RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDCA5 (Homo sapiens)

Ensembl gene IDs: ENSG00000146670

Ensembl transcript IDs: ENST00000275517.8, ENST00000404147.3, ENST00000462902.1, ENST00000479032.6, ENST00000524733.5, ENST00000525464.1, ENST00000527430.1, ENST00000529290.5, ENST00000531401.5, ENST00000533015.5

Found 270 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGTGAGTTTGGAGCACACCACTGGCGAGACTCCGGACAAGTCTTCTaGCCCCAGCAGCCCCTCGAAGCCAAAGCAGGACCGGCGGCCTGG +
Preference number: 1 (lower is better)
Translates to: GEFGAHHWRDSGQVF*PQQPLEAKAGPAAW
Trigger: CCAGGCCGCCGGTCCTGCTTTGGCTTCGAGGGGCTGCTGGGGGCAGAAGACTTGTCCGGAGTCTCGCCAGTGGTGTGCTCCAAACTCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527430.1
3UTR CCA 90 bp ACAGAAGGCAACTCAGGAGGGAGAGGCCGAGGCTGGCAGAGCCCCTaGGCCTATTTCCAAGCAGCCACCCCTCCCAACAAGAGCAGAGGT +
Preference number: 1 (lower is better)
Translates to: TEGNSGGRGRGWQSP*AYFQAATPPNKSRG
Trigger: ACCTCTGCTCTTGTTGGGAGGGGTGGCTGCTTGGAAATAGGCCCAGGGGCTCTGCCAGCCTCGGCCTCTCCCTCCTGAGTTGCCTTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
3UTR CCA 90 bp CCAGTGAGTGGCTGGGCCAGGCGGCCCCATTTCCTAAAACCAAGATaGCTGCCGCTGCTGCCCAAGCCCTCAAAGGCAGACAGTCCTCAT +
Preference number: 1 (lower is better)
Translates to: PVSGWARRPHFLKPR*LPLLPKPSKADSPH
Trigger: ATGAGGACTGTCTGCCTTTGAGGGCTTGGGCAGCAGCGGCAGCCATCTTGGTTTTAGGAAATGGGGCCGCCTGGCCCAGCCACTCACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
3UTR GCA 90 bp GGTTCAGCTCAAGGACACCTAGGCTTCCCCAGCAGGGGGCTTGCTTaGAGGTCTGACAAACCACAGAGCGTTGAGCAGATGGCCTGGGAC +
Preference number: 1 (lower is better)
Translates to: GSAQGHLGFPSRGLA*RSDKPQSVEQMAWD
Trigger: GTCCCAGGCCATCTGCTCAACGCTCTGTGGTTTGTCAGACCTGCAAGCAAGCCCCCTGCTGGGGAAGCCTAGGTGTCCTTGAGCTGAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275517.8
3UTR CCA 90 bp GCCTGGGACTCCCAGACCTGGCAGAGGGTTTTATTAGGGCCCGCCTaGCCTGCACCGTTTCATCCAAGTACCCTGACCCAGCACTCATCT +
Preference number: 1 (lower is better)
Translates to: AWDSQTWQRVLLGPA*PAPFHPSTLTQHSS
Trigger: AGATGAGTGCTGGGTCAGGGTACTTGGATGAAACGGTGCAGGCCAGGCGGGCCCTAATAAAACCCTCTGCCAGGTCTGGGAGTCCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
3UTR GCA 90 bp TGTAAGAAATGGGTATGGGTGACAAGAGGGGCCACCTTCCACCCCTaGAGCAGAGTGGTAAGACTCCAGCGTGGGCCCTGTGCAAGGGAC +
Preference number: 1 (lower is better)
Translates to: CKKWVWVTRGATFHP*SRVVRLQRGPCARD
Trigger: GTCCCTTGCACAGGGCCCACGCTGGAGTCTTACCACTCTGCTGCAGGGGTGGAAGGTGGCCCCTCTTGTCACCCATACCCATTTCTTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275517.8
3UTR GCA 90 bp GGACTCCCAGACCTGGCAGAGGGTTTTATTAGGGCCCGCCTGGCCTaGACCGTTTCATCCAAGTACCCTGACCCAGCACTCATCTTCCCT +
Preference number: 1 (lower is better)
Translates to: GLPDLAEGFIRARLA*TVSSKYPDPALIFP
Trigger: AGGGAAGATGAGTGCTGGGTCAGGGTACTTGGATGAAACGGTGCAGGCCAGGCGGGCCCTAATAAAACCCTCTGCCAGGTCTGGGAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
3UTR CCA 90 bp GATAGGAAGGACAGGACGACAAGAGACAGGACACCAGTGAGTGGCTaGGCCAGGCGGCCCCATTTCCTAAAACCAAGATGGCTGCCGCTG +
Preference number: 1 (lower is better)
Translates to: DRKDRTTRDRTPVSG*ARRPHFLKPRWLPL
Trigger: CAGCGGCAGCCATCTTGGTTTTAGGAAATGGGGCCGCCTGGCCCAGCCACTCACTGGTGTCCTGTCTCTTGTCGTCCTGTCCTTCCTATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
3UTR CCA 90 bp GACAAACCACAGAGCGTTGAGCAGATGGCCTGGGACTCCCAGACCTaGCAGAGGGTTTTATTAGGGCCCGCCTGGCCTGCACCGTTTCAT +
Preference number: 1 (lower is better)
Translates to: DKPQSVEQMAWDSQT*QRVLLGPAWPAPFH
Trigger: ATGAAACGGTGCAGGCCAGGCGGGCCCTAATAAAACCCTCTGCCAGGTCTGGGAGTCCCAGGCCATCTGCTCAACGCTCTGTGGTTTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
3UTR CCA 90 bp CTTGCTTGCAGGTCTGACAAACCACAGAGCGTTGAGCAGATGGCCTaGGACTCCCAGACCTGGCAGAGGGTTTTATTAGGGCCCGCCTGG +
Preference number: 1 (lower is better)
Translates to: LACRSDKPQSVEQMA*DSQTWQRVLLGPAW
Trigger: CCAGGCGGGCCCTAATAAAACCCTCTGCCAGGTCTGGGAGTCCCAGGCCATCTGCTCAACGCTCTGTGGTTTGTCAGACCTGCAAGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
3UTR TCA 90 bp GCCTCTCACCTCAACCCTCAGCCCTTTAACTTCTGGCTGGGCCACTaGTTCTCCTCCCCAGTCTGTGGCCCATCTGGAAACTGGCTATGG +
Preference number: 1 (lower is better)
Translates to: ASHLNPQPFNFWLGH*FSSPVCGPSGNWLW
Trigger: CCATAGCCAGTTTCCAGATGGGCCACAGACTGGGGAGGAGAATCAGTGGCCCAGCCAGAAGTTAAAGGGCTGAGGGTTGAGGTGAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
3UTR CCA 90 bp TTTCTGTTTCTCGGGTGGTGGGGAGATTCCAGGGAGAGTCATGTCTaGGGCCCAGGGCTTTGCACAAACCCTGGGGACCTCGGTGAGTTT +
Preference number: 1 (lower is better)
Translates to: FLFLGWWGDSRESHV*GPGLCTNPGDLGEF
Trigger: AAACTCACCGAGGTCCCCAGGGTTTGTGCAAAGCCCTGGGCCCCAGACATGACTCTCCCTGGAATCTCCCCACCACCCGAGAAACAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527430.1
3UTR GCA 90 bp CATGAGCCACAGAAACTCACAGCACCTGGTGGCCACACCCTGAAATaGACCCTTTGCTCCAAGCAGCCAGCGCCCTATCAACCTGGCATT +
Preference number: 1 (lower is better)
Translates to: HEPQKLTAPGGHTLK*TLCSKQPAPYQPGI
Trigger: AATGCCAGGTTGATAGGGCGCTGGCTGCTTGGAGCAAAGGGTGCATTTCAGGGTGTGGCCACCAGGTGCTGTGAGTTTCTGTGGCTCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275517.8
3UTR GCA 90 bp CCAAGAGTTCTGCTGCATCAGCCAGTGAGGACAAGAGTTCTTCAGTaGGGTTCAGCTCAAGGACACCTAGGCTTCCCCAGCAGGGGGCTT +
Preference number: 1 (lower is better)
Translates to: PRVLLHQPVRTRVLQ*GSAQGHLGFPSRGL
Trigger: AAGCCCCCTGCTGGGGAAGCCTAGGTGTCCTTGAGCTGAACCGCACTGAAGAACTCTTGTCCTCACTGGCTGATGCAGCAGAACTCTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275517.8
3UTR CCA 90 bp CTTCTGGCTGGGCCACTGATTCTCCTCCCCAGTCTGTGGCCCATCTaGAAACTGGCTATGGTACTTTGGGGAGATAGGAAGGACAGGACG +
Preference number: 1 (lower is better)
Translates to: LLAGPLILLPSLWPI*KLAMVLWGDRKDRT
Trigger: CGTCCTGTCCTTCCTATCTCCCCAAAGTACCATAGCCAGTTTCCAGATGGGCCACAGACTGGGGAGGAGAATCAGTGGCCCAGCCAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
3UTR CCA 90 bp CTCCTCCCCAGTCTGTGGCCCATCTGGAAACTGGCTATGGTACTTTaGGGAGATAGGAAGGACAGGACGACAAGAGACAGGACACCAGTG +
Preference number: 1 (lower is better)
Translates to: LLPSLWPIWKLAMVL*GDRKDRTTRDRTPV
Trigger: CACTGGTGTCCTGTCTCTTGTCGTCCTGTCCTTCCTATCTCCCCAAAGTACCATAGCCAGTTTCCAGATGGGCCACAGACTGGGGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
3UTR GCA 90 bp CAGAAACTCACAGCACCTGGTGGCCACACCCTGAAATGCACCCTTTaGTCCAAGCAGCCAGCGCCCTATCAACCTGGCATTTACCAAACA +
Preference number: 1 (lower is better)
Translates to: QKLTAPGGHTLKCTL*SKQPAPYQPGIYQT
Trigger: TGTTTGGTAAATGCCAGGTTGATAGGGCGCTGGCTGCTTGGAGCAAAGGGTGCATTTCAGGGTGTGGCCACCAGGTGCTGTGAGTTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275517.8
3UTR CCA 90 bp CAACCAGGAGATCAAACTGCTCAGCAGCTTCAAACTCGGCATTCATaGCCGCAGCCCACTCATCCAGCTCCGTTTTCAAGATCTCTGGCA +
Preference number: 1 (lower is better)
Translates to: QPGDQTAQQLQTRHS*PQPTHPAPFSRSLA
Trigger: TGCCAGAGATCTTGAAAACGGAGCTGGATGAGTGGGCTGCGGCCATGAATGCCGAGTTTGAAGCTGCTGAGCAGTTTGATCTCCTGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524733.5
3UTR CCA 90 bp GATCTCTGGCATTTTCTTCTTCTTACGTTTCTGTTTCTCGGGTGGTaGGGAGATTCCAGGGAGAGTCATGTCTGGGGCCCAGGGCTTTGC +
Preference number: 1 (lower is better)
Translates to: DLWHFLLLTFLFLGW*GDSRESHVWGPGLC
Trigger: GCAAAGCCCTGGGCCCCAGACATGACTCTCCCTGGAATCTCCCCACCACCCGAGAAACAGAAACGTAAGAAGAAGAAAATGCCAGAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527430.1
3UTR TCA 90 bp GCGGCAGGAGAGTCGGGGGCAGGGCAGCCTTCAAATCCACACTATTaGATCCACACGATGGAAAGAAGAGAAAGATGGGGAAATTCTCCA +
Preference number: 1 (lower is better)
Translates to: AAGESGAGQPSNPHY*IHTMERRERWGNSP
Trigger: TGGAGAATTTCCCCATCTTTCTCTTCTTTCCATCGTGTGGATTCAATAGTGTGGATTTGAAGGCTGCCCTGCCCCCGACTCTCCTGCCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275517.8
3UTR GCA 90 bp CAGCACTCATCTTCCCTGGCATTCTCTGTTATCCACCAGCTCCTCTaGACACCTCAGCGTCTACTTCCACGAACTTCTAAACATCAAAAG +
Preference number: 1 (lower is better)
Translates to: QHSSSLAFSVIHQLL*TPQRLLPRTSKHQK
Trigger: CTTTTGATGTTTAGAAGTTCGTGGAAGTAGACGCTGAGGTGTGCAGAGGAGCTGGTGGATAACAGAGAATGCCAGGGAAGATGAGTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
3UTR CCA 90 bp GAATCAAAGGGGAAACCCACGGAACTGAAAACCTCTTTACACAGGTaGGTTCAAGAAGAAAGCCACCAACAGAAGGCAACTCAGGAGGGA +
Preference number: 1 (lower is better)
Translates to: ESKGKPTELKTSLHR*VQEESHQQKATQEG
Trigger: TCCCTCCTGAGTTGCCTTCTGTTGGTGGCTTTCTTCTTGAACCCACCTGTGTAAAGAGGTTTTCAGTTCCGTGGGTTTCCCCTTTGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275517.8
3UTR TCA 90 bp TCTCTCTGGGACTATTTACAGAATCAAAGGGGAAACCCACGGAACTaGAAACCTCTTTACACAGGTGGGTTCAAGAAGAAAGCCACCAAC +
Preference number: 1 (lower is better)
Translates to: SLWDYLQNQRGNPRN*KPLYTGGFKKKATN
Trigger: GTTGGTGGCTTTCTTCTTGAACCCACCTGTGTAAAGAGGTTTTCAGTTCCGTGGGTTTCCCCTTTGATTCTGTAAATAGTCCCAGAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
3UTR GCA 90 bp ATGGAAAGAAGAGAAAGATGGGGAAATTCTCCAGAGATCATGAGATaGATCCAGGCAGTGTTCTCATGTGAGAGGATAGGGAGGCCAAAA +
Preference number: 1 (lower is better)
Translates to: MERRERWGNSPEIMR*IQAVFSCERIGRPK
Trigger: TTTTGGCCTCCCTATCCTCTCACATGAGAACACTGCCTGGATGCATCTCATGATCTCTGGAGAATTTCCCCATCTTTCTCTTCTTTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
3UTR TCA 90 bp GAACTTTGCAATGATGATCTCAACTCTGCATCATCTGGTGACTCCTaGTTCTGCAGGACTAAGACATTTCCCAAGAGTTCTGCTGCATCA +
Preference number: 1 (lower is better)
Translates to: ELCNDDLNSASSGDS*FCRTKTFPKSSAAS
Trigger: TGATGCAGCAGAACTCTTGGGAAATGTCTTAGTCCTGCAGAATCAGGAGTCACCAGATGATGCAGAGTTGAGATCATCATTGCAAAGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275517.8
3UTR CAA 90 bp TCTGGGGCCCAGGGCTTTGCACAAACCCTGGGGACCTCGGTGAGTTaGGAGCACACCACTGGCGAGACTCCGGACAAGTCTTCTGCCCCC +
Preference number: 2 (lower is better)
Translates to: SGAQGFAQTLGTSVS*EHTTGETPDKSSAP
Trigger: GGGGGCAGAAGACTTGTCCGGAGTCTCGCCAGTGGTGTGCTCCAAACTCACCGAGGTCCCCAGGGTTTGTGCAAAGCCCTGGGCCCCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527430.1
3UTR-3UTR CCA 90 bp CTGGGGACCTCGGTGAGTTTGGAGCACACCACTGGCGAGACTCCGGACAAGTCTGCACAGGAGTGCTGGTaGGGGTGGCAGGGACGCTGT +
Preference number: 2 (lower is better)
Translates to: LGTSVSLEHTTGETPDKSAQECW*GWQGRC
Trigger: ACAGCGTCCCTGCCACCCCCACCAGCACTCCTGTGC...AGACTTGTCCGGAGTCTCGCCAGTGGTGTGCTCCAAACTCACCGAGGTCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527430.1
3UTR-3UTR GCA 90 bp CCTGGGCCTATTTCCAAGCAGCCACCCCTCCCAACAAGAGCAGAGGTGCCTCTCGATGGCTGCCGCTGCTaGCCAAGCCCTCAAAGGCAG +
Preference number: 2 (lower is better)
Translates to: PGPISKQPPLPTRAEVPLDGCRC*PSPQRQ
Trigger: CTGCCTTTGAGGGCTTGGGCAGCAGCGGCAGCCATC...GAGAGGCACCTCTGCTCTTGTTGGGAGGGGTGGCTGCTTGGAAATAGGCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
3UTR-3UTR TCA 90 bp GGGCCCGCCTGGCCTGCACCGTTTCATCCAAGTACCCTGACCCAGCACTCATCTCTGGTGGCCACACCCTaGAATGCACCCTTTGCTCCA +
Preference number: 2 (lower is better)
Translates to: GPAWPAPFHPSTLTQHSSLVATP*NAPFAP
Trigger: TGGAGCAAAGGGTGCATTTCAGGGTGTGGCCACCAG...AGATGAGTGCTGGGTCAGGGTACTTGGATGAAACGGTGCAGGCCAGGCGGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275517.8
3UTR-3UTR CCA 90 bp GCTGGCAGAGCCCCTGGGCCTATTTCCAAGCAGCCACCCCTCCCAACAAGAGCACTCTCCACAGGGAGGTaGCTATGTACAGGACAGGAG +
Preference number: 2 (lower is better)
Translates to: AGRAPGPISKQPPLPTRALSTGR*LCTGQE
Trigger: CTCCTGTCCTGTACATAGCCACCTCCCTGTGGAGAG...TGCTCTTGTTGGGAGGGGTGGCTGCTTGGAAATAGGCCCAGGGGCTCTGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
3UTR-3UTR CCA 90 bp GAGCCACAGAAACTCACAGCACCTGGTGGCCACACCCTGAAATGCACCCTTTGCACACCAGTGAGTGGCTaGGCCAGGCGGCCCCATTTC +
Preference number: 2 (lower is better)
Translates to: EPQKLTAPGGHTLKCTLCTPVSG*ARRPHF
Trigger: GAAATGGGGCCGCCTGGCCCAGCCACTCACTGGTGT...GCAAAGGGTGCATTTCAGGGTGTGGCCACCAGGTGCTGTGAGTTTCTGTGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
3UTR-3UTR CCA 90 bp GTGCGGTTCAGCTCAAGGACACCTAGGCTTCCCCAGCAGGGGGCTTGCTTGCAGTTATTAGGGCCCGCCTaGCCTGCACCGTTTCATCCA +
Preference number: 2 (lower is better)
Translates to: VRFSSRTPRLPQQGACLQLLGPA*PAPFHP
Trigger: TGGATGAAACGGTGCAGGCCAGGCGGGCCCTAATAA...CTGCAAGCAAGCCCCCTGCTGGGGAAGCCTAGGTGTCCTTGAGCTGAACCGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275517.8
3UTR-3UTR CCA 90 bp GCAGCCACCCCTCCCAACAAGAGCAGAGGTGCCTCTCACCTCAACCCTCAGCCCTTTCTGTTTCTCGGGTaGTGGGGAGATTCCAGGGAG +
