: ACGGTGGTGGCTGTTGACCCAGACCTGGGGGAGAAT...AATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp AGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTATTCTCCCCCAGGTCTaGGTCAACAGCCACCACCGT +
Preference number: 4 (lower is better)
Translates to: SSWDYRYLTPHLAISRTFILPQV*VNSHHR
Trigger: ACGGTGGTGGCTGTTGACCCAGACCTGGGGGAGAAT...AAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp AGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAACTTGTTGGGTGGCTaGATGCTGTACACCAGGGTG +
Preference number: 4 (lower is better)
Translates to: SLSSSWDYRYLTPHLAISNLLGG*MLYTRV
Trigger: CACCCTGGTGTACAGCATCCAGCCACCCAACAAGTT...TGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp CAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCGTAGAACTTGTTGGGTaGCTGGATGCTGTACACCAG +
Preference number: 4 (lower is better)
Translates to: QPLKQLGLQVPNTTLGHLVELVG*LDAVHQ
Trigger: CTGGTGTACAGCATCCAGCCACCCAACAAGTTCTAC...GAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp CAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCGGCTGTAGAACTTGTTaGGTGGCTGGATGCTGTACA +
Preference number: 4 (lower is better)
Translates to: QPLKQLGLQVPNTTLGHLGCRTC*VAGCCT
Trigger: TGTACAGCATCCAGCCACCCAACAAGTTCTACAGCC...GAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp TGTCCACAAACATGCCCCCACATCCCCCTAGGTCTACCTGTAGATCCTCCTGCTGGCTGTAGAACTTGTTaGGTGGCTGGATGCTGTACA +
Preference number: 4 (lower is better)
Translates to: CPQTCPHIPLGLPVDPPAGCRTC*VAGCCT
Trigger: TGTACAGCATCCAGCCACCCAACAAGTTCTACAGCC...AGCAGGAGGATCTACAGGTAGACCTAGGGGGATGTGGGGGCATGTTTGTGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp TACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAGAGGCCACCACCCGCAGCTaGTACTCCGCGATGCGCTCG +
Preference number: 4 (lower is better)
Translates to: YRYLTPHLAISRTFYDKEATTRS*YSAMRS
Trigger: CGAGCGCATCGCGGAGTACCAGCTGCGGGTGGTGGC...CTCTTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp GGAGATCAAAACCATCTGCCTCTAAACAGGTGGGAATTCTCAACAGGTCCCCAATGGTGGAGCTCTTGGTaGGCGTGCCTGCATCACTGG +
Preference number: 4 (lower is better)
Translates to: GDQNHLPLNRWEFSTGPQWWSSW*ACLHHW
Trigger: CCAGTGATGCAGGCACGCCCACCAAGAGCTCCACCA...TTGGGGACCTGTTGAGAATTCCCACCTGTTTAGAGGCAGATGGTTTTGATCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp TGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTTAGTCAATGGTGGAGCTCTTGGTaGGCGTGCCTGCATCACTGG +
Preference number: 4 (lower is better)
Translates to: CQSPAWRSCQMAKVPFSQWWSSW*ACLHHW
Trigger: CCAGTGATGCAGGCACGCCCACCAAGAGCTCCACCA...TTGACTAAAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp GAATGCTTGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCATGCTGGTGGAGCTCTTaGTGGGCGTGCCTGCATCAC +
Preference number: 4 (lower is better)
Translates to: ECLFIDIDFLVHVGMPPPCWWSS*WACLHH
Trigger: GTGATGCAGGCACGCCCACCAAGAGCTCCACCAGCA...TGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACAAGCATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp CCCAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTGCTCTGCAGAAAGATaGGCCGGTTGTCATTCACAT +
Preference number: 4 (lower is better)
Translates to: PSLSSSWDYRYLTPHLAICSAER*AGCHSH
Trigger: ATGTGAATGACAACCGGCCCATCTTTCTGCAGAGCA...GATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp CTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGTCTCGGTCTGTGGCTTaGACCACGATGACTGACGTT +
Preference number: 4 (lower is better)
Translates to: LSSSWDYRYLTPHLAISRSRSVA*TTMTDV
Trigger: AACGTCAGTCATCGTGGTCCAAGCCACAGACCGAGA...CCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp CCCAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCAAGCGGTACGTGATTTaGTTGAGGTTGTCGATGGAG +
Preference number: 4 (lower is better)
Translates to: PSLSSSWDYRYLTPHLAIKRYVI*LRLSME
Trigger: CTCCATCGACAACCTCAACCAAATCACGTACCGCTT...GATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp AGATCTTATGAAGGTAGAGGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGATCACGTACACGTGCGTaGTGGCCGACAGGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: RSYEGRGQMLNERLAKVGSRTRA*WPTGLG
Trigger: CCCCAACCCTGTCGGCCACCACGCACGTGTACGTGA...TCCCACTTTTGCCAGACGCTCATTCAGCATCTGACCTCTACCTTCATAAGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGATCTGAGCAGCTGATGCGGCCAAAGGGCTTGAACTaGGGCGTATTGTCATTGACG +
Preference number: 4 (lower is better)
Translates to: GQMLNERLAKVGSEQLMRPKGLN*GVLSLT
Trigger: CGTCAATGACAATACGCCCCAGTTCAAGCCCTTTGG...CCGCATCAGCTGCTCAGATCCCACTTTTGCCAGACGCTCATTCAGCATCTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GAGAGTGACCTCATAGGTGGCAACCAGCTCCCGATTCATGGGGGACTTCACCATCCAAAGGGCTTGAACTaGGGCGTATTGTCATTGACG +
Preference number: 4 (lower is better)
Translates to: ESDLIGGNQLPIHGGLHHPKGLN*GVLSLT
Trigger: CGTCAATGACAATACGCCCCAGTTCAAGCCCTTTGG...ATGGTGAAGTCCCCCATGAATCGGGAGCTGGTTGCCACCTATGAGGTCACTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp AGATCTTATGAAGGTAGAGGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGACAGCTGGACATACCCTaGGGGCACCAGGTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: RSYEGRGQMLNERLAKVGQLDIP*GHQVQQ
Trigger: CTGCTGGACCTGGTGCCCCCAGGGTATGTCCAGCTG...TCCCACTTTTGCCAGACGCTCATTCAGCATCTGACCTCTACCTTCATAAGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCACCTGGACTTTCGCGACGGTTGCTaGCTACATCCCCAGGGTTGT +
Preference number: 4 (lower is better)
Translates to: CSLTLTFLSTWGCHLHLDFRDGC*LHPQGC
Trigger: ACAACCCTGGGGATGTAGCCAGCAACCGTCGCGAAA...GTCCAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp TGGATAAGCAGTTCTGTCTGCGCAAAGTTCACCCGGCCCTTCTTGTCCACATGGTTGGGACCTTCATCCTaGTCAGTGGCCATCATGGTG +
Preference number: 4 (lower is better)
Translates to: WISSSVCAKFTRPFLSTWLGPSS*SVAIMV
Trigger: CACCATGATGGCCACTGACCAGGATGAAGGTCCCAA...CCATGTGGACAAGAAGGGCCGGGTGAACTTTGCGCAGACAGAACTGCTTATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp AAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAGCAGTGGCCGCTGTGTaGTCACCAAGCCCGAGTCCA +
Preference number: 4 (lower is better)
Translates to: KPEGTSVTSVYKLGTHLGAVAAV*SPSPSP
Trigger: TGGACTCGGGCTTGGTGACCACACAGCGGCCACTGC...TCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp TGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCACCTGGACCTTGGTGAAGCGTGGTaGCTGGTCGTTGATGTCCTC +
Preference number: 4 (lower is better)
Translates to: CSLTLTFLSTWGCHLHLDLGEAW*LVVDVL
Trigger: GAGGACATCAACGACCAGCCACCACGCTTCACCAAG...GTCCAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp TGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCACCTGGACAGCCTTGGTGAAGCGTaGTGGCTGGTCGTTGATGTC +
Preference number: 4 (lower is better)
Translates to: CSLTLTFLSTWGCHLHLDSLGEA*WLVVDV
Trigger: GACATCAACGACCAGCCACCACGCTTCACCAAGGCT...GTCCAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp AAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGACCACCTTGGCGTCGGTaGCCACCCCTGCAGTGTACT +
Preference number: 4 (lower is better)
Translates to: KPEGTSVTSVYKLGTHLGPPWRR*PPLQCT
Trigger: AGTACACTGCAGGGGTGGCCACCGACGCCAAGGTGG...TCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp GGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGATCTGAGCAGCTGATGCGGCCCGGAAGTAGTGGATaGCCAGAATGCTGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: GQMLNERLAKVGSEQLMRPGSSG*PECCRR
Trigger: TCTTCTACAGCATTCTGGCCATCCACTACTTCCGGG...CCGCATCAGCTGCTCAGATCCCACTTTTGCCAGACGCTCATTCAGCATCTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CCGGTCCAGAGAAGACAGCACATAGATGTCACCCGTGGTGGGGTTGATGGCAAAATGTTGGAGAGCAGGTaGATGAACTCCTCCTCGAAG +
Preference number: 4 (lower is better)
Translates to: PVQRRQHIDVTRGGVDGKMLESR*MNSSSK
Trigger: CTTCGAGGAGGAGTTCATCCACCTGCTCTCCAACAT...TTTGCCATCAACCCCACCACGGGTGACATCTATGTGCTGTCTTCTCTGGACCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CGACAGAAGGGATCCAGCCACACAGGGTTGGCTCCATCAAAGGAGTACTTGTTGTTCTCATCGATCATCTaGATCACCCGGTCCACGTCC +
Preference number: 4 (lower is better)
Translates to: RQKGSSHTGLAPSKEYLLFSSII*ITRSTS
Trigger: GGACGTGGACCGGGTGATCCAGATGATCGATGAGAA...CAACAAGTACTCCTTTGATGGAGCCAACCCTGTGTGGCTGGATCCCTTCTGTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp AAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAGCAGCCGGACAGAGATaGCAGGCTGCACGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: KPEGTSVTSVYKLGTHLGAAGQR*QAARPG
Trigger: TCCTGGACGTGCAGCCTGCCATCTCTGTCCGGCTGC...TCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp AAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGATTCCATGGGTGCGCGTaGGGCTGTTCCACAGGTCGG +
Preference number: 4 (lower is better)
Translates to: KPEGTSVTSVYKLGTHLGFHGCA*GCSTGR
Trigger: CCGACCTGTGGAACAGCCCCACGCGCACCCATGGAA...TCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp TGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCACCTGGACTGTCATACTCCTGGATaGCAGCCCGCAGGTATCGGT +
Preference number: 4 (lower is better)
Translates to: CSLTLTFLSTWGCHLHLDCHTPG*QPAGIG
Trigger: ACCGATACCTGCGGGCTGCCATCCAGGAGTATGACA...GTCCAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp AACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAACCCCTTGAGCTCCACTaGTGGCTTGTGGCGGAAGCG +
Preference number: 4 (lower is better)
Translates to: NRREHQSLLFISWAHIWEPLELH*WLVAEA
Trigger: CGCTTCCGCCACAAGCCACCAGTGGAGCTCAAGGGG...TTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp AGATCTTATGAAGGTAGAGGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGACAGCCTGAGCCAAGCTaGTCCCCAGACTCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: RSYEGRGQMLNERLAKVGQPEPS*SPDSWA
Trigger: GGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTG...TCCCACTTTTGCCAGACGCTCATTCAGCATCTGACCTCTACCTTCATAAGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp AGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGCCAGTTCAGTCTGCAAAGGCTaGGCCACGGCCTTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: REHQSLLFISWAHIWEASSVCKG*ATALAQ
Trigger: CTGGGCCAAGGCCGTGGCCCAGCCTTTGCAGACTGA...ACTGGCTTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp CTTAGACTTGTGATGTCTCTGGACCTTGCTGTCTTAACCTGTGATGTGGCCATGAAAGCAGCTCTGTTCTaGGCCTTGCTGGGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: LRLVMSLDLAVLTCDVAMKAALF*ALLGPG
Trigger: GCCAGGGCCCAGCAAGGCCCAGAACAGAGCTGCTTT...CATGGCCACATCACAGGTTAAGACAGCAAGGTCCAGAGACATCACAAGTCTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp AAAAACATGGCAAGGACCCAACTAAACACACCCGTGGGCCCCCAGTTTGCAGCTAGTCCCACCCCAGGATaGGCTTCTCAGAATCCCAAA +
Preference number: 4 (lower is better)
Translates to: KNMARTQLNTPVGPQFAASPTPG*ASQNPK
Trigger: TTTGGGATTCTGAGAAGCCCATCCTGGGGTGGGACT...AGCTGCAAACTGGGGGCCCACGGGTGTGTTTAGTTGGGTCCTTGCCATGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp CGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCATCTAGGGCTCTCCAAGCATaGTCTTGGCAGCCGTCTTGG +
Preference number: 4 (lower is better)
Translates to: RCCLMKDFWSRDVHSWSSRALQA*SWQPSW
Trigger: CCAAGACGGCTGCCAAGACCATGCTTGGAGAGCCCT...AGATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp GTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAAGACAGTGGCCTTGATGAAAGACTTCTaGTCAAGAGATGTGCACTCG +
Preference number: 4 (lower is better)
Translates to: VDPPASETGAAGCRKTVALMKDF*SRDVHS
Trigger: CGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAA...GGCCACTGTCTTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp TGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTTAGTCAACCATGCTCATCGCCCTaGCCTGCATCTTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: CQSPAWRSCQMAKVPFSQPCSSP*PASSSC
Trigger: GCAGGAGGAAGATGCAGGCCAGGGCGATGAGCATGG...TTGACTAAAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCATCTGGGCCTGTCTGCATGGCAGATaGGCACAGGGTGGAACAGGA +
Preference number: 4 (lower is better)
Translates to: LLDERLLVKRCALVVIWACLHGR*AQGGTG
Trigger: TCCTGTTCCACCCTGTGCCCATCTGCCATGCAGACA...GGCCCAGATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp TCCAGGTGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTTCTCACAATGTGGCCTTaGCCTTCCCACCACCAAGCT +
Preference number: 4 (lower is better)
Translates to: SRCQSPAWRSCQMAKVPFLTMWP*PSHHQA
Trigger: AGCTTGGTGGTGGGAAGGCCAAGGCCACATTGTGAG...AAAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCACCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CAA 72 bp ACACTAGGGATGCTATCTGTGGTTTTGGTGAGTGCTTaGCTGATGACCCGTCAAAGCAGTCCCACCCCAGGA +
Preference number: 4 (lower is better)
Translates to: TLGMLSVVLVSA*LMTRQSSPTPG
Trigger: TCCTGGGGTGGGACTGCTTTGACGGGTCATCAGCAAAGCACTCACCAAAACCACAGATAGCATCCCTAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CAA 72 bp TGCACATTGTCAGTATTGACAATGGCCCCAGTGATGTaGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCG +
Preference number: 4 (lower is better)
Translates to: CTLSVLTMAPVM*ESRWMNSSSKP
Trigger: CGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAACATCACTGGGGCCATTGTCAATACTGACAATGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CTAAACAGGTGGGAATTCTCAACAGGTCCCCAAGGAAGGATGAGGCCACATTCCCAGAGAACTCCACGGTaGACTCTGACTTGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: LNRWEFSTGPQGRMRPHSQRTPR*TLTWSL
Trigger: GAGAGACCAAGTCAGAGTTCACCGTGGAGTTCTCTG...GGAATGTGGCCTCATCCTTCCTTGGGGACCTGTTGAGAATTCCCACCTGTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR TCA 90 bp CAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTACTGTGGCATTCACGATaGAGATGGGCGTCCCCACTG +
Preference number: 4 (lower is better)
Translates to: QLGLQVPNTTLGHLKDILLWHSR*RWASPL
Trigger: CAGTGGGGACGCCCATCTTCATCGTGAATGCCACAG...TAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp TGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTTAGTCAACTGTGGCATTCACGATaGAGATGGGCGTCCCCACTG +
Preference number: 4 (lower is better)
Translates to: CQSPAWRSCQMAKVPFSQLWHSR*RWASPL
Trigger: CAGTGGGGACGCCCATCTTCATCGTGAATGCCACAG...TTGACTAAAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR TCA 90 bp GTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTAGAAGCTCCCGGATCACTGTaGCGATACCGCGGGCGCTGT +
Preference number: 4 (lower is better)
Translates to: VAHIYHLDLLSIQSLVLEAPGSL*RYRGRC
Trigger: ACAGCGCCCGCGGTATCGTCACAGTGATCCGGGAGC...TTCTAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646131.1
CDS-3UTR TCA 90 bp AGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTAGGTCAGCACTCCGCTaGTGTAGTCCAGGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: SSWDYRYLTPHLAISRTFRSALR*CSPGQR
Trigger: TCTTTGCCCTGGACTACATCAGCGGAGTGCTGACCT...AAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp TTACCTCCCTCTAGAATGAACCTTGGTAGATGCTCCCCGTCCCTGCAACCAACATGTACTCGGAGCTGTTaGACTCCGGGGCATTGTCAT +
Preference number: 4 (lower is better)
Translates to: LPPSRMNLGRCSPSLQPTCTRSC*TPGHCH
Trigger: ATGACAATGCCCCGGAGTTCAACAGCTCCGAGTACA...TGTTGGTTGCAGGGACGGGGAGCATCTACCAAGGTTCATTCTAGAGGGAGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR TCA 90 bp AGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTGTCCACCACCTGGATaGAGAGTGGAAGGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: SSWDYRYLTPHLAISRTFCPPPG*RVEGQS
Trigger: GCTTTGCCCTTCCACTCTTCATCCAGGTGGTGGACA...AAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp AGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTGTACAGTGGCTGGCTaGAGATGGGCCGGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: SSWDYRYLTPHLAISRTFCTVAG*RWAGCH
Trigger: ATGACAACCGGCCCATCTTCAGCCAGCCACTGTACA...AAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp CGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCATCTCGTTCTCGTACAGGCTaGTGTTGTACAGTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: RCCLMKDFWSRDVHSWSSRSRTG*CCTVAG
Trigger: GCCAGCCACTGTACAACATCAGCCTGTACGAGAACG...AGATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp AGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATCCGTGGCTCCTGCCATaGTGTTCTCCACCACGGAGA +
Preference number: 4 (lower is better)
Translates to: SWDYRYLTPHLAISRTFYPWLLP*CSPPRR
Trigger: TCTCCGTGGTGGAGAACATCATGGCAGGAGCCACGG...ATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp CTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCATCTGGGCCCTTCCAAGGAGTAGATaGTGGACTCCTGGCCGTACT +
Preference number: 4 (lower is better)
Translates to: LLDERLLVKRCALVVIWALPRSR*WTPGRT
Trigger: AGTACGGCCAGGAGTCCATCATCTACTCCTTGGAAG...GGCCCAGATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp CTAAACAGGTGGGAATTCTCAACAGGTCCCCAAGGAAGGATGAGGCCACATTCCTCATCTCCACCAGGTTaGTGTAGTAGGGTGCGTCCT +
Preference number: 4 (lower is better)
Translates to: LNRWEFSTGPQGRMRPHSSSPPG*CSRVRP
Trigger: AGGACGCACCCTACTACATCAACCTGGTGGAGATGA...GGAATGTGGCCTCATCCTTCCTTGGGGACCTGTTGAGAATTCCCACCTGTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR TCA 90 bp GGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGATCTGAGCAGCTGATGCGGACAAAAGGCAGGTTCTaGAAGGTGGGGTCATTGTCA +
Preference number: 4 (lower is better)
Translates to: GQMLNERLAKVGSEQLMRTKGRF*KVGSLS
Trigger: TGACAATGACCCCACCTTTCAGAACCTGCCTTTTGT...CCGCATCAGCTGCTCAGATCCCACTTTTGCCAGACGCTCATTCAGCATCTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp TCCACAAACATGCCCCCACATCCCCCTAGGTCTACCTGTAGATCCTCCTGCTTCACAAAAGGCAGGTTCTaGAAGGTGGGGTCATTGTCA +
Preference number: 4 (lower is better)
Translates to: STNMPPHPPRSTCRSSCFTKGRF*KVGSLS
Trigger: TGACAATGACCCCACCTTTCAGAACCTGCCTTTTGT...GAAGCAGGAGGATCTACAGGTAGACCTAGGGGGATGTGGGGGCATGTTTGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp AGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATCGCGGTAACCCACGCTaGACTTCCCATCCACGTTGC +
Preference number: 4 (lower is better)
Translates to: SWDYRYLTPHLAISRTFYRGNPR*TSHPRC
Trigger: GCAACGTGGATGGGAAGTTCAGCGTGGGTTACCGCG...ATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp AGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGCCAGTTATCAGCACGTGGGATaGGTTCCGCTCCCGGTCCAG +
Preference number: 4 (lower is better)
Translates to: REHQSLLFISWAHIWEASYQHVG*VPLPVQ
Trigger: CTGGACCGGGAGCGGAACTCATCCCACGTGCTGATA...ACTGGCTTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp CAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTACGGGGGCCTCATCGTTaGTGTCCTCCACGTACACAA +
Preference number: 4 (lower is better)
Translates to: QLGLQVPNTTLGHLKDILRGPHR*CPPRTQ
Trigger: TTGTGTACGTGGAGGACATCAACGATGAGGCCCCCG...TAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp AAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTGGCTTGGACCACGATaGCTGACGTTCCAATGCCTG +
Preference number: 4 (lower is better)
Translates to: KQLGLQVPNTTLGHLKDIWLGPR*LTFQCL
Trigger: CAGGCATTGGAACGTCAGTCATCGTGGTCCAAGCCA...AATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp TACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAGAGTGCAGAAGCCCTGGTTaGAGGGCGGGGCCTGGTCAG +
Preference number: 4 (lower is better)
Translates to: YRYLTPHLAISRTFYDKECRSPG*RAGPGQ
Trigger: CTGACCAGGCCCCGCCCTTCAACCAGGGCTTCTGCA...CTCTTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp AAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTGATGGCAGCCTCGTATaGGGCATTGGAGAACTGCAC +
Preference number: 4 (lower is better)
Translates to: KQLGLQVPNTTLGHLKDIDGSLV*GIGELH
Trigger: GTGCAGTTCTCCAATGCCTCATACGAGGCTGCCATC...AATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp TGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCACCTGGACCCTTGTTGCCCTCGGTaGTGTAGTAGGACAGAACAC +
Preference number: 4 (lower is better)
Translates to: CSLTLTFLSTWGCHLHLDPCCPR*CSRTEH
Trigger: GTGTTCTGTCCTACTACATCACCGAGGGCAACAAGG...GTCCAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp AGATCTTATGAAGGTAGAGGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGACGACGATGGCATAGGTaGCTGTGCCGTTGGGACCCT +
Preference number: 4 (lower is better)
Translates to: RSYEGRGQMLNERLAKVGRRWHR*LCRWDP
Trigger: AGGGTCCCAACGGCACAGTCACCTATGCCATCGTCG...TCCCACTTTTGCCAGACGCTCATTCAGCATCTGACCTCTACCTTCATAAGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp AAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGACGGGGACCCGTTGTCTaGGGCCCTCACGGTAAAGTT +
Preference number: 4 (lower is better)
Translates to: KPEGTSVTSVYKLGTHLGRGPVV*GPHGKV
Trigger: AACTTTACCGTGAGGGCCTCAGACAACGGGTCCCCG...TCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp GGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGATCTGAGCAGCTGATGCGGCAAGGCTGTACTCAATaGGTGCAAAGTTGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: GQMLNERLAKVGSEQLMRQGCTQ*VQSCLS
Trigger: ACTCAGGCAACTTTGCACTCATTGAGTACAGCCTTG...CCGCATCAGCTGCTCAGATCCCACTTTTGCCAGACGCTCATTCAGCATCTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp AAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAGCGGGATCTCCTCTCTaGTGTGGAGGATGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: KPEGTSVTSVYKLGTHLGAGSPL*CGGWCR
Trigger: ACGGCACCATCCTCCACATCAGAGAGGAGATCCCGC...TCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp AGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGCCAGTGCACCTCCTGCAGTGTaGGGTCAGCAACCAGGTCGA +
Preference number: 4 (lower is better)
Translates to: REHQSLLFISWAHIWEASAPPAV*GQQPGR
Trigger: TCGACCTGGTTGCTGACCTCACACTGCAGGAGGTGC...ACTGGCTTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp AGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGCCAGTTGGAGAGCAGGTGGATaGACTCCTCCTCGAAGCCGC +
Preference number: 4 (lower is better)
Translates to: REHQSLLFISWAHIWEASWRAGG*TPPRSR
Trigger: GCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCA...ACTGGCTTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp AAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAGCCACGATTCCCAGCTaGGCCAGCCACAATGGCCTT +
Preference number: 4 (lower is better)
Translates to: KPEGTSVTSVYKLGTHLGATIPS*ASHNGL
Trigger: AAGGCCATTGTGGCTGGCTCAGCTGGGAATCGTGGC...TCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp TGGATAAGCAGTTCTGTCTGCGCAAAGTTCACCCGGCCCTTCTTGTCCACATGGGTAGAGGTCAGATGCTaGATGAGCGTCTGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: WISSSVCAKFTRPFLSTWVEVRC*MSVWQK
Trigger: CTTTTGCCAGACGCTCATTCAGCATCTGACCTCTAC...CCATGTGGACAAGAAGGGCCGGGTGAACTTTGCGCAGACAGAACTGCTTATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp GTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAAGACAGTGGCCATGATTCATGAGGATTaGTTTGAAAATGCGGACAGG +
Preference number: 4 (lower is better)
Translates to: VDPPASETGAAGCRKTVAMIHED*FENADR
Trigger: CCTGTCCGCATTTTCAAATCAATCCTCATGAATCAT...GGCCACTGTCTTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp CTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCATCTGGGCCCAACCCCAGACATATTaGGCCAAAAGCTCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: LLDERLLVKRCALVVIWAQPQTY*AKSSAW
Trigger: CCAGGCTGAGCTTTTGGCTCAATATGTCTGGGGTTG...GGCCCAGATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR TCA 90 bp TGTCTTAGAATAGAAGCCCCTTCCCCATTCTCAGACGGTGTAATTCAGGCGGGGCAATTGGTTCCAGGATaGCACAACCAACTGGGCCGA +
Preference number: 4 (lower is better)
Translates to: CLRIEAPSPFSDGVIQAGQLVPG*HNQLGR
Trigger: TCGGCCCAGTTGGTTGTGTCATCCTGGAACCAATTG...CCCCGCCTGAATTACACCGTCTGAGAATGGGGAAGGGGCTTCTATTCTAAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS-3UTR TCA 90 bp TGTCTTAGAATAGAAGCCCCTTCCCCATTCTCAGACGGTGTAATTCAGGCGGGGGACTGGGCAAGACTCTaGGCTTGTGTAGCACACATC +
Preference number: 4 (lower is better)
Translates to: CLRIEAPSPFSDGVIQAGDWARL*ACVAHI
Trigger: GATGTGTGCTACACAAGCTCAGAGTCTTGCCCAGTC...CCCCGCCTGAATTACACCGTCTGAGAATGGGGAAGGGGCTTCTATTCTAAGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS-3UTR GCA 90 bp CATAACTCGTTCCTGGCCACAGAGCAAGTTATTGACAGAGTTGGTCTTAAGTTTAGGAGTAGAGGACGCTaGCCCCTGCCCCCAAGTCGG +
Preference number: 4 (lower is better)
Translates to: HNSFLATEQVIDRVGLKFRSRGR*PLPPSR
Trigger: CCGACTTGGGGGCAGGGGGCAGCGTCCTCTACTCCT...AAACTTAAGACCAACTCTGTCAATAACTTGCTCTGTGGCCAGGAACGAGTTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp AGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGGCAAAGCCGACCTGTaGCAGCTCAGTGATGGCCAC +
Preference number: 4 (lower is better)
Translates to: SWDYRYLTPHLAISRTFYGKADL*QLSDGH
Trigger: GTGGCCATCACTGAGCTGGCACAGGTCGGCTTTGCC...ATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp CTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGTTCCCCAAAGGTGCCTaGATCATTGTCAGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: LSSSWDYRYLTPHLAISRFPKGA*IIVSCQ
Trigger: CTGGCAACTGACAATGATGCAGGCACCTTTGGGGAA...CCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp AGGTGGGAATTCTCAACAGGTCCCCAAGGAAGGATGAGGCCACATTCCTCCAAGTGTTTACGGTGGCGATaGCAGTTTTCTGGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: RWEFSTGPQGRMRPHSSKCLRWR*QFSGCG
Trigger: GCCACAACCAGAAAACTGGCATCGCCACCGTAAACA...CTTGGAGGAATGTGGCCTCATCCTTCCTTGGGGACCTGTTGAGAATTCCCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR GCA 90 bp AGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCATGTTTACGGTGGCGATaGCAGTTTTCTGGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: SLSSSWDYRYLTPHLAISCLRWR*QFSGCG
Trigger: GCCACAACCAGAAAACTGGCATCGCCACCGTAAACA...TGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp GACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAGCATGGCGTGGGTGGTaGGGATCTTGCCCGTGGTGC +
Preference number: 4 (lower is better)
Translates to: DYRYLTPHLAISRTFYDKAWRGW*GSCPWC
Trigger: GCACCACGGGCAAGATCCGCACCACCCACGCCATGC...TTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp TACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAGAGGCATGGCGTGGGTGGTaGGGATCTTGCCCGTGGTGC +
Preference number: 4 (lower is better)
Translates to: YRYLTPHLAISRTFYDKEAWRGW*GSCPWC
Trigger: GCACCACGGGCAAGATCCGCACCACCCACGCCATGC...CTCTTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp TACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAGAGGCATGCCCACCGGCATaGGGTAGGACACCAGGCCGT +
Preference number: 4 (lower is better)
Translates to: YRYLTPHLAISRTFYDKEACPPA*GRTPGR
Trigger: ACGGCCTGGTGTCCTACCGCATGCCGGTGGGCATGC...CTCTTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp AAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGCTCTTGGTGGGCGTaGCTGCATCACTGGCCACCA +
Preference number: 4 (lower is better)
Translates to: KPEGTSVTSVYKLGTHLGSSWWA*LHHWPP
Trigger: TGGTGGCCAGTGATGCAGGCACGCCCACCAAGAGCT...TCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp AGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATCCACGTCGTTGTCCGTaGAGTTCAGCCAGACCACCC +
Preference number: 4 (lower is better)
Translates to: SWDYRYLTPHLAISRTFYPRRCP*SSARPP
Trigger: GGGTGGTCTGGCTGAACTGCACGGACAACGACGTGG...ATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp TTACCTCCCTCTAGAATGAACCTTGGTAGATGCTCCCCGTCCCTGCAACCAACAGAAGTAGCTGAGCTCTaGATTGAGGCCCACGTCGTT +
Preference number: 4 (lower is better)
Translates to: LPPSRMNLGRCSPSLQPTEVAEL*IEAHVV
Trigger: AACGACGTGGGCCTCAATGCAGAGCTCAGCTACTTC...TGTTGGTTGCAGGGACGGGGAGCATCTACCAAGGTTCATTCTAGAGGGAGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR GCA 90 bp AGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATCGAACACGGTGGCTGTaGCCGTGTGTCGCTTCCCTA +
Preference number: 4 (lower is better)
Translates to: SWDYRYLTPHLAISRTFYRTRWL*PCVASL
Trigger: TAGGGAAGCGACACACGGGCACAGCCACCGTGTTCG...ATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp CTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGCTTTCAGCTGCAAGATaGTGTGGCCTTCAGGGATGT +
Preference number: 4 (lower is better)
Translates to: LSSSWDYRYLTPHLAISRLSAAR*CGLQGC
Trigger: ACATCCCTGAAGGCCACAGCATCTTGCAGCTGAAAG...CCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616684.4
CDS-3UTR GCA 90 bp AGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAGGATCCGGAAGTTGTTaGCATGGTTACCATGGAGGA +
Preference number: 4 (lower is better)
Translates to: SLSSSWDYRYLTPHLAISGSGSC*HGYHGG
Trigger: TCCTCCATGGTAACCATGGCAACAACTTCCGGATCC...TGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp AAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAGGCAATGACCTTCCCTaGCGAGGAGTCCTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: KPEGTSVTSVYKLGTHLGGNDLP*RGVLQL
Trigger: CAGCTGGAGGACTCCTCGGCAGGGAAGGTCATTGCC...TCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp TGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCACCTGGACAATTTTCGCGACGGTTaGTGGCTACATCCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: CSLTLTFLSTWGCHLHLDNFRDG*WLHPQG
Trigger: ACCCTGGGGATGTAGCCAGCAACCGTCGCGAAAATT...GTCCAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp AGATCTTATGAAGGTAGAGGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGAACTCCCAGTCCCGGTTaGCCGCAGTCTTCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: RSYEGRGQMLNERLAKVGTPSPG*PQSSGS
Trigger: GCTTCCTGAAGACTGCGGGCAACCGGGACTGGGAGT...TCCCACTTTTGCCAGACGCTCATTCAGCATCTGACCTCTACCTTCATAAGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp AGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGCCAGTCGTGTCGTTGTGGCCTaGCAGGTCTCGGGCCACAAT +
Preference number: 4 (lower is better)
Translates to: REHQSLLFISWAHIWEASRVVVA*QVSGHN
Trigger: ATTGTGGCCCGAGACCTGGCAGGCCACAACGACACG...ACTGGCTTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp AAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGATTGTCCACGTGGGGATaGCACCTCCACCTGGACGTC +
Preference number: 4 (lower is better)
Translates to: KPEGTSVTSVYKLGTHLGLSTWG*HLHLDV
Trigger: GACGTCCAGGTGGAGGTGGCATCCCCACGTGGACAA...TCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp AGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTGGCTGCCTGCAAGATaGTGTGGCCTTCAGGGATGT +
Preference number: 4 (lower is better)
Translates to: SSWDYRYLTPHLAISRTFWLPAR*CGLQGC
Trigger: ACATCCCTGAAGGCCACAGCATCTTGCAGGCAGCCA...AAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398809.9
CDS-3UTR GCA 90 bp AGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAAGAGGAGAGTGCTGTaGACACAGAAGGAGCTCAAC +
Preference number: 4 (lower is better)
Translates to: SLSSSWDYRYLTPHLAISKRRVL*TQKELN
Trigger: GTTGAGCTCCTTCTGTGTGCACAGCACTCTCCTCTT...TGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp CTGCGGCCTCTTACCATCCATAACTCGTTCCTGGCCACAGAGCAAGTTATTGACACCAGCTTGGGAGCTTaGAGAGAGCCAGACATTGTC +
Preference number: 4 (lower is better)
Translates to: LRPLTIHNSFLATEQVIDTSLGA*REPDIV
Trigger: GACAATGTCTGGCTCTCTGCAAGCTCCCAAGCTGGT...GTCAATAACTTGCTCTGTGGCCAGGAACGAGTTATGGATGGTAAGAGGCCGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp CATAACTCGTTCCTGGCCACAGAGCAAGTTATTGACAGAGTTGGTCTTAAGTTTCCAGCATCTGCCTGGTaGCCTGTGGGAGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: HNSFLATEQVIDRVGLKFPASAW*PVGAAA
Trigger: GGCAGCTGCTCCCACAGGGCACCAGGCAGATGCTGG...AAACTTAAGACCAACTCTGTCAATAACTTGCTCTGTGGCCAGGAACGAGTTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp CTCCAGGTGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTCCAGCATGGAGAAGTTaGCAAATGGCAAAGGTTCCC +
Preference number: 4 (lower is better)
Translates to: LQVPKPSMEKLPNGKGSLPAWRS*QMAKVP
Trigger: GGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGG...AAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCACCTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp TCTGCCTTTGAGCTTCTGTCTTGTTGCTGTTGCAGGAGCCATGAGCACAGAGGGCTGTCTTGTTGCTGTTaGAGGAGCCATGAGCACAGA +
Preference number: 4 (lower is better)
Translates to: SAFELLSCCCCRSHEHRGLSCCC*RSHEHR
Trigger: TCTGTGCTCATGGCTCCTGCAACAGCAACAAGACAG...CCCTCTGTGCTCATGGCTCCTGCAACAGCAACAAGACAGAAGCTCAAAGGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp CTGCCTTTGAGCTTCTGTCTTGTTGCTGTTGCAGGAGCCATGAGCACAGAGGGCCAGTGGGAAAGGAAATaGCCTGTCAGGTGTATGATG +
Preference number: 4 (lower is better)
Translates to: LPLSFCLVAVAGAMSTEGQWERK*PVRCMM
Trigger: CATCATACACCTGACAGGGCATTTCCTTTCCCACTG...GCCCTCTGTGCTCATGGCTCCTGCAACAGCAACAAGACAGAAGCTCAAAGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp CTCCATCACTGCTCAGCTGTGTGTACACTTAGACTTGTGATGTCTCTGGACCTTCCCAAATTCTGCACGTaGAGACCTTCCCCCACTCCC +
Preference number: 4 (lower is better)
Translates to: LHHCSAVCTLRLVMSLDLPKFCT*RPSPTP
Trigger: GGGAGTGGGGGAAGGTCTGCACGTGCAGAATTTGGG...AAGGTCCAGAGACATCACAAGTCTAAGTGTACACACAGCTGAGCAGTGATGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466757.8
CDS-3UTR CCA 90 bp CAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTAAAAAGCCAGGCCACGTaGCAGCTGGTGGCAACATGG +
Preference number: 4 (lower is better)
Translates to: QLGLQVPNTTLGHLKDILKSQAT*QLVATW
Trigger: CCATGTTGCCACCAGCTGCCACGTGGCCTGGCTTTT...TAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp TGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCACCTGGACTCTTGGGCCAGCAACTaGGTCACAGAAGAACCCACA +
Preference number: 4 (lower is better)
Translates to: CSLTLTFLSTWGCHLHLDSWASN*VTEEPT
Trigger: TGTGGGTTCTTCTGTGACCCAGTTGCTGGCCCAAGA...GTCCAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GAATGCTTGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCAGTGATCACCCCCTGGTaGTCGCTGACAGAGAACTCC +
Preference number: 4 (lower is better)
Translates to: ECLFIDIDFLVHVGMPPPVITPW*SLTENS
Trigger: GGAGTTCTCTGTCAGCGACCACCAGGGGGTGATCAC...TGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACAAGCATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp CAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTACGTGTGATCACCCCCTaGTGGTCGCTGACAGAGAAC +
Preference number: 4 (lower is better)
Translates to: QLGLQVPNTTLGHLKDILRVITP*WSLTEN
Trigger: GTTCTCTGTCAGCGACCACCAGGGGGTGATCACACG...TAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp TGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTTAGTCAACGTGTGATCACCCCCTaGTGGTCGCTGACAGAGAAC +
Preference number: 4 (lower is better)
Translates to: CQSPAWRSCQMAKVPFSQRVITP*WSLTEN
Trigger: GTTCTCTGTCAGCGACCACCAGGGGGTGATCACACG...TTGACTAAAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp AGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTGGGTGGACAGAGGCCTaGTCTTGTCTTGATCTGTGG +
Preference number: 4 (lower is better)
Translates to: SSWDYRYLTPHLAISRTFGWTEA*SCLDLW
Trigger: CCACAGATCAAGACAAGACCAGGCCTCTGTCCACCC...AAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp CAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTACCAAGTTGGCCAGGGTaGACAGAGGCCTGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: QLGLQVPNTTLGHLKDILPSWPG*TEAWSC
Trigger: ACAAGACCAGGCCTCTGTCCACCCTGGCCAACTTGG...TAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp TGTCTTAGAATAGAAGCCCCTTCCCCATTCTCAGACGGTGTAATTCAGGCGGGGTATTCCCTGAAACGATaGTGTAGCCAATGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: CLRIEAPSPFSDGVIQAGYSLKR*CSQCPG
Trigger: CCCGGGGCATTGGCTACACCATCGTTTCAGGGAATA...CCCCGCCTGAATTACACCGTCTGAGAATGGGGAAGGGGCTTCTATTCTAAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000646131.1
CDS-3UTR CCA 90 bp AAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTGTCAGGATGAAGCCATaGCTGTACAGGGGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: KQLGLQVPNTTLGHLKDIVRMKP*LYRGFS
Trigger: GGAGAACCCCCTGTACAGCCATGGCTTCATCCTGAC...AATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp AAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTGACTGTAGCGTCAGATaGGGTGCGGTCATCGTTCAG +
Preference number: 4 (lower is better)
Translates to: KQLGLQVPNTTLGHLKDIDCSVR*GAVIVQ
Trigger: CTGAACGATGACCGCACCCCATCTGACGCTACAGTC...AATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp AGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTGACTGTAGCGTCAGATaGGGTGCGGTCATCGTTCAG +
Preference number: 4 (lower is better)
Translates to: SSWDYRYLTPHLAISRTFDCSVR*GAVIVQ
Trigger: CTGAACGATGACCGCACCCCATCTGACGCTACAGTC...AAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp AAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTCACCTGGATGAAGAGTaGAAGGGCAAAGCCGACCTG +
Preference number: 4 (lower is better)
Translates to: KQLGLQVPNTTLGHLKDIHLDEE*KGKADL
Trigger: CAGGTCGGCTTTGCCCTTCCACTCTTCATCCAGGTG...AATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp AGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTCACCTGGATGAAGAGTaGAAGGGCAAAGCCGACCTG +
Preference number: 4 (lower is better)
Translates to: SSWDYRYLTPHLAISRTFHLDEE*KGKADL
Trigger: CAGGTCGGCTTTGCCCTTCCACTCTTCATCCAGGTG...AAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp TGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCACCTGGACTCCTTGTCCACCACCTaGATGAAGAGTGGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: CSLTLTFLSTWGCHLHLDSLSTT*MKSGRA
Trigger: TGCCCTTCCACTCTTCATCCAGGTGGTGGACAAGGA...GTCCAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp TGGGAATTCTCAACAGGTCCCCAAGGAAGGATGAGGCCACATTCCTCCAAGTCATCCTTGTCCACCACCTaGATGAAGAGTGGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: WEFSTGPQGRMRPHSSKSSLSTT*MKSGRA
Trigger: TGCCCTTCCACTCTTCATCCAGGTGGTGGACAAGGA...TGACTTGGAGGAATGTGGCCTCATCCTTCCTTGGGGACCTGTTGAGAATTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp CAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTAGGTCTCGTAGTCCAGTaGGATGGCCACCCGAATACG +
Preference number: 4 (lower is better)
Translates to: QLGLQVPNTTLGHLKDILGLVVQ*DGHPNT
Trigger: CGTATTCGGGTGGCCATCCCACTGGACTACGAGACC...TAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp CTCCATCACTGCTCAGCTGTGTGTACACTTAGACTTGTGATGTCTCTGGACCTTGGTCTCGTAGTCCAGTaGGATGGCCACCCGAATACG +
Preference number: 4 (lower is better)
Translates to: LHHCSAVCTLRLVMSLDLGLVVQ*DGHPNT
Trigger: CGTATTCGGGTGGCCATCCCACTGGACTACGAGACC...AAGGTCCAGAGACATCACAAGTCTAAGTGTACACACAGCTGAGCAGTGATGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp TGTCTTAGAATAGAAGCCCCTTCCCCATTCTCAGACGGTGTAATTCAGGCGGGGATGTTGTACAGTGGCTaGCTGAAGATGGGCCGGTTG +
Preference number: 4 (lower is better)
Translates to: CLRIEAPSPFSDGVIQAGMLYSG*LKMGRL
Trigger: CAACCGGCCCATCTTCAGCCAGCCACTGTACAACAT...CCCCGCCTGAATTACACCGTCTGAGAATGGGGAAGGGGCTTCTATTCTAAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS-3UTR CCA 90 bp AGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTGCTGATGTTGTACAGTaGCTGGCTGAAGATGGGCCG +
Preference number: 4 (lower is better)
Translates to: SSWDYRYLTPHLAISRTFADVVQ*LAEDGP
Trigger: CGGCCCATCTTCAGCCAGCCACTGTACAACATCAGC...AAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp CCGAGGACAACCGCAGCCACTGTGACTACATGGAATCTACCAAGATGTAATGGGGCATTGATCCGAAACTaGGTGGAGCCTTCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: PRTTAATVTTWNLPRCNGALIRN*VEPSKE
Trigger: CTCCTTGGAAGGCTCCACCCAGTTTCGGATCAATGC...CCCATTACATCTTGGTAGATTCCATGTAGTCACAGTGGCTGCGGTTGTCCTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCGGATGTATTCAGACTTaGTCTCTCGGTCAAGCAGAG +
Preference number: 4 (lower is better)
Translates to: QPLKQLGLQVPNTTLGHLGCIQT*SLGQAE
Trigger: CTCTGCTTGACCGAGAGACCAAGTCTGAATACATCC...GAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp TGGGAATTCTCAACAGGTCCCCAAGGAAGGATGAGGCCACATTCCTCCAAGTCATCCTTCCACGTGGGGTaGTTGTCATTGATGTCCAGG +
Preference number: 4 (lower is better)
Translates to: WEFSTGPQGRMRPHSSKSSFHVG*LSLMSR
Trigger: CCTGGACATCAATGACAACCACCCCACGTGGAAGGA...TGACTTGGAGGAATGTGGCCTCATCCTTCCTTGGGGACCTGTTGAGAATTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp AAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTCAACAGCCACCACCGTaGTCACATCAGAGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: KQLGLQVPNTTLGHLKDIQQPPP*SHQSLE
Trigger: CTCCAGACTCTGATGTGACCACGGTGGTGGCTGTTG...AATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp CTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCATCTGGGCCAACTTGTTGGGTGGCTaGATGCTGTACACCAGGGTG +
Preference number: 4 (lower is better)
Translates to: LLDERLLVKRCALVVIWANLLGG*MLYTRV
Trigger: CACCCTGGTGTACAGCATCCAGCCACCCAACAAGTT...GGCCCAGATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp TACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAGAGCCAGCATGGCGTGGGTaGTGCGGATCTTGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: YRYLTPHLAISRTFYDKEPAWRG*CGSCPW
Trigger: CCACGGGCAAGATCCGCACCACCCACGCCATGCTGG...CTCTTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp CATAACTCGTTCCTGGCCACAGAGCAAGTTATTGACAGAGTTGGTCTTAAGTTTATCAGCTCGGCCTCATaGGGGTCGGGGTTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: HNSFLATEQVIDRVGLKFISSAS*GSGFSR
Trigger: CCGGGAGAACCCCGACCCCCATGAGGCCGAGCTGAT...AAACTTAAGACCAACTCTGTCAATAACTTGCTCTGTGGCCAGGAACGAGTTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp AGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGCCAGTACACTGTGGCACTGCTaGTGGCTTTCAGAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: REHQSLLFISWAHIWEASTLWHC*WLSEGA
Trigger: GGCCCCCTCTGAAAGCCACCAGCAGTGCCACAGTGT...ACTGGCTTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp TCAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGCCACCACTTGGTAGATaGAGACCCCCGCCGGGATGC +
Preference number: 4 (lower is better)
Translates to: SKPEGTSVTSVYKLGTHLPPLGR*RPPPGC
Trigger: GCATCCCGGCGGGGGTCTCCATCTACCAAGTGGTGG...CAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp CCGAGGACAACCGCAGCCACTGTGACTACATGGAATCTACCAAGATGTAATGGGTTCACATCCAGCACATaGATGGTGAGCGTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: PRTTAATVTTWNLPRCNGFTSST*MVSVLV
Trigger: CACCAGCACGCTCACCATCCATGTGCTGGATGTGAA...CCCATTACATCTTGGTAGATTCCATGTAGTCACAGTGGCTGCGGTTGTCCTCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp AGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATCGGCCGGGAAGAAGGTaGGCGTCTCGTCGTTCACAT +
Preference number: 4 (lower is better)
Translates to: SWDYRYLTPHLAISRTFYRPGRR*ASRRSH
Trigger: ATGTGAACGACGAGACGCCCACCTTCTTCCCGGCCG...ATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp CTGCCTTTGAGCTTCTGTCTTGTTGCTGTTGCAGGAGCCATGAGCACAGAGGGCTGCTCTGCAGAAAGATaGGCCGGTTGTCATTCACAT +
Preference number: 4 (lower is better)
Translates to: LPLSFCLVAVAGAMSTEGCSAER*AGCHSH
Trigger: ATGTGAATGACAACCGGCCCATCTTTCTGCAGAGCA...GCCCTCTGTGCTCATGGCTCCTGCAACAGCAACAAGACAGAAGCTCAAAGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CCCAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCCATTCATCATGTAGCTaGTCTTGGTCTCGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: PSLSSSWDYRYLTPHLAIHSSCS*SWSRSP
Trigger: TGGACTACGAGACCAAGACCAGCTACATGATGAATG...GATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp GACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAACGCTGCAGAAGCCCTaGTTGAAGGGCGGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: DYRYLTPHLAISRTFYDKTLQKP*LKGGAW
Trigger: CCAGGCCCCGCCCTTCAACCAGGGCTTCTGCAGCGT...TTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp AAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTCCTCGTATGAGGCATTaGAGAACTGCACGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: KQLGLQVPNTTLGHLKDIPRMRH*RTARPR
Trigger: ACGAGGCCGTGCAGTTCTCCAATGCCTCATACGAGG...AATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp AAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGATGTAGACCTTCACGGTaGAGTCCACCTTGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: KPEGTSVTSVYKLGTHLGCRPSR*SPPWGR
Trigger: GCGGCCCCAAGGTGGACTCCACCGTGAAGGTCTACA...TCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp TGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCACCTGGACTTGGGACCTTCATCCTaGTCAGTGGCCATCATGGTG +
Preference number: 4 (lower is better)
Translates to: CSLTLTFLSTWGCHLHLDLGPSS*SVAIMV
Trigger: CACCATGATGGCCACTGACCAGGATGAAGGTCCCAA...GTCCAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp GAATGCTTGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCACTCGTAGGACTGCAGTaGCCGCTGTGTGGTCACCAA +
Preference number: 4 (lower is better)
Translates to: ECLFIDIDFLVHVGMPPPLVGLQ*PLCGHQ
Trigger: TTGGTGACCACACAGCGGCCACTGCAGTCCTACGAG...TGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACAAGCATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp TCAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGTGGTGCCCCAGAGTaGGGGCTCTCCACCATCTGT +
Preference number: 4 (lower is better)
Translates to: SKPEGTSVTSVYKLGTHLGGAPE*GLSTIC
Trigger: ACAGATGGTGGAGAGCCCCCACTCTGGGGCACCACC...CAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp AGCACTTGGATCACCACCTGCACTGAATTTTCGCGACGGTTGCTGGCTACATCCGATGAGGCCGCTGATTaGGTCGATGATGAAGAACTC +
Preference number: 4 (lower is better)
Translates to: STWITTCTEFSRRLLATSDEAAD*VDDEEL
Trigger: GAGTTCTTCATCATCGACCCAATCAGCGGCCTCATC...GGATGTAGCCAGCAACCGTCGCGAAAATTCAGTGCAGGTGGTGATCCAAGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TCAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGAGTCTCGTATGGCACTaGCTGGCCCAGGTCGCTGGC +
Preference number: 4 (lower is better)
Translates to: SKPEGTSVTSVYKLGTHLSLVWH*LAQVAG
Trigger: GCCAGCGACCTGGGCCAGCCAGTGCCATACGAGACT...CAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp AGATCTTATGAAGGTAGAGGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGAGTCAGCAGCTGGTACTaGGGGCTGCCTTTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: RSYEGRGQMLNERLAKVGVSSWY*GLPFGG
Trigger: GCCTCCAAAAGGCAGCCCCCAGTACCAGCTGCTGAC...TCCCACTTTTGCCAGACGCTCATTCAGCATCTGACCTCTACCTTCATAAGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp AACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGTCAGCAGCTGGTACTaGGGGCTGCCTTTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: NRREHQSLLFISWAHIWEVSSWY*GLPFGG
Trigger: GCCTCCAAAAGGCAGCCCCCAGTACCAGCTGCTGAC...TTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp TCAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGTCCACTGGTGGCTTGTaGCGGAAGCGCAGGCTACCC +
Preference number: 4 (lower is better)
Translates to: SKPEGTSVTSVYKLGTHLSTGGL*RKRRLP
Trigger: GGGTAGCCTGCGCTTCCGCCACAAGCCACCAGTGGA...CAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp CAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGCAGGGGTGTGGATTTaGCGGATTCTGTGCGGGCGT +
Preference number: 4 (lower is better)
Translates to: QNRREHQSLLFISWAHIWAGVWI*RILCGR
Trigger: ACGCCCGCACAGAATCCGCCAAATCCACACCCCTGC...CCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp AGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTGCCTGCAAGATGCTGTaGCCTTCAGGGATGTCCTCA +
Preference number: 4 (lower is better)
Translates to: SSWDYRYLTPHLAISRTFACKML*PSGMSS
Trigger: TGAGGACATCCCTGAAGGCCACAGCATCTTGCAGGC...AAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398809.9
CDS-3UTR CCA 90 bp CTTAGACTTGTGATGTCTCTGGACCTTGCTGTCTTAACCTGTGATGTGGCCATGAGGGCTCTCCAAGCATaGTCTTGGCAGCCGTCTTGG +
Preference number: 4 (lower is better)
Translates to: LRLVMSLDLAVLTCDVAMRALQA*SWQPSW
Trigger: CCAAGACGGCTGCCAAGACCATGCTTGGAGAGCCCT...CATGGCCACATCACAGGTTAAGACAGCAAGGTCCAGAGACATCACAAGTCTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp TCTGCCTTTGAGCTTCTGTCTTGTTGCTGTTGCAGGAGCCATGAGCACAGAGGGTGCCAAAGCCCAGCATaGAGAAGTTGCCAAATGGCA +
Preference number: 4 (lower is better)
Translates to: SAFELLSCCCCRSHEHRGCQSPA*RSCQMA
Trigger: TGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCA...CCCTCTGTGCTCATGGCTCCTGCAACAGCAACAAGACAGAAGCTCAAAGGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCATCTGGGCCTGCTGCAAGATGCTGTaGCCTTCAGGGATGTCCTCA +
Preference number: 4 (lower is better)
Translates to: LLDERLLVKRCALVVIWACCKML*PSGMSS
Trigger: TGAGGACATCCCTGAAGGCCACAGCATCTTGCAGCA...GGCCCAGATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466757.8
CDS-3UTR TCA 90 bp AAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTGTACTCGGAGCTGTTaGACTCCGGGGCATTGTCAT +
Preference number: 4 (lower is better)
Translates to: KQLGLQVPNTTLGHLKDICTRSC*TPGHCH
Trigger: ATGACAATGCCCCGGAGTTCAACAGCTCCGAGTACA...AATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp GTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTAGAACCTGTGCCAGCTCAGTaGTGGCCACGCTGTACTCGG +
Preference number: 4 (lower is better)
Translates to: VAHIYHLDLLSIQSLVLEPVPAQ*WPRCTR
Trigger: CCGAGTACAGCGTGGCCATCACTGAGCTGGCACAGG...TTCTAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS-3UTR TCA 90 bp TCAAAACCATCTGCCTCTAAACAGGTGGGAATTCTCAACAGGTCCCCAAGGAAGTGTACAGTGGCTGGCTaGAGATGGGCCGGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: SKPSASKQVGILNRSPRKCTVAG*RWAGCH
Trigger: ATGACAACCGGCCCATCTTCAGCCAGCCACTGTACA...CTTCCTTGGGGACCTGTTGAGAATTCCCACCTGTTTAGAGGCAGATGGTTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR TCA 90 bp CAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTAAGCCCTCGTACAGGCTaGTGTCGAAGTAGCTGCCAA +
Preference number: 4 (lower is better)
Translates to: QLGLQVPNTTLGHLKDILSPRTG*CRSSCQ
Trigger: TTGGCAGCTACTTCGACATCAGCCTGTACGAGGGCT...TAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp AGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGCCAGTAGTAGGCGGGCTTGCTaGAGGTGGGAGGGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: REHQSLLFISWAHIWEASSRRAC*RWEGCH
Trigger: ATGACAACCCTCCCACCTTCAGCAAGCCCGCCTACT...ACTGGCTTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp AGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATAGTAGGCGGGCTTGCTaGAGGTGGGAGGGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: SWDYRYLTPHLAISRTFYSRRAC*RWEGCH
Trigger: ATGACAACCCTCCCACCTTCAGCAAGCCCGCCTACT...ATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp AGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTCTTCCAAGGAGTAGATaGTGGACTCCTGGCCGTACT +
Preference number: 4 (lower is better)
Translates to: SSWDYRYLTPHLAISRTFLPRSR*WTPGRT
Trigger: AGTACGGCCAGGAGTCCATCATCTACTCCTTGGAAG...AAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp TCAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGCGCGGTAACCCACGCTaGACTTCCCATCCACGTTGC +
Preference number: 4 (lower is better)
Translates to: SKPEGTSVTSVYKLGTHLRGNPR*TSHPRC
