RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDC7 (Homo sapiens)

Ensembl gene IDs: ENSG00000097046

Ensembl transcript IDs: ENST00000234626.11, ENST00000426137.1, ENST00000428239.5, ENST00000486509.1, ENST00000497611.1

Found 202 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCAACCCACCTAAGACTTAGTCAAAACAGGATACAGAGATCTGGATaGCTCTACGCAGAGGAAAAATCTCCAATAATACCGTCAATTCTG +
Preference number: 1 (lower is better)
Translates to: PTHLRLSQNRIQRSG*LYAEEKSPIIPSIL
Trigger: CAGAATTGACGGTATTATTGGAGATTTTTCCTCTGCGTAGAGCCATCCAGATCTCTGTATCCTGTTTTGACTAAGTCTTAGGTGGGTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
3UTR TCA 90 bp CCACCCACCAGACTTTTTCCCATAGGAAGTTTGATATGCTGTCATTaGTATATACCATTTCTGAATATAAACCTCTATCTTGGGTCCTTT +
Preference number: 1 (lower is better)
Translates to: PPTRLFPIGSLICCH*YIPFLNINLYLGSF
Trigger: AAAGGACCCAAGATAGAGGTTTATATTCAGAAATGGTATATATCAATGACAGCATATCAAACTTCCTATGGGAAAAAGTCTGGTGGGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
3UTR-3UTR TCA 90 bp GATACAGAGATCTGGATGGCTCTACGCAGAGGAAAAATCTCCAATAATACCGTCGCACCAGCACCAGGTTaGGTTTCCCCAAACTATACC +
Preference number: 2 (lower is better)
Translates to: DTEIWMALRRGKISNNTVAPAPG*VSPNYT
Trigger: GGTATAGTTTGGGGAAACTCAACCTGGTGCTGGTGC...GACGGTATTATTGGAGATTTTTCCTCTGCGTAGAGCCATCCAGATCTCTGTATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
3UTR-3UTR CCA 90 bp GATACAGAGATCTGGATGGCTCTACGCAGAGGAAAAATCTCCAATAATACCGTCTATCAATCTTCACCTTaGTCCTGCAGCTTCCCTTTA +
Preference number: 2 (lower is better)
Translates to: DTEIWMALRRGKISNNTVYQSSP*SCSFPL
Trigger: TAAAGGGAAGCTGCAGGACCAAGGTGAAGATTGATA...GACGGTATTATTGGAGATTTTTCCTCTGCGTAGAGCCATCCAGATCTCTGTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
3UTR-3UTR TCA 90 bp CAATCTTCACCTTGGTCCTGCAGCTTCCCTTTATCAACCAGTGTATGTATTATTGGGAAGCTAAAAATCTaGCCTAATAGGAACCCACCT +
Preference number: 2 (lower is better)
Translates to: QSSPWSCSFPLSTSVCIIGKLKI*PNRNPP
Trigger: AGGTGGGTTCCTATTAGGTCAGATTTTTAGCTTCCC...AATAATACATACACTGGTTGATAAAGGGAAGCTGCAGGACCAAGGTGAAGATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
3UTR-3UTR TCA 90 bp TGGATGAATTCAATTTTAAGTGATACTTTGCCCCATGACCAACATTTCCTCATTGCACCAGCACCAGGTTaGGTTTCCCCAAACTATACC +
Preference number: 2 (lower is better)
Translates to: WMNSILSDTLPHDQHFLIAPAPG*VSPNYT
Trigger: GGTATAGTTTGGGGAAACTCAACCTGGTGCTGGTGC...AATGAGGAAATGTTGGTCATGGGGCAAAGTATCACTTAAAATTGAATTCATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
3UTR-3UTR CCA 90 bp AAAAGAAAAGCATTTGGACTATCAATCTTCACCTTGGTCCTGCAGCTTCCCTTTCATCCAGAAACTTTGTaGTCAGCACCATGTAATTTC +
Preference number: 2 (lower is better)
Translates to: KRKAFGLSIFTLVLQLPFHPETL*SAPCNF
Trigger: GAAATTACATGGTGCTGACCACAAAGTTTCTGGATG...AAAGGGAAGCTGCAGGACCAAGGTGAAGATTGATAGTCCAAATGCTTTTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
3UTR-3UTR TCA 90 bp AAAAGAAAAGCATTTGGACTATCAATCTTCACCTTGGTCCTGCAGCTTCCCTTTTTCTGTATATGTCAGTaGAAGGTAATTAGGGAAGCT +
Preference number: 2 (lower is better)
Translates to: KRKAFGLSIFTLVLQLPFFCICQ*KVIREA
Trigger: AGCTTCCCTAATTACCTTTCACTGACATATACAGAA...AAAGGGAAGCTGCAGGACCAAGGTGAAGATTGATAGTCCAAATGCTTTTCTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
3UTR-3UTR CCA 90 bp CTCTACGCAGAGGAAAAATCTCCAATAATACCGTCAATTCTGTATTCACTTTTCTATCAATCTTCACCTTaGTCCTGCAGCTTCCCTTTA +
Preference number: 2 (lower is better)
Translates to: LYAEEKSPIIPSILYSLFYQSSP*SCSFPL
Trigger: TAAAGGGAAGCTGCAGGACCAAGGTGAAGATTGATA...GAAAAGTGAATACAGAATTGACGGTATTATTGGAGATTTTTCCTCTGCGTAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
3UTR CAA 90 bp ACCACCCACCAGACTTTTTCCCATAGGAAGTTTGATATGCTGTCATaGATATATACCATTTCTGAATATAAACCTCTATCTTGGGTCCTT +
Preference number: 2 (lower is better)
Translates to: TTHQTFSHRKFDMLS*IYTISEYKPLSWVL
Trigger: AAGGACCCAAGATAGAGGTTTATATTCAGAAATGGTATATATCAATGACAGCATATCAAACTTCCTATGGGAAAAAGTCTGGTGGGTGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
3UTR-3UTR TCA 90 bp CTCTACGCAGAGGAAAAATCTCCAATAATACCGTCAATTCTGTATTCACTTTTCTTCTGTATATGTCAGTaGAAGGTAATTAGGGAAGCT +
Preference number: 2 (lower is better)
Translates to: LYAEEKSPIIPSILYSLFFCICQ*KVIREA
Trigger: AGCTTCCCTAATTACCTTTCACTGACATATACAGAA...GAAAAGTGAATACAGAATTGACGGTATTATTGGAGATTTTTCCTCTGCGTAGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
3UTR-3UTR CCA 90 bp TTTATTTACAAAATTGTTAAGAGCACCAGCACCAGGTTGAGTTTCCCCAAACTATTATTAATCCTGCTCTaGTCTCTAAACAAGAACTTG +
Preference number: 2 (lower is better)
Translates to: FIYKIVKSTSTRLSFPKLLLILL*SLNKNL
Trigger: CAAGTTCTTGTTTAGAGACCAGAGCAGGATTAATAA...TAGTTTGGGGAAACTCAACCTGGTGCTGGTGCTCTTAACAATTTTGTAAATAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
3UTR-3UTR CCA 90 bp TGGATGAATTCAATTTTAAGTGATACTTTGCCCCATGACCAACATTTCCTCATTTTATTAATCCTGCTCTaGTCTCTAAACAAGAACTTG +
Preference number: 2 (lower is better)
Translates to: WMNSILSDTLPHDQHFLILLILL*SLNKNL
Trigger: CAAGTTCTTGTTTAGAGACCAGAGCAGGATTAATAA...AATGAGGAAATGTTGGTCATGGGGCAAAGTATCACTTAAAATTGAATTCATCCA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
3UTR CCA 72 bp CTAAGACTTAGTCAAAACAGGATACAGAGATCTGGATaGCTCTACGCAGAGGAAAAATCTCCAATAATACCG +
Preference number: 3 (lower is better)
Translates to: LRLSQNRIQRSG*LYAEEKSPIIP
Trigger: CGGTATTATTGGAGATTTTTCCTCTGCGTAGAGCCATCCAGATCTCTGTATCCTGTTTTGACTAAGTCTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
3UTR-3UTR CAA 90 bp AAACTTTGTGGTCAGCACCATGTAATTTCCGAGGAGAATGTTTTAGGTAGGGGCATTTTAAGTGATACTTaGCCCCATGACCAACATTTC +
Preference number: 3 (lower is better)
Translates to: KLCGQHHVISEENVLGRGILSDT*PHDQHF
Trigger: GAAATGTTGGTCATGGGGCAAAGTATCACTTAAAAT...GCCCCTACCTAAAACATTCTCCTCGGAAATTACATGGTGCTGACCACAAAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
3UTR-3UTR CAA 90 bp AAAAGAAAAGCATTTGGACTATCAATCTTCACCTTGGTCCTGCAGCTTCCCTTTAAACATCCAGAAACTTaGTGGTCAGCACCATGTAAT +
Preference number: 3 (lower is better)
Translates to: KRKAFGLSIFTLVLQLPFKHPET*WSAPCN
Trigger: ATTACATGGTGCTGACCACAAAGTTTCTGGATGTTT...AAAGGGAAGCTGCAGGACCAAGGTGAAGATTGATAGTCCAAATGCTTTTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
3UTR GCA 72 bp GAAAAGCATTTGGACTATCAATCTTCACCTTGGTCCTaGAGCTTCCCTTTATCAACCAGTGTATGTATTATT +
Preference number: 3 (lower is better)
Translates to: EKHLDYQSSPWS*SFPLSTSVCII
Trigger: AATAATACATACACTGGTTGATAAAGGGAAGCTGCAGGACCAAGGTGAAGATTGATAGTCCAAATGCTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
3UTR-3UTR CAA 90 bp GACCAACATTTCCTCATTGTTTTAGTGTTCATAAAAGGCCTAATATGTACCTCTTCAAAGAAGATCATGTaGTTAGTCCCAAGAACTATC +
Preference number: 3 (lower is better)
Translates to: DQHFLIVLVFIKGLICTSSKKIM*LVPRTI
Trigger: GATAGTTCTTGGGACTAACAACATGATCTTCTTTGA...AGAGGTACATATTAGGCCTTTTATGAACACTAAAACAATGAGGAAATGTTGGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
3UTR-3UTR CAA 90 bp AGTGATACTTTGCCCCATGACCAACATTTCCTCATTGTTTTAGTGTTCATAAAATCAAAGAAGATCATGTaGTTAGTCCCAAGAACTATC +
Preference number: 3 (lower is better)
Translates to: SDTLPHDQHFLIVLVFIKSKKIM*LVPRTI
Trigger: GATAGTTCTTGGGACTAACAACATGATCTTCTTTGA...TTTTATGAACACTAAAACAATGAGGAAATGTTGGTCATGGGGCAAAGTATCACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR TCA 90 bp GATACAGAGATCTGGATGGCTCTACGCAGAGGAAAAATCTCCAATAATACCGTCGCAGCTTTTCGCCACTaGCAGGAAGCGCCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: DTEIWMALRRGKISNNTVAAFRH*QEAPGG
Trigger: GCCTCCTGGCGCTTCCTGTCAGTGGCGAAAAGCTGC...GACGGTATTATTGGAGATTTTTCCTCTGCGTAGAGCCATCCAGATCTCTGTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428239.5
CDS-3UTR GCA 90 bp AAACTTTGTGGTCAGCACCATGTAATTTCCGAGGAGAATGTTTTAGGTAGGGGCCTGTGGCTCCCCAGATaGCTGGGTCGCCGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: KLCGQHHVISEENVLGRGLWLPR*LGRRLQ
Trigger: TTGGAGACGGCGACCCAGGCATCTGGGGAGCCACAG...GCCCCTACCTAAAACATTCTCCTCGGAAATTACATGGTGCTGACCACAAAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000234626.11
CDS-3UTR GCA 90 bp GATACAGAGATCTGGATGGCTCTACGCAGAGGAAAAATCTCCAATAATACCGTCGAATCCTGGTGTACCTaGCCTAGGGGCAACCTGCTG +
Preference number: 4 (lower is better)
Translates to: DTEIWMALRRGKISNNTVESWCT*PRGNLL
Trigger: CAGCAGGTTGCCCCTAGGGCAGGTACACCAGGATTC...GACGGTATTATTGGAGATTTTTCCTCTGCGTAGAGCCATCCAGATCTCTGTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CCA 90 bp GATACAGAGATCTGGATGGCTCTACGCAGAGGAAAAATCTCCAATAATACCGTCGGAGTACGACTTCTGTaGCTCCCCAGATGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: DTEIWMALRRGKISNNTVGVRLL*LPRCLG
Trigger: ACCCAGGCATCTGGGGAGCCACAGAAGTCGTACTCC...GACGGTATTATTGGAGATTTTTCCTCTGCGTAGAGCCATCCAGATCTCTGTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234626.11
CDS-3UTR CCA 90 bp AAACTTTGTGGTCAGCACCATGTAATTTCCGAGGAGAATGTTTTAGGTAGGGGCTGGTGCTCTGAATCCTaGTGTACCTGCCCTAGGGGC +
Preference number: 4 (lower is better)
Translates to: KLCGQHHVISEENVLGRGWCSES*CTCPRG
Trigger: GCCCCTAGGGCAGGTACACCAGGATTCAGAGCACCA...GCCCCTACCTAAAACATTCTCCTCGGAAATTACATGGTGCTGACCACAAAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CCA 90 bp CAATCTTCACCTTGGTCCTGCAGCTTCCCTTTATCAACCAGTGTATGTATTATTCCTGGCCACGAGTACTaGGCGGAGGAGGAGAAGGGT +
