RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDH22 (Homo sapiens)

Ensembl gene IDs: ENSG00000149654

Ensembl transcript IDs: ENST00000474438.1, ENST00000537909.4

Found 261 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCGAGGCCAGGCAGCTGGTCAGTGCCAGAGGCTCTGCCATTCACTaGCCAGGTGCCCTTGGACGGGTCACAGCCACTTCTCTGGGGTCC +
Preference number: 1 (lower is better)
Translates to: PEARQLVSARGSAIH*PGALGRVTATSLGS
Trigger: GGACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGCACCTGGCCAGTGAATGGCAGAGCCTCTGGCACTGACCAGCTGCCTGGCCTCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
3UTR GCA 90 bp CAGGCAGCTGGTCAGTGCCAGAGGCTCTGCCATTCACTGGCCAGGTaGCCTTGGACGGGTCACAGCCACTTCTCTGGGGTCCTTTCCCCT +
Preference number: 1 (lower is better)
Translates to: QAAGQCQRLCHSLAR*PWTGHSHFSGVLSP
Trigger: AGGGGAAAGGACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGCACCTGGCCAGTGAATGGCAGAGCCTCTGGCACTGACCAGCTGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
3UTR CCA 90 bp GCTGGTCAGTGCCAGAGGCTCTGCCATTCACTGGCCAGGTGCCCTTaGACGGGTCACAGCCACTTCTCTGGGGTCCTTTCCCCTTCTATT +
Preference number: 1 (lower is better)
Translates to: AGQCQRLCHSLARCP*TGHSHFSGVLSPSI
Trigger: AATAGAAGGGGAAAGGACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGCACCTGGCCAGTGAATGGCAGAGCCTCTGGCACTGACCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
3UTR CCA 90 bp GTAAGTGAACAGCCTTCTTTCCTCTTAACTCTGATGGGGGAAACCTaGGGTGGGGGCATCTCAGCGGCGTGCTCCCTCCAGCATTCTCCC +
Preference number: 1 (lower is better)
Translates to: VSEQPSFLLTLMGET*GGGISAACSLQHSP
Trigger: GGGAGAATGCTGGAGGGAGCACGCCGCTGAGATGCCCCCACCCCAGGTTTCCCCCATCAGAGTTAAGAGGAAAGAAGGCTGTTCACTTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000537909.4
3UTR-3UTR CCA 90 bp CCCGGTCTCGCCTCAGTTTTAATGCCGTTGGTCAGAATCCCGCACCTCTGGGCTGGAAACGCGTTGTCCTaGGGCCCCGGCGTGTGCTGG +
Preference number: 2 (lower is better)
Translates to: PGLASVLMPLVRIPHLWAGNALS*GPGVCW
Trigger: CCAGCACACGCCGGGGCCCCAGGACAACGCGTTTCC...AGCCCAGAGGTGCGGGATTCTGACCAACGGCATTAAAACTGAGGCGAGACCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
3UTR-3UTR TCA 90 bp GACGGGTCACAGCCACTTCTCTGGGGTCCTTTCCCCTTCTATTCCGTGCAGGACCAGGCCAGGATTGAGTaGCCCGCCCCTTCCCGACTC +
Preference number: 2 (lower is better)
Translates to: DGSQPLLWGPFPFYSVQDQARIE*PAPSRL
Trigger: GAGTCGGGAAGGGGCGGGTCACTCAATCCTGGCCTG...GTCCTGCACGGAATAGAAGGGGAAAGGACCCCAGAGAAGTGGCTGTGACCCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537909.4
3UTR-3UTR GCA 90 bp TCACTGGCCAGGTGCCCTTGGACGGGTCACAGCCACTTCTCTGGGGTCCTTTCCTCTGGGCTCCAAAGCTaGACCCCTAGAGGAGGAGGA +
Preference number: 2 (lower is better)
Translates to: SLARCPWTGHSHFSGVLSSGLQS*TPRGGG
Trigger: TCCTCCTCCTCTAGGGGTGCAGCTTTGGAGCCCAGA...GGAAAGGACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGCACCTGGCCAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
3UTR-3UTR GCA 90 bp GACGGGTCACAGCCACTTCTCTGGGGTCCTTTCCCCTTCTATTCCGTGCAGGACCCCAGAGCCACACCGTaGCCGGTCTCGCCTCAGTTT +
Preference number: 2 (lower is better)
Translates to: DGSQPLLWGPFPFYSVQDPRATP*PVSPQF
Trigger: AAACTGAGGCGAGACCGGGCACGGTGTGGCTCTGGG...GTCCTGCACGGAATAGAAGGGGAAAGGACCCCAGAGAAGTGGCTGTGACCCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537909.4
3UTR CAA 90 bp AGCTGGTCAGTGCCAGAGGCTCTGCCATTCACTGGCCAGGTGCCCTaGGACGGGTCACAGCCACTTCTCTGGGGTCCTTTCCCCTTCTAT +
Preference number: 2 (lower is better)
Translates to: SWSVPEALPFTGQVP*DGSQPLLWGPFPFY
Trigger: ATAGAAGGGGAAAGGACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGCACCTGGCCAGTGAATGGCAGAGCCTCTGGCACTGACCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
3UTR-3UTR CCA 90 bp TGCCCTTGGACGGGTCACAGCCACTTCTCTGGGGTCCTTTCCCCTTCTATTCCGAGAATCCCGCACCTCTaGGCTCCAAAGCTGCACCCC +
Preference number: 2 (lower is better)
Translates to: CPWTGHSHFSGVLSPSIPRIPHL*APKLHP
Trigger: GGGGTGCAGCTTTGGAGCCCAGAGGTGCGGGATTCT...CGGAATAGAAGGGGAAAGGACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
3UTR-3UTR CCA 90 bp TGCCATTCACTGGCCAGGTGCCCTTGGACGGGTCACAGCCACTTCTCTGGGGTCCTAGAGGAGGAGGAATaGAAGAGTCCGCTCCTAGCA +
Preference number: 2 (lower is better)
Translates to: CHSLARCPWTGHSHFSGVLEEEE*KSPLLA
Trigger: TGCTAGGAGCGGACTCTTCCATTCCTCCTCCTCTAG...GACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGCACCTGGCCAGTGAATGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
3UTR-3UTR CCA 90 bp GGGTCCTTTCCCCTTCTATTCCGTGCAGGACACCACCTCATGGTTTCTCTGACGCTGATGGGGGAAACCTaGGGTGGGGGCATCTCAGCG +
Preference number: 2 (lower is better)
Translates to: GSFPLLFRAGHHLMVSLTLMGET*GGGISA
Trigger: CGCTGAGATGCCCCCACCCCAGGTTTCCCCCATCAG...CGTCAGAGAAACCATGAGGTGGTGTCCTGCACGGAATAGAAGGGGAAAGGACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000537909.4
3UTR-3UTR GCA 90 bp GTCCTTTCCCCTTCTATTCCGTGCAGGACACCACCTCATGGTTTCTCTGACGACGGCATCTCAGCGGCGTaGTCCCTCCAGCATTCTCCC +
Preference number: 2 (lower is better)
Translates to: VLSPSIPCRTPPHGFSDDGISAA*SLQHSP
Trigger: GGGAGAATGCTGGAGGGAGCACGCCGCTGAGATGCC...GTCGTCAGAGAAACCATGAGGTGGTGTCCTGCACGGAATAGAAGGGGAAAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
3UTR-3UTR GCA 90 bp TTTCCCCTTCTATTCCGTGCAGGACACCACCTCATGGTTTCTCTGACGACTGAGCCAGCACACAGTAGGTaGTTAGTAAGTGAACAGCCT +
Preference number: 2 (lower is better)
Translates to: FPLLFRAGHHLMVSLTTEPAHSR*LVSEQP
Trigger: AGGCTGTTCACTTACTAAGCACCTACTGTGTGCTGG...CTCAGTCGTCAGAGAAACCATGAGGTGGTGTCCTGCACGGAATAGAAGGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
3UTR-3UTR CAA 90 bp TGCCATTCACTGGCCAGGTGCCCTTGGACGGGTCACAGCCACTTCTCTGGGGTCTCCCCCAGGCCAGGATaGAGTGACCCGCCCCTTCCC +
Preference number: 3 (lower is better)
Translates to: CHSLARCPWTGHSHFSGVSPRPG*SDPPLP
Trigger: GGGAAGGGGCGGGTCACTCAATCCTGGCCTGGGGGA...GACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGCACCTGGCCAGTGAATGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537909.4
3UTR GCA 72 bp GGTCAGTGCCAGAGGCTCTGCCATTCACTGGCCAGGTaGCCTTGGACGGGTCACAGCCACTTCTCTGGGGTC +
Preference number: 3 (lower is better)
Translates to: GQCQRLCHSLAR*PWTGHSHFSGV
Trigger: GACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGCACCTGGCCAGTGAATGGCAGAGCCTCTGGCACTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
3UTR CCA 72 bp GGCCAGGTGCCCTTGGACGGGTCACAGCCACTTCTCTaGGGTCCTTTCCCCTTCTATTCCGTGCAGGACACC +
Preference number: 3 (lower is better)
Translates to: GQVPLDGSQPLL*GPFPFYSVQDT
Trigger: GGTGTCCTGCACGGAATAGAAGGGGAAAGGACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGCACCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
3UTR CCA 72 bp TGCCAGAGGCTCTGCCATTCACTGGCCAGGTGCCCTTaGACGGGTCACAGCCACTTCTCTGGGGTCCTTTCC +
Preference number: 3 (lower is better)
Translates to: CQRLCHSLARCP*TGHSHFSGVLS
Trigger: GGAAAGGACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGCACCTGGCCAGTGAATGGCAGAGCCTCTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
3UTR CCA 72 bp AGGCAGCTGGTCAGTGCCAGAGGCTCTGCCATTCACTaGCCAGGTGCCCTTGGACGGGTCACAGCCACTTCT +
Preference number: 3 (lower is better)
Translates to: RQLVSARGSAIH*PGALGRVTATS
Trigger: AGAAGTGGCTGTGACCCGTCCAAGGGCACCTGGCCAGTGAATGGCAGAGCCTCTGGCACTGACCAGCTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537909.4
3UTR CCA 72 bp CAGCCTTCTTTCCTCTTAACTCTGATGGGGGAAACCTaGGGTGGGGGCATCTCAGCGGCGTGCTCCCTCCAG +
Preference number: 3 (lower is better)
Translates to: QPSFLLTLMGET*GGGISAACSLQ
Trigger: CTGGAGGGAGCACGCCGCTGAGATGCCCCCACCCCAGGTTTCCCCCATCAGAGTTAAGAGGAAAGAAGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000537909.4
3UTR-3UTR CAA 90 bp GCCCTTGGACGGGTCACAGCCACTTCTCTGGGGTCCTTTCCCCTTCTATTCCGTTCAGTTTTAATGCCGTaGGTCAGAATCCCGCACCTC +
Preference number: 3 (lower is better)
Translates to: ALGRVTATSLGSFPLLFRSVLMP*VRIPHL
Trigger: GAGGTGCGGGATTCTGACCAACGGCATTAAAACTGA...ACGGAATAGAAGGGGAAAGGACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CCA 90 bp GTTGGTCAGAATCCCGCACCTCTGGGCTCCAAAGCTGCACCCCTAGAGGAGGAGCCTCGGCCTCATCCTTaGCCTGCGCGGGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: VGQNPAPLGSKAAPLEEEPRPHP*PARGWG
Trigger: GCCCCAGCCCCGCGCAGGCCAAGGATGAGGCCGAGG...CTCCTCCTCTAGGGGTGCAGCTTTGGAGCCCAGAGGTGCGGGATTCTGACCAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR TCA 90 bp TCAGAATCCCGCACCTCTGGGCTCCAAAGCTGCACCCCTAGAGGAGGAGGAATGACACCCAGCCGCGTTTaGCGCGGCCGGCTCCCAGCG +
Preference number: 4 (lower is better)
Translates to: SESRTSGLQSCTPRGGGMTPSRV*RGRLPA
Trigger: CGCTGGGAGCCGGCCGCGTCAAACGCGGCTGGGTGT...CATTCCTCCTCCTCTAGGGGTGCAGCTTTGGAGCCCAGAGGTGCGGGATTCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR TCA 90 bp CGTGCCCGGTCTCGCCTCAGTTTTAATGCCGTTGGTCAGAATCCCGCACCTCTGCGCTGTGCAGGGAGCTaGGCGAGGCGGCCGGCGAGT +
Preference number: 4 (lower is better)
Translates to: RARSRLSFNAVGQNPAPLRCAGS*ARRPAS
Trigger: ACTCGCCGGCCGCCTCGCTCAGCTCCCTGCACAGCG...CAGAGGTGCGGGATTCTGACCAACGGCATTAAAACTGAGGCGAGACCGGGCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR GCA 90 bp CGTGCCCGGTCTCGCCTCAGTTTTAATGCCGTTGGTCAGAATCCCGCACCTCTGCGAGGGTGTGCCCGCTaGCCACAGGCGCCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: RARSRLSFNAVGQNPAPLRGCAR*PQAPQQ
Trigger: CTGCTGGGGCGCCTGTGGGCAGCGGGCACACCCTCG...CAGAGGTGCGGGATTCTGACCAACGGCATTAAAACTGAGGCGAGACCGGGCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR GCA 90 bp CCATTCACTGGCCAGGTGCCCTTGGACGGGTCACAGCCACTTCTCTGGGGTCCTCGCGGTCCAGCCCCTTaGCAGTCACGATGGCGCCTG +
Preference number: 4 (lower is better)
Translates to: PFTGQVPLDGSQPLLWGPRGPAP*QSRWRL
Trigger: CAGGCGCCATCGTGACTGGCAAGGGGCTGGACCGCG...AGGACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGCACCTGGCCAGTGAATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CCA 90 bp TGCCCTTGGACGGGTCACAGCCACTTCTCTGGGGTCCTTTCCCCTTCTATTCCGCGCCGTGTCACATGGTaGCCTCAGCGCGGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: CPWTGHSHFSGVLSPSIPRRVTW*PQRGRR
Trigger: CCGGCGGCCGCGCTGAGGCCACCATGTGACACGGCG...CGGAATAGAAGGGGAAAGGACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CCA 90 bp CCATTCACTGGCCAGGTGCCCTTGGACGGGTCACAGCCACTTCTCTGGGGTCCTCCAGTAGGCGGTTGGTaGCGCGATCCCGAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: PFTGQVPLDGSQPLLWGPPVGGW*RDPEPG
Trigger: CCCAGGCTCGGGATCGCGCCACCAACCGCCTACTGG...AGGACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGCACCTGGCCAGTGAATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR GCA 90 bp GTTGGTCAGAATCCCGCACCTCTGGGCTCCAAAGCTGCACCCCTAGAGGAGGAGACCAGGGAGCCCACCTaGGCGTCCTCCTGCACCTCC +
Preference number: 4 (lower is better)
Translates to: VGQNPAPLGSKAAPLEEETREPT*ASSCTS
Trigger: GGAGGTGCAGGAGGACGCGCAGGTGGGCTCCCTGGT...CTCCTCCTCTAGGGGTGCAGCTTTGGAGCCCAGAGGTGCGGGATTCTGACCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR GCA 90 bp GTTGGTCAGAATCCCGCACCTCTGGGCTCCAAAGCTGCACCCCTAGAGGAGGAGCCAGCCGAGCGCTGCTaGCGTACGTGGGGTCATCCG +
Preference number: 4 (lower is better)
Translates to: VGQNPAPLGSKAAPLEEEPAERC*RTWGHP
Trigger: CGGATGACCCCACGTACGGCAGCAGCGCTCGGCTGG...CTCCTCCTCTAGGGGTGCAGCTTTGGAGCCCAGAGGTGCGGGATTCTGACCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR GCA 90 bp AGGCCAGGATTGAGTGACCCGCCCCTTCCCGACTCTGCAACGCCACCCCCATCTACACCAGCCGAGCGCTaGTGCCGTACGTGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: RPGLSDPPLPDSATPPPSTPAER*CRTWGH