Preference number: 2 (lower is better)
Translates to: AATPPNKSRGASHLNPQPFLFLG*WGDSRE
Trigger: CTCCCTGGAATCTCCCCACCACCCGAGAAACAGAAA...GGGCTGAGGGTTGAGGTGAGAGGCACCTCTGCTCTTGTTGGGAGGGGTGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524733.5
3UTR-3UTR CCA 90 bp GCTCTCCTTCCTTGGAGCTGGACTCGGCCTCAGGGTTCGGCACAGGAGTGCTGGTTTCTGTTTCTCGGGTaGTGGGGAGATTCCAGGGAG +
Preference number: 2 (lower is better)
Translates to: ALLPWSWTRPQGSAQECWFLFLG*WGDSRE
Trigger: CTCCCTGGAATCTCCCCACCACCCGAGAAACAGAAA...CCAGCACTCCTGTGCCGAACCCTGAGGCCGAGTCCAGCTCCAAGGAAGGAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527430.1
3UTR-3UTR CCA 90 bp ACCTCGGTGAGTTTGGAGCACACCACTGGCGAGACTCCGGACAAGTCTTCTGCCCTCCTTCCTTGGAGCTaGACTCGGCCTCAGGGTTCG +
Preference number: 2 (lower is better)
Translates to: TSVSLEHTTGETPDKSSALLPWS*TRPQGS
Trigger: CGAACCCTGAGGCCGAGTCCAGCTCCAAGGAAGGAG...GGCAGAAGACTTGTCCGGAGTCTCGCCAGTGGTGTGCTCCAAACTCACCGAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527430.1
3UTR-3UTR TCA 90 bp GGGCCCGCCTGGCCTGCACCGTTTCATCCAAGTACCCTGACCCAGCACTCATCTTCAGACTCCACAGGCTaGATGTCCAGCTTCTTCCTC +
Preference number: 2 (lower is better)
Translates to: GPAWPAPFHPSTLTQHSSSDSTG*MSSFFL
Trigger: GAGGAAGAAGCTGGACATTCAGCCTGTGGAGTCTGA...AGATGAGTGCTGGGTCAGGGTACTTGGATGAAACGGTGCAGGCCAGGCGGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275517.8
3UTR-3UTR CCA 90 bp CCTGGGCCTATTTCCAAGCAGCCACCCCTCCCAACAAGAGCAGAGGTGCCTCTCCTCTCCACAGGGAGGTaGCTATGTACAGGACAGGAG +
Preference number: 2 (lower is better)
Translates to: PGPISKQPPLPTRAEVPLLSTGR*LCTGQE
Trigger: CTCCTGTCCTGTACATAGCCACCTCCCTGTGGAGAG...GAGAGGCACCTCTGCTCTTGTTGGGAGGGGTGGCTGCTTGGAAATAGGCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
3UTR-3UTR CCA 90 bp GTGCGGTTCAGCTCAAGGACACCTAGGCTTCCCCAGCAGGGGGCTTGCTTGCAGTTCCTAAAACCAAGATaGCTGCCGCTGCTGCCCAAG +
Preference number: 2 (lower is better)
Translates to: VRFSSRTPRLPQQGACLQFLKPR*LPLLPK
Trigger: CTTGGGCAGCAGCGGCAGCCATCTTGGTTTTAGGAA...CTGCAAGCAAGCCCCCTGCTGGGGAAGCCTAGGTGTCCTTGAGCTGAACCGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000275517.8
3UTR-3UTR CCA 90 bp TACACAGGTGGGTTCAAGAAGAAAGCCACCAACAGAAGGCAACTCAGGAGGGAGGGGAGAGGCCGAGGCTaGCAGAGCCCCTGGGCCTAT +
Preference number: 2 (lower is better)
Translates to: YTGGFKKKATNRRQLRREGRGRG*QSPWAY
Trigger: ATAGGCCCAGGGGCTCTGCCAGCCTCGGCCTCTCCC...CTCCCTCCTGAGTTGCCTTCTGTTGGTGGCTTTCTTCTTGAACCCACCTGTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
3UTR-3UTR CCA 90 bp CTGGGGACCTCGGTGAGTTTGGAGCACACCACTGGCGAGACTCCGGACAAGTCTCTCCTGCGAGGTGATTaGACAGCTGGGACCTCTACA +
Preference number: 2 (lower is better)
Translates to: LGTSVSLEHTTGETPDKSLLRGD*TAGTST
Trigger: TGTAGAGGTCCCAGCTGTCCAATCACCTCGCAGGAG...AGACTTGTCCGGAGTCTCGCCAGTGGTGTGCTCCAAACTCACCGAGGTCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527430.1
3UTR-3UTR GCA 90 bp CACAGGTGGGTTCAAGAAGAAAGCCACCAACAGAAGGCAACTCAGGAGGGAGAGGATGGCTGCCGCTGCTaGCCAAGCCCTCAAAGGCAG +
Preference number: 2 (lower is better)
Translates to: HRWVQEESHQQKATQEGEDGCRC*PSPQRQ
Trigger: CTGCCTTTGAGGGCTTGGGCAGCAGCGGCAGCCATC...CTCTCCCTCCTGAGTTGCCTTCTGTTGGTGGCTTTCTTCTTGAACCCACCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
3UTR CAA 90 bp ACTTTCTTAGACATTTCCAAGTCTCTGGCGTCCAGCTCTCCTTCCTaGGAGCTGGACTCGGCCTCAGGGTTCGGCACAGGAGTGCTGGTG +
Preference number: 2 (lower is better)
Translates to: TFLDISKSLASSSPS*ELDSASGFGTGVLV
Trigger: CACCAGCACTCCTGTGCCGAACCCTGAGGCCGAGTCCAGCTCCAAGGAAGGAGAGCTGGACGCCAGAGACTTGGAAATGTCTAAGAAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527430.1
3UTR-3UTR TCA 90 bp ACAAGAGCAGAGGTGCCTCTCACCTCAACCCTCAGCCCTTTAACTTCTGGCTGGTTCTGGCTGGGCCACTaGTTCTCCTCCCCAGTCTGT +
Preference number: 2 (lower is better)
Translates to: TRAEVPLTSTLSPLTSGWFWLGH*FSSPVC
Trigger: ACAGACTGGGGAGGAGAATCAGTGGCCCAGCCAGAA...CCAGCCAGAAGTTAAAGGGCTGAGGGTTGAGGTGAGAGGCACCTCTGCTCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
3UTR-3UTR TCA 90 bp TTCTTAGACATTTCCAAGTCTCTGGCGTCCAGCTCTCCTTCCTTGGAGCTGGACAGGGCTCCTGCGAGGTaGTTGGACAGCTGGGACCTC +
Preference number: 2 (lower is better)
Translates to: FLDISKSLASSSPSLELDRAPAR*LDSWDL
Trigger: GAGGTCCCAGCTGTCCAATCACCTCGCAGGAGCCCT...GTCCAGCTCCAAGGAAGGAGAGCTGGACGCCAGAGACTTGGAAATGTCTAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527430.1
3UTR-3UTR GCA 90 bp AGGTGGGTTCAAGAAGAAAGCCACCAACAGAAGGCAACTCAGGAGGGAGAGGCCGGCAGACAGTCCTCATaGGCAGCACCAGCACACACA +
Preference number: 2 (lower is better)
Translates to: RWVQEESHQQKATQEGEAGRQSS*AAPAHT
Trigger: TGTGTGTGCTGGTGCTGCGCATGAGGACTGTCTGCC...GGCCTCTCCCTCCTGAGTTGCCTTCTGTTGGTGGCTTTCTTCTTGAACCCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
3UTR-3UTR GCA 90 bp CCTCCCAACAAGAGCAGAGGTGCCTCTCACCTCAACCCTCAGCCCTTTAACTTCGGCAGACAGTCCTCATaGGCAGCACCAGCACACACA +
Preference number: 2 (lower is better)
Translates to: PPNKSRGASHLNPQPFNFGRQSS*AAPAHT
Trigger: TGTGTGTGCTGGTGCTGCGCATGAGGACTGTCTGCC...GAAGTTAAAGGGCTGAGGGTTGAGGTGAGAGGCACCTCTGCTCTTGTTGGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
3UTR-3UTR CCA 90 bp CAGCCACCCCTCCCAACAAGAGCAGAGGTGCCTCTCACCTCAACCCTCAGCCCTAGTCTGTGGCCCATCTaGAAACTGGCTATGGTACTT +
Preference number: 2 (lower is better)
Translates to: QPPLPTRAEVPLTSTLSPSLWPI*KLAMVL
Trigger: AAGTACCATAGCCAGTTTCCAGATGGGCCACAGACT...AGGGCTGAGGGTTGAGGTGAGAGGCACCTCTGCTCTTGTTGGGAGGGGTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
3UTR-3UTR CCA 90 bp CTGGCCTGCACCGTTTCATCCAAGTACCCTGACCCAGCACTCATCTTCCCTGGCGAAACTCACAGCACCTaGTGGCCACACCCTGAAATG +
Preference number: 2 (lower is better)
Translates to: LACTVSSKYPDPALIFPGETHST*WPHPEM
Trigger: CATTTCAGGGTGTGGCCACCAGGTGCTGTGAGTTTC...GCCAGGGAAGATGAGTGCTGGGTCAGGGTACTTGGATGAAACGGTGCAGGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275517.8
3UTR-3UTR CCA 90 bp GACCTGGCAGAGGGTTTTATTAGGGCCCGCCTGGCCTGCACCGTTTCATCCAAGTGTAAGAAATGGGTATaGGTGACAAGAGGGGCCACC +
Preference number: 2 (lower is better)
Translates to: DLAEGFIRARLACTVSSKCKKWV*VTRGAT
Trigger: GGTGGCCCCTCTTGTCACCCATACCCATTTCTTACA...CTTGGATGAAACGGTGCAGGCCAGGCGGGCCCTAATAAAACCCTCTGCCAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275517.8
3UTR CAA 90 bp ACAGAAACTCACAGCACCTGGTGGCCACACCCTGAAATGCACCCTTaGCTCCAAGCAGCCAGCGCCCTATCAACCTGGCATTTACCAAAC +
Preference number: 2 (lower is better)
Translates to: TETHSTWWPHPEMHP*LQAASALSTWHLPN
Trigger: GTTTGGTAAATGCCAGGTTGATAGGGCGCTGGCTGCTTGGAGCAAAGGGTGCATTTCAGGGTGTGGCCACCAGGTGCTGTGAGTTTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275517.8
3UTR-3UTR GCA 90 bp CTGGCAGAGGGTTTTATTAGGGCCCGCCTGGCCTGCACCGTTTCATCCAAGTACCCTCCAAGACAGAATTaGCCTCAGCCCACGAATTCT +
Preference number: 2 (lower is better)
Translates to: LAEGFIRARLACTVSSKYPPRQN*PQPTNS
Trigger: AGAATTCGTGGGCTGAGGGCAATTCTGTCTTGGAGG...GTACTTGGATGAAACGGTGCAGGCCAGGCGGGCCCTAATAAAACCCTCTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
3UTR-3UTR CCA 90 bp CTGATTCTCCTCCCCAGTCTGTGGCCCATCTGGAAACTGGCTATGGTACTTTGGCAAACTCGGCATTCATaGCCGCAGCCCACTCATCCA +
Preference number: 2 (lower is better)
Translates to: LILLPSLWPIWKLAMVLWQTRHS*PQPTHP
Trigger: TGGATGAGTGGGCTGCGGCCATGAATGCCGAGTTTG...CCAAAGTACCATAGCCAGTTTCCAGATGGGCCACAGACTGGGGAGGAGAATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524733.5
3UTR-3UTR CCA 90 bp GGCCCATCTGGAAACTGGCTATGGTACTTTGGGGAGATAGGAAGGACAGGACGAGGCCCATCTGGAAACTaGCTATGGTACTTTGGGGAG +
Preference number: 2 (lower is better)
Translates to: GPSGNWLWYFGEIGRTGRGPSGN*LWYFGE
Trigger: CTCCCCAAAGTACCATAGCCAGTTTCCAGATGGGCC...TCGTCCTGTCCTTCCTATCTCCCCAAAGTACCATAGCCAGTTTCCAGATGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
3UTR-3UTR CCA 90 bp GGCCCATCTGGAAACTGGCTATGGTACTTTGGGGAGATAGGAAGGACAGGACGACCTTTAACTTCTGGCTaGGCCACTGATTCTCCTCCC +
Preference number: 2 (lower is better)
Translates to: GPSGNWLWYFGEIGRTGRPLTSG*ATDSPP
Trigger: GGGAGGAGAATCAGTGGCCCAGCCAGAAGTTAAAGG...TCGTCCTGTCCTTCCTATCTCCCCAAAGTACCATAGCCAGTTTCCAGATGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
3UTR-3UTR TCA 90 bp ACAAACCACAGAGCGTTGAGCAGATGGCCTGGGACTCCCAGACCTGGCAGAGGGTCAAATCCACACTATTaGATCCACACGATGGAAAGA +
Preference number: 2 (lower is better)
Translates to: TNHRALSRWPGTPRPGRGSNPHY*IHTMER
Trigger: TCTTTCCATCGTGTGGATTCAATAGTGTGGATTTGA...CCCTCTGCCAGGTCTGGGAGTCCCAGGCCATCTGCTCAACGCTCTGTGGTTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275517.8
3UTR-3UTR GCA 90 bp CACCTCAGCGTCTACTTCCACGAACTTCTAAACATCAAAAGGTACAATGGCCAGCAAGATGGCTGCCGCTaGTGCCCAAGCCCTCAAAGG +
Preference number: 2 (lower is better)
Translates to: HLSVYFHELLNIKRYNGQQDGCR*CPSPQR
Trigger: CCTTTGAGGGCTTGGGCAGCAGCGGCAGCCATCTTG...CTGGCCATTGTACCTTTTGATGTTTAGAAGTTCGTGGAAGTAGACGCTGAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
3UTR-3UTR CCA 90 bp CCCAGTCTGTGGCCCATCTGGAAACTGGCTATGGTACTTTGGGGAGATAGGAAGCTGGCTATGGTACTTTaGGGAGATAGGAAGGACAGG +
Preference number: 2 (lower is better)
Translates to: PSLWPIWKLAMVLWGDRKLAMVL*GDRKDR
Trigger: CCTGTCCTTCCTATCTCCCCAAAGTACCATAGCCAG...CTTCCTATCTCCCCAAAGTACCATAGCCAGTTTCCAGATGGGCCACAGACTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
3UTR-3UTR CCA 90 bp GAGCCACAGAAACTCACAGCACCTGGTGGCCACACCCTGAAATGCACCCTTTGCTCTGGAAACTGGCTATaGTACTTTGGGGAGATAGGA +
Preference number: 2 (lower is better)
Translates to: EPQKLTAPGGHTLKCTLCSGNWL*YFGEIG
Trigger: TCCTATCTCCCCAAAGTACCATAGCCAGTTTCCAGA...GCAAAGGGTGCATTTCAGGGTGTGGCCACCAGGTGCTGTGAGTTTCTGTGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
3UTR-3UTR CCA 90 bp AGGCTCCCTACATCCTTCAAAACTCAGACTCCACAGGCTGAATGTCCAGCTTCTGGCCCATCTGGAAACTaGCTATGGTACTTTGGGGAG +
Preference number: 2 (lower is better)
Translates to: RLPTSFKTQTPQAECPASGPSGN*LWYFGE
Trigger: CTCCCCAAAGTACCATAGCCAGTTTCCAGATGGGCC...AGAAGCTGGACATTCAGCCTGTGGAGTCTGAGTTTTGAAGGATGTAGGGAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275517.8
3UTR-3UTR CCA 90 bp CCCAGTCTGTGGCCCATCTGGAAACTGGCTATGGTACTTTGGGGAGATAGGAAGAGTCTGTGGCCCATCTaGAAACTGGCTATGGTACTT +
Preference number: 2 (lower is better)
Translates to: PSLWPIWKLAMVLWGDRKSLWPI*KLAMVL
Trigger: AAGTACCATAGCCAGTTTCCAGATGGGCCACAGACT...CTTCCTATCTCCCCAAAGTACCATAGCCAGTTTCCAGATGGGCCACAGACTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
3UTR-3UTR CCA 90 bp GACAAGAGTTCTTCAGTGCGGTTCAGCTCAAGGACACCTAGGCTTCCCCAGCAGACCTCTTTACACAGGTaGGTTCAAGAAGAAAGCCAC +
Preference number: 2 (lower is better)
Translates to: DKSSSVRFSSRTPRLPQQTSLHR*VQEESH
Trigger: GTGGCTTTCTTCTTGAACCCACCTGTGTAAAGAGGT...CTGCTGGGGAAGCCTAGGTGTCCTTGAGCTGAACCGCACTGAAGAACTCTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
3UTR-3UTR CCA 90 bp GACCTGGCAGAGGGTTTTATTAGGGCCCGCCTGGCCTGCACCGTTTCATCCAAGCCCACGAATTCTCTCTaGGACTATTTACAGAATCAA +
Preference number: 2 (lower is better)
Translates to: DLAEGFIRARLACTVSSKPTNSL*DYLQNQ
Trigger: TTGATTCTGTAAATAGTCCCAGAGAGAATTCGTGGG...CTTGGATGAAACGGTGCAGGCCAGGCGGGCCCTAATAAAACCCTCTGCCAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
3UTR-3UTR TCA 90 bp ATCCAGGCAGTGTTCTCATGTGAGAGGATAGGGAGGCCAAAAACTAAAATTGCTTTCTGGCTGGGCCACTaGTTCTCCTCCCCAGTCTGT +
Preference number: 2 (lower is better)
Translates to: IQAVFSCERIGRPKTKIAFWLGH*FSSPVC
Trigger: ACAGACTGGGGAGGAGAATCAGTGGCCCAGCCAGAA...AGCAATTTTAGTTTTTGGCCTCCCTATCCTCTCACATGAGAACACTGCCTGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000275517.8
3UTR-3UTR CCA 90 bp TACACAGGTGGGTTCAAGAAGAAAGCCACCAACAGAAGGCAACTCAGGAGGGAGTCTGGAAACTGGCTATaGTACTTTGGGGAGATAGGA +
Preference number: 2 (lower is better)
Translates to: YTGGFKKKATNRRQLRRESGNWL*YFGEIG
Trigger: TCCTATCTCCCCAAAGTACCATAGCCAGTTTCCAGA...CTCCCTCCTGAGTTGCCTTCTGTTGGTGGCTTTCTTCTTGAACCCACCTGTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
3UTR-3UTR GCA 90 bp ACAGAGAACTTTGCAATGATGATCTCAACTCTGCATCATCTGGTGACTCCTGATAGCAGGGGGCTTGCTTaGAGGTCTGACAAACCACAG +
Preference number: 2 (lower is better)
Translates to: TENFAMMISTLHHLVTPDSRGLA*RSDKPQ
Trigger: CTGTGGTTTGTCAGACCTGCAAGCAAGCCCCCTGCT...ATCAGGAGTCACCAGATGATGCAGAGTTGAGATCATCATTGCAAAGTTCTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275517.8
3UTR-3UTR CCA 90 bp CACCTCAGCGTCTACTTCCACGAACTTCTAAACATCAAAAGGTACAATGGCCAGTTATTTTGTAAGAAATaGGTATGGGTGACAAGAGGG +
