RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDC42SE2 (Homo sapiens)

Ensembl gene IDs: ENSG00000158985

Ensembl transcript IDs: ENST00000360515.7, ENST00000395246.5, ENST00000502582.1, ENST00000502639.1, ENST00000502840.5, ENST00000503291.5, ENST00000504701.5, ENST00000505065.2, ENST00000506419.5, ENST00000511432.5, ENST00000515533.1

Found 331 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CACACAGCACATAGCAATGTCCCTGGCCAAGAAACTGACCGTGCCTaGCTGAGCAGAATGACAACAGTACTCAGGCAAATTCCACAATGC +
Preference number: 1 (lower is better)
Translates to: HTAHSNVPGQETDRA*LSRMTTVLRQIPQC
Trigger: GCATTGTGGAATTTGCCTGAGTACTGTTGTCATTCTGCTCAGCCAGGCACGGTCAGTTTCTTGGCCAGGGACATTGCTATGTGCTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR TCA 90 bp TACTGTGCCTGTAGAGTTAGTGGCAGCTGCAGAGTAGTTATAGGCTaGCAAGTCCACTTTTGGCTTACCATGGAGATCTGCTCCAACACA +
Preference number: 1 (lower is better)
Translates to: YCACRVSGSCRVVIG*QVHFWLTMEICSNT
Trigger: TGTGTTGGAGCAGATCTCCATGGTAAGCCAAAAGTGGACTTGTCAGCCTATAACTACTCTGCAGCTGCCACTAACTCTACAGGCACAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR TCA 90 bp ACTGATGTGGCCCCTAAAATAATATGTAGAGCACAGAAAGGCCAGTaGCTCTGGAGGTCTGCAGTTAGTAGTACAGGCCAGAAGTTCAAG +
Preference number: 1 (lower is better)
Translates to: TDVAPKIICRAQKGQ*LWRSAVSSTGQKFK
Trigger: CTTGAACTTCTGGCCTGTACTACTAACTGCAGACCTCCAGAGTCACTGGCCTTTCTGTGCTCTACATATTATTTTAGGGGCCACATCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
3UTR CCA 90 bp ACATTTCCGCTCTACGCTTACTGGCACCACTTCATGCCTACATCATaGGAAAGTACCTCTTTTACAGAATGCAGATCACTGCTAACAATC +
Preference number: 1 (lower is better)
Translates to: TFPLYAYWHHFMPTS*ESTSFTECRSLLTI
Trigger: GATTGTTAGCAGTGATCTGCATTCTGTAAAAGAGGTACTTTCCCATGATGTAGGCATGAAGTGGTGCCAGTAAGCGTAGAGCGGAAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR GCA 90 bp TCTTATTTCTTGATTTTATTGGCACCTCCCAGGCACTTTGGCATGTaGTCCTGTATAAAGTGTAGTTACTGTGCCTGTAGAGTTAGTGGC +
Preference number: 1 (lower is better)
Translates to: SYFLILLAPPRHFGM*SCIKCSYCACRVSG
Trigger: GCCACTAACTCTACAGGCACAGTAACTACACTTTATACAGGAGCACATGCCAAAGTGCCTGGGAGGTGCCAATAAAATCAAGAAATAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR GCA 90 bp CACCACTTCATGCCTACATCATGGGAAAGTACCTCTTTTACAGAATaGAGATCACTGCTAACAATCCACATGACTAAGTCTTCAGTTTCC +
Preference number: 1 (lower is better)
Translates to: HHFMPTSWESTSFTE*RSLLTIHMTKSSVS
Trigger: GGAAACTGAAGACTTAGTCATGTGGATTGTTAGCAGTGATCTGCATTCTGTAAAAGAGGTACTTTCCCATGATGTAGGCATGAAGTGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR GCA 90 bp TCTGGAGGTCTGCAGTTAGTAGTACAGGCCAGAAGTTCAAGAAACTaGTACTGGAAACAACTGGATACCATAACATTAAAAAGAAGTAAA +
Preference number: 1 (lower is better)
Translates to: SGGLQLVVQARSSRN*YWKQLDTITLKRSK
Trigger: TTTACTTCTTTTTAATGTTATGGTATCCAGTTGTTTCCAGTAGCAGTTTCTTGAACTTCTGGCCTGTACTACTAACTGCAGACCTCCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
3UTR-3UTR CCA 90 bp GACTCTGGAGGTCTGCAGTTAGTAGTACAGGCCAGAAGTTCAAGAAACTGCTACTGGCCTGGCCATGTCTaGCCGTCAGGTCCAGACCCC +
Preference number: 2 (lower is better)
Translates to: DSGGLQLVVQARSSRNCYWPGHV*PSGPDP
Trigger: GGGGTCTGGACCTGACGGCCAGACATGGCCAGGCCA...GTAGCAGTTTCTTGAACTTCTGGCCTGTACTACTAACTGCAGACCTCCAGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505065.2
3UTR-3UTR GCA 90 bp GCTGACAAGTCCACTTTTGGCTTACCATGGAGATCTGCTCCAACACATGCTGGTGCATTCTCAGCTGACTaGAACCCCTGCCTCCCAGGT +
Preference number: 2 (lower is better)
Translates to: ADKSTFGLPWRSAPTHAGAFSAD*NPCLPG
Trigger: ACCTGGGAGGCAGGGGTTGCAGTCAGCTGAGAATGC...ACCAGCATGTGTTGGAGCAGATCTCCATGGTAAGCCAAAAGTGGACTTGTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505065.2
3UTR-3UTR TCA 90 bp TGGCTTACCATGGAGATCTGCTCCAACACATGCTGGTCGTTGGAGCAGCAAAAATCCAGACCCCAGCTCTaGGTACTCACTGGAGAAAGG +
Preference number: 2 (lower is better)
Translates to: WLTMEICSNTCWSLEQQKSRPQL*VLTGER
Trigger: CCTTTCTCCAGTGAGTACTCAGAGCTGGGGTCTGGA...TTTTTGCTGCTCCAACGACCAGCATGTGTTGGAGCAGATCTCCATGGTAAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505065.2
3UTR-3UTR TCA 90 bp CTGAGCAGAATGACAACAGTACTCAGGCAAATTCCACAATGCAACATCCACTTGTGGCGCATTCTCAGCTaGCTGCAACCCCTGCCTCCC +
Preference number: 2 (lower is better)
Translates to: LSRMTTVLRQIPQCNIHLWRILS*LQPLPP
Trigger: GGGAGGCAGGGGTTGCAGTCAGCTGAGAATGCGCCA...CAAGTGGATGTTGCATTGTGGAATTTGCCTGAGTACTGTTGTCATTCTGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505065.2
3UTR-3UTR TCA 90 bp TGGCTTACCATGGAGATCTGCTCCAACACATGCTGGTCGTTGGAGCAGCAAAAAGAGAACACAAACCACTaGCTCTGGCTTAACACCACA +
Preference number: 2 (lower is better)
Translates to: WLTMEICSNTCWSLEQQKENTNH*LWLNTT
Trigger: TGTGGTGTTAAGCCAGAGTCAGTGGTTTGTGTTCTC...TTTTTGCTGCTCCAACGACCAGCATGTGTTGGAGCAGATCTCCATGGTAAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR-3UTR GCA 90 bp GCTGACAAGTCCACTTTTGGCTTACCATGGAGATCTGCTCCAACACATGCTGGTGGTCGGTATGTATGTTaGTCTTGGCAACTGATGTGG +
Preference number: 2 (lower is better)
Translates to: ADKSTFGLPWRSAPTHAGGRYVC*SWQLMW
Trigger: CCACATCAGTTGCCAAGAGCAACATACATACCGACC...ACCAGCATGTGTTGGAGCAGATCTCCATGGTAAGCCAAAAGTGGACTTGTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR-3UTR GCA 90 bp TGGCTTACCATGGAGATCTGCTCCAACACATGCTGGTCGTTGGAGCAGCAAAAAGGTCGGTATGTATGTTaGTCTTGGCAACTGATGTGG +
Preference number: 2 (lower is better)
Translates to: WLTMEICSNTCWSLEQQKGRYVC*SWQLMW
Trigger: CCACATCAGTTGCCAAGAGCAACATACATACCGACC...TTTTTGCTGCTCCAACGACCAGCATGTGTTGGAGCAGATCTCCATGGTAAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR-3UTR TCA 90 bp GACTCTGGAGGTCTGCAGTTAGTAGTACAGGCCAGAAGTTCAAGAAACTGCTACAATGCAGGATTCGTCTaGCAGTATCTTCTTCAGAGC +
Preference number: 2 (lower is better)
Translates to: DSGGLQLVVQARSSRNCYNAGFV*QYLLQS
Trigger: GCTCTGAAGAAGATACTGTCAGACGAATCCTGCATT...GTAGCAGTTTCTTGAACTTCTGGCCTGTACTACTAACTGCAGACCTCCAGAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
3UTR-3UTR TCA 90 bp CATAACCACACCTGTAACCACACCTGTTTACAACCACAGGTCCTTGCTCTCAAAGAGAACACAAACCACTaGCTCTGGCTTAACACCACA +
Preference number: 2 (lower is better)
Translates to: HNHTCNHTCLQPQVLALKENTNH*LWLNTT
Trigger: TGTGGTGTTAAGCCAGAGTCAGTGGTTTGTGTTCTC...TTTGAGAGCAAGGACCTGTGGTTGTAAACAGGTGTGGTTACAGGTGTGGTTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
3UTR-3UTR GCA 90 bp CATAACCACACCTGTAACCACACCTGTTTACAACCACAGGTCCTTGCTCTCAAAACAGGGTGGACAAGGTaGCATCACACTTTGGAGAAA +
Preference number: 2 (lower is better)
Translates to: HNHTCNHTCLQPQVLALKTGWTR*HHTLEK
Trigger: TTTCTCCAAAGTGTGATGGCACCTTGTCCACCCTGT...TTTGAGAGCAAGGACCTGTGGTTGTAAACAGGTGTGGTTACAGGTGTGGTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
3UTR-3UTR GCA 90 bp CATAACCACACCTGTAACCACACCTGTTTACAACCACAGGTCCTTGCTCTCAAAGGTCGGTATGTATGTTaGTCTTGGCAACTGATGTGG +
Preference number: 2 (lower is better)
Translates to: HNHTCNHTCLQPQVLALKGRYVC*SWQLMW
Trigger: CCACATCAGTTGCCAAGAGCAACATACATACCGACC...TTTGAGAGCAAGGACCTGTGGTTGTAAACAGGTGTGGTTACAGGTGTGGTTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
3UTR-3UTR GCA 90 bp CATAACCACACCTGTAACCACACCTGTTTACAACCACAGGTCCTTGCTCTCAAAGATCAAGTAATCTGGTaGCCCGCTGTACTGGGTAAA +
Preference number: 2 (lower is better)
Translates to: HNHTCNHTCLQPQVLALKDQVIW*PAVLGK
Trigger: TTTACCCAGTACAGCGGGGCACCAGATTACTTGATC...TTTGAGAGCAAGGACCTGTGGTTGTAAACAGGTGTGGTTACAGGTGTGGTTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR-3UTR GCA 90 bp CTGAGCAGAATGACAACAGTACTCAGGCAAATTCCACAATGCAACATCCACTTGCTTACCATGGAGATCTaGTCCAACACATGCTGGTCG +
Preference number: 2 (lower is better)
Translates to: LSRMTTVLRQIPQCNIHLLTMEI*SNTCWS
Trigger: CGACCAGCATGTGTTGGAGCAGATCTCCATGGTAAG...CAAGTGGATGTTGCATTGTGGAATTTGCCTGAGTACTGTTGTCATTCTGCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR-3UTR CCA 90 bp AACCTGAGCAAAGGCTTCGTACAGGTTGTTTTCACTGGCAATAATTCAGCCAGGGAAGATGCTCAGGATTaGACTGGAGGAGAGTATGAC +
Preference number: 2 (lower is better)
Translates to: NLSKGFVQVVFTGNNSAREDAQD*TGGEYD
Trigger: GTCATACTCTCCTCCAGTCCAATCCTGAGCATCTTC...CCTGGCTGAATTATTGCCAGTGAAAACAACCTGTACGAAGCCTTTGCTCAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
3UTR-3UTR TCA 90 bp ACACAAACCACTGACTCTGGCTTAACACCACACTCTAACAGAAAAGAAGAAACCGACTGGAGGAGAGTATaGCCGCAACACTCAGATACA +
Preference number: 2 (lower is better)
Translates to: TQTTDSGLTPHSNRKEETDWRRV*PQHSDT
Trigger: TGTATCTGAGTGTTGCGGTCATACTCTCCTCCAGTC...GGTTTCTTCTTTTCTGTTAGAGTGTGGTGTTAAGCCAGAGTCAGTGGTTTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
3UTR-3UTR TCA 90 bp GTTGTTTTCACTGGCAATAATTCAGCCAGGTCGGTATGTATGTTGCTCTTGGCACTCTGTGCTTGGGATTaGCACAAAGGCTCAAAACTG +
Preference number: 2 (lower is better)
Translates to: VVFTGNNSARSVCMLLLALCAWD*HKGSKL