Trigger: ATGACCCCACGTACGGCAGCAGCGCTCGGCTGGTGT...AGATGGGGGTGGCGTTGCAGAGTCGGGAAGGGGCGGGTCACTCAATCCTGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR GCA 90 bp AGGCCAGGATTGAGTGACCCGCCCCTTCCCGACTCTGCAACGCCACCCCCATCTTCCACGGTGAAGTGGTaGTCGCCGTCCAGCACGCTG +
Preference number: 4 (lower is better)
Translates to: RPGLSDPPLPDSATPPPSSTVKW*SPSSTL
Trigger: CAGCGTGCTGGACGGCGAGCACCACTTCACCGTGGA...AGATGGGGGTGGCGTTGCAGAGTCGGGAAGGGGCGGGTCACTCAATCCTGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR GCA 90 bp AGGCCAGGATTGAGTGACCCGCCCCTTCCCGACTCTGCAACGCCACCCCCATCTCGGTTGAAGCCCACGTaGTGCGTGTGCACTGCAGCG +
Preference number: 4 (lower is better)
Translates to: RPGLSDPPLPDSATPPPSRLKPT*CVCTAA
Trigger: CGCTGCAGTGCACACGCAGCACGTGGGCTTCAACCG...AGATGGGGGTGGCGTTGCAGAGTCGGGAAGGGGCGGGTCACTCAATCCTGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR GCA 90 bp GACGGGTCACAGCCACTTCTCTGGGGTCCTTTCCCCTTCTATTCCGTGCAGGACCCCGACGAGCCGCTGTaGAGGGAGCTGAGCGAGGCG +
Preference number: 4 (lower is better)
Translates to: DGSQPLLWGPFPFYSVQDPDEPL*RELSEA
Trigger: CGCCTCGCTCAGCTCCCTGCACAGCGGCTCGTCGGG...GTCCTGCACGGAATAGAAGGGGAAAGGACCCCAGAGAAGTGGCTGTGACCCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR TCA 90 bp CCCGGTCTCGCCTCAGTTTTAATGCCGTTGGTCAGAATCCCGCACCTCTGGGCTGAGAGGCCACCCAGCTaGCCCGCCATGTCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: PGLASVLMPLVRIPHLWAERPPS*PAMSVA
Trigger: GGCCACAGACATGGCGGGTCAGCTGGGTGGCCTCTC...AGCCCAGAGGTGCGGGATTCTGACCAACGGCATTAAAACTGAGGCGAGACCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR TCA 90 bp CGTGCCCGGTCTCGCCTCAGTTTTAATGCCGTTGGTCAGAATCCCGCACCTCTGCGACGTGCCTGTAGGTaGGAGCTCGGCCACGCTGCC +
Preference number: 4 (lower is better)
Translates to: RARSRLSFNAVGQNPAPLRRACR*ELGHAA
Trigger: GGCAGCGTGGCCGAGCTCTCACCTACAGGCACGTCG...CAGAGGTGCGGGATTCTGACCAACGGCATTAAAACTGAGGCGAGACCGGGCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR TCA 90 bp TCACTGGCCAGGTGCCCTTGGACGGGTCACAGCCACTTCTCTGGGGTCCTTTCCGCGGACCCCAGCTGCTaGGATAGGCGAAGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: SLARCPWTGHSHFSGVLSADPSC*DRRSPA
Trigger: AGCAGGACTTCGCCTATCTCAGCAGCTGGGGTCCGC...GGAAAGGACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGCACCTGGCCAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR GCA 90 bp GACGGGTCACAGCCACTTCTCTGGGGTCCTTTCCCCTTCTATTCCGTGCAGGACACCTGCGCGTCCTCCTaGACCTCCAGGAGGCCGGAG +
Preference number: 4 (lower is better)
Translates to: DGSQPLLWGPFPFYSVQDTCASS*TSRRPE
Trigger: CTCCGGCCTCCTGGAGGTGCAGGAGGACGCGCAGGT...GTCCTGCACGGAATAGAAGGGGAAAGGACCCCAGAGAAGTGGCTGTGACCCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR GCA 90 bp CCATTCACTGGCCAGGTGCCCTTGGACGGGTCACAGCCACTTCTCTGGGGTCCTAGCACTGTGATGTTGTaGCAGCCGGCCGTCTCGCGG +
Preference number: 4 (lower is better)
Translates to: PFTGQVPLDGSQPLLWGPSTVML*QPAVSR
Trigger: CCGCGAGACGGCCGGCTGGCACAACATCACAGTGCT...AGGACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGCACCTGGCCAGTGAATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR GCA 90 bp TGCCATTCACTGGCCAGGTGCCCTTGGACGGGTCACAGCCACTTCTCTGGGGTCGGCATCTCAGCGGCGTaGTCCCTCCAGCATTCTCCC +
Preference number: 4 (lower is better)
Translates to: CHSLARCPWTGHSHFSGVGISAA*SLQHSP
Trigger: GGGAGAATGCTGGAGGGAGCACGCCGCTGAGATGCC...GACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGCACCTGGCCAGTGAATGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CCA 90 bp AGGCCAGGATTGAGTGACCCGCCCCTTCCCGACTCTGCAACGCCACCCCCATCTCCACAGCCGTTCCAATaGGGGCTGACTCCTGGATGC +
Preference number: 4 (lower is better)
Translates to: RPGLSDPPLPDSATPPPSPQPFQ*GLTPGC
Trigger: GCATCCAGGAGTCAGCCCCCATTGGAACGGCTGTGG...AGATGGGGGTGGCGTTGCAGAGTCGGGAAGGGGCGGGTCACTCAATCCTGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CCA 90 bp CGTGCCCGGTCTCGCCTCAGTTTTAATGCCGTTGGTCAGAATCCCGCACCTCTGACGCGCACGATCGCCTaGTCGCGGAACGTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RARSRLSFNAVGQNPAPLTRTIA*SRNVPR
Trigger: CCTGGGCACGTTCCGCGACCAGGCGATCGTGCGCGT...CAGAGGTGCGGGATTCTGACCAACGGCATTAAAACTGAGGCGAGACCGGGCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CCA 90 bp GGGTCCTTTCCCCTTCTATTCCGTGCAGGACACCACCTCATGGTTTCTCTGACGCGGCGCCGTGTCACATaGTGGCCTCAGCGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: GSFPLLFRAGHHLMVSLTRRRVT*WPQRGR
Trigger: GCGGCCGCGCTGAGGCCACCATGTGACACGGCGCCG...CGTCAGAGAAACCATGAGGTGGTGTCCTGCACGGAATAGAAGGGGAAAGGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CCA 90 bp CGTGCCCGGTCTCGCCTCAGTTTTAATGCCGTTGGTCAGAATCCCGCACCTCTGTGGGGCCCAGGAGCATaGACGAGAGGCACCAGGGCG +
Preference number: 4 (lower is better)
Translates to: RARSRLSFNAVGQNPAPLWGPGA*TRGTRA
Trigger: CGCCCTGGTGCCTCTCGTCCATGCTCCTGGGCCCCA...CAGAGGTGCGGGATTCTGACCAACGGCATTAAAACTGAGGCGAGACCGGGCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CCA 90 bp GCCCTTGGACGGGTCACAGCCACTTCTCTGGGGTCCTTTCCCCTTCTATTCCGTGGAAACGCGTTGTCCTaGGGCCCCGGCGTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: ALGRVTATSLGSFPLLFRGNALS*GPGVCW
Trigger: CCAGCACACGCCGGGGCCCCAGGACAACGCGTTTCC...ACGGAATAGAAGGGGAAAGGACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR TCA 90 bp CCCGGTCTCGCCTCAGTTTTAATGCCGTTGGTCAGAATCCCGCACCTCTGGGCTCCATGGCCAGCACTGTaGTGTTGTGCCAGCCGGCCG +
Preference number: 4 (lower is better)
Translates to: PGLASVLMPLVRIPHLWAPWPAL*CCASRP
Trigger: CGGCCGGCTGGCACAACATCACAGTGCTGGCCATGG...AGCCCAGAGGTGCGGGATTCTGACCAACGGCATTAAAACTGAGGCGAGACCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR TCA 90 bp GACGGGTCACAGCCACTTCTCTGGGGTCCTTTCCCCTTCTATTCCGTGCAGGACCCTGCTCCTGCCGGTTaGAGCCCACGTGCTGCGTGT +
Preference number: 4 (lower is better)
Translates to: DGSQPLLWGPFPFYSVQDPAPAG*SPRAAC
Trigger: ACACGCAGCACGTGGGCTTCAACCGGCAGGAGCAGG...GTCCTGCACGGAATAGAAGGGGAAAGGACCCCAGAGAAGTGGCTGTGACCCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR GCA 90 bp TGCCCTTGGACGGGTCACAGCCACTTCTCTGGGGTCCTTTCCCCTTCTATTCCGGCACCAGGGCGCCGCTaGTTGGTCGCACAACGATGC +
Preference number: 4 (lower is better)
Translates to: CPWTGHSHFSGVLSPSIPAPGRR*LVAQRC
Trigger: GCATCGTTGTGCGACCAAGCAGCGGCGCCCTGGTGC...CGGAATAGAAGGGGAAAGGACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR GCA 90 bp AGGCCAGGATTGAGTGACCCGCCCCTTCCCGACTCTGCAACGCCACCCCCATCTAGGAAGAACACGTCCTaGTCCTGCCGGTTGAAGCCC +
Preference number: 4 (lower is better)
Translates to: RPGLSDPPLPDSATPPPSRKNTS*SCRLKP
Trigger: GGGCTTCAACCGGCAGGAGCAGGACGTGTTCTTCCT...AGATGGGGGTGGCGTTGCAGAGTCGGGAAGGGGCGGGTCACTCAATCCTGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR GCA 90 bp CCCCAGAGCCACACCGTGCCCGGTCTCGCCTCAGTTTTAATGCCGTTGGTCAGACCCAGAGCCACACCGTaGCCGGTCTCGCCTCAGTTT +
Preference number: 4 (lower is better)
Translates to: PQSHTVPGLASVLMPLVRPRATP*PVSPQF
Trigger: AAACTGAGGCGAGACCGGGCACGGTGTGGCTCTGGG...TCTGACCAACGGCATTAAAACTGAGGCGAGACCGGGCACGGTGTGGCTCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CCA 90 bp TCACTGGCCAGGTGCCCTTGGACGGGTCACAGCCACTTCTCTGGGGTCCTTTCCAGAAAGGATGCGGGTTaGGGCCGGCAGATCCTGCCA +
Preference number: 4 (lower is better)
Translates to: SLARCPWTGHSHFSGVLSRKDAG*GRQILP
Trigger: TGGCAGGATCTGCCGGCCCCAACCCGCATCCTTTCT...GGAAAGGACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGCACCTGGCCAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CCA 90 bp TCAGAATCCCGCACCTCTGGGCTCCAAAGCTGCACCCCTAGAGGAGGAGGAATGCGCTGCTGCCGTACGTaGGGTCATCCGCATCCGAGG +
Preference number: 4 (lower is better)
Translates to: SESRTSGLQSCTPRGGGMRCCRT*GHPHPR
Trigger: CCTCGGATGCGGATGACCCCACGTACGGCAGCAGCG...CATTCCTCCTCCTCTAGGGGTGCAGCTTTGGAGCCCAGAGGTGCGGGATTCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CCA 90 bp GCCCTTGGACGGGTCACAGCCACTTCTCTGGGGTCCTTTCCCCTTCTATTCCGTGGGTCCACGGTGAAGTaGTGCTCGCCGTCCAGCACG +
Preference number: 4 (lower is better)
Translates to: ALGRVTATSLGSFPLLFRGSTVK*CSPSST
Trigger: CGTGCTGGACGGCGAGCACCACTTCACCGTGGACCC...ACGGAATAGAAGGGGAAAGGACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CCA 90 bp TCACTGGCCAGGTGCCCTTGGACGGGTCACAGCCACTTCTCTGGGGTCCTTTCCTGTTGCAGGACTGGATaGTGCCGGAGCTGTCGCAGC +
Preference number: 4 (lower is better)
Translates to: SLARCPWTGHSHFSGVLSCCRTG*CRSCRS
Trigger: GCTGCGACAGCTCCGGCACCATCCAGTCCTGCAACA...GGAAAGGACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGCACCTGGCCAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CCA 90 bp GTTGGTCAGAATCCCGCACCTCTGGGCTCCAAAGCTGCACCCCTAGAGGAGGAGCTCAGGTGGCTCTTGTaGTGGCGCCTGAGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: VGQNPAPLGSKAAPLEEELRWLL*WRLRVR
Trigger: CCTCACCCTCAGGCGCCACCACAAGAGCCACCTGAG...CTCCTCCTCTAGGGGTGCAGCTTTGGAGCCCAGAGGTGCGGGATTCTGACCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CCA 90 bp GTCCTTTCCCCTTCTATTCCGTGCAGGACACCACCTCATGGTTTCTCTGACGACCCCTGCGGCAGCGAGTaGCGCTCGGAGGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: VLSPSIPCRTPPHGFSDDPCGSE*RSEGRW
Trigger: CCACCTGCCCTCCGAGCGCCACTCGCTGCCGCAGGG...GTCGTCAGAGAAACCATGAGGTGGTGTCCTGCACGGAATAGAAGGGGAAAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CCA 90 bp GCCCTTGGACGGGTCACAGCCACTTCTCTGGGGTCCTTTCCCCTTCTATTCCGTCCGAGGCCAGGCAGCTaGTCAGTGCCAGAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: ALGRVTATSLGSFPLLFRPRPGS*SVPEAL
Trigger: CAGAGCCTCTGGCACTGACCAGCTGCCTGGCCTCGG...ACGGAATAGAAGGGGAAAGGACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
3UTR CAA 72 bp GTGCCAGAGGCTCTGCCATTCACTGGCCAGGTGCCCTaGGACGGGTCACAGCCACTTCTCTGGGGTCCTTTC +
Preference number: 4 (lower is better)
Translates to: VPEALPFTGQVP*DGSQPLLWGPF
Trigger: GAAAGGACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGCACCTGGCCAGTGAATGGCAGAGCCTCTGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR TCA 90 bp GCCCTTGGACGGGTCACAGCCACTTCTCTGGGGTCCTTTCCCCTTCTATTCCGTCCCGTCACCCTCGTCTaGGTCGGAGTGGATCTTGCC +
Preference number: 4 (lower is better)
Translates to: ALGRVTATSLGSFPLLFRPVTLV*VGVDLA
Trigger: GGCAAGATCCACTCCGACTCAGACGAGGGTGACGGG...ACGGAATAGAAGGGGAAAGGACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR TCA 90 bp GTTGGTCAGAATCCCGCACCTCTGGGCTCCAAAGCTGCACCCCTAGAGGAGGAGAGGCGCTCCATGGCATaGATGTCGCCTGTCAGCTCG +
Preference number: 4 (lower is better)
Translates to: VGQNPAPLGSKAAPLEEERRSMA*MSPVSS
Trigger: CGAGCTGACAGGCGACATTCATGCCATGGAGCGCCT...CTCCTCCTCTAGGGGTGCAGCTTTGGAGCCCAGAGGTGCGGGATTCTGACCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR TCA 90 bp CCATTCACTGGCCAGGTGCCCTTGGACGGGTCACAGCCACTTCTCTGGGGTCCTCCAGCACAACCAGGATaGGAACGCAGACCAAGAGGG +
Preference number: 4 (lower is better)
Translates to: PFTGQVPLDGSQPLLWGPPAQPG*ERRPRG
Trigger: CCCTCTTGGTCTGCGTTCTCATCCTGGTTGTGCTGG...AGGACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGCACCTGGCCAGTGAATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR TCA 90 bp TGCCATTCACTGGCCAGGTGCCCTTGGACGGGTCACAGCCACTTCTCTGGGGTCGAAGTCCCTGAACACTaGGAAGTCTGGCTCGGGGCT +
Preference number: 4 (lower is better)
Translates to: CHSLARCPWTGHSHFSGVEVPEH*EVWLGA
Trigger: AGCCCCGAGCCAGACTTCTCAGTGTTCAGGGACTTC...GACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGCACCTGGCCAGTGAATGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR GCA 90 bp GTCCTTTCCCCTTCTATTCCGTGCAGGACACCACCTCATGGTTTCTCTGACGACCGTCGCCGCGTCGCGTaGGGATCACCAGGCAGCACC +
Preference number: 4 (lower is better)
Translates to: VLSPSIPCRTPPHGFSDDRRRVA*GSPGST
Trigger: GGTGCTGCCTGGTGATCCGCACGCGACGCGGCGACG...GTCGTCAGAGAAACCATGAGGTGGTGTCCTGCACGGAATAGAAGGGGAAAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR GCA 90 bp GTTGGTCAGAATCCCGCACCTCTGGGCTCCAAAGCTGCACCCCTAGAGGAGGAGAGAGCTCGGCCACGCTaGCAATATAGGGGCCGTGCA +