Preference number: 2 (lower is better)
Translates to: HLSVYFHELLNIKRYNGQLFCKK*VWVTRG
Trigger: CCCTCTTGTCACCCATACCCATTTCTTACAAAATAA...CTGGCCATTGTACCTTTTGATGTTTAGAAGTTCGTGGAAGTAGACGCTGAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275517.8
3UTR GCA 72 bp GGAGCACACCACTGGCGAGACTCCGGACAAGTCTTCTaGCCCCAGCAGCCCCTCGAAGCCAAAGCAGGACCG +
Preference number: 3 (lower is better)
Translates to: GAHHWRDSGQVF*PQQPLEAKAGP
Trigger: CGGTCCTGCTTTGGCTTCGAGGGGCTGCTGGGGGCAGAAGACTTGTCCGGAGTCTCGCCAGTGGTGTGCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527430.1
3UTR TCA 72 bp GGGCCCAGGGCTTTGCACAAACCCTGGGGACCTCGGTaGGTTTGGAGCACACCACTGGCGAGACTCCGGACA +
Preference number: 3 (lower is better)
Translates to: GPRALHKPWGPR*VWSTPLARLRT
Trigger: TGTCCGGAGTCTCGCCAGTGGTGTGCTCCAAACTCACCGAGGTCCCCAGGGTTTGTGCAAAGCCCTGGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527430.1
3UTR CCA 72 bp CCAAGTCTCTGGCGTCCAGCTCTCCTTCCTTGGAGCTaGACTCGGCCTCAGGGTTCGGCACAGGAGTGCTGG +
Preference number: 3 (lower is better)
Translates to: PSLWRPALLPWS*TRPQGSAQECW
Trigger: CCAGCACTCCTGTGCCGAACCCTGAGGCCGAGTCCAGCTCCAAGGAAGGAGAGCTGGACGCCAGAGACTTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527430.1
3UTR CCA 72 bp AACCCTGGGGACCTCGGTGAGTTTGGAGCACACCACTaGCGAGACTCCGGACAAGTCTTCTGCCCCCAGCAG +
Preference number: 3 (lower is better)
Translates to: NPGDLGEFGAHH*RDSGQVFCPQQ
Trigger: CTGCTGGGGGCAGAAGACTTGTCCGGAGTCTCGCCAGTGGTGTGCTCCAAACTCACCGAGGTCCCCAGGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527430.1
3UTR TCA 72 bp AGCCACAGAAACTCACAGCACCTGGTGGCCACACCCTaGAATGCACCCTTTGCTCCAAGCAGCCAGCGCCCT +
Preference number: 3 (lower is better)
Translates to: SHRNSQHLVATP*NAPFAPSSQRP
Trigger: AGGGCGCTGGCTGCTTGGAGCAAAGGGTGCATTTCAGGGTGTGGCCACCAGGTGCTGTGAGTTTCTGTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275517.8
3UTR GCA 72 bp GACCTGGCAGAGGGTTTTATTAGGGCCCGCCTGGCCTaGACCGTTTCATCCAAGTACCCTGACCCAGCACTC +
Preference number: 3 (lower is better)
Translates to: DLAEGFIRARLA*TVSSKYPDPAL
Trigger: GAGTGCTGGGTCAGGGTACTTGGATGAAACGGTGCAGGCCAGGCGGGCCCTAATAAAACCCTCTGCCAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
3UTR GCA 72 bp GATTCCAGGGAGAGTCATGTCTGGGGCCCAGGGCTTTaGACAAACCCTGGGGACCTCGGTGAGTTTGGAGCA +
Preference number: 3 (lower is better)
Translates to: DSRESHVWGPGL*TNPGDLGEFGA
Trigger: TGCTCCAAACTCACCGAGGTCCCCAGGGTTTGTGCAAAGCCCTGGGCCCCAGACATGACTCTCCCTGGAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527430.1
3UTR CCA 72 bp TCCCAGACCTGGCAGAGGGTTTTATTAGGGCCCGCCTaGCCTGCACCGTTTCATCCAAGTACCCTGACCCAG +
Preference number: 3 (lower is better)
Translates to: SQTWQRVLLGPA*PAPFHPSTLTQ
Trigger: CTGGGTCAGGGTACTTGGATGAAACGGTGCAGGCCAGGCGGGCCCTAATAAAACCCTCTGCCAGGTCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
3UTR GCA 72 bp ACAGCACCTGGTGGCCACACCCTGAAATGCACCCTTTaGTCCAAGCAGCCAGCGCCCTATCAACCTGGCATT +
Preference number: 3 (lower is better)
Translates to: TAPGGHTLKCTL*SKQPAPYQPGI
Trigger: AATGCCAGGTTGATAGGGCGCTGGCTGCTTGGAGCAAAGGGTGCATTTCAGGGTGTGGCCACCAGGTGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275517.8
3UTR GCA 72 bp CAAGGACACCTAGGCTTCCCCAGCAGGGGGCTTGCTTaGAGGTCTGACAAACCACAGAGCGTTGAGCAGATG +
Preference number: 3 (lower is better)
Translates to: QGHLGFPSRGLA*RSDKPQSVEQM
Trigger: CATCTGCTCAACGCTCTGTGGTTTGTCAGACCTGCAAGCAAGCCCCCTGCTGGGGAAGCCTAGGTGTCCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275517.8
3UTR CCA 72 bp GACAGGACGACAAGAGACAGGACACCAGTGAGTGGCTaGGCCAGGCGGCCCCATTTCCTAAAACCAAGATGG +
Preference number: 3 (lower is better)
Translates to: DRTTRDRTPVSG*ARRPHFLKPRW
Trigger: CCATCTTGGTTTTAGGAAATGGGGCCGCCTGGCCCAGCCACTCACTGGTGTCCTGTCTCTTGTCGTCCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
3UTR TCA 72 bp CTCAACCCTCAGCCCTTTAACTTCTGGCTGGGCCACTaGTTCTCCTCCCCAGTCTGTGGCCCATCTGGAAAC +
Preference number: 3 (lower is better)
Translates to: LNPQPFNFWLGH*FSSPVCGPSGN
Trigger: GTTTCCAGATGGGCCACAGACTGGGGAGGAGAATCAGTGGCCCAGCCAGAAGTTAAAGGGCTGAGGGTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
3UTR GCA 72 bp CAGAAACTCACAGCACCTGGTGGCCACACCCTGAAATaGACCCTTTGCTCCAAGCAGCCAGCGCCCTATCAA +
Preference number: 3 (lower is better)
Translates to: QKLTAPGGHTLK*TLCSKQPAPYQ
Trigger: TTGATAGGGCGCTGGCTGCTTGGAGCAAAGGGTGCATTTCAGGGTGTGGCCACCAGGTGCTGTGAGTTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275517.8
3UTR GCA 72 bp CTGCTGCATCAGCCAGTGAGGACAAGAGTTCTTCAGTaGGGTTCAGCTCAAGGACACCTAGGCTTCCCCAGC +
Preference number: 3 (lower is better)
Translates to: LLHQPVRTRVLQ*GSAQGHLGFPS
Trigger: GCTGGGGAAGCCTAGGTGTCCTTGAGCTGAACCGCACTGAAGAACTCTTGTCCTCACTGGCTGATGCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
3UTR TCA 72 bp CTCCAAGAAAAAGGAAATCCTAGGGCTCCTGCGAGGTaGTTGGACAGCTGGGACCTCTACAGCATGGGCCAC +
Preference number: 3 (lower is better)
Translates to: LQEKGNPRAPAR*LDSWDLYSMGH
Trigger: GTGGCCCATGCTGTAGAGGTCCCAGCTGTCCAATCACCTCGCAGGAGCCCTAGGATTTCCTTTTTCTTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527430.1
3UTR CCA 72 bp AGGTCTGACAAACCACAGAGCGTTGAGCAGATGGCCTaGGACTCCCAGACCTGGCAGAGGGTTTTATTAGGG +
Preference number: 3 (lower is better)
Translates to: RSDKPQSVEQMA*DSQTWQRVLLG
Trigger: CCCTAATAAAACCCTCTGCCAGGTCTGGGAGTCCCAGGCCATCTGCTCAACGCTCTGTGGTTTGTCAGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
3UTR CCA 72 bp TCCTCCCCAGTCTGTGGCCCATCTGGAAACTGGCTATaGTACTTTGGGGAGATAGGAAGGACAGGACGACAA +
Preference number: 3 (lower is better)
Translates to: SSPVCGPSGNWL*YFGEIGRTGRQ
Trigger: TTGTCGTCCTGTCCTTCCTATCTCCCCAAAGTACCATAGCCAGTTTCCAGATGGGCCACAGACTGGGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
3UTR CCA 72 bp AAGAAAAAGGAAATCCTAGGGCTCCTGCGAGGTGATTaGACAGCTGGGACCTCTACAGCATGGGCCACGATC +
Preference number: 3 (lower is better)
Translates to: KKKEILGLLRGD*TAGTSTAWATI
Trigger: GATCGTGGCCCATGCTGTAGAGGTCCCAGCTGTCCAATCACCTCGCAGGAGCCCTAGGATTTCCTTTTTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527430.1
3UTR CCA 72 bp GATCAAACTGCTCAGCAGCTTCAAACTCGGCATTCATaGCCGCAGCCCACTCATCCAGCTCCGTTTTCAAGA +
Preference number: 3 (lower is better)
Translates to: DQTAQQLQTRHS*PQPTHPAPFSR
Trigger: TCTTGAAAACGGAGCTGGATGAGTGGGCTGCGGCCATGAATGCCGAGTTTGAAGCTGCTGAGCAGTTTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524733.5
3UTR TCA 72 bp GAGTCGGGGGCAGGGCAGCCTTCAAATCCACACTATTaGATCCACACGATGGAAAGAAGAGAAAGATGGGGA +
Preference number: 3 (lower is better)
Translates to: ESGAGQPSNPHY*IHTMERRERWG
Trigger: TCCCCATCTTTCTCTTCTTTCCATCGTGTGGATTCAATAGTGTGGATTTGAAGGCTGCCCTGCCCCCGACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275517.8
3UTR CCA 72 bp CATTTTCTTCTTCTTACGTTTCTGTTTCTCGGGTGGTaGGGAGATTCCAGGGAGAGTCATGTCTGGGGCCCA +
Preference number: 3 (lower is better)
Translates to: HFLLLTFLFLGW*GDSRESHVWGP
Trigger: TGGGCCCCAGACATGACTCTCCCTGGAATCTCCCCACCACCCGAGAAACAGAAACGTAAGAAGAAGAAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527430.1
3UTR GCA 72 bp TCTTCCCTGGCATTCTCTGTTATCCACCAGCTCCTCTaGACACCTCAGCGTCTACTTCCACGAACTTCTAAA +
Preference number: 3 (lower is better)
Translates to: SSLAFSVIHQLL*TPQRLLPRTSK
Trigger: TTTAGAAGTTCGTGGAAGTAGACGCTGAGGTGTGCAGAGGAGCTGGTGGATAACAGAGAATGCCAGGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275517.8
3UTR CCA 72 bp GGGAAACCCACGGAACTGAAAACCTCTTTACACAGGTaGGTTCAAGAAGAAAGCCACCAACAGAAGGCAACT +
Preference number: 3 (lower is better)
Translates to: GKPTELKTSLHR*VQEESHQQKAT
Trigger: AGTTGCCTTCTGTTGGTGGCTTTCTTCTTGAACCCACCTGTGTAAAGAGGTTTTCAGTTCCGTGGGTTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
3UTR GCA 72 bp AGAGAAAGATGGGGAAATTCTCCAGAGATCATGAGATaGATCCAGGCAGTGTTCTCATGTGAGAGGATAGGG +
Preference number: 3 (lower is better)
Translates to: RERWGNSPEIMR*IQAVFSCERIG
Trigger: CCCTATCCTCTCACATGAGAACACTGCCTGGATGCATCTCATGATCTCTGGAGAATTTCCCCATCTTTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
3UTR GCA 72 bp CGCGAGGAAACTTTCCGAGGACTTTACAAGCATAGTTaGAAAATGCTAGTAGGTCTGGGACTCTTCAACTTT +
Preference number: 3 (lower is better)
Translates to: REETFRGLYKHS*KMLVGLGLFNF
Trigger: AAAGTTGAAGAGTCCCAGACCTACTAGCATTTTGCAACTATGCTTGTAAAGTCCTCGGAAAGTTTCCTCGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
3UTR TCA 72 bp AATGATGATCTCAACTCTGCATCATCTGGTGACTCCTaGTTCTGCAGGACTAAGACATTTCCCAAGAGTTCT +
Preference number: 3 (lower is better)
Translates to: NDDLNSASSGDS*FCRTKTFPKSS
Trigger: AGAACTCTTGGGAAATGTCTTAGTCCTGCAGAATCAGGAGTCACCAGATGATGCAGAGTTGAGATCATCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275517.8
3UTR TCA 72 bp GACTATTTACAGAATCAAAGGGGAAACCCACGGAACTaGAAACCTCTTTACACAGGTGGGTTCAAGAAGAAA +
Preference number: 3 (lower is better)
Translates to: DYLQNQRGNPRN*KPLYTGGFKKK
Trigger: TTTCTTCTTGAACCCACCTGTGTAAAGAGGTTTTCAGTTCCGTGGGTTTCCCCTTTGATTCTGTAAATAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR TCA 90 bp GGGCCCGCCTGGCCTGCACCGTTTCATCCAAGTACCCTGACCCAGCACTCATCTCTTGGCCCGGAGCGCTaGGCGGCTCCTCCGGACCGC +
Preference number: 4 (lower is better)
Translates to: GPAWPAPFHPSTLTQHSSLGPER*AAPPDR
Trigger: GCGGTCCGGAGGAGCCGCTCAGCGCTCCGGGCCAAG...AGATGAGTGCTGGGTCAGGGTACTTGGATGAAACGGTGCAGGCCAGGCGGGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR CCA 90 bp AAGTCTTCTGCCCCCAGCAGCCCCTCGAAGCCAAAGCAGGACCGGCGGCCTGGGGCAGGACCGGCGGCCTaGGGTGGAGGTAGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: KSSAPSSPSKPKQDRRPGAGPAA*GGGRGR
Trigger: TCTGCCTCTACCTCCACCCCAGGCCGCCGGTCCTGC...CCCAGGCCGCCGGTCCTGCTTTGGCTTCGAGGGGCTGCTGGGGGCAGAAGACTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000527430.1
CDS-3UTR CCA 90 bp AAGTCTTCTGCCCCCAGCAGCCCCTCGAAGCCAAAGCAGGACCGGCGGCCTGGGGCACAGGAGTGCTGGTaGGGGTGGCAGGGACGCTGT +
Preference number: 4 (lower is better)
Translates to: KSSAPSSPSKPKQDRRPGAQECW*GWQGRC
Trigger: ACAGCGTCCCTGCCACCCCCACCAGCACTCCTGTGC...CCCAGGCCGCCGGTCCTGCTTTGGCTTCGAGGGGCTGCTGGGGGCAGAAGACTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000527430.1
CDS-3UTR CCA 90 bp GCAGCCACCCCTCCCAACAAGAGCAGAGGTGCCTCTCACCTCAACCCTCAGCCCGCAGGACCGGCGGCCTaGGGTGGAGGTAGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: AATPPNKSRGASHLNPQPAGPAA*GGGRGR
Trigger: TCTGCCTCTACCTCCACCCCAGGCCGCCGGTCCTGC...GGGCTGAGGGTTGAGGTGAGAGGCACCTCTGCTCTTGTTGGGAGGGGTGGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR GCA 90 bp CGAGGCTGGCAGAGCCCCTGGGCCTATTTCCAAGCAGCCACCCCTCCCAACAAGTACAATGGCCAGGGGTaGGGCAGGAGAGTCGGGGGC +
Preference number: 4 (lower is better)
Translates to: RGWQSPWAYFQAATPPNKYNGQG*GRRVGG
Trigger: GCCCCCGACTCTCCTGCCGCACCCCTGGCCATTGTA...CTTGTTGGGAGGGGTGGCTGCTTGGAAATAGGCCCAGGGGCTCTGCCAGCCTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR TCA 90 bp GCTCTCCTTCCTTGGAGCTGGACTCGGCCTCAGGGTTCGGCACAGGAGTGCTGGAGGGCTCCTGCGAGGTaGTTGGACAGCTGGGACCTC +
Preference number: 4 (lower is better)
Translates to: ALLPWSWTRPQGSAQECWRAPAR*LDSWDL
Trigger: GAGGTCCCAGCTGTCCAATCACCTCGCAGGAGCCCT...CCAGCACTCCTGTGCCGAACCCTGAGGCCGAGTCCAGCTCCAAGGAAGGAGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527430.1
CDS-3UTR GCA 90 bp GCCGAGGCTGGCAGAGCCCCTGGGCCTATTTCCAAGCAGCCACCCCTCCCAACACAAGATGGCTGCCGCTaGTGCCCAAGCCCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: AEAGRAPGPISKQPPLPTQDGCR*CPSPQR
Trigger: CCTTTGAGGGCTTGGGCAGCAGCGGCAGCCATCTTG...TGTTGGGAGGGGTGGCTGCTTGGAAATAGGCCCAGGGGCTCTGCCAGCCTCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
CDS-3UTR CCA 90 bp CGAGGCTGGCAGAGCCCCTGGGCCTATTTCCAAGCAGCCACCCCTCCCAACAAGACACCAGTGAGTGGCTaGGCCAGGCGGCCCCATTTC +
Preference number: 4 (lower is better)
Translates to: RGWQSPWAYFQAATPPNKTPVSG*ARRPHF
Trigger: GAAATGGGGCCGCCTGGCCCAGCCACTCACTGGTGT...CTTGTTGGGAGGGGTGGCTGCTTGGAAATAGGCCCAGGGGCTCTGCCAGCCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
CDS-3UTR CCA 90 bp ACAAACCACAGAGCGTTGAGCAGATGGCCTGGGACTCCCAGACCTGGCAGAGGGGGGAGAGGCCGAGGCTaGCAGAGCCCCTGGGCCTAT +
Preference number: 4 (lower is better)
Translates to: TNHRALSRWPGTPRPGRGGRGRG*QSPWAY