Trigger: CAGTTTTGAGCCTTTGTGTCAATCCCAAGCACAGAG...TGCCAAGAGCAACATACATACCGACCTGGCTGAATTATTGCCAGTGAAAACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR-3UTR TCA 90 bp TGGCTTACCATGGAGATCTGCTCCAACACATGCTGGTCGTTGGAGCAGCAAAAAGAACAAATGACCTCTTaGGATTTACAACCCCCTTTA +
Preference number: 2 (lower is better)
Translates to: WLTMEICSNTCWSLEQQKEQMTS*DLQPPL
Trigger: TAAAGGGGGTTGTAAATCTCAAGAGGTCATTTGTTC...TTTTTGCTGCTCCAACGACCAGCATGTGTTGGAGCAGATCTCCATGGTAAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR-3UTR GCA 90 bp GTTGTTTTCACTGGCAATAATTCAGCCAGGTCGGTATGTATGTTGCTCTTGGCAGATCAAGTAATCTGGTaGCCCGCTGTACTGGGTAAA +
Preference number: 2 (lower is better)
Translates to: VVFTGNNSARSVCMLLLADQVIW*PAVLGK
Trigger: TTTACCCAGTACAGCGGGGCACCAGATTACTTGATC...TGCCAAGAGCAACATACATACCGACCTGGCTGAATTATTGCCAGTGAAAACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR-3UTR GCA 90 bp CTGAGCAGAATGACAACAGTACTCAGGCAAATTCCACAATGCAACATCCACTTGGATCAAGTAATCTGGTaGCCCGCTGTACTGGGTAAA +
Preference number: 2 (lower is better)
Translates to: LSRMTTVLRQIPQCNIHLDQVIW*PAVLGK
Trigger: TTTACCCAGTACAGCGGGGCACCAGATTACTTGATC...CAAGTGGATGTTGCATTGTGGAATTTGCCTGAGTACTGTTGTCATTCTGCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR-3UTR GCA 90 bp GTTTTCTTATTTCTTGATTTTATTGGCACCTCCCAGGCACTTTGGCATGTGCTCATCTGCTCCAACACATaGTGGTCGTTGGAGCAGCAA +
Preference number: 2 (lower is better)
Translates to: VFLFLDFIGTSQALWHVLICSNT*WSLEQQ
Trigger: TTGCTGCTCCAACGACCAGCATGTGTTGGAGCAGAT...GAGCACATGCCAAAGTGCCTGGGAGGTGCCAATAAAATCAAGAAATAAGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR-3UTR GCA 90 bp GTTTTCTTATTTCTTGATTTTATTGGCACCTCCCAGGCACTTTGGCATGTGCTCAGGTGTGAGCCACCATaGTCGGCCTCAATACTCAAA +
Preference number: 2 (lower is better)
Translates to: VFLFLDFIGTSQALWHVLRCEPP*SASILK
Trigger: TTTGAGTATTGAGGCCGAGCATGGTGGCTCACACCT...GAGCACATGCCAAAGTGCCTGGGAGGTGCCAATAAAATCAAGAAATAAGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505065.2
3UTR-3UTR CCA 90 bp GTTGTTTTCACTGGCAATAATTCAGCCAGGTCGGTATGTATGTTGCTCTTGGCAATAATCACGACAGGGTaGACAAGGTGCCATCACACT +
Preference number: 2 (lower is better)
Translates to: VVFTGNNSARSVCMLLLAIITTG*TRCHHT
Trigger: AGTGTGATGGCACCTTGTCCACCCTGTCGTGATTAT...TGCCAAGAGCAACATACATACCGACCTGGCTGAATTATTGCCAGTGAAAACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
3UTR-3UTR CCA 90 bp AACCTGAGCAAAGGCTTCGTACAGGTTGTTTTCACTGGCAATAATTCAGCCAGGTATGTATGTTGCTCTTaGCAACTGATGTGGCCCCTA +
Preference number: 2 (lower is better)
Translates to: NLSKGFVQVVFTGNNSARYVCCS*QLMWPL
Trigger: TAGGGGCCACATCAGTTGCCAAGAGCAACATACATA...CCTGGCTGAATTATTGCCAGTGAAAACAACCTGTACGAAGCCTTTGCTCAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
3UTR-3UTR CCA 90 bp GCCTACATCATGGGAAAGTACCTCTTTTACAGAATGCAGATCACTGCTAACAATCCGCTCTACGCTTACTaGCACCACTTCATGCCTACA +
Preference number: 2 (lower is better)
Translates to: AYIMGKYLFYRMQITANNPLYAY*HHFMPT
Trigger: TGTAGGCATGAAGTGGTGCCAGTAAGCGTAGAGCGG...ATTGTTAGCAGTGATCTGCATTCTGTAAAAGAGGTACTTTCCCATGATGTAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR-3UTR TCA 90 bp CATAACCACACCTGTAACCACACCTGTTTACAACCACAGGTCCTTGCTCTCAAAACATATTTTAGAACCTaGGCAAAGGCTTCGTACAGG +
Preference number: 2 (lower is better)
Translates to: HNHTCNHTCLQPQVLALKTYFRT*AKASYR
Trigger: CCTGTACGAAGCCTTTGCTCAGGTTCTAAAATATGT...TTTGAGAGCAAGGACCTGTGGTTGTAAACAGGTGTGGTTACAGGTGTGGTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
3UTR-3UTR GCA 90 bp GCCTACATCATGGGAAAGTACCTCTTTTACAGAATGCAGATCACTGCTAACAATTTCAAGCAATTCTCGTaGCTCAGCCTCCTGAGTAGC +
Preference number: 2 (lower is better)
Translates to: AYIMGKYLFYRMQITANNFKQFS*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCACGAGAATTGCTTGAA...ATTGTTAGCAGTGATCTGCATTCTGTAAAAGAGGTACTTTCCCATGATGTAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505065.2
3UTR-3UTR CCA 90 bp AATGTCTACTCCGAAGATGCAAATGTTTTTCCTTGGCAGATCCTCTCTGTGCTTATAATCACGACAGGGTaGACAAGGTGCCATCACACT +
Preference number: 2 (lower is better)
Translates to: NVYSEDANVFPWQILSVLIITTG*TRCHHT
Trigger: AGTGTGATGGCACCTTGTCCACCCTGTCGTGATTAT...AAGCACAGAGAGGATCTGCCAAGGAAAAACATTTGCATCTTCGGAGTAGACATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR-3UTR CCA 90 bp ACACAAACCACTGACTCTGGCTTAACACCACACTCTAACAGAAAAGAAGAAACCATAATCACGACAGGGTaGACAAGGTGCCATCACACT +
Preference number: 2 (lower is better)
Translates to: TQTTDSGLTPHSNRKEETIITTG*TRCHHT
Trigger: AGTGTGATGGCACCTTGTCCACCCTGTCGTGATTAT...GGTTTCTTCTTTTCTGTTAGAGTGTGGTGTTAAGCCAGAGTCAGTGGTTTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
3UTR-3UTR CCA 90 bp GACTCTGGAGGTCTGCAGTTAGTAGTACAGGCCAGAAGTTCAAGAAACTGCTACAGAAATGTTAATTTCTaGCATCCCATGGGCTCTTAC +
Preference number: 2 (lower is better)
Translates to: DSGGLQLVVQARSSRNCYRNVNF*HPMGSY
Trigger: GTAAGAGCCCATGGGATGCCAGAAATTAACATTTCT...GTAGCAGTTTCTTGAACTTCTGGCCTGTACTACTAACTGCAGACCTCCAGAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
3UTR-3UTR CCA 90 bp GCTGACAAGTCCACTTTTGGCTTACCATGGAGATCTGCTCCAACACATGCTGGTTCAAGAAACTGCTACTaGAAACAACTGGATACCATA +
Preference number: 2 (lower is better)
Translates to: ADKSTFGLPWRSAPTHAGSRNCY*KQLDTI
Trigger: TATGGTATCCAGTTGTTTCCAGTAGCAGTTTCTTGA...ACCAGCATGTGTTGGAGCAGATCTCCATGGTAAGCCAAAAGTGGACTTGTCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR-3UTR CCA 90 bp CTGAGCAGAATGACAACAGTACTCAGGCAAATTCCACAATGCAACATCCACTTGTATGTATGTTGCTCTTaGCAACTGATGTGGCCCCTA +
Preference number: 2 (lower is better)
Translates to: LSRMTTVLRQIPQCNIHLYVCCS*QLMWPL
Trigger: TAGGGGCCACATCAGTTGCCAAGAGCAACATACATA...CAAGTGGATGTTGCATTGTGGAATTTGCCTGAGTACTGTTGTCATTCTGCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR-3UTR CCA 90 bp AATGTCTACTCCGAAGATGCAAATGTTTTTCCTTGGCAGATCCTCTCTGTGCTTAAAGATCAAGTAATCTaGTGCCCCGCTGTACTGGGT +
Preference number: 2 (lower is better)
Translates to: NVYSEDANVFPWQILSVLKDQVI*CPAVLG
Trigger: ACCCAGTACAGCGGGGCACCAGATTACTTGATCTTT...AAGCACAGAGAGGATCTGCCAAGGAAAAACATTTGCATCTTCGGAGTAGACATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR-3UTR CCA 90 bp ACAAATGACCTCTTGAGATTTACAACCCCCTTTATAAAAGTGGGAAAGCTGCCTGAAACTGACCGTGCCTaGCTGAGCAGAATGACAACA +
Preference number: 2 (lower is better)
Translates to: TNDLLRFTTPFIKVGKLPETDRA*LSRMTT
Trigger: TGTTGTCATTCTGCTCAGCCAGGCACGGTCAGTTTC...AGGCAGCTTTCCCACTTTTATAAAGGGGGTTGTAAATCTCAAGAGGTCATTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR-3UTR CCA 90 bp TGGCTTACCATGGAGATCTGCTCCAACACATGCTGGTCGTTGGAGCAGCAAAAATTCATGCCTACATCATaGGAAAGTACCTCTTTTACA +
Preference number: 2 (lower is better)
Translates to: WLTMEICSNTCWSLEQQKFMPTS*ESTSFT
Trigger: TGTAAAAGAGGTACTTTCCCATGATGTAGGCATGAA...TTTTTGCTGCTCCAACGACCAGCATGTGTTGGAGCAGATCTCCATGGTAAGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR-3UTR CCA 90 bp CAAACCACTGACTCTGGCTTAACACCACACTCTAACAGAAAAGAAGAAACCTTTTTACTATTATTGGCCTaGCCATGTCTGGCCGTCAGG +
Preference number: 2 (lower is better)
Translates to: QTTDSGLTPHSNRKEETFLLLLA*PCLAVR
Trigger: CCTGACGGCCAGACATGGCCAGGCCAATAATAGTAA...AAAGGTTTCTTCTTTTCTGTTAGAGTGTGGTGTTAAGCCAGAGTCAGTGGTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505065.2
3UTR-3UTR GCA 90 bp CAAACCACTGACTCTGGCTTAACACCACACTCTAACAGAAAAGAAGAAACCTTTACAGGGTGGACAAGGTaGCATCACACTTTGGAGAAA +
Preference number: 2 (lower is better)
Translates to: QTTDSGLTPHSNRKEETFTGWTR*HHTLEK
Trigger: TTTCTCCAAAGTGTGATGGCACCTTGTCCACCCTGT...AAAGGTTTCTTCTTTTCTGTTAGAGTGTGGTGTTAAGCCAGAGTCAGTGGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
3UTR-3UTR GCA 90 bp CAAACCACTGACTCTGGCTTAACACCACACTCTAACAGAAAAGAAGAAACCTTTGGTCGGTATGTATGTTaGTCTTGGCAACTGATGTGG +
Preference number: 2 (lower is better)
Translates to: QTTDSGLTPHSNRKEETFGRYVC*SWQLMW
Trigger: CCACATCAGTTGCCAAGAGCAACATACATACCGACC...AAAGGTTTCTTCTTTTCTGTTAGAGTGTGGTGTTAAGCCAGAGTCAGTGGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
3UTR-3UTR GCA 90 bp CTGAGCAGAATGACAACAGTACTCAGGCAAATTCCACAATGCAACATCCACTTGAGGCACTTTGGCATGTaGTCCTGTATAAAGTGTAGT +
Preference number: 2 (lower is better)
Translates to: LSRMTTVLRQIPQCNIHLRHFGM*SCIKCS
Trigger: ACTACACTTTATACAGGAGCACATGCCAAAGTGCCT...CAAGTGGATGTTGCATTGTGGAATTTGCCTGAGTACTGTTGTCATTCTGCTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR-3UTR CCA 90 bp ACCACTGACTCTGGCTTAACACCACACTCTAACAGAAAAGAAGAAACCTTTACAGAAGATGCTCAGGATTaGACTGGAGGAGAGTATGAC +
Preference number: 2 (lower is better)
Translates to: TTDSGLTPHSNRKEETFTEDAQD*TGGEYD
Trigger: GTCATACTCTCCTCCAGTCCAATCCTGAGCATCTTC...TGTAAAGGTTTCTTCTTTTCTGTTAGAGTGTGGTGTTAAGCCAGAGTCAGTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
3UTR-3UTR CCA 90 bp CAAACCACTGACTCTGGCTTAACACCACACTCTAACAGAAAAGAAGAAACCTTTGAAGATGCTCAGGATTaGACTGGAGGAGAGTATGAC +
Preference number: 2 (lower is better)
Translates to: QTTDSGLTPHSNRKEETFEDAQD*TGGEYD
Trigger: GTCATACTCTCCTCCAGTCCAATCCTGAGCATCTTC...AAAGGTTTCTTCTTTTCTGTTAGAGTGTGGTGTTAAGCCAGAGTCAGTGGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