Preference number: 4 (lower is better)
Translates to: VGQNPAPLGSKAAPLEEERARPR*QYRGRA
Trigger: TGCACGGCCCCTATATTGGCAGCGTGGCCGAGCTCT...CTCCTCCTCTAGGGGTGCAGCTTTGGAGCCCAGAGGTGCGGGATTCTGACCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR GCA 90 bp TGCCCTTGGACGGGTCACAGCCACTTCTCTGGGGTCCTTTCCCCTTCTATTCCGTGCAGGACTGGATGGTaGCGGAGCTGTCGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: CPWTGHSHFSGVLSPSIPCRTGW*RSCRSH
Trigger: GTGGCTGCGACAGCTCCGGCACCATCCAGTCCTGCA...CGGAATAGAAGGGGAAAGGACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR GCA 90 bp CGTGCCCGGTCTCGCCTCAGTTTTAATGCCGTTGGTCAGAATCCCGCACCTCTGGTCCCCGTCCGCCAGTaGCACCTTGCGGCTGATGAA +
Preference number: 4 (lower is better)
Translates to: RARSRLSFNAVGQNPAPLVPVRQ*HLAADE
Trigger: TTCATCAGCCGCAAGGTGGCACTGGCGGACGGGGAC...CAGAGGTGCGGGATTCTGACCAACGGCATTAAAACTGAGGCGAGACCGGGCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CCA 90 bp GTTGGTCAGAATCCCGCACCTCTGGGCTCCAAAGCTGCACCCCTAGAGGAGGAGGACCCGCCATGTCTGTaGCCTGGATCACCACCTCGT +
Preference number: 4 (lower is better)
Translates to: VGQNPAPLGSKAAPLEEEDPPCL*PGSPPR
Trigger: ACGAGGTGGTGATCCAGGCCACAGACATGGCGGGTC...CTCCTCCTCTAGGGGTGCAGCTTTGGAGCCCAGAGGTGCGGGATTCTGACCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CCA 90 bp CCCGGTCTCGCCTCAGTTTTAATGCCGTTGGTCAGAATCCCGCACCTCTGGGCTTCACCAGGCAGCACCTaGACAGCTCCAGAGTCGGGG +
Preference number: 4 (lower is better)
Translates to: PGLASVLMPLVRIPHLWASPGST*TAPESG
Trigger: CCCCGACTCTGGAGCTGTCCAGGTGCTGCCTGGTGA...AGCCCAGAGGTGCGGGATTCTGACCAACGGCATTAAAACTGAGGCGAGACCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CCA 90 bp CCATTCACTGGCCAGGTGCCCTTGGACGGGTCACAGCCACTTCTCTGGGGTCCTGGTCCAGGCGCTCCATaGCATGAATGTCGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: PFTGQVPLDGSQPLLWGPGPGAP*HECRLS
Trigger: TGACAGGCGACATTCATGCCATGGAGCGCCTGGACC...AGGACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGCACCTGGCCAGTGAATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CCA 90 bp TCACTGGCCAGGTGCCCTTGGACGGGTCACAGCCACTTCTCTGGGGTCCTTTCCCTGCCTCGTAGGGTGTaGCCAGTTCTGGGGGATTGT +
Preference number: 4 (lower is better)
Translates to: SLARCPWTGHSHFSGVLSLPRRV*PVLGDC
Trigger: ACAATCCCCCAGAACTGGCCACACCCTACGAGGCAG...GGAAAGGACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGCACCTGGCCAGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CCA 90 bp GTTGGTCAGAATCCCGCACCTCTGGGCTCCAAAGCTGCACCCCTAGAGGAGGAGCTGTGCTGCTCAGTGTaGGCGGCCCACTGTCTACCA +
Preference number: 4 (lower is better)
Translates to: VGQNPAPLGSKAAPLEEELCCSV*AAHCLP
Trigger: TGGTAGACAGTGGGCCGCCCACACTGAGCAGCACAG...CTCCTCCTCTAGGGGTGCAGCTTTGGAGCCCAGAGGTGCGGGATTCTGACCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CCA 90 bp TCAGAATCCCGCACCTCTGGGCTCCAAAGCTGCACCCCTAGAGGAGGAGGAATGTCGTCCGAGCTCAGGTaGCTCTTGTGGTGGCGCCTG +
Preference number: 4 (lower is better)
Translates to: SESRTSGLQSCTPRGGGMSSELR*LLWWRL
Trigger: CAGGCGCCACCACAAGAGCCACCTGAGCTCGGACGA...CATTCCTCCTCCTCTAGGGGTGCAGCTTTGGAGCCCAGAGGTGCGGGATTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CCA 90 bp GTTGGTCAGAATCCCGCACCTCTGGGCTCCAAAGCTGCACCCCTAGAGGAGGAGAGAATCCCGCACCTCTaGGCTCCAAAGCTGCACCCC +
Preference number: 4 (lower is better)
Translates to: VGQNPAPLGSKAAPLEEERIPHL*APKLHP
Trigger: GGGGTGCAGCTTTGGAGCCCAGAGGTGCGGGATTCT...CTCCTCCTCTAGGGGTGCAGCTTTGGAGCCCAGAGGTGCGGGATTCTGACCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CCA 90 bp TCAGAATCCCGCACCTCTGGGCTCCAAAGCTGCACCCCTAGAGGAGGAGGAATGCTGATGGGGGAAACCTaGGGTGGGGGCATCTCAGCG +
Preference number: 4 (lower is better)
Translates to: SESRTSGLQSCTPRGGGMLMGET*GGGISA
Trigger: CGCTGAGATGCCCCCACCCCAGGTTTCCCCCATCAG...CATTCCTCCTCCTCTAGGGGTGCAGCTTTGGAGCCCAGAGGTGCGGGATTCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR TCA 90 bp GACGGGTCACAGCCACTTCTCTGGGGTCCTTTCCCCTTCTATTCCGTGCAGGACCACAGATGCGGATGGTaGGCGTGCCTGTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: DGSQPLLWGPFPFYSVQDHRCGW*ACLCCS
Trigger: TGAGCAGCACAGGCACGCTCACCATCCGCATCTGTG...GTCCTGCACGGAATAGAAGGGGAAAGGACCCCAGAGAAGTGGCTGTGACCCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR GCA 90 bp TCCTTTCCCCTTCTATTCCGTGCAGGACACCACCTCATGGTTTCTCTGACGACTCCTGGTCGCGGAACGTaGCCAGGTCGGCGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: SFPLLFRAGHHLMVSLTTPGRGT*PGRRSG
Trigger: CCCGCTTCGCCGACCTGGGCACGTTCCGCGACCAGG...AGTCGTCAGAGAAACCATGAGGTGGTGTCCTGCACGGAATAGAAGGGGAAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR GCA 90 bp CCCCAGAGCCACACCGTGCCCGGTCTCGCCTCAGTTTTAATGCCGTTGGTCAGACATACAGGGGCTCCGTaGCCGTGTACTCCTCTACCA +
Preference number: 4 (lower is better)
Translates to: PQSHTVPGLASVLMPLVRHTGAP*PCTPLP
Trigger: TGGTAGAGGAGTACACGGGCACGGAGCCCCTGTATG...TCTGACCAACGGCATTAAAACTGAGGCGAGACCGGGCACGGTGTGGCTCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR GCA 90 bp GTTGGTCAGAATCCCGCACCTCTGGGCTCCAAAGCTGCACCCCTAGAGGAGGAGTCCGAGGCCATCACCTaGATCACCGACGTGCCTGTA +
Preference number: 4 (lower is better)
Translates to: VGQNPAPLGSKAAPLEEESEAIT*ITDVPV
Trigger: TACAGGCACGTCGGTGATGCAGGTGATGGCCTCGGA...CTCCTCCTCTAGGGGTGCAGCTTTGGAGCCCAGAGGTGCGGGATTCTGACCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR GCA 90 bp GCCCTTGGACGGGTCACAGCCACTTCTCTGGGGTCCTTTCCCCTTCTATTCCGTTTGAAGCCCACGTGCTaGGTGTGCACTGCAGCGGTG +
Preference number: 4 (lower is better)
Translates to: ALGRVTATSLGSFPLLFRLKPTC*VCTAAV
Trigger: CACCGCTGCAGTGCACACGCAGCACGTGGGCTTCAA...ACGGAATAGAAGGGGAAAGGACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR GCA 90 bp CGTGCCCGGTCTCGCCTCAGTTTTAATGCCGTTGGTCAGAATCCCGCACCTCTGAACACGTCCTGCTCCTaGCGGTTGAAGCCCACGTGC +
Preference number: 4 (lower is better)
Translates to: RARSRLSFNAVGQNPAPLNTSCS*RLKPTC
Trigger: GCACGTGGGCTTCAACCGGCAGGAGCAGGACGTGTT...CAGAGGTGCGGGATTCTGACCAACGGCATTAAAACTGAGGCGAGACCGGGCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR GCA 90 bp TGCCCTTGGACGGGTCACAGCCACTTCTCTGGGGTCCTTTCCCCTTCTATTCCGCAGTGCCAGAGGCTCTaGCATTCACTGGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: CPWTGHSHFSGVLSPSIPQCQRL*HSLARC
Trigger: GCACCTGGCCAGTGAATGGCAGAGCCTCTGGCACTG...CGGAATAGAAGGGGAAAGGACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CCA 90 bp GTCCTTTCCCCTTCTATTCCGTGCAGGACACCACCTCATGGTTTCTCTGACGACCAGGGCGCCGCTGCTTaGTCGCACAACGATGCGGCG +
Preference number: 4 (lower is better)
Translates to: VLSPSIPCRTPPHGFSDDQGAAA*SHNDAA
Trigger: CGCCGCATCGTTGTGCGACCAAGCAGCGGCGCCCTG...GTCGTCAGAGAAACCATGAGGTGGTGTCCTGCACGGAATAGAAGGGGAAAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CCA 90 bp TGCCCTTGGACGGGTCACAGCCACTTCTCTGGGGTCCTTTCCCCTTCTATTCCGCCTTGCCAGTCACGATaGCGCCTGTGTCCGCATCGA +
Preference number: 4 (lower is better)
Translates to: CPWTGHSHFSGVLSPSIPPCQSR*RLCPHR
Trigger: TCGATGCGGACACAGGCGCCATCGTGACTGGCAAGG...CGGAATAGAAGGGGAAAGGACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CCA 90 bp CCCGGTCTCGCCTCAGTTTTAATGCCGTTGGTCAGAATCCCGCACCTCTGGGCTAGGTGGCTCTTGTGGTaGCGCCTGAGGGTGAGGATC +
Preference number: 4 (lower is better)
Translates to: PGLASVLMPLVRIPHLWARWLLW*RLRVRI
Trigger: GATCCTCACCCTCAGGCGCCACCACAAGAGCCACCT...AGCCCAGAGGTGCGGGATTCTGACCAACGGCATTAAAACTGAGGCGAGACCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR TCA 90 bp GCCCTTGGACGGGTCACAGCCACTTCTCTGGGGTCCTTTCCCCTTCTATTCCGTACGATGATGGCCTCCTaGGTGTCGCTGTCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: ALGRVTATSLGSFPLLFRTMMAS*VSLSVV
Trigger: CACCACAGACAGCGACACTCAGGAGGCCATCATCGT...ACGGAATAGAAGGGGAAAGGACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR TCA 90 bp GTCCTTTCCCCTTCTATTCCGTGCAGGACACCACCTCATGGTTTCTCTGACGACGTGCGCGCGTGTGTGTaGGCGAGAGAGCGAGAGAGC +
Preference number: 4 (lower is better)
Translates to: VLSPSIPCRTPPHGFSDDVRACV*ARERES
Trigger: GCTCTCTCGCTCTCTCGCTCACACACACGCGCGCAC...GTCGTCAGAGAAACCATGAGGTGGTGTCCTGCACGGAATAGAAGGGGAAAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR TCA 90 bp TCAGAATCCCGCACCTCTGGGCTCCAAAGCTGCACCCCTAGAGGAGGAGGAATGCTGAGATGGTGTACTTaGTGGCCCCGTCACCCTCGT +
Preference number: 4 (lower is better)
Translates to: SESRTSGLQSCTPRGGGMLRWCT*WPRHPR
Trigger: ACGAGGGTGACGGGGCCATCAAGTACACCATCTCAG...CATTCCTCCTCCTCTAGGGGTGCAGCTTTGGAGCCCAGAGGTGCGGGATTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR TCA 90 bp GGGTCCTTTCCCCTTCTATTCCGTGCAGGACACCACCTCATGGTTTCTCTGACGTCTTGGGGTCCACGGTaGAGTGGTGCTCGCCGTCCA +
Preference number: 4 (lower is better)
Translates to: GSFPLLFRAGHHLMVSLTSWGPR*SGARRP
Trigger: TGGACGGCGAGCACCACTTCACCGTGGACCCCAAGA...CGTCAGAGAAACCATGAGGTGGTGTCCTGCACGGAATAGAAGGGGAAAGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR TCA 90 bp CGTGCCCGGTCTCGCCTCAGTTTTAATGCCGTTGGTCAGAATCCCGCACCTCTGACCAGAGAAGTGAAGTaGCTTGCCCGAGGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: RARSRLSFNAVGQNPAPLTREVK*LARGQA
Trigger: TGCCTGGCCTCGGGCAAGTCACTTCACTTCTCTGGT...CAGAGGTGCGGGATTCTGACCAACGGCATTAAAACTGAGGCGAGACCGGGCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR GCA 90 bp CGTGCCCGGTCTCGCCTCAGTTTTAATGCCGTTGGTCAGAATCCCGCACCTCTGTTGGTCGCACAACGATaGGGCGCCGTGTCACATGGT +
Preference number: 4 (lower is better)
Translates to: RARSRLSFNAVGQNPAPLLVAQR*GAVSHG
Trigger: ACCATGTGACACGGCGCCGCATCGTTGTGCGACCAA...CAGAGGTGCGGGATTCTGACCAACGGCATTAAAACTGAGGCGAGACCGGGCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR GCA 90 bp GCCCTTGGACGGGTCACAGCCACTTCTCTGGGGTCCTTTCCCCTTCTATTCCGTAGTCGGAGTGGATCTTaGCCACATACAGGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: ALGRVTATSLGSFPLLFRSRSGS*PHTGAP
Trigger: CGGAGCCCCTGTATGTGGGCAAGATCCACTCCGACT...ACGGAATAGAAGGGGAAAGGACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR GCA 90 bp TGCCATTCACTGGCCAGGTGCCCTTGGACGGGTCACAGCCACTTCTCTGGGGTCGAGAGAAATGAGGGTTaGTGGGAGCTTCAGGCACCA +
Preference number: 4 (lower is better)
Translates to: CHSLARCPWTGHSHFSGVERNEG*WELQAP
Trigger: TGGTGCCTGAAGCTCCCAGCAACCCTCATTTCTCTC...GACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGCACCTGGCCAGTGAATGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR GCA 90 bp TGCCCTTGGACGGGTCACAGCCACTTCTCTGGGGTCCTTTCCCCTTCTATTCCGCAGGCAGCTGGTCAGTaGCAGAGGCTCTGCCATTCA +
Preference number: 4 (lower is better)
Translates to: CPWTGHSHFSGVLSPSIPQAAGQ*QRLCHS
Trigger: TGAATGGCAGAGCCTCTGGCACTGACCAGCTGCCTG...CGGAATAGAAGGGGAAAGGACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR GCA 90 bp TGCCCTTGGACGGGTCACAGCCACTTCTCTGGGGTCCTTTCCCCTTCTATTCCGAGAAGTGAAGTGACTTaGCCGAGGCCAGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: CPWTGHSHFSGVLSPSIPRSEVT*PRPGSW
Trigger: CCAGCTGCCTGGCCTCGGGCAAGTCACTTCACTTCT...CGGAATAGAAGGGGAAAGGACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CCA 90 bp GCCCTTGGACGGGTCACAGCCACTTCTCTGGGGTCCTTTCCCCTTCTATTCCGTGTCGGGGAAGCGCCATaGTTCCTGCGCAGAAAGGAT +
Preference number: 4 (lower is better)
Translates to: ALGRVTATSLGSFPLLFRVGEAP*FLRRKD
Trigger: ATCCTTTCTGCGCAGGAACCATGGCGCTTCCCCGAC...ACGGAATAGAAGGGGAAAGGACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CCA 90 bp GGGTCCTTTCCCCTTCTATTCCGTGCAGGACACCACCTCATGGTTTCTCTGACGCTGATTCGCGGTCAATaGCGTACCGGACGGGCCGGT +
Preference number: 4 (lower is better)
Translates to: GSFPLLFRAGHHLMVSLTLIRGQ*RTGRAG