Trigger: ATAGGCCCAGGGGCTCTGCCAGCCTCGGCCTCTCCC...CCCTCTGCCAGGTCTGGGAGTCCCAGGCCATCTGCTCAACGCTCTGTGGTTTGT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR TCA 90 bp GCTGGCAGAGCCCCTGGGCCTATTTCCAAGCAGCCACCCCTCCCAACAAGAGCACCCTGGGGACCTCGGTaGGTTTGGAGCACACCACTG +
Preference number: 4 (lower is better)
Translates to: AGRAPGPISKQPPLPTRAPWGPR*VWSTPL
Trigger: CAGTGGTGTGCTCCAAACTCACCGAGGTCCCCAGGG...TGCTCTTGTTGGGAGGGGTGGCTGCTTGGAAATAGGCCCAGGGGCTCTGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
CDS-3UTR TCA 90 bp GTCCAGCTCTCCTTCCTTGGAGCTGGACTCGGCCTCAGGGTTCGGCACAGGAGTAGACGATGGGCTTTCTaGCTGCAGCCGCACTGGGTG +
Preference number: 4 (lower is better)
Translates to: VQLSFLGAGLGLRVRHRSRRWAF*LQPHWV
Trigger: CACCCAGTGCGGCTGCAGTCAGAAAGCCCATCGTCT...ACTCCTGTGCCGAACCCTGAGGCCGAGTCCAGCTCCAAGGAAGGAGAGCTGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527430.1
CDS-3UTR GCA 90 bp AGAGCCCCTGGGCCTATTTCCAAGCAGCCACCCCTCCCAACAAGAGCAGAGGTGTGGGGCCCAGGGCTTTaGACAAACCCTGGGGACCTC +
Preference number: 4 (lower is better)
Translates to: RAPGPISKQPPLPTRAEVWGPGL*TNPGDL
Trigger: GAGGTCCCCAGGGTTTGTGCAAAGCCCTGGGCCCCA...CACCTCTGCTCTTGTTGGGAGGGGTGGCTGCTTGGAAATAGGCCCAGGGGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
CDS-3UTR GCA 90 bp ACAAACCACAGAGCGTTGAGCAGATGGCCTGGGACTCCCAGACCTGGCAGAGGGGATGGCTGCCGCTGCTaGCCAAGCCCTCAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: TNHRALSRWPGTPRPGRGDGCRC*PSPQRQ
Trigger: CTGCCTTTGAGGGCTTGGGCAGCAGCGGCAGCCATC...CCCTCTGCCAGGTCTGGGAGTCCCAGGCCATCTGCTCAACGCTCTGTGGTTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR CCA 90 bp GGGCCTATTTCCAAGCAGCCACCCCTCCCAACAAGAGCAGAGGTGCCTCTCACCAGGCTTAGTAGGAGATaGGGCCCTTGGCCCGGAGCG +
Preference number: 4 (lower is better)
Translates to: GPISKQPPLPTRAEVPLTRLSRR*GPWPGA
Trigger: CGCTCCGGGCCAAGGGCCCCATCTCCTACTAAGCCT...GGTGAGAGGCACCTCTGCTCTTGTTGGGAGGGGTGGCTGCTTGGAAATAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR CCA 90 bp GTCCAGCTCTCCTTCCTTGGAGCTGGACTCGGCCTCAGGGTTCGGCACAGGAGTCTCCTTCCTTGGAGCTaGACTCGGCCTCAGGGTTCG +
Preference number: 4 (lower is better)
Translates to: VQLSFLGAGLGLRVRHRSLLPWS*TRPQGS
Trigger: CGAACCCTGAGGCCGAGTCCAGCTCCAAGGAAGGAG...ACTCCTGTGCCGAACCCTGAGGCCGAGTCCAGCTCCAAGGAAGGAGAGCTGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527430.1
CDS-3UTR CCA 90 bp GCCGAGGCTGGCAGAGCCCCTGGGCCTATTTCCAAGCAGCCACCCCTCCCAACACTGTTTCTCGGGTGGTaGGGAGATTCCAGGGAGAGT +
Preference number: 4 (lower is better)
Translates to: AEAGRAPGPISKQPPLPTLFLGW*GDSRES
Trigger: ACTCTCCCTGGAATCTCCCCACCACCCGAGAAACAG...TGTTGGGAGGGGTGGCTGCTTGGAAATAGGCCCAGGGGCTCTGCCAGCCTCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
CDS-3UTR CCA 90 bp CAGCCACCCCTCCCAACAAGAGCAGAGGTGCCTCTCACCTCAACCCTCAGCCCTGTTGAGCAGATGGCCTaGGACTCCCAGACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: QPPLPTRAEVPLTSTLSPVEQMA*DSQTWQ
Trigger: CTGCCAGGTCTGGGAGTCCCAGGCCATCTGCTCAAC...AGGGCTGAGGGTTGAGGTGAGAGGCACCTCTGCTCTTGTTGGGAGGGGTGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR GCA 90 bp GGGCCTATTTCCAAGCAGCCACCCCTCCCAACAAGAGCAGAGGTGCCTCTCACCTCCGGACAAGTCTTCTaGCCCCAGCAGCCCCTCGAA +
Preference number: 4 (lower is better)
Translates to: GPISKQPPLPTRAEVPLTSGQVF*PQQPLE
Trigger: TTCGAGGGGCTGCTGGGGGCAGAAGACTTGTCCGGA...GGTGAGAGGCACCTCTGCTCTTGTTGGGAGGGGTGGCTGCTTGGAAATAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
CDS-3UTR GCA 90 bp CCTGGGCCTATTTCCAAGCAGCCACCCCTCCCAACAAGAGCAGAGGTGCCTCTCTCCGGACAAGTCTTCTaGCCCCAGCAGCCCCTCGAA +
Preference number: 4 (lower is better)
Translates to: PGPISKQPPLPTRAEVPLSGQVF*PQQPLE
Trigger: TTCGAGGGGCTGCTGGGGGCAGAAGACTTGTCCGGA...GAGAGGCACCTCTGCTCTTGTTGGGAGGGGTGGCTGCTTGGAAATAGGCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
CDS-3UTR GCA 90 bp CAGCCACCCCTCCCAACAAGAGCAGAGGTGCCTCTCACCTCAACCCTCAGCCCTGGCAGACAGTCCTCATaGGCAGCACCAGCACACACA +
Preference number: 4 (lower is better)
Translates to: QPPLPTRAEVPLTSTLSPGRQSS*AAPAHT
Trigger: TGTGTGTGCTGGTGCTGCGCATGAGGACTGTCTGCC...AGGGCTGAGGGTTGAGGTGAGAGGCACCTCTGCTCTTGTTGGGAGGGGTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
CDS-3UTR CCA 90 bp GTGCGGTTCAGCTCAAGGACACCTAGGCTTCCCCAGCAGGGGGCTTGCTTGCAGGAGCCTGATTTCCGCTaGGACCTCCGCAGAGGCTTA +
Preference number: 4 (lower is better)
Translates to: VRFSSRTPRLPQQGACLQEPDFR*DLRRGL
Trigger: TAAGCCTCTGCGGAGGTCCCAGCGGAAATCAGGCTC...CTGCAAGCAAGCCCCCTGCTGGGGAAGCCTAGGTGTCCTTGAGCTGAACCGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR CCA 90 bp TCCAGCTCTCCTTCCTTGGAGCTGGACTCGGCCTCAGGGTTCGGCACAGGAGTGGAGCCTGATTTCCGCTaGGACCTCCGCAGAGGCTTA +
Preference number: 4 (lower is better)
Translates to: SSSPSLELDSASGFGTGVEPDFR*DLRRGL
Trigger: TAAGCCTCTGCGGAGGTCCCAGCGGAAATCAGGCTC...CACTCCTGTGCCGAACCCTGAGGCCGAGTCCAGCTCCAAGGAAGGAGAGCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527430.1
CDS-3UTR CCA 90 bp GAGCCACAGAAACTCACAGCACCTGGTGGCCACACCCTGAAATGCACCCTTTGCGCACAGGAGTGCTGGTaGGGGTGGCAGGGACGCTGT +
Preference number: 4 (lower is better)
Translates to: EPQKLTAPGGHTLKCTLCAQECW*GWQGRC
Trigger: ACAGCGTCCCTGCCACCCCCACCAGCACTCCTGTGC...GCAAAGGGTGCATTTCAGGGTGTGGCCACCAGGTGCTGTGAGTTTCTGTGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR CCA 90 bp CGAGGCTGGCAGAGCCCCTGGGCCTATTTCCAAGCAGCCACCCCTCCCAACAAGCAAACTCGGCATTCATaGCCGCAGCCCACTCATCCA +
Preference number: 4 (lower is better)
Translates to: RGWQSPWAYFQAATPPNKQTRHS*PQPTHP
Trigger: TGGATGAGTGGGCTGCGGCCATGAATGCCGAGTTTG...CTTGTTGGGAGGGGTGGCTGCTTGGAAATAGGCCCAGGGGCTCTGCCAGCCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
CDS-3UTR CCA 90 bp GACCTGGCAGAGGGTTTTATTAGGGCCCGCCTGGCCTGCACCGTTTCATCCAAGGGCTGGCAGAGCCCCTaGGCCTATTTCCAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: DLAEGFIRARLACTVSSKGWQSP*AYFQAA
Trigger: GGCTGCTTGGAAATAGGCCCAGGGGCTCTGCCAGCC...CTTGGATGAAACGGTGCAGGCCAGGCGGGCCCTAATAAAACCCTCTGCCAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR CCA 90 bp GCTTCAAACTCGGCATTCATGGCCGCAGCCCACTCATCCAGCTCCGTTTTCAAGGGGAGAGGCCGAGGCTaGCAGAGCCCCTGGGCCTAT +
Preference number: 4 (lower is better)
Translates to: ASNSAFMAAAHSSSSVFKGRGRG*QSPWAY
Trigger: ATAGGCCCAGGGGCTCTGCCAGCCTCGGCCTCTCCC...CTTGAAAACGGAGCTGGATGAGTGGGCTGCGGCCATGAATGCCGAGTTTGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524733.5
3UTR CAA 72 bp GGGGGCTTGCTTGCAGGTCTGACAAACCACAGAGCGTaGAGCAGATGGCCTGGGACTCCCAGACCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: GGLLAGLTNHRA*SRWPGTPRPGR
Trigger: TCTGCCAGGTCTGGGAGTCCCAGGCCATCTGCTCAACGCTCTGTGGTTTGTCAGACCTGCAAGCAAGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR TCA 90 bp GGTGGCAGGGACGCTGTGTGTCTTGAAAAGGTCCTCCTTAGTAAGCTCCCTGCCCGGGAGTTCAGAGCCTaGTTTCCGCTGGGACCTCCG +
Preference number: 4 (lower is better)
Translates to: GGRDAVCLEKVLLSKLPAREFRA*FPLGPP
Trigger: CGGAGGTCCCAGCGGAAATCAGGCTCTGAACTCCCG...GGCAGGGAGCTTACTAAGGAGGACCTTTTCAAGACACACAGCGTCCCTGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527430.1
CDS-3UTR TCA 90 bp CGAGGCTGGCAGAGCCCCTGGGCCTATTTCCAAGCAGCCACCCCTCCCAACAAGGGCAGTGTTCTCATGTaGGAGGATAGGGAGGCCAAA +
Preference number: 4 (lower is better)
Translates to: RGWQSPWAYFQAATPPNKGSVLM*EDREAK
Trigger: TTTGGCCTCCCTATCCTCTCACATGAGAACACTGCC...CTTGTTGGGAGGGGTGGCTGCTTGGAAATAGGCCCAGGGGCTCTGCCAGCCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR CCA 90 bp CCACAGAGCGTTGAGCAGATGGCCTGGGACTCCCAGACCTGGCAGAGGGTTTTACTCCTTCCTTGGAGCTaGACTCGGCCTCAGGGTTCG +
Preference number: 4 (lower is better)
Translates to: PQSVEQMAWDSQTWQRVLLLPWS*TRPQGS
Trigger: CGAACCCTGAGGCCGAGTCCAGCTCCAAGGAAGGAG...TAAAACCCTCTGCCAGGTCTGGGAGTCCCAGGCCATCTGCTCAACGCTCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR CCA 90 bp CAGCCACCCCTCCCAACAAGAGCAGAGGTGCCTCTCACCTCAACCCTCAGCCCTTTTGGAGCACACCACTaGCGAGACTCCGGACAAGTC +
Preference number: 4 (lower is better)
Translates to: QPPLPTRAEVPLTSTLSPFGAHH*RDSGQV
Trigger: GACTTGTCCGGAGTCTCGCCAGTGGTGTGCTCCAAA...AGGGCTGAGGGTTGAGGTGAGAGGCACCTCTGCTCTTGTTGGGAGGGGTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
CDS-3UTR CCA 90 bp GCAGCCACCCCTCCCAACAAGAGCAGAGGTGCCTCTCACCTCAACCCTCAGCCCCCTTTAACTTCTGGCTaGGCCACTGATTCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: AATPPNKSRGASHLNPQPPLTSG*ATDSPP
Trigger: GGGAGGAGAATCAGTGGCCCAGCCAGAAGTTAAAGG...GGGCTGAGGGTTGAGGTGAGAGGCACCTCTGCTCTTGTTGGGAGGGGTGGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
3UTR CAA 72 bp CAGGGCTTTGCACAAACCCTGGGGACCTCGGTGAGTTaGGAGCACACCACTGGCGAGACTCCGGACAAGTCT +
Preference number: 4 (lower is better)
Translates to: QGFAQTLGTSVS*EHTTGETPDKS
Trigger: AGACTTGTCCGGAGTCTCGCCAGTGGTGTGCTCCAAACTCACCGAGGTCCCCAGGGTTTGTGCAAAGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527430.1
CDS-3UTR TCA 90 bp CAGGTGGGTTCAAGAAGAAAGCCACCAACAGAAGGCAACTCAGGAGGGAGAGGCCCCTGGGGACCTCGGTaGGTTTGGAGCACACCACTG +
Preference number: 4 (lower is better)
Translates to: QVGSRRKPPTEGNSGGRGPWGPR*VWSTPL
Trigger: CAGTGGTGTGCTCCAAACTCACCGAGGTCCCCAGGG...GCCTCTCCCTCCTGAGTTGCCTTCTGTTGGTGGCTTTCTTCTTGAACCCACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
CDS-3UTR TCA 90 bp CTGGGCCTATTTCCAAGCAGCCACCCCTCCCAACAAGAGCAGAGGTGCCTCTCACTGGTGGCCACACCCTaGAATGCACCCTTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: LGLFPSSHPSQQEQRCLSLVATP*NAPFAP
Trigger: TGGAGCAAAGGGTGCATTTCAGGGTGTGGCCACCAG...TGAGAGGCACCTCTGCTCTTGTTGGGAGGGGTGGCTGCTTGGAAATAGGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR TCA 90 bp CCTGGGCCTATTTCCAAGCAGCCACCCCTCCCAACAAGAGCAGAGGTGCCTCTCAGAAATGGGTATGGGTaGCAAGAGGGGCCACCTTCC +
Preference number: 4 (lower is better)
Translates to: PGPISKQPPLPTRAEVPLRNGYG*QEGPPS
Trigger: GGAAGGTGGCCCCTCTTGTCACCCATACCCATTTCT...GAGAGGCACCTCTGCTCTTGTTGGGAGGGGTGGCTGCTTGGAAATAGGCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR GCA 90 bp ACAAACCACAGAGCGTTGAGCAGATGGCCTGGGACTCCCAGACCTGGCAGAGGGGATGGGCTTTCTGACTaGAGCCGCACTGGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: TNHRALSRWPGTPRPGRGDGLSD*SRTGCL
Trigger: AAGACACCCAGTGCGGCTGCAGTCAGAAAGCCCATC...CCCTCTGCCAGGTCTGGGAGTCCCAGGCCATCTGCTCAACGCTCTGTGGTTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR CCA 90 bp AAGAAATGGGTATGGGTGACAAGAGGGGCCACCTTCCACCCCTGCAGCAGAGTGCCAGCTCTCCTTCCTTaGAGCTGGACTCGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: KKWVWVTRGATFHPCSRVPALLP*SWTRPQ
Trigger: CTGAGGCCGAGTCCAGCTCCAAGGAAGGAGAGCTGG...CACTCTGCTGCAGGGGTGGAAGGTGGCCCCTCTTGTCACCCATACCCATTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR CCA 90 bp GGGACGCTGTGTGTCTTGAAAAGGTCCTCCTTAGTAAGCTCCCTGCCAGGGGGCAGGGAGAGTCATGTCTaGGGCCCAGGGCTTTGCACA +
Preference number: 4 (lower is better)
Translates to: GTLCVLKRSSLVSSLPGGRESHV*GPGLCT
Trigger: TGTGCAAAGCCCTGGGCCCCAGACATGACTCTCCCT...GCCCCCTGGCAGGGAGCTTACTAAGGAGGACCTTTTCAAGACACACAGCGTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527430.1
CDS-3UTR CCA 90 bp CAGCCACCCCTCCCAACAAGAGCAGAGGTGCCTCTCACCTCAACCCTCAGCCCTTTTCTGTTTCTCGGGTaGTGGGGAGATTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: QPPLPTRAEVPLTSTLSPFLFLG*WGDSRE
Trigger: CTCCCTGGAATCTCCCCACCACCCGAGAAACAGAAA...AGGGCTGAGGGTTGAGGTGAGAGGCACCTCTGCTCTTGTTGGGAGGGGTGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
CDS-3UTR CCA 90 bp TCCAGCTCTCCTTCCTTGGAGCTGGACTCGGCCTCAGGGTTCGGCACAGGAGTGTTTCTGTTTCTCGGGTaGTGGGGAGATTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SSSPSLELDSASGFGTGVFLFLG*WGDSRE
Trigger: CTCCCTGGAATCTCCCCACCACCCGAGAAACAGAAA...CACTCCTGTGCCGAACCCTGAGGCCGAGTCCAGCTCCAAGGAAGGAGAGCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527430.1
CDS-3UTR CCA 90 bp CCAAGCAGCCACCCCTCCCAACAAGAGCAGAGGTGCCTCTCACCTCAACCCTCACTCTCCACAGGGAGGTaGCTATGTACAGGACAGGAG +
Preference number: 4 (lower is better)
Translates to: PSSHPSQQEQRCLSPQPSLSTGR*LCTGQE
Trigger: CTCCTGTCCTGTACATAGCCACCTCCCTGTGGAGAG...TGAGGGTTGAGGTGAGAGGCACCTCTGCTCTTGTTGGGAGGGGTGGCTGCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
CDS-3UTR CCA 90 bp TATTTCCAAGCAGCCACCCCTCCCAACAAGAGCAGAGGTGCCTCTCACCTCAACACACCAGTGAGTGGCTaGGCCAGGCGGCCCCATTTC +
Preference number: 4 (lower is better)
Translates to: YFQAATPPNKSRGASHLNTPVSG*ARRPHF
Trigger: GAAATGGGGCCGCCTGGCCCAGCCACTCACTGGTGT...GTTGAGGTGAGAGGCACCTCTGCTCTTGTTGGGAGGGGTGGCTGCTTGGAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