Preference number: 4 (lower is better)
Translates to: QSSPWSCSFPLSTSVCIIPGHEY*AEEEKG
Trigger: ACCCTTCTCCTCCTCCGCCCAGTACTCGTGGCCAGG...AATAATACATACACTGGTTGATAAAGGGAAGCTGCAGGACCAAGGTGAAGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428239.5
CDS-3UTR TCA 90 bp AAACTTTGTGGTCAGCACCATGTAATTTCCGAGGAGAATGTTTTAGGTAGGGGCAAGTTGACGGAGAACTaGTACGACCCTGGCCACGAG +
Preference number: 4 (lower is better)
Translates to: KLCGQHHVISEENVLGRGKLTEN*YDPGHE
Trigger: CTCGTGGCCAGGGTCGTATCAGTTCTCCGTCAACTT...GCCCCTACCTAAAACATTCTCCTCGGAAATTACATGGTGCTGACCACAAAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428239.5
CDS-3UTR TCA 90 bp AAACTTTGTGGTCAGCACCATGTAATTTCCGAGGAGAATGTTTTAGGTAGGGGCATTGGCTCATCCATCTaGATCCCCAAAGACGCCTCC +
Preference number: 4 (lower is better)
Translates to: KLCGQHHVISEENVLGRGIGSSI*IPKDAS
Trigger: GGAGGCGTCTTTGGGGATTCAGATGGATGAGCCAAT...GCCCCTACCTAAAACATTCTCCTCGGAAATTACATGGTGCTGACCACAAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR TCA 90 bp AAAAGAAAAGCATTTGGACTATCAATCTTCACCTTGGTCCTGCAGCTTCCCTTTAAAGAGCCTTCAGCCTaGAACCGGTCACGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: KRKAFGLSIFTLVLQLPFKEPSA*NRSRWG
Trigger: TCCCCAGCGTGACCGGTTTCAGGCTGAAGGCTCTTT...AAAGGGAAGCTGCAGGACCAAGGTGAAGATTGATAGTCCAAATGCTTTTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR TCA 90 bp GATACAGAGATCTGGATGGCTCTACGCAGAGGAAAAATCTCCAATAATACCGTCCTAGGGGCAACCTGCTaGCGCCTTGAAAGGCAAATA +
Preference number: 4 (lower is better)
Translates to: DTEIWMALRRGKISNNTVLGATC*RLERQI
Trigger: TATTTGCCTTTCAAGGCGTCAGCAGGTTGCCCCTAG...GACGGTATTATTGGAGATTTTTCCTCTGCGTAGAGCCATCCAGATCTCTGTATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR TCA 90 bp CAATCTTCACCTTGGTCCTGCAGCTTCCCTTTATCAACCAGTGTATGTATTATTAGACCTCTGGTGCTCTaGATCCTGGTGTACCTGCCC +
Preference number: 4 (lower is better)
Translates to: QSSPWSCSFPLSTSVCIIRPLVL*ILVYLP
Trigger: GGGCAGGTACACCAGGATTCAGAGCACCAGAGGTCT...AATAATACATACACTGGTTGATAAAGGGAAGCTGCAGGACCAAGGTGAAGATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR TCA 90 bp AAACTTTGTGGTCAGCACCATGTAATTTCCGAGGAGAATGTTTTAGGTAGGGGCGCACCAGCACCAGGTTaGGTTTCCCCAAACTATACC +
Preference number: 4 (lower is better)
Translates to: KLCGQHHVISEENVLGRGAPAPG*VSPNYT
Trigger: GGTATAGTTTGGGGAAACTCAACCTGGTGCTGGTGC...GCCCCTACCTAAAACATTCTCCTCGGAAATTACATGGTGCTGACCACAAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR TCA 90 bp CAATCTTCACCTTGGTCCTGCAGCTTCCCTTTATCAACCAGTGTATGTATTATTGAGGAGAAGGGTGAATaGATGGGAATCCGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: QSSPWSCSFPLSTSVCIIEEKGE*MGIRRP
Trigger: TGGCCGGCGGATTCCCATTCATTCACCCTTCTCCTC...AATAATACATACACTGGTTGATAAAGGGAAGCTGCAGGACCAAGGTGAAGATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428239.5
CDS-3UTR TCA 90 bp AAAAGAAAAGCATTTGGACTATCAATCTTCACCTTGGTCCTGCAGCTTCCCTTTGGAGGAGGAGAAGGGTaGATGAATGGGAATCCGCCG +
Preference number: 4 (lower is better)
Translates to: KRKAFGLSIFTLVLQLPFGGGEG*MNGNPP
Trigger: CGGCGGATTCCCATTCATTCACCCTTCTCCTCCTCC...AAAGGGAAGCTGCAGGACCAAGGTGAAGATTGATAGTCCAAATGCTTTTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428239.5
CDS-3UTR GCA 90 bp GATACAGAGATCTGGATGGCTCTACGCAGAGGAAAAATCTCCAATAATACCGTCCCCATGACATTATCTTaGCCCCCAGCCACTGTTAGG +
Preference number: 4 (lower is better)
Translates to: DTEIWMALRRGKISNNTVPMTLS*PPATVR
Trigger: CCTAACAGTGGCTGGGGGGCAAGATAATGTCATGGG...GACGGTATTATTGGAGATTTTTCCTCTGCGTAGAGCCATCCAGATCTCTGTATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR GCA 90 bp CAATCTTCACCTTGGTCCTGCAGCTTCCCTTTATCAACCAGTGTATGTATTATTGAATCCTGGTGTACCTaGCCTAGGGGCAACCTGCTG +
Preference number: 4 (lower is better)
Translates to: QSSPWSCSFPLSTSVCIIESWCT*PRGNLL
Trigger: CAGCAGGTTGCCCCTAGGGCAGGTACACCAGGATTC...AATAATACATACACTGGTTGATAAAGGGAAGCTGCAGGACCAAGGTGAAGATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CCA 90 bp CAATCTTCACCTTGGTCCTGCAGCTTCCCTTTATCAACCAGTGTATGTATTATTTGGTGCTCTGAATCCTaGTGTACCTGCCCTAGGGGC +
Preference number: 4 (lower is better)
Translates to: QSSPWSCSFPLSTSVCIIWCSES*CTCPRG
Trigger: GCCCCTAGGGCAGGTACACCAGGATTCAGAGCACCA...AATAATACATACACTGGTTGATAAAGGGAAGCTGCAGGACCAAGGTGAAGATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CCA 90 bp AAAAGAAAAGCATTTGGACTATCAATCTTCACCTTGGTCCTGCAGCTTCCCTTTAGAAGGGTGAATGAATaGGAATCCGCCGGCCAGCGC +
Preference number: 4 (lower is better)
Translates to: KRKAFGLSIFTLVLQLPFRRVNE*ESAGQR
Trigger: GCGCTGGCCGGCGGATTCCCATTCATTCACCCTTCT...AAAGGGAAGCTGCAGGACCAAGGTGAAGATTGATAGTCCAAATGCTTTTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428239.5
CDS-3UTR TCA 90 bp AAAGCATTTGGACTATCAATCTTCACCTTGGTCCTGCAGCTTCCCTTTATCAACATTGGCTCATCCATCTaGATCCCCAAAGACGCCTCC +
Preference number: 4 (lower is better)
Translates to: KAFGLSIFTLVLQLPFINIGSSI*IPKDAS
Trigger: GGAGGCGTCTTTGGGGATTCAGATGGATGAGCCAAT...GTTGATAAAGGGAAGCTGCAGGACCAAGGTGAAGATTGATAGTCCAAATGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR TCA 90 bp AAACTTTGTGGTCAGCACCATGTAATTTCCGAGGAGAATGTTTTAGGTAGGGGCGGGAAATCTGTCAGCTaGCCACCCACCAGACTTTTT +
Preference number: 4 (lower is better)
Translates to: KLCGQHHVISEENVLGRGGKSVS*PPTRLF
Trigger: AAAAAGTCTGGTGGGTGGTCAGCTGACAGATTTCCC...GCCCCTACCTAAAACATTCTCCTCGGAAATTACATGGTGCTGACCACAAAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR TCA 90 bp AAAAGAAAAGCATTTGGACTATCAATCTTCACCTTGGTCCTGCAGCTTCCCTTTAGGCCCCAAGCAAGTTaGCGGAGAACTGATACGACC +
Preference number: 4 (lower is better)
Translates to: KRKAFGLSIFTLVLQLPFRPQAS*RRTDTT
Trigger: GGTCGTATCAGTTCTCCGTCAACTTGCTTGGGGCCT...AAAGGGAAGCTGCAGGACCAAGGTGAAGATTGATAGTCCAAATGCTTTTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000428239.5
CDS-3UTR TCA 90 bp TTTATTTACAAAATTGTTAAGAGCACCAGCACCAGGTTGAGTTTCCCCAAACTAAAAGAGCCTTCAGCCTaGAACCGGTCACGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: FIYKIVKSTSTRLSFPKLKEPSA*NRSRWG
Trigger: TCCCCAGCGTGACCGGTTTCAGGCTGAAGGCTCTTT...TAGTTTGGGGAAACTCAACCTGGTGCTGGTGCTCTTAACAATTTTGTAAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR TCA 90 bp GATACAGAGATCTGGATGGCTCTACGCAGAGGAAAAATCTCCAATAATACCGTCTCTTTGACTGCTTCATaGGTTTCACTGCAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: DTEIWMALRRGKISNNTVSLTAS*VSLQGS
Trigger: AGAGCCCTGCAGTGAAACTCATGAAGCAGTCAAAGA...GACGGTATTATTGGAGATTTTTCCTCTGCGTAGAGCCATCCAGATCTCTGTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR GCA 90 bp AAACTTTGTGGTCAGCACCATGTAATTTCCGAGGAGAATGTTTTAGGTAGGGGCTCTTCACCTTGGTCCTaGAGCTTCCCTTTATCAACC +
Preference number: 4 (lower is better)
Translates to: KLCGQHHVISEENVLGRGSSPWS*SFPLST
Trigger: GGTTGATAAAGGGAAGCTGCAGGACCAAGGTGAAGA...GCCCCTACCTAAAACATTCTCCTCGGAAATTACATGGTGCTGACCACAAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CCA 90 bp GATACAGAGATCTGGATGGCTCTACGCAGAGGAAAAATCTCCAATAATACCGTCGGGAGAAAAAGCCATTaGCTCATCCATCTGAATCCC +
Preference number: 4 (lower is better)
Translates to: DTEIWMALRRGKISNNTVGRKSH*LIHLNP
Trigger: GGGATTCAGATGGATGAGCCAATGGCTTTTTCTCCC...GACGGTATTATTGGAGATTTTTCCTCTGCGTAGAGCCATCCAGATCTCTGTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CCA 90 bp AAACTTTGTGGTCAGCACCATGTAATTTCCGAGGAGAATGTTTTAGGTAGGGGCCCAAAAACAGAGCGCTaGACAGAAAGGCCTACAGAT +
Preference number: 4 (lower is better)
Translates to: KLCGQHHVISEENVLGRGPKTER*TERPTD
Trigger: ATCTGTAGGCCTTTCTGTCCAGCGCTCTGTTTTTGG...GCCCCTACCTAAAACATTCTCCTCGGAAATTACATGGTGCTGACCACAAAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CCA 90 bp AAAGCATTTGGACTATCAATCTTCACCTTGGTCCTGCAGCTTCCCTTTATCAACACAGGTCAGGCTAGCTaGGCAAGAACTGGCAGTTTT +
Preference number: 4 (lower is better)
Translates to: KAFGLSIFTLVLQLPFINTGQAS*ARTGSF
Trigger: AAAACTGCCAGTTCTTGCCCAGCTAGCCTGACCTGT...GTTGATAAAGGGAAGCTGCAGGACCAAGGTGAAGATTGATAGTCCAAATGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CCA 90 bp GATACAGAGATCTGGATGGCTCTACGCAGAGGAAAAATCTCCAATAATACCGTCCTTTGTCAAGACCTCTaGTGCTCTGAATCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: DTEIWMALRRGKISNNTVLCQDL*CSESWC
Trigger: ACACCAGGATTCAGAGCACCAGAGGTCTTGACAAAG...GACGGTATTATTGGAGATTTTTCCTCTGCGTAGAGCCATCCAGATCTCTGTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CCA 90 bp TTTATTTACAAAATTGTTAAGAGCACCAGCACCAGGTTGAGTTTCCCCAAACTAGAACTGATACGACCCTaGCCACGAGTACTGGGCGGA +
Preference number: 4 (lower is better)
Translates to: FIYKIVKSTSTRLSFPKLELIRP*PRVLGG
Trigger: TCCGCCCAGTACTCGTGGCCAGGGTCGTATCAGTTC...TAGTTTGGGGAAACTCAACCTGGTGCTGGTGCTCTTAACAATTTTGTAAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428239.5
CDS-3UTR TCA 90 bp CAATCTTCACCTTGGTCCTGCAGCTTCCCTTTATCAACCAGTGTATGTATTATTTTTGTGGTGGACTGCTaGTCCAGCTCCTTAGGTACT +
Preference number: 4 (lower is better)
Translates to: QSSPWSCSFPLSTSVCIIFVVDC*SSSLGT
Trigger: AGTACCTAAGGAGCTGGATCAGCAGTCCACCACAAA...AATAATACATACACTGGTTGATAAAGGGAAGCTGCAGGACCAAGGTGAAGATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR TCA 90 bp AAACTTTGTGGTCAGCACCATGTAATTTCCGAGGAGAATGTTTTAGGTAGGGGCAACCTGCTGACGCCTTaGAAGGCAAATACTACAAAC +
Preference number: 4 (lower is better)