Trigger: ACCGGCCCGTCCGGTACGCCATTGACCGCGAATCAG...CGTCAGAGAAACCATGAGGTGGTGTCCTGCACGGAATAGAAGGGGAAAGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CCA 90 bp CCCGGTCTCGCCTCAGTTTTAATGCCGTTGGTCAGAATCCCGCACCTCTGGGCTACCACGCTGATGGTCTaGATGAGCTGGCCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: PGLASVLMPLVRIPHLWATTLMV*MSWPGL
Trigger: CAAGCCAGGCCAGCTCATCCAGACCATCAGCGTGGT...AGCCCAGAGGTGCGGGATTCTGACCAACGGCATTAAAACTGAGGCGAGACCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CCA 90 bp CCCCAGAGCCACACCGTGCCCGGTCTCGCCTCAGTTTTAATGCCGTTGGTCAGAAGAAATGAGGGTTGCTaGGAGCTTCAGGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: PQSHTVPGLASVLMPLVRRNEGC*ELQAPG
Trigger: GCCTGGTGCCTGAAGCTCCCAGCAACCCTCATTTCT...TCTGACCAACGGCATTAAAACTGAGGCGAGACCGGGCACGGTGTGGCTCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CCA 90 bp GGGTCCTTTCCCCTTCTATTCCGTGCAGGACACCACCTCATGGTTTCTCTGACGGGCTCTGCCATTCACTaGCCAGGTGCCCTTGGACGG +
Preference number: 4 (lower is better)
Translates to: GSFPLLFRAGHHLMVSLTGSAIH*PGALGR
Trigger: CCGTCCAAGGGCACCTGGCCAGTGAATGGCAGAGCC...CGTCAGAGAAACCATGAGGTGGTGTCCTGCACGGAATAGAAGGGGAAAGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR TCA 90 bp GTTGGTCAGAATCCCGCACCTCTGGGCTCCAAAGCTGCACCCCTAGAGGAGGAGCTGACTCCTGGATGCTaGACTGGTACATCTTCTGCG +
Preference number: 4 (lower is better)
Translates to: VGQNPAPLGSKAAPLEEELTPGC*TGTSSA
Trigger: CGCAGAAGATGTACCAGTTCAGCATCCAGGAGTCAG...CTCCTCCTCTAGGGGTGCAGCTTTGGAGCCCAGAGGTGCGGGATTCTGACCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR TCA 90 bp GGGTCCTTTCCCCTTCTATTCCGTGCAGGACACCACCTCATGGTTTCTCTGACGGGTCCACGAACTTGTTaGGGGCCTCCAGGATCACGG +
Preference number: 4 (lower is better)
Translates to: GSFPLLFRAGHHLMVSLTGPRTC*GPPGSR
Trigger: CCGTGATCCTGGAGGCCCTCAACAAGTTCGTGGACC...CGTCAGAGAAACCATGAGGTGGTGTCCTGCACGGAATAGAAGGGGAAAGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR TCA 90 bp TTTCCCCTTCTATTCCGTGCAGGACACCACCTCATGGTTTCTCTGACGACTGAGCAGGCCAGGATTGAGTaGCCCGCCCCTTCCCGACTC +
Preference number: 4 (lower is better)
Translates to: FPLLFRAGHHLMVSLTTEQARIE*PAPSRL
Trigger: GAGTCGGGAAGGGGCGGGTCACTCAATCCTGGCCTG...CTCAGTCGTCAGAGAAACCATGAGGTGGTGTCCTGCACGGAATAGAAGGGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR GCA 90 bp TGCCCTTGGACGGGTCACAGCCACTTCTCTGGGGTCCTTTCCCCTTCTATTCCGAAGCGCCATGGTTCCTaGGCAGAAAGGATGCGGGTT +
Preference number: 4 (lower is better)
Translates to: CPWTGHSHFSGVLSPSIPKRHGS*AERMRV
Trigger: AACCCGCATCCTTTCTGCGCAGGAACCATGGCGCTT...CGGAATAGAAGGGGAAAGGACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CCA 90 bp TCCTTTCCCCTTCTATTCCGTGCAGGACACCACCTCATGGTTTCTCTGACGACTGCTCCAGTAGGCGGTTaGTGGCGCGATCCCGAGCCT +
Preference number: 4 (lower is better)
Translates to: SFPLLFRAGHHLMVSLTTAPVGG*WRDPEP
Trigger: AGGCTCGGGATCGCGCCACCAACCGCCTACTGGAGC...AGTCGTCAGAGAAACCATGAGGTGGTGTCCTGCACGGAATAGAAGGGGAAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CCA 90 bp TCCTTTCCCCTTCTATTCCGTGCAGGACACCACCTCATGGTTTCTCTGACGACTAAGCGGTGCCCGCCTTaGGGCTCGTCTCTGTCCACC +
Preference number: 4 (lower is better)
Translates to: SFPLLFRAGHHLMVSLTTKRCPP*GSSLST
Trigger: GGTGGACAGAGACGAGCCCCAAGGCGGGCACCGCTT...AGTCGTCAGAGAAACCATGAGGTGGTGTCCTGCACGGAATAGAAGGGGAAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CCA 90 bp AGGCCAGGATTGAGTGACCCGCCCCTTCCCGACTCTGCAACGCCACCCCCATCTGCAGCGGTGTTGTCTTaGATGTCAAGCAGAGAGAAA +
Preference number: 4 (lower is better)
Translates to: RPGLSDPPLPDSATPPPSAAVLS*MSSREK
Trigger: TTTCTCTCTGCTTGACATCCAAGACAACACCGCTGC...AGATGGGGGTGGCGTTGCAGAGTCGGGAAGGGGCGGGTCACTCAATCCTGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR TCA 90 bp GTCCTTTCCCCTTCTATTCCGTGCAGGACACCACCTCATGGTTTCTCTGACGACCCCAGCACCCTCGCCTaGGATGGTGTACTTGATGGC +
Preference number: 4 (lower is better)
Translates to: VLSPSIPCRTPPHGFSDDPSTLA*DGVLDG
Trigger: GCCATCAAGTACACCATCTCAGGCGAGGGTGCTGGG...GTCGTCAGAGAAACCATGAGGTGGTGTCCTGCACGGAATAGAAGGGGAAAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR GCA 90 bp GGGTCCTTTCCCCTTCTATTCCGTGCAGGACACCACCTCATGGTTTCTCTGACGTCCAGGATCACGGTGTaGACGGGCTGGGATTCGAAG +
Preference number: 4 (lower is better)
Translates to: GSFPLLFRAGHHLMVSLTSRITV*TGWDSK
Trigger: CTTCGAATCCCAGCCCGTGCACACCGTGATCCTGGA...CGTCAGAGAAACCATGAGGTGGTGTCCTGCACGGAATAGAAGGGGAAAGGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CCA 90 bp TTTCCCCTTCTATTCCGTGCAGGACACCACCTCATGGTTTCTCTGACGACTGAGACGGTGTGCACGGGCTaGGATTCGAAGTCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: FPLLFRAGHHLMVSLTTETVCTG*DSKSRR
Trigger: GCGCCTGGACTTCGAATCCCAGCCCGTGCACACCGT...CTCAGTCGTCAGAGAAACCATGAGGTGGTGTCCTGCACGGAATAGAAGGGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CCA 90 bp GCCCTTGGACGGGTCACAGCCACTTCTCTGGGGTCCTTTCCCCTTCTATTCCGTTCGTCTGAGTCGGAGTaGATCTTGCCCACATACAGG +
Preference number: 4 (lower is better)
Translates to: ALGRVTATSLGSFPLLFRSSESE*ILPTYR
Trigger: CCTGTATGTGGGCAAGATCCACTCCGACTCAGACGA...ACGGAATAGAAGGGGAAAGGACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CCA 90 bp CGTGCCCGGTCTCGCCTCAGTTTTAATGCCGTTGGTCAGAATCCCGCACCTCTGTGTCTACCACCAGGATaGGCAGGAAGAACACGTCCT +
Preference number: 4 (lower is better)
Translates to: RARSRLSFNAVGQNPAPLCLPPG*AGRTRP
Trigger: AGGACGTGTTCTTCCTGCCCATCCTGGTGGTAGACA...CAGAGGTGCGGGATTCTGACCAACGGCATTAAAACTGAGGCGAGACCGGGCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CCA 90 bp CCCGGTCTCGCCTCAGTTTTAATGCCGTTGGTCAGAATCCCGCACCTCTGGGCTCTAGAGGAGGAGGAATaGAAGAGTCCGCTCCTAGCA +
Preference number: 4 (lower is better)
Translates to: PGLASVLMPLVRIPHLWALEEEE*KSPLLA
Trigger: TGCTAGGAGCGGACTCTTCCATTCCTCCTCCTCTAG...AGCCCAGAGGTGCGGGATTCTGACCAACGGCATTAAAACTGAGGCGAGACCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR TCA 90 bp CCCGGTCTCGCCTCAGTTTTAATGCCGTTGGTCAGAATCCCGCACCTCTGGGCTTCAAGCAGAGAGAAATaGGGGTTGCTGGGAGCTTCA +
Preference number: 4 (lower is better)
Translates to: PGLASVLMPLVRIPHLWASSREK*GLLGAS
Trigger: TGAAGCTCCCAGCAACCCTCATTTCTCTCTGCTTGA...AGCCCAGAGGTGCGGGATTCTGACCAACGGCATTAAAACTGAGGCGAGACCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR GCA 90 bp GGGTCCTTTCCCCTTCTATTCCGTGCAGGACACCACCTCATGGTTTCTCTGACGAAGTCCAGGCGCTTCTaGACTACGATGATGGCCTCC +
Preference number: 4 (lower is better)
Translates to: GSFPLLFRAGHHLMVSLTKSRRF*TTMMAS
Trigger: GGAGGCCATCATCGTAGTGCAGAAGCGCCTGGACTT...CGTCAGAGAAACCATGAGGTGGTGTCCTGCACGGAATAGAAGGGGAAAGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR GCA 90 bp TCCTTTCCCCTTCTATTCCGTGCAGGACACCACCTCATGGTTTCTCTGACGACTCCCACGTGCTGCGTGTaGACTGCAGCGGTGTTGTCT +
Preference number: 4 (lower is better)
Translates to: SFPLLFRAGHHLMVSLTTPTCCV*TAAVLS
Trigger: AGACAACACCGCTGCAGTGCACACGCAGCACGTGGG...AGTCGTCAGAGAAACCATGAGGTGGTGTCCTGCACGGAATAGAAGGGGAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR GCA 90 bp TCCTTTCCCCTTCTATTCCGTGCAGGACACCACCTCATGGTTTCTCTGACGACTCAAAGGCCGTGGTGTTaGAGGACTGGATGGTGCCGG +
Preference number: 4 (lower is better)
Translates to: SFPLLFRAGHHLMVSLTTQRPWC*RTGWCR
Trigger: CCGGCACCATCCAGTCCTGCAACACCACGGCCTTTG...AGTCGTCAGAGAAACCATGAGGTGGTGTCCTGCACGGAATAGAAGGGGAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CCA 90 bp GTCCTTTCCCCTTCTATTCCGTGCAGGACACCACCTCATGGTTTCTCTGACGACCTGGATGAGCTGGCCTaGCTTGGCATCCTCGCATAC +
Preference number: 4 (lower is better)
Translates to: VLSPSIPCRTPPHGFSDDLDELA*LGILAY
Trigger: GTATGCGAGGATGCCAAGCCAGGCCAGCTCATCCAG...GTCGTCAGAGAAACCATGAGGTGGTGTCCTGCACGGAATAGAAGGGGAAAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CCA 90 bp TCCTTTCCCCTTCTATTCCGTGCAGGACACCACCTCATGGTTTCTCTGACGACTGTGGTGTTGCAGGACTaGATGGTGCCGGAGCTGTCG +
Preference number: 4 (lower is better)
Translates to: SFPLLFRAGHHLMVSLTTVVLQD*MVPELS
Trigger: CGACAGCTCCGGCACCATCCAGTCCTGCAACACCAC...AGTCGTCAGAGAAACCATGAGGTGGTGTCCTGCACGGAATAGAAGGGGAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR TCA 90 bp TCCTTTCCCCTTCTATTCCGTGCAGGACACCACCTCATGGTTTCTCTGACGACTGCTTCTGCACTACGATaGTGGCCTCCTGAGTGTCGC +
Preference number: 4 (lower is better)
Translates to: SFPLLFRAGHHLMVSLTTASALR*WPPECR
Trigger: GCGACACTCAGGAGGCCATCATCGTAGTGCAGAAGC...AGTCGTCAGAGAAACCATGAGGTGGTGTCCTGCACGGAATAGAAGGGGAAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR GCA 90 bp TTTCCCCTTCTATTCCGTGCAGGACACCACCTCATGGTTTCTCTGACGACTGAGATCCTCGCATACAGCTaGCTCGTAGGGTGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: FPLLFRAGHHLMVSLTTEILAYS*LVGCGQ
Trigger: CTGGCCACACCCTACGAGGCAGCTGTATGCGAGGAT...CTCAGTCGTCAGAGAAACCATGAGGTGGTGTCCTGCACGGAATAGAAGGGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR GCA 90 bp TTTCCCCTTCTATTCCGTGCAGGACACCACCTCATGGTTTCTCTGACGACTGAGTCTGGGCTCCAAAGCTaGACCCCTAGAGGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: FPLLFRAGHHLMVSLTTESGLQS*TPRGGG
Trigger: TCCTCCTCCTCTAGGGGTGCAGCTTTGGAGCCCAGA...CTCAGTCGTCAGAGAAACCATGAGGTGGTGTCCTGCACGGAATAGAAGGGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CCA 90 bp GCCCTTGGACGGGTCACAGCCACTTCTCTGGGGTCCTTTCCCCTTCTATTCCGTTCCTGGATGCTGAACTaGTACATCTTCTGCGGGAAA +
Preference number: 4 (lower is better)
Translates to: ALGRVTATSLGSFPLLFRSWMLN*YIFCGK
Trigger: TTTCCCGCAGAAGATGTACCAGTTCAGCATCCAGGA...ACGGAATAGAAGGGGAAAGGACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CCA 90 bp CCCCAGAGCCACACCGTGCCCGGTCTCGCCTCAGTTTTAATGCCGTTGGTCAGATCGATATCGAAGATCTaGTCCAAATCTGATTCGCGG +
Preference number: 4 (lower is better)
Translates to: PQSHTVPGLASVLMPLVRSISKI*SKSDSR
Trigger: CCGCGAATCAGATTTGGACCAGATCTTCGATATCGA...TCTGACCAACGGCATTAAAACTGAGGCGAGACCGGGCACGGTGTGGCTCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CCA 90 bp TCCTTTCCCCTTCTATTCCGTGCAGGACACCACCTCATGGTTTCTCTGACGACTATGGTCTGGATGAGCTaGCCTGGCTTGGCATCCTCG +
Preference number: 4 (lower is better)
Translates to: SFPLLFRAGHHLMVSLTTMVWMS*PGLASS
Trigger: CGAGGATGCCAAGCCAGGCCAGCTCATCCAGACCAT...AGTCGTCAGAGAAACCATGAGGTGGTGTCCTGCACGGAATAGAAGGGGAAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR TCA 90 bp GGGTCCTTTCCCCTTCTATTCCGTGCAGGACACCACCTCATGGTTTCTCTGACGGATCTGGTCCAAATCTaGTTCGCGGTCAATGGCGTA +
Preference number: 4 (lower is better)
Translates to: GSFPLLFRAGHHLMVSLTDLVQI*FAVNGV
Trigger: TACGCCATTGACCGCGAATCAGATTTGGACCAGATC...CGTCAGAGAAACCATGAGGTGGTGTCCTGCACGGAATAGAAGGGGAAAGGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR GCA 90 bp TTTCCCCTTCTATTCCGTGCAGGACACCACCTCATGGTTTCTCTGACGACTGAGGTGCTGCGTGTGCACTaGAGCGGTGTTGTCTTGGAT +
Preference number: 4 (lower is better)
Translates to: FPLLFRAGHHLMVSLTTEVLRVH*SGVVLD
Trigger: ATCCAAGACAACACCGCTGCAGTGCACACGCAGCAC...CTCAGTCGTCAGAGAAACCATGAGGTGGTGTCCTGCACGGAATAGAAGGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CCA 90 bp TCCTTTCCCCTTCTATTCCGTGCAGGACACCACCTCATGGTTTCTCTGACGACTATGGGGGCTGACTCCTaGATGCTGAACTGGTACATC +
Preference number: 4 (lower is better)
Translates to: SFPLLFRAGHHLMVSLTTMGADS*MLNWYI
Trigger: GATGTACCAGTTCAGCATCCAGGAGTCAGCCCCCAT...AGTCGTCAGAGAAACCATGAGGTGGTGTCCTGCACGGAATAGAAGGGGAAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS GCA 90 bp CACACCCAGCCGCGTTTGACGCGGCCGGCTCCCAGCGCGCCGTCCTaGCGAGCTCCGGGCGCCGACGGCGAGGGTGTGCCCGCTGCCCAC +
Preference number: 5 (lower is better)
Translates to: HTQPRLTRPAPSAPS*RAPGADGEGVPAAH
Trigger: GTGGGCAGCGGGCACACCCTCGCCGTCGGCGCCCGGAGCTCGGCAGGACGGCGCGCTGGGAGCCGGCCGCGTCAAACGCGGCTGGGTGTG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS CCA 90 bp GCGCCGCTGCTTGGTCGCACAACGATGCGGCGCCGTGTCACATGGTaGCCTCAGCGCGGCCGCCGGGATGTCGCCCCCGACGGGGCACCC +