CDS-3UTR CCA 90 bp AGCAGCCACCCCTCCCAACAAGAGCAGAGGTGCCTCTCACCTCAACCCTCAGCCCCTTTAACTTCTGGCTaGGCCACTGATTCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: SSHPSQQEQRCLSPQPSAPLTSG*ATDSPP
Trigger: GGGAGGAGAATCAGTGGCCCAGCCAGAAGTTAAAGG...GGCTGAGGGTTGAGGTGAGAGGCACCTCTGCTCTTGTTGGGAGGGGTGGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
CDS-3UTR CCA 90 bp CCTGGGCCTATTTCCAAGCAGCCACCCCTCCCAACAAGAGCAGAGGTGCCTCTCTTATTAGGGCCCGCCTaGCCTGCACCGTTTCATCCA +
Preference number: 4 (lower is better)
Translates to: PGPISKQPPLPTRAEVPLLLGPA*PAPFHP
Trigger: TGGATGAAACGGTGCAGGCCAGGCGGGCCCTAATAA...GAGAGGCACCTCTGCTCTTGTTGGGAGGGGTGGCTGCTTGGAAATAGGCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR TCA 90 bp CACAGGTGGGTTCAAGAAGAAAGCCACCAACAGAAGGCAACTCAGGAGGGAGAGCGGGAGTTCAGAGCCTaGTTTCCGCTGGGACCTCCG +
Preference number: 4 (lower is better)
Translates to: HRWVQEESHQQKATQEGEREFRA*FPLGPP
Trigger: CGGAGGTCCCAGCGGAAATCAGGCTCTGAACTCCCG...CTCTCCCTCCTGAGTTGCCTTCTGTTGGTGGCTTTCTTCTTGAACCCACCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR TCA 90 bp CCCAGTCTGTGGCCCATCTGGAAACTGGCTATGGTACTTTGGGGAGATAGGAAGAGGGCTCCTGCGAGGTaGTTGGACAGCTGGGACCTC +
Preference number: 4 (lower is better)
Translates to: PSLWPIWKLAMVLWGDRKRAPAR*LDSWDL
Trigger: GAGGTCCCAGCTGTCCAATCACCTCGCAGGAGCCCT...CTTCCTATCTCCCCAAAGTACCATAGCCAGTTTCCAGATGGGCCACAGACTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
CDS-3UTR TCA 90 bp AGCAGCCACCCCTCCCAACAAGAGCAGAGGTGCCTCTCACCTCAACCCTCAGCCTACACACTTATGGTCTaGGACCCAACTAAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: SSHPSQQEQRCLSPQPSAYTLMV*DPTKAP
Trigger: GGGAGCCTTAGTTGGGTCTCAGACCATAAGTGTGTA...GGCTGAGGGTTGAGGTGAGAGGCACCTCTGCTCTTGTTGGGAGGGGTGGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR GCA 90 bp GGCAGAGCCCAGGGTCTCCAGCCGGCTGTAGGAACGCCTGACTTTCTTAGACATGATGGGCTTTCTGACTaGAGCCGCACTGGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: GRAQGLQPAVGTPDFLRHDGLSD*SRTGCL
Trigger: AAGACACCCAGTGCGGCTGCAGTCAGAAAGCCCATC...ATGTCTAAGAAAGTCAGGCGTTCCTACAGCCGGCTGGAGACCCTGGGCTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527430.1
CDS-3UTR GCA 90 bp GCATTCATGGCCGCAGCCCACTCATCCAGCTCCGTTTTCAAGATCTCTGGCATTGATGGCTGCCGCTGCTaGCCAAGCCCTCAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: AFMAAAHSSSSVFKISGIDGCRC*PSPQRQ
Trigger: CTGCCTTTGAGGGCTTGGGCAGCAGCGGCAGCCATC...AATGCCAGAGATCTTGAAAACGGAGCTGGATGAGTGGGCTGCGGCCATGAATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524733.5
CDS-3UTR GCA 90 bp GACAAGAGTTCTTCAGTGCGGTTCAGCTCAAGGACACCTAGGCTTCCCCAGCAGCAAGATGGCTGCCGCTaGTGCCCAAGCCCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: DKSSSVRFSSRTPRLPQQQDGCR*CPSPQR
Trigger: CCTTTGAGGGCTTGGGCAGCAGCGGCAGCCATCTTG...CTGCTGGGGAAGCCTAGGTGTCCTTGAGCTGAACCGCACTGAAGAACTCTTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR GCA 90 bp CACACCCTGAAATGCACCCTTTGCTCCAAGCAGCCAGCGCCCTATCAACCTGGCGGCCACACCCTGAAATaGACCCTTTGCTCCAAGCAG +
Preference number: 4 (lower is better)
Translates to: HTLKCTLCSKQPAPYQPGGHTLK*TLCSKQ
Trigger: CTGCTTGGAGCAAAGGGTGCATTTCAGGGTGTGGCC...GCCAGGTTGATAGGGCGCTGGCTGCTTGGAGCAAAGGGTGCATTTCAGGGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR GCA 90 bp AAATTGCTATCAGCCCCCGCCGCTGTCTGGTACGCGAGGAAACTTTCCGAGGACGCCACCTTCCACCCCTaGAGCAGAGTGGTAAGACTC +
Preference number: 4 (lower is better)
Translates to: KLLSAPAAVWYARKLSEDATFHP*SRVVRL
Trigger: GAGTCTTACCACTCTGCTGCAGGGGTGGAAGGTGGC...GTCCTCGGAAAGTTTCCTCGCGTACCAGACAGCGGCGGGGGCTGATAGCAATTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR GCA 90 bp GGGCCTATTTCCAAGCAGCCACCCCTCCCAACAAGAGCAGAGGTGCCTCTCACCATCCACCAGCTCCTCTaGACACCTCAGCGTCTACTT +
Preference number: 4 (lower is better)
Translates to: GPISKQPPLPTRAEVPLTIHQLL*TPQRLL
Trigger: AAGTAGACGCTGAGGTGTGCAGAGGAGCTGGTGGAT...GGTGAGAGGCACCTCTGCTCTTGTTGGGAGGGGTGGCTGCTTGGAAATAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR GCA 90 bp CCTCCCAACAAGAGCAGAGGTGCCTCTCACCTCAACCCTCAGCCCTTTAACTTCAGGGCCCGCCTGGCCTaGACCGTTTCATCCAAGTAC +
Preference number: 4 (lower is better)
Translates to: PPNKSRGASHLNPQPFNFRARLA*TVSSKY
Trigger: GTACTTGGATGAAACGGTGCAGGCCAGGCGGGCCCT...GAAGTTAAAGGGCTGAGGGTTGAGGTGAGAGGCACCTCTGCTCTTGTTGGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR CCA 90 bp GGGACGCTGTGTGTCTTGAAAAGGTCCTCCTTAGTAAGCTCCCTGCCAGGGGGCCTCCTGCGAGGTGATTaGACAGCTGGGACCTCTACA +
Preference number: 4 (lower is better)
Translates to: GTLCVLKRSSLVSSLPGGLLRGD*TAGTST
Trigger: TGTAGAGGTCCCAGCTGTCCAATCACCTCGCAGGAG...GCCCCCTGGCAGGGAGCTTACTAAGGAGGACCTTTTCAAGACACACAGCGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527430.1
CDS-3UTR CCA 90 bp CCACAGAGCGTTGAGCAGATGGCCTGGGACTCCCAGACCTGGCAGAGGGTTTTATTTGGAGCACACCACTaGCGAGACTCCGGACAAGTC +
Preference number: 4 (lower is better)
Translates to: PQSVEQMAWDSQTWQRVLFGAHH*RDSGQV
Trigger: GACTTGTCCGGAGTCTCGCCAGTGGTGTGCTCCAAA...TAAAACCCTCTGCCAGGTCTGGGAGTCCCAGGCCATCTGCTCAACGCTCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR CCA 90 bp AAATTGCTATCAGCCCCCGCCGCTGTCTGGTACGCGAGGAAACTTTCCGAGGACAGGGAGAGTCATGTCTaGGGCCCAGGGCTTTGCACA +
Preference number: 4 (lower is better)
Translates to: KLLSAPAAVWYARKLSEDRESHV*GPGLCT
Trigger: TGTGCAAAGCCCTGGGCCCCAGACATGACTCTCCCT...GTCCTCGGAAAGTTTCCTCGCGTACCAGACAGCGGCGGGGGCTGATAGCAATTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR CCA 90 bp CCACCCCTCCCAACAAGAGCAGAGGTGCCTCTCACCTCAACCCTCAGCCCTTTACTGTTTCTCGGGTGGTaGGGAGATTCCAGGGAGAGT +
Preference number: 4 (lower is better)
Translates to: PPLPTRAEVPLTSTLSPLLFLGW*GDSRES
Trigger: ACTCTCCCTGGAATCTCCCCACCACCCGAGAAACAG...TAAAGGGCTGAGGGTTGAGGTGAGAGGCACCTCTGCTCTTGTTGGGAGGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
CDS-3UTR CCA 90 bp CCACCCCTCCCAACAAGAGCAGAGGTGCCTCTCACCTCAACCCTCAGCCCTTTACAAACTCGGCATTCATaGCCGCAGCCCACTCATCCA +
Preference number: 4 (lower is better)
Translates to: PPLPTRAEVPLTSTLSPLQTRHS*PQPTHP
Trigger: TGGATGAGTGGGCTGCGGCCATGAATGCCGAGTTTG...TAAAGGGCTGAGGGTTGAGGTGAGAGGCACCTCTGCTCTTGTTGGGAGGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
CDS-3UTR CCA 90 bp CACACCCTGAAATGCACCCTTTGCTCCAAGCAGCCAGCGCCCTATCAACCTGGCCTCTCCACAGGGAGGTaGCTATGTACAGGACAGGAG +
Preference number: 4 (lower is better)
Translates to: HTLKCTLCSKQPAPYQPGLSTGR*LCTGQE
Trigger: CTCCTGTCCTGTACATAGCCACCTCCCTGTGGAGAG...GCCAGGTTGATAGGGCGCTGGCTGCTTGGAGCAAAGGGTGCATTTCAGGGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR CCA 90 bp CCACCCCTCCCAACAAGAGCAGAGGTGCCTCTCACCTCAACCCTCAGCCCTTTAACTCACAGCACCTGGTaGCCACACCCTGAAATGCAC +
Preference number: 4 (lower is better)
Translates to: PPLPTRAEVPLTSTLSPLTHSTW*PHPEMH
Trigger: GTGCATTTCAGGGTGTGGCCACCAGGTGCTGTGAGT...TAAAGGGCTGAGGGTTGAGGTGAGAGGCACCTCTGCTCTTGTTGGGAGGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR TCA 90 bp AGGACAAGAGTTCTTCAGTGCGGTTCAGCTCAAGGACACCTAGGCTTCCCCAGCTTCTGGCTGGGCCACTaGTTCTCCTCCCCAGTCTGT +
Preference number: 4 (lower is better)
Translates to: RTRVLQCGSAQGHLGFPSFWLGH*FSSPVC
Trigger: ACAGACTGGGGAGGAGAATCAGTGGCCCAGCCAGAA...GCTGGGGAAGCCTAGGTGTCCTTGAGCTGAACCGCACTGAAGAACTCTTGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR GCA 90 bp GCTGGCAGAGCCCCTGGGCCTATTTCCAAGCAGCCACCCCTCCCAACAAGAGCAACCAGGAGATCAAACTaGTCAGCAGCTTCAAACTCG +
Preference number: 4 (lower is better)
Translates to: AGRAPGPISKQPPLPTRATRRSN*SAASNS
Trigger: CGAGTTTGAAGCTGCTGAGCAGTTTGATCTCCTGGT...TGCTCTTGTTGGGAGGGGTGGCTGCTTGGAAATAGGCCCAGGGGCTCTGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
CDS-3UTR GCA 90 bp CAGGTAACAAGACCAGGGGAGGGGACCCTAAGTGTCCTCTCCACAGGGAGGTGGCCTCCAAGACAGAATTaGCCTCAGCCCACGAATTCT +
Preference number: 4 (lower is better)
Translates to: QVTRPGEGTLSVLSTGRWPPRQN*PQPTNS
Trigger: AGAATTCGTGGGCTGAGGGCAATTCTGTCTTGGAGG...CCACCTCCCTGTGGAGAGGACACTTAGGGTCCCCTCCCCTGGTCTTGTTACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR GCA 90 bp CCTCCCAACAAGAGCAGAGGTGCCTCTCACCTCAACCCTCAGCCCTTTAACTTCCTGAAATGCACCCTTTaGTCCAAGCAGCCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: PPNKSRGASHLNPQPFNFLKCTL*SKQPAP
Trigger: GGGCGCTGGCTGCTTGGAGCAAAGGGTGCATTTCAG...GAAGTTAAAGGGCTGAGGGTTGAGGTGAGAGGCACCTCTGCTCTTGTTGGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR GCA 90 bp AGCAGCCACCCCTCCCAACAAGAGCAGAGGTGCCTCTCACCTCAACCCTCAGCCACAAGAGTTCTTCAGTaGGGTTCAGCTCAAGGACAC +
Preference number: 4 (lower is better)
Translates to: SSHPSQQEQRCLSPQPSATRVLQ*GSAQGH
Trigger: GTGTCCTTGAGCTGAACCGCACTGAAGAACTCTTGT...GGCTGAGGGTTGAGGTGAGAGGCACCTCTGCTCTTGTTGGGAGGGGTGGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR CCA 90 bp GAAATCCTAGGGCTCCTGCGAGGTGATTGGACAGCTGGGACCTCTACAGCATGGTTTGGAGCACACCACTaGCGAGACTCCGGACAAGTC +
Preference number: 4 (lower is better)
Translates to: EILGLLRGDWTAGTSTAWFGAHH*RDSGQV
Trigger: GACTTGTCCGGAGTCTCGCCAGTGGTGTGCTCCAAA...CCATGCTGTAGAGGTCCCAGCTGTCCAATCACCTCGCAGGAGCCCTAGGATTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527430.1
CDS-3UTR CCA 90 bp CCACCCCTCCCAACAAGAGCAGAGGTGCCTCTCACCTCAACCCTCAGCCCTTTATTCCTAAAACCAAGATaGCTGCCGCTGCTGCCCAAG +
Preference number: 4 (lower is better)
Translates to: PPLPTRAEVPLTSTLSPLFLKPR*LPLLPK
Trigger: CTTGGGCAGCAGCGGCAGCCATCTTGGTTTTAGGAA...TAAAGGGCTGAGGGTTGAGGTGAGAGGCACCTCTGCTCTTGTTGGGAGGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
CDS-3UTR CCA 90 bp AGCAGAGGTGCCTCTCACCTCAACCCTCAGCCCTTTAACTTCTGGCTGGGCCACGGCCCATCTGGAAACTaGCTATGGTACTTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: SRGASHLNPQPFNFWLGHGPSGN*LWYFGE
Trigger: CTCCCCAAAGTACCATAGCCAGTTTCCAGATGGGCC...GTGGCCCAGCCAGAAGTTAAAGGGCTGAGGGTTGAGGTGAGAGGCACCTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
CDS-3UTR CCA 90 bp GTCTGTGGCCCATCTGGAAACTGGCTATGGTACTTTGGGGAGATAGGAAGGACAGGCTGGCAGAGCCCCTaGGCCTATTTCCAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: VCGPSGNWLWYFGEIGRTGWQSP*AYFQAA
Trigger: GGCTGCTTGGAAATAGGCCCAGGGGCTCTGCCAGCC...TGTCCTTCCTATCTCCCCAAAGTACCATAGCCAGTTTCCAGATGGGCCACAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
CDS-3UTR TCA 90 bp GACTTTCTTAGACATTTCCAAGTCTCTGGCGTCCAGCTCTCCTTCCTTGGAGCTCCCTGGGGACCTCGGTaGGTTTGGAGCACACCACTG +
Preference number: 4 (lower is better)
Translates to: DFLRHFQVSGVQLSFLGAPWGPR*VWSTPL
Trigger: CAGTGGTGTGCTCCAAACTCACCGAGGTCCCCAGGG...AGCTCCAAGGAAGGAGAGCTGGACGCCAGAGACTTGGAAATGTCTAAGAAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527430.1
CDS-3UTR CCA 90 bp AGGACAAGAGTTCTTCAGTGCGGTTCAGCTCAAGGACACCTAGGCTTCCCCAGCCTCCTGCGAGGTGATTaGACAGCTGGGACCTCTACA +
Preference number: 4 (lower is better)
Translates to: RTRVLQCGSAQGHLGFPSLLRGD*TAGTST
Trigger: TGTAGAGGTCCCAGCTGTCCAATCACCTCGCAGGAG...GCTGGGGAAGCCTAGGTGTCCTTGAGCTGAACCGCACTGAAGAACTCTTGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR CCA 90 bp GGCAGAGCCCAGGGTCTCCAGCCGGCTGTAGGAACGCCTGACTTTCTTAGACATACATTTCCAAGTCTCTaGCGTCCAGCTCTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: GRAQGLQPAVGTPDFLRHTFPSL*RPALLP
Trigger: AGGAAGGAGAGCTGGACGCCAGAGACTTGGAAATGT...ATGTCTAAGAAAGTCAGGCGTTCCTACAGCCGGCTGGAGACCCTGGGCTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527430.1
CDS-3UTR CCA 90 bp CCCAGTCTGTGGCCCATCTGGAAACTGGCTATGGTACTTTGGGGAGATAGGAAGAGGGAGAGTCATGTCTaGGGCCCAGGGCTTTGCACA +
Preference number: 4 (lower is better)
Translates to: PSLWPIWKLAMVLWGDRKRESHV*GPGLCT
Trigger: TGTGCAAAGCCCTGGGCCCCAGACATGACTCTCCCT...CTTCCTATCTCCCCAAAGTACCATAGCCAGTTTCCAGATGGGCCACAGACTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
CDS-3UTR CCA 90 bp CCAAGCAGCCACCCCTCCCAACAAGAGCAGAGGTGCCTCTCACCTCAACCCTCAAGTCTGTGGCCCATCTaGAAACTGGCTATGGTACTT +
Preference number: 4 (lower is better)
Translates to: PSSHPSQQEQRCLSPQPSSLWPI*KLAMVL
Trigger: AAGTACCATAGCCAGTTTCCAGATGGGCCACAGACT...TGAGGGTTGAGGTGAGAGGCACCTCTGCTCTTGTTGGGAGGGGTGGCTGCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
CDS-3UTR CCA 90 bp AAATTGCTATCAGCCCCCGCCGCTGTCTGGTACGCGAGGAAACTTTCCGAGGACGAAACTCACAGCACCTaGTGGCCACACCCTGAAATG +
Preference number: 4 (lower is better)
Translates to: KLLSAPAAVWYARKLSEDETHST*WPHPEM