3UTR-3UTR CCA 90 bp ACAAATGACCTCTTGAGATTTACAACCCCCTTTATAAAAGTGGGAAAGCTGCCTGAAGATGCTCAGGATTaGACTGGAGGAGAGTATGAC +
Preference number: 2 (lower is better)
Translates to: TNDLLRFTTPFIKVGKLPEDAQD*TGGEYD
Trigger: GTCATACTCTCCTCCAGTCCAATCCTGAGCATCTTC...AGGCAGCTTTCCCACTTTTATAAAGGGGGTTGTAAATCTCAAGAGGTCATTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR-3UTR CCA 90 bp ACAAATGACCTCTTGAGATTTACAACCCCCTTTATAAAAGTGGGAAAGCTGCCTTGCTCCAACACATGCTaGTCGTTGGAGCAGCAAAAA +
Preference number: 2 (lower is better)
Translates to: TNDLLRFTTPFIKVGKLPCSNTC*SLEQQK
Trigger: TTTTTGCTGCTCCAACGACCAGCATGTGTTGGAGCA...AGGCAGCTTTCCCACTTTTATAAAGGGGGTTGTAAATCTCAAGAGGTCATTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR-3UTR CCA 90 bp ACAAATGACCTCTTGAGATTTACAACCCCCTTTATAAAAGTGGGAAAGCTGCCTACCTCCCAGGCACTTTaGCATGTGCTCCTGTATAAA +
Preference number: 2 (lower is better)
Translates to: TNDLLRFTTPFIKVGKLPTSQAL*HVLLYK
Trigger: TTTATACAGGAGCACATGCCAAAGTGCCTGGGAGGT...AGGCAGCTTTCCCACTTTTATAAAGGGGGTTGTAAATCTCAAGAGGTCATTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR-3UTR TCA 90 bp ACCACTGACTCTGGCTTAACACCACACTCTAACAGAAAAGAAGAAACCTTTACAAATGCAGGATTCGTCTaGCAGTATCTTCTTCAGAGC +
Preference number: 2 (lower is better)
Translates to: TTDSGLTPHSNRKEETFTNAGFV*QYLLQS
Trigger: GCTCTGAAGAAGATACTGTCAGACGAATCCTGCATT...TGTAAAGGTTTCTTCTTTTCTGTTAGAGTGTGGTGTTAAGCCAGAGTCAGTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
3UTR-3UTR TCA 90 bp ATGTTTGTTCAGTTGCCTGTTTTGCAAGAATCTTGGACTAAGGTAAATGAAGGCCTCTGTGCTTGGGATTaGCACAAAGGCTCAAAACTG +
Preference number: 2 (lower is better)
Translates to: MFVQLPVLQESWTKVNEGLCAWD*HKGSKL
Trigger: CAGTTTTGAGCCTTTGTGTCAATCCCAAGCACAGAG...GCCTTCATTTACCTTAGTCCAAGATTCTTGCAAAACAGGCAACTGAACAAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR-3UTR TCA 90 bp AATGTCTACTCCGAAGATGCAAATGTTTTTCCTTGGCAGATCCTCTCTGTGCTTGCTATGGGGAACAAATaGCCTCTTGAGATTTACAAC +
Preference number: 2 (lower is better)
Translates to: NVYSEDANVFPWQILSVLAMGNK*PLEIYN
Trigger: GTTGTAAATCTCAAGAGGTCATTTGTTCCCCATAGC...AAGCACAGAGAGGATCTGCCAAGGAAAAACATTTGCATCTTCGGAGTAGACATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR-3UTR GCA 90 bp ATGTTTGTTCAGTTGCCTGTTTTGCAAGAATCTTGGACTAAGGTAAATGAAGGCACAGGGTGGACAAGGTaGCATCACACTTTGGAGAAA +
Preference number: 2 (lower is better)
Translates to: MFVQLPVLQESWTKVNEGTGWTR*HHTLEK
Trigger: TTTCTCCAAAGTGTGATGGCACCTTGTCCACCCTGT...GCCTTCATTTACCTTAGTCCAAGATTCTTGCAAAACAGGCAACTGAACAAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360515.7
ENST00000395246.5
3UTR-3UTR CCA 90 bp TTGCTCTTGGCAACTGATGTGGCCCCTAAAATAATATGTAGAGCACAGAAAGGCAGAAATGTTAATTTCTaGCATCCCATGGGCTCTTAC +
Preference number: 2 (lower is better)
Translates to: LLLATDVAPKIICRAQKGRNVNF*HPMGSY
Trigger: GTAAGAGCCCATGGGATGCCAGAAATTAACATTTCT...GCCTTTCTGTGCTCTACATATTATTTTAGGGGCCACATCAGTTGCCAAGAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
3UTR-3UTR CCA 90 bp AACCTGAGCAAAGGCTTCGTACAGGTTGTTTTCACTGGCAATAATTCAGCCAGGTCAAGAAACTGCTACTaGAAACAACTGGATACCATA +
Preference number: 2 (lower is better)
Translates to: NLSKGFVQVVFTGNNSARSRNCY*KQLDTI
Trigger: TATGGTATCCAGTTGTTTCCAGTAGCAGTTTCTTGA...CCTGGCTGAATTATTGCCAGTGAAAACAACCTGTACGAAGCCTTTGCTCAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
3UTR-3UTR CCA 90 bp ACCACTGACTCTGGCTTAACACCACACTCTAACAGAAAAGAAGAAACCTTTACATATGTATGTTGCTCTTaGCAACTGATGTGGCCCCTA +
Preference number: 2 (lower is better)
Translates to: TTDSGLTPHSNRKEETFTYVCCS*QLMWPL
Trigger: TAGGGGCCACATCAGTTGCCAAGAGCAACATACATA...TGTAAAGGTTTCTTCTTTTCTGTTAGAGTGTGGTGTTAAGCCAGAGTCAGTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
3UTR-3UTR CCA 90 bp GTTTTCTTATTTCTTGATTTTATTGGCACCTCCCAGGCACTTTGGCATGTGCTCACTTTTGGCTTACCATaGAGATCTGCTCCAACACAT +
Preference number: 2 (lower is better)
Translates to: VFLFLDFIGTSQALWHVLTFGLP*RSAPTH
Trigger: ATGTGTTGGAGCAGATCTCCATGGTAAGCCAAAAGT...GAGCACATGCCAAAGTGCCTGGGAGGTGCCAATAAAATCAAGAAATAAGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR-3UTR CCA 90 bp ACACAAACCACTGACTCTGGCTTAACACCACACTCTAACAGAAAAGAAGAAACCTATATTTACTATTATTaGCCTGGCCATGTCTGGCCG +
Preference number: 2 (lower is better)
Translates to: TQTTDSGLTPHSNRKEETYIYYY*PGHVWP
Trigger: CGGCCAGACATGGCCAGGCCAATAATAGTAAATATA...GGTTTCTTCTTTTCTGTTAGAGTGTGGTGTTAAGCCAGAGTCAGTGGTTTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505065.2
3UTR-3UTR TCA 90 bp ATGTTTGTTCAGTTGCCTGTTTTGCAAGAATCTTGGACTAAGGTAAATGAAGGCAATGCAGGATTCGTCTaGCAGTATCTTCTTCAGAGC +
Preference number: 2 (lower is better)
Translates to: MFVQLPVLQESWTKVNEGNAGFV*QYLLQS
Trigger: GCTCTGAAGAAGATACTGTCAGACGAATCCTGCATT...GCCTTCATTTACCTTAGTCCAAGATTCTTGCAAAACAGGCAACTGAACAAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR-3UTR TCA 90 bp CAAACCACTGACTCTGGCTTAACACCACACTCTAACAGAAAAGAAGAAACCTTTACATATTTTAGAACCTaGGCAAAGGCTTCGTACAGG +
Preference number: 2 (lower is better)
Translates to: QTTDSGLTPHSNRKEETFTYFRT*AKASYR
Trigger: CCTGTACGAAGCCTTTGCTCAGGTTCTAAAATATGT...AAAGGTTTCTTCTTTTCTGTTAGAGTGTGGTGTTAAGCCAGAGTCAGTGGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
3UTR-3UTR TCA 90 bp GTTTTCTTATTTCTTGATTTTATTGGCACCTCCCAGGCACTTTGGCATGTGCTCCACTTGGTGAATCAGTaGCAATGGATGAATTCAACT +
Preference number: 2 (lower is better)
Translates to: VFLFLDFIGTSQALWHVLHLVNQ*QWMNST
Trigger: AGTTGAATTCATCCATTGTCACTGATTCACCAAGTG...GAGCACATGCCAAAGTGCCTGGGAGGTGCCAATAAAATCAAGAAATAAGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR-3UTR GCA 90 bp TTGCTCTTGGCAACTGATGTGGCCCCTAAAATAATATGTAGAGCACAGAAAGGCAGAAGTTCAAGAAACTaGTACTGGAAACAACTGGAT +
Preference number: 2 (lower is better)
Translates to: LLLATDVAPKIICRAQKGRSSRN*YWKQLD
Trigger: ATCCAGTTGTTTCCAGTAGCAGTTTCTTGAACTTCT...GCCTTTCTGTGCTCTACATATTATTTTAGGGGCCACATCAGTTGCCAAGAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
3UTR-3UTR GCA 90 bp ACTGATAATGCTGCACTGGAAATGCTAAACCCAATGTTAACTAAAGTCAACATTGGCAGATCCTCTCTGTaGTTGGGATTGACACAAAGG +
Preference number: 2 (lower is better)
Translates to: TDNAALEMLNPMLTKVNIGRSSL*LGLTQR
Trigger: CCTTTGTGTCAATCCCAAGCACAGAGAGGATCTGCC...AATGTTGACTTTAGTTAACATTGGGTTTAGCATTTCCAGTGCAGCATTATCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR-3UTR GCA 90 bp CTGAGCAGAATGACAACAGTACTCAGGCAAATTCCACAATGCAACATCCACTTGACCTCTTTTACAGAATaGAGATCACTGCTAACAATC +
Preference number: 2 (lower is better)
Translates to: LSRMTTVLRQIPQCNIHLTSFTE*RSLLTI
Trigger: GATTGTTAGCAGTGATCTGCATTCTGTAAAAGAGGT...CAAGTGGATGTTGCATTGTGGAATTTGCCTGAGTACTGTTGTCATTCTGCTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR-3UTR GCA 90 bp ATGTTTGTTCAGTTGCCTGTTTTGCAAGAATCTTGGACTAAGGTAAATGAAGGCAGGCATGCGCCACCATaGCCAGCTAATTTTTGTATT +
Preference number: 2 (lower is better)
Translates to: MFVQLPVLQESWTKVNEGRHAPP*PANFCI
Trigger: AATACAAAAATTAGCTGGGCATGGTGGCGCATGCCT...GCCTTCATTTACCTTAGTCCAAGATTCTTGCAAAACAGGCAACTGAACAAACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505065.2
3UTR-3UTR CCA 90 bp GTTGTTTTCACTGGCAATAATTCAGCCAGGTCGGTATGTATGTTGCTCTTGGCATCAAGAAACTGCTACTaGAAACAACTGGATACCATA +
Preference number: 2 (lower is better)
Translates to: VVFTGNNSARSVCMLLLASRNCY*KQLDTI
Trigger: TATGGTATCCAGTTGTTTCCAGTAGCAGTTTCTTGA...TGCCAAGAGCAACATACATACCGACCTGGCTGAATTATTGCCAGTGAAAACAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
3UTR-3UTR TCA 90 bp TACATCATGGGAAAGTACCTCTTTTACAGAATGCAGATCACTGCTAACAATCCAACATATTTTAGAACCTaGGCAAAGGCTTCGTACAGG +
Preference number: 2 (lower is better)
Translates to: YIMGKYLFYRMQITANNPTYFRT*AKASYR
Trigger: CCTGTACGAAGCCTTTGCTCAGGTTCTAAAATATGT...TGGATTGTTAGCAGTGATCTGCATTCTGTAAAAGAGGTACTTTCCCATGATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR-3UTR GCA 90 bp CTGAGCAGAATGACAACAGTACTCAGGCAAATTCCACAATGCAACATCCACTTGGTCTTCAGTTTCCCTTaGTTAACATTTGTTAGCATA +
Preference number: 2 (lower is better)
Translates to: LSRMTTVLRQIPQCNIHLVFSFP*LTFVSI
Trigger: TATGCTAACAAATGTTAAGCAAGGGAAACTGAAGAC...CAAGTGGATGTTGCATTGTGGAATTTGCCTGAGTACTGTTGTCATTCTGCTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR-3UTR CCA 90 bp TCTTTTACAGAATGCAGATCACTGCTAACAATCCACATGACTAAGTCTTCAGTTTATGTATGTTGCTCTTaGCAACTGATGTGGCCCCTA +
Preference number: 2 (lower is better)
Translates to: SFTECRSLLTIHMTKSSVYVCCS*QLMWPL
Trigger: TAGGGGCCACATCAGTTGCCAAGAGCAACATACATA...AACTGAAGACTTAGTCATGTGGATTGTTAGCAGTGATCTGCATTCTGTAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR-3UTR CCA 90 bp ATGTTTGTTCAGTTGCCTGTTTTGCAAGAATCTTGGACTAAGGTAAATGAAGGCACTTTTGGCTTACCATaGAGATCTGCTCCAACACAT +
Preference number: 2 (lower is better)
Translates to: MFVQLPVLQESWTKVNEGTFGLP*RSAPTH