Preference number: 5 (lower is better)
Translates to: APLLGRTTMRRRVTW*PQRGRRDVAPDGAP
Trigger: GGGTGCCCCGTCGGGGGCGACATCCCGGCGGCCGCGCTGAGGCCACCATGTGACACGGCGCCGCATCGTTGTGCGACCAAGCAGCGGCGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS CCA 90 bp AGGGCGCCGCTGCTTGGTCGCACAACGATGCGGCGCCGTGTCACATaGTGGCCTCAGCGCGGCCGCCGGGATGTCGCCCCCGACGGGGCA +
Preference number: 5 (lower is better)
Translates to: RAPLLGRTTMRRRVT*WPQRGRRDVAPDGA
Trigger: TGCCCCGTCGGGGGCGACATCCCGGCGGCCGCGCTGAGGCCACCATGTGACACGGCGCCGCATCGTTGTGCGACCAAGCAGCGGCGCCCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS TCA 90 bp AGGCGAAGTCCTGCTCGGAGCCCGACGAGCCGCTGTGCAGGGAGCTaGGCGAGGCGGCCGGCGAGTCCGCGCCCTCGAAGGCGTAGGTCT +
Preference number: 5 (lower is better)
Translates to: RRSPARSPTSRCAGS*ARRPASPRPRRRRS
Trigger: AGACCTACGCCTTCGAGGGCGCGGACTCGCCGGCCGCCTCGCTCAGCTCCCTGCACAGCGGCTCGTCGGGCTCCGAGCAGGACTTCGCCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS GCA 90 bp CATGGACGAGAGGCACCAGGGCGCCGCTGCTTGGTCGCACAACGATaGGGCGCCGTGTCACATGGTGGCCTCAGCGCGGCCGCCGGGATG +
Preference number: 5 (lower is better)
Translates to: HGREAPGRRCLVAQR*GAVSHGGLSAAAGM
Trigger: CATCCCGGCGGCCGCGCTGAGGCCACCATGTGACACGGCGCCGCATCGTTGTGCGACCAAGCAGCGGCGCCCTGGTGCCTCTCGTCCATG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS GCA 90 bp GGGGCTGGGGCCCAGGAGCATGGACGAGAGGCACCAGGGCGCCGCTaGTTGGTCGCACAACGATGCGGCGCCGTGTCACATGGTGGCCTC +
Preference number: 5 (lower is better)
Translates to: GAGAQEHGREAPGRR*LVAQRCGAVSHGGL
Trigger: GAGGCCACCATGTGACACGGCGCCGCATCGTTGTGCGACCAAGCAGCGGCGCCCTGGTGCCTCTCGTCCATGCTCCTGGGCCCCAGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS CCA 90 bp CCGCGCCCCCGTCGCCGCGTCGCGTGCGGATCACCAGGCAGCACCTaGACAGCTCCAGAGTCGGGGAAGCGCCATGGTTCCTGCGCAGAA +
Preference number: 5 (lower is better)
Translates to: PRPRRRVACGSPGST*TAPESGKRHGSCAE
Trigger: TTCTGCGCAGGAACCATGGCGCTTCCCCGACTCTGGAGCTGTCCAGGTGCTGCCTGGTGATCCGCACGCGACGCGGCGACGGGGGCGCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS GCA 90 bp GGGCACAGGGATGGCCCAGTCGAGAGATCAGGGAGCCAGTGTGGCTaGAGCCAGCAGCGCGGAGACCCCGCCAGTGCAGTGCCCGCCTCT +
Preference number: 5 (lower is better)
Translates to: GHRDGPVERSGSQCG*SQQRGDPASAVPAS
Trigger: AGAGGCGGGCACTGCACTGGCGGGGTCTCCGCGCTGCTGGCTGCAGCCACACTGGCTCCCTGATCTCTCGACTGGGCCATCCCTGTGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474438.1
CDS CCA 90 bp TCCTGGGCACAGGGATGGCCCAGTCGAGAGATCAGGGAGCCAGTGTaGCTGCAGCCAGCAGCGCGGAGACCCCGCCAGTGCAGTGCCCGC +
Preference number: 5 (lower is better)
Translates to: SWAQGWPSREIREPV*LQPAARRPRQCSAR
Trigger: GCGGGCACTGCACTGGCGGGGTCTCCGCGCTGCTGGCTGCAGCCACACTGGCTCCCTGATCTCTCGACTGGGCCATCCCTGTGCCCAGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474438.1
CDS CCA 90 bp CTGGGGCCCAGGAGCATGGACGAGAGGCACCAGGGCGCCGCTGCTTaGTCGCACAACGATGCGGCGCCGTGTCACATGGTGGCCTCAGCG +
Preference number: 5 (lower is better)
Translates to: LGPRSMDERHQGAAA*SHNDAAPCHMVASA
Trigger: CGCTGAGGCCACCATGTGACACGGCGCCGCATCGTTGTGCGACCAAGCAGCGGCGCCCTGGTGCCTCTCGTCCATGCTCCTGGGCCCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS TCA 90 bp CCCGTCCGCCAGTGCCACCTTGCGGCTGATGAAGTCCCTGAACACTaGGAAGTCTGGCTCGGGGCTCGGCGGCCCCTGCGGCAGCGAGTG +
Preference number: 5 (lower is better)
Translates to: PVRQCHLAADEVPEH*EVWLGARRPLRQRV
Trigger: CACTCGCTGCCGCAGGGGCCGCCGAGCCCCGAGCCAGACTTCTCAGTGTTCAGGGACTTCATCAGCCGCAAGGTGGCACTGGCGGACGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS GCA 90 bp GGCAGCACCTGGACAGCTCCAGAGTCGGGGAAGCGCCATGGTTCCTaGGCAGAAAGGATGCGGGTTGGGGCCGGCAGATCCTGCCAGGAC +
Preference number: 5 (lower is better)
Translates to: GSTWTAPESGKRHGS*AERMRVGAGRSCQD
Trigger: GTCCTGGCAGGATCTGCCGGCCCCAACCCGCATCCTTTCTGCGCAGGAACCATGGCGCTTCCCCGACTCTGGAGCTGTCCAGGTGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CAA 90 bp TCACTGGCCAGGTGCCCTTGGACGGGTCACAGCCACTTCTCTGGGGTCCTTTCCGGCTCCAGTAGGCGGTaGGTGGCGCGATCCCGAGCC +
Preference number: 5 (lower is better)
Translates to: SLARCPWTGHSHFSGVLSGSSRR*VARSRA
Trigger: GGCTCGGGATCGCGCCACCAACCGCCTACTGGAGCC...GGAAAGGACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGCACCTGGCCAGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS TCA 90 bp CGCGGAACGTGCCCAGGTCGGCGAAGCGGGGGTCCACGAACTTGTTaGGGGCCTCCAGGATCACGGTGTGCACGGGCTGGGATTCGAAGT +
Preference number: 5 (lower is better)
Translates to: RGTCPGRRSGGPRTC*GPPGSRCARAGIRS
Trigger: ACTTCGAATCCCAGCCCGTGCACACCGTGATCCTGGAGGCCCTCAACAAGTTCGTGGACCCCCGCTTCGCCGACCTGGGCACGTTCCGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474438.1
ENST00000537909.4
CDS CCA 90 bp GGGCTGAGGGAGGCGGCCATGACAAAGGCCGTGGTGTTGCAGGACTaGATGGTGCCGGAGCTGTCGCAGCCACAGATGCGGATGGTGAGC +
Preference number: 5 (lower is better)
Translates to: GLREAAMTKAVVLQD*MVPELSQPQMRMVS
Trigger: GCTCACCATCCGCATCTGTGGCTGCGACAGCTCCGGCACCATCCAGTCCTGCAACACCACGGCCTTTGTCATGGCCGCCTCCCTCAGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CAA 90 bp AGGCCAGGATTGAGTGACCCGCCCCTTCCCGACTCTGCAACGCCACCCCCATCTCAGAAAGGATGCGGGTaGGGGCCGGCAGATCCTGCC +
Preference number: 5 (lower is better)
Translates to: RPGLSDPPLPDSATPPPSQKGCG*GPADPA
Trigger: GGCAGGATCTGCCGGCCCCAACCCGCATCCTTTCTG...AGATGGGGGTGGCGTTGCAGAGTCGGGAAGGGGCGGGTCACTCAATCCTGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CAA 90 bp CGTGCCCGGTCTCGCCTCAGTTTTAATGCCGTTGGTCAGAATCCCGCACCTCTGCACACCCAGCCGCGTTaGACGCGGCCGGCTCCCAGC +
Preference number: 5 (lower is better)
Translates to: RARSRLSFNAVGQNPAPLHTQPR*TRPAPS
Trigger: GCTGGGAGCCGGCCGCGTCAAACGCGGCTGGGTGTG...CAGAGGTGCGGGATTCTGACCAACGGCATTAAAACTGAGGCGAGACCGGGCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CAA 90 bp AGGCCAGGATTGAGTGACCCGCCCCTTCCCGACTCTGCAACGCCACCCCCATCTTCCTGCTCCTGCCGGTaGAAGCCCACGTGCTGCGTG +
Preference number: 5 (lower is better)
Translates to: RPGLSDPPLPDSATPPPSSCSCR*KPTCCV
Trigger: CACGCAGCACGTGGGCTTCAACCGGCAGGAGCAGGA...AGATGGGGGTGGCGTTGCAGAGTCGGGAAGGGGCGGGTCACTCAATCCTGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS CCA 90 bp ATCACCAGGCAGCACCTGGACAGCTCCAGAGTCGGGGAAGCGCCATaGTTCCTGCGCAGAAAGGATGCGGGTTGGGGCCGGCAGATCCTG +
Preference number: 5 (lower is better)
Translates to: ITRQHLDSSRVGEAP*FLRRKDAGWGRQIL
Trigger: CAGGATCTGCCGGCCCCAACCCGCATCCTTTCTGCGCAGGAACCATGGCGCTTCCCCGACTCTGGAGCTGTCCAGGTGCTGCCTGGTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CAA 90 bp AGGCCAGGATTGAGTGACCCGCCCCTTCCCGACTCTGCAACGCCACCCCCATCTCGGGGGTCCACGAACTaGTTGAGGGCCTCCAGGATC +
Preference number: 5 (lower is better)
Translates to: RPGLSDPPLPDSATPPPSRGSTN*LRASRI
Trigger: GATCCTGGAGGCCCTCAACAAGTTCGTGGACCCCCG...AGATGGGGGTGGCGTTGCAGAGTCGGGAAGGGGCGGGTCACTCAATCCTGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS CCA 90 bp AGAGTCGGGGAAGCGCCATGGTTCCTGCGCAGAAAGGATGCGGGTTaGGGCCGGCAGATCCTGCCAGGACTAGGGGCCTTCCCTTTCCAT +
Preference number: 5 (lower is better)
Translates to: RVGEAPWFLRRKDAG*GRQILPGLGAFPFH
Trigger: ATGGAAAGGGAAGGCCCCTAGTCCTGGCAGGATCTGCCGGCCCCAACCCGCATCCTTTCTGCGCAGGAACCATGGCGCTTCCCCGACTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CAA 90 bp GCCCTTGGACGGGTCACAGCCACTTCTCTGGGGTCCTTTCCCCTTCTATTCCGTGAAGCGGTGCCCGCCTaGGGGCTCGTCTCTGTCCAC +
Preference number: 5 (lower is better)
Translates to: ALGRVTATSLGSFPLLFREAVPA*GLVSVH
Trigger: GTGGACAGAGACGAGCCCCAAGGCGGGCACCGCTTC...ACGGAATAGAAGGGGAAAGGACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CAA 90 bp TGCCCTTGGACGGGTCACAGCCACTTCTCTGGGGTCCTTTCCCCTTCTATTCCGTCCCCCAGGCCAGGATaGAGTGACCCGCCCCTTCCC +
Preference number: 5 (lower is better)
Translates to: CPWTGHSHFSGVLSPSIPSPRPG*SDPPLP
Trigger: GGGAAGGGGCGGGTCACTCAATCCTGGCCTGGGGGA...CGGAATAGAAGGGGAAAGGACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS CCA 90 bp AGGGGAGTGCAGCAGCCACCAGGCCAGGGAGCAGGGGATCCCAGGTaGAAAGGTGGAGAGGGAGTGACTTTAGCCGAGCACTTGCTGTGT +
Preference number: 5 (lower is better)
Translates to: RGVQQPPGQGAGDPR*KGGEGVTLAEHLLC
Trigger: ACACAGCAAGTGCTCGGCTAAAGTCACTCCCTCTCCACCTTTCCACCTGGGATCCCCTGCTCCCTGGCCTGGTGGCTGCTGCACTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474438.1
CDS CCA 90 bp TGTGCCAGCCGGCCGTCTCGCGGTCCAGCCCCTTGCCAGTCACGATaGCGCCTGTGTCCGCATCGATATCGAAGATCTGGTCCAAATCTG +
Preference number: 5 (lower is better)
Translates to: CASRPSRGPAPCQSR*RLCPHRYRRSGPNL
Trigger: CAGATTTGGACCAGATCTTCGATATCGATGCGGACACAGGCGCCATCGTGACTGGCAAGGGGCTGGACCGCGAGACGGCCGGCTGGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CAA 90 bp TCACTGGCCAGGTGCCCTTGGACGGGTCACAGCCACTTCTCTGGGGTCCTTTCCCGGGGCGGGTTGTCATaGACGTCGGTGACTACGATG +
Preference number: 5 (lower is better)
Translates to: SLARCPWTGHSHFSGVLSRGGLS*TSVTTM
Trigger: CATCGTAGTCACCGACGTCAATGACAACCCGCCCCG...GGAAAGGACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGCACCTGGCCAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CAA 90 bp TGCCATTCACTGGCCAGGTGCCCTTGGACGGGTCACAGCCACTTCTCTGGGGTCGGGAAACGGGGCGGGTaGTCATTGACGTCGGTGACT +
Preference number: 5 (lower is better)
Translates to: CHSLARCPWTGHSHFSGVGKRGG*SLTSVT
Trigger: AGTCACCGACGTCAATGACAACCCGCCCCGTTTCCC...GACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGCACCTGGCCAGTGAATGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CAA 90 bp TTTCCCCTTCTATTCCGTGCAGGACACCACCTCATGGTTTCTCTGACGACTGAGGCCTCGGCCTCATCCTaGGCCTGCGCGGGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: FPLLFRAGHHLMVSLTTEASASS*ACAGLG
Trigger: CCCCAGCCCCGCGCAGGCCAAGGATGAGGCCGAGGC...CTCAGTCGTCAGAGAAACCATGAGGTGGTGTCCTGCACGGAATAGAAGGGGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CAA 90 bp TCACTGGCCAGGTGCCCTTGGACGGGTCACAGCCACTTCTCTGGGGTCCTTTCCCCTGAGATGGTGTACTaGATGGCCCCGTCACCCTCG +
Preference number: 5 (lower is better)
Translates to: SLARCPWTGHSHFSGVLSPEMVY*MAPSPS
Trigger: CGAGGGTGACGGGGCCATCAAGTACACCATCTCAGG...GGAAAGGACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGCACCTGGCCAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS TCA 90 bp CTACCACCAGGATGGGCAGGAAGAACACGTCCTGCTCCTGCCGGTTaGAGCCCACGTGCTGCGTGTGCACTGCAGCGGTGTTGTCTTGGA +
Preference number: 5 (lower is better)
Translates to: LPPGWAGRTRPAPAG*SPRAACALQRCCLG
Trigger: TCCAAGACAACACCGCTGCAGTGCACACGCAGCACGTGGGCTTCAACCGGCAGGAGCAGGACGTGTTCTTCCTGCCCATCCTGGTGGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS GCA 90 bp AAGCGGGGGTCCACGAACTTGTTGAGGGCCTCCAGGATCACGGTGTaGACGGGCTGGGATTCGAAGTCCAGGCGCTTCTGCACTACGATG +
Preference number: 5 (lower is better)
Translates to: KRGSTNLLRASRITV*TGWDSKSRRFCTTM
Trigger: CATCGTAGTGCAGAAGCGCCTGGACTTCGAATCCCAGCCCGTGCACACCGTGATCCTGGAGGCCCTCAACAAGTTCGTGGACCCCCGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474438.1
ENST00000537909.4
CDS CCA 90 bp TCCCGCATGTCTTCATCCTCGTCCGAGCTCAGGTGGCTCTTGTGGTaGCGCCTGAGGGTGAGGATCAGCAGCACCAGCACAACCAGGATG +
Preference number: 5 (lower is better)
Translates to: SRMSSSSSELRWLLW*RLRVRISSTSTTRM
Trigger: CATCCTGGTTGTGCTGGTGCTGCTGATCCTCACCCTCAGGCGCCACCACAAGAGCCACCTGAGCTCGGACGAGGATGAAGACATGCGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS CCA 90 bp TTGTCCCGCATGTCTTCATCCTCGTCCGAGCTCAGGTGGCTCTTGTaGTGGCGCCTGAGGGTGAGGATCAGCAGCACCAGCACAACCAGG +
Preference number: 5 (lower is better)
Translates to: LSRMSSSSSELRWLL*WRLRVRISSTSTTR