Translates to: KLCGQHHVISEENVLGRGNLLTP*KANTTN
Trigger: GTTTGTAGTATTTGCCTTTCAAGGCGTCAGCAGGTT...GCCCCTACCTAAAACATTCTCCTCGGAAATTACATGGTGCTGACCACAAAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR TCA 90 bp TGGATGAATTCAATTTTAAGTGATACTTTGCCCCATGACCAACATTTCCTCATTAGACCTCTGGTGCTCTaGATCCTGGTGTACCTGCCC +
Preference number: 4 (lower is better)
Translates to: WMNSILSDTLPHDQHFLIRPLVL*ILVYLP
Trigger: GGGCAGGTACACCAGGATTCAGAGCACCAGAGGTCT...AATGAGGAAATGTTGGTCATGGGGCAAAGTATCACTTAAAATTGAATTCATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CCA 90 bp AAAAGAAAAGCATTTGGACTATCAATCTTCACCTTGGTCCTGCAGCTTCCCTTTCAGCTCCTTAGGTACTaGGCCACTCAGTGGAATCTT +
Preference number: 4 (lower is better)
Translates to: KRKAFGLSIFTLVLQLPFQLLRY*ATQWNL
Trigger: AAGATTCCACTGAGTGGCCCAGTACCTAAGGAGCTG...AAAGGGAAGCTGCAGGACCAAGGTGAAGATTGATAGTCCAAATGCTTTTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CCA 90 bp AAAAGAAAAGCATTTGGACTATCAATCTTCACCTTGGTCCTGCAGCTTCCCTTTCAGAAGCTTTTGTGGTaGACTGCTGATCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: KRKAFGLSIFTLVLQLPFQKLLW*TADPAP
Trigger: AGGAGCTGGATCAGCAGTCCACCACAAAAGCTTCTG...AAAGGGAAGCTGCAGGACCAAGGTGAAGATTGATAGTCCAAATGCTTTTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR TCA 90 bp CAATCTTCACCTTGGTCCTGCAGCTTCCCTTTATCAACCAGTGTATGTATTATTGTGGGATTTGTTTTGTaGACACCTTTCCTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: QSSPWSCSFPLSTSVCIIVGFVL*TPFLLS
Trigger: GCTCAGCAGGAAAGGTGTTCACAAAACAAATCCCAC...AATAATACATACACTGGTTGATAAAGGGAAGCTGCAGGACCAAGGTGAAGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR TCA 90 bp AAAGCATTTGGACTATCAATCTTCACCTTGGTCCTGCAGCTTCCCTTTATCAACTGCAGGGCTCTCATGTaGAATGGAGCTGTGTATATT +
Preference number: 4 (lower is better)
Translates to: KAFGLSIFTLVLQLPFINCRALM*NGAVYI
Trigger: AATATACACAGCTCCATTTCACATGAGAGCCCTGCA...GTTGATAAAGGGAAGCTGCAGGACCAAGGTGAAGATTGATAGTCCAAATGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR TCA 90 bp GATACAGAGATCTGGATGGCTCTACGCAGAGGAAAAATCTCCAATAATACCGTCTCAATTGCTGTAGTTTaGTTGGGGCACTTTGTCAAG +
Preference number: 4 (lower is better)
Translates to: DTEIWMALRRGKISNNTVSIAVV*LGHFVK
Trigger: CTTGACAAAGTGCCCCAATCAAACTACAGCAATTGA...GACGGTATTATTGGAGATTTTTCCTCTGCGTAGAGCCATCCAGATCTCTGTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR TCA 90 bp AAACTTTGTGGTCAGCACCATGTAATTTCCGAGGAGAATGTTTTAGGTAGGGGCGCAAAGAAAGAAATATaGCACCTGCAGACCACATGT +
Preference number: 4 (lower is better)
Translates to: KLCGQHHVISEENVLGRGAKKEI*HLQTTC
Trigger: ACATGTGGTCTGCAGGTGTCATATTTCTTTCTTTGC...GCCCCTACCTAAAACATTCTCCTCGGAAATTACATGGTGCTGACCACAAAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR TCA 90 bp CTCTACGCAGAGGAAAAATCTCCAATAATACCGTCAATTCTGTATTCACTTTTCGCACCAGCACCAGGTTaGGTTTCCCCAAACTATACC +
Preference number: 4 (lower is better)
Translates to: LYAEEKSPIIPSILYSLFAPAPG*VSPNYT
Trigger: GGTATAGTTTGGGGAAACTCAACCTGGTGCTGGTGC...GAAAAGTGAATACAGAATTGACGGTATTATTGGAGATTTTTCCTCTGCGTAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR GCA 90 bp CTCTACGCAGAGGAAAAATCTCCAATAATACCGTCAATTCTGTATTCACTTTTCCCCATGACATTATCTTaGCCCCCAGCCACTGTTAGG +
Preference number: 4 (lower is better)
Translates to: LYAEEKSPIIPSILYSLFPMTLS*PPATVR
Trigger: CCTAACAGTGGCTGGGGGGCAAGATAATGTCATGGG...GAAAAGTGAATACAGAATTGACGGTATTATTGGAGATTTTTCCTCTGCGTAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR GCA 90 bp AAACTTTGTGGTCAGCACCATGTAATTTCCGAGGAGAATGTTTTAGGTAGGGGCTCCAAAAACGACTCATaGTCCAGATATGGCATAGCA +
Preference number: 4 (lower is better)
Translates to: KLCGQHHVISEENVLGRGSKNDS*SRYGIA
Trigger: TGCTATGCCATATCTGGAGCATGAGTCGTTTTTGGA...GCCCCTACCTAAAACATTCTCCTCGGAAATTACATGGTGCTGACCACAAAGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CCA 90 bp CAATCTTCACCTTGGTCCTGCAGCTTCCCTTTATCAACCAGTGTATGTATTATTGGGAGAAAAAGCCATTaGCTCATCCATCTGAATCCC +
Preference number: 4 (lower is better)
Translates to: QSSPWSCSFPLSTSVCIIGRKSH*LIHLNP
Trigger: GGGATTCAGATGGATGAGCCAATGGCTTTTTCTCCC...AATAATACATACACTGGTTGATAAAGGGAAGCTGCAGGACCAAGGTGAAGATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CCA 90 bp AAAAGAAAAGCATTTGGACTATCAATCTTCACCTTGGTCCTGCAGCTTCCCTTTGTATCATGGGTTCCTTaGGCCAAACCAAAGTCTACC +
Preference number: 4 (lower is better)
Translates to: KRKAFGLSIFTLVLQLPFVSWVP*AKPKST
Trigger: GGTAGACTTTGGTTTGGCCCAAGGAACCCATGATAC...AAAGGGAAGCTGCAGGACCAAGGTGAAGATTGATAGTCCAAATGCTTTTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CCA 90 bp AAACTTTGTGGTCAGCACCATGTAATTTCCGAGGAGAATGTTTTAGGTAGGGGCTCTATTTTCGTATCATaGGTTCCTTGGGCCAAACCA +
Preference number: 4 (lower is better)
Translates to: KLCGQHHVISEENVLGRGSIFVS*VPWAKP
Trigger: TGGTTTGGCCCAAGGAACCCATGATACGAAAATAGA...GCCCCTACCTAAAACATTCTCCTCGGAAATTACATGGTGCTGACCACAAAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CCA 90 bp CAATCTTCACCTTGGTCCTGCAGCTTCCCTTTATCAACCAGTGTATGTATTATTCCAAAAACAGAGCGCTaGACAGAAAGGCCTACAGAT +
Preference number: 4 (lower is better)
Translates to: QSSPWSCSFPLSTSVCIIPKTER*TERPTD
Trigger: ATCTGTAGGCCTTTCTGTCCAGCGCTCTGTTTTTGG...AATAATACATACACTGGTTGATAAAGGGAAGCTGCAGGACCAAGGTGAAGATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CCA 90 bp GATACAGAGATCTGGATGGCTCTACGCAGAGGAAAAATCTCCAATAATACCGTCATACAGAGATCTGGATaGCTCTACGCAGAGGAAAAA +
Preference number: 4 (lower is better)
Translates to: DTEIWMALRRGKISNNTVIQRSG*LYAEEK
Trigger: TTTTTCCTCTGCGTAGAGCCATCCAGATCTCTGTAT...GACGGTATTATTGGAGATTTTTCCTCTGCGTAGAGCCATCCAGATCTCTGTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR TCA 90 bp CTCTACGCAGAGGAAAAATCTCCAATAATACCGTCAATTCTGTATTCACTTTTCTTTGTGGTGGACTGCTaGTCCAGCTCCTTAGGTACT +
Preference number: 4 (lower is better)
Translates to: LYAEEKSPIIPSILYSLFFVVDC*SSSLGT
Trigger: AGTACCTAAGGAGCTGGATCAGCAGTCCACCACAAA...GAAAAGTGAATACAGAATTGACGGTATTATTGGAGATTTTTCCTCTGCGTAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR TCA 90 bp TGGATGAATTCAATTTTAAGTGATACTTTGCCCCATGACCAACATTTCCTCATTCTAGGGGCAACCTGCTaGCGCCTTGAAAGGCAAATA +
Preference number: 4 (lower is better)
Translates to: WMNSILSDTLPHDQHFLILGATC*RLERQI
Trigger: TATTTGCCTTTCAAGGCGTCAGCAGGTTGCCCCTAG...AATGAGGAAATGTTGGTCATGGGGCAAAGTATCACTTAAAATTGAATTCATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR TCA 90 bp AAAGCATTTGGACTATCAATCTTCACCTTGGTCCTGCAGCTTCCCTTTATCAACGCAAAGAAAGAAATATaGCACCTGCAGACCACATGT +
Preference number: 4 (lower is better)
Translates to: KAFGLSIFTLVLQLPFINAKKEI*HLQTTC
Trigger: ACATGTGGTCTGCAGGTGTCATATTTCTTTCTTTGC...GTTGATAAAGGGAAGCTGCAGGACCAAGGTGAAGATTGATAGTCCAAATGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR TCA 90 bp CTCTACGCAGAGGAAAAATCTCCAATAATACCGTCAATTCTGTATTCACTTTTCGGGAAATCTGTCAGCTaGCCACCCACCAGACTTTTT +
Preference number: 4 (lower is better)
Translates to: LYAEEKSPIIPSILYSLFGKSVS*PPTRLF
Trigger: AAAAAGTCTGGTGGGTGGTCAGCTGACAGATTTCCC...GAAAAGTGAATACAGAATTGACGGTATTATTGGAGATTTTTCCTCTGCGTAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR GCA 90 bp CTCTACGCAGAGGAAAAATCTCCAATAATACCGTCAATTCTGTATTCACTTTTCTGTCAAGACCTCTGGTaGTCTGAATCCTGGTGTACC +
Preference number: 4 (lower is better)
Translates to: LYAEEKSPIIPSILYSLFCQDLW*SESWCT
Trigger: GGTACACCAGGATTCAGAGCACCAGAGGTCTTGACA...GAAAAGTGAATACAGAATTGACGGTATTATTGGAGATTTTTCCTCTGCGTAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CCA 90 bp GATACAGAGATCTGGATGGCTCTACGCAGAGGAAAAATCTCCAATAATACCGTCCTCATGCTCCAGATATaGCATAGCAATAACTACATG +
Preference number: 4 (lower is better)
Translates to: DTEIWMALRRGKISNNTVLMLQI*HSNNYM
Trigger: CATGTAGTTATTGCTATGCCATATCTGGAGCATGAG...GACGGTATTATTGGAGATTTTTCCTCTGCGTAGAGCCATCCAGATCTCTGTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CCA 90 bp AAACTTTGTGGTCAGCACCATGTAATTTCCGAGGAGAATGTTTTAGGTAGGGGCAAAGTTTTAGCAGCTTaGATAGTTTCTCTGGATCCC +
Preference number: 4 (lower is better)
Translates to: KLCGQHHVISEENVLGRGKVLAA*IVSLDP
Trigger: GGGATCCAGAGAAACTATCCAAGCTGCTAAAACTTT...GCCCCTACCTAAAACATTCTCCTCGGAAATTACATGGTGCTGACCACAAAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CCA 90 bp AAAGCATTTGGACTATCAATCTTCACCTTGGTCCTGCAGCTTCCCTTTATCAACTATCAATCTTCACCTTaGTCCTGCAGCTTCCCTTTA +
Preference number: 4 (lower is better)
Translates to: KAFGLSIFTLVLQLPFINYQSSP*SCSFPL
Trigger: TAAAGGGAAGCTGCAGGACCAAGGTGAAGATTGATA...GTTGATAAAGGGAAGCTGCAGGACCAAGGTGAAGATTGATAGTCCAAATGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CCA 90 bp CTCTACGCAGAGGAAAAATCTCCAATAATACCGTCAATTCTGTATTCACTTTTCCAGGATACAGAGATCTaGATGGCTCTACGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: LYAEEKSPIIPSILYSLFQDTEI*MALRRG
Trigger: TCCTCTGCGTAGAGCCATCCAGATCTCTGTATCCTG...GAAAAGTGAATACAGAATTGACGGTATTATTGGAGATTTTTCCTCTGCGTAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR TCA 90 bp CTCTACGCAGAGGAAAAATCTCCAATAATACCGTCAATTCTGTATTCACTTTTCGCCACTGTTAGGCACTaGAGTTCAGCTGCAATTCTT +
Preference number: 4 (lower is better)
Translates to: LYAEEKSPIIPSILYSLFATVRH*SSAAIL