Trigger: ATGTGTTGGAGCAGATCTCCATGGTAAGCCAAAAGT...GCCTTCATTTACCTTAGTCCAAGATTCTTGCAAAACAGGCAACTGAACAAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR-3UTR CCA 90 bp ACTGATAATGCTGCACTGGAAATGCTAAACCCAATGTTAACTAAAGTCAACATTACCTCCCAGGCACTTTaGCATGTGCTCCTGTATAAA +
Preference number: 2 (lower is better)
Translates to: TDNAALEMLNPMLTKVNITSQAL*HVLLYK
Trigger: TTTATACAGGAGCACATGCCAAAGTGCCTGGGAGGT...AATGTTGACTTTAGTTAACATTGGGTTTAGCATTTCCAGTGCAGCATTATCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR-3UTR TCA 90 bp ACTGATAATGCTGCACTGGAAATGCTAAACCCAATGTTAACTAAAGTCAACATTAATGCAGGATTCGTCTaGCAGTATCTTCTTCAGAGC +
Preference number: 2 (lower is better)
Translates to: TDNAALEMLNPMLTKVNINAGFV*QYLLQS
Trigger: GCTCTGAAGAAGATACTGTCAGACGAATCCTGCATT...AATGTTGACTTTAGTTAACATTGGGTTTAGCATTTCCAGTGCAGCATTATCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR-3UTR TCA 90 bp ATGTTTGTTCAGTTGCCTGTTTTGCAAGAATCTTGGACTAAGGTAAATGAAGGCCACTTGGTGAATCAGTaGCAATGGATGAATTCAACT +
Preference number: 2 (lower is better)
Translates to: MFVQLPVLQESWTKVNEGHLVNQ*QWMNST
Trigger: AGTTGAATTCATCCATTGTCACTGATTCACCAAGTG...GCCTTCATTTACCTTAGTCCAAGATTCTTGCAAAACAGGCAACTGAACAAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR-3UTR TCA 90 bp TCTTTTACAGAATGCAGATCACTGCTAACAATCCACATGACTAAGTCTTCAGTTAGAGTAGTTATAGGCTaGCAAGTCCACTTTTGGCTT +
Preference number: 2 (lower is better)
Translates to: SFTECRSLLTIHMTKSSVRVVIG*QVHFWL
Trigger: AAGCCAAAAGTGGACTTGTCAGCCTATAACTACTCT...AACTGAAGACTTAGTCATGTGGATTGTTAGCAGTGATCTGCATTCTGTAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR-3UTR GCA 90 bp ACAAATGACCTCTTGAGATTTACAACCCCCTTTATAAAAGTGGGAAAGCTGCCTAGAAGTTCAAGAAACTaGTACTGGAAACAACTGGAT +
Preference number: 2 (lower is better)
Translates to: TNDLLRFTTPFIKVGKLPRSSRN*YWKQLD
Trigger: ATCCAGTTGTTTCCAGTAGCAGTTTCTTGAACTTCT...AGGCAGCTTTCCCACTTTTATAAAGGGGGTTGTAAATCTCAAGAGGTCATTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR-3UTR GCA 90 bp ATGTTTGTTCAGTTGCCTGTTTTGCAAGAATCTTGGACTAAGGTAAATGAAGGCAGGCAAATTCCACAATaGAACATCCACTTGGTGAAT +
Preference number: 2 (lower is better)
Translates to: MFVQLPVLQESWTKVNEGRQIPQ*NIHLVN
Trigger: ATTCACCAAGTGGATGTTGCATTGTGGAATTTGCCT...GCCTTCATTTACCTTAGTCCAAGATTCTTGCAAAACAGGCAACTGAACAAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR-3UTR GCA 90 bp GCCTACATCATGGGAAAGTACCTCTTTTACAGAATGCAGATCACTGCTAACAATACCTCTTTTACAGAATaGAGATCACTGCTAACAATC +
Preference number: 2 (lower is better)
Translates to: AYIMGKYLFYRMQITANNTSFTE*RSLLTI
Trigger: GATTGTTAGCAGTGATCTGCATTCTGTAAAAGAGGT...ATTGTTAGCAGTGATCTGCATTCTGTAAAAGAGGTACTTTCCCATGATGTAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR-3UTR TCA 90 bp ACTGATAATGCTGCACTGGAAATGCTAAACCCAATGTTAACTAAAGTCAACATTAGAGTAGTTATAGGCTaGCAAGTCCACTTTTGGCTT +
Preference number: 2 (lower is better)
Translates to: TDNAALEMLNPMLTKVNIRVVIG*QVHFWL
Trigger: AAGCCAAAAGTGGACTTGTCAGCCTATAACTACTCT...AATGTTGACTTTAGTTAACATTGGGTTTAGCATTTCCAGTGCAGCATTATCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR-3UTR CCA 90 bp TACATCATGGGAAAGTACCTCTTTTACAGAATGCAGATCACTGCTAACAATCCATTCATGCCTACATCATaGGAAAGTACCTCTTTTACA +
Preference number: 2 (lower is better)
Translates to: YIMGKYLFYRMQITANNPFMPTS*ESTSFT
Trigger: TGTAAAAGAGGTACTTTCCCATGATGTAGGCATGAA...TGGATTGTTAGCAGTGATCTGCATTCTGTAAAAGAGGTACTTTCCCATGATGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR-3UTR CAA 90 bp TGGCTTACCATGGAGATCTGCTCCAACACATGCTGGTCGTTGGAGCAGCAAAAAAGATCCTCTCTGTGCTaGGGATTGACACAAAGGCTC +
Preference number: 3 (lower is better)
Translates to: WLTMEICSNTCWSLEQQKRSSLC*GLTQRL
Trigger: GAGCCTTTGTGTCAATCCCAAGCACAGAGAGGATCT...TTTTTGCTGCTCCAACGACCAGCATGTGTTGGAGCAGATCTCCATGGTAAGCCA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR CCA 72 bp CATAGCAATGTCCCTGGCCAAGAAACTGACCGTGCCTaGCTGAGCAGAATGACAACAGTACTCAGGCAAATT +
Preference number: 3 (lower is better)
Translates to: HSNVPGQETDRA*LSRMTTVLRQI
Trigger: AATTTGCCTGAGTACTGTTGTCATTCTGCTCAGCCAGGCACGGTCAGTTTCTTGGCCAGGGACATTGCTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR-3UTR CAA 90 bp TGGCTTACCATGGAGATCTGCTCCAACACATGCTGGTCGTTGGAGCAGCAAAAAAGGTCGGTATGTATGTaGCTCTTGGCAACTGATGTG +
Preference number: 3 (lower is better)
Translates to: WLTMEICSNTCWSLEQQKRSVCM*LLATDV
Trigger: CACATCAGTTGCCAAGAGCAACATACATACCGACCT...TTTTTGCTGCTCCAACGACCAGCATGTGTTGGAGCAGATCTCCATGGTAAGCCA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR TCA 72 bp GCCCCTAAAATAATATGTAGAGCACAGAAAGGCCAGTaGCTCTGGAGGTCTGCAGTTAGTAGTACAGGCCAG +
Preference number: 3 (lower is better)
Translates to: APKIICRAQKGQ*LWRSAVSSTGQ
Trigger: CTGGCCTGTACTACTAACTGCAGACCTCCAGAGTCACTGGCCTTTCTGTGCTCTACATATTATTTTAGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
3UTR-3UTR CAA 90 bp CTGAGCAGAATGACAACAGTACTCAGGCAAATTCCACAATGCAACATCCACTTGTGGGGTTTCACCATGTaGGCCAGGCTAGTCTCCAAT +
Preference number: 3 (lower is better)
Translates to: LSRMTTVLRQIPQCNIHLWGFTM*ARLVSN
Trigger: ATTGGAGACTAGCCTGGCCAACATGGTGAAACCCCA...CAAGTGGATGTTGCATTGTGGAATTTGCCTGAGTACTGTTGTCATTCTGCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505065.2
3UTR-3UTR CAA 90 bp CATAACCACACCTGTAACCACACCTGTTTACAACCACAGGTCCTTGCTCTCAAAAGGTCGGTATGTATGTaGCTCTTGGCAACTGATGTG +
Preference number: 3 (lower is better)
Translates to: HNHTCNHTCLQPQVLALKRSVCM*LLATDV
Trigger: CACATCAGTTGCCAAGAGCAACATACATACCGACCT...TTTGAGAGCAAGGACCTGTGGTTGTAAACAGGTGTGGTTACAGGTGTGGTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
3UTR TCA 72 bp TGTAGAGTTAGTGGCAGCTGCAGAGTAGTTATAGGCTaGCAAGTCCACTTTTGGCTTACCATGGAGATCTGC +
Preference number: 3 (lower is better)
Translates to: CRVSGSCRVVIG*QVHFWLTMEIC
Trigger: GCAGATCTCCATGGTAAGCCAAAAGTGGACTTGTCAGCCTATAACTACTCTGCAGCTGCCACTAACTCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR CCA 72 bp TATACATATATTTACTATTATTGGCCTGGCCATGTCTaGCCGTCAGGTCCAGACCCCAGCTCTGAGTACTCA +
Preference number: 3 (lower is better)
Translates to: YTYIYYYWPGHV*PSGPDPSSEYS
Trigger: TGAGTACTCAGAGCTGGGGTCTGGACCTGACGGCCAGACATGGCCAGGCCAATAATAGTAAATATATGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505065.2
3UTR-3UTR CAA 90 bp CTGAGCAGAATGACAACAGTACTCAGGCAAATTCCACAATGCAACATCCACTTGCGGCTTCCCGTACTATaGTTCCAGGAGTTATATGAC +
Preference number: 3 (lower is better)
Translates to: LSRMTTVLRQIPQCNIHLRLPVL*FQELYD
Trigger: GTCATATAACTCCTGGAACAATAGTACGGGAAGCCG...CAAGTGGATGTTGCATTGTGGAATTTGCCTGAGTACTGTTGTCATTCTGCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR-3UTR CAA 90 bp CTGAGCAGAATGACAACAGTACTCAGGCAAATTCCACAATGCAACATCCACTTGCTGACAAGTCCACTTTaGGCTTACCATGGAGATCTG +
Preference number: 3 (lower is better)
Translates to: LSRMTTVLRQIPQCNIHLLTSPL*AYHGDL
Trigger: CAGATCTCCATGGTAAGCCAAAAGTGGACTTGTCAG...CAAGTGGATGTTGCATTGTGGAATTTGCCTGAGTACTGTTGTCATTCTGCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR-3UTR CAA 90 bp ACAAATGACCTCTTGAGATTTACAACCCCCTTTATAAAAGTGGGAAAGCTGCCTAGATCCTCTCTGTGCTaGGGATTGACACAAAGGCTC +
Preference number: 3 (lower is better)
Translates to: TNDLLRFTTPFIKVGKLPRSSLC*GLTQRL
Trigger: GAGCCTTTGTGTCAATCCCAAGCACAGAGAGGATCT...AGGCAGCTTTCCCACTTTTATAAAGGGGGTTGTAAATCTCAAGAGGTCATTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR-3UTR CAA 90 bp GTTGTTTTCACTGGCAATAATTCAGCCAGGTCGGTATGTATGTTGCTCTTGGCATGCAAATGTTTTTCCTaGGCAGATCCTCTCTGTGCT +
Preference number: 3 (lower is better)
Translates to: VVFTGNNSARSVCMLLLACKCFS*ADPLCA
Trigger: AGCACAGAGAGGATCTGCCAAGGAAAAACATTTGCA...TGCCAAGAGCAACATACATACCGACCTGGCTGAATTATTGCCAGTGAAAACAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR-3UTR CAA 90 bp GTTTTCTTATTTCTTGATTTTATTGGCACCTCCCAGGCACTTTGGCATGTGCTCCTGACAAGTCCACTTTaGGCTTACCATGGAGATCTG +
Preference number: 3 (lower is better)
Translates to: VFLFLDFIGTSQALWHVLLTSPL*AYHGDL
Trigger: CAGATCTCCATGGTAAGCCAAAAGTGGACTTGTCAG...GAGCACATGCCAAAGTGCCTGGGAGGTGCCAATAAAATCAAGAAATAAGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR GCA 72 bp CAACATTTCCGCTCTACGCTTACTGGCACCACTTCATaGCTACATCATGGGAAAGTACCTCTTTTACAGAAT +
Preference number: 3 (lower is better)
Translates to: QHFRSTLTGTTS*LHHGKVPLLQN
Trigger: ATTCTGTAAAAGAGGTACTTTCCCATGATGTAGGCATGAAGTGGTGCCAGTAAGCGTAGAGCGGAAATGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR-3UTR CAA 90 bp ACCACTGACTCTGGCTTAACACCACACTCTAACAGAAAAGAAGAAACCTTTACAAGGTCGGTATGTATGTaGCTCTTGGCAACTGATGTG +
Preference number: 3 (lower is better)
Translates to: TTDSGLTPHSNRKEETFTRSVCM*LLATDV
Trigger: CACATCAGTTGCCAAGAGCAACATACATACCGACCT...TGTAAAGGTTTCTTCTTTTCTGTTAGAGTGTGGTGTTAAGCCAGAGTCAGTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
3UTR-3UTR CAA 90 bp ACAAATGACCTCTTGAGATTTACAACCCCCTTTATAAAAGTGGGAAAGCTGCCTCGGCTTCCCGTACTATaGTTCCAGGAGTTATATGAC +
Preference number: 3 (lower is better)