Trigger: GCAACGTGGATGGGAAGTTCAGCGTGGGTTACCGCG...CAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp AAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTCAGGAGCCCATTGCTaGCATGGATCCGGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: KQLGLQVPNTTLGHLKDISGAHC*HGSGSC
Trigger: ACAACTTCCGGATCCATGTCAGCAATGGGCTCCTGA...AATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp CAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATTGGACCACGATGACTaGCGTTCCAATGCCTGCGGT +
Preference number: 4 (lower is better)
Translates to: QLGLQVPNTTLGHLKDILLDHDD*RSNACG
Trigger: ACCGCAGGCATTGGAACGTCAGTCATCGTGGTCCAA...TAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp CTCAAAGACAGCCTCCTGGTAGGAGGGCTGGTCAAAGATGGGGTTGTTGTCATTCAATCACTGAGAGAGTaGCCTCATAGGTGGCAACCA +
Preference number: 4 (lower is better)
Translates to: LKDSLLVGGLVKDGVVVIQSLRE*PHRWQP
Trigger: TGGTTGCCACCTATGAGGTCACTCTCTCAGTGATTG...AATGACAACAACCCCATCTTTGACCAGCCCTCCTACCAGGAGGCTGTCTTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp TCAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGCTGTCCGGTTGGCAATaGCCTTCCCTGCCGAGGAGT +
Preference number: 4 (lower is better)
Translates to: SKPEGTSVTSVYKLGTHLLSGWQ*PSLPRS
Trigger: ACTCCTCGGCAGGGAAGGTCATTGCCAACCGGACAG...CAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp AGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGCCAGTCACCCGTGGTGGGGTTaGTGGCAAACTTGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: REHQSLLFISWAHIWEASHPWWG*WQTCSL
Trigger: GAGAGAGCAAGTTTGCCATCAACCCCACCACGGGTG...ACTGGCTTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp GAATGCTTGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCAGCCAGGGCCCTCAAGTaGGTAGGTCAACTCTCCATT +
Preference number: 4 (lower is better)
Translates to: ECLFIDIDFLVHVGMPPPARALK*VGQLSI
Trigger: AATGGAGAGTTGACCTACTCACTTGAGGGCCCTGGC...TGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACAAGCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp AACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGTGGTGGCTGGTCGTTaGTGTCCTCTAGCACAACGC +
Preference number: 4 (lower is better)
Translates to: NRREHQSLLFISWAHIWEVVAGR*CPLAQR
Trigger: GCGTTGTGCTAGAGGACATCAACGACCAGCCACCAC...TTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp TCAAAACCATCTGCCTCTAAACAGGTGGGAATTCTCAACAGGTCCCCAAGGAAGCCAACAGTAGAGCCCTaGCCTCTTTTCCACCCTCAC +
Preference number: 4 (lower is better)
Translates to: SKPSASKQVGILNRSPRKPTVEP*PLFHPH
Trigger: GTGAGGGTGGAAAAGAGGTCAGGGCTCTACTGTTGG...CTTCCTTGGGGACCTGTTGAGAATTCCCACCTGTTTAGAGGCAGATGGTTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR TCA 90 bp TTACCTCCCTCTAGAATGAACCTTGGTAGATGCTCCCCGTCCCTGCAACCAACATACCTCCCTCTAGAATaGACCTTGGTAGATGCTCCC +
Preference number: 4 (lower is better)
Translates to: LPPSRMNLGRCSPSLQPTYLPLE*TLVDAP
Trigger: GGGAGCATCTACCAAGGTTCATTCTAGAGGGAGGTA...TGTTGGTTGCAGGGACGGGGAGCATCTACCAAGGTTCATTCTAGAGGGAGGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR TCA 90 bp AAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTCAGCCTCCAAACTCCTaGGCTGAAGCAATCTTCCTG +
Preference number: 4 (lower is better)
Translates to: KQLGLQVPNTTLGHLKDIQPPNS*AEAIFL
Trigger: CAGGAAGATTGCTTCAGCTCAGGAGTTTGGAGGCTG...AATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp CTGCCTTTGAGCTTCTGTCTTGTTGCTGTTGCAGGAGCCATGAGCACAGAGGGCCCTTCCAAGTCAATCTaGTCTCAAAAAGTGAGTCCG +
Preference number: 4 (lower is better)
Translates to: LPLSFCLVAVAGAMSTEGPSKSI*SQKVSP
Trigger: CGGACTCACTTTTTGAGATCAGATTGACTTGGAAGG...GCCCTCTGTGCTCATGGCTCCTGCAACAGCAACAAGACAGAAGCTCAAAGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR TCA 90 bp AAAAACATGGCAAGGACCCAACTAAACACACCCGTGGGCCCCCAGTTTGCAGCTTTCCCTTTAGTCAAGTaGAATGCTCAGCCTACACCG +
Preference number: 4 (lower is better)
Translates to: KNMARTQLNTPVGPQFAAFPLVK*NAQPTP
Trigger: CGGTGTAGGCTGAGCATTTCACTTGACTAAAGGGAA...AGCTGCAAACTGGGGGCCCACGGGTGTGTTTAGTTGGGTCCTTGCCATGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp CTGCGGCCTCTTACCATCCATAACTCGTTCCTGGCCACAGAGCAAGTTATTGACTGCTGTCTTAACCTGTaGTGTGGCCATGATGCTGTC +
Preference number: 4 (lower is better)
Translates to: LRPLTIHNSFLATEQVIDCCLNL*CGHDAV
Trigger: GACAGCATCATGGCCACATCACAGGTTAAGACAGCA...GTCAATAACTTGCTCTGTGGCCAGGAACGAGTTATGGATGGTAAGAGGCCGCAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp CTCCATCACTGCTCAGCTGTGTGTACACTTAGACTTGTGATGTCTCTGGACCTTCGATGGTGTAGCCAATaGCCCGGGGACGTCCTTTAT +
Preference number: 4 (lower is better)
Translates to: LHHCSAVCTLRLVMSLDLRWCSQ*PGDVLY
Trigger: ATAAAGGACGTCCCCGGGGCATTGGCTACACCATCG...AAGGTCCAGAGACATCACAAGTCTAAGTGTACACACAGCTGAGCAGTGATGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp CAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTACGATGGTGTAGCCAATaGCCCGGGGACGTCCTTTAT +
Preference number: 4 (lower is better)
Translates to: QLGLQVPNTTLGHLKDILRWCSQ*PGDVLY
Trigger: ATAAAGGACGTCCCCGGGGCATTGGCTACACCATCG...TAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp CTGCCTTTGAGCTTCTGTCTTGTTGCTGTTGCAGGAGCCATGAGCACAGAGGGCAGTCCAGGGCAAAGATaGTGTTGGTATTCCCTGAAA +
Preference number: 4 (lower is better)
Translates to: LPLSFCLVAVAGAMSTEGSPGQR*CWYSLK
Trigger: TTTCAGGGAATACCAACAGCATCTTTGCCCTGGACT...GCCCTCTGTGCTCATGGCTCCTGCAACAGCAACAAGACAGAAGCTCAAAGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp CCCAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCAGTACACCTCAAACATaGTGTTCAGGCCCAAATTCT +
Preference number: 4 (lower is better)
Translates to: PSLSSSWDYRYLTPHLAISTPQT*CSGPNS
Trigger: AGAATTTGGGCCTGAACAGCATGTTTGAGGTGTACT...GATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp ATGAGGATTGATTTGAAAATGCGGACAGGCCACCGCCCTCTTGTCTGCATGGCATTCCCCAAAGGTGCCTaGATCATTGTCAGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: MRIDLKMRTGHRPLVCMAFPKGA*IIVSCQ
Trigger: CTGGCAACTGACAATGATGCAGGCACCTTTGGGGAA...TGCCATGCAGACAAGAGGGCGGTGGCCTGTCCGCATTTTCAAATCAATCCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp TCAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAGTCTTCATCTGTTaGCCGGAGCCGCACCAGCTG +
Preference number: 4 (lower is better)
Translates to: SKPEGTSVTSVYKLGTHLGVFIC*PEPHQL
Trigger: CAGCTGGTGCGGCTCCGGGCAACAGATGAAGACTCC...CAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp AACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAACAGCACCGTGGCTCCTaGCATGATGTTCTCCACCAC +
Preference number: 4 (lower is better)
Translates to: NRREHQSLLFISWAHIWEQHRGS*HDVLHH
Trigger: GTGGTGGAGAACATCATGGCAGGAGCCACGGTGCTG...TTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp AGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTCAGAGACGACGATTTTaGGCATCAGCTCGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: SSWDYRYLTPHLAISRTFQRRRF*ASARPH
Trigger: ATGAGGCCGAGCTGATGCGCAAAATCGTCGTCTCTG...AAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp GACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAACTGCGCCCGACAGGATaGGGTAGTTCACCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: DYRYLTPHLAISRTFYDKLRPTG*GSSPGH
Trigger: GTGGCCTGGTGAACTACCGCATCCTGTCGGGCGCAG...TTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp AAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAGGGGCCGCCGTCATCTaGCACCACTGTCAAGGTATA +
Preference number: 4 (lower is better)
Translates to: KPEGTSVTSVYKLGTHLGGAAVI*HHCQGI
Trigger: TATACCTTGACAGTGGTGGCAGATGACGGCGGCCCC...TCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp CTCAAAGACAGCCTCCTGGTAGGAGGGCTGGTCAAAGATGGGGTTGTTGTCATTACTTGGATCACCACCTaGACTGAATTTTCGCGACGG +
Preference number: 4 (lower is better)
Translates to: LKDSLLVGGLVKDGVVVITWITT*TEFSRR
Trigger: CCGTCGCGAAAATTCAGTGCAGGTGGTGATCCAAGT...AATGACAACAACCCCATCTTTGACCAGCCCTCCTACCAGGAGGCTGTCTTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp AAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAGCCACCTGCAGCGGCTaGATAGTCTCGTATGGCACT +
Preference number: 4 (lower is better)
Translates to: KPEGTSVTSVYKLGTHLGATCSG*IVSYGT
Trigger: AGTGCCATACGAGACTATGCAGCCGCTGCAGGTGGC...TCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp TCAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGTCGGTGGCCACCCCTaGAGTGTACTCAGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: SKPEGTSVTSVYKLGTHLVGGHP*SVLSLG
Trigger: ACCAAGGCTGAGTACACTGCAGGGGTGGCCACCGAC...CAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp AGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGCCAGTACGGTGGATGGGTGCTaGTCACACCCACAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: REHQSLLFISWAHIWEASTVDGC*SHPQGF
Trigger: GAAGCCTTGTGGGTGTGAGCAGCACCCATCCACCGT...ACTGGCTTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp TGGGAATTCTCAACAGGTCCCCAAGGAAGGATGAGGCCACATTCCTCCAAGTCAATTCCTCCAAGTCACTaGTCTGTCACCCAGACTTGG +
Preference number: 4 (lower is better)
Translates to: WEFSTGPQGRMRPHSSKSIPPSH*SVTQTW
Trigger: CCAAGTCTGGGTGACAGAGCAGTGACTTGGAGGAAT...TGACTTGGAGGAATGTGGCCTCATCCTTCCTTGGGGACCTGTTGAGAATTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR GCA 90 bp AAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGATGGGGAGAGGGCGGCTaGATTCAGTCTGCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: KPEGTSVTSVYKLGTHLGWGEGG*IQSAKA
Trigger: AGCCTTTGCAGACTGAATGCAGCCGCCCTCTCCCCA...TCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp AGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATAAACTCGCCCTCATCTaGGTCCGTGGCTGCCTGCAA +
Preference number: 4 (lower is better)
Translates to: SWDYRYLTPHLAISRTFYKLALI*VRGCLQ
Trigger: TTGCAGGCAGCCACGGACGCAGATGAGGGCGAGTTT...ATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398809.9
CDS-3UTR GCA 90 bp TACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAGAGAGAAATGGTGCTCCCTaGCCCCAGCCCCTCACCGTG +
Preference number: 4 (lower is better)
Translates to: YRYLTPHLAISRTFYDKERNGAP*PQPLTV
Trigger: CACGGTGAGGGGCTGGGGGCAGGGAGCACCATTTCT...CTCTTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp AGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGCTGGAGTGCAGTGGTaGAAACGCAGCTCACTGCAG +
Preference number: 4 (lower is better)
Translates to: SWDYRYLTPHLAISRTFYAGVQW*KRSSLQ
Trigger: CTGCAGTGAGCTGCGTTTGCACCACTGCACTCCAGC...ATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp CCGAGGACAACCGCAGCCACTGTGACTACATGGAATCTACCAAGATGTAATGGGGGGCAGAGGTGTGGGTaGACACCCAAATTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: PRTTAATVTTWNLPRCNGGQRCG*TPKLFS
Trigger: TGAAAACAATTTGGGTGTGCACCCACACCTCTGCCC...CCCATTACATCTTGGTAGATTCCATGTAGTCACAGTGGCTGCGGTTGTCCTCGG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp TCCAGGTGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTTCCAGCATGGAGAAGTTaGCAAATGGCAAAGGTTCCC +
Preference number: 4 (lower is better)
Translates to: SRCQSPAWRSCQMAKVPFPAWRS*QMAKVP
Trigger: GGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGG...AAAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCACCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp CTCCATCACTGCTCAGCTGTGTGTACACTTAGACTTGTGATGTCTCTGGACCTTTACTGTGACCCACAATaGAGCCAGCCAAGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: LHHCSAVCTLRLVMSLDLYCDPQ*SQPSLP
Trigger: GGGAAGGCTTGGCTGGCTGCATTGTGGGTCACAGTA...AAGGTCCAGAGACATCACAAGTCTAAGTGTACACACAGCTGAGCAGTGATGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp GCAATGTTGTCATACTCCTGGATGGCAGCCCGCAGGTATCGGTCATCATCAGGCGGGGCAGAGAAGACATaGTGTTTTAGTGCTTTGTCA +
Preference number: 4 (lower is better)
Translates to: AMLSYSWMAARRYRSSSGGAEKT*CFSALS
Trigger: TGACAAAGCACTAAAACAGCATGTCTTCTCTGCCCC...GCCTGATGATGACCGATACCTGCGGGCTGCCATCCAGGAGTATGACAACATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642965.1
CDS-3UTR CCA 90 bp CAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTTATGTATCAAAGAAGTaGTTGGTGAAGAAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: QQRGMWRKCSETWTGVGCYVSKK*LVKKGS
Trigger: GCTGCCCTTCTTCACCAACCACTTCTTTGATACATA...ACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp TCTACCTGTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAAGACTATGTATCAAAGAAGTaGTTGGTGAAGAAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: STCRSSCFRDRCCRLQEDYVSKK*LVKKGS
Trigger: GCTGCCCTTCTTCACCAACCACTTCTTTGATACATA...GTCTTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp GTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTAGAACGCGGGCGCTGTCAATaGCGAAGAATTGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: VAHIYHLDLLSIQSLVLERGRCQ*RRIGRG
Trigger: CCCCCTCCCAATTCTTCGCCATTGACAGCGCCCGCG...TTCTAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646131.1
CDS-3UTR CCA 90 bp AGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAATGGGGTCCATGTCCTaGACATCTGTGATGATGATG +
Preference number: 4 (lower is better)
Translates to: SLSSSWDYRYLTPHLAISMGSMS*TSVMMM
Trigger: CATCATCATCACAGATGTCCAGGACATGGACCCCAT...TGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp TCCAGGTGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTTGGACGTCCTTTATCCTaGTCTATGGCGGTGATGATG +
Preference number: 4 (lower is better)
Translates to: SRCQSPAWRSCQMAKVPFGRPLS*SMAVMM
Trigger: CATCATCACCGCCATAGACCAGGATAAAGGACGTCC...AAAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCACCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp TGTCTTAGAATAGAAGCCCCTTCCCCATTCTCAGACGGTGTAATTCAGGCGGGGGGACGTCCTTTATCCTaGTCTATGGCGGTGATGATG +
Preference number: 4 (lower is better)
Translates to: CLRIEAPSPFSDGVIQAGGRPLS*SMAVMM
Trigger: CATCATCACCGCCATAGACCAGGATAAAGGACGTCC...CCCCGCCTGAATTACACCGTCTGAGAATGGGGAAGGGGCTTCTATTCTAAGACA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000646131.1
CDS-3UTR CCA 90 bp TGTCTTAGAATAGAAGCCCCTTCCCCATTCTCAGACGGTGTAATTCAGGCGGGGGAGATGATGAAGTGGTaGGAGTTGTTCCCCACCAAG +
Preference number: 4 (lower is better)
Translates to: CLRIEAPSPFSDGVIQAGEMMKW*ELFPTK
Trigger: CTTGGTGGGGAACAACTCCCACCACTTCATCATCTC...CCCCGCCTGAATTACACCGTCTGAGAATGGGGAAGGGGCTTCTATTCTAAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS-3UTR CCA 90 bp TGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTTAGTCAAGGGGAGATGATGAAGTaGTGGGAGTTGTTCCCCACC +
Preference number: 4 (lower is better)
Translates to: CQSPAWRSCQMAKVPFSQGEMMK*WELFPT
Trigger: GGTGGGGAACAACTCCCACCACTTCATCATCTCCCC...TTGACTAAAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp TACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAGAGATGTCCGCCTTCCCCTaGACGGAGGTCGGGGAGATG +
Preference number: 4 (lower is better)
Translates to: YRYLTPHLAISRTFYDKEMSAFP*TEVGEM
Trigger: CATCTCCCCGACCTCCGTCCAGGGGAAGGCGGACAT...CTCTTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp GTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTAGAAATGTCCGCCTTCCCCTaGACGGAGGTCGGGGAGATG +
Preference number: 4 (lower is better)
Translates to: VAHIYHLDLLSIQSLVLEMSAFP*TEVGEM
Trigger: CATCTCCCCGACCTCCGTCCAGGGGAAGGCGGACAT...TTCTAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS-3UTR CCA 90 bp TGTGTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTAATGTCCGCCTTCCCCTaGACGGAGGTCGGGGAGATG +
Preference number: 4 (lower is better)
Translates to: CVAHIYHLDLLSIQSLVLMSAFP*TEVGEM
Trigger: CATCTCCCCGACCTCCGTCCAGGGGAAGGCGGACAT...TAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS-3UTR CCA 90 bp AAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTCGTAGTCCAGTGGGATaGCCACCCGAATACGAATGT +
Preference number: 4 (lower is better)
Translates to: KQLGLQVPNTTLGHLKDIRSPVG*PPEYEC
Trigger: ACATTCGTATTCGGGTGGCCATCCCACTGGACTACG...AATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp CTCCATCACTGCTCAGCTGTGTGTACACTTAGACTTGTGATGTCTCTGGACCTTGCTGATGTTGTACAGTaGCTGGCTGAAGATGGGCCG +
Preference number: 4 (lower is better)
Translates to: LHHCSAVCTLRLVMSLDLADVVQ*LAEDGP
Trigger: CGGCCCATCTTCAGCCAGCCACTGTACAACATCAGC...AAGGTCCAGAGACATCACAAGTCTAAGTGTACACACAGCTGAGCAGTGATGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTAGCTGATGTTGTACAGTaGCTGGCTGAAGATGGGCCG +
Preference number: 4 (lower is better)
Translates to: QLGLQVPNTTLGHLKDILADVVQ*LAEDGP
Trigger: CGGCCCATCTTCAGCCAGCCACTGTACAACATCAGC...TAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGGATAAATCAGCCCATTaGATATCTGTTCATAATCCA +
Preference number: 4 (lower is better)
Translates to: WEGGGPVWPLSAQPEPSWDKSAH*ISVHNP
Trigger: TGGATTATGAACAGATATCCAATGGGCTGATTTATC...CCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GGCCACATTCCTCCAAGTCACTGCTCTGTCACCCAGACTTGGGGCGGGGAGTGGGATAAATCAGCCCATTaGATATCTGTTCATAATCCA +
Preference number: 4 (lower is better)
Translates to: GHIPPSHCSVTQTWGGEWDKSAH*ISVHNP
Trigger: TGGATTATGAACAGATATCCAATGGGCTGATTTATC...CCACTCCCCGCCCCAAGTCTGGGTGACAGAGCAGTGACTTGGAGGAATGTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp ATGCGGACAGGCCACCGCCCTCTTGTCTGCATGGCAGATGGGCACAGGGTGGAAGATAAATCAGCCCATTaGATATCTGTTCATAATCCA +
Preference number: 4 (lower is better)
Translates to: MRTGHRPLVCMADGHRVEDKSAH*ISVHNP
Trigger: TGGATTATGAACAGATATCCAATGGGCTGATTTATC...TTCCACCCTGTGCCCATCTGCCATGCAGACAAGAGGGCGGTGGCCTGTCCGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp AAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTGCATTGATCCGAAACTaGGTGGAGCCTTCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: KQLGLQVPNTTLGHLKDIALIRN*VEPSKE
Trigger: CTCCTTGGAAGGCTCCACCCAGTTTCGGATCAATGC...AATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp CTCCAGGTGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTGGATGTATTCAGACTTaGTCTCTCGGTCAAGCAGAG +
Preference number: 4 (lower is better)
Translates to: LQVPKPSMEKLPNGKGSLGCIQT*SLGQAE
Trigger: CTCTGCTTGACCGAGAGACCAAGTCTGAATACATCC...AAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCACCTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp AGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTCCTTCCACGTGGGGTaGTTGTCATTGATGTCCAGG +
Preference number: 4 (lower is better)
Translates to: SSWDYRYLTPHLAISRTFSFHVG*LSLMSR
Trigger: CCTGGACATCAATGACAACCACCCCACGTGGAAGGA...AAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp CAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTAGGTCACATCAGAGTCTaGAGGGGTCATCTCCACCAG +
Preference number: 4 (lower is better)
Translates to: QLGLQVPNTTLGHLKDILGHIRV*RGHLHQ
Trigger: CTGGTGGAGATGACCCCTCCAGACTCTGATGTGACC...TAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp CTTAGACTTGTGATGTCTCTGGACCTTGCTGTCTTAACCTGTGATGTGGCCATGGGTCACATCAGAGTCTaGAGGGGTCATCTCCACCAG +
Preference number: 4 (lower is better)
Translates to: LRLVMSLDLAVLTCDVAMGHIRV*RGHLHQ
Trigger: CTGGTGGAGATGACCCCTCCAGACTCTGATGTGACC...CATGGCCACATCACAGGTTAAGACAGCAAGGTCCAGAGACATCACAAGTCTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp AACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAATTCTCCCCCAGGTCTaGGTCAACAGCCACCACCGT +
Preference number: 4 (lower is better)
Translates to: NRREHQSLLFISWAHIWEILPQV*VNSHHR
Trigger: ACGGTGGTGGCTGTTGACCCAGACCTGGGGGAGAAT...TTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp AAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTAACTTGTTGGGTGGCTaGATGCTGTACACCAGGGTG +
Preference number: 4 (lower is better)
Translates to: KQLGLQVPNTTLGHLKDINLLGG*MLYTRV
Trigger: CACCCTGGTGTACAGCATCCAGCCACCCAACAAGTT...AATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp CGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCATCTAACTTGTTGGGTGGCTaGATGCTGTACACCAGGGTG +
Preference number: 4 (lower is better)
Translates to: RCCLMKDFWSRDVHSWSSNLLGG*MLYTRV
Trigger: CACCCTGGTGTACAGCATCCAGCCACCCAACAAGTT...AGATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp GACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAACTGTGGCACTGCTGGTaGCTTTCAGAGGGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: DYRYLTPHLAISRTFYDKLWHCW*LSEGAC
Trigger: GCAGGCCCCCTCTGAAAGCCACCAGCAGTGCCACAG...TTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp AAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTCACATCCAGCACATaGATGGTGAGCGTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: KQLGLQVPNTTLGHLKDIFTSST*MVSVLV
Trigger: CACCAGCACGCTCACCATCCATGTGCTGGATGTGAA...AATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp GACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAACACCCGGAACTCGCGTaGCACGTCCTCGGACACAGA +
Preference number: 4 (lower is better)
Translates to: DYRYLTPHLAISRTFYDKHPELA*HVLGHR
Trigger: TCTGTGTCCGAGGACGTGCCACGCGAGTTCCGGGTG...TTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp AGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTCGGAAGTTGTTGCCATaGTTACCATGGAGGATGCGG +
Preference number: 4 (lower is better)
Translates to: SSWDYRYLTPHLAISRTFRKLLP*LPWRMR
Trigger: CCGCATCCTCCATGGTAACCATGGCAACAACTTCCG...AAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp AGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGCCAGTTCCACTATCAGCACGTaGGATGAGTTCCGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: REHQSLLFISWAHIWEASSTIST*DEFRSR
Trigger: CCGGGAGCGGAACTCATCCCACGTGCTGATAGTGGA...ACTGGCTTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp AGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTCTCGGTCTGTGGCTTaGACCACGATGACTGACGTT +
Preference number: 4 (lower is better)
Translates to: SSWDYRYLTPHLAISRTFSRSVA*TTMTDV
Trigger: AACGTCAGTCATCGTGGTCCAAGCCACAGACCGAGA...AAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp GGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGATCTGAGCAGCTGATGCGGTCATGTAGCTGGTCTTaGTCTCGTAGTCCAGGTAAT +
Preference number: 4 (lower is better)
Translates to: GQMLNERLAKVGSEQLMRSCSWS*SRSPGN
Trigger: ATTACCTGGACTACGAGACCAAGACCAGCTACATGA...CCGCATCAGCTGCTCAGATCCCACTTTTGCCAGACGCTCATTCAGCATCTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp TCAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAGGATGGTGCCGTTaGGTGGGCGCACAAAGACAG +
Preference number: 4 (lower is better)
Translates to: SKPEGTSVTSVYKLGTHLGGWCR*VGAQRQ
Trigger: CTGTCTTTGTGCGCCCACCCAACGGCACCATCCTCC...CAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp AGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGCCAGTAGACCTCGTACACGTTaGAGCGCAGCGGGATCTCCT +
Preference number: 4 (lower is better)
Translates to: REHQSLLFISWAHIWEASRPRTR*SAAGSP
Trigger: AGGAGATCCCGCTGCGCTCCAACGTGTACGAGGTCT...ACTGGCTTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp TGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCACCTGGACCCATCGGGCTGCAGATaGAAGTTCTTCTCTTCGTTG +
Preference number: 4 (lower is better)
Translates to: CSLTLTFLSTWGCHLHLDPSGCR*KFFSSL
Trigger: CAACGAAGAGAAGAACTTCCATCTGCAGCCCGATGG...GTCCAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp GAATGCTTGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCACCCATGGTGAAGACCTaGCCCACATCTTCAGAGTCG +
Preference number: 4 (lower is better)
Translates to: ECLFIDIDFLVHVGMPPPPMVKT*PTSSES
Trigger: CGACTCTGAAGATGTGGGCCAGGTCTTCACCATGGG...TGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACAAGCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp CTGAGGCTCTGGCAAGAAGAAAAGGTAGCAAAGTGGGCAAGGGAGGAGTGGAGGCCCTTCTTGTCCACATaGAACTGCACATTGTCAGTA +
Preference number: 4 (lower is better)
Translates to: LRLWQEEKVAKWAREEWRPFLST*NCTLSV
Trigger: TACTGACAATGTGCAGTTCCATGTGGACAAGAAGGG...CCTCCACTCCTCCCTTGCCCACTTTGCTACCTTTTCTTCTTGCCAGAGCCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642965.1
CDS-3UTR CCA 90 bp GAATGCTTGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCATGTCATACTCCTGGATaGCAGCCCGCAGGTATCGGT +
Preference number: 4 (lower is better)
Translates to: ECLFIDIDFLVHVGMPPPCHTPG*QPAGIG
Trigger: ACCGATACCTGCGGGCTGCCATCCAGGAGTATGACA...TGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACAAGCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp TGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCACCTGGACATGTTGTCATACTCCTaGATGGCAGCCCGCAGGTAT +
Preference number: 4 (lower is better)
Translates to: CSLTLTFLSTWGCHLHLDMLSYS*MAARRY
Trigger: ATACCTGCGGGCTGCCATCCAGGAGTATGACAACAT...GTCCAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp AGATCTTATGAAGGTAGAGGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGAGGAGGAGGGCCTGTTTaGCCTCTTTCAGCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: RSYEGRGQMLNERLAKVGGGGPV*PLSAQP
Trigger: AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCC...TCCCACTTTTGCCAGACGCTCATTCAGCATCTGACCTCTACCTTCATAAGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCACCTGGACAGCTGGGCACACATTTaGGAAGCCAGTGAAATGGAG +
Preference number: 4 (lower is better)
Translates to: CSLTLTFLSTWGCHLHLDSWAHI*EASEME
Trigger: CTCCATTTCACTGGCTTCCCAAATGTGTGCCCAGCT...GTCCAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp GGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGATCTGAGCAGCTGATGCGGCTTCTGTTTATAAGCTaGGCACACATTTGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: GQMLNERLAKVGSEQLMRLLFIS*AHIWEA
Trigger: GGCTTCCCAAATGTGTGCCCAGCTTATAAACAGAAG...CCGCATCAGCTGCTCAGATCCCACTTTTGCCAGACGCTCATTCAGCATCTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp CTCCATCACTGCTCAGCTGTGTGTACACTTAGACTTGTGATGTCTCTGGACCTTTGTCTGCATGGCAGATaGGCACAGGGTGGAACAGGA +
Preference number: 4 (lower is better)
Translates to: LHHCSAVCTLRLVMSLDLCLHGR*AQGGTG
Trigger: TCCTGTTCCACCCTGTGCCCATCTGCCATGCAGACA...AAGGTCCAGAGACATCACAAGTCTAAGTGTACACACAGCTGAGCAGTGATGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CTGCCTTTGAGCTTCTGTCTTGTTGCTGTTGCAGGAGCCATGAGCACAGAGGGCATTTCTGGCTTCTCTTaGGAAACTGACAGAGCTGAC +
Preference number: 4 (lower is better)
Translates to: LPLSFCLVAVAGAMSTEGISGFS*ETDRAD
Trigger: GTCAGCTCTGTCAGTTTCCCAAGAGAAGCCAGAAAT...GCCCTCTGTGCTCATGGCTCCTGCAACAGCAACAAGACAGAAGCTCAAAGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp TGTCTTAGAATAGAAGCCCCTTCCCCATTCTCAGACGGTGTAATTCAGGCGGGGGATGACACAACCAACTaGGCCGATGAGAATCTGCTG +
Preference number: 4 (lower is better)
Translates to: CLRIEAPSPFSDGVIQAGDDTTN*ADENLL
Trigger: CAGCAGATTCTCATCGGCCCAGTTGGTTGTGTCATC...CCCCGCCTGAATTACACCGTCTGAGAATGGGGAAGGGGCTTCTATTCTAAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
3UTR CAA 72 bp GGTCCTTTTTGTCTATGTCTTCTCTTTCCTACCAGCTaGGGAGCTTGCAGAGAGCCAGACATTGTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: GPFCLCLLFPTS*GACREPDIVQP
Trigger: GGGCTGGACAATGTCTGGCTCTCTGCAAGCTCCCAAGCTGGTAGGAAAGAGAAGACATAGACAAAAAGGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CAA 72 bp CAAGTCCTGCCCACACTAGGGATGCTATCTGTGGTTTaGGTGAGTGCTTTGCTGATGACCCGTCAAAGCAGT +
Preference number: 4 (lower is better)
Translates to: QVLPTLGMLSVV*VSALLMTRQSS
Trigger: ACTGCTTTGACGGGTCATCAGCAAAGCACTCACCAAAACCACAGATAGCATCCCTAGTGTGGGCAGGACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CAA 72 bp GTGATCCCAAAGGGCTTGAACTGGGGCGTATTGTCATaGACGTCCAGGACGTTGACAGTCAGCTTGGCATTT +
Preference number: 4 (lower is better)
Translates to: VIPKGLNWGVLS*TSRTLTVSLAF
Trigger: AAATGCCAAGCTGACTGTCAACGTCCTGGACGTCAATGACAATACGCCCCAGTTCAAGCCCTTTGGGATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CAA 72 bp CCCTTCTTGTCCACATGGAACTGCACATTGTCAGTATaGACAATGGCCCCAGTGATGTTGGAGAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: PFLSTWNCTLSV*TMAPVMLESRW
Trigger: CCACCTGCTCTCCAACATCACTGGGGCCATTGTCAATACTGACAATGTGCAGTTCCATGTGGACAAGAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTACAGGCGTGTCCTCGCTaGTCAGCAGGTATGTATCAA +
Preference number: 4 (lower is better)
Translates to: QLGLQVPNTTLGHLKDILQACPR*SAGMYQ
Trigger: TTGATACATACCTGCTGATCAGCGAGGACACGCCTG...TAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp TGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTTAGTCAACAGGCGTGTCCTCGCTaGTCAGCAGGTATGTATCAA +
Preference number: 4 (lower is better)
Translates to: CQSPAWRSCQMAKVPFSQQACPR*SAGMYQ
Trigger: TTGATACATACCTGCTGATCAGCGAGGACACGCCTG...TTGACTAAAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR TCA 90 bp AGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATCTCCACGGTGAACTCTaGCTTGGTCTCTCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: SWDYRYLTPHLAISRTFYLHGEL*LGLSVQ
Trigger: CTGGACAGAGAGACCAAGTCAGAGTTCACCGTGGAG...ATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp AGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATAGGTCAGCACTCCGCTaGTGTAGTCCAGGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: SWDYRYLTPHLAISRTFYRSALR*CSPGQR
Trigger: TCTTTGCCCTGGACTACATCAGCGGAGTGCTGACCT...ATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp AGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATTGTCCACCACCTGGATaGAGAGTGGAAGGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: SWDYRYLTPHLAISRTFYCPPPG*RVEGQS
Trigger: GCTTTGCCCTTCCACTCTTCATCCAGGTGGTGGACA...ATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp AACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAATGTACAGTGGCTGGCTaGAGATGGGCCGGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: NRREHQSLLFISWAHIWECTVAG*RWAGCH
Trigger: ATGACAACCGGCCCATCTTCAGCCAGCCACTGTACA...TTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp AGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATCGTTCTCGTACAGGCTaGTGTTGTACAGTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SWDYRYLTPHLAISRTFYRSRTG*CCTVAG
Trigger: GCCAGCCACTGTACAACATCAGCCTGTACGAGAACG...ATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp CAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTACTTCCAAGGAGTAGATaGTGGACTCCTGGCCGTACT +
Preference number: 4 (lower is better)
Translates to: QLGLQVPNTTLGHLKDILLPRSR*WTPGRT
Trigger: AGTACGGCCAGGAGTCCATCATCTACTCCTTGGAAG...TAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp CAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTACCACTGCGCGAACGATaGGGATGTATTCAGACTTGG +
Preference number: 4 (lower is better)
Translates to: QLGLQVPNTTLGHLKDILPLRER*GCIQTW
Trigger: CCAAGTCTGAATACATCCTCATCGTTCGCGCAGTGG...TAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp CTGCGGCCTCTTACCATCCATAACTCGTTCCTGGCCACAGAGCAAGTTATTGACACAAAAGGCAGGTTCTaGAAGGTGGGGTCATTGTCA +
Preference number: 4 (lower is better)
Translates to: LRPLTIHNSFLATEQVIDTKGRF*KVGSLS
Trigger: TGACAATGACCCCACCTTTCAGAACCTGCCTTTTGT...GTCAATAACTTGCTCTGTGGCCAGGAACGAGTTATGGATGGTAAGAGGCCGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp GACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAATATCAGCACGTGGGATaGGTTCCGCTCCCGGTCCAG +
Preference number: 4 (lower is better)
Translates to: DYRYLTPHLAISRTFYDKYQHVG*VPLPVQ
Trigger: CTGGACCGGGAGCGGAACTCATCCCACGTGCTGATA...TTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp AACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAATGGCTTGGACCACGATaGCTGACGTTCCAATGCCTG +
Preference number: 4 (lower is better)
Translates to: NRREHQSLLFISWAHIWEWLGPR*LTFQCL
Trigger: CAGGCATTGGAACGTCAGTCATCGTGGTCCAAGCCA...TTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp AAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAGATGGCAGCCTCGTATaGGGCATTGGAGAACTGCAC +
Preference number: 4 (lower is better)
Translates to: KPEGTSVTSVYKLGTHLGDGSLV*GIGELH
Trigger: GTGCAGTTCTCCAATGCCTCATACGAGGCTGCCATC...TCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp AAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGACACCGGTGCTGCTGTTaGTGTCAAAGAGGCCACTCT +
Preference number: 4 (lower is better)
Translates to: KPEGTSVTSVYKLGTHLGHRCCC*CQRGHS
Trigger: AGAGTGGCCTCTTTGACATCAACAGCAGCACCGGTG...TCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp GAATGCTTGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCATGTGACTTGAAGGACTaGGAATCCAGGCGGGCAGTT +
Preference number: 4 (lower is better)
Translates to: ECLFIDIDFLVHVGMPPPCDLKD*ESRRAV
Trigger: AACTGCCCGCCTGGATTCTCAGTCCTTCAAGTCACA...TGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACAAGCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp AAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAACTCTAGCTTTGGGTTaGGGTCGTGGTCAATGGCCG +
Preference number: 4 (lower is better)
Translates to: KPEGTSVTSVYKLGTHLGTLALG*GRGQWP
Trigger: CGGCCATTGACCACGACCTCAACCCAAAGCTAGAGT...TCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp GAGGAAGAGAGAAGAGGGTTAACATCAGTTAGTTCAGGGTGCAGCAGGGATGGACAATCACTGAGAGAGTaGCCTCATAGGTGGCAACCA +
Preference number: 4 (lower is better)
Translates to: EEERRGLTSVSSGCSRDGQSLRE*PHRWQP
Trigger: TGGTTGCCACCTATGAGGTCACTCTCTCAGTGATTG...TCCATCCCTGCTGCACCCTGAACTAACTGATGTTAACCCTCTTCTCTCTTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642965.1
CDS-3UTR TCA 90 bp TGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCACCTGGACCAAGGCTGTACTCAATaGGTGCAAAGTTGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: CSLTLTFLSTWGCHLHLDQGCTQ*VQSCLS
Trigger: ACTCAGGCAACTTTGCACTCATTGAGTACAGCCTTG...GTCCAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp GTGGCCATGATGCTGTCCAGTTTAACAGTGCCTTGCCCCCATCCACATTCCCTAGGCCAATGCCAGTGGTaGAATTCTGACATTTCAAGA +
Preference number: 4 (lower is better)
Translates to: VAMMLSSLTVPCPHPHSLGQCQW*NSDISR
Trigger: TCTTGAAATGTCAGAATTTCACCACTGGCATTGGCC...TAGGGAATGTGGATGGGGGCAAGGCACTGTTAAACTGGACAGCATCATGGCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR TCA 90 bp ATGAGGATTGATTTGAAAATGCGGACAGGCCACCGCCCTCTTGTCTGCATGGCACTGCGTCTAATGGGATaGTCTTCAGTGGGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: MRIDLKMRTGHRPLVCMALRLMG*SSVGKE
Trigger: TTCCTTTCCCACTGAAGATCATCCCATTAGACGCAG...TGCCATGCAGACAAGAGGGCGGTGGCCTGTCCGCATTTTCAAATCAATCCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR TCA 90 bp CTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCATCTGGGCCGCTGGCCAGGATCTGTaGGCATTTTTATTACAACCC +
Preference number: 4 (lower is better)
Translates to: LLDERLLVKRCALVVIWAAGQDL*AFLLQP
Trigger: GGGTTGTAATAAAAATGCTCACAGATCCTGGCCAGC...GGCCCAGATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp CAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTAGTGTATTCTCAGGGATaGGGACGCTGTAGGGCTGAT +
Preference number: 4 (lower is better)
Translates to: QLGLQVPNTTLGHLKDILVYSQG*GRCRAD
Trigger: ATCAGCCCTACAGCGTCCGCATCCCTGAGAATACAC...TAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp CTCCAGGTGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTAGTCCAGGGCAAAGATaGTGTTGGTATTCCCTGAAA +
Preference number: 4 (lower is better)
Translates to: LQVPKPSMEKLPNGKGSLSPGQR*CWYSLK
Trigger: TTTCAGGGAATACCAACAGCATCTTTGCCCTGGACT...AAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCACCTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp AGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGTCCAGGGCAAAGATaGTGTTGGTATTCCCTGAAA +
Preference number: 4 (lower is better)
Translates to: SLSSSWDYRYLTPHLAISSPGQR*CWYSLK
Trigger: TTTCAGGGAATACCAACAGCATCTTTGCCCTGGACT...TGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp GACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAGGCAAAGCCGACCTGTaGCAGCTCAGTGATGGCCAC +
Preference number: 4 (lower is better)
Translates to: DYRYLTPHLAISRTFYDKGKADL*QLSDGH
Trigger: GTGGCCATCACTGAGCTGGCACAGGTCGGCTTTGCC...TTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp GTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTAGAAGGCAAAGCCGACCTGTaGCAGCTCAGTGATGGCCAC +
Preference number: 4 (lower is better)
Translates to: VAHIYHLDLLSIQSLVLEGKADL*QLSDGH
Trigger: GTGGCCATCACTGAGCTGGCACAGGTCGGCTTTGCC...TTCTAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS-3UTR GCA 90 bp ACCCGTGGGCCCCCAGTTTGCAGCTTTGGTATTAGATTACTGCTAGGGACCCTGAGTACACCTCAAACATaGTGTTCAGGCCCAAATTCT +
Preference number: 4 (lower is better)
Translates to: TRGPPVCSFGIRLLLGTLSTPQT*CSGPNS
Trigger: AGAATTTGGGCCTGAACAGCATGTTTGAGGTGTACT...CAGGGTCCCTAGCAGTAATCTAATACCAAAGCTGCAAACTGGGGGCCCACGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp AAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTGCTGCCAAAGGCAGATaGACTGACAATGCTGTAGGT +
Preference number: 4 (lower is better)
Translates to: KQLGLQVPNTTLGHLKDIAAKGR*TDNAVG
Trigger: ACCTACAGCATTGTCAGTGCATCTGCCTTTGGCAGC...AATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp AAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTGTTTACGGTGGCGATaGCAGTTTTCTGGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: KQLGLQVPNTTLGHLKDICLRWR*QFSGCG
Trigger: GCCACAACCAGAAAACTGGCATCGCCACCGTAAACA...AATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp TGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTTAGTCAACAGAGACGACGATTTTaGGCATCAGCTCGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: CQSPAWRSCQMAKVPFSQQRRRF*ASARPH
Trigger: ATGAGGCCGAGCTGATGCGCAAAATCGTCGTCTCTG...TTGACTAAAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp CAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTACAGAGACGACGATTTTaGGCATCAGCTCGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: QLGLQVPNTTLGHLKDILQRRRF*ASARPH
Trigger: ATGAGGCCGAGCTGATGCGCAAAATCGTCGTCTCTG...TAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp GACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAAGCTCTTGGTGGGCGTaGCTGCATCACTGGCCACCA +
Preference number: 4 (lower is better)
Translates to: DYRYLTPHLAISRTFYDKSSWWA*LHHWPP
Trigger: TGGTGGCCAGTGATGCAGGCACGCCCACCAAGAGCT...TTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp TGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTTAGTCAAGAAGTAGCTGAGCTCTaGATTGAGGCCCACGTCGTT +
Preference number: 4 (lower is better)
Translates to: CQSPAWRSCQMAKVPFSQEVAEL*IEAHVV
Trigger: AACGACGTGGGCCTCAATGCAGAGCTCAGCTACTTC...TTGACTAAAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp CATAACTCGTTCCTGGCCACAGAGCAAGTTATTGACAGAGTTGGTCTTAAGTTTCGAACACGGTGGCTGTaGCCGTGTGTCGCTTCCCTA +
Preference number: 4 (lower is better)
Translates to: HNSFLATEQVIDRVGLKFRTRWL*PCVASL
Trigger: TAGGGAAGCGACACACGGGCACAGCCACCGTGTTCG...AAACTTAAGACCAACTCTGTCAATAACTTGCTCTGTGGCCAGGAACGAGTTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp GACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAACCCAGACGGCTGTACTaGTGCTGTGTGAACACGGGG +
Preference number: 4 (lower is better)
Translates to: DYRYLTPHLAISRTFYDKPRRLY*CCVNTG
Trigger: CCCCGTGTTCACACAGCAGCAGTACAGCCGTCTGGG...TTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp GACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAGAGGCATTGGAGAACTaGACGGCCTCGTCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: DYRYLTPHLAISRTFYDKEALEN*TASSSS
Trigger: CGAGCTGGACGAGGCCGTGCAGTTCTCCAATGCCTC...TTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp AGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTAATCTCAGTACCCAGTaGCAGATTCTCCAGGATGGC +
Preference number: 4 (lower is better)
Translates to: SSWDYRYLTPHLAISRTFNLSTQ*QILQDG
Trigger: GCCATCCTGGAGAATCTGGCACTGGGTACTGAGATT...AAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp TCAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGACAACGCGCACCTCCTaGAGTGTGAGGTCAGCAACC +
Preference number: 4 (lower is better)
Translates to: SKPEGTSVTSVYKLGTHLTTRTS*SVRSAT
Trigger: GGTTGCTGACCTCACACTGCAGGAGGTGCGCGTTGT...CAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp AGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGCCAGTGTTGTTGCCAATGTCTaGATCCAGGGCCAGCACCTG +
Preference number: 4 (lower is better)
Translates to: REHQSLLFISWAHIWEASVVANV*IQGQHL
Trigger: CAGGTGCTGGCCCTGGATGCAGACATTGGCAACAAC...ACTGGCTTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp TCAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGTCCACGTCCAGGATaGGGTTGGTATCGCGGTTCA +
Preference number: 4 (lower is better)
Translates to: SKPEGTSVTSVYKLGTHLGPRPG*GWYRGS
Trigger: TGAACCGCGATACCAACCGCATCCTGGACGTGGACC...CAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp AAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTAAGAGGAGAGTGCTGTaGACACAGAAGGAGCTCAAC +
Preference number: 4 (lower is better)
Translates to: KQLGLQVPNTTLGHLKDIKRRVL*TQKELN
Trigger: GTTGAGCTCCTTCTGTGTGCACAGCACTCTCCTCTT...AATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp CCGAGGACAACCGCAGCCACTGTGACTACATGGAATCTACCAAGATGTAATGGGCGTGGGCCCCCAGTTTaGAGCTTTGGTATTAGATTA +
Preference number: 4 (lower is better)
Translates to: PRTTAATVTTWNLPRCNGRGPPV*SFGIRL
Trigger: TAATCTAATACCAAAGCTGCAAACTGGGGGCCCACG...CCCATTACATCTTGGTAGATTCCATGTAGTCACAGTGGCTGCGGTTGTCCTCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp AATCATGGGGCCTTACCTCCCTCTAGAATGAACCTTGGTAGATGCTCCCCGTCCGCTGATTGTGAAATGTaGGCGCGTTGTCATTCACAT +
Preference number: 4 (lower is better)
Translates to: NHGALPPSRMNLGRCSPSADCEM*ARCHSH
Trigger: ATGTGAATGACAACGCGCCCACATTTCACAATCAGC...GGACGGGGAGCATCTACCAAGGTTCATTCTAGAGGGAGGTAAGGCCCCATGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp CTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGGCTGATTGTGAAATGTaGGCGCGTTGTCATTCACAT +
Preference number: 4 (lower is better)
Translates to: LSSSWDYRYLTPHLAISRADCEM*ARCHSH
Trigger: ATGTGAATGACAACGCGCCCACATTTCACAATCAGC...CCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp AGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAGCTGATTGTGAAATGTaGGCGCGTTGTCATTCACAT +
Preference number: 4 (lower is better)
Translates to: SLSSSWDYRYLTPHLAISADCEM*ARCHSH
Trigger: ATGTGAATGACAACGCGCCCACATTTCACAATCAGC...TGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp TGTGTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTAGCTGGTAGGCCTGTGTaGTCTCGTAGTCCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: CVAHIYHLDLLSIQSLVLAGRPV*SRSPAP
Trigger: GGGAGCTGGACTACGAGACCACACAGGCCTACCAGC...TAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646131.1
CDS-3UTR CCA 90 bp AGATCTTATGAAGGTAGAGGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGAGGGTGGACAGAGGCCTaGTCTTGTCTTGATCTGTGG +
Preference number: 4 (lower is better)
Translates to: RSYEGRGQMLNERLAKVGGWTEA*SCLDLW
Trigger: CCACAGATCAAGACAAGACCAGGCCTCTGTCCACCC...TCCCACTTTTGCCAGACGCTCATTCAGCATCTGACCTCTACCTTCATAAGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp CTAAACAGGTGGGAATTCTCAACAGGTCCCCAAGGAAGGATGAGGCCACATTCCATGGGGTCCATGTCCTaGACATCTGTGATGATGATG +
Preference number: 4 (lower is better)
Translates to: LNRWEFSTGPQGRMRPHSMGSMS*TSVMMM
Trigger: CATCATCATCACAGATGTCCAGGACATGGACCCCAT...GGAATGTGGCCTCATCCTTCCTTGGGGACCTGTTGAGAATTCCCACCTGTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp ATGAGGATTGATTTGAAAATGCGGACAGGCCACCGCCCTCTTGTCTGCATGGCAATGGGGTCCATGTCCTaGACATCTGTGATGATGATG +
Preference number: 4 (lower is better)
Translates to: MRIDLKMRTGHRPLVCMAMGSMS*TSVMMM
Trigger: CATCATCATCACAGATGTCCAGGACATGGACCCCAT...TGCCATGCAGACAAGAGGGCGGTGGCCTGTCCGCATTTTCAAATCAATCCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCATCTGGACGTCCTTTATCCTaGTCTATGGCGGTGATGATG +
Preference number: 4 (lower is better)
Translates to: RCCLMKDFWSRDVHSWSSGRPLS*SMAVMM
Trigger: CATCATCACCGCCATAGACCAGGATAAAGGACGTCC...AGATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp AGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGCCAGTCACCTGGATGAAGAGTaGAAGGGCAAAGCCGACCTG +
Preference number: 4 (lower is better)
Translates to: REHQSLLFISWAHIWEASHLDEE*KGKADL
Trigger: CAGGTCGGCTTTGCCCTTCCACTCTTCATCCAGGTG...ACTGGCTTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp AAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTGAGATGATGAAGTGGTaGGAGTTGTTCCCCACCAAG +
Preference number: 4 (lower is better)
Translates to: KQLGLQVPNTTLGHLKDIEMMKW*ELFPTK
Trigger: CTTGGTGGGGAACAACTCCCACCACTTCATCATCTC...AATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp CTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGCAGGCACACTCTCATTaGCAAAGAGATCAAAGTCGT +
Preference number: 4 (lower is better)
Translates to: LSSSWDYRYLTPHLAISRQAHSH*QRDQSR
Trigger: ACGACTTTGATCTCTTTGCCAATGAGAGTGTGCCTG...CCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp TCAAAACCATCTGCCTCTAAACAGGTGGGAATTCTCAACAGGTCCCCAAGGAAGATGTTGTACAGTGGCTaGCTGAAGATGGGCCGGTTG +
Preference number: 4 (lower is better)
Translates to: SKPSASKQVGILNRSPRKMLYSG*LKMGRL
Trigger: CAACCGGCCCATCTTCAGCCAGCCACTGTACAACAT...CTTCCTTGGGGACCTGTTGAGAATTCCCACCTGTTTAGAGGCAGATGGTTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp TGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTTAGTCAAATGTTGTACAGTGGCTaGCTGAAGATGGGCCGGTTG +
Preference number: 4 (lower is better)
Translates to: CQSPAWRSCQMAKVPFSQMLYSG*LKMGRL
Trigger: CAACCGGCCCATCTTCAGCCAGCCACTGTACAACAT...TTGACTAAAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp TGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTTAGTCAATCCTTCCACGTGGGGTaGTTGTCATTGATGTCCAGG +
Preference number: 4 (lower is better)
Translates to: CQSPAWRSCQMAKVPFSQSFHVG*LSLMSR
Trigger: CCTGGACATCAATGACAACCACCCCACGTGGAAGGA...TTGACTAAAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGCAACAGCCACCACCGTaGTCACATCAGAGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: QNRREHQSLLFISWAHIWQQPPP*SHQSLE
Trigger: CTCCAGACTCTGATGTGACCACGGTGGTGGCTGTTG...CCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GAATGCTTGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCAAACTTGTTGGGTGGCTaGATGCTGTACACCAGGGTG +
Preference number: 4 (lower is better)
Translates to: ECLFIDIDFLVHVGMPPPNLLGG*MLYTRV
Trigger: CACCCTGGTGTACAGCATCCAGCCACCCAACAAGTT...TGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACAAGCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp AGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTGGCTGTAGAACTTGTTaGGTGGCTGGATGCTGTACA +
Preference number: 4 (lower is better)
Translates to: SSWDYRYLTPHLAISRTFGCRTC*VAGCCT
Trigger: TGTACAGCATCCAGCCACCCAACAAGTTCTACAGCC...AAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp GACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAATGGTGGAGCTCTTGGTaGGCGTGCCTGCATCACTGG +
Preference number: 4 (lower is better)
Translates to: DYRYLTPHLAISRTFYDKWWSSW*ACLHHW
Trigger: CCAGTGATGCAGGCACGCCCACCAAGAGCTCCACCA...TTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp GGAGATCAAAACCATCTGCCTCTAAACAGGTGGGAATTCTCAACAGGTCCCCAATTCACATCCAGCACATaGATGGTGAGCGTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: GDQNHLPLNRWEFSTGPQFTSST*MVSVLV
Trigger: CACCAGCACGCTCACCATCCATGTGCTGGATGTGAA...TTGGGGACCTGTTGAGAATTCCCACCTGTTTAGAGGCAGATGGTTTTGATCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp CAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTACGGAAGTTGTTGCCATaGTTACCATGGAGGATGCGG +
Preference number: 4 (lower is better)
Translates to: QLGLQVPNTTLGHLKDILRKLLP*LPWRMR
Trigger: CCGCATCCTCCATGGTAACCATGGCAACAACTTCCG...TAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp TCAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGATGGTGATGAGCAGGTaGGCCGTGCTGTTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: SKPEGTSVTSVYKLGTHLMVMSR*AVLLSS
Trigger: GCTGCTCAACAGCACGGCCCACCTGCTCATCACCAT...CAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp AACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAATTTCGCGACGGTTGCTaGCTACATCCCCAGGGTTGT +
Preference number: 4 (lower is better)
Translates to: NRREHQSLLFISWAHIWEFRDGC*LHPQGC
Trigger: ACAACCCTGGGGATGTAGCCAGCAACCGTCGCGAAA...TTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp AAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGACTTGGTGAAGCGTGGTaGCTGGTCGTTGATGTCCTC +
Preference number: 4 (lower is better)
Translates to: KPEGTSVTSVYKLGTHLGLGEAW*LVVDVL
Trigger: GAGGACATCAACGACCAGCCACCACGCTTCACCAAG...TCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp TCAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAGGAGGGCCTGTTTaGCCTCTTTCAGCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: SKPEGTSVTSVYKLGTHLGGGPV*PLSAQP
Trigger: AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCC...CAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp AGATCTTATGAAGGTAGAGGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGAACTTTCTTGTCCACGTaGGGATGCCACCTCCACCTG +
Preference number: 4 (lower is better)
Translates to: RSYEGRGQMLNERLAKVGTFLST*GCHLHL
Trigger: CAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGT...TCCCACTTTTGCCAGACGCTCATTCAGCATCTGACCTCTACCTTCATAAGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp CAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATTAGATTGGAAGAAATaGTGCTCCCTGCCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: QLGLQVPNTTLGHLKDILLDWKK*CSLPPA
Trigger: GGCTGGGGGCAGGGAGCACCATTTCTTCCAATCTAA...TAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp CAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCCAATGTTGGTTAGATTaGAAGAAATGGTGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: QPLKQLGLQVPNTTLGHLQCWLD*KKWCSL
Trigger: CAGGGAGCACCATTTCTTCCAATCTAACCAACATTG...GAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp AGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTAGCCTCTCAAGCAGCTaGGACTACAGGTACCTAACA +
Preference number: 4 (lower is better)
Translates to: SSWDYRYLTPHLAISRTFSLSSS*DYRYLT
Trigger: TGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCT...AAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp CATAACTCGTTCCTGGCCACAGAGCAAGTTATTGACAGAGTTGGTCTTAAGTTTTCTCCCTCTGAGCCTTaGAGCTGTTGCGCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: HNSFLATEQVIDRVGLKFSPSEP*SCCACS
Trigger: GGAGCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGA...AAACTTAAGACCAACTCTGTCAATAACTTGCTCTGTGGCCAGGAACGAGTTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp CATAACTCGTTCCTGGCCACAGAGCAAGTTATTGACAGAGTTGGTCTTAAGTTTGTACAGAGTGAAGCGTaGCCCAGCCTGGGTGTGTCC +
Preference number: 4 (lower is better)
Translates to: HNSFLATEQVIDRVGLKFVQSEA*PSLGVS