Trigger: CCTGGTTGTGCTGGTGCTGCTGATCCTCACCCTCAGGCGCCACCACAAGAGCCACCTGAGCTCGGACGAGGATGAAGACATGCGGGACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CAA 90 bp CGTGCCCGGTCTCGCCTCAGTTTTAATGCCGTTGGTCAGAATCCCGCACCTCTGCGGATTACGCCGGTCTaGGGGTCCACGGTGAAGTGG +
Preference number: 5 (lower is better)
Translates to: RARSRLSFNAVGQNPAPLRITPV*GSTVKW
Trigger: CCACTTCACCGTGGACCCCAAGACCGGCGTAATCCG...CAGAGGTGCGGGATTCTGACCAACGGCATTAAAACTGAGGCGAGACCGGGCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CAA 90 bp GACGGGTCACAGCCACTTCTCTGGGGTCCTTTCCCCTTCTATTCCGTGCAGGACTCCGCCAGTGCCACCTaGCGGCTGATGAAGTCCCTG +
Preference number: 5 (lower is better)
Translates to: DGSQPLLWGPFPFYSVQDSASAT*RLMKSL
Trigger: CAGGGACTTCATCAGCCGCAAGGTGGCACTGGCGGA...GTCCTGCACGGAATAGAAGGGGAAAGGACCCCAGAGAAGTGGCTGTGACCCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS GCA 90 bp CTCATTGACTGTTCTCACATCTGCTTCCTTGGCTCTTTGGCTCCGTaGCTGTTTCTCTCCACCCGTGCGCCTCTCTCCGCGCCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: LIDCSHICFLGSLAP*LFLSTRAPLSAPPS
Trigger: GGAGGGAGGCGCGGAGAGAGGCGCACGGGTGGAGAGAAACAGGCACGGAGCCAAAGAGCCAAGGAAGCAGATGTGAGAACAGTCAATGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474438.1
CDS GCA 90 bp GGCAGGAAGAACACGTCCTGCTCCTGCCGGTTGAAGCCCACGTGCTaGGTGTGCACTGCAGCGGTGTTGTCTTGGATGTCAAGCAGAGAG +
Preference number: 5 (lower is better)
Translates to: GRKNTSCSCRLKPTC*VCTAAVLSWMSSRE
Trigger: CTCTCTGCTTGACATCCAAGACAACACCGCTGCAGTGCACACGCAGCACGTGGGCTTCAACCGGCAGGAGCAGGACGTGTTCTTCCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS CCA 90 bp TCAGCCTTCACACGTCCCACAGCCGTTCCAATGGGGGCTGACTCCTaGATGCTGAACTGGTACATCTTCTGCGGGAAACGGGGCGGGTTG +
Preference number: 5 (lower is better)
Translates to: SAFTRPTAVPMGADS*MLNWYIFCGKRGGL
Trigger: CAACCCGCCCCGTTTCCCGCAGAAGATGTACCAGTTCAGCATCCAGGAGTCAGCCCCCATTGGAACGGCTGTGGGACGTGTGAAGGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474438.1
ENST00000537909.4
CDS CCA 90 bp TTGATGACGTTGTCCCGCATGTCTTCATCCTCGTCCGAGCTCAGGTaGCTCTTGTGGTGGCGCCTGAGGGTGAGGATCAGCAGCACCAGC +
Preference number: 5 (lower is better)
Translates to: LMTLSRMSSSSSELR*LLWWRLRVRISSTS
Trigger: GCTGGTGCTGCTGATCCTCACCCTCAGGCGCCACCACAAGAGCCACCTGAGCTCGGACGAGGATGAAGACATGCGGGACAACGTCATCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CAA 90 bp GCCCTTGGACGGGTCACAGCCACTTCTCTGGGGTCCTTTCCCCTTCTATTCCGTCTGTCTGTGGTGACCTaGAACACATCGCCGCCGCTG +
Preference number: 5 (lower is better)
Translates to: ALGRVTATSLGSFPLLFRLSVVT*NTSPPL
Trigger: CAGCGGCGGCGATGTGTTCAAGGTCACCACAGACAG...ACGGAATAGAAGGGGAAAGGACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CAA 90 bp GACGGGTCACAGCCACTTCTCTGGGGTCCTTTCCCCTTCTATTCCGTGCAGGACGGGTCCACGAACTTGTaGAGGGCCTCCAGGATCACG +
Preference number: 5 (lower is better)
Translates to: DGSQPLLWGPFPFYSVQDGSTNL*RASRIT
Trigger: CGTGATCCTGGAGGCCCTCAACAAGTTCGTGGACCC...GTCCTGCACGGAATAGAAGGGGAAAGGACCCCAGAGAAGTGGCTGTGACCCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CAA 90 bp TTTCCCCTTCTATTCCGTGCAGGACACCACCTCATGGTTTCTCTGACGACTGAGCCAGGGCGCCGCTGCTaGGTCGCACAACGATGCGGC +
Preference number: 5 (lower is better)
Translates to: FPLLFRAGHHLMVSLTTEPGRRC*VAQRCG
Trigger: GCCGCATCGTTGTGCGACCAAGCAGCGGCGCCCTGG...CTCAGTCGTCAGAGAAACCATGAGGTGGTGTCCTGCACGGAATAGAAGGGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CAA 90 bp CGTGCCCGGTCTCGCCTCAGTTTTAATGCCGTTGGTCAGAATCCCGCACCTCTGGAGTCGGAGTGGATCTaGCCCACATACAGGGGCTCC +
Preference number: 5 (lower is better)
Translates to: RARSRLSFNAVGQNPAPLESEWI*PTYRGS
Trigger: GGAGCCCCTGTATGTGGGCAAGATCCACTCCGACTC...CAGAGGTGCGGGATTCTGACCAACGGCATTAAAACTGAGGCGAGACCGGGCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CAA 90 bp GTTGGTCAGAATCCCGCACCTCTGGGCTCCAAAGCTGCACCCCTAGAGGAGGAGATGAGCTGGCCTGGCTaGGCATCCTCGCATACAGCT +
Preference number: 5 (lower is better)
Translates to: VGQNPAPLGSKAAPLEEEMSWPG*ASSHTA
Trigger: AGCTGTATGCGAGGATGCCAAGCCAGGCCAGCTCAT...CTCCTCCTCTAGGGGTGCAGCTTTGGAGCCCAGAGGTGCGGGATTCTGACCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CAA 90 bp TCACTGGCCAGGTGCCCTTGGACGGGTCACAGCCACTTCTCTGGGGTCCTTTCCCCGCCGCCTTCGTCGTaGTATTTGATGACGTTGTCC +
Preference number: 5 (lower is better)
Translates to: SLARCPWTGHSHFSGVLSPPPSS*YLMTLS
Trigger: GGACAACGTCATCAAATACAACGACGAAGGCGGCGG...GGAAAGGACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGCACCTGGCCAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS TCA 90 bp TGGGATTCGAAGTCCAGGCGCTTCTGCACTACGATGATGGCCTCCTaGGTGTCGCTGTCTGTGGTGACCTTGAACACATCGCCGCCGCTG +
Preference number: 5 (lower is better)
Translates to: WDSKSRRFCTTMMAS*VSLSVVTLNTSPPL
Trigger: CAGCGGCGGCGATGTGTTCAAGGTCACCACAGACAGCGACACTCAGGAGGCCATCATCGTAGTGCAGAAGCGCCTGGACTTCGAATCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474438.1
ENST00000537909.4
CDS GCA 90 bp ATGGGCAGGAAGAACACGTCCTGCTCCTGCCGGTTGAAGCCCACGTaGTGCGTGTGCACTGCAGCGGTGTTGTCTTGGATGTCAAGCAGA +
Preference number: 5 (lower is better)
Translates to: MGRKNTSCSCRLKPT*CVCTAAVLSWMSSR
Trigger: TCTGCTTGACATCCAAGACAACACCGCTGCAGTGCACACGCAGCACGTGGGCTTCAACCGGCAGGAGCAGGACGTGTTCTTCCTGCCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS CCA 90 bp TTGCCAGTCACGATGGCGCCTGTGTCCGCATCGATATCGAAGATCTaGTCCAAATCTGATTCGCGGTCAATGGCGTACCGGACGGGCCGG +
Preference number: 5 (lower is better)
Translates to: LPVTMAPVSASISKI*SKSDSRSMAYRTGR
Trigger: CCGGCCCGTCCGGTACGCCATTGACCGCGAATCAGATTTGGACCAGATCTTCGATATCGATGCGGACACAGGCGCCATCGTGACTGGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CAA 90 bp TCCTTTCCCCTTCTATTCCGTGCAGGACACCACCTCATGGTTTCTCTGACGACTTCGCGGTCCAGCCCCTaGCCAGTCACGATGGCGCCT +
Preference number: 5 (lower is better)
Translates to: SFPLLFRAGHHLMVSLTTSRSSP*PVTMAP
Trigger: AGGCGCCATCGTGACTGGCAAGGGGCTGGACCGCGA...AGTCGTCAGAGAAACCATGAGGTGGTGTCCTGCACGGAATAGAAGGGGAAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS GCA 90 bp CTGCAGCGGTGTTGTCTTGGATGTCAAGCAGAGAGAAATGAGGGTTaGTGGGAGCTTCAGGCACCAGGCGGAAATAGAAGCGGTGCCCGC +
Preference number: 5 (lower is better)
Translates to: LQRCCLGCQAERNEG*WELQAPGGNRSGAR
Trigger: GCGGGCACCGCTTCTATTTCCGCCTGGTGCCTGAAGCTCCCAGCAACCCTCATTTCTCTCTGCTTGACATCCAAGACAACACCGCTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CAA 90 bp GACGGGTCACAGCCACTTCTCTGGGGTCCTTTCCCCTTCTATTCCGTGCAGGACCGGGGCTCACTGTCATaGATGTCCTGCACCTTGATG +
Preference number: 5 (lower is better)
Translates to: DGSQPLLWGPFPFYSVQDRGSLS*MSCTLM
Trigger: CATCAAGGTGCAGGACATCAATGACAGTGAGCCCCG...GTCCTGCACGGAATAGAAGGGGAAAGGACCCCAGAGAAGTGGCTGTGACCCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CAA 90 bp TCCTTTCCCCTTCTATTCCGTGCAGGACACCACCTCATGGTTTCTCTGACGACTGCCAGCACTGTGATGTaGTGCCAGCCGGCCGTCTCG +
Preference number: 5 (lower is better)
Translates to: SFPLLFRAGHHLMVSLTTASTVM*CQPAVS
Trigger: CGAGACGGCCGGCTGGCACAACATCACAGTGCTGGC...AGTCGTCAGAGAAACCATGAGGTGGTGTCCTGCACGGAATAGAAGGGGAAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CAA 90 bp TGCCATTCACTGGCCAGGTGCCCTTGGACGGGTCACAGCCACTTCTCTGGGGTCTGCAGCGGTGTTGTCTaGGATGTCAAGCAGAGAGAA +
Preference number: 5 (lower is better)
Translates to: CHSLARCPWTGHSHFSGVCSGVV*DVKQRE
Trigger: TTCTCTCTGCTTGACATCCAAGACAACACCGCTGCA...GACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGCACCTGGCCAGTGAATGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CAA 90 bp TGCCATTCACTGGCCAGGTGCCCTTGGACGGGTCACAGCCACTTCTCTGGGGTCTCAGTTTTAATGCCGTaGGTCAGAATCCCGCACCTC +
Preference number: 5 (lower is better)
Translates to: CHSLARCPWTGHSHFSGVSVLMP*VRIPHL
Trigger: GAGGTGCGGGATTCTGACCAACGGCATTAAAACTGA...GACCCCAGAGAAGTGGCTGTGACCCGTCCAAGGGCACCTGGCCAGTGAATGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS TCA 90 bp CTCGTCCTTAAGGTGGTAAGTCATGTCTGTGTTCTCTCCCACGTCTaGGTCCTCAGCCTTCACACGTCCCACAGCCGTTCCAATGGGGGC +
Preference number: 5 (lower is better)
Translates to: LVLKVVSHVCVLSHV*VLSLHTSHSRSNGG
Trigger: GCCCCCATTGGAACGGCTGTGGGACGTGTGAAGGCTGAGGACTCAGACGTGGGAGAGAACACAGACATGACTTACCACCTTAAGGACGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474438.1
ENST00000537909.4
CDS CCA 90 bp CAGCGGTGTTGTCTTGGATGTCAAGCAGAGAGAAATGAGGGTTGCTaGGAGCTTCAGGCACCAGGCGGAAATAGAAGCGGTGCCCGCCTT +
Preference number: 5 (lower is better)
Translates to: QRCCLGCQAERNEGC*ELQAPGGNRSGARL
Trigger: AAGGCGGGCACCGCTTCTATTTCCGCCTGGTGCCTGAAGCTCCCAGCAACCCTCATTTCTCTCTGCTTGACATCCAAGACAACACCGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS-3UTR CAA 90 bp GTTGGTCAGAATCCCGCACCTCTGGGCTCCAAAGCTGCACCCCTAGAGGAGGAGCCTTCGTCGTTGTATTaGATGACGTTGTCCCGCATG +
Preference number: 5 (lower is better)
Translates to: VGQNPAPLGSKAAPLEEEPSSLY*MTLSRM
Trigger: CATGCGGGACAACGTCATCAAATACAACGACGAAGG...CTCCTCCTCTAGGGGTGCAGCTTTGGAGCCCAGAGGTGCGGGATTCTGACCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS GCA 90 bp CACGGAAAGGCTAAGTACCTTGTTGAAGGTCACACGTGTAGAAAGTaGATAGCCAGGACGCTGAGGCTTTGCAGCCCTGGACAGCAGGGG +
Preference number: 5 (lower is better)
Translates to: HGKAKYLVEGHTCRK*IARTLRLCSPGQQG
Trigger: CCCCTGCTGTCCAGGGCTGCAAAGCCTCAGCGTCCTGGCTATGCACTTTCTACACGTGTGACCTTCAACAAGGTACTTAGCCTTTCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474438.1
CDS CCA 90 bp GGGACACGACACTCTTCTCACTTGGAAACTGGTCCTGAAGCCTTGTaGTGTGTAGGATTCAGGTGCCATCTCTGGGTGTGTGTGAGTTGG +
Preference number: 5 (lower is better)
Translates to: GTRHSSHLETGPEAL*CVGFRCHLWVCVSW
Trigger: CCAACTCACACACACCCAGAGATGGCACCTGAATCCTACACACCACAAGGCTTCAGGACCAGTTTCCAAGTGAGAAGAGTGTCGTGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474438.1
CDS TCA 90 bp GGTCAAGGTCAGGCACAGCCGTCCGGATTACGCCTGTTTTATAGATaGGGAGACAGAGGCACGGAAAGGCTAAGTACCTTGTTGAAGGTC +
Preference number: 5 (lower is better)
Translates to: GQGQAQPSGLRLFYR*GDRGTERLSTLLKV
Trigger: GACCTTCAACAAGGTACTTAGCCTTTCCGTGCCTCTGTCTCCTCATCTATAAAACAGGCGTAATCCGGACGGCTGTGCCTGACCTTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474438.1
CDS TCA 90 bp TGTGTGCTAAGCTTTGTGCTGGTCACTTGCCATCCAGGACCTCAGTaGATGTACAGGATTCGTGGTAGGATGTGGAGTCACTGTGTATCT +
Preference number: 5 (lower is better)
Translates to: CVLSFVLVTCHPGPQ*MYRIRGRMWSHCVS
Trigger: AGATACACAGTGACTCCACATCCTACCACGAATCCTGTACATTCACTGAGGTCCTGGATGGCAAGTGACCAGCACAAAGCTTAGCACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474438.1
CDS TCA 72 bp CTCCCCCGCCCGCGCTGCCGCCCCCGTCGCCGCCCTTaGGCTCGCCGAAGTCGTAGAGGCTCCGCAGCGCCG +
Preference number: 6 (lower is better)
Translates to: LPRPRCRPRRRP*ARRSRRGSAAP
Trigger: CGGCGCTGCGGAGCCTCTACGACTTCGGCGAGCTCAAGGGCGGCGACGGGGGCGGCAGCGCGGGCGGGGGAG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS TCA 72 bp CCTGCTCGGAGCCCGACGAGCCGCTGTGCAGGGAGCTaGGCGAGGCGGCCGGCGAGTCCGCGCCCTCGAAGG +
Preference number: 6 (lower is better)
Translates to: PARSPTSRCAGS*ARRPASPRPRR
Trigger: CCTTCGAGGGCGCGGACTCGCCGGCCGCCTCGCTCAGCTCCCTGCACAGCGGCTCGTCGGGCTCCGAGCAGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS CCA 72 bp TCGTCCACGTCGGTCACGGCCACGCGCACGATCGCCTaGTCGCGGAACGTGCCCAGGTCGGCGAAGCGGGGG +
Preference number: 6 (lower is better)
Translates to: SSTSVTATRTIA*SRNVPRSAKRG
Trigger: CCCCCGCTTCGCCGACCTGGGCACGTTCCGCGACCAGGCGATCGTGCGCGTGGCCGTGACCGACGTGGACGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474438.1
ENST00000537909.4
CDS CCA 72 bp CTGATTCGCGGTCAATGGCGTACCGGACGGGCCGGTTaGCGGCGTCGGGGTCCCGCGCCGTCACCACGCCGA +
Preference number: 6 (lower is better)
Translates to: LIRGQWRTGRAG*RRRGPAPSPRR