Translates to: TNDLLRFTTPFIKVGKLPRLPVL*FQELYD
Trigger: GTCATATAACTCCTGGAACAATAGTACGGGAAGCCG...AGGCAGCTTTCCCACTTTTATAAAGGGGGTTGTAAATCTCAAGAGGTCATTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR-3UTR CAA 90 bp AATGTCTACTCCGAAGATGCAAATGTTTTTCCTTGGCAGATCCTCTCTGTGCTTCACATAAGAAGCATCTaGTCATCAGAATCCTCCCCA +
Preference number: 3 (lower is better)
Translates to: NVYSEDANVFPWQILSVLHIRSI*SSESSP
Trigger: TGGGGAGGATTCTGATGACAAGATGCTTCTTATGTG...AAGCACAGAGAGGATCTGCCAAGGAAAAACATTTGCATCTTCGGAGTAGACATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505065.2
3UTR-3UTR CAA 90 bp ATGTTTGTTCAGTTGCCTGTTTTGCAAGAATCTTGGACTAAGGTAAATGAAGGCCTGACAAGTCCACTTTaGGCTTACCATGGAGATCTG +
Preference number: 3 (lower is better)
Translates to: MFVQLPVLQESWTKVNEGLTSPL*AYHGDL
Trigger: CAGATCTCCATGGTAAGCCAAAAGTGGACTTGTCAG...GCCTTCATTTACCTTAGTCCAAGATTCTTGCAAAACAGGCAACTGAACAAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR-3UTR CAA 90 bp ATGTTTGTTCAGTTGCCTGTTTTGCAAGAATCTTGGACTAAGGTAAATGAAGGCTCTCTGTGCTTGGGATaGACACAAAGGCTCAAAACT +
Preference number: 3 (lower is better)
Translates to: MFVQLPVLQESWTKVNEGSLCLG*TQRLKT
Trigger: AGTTTTGAGCCTTTGTGTCAATCCCAAGCACAGAGA...GCCTTCATTTACCTTAGTCCAAGATTCTTGCAAAACAGGCAACTGAACAAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR-3UTR CAA 90 bp ACTGATAATGCTGCACTGGAAATGCTAAACCCAATGTTAACTAAAGTCAACATTAGGTCGGTATGTATGTaGCTCTTGGCAACTGATGTG +
Preference number: 3 (lower is better)
Translates to: TDNAALEMLNPMLTKVNIRSVCM*LLATDV
Trigger: CACATCAGTTGCCAAGAGCAACATACATACCGACCT...AATGTTGACTTTAGTTAACATTGGGTTTAGCATTTCCAGTGCAGCATTATCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR GCA 72 bp CTGCAGTTAGTAGTACAGGCCAGAAGTTCAAGAAACTaGTACTGGAAACAACTGGATACCATAACATTAAAA +
Preference number: 3 (lower is better)
Translates to: LQLVVQARSSRN*YWKQLDTITLK
Trigger: TTTTAATGTTATGGTATCCAGTTGTTTCCAGTAGCAGTTTCTTGAACTTCTGGCCTGTACTACTAACTGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
3UTR-3UTR CAA 90 bp ACTGATAATGCTGCACTGGAAATGCTAAACCCAATGTTAACTAAAGTCAACATTATATATTTACTATTATaGGCCTGGCCATGTCTGGCC +
Preference number: 3 (lower is better)
Translates to: TDNAALEMLNPMLTKVNIIYLLL*AWPCLA
Trigger: GGCCAGACATGGCCAGGCCAATAATAGTAAATATAT...AATGTTGACTTTAGTTAACATTGGGTTTAGCATTTCCAGTGCAGCATTATCAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505065.2
3UTR-3UTR CAA 90 bp ACTGATAATGCTGCACTGGAAATGCTAAACCCAATGTTAACTAAAGTCAACATTAAGGCTTCGTACAGGTaGTTTTCACTGGCAATAATT +
Preference number: 3 (lower is better)
Translates to: TDNAALEMLNPMLTKVNIKASYR*FSLAII
Trigger: AATTATTGCCAGTGAAAACAACCTGTACGAAGCCTT...AATGTTGACTTTAGTTAACATTGGGTTTAGCATTTCCAGTGCAGCATTATCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
3UTR TCA 72 bp AAAACTTACATTCCAAGTGCAGAAACTACACTTAGCTaGGTAATTTTGCCTTTCCCAATAAGTTCACCATTA +
Preference number: 3 (lower is better)
Translates to: KTYIPSAETTLS*VILPFPISSPL
Trigger: TAATGGTGAACTTATTGGGAAAGGCAAAATTACTCAGCTAAGTGTAGTTTCTGCACTTGGAATGTAAGTTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505065.2
CDS-3UTR GCA 90 bp AACCTGAGCAAAGGCTTCGTACAGGTTGTTTTCACTGGCAATAATTCAGCCAGGTGCCGCCCCAACGCCTaGAGCTGCGCTCCCCAGCGC +
Preference number: 4 (lower is better)
Translates to: NLSKGFVQVVFTGNNSARCRPNA*SCAPQR
Trigger: GCGCTGGGGAGCGCAGCTGCAGGCGTTGGGGCGGCA...CCTGGCTGAATTATTGCCAGTGAAAACAACCTGTACGAAGCCTTTGCTCAGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395246.5
ENST00000505065.2
CDS-3UTR GCA 90 bp CTGAGCAGAATGACAACAGTACTCAGGCAAATTCCACAATGCAACATCCACTTGCCCAACGCCTGCAGCTaGGCTCCCCAGCGCGCTCGC +
Preference number: 4 (lower is better)
Translates to: LSRMTTVLRQIPQCNIHLPNACS*APQRAR
Trigger: GCGAGCGCGCTGGGGAGCGCAGCTGCAGGCGTTGGG...CAAGTGGATGTTGCATTGTGGAATTTGCCTGAGTACTGTTGTCATTCTGCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395246.5
ENST00000505065.2
CDS-3UTR GCA 90 bp CAAACCACTGACTCTGGCTTAACACCACACTCTAACAGAAAAGAAGAAACCTTTCCCAACGCCTGCAGCTaGGCTCCCCAGCGCGCTCGC +
Preference number: 4 (lower is better)
Translates to: QTTDSGLTPHSNRKEETFPNACS*APQRAR
Trigger: GCGAGCGCGCTGGGGAGCGCAGCTGCAGGCGTTGGG...AAAGGTTTCTTCTTTTCTGTTAGAGTGTGGTGTTAAGCCAGAGTCAGTGGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395246.5
ENST00000505065.2
CDS-3UTR GCA 90 bp GCCTACATCATGGGAAAGTACCTCTTTTACAGAATGCAGATCACTGCTAACAATTGCCGCCCCAACGCCTaGAGCTGCGCTCCCCAGCGC +
Preference number: 4 (lower is better)
Translates to: AYIMGKYLFYRMQITANNCRPNA*SCAPQR
Trigger: GCGCTGGGGAGCGCAGCTGCAGGCGTTGGGGCGGCA...ATTGTTAGCAGTGATCTGCATTCTGTAAAAGAGGTACTTTCCCATGATGTAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395246.5
ENST00000505065.2
CDS-3UTR TCA 90 bp TACATATATTTACTATTATTGGCCTGGCCATGTCTGGCCGTCAGGTCCAGACCCCGTGCCTCAGCCTCCTaGGTAGCTGCGATTACAGGC +
Preference number: 4 (lower is better)
Translates to: YIYLLLLAWPCLAVRSRPRASAS*VAAITG
Trigger: GCCTGTAATCGCAGCTACTCAGGAGGCTGAGGCACG...GGGTCTGGACCTGACGGCCAGACATGGCCAGGCCAATAATAGTAAATATATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505065.2
CDS-3UTR CCA 90 bp TGGCTTACCATGGAGATCTGCTCCAACACATGCTGGTCGTTGGAGCAGCAAAAATCCACGAGCTGCATCTaGACATTGGCAGGCATTCCA +
Preference number: 4 (lower is better)
Translates to: WLTMEICSNTCWSLEQQKSTSCI*TLAGIP
Trigger: TGGAATGCCTGCCAATGTCCAGATGCAGCTCGTGGA...TTTTTGCTGCTCCAACGACCAGCATGTGTTGGAGCAGATCTCCATGGTAAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CCA 90 bp TGGCTTACCATGGAGATCTGCTCCAACACATGCTGGTCGTTGGAGCAGCAAAAACCGCTCTACGCTTACTaGCACCACTTCATGCCTACA +
Preference number: 4 (lower is better)
Translates to: WLTMEICSNTCWSLEQQKPLYAY*HHFMPT
Trigger: TGTAGGCATGAAGTGGTGCCAGTAAGCGTAGAGCGG...TTTTTGCTGCTCCAACGACCAGCATGTGTTGGAGCAGATCTCCATGGTAAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR GCA 90 bp GACTCTGGAGGTCTGCAGTTAGTAGTACAGGCCAGAAGTTCAAGAAACTGCTACTTCGTATCCACGAGCTaGATCTGGACATTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: DSGGLQLVVQARSSRNCYFVSTS*IWTLAG
Trigger: GCCTGCCAATGTCCAGATGCAGCTCGTGGATACGAA...GTAGCAGTTTCTTGAACTTCTGGCCTGTACTACTAACTGCAGACCTCCAGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS-3UTR GCA 90 bp TGGCTTACCATGGAGATCTGCTCCAACACATGCTGGTCGTTGGAGCAGCAAAAAGGCAGATCCTCTCTGTaGTTGGGATTGACACAAAGG +
Preference number: 4 (lower is better)
Translates to: WLTMEICSNTCWSLEQQKGRSSL*LGLTQR
Trigger: CCTTTGTGTCAATCCCAAGCACAGAGAGGATCTGCC...TTTTTGCTGCTCCAACGACCAGCATGTGTTGGAGCAGATCTCCATGGTAAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR GCA 90 bp CTGAGCAGAATGACAACAGTACTCAGGCAAATTCCACAATGCAACATCCACTTGGCATTCTCAGCTGACTaGAACCCCTGCCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: LSRMTTVLRQIPQCNIHLAFSAD*NPCLPG
Trigger: ACCTGGGAGGCAGGGGTTGCAGTCAGCTGAGAATGC...CAAGTGGATGTTGCATTGTGGAATTTGCCTGAGTACTGTTGTCATTCTGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505065.2
CDS-3UTR CCA 90 bp GCTGACAAGTCCACTTTTGGCTTACCATGGAGATCTGCTCCAACACATGCTGGTGAAACTGACCGTGCCTaGCTGAGCAGAATGACAACA +
Preference number: 4 (lower is better)
Translates to: ADKSTFGLPWRSAPTHAGETDRA*LSRMTT
Trigger: TGTTGTCATTCTGCTCAGCCAGGCACGGTCAGTTTC...ACCAGCATGTGTTGGAGCAGATCTCCATGGTAAGCCAAAAGTGGACTTGTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CCA 90 bp TACATCATGGGAAAGTACCTCTTTTACAGAATGCAGATCACTGCTAACAATCCATGGCCTGGCCATGTCTaGCCGTCAGGTCCAGACCCC +
Preference number: 4 (lower is better)
Translates to: YIMGKYLFYRMQITANNPWPGHV*PSGPDP
Trigger: GGGGTCTGGACCTGACGGCCAGACATGGCCAGGCCA...TGGATTGTTAGCAGTGATCTGCATTCTGTAAAAGAGGTACTTTCCCATGATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505065.2
CDS-3UTR TCA 90 bp AACCTGAGCAAAGGCTTCGTACAGGTTGTTTTCACTGGCAATAATTCAGCCAGGCGTCGCCTTTTAGGCTaGGGCTGTTCTGCAATACAG +
Preference number: 4 (lower is better)
Translates to: NLSKGFVQVVFTGNNSARRRLLG*GCSAIQ
Trigger: CTGTATTGCAGAACAGCCTCAGCCTAAAAGGCGACG...CCTGGCTGAATTATTGCCAGTGAAAACAACCTGTACGAAGCCTTTGCTCAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR TCA 90 bp TACATCATGGGAAAGTACCTCTTTTACAGAATGCAGATCACTGCTAACAATCCATGGCGCATTCTCAGCTaGCTGCAACCCCTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: YIMGKYLFYRMQITANNPWRILS*LQPLPP
Trigger: GGGAGGCAGGGGTTGCAGTCAGCTGAGAATGCGCCA...TGGATTGTTAGCAGTGATCTGCATTCTGTAAAAGAGGTACTTTCCCATGATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505065.2
CDS-3UTR CCA 90 bp AACCTGAGCAAAGGCTTCGTACAGGTTGTTTTCACTGGCAATAATTCAGCCAGGGCTGCATCTGGACATTaGCAGGCATTCCACCTCCAT +
Preference number: 4 (lower is better)
Translates to: NLSKGFVQVVFTGNNSARAASGH*QAFHLH
Trigger: ATGGAGGTGGAATGCCTGCCAATGTCCAGATGCAGC...CCTGGCTGAATTATTGCCAGTGAAAACAACCTGTACGAAGCCTTTGCTCAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
3UTR CAA 72 bp CAGCTGCAGAGTAGTTATAGGCTGACAAGTCCACTTTaGGCTTACCATGGAGATCTGCTCCAACACATGCTG +
Preference number: 4 (lower is better)