Trigger: GGACACACCCAGGCTGGGCCACGCTTCACTCTGTAC...AAACTTAAGACCAACTCTGTCAATAACTTGCTCTGTGGCCAGGAACGAGTTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp AAAAACATGGCAAGGACCCAACTAAACACACCCGTGGGCCCCCAGTTTGCAGCTGGAGAAGTTGCCAAATaGCAAAGGTTCCCTTTAGTC +
Preference number: 4 (lower is better)
Translates to: KNMARTQLNTPVGPQFAAGEVAK*QRFPLV
Trigger: GACTAAAGGGAACCTTTGCCATTTGGCAACTTCTCC...AGCTGCAAACTGGGGGCCCACGGGTGTGTTTAGTTGGGTCCTTGCCATGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CTCCATCACTGCTCAGCTGTGTGTACACTTAGACTTGTGATGTCTCTGGACCTTGTTTCCCACCTGTCGTaGGAGCAAGTTGGACTGCAT +
Preference number: 4 (lower is better)
Translates to: LHHCSAVCTLRLVMSLDLVSHLS*EQVGLH
Trigger: ATGCAGTCCAACTTGCTCCCACGACAGGTGGGAAAC...AAGGTCCAGAGACATCACAAGTCTAAGTGTACACACAGCTGAGCAGTGATGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CAA 72 bp AATGGAGAGAATGCTTGTTCATTGACATTGACTTTCTaGTCCACGTGGGGATGCCACCTCCACCTGGACGTC +
Preference number: 4 (lower is better)
Translates to: NGENACSLTLTF*STWGCHLHLDV
Trigger: GACGTCCAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACAAGCATTCTCTCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR CAA 72 bp AGCAGTTCTGTCTGCGCAAAGTTCACCCGGCCCTTCTaGTCCACATGGAACTGCACATTGTCAGTATTGACA +
Preference number: 4 (lower is better)
Translates to: SSSVCAKFTRPF*STWNCTLSVLT
Trigger: TGTCAATACTGACAATGTGCAGTTCCATGTGGACAAGAAGGGCCGGGTGAACTTTGCGCAGACAGAACTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CAA 72 bp AGCCACACAGGGTTGGCTCCATCAAAGGAGTACTTGTaGGTGTTAGGCATGTCCATGATGTCGATGAAGCCA +
Preference number: 4 (lower is better)
Translates to: SHTGLAPSKEYL*VLGMSMMSMKP
Trigger: TGGCTTCATCGACATCATGGACATGCCTAACACCAACAAGTACTCCTTTGATGGAGCCAACCCTGTGTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CAA 72 bp TCCAGCCACACAGGGTTGGCTCCATCAAAGGAGTACTaGTTGGTGTTAGGCATGTCCATGATGTCGATGAAG +
Preference number: 4 (lower is better)
Translates to: SSHTGLAPSKEY*LVLGMSMMSMK
Trigger: CTTCATCGACATCATGGACATGCCTAACACCAACAAGTACTCCTTTGATGGAGCCAACCCTGTGTGGCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp GTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTAGAACTGTGGCATTCACGATaGAGATGGGCGTCCCCACTG +
Preference number: 4 (lower is better)
Translates to: VAHIYHLDLLSIQSLVLELWHSR*RWASPL
Trigger: CAGTGGGGACGCCCATCTTCATCGTGAATGCCACAG...TTCTAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646131.1
CDS-3UTR TCA 90 bp TCAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGAGCCCTCGTACAGGCTaGTGTCGAAGTAGCTGCCAA +
Preference number: 4 (lower is better)
Translates to: SKPEGTSVTSVYKLGTHLSPRTG*CRSSCQ
Trigger: TTGGCAGCTACTTCGACATCAGCCTGTACGAGGGCT...CAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp AGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGCCAGTCCACTGCGCGAACGATaGGGATGTATTCAGACTTGG +
Preference number: 4 (lower is better)
Translates to: REHQSLLFISWAHIWEASPLRER*GCIQTW
Trigger: CCAAGTCTGAATACATCCTCATCGTTCGCGCAGTGG...ACTGGCTTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp AGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATTCATCTCCACCAGGTTaGTGTAGTAGGGTGCGTCCT +
Preference number: 4 (lower is better)
Translates to: SWDYRYLTPHLAISRTFYSSPPG*CSRVRP
Trigger: AGGACGCACCCTACTACATCAACCTGGTGGAGATGA...ATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp GACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAATCACATCCAGGACAGTaGCGAACACGGTGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: DYRYLTPHLAISRTFYDKSHPGQ*RTRWLC
Trigger: GCACAGCCACCGTGTTCGTCACTGTCCTGGATGTGA...TTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp AGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATTCAGGAGCCCATTGCTaGCATGGATCCGGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: SWDYRYLTPHLAISRTFYSGAHC*HGSGSC
Trigger: ACAACTTCCGGATCCATGTCAGCAATGGGCTCCTGA...ATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp GAATGCTTGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCACAATCACTGAGAGAGTaGCCTCATAGGTGGCAACCA +
Preference number: 4 (lower is better)
Translates to: ECLFIDIDFLVHVGMPPPQSLRE*PHRWQP
Trigger: TGGTTGCCACCTATGAGGTCACTCTCTCAGTGATTG...TGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACAAGCATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp AACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGAGTGCAAAGTTGCCTaGGTCAGCATCAGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: NRREHQSLLFISWAHIWEECKVA*VSISGS
Trigger: ACTGCCACTGATGCTGACTCAGGCAACTTTGCACTC...TTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp AGATCTTATGAAGGTAGAGGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGAGATCACCACCTGCACTaGATTTTCGCGACGGTTGCT +
Preference number: 4 (lower is better)
Translates to: RSYEGRGQMLNERLAKVGDHHLH*IFATVA
Trigger: AGCAACCGTCGCGAAAATTCAGTGCAGGTGGTGATC...TCCCACTTTTGCCAGACGCTCATTCAGCATCTGACCTCTACCTTCATAAGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp AGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGCCAGTCATACACGCTTGTGCTaGACTGGGGCTTGGAGAACT +
Preference number: 4 (lower is better)
Translates to: REHQSLLFISWAHIWEASHTRLC*TGAWRT
Trigger: AGTTCTCCAAGCCCCAGTTCAGCACAAGCGTGTATG...ACTGGCTTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp TCAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGCCAGGGCCCTCAAGTaGGTAGGTCAACTCTCCATT +
Preference number: 4 (lower is better)
Translates to: SKPEGTSVTSVYKLGTHLARALK*VGQLSI
Trigger: AATGGAGAGTTGACCTACTCACTTGAGGGCCCTGGC...CAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp AGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCACTCAAGGACATTTTATaGCAAAGAGGAGAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: SLSSSWDYRYLTPHLAISLKDIL*QRGECC
Trigger: ACAGCACTCTCCTCTTTGTCATAAAATGTCCTTGAG...TGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp GTGGCCATGATGCTGTCCAGTTTAACAGTGCCTTGCCCCCATCCACATTCCCTATCTGATCTCAAAAAGTaGGTCCGGCTTCACAAGAAA +
Preference number: 4 (lower is better)
Translates to: VAMMLSSLTVPCPHPHSLSDLKK*VRLHKK
Trigger: TTTCTTGTGAAGCCGGACTCACTTTTTGAGATCAGA...TAGGGAATGTGGATGGGGGCAAGGCACTGTTAAACTGGACAGCATCATGGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR TCA 90 bp CCGAGGACAACCGCAGCCACTGTGACTACATGGAATCTACCAAGATGTAATGGGAAACTCCAGGAAAACTaGAAGACCTGTCACCCACTA +
Preference number: 4 (lower is better)
Translates to: PRTTAATVTTWNLPRCNGKLQEN*KTCHPL
Trigger: TAGTGGGTGACAGGTCTTTCAGTTTTCCTGGAGTTT...CCCATTACATCTTGGTAGATTCCATGTAGTCACAGTGGCTGCGGTTGTCCTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR TCA 90 bp AGGATGGGCTTCTCAGAATCCCAAACCCTTGACCTCTCCTCACAACGCGAGGGTTTTCTAGCCTCATCTTaGTCCAAAACTCCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: RMGFSESQTLDLSSQREGFLASS*SKTPGK
Trigger: TTTTCCTGGAGTTTTGGATCAAGATGAGGCTAGAAA...ACCCTCGCGTTGTGAGGAGAGGTCAAGGGTTTGGGATTCTGAGAAGCCCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR TCA 90 bp TGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTTAGTCAACAGCTGATCTGCCTTTaGGCTTCTGTCTTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: CQSPAWRSCQMAKVPFSQQLICL*ASVLLL
Trigger: CAGCAACAAGACAGAAGCTCAAAGGCAGATCAGCTG...TTGACTAAAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp GACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAACAGCACCGTGGCTCCTaGCATGATGTTCTCCACCAC +
Preference number: 4 (lower is better)
Translates to: DYRYLTPHLAISRTFYDKQHRGS*HDVLHH
Trigger: GTGGTGGAGAACATCATGGCAGGAGCCACGGTGCTG...TTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp TCAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGTTGATGTAGTAGGGTaGGTCCTTCCACGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: SKPEGTSVTSVYKLGTHLVDVVG*VLPRGV
Trigger: CACCCCACGTGGAAGGACGCACCCTACTACATCAAC...CAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp TACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAGAGTGCTGTACACCAGGGTaGCATTCTCCCCCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: YRYLTPHLAISRTFYDKECCTPG*HSPPGL
Trigger: CAGACCTGGGGGAGAATGGCACCCTGGTGTACAGCA...CTCTTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp AGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGAAGTAGCTGAGCTCTaGATTGAGGCCCACGTCGTT +
Preference number: 4 (lower is better)
Translates to: SWDYRYLTPHLAISRTFYEVAEL*IEAHVV
Trigger: AACGACGTGGGCCTCAATGCAGAGCTCAGCTACTTC...ATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp TACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAGAGCGCTGGCCTCATAGCTaGTCTGCAGAAAGATGGGCC +
Preference number: 4 (lower is better)
Translates to: YRYLTPHLAISRTFYDKERWPHS*SAERWA
Trigger: GGCCCATCTTTCTGCAGAGCAGCTATGAGGCCAGCG...CTCTTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp TACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAGAGCTCAAACTTCCCCTCTaGGCCCGACAGGATGCGGTA +
Preference number: 4 (lower is better)
Translates to: YRYLTPHLAISRTFYDKELKLPL*ARQDAV
Trigger: TACCGCATCCTGTCGGGCGCAGAGGGGAAGTTTGAG...CTCTTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp AGATCTTATGAAGGTAGAGGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGAAATTTTCGCGACGGTTaGTGGCTACATCCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: RSYEGRGQMLNERLAKVGNFRDG*WLHPQG
Trigger: ACCCTGGGGATGTAGCCAGCAACCGTCGCGAAAATT...TCCCACTTTTGCCAGACGCTCATTCAGCATCTGACCTCTACCTTCATAAGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp AACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAACGATGATCGCCATCTaGAGGGCAGACATGTCATCC +
Preference number: 4 (lower is better)
Translates to: NRREHQSLLFISWAHIWETMIAI*RADMSS
Trigger: GGATGACATGTCTGCCCTGCAGATGGCGATCATCGT...TTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp CAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGACGATGATCGCCATCTaGAGGGCAGACATGTCATCC +
Preference number: 4 (lower is better)
Translates to: QNRREHQSLLFISWAHIWTMIAI*RADMSS
Trigger: GGATGACATGTCTGCCCTGCAGATGGCGATCATCGT...CCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp TACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAGAGGATTGGAAGAAATGGTaGTCCCTGCCCCCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: YRYLTPHLAISRTFYDKEDWKKW*SLPPAP
Trigger: AGGGGCTGGGGGCAGGGAGCACCATTTCTTCCAATC...CTCTTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp CTTAGACTTGTGATGTCTCTGGACCTTGCTGTCTTAACCTGTGATGTGGCCATGGAGCTTCTGTCTTGTTaGTGTTGCAGGAGCCATGAG +
Preference number: 4 (lower is better)
Translates to: LRLVMSLDLAVLTCDVAMELLSC*CCRSHE
Trigger: CTCATGGCTCCTGCAACAGCAACAAGACAGAAGCTC...CATGGCCACATCACAGGTTAAGACAGCAAGGTCCAGAGACATCACAAGTCTAAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp TACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAGAGAAAAGCCAGGCCACGTaGCAGCTGGTGGCAACATGG +
Preference number: 4 (lower is better)
Translates to: YRYLTPHLAISRTFYDKEKSQAT*QLVATW
Trigger: CCATGTTGCCACCAGCTGCCACGTGGCCTGGCTTTT...CTCTTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp AGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATTCTTGGGCCAGCAACTaGGTCACAGAAGAACCCACA +
Preference number: 4 (lower is better)
Translates to: SWDYRYLTPHLAISRTFYSWASN*VTEEPT
Trigger: TGTGGGTTCTTCTGTGACCCAGTTGCTGGCCCAAGA...ATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp TACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAGAGCGTGTGATCACCCCCTaGTGGTCGCTGACAGAGAAC +
Preference number: 4 (lower is better)
Translates to: YRYLTPHLAISRTFYDKERVITP*WSLTEN
Trigger: GTTCTCTGTCAGCGACCACCAGGGGGTGATCACACG...CTCTTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp GTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTAGAAGATGGGCGTCCCCACTaGTGTATTCTCAGGGATGCG +
Preference number: 4 (lower is better)
Translates to: VAHIYHLDLLSIQSLVLEDGRPH*CILRDA
Trigger: CGCATCCCTGAGAATACACCAGTGGGGACGCCCATC...TTCTAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646131.1
CDS-3UTR CCA 90 bp TGTGTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTACCAAGTTGGCCAGGGTaGACAGAGGCCTGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: CVAHIYHLDLLSIQSLVLPSWPG*TEAWSC
Trigger: ACAAGACCAGGCCTCTGTCCACCCTGGCCAACTTGG...TAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646131.1
CDS-3UTR CCA 90 bp CGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCATCTATGGGGTCCATGTCCTaGACATCTGTGATGATGATG +
Preference number: 4 (lower is better)
Translates to: RCCLMKDFWSRDVHSWSSMGSMS*TSVMMM
Trigger: CATCATCATCACAGATGTCCAGGACATGGACCCCAT...AGATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTAGGACGTCCTTTATCCTaGTCTATGGCGGTGATGATG +
Preference number: 4 (lower is better)
Translates to: QLGLQVPNTTLGHLKDILGRPLS*SMAVMM
Trigger: CATCATCACCGCCATAGACCAGGATAAAGGACGTCC...TAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp GTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTAGAAGGTCTCGTAGTCCAGTaGGATGGCCACCCGAATACG +
Preference number: 4 (lower is better)
Translates to: VAHIYHLDLLSIQSLVLEGLVVQ*DGHPNT
Trigger: CGTATTCGGGTGGCCATCCCACTGGACTACGAGACC...TTCTAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS-3UTR CCA 90 bp GACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAGGTCTCGTAGTCCAGTaGGATGGCCACCCGAATACG +
Preference number: 4 (lower is better)
Translates to: DYRYLTPHLAISRTFYDKGLVVQ*DGHPNT
Trigger: CGTATTCGGGTGGCCATCCCACTGGACTACGAGACC...TTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp GACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAAGCGGTCCAGGTCTGTaGCATTCAGGAACAGCACCG +
Preference number: 4 (lower is better)
Translates to: DYRYLTPHLAISRTFYDKSGPGL*HSGTAP
Trigger: CGGTGCTGTTCCTGAATGCCACAGACCTGGACCGCT...TTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp AGATCTTATGAAGGTAGAGGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGAGCATTGATCCGAAACTaGGTGGAGCCTTCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: RSYEGRGQMLNERLAKVGALIRN*VEPSKE
Trigger: CTCCTTGGAAGGCTCCACCCAGTTTCGGATCAATGC...TCCCACTTTTGCCAGACGCTCATTCAGCATCTGACCTCTACCTTCATAAGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp CGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCATCTGGATGTATTCAGACTTaGTCTCTCGGTCAAGCAGAG +
Preference number: 4 (lower is better)
Translates to: RCCLMKDFWSRDVHSWSSGCIQT*SLGQAE
Trigger: CTCTGCTTGACCGAGAGACCAAGTCTGAATACATCC...AGATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp TACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAGAGCCAGTTTTCTGGTTGTaGCCCACACCCCCGTCCACT +
Preference number: 4 (lower is better)
Translates to: YRYLTPHLAISRTFYDKEPVFWL*PTPPST
Trigger: AGTGGACGGGGGTGTGGGCCACAACCAGAAAACTGG...CTCTTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp CAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATTGCCATGGTTACCATaGAGGATGCGGTACCACACA +
Preference number: 4 (lower is better)
Translates to: QLGLQVPNTTLGHLKDILLPWLP*RMRYHT
Trigger: TGTGTGGTACCGCATCCTCCATGGTAACCATGGCAA...TAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp GACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAATCCACTATCAGCACGTaGGATGAGTTCCGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: DYRYLTPHLAISRTFYDKSTIST*DEFRSR
Trigger: CCGGGAGCGGAACTCATCCCACGTGCTGATAGTGGA...TTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp TACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAGAGTCCACTATCAGCACGTaGGATGAGTTCCGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: YRYLTPHLAISRTFYDKESTIST*DEFRSR
Trigger: CCGGGAGCGGAACTCATCCCACGTGCTGATAGTGGA...CTCTTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp AGATCTTATGAAGGTAGAGGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGAGGGGCTCTCGATGACTaGAGGGTTGTCATTGATGTC +
Preference number: 4 (lower is better)
Translates to: RSYEGRGQMLNERLAKVGGALDD*RVVIDV
Trigger: GACATCAATGACAACCCTCCAGTCATCGAGAGCCCC...TCCCACTTTTGCCAGACGCTCATTCAGCATCTGACCTCTACCTTCATAAGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp AGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGCCAGTGCTCCTCTCTGTCGATaGTGGCATTACCAACACGGA +
Preference number: 4 (lower is better)
Translates to: REHQSLLFISWAHIWEASAPLCR*WHYQHG
Trigger: TCCGTGTTGGTAATGCCACCATCGACAGAGAGGAGC...ACTGGCTTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GAATGCTTGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCAGCTCTGGTAGGTCGCTaGCATTGTCAATCACTGAGA +
Preference number: 4 (lower is better)
Translates to: ECLFIDIDFLVHVGMPPPALVGR*HCQSLR
Trigger: TCTCAGTGATTGACAATGCCAGCGACCTACCAGAGC...TGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACAAGCATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp CAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGATCTCCTCTCTGATGTaGAGGATGGTGCCGTTGGGT +
Preference number: 4 (lower is better)
Translates to: QNRREHQSLLFISWAHIWISSLM*RMVPLG
Trigger: ACCCAACGGCACCATCCTCCACATCAGAGAGGAGAT...CCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp CAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGCATCTTCAGAGTCGTTaGCAAGGGCCCGGAAGTAGT +
Preference number: 4 (lower is better)
Translates to: QNRREHQSLLFISWAHIWHLQSR*QGPGSS
Trigger: ACTACTTCCGGGCCCTTGCCAACGACTCTGAAGATG...CCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp AGATCTTATGAAGGTAGAGGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGATTCTCATCGATCATCTaGATCACCCGGTCCACGTCC +
Preference number: 4 (lower is better)
Translates to: RSYEGRGQMLNERLAKVGFSSII*ITRSTS
Trigger: GGACGTGGACCGGGTGATCCAGATGATCGATGAGAA...TCCCACTTTTGCCAGACGCTCATTCAGCATCTGACCTCTACCTTCATAAGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp AACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAATTCTCATCGATCATCTaGATCACCCGGTCCACGTCC +
Preference number: 4 (lower is better)
Translates to: NRREHQSLLFISWAHIWEFSSII*ITRSTS
Trigger: GGACGTGGACCGGGTGATCCAGATGATCGATGAGAA...TTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp AACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAACCCTCACGAATGATCTaGCCCAGCTTGGCAATGTTG +
Preference number: 4 (lower is better)
Translates to: NRREHQSLLFISWAHIWEPSRMI*PSLAML
Trigger: CAACATTGCCAAGCTGGGCCAGATCATTCGTGAGGG...TTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp TCAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGTATCAGCTCAGAGATaGAGGAGTGGCAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: SKPEGTSVTSVYKLGTHLVSAQR*RSGRRR
Trigger: CCTCCTCCTGCCACTCCTCCATCTCTGAGCTGATAC...CAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224721.12
ENST00000398788.4
CDS-3UTR CCA 90 bp AACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAAAATGTAGCGAGACTTaGACTGGAGTCGGGTGTCCG +
Preference number: 4 (lower is better)
Translates to: NRREHQSLLFISWAHIWEKCSET*TGVGCP
Trigger: CGGACACCCGACTCCAGTCCAAGTCTCGCTACATTT...TTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp TCAAAACCATCTGCCTCTAAACAGGTGGGAATTCTCAACAGGTCCCCAAGGAAGCTGCCTCTAAACAGGTaGGAATTCTCAACAGGTCCC +
Preference number: 4 (lower is better)
Translates to: SKPSASKQVGILNRSPRKLPLNR*EFSTGP
Trigger: GGGACCTGTTGAGAATTCCCACCTGTTTAGAGGCAG...CTTCCTTGGGGACCTGTTGAGAATTCCCACCTGTTTAGAGGCAGATGGTTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp CTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCATCTGGGCCTCCATAACTCGTTCCTaGCCACAGAGCAAGTTATTG +
Preference number: 4 (lower is better)
Translates to: LLDERLLVKRCALVVIWASITRS*PQSKLL
Trigger: CAATAACTTGCTCTGTGGCCAGGAACGAGTTATGGA...GGCCCAGATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CTGCGGCCTCTTACCATCCATAACTCGTTCCTGGCCACAGAGCAAGTTATTGACTCCATAACTCGTTCCTaGCCACAGAGCAAGTTATTG +
Preference number: 4 (lower is better)
Translates to: LRPLTIHNSFLATEQVIDSITRS*PQSKLL
Trigger: CAATAACTTGCTCTGTGGCCAGGAACGAGTTATGGA...GTCAATAACTTGCTCTGTGGCCAGGAACGAGTTATGGATGGTAAGAGGCCGCAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp TGTGTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTAAGGTCAGCACTCCGCTaGTGTAGTCCAGGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: CVAHIYHLDLLSIQSLVLRSALR*CSPGQR
Trigger: TCTTTGCCCTGGACTACATCAGCGGAGTGCTGACCT...TAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646131.1
CDS-3UTR TCA 90 bp GACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAACCTTCACAGTCAGGATaGAGCCATGGCTGTACAGGG +
Preference number: 4 (lower is better)
Translates to: DYRYLTPHLAISRTFYDKPSQSG*SHGCTG
Trigger: CCCTGTACAGCCATGGCTTCATCCTGACTGTGAAGG...TTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp GTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTAGAACCTTCACAGTCAGGATaGAGCCATGGCTGTACAGGG +
Preference number: 4 (lower is better)
Translates to: VAHIYHLDLLSIQSLVLEPSQSG*SHGCTG
Trigger: CCCTGTACAGCCATGGCTTCATCCTGACTGTGAAGG...TTCTAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646131.1
CDS-3UTR TCA 90 bp GTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTAGAATGTCCACCACCTGGATaGAGAGTGGAAGGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: VAHIYHLDLLSIQSLVLECPPPG*RVEGQS
Trigger: GCTTTGCCCTTCCACTCTTCATCCAGGTGGTGGACA...TTCTAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS-3UTR TCA 90 bp GTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTAGAATGTACAGTGGCTGGCTaGAGATGGGCCGGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: VAHIYHLDLLSIQSLVLECTVAG*RWAGCH
Trigger: ATGACAACCGGCCCATCTTCAGCCAGCCACTGTACA...TTCTAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS-3UTR TCA 90 bp GTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTAGAACGTTCTCGTACAGGCTaGTGTTGTACAGTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: VAHIYHLDLLSIQSLVLERSRTG*CCTVAG
Trigger: GCCAGCCACTGTACAACATCAGCCTGTACGAGAACG...TTCTAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS-3UTR TCA 90 bp TGTGTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTACGTTCTCGTACAGGCTaGTGTTGTACAGTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: CVAHIYHLDLLSIQSLVLRSRTG*CCTVAG
Trigger: GCCAGCCACTGTACAACATCAGCCTGTACGAGAACG...TAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS-3UTR TCA 90 bp GACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAAGCCCTCGTACAGGCTaGTGTCGAAGTAGCTGCCAA +
Preference number: 4 (lower is better)
Translates to: DYRYLTPHLAISRTFYDKSPRTG*CRSSCQ
Trigger: TTGGCAGCTACTTCGACATCAGCCTGTACGAGGGCT...TTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp TACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAGAGTGCCCGTGGTGCTGTTaGGGCTGTAGAACTTGTTGG +
Preference number: 4 (lower is better)
Translates to: YRYLTPHLAISRTFYDKECPWCC*GCRTCW
Trigger: CCAACAAGTTCTACAGCCTCAACAGCACCACGGGCA...CTCTTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp TACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAGAGGATGGCAGCCTCGTATaGGGCATTGGAGAACTGCAC +
Preference number: 4 (lower is better)
Translates to: YRYLTPHLAISRTFYDKEDGSLV*GIGELH
Trigger: GTGCAGTTCTCCAATGCCTCATACGAGGCTGCCATC...CTCTTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp TCAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGCATACACGCTTGTGCTaGACTGGGGCTTGGAGAACT +
Preference number: 4 (lower is better)
Translates to: SKPEGTSVTSVYKLGTHLHTRLC*TGAWRT
Trigger: AGTTCTCCAAGCCCCAGTTCAGCACAAGCGTGTATG...CAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp AAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAGTGCAAAGAGCTTTTTaGGCCGCAGGTAATCCTCCA +
Preference number: 4 (lower is better)
Translates to: KPEGTSVTSVYKLGTHLGVQRAF*AAGNPP
Trigger: TGGAGGATTACCTGCGGCTCAAAAAGCTCTTTGCAC...TCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224721.12
ENST00000398788.4
CDS-3UTR TCA 90 bp AACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGTAGAGGTCAGATGCTaGATGAGCGTCTGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: NRREHQSLLFISWAHIWEVEVRC*MSVWQK
Trigger: CTTTTGCCAGACGCTCATTCAGCATCTGACCTCTAC...TTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp ATTGATTTGAAAATGCGGACAGGCCACCGCCCTCTTGTCTGCATGGCAGATGGGATGATTCATGAGGATTaGTTTGAAAATGCGGACAGG +
Preference number: 4 (lower is better)
Translates to: IDLKMRTGHRPLVCMADGMIHED*FENADR
Trigger: CCTGTCCGCATTTTCAAATCAATCCTCATGAATCAT...CCCATCTGCCATGCAGACAAGAGGGCGGTGGCCTGTCCGCATTTTCAAATCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp AAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTAGTCCAGGGCAAAGATaGTGTTGGTATTCCCTGAAA +
Preference number: 4 (lower is better)
Translates to: KQLGLQVPNTTLGHLKDISPGQR*CWYSLK
Trigger: TTTCAGGGAATACCAACAGCATCTTTGCCCTGGACT...AATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp TGGGAATTCTCAACAGGTCCCCAAGGAAGGATGAGGCCACATTCCTCCAAGTCAAGTACACCTCAAACATaGTGTTCAGGCCCAAATTCT +
Preference number: 4 (lower is better)
Translates to: WEFSTGPQGRMRPHSSKSSTPQT*CSGPNS
Trigger: AGAATTTGGGCCTGAACAGCATGTTTGAGGTGTACT...TGACTTGGAGGAATGTGGCCTCATCCTTCCTTGGGGACCTGTTGAGAATTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR GCA 90 bp TCCAGGTGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTTAGTACACCTCAAACATaGTGTTCAGGCCCAAATTCT +
Preference number: 4 (lower is better)
Translates to: SRCQSPAWRSCQMAKVPFSTPQT*CSGPNS
Trigger: AGAATTTGGGCCTGAACAGCATGTTTGAGGTGTACT...AAAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCACCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp AAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGATGTTTACGGTGGCGATaGCAGTTTTCTGGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: KPEGTSVTSVYKLGTHLGCLRWR*QFSGCG
Trigger: GCCACAACCAGAAAACTGGCATCGCCACCGTAAACA...TCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp GACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAACAAACACTGTGGCACTaGTGGTGGCTTTCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: DYRYLTPHLAISRTFYDKQTLWH*WWLSEG
Trigger: CCCCTCTGAAAGCCACCAGCAGTGCCACAGTGTTTG...TTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp TACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAGAGCAAACACTGTGGCACTaGTGGTGGCTTTCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: YRYLTPHLAISRTFYDKEQTLWH*WWLSEG
Trigger: CCCCTCTGAAAGCCACCAGCAGTGCCACAGTGTTTG...CTCTTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp AGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGGATCCGGAAGTTGTTaGCATGGTTACCATGGAGGA +
Preference number: 4 (lower is better)
Translates to: SWDYRYLTPHLAISRTFYGSGSC*HGYHGG
Trigger: TCCTCCATGGTAACCATGGCAACAACTTCCGGATCC...ATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp TCAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGTTGACGATGTTGCCTaGGACGATGGCATAGGTGAC +
Preference number: 4 (lower is better)
Translates to: SKPEGTSVTSVYKLGTHLVDDVA*DDGIGD
Trigger: GTCACCTATGCCATCGTCGCAGGCAACATCGTCAAC...CAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp AGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGCCAGTACTTGGATCACCACCTaGACTGAATTTTCGCGACGG +
Preference number: 4 (lower is better)
Translates to: REHQSLLFISWAHIWEASTWITT*TEFSRR
Trigger: CCGTCGCGAAAATTCAGTGCAGGTGGTGATCCAAGT...ACTGGCTTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp TGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCACCTGGACAAAAGATTCCGTAGCTaGTCCTTGTTCTCATCGATC +
Preference number: 4 (lower is better)
Translates to: CSLTLTFLSTWGCHLHLDKRFRS*SLFSSI
Trigger: GATCGATGAGAACAAGGAGCAGCTACGGAATCTTTT...GTCCAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp AACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAATTGCACCATCCGCTGTaGAAAGAGCTTTTTGAGCCG +
Preference number: 4 (lower is better)
Translates to: NRREHQSLLFISWAHIWELHHPL*KELFEP
Trigger: CGGCTCAAAAAGCTCTTTGCACAGCGGATGGTGCAA...TTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224721.12
ENST00000398788.4
CDS-3UTR GCA 90 bp CGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCATCTAGCCCTTTCTTCTTGTaGCTGTTTACTTCCCAAGAG +
Preference number: 4 (lower is better)
Translates to: RCCLMKDFWSRDVHSWSSSPFFL*LFTSQE
Trigger: CTCTTGGGAAGTAAACAGGCACAAGAAGAAAGGGCT...AGATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp TGTCTTAGAATAGAAGCCCCTTCCCCATTCTCAGACGGTGTAATTCAGGCGGGGTCTACCACTTGGATCTaGTTAGCATTCAATCCCTTG +
Preference number: 4 (lower is better)
Translates to: CLRIEAPSPFSDGVIQAGSTTWI*LAFNPL
Trigger: CAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGA...CCCCGCCTGAATTACACCGTCTGAGAATGGGGAAGGGGCTTCTATTCTAAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS-3UTR CCA 90 bp GTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTAGAAGGGTGGACAGAGGCCTaGTCTTGTCTTGATCTGTGG +
Preference number: 4 (lower is better)
Translates to: VAHIYHLDLLSIQSLVLEGWTEA*SCLDLW
Trigger: CCACAGATCAAGACAAGACCAGGCCTCTGTCCACCC...TTCTAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646131.1
CDS-3UTR CCA 90 bp CAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTAATGGGGTCCATGTCCTaGACATCTGTGATGATGATG +
Preference number: 4 (lower is better)
Translates to: QLGLQVPNTTLGHLKDILMGSMS*TSVMMM
Trigger: CATCATCATCACAGATGTCCAGGACATGGACCCCAT...TAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp TGTGTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTAGTCAGGATGAAGCCATaGCTGTACAGGGGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: CVAHIYHLDLLSIQSLVLVRMKP*LYRGFS
Trigger: GGAGAACCCCCTGTACAGCCATGGCTTCATCCTGAC...TAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646131.1
CDS-3UTR CCA 90 bp TGTGTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTAGACTGTAGCGTCAGATaGGGTGCGGTCATCGTTCAG +
Preference number: 4 (lower is better)
Translates to: CVAHIYHLDLLSIQSLVLDCSVR*GAVIVQ
Trigger: CTGAACGATGACCGCACCCCATCTGACGCTACAGTC...TAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646131.1
CDS-3UTR CCA 90 bp GTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTAGAACACCTGGATGAAGAGTaGAAGGGCAAAGCCGACCTG +
Preference number: 4 (lower is better)
Translates to: VAHIYHLDLLSIQSLVLEHLDEE*KGKADL
Trigger: CAGGTCGGCTTTGCCCTTCCACTCTTCATCCAGGTG...TTCTAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS-3UTR CCA 90 bp CAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAGATGATGAAGTGGTaGGAGTTGTTCCCCACCAAG +
Preference number: 4 (lower is better)
Translates to: QNRREHQSLLFISWAHIWEMMKW*ELFPTK
Trigger: CTTGGTGGGGAACAACTCCCACCACTTCATCATCTC...CCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp TACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAGAGGGGGAGATGATGAAGTaGTGGGAGTTGTTCCCCACC +
Preference number: 4 (lower is better)
Translates to: YRYLTPHLAISRTFYDKEGEMMK*WELFPT
Trigger: GGTGGGGAACAACTCCCACCACTTCATCATCTCCCC...CTCTTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp GACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAGGGGAGATGATGAAGTaGTGGGAGTTGTTCCCCACC +
Preference number: 4 (lower is better)
Translates to: DYRYLTPHLAISRTFYDKGEMMK*WELFPT
Trigger: GGTGGGGAACAACTCCCACCACTTCATCATCTCCCC...TTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp GTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTAGAAGGGGAGATGATGAAGTaGTGGGAGTTGTTCCCCACC +
Preference number: 4 (lower is better)
Translates to: VAHIYHLDLLSIQSLVLEGEMMK*WELFPT
Trigger: GGTGGGGAACAACTCCCACCACTTCATCATCTCCCC...TTCTAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS-3UTR CCA 90 bp TGTGTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTAGCTGATGTTGTACAGTaGCTGGCTGAAGATGGGCCG +
Preference number: 4 (lower is better)
Translates to: CVAHIYHLDLLSIQSLVLADVVQ*LAEDGP
Trigger: CGGCCCATCTTCAGCCAGCCACTGTACAACATCAGC...TAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS-3UTR CCA 90 bp GTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTAGAAGCTGATGTTGTACAGTaGCTGGCTGAAGATGGGCCG +
Preference number: 4 (lower is better)
Translates to: VAHIYHLDLLSIQSLVLEADVVQ*LAEDGP
Trigger: CGGCCCATCTTCAGCCAGCCACTGTACAACATCAGC...TTCTAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS-3UTR CCA 90 bp AAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTCATGTAGCTGGTCTTaGTCTCGTAGTCCAGGTAAT +
Preference number: 4 (lower is better)
Translates to: KQLGLQVPNTTLGHLKDISCSWS*SRSPGN
Trigger: ATTACCTGGACTACGAGACCAAGACCAGCTACATGA...AATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp AGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTCATGTAGCTGGTCTTaGTCTCGTAGTCCAGGTAAT +
Preference number: 4 (lower is better)
Translates to: SSWDYRYLTPHLAISRTFSCSWS*SRSPGN
Trigger: ATTACCTGGACTACGAGACCAAGACCAGCTACATGA...AAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp GAATGCTTGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCAAAGCGGTACGTGATTTaGTTGAGGTTGTCGATGGAG +
Preference number: 4 (lower is better)
Translates to: ECLFIDIDFLVHVGMPPPKRYVI*LRLSME
Trigger: CTCCATCGACAACCTCAACCAAATCACGTACCGCTT...TGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACAAGCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp AGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGCCAGTGCTCTGGTAGGTCGCTaGCATTGTCAATCACTGAGA +
Preference number: 4 (lower is better)
Translates to: REHQSLLFISWAHIWEASALVGR*HCQSLR
Trigger: TCTCAGTGATTGACAATGCCAGCGACCTACCAGAGC...ACTGGCTTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp AGATCTTATGAAGGTAGAGGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGACCAAAGGGCTTGAACTaGGGCGTATTGTCATTGACG +
Preference number: 4 (lower is better)
Translates to: RSYEGRGQMLNERLAKVGPKGLN*GVLSLT
Trigger: CGTCAATGACAATACGCCCCAGTTCAAGCCCTTTGG...TCCCACTTTTGCCAGACGCTCATTCAGCATCTGACCTCTACCTTCATAAGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp AGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGCCAGTGATGAGGCCGCTGATTaGGTCGATGATGAAGAACTC +
Preference number: 4 (lower is better)
Translates to: REHQSLLFISWAHIWEASDEAAD*VDDEEL
Trigger: GAGTTCTTCATCATCGACCCAATCAGCGGCCTCATC...ACTGGCTTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp AAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGACCATCGGGCTGCAGATaGAAGTTCTTCTCTTCGTTG +
Preference number: 4 (lower is better)
Translates to: KPEGTSVTSVYKLGTHLGPSGCR*KFFSSL
Trigger: CAACGAAGAGAAGAACTTCCATCTGCAGCCCGATGG...TCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp TCAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGCCAGCCACACAGGGTTaGCTCCATCAAAGGAGTACT +
Preference number: 4 (lower is better)
Translates to: SKPEGTSVTSVYKLGTHLPATQG*LHQRST
Trigger: AGTACTCCTTTGATGGAGCCAACCCTGTGTGGCTGG...CAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp TCAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGCAGCAGAGAGGGATGTaGCGGAAATGTAGCGAGACT +
Preference number: 4 (lower is better)
Translates to: SKPEGTSVTSVYKLGTHLQQRGM*RKCSET
Trigger: AGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTG...CAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp AGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGCCAGTAGCTGGGCACACATTTaGGAAGCCAGTGAAATGGAG +
Preference number: 4 (lower is better)
Translates to: REHQSLLFISWAHIWEASSWAHI*EASEME
Trigger: CTCCATTTCACTGGCTTCCCAAATGTGTGCCCAGCT...ACTGGCTTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp AGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATAGCCTCTCAAGCAGCTaGGACTACAGGTACCTAACA +
Preference number: 4 (lower is better)
Translates to: SWDYRYLTPHLAISRTFYSLSSS*DYRYLT
Trigger: TGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCT...ATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp TACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAGAGCAGAGAACTCCACGGTaGACTCTGACTTGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: YRYLTPHLAISRTFYDKEQRTPR*TLTWSL
Trigger: GAGAGACCAAGTCAGAGTTCACCGTGGAGTTCTCTG...CTCTTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp GACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAACAGAGAACTCCACGGTaGACTCTGACTTGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: DYRYLTPHLAISRTFYDKQRTPR*TLTWSL
Trigger: GAGAGACCAAGTCAGAGTTCACCGTGGAGTTCTCTG...TTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp TACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAGAGTGTACTCGGAGCTGTTaGACTCCGGGGCATTGTCAT +
Preference number: 4 (lower is better)
Translates to: YRYLTPHLAISRTFYDKECTRSC*TPGHCH
Trigger: ATGACAATGCCCCGGAGTTCAACAGCTCCGAGTACA...CTCTTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp GTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTAGAATGTACTCGGAGCTGTTaGACTCCGGGGCATTGTCAT +
Preference number: 4 (lower is better)
Translates to: VAHIYHLDLLSIQSLVLECTRSC*TPGHCH
Trigger: ATGACAATGCCCCGGAGTTCAACAGCTCCGAGTACA...TTCTAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646131.1
CDS-3UTR TCA 90 bp TACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAGAGTCATCTCCACCAGGTTaGTGTAGTAGGGTGCGTCCT +
Preference number: 4 (lower is better)
Translates to: YRYLTPHLAISRTFYDKESSPPG*CSRVRP
Trigger: AGGACGCACCCTACTACATCAACCTGGTGGAGATGA...CTCTTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp AGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATACAAAAGGCAGGTTCTaGAAGGTGGGGTCATTGTCA +
Preference number: 4 (lower is better)
Translates to: SWDYRYLTPHLAISRTFYTKGRF*KVGSLS
Trigger: TGACAATGACCCCACCTTTCAGAACCTGCCTTTTGT...ATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR TCA 90 bp AAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGACGTTCTCATTCACACTaGCATTGTATCCAAAGGGGC +
Preference number: 4 (lower is better)
Translates to: KPEGTSVTSVYKLGTHLGRSHSH*HCIQRG
Trigger: GCCCCTTTGGATACAATGTCAGTGTGAATGAGAACG...TCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp CAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGGCATTGTCAATCACTaGGAGAGTGACCTCATAGGT +
Preference number: 4 (lower is better)
Translates to: QNRREHQSLLFISWAHIWGIVNH*ESDLIG
Trigger: ACCTATGAGGTCACTCTCTCAGTGATTGACAATGCC...CCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp AAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGATGGGGTTGTTGTCATTaGTGTCCACGATTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: KPEGTSVTSVYKLGTHLGWGCCH*CPRFPG
Trigger: ACCTGGAAATCGTGGACATCAATGACAACAACCCCA...TCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp AACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAATGGGGTTGTTGTCATTaGTGTCCACGATTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: NRREHQSLLFISWAHIWEWGCCH*CPRFPG
Trigger: ACCTGGAAATCGTGGACATCAATGACAACAACCCCA...TTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp CAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGCAAGGCTGTACTCAATaGGTGCAAAGTTGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: QNRREHQSLLFISWAHIWQGCTQ*VQSCLS
Trigger: ACTCAGGCAACTTTGCACTCATTGAGTACAGCCTTG...CCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp TGTGTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTACAATTGGTTCCAGGATaGCACAACCAACTGGGCCGA +
Preference number: 4 (lower is better)
Translates to: CVAHIYHLDLLSIQSLVLQLVPG*HNQLGR
Trigger: TCGGCCCAGTTGGTTGTGTCATCCTGGAACCAATTG...TAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS-3UTR TCA 90 bp GTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTAGAAGACTGGGCAAGACTCTaGGCTTGTGTAGCACACATC +
Preference number: 4 (lower is better)
Translates to: VAHIYHLDLLSIQSLVLEDWARL*ACVAHI
Trigger: GATGTGTGCTACACAAGCTCAGAGTCTTGCCCAGTC...TTCTAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS-3UTR TCA 90 bp TGTGTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTACTCCGTGACATTTATTaGGCACCGACTGGGCAAGAC +
Preference number: 4 (lower is better)
Translates to: CVAHIYHLDLLSIQSLVLLRDIY*APTGQD
Trigger: GTCTTGCCCAGTCGGTGCTCAATAAATGTCACGGAG...TAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS-3UTR TCA 90 bp GTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTAGAACTCCGTGACATTTATTaGGCACCGACTGGGCAAGAC +
Preference number: 4 (lower is better)
Translates to: VAHIYHLDLLSIQSLVLELRDIY*APTGQD
Trigger: GTCTTGCCCAGTCGGTGCTCAATAAATGTCACGGAG...TTCTAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS-3UTR GCA 90 bp TGTGTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTAGTGTATTCTCAGGGATaGGGACGCTGTAGGGCTGAT +
Preference number: 4 (lower is better)
Translates to: CVAHIYHLDLLSIQSLVLVYSQG*GRCRAD
Trigger: ATCAGCCCTACAGCGTCCGCATCCCTGAGAATACAC...TAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646131.1
CDS-3UTR GCA 90 bp TACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAGAGTCCGTGGCTTTCAGCTaGAAGATGCTGTGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: YRYLTPHLAISRTFYDKESVAFS*KMLWPS
Trigger: TGAAGGCCACAGCATCTTGCAGCTGAAAGCCACGGA...CTCTTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616684.4
CDS-3UTR GCA 90 bp AGATCTTATGAAGGTAGAGGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGAAGTGGATGGCCAGAATaGTGTAGAAGACAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: RSYEGRGQMLNERLAKVGSGWPE*CRRQGC
Trigger: ACAGCCTTGTCTTCTACAGCATTCTGGCCATCCACT...TCCCACTTTTGCCAGACGCTCATTCAGCATCTGACCTCTACCTTCATAAGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp AGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGTATCAAAGAAGTaGTTGGTGAAGAAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: SSWDYRYLTPHLAISRTFYVSKK*LVKKGS
Trigger: GCTGCCCTTCTTCACCAACCACTTCTTTGATACATA...AAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp AGATCTTATGAAGGTAGAGGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGAATGGGGTCCATGTCCTaGACATCTGTGATGATGATG +
Preference number: 4 (lower is better)
Translates to: RSYEGRGQMLNERLAKVGMGSMS*TSVMMM
Trigger: CATCATCATCACAGATGTCCAGGACATGGACCCCAT...TCCCACTTTTGCCAGACGCTCATTCAGCATCTGACCTCTACCTTCATAAGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp TGTGTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTATCCTTGTCCACCACCTaGATGAAGAGTGGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: CVAHIYHLDLLSIQSLVLSLSTT*MKSGRA
Trigger: TGCCCTTCCACTCTTCATCCAGGTGGTGGACAAGGA...TAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS-3UTR CCA 90 bp GTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTAGAATCCTTGTCCACCACCTaGATGAAGAGTGGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: VAHIYHLDLLSIQSLVLESLSTT*MKSGRA
Trigger: TGCCCTTCCACTCTTCATCCAGGTGGTGGACAAGGA...TTCTAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS-3UTR CCA 90 bp GTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTAGAACGTAGTCCAGTGGGATaGCCACCCGAATACGAATGT +
Preference number: 4 (lower is better)
Translates to: VAHIYHLDLLSIQSLVLERSPVG*PPEYEC
Trigger: ACATTCGTATTCGGGTGGCCATCCCACTGGACTACG...TTCTAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS-3UTR CCA 90 bp GACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAACGTAGTCCAGTGGGATaGCCACCCGAATACGAATGT +
Preference number: 4 (lower is better)
Translates to: DYRYLTPHLAISRTFYDKRSPVG*PPEYEC
Trigger: ACATTCGTATTCGGGTGGCCATCCCACTGGACTACG...TTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp GTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTAGAAATGTTGTACAGTGGCTaGCTGAAGATGGGCCGGTTG +
Preference number: 4 (lower is better)
Translates to: VAHIYHLDLLSIQSLVLEMLYSG*LKMGRL
Trigger: CAACCGGCCCATCTTCAGCCAGCCACTGTACAACAT...TTCTAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS-3UTR CCA 90 bp TACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAGAGATGTTGTACAGTGGCTaGCTGAAGATGGGCCGGTTG +
Preference number: 4 (lower is better)
Translates to: YRYLTPHLAISRTFYDKEMLYSG*LKMGRL
Trigger: CAACCGGCCCATCTTCAGCCAGCCACTGTACAACAT...CTCTTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp AGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGCCAGTGGATGTATTCAGACTTaGTCTCTCGGTCAAGCAGAG +
Preference number: 4 (lower is better)
Translates to: REHQSLLFISWAHIWEASGCIQT*SLGQAE
Trigger: CTCTGCTTGACCGAGAGACCAAGTCTGAATACATCC...ACTGGCTTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAATTCACATCCAGCACATaGATGGTGAGCGTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: DYRYLTPHLAISRTFYDKFTSST*MVSVLV
Trigger: CACCAGCACGCTCACCATCCATGTGCTGGATGTGAA...TTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp AGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATTGCTCTGCAGAAAGATaGGCCGGTTGTCATTCACAT +
Preference number: 4 (lower is better)
Translates to: SWDYRYLTPHLAISRTFYCSAER*AGCHSH
Trigger: ATGTGAATGACAACCGGCCCATCTTTCTGCAGAGCA...ATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp CAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTACATTCATCATGTAGCTaGTCTTGGTCTCGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: QLGLQVPNTTLGHLKDILHSSCS*SWSRSP
Trigger: TGGACTACGAGACCAAGACCAGCTACATGATGAATG...TAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp GACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAACCAGATTCTCCAGGATaGCAGCCTCGTATGAGGCAT +
Preference number: 4 (lower is better)
Translates to: DYRYLTPHLAISRTFYDKPDSPG*QPRMRH
Trigger: ATGCCTCATACGAGGCTGCCATCCTGGAGAATCTGG...TTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp AGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGCCAGTTTGACATCCAGCACTTaGATCACCACCTGCACTGAA +
Preference number: 4 (lower is better)
Translates to: REHQSLLFISWAHIWEASLTSST*ITTCTE
Trigger: TTCAGTGCAGGTGGTGATCCAAGTGCTGGATGTCAA...ACTGGCTTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp GACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAATTAGATTGGAAGAAATaGTGCTCCCTGCCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: DYRYLTPHLAISRTFYDKLDWKK*CSLPPA
Trigger: GGCTGGGGGCAGGGAGCACCATTTCTTCCAATCTAA...TTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp CATAACTCGTTCCTGGCCACAGAGCAAGTTATTGACAGAGTTGGTCTTAAGTTTCCAAGCAGGCTCTATTaGAGAAGCCCACTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: HNSFLATEQVIDRVGLKFPSRLY*RSPLSL
Trigger: AAGGGACAGTGGGCTTCTCCAATAGAGCCTGCTTGG...AAACTTAAGACCAACTCTGTCAATAACTTGCTCTGTGGCCAGGAACGAGTTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CAA 72 bp TCAAGCAGCTGGGACTACAGGTACCTAACACCACACTaGGCCATCTCAAGGACATTTTATGACAAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: SSSWDYRYLTPH*AISRTFYDKEE
Trigger: CTCCTCTTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp CATAACTCGTTCCTGGCCACAGAGCAAGTTATTGACAGAGTTGGTCTTAAGTTTTTCCCCAAAGGTGCCTaGATCATTGTCAGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: HNSFLATEQVIDRVGLKFFPKGA*IIVSCQ
Trigger: CTGGCAACTGACAATGATGCAGGCACCTTTGGGGAA...AAACTTAAGACCAACTCTGTCAATAACTTGCTCTGTGGCCAGGAACGAGTTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp GACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAATTCCCCAAAGGTGCCTaGATCATTGTCAGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: DYRYLTPHLAISRTFYDKFPKGA*IIVSCQ
Trigger: CTGGCAACTGACAATGATGCAGGCACCTTTGGGGAA...TTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp GACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAGCTGCCAAAGGCAGATaGACTGACAATGCTGTAGGT +
Preference number: 4 (lower is better)
Translates to: DYRYLTPHLAISRTFYDKAAKGR*TDNAVG
Trigger: ACCTACAGCATTGTCAGTGCATCTGCCTTTGGCAGC...TTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp CATAACTCGTTCCTGGCCACAGAGCAAGTTATTGACAGAGTTGGTCTTAAGTTTTGTTTACGGTGGCGATaGCAGTTTTCTGGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: HNSFLATEQVIDRVGLKFCLRWR*QFSGCG
Trigger: GCCACAACCAGAAAACTGGCATCGCCACCGTAAACA...AAACTTAAGACCAACTCTGTCAATAACTTGCTCTGTGGCCAGGAACGAGTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp TACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAGAGAATCTCAGTACCCAGTaGCAGATTCTCCAGGATGGC +
Preference number: 4 (lower is better)
Translates to: YRYLTPHLAISRTFYDKENLSTQ*QILQDG
Trigger: GCCATCCTGGAGAATCTGGCACTGGGTACTGAGATT...CTCTTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp TGTCTTAGAATAGAAGCCCCTTCCCCATTCTCAGACGGTGTAATTCAGGCGGGGATCTGCTGGAATTACTaGAAAAGAACTTTTCCCACA +
Preference number: 4 (lower is better)
Translates to: CLRIEAPSPFSDGVIQAGICWNY*KRTFPT
Trigger: TGTGGGAAAAGTTCTTTTGCAGTAATTCCAGCAGAT...CCCCGCCTGAATTACACCGTCTGAGAATGGGGAAGGGGCTTCTATTCTAAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS-3UTR CCA 90 bp CAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATATGTATCAAAGAAGTaGTTGGTGAAGAAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: QLGLQVPNTTLGHLKDILYVSKK*LVKKGS
Trigger: GCTGCCCTTCTTCACCAACCACTTCTTTGATACATA...TAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp TGTGTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTAGAGATGATGAAGTGGTaGGAGTTGTTCCCCACCAAG +
Preference number: 4 (lower is better)
Translates to: CVAHIYHLDLLSIQSLVLEMMKW*ELFPTK
Trigger: CTTGGTGGGGAACAACTCCCACCACTTCATCATCTC...TAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS-3UTR CCA 90 bp CATAACTCGTTCCTGGCCACAGAGCAAGTTATTGACAGAGTTGGTCTTAAGTTTGTAGAACTTGTTGGGTaGCTGGATGCTGTACACCAG +
Preference number: 4 (lower is better)
Translates to: HNSFLATEQVIDRVGLKFVELVG*LDAVHQ
Trigger: CTGGTGTACAGCATCCAGCCACCCAACAAGTTCTAC...AAACTTAAGACCAACTCTGTCAATAACTTGCTCTGTGGCCAGGAACGAGTTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGCATTCATCATGTAGCTaGTCTTGGTCTCGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: QNRREHQSLLFISWAHIWHSSCS*SWSRSP
Trigger: TGGACTACGAGACCAAGACCAGCTACATGATGAATG...CCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp CTCCATCACTGCTCAGCTGTGTGTACACTTAGACTTGTGATGTCTCTGGACCTTTTGATGAAAGACTTCTaGTCAAGAGATGTGCACTCG +
Preference number: 4 (lower is better)
Translates to: LHHCSAVCTLRLVMSLDLLMKDF*SRDVHS
Trigger: CGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAA...AAGGTCCAGAGACATCACAAGTCTAAGTGTACACACAGCTGAGCAGTGATGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp GTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTAGAAGATGACACAACCAACTaGGCCGATGAGAATCTGCTG +
Preference number: 4 (lower is better)
Translates to: VAHIYHLDLLSIQSLVLEDDTTN*ADENLL