Trigger: AAGAATTGCAGCTGAACTTCAGTGCCTAACAGTGGC...GAAAAGTGAATACAGAATTGACGGTATTATTGGAGATTTTTCCTCTGCGTAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR TCA 90 bp GATACAGAGATCTGGATGGCTCTACGCAGAGGAAAAATCTCCAATAATACCGTCTATTCCCGTACTTCTTaGAAGGAAAGAGAATTCAGA +
Preference number: 4 (lower is better)
Translates to: DTEIWMALRRGKISNNTVYSRTS*KEREFR
Trigger: TCTGAATTCTCTTTCCTTTCAAGAAGTACGGGAATA...GACGGTATTATTGGAGATTTTTCCTCTGCGTAGAGCCATCCAGATCTCTGTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR TCA 90 bp CAATCTTCACCTTGGTCCTGCAGCTTCCCTTTATCAACCAGTGTATGTATTATTTACATCCACAGTCTTTaGCTGCTTCATGAGTTTCAC +
Preference number: 4 (lower is better)
Translates to: QSSPWSCSFPLSTSVCIIYIHSL*LLHEFH
Trigger: GTGAAACTCATGAAGCAGTCAAAGACTGTGGATGTA...AATAATACATACACTGGTTGATAAAGGGAAGCTGCAGGACCAAGGTGAAGATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR TCA 90 bp GATACAGAGATCTGGATGGCTCTACGCAGAGGAAAAATCTCCAATAATACCGTCTTCTGTATATGTCAGTaGAAGGTAATTAGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: DTEIWMALRRGKISNNTVFCICQ*KVIREA
Trigger: AGCTTCCCTAATTACCTTTCACTGACATATACAGAA...GACGGTATTATTGGAGATTTTTCCTCTGCGTAGAGCCATCCAGATCTCTGTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR GCA 90 bp TGGATGAATTCAATTTTAAGTGATACTTTGCCCCATGACCAACATTTCCTCATTTGTCAAGACCTCTGGTaGTCTGAATCCTGGTGTACC +
Preference number: 4 (lower is better)
Translates to: WMNSILSDTLPHDQHFLICQDLW*SESWCT
Trigger: GGTACACCAGGATTCAGAGCACCAGAGGTCTTGACA...AATGAGGAAATGTTGGTCATGGGGCAAAGTATCACTTAAAATTGAATTCATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CCA 90 bp CTCTACGCAGAGGAAAAATCTCCAATAATACCGTCAATTCTGTATTCACTTTTCGTATCATGGGTTCCTTaGGCCAAACCAAAGTCTACC +
Preference number: 4 (lower is better)
Translates to: LYAEEKSPIIPSILYSLFVSWVP*AKPKST
Trigger: GGTAGACTTTGGTTTGGCCCAAGGAACCCATGATAC...GAAAAGTGAATACAGAATTGACGGTATTATTGGAGATTTTTCCTCTGCGTAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CCA 90 bp GACCAACATTTCCTCATTGTTTTAGTGTTCATAAAAGGCCTAATATGTACCTCTCAGCTCCTTAGGTACTaGGCCACTCAGTGGAATCTT +
Preference number: 4 (lower is better)
Translates to: DQHFLIVLVFIKGLICTSQLLRY*ATQWNL
Trigger: AAGATTCCACTGAGTGGCCCAGTACCTAAGGAGCTG...AGAGGTACATATTAGGCCTTTTATGAACACTAAAACAATGAGGAAATGTTGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CCA 90 bp GACCAACATTTCCTCATTGTTTTAGTGTTCATAAAAGGCCTAATATGTACCTCTACAGGTCAGGCTAGCTaGGCAAGAACTGGCAGTTTT +
Preference number: 4 (lower is better)
Translates to: DQHFLIVLVFIKGLICTSTGQAS*ARTGSF
Trigger: AAAACTGCCAGTTCTTGCCCAGCTAGCCTGACCTGT...AGAGGTACATATTAGGCCTTTTATGAACACTAAAACAATGAGGAAATGTTGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CCA 90 bp GATACAGAGATCTGGATGGCTCTACGCAGAGGAAAAATCTCCAATAATACCGTCAGGCAAGAAGCTTTATaGTCAGTCTTCTCTGAAATA +
Preference number: 4 (lower is better)
Translates to: DTEIWMALRRGKISNNTVRQEAL*SVFSEI
Trigger: TATTTCAGAGAAGACTGACCATAAAGCTTCTTGCCT...GACGGTATTATTGGAGATTTTTCCTCTGCGTAGAGCCATCCAGATCTCTGTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CCA 90 bp GATACAGAGATCTGGATGGCTCTACGCAGAGGAAAAATCTCCAATAATACCGTCTATAAACCTCTATCTTaGGTCCTTTTCTCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: DTEIWMALRRGKISNNTVYKPLS*VLFSLP
Trigger: AGGCAAAGAGAAAAGGACCCAAGATAGAGGTTTATA...GACGGTATTATTGGAGATTTTTCCTCTGCGTAGAGCCATCCAGATCTCTGTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR TCA 90 bp TGGATGAATTCAATTTTAAGTGATACTTTGCCCCATGACCAACATTTCCTCATTGCCACTGTTAGGCACTaGAGTTCAGCTGCAATTCTT +
Preference number: 4 (lower is better)
Translates to: WMNSILSDTLPHDQHFLIATVRH*SSAAIL
Trigger: AAGAATTGCAGCTGAACTTCAGTGCCTAACAGTGGC...AATGAGGAAATGTTGGTCATGGGGCAAAGTATCACTTAAAATTGAATTCATCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR TCA 90 bp GACCAACATTTCCTCATTGTTTTAGTGTTCATAAAAGGCCTAATATGTACCTCTGTGGGATTTGTTTTGTaGACACCTTTCCTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: DQHFLIVLVFIKGLICTSVGFVL*TPFLLS
Trigger: GCTCAGCAGGAAAGGTGTTCACAAAACAAATCCCAC...AGAGGTACATATTAGGCCTTTTATGAACACTAAAACAATGAGGAAATGTTGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR TCA 90 bp CTCTACGCAGAGGAAAAATCTCCAATAATACCGTCAATTCTGTATTCACTTTTCTGCAGGGCTCTCATGTaGAATGGAGCTGTGTATATT +
Preference number: 4 (lower is better)
Translates to: LYAEEKSPIIPSILYSLFCRALM*NGAVYI
Trigger: AATATACACAGCTCCATTTCACATGAGAGCCCTGCA...GAAAAGTGAATACAGAATTGACGGTATTATTGGAGATTTTTCCTCTGCGTAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR TCA 90 bp AGTGATACTTTGCCCCATGACCAACATTTCCTCATTGTTTTAGTGTTCATAAAATCTTTGACTGCTTCATaGGTTTCACTGCAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: SDTLPHDQHFLIVLVFIKSLTAS*VSLQGS
Trigger: AGAGCCCTGCAGTGAAACTCATGAAGCAGTCAAAGA...TTTTATGAACACTAAAACAATGAGGAAATGTTGGTCATGGGGCAAAGTATCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR TCA 90 bp TTTATTTACAAAATTGTTAAGAGCACCAGCACCAGGTTGAGTTTCCCCAAACTAGGGAAGCTAAAAATCTaGCCTAATAGGAACCCACCT +
Preference number: 4 (lower is better)
Translates to: FIYKIVKSTSTRLSFPKLGKLKI*PNRNPP
Trigger: AGGTGGGTTCCTATTAGGTCAGATTTTTAGCTTCCC...TAGTTTGGGGAAACTCAACCTGGTGCTGGTGCTCTTAACAATTTTGTAAATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR GCA 90 bp AGTGATACTTTGCCCCATGACCAACATTTCCTCATTGTTTTAGTGTTCATAAAATCTTCACCTTGGTCCTaGAGCTTCCCTTTATCAACC +
Preference number: 4 (lower is better)
Translates to: SDTLPHDQHFLIVLVFIKSSPWS*SFPLST
Trigger: GGTTGATAAAGGGAAGCTGCAGGACCAAGGTGAAGA...TTTTATGAACACTAAAACAATGAGGAAATGTTGGTCATGGGGCAAAGTATCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CCA 90 bp GATACAGAGATCTGGATGGCTCTACGCAGAGGAAAAATCTCCAATAATACCGTCTTTCCTGTGATTATGTaGGATTTGTTTTGTGAACAC +
Preference number: 4 (lower is better)
Translates to: DTEIWMALRRGKISNNTVFPVIM*DLFCEH
Trigger: GTGTTCACAAAACAAATCCCACATAATCACAGGAAA...GACGGTATTATTGGAGATTTTTCCTCTGCGTAGAGCCATCCAGATCTCTGTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CCA 90 bp GACCAACATTTCCTCATTGTTTTAGTGTTCATAAAAGGCCTAATATGTACCTCTCTTTGTCAAGACCTCTaGTGCTCTGAATCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: DQHFLIVLVFIKGLICTSLCQDL*CSESWC
Trigger: ACACCAGGATTCAGAGCACCAGAGGTCTTGACAAAG...AGAGGTACATATTAGGCCTTTTATGAACACTAAAACAATGAGGAAATGTTGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CCA 90 bp CAATCTTCACCTTGGTCCTGCAGCTTCCCTTTATCAACCAGTGTATGTATTATTCATCCAGAAACTTTGTaGTCAGCACCATGTAATTTC +
Preference number: 4 (lower is better)
Translates to: QSSPWSCSFPLSTSVCIIHPETL*SAPCNF
Trigger: GAAATTACATGGTGCTGACCACAAAGTTTCTGGATG...AATAATACATACACTGGTTGATAAAGGGAAGCTGCAGGACCAAGGTGAAGATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CCA 90 bp AAAGCATTTGGACTATCAATCTTCACCTTGGTCCTGCAGCTTCCCTTTATCAACTATAAACCTCTATCTTaGGTCCTTTTCTCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: KAFGLSIFTLVLQLPFINYKPLS*VLFSLP
Trigger: AGGCAAAGAGAAAAGGACCCAAGATAGAGGTTTATA...GTTGATAAAGGGAAGCTGCAGGACCAAGGTGAAGATTGATAGTCCAAATGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CCA 90 bp AAAAGAAAAGCATTTGGACTATCAATCTTCACCTTGGTCCTGCAGCTTCCCTTTTCTATGACTACTAAATaGGAAATCTGTCAGCTGACC +
Preference number: 4 (lower is better)
Translates to: KRKAFGLSIFTLVLQLPFSMTTK*EICQLT
Trigger: GGTCAGCTGACAGATTTCCCATTTAGTAGTCATAGA...AAAGGGAAGCTGCAGGACCAAGGTGAAGATTGATAGTCCAAATGCTTTTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR TCA 90 bp AAAAGAAAAGCATTTGGACTATCAATCTTCACCTTGGTCCTGCAGCTTCCCTTTTATTCCCGTACTTCTTaGAAGGAAAGAGAATTCAGA +
Preference number: 4 (lower is better)
Translates to: KRKAFGLSIFTLVLQLPFYSRTS*KEREFR
Trigger: TCTGAATTCTCTTTCCTTTCAAGAAGTACGGGAATA...AAAGGGAAGCTGCAGGACCAAGGTGAAGATTGATAGTCCAAATGCTTTTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR TCA 90 bp CTCTACGCAGAGGAAAAATCTCCAATAATACCGTCAATTCTGTATTCACTTTTCTACATCCACAGTCTTTaGCTGCTTCATGAGTTTCAC +
Preference number: 4 (lower is better)
Translates to: LYAEEKSPIIPSILYSLFYIHSL*LLHEFH
Trigger: GTGAAACTCATGAAGCAGTCAAAGACTGTGGATGTA...GAAAAGTGAATACAGAATTGACGGTATTATTGGAGATTTTTCCTCTGCGTAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR TCA 90 bp TGGATGAATTCAATTTTAAGTGATACTTTGCCCCATGACCAACATTTCCTCATTAACCTGCTGACGCCTTaGAAGGCAAATACTACAAAC +
Preference number: 4 (lower is better)
Translates to: WMNSILSDTLPHDQHFLINLLTP*KANTTN
Trigger: GTTTGTAGTATTTGCCTTTCAAGGCGTCAGCAGGTT...AATGAGGAAATGTTGGTCATGGGGCAAAGTATCACTTAAAATTGAATTCATCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR TCA 90 bp CTCTACGCAGAGGAAAAATCTCCAATAATACCGTCAATTCTGTATTCACTTTTCATGGTCAGTCTTCTCTaGAATAGCTGGTTGATGAGA +
Preference number: 4 (lower is better)
Translates to: LYAEEKSPIIPSILYSLFMVSLL*NSWLMR
Trigger: TCTCATCAACCAGCTATTTCAGAGAAGACTGACCAT...GAAAAGTGAATACAGAATTGACGGTATTATTGGAGATTTTTCCTCTGCGTAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR TCA 90 bp TGGATGAATTCAATTTTAAGTGATACTTTGCCCCATGACCAACATTTCCTCATTGGGAAGCTAAAAATCTaGCCTAATAGGAACCCACCT +
Preference number: 4 (lower is better)
Translates to: WMNSILSDTLPHDQHFLIGKLKI*PNRNPP
Trigger: AGGTGGGTTCCTATTAGGTCAGATTTTTAGCTTCCC...AATGAGGAAATGTTGGTCATGGGGCAAAGTATCACTTAAAATTGAATTCATCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR GCA 90 bp CTCTACGCAGAGGAAAAATCTCCAATAATACCGTCAATTCTGTATTCACTTTTCTCCAAAAACGACTCATaGTCCAGATATGGCATAGCA +