Translates to: QLQSSYRLTSPL*AYHGDLLQHML
Trigger: CAGCATGTGTTGGAGCAGATCTCCATGGTAAGCCAAAAGTGGACTTGTCAGCCTATAACTACTCTGCAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR TCA 90 bp ACACAAACCACTGACTCTGGCTTAACACCACACTCTAACAGAAAAGAAGAAACCTCCAGACCCCAGCTCTaGGTACTCACTGGAGAAAGG +
Preference number: 4 (lower is better)
Translates to: TQTTDSGLTPHSNRKEETSRPQL*VLTGER
Trigger: CCTTTCTCCAGTGAGTACTCAGAGCTGGGGTCTGGA...GGTTTCTTCTTTTCTGTTAGAGTGTGGTGTTAAGCCAGAGTCAGTGGTTTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505065.2
CDS-3UTR GCA 90 bp CTGAGCAGAATGACAACAGTACTCAGGCAAATTCCACAATGCAACATCCACTTGTTCGTATCCACGAGCTaGATCTGGACATTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: LSRMTTVLRQIPQCNIHLFVSTS*IWTLAG
Trigger: GCCTGCCAATGTCCAGATGCAGCTCGTGGATACGAA...CAAGTGGATGTTGCATTGTGGAATTTGCCTGAGTACTGTTGTCATTCTGCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR GCA 90 bp GACTCTGGAGGTCTGCAGTTAGTAGTACAGGCCAGAAGTTCAAGAAACTGCTACGGTCGGTATGTATGTTaGTCTTGGCAACTGATGTGG +
Preference number: 4 (lower is better)
Translates to: DSGGLQLVVQARSSRNCYGRYVC*SWQLMW
Trigger: CCACATCAGTTGCCAAGAGCAACATACATACCGACC...GTAGCAGTTTCTTGAACTTCTGGCCTGTACTACTAACTGCAGACCTCCAGAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS-3UTR GCA 90 bp CATAACCACACCTGTAACCACACCTGTTTACAACCACAGGTCCTTGCTCTCAAAGGCAGATCCTCTCTGTaGTTGGGATTGACACAAAGG +
Preference number: 4 (lower is better)
Translates to: HNHTCNHTCLQPQVLALKGRSSL*LGLTQR
Trigger: CCTTTGTGTCAATCCCAAGCACAGAGAGGATCTGCC...TTTGAGAGCAAGGACCTGTGGTTGTAAACAGGTGTGGTTACAGGTGTGGTTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR GCA 90 bp TGGCTTACCATGGAGATCTGCTCCAACACATGCTGGTCGTTGGAGCAGCAAAAAACTGGCACCACTTCATaGCTACATCATGGGAAAGTA +
Preference number: 4 (lower is better)
Translates to: WLTMEICSNTCWSLEQQKTGTTS*LHHGKV
Trigger: TACTTTCCCATGATGTAGGCATGAAGTGGTGCCAGT...TTTTTGCTGCTCCAACGACCAGCATGTGTTGGAGCAGATCTCCATGGTAAGCCA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CCA 90 bp TTGCTCTTGGCAACTGATGTGGCCCCTAAAATAATATGTAGAGCACAGAAAGGCGCTGCATCTGGACATTaGCAGGCATTCCACCTCCAT +
Preference number: 4 (lower is better)
Translates to: LLLATDVAPKIICRAQKGAASGH*QAFHLH
Trigger: ATGGAGGTGGAATGCCTGCCAATGTCCAGATGCAGC...GCCTTTCTGTGCTCTACATATTATTTTAGGGGCCACATCAGTTGCCAAGAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS-3UTR CCA 90 bp AACCTGAGCAAAGGCTTCGTACAGGTTGTTTTCACTGGCAATAATTCAGCCAGGGAAACTGACCGTGCCTaGCTGAGCAGAATGACAACA +
Preference number: 4 (lower is better)
Translates to: NLSKGFVQVVFTGNNSARETDRA*LSRMTT
Trigger: TGTTGTCATTCTGCTCAGCCAGGCACGGTCAGTTTC...CCTGGCTGAATTATTGCCAGTGAAAACAACCTGTACGAAGCCTTTGCTCAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CCA 90 bp GACTCTGGAGGTCTGCAGTTAGTAGTACAGGCCAGAAGTTCAAGAAACTGCTACACCTCCCAGGCACTTTaGCATGTGCTCCTGTATAAA +
Preference number: 4 (lower is better)
Translates to: DSGGLQLVVQARSSRNCYTSQAL*HVLLYK
Trigger: TTTATACAGGAGCACATGCCAAAGTGCCTGGGAGGT...GTAGCAGTTTCTTGAACTTCTGGCCTGTACTACTAACTGCAGACCTCCAGAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR TCA 90 bp GTTGTTTTCACTGGCAATAATTCAGCCAGGTCGGTATGTATGTTGCTCTTGGCACGCTCCTCAATACGATaGTGTCCAGTGATGCCAAGA +
Preference number: 4 (lower is better)
Translates to: VVFTGNNSARSVCMLLLARSSIR*CPVMPR
Trigger: TCTTGGCATCACTGGACATCATCGTATTGAGGAGCG...TGCCAAGAGCAACATACATACCGACCTGGCTGAATTATTGCCAGTGAAAACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS-3UTR TCA 90 bp CTGAGCAGAATGACAACAGTACTCAGGCAAATTCCACAATGCAACATCCACTTGGACTGGAGGAGAGTATaGCCGCAACACTCAGATACA +
Preference number: 4 (lower is better)
Translates to: LSRMTTVLRQIPQCNIHLDWRRV*PQHSDT
Trigger: TGTATCTGAGTGTTGCGGTCATACTCTCCTCCAGTC...CAAGTGGATGTTGCATTGTGGAATTTGCCTGAGTACTGTTGTCATTCTGCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR TCA 90 bp TGGCTTACCATGGAGATCTGCTCCAACACATGCTGGTCGTTGGAGCAGCAAAAAAGAGTAGTTATAGGCTaGCAAGTCCACTTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: WLTMEICSNTCWSLEQQKRVVIG*QVHFWL
Trigger: AAGCCAAAAGTGGACTTGTCAGCCTATAACTACTCT...TTTTTGCTGCTCCAACGACCAGCATGTGTTGGAGCAGATCTCCATGGTAAGCCA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR TCA 90 bp TGGCTTACCATGGAGATCTGCTCCAACACATGCTGGTCGTTGGAGCAGCAAAAAGCTATGGGGAACAAATaGCCTCTTGAGATTTACAAC +
Preference number: 4 (lower is better)
Translates to: WLTMEICSNTCWSLEQQKAMGNK*PLEIYN
Trigger: GTTGTAAATCTCAAGAGGTCATTTGTTCCCCATAGC...TTTTTGCTGCTCCAACGACCAGCATGTGTTGGAGCAGATCTCCATGGTAAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR TCA 90 bp GCTGACAAGTCCACTTTTGGCTTACCATGGAGATCTGCTCCAACACATGCTGGTGCTATGGGGAACAAATaGCCTCTTGAGATTTACAAC +
Preference number: 4 (lower is better)
Translates to: ADKSTFGLPWRSAPTHAGAMGNK*PLEIYN
Trigger: GTTGTAAATCTCAAGAGGTCATTTGTTCCCCATAGC...ACCAGCATGTGTTGGAGCAGATCTCCATGGTAAGCCAAAAGTGGACTTGTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR GCA 90 bp AACCTGAGCAAAGGCTTCGTACAGGTTGTTTTCACTGGCAATAATTCAGCCAGGACAGGGTGGACAAGGTaGCATCACACTTTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: NLSKGFVQVVFTGNNSARTGWTR*HHTLEK
Trigger: TTTCTCCAAAGTGTGATGGCACCTTGTCCACCCTGT...CCTGGCTGAATTATTGCCAGTGAAAACAACCTGTACGAAGCCTTTGCTCAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
CDS-3UTR GCA 90 bp CTGAGCAGAATGACAACAGTACTCAGGCAAATTCCACAATGCAACATCCACTTGGGCAGATCCTCTCTGTaGTTGGGATTGACACAAAGG +
Preference number: 4 (lower is better)
Translates to: LSRMTTVLRQIPQCNIHLGRSSL*LGLTQR
Trigger: CCTTTGTGTCAATCCCAAGCACAGAGAGGATCTGCC...CAAGTGGATGTTGCATTGTGGAATTTGCCTGAGTACTGTTGTCATTCTGCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR GCA 90 bp GCTGACAAGTCCACTTTTGGCTTACCATGGAGATCTGCTCCAACACATGCTGGTAGGCACTTTGGCATGTaGTCCTGTATAAAGTGTAGT +
Preference number: 4 (lower is better)
Translates to: ADKSTFGLPWRSAPTHAGRHFGM*SCIKCS
Trigger: ACTACACTTTATACAGGAGCACATGCCAAAGTGCCT...ACCAGCATGTGTTGGAGCAGATCTCCATGGTAAGCCAAAAGTGGACTTGTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CCA 90 bp GACTCTGGAGGTCTGCAGTTAGTAGTACAGGCCAGAAGTTCAAGAAACTGCTACCTCCATAACCTCCCTTaGACTGCATTTGGTTCTGAA +
Preference number: 4 (lower is better)
Translates to: DSGGLQLVVQARSSRNCYLHNLP*TAFGSE
Trigger: TTCAGAACCAAATGCAGTCCAAGGGAGGTTATGGAG...GTAGCAGTTTCTTGAACTTCTGGCCTGTACTACTAACTGCAGACCTCCAGAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS-3UTR CCA 90 bp AATGTCTACTCCGAAGATGCAAATGTTTTTCCTTGGCAGATCCTCTCTGTGCTTGCTGCATCTGGACATTaGCAGGCATTCCACCTCCAT +
Preference number: 4 (lower is better)
Translates to: NVYSEDANVFPWQILSVLAASGH*QAFHLH
Trigger: ATGGAGGTGGAATGCCTGCCAATGTCCAGATGCAGC...AAGCACAGAGAGGATCTGCCAAGGAAAAACATTTGCATCTTCGGAGTAGACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CCA 90 bp AATGTCTACTCCGAAGATGCAAATGTTTTTCCTTGGCAGATCCTCTCTGTGCTTTCCACGAGCTGCATCTaGACATTGGCAGGCATTCCA +
Preference number: 4 (lower is better)
Translates to: NVYSEDANVFPWQILSVLSTSCI*TLAGIP
Trigger: TGGAATGCCTGCCAATGTCCAGATGCAGCTCGTGGA...AAGCACAGAGAGGATCTGCCAAGGAAAAACATTTGCATCTTCGGAGTAGACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CCA 90 bp ACACAAACCACTGACTCTGGCTTAACACCACACTCTAACAGAAAAGAAGAAACCTCCACGAGCTGCATCTaGACATTGGCAGGCATTCCA +
Preference number: 4 (lower is better)
Translates to: TQTTDSGLTPHSNRKEETSTSCI*TLAGIP
Trigger: TGGAATGCCTGCCAATGTCCAGATGCAGCTCGTGGA...GGTTTCTTCTTTTCTGTTAGAGTGTGGTGTTAAGCCAGAGTCAGTGGTTTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS-3UTR CCA 90 bp CTGAGCAGAATGACAACAGTACTCAGGCAAATTCCACAATGCAACATCCACTTGGGTGCCATCACACTTTaGAGAAAGGACCAGGGCTAT +
Preference number: 4 (lower is better)
Translates to: LSRMTTVLRQIPQCNIHLGAITL*RKDQGY
Trigger: ATAGCCCTGGTCCTTTCTCCAAAGTGTGATGGCACC...CAAGTGGATGTTGCATTGTGGAATTTGCCTGAGTACTGTTGTCATTCTGCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360515.7
ENST00000395246.5
CDS-3UTR CCA 90 bp GTTGTTTTCACTGGCAATAATTCAGCCAGGTCGGTATGTATGTTGCTCTTGGCAGGTGCCATCACACTTTaGAGAAAGGACCAGGGCTAT +
Preference number: 4 (lower is better)
Translates to: VVFTGNNSARSVCMLLLAGAITL*RKDQGY
Trigger: ATAGCCCTGGTCCTTTCTCCAAAGTGTGATGGCACC...TGCCAAGAGCAACATACATACCGACCTGGCTGAATTATTGCCAGTGAAAACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
CDS-3UTR CCA 90 bp CATAACCACACCTGTAACCACACCTGTTTACAACCACAGGTCCTTGCTCTCAAAATAATCACGACAGGGTaGACAAGGTGCCATCACACT +
Preference number: 4 (lower is better)
Translates to: HNHTCNHTCLQPQVLALKIITTG*TRCHHT
Trigger: AGTGTGATGGCACCTTGTCCACCCTGTCGTGATTAT...TTTGAGAGCAAGGACCTGTGGTTGTAAACAGGTGTGGTTACAGGTGTGGTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS-3UTR CCA 90 bp CATAACCACACCTGTAACCACACCTGTTTACAACCACAGGTCCTTGCTCTCAAAAAAGATCAAGTAATCTaGTGCCCCGCTGTACTGGGT +
Preference number: 4 (lower is better)
Translates to: HNHTCNHTCLQPQVLALKKDQVI*CPAVLG