Trigger: CAGCAGATTCTCATCGGCCCAGTTGGTTGTGTCATC...TTCTAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS-3UTR TCA 90 bp TACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAGAGACAAAAGGCAGGTTCTaGAAGGTGGGGTCATTGTCA +
Preference number: 4 (lower is better)
Translates to: YRYLTPHLAISRTFYDKETKGRF*KVGSLS
Trigger: TGACAATGACCCCACCTTTCAGAACCTGCCTTTTGT...CTCTTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp GTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTAGAAAGTACACCTCAAACATaGTGTTCAGGCCCTCATCCT +
Preference number: 4 (lower is better)
Translates to: VAHIYHLDLLSIQSLVLESTPQT*CSGPHP
Trigger: AGGATGAGGGCCTGAACAGCATGTTTGAGGTGTACT...TTCTAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470494.5
CDS-3UTR CCA 90 bp TCAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGCTGATTGTGAAATGTaGGCGCGTTGTCATTCACAT +
Preference number: 4 (lower is better)
Translates to: SKPEGTSVTSVYKLGTHLADCEM*ARCHSH
Trigger: ATGTGAATGACAACGCGCCCACATTTCACAATCAGC...CAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTAGAAATGGGGTCCATGTCCTaGACATCTGTGATGATGATG +
Preference number: 4 (lower is better)
Translates to: VAHIYHLDLLSIQSLVLEMGSMS*TSVMMM
Trigger: CATCATCATCACAGATGTCCAGGACATGGACCCCAT...TTCTAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646131.1
CDS-3UTR CCA 90 bp GACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAAAGCGGTACGTGATTTaGTTGAGGTTGTCGATGGAG +
Preference number: 4 (lower is better)
Translates to: DYRYLTPHLAISRTFYDKKRYVI*LRLSME
Trigger: CTCCATCGACAACCTCAACCAAATCACGTACCGCTT...TTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp AGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATCAATGTTGGTTAGATTaGAAGAAATGGTGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: SWDYRYLTPHLAISRTFYQCWLD*KKWCSL
Trigger: CAGGGAGCACCATTTCTTCCAATCTAACCAACATTG...ATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
3UTR CAA 72 bp TGGGAGCTGGCTCCAATTAATCTTTCTAGCCTCATCTaGATCCAAAACTCCAGGAAAACTGAAAGACCTGTC +
Preference number: 4 (lower is better)
Translates to: WELAPINLSSLI*IQNSRKTERPV
Trigger: GACAGGTCTTTCAGTTTTCCTGGAGTTTTGGATCAAGATGAGGCTAGAAAGATTAATTGGAGCCAGCTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp TGTGTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTAAGTCCAGGGCAAAGATaGTGTTGGTATTCCCTGAAA +
Preference number: 4 (lower is better)
Translates to: CVAHIYHLDLLSIQSLVLSPGQR*CWYSLK
Trigger: TTTCAGGGAATACCAACAGCATCTTTGCCCTGGACT...TAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646131.1
CDS-3UTR GCA 90 bp GTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTAGAAGGGCCGATGAGAATCTaGTGGAATTACTGCAAAAGA +
Preference number: 4 (lower is better)
Translates to: VAHIYHLDLLSIQSLVLEGPMRI*WNYCKR
Trigger: TCTTTTGCAGTAATTCCAGCAGATTCTCATCGGCCC...TTCTAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS-3UTR GCA 90 bp TGTGTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTAGGGCCGATGAGAATCTaGTGGAATTACTGCAAAAGA +
Preference number: 4 (lower is better)
Translates to: CVAHIYHLDLLSIQSLVLGPMRI*WNYCKR
Trigger: TCTTTTGCAGTAATTCCAGCAGATTCTCATCGGCCC...TAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS-3UTR CCA 90 bp GTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTAGAAGCTGATTGTGAAATGTaGGCGCGTTGTCATTCACAT +
Preference number: 4 (lower is better)
Translates to: VAHIYHLDLLSIQSLVLEADCEM*ARCHSH
Trigger: ATGTGAATGACAACGCGCCCACATTTCACAATCAGC...TTCTAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646131.1
CDS-3UTR CCA 90 bp CATAACTCGTTCCTGGCCACAGAGCAAGTTATTGACAGAGTTGGTCTTAAGTTTCAGGCACACTCTCATTaGCAAAGAGATCAAAGTCGT +
Preference number: 4 (lower is better)
Translates to: HNSFLATEQVIDRVGLKFQAHSH*QRDQSR
Trigger: ACGACTTTGATCTCTTTGCCAATGAGAGTGTGCCTG...AAACTTAAGACCAACTCTGTCAATAACTTGCTCTGTGGCCAGGAACGAGTTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp GTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTAGAACAGGCACACTCTCATTaGCAAAGAGATCAAAGTCGT +
Preference number: 4 (lower is better)
Translates to: VAHIYHLDLLSIQSLVLEQAHSH*QRDQSR
Trigger: ACGACTTTGATCTCTTTGCCAATGAGAGTGTGCCTG...TTCTAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS-3UTR CCA 90 bp GACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAACAGGCACACTCTCATTaGCAAAGAGATCAAAGTCGT +
Preference number: 4 (lower is better)
Translates to: DYRYLTPHLAISRTFYDKQAHSH*QRDQSR
Trigger: ACGACTTTGATCTCTTTGCCAATGAGAGTGTGCCTG...TTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp TGTGTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTACAGGCACACTCTCATTaGCAAAGAGATCAAAGTCGT +
Preference number: 4 (lower is better)
Translates to: CVAHIYHLDLLSIQSLVLQAHSH*QRDQSR
Trigger: ACGACTTTGATCTCTTTGCCAATGAGAGTGTGCCTG...TAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS-3UTR TCA 90 bp TACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAGAGCTCAAGGACATTTTATaGCAAAGAGGAGAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: YRYLTPHLAISRTFYDKELKDIL*QRGECC
Trigger: ACAGCACTCTCCTCTTTGTCATAAAATGTCCTTGAG...CTCTTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp TACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAGAGAGTACACCTCAAACATaGTGTTCAGGCCCAAATTCT +
Preference number: 4 (lower is better)
Translates to: YRYLTPHLAISRTFYDKESTPQT*CSGPNS
Trigger: AGAATTTGGGCCTGAACAGCATGTTTGAGGTGTACT...CTCTTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR GCA 90 bp GTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTAGAAAGTACACCTCAAACATaGTGTTCAGGCCCAAATTCT +
Preference number: 4 (lower is better)
Translates to: VAHIYHLDLLSIQSLVLESTPQT*CSGPNS
Trigger: AGAATTTGGGCCTGAACAGCATGTTTGAGGTGTACT...TTCTAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646131.1
CDS-3UTR GCA 90 bp CAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGTGAAATGGAGAGAATaGTTGTTCATTGACATTGAC +
Preference number: 4 (lower is better)
Translates to: QNRREHQSLLFISWAHIWVKWRE*LFIDID
Trigger: GTCAATGTCAATGAACAAGCATTCTCTCCATTTCAC...CCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp GTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTAGAATACCAGAATCACAATTaGTTCCAGGATGACACAACC +
Preference number: 4 (lower is better)
Translates to: VAHIYHLDLLSIQSLVLEYQNHN*FQDDTT
Trigger: GGTTGTGTCATCCTGGAACCAATTGTGATTCTGGTA...TTCTAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS-3UTR CCA 90 bp TGTGTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTATACCAGAATCACAATTaGTTCCAGGATGACACAACC +
Preference number: 4 (lower is better)
Translates to: CVAHIYHLDLLSIQSLVLYQNHN*FQDDTT
Trigger: GGTTGTGTCATCCTGGAACCAATTGTGATTCTGGTA...TAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS-3UTR CCA 90 bp AGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGATAAATCAGCCCATTaGATATCTGTTCATAATCCA +
Preference number: 4 (lower is better)
Translates to: SWDYRYLTPHLAISRTFYDKSAH*ISVHNP
Trigger: TGGATTATGAACAGATATCCAATGGGCTGATTTATC...ATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CCA 90 bp TGTGTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTACACACATCTACCACTTaGATCTGCTTAGCATTCAAT +
Preference number: 4 (lower is better)
Translates to: CVAHIYHLDLLSIQSLVLHTSTT*ICLAFN
Trigger: ATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTG...TAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTACACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS-3UTR GCA 90 bp TGTGTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTAATCTGCTGGAATTACTaGAAAAGAACTTTTCCCACA +
Preference number: 4 (lower is better)
Translates to: CVAHIYHLDLLSIQSLVLICWNY*KRTFPT
Trigger: TGTGGGAAAAGTTCTTTTGCAGTAATTCCAGCAGAT...TAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS-3UTR CCA 90 bp TACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAGAGGATAAATCAGCCCATTaGATATCTGTTCATAATCCA +
Preference number: 4 (lower is better)
Translates to: YRYLTPHLAISRTFYDKEDKSAH*ISVHNP
Trigger: TGGATTATGAACAGATATCCAATGGGCTGATTTATC...CTCTTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS GCA 90 bp TGTGCGTGTGTGCAGCGGCGCCGCGCCTCGCCTCGCCTCGGGCTCTaGTCTCCGCCGGATCGGCCCCCGCGGGCCGCCTGCTCTGGCCCT +
Preference number: 5 (lower is better)
Translates to: CACVQRRRASPRLGL*SPPDRPPRAACSGP
Trigger: AGGGCCAGAGCAGGCGGCCCGCGGGGGCCGATCCGGCGGAGAGCAGAGCCCGAGGCGAGGCGAGGCGCGGCGCCGCTGCACACACGCACA
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000461841.7
ENST00000616684.4
ENST00000644511.1
CDS CCA 90 bp CTTCCCGCCGGCGCGAAGGCTCATCCGCGGCGTGCCGGCAGCTCCTaGGTCTCCGCGGGCCGCTCGCCGCTCGCCGCTCGCCGCTCGCAA +
Preference number: 5 (lower is better)
Translates to: LPAGAKAHPRRAGSS*VSAGRSPLAARRSQ
Trigger: TTGCGAGCGGCGAGCGGCGAGCGGCGAGCGGCCCGCGGAGACCCAGGAGCTGCCGGCACGCCGCGGATGAGCCTTCGCGCCGGCGGGAAG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000461841.7
ENST00000616684.4
ENST00000644511.1
CDS CCA 90 bp CGGGCTCTGCTCTCCGCCGGATCGGCCCCCGCGGGCCGCCTGCTCTaGCCCTGGCCACCGCCGCGTCTTCCCGCCGGCGCGAAGGCTCAT +
Preference number: 5 (lower is better)
Translates to: RALLSAGSAPAGRLL*PWPPPRLPAGAKAH
Trigger: ATGAGCCTTCGCGCCGGCGGGAAGACGCGGCGGTGGCCAGGGCCAGAGCAGGCGGCCCGCGGGGGCCGATCCGGCGGAGAGCAGAGCCCG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000461841.7
ENST00000616684.4
ENST00000644511.1
CDS TCA 90 bp ACGTCCAGAGGCTCTGCCACCCCGCGCTCCATGCCCAGGCCGGGCTaGCTAGCCCCGACCACCTCAGCGTCCGGCCGCCGTCGGACGCGT +
Preference number: 5 (lower is better)
Translates to: TSRGSATPRSMPRPG*LAPTTSASGRRRTR
Trigger: ACGCGTCCGACGGCGGCCGGACGCTGAGGTGGTCGGGGCTAGTCAGCCCGGCCTGGGCATGGAGCGCGGGGTGGCAGAGCCTCTGGACGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000461841.7
ENST00000616684.4
ENST00000644511.1
CDS-3UTR CAA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGCGCGCTGGGCCTCCCTaGCGCCTGCTTAGCCGGAGG +
Preference number: 5 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWRAGPP*RLLSRR
Trigger: CCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCG...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp CCGGCCCACCGTCCCTCGACAGCCCCTGCCGGGCCCCGAGGACAACCGCAGCCAGTCGATGGCCACCACTaGGTAGATGGAGACCCCCGC +
Preference number: 5 (lower is better)
Translates to: PAHRPSTAPAGPRGQPQPVDGHH*VDGDPR
Trigger: GCGGGGGTCTCCATCTACCAAGTGGTGGCCATCGAC...TGGCTGCGGTTGTCCTCGGGGCCCGGCAGGGGCTGTCGAGGGACGGTGGGCCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp GACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGGGAGCCCCGTCTTGGCAGCCGTCTaGGTGGCCCCTCTTCAGGGC +
Preference number: 5 (lower is better)
Translates to: DPSRRRAHECMPHHPGSPVLAAV*VAPLQG
Trigger: GCCCTGAAGAGGGGCCACCAAGACGGCTGCCAAGAC...GGGGCTCCCAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp CAAGCCGGCCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCATCACTCCCGGGACCCTaGCAGAGGCAACTGACCCCC +
Preference number: 5 (lower is better)
Translates to: QAGRAGPEPPQGSRVHAPSLPGP*QRQLTP
Trigger: GGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGA...TGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGGCCGGCTTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS CCA 90 bp CGTGCGTGGTGGCCGACAGGGTTGGGGTGCCCTCGTCCTCCACAGTaGCCACCAGGTGGTAGAAGCTCTGGCGCTCGCGGTCAGGCGGGG +
Preference number: 5 (lower is better)
Translates to: RAWWPTGLGCPRPPQ*PPGGRSSGARGQAG
Trigger: CCCCGCCTGACCGCGAGCGCCAGAGCTTCTACCACCTGGTGGCCACTGTGGAGGACGAGGGCACCCCAACCCTGTCGGCCACCACGCACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp CCGGCCCACCGTCCCTCGACAGCCCCTGCCGGGCCCCGAGGACAACCGCAGCCATTGAGGCCCACGTCGTaGTCCGTGCAGTTCAGCCAG +
Preference number: 5 (lower is better)
Translates to: PAHRPSTAPAGPRGQPQPLRPTS*SVQFSQ
Trigger: CTGGCTGAACTGCACGGACAACGACGTGGGCCTCAA...TGGCTGCGGTTGTCCTCGGGGCCCGGCAGGGGCTGTCGAGGGACGGTGGGCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCGGGGCGGGGACCCGTaGTCTGAGGCCCTCACGGTA +
Preference number: 5 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSRGGDP*SEALTV
Trigger: TACCGTGAGGGCCTCAGACAACGGGTCCCCGCCCCG...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS CCA 90 bp CCCCATCGCTCACCGACAGGGTTGGGGTGCCCTCGTCCTCCACAGTaGCCACCAGGTGGTAGAAGCTCTGGCGCTCGCGGTCAGGCGGGG +
Preference number: 5 (lower is better)
Translates to: PHRSPTGLGCPRPPQ*PPGGRSSGARGQAG
Trigger: CCCCGCCTGACCGCGAGCGCCAGAGCTTCTACCACCTGGTGGCCACTGTGGAGGACGAGGGCACCCCAACCCTGTCGGTGAGCGATGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398792.3
CDS-3UTR CAA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACCGGGGCGGGGACCCGTaGTCTGAGGCCCTCACGGTA +
Preference number: 5 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHRGGDP*SEALTV
Trigger: TACCGTGAGGGCCTCAGACAACGGGTCCCCGCCCCG...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGAACTCTGAGCCCACCTaGGCGTCGGTGGCCACCCCT +
Preference number: 5 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWNSEPT*ASVATP
Trigger: AGGGGTGGCCACCGACGCCAAGGTGGGCTCAGAGTT...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp CCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGTCCTCGGGCAGGCTGTaGAGGTCGGTGGCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: PPLRLLSRRGWCLRGGAGSSGRL*RSVASS
Trigger: GCTGCTGGCCACCGACCTCAACAGCCTGCCCGAGGA...CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp CCGGCCCACCGTCCCTCGACAGCCCCTGCCGGGCCCCGAGGACAACCGCAGCCAATGAGTCCCGTGTCCTaGTCCAGCGAGAACCTGTCA +
Preference number: 5 (lower is better)
Translates to: PAHRPSTAPAGPRGQPQPMSPVS*SSENLS
Trigger: TGACAGGTTCTCGCTGGACAAGGACACGGGACTCAT...TGGCTGCGGTTGTCCTCGGGGCCCGGCAGGGGCTGTCGAGGGACGGTGGGCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp TGCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCCGGGGCGGGGACCCGTaGTCTGAGGCCCTCACGGTA +
Preference number: 5 (lower is better)
Translates to: CGVELGGRRACLASFSSARGGDP*SEALTV
Trigger: TACCGTGAGGGCCTCAGACAACGGGTCCCCGCCCCG...GGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGATGATGGCCGTGTCGTaGTGGCCTGCCAGGTCTCGG +
Preference number: 5 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWMMAVS*WPARSR
Trigger: CCGAGACCTGGCAGGCCACAACGACACGGCCATCAT...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGATCCCATCGGGCCCCTaGAGCTCCACTGGTGGCTTG +
Preference number: 5 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWIPSGP*SSTGGL
Trigger: CAAGCCACCAGTGGAGCTCAAGGGGCCCGATGGGAT...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTGATTCTGTGCGGGCGTaGCGCTCGAAGGCAGTGGCC +
Preference number: 5 (lower is better)
Translates to: WTGVGCPASRGCPRWASLDSVRA*RSKAVA
Trigger: GGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATC...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp CCGGCCCACCGTCCCTCGACAGCCCCTGCCGGGCCCCGAGGACAACCGCAGCCACAGAATCCCAAACCCTaGACCTCTCCTCACAACGCG +
Preference number: 5 (lower is better)
Translates to: PAHRPSTAPAGPRGQPQPQNPKP*TSPHNA
Trigger: CGCGTTGTGAGGAGAGGTCAAGGGTTTGGGATTCTG...TGGCTGCGGTTGTCCTCGGGGCCCGGCAGGGGCTGTCGAGGGACGGTGGGCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS GCA 90 bp GCTCCTCCCTGTGGCCACCCCCATCGCTCACCGACAGGGTTGGGGTaGCCTCGTCCTCCACAGTGGCCACCAGGTGGTAGAAGCTCTGGC +
Preference number: 5 (lower is better)
Translates to: APPCGHPHRSPTGLG*PRPPQWPPGGRSSG
Trigger: GCCAGAGCTTCTACCACCTGGTGGCCACTGTGGAGGACGAGGGCACCCCAACCCTGTCGGTGAGCGATGGGGGTGGCCACAGGGAGGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398792.3
CDS CCA 90 bp CACCCGCTCCTCCCTGTGGCCACCCCCATCGCTCACCGACAGGGTTaGGGTGCCCTCGTCCTCCACAGTGGCCACCAGGTGGTAGAAGCT +
Preference number: 5 (lower is better)
Translates to: HPLLPVATPIAHRQG*GALVLHSGHQVVEA
Trigger: AGCTTCTACCACCTGGTGGCCACTGTGGAGGACGAGGGCACCCCAACCCTGTCGGTGAGCGATGGGGGTGGCCACAGGGAGGAGCGGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398792.3
CDS CCA 90 bp CATTCTCACCCATCTTGTTCCCCTCACTCGGAGGCGGAGCTGCCCTaGCCCACCCGCTCCTCCCTGTGGCCACCCCCATCGCTCACCGAC +
Preference number: 5 (lower is better)
Translates to: HSHPSCSPHSEAELP*PTRSSLWPPPSLTD
Trigger: GTCGGTGAGCGATGGGGGTGGCCACAGGGAGGAGCGGGTGGGCCAGGGCAGCTCCGCCTCCGAGTGAGGGGAACAAGATGGGTGAGAATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398792.3
CDS-3UTR CAA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTACGGTGGAGTCCACCTaGGGGCCGCCGTCATCTGCC +
Preference number: 5 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPTVEST*GPPSSA
Trigger: GGCAGATGACGGCGGCCCCAAGGTGGACTCCACCGT...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp TTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGGGAGGCCAGGATGGGCCCATaGAGCACCGTGAGAGGGGTG +
Preference number: 5 (lower is better)
Translates to: LRLLSRRGWCLRGGAGREARMGP*STVRGV
Trigger: CACCCCTCTCACGGTGCTCAATGGGCCCATCCTGGC...CTCCCTCCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTAGGTGGGCCGTGCTGTaGAGCAGCCCGATGTCCTCA +
Preference number: 5 (lower is better)
Translates to: WTGVGCPASRGCPRWASLRWAVL*SSPMSS
Trigger: TGAGGACATCGGGCTGCTCAACAGCACGGCCCACCT...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCAGCCCATTAAGGCCCTaGTCAGGGTCCACGGCTGCC +
Preference number: 5 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSSPLRP*SGSTAA
Trigger: GGCAGCCGTGGACCCTGACAAGGGCCTTAATGGGCT...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTGTGCTGAACTGGGGCTaGGAGAACTGTGGCCGGCAG +
Preference number: 5 (lower is better)
Translates to: WTGVGCPASRGCPRWASLVLNWG*ENCGRQ
Trigger: CTGCCGGCCACAGTTCTCCAAGCCCCAGTTCAGCAC...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTACTGCGCCTGTCACGTaGCCCACGAGGGTGCCGCGT +
Preference number: 5 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPTAPVT*PTRVPR
Trigger: ACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAGT...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGGCAGTGTACTCAGCCTaGGTGAAGCGTGGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWAVYSA*VKRGGW
Trigger: CCAGCCACCACGCTTCACCAAGGCTGAGTACACTGC...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp CCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGCTCCACTGGTGGCTaGTGGCGGAAGCGCAGGCTA +
Preference number: 5 (lower is better)
Translates to: PPLRLLSRRGWCLRGGAGSSTGG*WRKRRL
Trigger: TAGCCTGCGCTTCCGCCACAAGCCACCAGTGGAGCT...CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTAGCTCCACTGGTGGCTaGTGGCGGAAGCGCAGGCTA +
Preference number: 5 (lower is better)
Translates to: WTGVGCPASRGCPRWASLSSTGG*WRKRRL
Trigger: TAGCCTGCGCTTCCGCCACAAGCCACCAGTGGAGCT...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp TTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGGGAGGATTCTGTGCGGGCGTaGCGCTCGAAGGCAGTGGCC +
Preference number: 5 (lower is better)
Translates to: LRLLSRRGWCLRGGAGREDSVRA*RSKAVA
Trigger: GGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATC...CTCCCTCCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCAGGGCCAAGCCAAGGTaGTCCCCAAGGCCTGGCCTT +
Preference number: 5 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSRAKPR*SPRPGL
Trigger: AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCT...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTGGGAGGAGGGCCTGTTaGGCCTCTTTCAGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: WTGVGCPASRGCPRWASLGRRAC*ASFSSA
Trigger: GGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCC...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp GGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTCCGGCCAGCCGCGCTGGGCCTCCCTaGCGCCTGCTTAGCCGGAGG +
Preference number: 5 (lower is better)
Translates to: GMWRKCSETWTGVGCPASRAGPP*RLLSRR
Trigger: CCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCG...GCTGGCCGGACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp CTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCCAGGCCACCGCCCTCTaGTCTGCATGGCAGATGGGC +
Preference number: 5 (lower is better)
Translates to: LSAPVTPGTLAEATDPLPQATAL*SAWQMG
Trigger: GCCCATCTGCCATGCAGACAAGAGGGCGGTGGCCTG...GGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp CAAGCCGGCCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCGTTCTCCTCATCCTaGTCCACCACCTGGATGAAG +
Preference number: 5 (lower is better)
Translates to: QAGRAGPEPPQGSRVHAPPFSSS*STTWMK
Trigger: CTTCATCCAGGTGGTGGACAAGGATGAGGAGAACGG...TGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGGCCGGCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466757.8
CDS TCA 90 bp GGTGCCTCACCACAGTCGGCCCTGGAGAGCTCAGTGGCCCTGCAGTaGAGCGGGGACTCACCAGGACTGTCAGCACAGAGGTCCCCACGG +
Preference number: 5 (lower is better)
Translates to: GASPQSALESSVALQ*SGDSPGLSAQRSPR
Trigger: CCGTGGGGACCTCTGTGCTGACAGTCCTGGTGAGTCCCCGCTTCACTGCAGGGCCACTGAGCTCTCCAGGGCCGACTGTGGTGAGGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461841.7
ENST00000643732.1
CDS-3UTR CAA 90 bp CAAGCCGGCCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCATCGTACAGGCTGATGTaGTACAGTGGCTGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: QAGRAGPEPPQGSRVHAPSYRLM*YSGWLK
Trigger: CTTCAGCCAGCCACTGTACAACATCAGCCTGTACGA...TGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGGCCGGCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp GAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCGTCGATGGCCACCACTaGGTAGATGGAGACCCCCGC +
Preference number: 5 (lower is better)
Translates to: EQLMRAARAKPRLSPRPGVDGHH*VDGDPR
Trigger: GCGGGGGTCTCCATCTACCAAGTGGTGGCCATCGAC...GCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTAAGGCCCCCGCGATGTaGCCAGAGGCCAGGGAGAAG +
Preference number: 5 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPKAPAM*PEAREK
Trigger: CTTCTCCCTGGCCTCTGGCAACATCGCGGGGGCCTT...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGAGCCCATTAAGGCCCTaGTCAGGGTCCACGGCTGCC +
Preference number: 5 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRSPLRP*SGSTAA
Trigger: GGCAGCCGTGGACCCTGACAAGGGCCTTAATGGGCT...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp GAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCGTGCTGAACTGGGGCTaGGAGAACTGTGGCCGGCAG +
Preference number: 5 (lower is better)
Translates to: EQLMRAARAKPRLSPRPGVLNWG*ENCGRQ
Trigger: CTGCCGGCCACAGTTCTCCAAGCCCCAGTTCAGCAC...GCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp TTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGGGAGGTGCTGAACTGGGGCTaGGAGAACTGTGGCCGGCAG +
Preference number: 5 (lower is better)
Translates to: LRLLSRRGWCLRGGAGREVLNWG*ENCGRQ
Trigger: CTGCCGGCCACAGTTCTCCAAGCCCCAGTTCAGCAC...CTCCCTCCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGACTGCGCCTGTCACGTaGCCCACGAGGGTGCCGCGT +
Preference number: 5 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQTAPVT*PTRVPR
Trigger: ACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAGT...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp TTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGGGAGATGATGGCCGTGTCGTaGTGGCCTGCCAGGTCTCGG +
Preference number: 5 (lower is better)
Translates to: LRLLSRRGWCLRGGAGREMMAVS*WPARSR
Trigger: CCGAGACCTGGCAGGCCACAACGACACGGCCATCAT...CTCCCTCCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp GAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCATCCCATCGGGCCCCTaGAGCTCCACTGGTGGCTTG +
Preference number: 5 (lower is better)
Translates to: EQLMRAARAKPRLSPRPGIPSGP*SSTGGL
Trigger: CAAGCCACCAGTGGAGCTCAAGGGGCCCGATGGGAT...GCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGTCCTCGGGCAGGCTGTaGAGGTCGGTGGCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQSSGRL*RSVASS
Trigger: GCTGCTGGCCACCGACCTCAACAGCCTGCCCGAGGA...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp TGCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCGATTCTGTGCGGGCGTaGCGCTCGAAGGCAGTGGCC +
Preference number: 5 (lower is better)
Translates to: CGVELGGRRACLASFSSADSVRA*RSKAVA
Trigger: GGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATC...GGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp GAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCAGGGCCAAGCCAAGGTaGTCCCCAAGGCCTGGCCTT +
Preference number: 5 (lower is better)
Translates to: EQLMRAARAKPRLSPRPGRAKPR*SPRPGL
Trigger: AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCT...GCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACGGGAGGAGGGCCTGTTaGGCCTCTTTCAGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHGRRAC*ASFSSA
Trigger: GGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCC...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS GCA 90 bp CTCTGGGTGCCTCACCACAGTCGGCCCTGGAGAGCTCAGTGGCCCTaGAGTGAAGCGGGGACTCACCAGGACTGTCAGCACAGAGGTCCC +
Preference number: 5 (lower is better)
Translates to: LWVPHHSRPWRAQWP*SEAGTHQDCQHRGP
Trigger: GGGACCTCTGTGCTGACAGTCCTGGTGAGTCCCCGCTTCACTGCAGGGCCACTGAGCTCTCCAGGGCCGACTGTGGTGAGGCACCCAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461841.7
ENST00000643732.1
CDS-3UTR CAA 90 bp GACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGGGAGCCCCGTGGGCACGTTGTCGTaGACATCCAACACATTGATC +
Preference number: 5 (lower is better)
Translates to: DPSRRRAHECMPHHPGSPVGTLS*TSNTLI
Trigger: GATCAATGTGTTGGATGTCAACGACAACGTGCCCAC...GGGGCTCCCAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp CGATGCAGGGAGGGGAGCATTGCCAGCCTCCCACGCTTCTGTCCCTCCCAAGCCGTCGATGGCCACCACTaGGTAGATGGAGACCCCCGC +
Preference number: 5 (lower is better)
Translates to: RCREGSIASLPRFCPSQAVDGHH*VDGDPR
Trigger: GCGGGGGTCTCCATCTACCAAGTGGTGGCCATCGAC...GGCTTGGGAGGGACAGAAGCGTGGGAGGCTGGCAATGCTCCCCTCCCTGCATCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CAA 90 bp GACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGGGAGCCCCAGAAAGATGGGCCGGTaGTCATTCACATCCAGGACA +
Preference number: 5 (lower is better)
Translates to: DPSRRRAHECMPHHPGSPRKMGR*SFTSRT
Trigger: TGTCCTGGATGTGAATGACAACCGGCCCATCTTTCT...GGGGCTCCCAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCCGCATCAGGAGCCCATaGCTGACATGGATCCGGAAG +
Preference number: 5 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPRIRSP*LTWIRK
Trigger: CTTCCGGATCCATGTCAGCAATGGGCTCCTGATGCG...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACGTGATGAGGCTGGTGTaGAGCGTGTCTGGGCCCTCA +
Preference number: 5 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHVMRLV*SVSGPS
Trigger: TGAGGGCCCAGACACGCTCAACACCAGCCTCATCAC...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTAAGGTGAGGCGTGCATaGCAGCCACTGTCAGCGTCA +
Preference number: 5 (lower is better)
Translates to: WTGVGCPASRGCPRWASLKVRRA*QPLSAS
Trigger: TGACGCTGACAGTGGCTGCAATGCACGCCTCACCTT...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTAAGGCGTCCTCCTGGTaGGGCACCAGGCGATCAGTG +
Preference number: 5 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPKASSW*GTRRSV
Trigger: CACTGATCGCCTGGTGCCCAACCAGGAGGACGCCTT...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp CCTCCTCCTCCTCCTCCTCCTCCTCTTCCTACTCTCGCTCCCTGTCCCCCAGGCAGCCCATTAAGGCCCTaGTCAGGGTCCACGGCTGCC +
Preference number: 5 (lower is better)
Translates to: PPPPPPPPLPTLAPCPPGSPLRP*SGSTAA
Trigger: GGCAGCCGTGGACCCTGACAAGGGCCTTAATGGGCT...GCCTGGGGGACAGGGAGCGAGAGTAGGAAGAGGAGGAGGAGGAGGAGGAGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACGCCCTCACGGTAAAGTaGAGCCAGTGCACCTCCTCG +
Preference number: 5 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHALTVK*SQCTSS
Trigger: CGAGGAGGTGCACTGGCTCAACTTTACCGTGAGGGC...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTGAATTTTCGCGACGGTaGCTGGCTACATCCCCAGGG +
Preference number: 5 (lower is better)
Translates to: WTGVGCPASRGCPRWASLEFSRR*LATSPG
Trigger: CCCTGGGGATGTAGCCAGCAACCGTCGCGAAAATTC...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGTGCTGAACTGGGGCTaGGAGAACTGTGGCCGGCAG +
Preference number: 5 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPVLNWG*ENCGRQ
Trigger: CTGCCGGCCACAGTTCTCCAAGCCCCAGTTCAGCAC...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACTGGAGGATGGTGCCGTaGGGTGGGCGCACAAAGACA +
Preference number: 5 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHWRMVP*GGRTKT
Trigger: TGTCTTTGTGCGCCCACCCAACGGCACCATCCTCCA...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGAACTCCCAGTCCCGGTaGCCCGCAGTCTTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRNSQSR*PAVFRK
Trigger: CTTCCTGAAGACTGCGGGCAACCGGGACTGGGAGTT...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACAACTCCCAGTCCCGGTaGCCCGCAGTCTTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHNSQSR*PAVFRK
Trigger: CTTCCTGAAGACTGCGGGCAACCGGGACTGGGAGTT...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp CCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGCGTGGTGGCTGGTCGTaGATGTCCTCTAGCACAACG +
Preference number: 5 (lower is better)
Translates to: PPLRLLSRRGWCLRGGAGRGGWS*MSSSTT
Trigger: CGTTGTGCTAGAGGACATCAACGACCAGCCACCACG...CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTCCAGCCACACAGGGTaGGCTCCATCAAAGGAGTAC +
Preference number: 5 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWSSHTG*APSKEY
Trigger: GTACTCCTTTGATGGAGCCAACCCTGTGTGGCTGGA...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGGCAGGAGGAGGCTTTTaGCACCATCCGCTGTGCAAA +
Preference number: 5 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWAGGGF*HHPLCK
Trigger: TTTGCACAGCGGATGGTGCAAAAAGCCTCCTCCTGC...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000224721.12
ENST00000398788.4
CDS-3UTR CAA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCTCGGGCAGGCTGTaGAGGTCGGTGGCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: WEGGGPVWPLSAQPEPSWSSGRL*RSVASS
Trigger: GCTGCTGGCCACCGACCTCAACAGCCTGCCCGAGGA...CCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTTGCAGGGGTGTGGATTaGGCGGATTCTGTGCGGGCG +
Preference number: 5 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLCRGVD*ADSVRA
Trigger: CGCCCGCACAGAATCCGCCAAATCCACACCCCTGCA...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp TGCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGCAGGGGTGTGGATTaGGCGGATTCTGTGCGGGCG +
Preference number: 5 (lower is better)
Translates to: CGVELGGRRACLASFSSACRGVD*ADSVRA
Trigger: CGCCCGCACAGAATCCGCCAAATCCACACCCCTGCA...GGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp GGGCACAGGGTGGAACAGGAAGAGGGCCTGAGCTTGGGCCCAGCTCCATCACTGGTCTTGGCAGCCGTCTaGGTGGCCCCTCTTCAGGGC +
Preference number: 5 (lower is better)
Translates to: GHRVEQEEGLSLGPAPSLVLAAV*VAPLQG
Trigger: GCCCTGAAGAGGGGCCACCAAGACGGCTGCCAAGAC...CAGTGATGGAGCTGGGCCCAAGCTCAGGCCCTCTTCCTGTTCCACCCTGTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp CAAGCCGGCCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCAACAACCCCAGACATATaGAGCCAAAAGCTCAGCCTG +
Preference number: 5 (lower is better)
Translates to: QAGRAGPEPPQGSRVHAPTTPDI*SQKLSL
Trigger: CAGGCTGAGCTTTTGGCTCAATATGTCTGGGGTTGT...TGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGGCCGGCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS CCA 90 bp CCCAGCATCCAGAGATCAGCACCAAAAGCCAGGCCACGTGGCAGCTaGTGGCAACATGGCGCCCCATGGCTCCGTGTGCGTGTGTGCAGC +
Preference number: 5 (lower is better)
Translates to: PSIQRSAPKARPRGS*WQHGAPWLRVRVCS
Trigger: GCTGCACACACGCACACGGAGCCATGGGGCGCCATGTTGCCACCAGCTGCCACGTGGCCTGGCTTTTGGTGCTGATCTCTGGATGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000461841.7
ENST00000616684.4
CDS-3UTR CAA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACATGATGATGGCCAAGTaGGCCAGGGTGGACAGAGGC +
Preference number: 5 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHMMMAK*ARVDRG
Trigger: GCCTCTGTCCACCCTGGCCAACTTGGCCATCATCAT...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCATGAGTCCCGTGTCCTaGTCCAGCGAGAACCTGTCA +
Preference number: 5 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSMSPVS*SSENLS
Trigger: TGACAGGTTCTCGCTGGACAAGGACACGGGACTCAT...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTTGACATCCAACACATaGATCCTGACCCGGCCTGTG +
Preference number: 5 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWLTSNT*ILTRPV
Trigger: CACAGGCCGGGTCAGGATCAATGTGTTGGATGTCAA...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp GGGCCCAGCCAGTGCTCTCCAGGTGGCCCTGCTCATCTGTACCCTCTGGTCATGGTGCTGGTGGAGCTCTaGGTGGGCGTGCCTGCATCA +
Preference number: 5 (lower is better)
Translates to: GPSQCSPGGPAHLYPLVMVLVEL*VGVPAS
Trigger: TGATGCAGGCACGCCCACCAAGAGCTCCACCAGCAC...CATGACCAGAGGGTACAGATGAGCAGGGCCACCTGGAGAGCACTGGCTGGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CAA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCTCAAACCGGGGGCTGTaGTCATTCTCGTCCAGCACA +
Preference number: 5 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSSNRGL*SFSSST
Trigger: TGTGCTGGACGAGAATGACAACAGCCCCCGGTTTGA...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp CCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGTTGCCCGCAGTGATGTaGAAGGTGAGGCGTGCATTG +
Preference number: 5 (lower is better)
Translates to: PPLRLLSRRGWCLRGGAGLPAVM*KVRRAL
Trigger: CAATGCACGCCTCACCTTCAACATCACTGCGGGCAA...CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp CCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGACACCGGTGCTGCTGTaGATGTCAAAGAGGCCACTC +
Preference number: 5 (lower is better)
Translates to: PPLRLLSRRGWCLRGGAGTPVLL*MSKRPL
Trigger: GAGTGGCCTCTTTGACATCAACAGCAGCACCGGTGT...CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGGGTAGGTCGCTGGCATaGTCAATCACTGAGAGAGTG +
Preference number: 5 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWGRSLA*SITERV
Trigger: CACTCTCTCAGTGATTGACAATGCCAGCGACCTACC...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGCCCTCACGGTAAAGTaGAGCCAGTGCACCTCCTCG +
Preference number: 5 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLALTVK*SQCTSS
Trigger: CGAGGAGGTGCACTGGCTCAACTTTACCGTGAGGGC...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTTGGAGGATGGTGCCGTaGGGTGGGCGCACAAAGACA +
Preference number: 5 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLWRMVP*GGRTKT
Trigger: TGTCTTTGTGCGCCCACCCAACGGCACCATCCTCCA...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp CGTTGGGGCCCTCATCTGCATCCACTGCGCCTGTCACGTTGCCCACGAGGGTGCTGGAGGATGGTGCCGTaGGGTGGGCGCACAAAGACA +
Preference number: 5 (lower is better)
Translates to: RWGPHLHPLRLSRCPRGCWRMVP*GGRTKT
Trigger: TGTCTTTGTGCGCCCACCCAACGGCACCATCCTCCA...GCACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCAGATGAGGGCCCCAACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp CCTCCTCCTCCTCCTCCTCCTCCTCTTCCTACTCTCGCTCCCTGTCCCCCAGGCAACTCCCAGTCCCGGTaGCCCGCAGTCTTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: PPPPPPPPLPTLAPCPPGNSQSR*PAVFRK
Trigger: CTTCCTGAAGACTGCGGGCAACCGGGACTGGGAGTT...GCCTGGGGGACAGGGAGCGAGAGTAGGAAGAGGAGGAGGAGGAGGAGGAGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGACGAAAAGGGGTTCGTaGTCATCGATGTCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWTKRGS*SSMSSR
Trigger: CCTGGAGGACATCGATGACAACGAACCCCTTTTCGT...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp TGCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCACTGGGGGCTGCCTTTaGGAGGCCTCACGAAAAGGG +
Preference number: 5 (lower is better)
Translates to: CGVELGGRRACLASFSSATGGCL*EASRKG
Trigger: CCCTTTTCGTGAGGCCTCCAAAAGGCAGCCCCCAGT...GGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp CGTTGTGGCCTGCCAGGTCTCGGGCCACAATGTCCACCACGAAGTAGCCGGGGCACTGGGGGCTGCCTTTaGGAGGCCTCACGAAAAGGG +
Preference number: 5 (lower is better)
Translates to: RCGLPGLGPQCPPRSSRGTGGCL*EASRKG
Trigger: CCCTTTTCGTGAGGCCTCCAAAAGGCAGCCCCCAGT...GCCCCGGCTACTTCGTGGTGGACATTGTGGCCCGAGACCTGGCAGGCCACAACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp TTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGGGAGCGTGGTGGCTGGTCGTaGATGTCCTCTAGCACAACG +
Preference number: 5 (lower is better)
Translates to: LRLLSRRGWCLRGGAGRERGGWS*MSSSTT
Trigger: CGTTGTGCTAGAGGACATCAACGACCAGCCACCACG...CTCCCTCCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACCGTGGTGGCTGGTCGTaGATGTCCTCTAGCACAACG +
Preference number: 5 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHRGGWS*MSSSTT
Trigger: CGTTGTGCTAGAGGACATCAACGACCAGCCACCACG...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCTCGTTAATGACGATCTaGACGCGCTGGTCGTCCCTC +
Preference number: 5 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSSLMTI*TRWSSL
Trigger: GAGGGACGACCAGCGCGTCAAGATCGTCATTAACGA...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp GGATCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGAGCTCCACTGGTGGCTaGTGGCGGAAGCGCAGGCTA +
Preference number: 5 (lower is better)
Translates to: GSEQLMRAARAKPRLSPRSSTGG*WRKRRL
Trigger: TAGCCTGCGCTTCCGCCACAAGCCACCAGTGGAGCT...CCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp GTTGGCAATGACCTTCCCTGCCGAGGAGTCCTCCAGCTGGACATACCCTGGGGGGATTCTGTGCGGGCGTaGCGCTCGAAGGCAGTGGCC +
Preference number: 5 (lower is better)
Translates to: VGNDLPCRGVLQLDIPWGDSVRA*RSKAVA
Trigger: GGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATC...CCCCCAGGGTATGTCCAGCTGGAGGACTCCTCGGCAGGGAAGGTCATTGCCAAC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp CAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCATGCTGTCGTGGGAGCAAGTaGGACTGCATGGGGAAGCAG +
Preference number: 5 (lower is better)
Translates to: QLPSLPGPLQRQLTPSPCCRGSK*DCMGKQ
Trigger: CTGCTTCCCCATGCAGTCCAACTTGCTCCCACGACA...GCATGGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS TCA 90 bp GCTCCCGGTCCAGGGGCCGGGGCCCTCGCATCAGGAGCCCATTGCTaGCATGGATCCGGAAGTTGTTGCCATGGTTACCATGGAGGATGC +
Preference number: 5 (lower is better)
Translates to: APGPGAGALASGAHC*HGSGSCCHGYHGGC
Trigger: GCATCCTCCATGGTAACCATGGCAACAACTTCCGGATCCATGTCAGCAATGGGCTCCTGATGCGAGGGCCCCGGCCCCTGGACCGGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398809.9
ENST00000616684.4
CDS TCA 90 bp CCAGGCCACCATCCCCAGAGTCTCGGTCTGTGGCTTGGACCACGATaGCTGACGTTCCAATGCCTGCGGTCTCTCGAAGCCCCAGACGGC +
Preference number: 5 (lower is better)
Translates to: PGHHPQSLGLWLGPR*LTFQCLRSLEAPDG
Trigger: GCCGTCTGGGGCTTCGAGAGACCGCAGGCATTGGAACGTCAGTCATCGTGGTCCAAGCCACAGACCGAGACTCTGGGGATGGTGGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000224721.12
ENST00000398792.3
ENST00000398809.9
ENST00000616684.4
CDS TCA 90 bp AGGGTCTCCATCCATGATGCTGTACTCCACCTGCCCGTTGGGTCCTaGGTCTCGGTCATGGGCCAGGAAGGTCCACACTCTGGGCCCCGG +
Preference number: 5 (lower is better)
Translates to: RVSIHDAVLHLPVGS*VSVMGQEGPHSGPR
Trigger: CCGGGGCCCAGAGTGTGGACCTTCCTGGCCCATGACCGAGACTCAGGACCCAACGGGCAGGTGGAGTACAGCATCATGGATGGAGACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS GCA 90 bp GGCACCCAGCAGCTGGTAGGTCACCACGGCGTAGATGTCTTGGTCTaGATCCAGGGCCAGGATGGGCCCATTGAGCACCGTGAGAGGGGT +
Preference number: 5 (lower is better)
Translates to: GTQQLVGHHGVDVLV*IQGQDGPIEHRERG
Trigger: ACCCCTCTCACGGTGCTCAATGGGCCCATCCTGGCCCTGGATGCAGACCAAGACATCTACGCCGTGGTGACCTACCAGCTGCTGGGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS GCA 90 bp GTGGGCGGAGGCCGGGGCAGCACCTGTGATGAAGTAGCTGAGCTCTaGATTGAGGCCCACGTCGTTGTCCGTGCAGTTCAGCCAGACCAC +
Preference number: 5 (lower is better)
Translates to: VGGGRGSTCDEVAEL*IEAHVVVRAVQPDH
Trigger: GTGGTCTGGCTGAACTGCACGGACAACGACGTGGGCCTCAATGCAGAGCTCAGCTACTTCATCACAGGTGCTGCCCCGGCCTCCGCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS CCA 90 bp GTCCCTTGGACAAAATCCCTCTGGGTGCCTCACCACAGTCGGCCCTaGAGAGCTCAGTGGCCCTGCAGTGAAGCGGGGACTCACCAGGAC +
Preference number: 5 (lower is better)
Translates to: VPWTKSLWVPHHSRP*RAQWPCSEAGTHQD
Trigger: GTCCTGGTGAGTCCCCGCTTCACTGCAGGGCCACTGAGCTCTCCAGGGCCGACTGTGGTGAGGCACCCAGAGGGATTTTGTCCAAGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461841.7
ENST00000643732.1
CDS-3UTR CAA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCGTATCAAAGAAGTGGTaGGTGAAGAAGGGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPVSKKW*VKKGSR
Trigger: CCGGCTGCCCTTCTTCACCAACCACTTCTTTGATAC...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp CCGGCCCACCGTCCCTCGACAGCCCCTGCCGGGCCCCGAGGACAACCGCAGCCATCAATAACCAGGATATaGAAGGTCGTGGTGACTGTA +
Preference number: 5 (lower is better)
Translates to: PAHRPSTAPAGPRGQPQPSITRI*KVVVTV
Trigger: TACAGTCACCACGACCTTCAATATCCTGGTTATTGA...TGGCTGCGGTTGTCCTCGGGGCCCGGCAGGGGCTGTCGAGGGACGGTGGGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp GGCCACATTCCTCCAAGTCACTGCTCTGTCACCCAGACTTGGGGCGGGGAGTGGTGGGTGGTGCGGATCTaGCCCGTGGTGCTGTTGAGG +
Preference number: 5 (lower is better)
Translates to: GHIPPSHCSVTQTWGGEWWVVRI*PVVLLR
Trigger: CCTCAACAGCACCACGGGCAAGATCCGCACCACCCA...CCACTCCCCGCCCCAAGTCTGGGTGACAGAGCAGTGACTTGGAGGAATGTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CAA 90 bp GGCCACATTCCTCCAAGTCACTGCTCTGTCACCCAGACTTGGGGCGGGGAGTGGGTCGATGGCCACCACTaGGTAGATGGAGACCCCCGC +
Preference number: 5 (lower is better)
Translates to: GHIPPSHCSVTQTWGGEWVDGHH*VDGDPR
Trigger: GCGGGGGTCTCCATCTACCAAGTGGTGGCCATCGAC...CCACTCCCCGCCCCAAGTCTGGGTGACAGAGCAGTGACTTGGAGGAATGTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CAA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGACATGGATCCGGAAGTaGTTGCCATGGTTACCATGG +
Preference number: 5 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWTWIRK*LPWLPW
Trigger: CCATGGTAACCATGGCAACAACTTCCGGATCCATGT...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp TCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGCCTCGTATGAGGCATaGGAGAACTGCACGGCCTCG +
Preference number: 5 (lower is better)
Translates to: SEQLMRAARAKPRLSPRPASYEA*ENCTAS
Trigger: CGAGGCCGTGCAGTTCTCCAATGCCTCATACGAGGC...AGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTGATGGCGTCTATCTaGAAGAGGGCTTTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRVMASI*KRALAW
Trigger: CCAGGCCAAAGCCCTCTTCAAGATAGACGCCATCAC...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp CCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGACTGGAGGGTTGTCATaGATGTCCAGGATGGTCACC +
Preference number: 5 (lower is better)
Translates to: PPLRLLSRRGWCLRGGAGTGGLS*MSRMVT
Trigger: GGTGACCATCCTGGACATCAATGACAACCCTCCAGT...CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCGGTAGGTCGCTGGCATaGTCAATCACTGAGAGAGTG +
Preference number: 5 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPGRSLA*SITERV
Trigger: CACTCTCTCAGTGATTGACAATGCCAGCGACCTACC...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTTGGGGCGTATTGTCATaGACGTCCAGGACGTTGACA +
Preference number: 5 (lower is better)
Translates to: WTGVGCPASRGCPRWASLWGVLS*TSRTLT
Trigger: TGTCAACGTCCTGGACGTCAATGACAATACGCCCCA...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTGTGATCCCAAAGGGCTaGAACTGGGGCGTATTGTCA +
Preference number: 5 (lower is better)
Translates to: WTGVGCPASRGCPRWASLVIPKG*NWGVLS
Trigger: TGACAATACGCCCCAGTTCAAGCCCTTTGGGATCAC...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp TGCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCGAATTTTCGCGACGGTaGCTGGCTACATCCCCAGGG +
Preference number: 5 (lower is better)
Translates to: CGVELGGRRACLASFSSAEFSRR*LATSPG
Trigger: CCCTGGGGATGTAGCCAGCAACCGTCGCGAAAATTC...GGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp CAAAGGCTGGGCCACGGCCTTGGCCCAGGCCCCACAGGACAGGAAGGGTGGTGGACAAAGACAGGGCGGTaGTCATTGACGTCGATGACC +
Preference number: 5 (lower is better)
Translates to: QRLGHGLGPGPTGQEGWWTKTGR*SLTSMT
Trigger: GGTCATCGACGTCAATGACAACCGCCCTGTCTTTGT...CCACCACCCTTCCTGTCCTGTGGGGCCTGGGCCAAGGCCGTGGCCCAGCCTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp GGATCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGGGTGTCCAGCTGCGATaGCTGGAGGCCTTGACGATG +
Preference number: 5 (lower is better)
Translates to: GSEQLMRAARAKPRLSPRGVQLR*LEALTM
Trigger: CATCGTCAAGGCCTCCAGCAATCGCAGCTGGACACC...CCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp ATTTGGCGGATTCTGTGCGGGCGTTGCGCTCGAAGGCAGTGGCCTCGGCAGCGGCGTGGTGGCTGGTCGTaGATGTCCTCTAGCACAACG +
Preference number: 5 (lower is better)
Translates to: IWRILCGRCARRQWPRQRRGGWS*MSSSTT
Trigger: CGTTGTGCTAGAGGACATCAACGACCAGCCACCACG...CCGCTGCCGAGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp TGCAGTGTGAGGTCAGCAACCAGGTCGAGGGTTGGGGAGGGTCCACGGGGAGGTGCAGTGTACTCAGCCTaGGTGAAGCGTGGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: CSVRSATRSRVGEGPRGGAVYSA*VKRGGW
Trigger: CCAGCCACCACGCTTCACCAAGGCTGAGTACACTGC...ACCTCCCCGTGGACCCTCCCCAACCCTCGACCTGGTTGCTGACCTCACACTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp CGTCGCGAAGTTTGTGCAGGGGTGTGGATTTGGCGGATTCTGTGCGGGCGTTGCAACTCTGAGCCCACCTaGGCGTCGGTGGCCACCCCT +
Preference number: 5 (lower is better)
Translates to: RREVCAGVWIWRILCGRCNSEPT*ASVATP
Trigger: AGGGGTGGCCACCGACGCCAAGGTGGGCTCAGAGTT...GCAACGCCCGCACAGAATCCGCCAAATCCACACCCCTGCACAAACTTCGCGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTCCAGCCACAATGGCCTaGAGCTTCCTCTTGTGTACA +
Preference number: 5 (lower is better)
Translates to: WTGVGCPASRGCPRWASLPATMA*SFLLCT
Trigger: TGTACACAAGAGGAAGCTCAAGGCCATTGTGGCTGG...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTCCCAGCTTGGCAATGTaGTCATACTCCTGGATGGCA +
Preference number: 5 (lower is better)
Translates to: WTGVGCPASRGCPRWASLPSLAM*SYSWMA
Trigger: TGCCATCCAGGAGTATGACAACATTGCCAAGCTGGG...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp CCTGGATCAACTCTGAGCCCACCTTGGCGTCGGTGGCCACCCCTGCAGTGTACTAGCTCCACTGGTGGCTaGTGGCGGAAGCGCAGGCTA +
Preference number: 5 (lower is better)
Translates to: PGSTLSPPWRRWPPLQCTSSTGG*WRKRRL
Trigger: TAGCCTGCGCTTCCGCCACAAGCCACCAGTGGAGCT...AGTACACTGCAGGGGTGGCCACCGACGCCAAGGTGGGCTCAGAGTTGATCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp CTCATCGATCATCTGGATCACCCGGTCCACGTCCAGGATGCGGTTGGTATCGCGTCCTCGGGCAGGCTGTaGAGGTCGGTGGCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: LIDHLDHPVHVQDAVGIASSGRL*RSVASS
Trigger: GCTGCTGGCCACCGACCTCAACAGCCTGCCCGAGGA...CGCGATACCAACCGCATCCTGGACGTGGACCGGGTGATCCAGATGATCGATGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTCAGTCTGTATCAGCTaGATTGGCCCCTCACGAATG +
Preference number: 5 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWSVCIS*IGPSRM
Trigger: CATTCGTGAGGGGCCAATCAAGCTGATACAGACTGA...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619887.4
CDS TCA 90 bp GCTGGTAGGCCTGTGTGGTCTCGTAGTCCAGCTCCCGGATCACTGTaGCGATACCGCGGGCGCTGTCAATGGCGAAGAATTGGGAGGGGG +
Preference number: 5 (lower is better)
Translates to: AGRPVWSRSPAPGSL*RYRGRCQWRRIGRG
Trigger: CCCCCTCCCAATTCTTCGCCATTGACAGCGCCCGCGGTATCGTCACAGTGATCCGGGAGCTGGACTACGAGACCACACAGGCCTACCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000442677.4
ENST00000461841.7
ENST00000616684.4
ENST00000643732.1
ENST00000646131.1
CDS CCA 90 bp CGGTCCAGGGGCCGGGGCCCTCGCATCAGGAGCCCATTGCTGACATaGATCCGGAAGTTGTTGCCATGGTTACCATGGAGGATGCGGTAC +
Preference number: 5 (lower is better)
Translates to: RSRGRGPRIRSPLLT*IRKLLPWLPWRMRY
Trigger: GTACCGCATCCTCCATGGTAACCATGGCAACAACTTCCGGATCCATGTCAGCAATGGGCTCCTGATGCGAGGGCCCCGGCCCCTGGACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398809.9
ENST00000616684.4
CDS CCA 90 bp AAATCCCTCTGGGTGCCTCACCACAGTCGGCCCTGGAGAGCTCAGTaGCCCTGCAGTGAAGCGGGGACTCACCAGGACTGTCAGCACAGA +
Preference number: 5 (lower is better)
Translates to: KSLWVPHHSRPWRAQ*PCSEAGTHQDCQHR
Trigger: TCTGTGCTGACAGTCCTGGTGAGTCCCCGCTTCACTGCAGGGCCACTGAGCTCTCCAGGGCCGACTGTGGTGAGGCACCCAGAGGGATTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461841.7
ENST00000643732.1
CDS CCA 90 bp GTGCCTCCTTCCCTGATTGCTGAGGTCCCTTGGACAAAATCCCTCTaGGTGCCTCACCACAGTCGGCCCTGGAGAGCTCAGTGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: VPPSLIAEVPWTKSL*VPHHSRPWRAQWPC
Trigger: GCAGGGCCACTGAGCTCTCCAGGGCCGACTGTGGTGAGGCACCCAGAGGGATTTTGTCCAAGGGACCTCAGCAATCAGGGAAGGAGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461841.7
ENST00000643732.1
CDS-3UTR CAA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTCCCAAATTCTCATCCTaGTCCACCACCTGGATGAAG +
Preference number: 5 (lower is better)
Translates to: WTGVGCPASRGCPRWASLPKFSS*STTWMK
Trigger: CTTCATCCAGGTGGTGGACAAGGATGAGAATTTGGG...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp GAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTGCATCATTGTCAGTaGCCAGGACTGTCAGCACAG +
Preference number: 5 (lower is better)
Translates to: EQLMRAARAKPRLSPRPGLHHCQ*PGLSAQ
Trigger: CTGTGCTGACAGTCCTGGCAACTGACAATGATGCAG...GCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp GGCCACATTCCTCCAAGTCACTGCTCTGTCACCCAGACTTGGGGCGGGGAGTGGTCCCCTGAGCGGGCATaGATCCGAAACTGGGTGGAG +
Preference number: 5 (lower is better)
Translates to: GHIPPSHCSVTQTWGGEWSPERA*IRNWVE
Trigger: CTCCACCCAGTTTCGGATCAATGCCCGCTCAGGGGA...CCACTCCCCGCCCCAAGTCTGGGTGACAGAGCAGTGACTTGGAGGAATGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CAA 90 bp ATGCGGACAGGCCACCGCCCTCTTGTCTGCATGGCAGATGGGCACAGGGTGGAATCCCCTGAGCGGGCATaGATCCGAAACTGGGTGGAG +
Preference number: 5 (lower is better)
Translates to: MRTGHRPLVCMADGHRVESPERA*IRNWVE
Trigger: CTCCACCCAGTTTCGGATCAATGCCCGCTCAGGGGA...TTCCACCCTGTGCCCATCTGCCATGCAGACAAGAGGGCGGTGGCCTGTCCGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTTCGGACACAGACACATaGTACACGGCCGGGAAGAAG +
Preference number: 5 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLSDTDT*YTAGKK
Trigger: CTTCTTCCCGGCCGTGTACAATGTGTCTGTGTCCGA...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp GCTGCCCAGCTCCTGTCCCAGTCAGCTGGCCAGGATCCCACCACAAAGCTGCCCTCGGACACAGACACATaGTACACGGCCGGGAAGAAG +
Preference number: 5 (lower is better)
Translates to: AAQLLSQSAGQDPTTKLPSDTDT*YTAGKK
Trigger: CTTCTTCCCGGCCGTGTACAATGTGTCTGTGTCCGA...GGGCAGCTTTGTGGTGGGATCCTGGCCAGCTGACTGGGACAGGAGCTGGGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CAA 90 bp GGATCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGACGGGGGCCTCATCGTaGATGTCCTCCACGTACACA +
Preference number: 5 (lower is better)
Translates to: GSEQLMRAARAKPRLSPRTGASS*MSSTYT