Preference number: 4 (lower is better)
Translates to: LYAEEKSPIIPSILYSLFSKNDS*SRYGIA
Trigger: TGCTATGCCATATCTGGAGCATGAGTCGTTTTTGGA...GAAAAGTGAATACAGAATTGACGGTATTATTGGAGATTTTTCCTCTGCGTAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CCA 90 bp AAAGCATTTGGACTATCAATCTTCACCTTGGTCCTGCAGCTTCCCTTTATCAACTTTCCTGTGATTATGTaGGATTTGTTTTGTGAACAC +
Preference number: 4 (lower is better)
Translates to: KAFGLSIFTLVLQLPFINFPVIM*DLFCEH
Trigger: GTGTTCACAAAACAAATCCCACATAATCACAGGAAA...GTTGATAAAGGGAAGCTGCAGGACCAAGGTGAAGATTGATAGTCCAAATGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CCA 90 bp CAATCTTCACCTTGGTCCTGCAGCTTCCCTTTATCAACCAGTGTATGTATTATTAGGCAAGAAGCTTTATaGTCAGTCTTCTCTGAAATA +
Preference number: 4 (lower is better)
Translates to: QSSPWSCSFPLSTSVCIIRQEAL*SVFSEI
Trigger: TATTTCAGAGAAGACTGACCATAAAGCTTCTTGCCT...AATAATACATACACTGGTTGATAAAGGGAAGCTGCAGGACCAAGGTGAAGATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CCA 90 bp AAAGCATTTGGACTATCAATCTTCACCTTGGTCCTGCAGCTTCCCTTTATCAACTTATTAATCCTGCTCTaGTCTCTAAACAAGAACTTG +
Preference number: 4 (lower is better)
Translates to: KAFGLSIFTLVLQLPFINLLILL*SLNKNL
Trigger: CAAGTTCTTGTTTAGAGACCAGAGCAGGATTAATAA...GTTGATAAAGGGAAGCTGCAGGACCAAGGTGAAGATTGATAGTCCAAATGCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR TCA 90 bp GACCAACATTTCCTCATTGTTTTAGTGTTCATAAAAGGCCTAATATGTACCTCTTCAATTGCTGTAGTTTaGTTGGGGCACTTTGTCAAG +
Preference number: 4 (lower is better)
Translates to: DQHFLIVLVFIKGLICTSSIAVV*LGHFVK
Trigger: CTTGACAAAGTGCCCCAATCAAACTACAGCAATTGA...AGAGGTACATATTAGGCCTTTTATGAACACTAAAACAATGAGGAAATGTTGGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR TCA 90 bp TGGATGAATTCAATTTTAAGTGATACTTTGCCCCATGACCAACATTTCCTCATTATGGTCAGTCTTCTCTaGAATAGCTGGTTGATGAGA +
Preference number: 4 (lower is better)
Translates to: WMNSILSDTLPHDQHFLIMVSLL*NSWLMR
Trigger: TCTCATCAACCAGCTATTTCAGAGAAGACTGACCAT...AATGAGGAAATGTTGGTCATGGGGCAAAGTATCACTTAAAATTGAATTCATCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR GCA 90 bp CTCTACGCAGAGGAAAAATCTCCAATAATACCGTCAATTCTGTATTCACTTTTCGCACTGAAGTTCAGCTaGAATTCTTATAGGATGACT +
Preference number: 4 (lower is better)
Translates to: LYAEEKSPIIPSILYSLFALKFS*NSYRMT
Trigger: AGTCATCCTATAAGAATTGCAGCTGAACTTCAGTGC...GAAAAGTGAATACAGAATTGACGGTATTATTGGAGATTTTTCCTCTGCGTAGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CCA 90 bp TTTATTTACAAAATTGTTAAGAGCACCAGCACCAGGTTGAGTTTCCCCAAACTACTCATGCTCCAGATATaGCATAGCAATAACTACATG +
Preference number: 4 (lower is better)
Translates to: FIYKIVKSTSTRLSFPKLLMLQI*HSNNYM
Trigger: CATGTAGTTATTGCTATGCCATATCTGGAGCATGAG...TAGTTTGGGGAAACTCAACCTGGTGCTGGTGCTCTTAACAATTTTGTAAATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CCA 90 bp AGTGATACTTTGCCCCATGACCAACATTTCCTCATTGTTTTAGTGTTCATAAAATCTATTTTCGTATCATaGGTTCCTTGGGCCAAACCA +
Preference number: 4 (lower is better)
Translates to: SDTLPHDQHFLIVLVFIKSIFVS*VPWAKP
Trigger: TGGTTTGGCCCAAGGAACCCATGATACGAAAATAGA...TTTTATGAACACTAAAACAATGAGGAAATGTTGGTCATGGGGCAAAGTATCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CCA 90 bp TTTATTTACAAAATTGTTAAGAGCACCAGCACCAGGTTGAGTTTCCCCAAACTACATCCAGAAACTTTGTaGTCAGCACCATGTAATTTC +
Preference number: 4 (lower is better)
Translates to: FIYKIVKSTSTRLSFPKLHPETL*SAPCNF
Trigger: GAAATTACATGGTGCTGACCACAAAGTTTCTGGATG...TAGTTTGGGGAAACTCAACCTGGTGCTGGTGCTCTTAACAATTTTGTAAATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CCA 90 bp GACCAACATTTCCTCATTGTTTTAGTGTTCATAAAAGGCCTAATATGTACCTCTTATCAATCTTCACCTTaGTCCTGCAGCTTCCCTTTA +
Preference number: 4 (lower is better)
Translates to: DQHFLIVLVFIKGLICTSYQSSP*SCSFPL
Trigger: TAAAGGGAAGCTGCAGGACCAAGGTGAAGATTGATA...AGAGGTACATATTAGGCCTTTTATGAACACTAAAACAATGAGGAAATGTTGGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CCA 90 bp TGGATGAATTCAATTTTAAGTGATACTTTGCCCCATGACCAACATTTCCTCATTATACAGAGATCTGGATaGCTCTACGCAGAGGAAAAA +
Preference number: 4 (lower is better)
Translates to: WMNSILSDTLPHDQHFLIIQRSG*LYAEEK
Trigger: TTTTTCCTCTGCGTAGAGCCATCCAGATCTCTGTAT...AATGAGGAAATGTTGGTCATGGGGCAAAGTATCACTTAAAATTGAATTCATCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
3UTR CAA 72 bp TTTATTTACAAAATTGTTAAGAGCACCAGCACCAGGTaGAGTTTCCCCAAACTATACCTAGCTCATAACTCT +
Preference number: 4 (lower is better)
Translates to: FIYKIVKSTSTR*SFPKLYLAHNS
Trigger: AGAGTTATGAGCTAGGTATAGTTTGGGGAAACTCAACCTGGTGCTGGTGCTCTTAACAATTTTGTAAATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR TCA 90 bp TGGATGAATTCAATTTTAAGTGATACTTTGCCCCATGACCAACATTTCCTCATTCCAAATAAACAGAGCTaGAAGTGCCTTCTCCAATTT +
Preference number: 4 (lower is better)
Translates to: WMNSILSDTLPHDQHFLIPNKQS*KCLLQF
Trigger: AAATTGGAGAAGGCACTTTCAGCTCTGTTTATTTGG...AATGAGGAAATGTTGGTCATGGGGCAAAGTATCACTTAAAATTGAATTCATCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR TCA 90 bp CTCTACGCAGAGGAAAAATCTCCAATAATACCGTCAATTCTGTATTCACTTTTCGCAATTCTTATAGGATaGCTTGTTGGAATCAAGTGT +
Preference number: 4 (lower is better)
Translates to: LYAEEKSPIIPSILYSLFAILIG*LVGIKC
Trigger: ACACTTGATTCCAACAAGTCATCCTATAAGAATTGC...GAAAAGTGAATACAGAATTGACGGTATTATTGGAGATTTTTCCTCTGCGTAGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR GCA 90 bp AGTGATACTTTGCCCCATGACCAACATTTCCTCATTGTTTTAGTGTTCATAAAAGCACTGAAGTTCAGCTaGAATTCTTATAGGATGACT +
Preference number: 4 (lower is better)
Translates to: SDTLPHDQHFLIVLVFIKALKFS*NSYRMT
Trigger: AGTCATCCTATAAGAATTGCAGCTGAACTTCAGTGC...TTTTATGAACACTAAAACAATGAGGAAATGTTGGTCATGGGGCAAAGTATCACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR GCA 90 bp GACCAACATTTCCTCATTGTTTTAGTGTTCATAAAAGGCCTAATATGTACCTCTAAGAAATATGACACCTaGAGACCACATGTCAATTGC +
Preference number: 4 (lower is better)
Translates to: DQHFLIVLVFIKGLICTSKKYDT*RPHVNC
Trigger: GCAATTGACATGTGGTCTGCAGGTGTCATATTTCTT...AGAGGTACATATTAGGCCTTTTATGAACACTAAAACAATGAGGAAATGTTGGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR GCA 90 bp CTCTACGCAGAGGAAAAATCTCCAATAATACCGTCAATTCTGTATTCACTTTTCTTTTCTCAAGTCTTGTaGTGGAACTTCTTTGCTACA +
Preference number: 4 (lower is better)
Translates to: LYAEEKSPIIPSILYSLFFSQVL*WNFFAT
Trigger: TGTAGCAAAGAAGTTCCAGCACAAGACTTGAGAAAA...GAAAAGTGAATACAGAATTGACGGTATTATTGGAGATTTTTCCTCTGCGTAGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CCA 90 bp TGGATGAATTCAATTTTAAGTGATACTTTGCCCCATGACCAACATTTCCTCATTAAAGTTTTAGCAGCTTaGATAGTTTCTCTGGATCCC +
Preference number: 4 (lower is better)
Translates to: WMNSILSDTLPHDQHFLIKVLAA*IVSLDP
Trigger: GGGATCCAGAGAAACTATCCAAGCTGCTAAAACTTT...AATGAGGAAATGTTGGTCATGGGGCAAAGTATCACTTAAAATTGAATTCATCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CCA 90 bp AGTGATACTTTGCCCCATGACCAACATTTCCTCATTGTTTTAGTGTTCATAAAATCTATGACTACTAAATaGGAAATCTGTCAGCTGACC +
Preference number: 4 (lower is better)
Translates to: SDTLPHDQHFLIVLVFIKSMTTK*EICQLT
Trigger: GGTCAGCTGACAGATTTCCCATTTAGTAGTCATAGA...TTTTATGAACACTAAAACAATGAGGAAATGTTGGTCATGGGGCAAAGTATCACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR TCA 90 bp GACCAACATTTCCTCATTGTTTTAGTGTTCATAAAAGGCCTAATATGTACCTCTGCAATTCTTATAGGATaGCTTGTTGGAATCAAGTGT +
Preference number: 4 (lower is better)
Translates to: DQHFLIVLVFIKGLICTSAILIG*LVGIKC
Trigger: ACACTTGATTCCAACAAGTCATCCTATAAGAATTGC...AGAGGTACATATTAGGCCTTTTATGAACACTAAAACAATGAGGAAATGTTGGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR TCA 90 bp GACCAACATTTCCTCATTGTTTTAGTGTTCATAAAAGGCCTAATATGTACCTCTTTCTGTATATGTCAGTaGAAGGTAATTAGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: DQHFLIVLVFIKGLICTSFCICQ*KVIREA
Trigger: AGCTTCCCTAATTACCTTTCACTGACATATACAGAA...AGAGGTACATATTAGGCCTTTTATGAACACTAAAACAATGAGGAAATGTTGGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR GCA 90 bp TTTATTTACAAAATTGTTAAGAGCACCAGCACCAGGTTGAGTTTCCCCAAACTAGTGCTGGAACTTCTTTaGTACATAATATTGATTTCC +
Preference number: 4 (lower is better)
Translates to: FIYKIVKSTSTRLSFPKLVLELL*YIILIS
Trigger: GGAAATCAATATTATGTAGCAAAGAAGTTCCAGCAC...TAGTTTGGGGAAACTCAACCTGGTGCTGGTGCTCTTAACAATTTTGTAAATAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR GCA 90 bp AGTGATACTTTGCCCCATGACCAACATTTCCTCATTGTTTTAGTGTTCATAAAATTTTCTCAAGTCTTGTaGTGGAACTTCTTTGCTACA +
Preference number: 4 (lower is better)
Translates to: SDTLPHDQHFLIVLVFIKFSQVL*WNFFAT
Trigger: TGTAGCAAAGAAGTTCCAGCACAAGACTTGAGAAAA...TTTTATGAACACTAAAACAATGAGGAAATGTTGGTCATGGGGCAAAGTATCACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR GCA 90 bp TGGATGAATTCAATTTTAAGTGATACTTTGCCCCATGACCAACATTTCCTCATTGTGCTGGAACTTCTTTaGTACATAATATTGATTTCC +
Preference number: 4 (lower is better)
Translates to: WMNSILSDTLPHDQHFLIVLELL*YIILIS
Trigger: GGAAATCAATATTATGTAGCAAAGAAGTTCCAGCAC...AATGAGGAAATGTTGGTCATGGGGCAAAGTATCACTTAAAATTGAATTCATCCA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS GCA 90 bp CTTGGGCACCCGCGCAGCAGCAGGCGCAGTGGGAAACGGCGAGGCTaGCAGTCCGGCACAGCCAGCGGGACCGCGTGGGGGAGGGGCCGA +
Preference number: 5 (lower is better)
Translates to: LGHPRSSRRSGKRRG*QSGTASGTAWGRGR