Trigger: CATTTCAGGGTGTGGCCACCAGGTGCTGTGAGTTTC...GTCCTCGGAAAGTTTCCTCGCGTACCAGACAGCGGCGGGGGCTGATAGCAATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR CCA 90 bp CCCAGTCTGTGGCCCATCTGGAAACTGGCTATGGTACTTTGGGGAGATAGGAAGAGAGCGTTGAGCAGATaGCCTGGGACTCCCAGACCT +
Preference number: 4 (lower is better)
Translates to: PSLWPIWKLAMVLWGDRKRALSR*PGTPRP
Trigger: AGGTCTGGGAGTCCCAGGCCATCTGCTCAACGCTCT...CTTCCTATCTCCCCAAAGTACCATAGCCAGTTTCCAGATGGGCCACAGACTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR TCA 90 bp GACAAGAGTTCTTCAGTGCGGTTCAGCTCAAGGACACCTAGGCTTCCCCAGCAGTCAGACTCCACAGGCTaGATGTCCAGCTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: DKSSSVRFSSRTPRLPQQSDSTG*MSSFFL
Trigger: GAGGAAGAAGCTGGACATTCAGCCTGTGGAGTCTGA...CTGCTGGGGAAGCCTAGGTGTCCTTGAGCTGAACCGCACTGAAGAACTCTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR TCA 90 bp GAGCCACAGAAACTCACAGCACCTGGTGGCCACACCCTGAAATGCACCCTTTGCTGCTGCATCAGCCAGTaGGGACAAGAGTTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: EPQKLTAPGGHTLKCTLCCCISQ*GQEFFS
Trigger: ACTGAAGAACTCTTGTCCTCACTGGCTGATGCAGCA...GCAAAGGGTGCATTTCAGGGTGTGGCCACCAGGTGCTGTGAGTTTCTGTGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR TCA 90 bp CCACCCCTCCCAACAAGAGCAGAGGTGCCTCTCACCTCAACCCTCAGCCCTTTATCATCTGGTGACTCCTaGTTCTGCAGGACTAAGACA +
Preference number: 4 (lower is better)
Translates to: PPLPTRAEVPLTSTLSPLSSGDS*FCRTKT
Trigger: TGTCTTAGTCCTGCAGAATCAGGAGTCACCAGATGA...TAAAGGGCTGAGGGTTGAGGTGAGAGGCACCTCTGCTCTTGTTGGGAGGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR GCA 90 bp GGCTCGTTTTCTTTCTCCAAGAAAAAGGAAATCCTAGGGCTCCTGCGAGGTGATTGGGGCCCAGGGCTTTaGACAAACCCTGGGGACCTC +
Preference number: 4 (lower is better)
Translates to: GSFSFSKKKEILGLLRGDWGPGL*TNPGDL
Trigger: GAGGTCCCCAGGGTTTGTGCAAAGCCCTGGGCCCCA...ATCACCTCGCAGGAGCCCTAGGATTTCCTTTTTCTTGGAGAAAGAAAACGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000527430.1
CDS-3UTR GCA 90 bp GCACCCTTTGCTCCAAGCAGCCAGCGCCCTATCAACCTGGCATTTACCAAACATAGCAGGGGGCTTGCTTaGAGGTCTGACAAACCACAG +
Preference number: 4 (lower is better)
Translates to: APFAPSSQRPINLAFTKHSRGLA*RSDKPQ
Trigger: CTGTGGTTTGTCAGACCTGCAAGCAAGCCCCCTGCT...ATGTTTGGTAAATGCCAGGTTGATAGGGCGCTGGCTGCTTGGAGCAAAGGGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR CCA 90 bp CAGGTGGGTTCAAGAAGAAAGCCACCAACAGAAGGCAACTCAGGAGGGAGAGGCGGGACCTCTACAGCATaGGCCACGATCCTCTTTAAG +
Preference number: 4 (lower is better)
Translates to: QVGSRRKPPTEGNSGGRGGTSTA*ATILFK
Trigger: CTTAAAGAGGATCGTGGCCCATGCTGTAGAGGTCCC...GCCTCTCCCTCCTGAGTTGCCTTCTGTTGGTGGCTTTCTTCTTGAACCCACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
CDS-3UTR CCA 90 bp GACTTTCTTAGACATTTCCAAGTCTCTGGCGTCCAGCTCTCCTTCCTTGGAGCTCCAGCTCTCCTTCCTTaGAGCTGGACTCGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: DFLRHFQVSGVQLSFLGAPALLP*SWTRPQ
Trigger: CTGAGGCCGAGTCCAGCTCCAAGGAAGGAGAGCTGG...AGCTCCAAGGAAGGAGAGCTGGACGCCAGAGACTTGGAAATGTCTAAGAAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527430.1
CDS-3UTR CCA 90 bp AAATTGCTATCAGCCCCCGCCGCTGTCTGGTACGCGAGGAAACTTTCCGAGGACCTGGCTATGGTACTTTaGGGAGATAGGAAGGACAGG +
Preference number: 4 (lower is better)
Translates to: KLLSAPAAVWYARKLSEDLAMVL*GDRKDR
Trigger: CCTGTCCTTCCTATCTCCCCAAAGTACCATAGCCAG...GTCCTCGGAAAGTTTCCTCGCGTACCAGACAGCGGCGGGGGCTGATAGCAATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR CCA 90 bp AGCAGCCACCCCTCCCAACAAGAGCAGAGGTGCCTCTCACCTCAACCCTCAGCCTGTAGTACACACTTATaGTCTGAGACCCAACTAAGG +
Preference number: 4 (lower is better)
Translates to: SSHPSQQEQRCLSPQPSACSTHL*SETQLR
Trigger: CCTTAGTTGGGTCTCAGACCATAAGTGTGTACTACA...GGCTGAGGGTTGAGGTGAGAGGCACCTCTGCTCTTGTTGGGAGGGGTGGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR CCA 90 bp AGGCTCCCTACATCCTTCAAAACTCAGACTCCACAGGCTGAATGTCCAGCTTCTGGTAAGACTCCAGCGTaGGCCCTGTGCAAGGGACCA +
Preference number: 4 (lower is better)
Translates to: RLPTSFKTQTPQAECPASGKTPA*ALCKGP
Trigger: TGGTCCCTTGCACAGGGCCCACGCTGGAGTCTTACC...AGAAGCTGGACATTCAGCCTGTGGAGTCTGAGTTTTGAAGGATGTAGGGAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR TCA 90 bp CACCTCAGCGTCTACTTCCACGAACTTCTAAACATCAAAAGGTACAATGGCCAGAGGGCTCCTGCGAGGTaGTTGGACAGCTGGGACCTC +
Preference number: 4 (lower is better)
Translates to: HLSVYFHELLNIKRYNGQRAPAR*LDSWDL
Trigger: GAGGTCCCAGCTGTCCAATCACCTCGCAGGAGCCCT...CTGGCCATTGTACCTTTTGATGTTTAGAAGTTCGTGGAAGTAGACGCTGAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR GCA 90 bp CCACTGCATCTCATTCAACCAGGAGATCAAACTGCTCAGCAGCTTCAAACTCGGGGCAGACAGTCCTCATaGGCAGCACCAGCACACACA +
Preference number: 4 (lower is better)
Translates to: PLHLIQPGDQTAQQLQTRGRQSS*AAPAHT
Trigger: TGTGTGTGCTGGTGCTGCGCATGAGGACTGTCTGCC...CCGAGTTTGAAGCTGCTGAGCAGTTTGATCTCCTGGTTGAATGAGATGCAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524733.5
CDS-3UTR CCA 90 bp GTCTGTGGCCCATCTGGAAACTGGCTATGGTACTTTGGGGAGATAGGAAGGACACTCCTGCGAGGTGATTaGACAGCTGGGACCTCTACA +
Preference number: 4 (lower is better)
Translates to: VCGPSGNWLWYFGEIGRTLLRGD*TAGTST
Trigger: TGTAGAGGTCCCAGCTGTCCAATCACCTCGCAGGAG...TGTCCTTCCTATCTCCCCAAAGTACCATAGCCAGTTTCCAGATGGGCCACAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
CDS-3UTR CCA 90 bp GCTTCAAACTCGGCATTCATGGCCGCAGCCCACTCATCCAGCTCCGTTTTCAAGCTGGCTATGGTACTTTaGGGAGATAGGAAGGACAGG +
Preference number: 4 (lower is better)
Translates to: ASNSAFMAAAHSSSSVFKLAMVL*GDRKDR
Trigger: CCTGTCCTTCCTATCTCCCCAAAGTACCATAGCCAG...CTTGAAAACGGAGCTGGATGAGTGGGCTGCGGCCATGAATGCCGAGTTTGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524733.5
CDS-3UTR CCA 90 bp GGCCACACCCTGAAATGCACCCTTTGCTCCAAGCAGCCAGCGCCCTATCAACCTAGCGCCCTATCAACCTaGCATTTACCAAACATCTCA +
Preference number: 4 (lower is better)
Translates to: GHTLKCTLCSKQPAPYQPSALST*HLPNIS
Trigger: TGAGATGTTTGGTAAATGCCAGGTTGATAGGGCGCT...AGGTTGATAGGGCGCTGGCTGCTTGGAGCAAAGGGTGCATTTCAGGGTGTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR CCA 90 bp TATTTCCAAGCAGCCACCCCTCCCAACAAGAGCAGAGGTGCCTCTCACCTCAACTGTAAGAAATGGGTATaGGTGACAAGAGGGGCCACC +
Preference number: 4 (lower is better)
Translates to: YFQAATPPNKSRGASHLNCKKWV*VTRGAT
Trigger: GGTGGCCCCTCTTGTCACCCATACCCATTTCTTACA...GTTGAGGTGAGAGGCACCTCTGCTCTTGTTGGGAGGGGTGGCTGCTTGGAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR TCA 90 bp TACACAGGTGGGTTCAAGAAGAAAGCCACCAACAGAAGGCAACTCAGGAGGGAGTTCATCCAAGTACCCTaGCCCAGCACTCATCTTCCC +
Preference number: 4 (lower is better)
Translates to: YTGGFKKKATNRRQLRREFIQVP*PSTHLP
Trigger: GGGAAGATGAGTGCTGGGTCAGGGTACTTGGATGAA...CTCCCTCCTGAGTTGCCTTCTGTTGGTGGCTTTCTTCTTGAACCCACCTGTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR GCA 90 bp AGGACAAGAGTTCTTCAGTGCGGTTCAGCTCAAGGACACCTAGGCTTCCCCAGCACCAGGAGATCAAACTaGTCAGCAGCTTCAAACTCG +
Preference number: 4 (lower is better)
Translates to: RTRVLQCGSAQGHLGFPSTRRSN*SAASNS
Trigger: CGAGTTTGAAGCTGCTGAGCAGTTTGATCTCCTGGT...GCTGGGGAAGCCTAGGTGTCCTTGAGCTGAACCGCACTGAAGAACTCTTGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR GCA 90 bp AGGTGGGTTCAAGAAGAAAGCCACCAACAGAAGGCAACTCAGGAGGGAGAGGCCCCAGAGATCATGAGATaGATCCAGGCAGTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: RWVQEESHQQKATQEGEAPEIMR*IQAVFS
Trigger: TGAGAACACTGCCTGGATGCATCTCATGATCTCTGG...GGCCTCTCCCTCCTGAGTTGCCTTCTGTTGGTGGCTTTCTTCTTGAACCCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR CCA 90 bp GACTTTCTTAGACATTTCCAAGTCTCTGGCGTCCAGCTCTCCTTCCTTGGAGCTCTGTTTCTCGGGTGGTaGGGAGATTCCAGGGAGAGT +
Preference number: 4 (lower is better)
Translates to: DFLRHFQVSGVQLSFLGALFLGW*GDSRES
Trigger: ACTCTCCCTGGAATCTCCCCACCACCCGAGAAACAG...AGCTCCAAGGAAGGAGAGCTGGACGCCAGAGACTTGGAAATGTCTAAGAAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527430.1
CDS-3UTR CCA 90 bp ACACAGGTGGGTTCAAGAAGAAAGCCACCAACAGAAGGCAACTCAGGAGGGAGATTTCTGTTTCTCGGGTaGTGGGGAGATTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: TQVGSRRKPPTEGNSGGRFLFLG*WGDSRE
Trigger: CTCCCTGGAATCTCCCCACCACCCGAGAAACAGAAA...TCTCCCTCCTGAGTTGCCTTCTGTTGGTGGCTTTCTTCTTGAACCCACCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
CDS-3UTR CCA 90 bp CCTGGGCCTATTTCCAAGCAGCCACCCCTCCCAACAAGAGCAGAGGTGCCTCTCGAAAGAAGAGAAAGATaGGGAAATTCTCCAGAGATC +
Preference number: 4 (lower is better)
Translates to: PGPISKQPPLPTRAEVPLERRER*GNSPEI
Trigger: GATCTCTGGAGAATTTCCCCATCTTTCTCTTCTTTC...GAGAGGCACCTCTGCTCTTGTTGGGAGGGGTGGCTGCTTGGAAATAGGCCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR CCA 90 bp GCCGCTGTCTGGTACGCGAGGAAACTTTCCGAGGACTTTACAAGCATAGTTGCATGGGACTCCCAGACCTaGCAGAGGGTTTTATTAGGG +
Preference number: 4 (lower is better)
Translates to: AAVWYARKLSEDFTSIVAWDSQT*QRVLLG
Trigger: CCCTAATAAAACCCTCTGCCAGGTCTGGGAGTCCCA...TGCAACTATGCTTGTAAAGTCCTCGGAAAGTTTCCTCGCGTACCAGACAGCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR CCA 90 bp CCCACTGCATCTCATTCAACCAGGAGATCAAACTGCTCAGCAGCTTCAAACTCGGGGACCTCTACAGCATaGGCCACGATCCTCTTTAAG +
Preference number: 4 (lower is better)
Translates to: PTASHSTRRSNCSAASNSGTSTA*ATILFK
Trigger: CTTAAAGAGGATCGTGGCCCATGCTGTAGAGGTCCC...CGAGTTTGAAGCTGCTGAGCAGTTTGATCTCCTGGTTGAATGAGATGCAGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524733.5
CDS-3UTR CCA 90 bp GCCGCTGTCTGGTACGCGAGGAAACTTTCCGAGGACTTTACAAGCATAGTTGCAACATTTCCAAGTCTCTaGCGTCCAGCTCTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: AAVWYARKLSEDFTSIVATFPSL*RPALLP
Trigger: AGGAAGGAGAGCTGGACGCCAGAGACTTGGAAATGT...TGCAACTATGCTTGTAAAGTCCTCGGAAAGTTTCCTCGCGTACCAGACAGCGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR CCA 90 bp CCTCCCAACAAGAGCAGAGGTGCCTCTCACCTCAACCCTCAGCCCTTTAACTTCTCTGGAAACTGGCTATaGTACTTTGGGGAGATAGGA +
Preference number: 4 (lower is better)
Translates to: PPNKSRGASHLNPQPFNFSGNWL*YFGEIG
Trigger: TCCTATCTCCCCAAAGTACCATAGCCAGTTTCCAGA...GAAGTTAAAGGGCTGAGGGTTGAGGTGAGAGGCACCTCTGCTCTTGTTGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
CDS-3UTR CCA 90 bp CTGGGCCTATTTCCAAGCAGCCACCCCTCCCAACAAGAGCAGAGGTGCCTCTCACCCACGAATTCTCTCTaGGACTATTTACAGAATCAA +
Preference number: 4 (lower is better)
Translates to: LGLFPSSHPSQQEQRCLSPTNSL*DYLQNQ
Trigger: TTGATTCTGTAAATAGTCCCAGAGAGAATTCGTGGG...TGAGAGGCACCTCTGCTCTTGTTGGGAGGGGTGGCTGCTTGGAAATAGGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR CCA 90 bp GGACTATTTACAGAATCAAAGGGGAAACCCACGGAACTGAAAACCTCTTTACACGCCCCCGCCGCTGTCTaGTACGCGAGGAAACTTTCC +
Preference number: 4 (lower is better)
Translates to: GLFTESKGKPTELKTSLHAPAAV*YARKLS
Trigger: GGAAAGTTTCCTCGCGTACCAGACAGCGGCGGGGGC...GTGTAAAGAGGTTTTCAGTTCCGTGGGTTTCCCCTTTGATTCTGTAAATAGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR TCA 90 bp GGCAGCCTTCAAATCCACACTATTGAATCCACACGATGGAAAGAAGAGAAAGATAGACGATGGGCTTTCTaGCTGCAGCCGCACTGGGTG +
Preference number: 4 (lower is better)
Translates to: GSLQIHTIESTRWKEEKDRRWAF*LQPHWV
Trigger: CACCCAGTGCGGCTGCAGTCAGAAAGCCCATCGTCT...ATCTTTCTCTTCTTTCCATCGTGTGGATTCAATAGTGTGGATTTGAAGGCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR TCA 90 bp ACACAGGTGGGTTCAAGAAGAAAGCCACCAACAGAAGGCAACTCAGGAGGGAGAGGAAACCCACGGAACTaGAAACCTCTTTACACAGGT +
Preference number: 4 (lower is better)
Translates to: TQVGSRRKPPTEGNSGGRGNPRN*KPLYTG
Trigger: ACCTGTGTAAAGAGGTTTTCAGTTCCGTGGGTTTCC...TCTCCCTCCTGAGTTGCCTTCTGTTGGTGGCTTTCTTCTTGAACCCACCTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR TCA 90 bp CGCTGTCTGGTACGCGAGGAAACTTTCCGAGGACTTTACAAGCATAGTTGCAAACTCTGCATCATCTGGTaGCTCCTGATTCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: RCLVREETFRGLYKHSCKLCIIW*LLILQD
Trigger: GTCCTGCAGAATCAGGAGTCACCAGATGATGCAGAG...TTTGCAACTATGCTTGTAAAGTCCTCGGAAAGTTTCCTCGCGTACCAGACAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR GCA 90 bp CACTCATCCAGCTCCGTTTTCAAGATCTCTGGCATTTTCTTCTTCTTACGTTTCTCCGGACAAGTCTTCTaGCCCCAGCAGCCCCTCGAA +
Preference number: 4 (lower is better)
Translates to: HSSSSVFKISGIFFFLRFSGQVF*PQQPLE
Trigger: TTCGAGGGGCTGCTGGGGGCAGAAGACTTGTCCGGA...GAAACGTAAGAAGAAGAAAATGCCAGAGATCTTGAAAACGGAGCTGGATGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000524733.5
ENST00000527430.1
CDS-3UTR GCA 90 bp CCACCCCTCCCAACAAGAGCAGAGGTGCCTCTCACCTCAACCCTCAGCCCTTTACTTTACAAGCATAGTTaGAAAATGCTAGTAGGTCTG +
Preference number: 4 (lower is better)