Trigger: TGTGTACGTGGAGGACATCAACGATGAGGCCCCCGT...CCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp TTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCTCAGGGTCCCAGGCCTaGACAGTAGCCACTCGCTGG +
Preference number: 5 (lower is better)
Translates to: FGLFQLSLSQAGPQTLGPSGSQA*TVATRW
Trigger: CCAGCGAGTGGCTACTGTCAAGGCCTGGGACCCTGA...GGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp TTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCAAGGCCCGCTCGCGGTaGCCCGCAGTGATGTTGAAG +
Preference number: 5 (lower is better)
Translates to: FGLFQLSLSQAGPQTLGPKARSR*PAVMLK
Trigger: CTTCAACATCACTGCGGGCAACCGCGAGCGGGCCTT...GGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp TTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGGGAGGGTAGGTCGCTGGCATaGTCAATCACTGAGAGAGTG +
Preference number: 5 (lower is better)
Translates to: LRLLSRRGWCLRGGAGREGRSLA*SITERV
Trigger: CACTCTCTCAGTGATTGACAATGCCAGCGACCTACC...CTCCCTCCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp CCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGTTGACGTCCAGGACGTaGACAGTCAGCTTGGCATTT +
Preference number: 5 (lower is better)
Translates to: PPLRLLSRRGWCLRGGAGLTSRT*TVSLAF
Trigger: AAATGCCAAGCTGACTGTCAACGTCCTGGACGTCAA...CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp GAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCTGGGGCGTATTGTCATaGACGTCCAGGACGTTGACA +
Preference number: 5 (lower is better)
Translates to: EQLMRAARAKPRLSPRPGWGVLS*TSRTLT
Trigger: TGTCAACGTCCTGGACGTCAATGACAATACGCCCCA...GCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp CTCATACACGCTTGTGCTGAACTGGGGCTTGGAGAACTGTGGCCGGCAGTCATTCGGGGCGGGGACCCGTaGTCTGAGGCCCTCACGGTA +
Preference number: 5 (lower is better)
Translates to: LIHACAELGLGELWPAVIRGGDP*SEALTV
Trigger: TACCGTGAGGGCCTCAGACAACGGGTCCCCGCCCCG...AATGACTGCCGGCCACAGTTCTCCAAGCCCCAGTTCAGCACAAGCGTGTATGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp GTAGCTGCTCCTTGTTCTCATCGATCATCTGGATCACCCGGTCCACGTCCAGGACGGGGCGGGGACCCGTaGTCTGAGGCCCTCACGGTA +
Preference number: 5 (lower is better)
Translates to: VAAPCSHRSSGSPGPRPGRGGDP*SEALTV
Trigger: TACCGTGAGGGCCTCAGACAACGGGTCCCCGCCCCG...TCCTGGACGTGGACCGGGTGATCCAGATGATCGATGAGAACAAGGAGCAGCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTCAATGAGTGCAAAGTaGCCTGAGTCAGCATCAGTG +
Preference number: 5 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWSMSAK*PESASV
Trigger: CACTGATGCTGACTCAGGCAACTTTGCACTCATTGA...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp CGTTGTGGCCTGCCAGGTCTCGGGCCACAATGTCCACCACGAAGTAGCCGGGGCTCACCCGTGGTGGGGTaGATGGCAAACTTGCTCTCT +
Preference number: 5 (lower is better)
Translates to: RCGLPGLGPQCPPRSSRGSPVVG*MANLLS
Trigger: AGAGAGCAAGTTTGCCATCAACCCCACCACGGGTGA...GCCCCGGCTACTTCGTGGTGGACATTGTGGCCCGAGACCTGGCAGGCCACAACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp TCATCTGCATCCACTGCGCCTGTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGGCTACATCCCCAGGGTaGTCTTTGGCCAAGGCAGTC +
Preference number: 5 (lower is better)
Translates to: SSASTAPVTLPTRVPRGEATSPG*SLAKAV
Trigger: GACTGCCTTGGCCAAAGACAACCCTGGGGATGTAGC...CTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCAGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGGAATTTTCGCGACGGTaGCTGGCTACATCCCCAGGG +
Preference number: 5 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQEFSRR*LATSPG
Trigger: CCCTGGGGATGTAGCCAGCAACCGTCGCGAAAATTC...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp ACAGATCCCTGGGCCGCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTACTCTCGCGAATTTTCGCGACGGTaGCTGGCTACATCCCCAGGG +
Preference number: 5 (lower is better)
Translates to: TDPWAASSSSSSSSSYSREFSRR*LATSPG
Trigger: CCCTGGGGATGTAGCCAGCAACCGTCGCGAAAATTC...GCGAGAGTAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGCGGCCCAGGGATCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTGGAGGATGGTGCCGTaGGGTGGGCGCACAAAGACA +
Preference number: 5 (lower is better)
Translates to: WEGGGPVWPLSAQPEPSWWRMVP*GGRTKT
Trigger: TGTCTTTGTGCGCCCACCCAACGGCACCATCCTCCA...CCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACACGAAAAGGGGTTCGTaGTCATCGATGTCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHTKRGS*SSMSSR
Trigger: CCTGGAGGACATCGATGACAACGAACCCCTTTTCGT...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGACTGGGGGCTGCCTTTaGGAGGCCTCACGAAAAGGG +
Preference number: 5 (lower is better)
Translates to: WEGGGPVWPLSAQPEPSWTGGCL*EASRKG
Trigger: CCCTTTTCGTGAGGCCTCCAAAAGGCAGCCCCCAGT...CCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGGCAGTGTACTCAGCCTaGGTGAAGCGTGGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: WEGGGPVWPLSAQPEPSWAVYSA*VKRGGW
Trigger: CCAGCCACCACGCTTCACCAAGGCTGAGTACACTGC...CCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp CGTCGCGAAGTTTGTGCAGGGGTGTGGATTTGGCGGATTCTGTGCGGGCGTTGCATGATGGCCGTGTCGTaGTGGCCTGCCAGGTCTCGG +
Preference number: 5 (lower is better)
Translates to: RREVCAGVWIWRILCGRCMMAVS*WPARSR
Trigger: CCGAGACCTGGCAGGCCACAACGACACGGCCATCAT...GCAACGCCCGCACAGAATCCGCCAAATCCACACCCCTGCACAAACTTCGCGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp TGCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTTCACCCGGCCCTTCTaGTCCACATGGAACTGCACA +
Preference number: 5 (lower is better)
Translates to: CGVELGGRRACLASFSSAFTRPF*STWNCT
Trigger: TGTGCAGTTCCATGTGGACAAGAAGGGCCGGGTGAA...GGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGCAGGAGGAGGCTTTTaGCACCATCCGCTGTGCAAA +
Preference number: 5 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLAGGGF*HHPLCK
Trigger: TTTGCACAGCGGATGGTGCAAAAAGCCTCCTCCTGC...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000642965.1
CDS-3UTR CAA 90 bp TTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCATCCCATCGGGCCCCTaGAGCTCCACTGGTGGCTTG +
Preference number: 5 (lower is better)
Translates to: FGLFQLSLSQAGPQTLGPIPSGP*SSTGGL
Trigger: CAAGCCACCAGTGGAGCTCAAGGGGCCCGATGGGAT...GGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp CTGATGTGGAGGATGGTGCCGTTGGGTGGGCGCACAAAGACAGGGCGGTTGTCATGCAGGGGTGTGGATTaGGCGGATTCTGTGCGGGCG +
Preference number: 5 (lower is better)
Translates to: LMWRMVPLGGRTKTGRLSCRGVD*ADSVRA
Trigger: CGCCCGCACAGAATCCGCCAAATCCACACCCCTGCA...TGACAACCGCCCTGTCTTTGTGCGCCCACCCAACGGCACCATCCTCCACATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp GCCTTGGTGAAGCGTGGTGGCTGGTCGTTGATGTCCTCTAGCACAACGCGCACCGGGAGGAGGGCCTGTTaGGCCTCTTTCAGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: ALVKRGGWSLMSSSTTRTGRRAC*ASFSSA
Trigger: GGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCC...GGTGCGCGTTGTGCTAGAGGACATCAACGACCAGCCACCACGCTTCACCAAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp GGGCACAGGGTGGAACAGGAAGAGGGCCTGAGCTTGGGCCCAGCTCCATCACTGGTCCAGCCCCTCACTTaGACTCCCCAGTTCTGTGCA +
Preference number: 5 (lower is better)
Translates to: GHRVEQEEGLSLGPAPSLVQPLT*TPQFCA
Trigger: TGCACAGAACTGGGGAGTCAAAGTGAGGGGCTGGAC...CAGTGATGGAGCTGGGCCCAAGCTCAGGCCCTCTTCCTGTTCCACCCTGTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CAA 90 bp ATGCGGACAGGCCACCGCCCTCTTGTCTGCATGGCAGATGGGCACAGGGTGGAATCTCCAAGCATGGTCTaGGCAGCCGTCTTGGTGGCC +
Preference number: 5 (lower is better)
Translates to: MRTGHRPLVCMADGHRVESPSMV*AAVLVA
Trigger: GGCCACCAAGACGGCTGCCAAGACCATGCTTGGAGA...TTCCACCCTGTGCCCATCTGCCATGCAGACAAGAGGGCGGTGGCCTGTCCGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp CAAGCCGGCCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCAAAGTTATTGACAGAGTaGGTCTTAAGTTTCCAGGCC +
Preference number: 5 (lower is better)
Translates to: QAGRAGPEPPQGSRVHAPKLLTE*VLSFQA
Trigger: GGCCTGGAAACTTAAGACCAACTCTGTCAATAACTT...TGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGGCCGGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp CCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGCCACAGAGCAAGTTATaGACAGAGTTGGTCTTAAGT +
Preference number: 5 (lower is better)
Translates to: PRWTRAAAGLTSACPTTLPQSKL*TELVLS
Trigger: ACTTAAGACCAACTCTGTCAATAACTTGCTCTGTGG...CAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp AGAAGGAAAAGTCCAGGAGGGGGAGGGCTCTCAATTGGGTTTCAGGCACCAGGCGGCCCCTCCACTTCCTaGAGAGGGCCCAGCCAGTGC +
Preference number: 5 (lower is better)
Translates to: RRKSPGGGGLSIGFQAPGGPSTS*RGPSQC
Trigger: GCACTGGCTGGGCCCTCTCAAGGAAGTGGAGGGGCC...GCCTGGTGCCTGAAACCCAATTGAGAGCCCTCCCCCTCCTGGACTTTTCCTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS TCA 90 bp GGTCCAGCATGGCGTGGGTGGTGCGGATCTTGCCCGTGGTGCTGTTaGGGCTGTAGAACTTGTTGGGTGGCTGGATGCTGTACACCAGGG +
Preference number: 5 (lower is better)
Translates to: GPAWRGWCGSCPWCC*GCRTCWVAGCCTPG
Trigger: CCCTGGTGTACAGCATCCAGCCACCCAACAAGTTCTACAGCCTCAACAGCACCACGGGCAAGATCCGCACCACCCACGCCATGCTGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000442677.4
ENST00000466757.8
ENST00000616684.4
CDS TCA 90 bp GCCACCATCCCCAGAGTCTCGGTCTGTGGCTTGGACCACGATGACTaGCGTTCCAATGCCTGCGGTCTCTCGAAGCCCCAGACGGCTGTA +
Preference number: 5 (lower is better)
Translates to: ATIPRVSVCGLDHDD*RSNACGLSKPQTAV
Trigger: TACAGCCGTCTGGGGCTTCGAGAGACCGCAGGCATTGGAACGTCAGTCATCGTGGTCCAAGCCACAGACCGAGACTCTGGGGATGGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000224721.12
ENST00000398792.3
ENST00000398809.9
ENST00000616684.4
CDS TCA 90 bp CCAGGGGCCTGGCCACAAACACTTCGCCAATGGAGTCATTGGTGGTaGCGATCTCAAAGGCCCCCGCGATGTTGCCAGAGGCCAGGGAGA +
Preference number: 5 (lower is better)
Translates to: PGAWPQTLRQWSHWW*RSQRPPRCCQRPGR
Trigger: TCTCCCTGGCCTCTGGCAACATCGCGGGGGCCTTTGAGATCGTCACCACCAATGACTCCATTGGCGAAGTGTTTGTGGCCAGGCCCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224721.12
ENST00000398792.3
CDS GCA 90 bp CGAGGTCGATGGCCACCACTTGGTAGATGGAGACCCCCGCCGGGATaGCTTCAAGCACCTCGGCCACAAAAGGCAGGTTCTGAAAGGTGG +
Preference number: 5 (lower is better)
Translates to: RGRWPPLGRWRPPPG*LQAPRPQKAGSERW
Trigger: CCACCTTTCAGAACCTGCCTTTTGTGGCCGAGGTGCTTGAAGGCATCCCGGCGGGGGTCTCCATCTACCAAGTGGTGGCCATCGACCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000442677.4
ENST00000466757.8
ENST00000616684.4
CDS CCA 90 bp CACGTCGTTGTCCGTGCAGTTCAGCCAGACCACCCGGAACTCGCGTaGCACGTCCTCGGACACAGACACATTGTACACGGCCGGGAAGAA +
Preference number: 5 (lower is better)
Translates to: HVVVRAVQPDHPELA*HVLGHRHIVHGREE
Trigger: TTCTTCCCGGCCGTGTACAATGTGTCTGTGTCCGAGGACGTGCCACGCGAGTTCCGGGTGGTCTGGCTGAACTGCACGGACAACGACGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000442677.4
ENST00000466757.8
ENST00000616684.4
CDS CCA 90 bp CAAAGGATGACGGTCCCCAGTAGAATCTGGGACTTGTGGCTGGGGTaGGCCCACAGCCTCCTCATAAGCTTGGGTCACGTGGCTCTGCCC +
Preference number: 5 (lower is better)
Translates to: QRMTVPSRIWDLWLG*AHSLLISLGHVALP
Trigger: GGGCAGAGCCACGTGACCCAAGCTTATGAGGAGGCTGTGGGCCCACCCCAGCCACAAGTCCCAGATTCTACTGGGGACCGTCATCCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475158.1
CDS CCA 90 bp ATCTCGTCACCCTCGAGGGAGGCTGAGCCTGCCCTAGAAGCCAGGTaGCTCGAAGTTAAAGCTGTGCGACCTCGGGCAAGTCACTCTCCC +
Preference number: 5 (lower is better)
Translates to: ISSPSREAEPALEAR*LEVKAVRPRASHSP
Trigger: GGGAGAGTGACTTGCCCGAGGTCGCACAGCTTTAACTTCGAGCCACCTGGCTTCTAGGGCAGGCTCAGCCTCCCTCGAGGGTGACGAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643732.1
CDS-3UTR CAA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGAACACCAGGGGGTCATaGTCCATGTCTTGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: WEGGGPVWPLSAQPEPSWNTRGS*SMSWAS
Trigger: GCTGGCCCAAGACATGGACAATGACCCCCTGGTGTT...CCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp GGCCACATTCCTCCAAGTCACTGCTCTGTCACCCAGACTTGGGGCGGGGAGTGGATGATGATGGCCAAGTaGGCCAGGGTGGACAGAGGC +
Preference number: 5 (lower is better)
Translates to: GHIPPSHCSVTQTWGGEWMMMAK*ARVDRG
Trigger: GCCTCTGTCCACCCTGGCCAACTTGGCCATCATCAT...CCACTCCCCGCCCCAAGTCTGGGTGACAGAGCAGTGACTTGGAGGAATGTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CAA 90 bp GGGCATTTCCAGCAGCTGGAGGTGATGCCACCTGGACTCGGAGGAGGACAGCTCATGATGATGGCCAAGTaGGCCAGGGTGGACAGAGGC +
Preference number: 5 (lower is better)
Translates to: GHFQQLEVMPPGLGGGQLMMMAK*ARVDRG
Trigger: GCCTCTGTCCACCCTGGCCAACTTGGCCATCATCAT...GAGCTGTCCTCCTCCGAGTCCAGGTGGCATCACCTCCAGCTGCTGGAAATGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CAA 90 bp TCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTCTGTACTCGGAGCTGTaGAACTCCGGGGCATTGTCA +
Preference number: 5 (lower is better)
Translates to: SEQLMRAARAKPRLSPRPLYSEL*NSGALS
Trigger: TGACAATGCCCCGGAGTTCAACAGCTCCGAGTACAG...AGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp CCCTCGCCTTTCTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGCTGTACTCGGAGCTGTaGAACTCCGGGGCATTGTCA +
Preference number: 5 (lower is better)
Translates to: PSPFSQLPSLPGPLQRQLLYSEL*NSGALS
Trigger: TGACAATGCCCCGGAGTTCAACAGCTCCGAGTACAG...CAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAGAAAGGCGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp CCCTCGCCTTTCTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGATGAGTCCCGTGTCCTaGTCCAGCGAGAACCTGTCA +
Preference number: 5 (lower is better)
Translates to: PSPFSQLPSLPGPLQRQLMSPVS*SSENLS
Trigger: TGACAGGTTCTCGCTGGACAAGGACACGGGACTCAT...CAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAGAAAGGCGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp CTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCCTGAAGGTGGGAGGGTaGTCATTCTCATCAAACACC +
Preference number: 5 (lower is better)
Translates to: LSAPVTPGTLAEATDPLPLKVGG*SFSSNT
Trigger: GGTGTTTGATGAGAATGACAACCCTCCCACCTTCAG...GGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCAGGATGTATTCAGACTaGGTCTCTCGGTCAAGCAGA +
Preference number: 5 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSRMYSD*VSRSSR
Trigger: TCTGCTTGACCGAGAGACCAAGTCTGAATACATCCT...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp GGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGATCTGAGCAGCTGATGCGGTGGTGGCCGACAGGGTaGGGGTGCCCTCGTCCTCCA +
Preference number: 5 (lower is better)
Translates to: GQMLNERLAKVGSEQLMRWWPTG*GCPRPP
Trigger: TGGAGGACGAGGGCACCCCAACCCTGTCGGCCACCA...CCGCATCAGCTGCTCAGATCCCACTTTTGCCAGACGCTCATTCAGCATCTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTACAGAAATGGTCAGCTaGTACTCTGGGATCCGCTCG +
Preference number: 5 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPTEMVS*YSGIRS
Trigger: CGAGCGGATCCCAGAGTACAAGCTGACCATTTCTGT...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACTTGACGTCCAGGACGTaGACAGTCAGCTTGGCATTT +
Preference number: 5 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHLTSRT*TVSLAF
Trigger: AAATGCCAAGCTGACTGTCAACGTCCTGGACGTCAA...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGTGATCCCAAAGGGCTaGAACTGGGGCGTATTGTCA +
Preference number: 5 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPVIPKG*NWGVLS
Trigger: TGACAATACGCCCCAGTTCAAGCCCTTTGGGATCAC...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCTCAATGAGTGCAAAGTaGCCTGAGTCAGCATCAGTG +
Preference number: 5 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSSMSAK*PESASV
Trigger: CACTGATGCTGACTCAGGCAACTTTGCACTCATTGA...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp CCTGGATCAACTCTGAGCCCACCTTGGCGTCGGTGGCCACCCCTGCAGTGTACTGAATTTTCGCGACGGTaGCTGGCTACATCCCCAGGG +
Preference number: 5 (lower is better)
Translates to: PGSTLSPPWRRWPPLQCTEFSRR*LATSPG
Trigger: CCCTGGGGATGTAGCCAGCAACCGTCGCGAAAATTC...AGTACACTGCAGGGGTGGCCACCGACGCCAAGGTGGGCTCAGAGTTGATCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp TCATCAGGCTTGACAGCTGCTGGCTCACGCCCAAAAGTTCCATGGGTGCGCGTGGTGCTGAACTGGGGCTaGGAGAACTGTGGCCGGCAG +
Preference number: 5 (lower is better)
Translates to: SSGLTAAGSRPKVPWVRVVLNWG*ENCGRQ
Trigger: CTGCCGGCCACAGTTCTCCAAGCCCCAGTTCAGCAC...CACGCGCACCCATGGAACTTTTGGGCGTGAGCCAGCAGCTGTCAAGCCTGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp TTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCTGGAGGATGGTGCCGTaGGGTGGGCGCACAAAGACA +
Preference number: 5 (lower is better)
Translates to: FGLFQLSLSQAGPQTLGPWRMVP*GGRTKT
Trigger: TGTCTTTGTGCGCCCACCCAACGGCACCATCCTCCA...GGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp TTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCAACTCCCAGTCCCGGTaGCCCGCAGTCTTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: FGLFQLSLSQAGPQTLGPNSQSR*PAVFRK
Trigger: CTTCCTGAAGACTGCGGGCAACCGGGACTGGGAGTT...GGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp TGCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCACGAAAAGGGGTTCGTaGTCATCGATGTCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: CGVELGGRRACLASFSSATKRGS*SSMSSR
Trigger: CCTGGAGGACATCGATGACAACGAACCCCTTTTCGT...GGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp ATGAACTCCTCCTCGAAGCCGCGCACACGGTCGGGGATCTCGTTAATGACGATCAACTCTGAGCCCACCTaGGCGTCGGTGGCCACCCCT +
Preference number: 5 (lower is better)
Translates to: MNSSSKPRTRSGISLMTINSEPT*ASVATP
Trigger: AGGGGTGGCCACCGACGCCAAGGTGGGCTCAGAGTT...GATCGTCATTAACGAGATCCCCGACCGTGTGCGCGGCTTCGAGGAGGAGTTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGTCGTTAATGACGATCTaGACGCGCTGGTCGTCCCTC +
Preference number: 5 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQSLMTI*TRWSSL
Trigger: GAGGGACGACCAGCGCGTCAAGATCGTCATTAACGA...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp TCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTTCGTTAATGACGATCTaGACGCGCTGGTCGTCCCTC +
Preference number: 5 (lower is better)
Translates to: SEQLMRAARAKPRLSPRPSLMTI*TRWSSL
Trigger: GAGGGACGACCAGCGCGTCAAGATCGTCATTAACGA...AGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp CGGCGATCTCACTCAGGTTCTCCGGTAGGTCATCCTCATGCTCCGCCTGGGCGGTCGTTAATGACGATCTaGACGCGCTGGTCGTCCCTC +
Preference number: 5 (lower is better)
Translates to: RRSHSGSPVGHPHAPPGRSLMTI*TRWSSL
Trigger: GAGGGACGACCAGCGCGTCAAGATCGTCATTAACGA...CCGCCCAGGCGGAGCATGAGGATGACCTACCGGAGAACCTGAGTGAGATCGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp CATCTGCATCCACTGCGCCTGTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGTATGGCCCCAGTGATGTaGGAGAGCAGGTGGATGAAC +
Preference number: 5 (lower is better)
Translates to: HLHPLRLSRCPRGCRVVSMAPVM*ESRWMN
Trigger: GTTCATCCACCTGCTCTCCAACATCACTGGGGCCAT...ACTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGACATGGAACTGCACATaGTCAGTATTGACAATGGCC +
Preference number: 5 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWTWNCT*SVLTMA
Trigger: GGCCATTGTCAATACTGACAATGTGCAGTTCCATGT...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp GCCTTGGTGAAGCGTGGTGGCTGGTCGTTGATGTCCTCTAGCACAACGCGCACCACGTCCAGGATGCGGTaGGTATCGCGGTTCACCACG +
Preference number: 5 (lower is better)
Translates to: ALVKRGGWSLMSSSTTRTTSRMR*VSRFTT
Trigger: CGTGGTGAACCGCGATACCAACCGCATCCTGGACGT...GGTGCGCGTTGTGCTAGAGGACATCAACGACCAGCCACCACGCTTCACCAAGGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp TTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGGGAGTTCCGTAGCTGCTCCTaGTTCTCATCGATCATCTGG +
Preference number: 5 (lower is better)
Translates to: LRLLSRRGWCLRGGAGREFRSCS*FSSIIW
Trigger: CCAGATGATCGATGAGAACAAGGAGCAGCTACGGAA...CTCCCTCCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp GAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCTTCCGTAGCTGCTCCTaGTTCTCATCGATCATCTGG +
Preference number: 5 (lower is better)
Translates to: EQLMRAARAKPRLSPRPGFRSCS*FSSIIW
Trigger: CCAGATGATCGATGAGAACAAGGAGCAGCTACGGAA...GCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTCCAGCCACAATGGCCTaGAGCTTCCTCTTGTGTACA +
Preference number: 5 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPPATMA*SFLLCT
Trigger: TGTACACAAGAGGAAGCTCAAGGCCATTGTGGCTGG...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTCCCAGCTTGGCAATGTaGTCATACTCCTGGATGGCA +
Preference number: 5 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPPSLAM*SYSWMA
Trigger: TGCCATCCAGGAGTATGACAACATTGCCAAGCTGGG...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp GGTCCAGGTCCCGCAGCACCAGCAGACACCCATCGGGCTGCAGATGGAAGTTCTTTCAGCAGCGAGCCCTaGATTGGCCCCTCACGAATG +
Preference number: 5 (lower is better)
Translates to: GPGPAAPADTHRAADGSSFSSEP*IGPSRM
Trigger: CATTCGTGAGGGGCCAATCAAGGGCTCGCTGCTGAA...AGAACTTCCATCTGCAGCCCGATGGGTGTCTGCTGGTGCTGCGGGACCTGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642965.1
CDS-3UTR CAA 90 bp TGCAGTGTGAGGTCAGCAACCAGGTCGAGGGTTGGGGAGGGTCCACGGGGAGGTGCAGGAGGAGGCTTTTaGCACCATCCGCTGTGCAAA +
Preference number: 5 (lower is better)
Translates to: CSVRSATRSRVGEGPRGGAGGGF*HHPLCK
Trigger: TTTGCACAGCGGATGGTGCAAAAAGCCTCCTCCTGC...ACCTCCCCGTGGACCCTCCCCAACCCTCGACCTGGTTGCTGACCTCACACTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000642965.1
CDS-3UTR CAA 90 bp GTAGGCCATGAAGAGGTCGAAGGTGCGCAGAATGCCGTCCATGCTCCCCATGGTATCCCATCGGGCCCCTaGAGCTCCACTGGTGGCTTG +
Preference number: 5 (lower is better)
Translates to: VGHEEVEGAQNAVHAPHGIPSGP*SSTGGL
Trigger: CAAGCCACCAGTGGAGCTCAAGGGGCCCGATGGGAT...ACCATGGGGAGCATGGACGGCATTCTGCGCACCTTCGACCTCTTCATGGCCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp ACGATGATCGCCATCTGCAGGGCAGACATGTCATCCGGCAGCCGGACAGAGATGTGCAGGGGTGTGGATTaGGCGGATTCTGTGCGGGCG +
Preference number: 5 (lower is better)
Translates to: TMIAICRADMSSGSRTEMCRGVD*ADSVRA
Trigger: CGCCCGCACAGAATCCGCCAAATCCACACCCCTGCA...CATCTCTGTCCGGCTGCCGGATGACATGTCTGCCCTGCAGATGGCGATCATCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp TCATCAGGCTTGACAGCTGCTGGCTCACGCCCAAAAGTTCCATGGGTGCGCGTGAGGGCCAAGCCAAGGTaGTCCCCAAGGCCTGGCCTT +
Preference number: 5 (lower is better)
Translates to: SSGLTAAGSRPKVPWVRVRAKPR*SPRPGL
Trigger: AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCT...CACGCGCACCCATGGAACTTTTGGGCGTGAGCCAGCAGCTGTCAAGCCTGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACTTGACATTGACTTTCTaGTCCACGTGGGGATGCCAC +
Preference number: 5 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHLTLTF*STWGCH
Trigger: GTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAA...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp CAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCATGCCCAGCTGATCTGCCTTaGAGCTTCTGTCTTGTTGCT +
Preference number: 5 (lower is better)
Translates to: QLPSLPGPLQRQLTPSPCPADLP*SFCLVA
Trigger: AGCAACAAGACAGAAGCTCAAAGGCAGATCAGCTGG...GCATGGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS GCA 90 bp GTTCCAATGCCTGCGGTCTCTCGAAGCCCCAGACGGCTGTACTGCTaGTGTGTGAACACGGGGGCCTCATCGTTGATGTCCTCCACGTAC +
Preference number: 5 (lower is better)
Translates to: VPMPAVSRSPRRLYC*CVNTGASSLMSSTY
Trigger: GTACGTGGAGGACATCAACGATGAGGCCCCCGTGTTCACACAGCAGCAGTACAGCCGTCTGGGGCTTCGAGAGACCGCAGGCATTGGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000224721.12
ENST00000398792.3
ENST00000398809.9
ENST00000616684.4
CDS GCA 90 bp GAGCTGTTGCGCCTGCTCCCTGGGCAAAGGAGCCCTTTCTTCTTGTaGCTGTTTACTTCCCAAGAGGGGAGCCTCGGCCAAGGGCTCTGT +
Preference number: 5 (lower is better)
Translates to: ELLRLLPGQRSPFFL*LFTSQEGSLGQGLC
Trigger: ACAGAGCCCTTGGCCGAGGCTCCCCTCTTGGGAAGTAAACAGGCACAAGAAGAAAGGGCTCCTTTGCCCAGGGAGCAGGCGCAACAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS CCA 90 bp AGAGATCAAAGTCGTAGCGGTCCACGGTCTCGTAGTCCAGTGGGATaGCCACCCGAATACGAATGTCCGCCTTCCCCTGGACGGAGGTCG +
Preference number: 5 (lower is better)
Translates to: RDQSRSGPRSRSPVG*PPEYECPPSPGRRS
Trigger: CGACCTCCGTCCAGGGGAAGGCGGACATTCGTATTCGGGTGGCCATCCCACTGGACTACGAGACCGTGGACCGCTACGACTTTGATCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000442677.4
ENST00000461841.7
ENST00000466757.8
ENST00000470494.5
ENST00000616684.4
ENST00000643732.1
ENST00000646131.1
CDS CCA 90 bp CAGGTCCAGTGCCTGGATGGTGATGAGGCTGGTGTTGAGCGTGTCTaGGCCCTCATCCAGCAGCACCTCATAGTGGGGCTGCTGGAACAT +
Preference number: 5 (lower is better)
Translates to: QVQCLDGDEAGVERV*ALIQQHLIVGLLEH
Trigger: ATGTTCCAGCAGCCCCACTATGAGGTGCTGCTGGATGAGGGCCCAGACACGCTCAACACCAGCCTCATCACCATCCAGGCACTGGACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS CCA 90 bp GCAATGACAGTGCCTGGCTCAGCCGACTCCAGCACGCTCACTGTCTaGATGGGGTTGAGGAACTCGGGGCGGGAGTCATTGATGTCATCG +
Preference number: 5 (lower is better)
Translates to: AMTVPGSADSSTLTV*MGLRNSGRESLMSS
Trigger: CGATGACATCAATGACTCCCGCCCCGAGTTCCTCAACCCCATCCAGACAGTGAGCGTGCTGGAGTCGGCTGAGCCAGGCACTGTCATTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS CCA 90 bp CTCAGGGATTTGGGGGTGCCTCCTTCCCTGATTGCTGAGGTCCCTTaGACAAAATCCCTCTGGGTGCCTCACCACAGTCGGCCCTGGAGA +
Preference number: 5 (lower is better)
Translates to: LRDLGVPPSLIAEVP*TKSLWVPHHSRPWR
Trigger: TCTCCAGGGCCGACTGTGGTGAGGCACCCAGAGGGATTTTGTCCAAGGGACCTCAGCAATCAGGGAAGGAGGCACCCCCAAATCCCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000461841.7
ENST00000643732.1
CDS-3UTR CAA 90 bp GGATCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGATGAAGTGGTGGGAGTaGTTCCCCACCAAGTACACC +
Preference number: 5 (lower is better)
Translates to: GSEQLMRAARAKPRLSPRMKWWE*FPTKYT
Trigger: GGTGTACTTGGTGGGGAACAACTCCCACCACTTCAT...CCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp TTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGGGAGTCAGGCACACTCTCATaGGCAAAGAGATCAAAGTCG +
Preference number: 5 (lower is better)
Translates to: LRLLSRRGWCLRGGAGRESGTLS*AKRSKS
Trigger: CGACTTTGATCTCTTTGCCAATGAGAGTGTGCCTGA...CTCCCTCCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp CCCTCGCCTTTCTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGTTGACATCCAACACATaGATCCTGACCCGGCCTGTG +
Preference number: 5 (lower is better)
Translates to: PSPFSQLPSLPGPLQRQLLTSNT*ILTRPV
Trigger: CACAGGCCGGGTCAGGATCAATGTGTTGGATGTCAA...CAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAGAAAGGCGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp AGAAGGAAAAGTCCAGGAGGGGGAGGGCTCTCAATTGGGTTTCAGGCACCAGGCTGGGTGGTGCGGATCTaGCCCGTGGTGCTGTTGAGG +
Preference number: 5 (lower is better)
Translates to: RRKSPGGGGLSIGFQAPGWVVRI*PVVLLR
Trigger: CCTCAACAGCACCACGGGCAAGATCCGCACCACCCA...GCCTGGTGCCTGAAACCCAATTGAGAGCCCTCCCCCTCCTGGACTTTTCCTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CAA 90 bp CCCAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTGGGTGGTGCGGATCTaGCCCGTGGTGCTGTTGAGG +
Preference number: 5 (lower is better)
Translates to: PSLSSSWDYRYLTPHLAIWVVRI*PVVLLR
Trigger: CCTCAACAGCACCACGGGCAAGATCCGCACCACCCA...GATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp GGGAGTGGGGCTCAGGGCTCCTCCCTAGGAATCATGGGGCCTTACCTCCCTCTAACAGAGACGACGATTTaGCGCATCAGCTCGGCCTCA +
Preference number: 5 (lower is better)
Translates to: GSGAQGSSLGIMGPYLPLTETTI*RISSAS
Trigger: TGAGGCCGAGCTGATGCGCAAAATCGTCGTCTCTGT...TAGAGGGAGGTAAGGCCCCATGATTCCTAGGGAGGAGCCCTGAGCCCCACTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CAA 90 bp TTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGGGAGGTGGGGTCATTGTCATaGAGATCCAAGAGGTTCACA +
Preference number: 5 (lower is better)
Translates to: LRLLSRRGWCLRGGAGREVGSLS*RSKRFT
Trigger: TGTGAACCTCTTGGATCTCAATGACAATGACCCCAC...CTCCCTCCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp AGTGGGGCTCAGGGCTCCTCCCTAGGAATCATGGGGCCTTACCTCCCTCTAGAATTGAGGCCCACGTCGTaGTCCGTGCAGTTCAGCCAG +
Preference number: 5 (lower is better)
Translates to: SGAQGSSLGIMGPYLPLELRPTS*SVQFSQ
Trigger: CTGGCTGAACTGCACGGACAACGACGTGGGCCTCAA...TTCTAGAGGGAGGTAAGGCCCCATGATTCCTAGGGAGGAGCCCTGAGCCCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CAA 90 bp GAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCTCATTCACACTGACATaGTATCCAAAGGGGCTCTCG +
Preference number: 5 (lower is better)
Translates to: EQLMRAARAKPRLSPRPGSFTLT*YPKGLS
Trigger: CGAGAGCCCCTTTGGATACAATGTCAGTGTGAATGA...GCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGTCGGGGCGGGAGTCATaGATGTCATCGATCAGAATG +
Preference number: 5 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQSGRES*MSSIRM
Trigger: CATTCTGATCGATGACATCAATGACTCCCGCCCCGA...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTTTGACGTCCAGGACGTaGACAGTCAGCTTGGCATTT +
Preference number: 5 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPLTSRT*TVSLAF
Trigger: AAATGCCAAGCTGACTGTCAACGTCCTGGACGTCAA...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp TCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGTGATCCCAAAGGGCTaGAACTGGGGCGTATTGTCA +
Preference number: 5 (lower is better)
Translates to: SEQLMRAARAKPRLSPRPVIPKG*NWGVLS
Trigger: TGACAATACGCCCCAGTTCAAGCCCTTTGGGATCAC...AGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp ATGTTGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCGCGCACACGGTCGGGGTCACCCGTGGTGGGGTaGATGGCAAACTTGCTCTCT +
Preference number: 5 (lower is better)
Translates to: MLESRWMNSSSKPRTRSGSPVVG*MANLLS
Trigger: AGAGAGCAAGTTTGCCATCAACCCCACCACGGGTGA...CCCCGACCGTGTGCGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp GTGGATAAGCAGTTCTGTCTGCGCAAAGTTCACCCGGCCCTTCTTGTCCACATGACTGCGCCTGTCACGTaGCCCACGAGGGTGCCGCGT +
Preference number: 5 (lower is better)
Translates to: VDKQFCLRKVHPALLVHMTAPVT*PTRVPR
Trigger: ACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAGT...CATGTGGACAAGAAGGGCCGGGTGAACTTTGCGCAGACAGAACTGCTTATCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp CGACAGAAGGGATCCAGCCACACAGGGTTGGCTCCATCAAAGGAGTACTTGTTGACTGCGCCTGTCACGTaGCCCACGAGGGTGCCGCGT +
Preference number: 5 (lower is better)
Translates to: RQKGSSHTGLAPSKEYLLTAPVT*PTRVPR
Trigger: ACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAGT...CAACAAGTACTCCTTTGATGGAGCCAACCCTGTGTGGCTGGATCCCTTCTGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp CTCGTAGTCCACTGTCCGGTTGGCAATGACCTTCCCTGCCGAGGAGTCCTCCAGCGTGGTGGCTGGTCGTaGATGTCCTCTAGCACAACG +
Preference number: 5 (lower is better)
Translates to: LVVHCPVGNDLPCRGVLQRGGWS*MSSSTT
Trigger: CGTTGTGCTAGAGGACATCAACGACCAGCCACCACG...CTGGAGGACTCCTCGGCAGGGAAGGTCATTGCCAACCGGACAGTGGACTACGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp ACGGTCGGGGATCTCGTTAATGACGATCTTGACGCGCTGGTCGTCCCTCAGGATATGATGGCCGTGTCGTaGTGGCCTGCCAGGTCTCGG +
Preference number: 5 (lower is better)
Translates to: TVGDLVNDDLDALVVPQDMMAVS*WPARSR
Trigger: CCGAGACCTGGCAGGCCACAACGACACGGCCATCAT...ATCCTGAGGGACGACCAGCGCGTCAAGATCGTCATTAACGAGATCCCCGACCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp GGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTCCGGCCAGCATGGCCCCAGTGATGTaGGAGAGCAGGTGGATGAAC +
Preference number: 5 (lower is better)
Translates to: GMWRKCSETWTGVGCPASMAPVM*ESRWMN
Trigger: GTTCATCCACCTGCTCTCCAACATCACTGGGGCCAT...GCTGGCCGGACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp CTCATCGATCATCTGGATCACCCGGTCCACGTCCAGGATGCGGTTGGTATCGCGACGTCCAGGATGCGGTaGGTATCGCGGTTCACCACG +
Preference number: 5 (lower is better)
Translates to: LIDHLDHPVHVQDAVGIATSRMR*VSRFTT
Trigger: CGTGGTGAACCGCGATACCAACCGCATCCTGGACGT...CGCGATACCAACCGCATCCTGGACGTGGACCGGGTGATCCAGATGATCGATGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp CCTCCTCCTCCTCCTCCTCCTCCTCTTCCTACTCTCGCTCCCTGTCCCCCAGGCTTCCGTAGCTGCTCCTaGTTCTCATCGATCATCTGG +
Preference number: 5 (lower is better)
Translates to: PPPPPPPPLPTLAPCPPGFRSCS*FSSIIW
Trigger: CCAGATGATCGATGAGAACAAGGAGCAGCTACGGAA...GCCTGGGGGACAGGGAGCGAGAGTAGGAAGAGGAGGAGGAGGAGGAGGAGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp ACAGATCCCTGGGCCGCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTACTCTCGCCCAGCCACAATGGCCTaGAGCTTCCTCTTGTGTACA +
Preference number: 5 (lower is better)
Translates to: TDPWAASSSSSSSSSYSRPATMA*SFLLCT
Trigger: TGTACACAAGAGGAAGCTCAAGGCCATTGTGGCTGG...GCGAGAGTAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGCGGCCCAGGGATCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp CCTGGATCAACTCTGAGCCCACCTTGGCGTCGGTGGCCACCCCTGCAGTGTACTTCCAGCCACACAGGGTaGGCTCCATCAAAGGAGTAC +
Preference number: 5 (lower is better)
Translates to: PGSTLSPPWRRWPPLQCTSSHTG*APSKEY
Trigger: GTACTCCTTTGATGGAGCCAACCCTGTGTGGCTGGA...AGTACACTGCAGGGGTGGCCACCGACGCCAAGGTGGGCTCAGAGTTGATCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp GGATCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCCAGCTTGGCAATGTaGTCATACTCCTGGATGGCA +
Preference number: 5 (lower is better)
Translates to: GSEQLMRAARAKPRLSPRPSLAM*SYSWMA
Trigger: TGCCATCCAGGAGTATGACAACATTGCCAAGCTGGG...CCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp CAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTATCCCATCGGGCCCCTaGAGCTCCACTGGTGGCTTG +
Preference number: 5 (lower is better)
Translates to: QQRGMWRKCSETWTGVGCIPSGP*SSTGGL
Trigger: CAAGCCACCAGTGGAGCTCAAGGGGCCCGATGGGAT...ACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp GTAGCTGCTCCTTGTTCTCATCGATCATCTGGATCACCCGGTCCACGTCCAGGAGATTCTGTGCGGGCGTaGCGCTCGAAGGCAGTGGCC +
Preference number: 5 (lower is better)
Translates to: VAAPCSHRSSGSPGPRPGDSVRA*RSKAVA
Trigger: GGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATC...TCCTGGACGTGGACCGGGTGATCCAGATGATCGATGAGAACAAGGAGCAGCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp TGGACGTCCAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTGCAGGGGTGTGGATTaGGCGGATTCTGTGCGGGCG +
Preference number: 5 (lower is better)
Translates to: WTSSREGCGGNVARLGLECRGVD*ADSVRA
Trigger: CGCCCGCACAGAATCCGCCAAATCCACACCCCTGCA...CTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTGGACGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTTTGACATTGACTTTCTaGTCCACGTGGGGATGCCAC +
Preference number: 5 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLLTLTF*STWGCH
Trigger: GTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAA...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp CTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCAGGAGCCCTTTCTTCTaGTGCCTGTTTACTTCCCAA +
Preference number: 5 (lower is better)
Translates to: LSAPVTPGTLAEATDPLPRSPFF*CLFTSQ
Trigger: TTGGGAAGTAAACAGGCACAAGAAGAAAGGGCTCCT...GGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CAA 90 bp CAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCATGCTCAATCAGGAAGGGATaGAAGATGATCGAGGAGGCT +
Preference number: 5 (lower is better)
Translates to: QLPSLPGPLQRQLTPSPCSIRKG*KMIEEA
Trigger: AGCCTCCTCGATCATCTTCAATCCCTTCCTGATTGA...GCATGGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp TCCACAAACATGCCCCCACATCCCCCTAGGTCTACCTGTAGATCCTCCTGCTTCTCACTCCCGGGACCCTaGCAGAGGCAACTGACCCCC +
Preference number: 5 (lower is better)
Translates to: STNMPPHPPRSTCRSSCFSLPGP*QRQLTP
Trigger: GGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGA...GAAGCAGGAGGATCTACAGGTAGACCTAGGGGGATGTGGGGGCATGTTTGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp ATTTGGCGGATTCTGTGCGGGCGTTGCGCTCGAAGGCAGTGGCCTCGGCAGCGGTCAGTCTGTATCAGCTaGATTGGCCCCTCACGAATG +
Preference number: 5 (lower is better)
Translates to: IWRILCGRCARRQWPRQRSVCIS*IGPSRM
Trigger: CATTCGTGAGGGGCCAATCAAGCTGATACAGACTGA...CCGCTGCCGAGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647092.1
CDS-3UTR CAA 90 bp CTGATGTGGAGGATGGTGCCGTTGGGTGGGCGCACAAAGACAGGGCGGTTGTCACAAGTGGAAGCCCATTaGGAGTGGAGAGCTCAGGGG +
Preference number: 5 (lower is better)
Translates to: LMWRMVPLGGRTKTGRLSQVEAH*EWRAQG
Trigger: CCCCTGAGCTCTCCACTCCAAATGGGCTTCCACTTG...TGACAACCGCCCTGTCTTTGTGCGCCCACCCAACGGCACCATCCTCCACATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642965.1
CDS GCA 90 bp GATGTAGACCTTCACGGTGGAGTCCACCTTGGGGCCGCCGTCATCTaGCACCACTGTCAAGGTATAGAAGTCGCCCTTCTCACGGTCCAC +
Preference number: 5 (lower is better)
Translates to: DVDLHGGVHLGAAVI*HHCQGIEVALLTVH
Trigger: GTGGACCGTGAGAAGGGCGACTTCTATACCTTGACAGTGGTGGCAGATGACGGCGGCCCCAAGGTGGACTCCACCGTGAAGGTCTACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS GCA 90 bp AGTGATGTAGACCACGGTGGAGTCCACCTTGGGGCCGCCGTCATCTaGCACCACTGTCAAGGTATAGAAGTCGCCCTTCTCACGGTCCAC +
Preference number: 5 (lower is better)
Translates to: SDVDHGGVHLGAAVI*HHCQGIEVALLTVH
Trigger: GTGGACCGTGAGAAGGGCGACTTCTATACCTTGACAGTGGTGGCAGATGACGGCGGCCCCAAGGTGGACTCCACCGTGGTCTACATCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398792.3
CDS CCA 90 bp GGCAAAGAGATCAAAGTCGTAGCGGTCCACGGTCTCGTAGTCCAGTaGGATGGCCACCCGAATACGAATGTCCGCCTTCCCCTGGACGGA +
Preference number: 5 (lower is better)
Translates to: GKEIKVVAVHGLVVQ*DGHPNTNVRLPLDG
Trigger: TCCGTCCAGGGGAAGGCGGACATTCGTATTCGGGTGGCCATCCCACTGGACTACGAGACCGTGGACCGCTACGACTTTGATCTCTTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000442677.4
ENST00000461841.7
ENST00000466757.8
ENST00000470494.5
ENST00000616684.4
ENST00000643732.1
ENST00000646131.1
CDS CCA 90 bp TGGATTCTCCGGGTTGTCCTTCACAGAAATGGTCAGCTTGTACTCTaGGATCCGCTCGCGGTCCAGGGGCCGGTTCACAGTGACGATCCC +
Preference number: 5 (lower is better)
Translates to: WILRVVLHRNGQLVL*DPLAVQGPVHSDDP
Trigger: GGGATCGTCACTGTGAACCGGCCCCTGGACCGCGAGCGGATCCCAGAGTACAAGCTGACCATTTCTGTGAAGGACAACCCGGAGAATCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS CCA 90 bp CATGCTGTTCAGGCCCTCATCCTTGTCCACCACCTGGATGAAGAGTaGAAGGGCAAAGCCGACCTGTGCCAGCTCAGTGATGGCCACGCT +
Preference number: 5 (lower is better)
Translates to: HAVQALILVHHLDEE*KGKADLCQLSDGHA
Trigger: AGCGTGGCCATCACTGAGCTGGCACAGGTCGGCTTTGCCCTTCCACTCTTCATCCAGGTGGTGGACAAGGATGAGGGCCTGAACAGCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470494.5
CDS-3UTR CAA 90 bp GCCACATTCCTCCAAGTCACTGCTCTGTCACCCAGACTTGGGGCGGGGAGTGGGGTATCAAAGAAGTGGTaGGTGAAGAAGGGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: ATFLQVTALSPRLGAGSGVSKKW*VKKGSR
Trigger: CCGGCTGCCCTTCTTCACCAACCACTTCTTTGATAC...CCCACTCCCCGCCCCAAGTCTGGGTGACAGAGCAGTGACTTGGAGGAATGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CAA 90 bp GAGTGGGGCTCAGGGCTCCTCCCTAGGAATCATGGGGCCTTACCTCCCTCTAGACTGTACTCGGAGCTGTaGAACTCCGGGGCATTGTCA +
Preference number: 5 (lower is better)
Translates to: EWGSGLLPRNHGALPPSRLYSEL*NSGALS
Trigger: TGACAATGCCCCGGAGTTCAACAGCTCCGAGTACAG...TCTAGAGGGAGGTAAGGCCCCATGATTCCTAGGGAGGAGCCCTGAGCCCCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CAA 90 bp GGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTCCGGCCAGCTCGTACAGGCTGATGTaGTACAGTGGCTGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: GMWRKCSETWTGVGCPASSYRLM*YSGWLK
Trigger: CTTCAGCCAGCCACTGTACAACATCAGCCTGTACGA...GCTGGCCGGACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp GATGAGGCCACATTCCTCCAAGTCACTGCTCTGTCACCCAGACTTGGGGCGGGGATGAGTCCCGTGTCCTaGTCCAGCGAGAACCTGTCA +
Preference number: 5 (lower is better)
Translates to: DEATFLQVTALSPRLGAGMSPVS*SSENLS
Trigger: TGACAGGTTCTCGCTGGACAAGGACACGGGACTCAT...CCCCGCCCCAAGTCTGGGTGACAGAGCAGTGACTTGGAGGAATGTGGCCTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CAA 90 bp TTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCACAGAGACGACGATTTaGCGCATCAGCTCGGCCTCA +
Preference number: 5 (lower is better)
Translates to: FGLFQLSLSQAGPQTLGPTETTI*RISSAS
Trigger: TGAGGCCGAGCTGATGCGCAAAATCGTCGTCTCTGT...GGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp ACCCGTGGGCCCCCAGTTTGCAGCTTTGGTATTAGATTACTGCTAGGGACCCTGGTGCTGGTGGAGCTCTaGGTGGGCGTGCCTGCATCA +
Preference number: 5 (lower is better)
Translates to: TRGPPVCSFGIRLLLGTLVLVEL*VGVPAS
Trigger: TGATGCAGGCACGCCCACCAAGAGCTCCACCAGCAC...CAGGGTCCCTAGCAGTAATCTAATACCAAAGCTGCAAACTGGGGGCCCACGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCGTAGGCACATTGTCGTaGATGTCATTCACATTCACA +
Preference number: 5 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSVGTLS*MSFTFT
Trigger: TGTGAATGTGAATGACATCAACGACAATGTGCCTAC...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp TGGACGTCCAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGCACGGCGTAGATGTCTaGGTCTGCATCCAGGGCCAG +
Preference number: 5 (lower is better)
Translates to: WTSSREGCGGNVARLGLEHGVDV*VCIQGQ
Trigger: CTGGCCCTGGATGCAGACCAAGACATCTACGCCGTG...CTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTGGACGTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGCTAAAGGTGGGCCGGTaGTCATTGTCATCCAGGATG +
Preference number: 5 (lower is better)
Translates to: WEGGGPVWPLSAQPEPSWLKVGR*SLSSRM
Trigger: CATCCTGGATGACAATGACAACCGGCCCACCTTTAG...CCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp CCGGTCCAGAGAAGACAGCACATAGATGTCACCCGTGGTGGGGTTGATGGCAAAAGCCCATTAAGGCCCTaGTCAGGGTCCACGGCTGCC +
Preference number: 5 (lower is better)
Translates to: PVQRRQHIDVTRGGVDGKSPLRP*SGSTAA
Trigger: GGCAGCCGTGGACCCTGACAAGGGCCTTAATGGGCT...TTTGCCATCAACCCCACCACGGGTGACATCTATGTGCTGTCTTCTCTGGACCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp TGCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCATGGGGTTGTTGTCATaGATGTCCACGATTTCCAGG +
Preference number: 5 (lower is better)
Translates to: CGVELGGRRACLASFSSAMGLLS*MSTISR
Trigger: CCTGGAAATCGTGGACATCAATGACAACAACCCCAT...GGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp TGGACGTCCAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGACTGGGGGCTGCCTTTaGGAGGCCTCACGAAAAGGG +
Preference number: 5 (lower is better)
Translates to: WTSSREGCGGNVARLGLETGGCL*EASRKG
Trigger: CCCTTTTCGTGAGGCCTCCAAAAGGCAGCCCCCAGT...CTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTGGACGTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp CATCTGCATCCACTGCGCCTGTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGTAAGACAAGGCTGTTGTaGCCAATGTCTGCATCCAGG +
Preference number: 5 (lower is better)
Translates to: HLHPLRLSRCPRGCRVVSKTRLL*PMSASR
Trigger: CCTGGATGCAGACATTGGCAACAACAGCCTTGTCTT...ACTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCAGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp TTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCATGGCCCCAGTGATGTaGGAGAGCAGGTGGATGAAC +
Preference number: 5 (lower is better)
Translates to: FGLFQLSLSQAGPQTLGPMAPVM*ESRWMN
Trigger: GTTCATCCACCTGCTCTCCAACATCACTGGGGCCAT...GGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp GTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGTGCTCAGGCACTGTCAGCAGCTGCACATTGTCAGTATaGACAATGGCCCCAGTGATG +
Preference number: 5 (lower is better)
Translates to: VTLPTRVPRGECSGTVSSCTLSV*TMAPVM
Trigger: CATCACTGGGGCCATTGTCAATACTGACAATGTGCA...GCTGCTGACAGTGCCTGAGCACTCACCACGCGGCACCCTCGTGGGCAACGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp GAGAGTGACCTCATAGGTGGCAACCAGCTCCCGATTCATGGGGGACTTCACCATAGCTCCACTGGTGGCTaGTGGCGGAAGCGCAGGCTA +
Preference number: 5 (lower is better)
Translates to: ESDLIGGNQLPIHGGLHHSSTGG*WRKRRL
Trigger: TAGCCTGCGCTTCCGCCACAAGCCACCAGTGGAGCT...ATGGTGAAGTCCCCCATGAATCGGGAGCTGGTTGCCACCTATGAGGTCACTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp GCCGGGGCTGTAGGCCATGAAGAGGTCGAAGGTGCGCAGAATGCCGTCCATGCTATCACGTCGCGAAGTTaGTGCAGGGGTGTGGATTTG +
Preference number: 5 (lower is better)
Translates to: AGAVGHEEVEGAQNAVHAITSRS*CRGVDL
Trigger: CAAATCCACACCCCTGCACAAACTTCGCGACGTGAT...AGCATGGACGGCATTCTGCGCACCTTCGACCTCTTCATGGCCTACAGCCCCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACGCTTGTTCATTGACATaGACTTTCTTGTCCACGTGG +
Preference number: 5 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHACSLT*TFLSTW
Trigger: CCACGTGGACAAGAAAGTCAATGTCAATGAACAAGC...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp AAAAACATGGCAAGGACCCAACTAAACACACCCGTGGGCCCCCAGTTTGCAGCTCAGGCCACCGCCCTCTaGTCTGCATGGCAGATGGGC +
Preference number: 5 (lower is better)
Translates to: KNMARTQLNTPVGPQFAAQATAL*SAWQMG
Trigger: GCCCATCTGCCATGCAGACAAGAGGGCGGTGGCCTG...AGCTGCAAACTGGGGGCCCACGGGTGTGTTTAGTTGGGTCCTTGCCATGTTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS GCA 90 bp CTTGTCCACCACCTGGATGAAGAGTGGAAGGGCAAAGCCGACCTGTaGCAGCTCAGTGATGGCCACGCTGTACTCGGAGCTGTTGAACTC +
Preference number: 5 (lower is better)
Translates to: LVHHLDEEWKGKADL*QLSDGHAVLGAVEL
Trigger: GAGTTCAACAGCTCCGAGTACAGCGTGGCCATCACTGAGCTGGCACAGGTCGGCTTTGCCCTTCCACTCTTCATCCAGGTGGTGGACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000442677.4
ENST00000461841.7
ENST00000466757.8
ENST00000470494.5
ENST00000616684.4
ENST00000643732.1
ENST00000646131.1
CDS GCA 90 bp GGTGGCGATGCCAGTTTTCTGGTTGTGGCCCACACCCCCGTCCACTaGGCGAACGATGAGGATGTATTCAGACTTGGTCTCTCGGTCAAG +
Preference number: 5 (lower is better)
Translates to: GGDASFLVVAHTPVH*ANDEDVFRLGLSVK
Trigger: CTTGACCGAGAGACCAAGTCTGAATACATCCTCATCGTTCGCGCAGTGGACGGGGGTGTGGGCCACAACCAGAAAACTGGCATCGCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000442677.4
ENST00000466757.8
ENST00000616684.4
CDS GCA 90 bp CAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTaGTCCCTGGGCAAAGGAGCCCTTTCTTCTTGTGCCTGTTTACTT +
Preference number: 5 (lower is better)
Translates to: QGPPFSPSEPWSCCA*SLGKGALSSCACLL
Trigger: AAGTAAACAGGCACAAGAAGAAAGGGCTCCTTTGCCCAGGGAGCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS CCA 90 bp CCCACAGGCGTGTCCTCGCTGATCAGCAGGTATGTATCAAAGAAGTaGTTGGTGAAGAAGGGCAGCCGGTTCACCTGGCCCCAGCATCCA +
Preference number: 5 (lower is better)
Translates to: PTGVSSLISRYVSKK*LVKKGSRFTWPQHP
Trigger: TGGATGCTGGGGCCAGGTGAACCGGCTGCCCTTCTTCACCAACCACTTCTTTGATACATACCTGCTGATCAGCGAGGACACGCCTGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000442677.4
ENST00000461841.7
ENST00000616684.4
CDS CCA 90 bp CTGGGCCCTCATCCAGCAGCACCTCATAGTGGGGCTGCTGGAACATaGGCGCGTTATCATTCTCATCCACAATGGTCACGTACACGTGCG +
Preference number: 5 (lower is better)
Translates to: LGPHPAAPHSGAAGT*ARYHSHPQWSRTRA
Trigger: CGCACGTGTACGTGACCATTGTGGATGAGAATGATAACGCGCCCATGTTCCAGCAGCCCCACTATGAGGTGCTGCTGGATGAGGGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS CCA 90 bp GTTGAGGTCGTGGTCAATGGCCGTGATATTGGCAATGACAGTGCCTaGCTCAGCCGACTCCAGCACGCTCACTGTCTGGATGGGGTTGAG +
Preference number: 5 (lower is better)
Translates to: VEVVVNGRDIGNDSA*LSRLQHAHCLDGVE
Trigger: CTCAACCCCATCCAGACAGTGAGCGTGCTGGAGTCGGCTGAGCCAGGCACTGTCATTGCCAATATCACGGCCATTGACCACGACCTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS CCA 90 bp GGCGTCCCCACTGGTGTATTCTGCACATCTGTCCTCTCTTCCATCTaGTGCCAGCATAGGACCGTTGGCTCGCAGCTCAGTAACAGAGGC +
Preference number: 5 (lower is better)
Translates to: GVPTGVFCTSVLSSI*CQHRTVGSQLSNRG
Trigger: GCCTCTGTTACTGAGCTGCGAGCCAACGGTCCTATGCTGGCACCAGATGGAAGAGAGGACAGATGTGCAGAATACACCAGTGGGGACGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643732.1
CDS-3UTR CAA 90 bp AGGCACCACCAGAGGCTAAAGCCCAACAGTAGAGCCCTGACCTCTTTTCCACCCAACACCAGGGGGTCATaGTCCATGTCTTGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: RHHQRLKPNSRALTSFPPNTRGS*SMSWAS
Trigger: GCTGGCCCAAGACATGGACAATGACCCCCTGGTGTT...GGGTGGAAAAGAGGTCAGGGCTCTACTGTTGGGCTTTAGCCTCTGGTGGTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CAA 90 bp CCCAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCATGATGATGGCCAAGTaGGCCAGGGTGGACAGAGGC +
Preference number: 5 (lower is better)
Translates to: PSLSSSWDYRYLTPHLAIMMMAK*ARVDRG
Trigger: GCCTCTGTCCACCCTGGCCAACTTGGCCATCATCAT...GATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp TCTACCTGTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAAGACATGATGATGGCCAAGTaGGCCAGGGTGGACAGAGGC +
Preference number: 5 (lower is better)
Translates to: STCRSSCFRDRCCRLQEDMMMAK*ARVDRG
Trigger: GCCTCTGTCCACCCTGGCCAACTTGGCCATCATCAT...GTCTTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp GATGCTCCCCGTCCCTGCAACCAACAGGTTCAGGAGGTCCCCAGGGAGCCAGTCAGGATGTATTCAGACTaGGTCTCTCGGTCAAGCAGA +
Preference number: 5 (lower is better)
Translates to: DAPRPCNQQVQEVPREPVRMYSD*VSRSSR
Trigger: TCTGCTTGACCGAGAGACCAAGTCTGAATACATCCT...GACTGGCTCCCTGGGGACCTCCTGAACCTGTTGGTTGCAGGGACGGGGAGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CAA 90 bp CCCTCGCCTTTCTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGGTGGGGTCATTGTCATaGAGATCCAAGAGGTTCACA +
Preference number: 5 (lower is better)
Translates to: PSPFSQLPSLPGPLQRQLVGSLS*RSKRFT
Trigger: TGTGAACCTCTTGGATCTCAATGACAATGACCCCAC...CAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAGAAAGGCGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp AACAGGTGGGAATTCTCAACAGGTCCCCAAGGAAGGATGAGGCCACATTCCTCCGTGCTGGTGGAGCTCTaGGTGGGCGTGCCTGCATCA +
Preference number: 5 (lower is better)
Translates to: NRWEFSTGPQGRMRPHSSVLVEL*VGVPAS
Trigger: TGATGCAGGCACGCCCACCAAGAGCTCCACCAGCAC...GGAGGAATGTGGCCTCATCCTTCCTTGGGGACCTGTTGAGAATTCCCACCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CAA 90 bp CAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCTTGAGGCCCACGTCGTaGTCCGTGCAGTTCAGCCAG +
Preference number: 5 (lower is better)
Translates to: QPLKQLGLQVPNTTLGHLLRPTS*SVQFSQ
Trigger: CTGGCTGAACTGCACGGACAACGACGTGGGCCTCAA...GAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGAGAAAGATGGGCCGGTaGTCATTCACATCCAGGACA +
Preference number: 5 (lower is better)
Translates to: WEGGGPVWPLSAQPEPSWRKMGR*SFTSRT
Trigger: TGTCCTGGATGTGAATGACAACCGGCCCATCTTTCT...CCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp CGCACACGGTCGGGGATCTCGTTAATGACGATCTTGACGCGCTGGTCGTCCCTCGTGATCCCAAAGGGCTaGAACTGGGGCGTATTGTCA +
Preference number: 5 (lower is better)
Translates to: RTRSGISLMTILTRWSSLVIPKG*NWGVLS
Trigger: TGACAATACGCCCCAGTTCAAGCCCTTTGGGATCAC...GAGGGACGACCAGCGCGTCAAGATCGTCATTAACGAGATCCCCGACCGTGTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp CTCATACACGCTTGTGCTGAACTGGGGCTTGGAGAACTGTGGCCGGCAGTCATTGCCCTCACGGTAAAGTaGAGCCAGTGCACCTCCTCG +
Preference number: 5 (lower is better)
Translates to: LIHACAELGLGELWPAVIALTVK*SQCTSS
Trigger: CGAGGAGGTGCACTGGCTCAACTTTACCGTGAGGGC...AATGACTGCCGGCCACAGTTCTCCAAGCCCCAGTTCAGCACAAGCGTGTATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp GGATCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGATGGGGTTGTTGTCATaGATGTCCACGATTTCCAGG +
Preference number: 5 (lower is better)
Translates to: GSEQLMRAARAKPRLSPRMGLLS*MSTISR
Trigger: CCTGGAAATCGTGGACATCAATGACAACAACCCCAT...CCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp ACAGATCCCTGGGCCGCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTACTCTCGCTCAATGAGTGCAAAGTaGCCTGAGTCAGCATCAGTG +