Trigger: TCGGCGTGGTGACGGCGCGGGACCCCGACGCCGCCAACCGGCCCGTCCGGTACGCCATTGACCGCGAATCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS GCA 72 bp GAGGCACCAGGGCGCCGCTGCTTGGTCGCACAACGATaGGGCGCCGTGTCACATGGTGGCCTCAGCGCGGCC +
Preference number: 6 (lower is better)
Translates to: EAPGRRCLVAQR*GAVSHGGLSAA
Trigger: GGCCGCGCTGAGGCCACCATGTGACACGGCGCCGCATCGTTGTGCGACCAAGCAGCGGCGCCCTGGTGCCTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS CCA 72 bp CTTGGTCGCACAACGATGCGGCGCCGTGTCACATGGTaGCCTCAGCGCGGCCGCCGGGATGTCGCCCCCGAC +
Preference number: 6 (lower is better)
Translates to: LGRTTMRRRVTW*PQRGRRDVAPD
Trigger: GTCGGGGGCGACATCCCGGCGGCCGCGCTGAGGCCACCATGTGACACGGCGCCGCATCGTTGTGCGACCAAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS CCA 72 bp CTGCTTGGTCGCACAACGATGCGGCGCCGTGTCACATaGTGGCCTCAGCGCGGCCGCCGGGATGTCGCCCCC +
Preference number: 6 (lower is better)
Translates to: LLGRTTMRRRVT*WPQRGRRDVAP
Trigger: GGGGGCGACATCCCGGCGGCCGCGCTGAGGCCACCATGTGACACGGCGCCGCATCGTTGTGCGACCAAGCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS CAA 90 bp GCTGGGGCCCAGGAGCATGGACGAGAGGCACCAGGGCGCCGCTGCTaGGTCGCACAACGATGCGGCGCCGTGTCACATGGTGGCCTCAGC +
Preference number: 6 (lower is better)
Translates to: AGAQEHGREAPGRRC*VAQRCGAVSHGGLS
Trigger: GCTGAGGCCACCATGTGACACGGCGCCGCATCGTTGTGCGACCAAGCAGCGGCGCCCTGGTGCCTCTCGTCCATGCTCCTGGGCCCCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS GCA 72 bp TCACGGCCACGCGCACGATCGCCTGGTCGCGGAACGTaGCCAGGTCGGCGAAGCGGGGGTCCACGAACTTGT +
Preference number: 6 (lower is better)
Translates to: SRPRARSPGRGT*PGRRSGGPRTC
Trigger: ACAAGTTCGTGGACCCCCGCTTCGCCGACCTGGGCACGTTCCGCGACCAGGCGATCGTGCGCGTGGCCGTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474438.1
ENST00000537909.4
CDS GCA 72 bp GCTGCAGCCAGCAGCGCGGAGACCCCGCCAGTGCAGTaGCCGCCTCTGTGTCTGTCCCTCCTGGTTCTCTCC +
Preference number: 6 (lower is better)
Translates to: AAASSAETPPVQ*PPLCLSLLVLS
Trigger: GGAGAGAACCAGGAGGGACAGACACAGAGGCGGGCACTGCACTGGCGGGGTCTCCGCGCTGCTGGCTGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474438.1
CDS GCA 72 bp GTGTGGCTGCAGCCAGCAGCGCGGAGACCCCGCCAGTaGAGTGCCCGCCTCTGTGTCTGTCCCTCCTGGTTC +
Preference number: 6 (lower is better)
Translates to: VWLQPAARRPRQ*SARLCVCPSWF
Trigger: GAACCAGGAGGGACAGACACAGAGGCGGGCACTGCACTGGCGGGGTCTCCGCGCTGCTGGCTGCAGCCACAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474438.1
CDS CCA 72 bp CGTCGCCGCGTCGCGTGCGGATCACCAGGCAGCACCTaGACAGCTCCAGAGTCGGGGAAGCGCCATGGTTCC +
Preference number: 6 (lower is better)
Translates to: RRRVACGSPGST*TAPESGKRHGS
Trigger: GGAACCATGGCGCTTCCCCGACTCTGGAGCTGTCCAGGTGCTGCCTGGTGATCCGCACGCGACGCGGCGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS TCA 72 bp TGCCCAGGTCGGCGAAGCGGGGGTCCACGAACTTGTTaGGGGCCTCCAGGATCACGGTGTGCACGGGCTGGG +
Preference number: 6 (lower is better)
Translates to: CPGRRSGGPRTC*GPPGSRCARAG
Trigger: CCCAGCCCGTGCACACCGTGATCCTGGAGGCCCTCAACAAGTTCGTGGACCCCCGCTTCGCCGACCTGGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474438.1
ENST00000537909.4
CDS GCA 72 bp GATGGCCCAGTCGAGAGATCAGGGAGCCAGTGTGGCTaGAGCCAGCAGCGCGGAGACCCCGCCAGTGCAGTG +
Preference number: 6 (lower is better)
Translates to: DGPVERSGSQCG*SQQRGDPASAV
Trigger: CACTGCACTGGCGGGGTCTCCGCGCTGCTGGCTGCAGCCACACTGGCTCCCTGATCTCTCGACTGGGCCATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474438.1
CDS GCA 72 bp GCCCAGGAGCATGGACGAGAGGCACCAGGGCGCCGCTaGTTGGTCGCACAACGATGCGGCGCCGTGTCACAT +
Preference number: 6 (lower is better)
Translates to: AQEHGREAPGRR*LVAQRCGAVSH
Trigger: ATGTGACACGGCGCCGCATCGTTGTGCGACCAAGCAGCGGCGCCCTGGTGCCTCTCGTCCATGCTCCTGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS CAA 90 bp TGGTCGCGGAACGTGCCCAGGTCGGCGAAGCGGGGGTCCACGAACTaGTTGAGGGCCTCCAGGATCACGGTGTGCACGGGCTGGGATTCG +
Preference number: 6 (lower is better)
Translates to: WSRNVPRSAKRGSTN*LRASRITVCTGWDS
Trigger: CGAATCCCAGCCCGTGCACACCGTGATCCTGGAGGCCCTCAACAAGTTCGTGGACCCCCGCTTCGCCGACCTGGGCACGTTCCGCGACCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474438.1
ENST00000537909.4
CDS TCA 72 bp CAGTGCCACCTTGCGGCTGATGAAGTCCCTGAACACTaGGAAGTCTGGCTCGGGGCTCGGCGGCCCCTGCGG +
Preference number: 6 (lower is better)
Translates to: QCHLAADEVPEH*EVWLGARRPLR
Trigger: CCGCAGGGGCCGCCGAGCCCCGAGCCAGACTTCTCAGTGTTCAGGGACTTCATCAGCCGCAAGGTGGCACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS CCA 72 bp CAGCACCTGGACAGCTCCAGAGTCGGGGAAGCGCCATaGTTCCTGCGCAGAAAGGATGCGGGTTGGGGCCGG +
Preference number: 6 (lower is better)
Translates to: QHLDSSRVGEAP*FLRRKDAGWGR
Trigger: CCGGCCCCAACCCGCATCCTTTCTGCGCAGGAACCATGGCGCTTCCCCGACTCTGGAGCTGTCCAGGTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS CCA 72 bp AGGAGCATGGACGAGAGGCACCAGGGCGCCGCTGCTTaGTCGCACAACGATGCGGCGCCGTGTCACATGGTG +
Preference number: 6 (lower is better)
Translates to: RSMDERHQGAAA*SHNDAAPCHMV
Trigger: CACCATGTGACACGGCGCCGCATCGTTGTGCGACCAAGCAGCGGCGCCCTGGTGCCTCTCGTCCATGCTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS CAA 72 bp AACGTGCCCAGGTCGGCGAAGCGGGGGTCCACGAACTaGTTGAGGGCCTCCAGGATCACGGTGTGCACGGGC +
Preference number: 6 (lower is better)
Translates to: NVPRSAKRGSTN*LRASRITVCTG
Trigger: GCCCGTGCACACCGTGATCCTGGAGGCCCTCAACAAGTTCGTGGACCCCCGCTTCGCCGACCTGGGCACGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474438.1
ENST00000537909.4
CDS CAA 72 bp CAGGAGCATGGACGAGAGGCACCAGGGCGCCGCTGCTaGGTCGCACAACGATGCGGCGCCGTGTCACATGGT +
Preference number: 6 (lower is better)
Translates to: QEHGREAPGRRC*VAQRCGAVSHG
Trigger: ACCATGTGACACGGCGCCGCATCGTTGTGCGACCAAGCAGCGGCGCCCTGGTGCCTCTCGTCCATGCTCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS CAA 90 bp TCGCGGAACGTGCCCAGGTCGGCGAAGCGGGGGTCCACGAACTTGTaGAGGGCCTCCAGGATCACGGTGTGCACGGGCTGGGATTCGAAG +
Preference number: 6 (lower is better)
Translates to: SRNVPRSAKRGSTNL*RASRITVCTGWDSK
Trigger: CTTCGAATCCCAGCCCGTGCACACCGTGATCCTGGAGGCCCTCAACAAGTTCGTGGACCCCCGCTTCGCCGACCTGGGCACGTTCCGCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474438.1
ENST00000537909.4
CDS TCA 72 bp CAGCCGTCCGGATTACGCCGGTCTTGGGGTCCACGGTaGAGTGGTGCTCGCCGTCCAGCACGCTGTACACCA +
Preference number: 6 (lower is better)
Translates to: QPSGLRRSWGPR*SGARRPARCTP
Trigger: TGGTGTACAGCGTGCTGGACGGCGAGCACCACTTCACCGTGGACCCCAAGACCGGCGTAATCCGGACGGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS GCA 72 bp TGGACAGCTCCAGAGTCGGGGAAGCGCCATGGTTCCTaGGCAGAAAGGATGCGGGTTGGGGCCGGCAGATCC +
Preference number: 6 (lower is better)
Translates to: WTAPESGKRHGS*AERMRVGAGRS
Trigger: GGATCTGCCGGCCCCAACCCGCATCCTTTCTGCGCAGGAACCATGGCGCTTCCCCGACTCTGGAGCTGTCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS GCA 72 bp TGTTGTGCCAGCCGGCCGTCTCGCGGTCCAGCCCCTTaGCAGTCACGATGGCGCCTGTGTCCGCATCGATAT +
Preference number: 6 (lower is better)
Translates to: CCASRPSRGPAP*QSRWRLCPHRY
Trigger: ATATCGATGCGGACACAGGCGCCATCGTGACTGGCAAGGGGCTGGACCGCGAGACGGCCGGCTGGCACAACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS CCA 72 bp GAAGCGCCATGGTTCCTGCGCAGAAAGGATGCGGGTTaGGGCCGGCAGATCCTGCCAGGACTAGGGGCCTTC +
Preference number: 6 (lower is better)
Translates to: EAPWFLRRKDAG*GRQILPGLGAF
Trigger: GAAGGCCCCTAGTCCTGGCAGGATCTGCCGGCCCCAACCCGCATCCTTTCTGCGCAGGAACCATGGCGCTTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS CCA 72 bp GAGGCGGCCATGACAAAGGCCGTGGTGTTGCAGGACTaGATGGTGCCGGAGCTGTCGCAGCCACAGATGCGG +
Preference number: 6 (lower is better)
Translates to: EAAMTKAVVLQD*MVPELSQPQMR
Trigger: CCGCATCTGTGGCTGCGACAGCTCCGGCACCATCCAGTCCTGCAACACCACGGCCTTTGTCATGGCCGCCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS CAA 72 bp GGAAGCGCCATGGTTCCTGCGCAGAAAGGATGCGGGTaGGGGCCGGCAGATCCTGCCAGGACTAGGGGCCTT +
Preference number: 6 (lower is better)
Translates to: GSAMVPAQKGCG*GPADPARTRGL
Trigger: AAGGCCCCTAGTCCTGGCAGGATCTGCCGGCCCCAACCCGCATCCTTTCTGCGCAGGAACCATGGCGCTTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS CAA 72 bp ATGTTGTGCCAGCCGGCCGTCTCGCGGTCCAGCCCCTaGCCAGTCACGATGGCGCCTGTGTCCGCATCGATA +
Preference number: 6 (lower is better)
Translates to: MLCQPAVSRSSP*PVTMAPVSASI
Trigger: TATCGATGCGGACACAGGCGCCATCGTGACTGGCAAGGGGCTGGACCGCGAGACGGCCGGCTGGCACAACAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS TCA 72 bp GGATGGGCAGGAAGAACACGTCCTGCTCCTGCCGGTTaGAGCCCACGTGCTGCGTGTGCACTGCAGCGGTGT +
Preference number: 6 (lower is better)
Translates to: GWAGRTRPAPAG*SPRAACALQRC
Trigger: ACACCGCTGCAGTGCACACGCAGCACGTGGGCTTCAACCGGCAGGAGCAGGACGTGTTCTTCCTGCCCATCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS CCA 72 bp AAAGTGCATAGCCAGGACGCTGAGGCTTTGCAGCCCTaGACAGCAGGGGAGTGCAGCAGCCACCAGGCCAGG +
Preference number: 6 (lower is better)
Translates to: KVHSQDAEALQP*TAGECSSHQAR
Trigger: CCTGGCCTGGTGGCTGCTGCACTCCCCTGCTGTCCAGGGCTGCAAAGCCTCAGCGTCCTGGCTATGCACTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474438.1
CDS CCA 72 bp CGGCCGTCTCGCGGTCCAGCCCCTTGCCAGTCACGATaGCGCCTGTGTCCGCATCGATATCGAAGATCTGGT +
Preference number: 6 (lower is better)
Translates to: RPSRGPAPCQSR*RLCPHRYRRSG
Trigger: ACCAGATCTTCGATATCGATGCGGACACAGGCGCCATCGTGACTGGCAAGGGGCTGGACCGCGAGACGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS CAA 72 bp AGGATGGGCAGGAAGAACACGTCCTGCTCCTGCCGGTaGAAGCCCACGTGCTGCGTGTGCACTGCAGCGGTG +
Preference number: 6 (lower is better)
Translates to: RMGRKNTSCSCR*KPTCCVCTAAV
Trigger: CACCGCTGCAGTGCACACGCAGCACGTGGGCTTCAACCGGCAGGAGCAGGACGTGTTCTTCCTGCCCATCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS CAA 90 bp GCTGGGAGCTTCAGGCACCAGGCGGAAATAGAAGCGGTGCCCGCCTaGGGGCTCGTCTCTGTCCACCACGCTGATGGTCTGGATGAGCTG +
Preference number: 6 (lower is better)
Translates to: AGSFRHQAEIEAVPA*GLVSVHHADGLDEL
Trigger: CAGCTCATCCAGACCATCAGCGTGGTGGACAGAGACGAGCCCCAAGGCGGGCACCGCTTCTATTTCCGCCTGGTGCCTGAAGCTCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS CAA 90 bp AGCACTGTGATGTTGTGCCAGCCGGCCGTCTCGCGGTCCAGCCCCTaGCCAGTCACGATGGCGCCTGTGTCCGCATCGATATCGAAGATC +
Preference number: 6 (lower is better)
Translates to: STVMLCQPAVSRSSP*PVTMAPVSASISKI
Trigger: GATCTTCGATATCGATGCGGACACAGGCGCCATCGTGACTGGCAAGGGGCTGGACCGCGAGACGGCCGGCTGGCACAACATCACAGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS GCA 72 bp ACCACCAGGATGGGCAGGAAGAACACGTCCTGCTCCTaGCGGTTGAAGCCCACGTGCTGCGTGTGCACTGCA +
Preference number: 6 (lower is better)
Translates to: TTRMGRKNTSCS*RLKPTCCVCTA
Trigger: TGCAGTGCACACGCAGCACGTGGGCTTCAACCGGCAGGAGCAGGACGTGTTCTTCCTGCCCATCCTGGTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS CAA 72 bp TTCAGGCACCAGGCGGAAATAGAAGCGGTGCCCGCCTaGGGGCTCGTCTCTGTCCACCACGCTGATGGTCTG +
Preference number: 6 (lower is better)
Translates to: FRHQAEIEAVPA*GLVSVHHADGL
Trigger: CAGACCATCAGCGTGGTGGACAGAGACGAGCCCCAAGGCGGGCACCGCTTCTATTTCCGCCTGGTGCCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS CAA 72 bp CGCATGTCTTCATCCTCGTCCGAGCTCAGGTGGCTCTaGTGGTGGCGCCTGAGGGTGAGGATCAGCAGCACC +
Preference number: 6 (lower is better)
Translates to: RMSSSSSELRWL*WWRLRVRISST
Trigger: GGTGCTGCTGATCCTCACCCTCAGGCGCCACCACAAGAGCCACCTGAGCTCGGACGAGGATGAAGACATGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS CAA 90 bp TCTACCACCAGGATGGGCAGGAAGAACACGTCCTGCTCCTGCCGGTaGAAGCCCACGTGCTGCGTGTGCACTGCAGCGGTGTTGTCTTGG +
Preference number: 6 (lower is better)
Translates to: STTRMGRKNTSCSCR*KPTCCVCTAAVLSW