Trigger: TCGGCCCCTCCCCCACGCGGTCCCGCTGGCTGTGCCGGACTGGCAGCCTCGCCGTTTCCCACTGCGCCTGCTGCTGCGCGGGTGCCCAAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497611.1
CDS CCA 90 bp AGGGAGAATTTCCCGGCTTGGGCACCCGCGCAGCAGCAGGCGCAGTaGGAAACGGCGAGGCTGCCAGTCCGGCACAGCCAGCGGGACCGC +
Preference number: 5 (lower is better)
Translates to: RENFPAWAPAQQQAQ*ETARLPVRHSQRDR
Trigger: GCGGTCCCGCTGGCTGTGCCGGACTGGCAGCCTCGCCGTTTCCCACTGCGCCTGCTGCTGCGCGGGTGCCCAAGCCGGGAAATTCTCCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497611.1
CDS CCA 90 bp CTATCAGAAACACCGGCAGGGGGCTGCAGGGAGAATTTCCCGGCTTaGGCACCCGCGCAGCAGCAGGCGCAGTGGGAAACGGCGAGGCTG +
Preference number: 5 (lower is better)
Translates to: LSETPAGGCRENFPA*APAQQQAQWETARL
Trigger: CAGCCTCGCCGTTTCCCACTGCGCCTGCTGCTGCGCGGGTGCCCAAGCCGGGAAATTCTCCCTGCAGCCCCCTGCCGGTGTTTCTGATAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497611.1
CDS TCA 90 bp CTGATACGACCCTGGCCACGAGTACTGGGCGGAGGAGGAGAAGGGTaGATGAATGGGAATCCGCCGGCCAGCGCTGGCCGCGAGCTCAGC +
Preference number: 5 (lower is better)
Translates to: LIRPWPRVLGGGGEG*MNGNPPASAGRELS
Trigger: GCTGAGCTCGCGGCCAGCGCTGGCCGGCGGATTCCCATTCATTCACCCTTCTCCTCCTCCGCCCAGTACTCGTGGCCAGGGTCGTATCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426137.1
ENST00000428239.5
CDS GCA 90 bp TCCACAGGGGGAGCAAAGCAGCTATCAGAAACACCGGCAGGGGGCTaGAGGGAGAATTTCCCGGCTTGGGCACCCGCGCAGCAGCAGGCG +
Preference number: 5 (lower is better)
Translates to: STGGAKQLSETPAGG*RENFPAWAPAQQQA
Trigger: CGCCTGCTGCTGCGCGGGTGCCCAAGCCGGGAAATTCTCCCTGCAGCCCCCTGCCGGTGTTTCTGATAGCTGCTTTGCTCCCCCTGTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000497611.1
CDS TCA 90 bp GCGCCAGGAGGCTCGTCCAAGGCCCCAAGCAAGTTGACGGAGAACTaGTACGACCCTGGCCACGAGTACTGGGCGGAGGAGGAGAAGGGT +
Preference number: 5 (lower is better)
Translates to: APGGSSKAPSKLTEN*YDPGHEYWAEEEKG
Trigger: ACCCTTCTCCTCCTCCGCCCAGTACTCGTGGCCAGGGTCGTATCAGTTCTCCGTCAACTTGCTTGGGGCCTTGGACGAGCCTCCTGGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426137.1
ENST00000428239.5
ENST00000497611.1
CDS TCA 90 bp ACTGACAGGAAGCGCCAGGAGGCTCGTCCAAGGCCCCAAGCAAGTTaGCGGAGAACTGATACGACCCTGGCCACGAGTACTGGGCGGAGG +
Preference number: 5 (lower is better)
Translates to: TDRKRQEARPRPQAS*RRTDTTLATSTGRR
Trigger: CCTCCGCCCAGTACTCGTGGCCAGGGTCGTATCAGTTCTCCGTCAACTTGCTTGGGGCCTTGGACGAGCCTCCTGGCGCTTCCTGTCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426137.1
ENST00000428239.5
ENST00000497611.1
CDS GCA 90 bp AGCAAAGCAGGGTTTAAGGGAGTACGACTTCTGTGGCTCCCCAGATaGCTGGGTCGCCGTCTCCAAGAGATCCCCACCTACCGAGTCGAT +
Preference number: 5 (lower is better)
Translates to: SKAGFKGVRLLWLPR*LGRRLQEIPTYRVD
Trigger: ATCGACTCGGTAGGTGGGGATCTCTTGGAGACGGCGACCCAGGCATCTGGGGAGCCACAGAAGTCGTACTCCCTTAAACCCTGCTTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234626.11
CDS GCA 90 bp GTCAATTGCTGTAGTTTGATTGGGGCACTTTGTCAAGACCTCTGGTaGTCTGAATCCTGGTGTACCTGCCCTAGGGGCAACCTGCTGACG +
Preference number: 5 (lower is better)
Translates to: VNCCSLIGALCQDLW*SESWCTCPRGNLLT
Trigger: CGTCAGCAGGTTGCCCCTAGGGCAGGTACACCAGGATTCAGAGCACCAGAGGTCTTGACAAAGTGCCCCAATCAAACTACAGCAATTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234626.11
ENST00000428239.5
ENST00000486509.1
CDS CCA 90 bp CATGTCAATTGCTGTAGTTTGATTGGGGCACTTTGTCAAGACCTCTaGTGCTCTGAATCCTGGTGTACCTGCCCTAGGGGCAACCTGCTG +
Preference number: 5 (lower is better)
Translates to: HVNCCSLIGALCQDL*CSESWCTCPRGNLL
Trigger: CAGCAGGTTGCCCCTAGGGCAGGTACACCAGGATTCAGAGCACCAGAGGTCTTGACAAAGTGCCCCAATCAAACTACAGCAATTGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234626.11
ENST00000428239.5
ENST00000486509.1
CDS-3UTR CAA 90 bp GATACAGAGATCTGGATGGCTCTACGCAGAGGAAAAATCTCCAATAATACCGTCCGTATCATGGGTTCCTaGGGCCAAACCAAAGTCTAC +
Preference number: 5 (lower is better)
Translates to: DTEIWMALRRGKISNNTVRIMGS*GQTKVY
Trigger: GTAGACTTTGGTTTGGCCCAAGGAACCCATGATACG...GACGGTATTATTGGAGATTTTTCCTCTGCGTAGAGCCATCCAGATCTCTGTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CAA 90 bp AAAGCATTTGGACTATCAATCTTCACCTTGGTCCTGCAGCTTCCCTTTATCAACGGGGAGAAAAAGCCATaGGCTCATCCATCTGAATCC +
Preference number: 5 (lower is better)
Translates to: KAFGLSIFTLVLQLPFINGEKKP*AHPSES
Trigger: GGATTCAGATGGATGAGCCAATGGCTTTTTCTCCCC...GTTGATAAAGGGAAGCTGCAGGACCAAGGTGAAGATTGATAGTCCAAATGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CAA 90 bp AAAGCATTTGGACTATCAATCTTCACCTTGGTCCTGCAGCTTCCCTTTATCAACTTTGATTGGGGCACTTaGTCAAGACCTCTGGTGCTC +
Preference number: 5 (lower is better)
Translates to: KAFGLSIFTLVLQLPFINFDWGT*SRPLVL
Trigger: GAGCACCAGAGGTCTTGACAAAGTGCCCCAATCAAA...GTTGATAAAGGGAAGCTGCAGGACCAAGGTGAAGATTGATAGTCCAAATGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS CCA 90 bp ACTACAAACTTTATCTGTTGCATAGCAGTCACAGGTCAGGCTAGCTaGGCAAGAACTGGCAGTTTTCCTCATCACAGCACTATTCATAAC +
Preference number: 5 (lower is better)
Translates to: TTNFICCIAVTGQAS*ARTGSFPHHSTIHN
Trigger: GTTATGAATAGTGCTGTGATGAGGAAAACTGCCAGTTCTTGCCCAGCTAGCCTGACCTGTGACTGCTATGCAACAGATAAAGTTTGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234626.11
ENST00000428239.5
ENST00000486509.1
CDS-3UTR CAA 90 bp AAAAGAAAAGCATTTGGACTATCAATCTTCACCTTGGTCCTGCAGCTTCCCTTTGGGGAGAAAAAGCCATaGGCTCATCCATCTGAATCC +
Preference number: 5 (lower is better)
Translates to: KRKAFGLSIFTLVLQLPFGEKKP*AHPSES
Trigger: GGATTCAGATGGATGAGCCAATGGCTTTTTCTCCCC...AAAGGGAAGCTGCAGGACCAAGGTGAAGATTGATAGTCCAAATGCTTTTCTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CAA 90 bp GATACAGAGATCTGGATGGCTCTACGCAGAGGAAAAATCTCCAATAATACCGTCCAACCTGCTGACGCCTaGAAAGGCAAATACTACAAA +
Preference number: 5 (lower is better)
Translates to: DTEIWMALRRGKISNNTVQPADA*KGKYYK
Trigger: TTTGTAGTATTTGCCTTTCAAGGCGTCAGCAGGTTG...GACGGTATTATTGGAGATTTTTCCTCTGCGTAGAGCCATCCAGATCTCTGTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS TCA 90 bp TGGAGGTGTTTGAACGAGGCAAGAAGCTTTATGGTCAGTCTTCTCTaGAATAGCTGGTTGATGAGAAGCATGCCCTTGTATATCACTTGT +
Preference number: 5 (lower is better)
Translates to: WRCLNEARSFMVSLL*NSWLMRSMPLYITC
Trigger: ACAAGTGATATACAAGGGCATGCTTCTCATCAACCAGCTATTTCAGAGAAGACTGACCATAAAGCTTCTTGCCTCGTTCAAACACCTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS CCA 90 bp GACTGGACAAATTTAAGAAGCTCTATTTTCGTATCATGGGTTCCTTaGGCCAAACCAAAGTCTACCAAGGCATACTTTTTCAGGCGCCTA +
Preference number: 5 (lower is better)
Translates to: DWTNLRSSIFVSWVP*AKPKSTKAYFFRRL
Trigger: TAGGCGCCTGAAAAAGTATGCCTTGGTAGACTTTGGTTTGGCCCAAGGAACCCATGATACGAAAATAGAGCTTCTTAAATTTGTCCAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CAA 90 bp AAAAGAAAAGCATTTGGACTATCAATCTTCACCTTGGTCCTGCAGCTTCCCTTTCTATCAATCTTCACCTaGGTCCTGCAGCTTCCCTTT +
Preference number: 5 (lower is better)
Translates to: KRKAFGLSIFTLVLQLPFLSIFT*VLQLPF
Trigger: AAAGGGAAGCTGCAGGACCAAGGTGAAGATTGATAG...AAAGGGAAGCTGCAGGACCAAGGTGAAGATTGATAGTCCAAATGCTTTTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CAA 90 bp AAAAGAAAAGCATTTGGACTATCAATCTTCACCTTGGTCCTGCAGCTTCCCTTTTCCATCACAAGCCAATaGAGATGCAAAATGCCAGCT +
Preference number: 5 (lower is better)
Translates to: KRKAFGLSIFTLVLQLPFSITSQ*RCKMPA
Trigger: AGCTGGCATTTTGCATCTCAATTGGCTTGTGATGGA...AAAGGGAAGCTGCAGGACCAAGGTGAAGATTGATAGTCCAAATGCTTTTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CAA 90 bp AAACTTTGTGGTCAGCACCATGTAATTTCCGAGGAGAATGTTTTAGGTAGGGGCGTGATTATGTGGGATTaGTTTTGTGAACACCTTTCC +
Preference number: 5 (lower is better)
Translates to: KLCGQHHVISEENVLGRGVIMWD*FCEHLS
Trigger: GGAAAGGTGTTCACAAAACAAATCCCACATAATCAC...GCCCCTACCTAAAACATTCTCCTCGGAAATTACATGGTGCTGACCACAAAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CAA 90 bp AAAGCATTTGGACTATCAATCTTCACCTTGGTCCTGCAGCTTCCCTTTATCAACGAGTTTTCTCAAGTCTaGTGCTGGAACTTCTTTGCT +
Preference number: 5 (lower is better)
Translates to: KAFGLSIFTLVLQLPFINEFSQV*CWNFFA
Trigger: AGCAAAGAAGTTCCAGCACAAGACTTGAGAAAACTC...GTTGATAAAGGGAAGCTGCAGGACCAAGGTGAAGATTGATAGTCCAAATGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CAA 90 bp GATACAGAGATCTGGATGGCTCTACGCAGAGGAAAAATCTCCAATAATACCGTCAAACATCCAGAAACTTaGTGGTCAGCACCATGTAAT +
Preference number: 5 (lower is better)
Translates to: DTEIWMALRRGKISNNTVKHPET*WSAPCN
Trigger: ATTACATGGTGCTGACCACAAAGTTTCTGGATGTTT...GACGGTATTATTGGAGATTTTTCCTCTGCGTAGAGCCATCCAGATCTCTGTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CAA 90 bp GATACAGAGATCTGGATGGCTCTACGCAGAGGAAAAATCTCCAATAATACCGTCATATTCCCGTACTTCTaGAAAGGAAAGAGAATTCAG +
Preference number: 5 (lower is better)
Translates to: DTEIWMALRRGKISNNTVIFPYF*KGKRIQ
Trigger: CTGAATTCTCTTTCCTTTCAAGAAGTACGGGAATAT...GACGGTATTATTGGAGATTTTTCCTCTGCGTAGAGCCATCCAGATCTCTGTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CAA 90 bp TGGATGAATTCAATTTTAAGTGATACTTTGCCCCATGACCAACATTTCCTCATTCGTATCATGGGTTCCTaGGGCCAAACCAAAGTCTAC +
Preference number: 5 (lower is better)
Translates to: WMNSILSDTLPHDQHFLIRIMGS*GQTKVY
Trigger: GTAGACTTTGGTTTGGCCCAAGGAACCCATGATACG...AATGAGGAAATGTTGGTCATGGGGCAAAGTATCACTTAAAATTGAATTCATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CAA 90 bp GACCAACATTTCCTCATTGTTTTAGTGTTCATAAAAGGCCTAATATGTACCTCTTTTGATTGGGGCACTTaGTCAAGACCTCTGGTGCTC +