Preference number: 5 (lower is better)
Translates to: TDPWAASSSSSSSSSYSRSMSAK*PESASV
Trigger: CACTGATGCTGACTCAGGCAACTTTGCACTCATTGA...GCGAGAGTAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGCGGCCCAGGGATCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp TGGACGTCCAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGGCTACATCCCCAGGGTaGTCTTTGGCCAAGGCAGTC +
Preference number: 5 (lower is better)
Translates to: WTSSREGCGGNVARLGLEATSPG*SLAKAV
Trigger: GACTGCCTTGGCCAAAGACAACCCTGGGGATGTAGC...CTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTGGACGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp GAGAGTGACCTCATAGGTGGCAACCAGCTCCCGATTCATGGGGGACTTCACCATGGTGTCCAGCTGCGATaGCTGGAGGCCTTGACGATG +
Preference number: 5 (lower is better)
Translates to: ESDLIGGNQLPIHGGLHHGVQLR*LEALTM
Trigger: CATCGTCAAGGCCTCCAGCAATCGCAGCTGGACACC...ATGGTGAAGTCCCCCATGAATCGGGAGCTGGTTGCCACCTATGAGGTCACTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGAAGACAAGGCTGTTGTaGCCAATGTCTGCATCCAGG +
Preference number: 5 (lower is better)
Translates to: WEGGGPVWPLSAQPEPSWKTRLL*PMSASR
Trigger: CCTGGATGCAGACATTGGCAACAACAGCCTTGTCTT...CCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp GGATCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGTGCACATTGTCAGTATaGACAATGGCCCCAGTGATG +
Preference number: 5 (lower is better)
Translates to: GSEQLMRAARAKPRLSPRCTLSV*TMAPVM
Trigger: CATCACTGGGGCCATTGTCAATACTGACAATGTGCA...CCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp TTGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCGCGCACACGGTCGGGGATCTTCCGTAGCTGCTCCTaGTTCTCATCGATCATCTGG +
Preference number: 5 (lower is better)
Translates to: LESRWMNSSSKPRTRSGIFRSCS*FSSIIW
Trigger: CCAGATGATCGATGAGAACAAGGAGCAGCTACGGAA...GATCCCCGACCGTGTGCGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGCCATCAAAGGAGTACTaGTTGGTGTTAGGCATGTCC +
Preference number: 5 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQPSKEY*LVLGMS
Trigger: GGACATGCCTAACACCAACAAGTACTCCTTTGATGG...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp CAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTTTCAGCAGCGAGCCCTaGATTGGCCCCTCACGAATG +
Preference number: 5 (lower is better)
Translates to: QQRGMWRKCSETWTGVGCFSSEP*IGPSRM
Trigger: CATTCGTGAGGGGCCAATCAAGGGCTCGCTGCTGAA...ACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224721.12
ENST00000398788.4
CDS-3UTR CAA 90 bp GTGGATAAGCAGTTCTGTCTGCGCAAAGTTCACCCGGCCCTTCTTGTCCACATGGGGAGGAGGGCCTGTTaGGCCTCTTTCAGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: VDKQFCLRKVHPALLVHMGRRAC*ASFSSA
Trigger: GGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCC...CATGTGGACAAGAAGGGCCGGGTGAACTTTGCGCAGACAGAACTGCTTATCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTTGACATTGACTTTCTaGTCCACGTGGGGATGCCAC +
Preference number: 5 (lower is better)
Translates to: WEGGGPVWPLSAQPEPSWLTLTF*STWGCH
Trigger: GTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAA...CCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp AGGCACCACCAGAGGCTAAAGCCCAACAGTAGAGCCCTGACCTCTTTTCCACCCCCAGCTGCAAAGCCCTaGGGAAGAGCCAGGAGCAAA +
Preference number: 5 (lower is better)
Translates to: RHHQRLKPNSRALTSFPPPAAKP*GRARSK
Trigger: TTTGCTCCTGGCTCTTCCCAAGGGCTTTGCAGCTGG...GGGTGGAAAAGAGGTCAGGGCTCTACTGTTGGGCTTTAGCCTCTGGTGGTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CAA 90 bp GGGCACAGGGTGGAACAGGAAGAGGGCCTGAGCTTGGGCCCAGCTCCATCACTGTCAATCAGGAAGGGATaGAAGATGATCGAGGAGGCT +
Preference number: 5 (lower is better)
Translates to: GHRVEQEEGLSLGPAPSLSIRKG*KMIEEA
Trigger: AGCCTCCTCGATCATCTTCAATCCCTTCCTGATTGA...CAGTGATGGAGCTGGGCCCAAGCTCAGGCCCTCTTCCTGTTCCACCCTGTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp GTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAAGACAGTGGCCACCTTCACTTGGCCATaGGCTCACAATGTGGCCTTG +
Preference number: 5 (lower is better)
Translates to: VDPPASETGAAGCRKTVATFTWP*AHNVAL
Trigger: CAAGGCCACATTGTGAGCCAATGGCCAAGTGAAGGT...GGCCACTGTCTTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS TCA 90 bp GGGGGTTCTCCCGGTCCAGCAGGCCATTCAAGGTCAGCACTCCGCTaGTGTAGTCCAGGGCAAAGATGCTGTTGGTATTCCCTGAAACGA +
Preference number: 5 (lower is better)
Translates to: GGSPGPAGHSRSALR*CSPGQRCCWYSLKR
Trigger: TCGTTTCAGGGAATACCAACAGCATCTTTGCCCTGGACTACATCAGCGGAGTGCTGACCTTGAATGGCCTGCTGGACCGGGAGAACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000442677.4
ENST00000461841.7
ENST00000466757.8
ENST00000616684.4
ENST00000643732.1
ENST00000646131.1
CDS TCA 90 bp CAGTTTTCTGGTTGTGGCCCACACCCCCGTCCACTGCGCGAACGATaGGGATGTATTCAGACTTGGTCTCTCGGTCAAGCAGAGACGTGG +
Preference number: 5 (lower is better)
Translates to: QFSGCGPHPRPLRER*GCIQTWSLGQAETW
Trigger: CCACGTCTCTGCTTGACCGAGAGACCAAGTCTGAATACATCCTCATCGTTCGCGCAGTGGACGGGGGTGTGGGCCACAACCAGAAAACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000442677.4
ENST00000466757.8
ENST00000616684.4
CDS TCA 90 bp AATCTCAGTACCCAGTGCCAGATTCTCCAGGATGGCAGCCTCGTATaGGGCATTGGAGAACTGCACGGCCTCGTCCAGCTCGTTGAGCAG +
Preference number: 5 (lower is better)
Translates to: NLSTQCQILQDGSLV*GIGELHGLVQLVEQ
Trigger: CTGCTCAACGAGCTGGACGAGGCCGTGCAGTTCTCCAATGCCTCATACGAGGCTGCCATCCTGGAGAATCTGGCACTGGGTACTGAGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224721.12
ENST00000398792.3
ENST00000398809.9
ENST00000616684.4
CDS TCA 90 bp CTTGCTGGGCCCTGGCTCTCTTCTCAACTCCTTTCCGGGAAATTGTaGCGTCTCTTTCTCCCCGCTACTCTGAAAGGCCCTTCTGGGTGG +
Preference number: 5 (lower is better)
Translates to: LAGPWLSSQLLSGKL*RLFLPATLKGPSGW
Trigger: CCACCCAGAAGGGCCTTTCAGAGTAGCGGGGAGAAAGAGACGTCACAATTTCCCGGAAAGGAGTTGAGAAGAGAGCCAGGGCCCAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS TCA 90 bp ACAAACACAGCTCAGGGATTTGGGGGTGCCTCCTTCCCTGATTGCTaGGGTCCCTTGGACAAAATCCCTCTGGGTGCCTCACCACAGTCG +
Preference number: 5 (lower is better)
Translates to: TNTAQGFGGASFPDC*GPLDKIPLGASPQS
Trigger: CGACTGTGGTGAGGCACCCAGAGGGATTTTGTCCAAGGGACCTCAGCAATCAGGGAAGGAGGCACCCCCAAATCCCTGAGCTGTGTTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000461841.7
ENST00000643732.1
CDS GCA 90 bp GTCCCCACTGGTGTATTCTGCACATCTGTCCTCTCTTCCATCTGGTaGCAGCATAGGACCGTTGGCTCGCAGCTCAGTAACAGAGGCCAG +
Preference number: 5 (lower is better)
Translates to: VPTGVFCTSVLSSIW*QHRTVGSQLSNRGQ
Trigger: CTGGCCTCTGTTACTGAGCTGCGAGCCAACGGTCCTATGCTGGCACCAGATGGAAGAGAGGACAGATGTGCAGAATACACCAGTGGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643732.1
CDS CCA 90 bp GTTCAGGCCCAAATTCTCATCCTTGTCCACCACCTGGATGAAGAGTaGAAGGGCAAAGCCGACCTGTGCCAGCTCAGTGATGGCCACGCT +
Preference number: 5 (lower is better)
Translates to: VQAQILILVHHLDEE*KGKADLCQLSDGHA
Trigger: AGCGTGGCCATCACTGAGCTGGCACAGGTCGGCTTTGCCCTTCCACTCTTCATCCAGGTGGTGGACAAGGATGAGAATTTGGGCCTGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000442677.4
ENST00000461841.7
ENST00000616684.4
ENST00000646131.1
CDS CCA 90 bp TCCAGGAGGGTGATGTTTACGGTGGCGATGCCAGTTTTCTGGTTGTaGCCCACACCCCCGTCCACTGCGCGAACGATGAGGATGTATTCA +
Preference number: 5 (lower is better)
Translates to: SRRVMFTVAMPVFWL*PTPPSTARTMRMYS
Trigger: TGAATACATCCTCATCGTTCGCGCAGTGGACGGGGGTGTGGGCCACAACCAGAAAACTGGCATCGCCACCGTAAACATCACCCTCCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000442677.4
ENST00000466757.8
ENST00000616684.4
CDS CCA 90 bp ATTGATGTCCAGGATGGTCACCTGCAGGATGTGGTCCTTCTTCCGTaGAGGGGTGCCTCGGTCAGAAGCCACAACCTGGAGGATGTAGTG +
Preference number: 5 (lower is better)
Translates to: IDVQDGHLQDVVLLP*RGASVRSHNLEDVV
Trigger: CACTACATCCTCCAGGTTGTGGCTTCTGACCGAGGCACCCCTCCACGGAAGAAGGACCACATCCTGCAGGTGACCATCCTGGACATCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224721.12
ENST00000398792.3
CDS CCA 90 bp CACCCAAATTGTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTaGAGCTGTTGCGCCTGCTCCCTGGGCAAAGGAGCCCTTTCTTCT +
Preference number: 5 (lower is better)
Translates to: HPNCFQGPPFSPSEP*SCCACSLGKGALSS
Trigger: AGAAGAAAGGGCTCCTTTGCCCAGGGAGCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACAATTTGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CAA 90 bp GAGTGGGGCTCAGGGCTCCTCCCTAGGAATCATGGGGCCTTACCTCCCTCTAGACCCAAATTCTCATCCTaGTCCACCACCTGGATGAAG +
Preference number: 5 (lower is better)
Translates to: EWGSGLLPRNHGALPPSRPKFSS*STTWMK
Trigger: CTTCATCCAGGTGGTGGACAAGGATGAGAATTTGGG...TCTAGAGGGAGGTAAGGCCCCATGATTCCTAGGGAGGAGCCCTGAGCCCCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CAA 90 bp GTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAAGACAGTGGCCCCCAAATTCTCATCCTaGTCCACCACCTGGATGAAG +
Preference number: 5 (lower is better)
Translates to: VDPPASETGAAGCRKTVAPKFSS*STTWMK
Trigger: CTTCATCCAGGTGGTGGACAAGGATGAGAATTTGGG...GGCCACTGTCTTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CAA 90 bp AGTGGGGCTCAGGGCTCCTCCCTAGGAATCATGGGGCCTTACCTCCCTCTAGAATCGTACAGGCTGATGTaGTACAGTGGCTGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: SGAQGSSLGIMGPYLPLESYRLM*YSGWLK
Trigger: CTTCAGCCAGCCACTGTACAACATCAGCCTGTACGA...TTCTAGAGGGAGGTAAGGCCCCATGATTCCTAGGGAGGAGCCCTGAGCCCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CAA 90 bp CCCAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCATGAGTCCCGTGTCCTaGTCCAGCGAGAACCTGTCA +
Preference number: 5 (lower is better)
Translates to: PSLSSSWDYRYLTPHLAIMSPVS*SSENLS
Trigger: TGACAGGTTCTCGCTGGACAAGGACACGGGACTCAT...GATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp TCTGCCTTTGAGCTTCTGTCTTGTTGCTGTTGCAGGAGCCATGAGCACAGAGGGTCCCCTGAGCGGGCATaGATCCGAAACTGGGTGGAG +
Preference number: 5 (lower is better)
Translates to: SAFELLSCCCCRSHEHRGSPERA*IRNWVE
Trigger: CTCCACCCAGTTTCGGATCAATGCCCGCTCAGGGGA...CCCTCTGTGCTCATGGCTCCTGCAACAGCAACAAGACAGAAGCTCAAAGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp CATCCACATTCCCTAGGTAAGTCTTCCCTATACCCGCTGCCCTGGGTCCAGCTGGTGGGGTGGTTGTCATaGATGTCCAGGAGGGTGATG +
Preference number: 5 (lower is better)
Translates to: HPHSLGKSSLYPLPWVQLVGWLS*MSRRVM
Trigger: CATCACCCTCCTGGACATCAATGACAACCACCCCAC...CAGCTGGACCCAGGGCAGCGGGTATAGGGAAGACTTACCTAGGGAATGTGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp TCCAGGTGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTTTGGGTGGTGCGGATCTaGCCCGTGGTGCTGTTGAGG +
Preference number: 5 (lower is better)
Translates to: SRCQSPAWRSCQMAKVPFWVVRI*PVVLLR
Trigger: CCTCAACAGCACCACGGGCAAGATCCGCACCACCCA...AAAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCACCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp CCCAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCACAGAGACGACGATTTaGCGCATCAGCTCGGCCTCA +
Preference number: 5 (lower is better)
Translates to: PSLSSSWDYRYLTPHLAITETTI*RISSAS
Trigger: TGAGGCCGAGCTGATGCGCAAAATCGTCGTCTCTGT...GATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp ATGAACCTTGGTAGATGCTCCCCGTCCCTGCAACCAACAGGTTCAGGAGGTCCCTCGGACACAGACACATaGTACACGGCCGGGAAGAAG +
Preference number: 5 (lower is better)
Translates to: MNLGRCSPSLQPTGSGGPSDTDT*YTAGKK
Trigger: CTTCTTCCCGGCCGTGTACAATGTGTCTGTGTCCGA...GGGACCTCCTGAACCTGTTGGTTGCAGGGACGGGGAGCATCTACCAAGGTTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CAA 90 bp TCTGCCTTTGAGCTTCTGTCTTGTTGCTGTTGCAGGAGCCATGAGCACAGAGGGTTGAGGCCCACGTCGTaGTCCGTGCAGTTCAGCCAG +
Preference number: 5 (lower is better)
Translates to: SAFELLSCCCCRSHEHRGLRPTS*SVQFSQ
Trigger: CTGGCTGAACTGCACGGACAACGACGTGGGCCTCAA...CCCTCTGTGCTCATGGCTCCTGCAACAGCAACAAGACAGAAGCTCAAAGGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp CAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCCGCATCAGGAGCCCATaGCTGACATGGATCCGGAAG +
Preference number: 5 (lower is better)
Translates to: QPLKQLGLQVPNTTLGHLRIRSP*LTWIRK
Trigger: CTTCCGGATCCATGTCAGCAATGGGCTCCTGATGCG...GAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp CTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGGCCTCGTATGAGGCATaGGAGAACTGCACGGCCTCG +
Preference number: 5 (lower is better)
Translates to: LSSSWDYRYLTPHLAISRASYEA*ENCTAS
Trigger: CGAGGCCGTGCAGTTCTCCAATGCCTCATACGAGGC...CCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp CCCAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCGTGATGGCGTCTATCTaGAAGAGGGCTTTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: PSLSSSWDYRYLTPHLAIVMASI*KRALAW
Trigger: CCAGGCCAAAGCCCTCTTCAAGATAGACGCCATCAC...GATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp ACGATGATCGCCATCTGCAGGGCAGACATGTCATCCGGCAGCCGGACAGAGATGGGTAGGTCGCTGGCATaGTCAATCACTGAGAGAGTG +
Preference number: 5 (lower is better)
Translates to: TMIAICRADMSSGSRTEMGRSLA*SITERV
Trigger: CACTCTCTCAGTGATTGACAATGCCAGCGACCTACC...CATCTCTGTCCGGCTGCCGGATGACATGTCTGCCCTGCAGATGGCGATCATCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp CAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTTCACCCGTGGTGGGGTaGATGGCAAACTTGCTCTCT +
Preference number: 5 (lower is better)
Translates to: QQRGMWRKCSETWTGVGCSPVVG*MANLLS
Trigger: AGAGAGCAAGTTTGCCATCAACCCCACCACGGGTGA...ACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp ACGATGATCGCCATCTGCAGGGCAGACATGTCATCCGGCAGCCGGACAGAGATGACAAAGACAGGGCGGTaGTCATTGACGTCGATGACC +
Preference number: 5 (lower is better)
Translates to: TMIAICRADMSSGSRTEMTKTGR*SLTSMT
Trigger: GGTCATCGACGTCAATGACAACCGCCCTGTCTTTGT...CATCTCTGTCCGGCTGCCGGATGACATGTCTGCCCTGCAGATGGCGATCATCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp ACGATGATCGCCATCTGCAGGGCAGACATGTCATCCGGCAGCCGGACAGAGATGACGAAAAGGGGTTCGTaGTCATCGATGTCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: TMIAICRADMSSGSRTEMTKRGS*SSMSSR
Trigger: CCTGGAGGACATCGATGACAACGAACCCCTTTTCGT...CATCTCTGTCCGGCTGCCGGATGACATGTCTGCCCTGCAGATGGCGATCATCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp GATTGGCCCCTCACGAATGATCTGGCCCAGCTTGGCAATGTTGTCATACTCCTGGGTGTCCAGCTGCGATaGCTGGAGGCCTTGACGATG +
Preference number: 5 (lower is better)
Translates to: DWPLTNDLAQLGNVVILLGVQLR*LEALTM
Trigger: CATCGTCAAGGCCTCCAGCAATCGCAGCTGGACACC...CAGGAGTATGACAACATTGCCAAGCTGGGCCAGATCATTCGTGAGGGGCCAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp CAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTTTCACCCGGCCCTTCTaGTCCACATGGAACTGCACA +
Preference number: 5 (lower is better)
Translates to: QQRGMWRKCSETWTGVGCFTRPF*STWNCT
Trigger: TGTGCAGTTCCATGTGGACAAGAAGGGCCGGGTGAA...ACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp GGATCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGTCAAAGGAGTACTTGTaGGTGTTAGGCATGTCCATG +
Preference number: 5 (lower is better)
Translates to: GSEQLMRAARAKPRLSPRSKEYL*VLGMSM
Trigger: CATGGACATGCCTAACACCAACAAGTACTCCTTTGA...CCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGTCAAAGGAGTACTTGTaGGTGTTAGGCATGTCCATG +
Preference number: 5 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQSKEYL*VLGMSM
Trigger: CATGGACATGCCTAACACCAACAAGTACTCCTTTGA...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp TCATCTGCATCCACTGCGCCTGTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGTCAAAGGAGTACTTGTaGGTGTTAGGCATGTCCATG +
Preference number: 5 (lower is better)
Translates to: SSASTAPVTLPTRVPRGESKEYL*VLGMSM
Trigger: CATGGACATGCCTAACACCAACAAGTACTCCTTTGA...CTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCAGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp TGCAGTGTGAGGTCAGCAACCAGGTCGAGGGTTGGGGAGGGTCCACGGGGAGGTTCAAAGGAGTACTTGTaGGTGTTAGGCATGTCCATG +
Preference number: 5 (lower is better)
Translates to: CSVRSATRSRVGEGPRGGSKEYL*VLGMSM
Trigger: CATGGACATGCCTAACACCAACAAGTACTCCTTTGA...ACCTCCCCGTGGACCCTCCCCAACCCTCGACCTGGTTGCTGACCTCACACTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGCCATCAAAGGAGTACTaGTTGGTGTTAGGCATGTCC +
Preference number: 5 (lower is better)
Translates to: WEGGGPVWPLSAQPEPSWPSKEY*LVLGMS
Trigger: GGACATGCCTAACACCAACAAGTACTCCTTTGATGG...CCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp CAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTTCCAGCCACACAGGGTaGGCTCCATCAAAGGAGTAC +
Preference number: 5 (lower is better)
Translates to: QQRGMWRKCSETWTGVGCSSHTG*APSKEY
Trigger: GTACTCCTTTGATGGAGCCAACCCTGTGTGGCTGGA...ACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp CCCGCCGGCTCATTCTCATACACGCTTGTGCTGAACTGGGGCTTGGAGAACTGTTCCAGCCACACAGGGTaGGCTCCATCAAAGGAGTAC +
Preference number: 5 (lower is better)
Translates to: PAGSFSYTLVLNWGLENCSSHTG*APSKEY
Trigger: GTACTCCTTTGATGGAGCCAACCCTGTGTGGCTGGA...ACAGTTCTCCAAGCCCCAGTTCAGCACAAGCGTGTATGAGAATGAGCCGGCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp CCGAGGACAACCGCAGCCACTGTGACTACATGGAATCTACCAAGATGTAATGGGGCCCAGATTCCCTGTTaGGCTCAGCCTCCGAGTCGG +
Preference number: 5 (lower is better)
Translates to: PRTTAATVTTWNLPRCNGAQIPC*AQPPSR
Trigger: CCGACTCGGAGGCTGAGCCAAACAGGGAATCTGGGC...CCCATTACATCTTGGTAGATTCCATGTAGTCACAGTGGCTGCGGTTGTCCTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CAA 90 bp AGGACCCAACTAAACACACCCGTGGGCCCCCAGTTTGCAGCTTTGGTATTAGATCTCGCCACAGAAGCCTaGCCCTCCAGGTGCCAAAGC +
Preference number: 5 (lower is better)
Translates to: RTQLNTPVGPQFAALVLDLATEA*PSRCQS
Trigger: GCTTTGGCACCTGGAGGGCAAGGCTTCTGTGGCGAG...ATCTAATACCAAAGCTGCAAACTGGGGGCCCACGGGTGTGTTTAGTTGGGTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS CCA 90 bp ATGTCATTCACATTCACAAGCACCGTGGTGGTAGAGGTGAGGCGGTaGGATAAGATGGGGCACTGGTCTGTGGCAGTGACGATCAGGGTG +
Preference number: 5 (lower is better)
Translates to: MSFTFTSTVVVEVRR*DKMGHWSVAVTIRV
Trigger: CACCCTGATCGTCACTGCCACAGACCAGTGCCCCATCTTATCCCACCGCCTCACCTCTACCACCACGGTGCTTGTGAATGTGAATGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS CCA 90 bp GGCACCAGGCGATCAGTGTCGTCCTTGGCCACAATGCCGACAATGTaGTACTCTAGCTTTGGGTTGAGGTCGTGGTCAATGGCCGTGATA +
Preference number: 5 (lower is better)
Translates to: GTRRSVSSLATMPTM*YSSFGLRSWSMAVI
Trigger: TATCACGGCCATTGACCACGACCTCAACCCAAAGCTAGAGTACCACATTGTCGGCATTGTGGCCAAGGACGACACTGATCGCCTGGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp CCCAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCGTATCAAAGAAGTGGTaGGTGAAGAAGGGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: PSLSSSWDYRYLTPHLAIVSKKW*VKKGSR
Trigger: CCGGCTGCCCTTCTTCACCAACCACTTCTTTGATAC...GATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp AGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAACACCAGGGGGTCATaGTCCATGTCTTGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: SLSSSWDYRYLTPHLAISNTRGS*SMSWAS
Trigger: GCTGGCCCAAGACATGGACAATGACCCCCTGGTGTT...TGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp GATGCTCCCCGTCCCTGCAACCAACAGGTTCAGGAGGTCCCCAGGGAGCCAGTCTCAATAACCAGGATATaGAAGGTCGTGGTGACTGTA +
Preference number: 5 (lower is better)
Translates to: DAPRPCNQQVQEVPREPVSITRI*KVVVTV
Trigger: TACAGTCACCACGACCTTCAATATCCTGGTTATTGA...GACTGGCTCCCTGGGGACCTCCTGAACCTGTTGGTTGCAGGGACGGGGAGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CAA 90 bp GGGCCCAGCCAGTGCTCTCCAGGTGGCCCTGCTCATCTGTACCCTCTGGTCATGTCAATAACCAGGATATaGAAGGTCGTGGTGACTGTA +
Preference number: 5 (lower is better)
Translates to: GPSQCSPGGPAHLYPLVMSITRI*KVVVTV
Trigger: TACAGTCACCACGACCTTCAATATCCTGGTTATTGA...CATGACCAGAGGGTACAGATGAGCAGGGCCACCTGGAGAGCACTGGCTGGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CAA 90 bp GGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTCCGGCCAGCTCCGGGGCATTGTCATaGATGTCAATAACCAGGATA +
Preference number: 5 (lower is better)
Translates to: GMWRKCSETWTGVGCPASSGALS*MSITRI
Trigger: TATCCTGGTTATTGACATCAATGACAATGCCCCGGA...GCTGGCCGGACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp GGGAGTGGGGCTCAGGGCTCCTCCCTAGGAATCATGGGGCCTTACCTCCCTCTATCCGGGGCATTGTCATaGATGTCAATAACCAGGATA +
Preference number: 5 (lower is better)
Translates to: GSGAQGSSLGIMGPYLPLSGALS*MSITRI
Trigger: TATCCTGGTTATTGACATCAATGACAATGCCCCGGA...TAGAGGGAGGTAAGGCCCCATGATTCCTAGGGAGGAGCCCTGAGCCCCACTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CAA 90 bp ATGCGGACAGGCCACCGCCCTCTTGTCTGCATGGCAGATGGGCACAGGGTGGAATCCGGGGCATTGTCATaGATGTCAATAACCAGGATA +
Preference number: 5 (lower is better)
Translates to: MRTGHRPLVCMADGHRVESGALS*MSITRI
Trigger: TATCCTGGTTATTGACATCAATGACAATGCCCCGGA...TTCCACCCTGTGCCCATCTGCCATGCAGACAAGAGGGCGGTGGCCTGTCCGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp CAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCCTGTACTCGGAGCTGTaGAACTCCGGGGCATTGTCA +
Preference number: 5 (lower is better)
Translates to: QPLKQLGLQVPNTTLGHLLYSEL*NSGALS
Trigger: TGACAATGCCCCGGAGTTCAACAGCTCCGAGTACAG...GAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp AGGCACCACCAGAGGCTAAAGCCCAACAGTAGAGCCCTGACCTCTTTTCCACCCATGAAGTGGTGGGAGTaGTTCCCCACCAAGTACACC +
Preference number: 5 (lower is better)
Translates to: RHHQRLKPNSRALTSFPPMKWWE*FPTKYT
Trigger: GGTGTACTTGGTGGGGAACAACTCCCACCACTTCAT...GGGTGGAAAAGAGGTCAGGGCTCTACTGTTGGGCTTTAGCCTCTGGTGGTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CAA 90 bp CCCAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCCTGCATCATTGTCAGTaGCCAGGACTGTCAGCACAG +
Preference number: 5 (lower is better)
Translates to: PSLSSSWDYRYLTPHLAILHHCQ*PGLSAQ
Trigger: CTGTGCTGACAGTCCTGGCAACTGACAATGATGCAG...GATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp AGGCACCACCAGAGGCTAAAGCCCAACAGTAGAGCCCTGACCTCTTTTCCACCCAAGGTGCCTGCATCATaGTCAGTTGCCAGGACTGTC +
Preference number: 5 (lower is better)
Translates to: RHHQRLKPNSRALTSFPPKVPAS*SVARTV
Trigger: GACAGTCCTGGCAACTGACAATGATGCAGGCACCTT...GGGTGGAAAAGAGGTCAGGGCTCTACTGTTGGGCTTTAGCCTCTGGTGGTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CAA 90 bp TGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCACCTGGACTCCCCTGAGCGGGCATaGATCCGAAACTGGGTGGAG +
Preference number: 5 (lower is better)
Translates to: CSLTLTFLSTWGCHLHLDSPERA*IRNWVE
Trigger: CTCCACCCAGTTTCGGATCAATGCCCGCTCAGGGGA...GTCCAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp TGTCCACAAACATGCCCCCACATCCCCCTAGGTCTACCTGTAGATCCTCCTGCTACAGAGACGACGATTTaGCGCATCAGCTCGGCCTCA +
Preference number: 5 (lower is better)
Translates to: CPQTCPHIPLGLPVDPPATETTI*RISSAS
Trigger: TGAGGCCGAGCTGATGCGCAAAATCGTCGTCTCTGT...AGCAGGAGGATCTACAGGTAGACCTAGGGGGATGTGGGGGCATGTTTGTGGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp AGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTGTCGATGGCCACCACTaGGTAGATGGAGACCCCCGC +
Preference number: 5 (lower is better)
Translates to: SSWDYRYLTPHLAISRTFVDGHH*VDGDPR
Trigger: GCGGGGGTCTCCATCTACCAAGTGGTGGCCATCGAC...AAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp CAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCTCGGACACAGACACATaGTACACGGCCGGGAAGAAG +
Preference number: 5 (lower is better)
Translates to: QPLKQLGLQVPNTTLGHLSDTDT*YTAGKK
Trigger: CTTCTTCCCGGCCGTGTACAATGTGTCTGTGTCCGA...GAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp CTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACGGGGGCCTCATCGTaGATGTCCTCCACGTACACA +
Preference number: 5 (lower is better)
Translates to: LSSSWDYRYLTPHLAISRTGASS*MSSTYT
Trigger: TGTGTACGTGGAGGACATCAACGATGAGGCCCCCGT...CCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp CCAGCTGCGATTGCTGGAGGCCTTGACGATGAAGGAGAAGATGGCTTCTCGCTCGGTAGGTCGCTGGCATaGTCAATCACTGAGAGAGTG +
Preference number: 5 (lower is better)
Translates to: PAAIAGGLDDEGEDGFSLGRSLA*SITERV
Trigger: CACTCTCTCAGTGATTGACAATGCCAGCGACCTACC...GAGCGAGAAGCCATCTTCTCCTTCATCGTCAAGGCCTCCAGCAATCGCAGCTGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp ACGGTCGGGGATCTCGTTAATGACGATCTTGACGCGCTGGTCGTCCCTCAGGATTGGGGCGTATTGTCATaGACGTCCAGGACGTTGACA +
Preference number: 5 (lower is better)
Translates to: TVGDLVNDDLDALVVPQDWGVLS*TSRTLT
Trigger: TGTCAACGTCCTGGACGTCAATGACAATACGCCCCA...ATCCTGAGGGACGACCAGCGCGTCAAGATCGTCATTAACGAGATCCCCGACCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp CTGATGTGGAGGATGGTGCCGTTGGGTGGGCGCACAAAGACAGGGCGGTTGTCAATGGGGTTGTTGTCATaGATGTCCACGATTTCCAGG +
Preference number: 5 (lower is better)
Translates to: LMWRMVPLGGRTKTGRLSMGLLS*MSTISR
Trigger: CCTGGAAATCGTGGACATCAATGACAACAACCCCAT...TGACAACCGCCCTGTCTTTGTGCGCCCACCCAACGGCACCATCCTCCACATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp CTCGTAGTCCACTGTCCGGTTGGCAATGACCTTCCCTGCCGAGGAGTCCTCCAGTCAATGAGTGCAAAGTaGCCTGAGTCAGCATCAGTG +
Preference number: 5 (lower is better)
Translates to: LVVHCPVGNDLPCRGVLQSMSAK*PESASV
Trigger: CACTGATGCTGACTCAGGCAACTTTGCACTCATTGA...CTGGAGGACTCCTCGGCAGGGAAGGTCATTGCCAACCGGACAGTGGACTACGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp GATTGGCCCCTCACGAATGATCTGGCCCAGCTTGGCAATGTTGTCATACTCCTGGCTACATCCCCAGGGTaGTCTTTGGCCAAGGCAGTC +
Preference number: 5 (lower is better)
Translates to: DWPLTNDLAQLGNVVILLATSPG*SLAKAV
Trigger: GACTGCCTTGGCCAAAGACAACCCTGGGGATGTAGC...CAGGAGTATGACAACATTGCCAAGCTGGGCCAGATCATTCGTGAGGGGCCAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp AGATCTTATGAAGGTAGAGGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGAACTGCGCCTGTCACGTaGCCCACGAGGGTGCCGCGT +
Preference number: 5 (lower is better)
Translates to: RSYEGRGQMLNERLAKVGTAPVT*PTRVPR
Trigger: ACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAGT...TCCCACTTTTGCCAGACGCTCATTCAGCATCTGACCTCTACCTTCATAAGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp TGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCACCTGGACGCAGTGTACTCAGCCTaGGTGAAGCGTGGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: CSLTLTFLSTWGCHLHLDAVYSA*VKRGGW
Trigger: CCAGCCACCACGCTTCACCAAGGCTGAGTACACTGC...GTCCAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp GGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGATCTGAGCAGCTGATGCGGATGGCCCCAGTGATGTaGGAGAGCAGGTGGATGAAC +
Preference number: 5 (lower is better)
Translates to: GQMLNERLAKVGSEQLMRMAPVM*ESRWMN
Trigger: GTTCATCCACCTGCTCTCCAACATCACTGGGGCCAT...CCGCATCAGCTGCTCAGATCCCACTTTTGCCAGACGCTCATTCAGCATCTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp GGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTCCGGCCAGCACATGGAACTGCACATaGTCAGTATTGACAATGGCC +
Preference number: 5 (lower is better)
Translates to: GMWRKCSETWTGVGCPASTWNCT*SVLTMA
Trigger: GGCCATTGTCAATACTGACAATGTGCAGTTCCATGT...GCTGGCCGGACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp GGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGATCTGAGCAGCTGATGCGGTTCACCCGGCCCTTCTaGTCCACATGGAACTGCACA +
Preference number: 5 (lower is better)
Translates to: GQMLNERLAKVGSEQLMRFTRPF*STWNCT
Trigger: TGTGCAGTTCCATGTGGACAAGAAGGGCCGGGTGAA...CCGCATCAGCTGCTCAGATCCCACTTTTGCCAGACGCTCATTCAGCATCTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp GCAATGTTGTCATACTCCTGGATGGCAGCCCGCAGGTATCGGTCATCATCAGGCTTCACCCGGCCCTTCTaGTCCACATGGAACTGCACA +
Preference number: 5 (lower is better)
Translates to: AMLSYSWMAARRYRSSSGFTRPF*STWNCT
Trigger: TGTGCAGTTCCATGTGGACAAGAAGGGCCGGGTGAA...GCCTGATGATGACCGATACCTGCGGGCTGCCATCCAGGAGTATGACAACATTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp CCTGGGCTGTGGTCTCCTGGCTCCTCGTCCAGCTCAGTCTGTATCAGCTTGATTCCAGCCACAATGGCCTaGAGCTTCCTCTTGTGTACA +
Preference number: 5 (lower is better)
Translates to: PGLWSPGSSSSSVCISLIPATMA*SFLLCT
Trigger: TGTACACAAGAGGAAGCTCAAGGCCATTGTGGCTGG...AATCAAGCTGATACAGACTGAGCTGGACGAGGAGCCAGGAGACCACAGCCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647092.1
CDS-3UTR CAA 90 bp GGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTCCGGCCAGCTCAAAGGAGTACTTGTaGGTGTTAGGCATGTCCATG +
Preference number: 5 (lower is better)
Translates to: GMWRKCSETWTGVGCPASSKEYL*VLGMSM
Trigger: CATGGACATGCCTAACACCAACAAGTACTCCTTTGA...GCTGGCCGGACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp TTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCCATCAAAGGAGTACTaGTTGGTGTTAGGCATGTCC +
Preference number: 5 (lower is better)
Translates to: FGLFQLSLSQAGPQTLGPPSKEY*LVLGMS
Trigger: GGACATGCCTAACACCAACAAGTACTCCTTTGATGG...GGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp CAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTCCCAGCTTGGCAATGTaGTCATACTCCTGGATGGCA +
Preference number: 5 (lower is better)
Translates to: QQRGMWRKCSETWTGVGCPSLAM*SYSWMA
Trigger: TGCCATCCAGGAGTATGACAACATTGCCAAGCTGGG...ACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp TGGACGTCCAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGATCACGTCGCGAAGTTaGTGCAGGGGTGTGGATTTG +
Preference number: 5 (lower is better)
Translates to: WTSSREGCGGNVARLGLEITSRS*CRGVDL
Trigger: CAAATCCACACCCCTGCACAAACTTCGCGACGTGAT...CTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTGGACGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp ACGGTCGGGGATCTCGTTAATGACGATCTTGACGCGCTGGTCGTCCCTCAGGATATCACGTCGCGAAGTTaGTGCAGGGGTGTGGATTTG +
Preference number: 5 (lower is better)
Translates to: TVGDLVNDDLDALVVPQDITSRS*CRGVDL
Trigger: CAAATCCACACCCCTGCACAAACTTCGCGACGTGAT...ATCCTGAGGGACGACCAGCGCGTCAAGATCGTCATTAACGAGATCCCCGACCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp AGAAGGAAAAGTCCAGGAGGGGGAGGGCTCTCAATTGGGTTTCAGGCACCAGGCTCTGAGGCAGGAGTCTaGGTGGAAGCTGGCATAACA +
Preference number: 5 (lower is better)
Translates to: RRKSPGGGGLSIGFQAPGSEAGV*VEAGIT
Trigger: TGTTATGCCAGCTTCCACCAAGACTCCTGCCTCAGA...GCCTGGTGCCTGAAACCCAATTGAGAGCCCTCCCCCTCCTGGACTTTTCCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CAA 90 bp CATCCACATTCCCTAGGTAAGTCTTCCCTATACCCGCTGCCCTGGGTCCAGCTGCCCAGCATGGAGAAGTaGCCAAATGGCAAAGGTTCC +
Preference number: 5 (lower is better)
Translates to: HPHSLGKSSLYPLPWVQLPSMEK*PNGKGS
Trigger: GGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGG...CAGCTGGACCCAGGGCAGCGGGTATAGGGAAGACTTACCTAGGGAATGTGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp GCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTTAGTCAAGCTCGCCACAGAAGCCTaGCCCTCCAGGTGCCAAAGC +
Preference number: 5 (lower is better)
Translates to: AKAQHGEVAKWQRFPLVKLATEA*PSRCQS
Trigger: GCTTTGGCACCTGGAGGGCAAGGCTTCTGTGGCGAG...CTTGACTAAAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS TCA 90 bp CCCGCCGGGATGCCTTCAAGCACCTCGGCCACAAAAGGCAGGTTCTaGAAGGTGGGGTCATTGTCATTGAGATCCAAGAGGTTCACAAAC +
Preference number: 5 (lower is better)
Translates to: PAGMPSSTSATKGRF*KVGSLSLRSKRFTN
Trigger: GTTTGTGAACCTCTTGGATCTCAATGACAATGACCCCACCTTTCAGAACCTGCCTTTTGTGGCCGAGGTGCTTGAAGGCATCCCGGCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000442677.4
ENST00000466757.8
ENST00000616684.4
CDS CCA 90 bp GACAGAACACTGTTGATCCCGATGTCACGGTCAGTGGCTCTCACCTaGACCACAGCAGTACCTCCACCCACGTTCTCATTCACACTGACA +
Preference number: 5 (lower is better)
Translates to: DRTLLIPMSRSVALT*TTAVPPPTFSFTLT
Trigger: TGTCAGTGTGAATGAGAACGTGGGTGGAGGTACTGCTGTGGTCCAGGTGAGAGCCACTGACCGTGACATCGGGATCAACAGTGTTCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224721.12
ENST00000398792.3
CDS CCA 90 bp GCCACAATGCCGACAATGTGGTACTCTAGCTTTGGGTTGAGGTCGTaGTCAATGGCCGTGATATTGGCAATGACAGTGCCTGGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: ATMPTMWYSSFGLRS*SMAVILAMTVPGSA
Trigger: GGCTGAGCCAGGCACTGTCATTGCCAATATCACGGCCATTGACCACGACCTCAACCCAAAGCTAGAGTACCACATTGTCGGCATTGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS CCA 90 bp ACCATTACAGATCCTGTGTTGATATTCACAGCAAAGGCGTCCTCCTaGTTGGGCACCAGGCGATCAGTGTCGTCCTTGGCCACAATGCCG +
Preference number: 5 (lower is better)
Translates to: TITDPVLIFTAKASS*LGTRRSVSSLATMP
Trigger: CGGCATTGTGGCCAAGGACGACACTGATCGCCTGGTGCCCAACCAGGAGGACGCCTTTGCTGTGAATATCAACACAGGATCTGTAATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp CTGCCTTTGAGCTTCTGTCTTGTTGCTGTTGCAGGAGCCATGAGCACAGAGGGCGTATCAAAGAAGTGGTaGGTGAAGAAGGGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: LPLSFCLVAVAGAMSTEGVSKKW*VKKGSR
Trigger: CCGGCTGCCCTTCTTCACCAACCACTTCTTTGATAC...GCCCTCTGTGCTCATGGCTCCTGCAACAGCAACAAGACAGAAGCTCAAAGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CAA 90 bp CAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCGTATCAAAGAAGTGGTaGGTGAAGAAGGGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: QPLKQLGLQVPNTTLGHLVSKKW*VKKGSR
Trigger: CCGGCTGCCCTTCTTCACCAACCACTTCTTTGATAC...GAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp TTCTCAACAGGTCCCCAAGGAAGGATGAGGCCACATTCCTCCAAGTCACTGCTCACGGTGAACTCTGACTaGGTCTCTCTGTCCAGTGGC +
Preference number: 5 (lower is better)
Translates to: FSTGPQGRMRPHSSKSLLTVNSD*VSLSSG
Trigger: GCCACTGGACAGAGAGACCAAGTCAGAGTTCACCGT...GAGCAGTGACTTGGAGGAATGTGGCCTCATCCTTCCTTGGGGACCTGTTGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CAA 90 bp AGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAACGGTGAACTCTGACTaGGTCTCTCTGTCCAGTGGC +
Preference number: 5 (lower is better)
Translates to: SLSSSWDYRYLTPHLAISTVNSD*VSLSSG
Trigger: GCCACTGGACAGAGAGACCAAGTCAGAGTTCACCGT...TGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp CTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGCTGTACTCGGAGCTGTaGAACTCCGGGGCATTGTCA +
Preference number: 5 (lower is better)
Translates to: LSSSWDYRYLTPHLAISRLYSEL*NSGALS
Trigger: TGACAATGCCCCGGAGTTCAACAGCTCCGAGTACAG...CCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp CCCAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCCCCAAATTCTCATCCTaGTCCACCACCTGGATGAAG +
Preference number: 5 (lower is better)
Translates to: PSLSSSWDYRYLTPHLAIPKFSS*STTWMK
Trigger: CTTCATCCAGGTGGTGGACAAGGATGAGAATTTGGG...GATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp CAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCTCGTACAGGCTGATGTaGTACAGTGGCTGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: QPLKQLGLQVPNTTLGHLSYRLM*YSGWLK
Trigger: CTTCAGCCAGCCACTGTACAACATCAGCCTGTACGA...GAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp TGTCCACAAACATGCCCCCACATCCCCCTAGGTCTACCTGTAGATCCTCCTGCTCTGCATCATTGTCAGTaGCCAGGACTGTCAGCACAG +
Preference number: 5 (lower is better)
Translates to: CPQTCPHIPLGLPVDPPALHHCQ*PGLSAQ
Trigger: CTGTGCTGACAGTCCTGGCAACTGACAATGATGCAG...AGCAGGAGGATCTACAGGTAGACCTAGGGGGATGTGGGGGCATGTTTGTGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp CAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTGTGGGCACGTTGTCGTaGACATCCAACACATTGATC +
Preference number: 5 (lower is better)
Translates to: QQRGMWRKCSETWTGVGCVGTLS*TSNTLI
Trigger: GATCAATGTGTTGGATGTCAACGACAACGTGCCCAC...ACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp CCCAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCGTGGGCACGTTGTCGTaGACATCCAACACATTGATC +
Preference number: 5 (lower is better)
Translates to: PSLSSSWDYRYLTPHLAIVGTLS*TSNTLI
Trigger: GATCAATGTGTTGGATGTCAACGACAACGTGCCCAC...GATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp AGGTGGGAATTCTCAACAGGTCCCCAAGGAAGGATGAGGCCACATTCCTCCAAGGTGGGGTGGTTGTCATaGATGTCCAGGAGGGTGATG +
Preference number: 5 (lower is better)
Translates to: RWEFSTGPQGRMRPHSSKVGWLS*MSRRVM
Trigger: CATCACCCTCCTGGACATCAATGACAACCACCCCAC...CTTGGAGGAATGTGGCCTCATCCTTCCTTGGGGACCTGTTGAGAATTCCCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CAA 90 bp GAATGCTTGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCATGGGTGGTGCGGATCTaGCCCGTGGTGCTGTTGAGG +
Preference number: 5 (lower is better)
Translates to: ECLFIDIDFLVHVGMPPPWVVRI*PVVLLR
Trigger: CCTCAACAGCACCACGGGCAAGATCCGCACCACCCA...TGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACAAGCATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp CAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGGGTGGTGCGGATCTaGCCCGTGGTGCTGTTGAGG +
Preference number: 5 (lower is better)
Translates to: QLGLQVPNTTLGHLKDILWVVRI*PVVLLR
Trigger: CCTCAACAGCACCACGGGCAAGATCCGCACCACCCA...TAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp CTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACAGAGACGACGATTTaGCGCATCAGCTCGGCCTCA +
Preference number: 5 (lower is better)
Translates to: LSSSWDYRYLTPHLAISRTETTI*RISSAS
Trigger: TGAGGCCGAGCTGATGCGCAAAATCGTCGTCTCTGT...CCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp CAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTAGTGCTGGTGGAGCTCTaGGTGGGCGTGCCTGCATCA +
Preference number: 5 (lower is better)
Translates to: QLGLQVPNTTLGHLKDILVLVEL*VGVPAS
Trigger: TGATGCAGGCACGCCCACCAAGAGCTCCACCAGCAC...TAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp CTCCAGGTGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTTCGGACACAGACACATaGTACACGGCCGGGAAGAAG +
Preference number: 5 (lower is better)
Translates to: LQVPKPSMEKLPNGKGSLSDTDT*YTAGKK
Trigger: CTTCTTCCCGGCCGTGTACAATGTGTCTGTGTCCGA...AAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCACCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp GGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGATCTGAGCAGCTGATGCGGTCAATGGCCGTGATATaGGCAATGACAGTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: GQMLNERLAKVGSEQLMRSMAVI*AMTVPG
Trigger: GCCAGGCACTGTCATTGCCAATATCACGGCCATTGA...CCGCATCAGCTGCTCAGATCCCACTTTTGCCAGACGCTCATTCAGCATCTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp CTCATACACGCTTGTGCTGAACTGGGGCTTGGAGAACTGTGGCCGGCAGTCATTTGGGGCGTATTGTCATaGACGTCCAGGACGTTGACA +
Preference number: 5 (lower is better)
Translates to: LIHACAELGLGELWPAVIWGVLS*TSRTLT
Trigger: TGTCAACGTCCTGGACGTCAATGACAATACGCCCCA...AATGACTGCCGGCCACAGTTCTCCAAGCCCCAGTTCAGCACAAGCGTGTATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp GAGAGTGACCTCATAGGTGGCAACCAGCTCCCGATTCATGGGGGACTTCACCATACGAAAAGGGGTTCGTaGTCATCGATGTCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: ESDLIGGNQLPIHGGLHHTKRGS*SSMSSR
Trigger: CCTGGAGGACATCGATGACAACGAACCCCTTTTCGT...ATGGTGAAGTCCCCCATGAATCGGGAGCTGGTTGCCACCTATGAGGTCACTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp AACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAAACTCTGAGCCCACCTaGGCGTCGGTGGCCACCCCT +
Preference number: 5 (lower is better)
Translates to: NRREHQSLLFISWAHIWENSEPT*ASVATP
Trigger: AGGGGTGGCCACCGACGCCAAGGTGGGCTCAGAGTT...TTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp AGATCTTATGAAGGTAGAGGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGAAACTCTGAGCCCACCTaGGCGTCGGTGGCCACCCCT +
Preference number: 5 (lower is better)
Translates to: RSYEGRGQMLNERLAKVGNSEPT*ASVATP
Trigger: AGGGGTGGCCACCGACGCCAAGGTGGGCTCAGAGTT...TCCCACTTTTGCCAGACGCTCATTCAGCATCTGACCTCTACCTTCATAAGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp AGCACTTGGATCACCACCTGCACTGAATTTTCGCGACGGTTGCTGGCTACATCCTTCACCCGGCCCTTCTaGTCCACATGGAACTGCACA +
Preference number: 5 (lower is better)
Translates to: STWITTCTEFSRRLLATSFTRPF*STWNCT
Trigger: TGTGCAGTTCCATGTGGACAAGAAGGGCCGGGTGAA...GGATGTAGCCAGCAACCGTCGCGAAAATTCAGTGCAGGTGGTGATCCAAGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp TTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCGCTTGTTCATTGACATaGACTTTCTTGTCCACGTGG +
Preference number: 5 (lower is better)
Translates to: FGLFQLSLSQAGPQTLGPACSLT*TFLSTW
Trigger: CCACGTGGACAAGAAAGTCAATGTCAATGAACAAGC...GGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGGAGAATGCTTGTTCATaGACATTGACTTTCTTGTCC +
Preference number: 5 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQENACS*TLTFLS
Trigger: GGACAAGAAAGTCAATGTCAATGAACAAGCATTCTC...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp AGGATGGGCTTCTCAGAATCCCAAACCCTTGACCTCTCCTCACAACGCGAGGGTCCCAGCATGGAGAAGTaGCCAAATGGCAAAGGTTCC +
Preference number: 5 (lower is better)
Translates to: RMGFSESQTLDLSSQREGPSMEK*PNGKGS
Trigger: GGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGG...ACCCTCGCGTTGTGAGGAGAGGTCAAGGGTTTGGGATTCTGAGAAGCCCATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CAA 90 bp AGAAGGAAAAGTCCAGGAGGGGGAGGGCTCTCAATTGGGTTTCAGGCACCAGGCCCAGCTGATCTGCCTTaGAGCTTCTGTCTTGTTGCT +
Preference number: 5 (lower is better)
Translates to: RRKSPGGGGLSIGFQAPGPADLP*SFCLVA
Trigger: AGCAACAAGACAGAAGCTCAAAGGCAGATCAGCTGG...GCCTGGTGCCTGAAACCCAATTGAGAGCCCTCCCCCTCCTGGACTTTTCCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CAA 90 bp AAAAACATGGCAAGGACCCAACTAAACACACCCGTGGGCCCCCAGTTTGCAGCTGGGTTTCCAGCCCCCTaGTCAACTCCTTGTGGGTTT +
Preference number: 5 (lower is better)
Translates to: KNMARTQLNTPVGPQFAAGFPAP*STPCGF
Trigger: AAACCCACAAGGAGTTGACAAGGGGGCTGGAAACCC...AGCTGCAAACTGGGGGCCCACGGGTGTGTTTAGTTGGGTCCTTGCCATGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CAA 90 bp ACAGATCCCTGGGCCGCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTACTCTCGCTTTGTCACAGCCATGTaGATTCTTCTATCATTCCTC +
Preference number: 5 (lower is better)
Translates to: TDPWAASSSSSSSSSYSRFVTAM*ILLSFL
Trigger: GAGGAATGATAGAAGAATCAACATGGCTGTGACAAA...GCGAGAGTAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGCGGCCCAGGGATCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642965.1
CDS GCA 90 bp ATAGCCCTCGTACAGGCTGATGTCGAAGTAGCTGCCAAAGGCAGATaGACTGACAATGCTGTAGGTGATCTGGTTGTTGGGAGGGGAGTC +
Preference number: 5 (lower is better)
Translates to: IALVQADVEVAAKGR*TDNAVGDLVVGRGV
Trigger: GACTCCCCTCCCAACAACCAGATCACCTACAGCATTGTCAGTGCATCTGCCTTTGGCAGCTACTTCGACATCAGCCTGTACGAGGGCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000442677.4
ENST00000466757.8
ENST00000616684.4
CDS CCA 90 bp GTCAATAACCAGGATATTGAAGGTCGTGGTGACTGTAGCGTCAGATaGGGTGCGGTCATCGTTCAGCTCCGTGCCCTTCACAGTCAGGAT +
Preference number: 5 (lower is better)
Translates to: VNNQDIEGRGDCSVR*GAVIVQLRALHSQD
Trigger: ATCCTGACTGTGAAGGGCACGGAGCTGAACGATGACCGCACCCCATCTGACGCTACAGTCACCACGACCTTCAATATCCTGGTTATTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000442677.4
ENST00000461841.7
ENST00000466757.8
ENST00000616684.4
ENST00000643732.1
ENST00000646131.1
CDS-3UTR CAA 90 bp CGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCATCTAACACCAGGGGGTCATaGTCCATGTCTTGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: RCCLMKDFWSRDVHSWSSNTRGS*SMSWAS
Trigger: GCTGGCCCAAGACATGGACAATGACCCCCTGGTGTT...AGATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CAA 90 bp CCGAGGACAACCGCAGCCACTGTGACTACATGGAATCTACCAAGATGTAATGGGACGGTGAACTCTGACTaGGTCTCTCTGTCCAGTGGC +
Preference number: 5 (lower is better)
Translates to: PRTTAATVTTWNLPRCNGTVNSD*VSLSSG
Trigger: GCCACTGGACAGAGAGACCAAGTCAGAGTTCACCGT...CCCATTACATCTTGGTAGATTCCATGTAGTCACAGTGGCTGCGGTTGTCCTCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CAA 90 bp TCCAGGTGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTTCTGTACTCGGAGCTGTaGAACTCCGGGGCATTGTCA +
Preference number: 5 (lower is better)
Translates to: SRCQSPAWRSCQMAKVPFLYSEL*NSGALS
Trigger: TGACAATGCCCCGGAGTTCAACAGCTCCGAGTACAG...AAAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCACCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp TGTCTTAGAATAGAAGCCCCTTCCCCATTCTCAGACGGTGTAATTCAGGCGGGGCTGTACTCGGAGCTGTaGAACTCCGGGGCATTGTCA +
Preference number: 5 (lower is better)
Translates to: CLRIEAPSPFSDGVIQAGLYSEL*NSGALS
Trigger: TGACAATGCCCCGGAGTTCAACAGCTCCGAGTACAG...CCCCGCCTGAATTACACCGTCTGAGAATGGGGAAGGGGCTTCTATTCTAAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS-3UTR CAA 90 bp CAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCCCCAAATTCTCATCCTaGTCCACCACCTGGATGAAG +
Preference number: 5 (lower is better)
Translates to: QPLKQLGLQVPNTTLGHLPKFSS*STTWMK
Trigger: CTTCATCCAGGTGGTGGACAAGGATGAGAATTTGGG...GAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp AAAAACATGGCAAGGACCCAACTAAACACACCCGTGGGCCCCCAGTTTGCAGCTATGAAGTGGTGGGAGTaGTTCCCCACCAAGTACACC +
Preference number: 5 (lower is better)
Translates to: KNMARTQLNTPVGPQFAAMKWWE*FPTKYT
Trigger: GGTGTACTTGGTGGGGAACAACTCCCACCACTTCAT...AGCTGCAAACTGGGGGCCCACGGGTGTGTTTAGTTGGGTCCTTGCCATGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp AGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAATGAAGTGGTGGGAGTaGTTCCCCACCAAGTACACC +
Preference number: 5 (lower is better)
Translates to: SLSSSWDYRYLTPHLAISMKWWE*FPTKYT
Trigger: GGTGTACTTGGTGGGGAACAACTCCCACCACTTCAT...TGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp AACAGGTCCCCAAGGAAGGATGAGGCCACATTCCTCCAAGTCACTGCTCTGTCACTGCATCATTGTCAGTaGCCAGGACTGTCAGCACAG +
Preference number: 5 (lower is better)
Translates to: NRSPRKDEATFLQVTALSLHHCQ*PGLSAQ
Trigger: CTGTGCTGACAGTCCTGGCAACTGACAATGATGCAG...TGACAGAGCAGTGACTTGGAGGAATGTGGCCTCATCCTTCCTTGGGGACCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CAA 90 bp CTCCAGGTGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTCTGCATCATTGTCAGTaGCCAGGACTGTCAGCACAG +
Preference number: 5 (lower is better)
Translates to: LQVPKPSMEKLPNGKGSLLHHCQ*PGLSAQ
Trigger: CTGTGCTGACAGTCCTGGCAACTGACAATGATGCAG...AAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCACCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp AGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAAGGTGCCTGCATCATaGTCAGTTGCCAGGACTGTC +
Preference number: 5 (lower is better)
Translates to: SLSSSWDYRYLTPHLAISKVPAS*SVARTV
Trigger: GACAGTCCTGGCAACTGACAATGATGCAGGCACCTT...TGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp CAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATCCCCTGAGCGGGCATaGATCCGAAACTGGGTGGAG +
Preference number: 5 (lower is better)
Translates to: QLGLQVPNTTLGHLKDILSPERA*IRNWVE
Trigger: CTCCACCCAGTTTCGGATCAATGCCCGCTCAGGGGA...TAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp TCCAGGTGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTTGTGGGGTGGTTGTCATaGATGTCCAGGAGGGTGATG +
Preference number: 5 (lower is better)
Translates to: SRCQSPAWRSCQMAKVPFVGWLS*MSRRVM
Trigger: CATCACCCTCCTGGACATCAATGACAACCACCCCAC...AAAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCACCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp AGGCACCACCAGAGGCTAAAGCCCAACAGTAGAGCCCTGACCTCTTTTCCACCCGTGGGGTCATTGTCATaGAGATCCAAGAGGTTCACA +
Preference number: 5 (lower is better)
Translates to: RHHQRLKPNSRALTSFPPVGSLS*RSKRFT
Trigger: TGTGAACCTCTTGGATCTCAATGACAATGACCCCAC...GGGTGGAAAAGAGGTCAGGGCTCTACTGTTGGGCTTTAGCCTCTGGTGGTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CAA 90 bp AGATCTTATGAAGGTAGAGGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGAGTGCTGGTGGAGCTCTaGGTGGGCGTGCCTGCATCA +
Preference number: 5 (lower is better)
Translates to: RSYEGRGQMLNERLAKVGVLVEL*VGVPAS
Trigger: TGATGCAGGCACGCCCACCAAGAGCTCCACCAGCAC...TCCCACTTTTGCCAGACGCTCATTCAGCATCTGACCTCTACCTTCATAAGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp AGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGTGCTGGTGGAGCTCTaGGTGGGCGTGCCTGCATCA +
Preference number: 5 (lower is better)
Translates to: SWDYRYLTPHLAISRTFYVLVEL*VGVPAS
Trigger: TGATGCAGGCACGCCCACCAAGAGCTCCACCAGCAC...ATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp CAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTGGGAAGGTAGGCACATaGTCGTTGATGTCATTCACA +
Preference number: 5 (lower is better)
Translates to: QQRGMWRKCSETWTGVGCGKVGT*SLMSFT
Trigger: TGTGAATGACATCAACGACAATGTGCCTACCTTCCC...ACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp TGGACGTCCAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGATGGGGTTGTTGTCATaGATGTCCACGATTTCCAGG +
Preference number: 5 (lower is better)
Translates to: WTSSREGCGGNVARLGLEMGLLS*MSTISR
Trigger: CCTGGAAATCGTGGACATCAATGACAACAACCCCAT...CTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTGGACGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp AGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGCCAGTATGATGGCCGTGTCGTaGTGGCCTGCCAGGTCTCGG +
Preference number: 5 (lower is better)
Translates to: REHQSLLFISWAHIWEASMMAVS*WPARSR
Trigger: CCGAGACCTGGCAGGCCACAACGACACGGCCATCAT...ACTGGCTTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp GGCCACAATGTCCACCACGAAGTAGCCGGGGCTGTAGGCCATGAAGAGGTCGAAACATGGAACTGCACATaGTCAGTATTGACAATGGCC +
Preference number: 5 (lower is better)
Translates to: GHNVHHEVAGAVGHEEVETWNCT*SVLTMA
Trigger: GGCCATTGTCAATACTGACAATGTGCAGTTCCATGT...TTCGACCTCTTCATGGCCTACAGCCCCGGCTACTTCGTGGTGGACATTGTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp GTAGCTGCTCCTTGTTCTCATCGATCATCTGGATCACCCGGTCCACGTCCAGGAATGATCTGGCCCAGCTaGGCAATGTTGTCATACTCC +
Preference number: 5 (lower is better)
Translates to: VAAPCSHRSSGSPGPRPGMIWPS*AMLSYS
Trigger: GGAGTATGACAACATTGCCAAGCTGGGCCAGATCAT...TCCTGGACGTGGACCGGGTGATCCAGATGATCGATGAGAACAAGGAGCAGCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp AGGACCCAACTAAACACACCCGTGGGCCCCCAGTTTGCAGCTTTGGTATTAGATTCCAAGCAGGCTCTATaGGAGAAGCCCACTGTCCCT +
Preference number: 5 (lower is better)
Translates to: RTQLNTPVGPQFAALVLDSKQAL*EKPTVP
Trigger: AGGGACAGTGGGCTTCTCCAATAGAGCCTGCTTGGA...ATCTAATACCAAAGCTGCAAACTGGGGGCCCACGGGTGTGTTTAGTTGGGTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CAA 90 bp CTGCGGCCTCTTACCATCCATAACTCGTTCCTGGCCACAGAGCAAGTTATTGACCCCCCTCGCTGCTGCTaGATGAAAGACTTCTGGTCA +
Preference number: 5 (lower is better)
Translates to: LRPLTIHNSFLATEQVIDPPRCC*MKDFWS
Trigger: TGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGG...GTCAATAACTTGCTCTGTGGCCAGGAACGAGTTATGGATGGTAAGAGGCCGCAG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp CCGAGGACAACCGCAGCCACTGTGACTACATGGAATCTACCAAGATGTAATGGGCCCCCTCGCTGCTGCTaGATGAAAGACTTCTGGTCA +
Preference number: 5 (lower is better)
Translates to: PRTTAATVTTWNLPRCNGPPRCC*MKDFWS
Trigger: TGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGG...CCCATTACATCTTGGTAGATTCCATGTAGTCACAGTGGCTGCGGTTGTCCTCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp TGTCTTAGAATAGAAGCCCCTTCCCCATTCTCAGACGGTGTAATTCAGGCGGGGTTCAGGCCCTCATCCTaGTCCACCACCTGGATGAAG +
Preference number: 5 (lower is better)
Translates to: CLRIEAPSPFSDGVIQAGFRPSS*STTWMK