Trigger: ACCCAGTACAGCGGGGCACCAGATTACTTGATCTTT...TTTGAGAGCAAGGACCTGTGGTTGTAAACAGGTGTGGTTACAGGTGTGGTTATG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CCA 90 bp TGGCTTACCATGGAGATCTGCTCCAACACATGCTGGTCGTTGGAGCAGCAAAAAACTTTTGGCTTACCATaGAGATCTGCTCCAACACAT +
Preference number: 4 (lower is better)
Translates to: WLTMEICSNTCWSLEQQKTFGLP*RSAPTH
Trigger: ATGTGTTGGAGCAGATCTCCATGGTAAGCCAAAAGT...TTTTTGCTGCTCCAACGACCAGCATGTGTTGGAGCAGATCTCCATGGTAAGCCA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CCA 90 bp GTTTTCTTATTTCTTGATTTTATTGGCACCTCCCAGGCACTTTGGCATGTGCTCCCGCTCTACGCTTACTaGCACCACTTCATGCCTACA +
Preference number: 4 (lower is better)
Translates to: VFLFLDFIGTSQALWHVLPLYAY*HHFMPT
Trigger: TGTAGGCATGAAGTGGTGCCAGTAAGCGTAGAGCGG...GAGCACATGCCAAAGTGCCTGGGAGGTGCCAATAAAATCAAGAAATAAGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR TCA 90 bp TACATATATTTACTATTATTGGCCTGGCCATGTCTGGCCGTCAGGTCCAGACCCCTGCAATACAGCAGTTaGAACACAACCAGAATTCAC +
Preference number: 4 (lower is better)
Translates to: YIYLLLLAWPCLAVRSRPLQYSS*NTTRIH
Trigger: GTGAATTCTGGTTGTGTTTCAACTGCTGTATTGCAG...GGGTCTGGACCTGACGGCCAGACATGGCCAGGCCAATAATAGTAAATATATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505065.2
CDS-3UTR TCA 90 bp GACTCTGGAGGTCTGCAGTTAGTAGTACAGGCCAGAAGTTCAAGAAACTGCTACTCTCCTGATCCAACATaGGCTGTATGCACAAAGTTT +
Preference number: 4 (lower is better)
Translates to: DSGGLQLVVQARSSRNCYSPDPT*AVCTKF
Trigger: AAACTTTGTGCATACAGCTCATGTTGGATCAGGAGA...GTAGCAGTTTCTTGAACTTCTGGCCTGTACTACTAACTGCAGACCTCCAGAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS-3UTR TCA 90 bp TTGCTCTTGGCAACTGATGTGGCCCCTAAAATAATATGTAGAGCACAGAAAGGCACTGAACAGGTCTCCTaGTCCAACATGAGCTGTATG +
Preference number: 4 (lower is better)
Translates to: LLLATDVAPKIICRAQKGTEQVS*SNMSCM
Trigger: CATACAGCTCATGTTGGATCAGGAGACCTGTTCAGT...GCCTTTCTGTGCTCTACATATTATTTTAGGGGCCACATCAGTTGCCAAGAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS-3UTR TCA 90 bp TACATATATTTACTATTATTGGCCTGGCCATGTCTGGCCGTCAGGTCCAGACCCGACTGCATTTGGTTCTaGATGGAGCTAACTGAATTC +
Preference number: 4 (lower is better)
Translates to: YIYLLLLAWPCLAVRSRPDCIWF*MELTEF
Trigger: GAATTCAGTTAGCTCCATTCAGAACCAAATGCAGTC...GGGTCTGGACCTGACGGCCAGACATGGCCAGGCCAATAATAGTAAATATATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505065.2
CDS-3UTR TCA 90 bp AACCTGAGCAAAGGCTTCGTACAGGTTGTTTTCACTGGCAATAATTCAGCCAGGAATGCAGGATTCGTCTaGCAGTATCTTCTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: NLSKGFVQVVFTGNNSARNAGFV*QYLLQS
Trigger: GCTCTGAAGAAGATACTGTCAGACGAATCCTGCATT...CCTGGCTGAATTATTGCCAGTGAAAACAACCTGTACGAAGCCTTTGCTCAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS-3UTR TCA 90 bp CTGAGCAGAATGACAACAGTACTCAGGCAAATTCCACAATGCAACATCCACTTGGAGAACACAAACCACTaGCTCTGGCTTAACACCACA +
Preference number: 4 (lower is better)
Translates to: LSRMTTVLRQIPQCNIHLENTNH*LWLNTT
Trigger: TGTGGTGTTAAGCCAGAGTCAGTGGTTTGTGTTCTC...CAAGTGGATGTTGCATTGTGGAATTTGCCTGAGTACTGTTGTCATTCTGCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR TCA 90 bp TTGCTCTTGGCAACTGATGTGGCCCCTAAAATAATATGTAGAGCACAGAAAGGCGAGAACACAAACCACTaGCTCTGGCTTAACACCACA +
Preference number: 4 (lower is better)
Translates to: LLLATDVAPKIICRAQKGENTNH*LWLNTT
Trigger: TGTGGTGTTAAGCCAGAGTCAGTGGTTTGTGTTCTC...GCCTTTCTGTGCTCTACATATTATTTTAGGGGCCACATCAGTTGCCAAGAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS-3UTR GCA 90 bp CAAACCACTGACTCTGGCTTAACACCACACTCTAACAGAAAAGAAGAAACCTTTTTCGTATCCACGAGCTaGATCTGGACATTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: QTTDSGLTPHSNRKEETFFVSTS*IWTLAG
Trigger: GCCTGCCAATGTCCAGATGCAGCTCGTGGATACGAA...AAAGGTTTCTTCTTTTCTGTTAGAGTGTGGTGTTAAGCCAGAGTCAGTGGTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS-3UTR GCA 90 bp ACCACTGACTCTGGCTTAACACCACACTCTAACAGAAAAGAAGAAACCTTTACATTCGTATCCACGAGCTaGATCTGGACATTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: TTDSGLTPHSNRKEETFTFVSTS*IWTLAG
Trigger: GCCTGCCAATGTCCAGATGCAGCTCGTGGATACGAA...TGTAAAGGTTTCTTCTTTTCTGTTAGAGTGTGGTGTTAAGCCAGAGTCAGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS-3UTR GCA 90 bp TTGCTCTTGGCAACTGATGTGGCCCCTAAAATAATATGTAGAGCACAGAAAGGCACAGGGTGGACAAGGTaGCATCACACTTTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: LLLATDVAPKIICRAQKGTGWTR*HHTLEK
Trigger: TTTCTCCAAAGTGTGATGGCACCTTGTCCACCCTGT...GCCTTTCTGTGCTCTACATATTATTTTAGGGGCCACATCAGTTGCCAAGAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
CDS-3UTR GCA 90 bp GTTGTTTTCACTGGCAATAATTCAGCCAGGTCGGTATGTATGTTGCTCTTGGCAGGTCGGTATGTATGTTaGTCTTGGCAACTGATGTGG +
Preference number: 4 (lower is better)
Translates to: VVFTGNNSARSVCMLLLAGRYVC*SWQLMW
Trigger: CCACATCAGTTGCCAAGAGCAACATACATACCGACC...TGCCAAGAGCAACATACATACCGACCTGGCTGAATTATTGCCAGTGAAAACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS-3UTR GCA 90 bp TGGCTTACCATGGAGATCTGCTCCAACACATGCTGGTCGTTGGAGCAGCAAAAAAGGCAAATTCCACAATaGAACATCCACTTGGTGAAT +
Preference number: 4 (lower is better)
Translates to: WLTMEICSNTCWSLEQQKRQIPQ*NIHLVN
Trigger: ATTCACCAAGTGGATGTTGCATTGTGGAATTTGCCT...TTTTTGCTGCTCCAACGACCAGCATGTGTTGGAGCAGATCTCCATGGTAAGCCA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR GCA 90 bp ACACAAACCACTGACTCTGGCTTAACACCACACTCTAACAGAAAAGAAGAAACCAGGTGTGAGCCACCATaGTCGGCCTCAATACTCAAA +
Preference number: 4 (lower is better)
Translates to: TQTTDSGLTPHSNRKEETRCEPP*SASILK
Trigger: TTTGAGTATTGAGGCCGAGCATGGTGGCTCACACCT...GGTTTCTTCTTTTCTGTTAGAGTGTGGTGTTAAGCCAGAGTCAGTGGTTTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505065.2
CDS-3UTR CCA 90 bp CATAACCACACCTGTAACCACACCTGTTTACAACCACAGGTCCTTGCTCTCAAAGTCACTCCTCAGCAATaGAGTAACACATTCAGCTAC +
Preference number: 4 (lower is better)
Translates to: HNHTCNHTCLQPQVLALKVTPQQ*SNTFSY
Trigger: GTAGCTGAATGTGTTACTCCATTGCTGAGGAGTGAC...TTTGAGAGCAAGGACCTGTGGTTGTAAACAGGTGTGGTTACAGGTGTGGTTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000503291.5
ENST00000505065.2
CDS-3UTR CCA 90 bp AACCTGAGCAAAGGCTTCGTACAGGTTGTTTTCACTGGCAATAATTCAGCCAGGCTCCATAACCTCCCTTaGACTGCATTTGGTTCTGAA +
Preference number: 4 (lower is better)
Translates to: NLSKGFVQVVFTGNNSARLHNLP*TAFGSE
Trigger: TTCAGAACCAAATGCAGTCCAAGGGAGGTTATGGAG...CCTGGCTGAATTATTGCCAGTGAAAACAACCTGTACGAAGCCTTTGCTCAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS-3UTR CCA 90 bp GCCTACATCATGGGAAAGTACCTCTTTTACAGAATGCAGATCACTGCTAACAATTCCACGAGCTGCATCTaGACATTGGCAGGCATTCCA +
Preference number: 4 (lower is better)
Translates to: AYIMGKYLFYRMQITANNSTSCI*TLAGIP
Trigger: TGGAATGCCTGCCAATGTCCAGATGCAGCTCGTGGA...ATTGTTAGCAGTGATCTGCATTCTGTAAAAGAGGTACTTTCCCATGATGTAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CCA 90 bp CTGAGCAGAATGACAACAGTACTCAGGCAAATTCCACAATGCAACATCCACTTGATAATCACGACAGGGTaGACAAGGTGCCATCACACT +
Preference number: 4 (lower is better)
Translates to: LSRMTTVLRQIPQCNIHLIITTG*TRCHHT
Trigger: AGTGTGATGGCACCTTGTCCACCCTGTCGTGATTAT...CAAGTGGATGTTGCATTGTGGAATTTGCCTGAGTACTGTTGTCATTCTGCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CCA 90 bp GACTCTGGAGGTCTGCAGTTAGTAGTACAGGCCAGAAGTTCAAGAAACTGCTACACTTTTGGCTTACCATaGAGATCTGCTCCAACACAT +
Preference number: 4 (lower is better)
Translates to: DSGGLQLVVQARSSRNCYTFGLP*RSAPTH
Trigger: ATGTGTTGGAGCAGATCTCCATGGTAAGCCAAAAGT...GTAGCAGTTTCTTGAACTTCTGGCCTGTACTACTAACTGCAGACCTCCAGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR TCA 90 bp AACCTGAGCAAAGGCTTCGTACAGGTTGTTTTCACTGGCAATAATTCAGCCAGGCTGCAATACAGCAGTTaGAACACAACCAGAATTCAC +
Preference number: 4 (lower is better)
Translates to: NLSKGFVQVVFTGNNSARLQYSS*NTTRIH
Trigger: GTGAATTCTGGTTGTGTTTCAACTGCTGTATTGCAG...CCTGGCTGAATTATTGCCAGTGAAAACAACCTGTACGAAGCCTTTGCTCAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS-3UTR TCA 90 bp TACATCATGGGAAAGTACCTCTTTTACAGAATGCAGATCACTGCTAACAATCCACGTCGCCTTTTAGGCTaGGGCTGTTCTGCAATACAG +
Preference number: 4 (lower is better)
Translates to: YIMGKYLFYRMQITANNPRRLLG*GCSAIQ
Trigger: CTGTATTGCAGAACAGCCTCAGCCTAAAAGGCGACG...TGGATTGTTAGCAGTGATCTGCATTCTGTAAAAGAGGTACTTTCCCATGATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR TCA 90 bp AATGTCTACTCCGAAGATGCAAATGTTTTTCCTTGGCAGATCCTCTCTGTGCTTACTGAACAGGTCTCCTaGTCCAACATGAGCTGTATG +
Preference number: 4 (lower is better)
Translates to: NVYSEDANVFPWQILSVLTEQVS*SNMSCM
Trigger: CATACAGCTCATGTTGGATCAGGAGACCTGTTCAGT...AAGCACAGAGAGGATCTGCCAAGGAAAAACATTTGCATCTTCGGAGTAGACATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR TCA 90 bp TTGCTCTTGGCAACTGATGTGGCCCCTAAAATAATATGTAGAGCACAGAAAGGCAATGCAGGATTCGTCTaGCAGTATCTTCTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: LLLATDVAPKIICRAQKGNAGFV*QYLLQS
Trigger: GCTCTGAAGAAGATACTGTCAGACGAATCCTGCATT...GCCTTTCTGTGCTCTACATATTATTTTAGGGGCCACATCAGTTGCCAAGAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS-3UTR TCA 90 bp ACCACTGACTCTGGCTTAACACCACACTCTAACAGAAAAGAAGAAACCTTTACAGACTGGAGGAGAGTATaGCCGCAACACTCAGATACA +