Translates to: PPLPTRAEVPLTSTLSPLLYKHS*KMLVGL
Trigger: CAGACCTACTAGCATTTTGCAACTATGCTTGTAAAG...TAAAGGGCTGAGGGTTGAGGTGAGAGGCACCTCTGCTCTTGTTGGGAGGGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR GCA 90 bp AGCAGAGGTGCCTCTCACCTCAACCCTCAGCCCTTTAACTTCTGGCTGGGCCACAGGAACAGAGAACTTTaGAATGATGATCTCAACTCT +
Preference number: 4 (lower is better)
Translates to: SRGASHLNPQPFNFWLGHRNREL*NDDLNS
Trigger: AGAGTTGAGATCATCATTGCAAAGTTCTCTGTTCCT...GTGGCCCAGCCAGAAGTTAAAGGGCTGAGGGTTGAGGTGAGAGGCACCTCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR CCA 90 bp CTTCCTCCAAGACAGAATTGCCCTCAGCCCACGAATTCTCTCTGGGACTATTTATTCCTAAAACCAAGATaGCTGCCGCTGCTGCCCAAG +
Preference number: 4 (lower is better)
Translates to: LPPRQNCPQPTNSLWDYLFLKPR*LPLLPK
Trigger: CTTGGGCAGCAGCGGCAGCCATCTTGGTTTTAGGAA...TAAATAGTCCCAGAGAGAATTCGTGGGCTGAGGGCAATTCTGTCTTGGAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR CCA 90 bp CCCAGTCTGTGGCCCATCTGGAAACTGGCTATGGTACTTTGGGGAGATAGGAAGACCTCTTTACACAGGTaGGTTCAAGAAGAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: PSLWPIWKLAMVLWGDRKTSLHR*VQEESH
Trigger: GTGGCTTTCTTCTTGAACCCACCTGTGTAAAGAGGT...CTTCCTATCTCCCCAAAGTACCATAGCCAGTTTCCAGATGGGCCACAGACTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR TCA 90 bp CACTCATCCAGCTCCGTTTTCAAGATCTCTGGCATTTTCTTCTTCTTACGTTTCTTCTGGCTGGGCCACTaGTTCTCCTCCCCAGTCTGT +
Preference number: 4 (lower is better)
Translates to: HSSSSVFKISGIFFFLRFFWLGH*FSSPVC
Trigger: ACAGACTGGGGAGGAGAATCAGTGGCCCAGCCAGAA...GAAACGTAAGAAGAAGAAAATGCCAGAGATCTTGAAAACGGAGCTGGATGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524733.5
CDS-3UTR TCA 90 bp TCAACCCTCAGCCCTTTAACTTCTGGCTGGGCCACTGATTCTCCTCCCCAGTCTTCAAATCCACACTATTaGATCCACACGATGGAAAGA +
Preference number: 4 (lower is better)
Translates to: STLSPLTSGWATDSPPQSSNPHY*IHTMER
Trigger: TCTTTCCATCGTGTGGATTCAATAGTGTGGATTTGA...AGACTGGGGAGGAGAATCAGTGGCCCAGCCAGAAGTTAAAGGGCTGAGGGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR CCA 90 bp CCACTGCATCTCATTCAACCAGGAGATCAAACTGCTCAGCAGCTTCAAACTCGGAGTCTGTGGCCCATCTaGAAACTGGCTATGGTACTT +
Preference number: 4 (lower is better)
Translates to: PLHLIQPGDQTAQQLQTRSLWPI*KLAMVL
Trigger: AAGTACCATAGCCAGTTTCCAGATGGGCCACAGACT...CCGAGTTTGAAGCTGCTGAGCAGTTTGATCTCCTGGTTGAATGAGATGCAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524733.5
CDS-3UTR CCA 90 bp TCCTCCAAGACAGAATTGCCCTCAGCCCACGAATTCTCTCTGGGACTATTTACATCTGGAAACTGGCTATaGTACTTTGGGGAGATAGGA +
Preference number: 4 (lower is better)
Translates to: SSKTELPSAHEFSLGLFTSGNWL*YFGEIG
Trigger: TCCTATCTCCCCAAAGTACCATAGCCAGTTTCCAGA...TGTAAATAGTCCCAGAGAGAATTCGTGGGCTGAGGGCAATTCTGTCTTGGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR CCA 90 bp GGCCCATCTGGAAACTGGCTATGGTACTTTGGGGAGATAGGAAGGACAGGACGATTATTTTGTAAGAAATaGGTATGGGTGACAAGAGGG +
Preference number: 4 (lower is better)
Translates to: GPSGNWLWYFGEIGRTGRLFCKK*VWVTRG
Trigger: CCCTCTTGTCACCCATACCCATTTCTTACAAAATAA...TCGTCCTGTCCTTCCTATCTCCCCAAAGTACCATAGCCAGTTTCCAGATGGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS GCA 90 bp CTCCGGCGGCGGCAGCGGGAGGGAAGAGGCCATCTTTCACCGGACTaGGTCCCCCAAACGGCTCGACCTCACGTCTCCCGCGCGCCCTCC +
Preference number: 5 (lower is better)
Translates to: LRRRQREGRGHLSPD*VPQTARPHVSRAPS
Trigger: GGAGGGCGCGCGGGAGACGTGAGGTCGAGCCGTTTGGGGGACGCAGTCCGGTGAAAGATGGCCTCTTCCCTCCCGCTGCCGCCGCCGGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479032.6
CDS CCA 90 bp AAGGAGCGGCCTCCCGAGGAGGTGTCCGACCTCTGGCCTGGGGCCTaGCCAGGCCTGACCCTGGTCTCTGTGGTCGTGGGGCAGGTCAGG +
Preference number: 5 (lower is better)
Translates to: KERPPEEVSDLWPGA*PGLTLVSVVVGQVR
Trigger: CCTGACCTGCCCCACGACCACAGAGACCAGGGTCAGGCCTGGCCAGGCCCCAGGCCAGAGGTCGGACACCTCCTCGGGAGGCCGCTCCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529290.5
CDS CCA 90 bp CTGGCTGAAGGAGCGGCCTCCCGAGGAGGTGTCCGACCTCTGGCCTaGGGCCTGGCCAGGCCTGACCCTGGTCTCTGTGGTCGTGGGGCA +
Preference number: 5 (lower is better)
Translates to: LAEGAASRGGVRPLA*GLARPDPGLCGRGA
Trigger: TGCCCCACGACCACAGAGACCAGGGTCAGGCCTGGCCAGGCCCCAGGCCAGAGGTCGGACACCTCCTCGGGAGGCCGCTCCTTCAGCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529290.5
CDS GCA 90 bp GGTGAGTTTGGAGCACACCACTGGCGAGACTCCGGACAAGTCTTCTaGCCCCAGCAGCCCCTCGAAGCCAAAGCAGGACCGGCGGCCCTA +
Preference number: 5 (lower is better)
Translates to: GEFGAHHWRDSGQVF*PQQPLEAKAGPAAL
Trigger: TAGGGCCGCCGGTCCTGCTTTGGCTTCGAGGGGCTGCTGGGGGCAGAAGACTTGTCCGGAGTCTCGCCAGTGGTGTGCTCCAAACTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524733.5
CDS GCA 90 bp GTCTCTGTGGTCGTGGGGCAGGTCAGGCAGCTTGAAGAGGAGACCTaGCTTCCGGGGGTTTGGGTCACTGAGCAGAGCCACCTCCGGCAG +
Preference number: 5 (lower is better)
Translates to: VSVVVGQVRQLEEET*LPGVWVTEQSHLRQ
Trigger: CTGCCGGAGGTGGCTCTGCTCAGTGACCCAAACCCCCGGAAGGCAGGTCTCCTCTTCAAGCTGCCTGACCTGCCCCACGACCACAGAGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525464.1
CDS GCA 90 bp CCGCCCTGCGGGAAAGGAAGCGGAAGTGACGTAGGGCTAGCGGTCTaGGGCCCTCGGAACCCCGAGTCTTTTCCACCCGTCTTCACCTCT +
Preference number: 5 (lower is better)
Translates to: PPCGKGSGSDVGLAV*GPRNPESFPPVFTS
Trigger: AGAGGTGAAGACGGGTGGAAAAGACTCGGGGTTCCGAGGGCCGCAGACCGCTAGCCCTACGTCACTTCCGCTTCCTTTCCCGCAGGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531401.5
CDS CCA 90 bp GGGCAGGTCAGGCAGCTTGAAGAGGAGACCTGCCTTCCGGGGGTTTaGGTCACTGCAGGCAGAGACAGCTCGAGTGAGCAGCATGGGGCA +
Preference number: 5 (lower is better)
Translates to: GQVRQLEEETCLPGV*VTAGRDSSSEQHGA
Trigger: TGCCCCATGCTGCTCACTCGAGCTGTCTCTGCCTGCAGTGACCCAAACCCCCGGAAGGCAGGTCTCCTCTTCAAGCTGCCTGACCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529290.5
CDS GCA 90 bp GTCTCTGTGGTCGTGGGGCAGGTCAGGCAGCTTGAAGAGGAGACCTaGCTTCCGGGGGTTTGGGTCACTGCAGGCAGAGACAGCTCGAGT +
Preference number: 5 (lower is better)
Translates to: VSVVVGQVRQLEEET*LPGVWVTAGRDSSS
Trigger: ACTCGAGCTGTCTCTGCCTGCAGTGACCCAAACCCCCGGAAGGCAGGTCTCCTCTTCAAGCTGCCTGACCTGCCCCACGACCACAGAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529290.5
CDS CCA 90 bp CAGATTTCAGGGAGGATGCTCGGGAGTTCAGAGCCTGATTTCCGCTaGGACCTCCGCAGAGGCTTAGTAGGAGATGGGGCCCTTGGCCCG +
Preference number: 5 (lower is better)
Translates to: QISGRMLGSSEPDFR*DLRRGLVGDGALGP
Trigger: CGGGCCAAGGGCCCCATCTCCTACTAAGCCTCTGCGGAGGTCCCAGCGGAAATCAGGCTCTGAACTCCCGAGCATCCTCCCTGAAATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000404147.3
CDS CCA 90 bp CAGATTTCAGGGAGGATGCTCGGGAGTTCAGAGCCTGATTTCCGCTaGGACCTCCGCAGAGGCTTAGTAGGAGATGGGGCCCGGAGCGCT +
Preference number: 5 (lower is better)
Translates to: QISGRMLGSSEPDFR*DLRRGLVGDGARSA
Trigger: AGCGCTCCGGGCCCCATCTCCTACTAAGCCTCTGCGGAGGTCCCAGCGGAAATCAGGCTCTGAACTCCCGAGCATCCTCCCTGAAATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527430.1
CDS CCA 90 bp AGGAAGGTGGCTCCAAGTTCCGCTCCTCGGAAGCCTGAGGGCCCTTaGGTTCTTGCTCCTCAACAGGCTGCACCACTGGCTTGTTGGCCA +
Preference number: 5 (lower is better)
Translates to: RKVAPSSAPRKPEGP*VLAPQQAAPLACWP
Trigger: TGGCCAACAAGCCAGTGGTGCAGCCTGTTGAGGAGCAAGAACCCAAGGGCCCTCAGGCTTCCGAGGAGCGGAACTTGGAGCCACCTTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525464.1
ENST00000529290.5
ENST00000533015.5
CDS CCA 90 bp CAGATTTCAGGGAGGATGCTCGGGAGTTCAGAGCCTGATTTCCGCTaGGACCTCCGCAGAGGCTTAGTAGGAGATGGGGCCCTTGGCCCC +
Preference number: 5 (lower is better)
Translates to: QISGRMLGSSEPDFR*DLRRGLVGDGALGP
Trigger: GGGGCCAAGGGCCCCATCTCCTACTAAGCCTCTGCGGAGGTCCCAGCGGAAATCAGGCTCTGAACTCCCGAGCATCCTCCCTGAAATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531401.5
CDS-3UTR CAA 90 bp CCACAGAGCGTTGAGCAGATGGCCTGGGACTCCCAGACCTGGCAGAGGGTTTTAGGGACCTCGGTGAGTTaGGAGCACACCACTGGCGAG +
Preference number: 5 (lower is better)
Translates to: PQSVEQMAWDSQTWQRVLGTSVS*EHTTGE
Trigger: CTCGCCAGTGGTGTGCTCCAAACTCACCGAGGTCCC...TAAAACCCTCTGCCAGGTCTGGGAGTCCCAGGCCATCTGCTCAACGCTCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR CAA 90 bp GGGACGCTGTGTGTCTTGAAAAGGTCCTCCTTAGTAAGCTCCCTGCCAGGGGGCGGGACCTCGGTGAGTTaGGAGCACACCACTGGCGAG +
Preference number: 5 (lower is better)
Translates to: GTLCVLKRSSLVSSLPGGGTSVS*EHTTGE
Trigger: CTCGCCAGTGGTGTGCTCCAAACTCACCGAGGTCCC...GCCCCCTGGCAGGGAGCTTACTAAGGAGGACCTTTTCAAGACACACAGCGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527430.1
CDS TCA 90 bp AGTTGTTCTGAGGAAGGTGGCTCCAAGTTCCGCTCCTCGGAAGCCTaGGGGCCCTTGGGTTCTTGCTCCTCAACAGGCTGCACCACTGGC +
Preference number: 5 (lower is better)
Translates to: SCSEEGGSKFRSSEA*GPLGSCSSTGCTTG
Trigger: GCCAGTGGTGCAGCCTGTTGAGGAGCAAGAACCCAAGGGCCCTCAGGCTTCCGAGGAGCGGAACTTGGAGCCACCTTCCTCAGAACAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525464.1
ENST00000529290.5
ENST00000533015.5
CDS CCA 90 bp CAGATTTCAGGGAGGATGCTCGGGAGTTCAGAGCCTGATTTCCGCTaGGACCTCCGCAGAGGCTTAGTAGGAGATGGGGCCCTTGGCCCT +
Preference number: 5 (lower is better)
Translates to: QISGRMLGSSEPDFR*DLRRGLVGDGALGP
Trigger: AGGGCCAAGGGCCCCATCTCCTACTAAGCCTCTGCGGAGGTCCCAGCGGAAATCAGGCTCTGAACTCCCGAGCATCCTCCCTGAAATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462902.1
ENST00000479032.6
ENST00000533015.5
CDS CCA 90 bp GTGGGCAGGTTCTGCAGCTTCTCCCCCAGGGCCAGGTTGTGCACTTaGGTGGTGTTCAGTGACTCCCGAAGCCTCATGCAGTCATTCTGC +
Preference number: 5 (lower is better)
Translates to: VGRFCSFSPRARLCT*VVFSDSRSLMQSFC
Trigger: GCAGAATGACTGCATGAGGCTTCGGGAGTCACTGAACACCACCCAAGTGCACAACCTGGCCCTGGGGGAGAAGCTGCAGAACCTGCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525464.1
ENST00000529290.5
CDS CCA 90 bp GCAGGGCCTTCACTTCATCCTGGATGGCCTGGGCCTCCTCCTGGATaGCCTGGGCTCCCTCCTTCAGGCTCTTATACAATAAGGTGGGCA +
Preference number: 5 (lower is better)
Translates to: AGPSLHPGWPGPPPG*PGLPPSGSYTIRWA
Trigger: TGCCCACCTTATTGTATAAGAGCCTGAAGGAGGGAGCCCAGGCCATCCAGGAGGAGGCCCAGGCCATCCAGGATGAAGTGAAGGCCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525464.1
ENST00000529290.5
CDS-3UTR CAA 90 bp CACACAGGTAACAAGACCAGGGGAGGGGACCCTAAGTGTCCTCTCCACAGGGAGTCCCCAGCAGGGGGCTaGCTTGCAGGTCTGACAAAC +
Preference number: 5 (lower is better)
Translates to: HTGNKTRGGDPKCPLHRESPAGG*LAGLTN
Trigger: GTTTGTCAGACCTGCAAGCAAGCCCCCTGCTGGGGA...CTCCCTGTGGAGAGGACACTTAGGGTCCCCTCCCCTGGTCTTGTTACCTGTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS TCA 90 bp TGTCTTCGGCCAGATTTCAGGGAGGATGCTCGGGAGTTCAGAGCCTaGTTTCCGCTGGGACCTCCGCAGAGGCTTAGTAGGAGATGGGGC +
Preference number: 5 (lower is better)
Translates to: CLRPDFREDAREFRA*FPLGPPQRLSRRWG
Trigger: GCCCCATCTCCTACTAAGCCTCTGCGGAGGTCCCAGCGGAAATCAGGCTCTGAACTCCCGAGCATCCTCCCTGAAATCTGGCCGAAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000275517.8
ENST00000404147.3
ENST00000462902.1
ENST00000479032.6
ENST00000527430.1
ENST00000531401.5
ENST00000533015.5
CDS-3UTR CAA 90 bp GCTCTCCTTCCTTGGAGCTGGACTCGGCCTCAGGGTTCGGCACAGGAGTGCTGGGGGACGCTGTGTGTCTaGAAAAGGTCCTCCTTAGTA +
Preference number: 5 (lower is better)
Translates to: ALLPWSWTRPQGSAQECWGTLCV*KRSSLV
Trigger: TACTAAGGAGGACCTTTTCAAGACACACAGCGTCCC...CCAGCACTCCTGTGCCGAACCCTGAGGCCGAGTCCAGCTCCAAGGAAGGAGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527430.1
CDS-3UTR CAA 90 bp CCTCCCAACAAGAGCAGAGGTGCCTCTCACCTCAACCCTCAGCCCTTTAACTTCGGGACCTCGGTGAGTTaGGAGCACACCACTGGCGAG +
Preference number: 5 (lower is better)
Translates to: PPNKSRGASHLNPQPFNFGTSVS*EHTTGE
Trigger: CTCGCCAGTGGTGTGCTCCAAACTCACCGAGGTCCC...GAAGTTAAAGGGCTGAGGGTTGAGGTGAGAGGCACCTCTGCTCTTGTTGGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000524733.5
CDS GCA 90 bp AATAAGGTGGGCAGGTTCTGCAGCTTCTCCCCCAGGGCCAGGTTGTaGACTTGGGTGGTGTTCAGTGACTCCCGAAGCCTCATGCAGTCA +
Preference number: 5 (lower is better)
Translates to: NKVGRFCSFSPRARL*TWVVFSDSRSLMQS
Trigger: TGACTGCATGAGGCTTCGGGAGTCACTGAACACCACCCAAGTGCACAACCTGGCCCTGGGGGAGAAGCTGCAGAACCTGCCCACCTTATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525464.1
ENST00000529290.5
CDS CCA 90 bp GCAGGTTCTGCAGCTTCTCCCCCAGGGCCAGGTTGTGCACTTGGGTaGTGTTCAGTGACTCCCGAAGCCTCATGCAGTCATTCTGCAACT +
Preference number: 5 (lower is better)
Translates to: AGSAASPPGPGCALG*CSVTPEASCSHSAT
Trigger: AGTTGCAGAATGACTGCATGAGGCTTCGGGAGTCACTGAACACCACCCAAGTGCACAACCTGGCCCTGGGGGAGAAGCTGCAGAACCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525464.1