Trigger: CTTCATCCAGGTGGTGGACAAGGATGAGGGCCTGAA...CCCCGCCTGAATTACACCGTCTGAGAATGGGGAAGGGGCTTCTATTCTAAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000470494.5
CDS-3UTR CAA 90 bp AGGCACCACCAGAGGCTAAAGCCCAACAGTAGAGCCCTGACCTCTTTTCCACCCCTGAAGATGGGCCGGTaGTCATTTTCATTGATGAGA +
Preference number: 5 (lower is better)
Translates to: RHHQRLKPNSRALTSFPPLKMGR*SFSLMR
Trigger: TCTCATCAATGAAAATGACAACCGGCCCATCTTCAG...GGGTGGAAAAGAGGTCAGGGCTCTACTGTTGGGCTTTAGCCTCTGGTGGTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CAA 90 bp CCCAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCCTGAAGATGGGCCGGTaGTCATTTTCATTGATGAGA +
Preference number: 5 (lower is better)
Translates to: PSLSSSWDYRYLTPHLAILKMGR*SFSLMR
Trigger: TCTCATCAATGAAAATGACAACCGGCCCATCTTCAG...GATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp CTGCGGCCTCTTACCATCCATAACTCGTTCCTGGCCACAGAGCAAGTTATTGACAAGGTGCCTGCATCATaGTCAGTTGCCAGGACTGTC +
Preference number: 5 (lower is better)
Translates to: LRPLTIHNSFLATEQVIDKVPAS*SVARTV
Trigger: GACAGTCCTGGCAACTGACAATGATGCAGGCACCTT...GTCAATAACTTGCTCTGTGGCCAGGAACGAGTTATGGATGGTAAGAGGCCGCAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp TCCAGGTGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTTAAGGTGCCTGCATCATaGTCAGTTGCCAGGACTGTC +
Preference number: 5 (lower is better)
Translates to: SRCQSPAWRSCQMAKVPFKVPAS*SVARTV
Trigger: GACAGTCCTGGCAACTGACAATGATGCAGGCACCTT...AAAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCACCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp TGGGAATTCTCAACAGGTCCCCAAGGAAGGATGAGGCCACATTCCTCCAAGTCATTGACATCCAACACATaGATCCTGACCCGGCCTGTG +
Preference number: 5 (lower is better)
Translates to: WEFSTGPQGRMRPHSSKSLTSNT*ILTRPV
Trigger: CACAGGCCGGGTCAGGATCAATGTGTTGGATGTCAA...TGACTTGGAGGAATGTGGCCTCATCCTTCCTTGGGGACCTGTTGAGAATTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CAA 90 bp CCGAGGACAACCGCAGCCACTGTGACTACATGGAATCTACCAAGATGTAATGGGTTGACATCCAACACATaGATCCTGACCCGGCCTGTG +
Preference number: 5 (lower is better)
Translates to: PRTTAATVTTWNLPRCNGLTSNT*ILTRPV
Trigger: CACAGGCCGGGTCAGGATCAATGTGTTGGATGTCAA...CCCATTACATCTTGGTAGATTCCATGTAGTCACAGTGGCTGCGGTTGTCCTCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp TCTGCCTTTGAGCTTCTGTCTTGTTGCTGTTGCAGGAGCCATGAGCACAGAGGGGTGGGCACGTTGTCGTaGACATCCAACACATTGATC +
Preference number: 5 (lower is better)
Translates to: SAFELLSCCCCRSHEHRGVGTLS*TSNTLI
Trigger: GATCAATGTGTTGGATGTCAACGACAACGTGCCCAC...CCCTCTGTGCTCATGGCTCCTGCAACAGCAACAAGACAGAAGCTCAAAGGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp TTCTCAACAGGTCCCCAAGGAAGGATGAGGCCACATTCCTCCAAGTCACTGCTCCTGAAGGTGGGAGGGTaGTCATTCTCATCAAACACC +
Preference number: 5 (lower is better)
Translates to: FSTGPQGRMRPHSSKSLLLKVGG*SFSSNT
Trigger: GGTGTTTGATGAGAATGACAACCCTCCCACCTTCAG...GAGCAGTGACTTGGAGGAATGTGGCCTCATCCTTCCTTGGGGACCTGTTGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CAA 90 bp AGGATGGGCTTCTCAGAATCCCAAACCCTTGACCTCTCCTCACAACGCGAGGGTAGGATGTATTCAGACTaGGTCTCTCGGTCAAGCAGA +
Preference number: 5 (lower is better)
Translates to: RMGFSESQTLDLSSQREGRMYSD*VSRSSR
Trigger: TCTGCTTGACCGAGAGACCAAGTCTGAATACATCCT...ACCCTCGCGTTGTGAGGAGAGGTCAAGGGTTTGGGATTCTGAGAAGCCCATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CAA 90 bp GCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTTAGTCAAGACAGAGACGACGATTTaGCGCATCAGCTCGGCCTCA +
Preference number: 5 (lower is better)
Translates to: AKAQHGEVAKWQRFPLVKTETTI*RISSAS
Trigger: TGAGGCCGAGCTGATGCGCAAAATCGTCGTCTCTGT...CTTGACTAAAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp CAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCGTGGGGTCATTGTCATaGAGATCCAAGAGGTTCACA +
Preference number: 5 (lower is better)
Translates to: QPLKQLGLQVPNTTLGHLVGSLS*RSKRFT
Trigger: TGTGAACCTCTTGGATCTCAATGACAATGACCCCAC...GAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp AAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTCGGACACAGACACATaGTACACGGCCGGGAAGAAG +
Preference number: 5 (lower is better)
Translates to: KQLGLQVPNTTLGHLKDISDTDT*YTAGKK
Trigger: CTTCTTCCCGGCCGTGTACAATGTGTCTGTGTCCGA...AATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp AGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATTTGAGGCCCACGTCGTaGTCCGTGCAGTTCAGCCAG +
Preference number: 5 (lower is better)
Translates to: SWDYRYLTPHLAISRTFYLRPTS*SVQFSQ
Trigger: CTGGCTGAACTGCACGGACAACGACGTGGGCCTCAA...ATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp CAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTAACGGGGGCCTCATCGTaGATGTCCTCCACGTACACA +
Preference number: 5 (lower is better)
Translates to: QLGLQVPNTTLGHLKDILTGASS*MSSTYT
Trigger: TGTGTACGTGGAGGACATCAACGATGAGGCCCCCGT...TAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp CTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGGAAGCGGTACGTGATTaGGTTGAGGTTGTCGATGGA +
Preference number: 5 (lower is better)
Translates to: LSSSWDYRYLTPHLAISREAVRD*VEVVDG
Trigger: TCCATCGACAACCTCAACCAAATCACGTACCGCTTC...CCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp AGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTGTGATGGCGTCTATCTaGAAGAGGGCTTTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: SSWDYRYLTPHLAISRTFVMASI*KRALAW
Trigger: CCAGGCCAAAGCCCTCTTCAAGATAGACGCCATCAC...AAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp AAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAAGACCACCTGCCCATaGCTGCCAGCATCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: KPEGTSVTSVYKLGTHLGKTTCP*LPASGS
Trigger: GGACCCTGATGCTGGCAGCAATGGGCAGGTGGTCTT...TCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp CGACAGAAGGGATCCAGCCACACAGGGTTGGCTCCATCAAAGGAGTACTTGTTGTTGACGTCCAGGACGTaGACAGTCAGCTTGGCATTT +
Preference number: 5 (lower is better)
Translates to: RQKGSSHTGLAPSKEYLLLTSRT*TVSLAF
Trigger: AAATGCCAAGCTGACTGTCAACGTCCTGGACGTCAA...CAACAAGTACTCCTTTGATGGAGCCAACCCTGTGTGGCTGGATCCCTTCTGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp TGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCACCTGGACTGGGGCGTATTGTCATaGACGTCCAGGACGTTGACA +
Preference number: 5 (lower is better)
Translates to: CSLTLTFLSTWGCHLHLDWGVLS*TSRTLT
Trigger: TGTCAACGTCCTGGACGTCAATGACAATACGCCCCA...GTCCAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp AGATCTTATGAAGGTAGAGGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGAGCCCTCACGGTAAAGTaGAGCCAGTGCACCTCCTCG +
Preference number: 5 (lower is better)
Translates to: RSYEGRGQMLNERLAKVGALTVK*SQCTSS
Trigger: CGAGGAGGTGCACTGGCTCAACTTTACCGTGAGGGC...TCCCACTTTTGCCAGACGCTCATTCAGCATCTGACCTCTACCTTCATAAGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp GAATGCTTGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCAGCTACATCCCCAGGGTaGTCTTTGGCCAAGGCAGTC +
Preference number: 5 (lower is better)
Translates to: ECLFIDIDFLVHVGMPPPATSPG*SLAKAV
Trigger: GACTGCCTTGGCCAAAGACAACCCTGGGGATGTAGC...TGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACAAGCATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp TGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCACCTGGACACAAAGACAGGGCGGTaGTCATTGACGTCGATGACC +
Preference number: 5 (lower is better)
Translates to: CSLTLTFLSTWGCHLHLDTKTGR*SLTSMT
Trigger: GGTCATCGACGTCAATGACAACCGCCCTGTCTTTGT...GTCCAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp AGATCTTATGAAGGTAGAGGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGAAACTCCCAGTCCCGGTaGCCCGCAGTCTTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: RSYEGRGQMLNERLAKVGNSQSR*PAVFRK
Trigger: CTTCCTGAAGACTGCGGGCAACCGGGACTGGGAGTT...TCCCACTTTTGCCAGACGCTCATTCAGCATCTGACCTCTACCTTCATAAGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp AACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAACTGGGGGCTGCCTTTaGGAGGCCTCACGAAAAGGG +
Preference number: 5 (lower is better)
Translates to: NRREHQSLLFISWAHIWETGGCL*EASRKG
Trigger: CCCTTTTCGTGAGGCCTCCAAAAGGCAGCCCCCAGT...TTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp AACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGGTGTCCAGCTGCGATaGCTGGAGGCCTTGACGATG +
Preference number: 5 (lower is better)
Translates to: NRREHQSLLFISWAHIWEGVQLR*LEALTM
Trigger: CATCGTCAAGGCCTCCAGCAATCGCAGCTGGACACC...TTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp CAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGGTGTCCAGCTGCGATaGCTGGAGGCCTTGACGATG +
Preference number: 5 (lower is better)
Translates to: QNRREHQSLLFISWAHIWGVQLR*LEALTM
Trigger: CATCGTCAAGGCCTCCAGCAATCGCAGCTGGACACC...CCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp AAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAGCAGTGTACTCAGCCTaGGTGAAGCGTGGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: KPEGTSVTSVYKLGTHLGAVYSA*VKRGGW
Trigger: CCAGCCACCACGCTTCACCAAGGCTGAGTACACTGC...TCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp CGACAGAAGGGATCCAGCCACACAGGGTTGGCTCCATCAAAGGAGTACTTGTTGAAGACAAGGCTGTTGTaGCCAATGTCTGCATCCAGG +
Preference number: 5 (lower is better)
Translates to: RQKGSSHTGLAPSKEYLLKTRLL*PMSASR
Trigger: CCTGGATGCAGACATTGGCAACAACAGCCTTGTCTT...CAACAAGTACTCCTTTGATGGAGCCAACCCTGTGTGGCTGGATCCCTTCTGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp TGGACGTCCAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGACATGGAACTGCACATaGTCAGTATTGACAATGGCC +
Preference number: 5 (lower is better)
Translates to: WTSSREGCGGNVARLGLETWNCT*SVLTMA
Trigger: GGCCATTGTCAATACTGACAATGTGCAGTTCCATGT...CTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTGGACGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp AAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAACGTCCAGGATGCGGTaGGTATCGCGGTTCACCACG +
Preference number: 5 (lower is better)
Translates to: KPEGTSVTSVYKLGTHLGTSRMR*VSRFTT
Trigger: CGTGGTGAACCGCGATACCAACCGCATCCTGGACGT...TCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp AGATCTTATGAAGGTAGAGGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGAACGTCCAGGATGCGGTaGGTATCGCGGTTCACCACG +
Preference number: 5 (lower is better)
Translates to: RSYEGRGQMLNERLAKVGTSRMR*VSRFTT
Trigger: CGTGGTGAACCGCGATACCAACCGCATCCTGGACGT...TCCCACTTTTGCCAGACGCTCATTCAGCATCTGACCTCTACCTTCATAAGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp AACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAACGTCCAGGATGCGGTaGGTATCGCGGTTCACCACG +
Preference number: 5 (lower is better)
Translates to: NRREHQSLLFISWAHIWETSRMR*VSRFTT
Trigger: CGTGGTGAACCGCGATACCAACCGCATCCTGGACGT...TTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp TGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCACCTGGACCCAGCCACAATGGCCTaGAGCTTCCTCTTGTGTACA +
Preference number: 5 (lower is better)
Translates to: CSLTLTFLSTWGCHLHLDPATMA*SFLLCT
Trigger: TGTACACAAGAGGAAGCTCAAGGCCATTGTGGCTGG...GTCCAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp GGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGATCTGAGCAGCTGATGCGGCCATCAAAGGAGTACTaGTTGGTGTTAGGCATGTCC +
Preference number: 5 (lower is better)
Translates to: GQMLNERLAKVGSEQLMRPSKEY*LVLGMS
Trigger: GGACATGCCTAACACCAACAAGTACTCCTTTGATGG...CCGCATCAGCTGCTCAGATCCCACTTTTGCCAGACGCTCATTCAGCATCTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp TGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCACCTGGACCCCAGCTTGGCAATGTaGTCATACTCCTGGATGGCA +
Preference number: 5 (lower is better)
Translates to: CSLTLTFLSTWGCHLHLDPSLAM*SYSWMA
Trigger: TGCCATCCAGGAGTATGACAACATTGCCAAGCTGGG...GTCCAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp GTGGATAAGCAGTTCTGTCTGCGCAAAGTTCACCCGGCCCTTCTTGTCCACATGATGATCTGGCCCAGCTaGGCAATGTTGTCATACTCC +
Preference number: 5 (lower is better)
Translates to: VDKQFCLRKVHPALLVHMMIWPS*AMLSYS
Trigger: GGAGTATGACAACATTGCCAAGCTGGGCCAGATCAT...CATGTGGACAAGAAGGGCCGGGTGAACTTTGCGCAGACAGAACTGCTTATCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp TGGACGTCCAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGGCTTGTTCATTGACATaGACTTTCTTGTCCACGTGG +
Preference number: 5 (lower is better)
Translates to: WTSSREGCGGNVARLGLEACSLT*TFLSTW
Trigger: CCACGTGGACAAGAAAGTCAATGTCAATGAACAAGC...CTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTGGACGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp CTGCGGCCTCTTACCATCCATAACTCGTTCCTGGCCACAGAGCAAGTTATTGACTCCTCCCTAAGGGTTTaGTTCCTTCCTCCCTTCCTG +
Preference number: 5 (lower is better)
Translates to: LRPLTIHNSFLATEQVIDSSLRV*FLPPFL
Trigger: CAGGAAGGGAGGAAGGAACAAAACCCTTAGGGAGGA...GTCAATAACTTGCTCTGTGGCCAGGAACGAGTTATGGATGGTAAGAGGCCGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CAA 90 bp AGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATAACACCAGGGGGTCATaGTCCATGTCTTGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: SWDYRYLTPHLAISRTFYNTRGS*SMSWAS
Trigger: GCTGGCCCAAGACATGGACAATGACCCCCTGGTGTT...ATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp GAATGCTTGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCAACGGTGAACTCTGACTaGGTCTCTCTGTCCAGTGGC +
Preference number: 5 (lower is better)
Translates to: ECLFIDIDFLVHVGMPPPTVNSD*VSLSSG
Trigger: GCCACTGGACAGAGAGACCAAGTCAGAGTTCACCGT...TGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACAAGCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp CCCAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAATAACCAGGATATaGAAGGTCGTGGTGACTGTA +
Preference number: 5 (lower is better)
Translates to: PSLSSSWDYRYLTPHLAISITRI*KVVVTV
Trigger: TACAGTCACCACGACCTTCAATATCCTGGTTATTGA...GATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp AAAAACATGGCAAGGACCCAACTAAACACACCCGTGGGCCCCCAGTTTGCAGCTTCAGGCACACTCTCATaGGCAAAGAGATCAAAGTCG +
Preference number: 5 (lower is better)
Translates to: KNMARTQLNTPVGPQFAASGTLS*AKRSKS
Trigger: CGACTTTGATCTCTTTGCCAATGAGAGTGTGCCTGA...AGCTGCAAACTGGGGGCCCACGGGTGTGTTTAGTTGGGTCCTTGCCATGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp AGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCATCAGGCACACTCTCATaGGCAAAGAGATCAAAGTCG +
Preference number: 5 (lower is better)
Translates to: SLSSSWDYRYLTPHLAISSGTLS*AKRSKS
Trigger: CGACTTTGATCTCTTTGCCAATGAGAGTGTGCCTGA...TGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp AGGATGGGCTTCTCAGAATCCCAAACCCTTGACCTCTCCTCACAACGCGAGGGTCTGAAGATGGGCCGGTaGTCATTTTCATTGATGAGA +
Preference number: 5 (lower is better)
Translates to: RMGFSESQTLDLSSQREGLKMGR*SFSLMR
Trigger: TCTCATCAATGAAAATGACAACCGGCCCATCTTCAG...ACCCTCGCGTTGTGAGGAGAGGTCAAGGGTTTGGGATTCTGAGAAGCCCATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CAA 90 bp CGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCATCTTCGTACAGGCTGATGTaGTACAGTGGCTGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: RCCLMKDFWSRDVHSWSSSYRLM*YSGWLK
Trigger: CTTCAGCCAGCCACTGTACAACATCAGCCTGTACGA...AGATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp TTACCTCCCTCTAGAATGAACCTTGGTAGATGCTCCCCGTCCCTGCAACCAACAGTGGGCACGTTGTCGTaGACATCCAACACATTGATC +
Preference number: 5 (lower is better)
Translates to: LPPSRMNLGRCSPSLQPTVGTLS*TSNTLI
Trigger: GATCAATGTGTTGGATGTCAACGACAACGTGCCCAC...TGTTGGTTGCAGGGACGGGGAGCATCTACCAAGGTTCATTCTAGAGGGAGGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CAA 90 bp TGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCACCTGGACCTGAAGGTGGGAGGGTaGTCATTCTCATCAAACACC +
Preference number: 5 (lower is better)
Translates to: CSLTLTFLSTWGCHLHLDLKVGG*SFSSNT
Trigger: GGTGTTTGATGAGAATGACAACCCTCCCACCTTCAG...GTCCAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp CCGAGGACAACCGCAGCCACTGTGACTACATGGAATCTACCAAGATGTAATGGGCTGAAGGTGGGAGGGTaGTCATTCTCATCAAACACC +
Preference number: 5 (lower is better)
Translates to: PRTTAATVTTWNLPRCNGLKVGG*SFSSNT
Trigger: GGTGTTTGATGAGAATGACAACCCTCCCACCTTCAG...CCCATTACATCTTGGTAGATTCCATGTAGTCACAGTGGCTGCGGTTGTCCTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp CTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGAGGATGTATTCAGACTaGGTCTCTCGGTCAAGCAGA +
Preference number: 5 (lower is better)
Translates to: LSSSWDYRYLTPHLAISRRMYSD*VSRSSR
Trigger: TCTGCTTGACCGAGAGACCAAGTCTGAATACATCCT...CCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp GAATGCTTGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCAGTGGGGTGGTTGTCATaGATGTCCAGGAGGGTGATG +
Preference number: 5 (lower is better)
Translates to: ECLFIDIDFLVHVGMPPPVGWLS*MSRRVM
Trigger: CATCACCCTCCTGGACATCAATGACAACCACCCCAC...TGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACAAGCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp CAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTAGTGGGGTGGTTGTCATaGATGTCCAGGAGGGTGATG +
Preference number: 5 (lower is better)
Translates to: QLGLQVPNTTLGHLKDILVGWLS*MSRRVM
Trigger: CATCACCCTCCTGGACATCAATGACAACCACCCCAC...TAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp CTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGGTGGGGTCATTGTCATaGAGATCCAAGAGGTTCACA +
Preference number: 5 (lower is better)
Translates to: LSSSWDYRYLTPHLAISRVGSLS*RSKRFT
Trigger: TGTGAACCTCTTGGATCTCAATGACAATGACCCCAC...CCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp TACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAGAGGTCGATGGCCACCACTaGGTAGATGGAGACCCCCGC +
Preference number: 5 (lower is better)
Translates to: YRYLTPHLAISRTFYDKEVDGHH*VDGDPR
Trigger: GCGGGGGTCTCCATCTACCAAGTGGTGGCCATCGAC...CTCTTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp TCAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGTTGAGGCCCACGTCGTaGTCCGTGCAGTTCAGCCAG +
Preference number: 5 (lower is better)
Translates to: SKPEGTSVTSVYKLGTHLLRPTS*SVQFSQ
Trigger: CTGGCTGAACTGCACGGACAACGACGTGGGCCTCAA...CAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp ATGAGGATTGATTTGAAAATGCGGACAGGCCACCGCCCTCTTGTCTGCATGGCAAGAAAGATGGGCCGGTaGTCATTCACATCCAGGACA +
Preference number: 5 (lower is better)
Translates to: MRIDLKMRTGHRPLVCMARKMGR*SFTSRT
Trigger: TGTCCTGGATGTGAATGACAACCGGCCCATCTTTCT...TGCCATGCAGACAAGAGGGCGGTGGCCTGTCCGCATTTTCAAATCAATCCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp AAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGATCGATGCGGAAGGTGTaGACGATGTTGCCTGCGACG +
Preference number: 5 (lower is better)
Translates to: KPEGTSVTSVYKLGTHLGSMRKV*TMLPAT
Trigger: CGTCGCAGGCAACATCGTCAACACCTTCCGCATCGA...TCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp AGATCTTATGAAGGTAGAGGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGAACAGGGTCGTTGTCGTaGATGTCCAGCACCCGGATC +
Preference number: 5 (lower is better)
Translates to: RSYEGRGQMLNERLAKVGTGSLS*MSSTRI
Trigger: GATCCGGGTGCTGGACATCAACGACAACGACCCTGT...TCCCACTTTTGCCAGACGCTCATTCAGCATCTGACCTCTACCTTCATAAGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp AAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAGCTACATCCCCAGGGTaGTCTTTGGCCAAGGCAGTC +
Preference number: 5 (lower is better)
Translates to: KPEGTSVTSVYKLGTHLGATSPG*SLAKAV
Trigger: GACTGCCTTGGCCAAAGACAACCCTGGGGATGTAGC...TCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp ACTGAATTTTCGCGACGGTTGCTGGCTACATCCCCAGGGTTGTCTTTGGCCAAGTGCACATTGTCAGTATaGACAATGGCCCCAGTGATG +
Preference number: 5 (lower is better)
Translates to: TEFSRRLLATSPGLSLAKCTLSV*TMAPVM
Trigger: CATCACTGGGGCCATTGTCAATACTGACAATGTGCA...CTTGGCCAAAGACAACCCTGGGGATGTAGCCAGCAACCGTCGCGAAAATTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp GGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGATCTGAGCAGCTGATGCGGACATGGAACTGCACATaGTCAGTATTGACAATGGCC +
Preference number: 5 (lower is better)
Translates to: GQMLNERLAKVGSEQLMRTWNCT*SVLTMA
Trigger: GGCCATTGTCAATACTGACAATGTGCAGTTCCATGT...CCGCATCAGCTGCTCAGATCCCACTTTTGCCAGACGCTCATTCAGCATCTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp TGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCACCTGGACATGATCTGGCCCAGCTaGGCAATGTTGTCATACTCC +
Preference number: 5 (lower is better)
Translates to: CSLTLTFLSTWGCHLHLDMIWPS*AMLSYS
Trigger: GGAGTATGACAACATTGCCAAGCTGGGCCAGATCAT...GTCCAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp CAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCCCAATGTTGGTTAGATaGGAAGAAATGGTGCTCCCT +
Preference number: 5 (lower is better)
Translates to: QPLKQLGLQVPNTTLGHLPMLVR*EEMVLP
Trigger: AGGGAGCACCATTTCTTCCAATCTAACCAACATTGG...GAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp TGTCTTAGAATAGAAGCCCCTTCCCCATTCTCAGACGGTGTAATTCAGGCGGGGGGCAAGACTCTGAGCTaGTGTAGCACACATCTACCA +
Preference number: 5 (lower is better)
Translates to: CLRIEAPSPFSDGVIQAGGKTLS*CSTHLP
Trigger: TGGTAGATGTGTGCTACACAAGCTCAGAGTCTTGCC...CCCCGCCTGAATTACACCGTCTGAGAATGGGGAAGGGGCTTCTATTCTAAGACA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS-3UTR CAA 90 bp AGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCATCCGGGGCATTGTCATaGATGTCAATAACCAGGATA +
Preference number: 5 (lower is better)
Translates to: SLSSSWDYRYLTPHLAISSGALS*MSITRI
Trigger: TATCCTGGTTATTGACATCAATGACAATGCCCCGGA...TGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp CTTAGACTTGTGATGTCTCTGGACCTTGCTGTCTTAACCTGTGATGTGGCCATGATGAAGTGGTGGGAGTaGTTCCCCACCAAGTACACC +
Preference number: 5 (lower is better)
Translates to: LRLVMSLDLAVLTCDVAMMKWWE*FPTKYT
Trigger: GGTGTACTTGGTGGGGAACAACTCCCACCACTTCAT...CATGGCCACATCACAGGTTAAGACAGCAAGGTCCAGAGACATCACAAGTCTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp TGGGAATTCTCAACAGGTCCCCAAGGAAGGATGAGGCCACATTCCTCCAAGTCATCAGGCACACTCTCATaGGCAAAGAGATCAAAGTCG +
Preference number: 5 (lower is better)
Translates to: WEFSTGPQGRMRPHSSKSSGTLS*AKRSKS
Trigger: CGACTTTGATCTCTTTGCCAATGAGAGTGTGCCTGA...TGACTTGGAGGAATGTGGCCTCATCCTTCCTTGGGGACCTGTTGAGAATTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CAA 90 bp TCCAGGTGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTTTCAGGCACACTCTCATaGGCAAAGAGATCAAAGTCG +
Preference number: 5 (lower is better)
Translates to: SRCQSPAWRSCQMAKVPFSGTLS*AKRSKS
Trigger: CGACTTTGATCTCTTTGCCAATGAGAGTGTGCCTGA...AAAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCACCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp CAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATCGTACAGGCTGATGTaGTACAGTGGCTGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: QLGLQVPNTTLGHLKDILSYRLM*YSGWLK
Trigger: CTTCAGCCAGCCACTGTACAACATCAGCCTGTACGA...TAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp CAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTAAAGGTGCCTGCATCATaGTCAGTTGCCAGGACTGTC +
Preference number: 5 (lower is better)
Translates to: QLGLQVPNTTLGHLKDILKVPAS*SVARTV
Trigger: GACAGTCCTGGCAACTGACAATGATGCAGGCACCTT...TAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp AGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTCTGAAGGTGGGAGGGTaGTCATTCTCATCAAACACC +
Preference number: 5 (lower is better)
Translates to: SSWDYRYLTPHLAISRTFLKVGG*SFSSNT
Trigger: GGTGTTTGATGAGAATGACAACCCTCCCACCTTCAG...AAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp TACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAGAGTCCCCTGAGCGGGCATaGATCCGAAACTGGGTGGAG +
Preference number: 5 (lower is better)
Translates to: YRYLTPHLAISRTFYDKESPERA*IRNWVE
Trigger: CTCCACCCAGTTTCGGATCAATGCCCGCTCAGGGGA...CTCTTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp AGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTACATGGATCCGGAAGTaGTTGCCATGGTTACCATGG +
Preference number: 5 (lower is better)
Translates to: SSWDYRYLTPHLAISRTFTWIRK*LPWLPW
Trigger: CCATGGTAACCATGGCAACAACTTCCGGATCCATGT...AAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp TACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAGAGGCCTCGTATGAGGCATaGGAGAACTGCACGGCCTCG +
Preference number: 5 (lower is better)
Translates to: YRYLTPHLAISRTFYDKEASYEA*ENCTAS
Trigger: CGAGGCCGTGCAGTTCTCCAATGCCTCATACGAGGC...CTCTTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp AGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTGAAGCGGTACGTGATTaGGTTGAGGTTGTCGATGGA +
Preference number: 5 (lower is better)
Translates to: SSWDYRYLTPHLAISRTFEAVRD*VEVVDG
Trigger: TCCATCGACAACCTCAACCAAATCACGTACCGCTTC...AAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp TCAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGATCCCTGTCGTGGCATaGATGAAGAAGGCCCGCTCG +
Preference number: 5 (lower is better)
Translates to: SKPEGTSVTSVYKLGTHLIPVVA*MKKARS
Trigger: CGAGCGGGCCTTCTTCATCAATGCCACGACAGGGAT...CAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp AAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGATCACCCGTGGTGGGGTaGATGGCAAACTTGCTCTCT +
Preference number: 5 (lower is better)
Translates to: KPEGTSVTSVYKLGTHLGSPVVG*MANLLS
Trigger: AGAGAGCAAGTTTGCCATCAACCCCACCACGGGTGA...TCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp GAATGCTTGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCAACAAAGACAGGGCGGTaGTCATTGACGTCGATGACC +
Preference number: 5 (lower is better)
Translates to: ECLFIDIDFLVHVGMPPPTKTGR*SLTSMT
Trigger: GGTCATCGACGTCAATGACAACCGCCCTGTCTTTGT...TGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACAAGCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp AGATCTTATGAAGGTAGAGGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGATCGTTAATGACGATCTaGACGCGCTGGTCGTCCCTC +
Preference number: 5 (lower is better)
Translates to: RSYEGRGQMLNERLAKVGSLMTI*TRWSSL
Trigger: GAGGGACGACCAGCGCGTCAAGATCGTCATTAACGA...TCCCACTTTTGCCAGACGCTCATTCAGCATCTGACCTCTACCTTCATAAGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp AGATCTTATGAAGGTAGAGGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGAATGGCCCCAGTGATGTaGGAGAGCAGGTGGATGAAC +
Preference number: 5 (lower is better)
Translates to: RSYEGRGQMLNERLAKVGMAPVM*ESRWMN
Trigger: GTTCATCCACCTGCTCTCCAACATCACTGGGGCCAT...TCCCACTTTTGCCAGACGCTCATTCAGCATCTGACCTCTACCTTCATAAGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp AGATCTTATGAAGGTAGAGGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGATCCAGCCACACAGGGTaGGCTCCATCAAAGGAGTAC +
Preference number: 5 (lower is better)
Translates to: RSYEGRGQMLNERLAKVGSSHTG*APSKEY
Trigger: GTACTCCTTTGATGGAGCCAACCCTGTGTGGCTGGA...TCCCACTTTTGCCAGACGCTCATTCAGCATCTGACCTCTACCTTCATAAGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp TCAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGTTCAGCAGCGAGCCCTaGATTGGCCCCTCACGAATG +
Preference number: 5 (lower is better)
Translates to: SKPEGTSVTSVYKLGTHLFSSEP*IGPSRM
Trigger: CATTCGTGAGGGGCCAATCAAGGGCTCGCTGCTGAA...CAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224721.12
ENST00000398788.4
CDS-3UTR CAA 90 bp GAATGCTTGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCAATCACGTCGCGAAGTTaGTGCAGGGGTGTGGATTTG +
Preference number: 5 (lower is better)
Translates to: ECLFIDIDFLVHVGMPPPITSRS*CRGVDL
Trigger: CAAATCCACACCCCTGCACAAACTTCGCGACGTGAT...TGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACAAGCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp CAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCGGAGCTCAACCAATGTaGGTTAGATTGGAAGAAATG +
Preference number: 5 (lower is better)
Translates to: QPLKQLGLQVPNTTLGHLGAQPM*VRLEEM
Trigger: CATTTCTTCCAATCTAACCAACATTGGTTGAGCTCC...GAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp CTTAGACTTGTGATGTCTCTGGACCTTGCTGTCTTAACCTGTGATGTGGCCATGGGGTGCACACCCAAATaGTTTTCAGGGTCCTCCCTT +
Preference number: 5 (lower is better)
Translates to: LRLVMSLDLAVLTCDVAMGCTPK*FSGSSL
Trigger: AAGGGAGGACCCTGAAAACAATTTGGGTGTGCACCC...CATGGCCACATCACAGGTTAAGACAGCAAGGTCCAGAGACATCACAAGTCTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CAA 90 bp TCCACAAACATGCCCCCACATCCCCCTAGGTCTACCTGTAGATCCTCCTGCTTCAAAAGGAACATTCTCTaGGCAGCATGGGTCCTTTTT +
Preference number: 5 (lower is better)
Translates to: STNMPPHPPRSTCRSSCFKRNIL*AAWVLF
Trigger: AAAAAGGACCCATGCTGCCAAGAGAATGTTCCTTTT...GAAGCAGGAGGATCTACAGGTAGACCTAGGGGGATGTGGGGGCATGTTTGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CAA 90 bp CATAACTCGTTCCTGGCCACAGAGCAAGTTATTGACAGAGTTGGTCTTAAGTTTTCTCCAAGCATGGTCTaGGCAGCCGTCTTGGTGGCC +
Preference number: 5 (lower is better)
Translates to: HNSFLATEQVIDRVGLKFSPSMV*AAVLVA
Trigger: GGCCACCAAGACGGCTGCCAAGACCATGCTTGGAGA...AAACTTAAGACCAACTCTGTCAATAACTTGCTCTGTGGCCAGGAACGAGTTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp AGGACCCAACTAAACACACCCGTGGGCCCCCAGTTTGCAGCTTTGGTATTAGATAAGTTTATTTGGCTTTaGCTGTGTTCTCCCCCACCC +
Preference number: 5 (lower is better)
Translates to: RTQLNTPVGPQFAALVLDKFIWL*LCSPPP
Trigger: GGGTGGGGGAGAACACAGCAAAAGCCAAATAAACTT...ATCTAATACCAAAGCTGCAAACTGGGGGCCCACGGGTGTGTTTAGTTGGGTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CAA 90 bp TGTGTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTAATGATGATGGCCAAGTaGGCCAGGGTGGACAGAGGC +
Preference number: 5 (lower is better)
Translates to: CVAHIYHLDLLSIQSLVLMMMAK*ARVDRG
Trigger: GCCTCTGTCCACCCTGGCCAACTTGGCCATCATCAT...TAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646131.1
CDS-3UTR CAA 90 bp TGTCTTAGAATAGAAGCCCCTTCCCCATTCTCAGACGGTGTAATTCAGGCGGGGTCCGGGGCATTGTCATaGATGTCAATAACCAGGATA +
Preference number: 5 (lower is better)
Translates to: CLRIEAPSPFSDGVIQAGSGALS*MSITRI
Trigger: TATCCTGGTTATTGACATCAATGACAATGCCCCGGA...CCCCGCCTGAATTACACCGTCTGAGAATGGGGAAGGGGCTTCTATTCTAAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000646131.1
CDS-3UTR CAA 90 bp TGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCACCTGGACCTGAAGATGGGCCGGTaGTCATTTTCATTGATGAGA +
Preference number: 5 (lower is better)
Translates to: CSLTLTFLSTWGCHLHLDLKMGR*SFSLMR
Trigger: TCTCATCAATGAAAATGACAACCGGCCCATCTTCAG...GTCCAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp TGTCTTAGAATAGAAGCCCCTTCCCCATTCTCAGACGGTGTAATTCAGGCGGGGCTGAAGATGGGCCGGTaGTCATTTTCATTGATGAGA +
Preference number: 5 (lower is better)
Translates to: CLRIEAPSPFSDGVIQAGLKMGR*SFSLMR
Trigger: TCTCATCAATGAAAATGACAACCGGCCCATCTTCAG...CCCCGCCTGAATTACACCGTCTGAGAATGGGGAAGGGGCTTCTATTCTAAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS-3UTR CAA 90 bp AGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATCTGCATCATTGTCAGTaGCCAGGACTGTCAGCACAG +
Preference number: 5 (lower is better)
Translates to: SWDYRYLTPHLAISRTFYLHHCQ*PGLSAQ
Trigger: CTGTGCTGACAGTCCTGGCAACTGACAATGATGCAG...ATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp CAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTAGTGGGCACGTTGTCGTaGACATCCAACACATTGATC +
Preference number: 5 (lower is better)
Translates to: QLGLQVPNTTLGHLKDILVGTLS*TSNTLI
Trigger: GATCAATGTGTTGGATGTCAACGACAACGTGCCCAC...TAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp CGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCATCTAGGATGTATTCAGACTaGGTCTCTCGGTCAAGCAGA +
Preference number: 5 (lower is better)
Translates to: RCCLMKDFWSRDVHSWSSRMYSD*VSRSSR
Trigger: TCTGCTTGACCGAGAGACCAAGTCTGAATACATCCT...AGATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp GACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAACGCATCAGGAGCCCATaGCTGACATGGATCCGGAAG +
Preference number: 5 (lower is better)
Translates to: DYRYLTPHLAISRTFYDKRIRSP*LTWIRK
Trigger: CTTCCGGATCCATGTCAGCAATGGGCTCCTGATGCG...TTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp AACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAACGTGGATTCTCCGGGTaGTCCTTCACAGAAATGGTC +
Preference number: 5 (lower is better)
Translates to: NRREHQSLLFISWAHIWERGFSG*SFTEMV
Trigger: GACCATTTCTGTGAAGGACAACCCGGAGAATCCACG...TTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp CAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGTGATCCCAAAGGGCTaGAACTGGGGCGTATTGTCA +
Preference number: 5 (lower is better)
Translates to: QNRREHQSLLFISWAHIWVIPKG*NWGVLS
Trigger: TGACAATACGCCCCAGTTCAAGCCCTTTGGGATCAC...CCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp TCAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGTCACCCGTGGTGGGGTaGATGGCAAACTTGCTCTCT +
Preference number: 5 (lower is better)
Translates to: SKPEGTSVTSVYKLGTHLSPVVG*MANLLS
Trigger: AGAGAGCAAGTTTGCCATCAACCCCACCACGGGTGA...CAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp AAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAACAAAGACAGGGCGGTaGTCATTGACGTCGATGACC +
Preference number: 5 (lower is better)
Translates to: KPEGTSVTSVYKLGTHLGTKTGR*SLTSMT
Trigger: GGTCATCGACGTCAATGACAACCGCCCTGTCTTTGT...TCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp GAATGCTTGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCAAAGACAAGGCTGTTGTaGCCAATGTCTGCATCCAGG +
Preference number: 5 (lower is better)
Translates to: ECLFIDIDFLVHVGMPPPKTRLL*PMSASR
Trigger: CCTGGATGCAGACATTGGCAACAACAGCCTTGTCTT...TGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACAAGCATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp GAATGCTTGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCAATGATCTGGCCCAGCTaGGCAATGTTGTCATACTCC +
Preference number: 5 (lower is better)
Translates to: ECLFIDIDFLVHVGMPPPMIWPS*AMLSYS
Trigger: GGAGTATGACAACATTGCCAAGCTGGGCCAGATCAT...TGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACAAGCATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp CTCCAGGTGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTATAGAAACCAAGTCTTaGGGTTTAGAAAGTGGGGCA +
Preference number: 5 (lower is better)
Translates to: LQVPKPSMEKLPNGKGSLIETKS*GLESGA
Trigger: TGCCCCACTTTCTAAACCCAAAGACTTGGTTTCTAT...AAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCACCTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CAA 90 bp AGGACCCAACTAAACACACCCGTGGGCCCCCAGTTTGCAGCTTTGGTATTAGATCAGCATGGGTCCTTTTaGTCTATGTCTTCTCTTTCC +
Preference number: 5 (lower is better)
Translates to: RTQLNTPVGPQFAALVLDQHGSF*SMSSLS
Trigger: GGAAAGAGAAGACATAGACAAAAAGGACCCATGCTG...ATCTAATACCAAAGCTGCAAACTGGGGGCCCACGGGTGTGTTTAGTTGGGTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CAA 90 bp TCCAGGTGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTTATGCTATCTGTGGTTTaGGTGAGTGCTTTGCTGATG +
Preference number: 5 (lower is better)
Translates to: SRCQSPAWRSCQMAKVPFMLSVV*VSALLM
Trigger: CATCAGCAAAGCACTCACCAAAACCACAGATAGCAT...AAAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCACCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS CCA 90 bp ATTGGTTCCAGGATGACACAACCAACTGGGCCGATGAGAATCTGCTaGAATTACTGCAAAAGAACTTTTCCCACAGGACTGTCAGCACAG +
Preference number: 5 (lower is better)
Translates to: IGSRMTQPTGPMRIC*NYCKRTFPTGLSAQ
Trigger: CTGTGCTGACAGTCCTGTGGGAAAAGTTCTTTTGCAGTAATTCCAGCAGATTCTCATCGGCCCAGTTGGTTGTGTCATCCTGGAACCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS-3UTR CAA 90 bp AAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTCCGGGGCATTGTCATaGATGTCAATAACCAGGATA +
Preference number: 5 (lower is better)
Translates to: KQLGLQVPNTTLGHLKDISGALS*MSITRI
Trigger: TATCCTGGTTATTGACATCAATGACAATGCCCCGGA...AATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp GTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTAGAACTGTACTCGGAGCTGTaGAACTCCGGGGCATTGTCA +
Preference number: 5 (lower is better)
Translates to: VAHIYHLDLLSIQSLVLELYSEL*NSGALS
Trigger: TGACAATGCCCCGGAGTTCAACAGCTCCGAGTACAG...TTCTAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS-3UTR CAA 90 bp TCAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGAAGGTGCCTGCATCATaGTCAGTTGCCAGGACTGTC +
Preference number: 5 (lower is better)
Translates to: SKPEGTSVTSVYKLGTHLKVPAS*SVARTV
Trigger: GACAGTCCTGGCAACTGACAATGATGCAGGCACCTT...CAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp TACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAGAGATGAGTCCCGTGTCCTaGTCCAGCGAGAACCTGTCA +
Preference number: 5 (lower is better)
Translates to: YRYLTPHLAISRTFYDKEMSPVS*SSENLS
Trigger: TGACAGGTTCTCGCTGGACAAGGACACGGGACTCAT...CTCTTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp AGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATCTGAAGGTGGGAGGGTaGTCATTCTCATCAAACACC +
Preference number: 5 (lower is better)
Translates to: SWDYRYLTPHLAISRTFYLKVGG*SFSSNT
Trigger: GGTGTTTGATGAGAATGACAACCCTCCCACCTTCAG...ATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp GACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAGTGGGGTGGTTGTCATaGATGTCCAGGAGGGTGATG +
Preference number: 5 (lower is better)
Translates to: DYRYLTPHLAISRTFYDKVGWLS*MSRRVM
Trigger: CATCACCCTCCTGGACATCAATGACAACCACCCCAC...TTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp CTCCATCACTGCTCAGCTGTGTGTACACTTAGACTTGTGATGTCTCTGGACCTTGTGGGGTCATTGTCATaGAGATCCAAGAGGTTCACA +
Preference number: 5 (lower is better)
Translates to: LHHCSAVCTLRLVMSLDLVGSLS*RSKRFT
Trigger: TGTGAACCTCTTGGATCTCAATGACAATGACCCCAC...AAGGTCCAGAGACATCACAAGTCTAAGTGTACACACAGCTGAGCAGTGATGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp CAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGCGGTACGTGATTaGGTTGAGGTTGTCGATGGA +
Preference number: 5 (lower is better)
Translates to: QNRREHQSLLFISWAHIWEAVRD*VEVVDG
Trigger: TCCATCGACAACCTCAACCAAATCACGTACCGCTTC...CCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp CAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGTCGCCAATGGAGTCATaGGTGGTGACGATCTCAAAG +
Preference number: 5 (lower is better)
Translates to: QNRREHQSLLFISWAHIWSPMES*VVTISK
Trigger: CTTTGAGATCGTCACCACCAATGACTCCATTGGCGA...CCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp TCAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGTACTCTAGCTTTGGGTaGAGGTCGTGGTCAATGGCC +
Preference number: 5 (lower is better)
Translates to: SKPEGTSVTSVYKLGTHLYSSFG*RSWSMA
Trigger: GGCCATTGACCACGACCTCAACCCAAAGCTAGAGTA...CAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp AGATCTTATGAAGGTAGAGGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGAATGATCTGGCCCAGCTaGGCAATGTTGTCATACTCC +
Preference number: 5 (lower is better)
Translates to: RSYEGRGQMLNERLAKVGMIWPS*AMLSYS
Trigger: GGAGTATGACAACATTGCCAAGCTGGGCCAGATCAT...TCCCACTTTTGCCAGACGCTCATTCAGCATCTGACCTCTACCTTCATAAGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS GCA 90 bp ACAATTGGTTCCAGGATGACACAACCAACTGGGCCGATGAGAATCTaGTGGAATTACTGCAAAAGAACTTTTCCCACAGGACTGTCAGCA +
Preference number: 5 (lower is better)
Translates to: TIGSRMTQPTGPMRI*WNYCKRTFPTGLSA
Trigger: TGCTGACAGTCCTGTGGGAAAAGTTCTTTTGCAGTAATTCCAGCAGATTCTCATCGGCCCAGTTGGTTGTGTCATCCTGGAACCAATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS-3UTR CAA 90 bp TGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTTAGTCAATCCGGGGCATTGTCATaGATGTCAATAACCAGGATA +
Preference number: 5 (lower is better)
Translates to: CQSPAWRSCQMAKVPFSQSGALS*MSITRI
Trigger: TATCCTGGTTATTGACATCAATGACAATGCCCCGGA...TTGACTAAAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp TACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAGAGATGAAGTGGTGGGAGTaGTTCCCCACCAAGTACACC +
Preference number: 5 (lower is better)
Translates to: YRYLTPHLAISRTFYDKEMKWWE*FPTKYT
Trigger: GGTGTACTTGGTGGGGAACAACTCCCACCACTTCAT...CTCTTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp TGTGTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTAATGAAGTGGTGGGAGTaGTTCCCCACCAAGTACACC +
Preference number: 5 (lower is better)
Translates to: CVAHIYHLDLLSIQSLVLMKWWE*FPTKYT
Trigger: GGTGTACTTGGTGGGGAACAACTCCCACCACTTCAT...TAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS-3UTR CAA 90 bp AGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATTCAGGCACACTCTCATaGGCAAAGAGATCAAAGTCG +
Preference number: 5 (lower is better)
Translates to: SWDYRYLTPHLAISRTFYSGTLS*AKRSKS
Trigger: CGACTTTGATCTCTTTGCCAATGAGAGTGTGCCTGA...ATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp CTCCATCACTGCTCAGCTGTGTGTACACTTAGACTTGTGATGTCTCTGGACCTTCTGAAGATGGGCCGGTaGTCATTTTCATTGATGAGA +
Preference number: 5 (lower is better)
Translates to: LHHCSAVCTLRLVMSLDLLKMGR*SFSLMR
Trigger: TCTCATCAATGAAAATGACAACCGGCCCATCTTCAG...AAGGTCCAGAGACATCACAAGTCTAAGTGTACACACAGCTGAGCAGTGATGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CAA 90 bp TGTGTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTATCGTACAGGCTGATGTaGTACAGTGGCTGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: CVAHIYHLDLLSIQSLVLSYRLM*YSGWLK
Trigger: CTTCAGCCAGCCACTGTACAACATCAGCCTGTACGA...TAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS-3UTR CAA 90 bp GACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAATTGACATCCAACACATaGATCCTGACCCGGCCTGTG +
Preference number: 5 (lower is better)
Translates to: DYRYLTPHLAISRTFYDKLTSNT*ILTRPV
Trigger: CACAGGCCGGGTCAGGATCAATGTGTTGGATGTCAA...TTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp AGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATAGGATGTATTCAGACTaGGTCTCTCGGTCAAGCAGA +
Preference number: 5 (lower is better)
Translates to: SWDYRYLTPHLAISRTFYRMYSD*VSRSSR
Trigger: TCTGCTTGACCGAGAGACCAAGTCTGAATACATCCT...ATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp AGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGCCAGTATGGGGTTGTTGTCATaGATGTCCACGATTTCCAGG +
Preference number: 5 (lower is better)
Translates to: REHQSLLFISWAHIWEASMGLLS*MSTISR
Trigger: CCTGGAAATCGTGGACATCAATGACAACAACCCCAT...ACTGGCTTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp AGATCTTATGAAGGTAGAGGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGATCAATGAGTGCAAAGTaGCCTGAGTCAGCATCAGTG +
Preference number: 5 (lower is better)
Translates to: RSYEGRGQMLNERLAKVGSMSAK*PESASV
Trigger: CACTGATGCTGACTCAGGCAACTTTGCACTCATTGA...TCCCACTTTTGCCAGACGCTCATTCAGCATCTGACCTCTACCTTCATAAGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp AGATCTTATGAAGGTAGAGGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGATGCACATTGTCAGTATaGACAATGGCCCCAGTGATG +
Preference number: 5 (lower is better)
Translates to: RSYEGRGQMLNERLAKVGCTLSV*TMAPVM
Trigger: CATCACTGGGGCCATTGTCAATACTGACAATGTGCA...TCCCACTTTTGCCAGACGCTCATTCAGCATCTGACCTCTACCTTCATAAGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CAA 90 bp AGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGCCAGTTGCACATTGTCAGTATaGACAATGGCCCCAGTGATG +
Preference number: 5 (lower is better)
Translates to: REHQSLLFISWAHIWEASCTLSV*TMAPVM
Trigger: CATCACTGGGGCCATTGTCAATACTGACAATGTGCA...ACTGGCTTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp TCAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGTTCCGTAGCTGCTCCTaGTTCTCATCGATCATCTGG +
Preference number: 5 (lower is better)
Translates to: SKPEGTSVTSVYKLGTHLFRSCS*FSSIIW
Trigger: CCAGATGATCGATGAGAACAAGGAGCAGCTACGGAA...CAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp CGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCATCTCTTTCTAGCCTCATCTaGATCCAAAACTCCAGGAAA +
Preference number: 5 (lower is better)
Translates to: RCCLMKDFWSRDVHSWSSLSSLI*IQNSRK
Trigger: TTTCCTGGAGTTTTGGATCAAGATGAGGCTAGAAAG...AGATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CAA 90 bp GCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTTAGTCAAGCCACAGAGCAAGTTATaGACAGAGTTGGTCTTAAGT +
Preference number: 5 (lower is better)
Translates to: AKAQHGEVAKWQRFPLVKPQSKL*TELVLS
Trigger: ACTTAAGACCAACTCTGTCAATAACTTGCTCTGTGG...CTTGACTAAAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS TCA 90 bp GGGGCAGAGAAGACATGCTGTTTTAGTGCTTTGTCACAGCCATGTTaGTTCTTCTATCATTCCTCTGGGCCTTCCAAGAAGTACACGTAT +
Preference number: 5 (lower is better)
Translates to: GAEKTCCFSALSQPC*FFYHSSGPSKKYTY
Trigger: ATACGTGTACTTCTTGGAAGGCCCAGAGGAATGATAGAAGAATCAACATGGCTGTGACAAAGCACTAAAACAGCATGTCTTCTCTGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642965.1
CDS-3UTR CAA 90 bp GTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTAGAACCCAAATTCTCATCCTaGTCCACCACCTGGATGAAG +
Preference number: 5 (lower is better)
Translates to: VAHIYHLDLLSIQSLVLEPKFSS*STTWMK
Trigger: CTTCATCCAGGTGGTGGACAAGGATGAGAATTTGGG...TTCTAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646131.1
CDS-3UTR CAA 90 bp TACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAGAGAGAAAGATGGGCCGGTaGTCATTCACATCCAGGACA +
Preference number: 5 (lower is better)
Translates to: YRYLTPHLAISRTFYDKERKMGR*SFTSRT
Trigger: TGTCCTGGATGTGAATGACAACCGGCCCATCTTTCT...CTCTTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp GACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAAGAAAGATGGGCCGGTaGTCATTCACATCCAGGACA +
Preference number: 5 (lower is better)
Translates to: DYRYLTPHLAISRTFYDKRKMGR*SFTSRT
Trigger: TGTCCTGGATGTGAATGACAACCGGCCCATCTTTCT...TTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp CATAACTCGTTCCTGGCCACAGAGCAAGTTATTGACAGAGTTGGTCTTAAGTTTGTTTTGGTGAGTGCTTaGCTGATGACCCGTCAAAGC +
Preference number: 5 (lower is better)
Translates to: HNSFLATEQVIDRVGLKFVLVSA*LMTRQS
Trigger: GCTTTGACGGGTCATCAGCAAAGCACTCACCAAAAC...AAACTTAAGACCAACTCTGTCAATAACTTGCTCTGTGGCCAGGAACGAGTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CAA 90 bp TGTGTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTATCAGGCACACTCTCATaGGCAAAGAGATCAAAGTCG +
Preference number: 5 (lower is better)
Translates to: CVAHIYHLDLLSIQSLVLSGTLS*AKRSKS
Trigger: CGACTTTGATCTCTTTGCCAATGAGAGTGTGCCTGA...TAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS-3UTR CAA 90 bp AAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAATTACAGATCCTGTGTaGATATTCACAGCAAAGGCG +
Preference number: 5 (lower is better)
Translates to: KPEGTSVTSVYKLGTHLGITDPV*IFTAKA
Trigger: CGCCTTTGCTGTGAATATCAACACAGGATCTGTAAT...TCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp GAATGCTTGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCAGAGAATGCTTGTTCATaGACATTGACTTTCTTGTCC +
Preference number: 5 (lower is better)
Translates to: ECLFIDIDFLVHVGMPPPENACS*TLTFLS
Trigger: GGACAAGAAAGTCAATGTCAATGAACAAGCATTCTC...TGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACAAGCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp AGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGGAGCTCAACCAATGTaGGTTAGATTGGAAGAAATG +
Preference number: 5 (lower is better)
Translates to: SWDYRYLTPHLAISRTFYGAQPM*VRLEEM
Trigger: CATTTCTTCCAATCTAACCAACATTGGTTGAGCTCC...ATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp TCAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGTCAATAACCAGGATATaGAAGGTCGTGGTGACTGTA +
Preference number: 5 (lower is better)
Translates to: SKPEGTSVTSVYKLGTHLSITRI*KVVVTV
Trigger: TACAGTCACCACGACCTTCAATATCCTGGTTATTGA...CAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CAA 90 bp TACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAAGAGCTGAAGATGGGCCGGTaGTCATTTTCATTGATGAGA +
Preference number: 5 (lower is better)
Translates to: YRYLTPHLAISRTFYDKELKMGR*SFSLMR
Trigger: TCTCATCAATGAAAATGACAACCGGCCCATCTTCAG...CTCTTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp GTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTAGAACTGAAGATGGGCCGGTaGTCATTTTCATTGATGAGA +
Preference number: 5 (lower is better)
Translates to: VAHIYHLDLLSIQSLVLELKMGR*SFSLMR
Trigger: TCTCATCAATGAAAATGACAACCGGCCCATCTTCAG...TTCTAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS-3UTR CAA 90 bp AACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGAGAATGCTTGTTCATaGACATTGACTTTCTTGTCC +
Preference number: 5 (lower is better)
Translates to: NRREHQSLLFISWAHIWEENACS*TLTFLS
Trigger: GGACAAGAAAGTCAATGTCAATGAACAAGCATTCTC...TTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CAA 90 bp GACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAACCAATGTTGGTTAGATaGGAAGAAATGGTGCTCCCT +
Preference number: 5 (lower is better)
Translates to: DYRYLTPHLAISRTFYDKPMLVR*EEMVLP
Trigger: AGGGAGCACCATTTCTTCCAATCTAACCAACATTGG...TTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp GTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTAGAAGCACACATCTACCACTaGGATCTGCTTAGCATTCAA +
Preference number: 5 (lower is better)
Translates to: VAHIYHLDLLSIQSLVLEAHIYH*DLLSIQ
Trigger: TTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGC...TTCTAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS-3UTR CAA 90 bp GACTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATGACAAATCAATAACCAGGATATaGAAGGTCGTGGTGACTGTA +
Preference number: 5 (lower is better)
Translates to: DYRYLTPHLAISRTFYDKSITRI*KVVVTV
Trigger: TACAGTCACCACGACCTTCAATATCCTGGTTATTGA...TTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS-3UTR CAA 90 bp TGTGTAGCACACATCTACCACTTGGATCTGCTTAGCATTCAATCCCTTGTCTTATCAATAACCAGGATATaGAAGGTCGTGGTGACTGTA +
Preference number: 5 (lower is better)
Translates to: CVAHIYHLDLLSIQSLVLSITRI*KVVVTV
Trigger: TACAGTCACCACGACCTTCAATATCCTGGTTATTGA...TAAGACAAGGGATTGAATGCTAAGCAGATCCAAGTGGTAGATGTGTGCTACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646131.1
CDS-3UTR CAA 90 bp CATAACTCGTTCCTGGCCACAGAGCAAGTTATTGACAGAGTTGGTCTTAAGTTTAAGTTATTGACAGAGTaGGTCTTAAGTTTCCAGGCC +
Preference number: 5 (lower is better)
Translates to: HNSFLATEQVIDRVGLKFKLLTE*VLSFQA
Trigger: GGCCTGGAAACTTAAGACCAACTCTGTCAATAACTT...AAACTTAAGACCAACTCTGTCAATAACTTGCTCTGTGGCCAGGAACGAGTTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS GCA 72 bp GCGTCTTCCCGCCGGCGCGAAGGCTCATCCGCGGCGTaGCGGCAGCTCCTGGGTCTCCGCGGGCCGCTCGCC +
Preference number: 6 (lower is better)
Translates to: ASSRRREGSSAA*RQLLGLRGPLA
Trigger: GGCGAGCGGCCCGCGGAGACCCAGGAGCTGCCGGCACGCCGCGGATGAGCCTTCGCGCCGGCGGGAAGACGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000461841.7
ENST00000616684.4
ENST00000644511.1
CDS TCA 72 bp GGCTCTGCCACCCCGCGCTCCATGCCCAGGCCGGGCTaGCTAGCCCCGACCACCTCAGCGTCCGGCCGCCGT +