Preference number: 5 (lower is better)
Translates to: DQHFLIVLVFIKGLICTSFDWGT*SRPLVL
Trigger: GAGCACCAGAGGTCTTGACAAAGTGCCCCAATCAAA...AGAGGTACATATTAGGCCTTTTATGAACACTAAAACAATGAGGAAATGTTGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CAA 90 bp AAAGCATTTGGACTATCAATCTTCACCTTGGTCCTGCAGCTTCCCTTTATCAACAAAAGTTTTAGCAGCTaGGATAGTTTCTCTGGATCC +
Preference number: 5 (lower is better)
Translates to: KAFGLSIFTLVLQLPFINKSFSS*DSFSGS
Trigger: GGATCCAGAGAAACTATCCAAGCTGCTAAAACTTTT...GTTGATAAAGGGAAGCTGCAGGACCAAGGTGAAGATTGATAGTCCAAATGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CAA 90 bp AAACTTTGTGGTCAGCACCATGTAATTTCCGAGGAGAATGTTTTAGGTAGGGGCCTTCTGCTGTTATTCTaGAAGCTGGATTTAGATCTA +
Preference number: 5 (lower is better)
Translates to: KLCGQHHVISEENVLGRGLLLLF*KLDLDL
Trigger: TAGATCTAAATCCAGCTTCAAGAATAACAGCAGAAG...GCCCCTACCTAAAACATTCTCCTCGGAAATTACATGGTGCTGACCACAAAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CAA 90 bp AAACTTTGTGGTCAGCACCATGTAATTTCCGAGGAGAATGTTTTAGGTAGGGGCTCAAAGAAGATCATGTaGTTAGTCCCAAGAACTATC +
Preference number: 5 (lower is better)
Translates to: KLCGQHHVISEENVLGRGSKKIM*LVPRTI
Trigger: GATAGTTCTTGGGACTAACAACATGATCTTCTTTGA...GCCCCTACCTAAAACATTCTCCTCGGAAATTACATGGTGCTGACCACAAAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CAA 90 bp GATACAGAGATCTGGATGGCTCTACGCAGAGGAAAAATCTCCAATAATACCGTCATTTTAAGTGATACTTaGCCCCATGACCAACATTTC +
Preference number: 5 (lower is better)
Translates to: DTEIWMALRRGKISNNTVILSDT*PHDQHF
Trigger: GAAATGTTGGTCATGGGGCAAAGTATCACTTAAAAT...GACGGTATTATTGGAGATTTTTCCTCTGCGTAGAGCCATCCAGATCTCTGTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS CCA 90 bp GCAGGTCATAAGCTTCATCAGGTACCTCATTCCAGCCTTCTAAATTaGTATTATACTCATCAAAACAATGCTCACAGCTATTACTATCCC +
Preference number: 5 (lower is better)
Translates to: AGHKLHQVPHSSLLN*YYTHQNNAHSYYYP
Trigger: GGGATAGTAATAGCTGTGAGCATTGTTTTGATGAGTATAATACCAATTTAGAAGGCTGGAATGAGGTACCTGATGAAGCTTATGACCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CAA 90 bp CTCTACGCAGAGGAAAAATCTCCAATAATACCGTCAATTCTGTATTCACTTTTCCCACTCAGTGGAATCTaGTTTCCTGTGATTATGTGG +
Preference number: 5 (lower is better)
Translates to: LYAEEKSPIIPSILYSLFPLSGI*FPVIMW
Trigger: CCACATAATCACAGGAAACAAGATTCCACTGAGTGG...GAAAAGTGAATACAGAATTGACGGTATTATTGGAGATTTTTCCTCTGCGTAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CAA 90 bp TTTATTTACAAAATTGTTAAGAGCACCAGCACCAGGTTGAGTTTCCCCAAACTACCACTCAGTGGAATCTaGTTTCCTGTGATTATGTGG +
Preference number: 5 (lower is better)
Translates to: FIYKIVKSTSTRLSFPKLPLSGI*FPVIMW
Trigger: CCACATAATCACAGGAAACAAGATTCCACTGAGTGG...TAGTTTGGGGAAACTCAACCTGGTGCTGGTGCTCTTAACAATTTTGTAAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CAA 90 bp AAAGCATTTGGACTATCAATCTTCACCTTGGTCCTGCAGCTTCCCTTTATCAACATATCACTTGTTAACTaGGGAGTGCTAGAATCCATA +
Preference number: 5 (lower is better)
Translates to: KAFGLSIFTLVLQLPFINISLVN*GVLESI
Trigger: TATGGATTCTAGCACTCCCAAGTTAACAAGTGATAT...GTTGATAAAGGGAAGCTGCAGGACCAAGGTGAAGATTGATAGTCCAAATGCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CAA 90 bp AGTGATACTTTGCCCCATGACCAACATTTCCTCATTGTTTTAGTGTTCATAAAATTGTCCTGGAGGTGTTaGAACGAGGCAAGAAGCTTT +
Preference number: 5 (lower is better)
Translates to: SDTLPHDQHFLIVLVFIKLSWRC*NEARSF
Trigger: AAAGCTTCTTGCCTCGTTCAAACACCTCCAGGACAA...TTTTATGAACACTAAAACAATGAGGAAATGTTGGTCATGGGGCAAAGTATCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CAA 90 bp TGGATGAATTCAATTTTAAGTGATACTTTGCCCCATGACCAACATTTCCTCATTTTGTCCTGGAGGTGTTaGAACGAGGCAAGAAGCTTT +
Preference number: 5 (lower is better)
Translates to: WMNSILSDTLPHDQHFLILSWRC*NEARSF
Trigger: AAAGCTTCTTGCCTCGTTCAAACACCTCCAGGACAA...AATGAGGAAATGTTGGTCATGGGGCAAAGTATCACTTAAAATTGAATTCATCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CAA 90 bp TGGATGAATTCAATTTTAAGTGATACTTTGCCCCATGACCAACATTTCCTCATTCTATCAATCTTCACCTaGGTCCTGCAGCTTCCCTTT +
Preference number: 5 (lower is better)
Translates to: WMNSILSDTLPHDQHFLILSIFT*VLQLPF
Trigger: AAAGGGAAGCTGCAGGACCAAGGTGAAGATTGATAG...AATGAGGAAATGTTGGTCATGGGGCAAAGTATCACTTAAAATTGAATTCATCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CAA 90 bp TGGATGAATTCAATTTTAAGTGATACTTTGCCCCATGACCAACATTTCCTCATTTCCATCACAAGCCAATaGAGATGCAAAATGCCAGCT +
Preference number: 5 (lower is better)
Translates to: WMNSILSDTLPHDQHFLISITSQ*RCKMPA
Trigger: AGCTGGCATTTTGCATCTCAATTGGCTTGTGATGGA...AATGAGGAAATGTTGGTCATGGGGCAAAGTATCACTTAAAATTGAATTCATCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CAA 90 bp AGTGATACTTTGCCCCATGACCAACATTTCCTCATTGTTTTAGTGTTCATAAAACAACCTGCTGACGCCTaGAAAGGCAAATACTACAAA +
Preference number: 5 (lower is better)
Translates to: SDTLPHDQHFLIVLVFIKQPADA*KGKYYK
Trigger: TTTGTAGTATTTGCCTTTCAAGGCGTCAGCAGGTTG...TTTTATGAACACTAAAACAATGAGGAAATGTTGGTCATGGGGCAAAGTATCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CAA 90 bp CTCTACGCAGAGGAAAAATCTCCAATAATACCGTCAATTCTGTATTCACTTTTCGAGTTTTCTCAAGTCTaGTGCTGGAACTTCTTTGCT +
Preference number: 5 (lower is better)
Translates to: LYAEEKSPIIPSILYSLFEFSQV*CWNFFA
Trigger: AGCAAAGAAGTTCCAGCACAAGACTTGAGAAAACTC...GAAAAGTGAATACAGAATTGACGGTATTATTGGAGATTTTTCCTCTGCGTAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS TCA 90 bp CGTTTCAAAGCTTTGAACAGATTAAGCATATATTCCCGTACTTCTTaGAAGGAAAGAGAATTCAGAATGTCCAAAAACGACTCATGCTCC +
Preference number: 5 (lower is better)
Translates to: RFKALNRLSIYSRTS*KEREFRMSKNDSCS
Trigger: GGAGCATGAGTCGTTTTTGGACATTCTGAATTCTCTTTCCTTTCAAGAAGTACGGGAATATATGCTTAATCTGTTCAAAGCTTTGAAACG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CAA 90 bp CTCTACGCAGAGGAAAAATCTCCAATAATACCGTCAATTCTGTATTCACTTTTCGTGATTATGTGGGATTaGTTTTGTGAACACCTTTCC +
Preference number: 5 (lower is better)
Translates to: LYAEEKSPIIPSILYSLFVIMWD*FCEHLS
Trigger: GGAAAGGTGTTCACAAAACAAATCCCACATAATCAC...GAAAAGTGAATACAGAATTGACGGTATTATTGGAGATTTTTCCTCTGCGTAGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CAA 90 bp TTTATTTACAAAATTGTTAAGAGCACCAGCACCAGGTTGAGTTTCCCCAAACTATACAAACTTTATCTGTaGCATAGCAGTCACAGGTCA +
Preference number: 5 (lower is better)
Translates to: FIYKIVKSTSTRLSFPKLYKLYL*HSSHRS
Trigger: TGACCTGTGACTGCTATGCAACAGATAAAGTTTGTA...TAGTTTGGGGAAACTCAACCTGGTGCTGGTGCTCTTAACAATTTTGTAAATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CAA 90 bp TGGATGAATTCAATTTTAAGTGATACTTTGCCCCATGACCAACATTTCCTCATTGTCAATTGCTGTAGTTaGATTGGGGCACTTTGTCAA +
Preference number: 5 (lower is better)
Translates to: WMNSILSDTLPHDQHFLIVNCCS*IGALCQ
Trigger: TTGACAAAGTGCCCCAATCAAACTACAGCAATTGAC...AATGAGGAAATGTTGGTCATGGGGCAAAGTATCACTTAAAATTGAATTCATCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CAA 90 bp AGTGATACTTTGCCCCATGACCAACATTTCCTCATTGTTTTAGTGTTCATAAAAGTCAATTGCTGTAGTTaGATTGGGGCACTTTGTCAA +
Preference number: 5 (lower is better)
Translates to: SDTLPHDQHFLIVLVFIKVNCCS*IGALCQ
Trigger: TTGACAAAGTGCCCCAATCAAACTACAGCAATTGAC...TTTTATGAACACTAAAACAATGAGGAAATGTTGGTCATGGGGCAAAGTATCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS TCA 90 bp TCCAAAAACGACTCATGCTCCAGATATGGCATAGCAATAACTACATaGTCATTCTTCCTAAAGCAGTATTTAACTCCCATGACATTATCT +
Preference number: 5 (lower is better)
Translates to: SKNDSCSRYGIAITT*SFFLKQYLTPMTLS
Trigger: AGATAATGTCATGGGAGTTAAATACTGCTTTAGGAAGAATGATCATGTAGTTATTGCTATGCCATATCTGGAGCATGAGTCGTTTTTGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234626.11
ENST00000426137.1
ENST00000428239.5
CDS-3UTR CAA 90 bp AGTGATACTTTGCCCCATGACCAACATTTCCTCATTGTTTTAGTGTTCATAAAATACAAACTTTATCTGTaGCATAGCAGTCACAGGTCA +
Preference number: 5 (lower is better)
Translates to: SDTLPHDQHFLIVLVFIKYKLYL*HSSHRS
Trigger: TGACCTGTGACTGCTATGCAACAGATAAAGTTTGTA...TTTTATGAACACTAAAACAATGAGGAAATGTTGGTCATGGGGCAAAGTATCACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CAA 90 bp TGGATGAATTCAATTTTAAGTGATACTTTGCCCCATGACCAACATTTCCTCATTAAAAGTTTTAGCAGCTaGGATAGTTTCTCTGGATCC +
Preference number: 5 (lower is better)
Translates to: WMNSILSDTLPHDQHFLIKSFSS*DSFSGS
Trigger: GGATCCAGAGAAACTATCCAAGCTGCTAAAACTTTT...AATGAGGAAATGTTGGTCATGGGGCAAAGTATCACTTAAAATTGAATTCATCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CAA 90 bp CTCTACGCAGAGGAAAAATCTCCAATAATACCGTCAATTCTGTATTCACTTTTCATTTTAAGTGATACTTaGCCCCATGACCAACATTTC +
Preference number: 5 (lower is better)
Translates to: LYAEEKSPIIPSILYSLFILSDT*PHDQHF
Trigger: GAAATGTTGGTCATGGGGCAAAGTATCACTTAAAAT...GAAAAGTGAATACAGAATTGACGGTATTATTGGAGATTTTTCCTCTGCGTAGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CAA 90 bp TGGATGAATTCAATTTTAAGTGATACTTTGCCCCATGACCAACATTTCCTCATTATATCACTTGTTAACTaGGGAGTGCTAGAATCCATA +
Preference number: 5 (lower is better)
Translates to: WMNSILSDTLPHDQHFLIISLVN*GVLESI
Trigger: TATGGATTCTAGCACTCCCAAGTTAACAAGTGATAT...AATGAGGAAATGTTGGTCATGGGGCAAAGTATCACTTAAAATTGAATTCATCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS-3UTR CAA 90 bp TGGATGAATTCAATTTTAAGTGATACTTTGCCCCATGACCAACATTTCCTCATTCTTCTGCTGTTATTCTaGAAGCTGGATTTAGATCTA +