ENST00000529290.5
CDS TCA 90 bp CCTCTACAGCATGGGCCACGATCCTCTTTAAGACGATGGGCTTTCTaGCTGCAGCCGCACTGGGTGTCTTCGGCCAGATTTCAGGGAGGA +
Preference number: 5 (lower is better)
Translates to: PLQHGPRSSLRRWAF*LQPHWVSSARFQGG
Trigger: TCCTCCCTGAAATCTGGCCGAAGACACCCAGTGCGGCTGCAGTCAGAAAGCCCATCGTCTTAAAGAGGATCGTGGCCCATGCTGTAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000275517.8
ENST00000404147.3
ENST00000462902.1
ENST00000479032.6
ENST00000527430.1
ENST00000531401.5
ENST00000533015.5
CDS TCA 90 bp TGTTCAGTGACTCCCGAAGCCTCATGCAGTCATTCTGCAACTGCCTaGTCTCCTTTGAGGTCCGCTGGGGGCCCCAGTCCTCCTGATCTA +
Preference number: 5 (lower is better)
Translates to: CSVTPEASCSHSATA*SPLRSAGGPSPPDL
Trigger: TAGATCAGGAGGACTGGGGCCCCCAGCGGACCTCAAAGGAGATCAGGCAGTTGCAGAATGACTGCATGAGGCTTCGGGAGTCACTGAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525464.1
ENST00000529290.5
CDS-3UTR CAA 90 bp AGCAGAGGTGCCTCTCACCTCAACCCTCAGCCCTTTAACTTCTGGCTGGGCCACGGGACGCTGTGTGTCTaGAAAAGGTCCTCCTTAGTA +
Preference number: 5 (lower is better)
Translates to: SRGASHLNPQPFNFWLGHGTLCV*KRSSLV
Trigger: TACTAAGGAGGACCTTTTCAAGACACACAGCGTCCC...GTGGCCCAGCCAGAAGTTAAAGGGCTGAGGGTTGAGGTGAGAGGCACCTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS-3UTR CAA 90 bp TATTTCCAAGCAGCCACCCCTCCCAACAAGAGCAGAGGTGCCTCTCACCTCAACTCCTCCAAGACAGAATaGCCCTCAGCCCACGAATTC +
Preference number: 5 (lower is better)
Translates to: YFQAATPPNKSRGASHLNSSKTE*PSAHEF
Trigger: GAATTCGTGGGCTGAGGGCAATTCTGTCTTGGAGGA...GTTGAGGTGAGAGGCACCTCTGCTCTTGTTGGGAGGGGTGGCTGCTTGGAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275517.8
CDS CCA 90 bp CAACCAGGAGATCAAACTGCTCAGCAGCTTCAAACTCGGCATTCATaGCCGCAGCCCACTCATCCAGCTCCGTTTTCTGAGGGAAGAGAA +
Preference number: 5 (lower is better)
Translates to: QPGDQTAQQLQTRHS*PQPTHPAPFSEGRE
Trigger: TTCTCTTCCCTCAGAAAACGGAGCTGGATGAGTGGGCTGCGGCCATGAATGCCGAGTTTGAAGCTGCTGAGCAGTTTGATCTCCTGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404147.3
CDS TCA 72 bp GCCCTTGGCCCCGCCCTGCGGGAAAGGAAGCGGAAGTaGCGTAGGGCTAGCGGTCTGCGGCCCTCGGAACCC +
Preference number: 6 (lower is better)
Translates to: ALGPALRERKRK*RRASGLRPSEP
Trigger: GGGTTCCGAGGGCCGCAGACCGCTAGCCCTACGTCACTTCCGCTTCCTTTCCCGCAGGGCGGGGCCAAGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531401.5
CDS GCA 72 bp CGGCAGCGGGAGGGAAGAGGCCATCTTTCACCGGACTaGGTCCCCCAAACGGCTCGACCTCACGTCTCCCGC +
Preference number: 6 (lower is better)
Translates to: RQREGRGHLSPD*VPQTARPHVSR
Trigger: GCGGGAGACGTGAGGTCGAGCCGTTTGGGGGACGCAGTCCGGTGAAAGATGGCCTCTTCCCTCCCGCTGCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479032.6
CDS CCA 72 bp TTTCCGCTGGGACCTCCGCAGAGGCTTAGTAGGAGATaGGGCCCTTGGCCCGGAGCGCTGAGCGGCTCCTCC +
Preference number: 6 (lower is better)
Translates to: FPLGPPQRLSRR*GPWPGALSGSS
Trigger: GGAGGAGCCGCTCAGCGCTCCGGGCCAAGGGCCCCATCTCCTACTAAGCCTCTGCGGAGGTCCCAGCGGAAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275517.8
ENST00000404147.3
CDS CCA 72 bp GCAGGACCGGCGGCCCTAGGGCTCCTGCGAGGTGATTaGACAGCTGGGACCTCTACAGCATGGGCCACGATC +
Preference number: 6 (lower is better)
Translates to: AGPAALGLLRGD*TAGTSTAWATI
Trigger: GATCGTGGCCCATGCTGTAGAGGTCCCAGCTGTCCAATCACCTCGCAGGAGCCCTAGGGCCGCCGGTCCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524733.5
CDS CCA 72 bp TTTCCGCTGGGACCTCCGCAGAGGCTTAGTAGGAGATaGGGCCCTTGGCCCCGCCCTGCGGGAAAGGAAGCG +
Preference number: 6 (lower is better)
Translates to: FPLGPPQRLSRR*GPWPRPAGKEA
Trigger: CGCTTCCTTTCCCGCAGGGCGGGGCCAAGGGCCCCATCTCCTACTAAGCCTCTGCGGAGGTCCCAGCGGAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531401.5
CDS TCA 72 bp CAAAGCAGGACCGGCGGCCCTAGGGCTCCTGCGAGGTaGTTGGACAGCTGGGACCTCTACAGCATGGGCCAC +
Preference number: 6 (lower is better)
Translates to: QSRTGGPRAPAR*LDSWDLYSMGH
Trigger: GTGGCCCATGCTGTAGAGGTCCCAGCTGTCCAATCACCTCGCAGGAGCCCTAGGGCCGCCGGTCCTGCTTTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524733.5
CDS GCA 72 bp GTCGTGGGGCAGGTCAGGCAGCTTGAAGAGGAGACCTaGCTTCCGGGGGTTTGGGTCACTGAGCAGAGCCAC +
Preference number: 6 (lower is better)
Translates to: VVGQVRQLEEET*LPGVWVTEQSH
Trigger: GTGGCTCTGCTCAGTGACCCAAACCCCCGGAAGGCAGGTCTCCTCTTCAAGCTGCCTGACCTGCCCCACGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525464.1
CDS GCA 72 bp GTCGTGGGGCAGGTCAGGCAGCTTGAAGAGGAGACCTaGCTTCCGGGGGTTTGGGTCACTGCAGGCAGAGAC +
Preference number: 6 (lower is better)
Translates to: VVGQVRQLEEET*LPGVWVTAGRD
Trigger: GTCTCTGCCTGCAGTGACCCAAACCCCCGGAAGGCAGGTCTCCTCTTCAAGCTGCCTGACCTGCCCCACGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529290.5
CDS GCA 72 bp GGGAAAGGAAGCGGAAGTGACGTAGGGCTAGCGGTCTaGGGCCCTCGGAACCCCGAGTCTTTTCCACCCGTC +
Preference number: 6 (lower is better)
Translates to: GKGSGSDVGLAV*GPRNPESFPPV
Trigger: GACGGGTGGAAAAGACTCGGGGTTCCGAGGGCCGCAGACCGCTAGCCCTACGTCACTTCCGCTTCCTTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531401.5
CDS GCA 72 bp GGCAGGTTCTGCAGCTTCTCCCCCAGGGCCAGGTTGTaGACTTGGGTGGTGTTCAGTGACTCCCGAAGCCTC +
Preference number: 6 (lower is better)
Translates to: GRFCSFSPRARL*TWVVFSDSRSL
Trigger: GAGGCTTCGGGAGTCACTGAACACCACCCAAGTGCACAACCTGGCCCTGGGGGAGAAGCTGCAGAACCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525464.1
ENST00000529290.5
CDS CCA 72 bp GGGAGGATGCTCGGGAGTTCAGAGCCTGATTTCCGCTaGGACCTCCGCAGAGGCTTAGTAGGAGATGGGGCC +
Preference number: 6 (lower is better)
Translates to: GRMLGSSEPDFR*DLRRGLVGDGA
Trigger: GGCCCCATCTCCTACTAAGCCTCTGCGGAGGTCCCAGCGGAAATCAGGCTCTGAACTCCCGAGCATCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000275517.8
ENST00000404147.3
ENST00000462902.1
ENST00000479032.6
ENST00000527430.1
ENST00000531401.5
ENST00000533015.5
CDS CCA 72 bp GCTCCAAGTTCCGCTCCTCGGAAGCCTGAGGGCCCTTaGGTTCTTGCTCCTCAACAGGCTGCACCACTGGCT +
Preference number: 6 (lower is better)
Translates to: APSSAPRKPEGP*VLAPQQAAPLA
Trigger: AGCCAGTGGTGCAGCCTGTTGAGGAGCAAGAACCCAAGGGCCCTCAGGCTTCCGAGGAGCGGAACTTGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525464.1
ENST00000529290.5
ENST00000533015.5
CDS CAA 90 bp TGGCTCCAAGTTCCGCTCCTCGGAAGCCTGAGGGCCCTTGGGTTCTaGCTCCTCAACAGGCTGCACCACTGGCTTGTTGGCCAGCTTGGA +
Preference number: 6 (lower is better)
Translates to: WLQVPLLGSLRALGF*LLNRLHHWLVGQLG
Trigger: TCCAAGCTGGCCAACAAGCCAGTGGTGCAGCCTGTTGAGGAGCAAGAACCCAAGGGCCCTCAGGCTTCCGAGGAGCGGAACTTGGAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525464.1
ENST00000529290.5
ENST00000533015.5
CDS GCA 72 bp CCGCACTGGGTGTCTTCGGCCAGATTTCAGGGAGGATaGTCGGGAGTTCAGAGCCTGATTTCCGCTGGGACC +
Preference number: 6 (lower is better)
Translates to: PHWVSSARFQGG*SGVQSLISAGT
Trigger: GGTCCCAGCGGAAATCAGGCTCTGAACTCCCGAGCATCCTCCCTGAAATCTGGCCGAAGACACCCAGTGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000275517.8
ENST00000404147.3
ENST00000462902.1
ENST00000479032.6
ENST00000527430.1
ENST00000531401.5
ENST00000533015.5
CDS GCA 72 bp AGGGAACATGGTGGCTGGAGCATCTCACCCACACCCTaGAGGTGCTGCCTATCCCCCAAAAGAGCCAGAGCC +
Preference number: 6 (lower is better)
Translates to: REHGGWSISPTP*RCCLSPKRARA
Trigger: GGCTCTGGCTCTTTTGGGGGATAGGCAGCACCTGCAGGGTGTGGGTGAGATGCTCCAGCCACCATGTTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404147.3
CDS CCA 72 bp CTGCCCCTAAGAGACCTAGGGCTCCTGCGAGGTGATTaGACAGCTGGGACCTCTACAGCATGGGCCACGATC +
Preference number: 6 (lower is better)
Translates to: LPLRDLGLLRGD*TAGTSTAWATI
Trigger: GATCGTGGCCCATGCTGTAGAGGTCCCAGCTGTCCAATCACCTCGCAGGAGCCCTAGGTCTCTTAGGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533015.5
CDS TCA 72 bp ACTCCCGAAGCCTCATGCAGTCATTCTGCAACTGCCTaGTCTCCTTTGAGGTCCGCTGGGGGCCCCAGTCCT +
Preference number: 6 (lower is better)
Translates to: TPEASCSHSATA*SPLRSAGGPSP
Trigger: AGGACTGGGGCCCCCAGCGGACCTCAAAGGAGATCAGGCAGTTGCAGAATGACTGCATGAGGCTTCGGGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525464.1
ENST00000529290.5
CDS TCA 72 bp TTGTCTGCCCCTAAGAGACCTAGGGCTCCTGCGAGGTaGTTGGACAGCTGGGACCTCTACAGCATGGGCCAC +
Preference number: 6 (lower is better)
Translates to: LSAPKRPRAPAR*LDSWDLYSMGH
Trigger: GTGGCCCATGCTGTAGAGGTCCCAGCTGTCCAATCACCTCGCAGGAGCCCTAGGTCTCTTAGGGGCAGACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533015.5
CDS CCA 72 bp GCAGCTTCTCCCCCAGGGCCAGGTTGTGCACTTGGGTaGTGTTCAGTGACTCCCGAAGCCTCATGCAGTCAT +
Preference number: 6 (lower is better)
Translates to: AASPPGPGCALG*CSVTPEASCSH
Trigger: ATGACTGCATGAGGCTTCGGGAGTCACTGAACACCACCCAAGTGCACAACCTGGCCCTGGGGGAGAAGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525464.1
ENST00000529290.5
CDS CAA 90 bp GGTTCTTGCTCCTCAACAGGCTGCACCACTGGCTTGTTGGCCAGCTaGGAGTGGGCTCTTTGTCTGCCCCTAAGAGACCTAGGGCTCCTG +
Preference number: 6 (lower is better)
Translates to: GSCSSTGCTTGLLAS*EWALCLPLRDLGLL
Trigger: CAGGAGCCCTAGGTCTCTTAGGGGCAGACAAAGAGCCCACTCCAAGCTGGCCAACAAGCCAGTGGTGCAGCCTGTTGAGGAGCAAGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533015.5
CDS TCA 72 bp CCAGATTTCAGGGAGGATGCTCGGGAGTTCAGAGCCTaGTTTCCGCTGGGACCTCCGCAGAGGCTTAGTAGG +
Preference number: 6 (lower is better)
Translates to: PDFREDAREFRA*FPLGPPQRLSR
Trigger: CCTACTAAGCCTCTGCGGAGGTCCCAGCGGAAATCAGGCTCTGAACTCCCGAGCATCCTCCCTGAAATCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000275517.8
ENST00000404147.3
ENST00000462902.1
ENST00000479032.6
ENST00000527430.1
ENST00000531401.5
ENST00000533015.5
CDS CAA 90 bp GGTTCTTGCTCCTCAACAGGCTGCACCACTGGCTTGTTGGCCAGCTaGGAGTGGGCTCTTTGTCTGCCCCTAAGAGACAAGATCTCTGGC +
Preference number: 6 (lower is better)
Translates to: GSCSSTGCTTGLLAS*EWALCLPLRDKISG
Trigger: GCCAGAGATCTTGTCTCTTAGGGGCAGACAAAGAGCCCACTCCAAGCTGGCCAACAAGCCAGTGGTGCAGCCTGTTGAGGAGCAAGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525464.1
ENST00000529290.5
CDS CCA 72 bp AGAAATGAGGAGCAGGTGAGTGAGAAGGGAACATGGTaGCTGGAGCATCTCACCCACACCCTGCAGGTGCTG +
Preference number: 6 (lower is better)
Translates to: RNEEQVSEKGTW*LEHLTHTLQVL
Trigger: CAGCACCTGCAGGGTGTGGGTGAGATGCTCCAGCCACCATGTTCCCTTCTCACTCACCTGCTCCTCATTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404147.3
CDS CCA 72 bp TCACTTCATCCTGGATGGCCTGGGCCTCCTCCTGGATaGCCTGGGCTCCCTCCTTCAGGCTCTTATACAATA +
Preference number: 6 (lower is better)
Translates to: SLHPGWPGPPPG*PGLPPSGSYTI
Trigger: TATTGTATAAGAGCCTGAAGGAGGGAGCCCAGGCCATCCAGGAGGAGGCCCAGGCCATCCAGGATGAAGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525464.1
ENST00000529290.5
CDS TCA 72 bp CATGGGCCACGATCCTCTTTAAGACGATGGGCTTTCTaGCTGCAGCCGCACTGGGTGTCTTCGGCCAGATTT +
Preference number: 6 (lower is better)
Translates to: HGPRSSLRRWAF*LQPHWVSSARF
Trigger: AAATCTGGCCGAAGACACCCAGTGCGGCTGCAGTCAGAAAGCCCATCGTCTTAAAGAGGATCGTGGCCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000275517.8
ENST00000404147.3
ENST00000462902.1
ENST00000479032.6
ENST00000527430.1
ENST00000531401.5
ENST00000533015.5
CDS TCA 72 bp CTCCAAGAAAAAGGAAATCCTAGGGCTCCTGCGAGGTaGTTGGACAGCTGGGACCTGCGGGGGACAATACCA +
Preference number: 6 (lower is better)
Translates to: LQEKGNPRAPAR*LDSWDLRGTIP
Trigger: TGGTATTGTCCCCCGCAGGTCCCAGCTGTCCAATCACCTCGCAGGAGCCCTAGGATTTCCTTTTTCTTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000531401.5
CDS CCA 72 bp GATCAAACTGCTCAGCAGCTTCAAACTCGGCATTCATaGCCGCAGCCCACTCATCCAGCTCCGTTTTCTGAG +
Preference number: 6 (lower is better)
Translates to: DQTAQQLQTRHS*PQPTHPAPFSE
Trigger: CTCAGAAAACGGAGCTGGATGAGTGGGCTGCGGCCATGAATGCCGAGTTTGAAGCTGCTGAGCAGTTTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404147.3
CDS CCA 72 bp GTACTCCTGGATCTCCGAGTCCGATTCAGGGTCTTTTaGCTCAGTGGGCTCAGAGGTGTTCAGGAGTGTAAA +
Preference number: 6 (lower is better)
Translates to: VLLDLRVRFRVF*LSGLRGVQECK
Trigger: TTTACACTCCTGAACACCTCTGAGCCCACTGAGCCAAAAGACCCTGAATCGGACTCGGAGATCCAGGAGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525464.1
ENST00000529290.5
CDS CCA 72 bp CCCACAACACTCTCCTTAGCCTTTACCTCTACAGCATaGGCCACGATCCTCTTTAAGACGATGGGCTTTCTG +
Preference number: 6 (lower is better)
Translates to: PTTLSLAFTSTA*ATILFKTMGFL
Trigger: CAGAAAGCCCATCGTCTTAAAGAGGATCGTGGCCCATGCTGTAGAGGTAAAGGCTAAGGAGAGTGTTGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462902.1
ENST00000531401.5