Preference number: 6 (lower is better)
Translates to: GSATPRSMPRPG*LAPTTSASGRR
Trigger: ACGGCGGCCGGACGCTGAGGTGGTCGGGGCTAGTCAGCCCGGCCTGGGCATGGAGCGCGGGGTGGCAGAGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000461841.7
ENST00000616684.4
ENST00000644511.1
CDS CCA 72 bp GCCGCTCGCAACTTCAGGCGCGCCGGGGGCTCGGACTaGGCGCGCCCCAAACGTCCAGAGGCTCTGCCACCC +
Preference number: 6 (lower is better)
Translates to: AARNFRRAGGSD*ARPKRPEALPP
Trigger: GGGTGGCAGAGCCTCTGGACGTTTGGGGCGCGCCCAGTCCGAGCCCCCGGCGCGCCTGAAGTTGCGAGCGGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000461841.7
ENST00000616684.4
ENST00000644511.1
CDS GCA 72 bp GCTCGGACTGGGCGCGCCCCAAACGTCCAGAGGCTCTaGCACCCCGCGCTCCATGCCCAGGCCGGGCTGACT +
Preference number: 6 (lower is better)
Translates to: ARTGRAPNVQRL*HPALHAQAGLT
Trigger: AGTCAGCCCGGCCTGGGCATGGAGCGCGGGGTGGCAGAGCCTCTGGACGTTTGGGGCGCGCCCAGTCCGAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000461841.7
ENST00000616684.4
ENST00000644511.1
CDS CAA 90 bp CCACCCGCTCCTCCCTGTGGCCACCCCCATCGCTCACCGACAGGGTaGGGGTGCCCTCGTCCTCCACAGTGGCCACCAGGTGGTAGAAGC +
Preference number: 6 (lower is better)
Translates to: PPAPPCGHPHRSPTG*GCPRPPQWPPGGRS
Trigger: GCTTCTACCACCTGGTGGCCACTGTGGAGGACGAGGGCACCCCAACCCTGTCGGTGAGCGATGGGGGTGGCCACAGGGAGGAGCGGGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398792.3
CDS CCA 72 bp CTCCCTGTGGCCACCCCCATCGCTCACCGACAGGGTTaGGGTGCCCTCGTCCTCCACAGTGGCCACCAGGTG +
Preference number: 6 (lower is better)
Translates to: LPVATPIAHRQG*GALVLHSGHQV
Trigger: CACCTGGTGGCCACTGTGGAGGACGAGGGCACCCCAACCCTGTCGGTGAGCGATGGGGGTGGCCACAGGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398792.3
CDS CAA 72 bp CCTCCCTGTGGCCACCCCCATCGCTCACCGACAGGGTaGGGGTGCCCTCGTCCTCCACAGTGGCCACCAGGT +
Preference number: 6 (lower is better)
Translates to: PPCGHPHRSPTG*GCPRPPQWPPG
Trigger: ACCTGGTGGCCACTGTGGAGGACGAGGGCACCCCAACCCTGTCGGTGAGCGATGGGGGTGGCCACAGGGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398792.3
CDS TCA 72 bp GTCGTGGTTGTAGGCCTCCACTATCAGCACGTGGGATaGGTTCCGCTCCCGGTCCAGGGGCCGGGGCCCTCG +
Preference number: 6 (lower is better)
Translates to: VVVVGLHYQHVG*VPLPVQGPGPS
Trigger: CGAGGGCCCCGGCCCCTGGACCGGGAGCGGAACTCATCCCACGTGCTGATAGTGGAGGCCTACAACCACGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398809.9
ENST00000616684.4
CDS TCA 72 bp GGTCAGGCGGGGCAGGCCGTGTGGCGATCTCACCGCTaGTGCGGTCCATGCGGAAGGCCATGTCCTTGTTGC +
Preference number: 6 (lower is better)
Translates to: GQAGQAVWRSHR*CGPCGRPCPCC
Trigger: GCAACAAGGACATGGCCTTCCGCATGGACCGCATCAGCGGTGAGATCGCCACACGGCCTGCCCCGCCTGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224721.12
ENST00000398792.3
CDS CCA 72 bp TCATGGGGGTCGGGGTTCTCCCGGTCCAGCATGGCGTaGGTGGTGCGGATCTTGCCCGTGGTGCTGTTGAGG +
Preference number: 6 (lower is better)
Translates to: SWGSGFSRSSMA*VVRILPVVLLR
Trigger: CCTCAACAGCACCACGGGCAAGATCCGCACCACCCACGCCATGCTGGACCGGGAGAACCCCGACCCCCATGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000442677.4
ENST00000466757.8
ENST00000616684.4
CDS CCA 72 bp TGGCTGTGCCCGAGAGAGGAACGGTGCCCCGGTCGGTaGCCACCACCGTTAGCCTGTAGGACTCCTGCTCCT +
Preference number: 6 (lower is better)
Translates to: WLCPREERCPGR*PPPLACRTPAP
Trigger: AGGAGCAGGAGTCCTACAGGCTAACGGTGGTGGCCACCGACCGGGGCACCGTTCCTCTCTCGGGCACAGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS TCA 72 bp GCTTCCCTACAGGGCCGTTGTCGATGGCCTCCAGGATaGGCATGTAGGCGGCTGTGGTCTCCCGGTCCAGGC +
Preference number: 6 (lower is better)
Translates to: ASLQGRCRWPPG*ACRRLWSPGPG
Trigger: GCCTGGACCGGGAGACCACAGCCGCCTACATGCTCATCCTGGAGGCCATCGACAACGGCCCTGTAGGGAAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398809.9
ENST00000442677.4
ENST00000466757.8
ENST00000616684.4
CDS TCA 72 bp CCACAGTCGGCCCTGGAGAGCTCAGTGGCCCTGCAGTaGAGCGGGGACTCACCAGGACTGTCAGCACAGAGG +
Preference number: 6 (lower is better)
Translates to: PQSALESSVALQ*SGDSPGLSAQR
Trigger: CCTCTGTGCTGACAGTCCTGGTGAGTCCCCGCTTCACTGCAGGGCCACTGAGCTCTCCAGGGCCGACTGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461841.7
ENST00000643732.1
CDS GCA 72 bp CCTCACCACAGTCGGCCCTGGAGAGCTCAGTGGCCCTaGAGTGAAGCGGGGACTCACCAGGACTGTCAGCAC +
Preference number: 6 (lower is better)
Translates to: PHHSRPWRAQWP*SEAGTHQDCQH
Trigger: GTGCTGACAGTCCTGGTGAGTCCCCGCTTCACTGCAGGGCCACTGAGCTCTCCAGGGCCGACTGTGGTGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461841.7
ENST00000643732.1
CDS CCA 72 bp TGGGTGCCTCACCACAGTCGGCCCTGGAGAGCTCAGTaGCCCTGCAGTGAAGCGGGGACTCACCAGGACTGT +
Preference number: 6 (lower is better)
Translates to: WVPHHSRPWRAQ*PCSEAGTHQDC
Trigger: ACAGTCCTGGTGAGTCCCCGCTTCACTGCAGGGCCACTGAGCTCTCCAGGGCCGACTGTGGTGAGGCACCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461841.7
ENST00000643732.1
CDS CAA 72 bp ACCTGCCCATTGCTGCCAGCATCAGGGTCCCAGGCCTaGACAGTAGCCACTCGCTGGCCCACAGGGCAGTCC +
Preference number: 6 (lower is better)
Translates to: TCPLLPASGSQA*TVATRWPTGQS
Trigger: GGACTGCCCTGTGGGCCAGCGAGTGGCTACTGTCAAGGCCTGGGACCCTGATGCTGGCAGCAATGGGCAGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224721.12
ENST00000398792.3
CDS TCA 72 bp GGAAGGTCCACACTCTGGGCCCCGGCTGGCCCTCAGTaGCTTCAAATGGTCCCTCATAGTCCCGGGGGAAGG +
Preference number: 6 (lower is better)
Translates to: GRSTLWAPAGPQ*LQMVPHSPGGR
Trigger: CCTTCCCCCGGGACTATGAGGGACCATTTGAAGTCACTGAGGGCCAGCCGGGGCCCAGAGTGTGGACCTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS CCA 72 bp CAGAGATCAGCACCAAAAGCCAGGCCACGTGGCAGCTaGTGGCAACATGGCGCCCCATGGCTCCGTGTGCGT +
Preference number: 6 (lower is better)
Translates to: QRSAPKARPRGS*WQHGAPWLRVR
Trigger: ACGCACACGGAGCCATGGGGCGCCATGTTGCCACCAGCTGCCACGTGGCCTGGCTTTTGGTGCTGATCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000461841.7
ENST00000616684.4
CDS CCA 72 bp GTGCCTGGCTCAGCCGACTCCAGCACGCTCACTGTCTaGATGGGGTTGAGGAACTCGGGGCGGGAGTCATTG +
Preference number: 6 (lower is better)
Translates to: VPGSADSSTLTV*MGLRNSGRESL
Trigger: CAATGACTCCCGCCCCGAGTTCCTCAACCCCATCCAGACAGTGAGCGTGCTGGAGTCGGCTGAGCCAGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS CAA 90 bp TTCCGCTCCCGGTCCAGGGGCCGGGGCCCTCGCATCAGGAGCCCATaGCTGACATGGATCCGGAAGTTGTTGCCATGGTTACCATGGAGG +
Preference number: 6 (lower is better)
Translates to: FRSRSRGRGPRIRSP*LTWIRKLLPWLPWR
Trigger: CCTCCATGGTAACCATGGCAACAACTTCCGGATCCATGTCAGCAATGGGCTCCTGATGCGAGGGCCCCGGCCCCTGGACCGGGAGCGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398809.9
ENST00000616684.4
CDS CAA 90 bp GAGAAGACCACCTGCCCATTGCTGCCAGCATCAGGGTCCCAGGCCTaGACAGTAGCCACTCGCTGGCCCACAGGGCAGTCCTCGGGTATG +
Preference number: 6 (lower is better)
Translates to: EKTTCPLLPASGSQA*TVATRWPTGQSSGM
Trigger: CATACCCGAGGACTGCCCTGTGGGCCAGCGAGTGGCTACTGTCAAGGCCTGGGACCCTGATGCTGGCAGCAATGGGCAGGTGGTCTTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224721.12
ENST00000398792.3
CDS CAA 90 bp ACTCTGGGCACCCAGCAGCTGGTAGGTCACCACGGCGTAGATGTCTaGGTCTGCATCCAGGGCCAGGATGGGCCCATTGAGCACCGTGAG +
Preference number: 6 (lower is better)
Translates to: TLGTQQLVGHHGVDV*VCIQGQDGPIEHRE
Trigger: CTCACGGTGCTCAATGGGCCCATCCTGGCCCTGGATGCAGACCAAGACATCTACGCCGTGGTGACCTACCAGCTGCTGGGTGCCCAGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS GCA 72 bp CCTGCGGTCTCTCGAAGCCCCAGACGGCTGTACTGCTaGTGTGTGAACACGGGGGCCTCATCGTTGATGTCC +
Preference number: 6 (lower is better)
Translates to: PAVSRSPRRLYC*CVNTGASSLMS
Trigger: GGACATCAACGATGAGGCCCCCGTGTTCACACAGCAGCAGTACAGCCGTCTGGGGCTTCGAGAGACCGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000224721.12
ENST00000398792.3
ENST00000398809.9
ENST00000616684.4
CDS GCA 72 bp CCCAGAGGGTCTCCATCCATGATGCTGTACTCCACCTaGCCGTTGGGTCCTGAGTCTCGGTCATGGGCCAGG +
Preference number: 6 (lower is better)
Translates to: PRGSPSMMLYST*PLGPESRSWAR
Trigger: CCTGGCCCATGACCGAGACTCAGGACCCAACGGGCAGGTGGAGTACAGCATCATGGATGGAGACCCTCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS CCA 72 bp GGGATGGCCACCCGAATACGAATGTCCGCCTTCCCCTaGACGGAGGTCGGGGAGATGATGAAGTGGTGGGAG +
Preference number: 6 (lower is better)
Translates to: GMATRIRMSAFP*TEVGEMMKWWE
Trigger: CTCCCACCACTTCATCATCTCCCCGACCTCCGTCCAGGGGAAGGCGGACATTCGTATTCGGGTGGCCATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000442677.4
ENST00000461841.7
ENST00000466757.8
ENST00000470494.5
ENST00000616684.4
ENST00000643732.1
ENST00000646131.1
CDS CCA 72 bp GTCCGTGCAGTTCAGCCAGACCACCCGGAACTCGCGTaGCACGTCCTCGGACACAGACACATTGTACACGGC +
Preference number: 6 (lower is better)
Translates to: VRAVQPDHPELA*HVLGHRHIVHG
Trigger: GCCGTGTACAATGTGTCTGTGTCCGAGGACGTGCCACGCGAGTTCCGGGTGGTCTGGCTGAACTGCACGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000442677.4
ENST00000466757.8
ENST00000616684.4
CDS CCA 72 bp ACAAAATCCCTCTGGGTGCCTCACCACAGTCGGCCCTaGAGAGCTCAGTGGCCCTGCAGTGAAGCGGGGACT +
Preference number: 6 (lower is better)
Translates to: TKSLWVPHHSRP*RAQWPCSEAGT
Trigger: AGTCCCCGCTTCACTGCAGGGCCACTGAGCTCTCCAGGGCCGACTGTGGTGAGGCACCCAGAGGGATTTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461841.7
ENST00000643732.1
CDS CCA 72 bp CCCTCGAGGGAGGCTGAGCCTGCCCTAGAAGCCAGGTaGCTCGAAGTTAAAGCTGTGCGACCTCGGGCAAGT +
Preference number: 6 (lower is better)
Translates to: PSREAEPALEAR*LEVKAVRPRAS
Trigger: ACTTGCCCGAGGTCGCACAGCTTTAACTTCGAGCCACCTGGCTTCTAGGGCAGGCTCAGCCTCCCTCGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643732.1
CDS CAA 72 bp TCATCCAGGATGGTGATGAGCAGGTGGGCCGTGCTGTaGAGCAGCCCGATGTCCTCAGCCAGCAGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: SSRMVMSRWAVL*SSPMSSASSSS
Trigger: GCTGCTGCTGCTGGCTGAGGACATCGGGCTGCTCAACAGCACGGCCCACCTGCTCATCACCATCCTGGATGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS TCA 72 bp CCCAGAGTCTCGGTCTGTGGCTTGGACCACGATGACTaGCGTTCCAATGCCTGCGGTCTCTCGAAGCCCCAG +
Preference number: 6 (lower is better)
Translates to: PRVSVCGLDHDD*RSNACGLSKPQ
Trigger: CTGGGGCTTCGAGAGACCGCAGGCATTGGAACGTCAGTCATCGTGGTCCAAGCCACAGACCGAGACTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224721.12
ENST00000398792.3
ENST00000398809.9
ENST00000616684.4
CDS TCA 72 bp CGCAGCTCAGTAACAGAGGCCAGGGAGTGGGGTGTATaGGCAAGATCTCGTCACCCTCGAGGGAGGCTGAGC +
Preference number: 6 (lower is better)
Translates to: RSSVTEAREWGV*ARSRHPRGRLS
Trigger: GCTCAGCCTCCCTCGAGGGTGACGAGATCTTGCTCATACACCCCACTCCCTGGCCTCTGTTACTGAGCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643732.1
CDS GCA 72 bp TGGCCACCACTTGGTAGATGGAGACCCCCGCCGGGATaGCTTCAAGCACCTCGGCCACAAAAGGCAGGTTCT +
Preference number: 6 (lower is better)
Translates to: WPPLGRWRPPPG*LQAPRPQKAGS
Trigger: AGAACCTGCCTTTTGTGGCCGAGGTGCTTGAAGGCATCCCGGCGGGGGTCTCCATCTACCAAGTGGTGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000442677.4
ENST00000466757.8
ENST00000616684.4
CDS GCA 72 bp CAGCTGGTAGGTCACCACGGCGTAGATGTCTTGGTCTaGATCCAGGGCCAGGATGGGCCCATTGAGCACCGT +
Preference number: 6 (lower is better)
Translates to: QLVGHHGVDVLV*IQGQDGPIEHR
Trigger: ACGGTGCTCAATGGGCCCATCCTGGCCCTGGATGCAGACCAAGACATCTACGCCGTGGTGACCTACCAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS GCA 72 bp GGCCGGGGCAGCACCTGTGATGAAGTAGCTGAGCTCTaGATTGAGGCCCACGTCGTTGTCCGTGCAGTTCAG +
Preference number: 6 (lower is better)
Translates to: GRGSTCDEVAEL*IEAHVVVRAVQ
Trigger: CTGAACTGCACGGACAACGACGTGGGCCTCAATGCAGAGCTCAGCTACTTCATCACAGGTGCTGCCCCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS GCA 72 bp GACCACGGTGGAGTCCACCTTGGGGCCGCCGTCATCTaGCACCACTGTCAAGGTATAGAAGTCGCCCTTCTC +
Preference number: 6 (lower is better)
Translates to: DHGGVHLGAAVI*HHCQGIEVALL
Trigger: GAGAAGGGCGACTTCTATACCTTGACAGTGGTGGCAGATGACGGCGGCCCCAAGGTGGACTCCACCGTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398792.3
CDS CCA 72 bp AGTCGTAGCGGTCCACGGTCTCGTAGTCCAGTGGGATaGCCACCCGAATACGAATGTCCGCCTTCCCCTGGA +
Preference number: 6 (lower is better)
Translates to: SRSGPRSRSPVG*PPEYECPPSPG
Trigger: TCCAGGGGAAGGCGGACATTCGTATTCGGGTGGCCATCCCACTGGACTACGAGACCGTGGACCGCTACGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000442677.4
ENST00000461841.7
ENST00000466757.8
ENST00000470494.5
ENST00000616684.4
ENST00000643732.1
ENST00000646131.1
CDS CCA 72 bp AGGAGGGTGATGTTTACGGTGGCGATGCCAGTTTTCTaGTTGTGGCCCACACCCCCGTCCACTGCGCGAACG +
Preference number: 6 (lower is better)
Translates to: RRVMFTVAMPVF*LWPTPPSTART
Trigger: CGTTCGCGCAGTGGACGGGGGTGTGGGCCACAACCAGAAAACTGGCATCGCCACCGTAAACATCACCCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000442677.4
ENST00000466757.8
ENST00000616684.4
CDS CCA 72 bp GGCCGGGGCCCTCGCATCAGGAGCCCATTGCTGACATaGATCCGGAAGTTGTTGCCATGGTTACCATGGAGG +
Preference number: 6 (lower is better)
Translates to: GRGPRIRSPLLT*IRKLLPWLPWR
Trigger: CCTCCATGGTAACCATGGCAACAACTTCCGGATCCATGTCAGCAATGGGCTCCTGATGCGAGGGCCCCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398809.9
ENST00000616684.4
CDS CCA 72 bp ACCAGGCCACCATCCCCAGAGTCTCGGTCTGTGGCTTaGACCACGATGACTGACGTTCCAATGCCTGCGGTC +
Preference number: 6 (lower is better)
Translates to: TRPPSPESRSVA*TTMTDVPMPAV
Trigger: GACCGCAGGCATTGGAACGTCAGTCATCGTGGTCCAAGCCACAGACCGAGACTCTGGGGATGGTGGCCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224721.12
ENST00000398792.3
ENST00000398809.9
ENST00000616684.4
CDS CCA 72 bp CAGGATGGTCACCTGCAGGATGTGGTCCTTCTTCCGTaGAGGGGTGCCTCGGTCAGAAGCCACAACCTGGAG +
Preference number: 6 (lower is better)
Translates to: QDGHLQDVVLLP*RGASVRSHNLE
Trigger: CTCCAGGTTGTGGCTTCTGACCGAGGCACCCCTCCACGGAAGAAGGACCACATCCTGCAGGTGACCATCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224721.12
ENST00000398792.3
CDS CCA 72 bp TGCCTGGATGGTGATGAGGCTGGTGTTGAGCGTGTCTaGGCCCTCATCCAGCAGCACCTCATAGTGGGGCTG +
Preference number: 6 (lower is better)
Translates to: CLDGDEAGVERV*ALIQQHLIVGL
Trigger: CAGCCCCACTATGAGGTGCTGCTGGATGAGGGCCCAGACACGCTCAACACCAGCCTCATCACCATCCAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS CCA 72 bp ACTGTGCCGTTGGGACCCTCATCCAGGTCCAGTGCCTaGATGGTGATGAGGCTGGTGTTGAGCGTGTCTGGG +
Preference number: 6 (lower is better)
Translates to: TVPLGPSSRSSA*MVMRLVLSVSG
Trigger: CCCAGACACGCTCAACACCAGCCTCATCACCATCCAGGCACTGGACCTGGATGAGGGTCCCAACGGCACAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS CCA 72 bp AGGACTGAGAATCCAGGCGGGCAGTTCTCTAGCAGATaGACAGTGAGGGTGGCAGGGCTAAAGGTGGGCCGG +
Preference number: 6 (lower is better)
Translates to: RTENPGGQFSSR*TVRVAGLKVGR
Trigger: CCGGCCCACCTTTAGCCCTGCCACCCTCACTGTCCATCTGCTAGAGAACTGCCCGCCTGGATTCTCAGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS CCA 72 bp CTCTTTCTCCCCGCTACTCTGAAAGGCCCTTCTGGGTaGGGCGGGAGATATGCAGGGGGAGGCCAAGTCTTC +
Preference number: 6 (lower is better)
Translates to: LFLPATLKGPSG*GGRYAGGGQVF
Trigger: GAAGACTTGGCCTCCCCCTGCATATCTCCCGCCCCACCCAGAAGGGCCTTTCAGAGTAGCGGGGAGAAAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS CAA 72 bp ATGAAGAAGGCCCGCTCGCGGTTGCCCGCAGTGATGTaGAAGGTGAGGCGTGCATTGCAGCCACTGTCAGCG +
Preference number: 6 (lower is better)
Translates to: MKKARSRLPAVM*KVRRALQPLSA
Trigger: CGCTGACAGTGGCTGCAATGCACGCCTCACCTTCAACATCACTGCGGGCAACCGCGAGCGGGCCTTCTTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS CAA 72 bp ATGTCTTGGTCTGCATCCAGGGCCAGGATGGGCCCATaGAGCACCGTGAGAGGGGTGCCAGCGGGAGAGTTT +
Preference number: 6 (lower is better)
Translates to: MSWSASRARMGP*STVRGVPAGEF
Trigger: AAACTCTCCCGCTGGCACCCCTCTCACGGTGCTCAATGGGCCCATCCTGGCCCTGGATGCAGACCAAGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS CAA 72 bp ACCCAGCAGCTGGTAGGTCACCACGGCGTAGATGTCTaGGTCTGCATCCAGGGCCAGGATGGGCCCATTGAG +
Preference number: 6 (lower is better)
Translates to: TQQLVGHHGVDV*VCIQGQDGPIE
Trigger: CTCAATGGGCCCATCCTGGCCCTGGATGCAGACCAAGACATCTACGCCGTGGTGACCTACCAGCTGCTGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS CAA 90 bp CTCCTCCCCAGACACGCCAAACACCAGGGGGTCATTGTCCATGTCTaGGGCCAGCAACTGGGTCACAGAAGAACCCACAGGCGTGTCCTC +
Preference number: 6 (lower is better)
Translates to: LLPRHAKHQGVIVHV*GQQLGHRRTHRRVL
Trigger: GAGGACACGCCTGTGGGTTCTTCTGTGACCCAGTTGCTGGCCCAAGACATGGACAATGACCCCCTGGTGTTTGGCGTGTCTGGGGAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000442677.4
ENST00000461841.7
ENST00000616684.4
CDS CAA 90 bp CCCAGACGGCTGTACTGCTGCTGTGTGAACACGGGGGCCTCATCGTaGATGTCCTCCACGTACACAATCACCCTGACGGAGCTCCGCATG +
Preference number: 6 (lower is better)
Translates to: PRRLYCCCVNTGASS*MSSTYTITLTELRM
Trigger: CATGCGGAGCTCCGTCAGGGTGATTGTGTACGTGGAGGACATCAACGATGAGGCCCCCGTGTTCACACAGCAGCAGTACAGCCGTCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398809.9
ENST00000616684.4
CDS CAA 90 bp CCAATGGAGTCATTGGTGGTGACGATCTCAAAGGCCCCCGCGATGTaGCCAGAGGCCAGGGAGAAGACCACCTGCCCATTGCTGCCAGCA +
Preference number: 6 (lower is better)
Translates to: PMESLVVTISKAPAM*PEAREKTTCPLLPA
Trigger: TGCTGGCAGCAATGGGCAGGTGGTCTTCTCCCTGGCCTCTGGCAACATCGCGGGGGCCTTTGAGATCGTCACCACCAATGACTCCATTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224721.12
ENST00000398792.3
CDS CAA 90 bp TCTCTGTCCAGGGGCCTGGCCACAAACACTTCGCCAATGGAGTCATaGGTGGTGACGATCTCAAAGGCCCCCGCGATGTTGCCAGAGGCC +
Preference number: 6 (lower is better)
Translates to: SLSRGLATNTSPMES*VVTISKAPAMLPEA
Trigger: GGCCTCTGGCAACATCGCGGGGGCCTTTGAGATCGTCACCACCAATGACTCCATTGGCGAAGTGTTTGTGGCCAGGCCCCTGGACAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224721.12
ENST00000398792.3
CDS CAA 90 bp GTGACGATCCCTGTCGTGGCATTGATGAAGAAGGCCCGCTCGCGGTaGCCCGCAGTGATGTTGAAGGTGAGGCGTGCATTGCAGCCACTG +
Preference number: 6 (lower is better)
Translates to: VTIPVVALMKKARSR*PAVMLKVRRALQPL
Trigger: CAGTGGCTGCAATGCACGCCTCACCTTCAACATCACTGCGGGCAACCGCGAGCGGGCCTTCTTCATCAATGCCACGACAGGGATCGTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS TCA 72 bp TGGCGTGGGTGGTGCGGATCTTGCCCGTGGTGCTGTTaGGGCTGTAGAACTTGTTGGGTGGCTGGATGCTGT +
Preference number: 6 (lower is better)
Translates to: WRGWCGSCPWCC*GCRTCWVAGCC
Trigger: ACAGCATCCAGCCACCCAACAAGTTCTACAGCCTCAACAGCACCACGGGCAAGATCCGCACCACCCACGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000442677.4
ENST00000466757.8
ENST00000616684.4
CDS TCA 72 bp CATCCCCAGAGTCTCGGTCTGTGGCTTGGACCACGATaGCTGACGTTCCAATGCCTGCGGTCTCTCGAAGCC +
Preference number: 6 (lower is better)
Translates to: HPQSLGLWLGPR*LTFQCLRSLEA
Trigger: GGCTTCGAGAGACCGCAGGCATTGGAACGTCAGTCATCGTGGTCCAAGCCACAGACCGAGACTCTGGGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224721.12
ENST00000398792.3
ENST00000398809.9
ENST00000616684.4
CDS TCA 72 bp GGGTGGCGAGAATGCCTCCCGGTCAATGATGACACCTaGCCTCACGGTCACCACACCGGTGCTGCTGTTGAT +
Preference number: 6 (lower is better)
Translates to: GWRECLPVNDDT*PHGHHTGAAVD
Trigger: ATCAACAGCAGCACCGGTGTGGTGACCGTGAGGTCAGGTGTCATCATTGACCGGGAGGCATTCTCGCCACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS GCA 72 bp CACCTGGATGAAGAGTGGAAGGGCAAAGCCGACCTGTaGCAGCTCAGTGATGGCCACGCTGTACTCGGAGCT +
Preference number: 6 (lower is better)
Translates to: HLDEEWKGKADL*QLSDGHAVLGA
Trigger: AGCTCCGAGTACAGCGTGGCCATCACTGAGCTGGCACAGGTCGGCTTTGCCCTTCCACTCTTCATCCAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000442677.4
ENST00000461841.7
ENST00000466757.8
ENST00000470494.5
ENST00000616684.4
ENST00000643732.1
ENST00000646131.1
CDS GCA 72 bp CGTCAATCTCAAACTTCCCCTCTGCGCCCGACAGGATaGGGTAGTTCACCAGGCCACCATCCCCAGAGTCTC +
Preference number: 6 (lower is better)
Translates to: RQSQTSPLRPTG*GSSPGHHPQSL
Trigger: GAGACTCTGGGGATGGTGGCCTGGTGAACTACCGCATCCTGTCGGGCGCAGAGGGGAAGTTTGAGATTGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000224721.12
ENST00000398792.3
ENST00000398809.9
ENST00000616684.4
CDS GCA 72 bp CTTCACGGTGGAGTCCACCTTGGGGCCGCCGTCATCTaGCACCACTGTCAAGGTATAGAAGTCGCCCTTCTC +
Preference number: 6 (lower is better)
Translates to: LHGGVHLGAAVI*HHCQGIEVALL
Trigger: GAGAAGGGCGACTTCTATACCTTGACAGTGGTGGCAGATGACGGCGGCCCCAAGGTGGACTCCACCGTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS CCA 72 bp ACCAGGGGGTCATTGTCCATGTCTTGGGCCAGCAACTaGGTCACAGAAGAACCCACAGGCGTGTCCTCGCTG +
Preference number: 6 (lower is better)
Translates to: TRGSLSMSWASN*VTEEPTGVSSL
Trigger: CAGCGAGGACACGCCTGTGGGTTCTTCTGTGACCCAGTTGCTGGCCCAAGACATGGACAATGACCCCCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000442677.4
ENST00000461841.7
ENST00000616684.4
CDS CCA 72 bp GTGATGTTTACGGTGGCGATGCCAGTTTTCTGGTTGTaGCCCACACCCCCGTCCACTGCGCGAACGATGAGG +
Preference number: 6 (lower is better)
Translates to: VMFTVAMPVFWL*PTPPSTARTMR
Trigger: CCTCATCGTTCGCGCAGTGGACGGGGGTGTGGGCCACAACCAGAAAACTGGCATCGCCACCGTAAACATCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000442677.4
ENST00000466757.8
ENST00000616684.4
CDS CCA 72 bp TTGGGGGTGCCTCCTTCCCTGATTGCTGAGGTCCCTTaGACAAAATCCCTCTGGGTGCCTCACCACAGTCGG +
Preference number: 6 (lower is better)
Translates to: LGVPPSLIAEVP*TKSLWVPHHSR
Trigger: CCGACTGTGGTGAGGCACCCAGAGGGATTTTGTCCAAGGGACCTCAGCAATCAGGGAAGGAGGCACCCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000461841.7
ENST00000643732.1
CDS CCA 72 bp ACCAGGGGGTCATTGTCCATGTCTTGGGCCAGCAACTaGGTCACAGAAGAACCGTGTGCGTGTGTGCAGCGG +
Preference number: 6 (lower is better)
Translates to: TRGSLSMSWASN*VTEEPCACVQR
Trigger: CCGCTGCACACACGCACACGGTTCTTCTGTGACCCAGTTGCTGGCCCAAGACATGGACAATGACCCCCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644511.1
CDS CAA 72 bp GCCTCCTCCCCAGACACGCCAAACACCAGGGGGTCATaGTCCATGTCTTGGGCCAGCAACTGGGTCACAGAA +
Preference number: 6 (lower is better)
Translates to: ASSPDTPNTRGS*SMSWASNWVTE
Trigger: TTCTGTGACCCAGTTGCTGGCCCAAGACATGGACAATGACCCCCTGGTGTTTGGCGTGTCTGGGGAGGAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000442677.4
ENST00000461841.7
ENST00000616684.4
ENST00000644511.1
CDS CAA 72 bp AGGGTGATGTTTACGGTGGCGATGCCAGTTTTCTGGTaGTGGCCCACACCCCCGTCCACTGCGCGAACGATG +
Preference number: 6 (lower is better)
Translates to: RVMFTVAMPVFW*WPTPPSTARTM
Trigger: CATCGTTCGCGCAGTGGACGGGGGTGTGGGCCACAACCAGAAAACTGGCATCGCCACCGTAAACATCACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000442677.4
ENST00000466757.8
ENST00000616684.4
CDS CAA 72 bp TCATTGGTGGTGACGATCTCAAAGGCCCCCGCGATGTaGCCAGAGGCCAGGGAGAAGACCACCTGCCCATTG +
Preference number: 6 (lower is better)
Translates to: SLVVTISKAPAM*PEAREKTTCPL
Trigger: CAATGGGCAGGTGGTCTTCTCCCTGGCCTCTGGCAACATCGCGGGGGCCTTTGAGATCGTCACCACCAATGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224721.12
ENST00000398792.3
CDS CAA 72 bp CCTGTCGTGGCATTGATGAAGAAGGCCCGCTCGCGGTaGCCCGCAGTGATGTTGAAGGTGAGGCGTGCATTG +
Preference number: 6 (lower is better)
Translates to: PVVALMKKARSR*PAVMLKVRRAL
Trigger: CAATGCACGCCTCACCTTCAACATCACTGCGGGCAACCGCGAGCGGGCCTTCTTCATCAATGCCACGACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS CAA 72 bp TCAGCCGACTCCAGCACGCTCACTGTCTGGATGGGGTaGAGGAACTCGGGGCGGGAGTCATTGATGTCATCG +
Preference number: 6 (lower is better)
Translates to: SADSSTLTVWMG*RNSGRESLMSS
Trigger: CGATGACATCAATGACTCCCGCCCCGAGTTCCTCAACCCCATCCAGACAGTGAGCGTGCTGGAGTCGGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS CAA 90 bp AAGCGAGAGGCCTCCTCCCCAGACACGCCAAACACCAGGGGGTCATaGTCCATGTCTTGGGCCAGCAACTGGGTCACAGAAGAACCCACA +
Preference number: 6 (lower is better)
Translates to: KREASSPDTPNTRGS*SMSWASNWVTEEPT
Trigger: TGTGGGTTCTTCTGTGACCCAGTTGCTGGCCCAAGACATGGACAATGACCCCCTGGTGTTTGGCGTGTCTGGGGAGGAGGCCTCTCGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000442677.4
ENST00000461841.7
ENST00000616684.4
CDS CAA 90 bp TCTAGCAGATGGACAGTGAGGGTGGCAGGGCTAAAGGTGGGCCGGTaGTCATTGTCATCCAGGATGGTGATGAGCAGGTGGGCCGTGCTG +
Preference number: 6 (lower is better)
Translates to: SSRWTVRVAGLKVGR*SLSSRMVMSRWAVL
Trigger: CAGCACGGCCCACCTGCTCATCACCATCCTGGATGACAATGACAACCGGCCCACCTTTAGCCCTGCCACCCTCACTGTCCATCTGCTAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS CAA 90 bp GTGCCTGGCTCAGCCGACTCCAGCACGCTCACTGTCTGGATGGGGTaGAGGAACTCGGGGCGGGAGTCATTGATGTCATCGATCAGAATG +
Preference number: 6 (lower is better)
Translates to: VPGSADSSTLTVWMG*RNSGRESLMSSIRM
Trigger: CATTCTGATCGATGACATCAATGACTCCCGCCCCGAGTTCCTCAACCCCATCCAGACAGTGAGCGTGCTGGAGTCGGCTGAGCCAGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS CAA 90 bp CTCCTCCCCAGACACGCCAAACACCAGGGGGTCATTGTCCATGTCTaGGGCCAGCAACTGGGTCACAGAAGAACCGTGTGCGTGTGTGCA +
Preference number: 6 (lower is better)
Translates to: LLPRHAKHQGVIVHV*GQQLGHRRTVCVCA
Trigger: TGCACACACGCACACGGTTCTTCTGTGACCCAGTTGCTGGCCCAAGACATGGACAATGACCCCCTGGTGTTTGGCGTGTCTGGGGAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644511.1
CDS CAA 90 bp AAGCGAGAGGCCTCCTCCCCAGACACGCCAAACACCAGGGGGTCATaGTCCATGTCTTGGGCCAGCAACTGGGTCACAGAAGAACCGTGT +
Preference number: 6 (lower is better)
Translates to: KREASSPDTPNTRGS*SMSWASNWVTEEPC
Trigger: ACACGGTTCTTCTGTGACCCAGTTGCTGGCCCAAGACATGGACAATGACCCCCTGGTGTTTGGCGTGTCTGGGGAGGAGGCCTCTCGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644511.1
CDS CAA 90 bp CCCACACCCCCGTCCACTGCGCGAACGATGAGGATGTATTCAGACTaGGTCTCTCGGTCAAGCAGAGACGTGGTGGTGATTTCCCCTGAG +
Preference number: 6 (lower is better)
Translates to: PTPPSTARTMRMYSD*VSRSSRDVVVISPE
Trigger: CTCAGGGGAAATCACCACCACGTCTCTGCTTGACCGAGAGACCAAGTCTGAATACATCCTCATCGTTCGCGCAGTGGACGGGGGTGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000442677.4
ENST00000466757.8
ENST00000616684.4
CDS CAA 90 bp GTACCCAGTGCCAGATTCTCCAGGATGGCAGCCTCGTATGAGGCATaGGAGAACTGCACGGCCTCGTCCAGCTCGTTGAGCAGAGTGATG +
Preference number: 6 (lower is better)
Translates to: VPSARFSRMAASYEA*ENCTASSSSLSRVM
Trigger: CATCACTCTGCTCAACGAGCTGGACGAGGCCGTGCAGTTCTCCAATGCCTCATACGAGGCTGCCATCCTGGAGAATCTGGCACTGGGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224721.12
ENST00000398792.3
ENST00000398809.9
ENST00000616684.4
CDS CAA 90 bp GGCTTTGGCCTGGGTGCTGGTGTAGGCGTTGAAGCGGTACGTGATTaGGTTGAGGTTGTCGATGGAGTAGGCCTGGACCCGCACAATCTC +
Preference number: 6 (lower is better)
Translates to: GFGLGAGVGVEAVRD*VEVVDGVGLDPHNL
Trigger: GAGATTGTGCGGGTCCAGGCCTACTCCATCGACAACCTCAACCAAATCACGTACCGCTTCAACGCCTACACCAGCACCCAGGCCAAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224721.12
ENST00000398792.3
ENST00000398809.9
ENST00000616684.4
CDS CAA 90 bp GCAAAGGCGTCCTCCTGGTTGGGCACCAGGCGATCAGTGTCGTCCTaGGCCACAATGCCGACAATGTGGTACTCTAGCTTTGGGTTGAGG +
Preference number: 6 (lower is better)
Translates to: AKASSWLGTRRSVSS*ATMPTMWYSSFGLR
Trigger: CCTCAACCCAAAGCTAGAGTACCACATTGTCGGCATTGTGGCCAAGGACGACACTGATCGCCTGGTGCCCAACCAGGAGGACGCCTTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS CAA 90 bp CCCAGACGGCTGTACTGCTGCTGTGTGAACACGGGGGCCTCATCGTaGATGTCCTCCACGTACACAATCACCATGGAGGATGCGGTACCA +
Preference number: 6 (lower is better)
Translates to: PRRLYCCCVNTGASS*MSSTYTITMEDAVP
Trigger: TGGTACCGCATCCTCCATGGTGATTGTGTACGTGGAGGACATCAACGATGAGGCCCCCGTGTTCACACAGCAGCAGTACAGCCGTCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398792.3
CDS TCA 72 bp CCTGTGTGGTCTCGTAGTCCAGCTCCCGGATCACTGTaGCGATACCGCGGGCGCTGTCAATGGCGAAGAATT +
Preference number: 6 (lower is better)
Translates to: PVWSRSPAPGSL*RYRGRCQWRRI
Trigger: AATTCTTCGCCATTGACAGCGCCCGCGGTATCGTCACAGTGATCCGGGAGCTGGACTACGAGACCACACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000442677.4
ENST00000461841.7
ENST00000616684.4
ENST00000643732.1
ENST00000646131.1
CDS TCA 72 bp GGTTGTGGCCCACACCCCCGTCCACTGCGCGAACGATaGGGATGTATTCAGACTTGGTCTCTCGGTCAAGCA +
Preference number: 6 (lower is better)
Translates to: GCGPHPRPLRER*GCIQTWSLGQA
Trigger: TGCTTGACCGAGAGACCAAGTCTGAATACATCCTCATCGTTCGCGCAGTGGACGGGGGTGTGGGCCACAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000442677.4
ENST00000466757.8
ENST00000616684.4
CDS TCA 72 bp ATCCATGATGCTGTACTCCACCTGCCCGTTGGGTCCTaGGTCTCGGTCATGGGCCAGGAAGGTCCACACTCT +
Preference number: 6 (lower is better)
Translates to: IHDAVLHLPVGS*VSVMGQEGPHS
Trigger: AGAGTGTGGACCTTCCTGGCCCATGACCGAGACTCAGGACCCAACGGGCAGGTGGAGTACAGCATCATGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS TCA 72 bp CCGGGAAATTGTGACGTCTCTTTCTCCCCGCTACTCTaGAAGGCCCTTCTGGGTGGGGCGGGAGATATGCAG +
Preference number: 6 (lower is better)
Translates to: PGNCDVSFSPLL*KALLGGAGDMQ
Trigger: CTGCATATCTCCCGCCCCACCCAGAAGGGCCTTTCAGAGTAGCGGGGAGAAAGAGACGTCACAATTTCCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS TCA 72 bp TGCTGTTCAGGCCCTCATCCTTGTCCACCACCTGGATaGAGAGTGGAAGGGCAAAGCCGACCTGTGCCAGCT +
Preference number: 6 (lower is better)
Translates to: CCSGPHPCPPPG*RVEGQSRPVPA
Trigger: AGCTGGCACAGGTCGGCTTTGCCCTTCCACTCTTCATCCAGGTGGTGGACAAGGATGAGGGCCTGAACAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470494.5
CDS TCA 72 bp TGCTCCTGGCCAAACCCTCCCAATCCCCACAAAGGATaGCGGTCCCCAGTAGAATCTGGGACTTGTGGCTGG +
Preference number: 6 (lower is better)
Translates to: CSWPNPPNPHKG*RSPVESGTCGW
Trigger: CCAGCCACAAGTCCCAGATTCTACTGGGGACCGTCATCCTTTGTGGGGATTGGGAGGGTTTGGCCAGGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475158.1
CDS TCA 72 bp ACAGATCCTGTGGACCAGACCAGGCCAGGTTCAGCCTaGGAAGAACCCCCTAAAATCTGCCCTTCCCAGGGG +
Preference number: 6 (lower is better)
Translates to: TDPVDQTRPGSA*EEPPKICPSQG
Trigger: CCCCTGGGAAGGGCAGATTTTAGGGGGTTCTTCTCAGGCTGAACCTGGCCTGGTCTGGTCCACAGGATCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475158.1
CDS GCA 72 bp TCCAGGATGGCAGCCTCGTATGAGGCATTGGAGAACTaGACGGCCTCGTCCAGCTCGTTGAGCAGAGTGATG +
Preference number: 6 (lower is better)
Translates to: SRMAASYEALEN*TASSSSLSRVM
Trigger: CATCACTCTGCTCAACGAGCTGGACGAGGCCGTGCAGTTCTCCAATGCCTCATACGAGGCTGCCATCCTGGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224721.12
ENST00000398792.3
ENST00000398809.9
ENST00000616684.4
CDS GCA 72 bp TCACCTGCAGGATGTGGTCCTTCTTCCGTGGAGGGGTaGCTCGGTCAGAAGCCACAACCTGGAGGATGTAGT +
Preference number: 6 (lower is better)
Translates to: SPAGCGPSSVEG*LGQKPQPGGCS
Trigger: ACTACATCCTCCAGGTTGTGGCTTCTGACCGAGGCACCCCTCCACGGAAGAAGGACCACATCCTGCAGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224721.12
ENST00000398792.3
CDS GCA 72 bp TACTCTGAAAGGCCCTTCTGGGTGGGGCGGGAGATATaGAGGGGGAGGCCAAGTCTTCCTGCAAGATGCTGT +
Preference number: 6 (lower is better)
Translates to: YSERPFWVGREI*RGRPSLPARCC
Trigger: ACAGCATCTTGCAGGAAGACTTGGCCTCCCCCTGCATATCTCCCGCCCCACCCAGAAGGGCCTTTCAGAGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS CCA 72 bp ATCAAAGTCGTAGCGGTCCACGGTCTCGTAGTCCAGTaGGATGGCCACCCGAATACGAATGTCCGCCTTCCC +
Preference number: 6 (lower is better)
Translates to: IKVVAVHGLVVQ*DGHPNTNVRLP
Trigger: GGGAAGGCGGACATTCGTATTCGGGTGGCCATCCCACTGGACTACGAGACCGTGGACCGCTACGACTTTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000442677.4
ENST00000461841.7
ENST00000466757.8
ENST00000470494.5
ENST00000616684.4
ENST00000643732.1
ENST00000646131.1
CDS CCA 72 bp CGGACACAGACACATTGTACACGGCCGGGAAGAAGGTaGGCGTCTCGTCGTTCACATCCAGCACATGGATGG +
Preference number: 6 (lower is better)
Translates to: RTQTHCTRPGRR*ASRRSHPAHGW
Trigger: CCATCCATGTGCTGGATGTGAACGACGAGACGCCCACCTTCTTCCCGGCCGTGTACAATGTGTCTGTGTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000442677.4
ENST00000466757.8
ENST00000616684.4
CDS CCA 72 bp ACATTCACAAGCACCGTGGTGGTAGAGGTGAGGCGGTaGGATAAGATGGGGCACTGGTCTGTGGCAGTGACG +
Preference number: 6 (lower is better)
Translates to: TFTSTVVVEVRR*DKMGHWSVAVT
Trigger: CGTCACTGCCACAGACCAGTGCCCCATCTTATCCCACCGCCTCACCTCTACCACCACGGTGCTTGTGAATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS CAA 72 bp GAGGTCCCCACGGTGACGTTCTCGTACAGGCTGATGTaGTACAGTGGCTGGCTGAAGATGGGCCGGTTGTCA +
Preference number: 6 (lower is better)
Translates to: EVPTVTFSYRLM*YSGWLKMGRLS
Trigger: TGACAACCGGCCCATCTTCAGCCAGCCACTGTACAACATCAGCCTGTACGAGAACGTCACCGTGGGGACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000442677.4
ENST00000461841.7
ENST00000466757.8
ENST00000470494.5
ENST00000616684.4
ENST00000643732.1
ENST00000646131.1
CDS CAA 72 bp CTGGGTGCTGGTGTAGGCGTTGAAGCGGTACGTGATTaGGTTGAGGTTGTCGATGGAGTAGGCCTGGACCCG +
Preference number: 6 (lower is better)
Translates to: LGAGVGVEAVRD*VEVVDGVGLDP
Trigger: CGGGTCCAGGCCTACTCCATCGACAACCTCAACCAAATCACGTACCGCTTCAACGCCTACACCAGCACCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224721.12
ENST00000398792.3
ENST00000398809.9
ENST00000616684.4
CDS CAA 72 bp AGGGGCCTGGCCACAAACACTTCGCCAATGGAGTCATaGGTGGTGACGATCTCAAAGGCCCCCGCGATGTTG +
Preference number: 6 (lower is better)
Translates to: RGLATNTSPMES*VVTISKAPAML
Trigger: CAACATCGCGGGGGCCTTTGAGATCGTCACCACCAATGACTCCATTGGCGAAGTGTTTGTGGCCAGGCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224721.12
ENST00000398792.3
CDS CAA 72 bp TTCATGGGCAGGTTCAGCAGCACAGGGTCGTTGTCGTaGATGTCCAGCACCCGGATCCCCACCAGCATTGTG +
Preference number: 6 (lower is better)
Translates to: FMGRFSSTGSLS*MSSTRIPTSIV
Trigger: CACAATGCTGGTGGGGATCCGGGTGCTGGACATCAACGACAACGACCCTGTGCTGCTGAACCTGCCCATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS CAA 90 bp ACAGGCGTGTCCTCGCTGATCAGCAGGTATGTATCAAAGAAGTGGTaGGTGAAGAAGGGCAGCCGGTTCACCTGGCCCCAGCATCCAGAG +
Preference number: 6 (lower is better)
Translates to: TGVSSLISRYVSKKW*VKKGSRFTWPQHPE
Trigger: CTCTGGATGCTGGGGCCAGGTGAACCGGCTGCCCTTCTTCACCAACCACTTCTTTGATACATACCTGCTGATCAGCGAGGACACGCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000442677.4
ENST00000461841.7
ENST00000616684.4
CDS CAA 90 bp ATGTCCAGGAGGGTGATGTTTACGGTGGCGATGCCAGTTTTCTGGTaGTGGCCCACACCCCCGTCCACTGCGCGAACGATGAGGATGTAT +
Preference number: 6 (lower is better)
Translates to: MSRRVMFTVAMPVFW*WPTPPSTARTMRMY
Trigger: ATACATCCTCATCGTTCGCGCAGTGGACGGGGGTGTGGGCCACAACCAGAAAACTGGCATCGCCACCGTAAACATCACCCTCCTGGACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000442677.4
ENST00000466757.8
ENST00000616684.4
CDS CAA 90 bp ATGGTGATGTTCATGGGCAGGTTCAGCAGCACAGGGTCGTTGTCGTaGATGTCCAGCACCCGGATCCCCACCAGCATTGTGGAGCTGAGT +
Preference number: 6 (lower is better)
Translates to: MVMFMGRFSSTGSLS*MSSTRIPTSIVELS
Trigger: ACTCAGCTCCACAATGCTGGTGGGGATCCGGGTGCTGGACATCAACGACAACGACCCTGTGCTGCTGAACCTGCCCATGAACATCACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS TCA 72 bp CCCGGTCCAGCAGGCCATTCAAGGTCAGCACTCCGCTaGTGTAGTCCAGGGCAAAGATGCTGTTGGTATTCC +
Preference number: 6 (lower is better)
Translates to: PGPAGHSRSALR*CSPGQRCCWYS
Trigger: GGAATACCAACAGCATCTTTGCCCTGGACTACATCAGCGGAGTGCTGACCTTGAATGGCCTGCTGGACCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000442677.4
ENST00000461841.7
ENST00000466757.8
ENST00000616684.4
ENST00000643732.1
ENST00000646131.1
CDS TCA 72 bp TCACATCAGAGTCTGGAGGGGTCATCTCCACCAGGTTaGTGTAGTAGGGTGCGTCCTTCCACGTGGGGTGGT +
Preference number: 6 (lower is better)
Translates to: SHQSLEGSSPPG*CSRVRPSTWGG
Trigger: ACCACCCCACGTGGAAGGACGCACCCTACTACATCAACCTGGTGGAGATGACCCCTCCAGACTCTGATGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000442677.4
ENST00000466757.8
ENST00000616684.4
CDS TCA 72 bp TGGCCACAAACACTTCGCCAATGGAGTCATTGGTGGTaGCGATCTCAAAGGCCCCCGCGATGTTGCCAGAGG +
Preference number: 6 (lower is better)
Translates to: WPQTLRQWSHWW*RSQRPPRCCQR
Trigger: CCTCTGGCAACATCGCGGGGGCCTTTGAGATCGTCACCACCAATGACTCCATTGGCGAAGTGTTTGTGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224721.12
ENST00000398792.3
CDS TCA 72 bp GAGAGATCACAAACTCCCCCAGAGGGTCTCCATCCATaGTGCTGTACTCCACCTGCCCGTTGGGTCCTGAGT +
Preference number: 6 (lower is better)
Translates to: ERSQTPPEGLHP*CCTPPARWVLS
Trigger: ACTCAGGACCCAACGGGCAGGTGGAGTACAGCATCATGGATGGAGACCCTCTGGGGGAGTTTGTGATCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS CCA 72 bp CAGGATATTGAAGGTCGTGGTGACTGTAGCGTCAGATaGGGTGCGGTCATCGTTCAGCTCCGTGCCCTTCAC +
Preference number: 6 (lower is better)
Translates to: QDIEGRGDCSVR*GAVIVQLRALH
Trigger: GTGAAGGGCACGGAGCTGAACGATGACCGCACCCCATCTGACGCTACAGTCACCACGACCTTCAATATCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000442677.4
ENST00000461841.7
ENST00000466757.8
ENST00000616684.4
ENST00000643732.1
ENST00000646131.1
CDS CCA 72 bp CTGTTGATCCCGATGTCACGGTCAGTGGCTCTCACCTaGACCACAGCAGTACCTCCACCCACGTTCTCATTC +
Preference number: 6 (lower is better)
Translates to: LLIPMSRSVALT*TTAVPPPTFSF
Trigger: GAATGAGAACGTGGGTGGAGGTACTGCTGTGGTCCAGGTGAGAGCCACTGACCGTGACATCGGGATCAACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224721.12
ENST00000398792.3
CDS CCA 72 bp CCTCCTGGTTGGGCACCAGGCGATCAGTGTCGTCCTTaGCCACAATGCCGACAATGTGGTACTCTAGCTTTG +
Preference number: 6 (lower is better)
Translates to: PPGWAPGDQCRP*PQCRQCGTLAL
Trigger: CAAAGCTAGAGTACCACATTGTCGGCATTGTGGCCAAGGACGACACTGATCGCCTGGTGCCCAACCAGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS CCA 72 bp GATCCTGTGTTGATATTCACAGCAAAGGCGTCCTCCTaGTTGGGCACCAGGCGATCAGTGTCGTCCTTGGCC +
Preference number: 6 (lower is better)
Translates to: DPVLIFTAKASS*LGTRRSVSSLA
Trigger: GGCCAAGGACGACACTGATCGCCTGGTGCCCAACCAGGAGGACGCCTTTGCTGTGAATATCAACACAGGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS CCA 72 bp AACATGCTGTTCAGGCCCTCATCCTTGTCCACCACCTaGATGAAGAGTGGAAGGGCAAAGCCGACCTGTGCC +
Preference number: 6 (lower is better)
Translates to: NMLFRPSSLSTT*MKSGRAKPTCA
Trigger: GGCACAGGTCGGCTTTGCCCTTCCACTCTTCATCCAGGTGGTGGACAAGGATGAGGGCCTGAACAGCATGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470494.5
CDS CAA 72 bp AGACACGCCAAACACCAGGGGGTCATTGTCCATGTCTaGGGCCAGCAACTGGGTCACAGAAGAACCCACAGG +
Preference number: 6 (lower is better)
Translates to: RHAKHQGVIVHV*GQQLGHRRTHR
Trigger: CCTGTGGGTTCTTCTGTGACCCAGTTGCTGGCCCAAGACATGGACAATGACCCCCTGGTGTTTGGCGTGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000442677.4
ENST00000461841.7
ENST00000616684.4
CDS CAA 72 bp CTGTACTGCTGCTGTGTGAACACGGGGGCCTCATCGTaGATGTCCTCCACGTACACAATCACCCTGACGGAG +
Preference number: 6 (lower is better)
Translates to: LYCCCVNTGASS*MSSTYTITLTE
Trigger: CTCCGTCAGGGTGATTGTGTACGTGGAGGACATCAACGATGAGGCCCCCGTGTTCACACAGCAGCAGTACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398809.9
ENST00000616684.4
CDS CAA 72 bp CCTGTGTTGATATTCACAGCAAAGGCGTCCTCCTGGTaGGGCACCAGGCGATCAGTGTCGTCCTTGGCCACA +
Preference number: 6 (lower is better)
Translates to: PVLIFTAKASSW*GTRRSVSSLAT
Trigger: TGTGGCCAAGGACGACACTGATCGCCTGGTGCCCAACCAGGAGGACGCCTTTGCTGTGAATATCAACACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS CAA 72 bp AGACACGCCAAACACCAGGGGGTCATTGTCCATGTCTaGGGCCAGCAACTGGGTCACAGAAGAACCGTGTGC +
Preference number: 6 (lower is better)
Translates to: RHAKHQGVIVHV*GQQLGHRRTVC
Trigger: GCACACGGTTCTTCTGTGACCCAGTTGCTGGCCCAAGACATGGACAATGACCCCCTGGTGTTTGGCGTGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644511.1
CDS CAA 90 bp ACGCTCACTGTCTGGATGGGGTTGAGGAACTCGGGGCGGGAGTCATaGATGTCATCGATCAGAATGGTGACAATGGCTGTGCCCGAGAGA +
Preference number: 6 (lower is better)
Translates to: TLTVWMGLRNSGRES*MSSIRMVTMAVPER
Trigger: TCTCTCGGGCACAGCCATTGTCACCATTCTGATCGATGACATCAATGACTCCCGCCCCGAGTTCCTCAACCCCATCCAGACAGTGAGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS GCA 72 bp TGCTGTTGGTATTCCCTGAAACGATGGTGTAGCCAATaGCCCGGGGACGTCCTTTATCCTGGTCTATGGCGG +
Preference number: 6 (lower is better)
Translates to: CCWYSLKRWCSQ*PGDVLYPGLWR
Trigger: CCGCCATAGACCAGGATAAAGGACGTCCCCGGGGCATTGGCTACACCATCGTTTCAGGGAATACCAACAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000442677.4
ENST00000461841.7
ENST00000466757.8
ENST00000616684.4
ENST00000643732.1
ENST00000646131.1
CDS GCA 72 bp ATCCACGTTGCCACCTGTGATGAAGTAGCTGAGCTCTaGATTGAGGCCCACGTCGTTGTCCGTGCAGTTCAG +
Preference number: 6 (lower is better)
Translates to: IHVATCDEVAEL*IEAHVVVRAVQ
Trigger: CTGAACTGCACGGACAACGACGTGGGCCTCAATGCAGAGCTCAGCTACTTCATCACAGGTGGCAACGTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398809.9
ENST00000442677.4
ENST00000466757.8
ENST00000616684.4
CDS GCA 72 bp CTTCAGGGATGTCCTCAGGGACGCTGGCCTCATAGCTaGTCTGCAGAAAGATGGGCCGGTTGTCATTCACAT +
Preference number: 6 (lower is better)
Translates to: LQGCPQGRWPHS*SAERWAGCHSH
Trigger: ATGTGAATGACAACCGGCCCATCTTTCTGCAGAGCAGCTATGAGGCCAGCGTCCCTGAGGACATCCCTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000224721.12
ENST00000398792.3
ENST00000398809.9
ENST00000442677.4
ENST00000466757.8
ENST00000616684.4
CDS GCA 72 bp GGTGGGAGTTGTTCCCCACCAAGTACACCTCAAACATaGTGTTCAGGCCCTCATCCTTGTCCACCACCTGGA +
Preference number: 6 (lower is better)
Translates to: GGSCSPPSTPQT*CSGPHPCPPPG
Trigger: TCCAGGTGGTGGACAAGGATGAGGGCCTGAACAGCATGTTTGAGGTGTACTTGGTGGGGAACAACTCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470494.5
CDS CCA 72 bp GCACAATCTCAGTACCCAGTGCCAGATTCTCCAGGATaGCAGCCTCGTATGAGGCATTGGAGAACTGCACGG +
Preference number: 6 (lower is better)
Translates to: AQSQYPVPDSPG*QPRMRHWRTAR
Trigger: CCGTGCAGTTCTCCAATGCCTCATACGAGGCTGCCATCCTGGAGAATCTGGCACTGGGTACTGAGATTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224721.12
ENST00000398792.3
ENST00000398809.9
ENST00000616684.4
CDS CCA 72 bp GGATGTAGTGATCCAGCTCTTCTCTGTCCAGGGGCCTaGCCACAAACACTTCGCCAATGGAGTCATTGGTGG +
Preference number: 6 (lower is better)
Translates to: GCSDPALLCPGA*PQTLRQWSHWW
Trigger: CCACCAATGACTCCATTGGCGAAGTGTTTGTGGCCAGGCCCCTGGACAGAGAAGAGCTGGATCACTACATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224721.12
ENST00000398792.3
CDS CAA 72 bp TCCAGCCTGGCAATCAGCATGATGAGTCCCGTGTCCTaGTCCAGCGAGAACCTGTCAGGGTCATCACTGAAG +
Preference number: 6 (lower is better)
Translates to: SSLAISMMSPVS*SSENLSGSSLK
Trigger: CTTCAGTGATGACCCTGACAGGTTCTCGCTGGACAAGGACACGGGACTCATCATGCTGATTGCCAGGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000442677.4
ENST00000466757.8
ENST00000616684.4
CDS CAA 72 bp CGCATCAGGAGCCCATTGCTGACATGGATCCGGAAGTaGTTGCCATGGTTACCATGGAGGATGCGGTACCAC +
Preference number: 6 (lower is better)
Translates to: RIRSPLLTWIRK*LPWLPWRMRYH
Trigger: GTGGTACCGCATCCTCCATGGTAACCATGGCAACAACTTCCGGATCCATGTCAGCAATGGGCTCCTGATGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398809.9
ENST00000616684.4
CDS TCA 72 bp TGTTCTCCACCACGGAGACGAAGTAGGCGGGCTTGCTaGAGGTGGGAGGGTTGTCATTCTCATCAAACACCT +
Preference number: 6 (lower is better)
Translates to: CSPPRRRSRRAC*RWEGCHSHQTP
Trigger: AGGTGTTTGATGAGAATGACAACCCTCCCACCTTCAGCAAGCCCGCCTACTTCGTCTCCGTGGTGGAGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000442677.4
ENST00000466757.8
ENST00000616684.4
CDS TCA 72 bp CCCTGGCTCTCTTCTCAACTCCTTTCCGGGAAATTGTaGCGTCTCTTTCTCCCCGCTACTCTGAAAGGCCCT +
Preference number: 6 (lower is better)
Translates to: PWLSSQLLSGKL*RLFLPATLKGP
Trigger: AGGGCCTTTCAGAGTAGCGGGGAGAAAGAGACGTCACAATTTCCCGGAAAGGAGTTGAGAAGAGAGCCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS GCA 72 bp GGTGTATTCTGCACATCTGTCCTCTCTTCCATCTGGTaGCAGCATAGGACCGTTGGCTCGCAGCTCAGTAAC +
Preference number: 6 (lower is better)
Translates to: GVFCTSVLSSIW*QHRTVGSQLSN
Trigger: GTTACTGAGCTGCGAGCCAACGGTCCTATGCTGGCACCAGATGGAAGAGAGGACAGATGTGCAGAATACACC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643732.1
CDS CCA 72 bp GAGTGTGATCCCTCCCCGGCATACCAGAATCACAATTaGTTCCAGGATGACACAACCAACTGGGCCGATGAG +
Preference number: 6 (lower is better)
Translates to: ECDPSPAYQNHN*FQDDTTNWADE
Trigger: CTCATCGGCCCAGTTGGTTGTGTCATCCTGGAACCAATTGTGATTCTGGTATGCCGGGGAGGGATCACACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS CCA 72 bp ACTGGTGTATTCTGCACATCTGTCCTCTCTTCCATCTaGTGCCAGCATAGGACCGTTGGCTCGCAGCTCAGT +
Preference number: 6 (lower is better)
Translates to: TGVFCTSVLSSI*CQHRTVGSQLS
Trigger: ACTGAGCTGCGAGCCAACGGTCCTATGCTGGCACCAGATGGAAGAGAGGACAGATGTGCAGAATACACCAGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643732.1
CDS CAA 72 bp TGGACGGAGGTCGGGGAGATGATGAAGTGGTGGGAGTaGTTCCCCACCAAGTACACCTCAAACATGCTGTTC +
Preference number: 6 (lower is better)
Translates to: WTEVGEMMKWWE*FPTKYTSNMLF
Trigger: GAACAGCATGTTTGAGGTGTACTTGGTGGGGAACAACTCCCACCACTTCATCATCTCCCCGACCTCCGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000442677.4
ENST00000461841.7
ENST00000466757.8
ENST00000470494.5
ENST00000616684.4
ENST00000643732.1
ENST00000646131.1
CDS CAA 72 bp CCGTCCACTGCGCGAACGATGAGGATGTATTCAGACTaGGTCTCTCGGTCAAGCAGAGACGTGGTGGTGATT +
Preference number: 6 (lower is better)
Translates to: PSTARTMRMYSD*VSRSSRDVVVI
Trigger: AATCACCACCACGTCTCTGCTTGACCGAGAGACCAAGTCTGAATACATCCTCATCGTTCGCGCAGTGGACGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000442677.4
ENST00000466757.8
ENST00000616684.4
CDS CAA 72 bp CTGTACTGCTGCTGTGTGAACACGGGGGCCTCATCGTaGATGTCCTCCACGTACACAATCACCATGGAGGAT +
Preference number: 6 (lower is better)
Translates to: LYCCCVNTGASS*MSSTYTITMED
Trigger: ATCCTCCATGGTGATTGTGTACGTGGAGGACATCAACGATGAGGCCCCCGTGTTCACACAGCAGCAGTACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398792.3
CDS CAA 72 bp GTGCACACAGAAGGAGCTCAACCAATGTTGGTTAGATaGGAAGAAATGGTGCTCCCTGCCCCCAGCCCCTCA +
Preference number: 6 (lower is better)
Translates to: VHTEGAQPMLVR*EEMVLPAPSPS
Trigger: TGAGGGGCTGGGGGCAGGGAGCACCATTTCTTCCAATCTAACCAACATTGGTTGAGCTCCTTCTGTGTGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
CDS CAA 90 bp ATTACAGATCCTGTGTTGATATTCACAGCAAAGGCGTCCTCCTGGTaGGGCACCAGGCGATCAGTGTCGTCCTTGGCCACAATGCCGACA +
Preference number: 6 (lower is better)
Translates to: ITDPVLIFTAKASSW*GTRRSVSSLATMPT
Trigger: TGTCGGCATTGTGGCCAAGGACGACACTGATCGCCTGGTGCCCAACCAGGAGGACGCCTTTGCTGTGAATATCAACACAGGATCTGTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS GCA 72 bp GGTGGGAGTTGTTCCCCACCAAGTACACCTCAAACATaGTGTTCAGGCCCAAATTCTGCACGTGCAGACCTT +
Preference number: 6 (lower is better)
Translates to: GGSCSPPSTPQT*CSGPNSARADL
Trigger: AAGGTCTGCACGTGCAGAATTTGGGCCTGAACAGCATGTTTGAGGTGTACTTGGTGGGGAACAACTCCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466757.8
ENST00000643732.1
CDS CCA 72 bp CGATCAGTGTCGTCCTTGGCCACAATGCCGACAATGTaGTACTCTAGCTTTGGGTTGAGGTCGTGGTCAATG +
Preference number: 6 (lower is better)
Translates to: RSVSSLATMPTM*YSSFGLRSWSM
Trigger: CATTGACCACGACCTCAACCCAAAGCTAGAGTACCACATTGTCGGCATTGTGGCCAAGGACGACACTGATCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS CAA 72 bp GCAGTACCTCCACCCACGTTCTCATTCACACTGACATaGTATCCAAAGGGGCTCTCGATGACTGGAGGGTTG +
Preference number: 6 (lower is better)
Translates to: AVPPPTFSFTLT*YPKGLSMTGGL
Trigger: CAACCCTCCAGTCATCGAGAGCCCCTTTGGATACAATGTCAGTGTGAATGAGAACGTGGGTGGAGGTACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224721.12
ENST00000398792.3
CDS CAA 90 bp TCGTCCTTGGCCACAATGCCGACAATGTGGTACTCTAGCTTTGGGTaGAGGTCGTGGTCAATGGCCGTGATATTGGCAATGACAGTGCCT +
Preference number: 6 (lower is better)
Translates to: SSLATMPTMWYSSFG*RSWSMAVILAMTVP
Trigger: AGGCACTGTCATTGCCAATATCACGGCCATTGACCACGACCTCAACCCAAAGCTAGAGTACCACATTGTCGGCATTGTGGCCAAGGACGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS TCA 72 bp ATGCCTTCAAGCACCTCGGCCACAAAAGGCAGGTTCTaGAAGGTGGGGTCATTGTCATTGAGATCCAAGAGG +
Preference number: 6 (lower is better)
Translates to: MPSSTSATKGRF*KVGSLSLRSKR
Trigger: CCTCTTGGATCTCAATGACAATGACCCCACCTTTCAGAACCTGCCTTTTGTGGCCGAGGTGCTTGAAGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000442677.4
ENST00000466757.8
ENST00000616684.4
CDS GCA 72 bp GGTGGGAGTTGTTCCCCACCAAGTACACCTCAAACATaGTGTTCAGGCCCAAATTCTCATCCTTGTCCACCA +
Preference number: 6 (lower is better)
Translates to: GGSCSPPSTPQT*CSGPNSHPCPP
Trigger: TGGTGGACAAGGATGAGAATTTGGGCCTGAACAGCATGTTTGAGGTGTACTTGGTGGGGAACAACTCCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000442677.4
ENST00000461841.7
ENST00000616684.4
ENST00000646131.1
CDS GCA 72 bp GTACAGGCTGATGTCGAAGTAGCTGCCAAAGGCAGATaGACTGACAATGCTGTAGGTGATCTGGTTGTTGGG +
Preference number: 6 (lower is better)
Translates to: VQADVEVAAKGR*TDNAVGDLVVG
Trigger: CCCAACAACCAGATCACCTACAGCATTGTCAGTGCATCTGCCTTTGGCAGCTACTTCGACATCAGCCTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000224721.12
ENST00000299366.11
ENST00000398809.9
ENST00000442677.4
ENST00000466757.8
ENST00000616684.4
CDS CCA 72 bp CCGACAATGTGGTACTCTAGCTTTGGGTTGAGGTCGTaGTCAATGGCCGTGATATTGGCAATGACAGTGCCT +
Preference number: 6 (lower is better)
Translates to: PTMWYSSFGLRS*SMAVILAMTVP
Trigger: AGGCACTGTCATTGCCAATATCACGGCCATTGACCACGACCTCAACCCAAAGCTAGAGTACCACATTGTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS CAA 72 bp GCCACAATGCCGACAATGTGGTACTCTAGCTTTGGGTaGAGGTCGTGGTCAATGGCCGTGATATTGGCAATG +
Preference number: 6 (lower is better)
Translates to: ATMPTMWYSSFG*RSWSMAVILAM
Trigger: CATTGCCAATATCACGGCCATTGACCACGACCTCAACCCAAAGCTAGAGTACCACATTGTCGGCATTGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS CAA 72 bp CTTTATTTAATACACCAACAAACACAGCTCAGGGATTaGGGGGTGCCTCCTTCCCTGATTGCTGAGGTCCCT +
Preference number: 6 (lower is better)
Translates to: LYLIHQQTQLRD*GVPPSLIAEVP
Trigger: AGGGACCTCAGCAATCAGGGAAGGAGGCACCCCCAAATCCCTGAGCTGTGTTTGTTGGTGTATTAAATAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461841.7
ENST00000643732.1
CDS GCA 72 bp TCCAGGATGACACAACCAACTGGGCCGATGAGAATCTaGTGGAATTACTGCAAAAGAACTTTTCCCACAGGA +
Preference number: 6 (lower is better)
Translates to: SRMTQPTGPMRI*WNYCKRTFPTG
Trigger: TCCTGTGGGAAAAGTTCTTTTGCAGTAATTCCAGCAGATTCTCATCGGCCCAGTTGGTTGTGTCATCCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS CCA 72 bp AGGATGACACAACCAACTGGGCCGATGAGAATCTGCTaGAATTACTGCAAAAGAACTTTTCCCACAGGACTG +
Preference number: 6 (lower is better)
Translates to: RMTQPTGPMRIC*NYCKRTFPTGL
Trigger: CAGTCCTGTGGGAAAAGTTCTTTTGCAGTAATTCCAGCAGATTCTCATCGGCCCAGTTGGTTGTGTCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470494.5
ENST00000646131.1
CDS CAA 90 bp GTCCAAAAACTTTATTTAATACACCAACAAACACAGCTCAGGGATTaGGGGGTGCCTCCTTCCCTGATTGCTGAGGTCCCTTGGACAAAA +
Preference number: 6 (lower is better)
Translates to: VQKLYLIHQQTQLRD*GVPPSLIAEVPWTK
Trigger: TTTTGTCCAAGGGACCTCAGCAATCAGGGAAGGAGGCACCCCCAAATCCCTGAGCTGTGTTTGTTGGTGTATTAAATAAAGTTTTTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000461841.7
ENST00000643732.1