Trigger: CCAAGACAACACCGCTGCAGTGCACACGCAGCACGTGGGCTTCAACCGGCAGGAGCAGGACGTGTTCTTCCTGCCCATCCTGGTGGTAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS CAA 90 bp ACGTTGTCCCGCATGTCTTCATCCTCGTCCGAGCTCAGGTGGCTCTaGTGGTGGCGCCTGAGGGTGAGGATCAGCAGCACCAGCACAACC +
Preference number: 6 (lower is better)
Translates to: TLSRMSSSSSELRWL*WWRLRVRISSTSTT
Trigger: GGTTGTGCTGGTGCTGCTGATCCTCACCCTCAGGCGCCACCACAAGAGCCACCTGAGCTCGGACGAGGATGAAGACATGCGGGACAACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS TCA 72 bp CCACAGCCGTTCCAATGGGGGCTGACTCCTGGATGCTaGACTGGTACATCTTCTGCGGGAAACGGGGCGGGT +
Preference number: 6 (lower is better)
Translates to: PQPFQWGLTPGC*TGTSSAGNGAG
Trigger: ACCCGCCCCGTTTCCCGCAGAAGATGTACCAGTTCAGCATCCAGGAGTCAGCCCCCATTGGAACGGCTGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474438.1
ENST00000537909.4
CDS GCA 72 bp ACGTGTAGAAAGTGCATAGCCAGGACGCTGAGGCTTTaGAGCCCTGGACAGCAGGGGAGTGCAGCAGCCACC +
Preference number: 6 (lower is better)
Translates to: TCRKCIARTLRL*SPGQQGSAAAT
Trigger: GGTGGCTGCTGCACTCCCCTGCTGTCCAGGGCTGCAAAGCCTCAGCGTCCTGGCTATGCACTTTCTACACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474438.1
CDS GCA 72 bp TCCACGAACTTGTTGAGGGCCTCCAGGATCACGGTGTaGACGGGCTGGGATTCGAAGTCCAGGCGCTTCTGC +
Preference number: 6 (lower is better)
Translates to: STNLLRASRITV*TGWDSKSRRFC
Trigger: GCAGAAGCGCCTGGACTTCGAATCCCAGCCCGTGCACACCGTGATCCTGGAGGCCCTCAACAAGTTCGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474438.1
ENST00000537909.4
CDS GCA 72 bp GATGAGCTGGCCTGGCTTGGCATCCTCGCATACAGCTaGCTCGTAGGGTGTGGCCAGTTCTGGGGGATTGTC +
Preference number: 6 (lower is better)
Translates to: DELAWLGILAYS*LVGCGQFWGIV
Trigger: GACAATCCCCCAGAACTGGCCACACCCTACGAGGCAGCTGTATGCGAGGATGCCAAGCCAGGCCAGCTCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS CCA 72 bp TCTTCATCCTCGTCCGAGCTCAGGTGGCTCTTGTGGTaGCGCCTGAGGGTGAGGATCAGCAGCACCAGCACA +
Preference number: 6 (lower is better)
Translates to: SSSSSELRWLLW*RLRVRISSTST
Trigger: TGTGCTGGTGCTGCTGATCCTCACCCTCAGGCGCCACCACAAGAGCCACCTGAGCTCGGACGAGGATGAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS CCA 72 bp TTGTCCCGCATGTCTTCATCCTCGTCCGAGCTCAGGTaGCTCTTGTGGTGGCGCCTGAGGGTGAGGATCAGC +
Preference number: 6 (lower is better)
Translates to: LSRMSSSSSELR*LLWWRLRVRIS
Trigger: GCTGATCCTCACCCTCAGGCGCCACCACAAGAGCCACCTGAGCTCGGACGAGGATGAAGACATGCGGGACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS GCA 72 bp TGTTCTCACATCTGCTTCCTTGGCTCTTTGGCTCCGTaGCTGTTTCTCTCCACCCGTGCGCCTCTCTCCGCG +
Preference number: 6 (lower is better)
Translates to: CSHICFLGSLAP*LFLSTRAPLSA
Trigger: CGCGGAGAGAGGCGCACGGGTGGAGAGAAACAGGCACGGAGCCAAAGAGCCAAGGAAGCAGATGTGAGAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474438.1
CDS GCA 72 bp AAGAACACGTCCTGCTCCTGCCGGTTGAAGCCCACGTaGTGCGTGTGCACTGCAGCGGTGTTGTCTTGGATG +
Preference number: 6 (lower is better)
Translates to: KNTSCSCRLKPT*CVCTAAVLSWM
Trigger: CATCCAAGACAACACCGCTGCAGTGCACACGCAGCACGTGGGCTTCAACCGGCAGGAGCAGGACGTGTTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS CCA 72 bp TTGTTGAGGGCCTCCAGGATCACGGTGTGCACGGGCTaGGATTCGAAGTCCAGGCGCTTCTGCACTACGATG +
Preference number: 6 (lower is better)
Translates to: LLRASRITVCTG*DSKSRRFCTTM
Trigger: CATCGTAGTGCAGAAGCGCCTGGACTTCGAATCCCAGCCCGTGCACACCGTGATCCTGGAGGCCCTCAACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474438.1
ENST00000537909.4
CDS CAA 90 bp CTGGCTCGCCTGCCTGTCTCATTGACTGTTCTCACATCTGCTTCCTaGGCTCTTTGGCTCCGTGCCTGTTTCTCTCCACCCGTGCGCCTC +
Preference number: 6 (lower is better)
Translates to: LARLPVSLTVLTSAS*ALWLRACFSPPVRL
Trigger: GAGGCGCACGGGTGGAGAGAAACAGGCACGGAGCCAAAGAGCCAAGGAAGCAGATGTGAGAACAGTCAATGAGACAGGCAGGCGAGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474438.1
CDS GCA 72 bp CTCCTGCCGGTTGAAGCCCACGTGCTGCGTGTGCACTaGAGCGGTGTTGTCTTGGATGTCAAGCAGAGAGAA +
Preference number: 6 (lower is better)
Translates to: LLPVEAHVLRVH*SGVVLDVKQRE
Trigger: TTCTCTCTGCTTGACATCCAAGACAACACCGCTGCAGTGCACACGCAGCACGTGGGCTTCAACCGGCAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS CCA 72 bp ACACGTCCCACAGCCGTTCCAATGGGGGCTGACTCCTaGATGCTGAACTGGTACATCTTCTGCGGGAAACGG +
Preference number: 6 (lower is better)
Translates to: TRPTAVPMGADS*MLNWYIFCGKR
Trigger: CCGTTTCCCGCAGAAGATGTACCAGTTCAGCATCCAGGAGTCAGCCCCCATTGGAACGGCTGTGGGACGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474438.1
ENST00000537909.4
CDS CAA 90 bp CTCCTGGTTCTCTCCCTTATTGGCCTGGCTCGCCTGCCTGTCTCATaGACTGTTCTCACATCTGCTTCCTTGGCTCTTTGGCTCCGTGCC +
Preference number: 6 (lower is better)
Translates to: LLVLSLIGLARLPVS*TVLTSASLALWLRA
Trigger: GGCACGGAGCCAAAGAGCCAAGGAAGCAGATGTGAGAACAGTCAATGAGACAGGCAGGCGAGCCAGGCCAATAAGGGAGAGAACCAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474438.1
CDS TCA 72 bp AAGGTTTTCTGCTCGCGGTCCAGGCGCTCCATGGCATaGATGTCGCCTGTCAGCTCGTCGATCAGGAAGATG +
Preference number: 6 (lower is better)
Translates to: KVFCSRSRRSMA*MSPVSSSIRKM
Trigger: CATCTTCCTGATCGACGAGCTGACAGGCGACATTCATGCCATGGAGCGCCTGGACCGCGAGCAGAAAACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS CAA 72 bp TGGTACATCTTCTGCGGGAAACGGGGCGGGTTGTCATaGACGTCGGTGACTACGATGGTGACGGTAGTGGAG +
Preference number: 6 (lower is better)
Translates to: WYIFCGKRGGLS*TSVTTMVTVVE
Trigger: CTCCACTACCGTCACCATCGTAGTCACCGACGTCAATGACAACCCGCCCCGTTTCCCGCAGAAGATGTACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474438.1
ENST00000537909.4
CDS CAA 90 bp GATCCCAGGTGGAAAGGTGGAGAGGGAGTGACTTTAGCCGAGCACTaGCTGTGTGCTAAGCTTTGTGCTGGTCACTTGCCATCCAGGACC +
Preference number: 6 (lower is better)
Translates to: DPRWKGGEGVTLAEH*LCAKLCAGHLPSRT
Trigger: GGTCCTGGATGGCAAGTGACCAGCACAAAGCTTAGCACACAGCAAGTGCTCGGCTAAAGTCACTCCCTCTCCACCTTTCCACCTGGGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474438.1
CDS TCA 72 bp AAGTCCAGGCGCTTCTGCACTACGATGATGGCCTCCTaGGTGTCGCTGTCTGTGGTGACCTTGAACACATCG +
Preference number: 6 (lower is better)
Translates to: KSRRFCTTMMAS*VSLSVVTLNTS
Trigger: CGATGTGTTCAAGGTCACCACAGACAGCGACACTCAGGAGGCCATCATCGTAGTGCAGAAGCGCCTGGACTT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474438.1
ENST00000537909.4
CDS TCA 72 bp TGTGTCCGCATCGATATCGAAGATCTGGTCCAAATCTaGTTCGCGGTCAATGGCGTACCGGACGGGCCGGTT +
Preference number: 6 (lower is better)
Translates to: CVRIDIEDLVQI*FAVNGVPDGPV
Trigger: AACCGGCCCGTCCGGTACGCCATTGACCGCGAATCAGATTTGGACCAGATCTTCGATATCGATGCGGACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS CCA 72 bp GTGGTAGGATGTGGAGTCACTGTGTATCTATGGGCTTaGGCACCAAAGGCTCAGTGTCCCAGCTCTGAGTGG +
Preference number: 6 (lower is better)
Translates to: VVGCGVTVYLWA*APKAQCPSSEW
Trigger: CCACTCAGAGCTGGGACACTGAGCCTTTGGTGCCCAAGCCCATAGATACACAGTGACTCCACATCCTACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474438.1
CDS CCA 72 bp TCATTGACTGTTCTCACATCTGCTTCCTTGGCTCTTTaGCTCCGTGCCTGTTTCTCTCCACCCGTGCGCCTC +
Preference number: 6 (lower is better)
Translates to: SLTVLTSASLAL*LRACFSPPVRL
Trigger: GAGGCGCACGGGTGGAGAGAAACAGGCACGGAGCCAAAGAGCCAAGGAAGCAGATGTGAGAACAGTCAATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474438.1
CDS CCA 72 bp ACGATGGCGCCTGTGTCCGCATCGATATCGAAGATCTaGTCCAAATCTGATTCGCGGTCAATGGCGTACCGG +
Preference number: 6 (lower is better)
Translates to: TMAPVSASISKI*SKSDSRSMAYR
Trigger: CCGGTACGCCATTGACCGCGAATCAGATTTGGACCAGATCTTCGATATCGATGCGGACACAGGCGCCATCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS CAA 72 bp CTGAACTGGTACATCTTCTGCGGGAAACGGGGCGGGTaGTCATTGACGTCGGTGACTACGATGGTGACGGTA +
Preference number: 6 (lower is better)
Translates to: LNWYIFCGKRGG*SLTSVTTMVTV
Trigger: TACCGTCACCATCGTAGTCACCGACGTCAATGACAACCCGCCCCGTTTCCCGCAGAAGATGTACCAGTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474438.1
ENST00000537909.4
CDS CCA 72 bp CTTTGCTGTCCCTGTCACTTCCAGCTCCTGAGGAACTaGGGACACGACACTCTTCTCACTTGGAAACTGGTC +
Preference number: 6 (lower is better)
Translates to: LCCPCHFQLLRN*GHDTLLTWKLV
Trigger: GACCAGTTTCCAAGTGAGAAGAGTGTCGTGTCCCCAGTTCCTCAGGAGCTGGAAGTGACAGGGACAGCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474438.1
CDS CAA 72 bp GCTCCTGAGGAACTGGGGACACGACACTCTTCTCACTaGGAAACTGGTCCTGAAGCCTTGTGGTGTGTAGGA +
Preference number: 6 (lower is better)
Translates to: APEELGTRHSSH*ETGPEALWCVG
Trigger: TCCTACACACCACAAGGCTTCAGGACCAGTTTCCAAGTGAGAAGAGTGTCGTGTCCCCAGTTCCTCAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474438.1
CDS CAA 72 bp CTGCCTGTCTCATTGACTGTTCTCACATCTGCTTCCTaGGCTCTTTGGCTCCGTGCCTGTTTCTCTCCACCC +
Preference number: 6 (lower is better)
Translates to: LPVSLTVLTSAS*ALWLRACFSPP
Trigger: GGGTGGAGAGAAACAGGCACGGAGCCAAAGAGCCAAGGAAGCAGATGTGAGAACAGTCAATGAGACAGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474438.1
CDS CAA 90 bp CTGGGGACACGACACTCTTCTCACTTGGAAACTGGTCCTGAAGCCTaGTGGTGTGTAGGATTCAGGTGCCATCTCTGGGTGTGTGTGAGT +
Preference number: 6 (lower is better)
Translates to: LGTRHSSHLETGPEA*WCVGFRCHLWVCVS
Trigger: ACTCACACACACCCAGAGATGGCACCTGAATCCTACACACCACAAGGCTTCAGGACCAGTTTCCAAGTGAGAAGAGTGTCGTGTCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474438.1
CDS CAA 90 bp TCACTTCCAGCTCCTGAGGAACTGGGGACACGACACTCTTCTCACTaGGAAACTGGTCCTGAAGCCTTGTGGTGTGTAGGATTCAGGTGC +
Preference number: 6 (lower is better)
Translates to: SLPAPEELGTRHSSH*ETGPEALWCVGFRC
Trigger: GCACCTGAATCCTACACACCACAAGGCTTCAGGACCAGTTTCCAAGTGAGAAGAGTGTCGTGTCCCCAGTTCCTCAGGAGCTGGAAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474438.1
CDS GCA 72 bp GCTAAGTACCTTGTTGAAGGTCACACGTGTAGAAAGTaGATAGCCAGGACGCTGAGGCTTTGCAGCCCTGGA +
Preference number: 6 (lower is better)
Translates to: AKYLVEGHTCRK*IARTLRLCSPG
Trigger: TCCAGGGCTGCAAAGCCTCAGCGTCCTGGCTATGCACTTTCTACACGTGTGACCTTCAACAAGGTACTTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474438.1
CDS CCA 72 bp TGTCTTGGATGTCAAGCAGAGAGAAATGAGGGTTGCTaGGAGCTTCAGGCACCAGGCGGAAATAGAAGCGGT +
Preference number: 6 (lower is better)
Translates to: CLGCQAERNEGC*ELQAPGGNRSG
Trigger: ACCGCTTCTATTTCCGCCTGGTGCCTGAAGCTCCCAGCAACCCTCATTTCTCTCTGCTTGACATCCAAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537909.4
CDS CAA 72 bp CGACACTCTTCTCACTTGGAAACTGGTCCTGAAGCCTaGTGGTGTGTAGGATTCAGGTGCCATCTCTGGGTG +
Preference number: 6 (lower is better)
Translates to: RHSSHLETGPEA*WCVGFRCHLWV
Trigger: CACCCAGAGATGGCACCTGAATCCTACACACCACAAGGCTTCAGGACCAGTTTCCAAGTGAGAAGAGTGTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474438.1
CDS CAA 72 bp TGGAAAGGTGGAGAGGGAGTGACTTTAGCCGAGCACTaGCTGTGTGCTAAGCTTTGTGCTGGTCACTTGCCA +
Preference number: 6 (lower is better)
Translates to: WKGGEGVTLAEH*LCAKLCAGHLP
Trigger: TGGCAAGTGACCAGCACAAAGCTTAGCACACAGCAAGTGCTCGGCTAAAGTCACTCCCTCTCCACCTTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474438.1
CDS TCA 72 bp AGCTTTGTGCTGGTCACTTGCCATCCAGGACCTCAGTaGATGTACAGGATTCGTGGTAGGATGTGGAGTCAC +
Preference number: 6 (lower is better)
Translates to: SFVLVTCHPGPQ*MYRIRGRMWSH
Trigger: GTGACTCCACATCCTACCACGAATCCTGTACATTCACTGAGGTCCTGGATGGCAAGTGACCAGCACAAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474438.1
CDS CAA 72 bp GAGCACTTGCTGTGTGCTAAGCTTTGTGCTGGTCACTaGCCATCCAGGACCTCAGTGAATGTACAGGATTCG +
Preference number: 6 (lower is better)
Translates to: EHLLCAKLCAGH*PSRTSVNVQDS
Trigger: CGAATCCTGTACATTCACTGAGGTCCTGGATGGCAAGTGACCAGCACAAAGCTTAGCACACAGCAAGTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474438.1