Preference number: 5 (lower is better)
Translates to: WMNSILSDTLPHDQHFLILLLLF*KLDLDL
Trigger: TAGATCTAAATCCAGCTTCAAGAATAACAGCAGAAG...AATGAGGAAATGTTGGTCATGGGGCAAAGTATCACTTAAAATTGAATTCATCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS GCA 72 bp CCGCGCAGCAGCAGGCGCAGTGGGAAACGGCGAGGCTaGCAGTCCGGCACAGCCAGCGGGACCGCGTGGGGG +
Preference number: 6 (lower is better)
Translates to: PRSSRRSGKRRG*QSGTASGTAWG
Trigger: CCCCCACGCGGTCCCGCTGGCTGTGCCGGACTGGCAGCCTCGCCGTTTCCCACTGCGCCTGCTGCTGCGCGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497611.1
CDS CCA 72 bp TTCCCGGCTTGGGCACCCGCGCAGCAGCAGGCGCAGTaGGAAACGGCGAGGCTGCCAGTCCGGCACAGCCAG +
Preference number: 6 (lower is better)
Translates to: FPAWAPAQQQAQ*ETARLPVRHSQ
Trigger: CTGGCTGTGCCGGACTGGCAGCCTCGCCGTTTCCCACTGCGCCTGCTGCTGCGCGGGTGCCCAAGCCGGGAA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497611.1
CDS CCA 72 bp ACACCGGCAGGGGGCTGCAGGGAGAATTTCCCGGCTTaGGCACCCGCGCAGCAGCAGGCGCAGTGGGAAACG +
Preference number: 6 (lower is better)
Translates to: TPAGGCRENFPA*APAQQQAQWET
Trigger: CGTTTCCCACTGCGCCTGCTGCTGCGCGGGTGCCCAAGCCGGGAAATTCTCCCTGCAGCCCCCTGCCGGTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497611.1
CDS TCA 72 bp CCCTGGCCACGAGTACTGGGCGGAGGAGGAGAAGGGTaGATGAATGGGAATCCGCCGGCCAGCGCTGGCCGC +
Preference number: 6 (lower is better)
Translates to: PWPRVLGGGGEG*MNGNPPASAGR
Trigger: GCGGCCAGCGCTGGCCGGCGGATTCCCATTCATTCACCCTTCTCCTCCTCCGCCCAGTACTCGTGGCCAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426137.1
ENST00000428239.5
CDS CAA 90 bp GCTATCAGAAACACCGGCAGGGGGCTGCAGGGAGAATTTCCCGGCTaGGGCACCCGCGCAGCAGCAGGCGCAGTGGGAAACGGCGAGGCT +
Preference number: 6 (lower is better)
Translates to: AIRNTGRGLQGEFPG*GTRAAAGAVGNGEA
Trigger: AGCCTCGCCGTTTCCCACTGCGCCTGCTGCTGCGCGGGTGCCCAAGCCGGGAAATTCTCCCTGCAGCCCCCTGCCGGTGTTTCTGATAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497611.1
CDS CCA 72 bp AGAAGGGTGAATGAATGGGAATCCGCCGGCCAGCGCTaGCCGCGAGCTCAGCCGGGAAGGACCGGCTTCCCT +
Preference number: 6 (lower is better)
Translates to: RRVNEWESAGQR*PRAQPGRTGFP
Trigger: AGGGAAGCCGGTCCTTCCCGGCTGAGCTCGCGGCCAGCGCTGGCCGGCGGATTCCCATTCATTCACCCTTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428239.5
CDS GCA 72 bp GGAGCAAAGCAGCTATCAGAAACACCGGCAGGGGGCTaGAGGGAGAATTTCCCGGCTTGGGCACCCGCGCAG +
Preference number: 6 (lower is better)
Translates to: GAKQLSETPAGG*RENFPAWAPAQ
Trigger: CTGCGCGGGTGCCCAAGCCGGGAAATTCTCCCTGCAGCCCCCTGCCGGTGTTTCTGATAGCTGCTTTGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497611.1
CDS TCA 72 bp GGCTCGTCCAAGGCCCCAAGCAAGTTGACGGAGAACTaGTACGACCCTGGCCACGAGTACTGGGCGGAGGAG +
Preference number: 6 (lower is better)
Translates to: GSSKAPSKLTEN*YDPGHEYWAEE
Trigger: CTCCTCCGCCCAGTACTCGTGGCCAGGGTCGTATCAGTTCTCCGTCAACTTGCTTGGGGCCTTGGACGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426137.1
ENST00000428239.5
ENST00000497611.1
CDS TCA 72 bp AAGCGCCAGGAGGCTCGTCCAAGGCCCCAAGCAAGTTaGCGGAGAACTGATACGACCCTGGCCACGAGTACT +
Preference number: 6 (lower is better)
Translates to: KRQEARPRPQAS*RRTDTTLATST
Trigger: AGTACTCGTGGCCAGGGTCGTATCAGTTCTCCGTCAACTTGCTTGGGGCCTTGGACGAGCCTCCTGGCGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426137.1
ENST00000428239.5
ENST00000497611.1
CDS CCA 72 bp GGGAGCAAAGCAGGGTTTAAGGGAGTACGACTTCTGTaGCTCCCCAGATGCCTGGGTCGCCGTCTCCAAGAG +
Preference number: 6 (lower is better)
Translates to: GSKAGFKGVRLL*LPRCLGRRLQE
Trigger: CTCTTGGAGACGGCGACCCAGGCATCTGGGGAGCCACAGAAGTCGTACTCCCTTAAACCCTGCTTTGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234626.11
CDS CCA 72 bp GGGGCACTTTGTCAAGACCTCTGGTGCTCTGAATCCTaGTGTACCTGCCCTAGGGGCAACCTGCTGACGCCT +
Preference number: 6 (lower is better)
Translates to: GALCQDLWCSES*CTCPRGNLLTP
Trigger: AGGCGTCAGCAGGTTGCCCCTAGGGCAGGTACACCAGGATTCAGAGCACCAGAGGTCTTGACAAAGTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234626.11
ENST00000428239.5
ENST00000486509.1
CDS CCA 72 bp TGCTGTAGTTTGATTGGGGCACTTTGTCAAGACCTCTaGTGCTCTGAATCCTGGTGTACCTGCCCTAGGGGC +
Preference number: 6 (lower is better)
Translates to: CCSLIGALCQDL*CSESWCTCPRG
Trigger: GCCCCTAGGGCAGGTACACCAGGATTCAGAGCACCAGAGGTCTTGACAAAGTGCCCCAATCAAACTACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234626.11
ENST00000428239.5
ENST00000486509.1
CDS GCA 72 bp TGTAGTTTGATTGGGGCACTTTGTCAAGACCTCTGGTaGTCTGAATCCTGGTGTACCTGCCCTAGGGGCAAC +
Preference number: 6 (lower is better)
Translates to: CSLIGALCQDLW*SESWCTCPRGN
Trigger: GTTGCCCCTAGGGCAGGTACACCAGGATTCAGAGCACCAGAGGTCTTGACAAAGTGCCCCAATCAAACTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234626.11
ENST00000428239.5
ENST00000486509.1
CDS CCA 72 bp TTTATCTGTTGCATAGCAGTCACAGGTCAGGCTAGCTaGGCAAGAACTGGCAGTTTTCCTCATCACAGCACT +
Preference number: 6 (lower is better)
Translates to: FICCIAVTGQAS*ARTGSFPHHST
Trigger: AGTGCTGTGATGAGGAAAACTGCCAGTTCTTGCCCAGCTAGCCTGACCTGTGACTGCTATGCAACAGATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234626.11
ENST00000428239.5
ENST00000486509.1
CDS CAA 72 bp TCCAGCTCCTTAGGTACTGGGCCACTCAGTGGAATCTaGTTTCCTGTGATTATGTGGGATTTGTTTTGTGAA +
Preference number: 6 (lower is better)
Translates to: SSSLGTGPLSGI*FPVIMWDLFCE
Trigger: TTCACAAAACAAATCCCACATAATCACAGGAAACAAGATTCCACTGAGTGGCCCAGTACCTAAGGAGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234626.11
ENST00000428239.5
ENST00000486509.1
CDS CAA 90 bp AGACTGGACAAATTTAAGAAGCTCTATTTTCGTATCATGGGTTCCTaGGGCCAAACCAAAGTCTACCAAGGCATACTTTTTCAGGCGCCT +
Preference number: 6 (lower is better)
Translates to: RLDKFKKLYFRIMGS*GQTKVYQGILFQAP
Trigger: AGGCGCCTGAAAAAGTATGCCTTGGTAGACTTTGGTTTGGCCCAAGGAACCCATGATACGAAAATAGAGCTTCTTAAATTTGTCCAGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS CAA 90 bp ATGAGTTTCACTGCAGGGCTCTCATGTGAAATGGAGCTGTGTATATaGAAATTTCTTTCTCCAAAAACAGAGCGCTGGACAGAAAGGCCT +
Preference number: 6 (lower is better)
Translates to: MSFTAGLSCEMELCI*KFLSPKTERWTERP
Trigger: AGGCCTTTCTGTCCAGCGCTCTGTTTTTGGAGAAAGAAATTTCAATATACACAGCTCCATTTCACATGAGAGCCCTGCAGTGAAACTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS TCA 72 bp TTGAACGAGGCAAGAAGCTTTATGGTCAGTCTTCTCTaGAATAGCTGGTTGATGAGAAGCATGCCCTTGTAT +
Preference number: 6 (lower is better)
Translates to: LNEARSFMVSLL*NSWLMRSMPLY
Trigger: ATACAAGGGCATGCTTCTCATCAACCAGCTATTTCAGAGAAGACTGACCATAAAGCTTCTTGCCTCGTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS CCA 72 bp GACTGGACAAATTTAAGAAGCTCTATTTTCGTATCATaGGTTCCTTGGGCCAAACCAAAGTCTACCAAGGCA +
Preference number: 6 (lower is better)
Translates to: DWTNLRSSIFVS*VPWAKPKSTKA
Trigger: TGCCTTGGTAGACTTTGGTTTGGCCCAAGGAACCCATGATACGAAAATAGAGCTTCTTAAATTTGTCCAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS CAA 72 bp ACTGCAGGGCTCTCATGTGAAATGGAGCTGTGTATATaGAAATTTCTTTCTCCAAAAACAGAGCGCTGGACA +
Preference number: 6 (lower is better)
Translates to: TAGLSCEMELCI*KFLSPKTERWT
Trigger: TGTCCAGCGCTCTGTTTTTGGAGAAAGAAATTTCAATATACACAGCTCCATTTCACATGAGAGCCCTGCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS TCA 72 bp TTAAATGAATTCCCTGAGTATTGTCCTGGAGGTGTTTaGACGAGGCAAGAAGCTTTATGGTCAGTCTTCTCT +
Preference number: 6 (lower is better)
Translates to: LNEFPEYCPGGV*TRQEALWSVFS
Trigger: AGAGAAGACTGACCATAAAGCTTCTTGCCTCGTTCAAACACCTCCAGGACAATACTCAGGGAATTCATTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS TCA 72 bp GACTCATGCTCCAGATATGGCATAGCAATAACTACATaGTCATTCTTCCTAAAGCAGTATTTAACTCCCATG +
Preference number: 6 (lower is better)
Translates to: DSCSRYGIAITT*SFFLKQYLTPM
Trigger: CATGGGAGTTAAATACTGCTTTAGGAAGAATGATCATGTAGTTATTGCTATGCCATATCTGGAGCATGAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234626.11
ENST00000426137.1
ENST00000428239.5
CDS CCA 72 bp AATTTAAGAAGCTCTATTTTCGTATCATGGGTTCCTTaGGCCAAACCAAAGTCTACCAAGGCATACTTTTTC +
Preference number: 6 (lower is better)
Translates to: NLRSSIFVSWVP*AKPKSTKAYFF
Trigger: GAAAAAGTATGCCTTGGTAGACTTTGGTTTGGCCCAAGGAACCCATGATACGAAAATAGAGCTTCTTAAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS CAA 90 bp GCGTTTCAAAGCTTTGAACAGATTAAGCATATATTCCCGTACTTCTaGAAAGGAAAGAGAATTCAGAATGTCCAAAAACGACTCATGCTC +
Preference number: 6 (lower is better)
Translates to: AFQSFEQIKHIFPYF*KGKRIQNVQKRLML
Trigger: GAGCATGAGTCGTTTTTGGACATTCTGAATTCTCTTTCCTTTCAAGAAGTACGGGAATATATGCTTAATCTGTTCAAAGCTTTGAAACGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS CCA 72 bp AAGCTTCATCAGGTACCTCATTCCAGCCTTCTAAATTaGTATTATACTCATCAAAACAATGCTCACAGCTAT +
Preference number: 6 (lower is better)
Translates to: KLHQVPHSSLLN*YYTHQNNAHSY
Trigger: ATAGCTGTGAGCATTGTTTTGATGAGTATAATACCAATTTAGAAGGCTGGAATGAGGTACCTGATGAAGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5
CDS CAA 72 bp AAATTTAAGAAGCTCTATTTTCGTATCATGGGTTCCTaGGGCCAAACCAAAGTCTACCAAGGCATACTTTTT +
Preference number: 6 (lower is better)
Translates to: KFKKLYFRIMGS*GQTKVYQGILF
Trigger: AAAAAGTATGCCTTGGTAGACTTTGGTTTGGCCCAAGGAACCCATGATACGAAAATAGAGCTTCTTAAATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234626.11
ENST00000428239.5