Preference number: 4 (lower is better)
Translates to: TTDSGLTPHSNRKEETFTDWRRV*PQHSDT
Trigger: TGTATCTGAGTGTTGCGGTCATACTCTCCTCCAGTC...TGTAAAGGTTTCTTCTTTTCTGTTAGAGTGTGGTGTTAAGCCAGAGTCAGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS-3UTR TCA 90 bp GCCTACATCATGGGAAAGTACCTCTTTTACAGAATGCAGATCACTGCTAACAATGACTGGAGGAGAGTATaGCCGCAACACTCAGATACA +
Preference number: 4 (lower is better)
Translates to: AYIMGKYLFYRMQITANNDWRRV*PQHSDT
Trigger: TGTATCTGAGTGTTGCGGTCATACTCTCCTCCAGTC...ATTGTTAGCAGTGATCTGCATTCTGTAAAAGAGGTACTTTCCCATGATGTAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR GCA 90 bp GTTTTCTTATTTCTTGATTTTATTGGCACCTCCCAGGCACTTTGGCATGTGCTCGGTCGGTATGTATGTTaGTCTTGGCAACTGATGTGG +
Preference number: 4 (lower is better)
Translates to: VFLFLDFIGTSQALWHVLGRYVC*SWQLMW
Trigger: CCACATCAGTTGCCAAGAGCAACATACATACCGACC...GAGCACATGCCAAAGTGCCTGGGAGGTGCCAATAAAATCAAGAAATAAGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR GCA 90 bp TACATATATTTACTATTATTGGCCTGGCCATGTCTGGCCGTCAGGTCCAGACCCAGGCAAATTCCACAATaGAACATCCACTTGGTGAAT +
Preference number: 4 (lower is better)
Translates to: YIYLLLLAWPCLAVRSRPRQIPQ*NIHLVN
Trigger: ATTCACCAAGTGGATGTTGCATTGTGGAATTTGCCT...GGGTCTGGACCTGACGGCCAGACATGGCCAGGCCAATAATAGTAAATATATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505065.2
CDS-3UTR GCA 90 bp GCCTACATCATGGGAAAGTACCTCTTTTACAGAATGCAGATCACTGCTAACAATATCTGCTCCAACACATaGTGGTCGTTGGAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: AYIMGKYLFYRMQITANNICSNT*WSLEQQ
Trigger: TTGCTGCTCCAACGACCAGCATGTGTTGGAGCAGAT...ATTGTTAGCAGTGATCTGCATTCTGTAAAAGAGGTACTTTCCCATGATGTAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR GCA 90 bp GCCTACATCATGGGAAAGTACCTCTTTTACAGAATGCAGATCACTGCTAACAATCTTACCATGGAGATCTaGTCCAACACATGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: AYIMGKYLFYRMQITANNLTMEI*SNTCWS
Trigger: CGACCAGCATGTGTTGGAGCAGATCTCCATGGTAAG...ATTGTTAGCAGTGATCTGCATTCTGTAAAAGAGGTACTTTCCCATGATGTAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR GCA 90 bp GCTGACAAGTCCACTTTTGGCTTACCATGGAGATCTGCTCCAACACATGCTGGTACCTCTTTTACAGAATaGAGATCACTGCTAACAATC +
Preference number: 4 (lower is better)
Translates to: ADKSTFGLPWRSAPTHAGTSFTE*RSLLTI
Trigger: GATTGTTAGCAGTGATCTGCATTCTGTAAAAGAGGT...ACCAGCATGTGTTGGAGCAGATCTCCATGGTAAGCCAAAAGTGGACTTGTCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CCA 90 bp GACTCTGGAGGTCTGCAGTTAGTAGTACAGGCCAGAAGTTCAAGAAACTGCTACCCGTGTTTTTGTTCCTaGAAGTCAAGTATCTTACAC +
Preference number: 4 (lower is better)
Translates to: DSGGLQLVVQARSSRNCYPCFCS*KSSILH
Trigger: GTGTAAGATACTTGACTTCCAGGAACAAAAACACGG...GTAGCAGTTTCTTGAACTTCTGGCCTGTACTACTAACTGCAGACCTCCAGAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS-3UTR CCA 90 bp GTTGTTTTCACTGGCAATAATTCAGCCAGGTCGGTATGTATGTTGCTCTTGGCACTCCATAACCTCCCTTaGACTGCATTTGGTTCTGAA +
Preference number: 4 (lower is better)
Translates to: VVFTGNNSARSVCMLLLALHNLP*TAFGSE
Trigger: TTCAGAACCAAATGCAGTCCAAGGGAGGTTATGGAG...TGCCAAGAGCAACATACATACCGACCTGGCTGAATTATTGCCAGTGAAAACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS-3UTR CCA 90 bp TACATCATGGGAAAGTACCTCTTTTACAGAATGCAGATCACTGCTAACAATCCAGCTGCATCTGGACATTaGCAGGCATTCCACCTCCAT +
Preference number: 4 (lower is better)
Translates to: YIMGKYLFYRMQITANNPAASGH*QAFHLH
Trigger: ATGGAGGTGGAATGCCTGCCAATGTCCAGATGCAGC...TGGATTGTTAGCAGTGATCTGCATTCTGTAAAAGAGGTACTTTCCCATGATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CCA 90 bp GTTGTTTTCACTGGCAATAATTCAGCCAGGTCGGTATGTATGTTGCTCTTGGCATATGTATGTTGCTCTTaGCAACTGATGTGGCCCCTA +
Preference number: 4 (lower is better)
Translates to: VVFTGNNSARSVCMLLLAYVCCS*QLMWPL
Trigger: TAGGGGCCACATCAGTTGCCAAGAGCAACATACATA...TGCCAAGAGCAACATACATACCGACCTGGCTGAATTATTGCCAGTGAAAACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS-3UTR CCA 90 bp ACACAAACCACTGACTCTGGCTTAACACCACACTCTAACAGAAAAGAAGAAACCTGCTCCAACACATGCTaGTCGTTGGAGCAGCAAAAA +
Preference number: 4 (lower is better)
Translates to: TQTTDSGLTPHSNRKEETCSNTC*SLEQQK
Trigger: TTTTTGCTGCTCCAACGACCAGCATGTGTTGGAGCA...GGTTTCTTCTTTTCTGTTAGAGTGTGGTGTTAAGCCAGAGTCAGTGGTTTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CCA 90 bp ACACAAACCACTGACTCTGGCTTAACACCACACTCTAACAGAAAAGAAGAAACCACCTCCCAGGCACTTTaGCATGTGCTCCTGTATAAA +
Preference number: 4 (lower is better)
Translates to: TQTTDSGLTPHSNRKEETTSQAL*HVLLYK
Trigger: TTTATACAGGAGCACATGCCAAAGTGCCTGGGAGGT...GGTTTCTTCTTTTCTGTTAGAGTGTGGTGTTAAGCCAGAGTCAGTGGTTTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CCA 90 bp GCTGACAAGTCCACTTTTGGCTTACCATGGAGATCTGCTCCAACACATGCTGGTTTCATGCCTACATCATaGGAAAGTACCTCTTTTACA +
Preference number: 4 (lower is better)
Translates to: ADKSTFGLPWRSAPTHAGFMPTS*ESTSFT
Trigger: TGTAAAAGAGGTACTTTCCCATGATGTAGGCATGAA...ACCAGCATGTGTTGGAGCAGATCTCCATGGTAAGCCAAAAGTGGACTTGTCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CCA 90 bp TACATCATGGGAAAGTACCTCTTTTACAGAATGCAGATCACTGCTAACAATCCACCGCTCTACGCTTACTaGCACCACTTCATGCCTACA +
Preference number: 4 (lower is better)
Translates to: YIMGKYLFYRMQITANNPPLYAY*HHFMPT
Trigger: TGTAGGCATGAAGTGGTGCCAGTAAGCGTAGAGCGG...TGGATTGTTAGCAGTGATCTGCATTCTGTAAAAGAGGTACTTTCCCATGATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CCA 90 bp ACAAATGACCTCTTGAGATTTACAACCCCCTTTATAAAAGTGGGAAAGCTGCCTGCTCTGAGTACTCACTaGAGAAAGGACCAGGGCTAT +
Preference number: 4 (lower is better)
Translates to: TNDLLRFTTPFIKVGKLPALSTH*RKDQGY
Trigger: ATAGCCCTGGTCCTTTCTCCAGTGAGTACTCAGAGC...AGGCAGCTTTCCCACTTTTATAAAGGGGGTTGTAAATCTCAAGAGGTCATTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505065.2
CDS-3UTR CCA 90 bp ACAAATGACCTCTTGAGATTTACAACCCCCTTTATAAAAGTGGGAAAGCTGCCTTTACTATTATTGGCCTaGCCATGTCTGGCCGTCAGG +
Preference number: 4 (lower is better)
Translates to: TNDLLRFTTPFIKVGKLPLLLLA*PCLAVR
Trigger: CCTGACGGCCAGACATGGCCAGGCCAATAATAGTAA...AGGCAGCTTTCCCACTTTTATAAAGGGGGTTGTAAATCTCAAGAGGTCATTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505065.2
CDS-3UTR TCA 90 bp GTTTTCTTATTTCTTGATTTTATTGGCACCTCCCAGGCACTTTGGCATGTGCTCACAGTCCACAGTAAATaGGCACCAATGAAGGTTCCA +
Preference number: 4 (lower is better)
Translates to: VFLFLDFIGTSQALWHVLTVHSK*APMKVP
Trigger: TGGAACCTTCATTGGTGCTCATTTACTGTGGACTGT...GAGCACATGCCAAAGTGCCTGGGAGGTGCCAATAAAATCAAGAAATAAGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR TCA 90 bp TTGCTCTTGGCAACTGATGTGGCCCCTAAAATAATATGTAGAGCACAGAAAGGCTCTCCTGATCCAACATaGGCTGTATGCACAAAGTTT +
Preference number: 4 (lower is better)
Translates to: LLLATDVAPKIICRAQKGSPDPT*AVCTKF
Trigger: AAACTTTGTGCATACAGCTCATGTTGGATCAGGAGA...GCCTTTCTGTGCTCTACATATTATTTTAGGGGCCACATCAGTTGCCAAGAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS-3UTR TCA 90 bp GTTGTTTTCACTGGCAATAATTCAGCCAGGTCGGTATGTATGTTGCTCTTGGCATCTCCTGATCCAACATaGGCTGTATGCACAAAGTTT +
Preference number: 4 (lower is better)
Translates to: VVFTGNNSARSVCMLLLASPDPT*AVCTKF
Trigger: AAACTTTGTGCATACAGCTCATGTTGGATCAGGAGA...TGCCAAGAGCAACATACATACCGACCTGGCTGAATTATTGCCAGTGAAAACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS-3UTR TCA 90 bp ACCACTGACTCTGGCTTAACACCACACTCTAACAGAAAAGAAGAAACCTTTACAACTGAACAGGTCTCCTaGTCCAACATGAGCTGTATG +
Preference number: 4 (lower is better)
Translates to: TTDSGLTPHSNRKEETFTTEQVS*SNMSCM
Trigger: CATACAGCTCATGTTGGATCAGGAGACCTGTTCAGT...TGTAAAGGTTTCTTCTTTTCTGTTAGAGTGTGGTGTTAAGCCAGAGTCAGTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS-3UTR TCA 90 bp CTGAGCAGAATGACAACAGTACTCAGGCAAATTCCACAATGCAACATCCACTTGGACTGCATTTGGTTCTaGATGGAGCTAACTGAATTC +
Preference number: 4 (lower is better)
Translates to: LSRMTTVLRQIPQCNIHLDCIWF*MELTEF
Trigger: GAATTCAGTTAGCTCCATTCAGAACCAAATGCAGTC...CAAGTGGATGTTGCATTGTGGAATTTGCCTGAGTACTGTTGTCATTCTGCTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR TCA 90 bp ACACAAACCACTGACTCTGGCTTAACACCACACTCTAACAGAAAAGAAGAAACCAATGCAGGATTCGTCTaGCAGTATCTTCTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: TQTTDSGLTPHSNRKEETNAGFV*QYLLQS
Trigger: GCTCTGAAGAAGATACTGTCAGACGAATCCTGCATT...GGTTTCTTCTTTTCTGTTAGAGTGTGGTGTTAAGCCAGAGTCAGTGGTTTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS-3UTR TCA 90 bp TTGCTCTTGGCAACTGATGTGGCCCCTAAAATAATATGTAGAGCACAGAAAGGCACATATTTTAGAACCTaGGCAAAGGCTTCGTACAGG +
Preference number: 4 (lower is better)
Translates to: LLLATDVAPKIICRAQKGTYFRT*AKASYR
Trigger: CCTGTACGAAGCCTTTGCTCAGGTTCTAAAATATGT...GCCTTTCTGTGCTCTACATATTATTTTAGGGGCCACATCAGTTGCCAAGAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS-3UTR TCA 90 bp GTTGTTTTCACTGGCAATAATTCAGCCAGGTCGGTATGTATGTTGCTCTTGGCAACATATTTTAGAACCTaGGCAAAGGCTTCGTACAGG +
Preference number: 4 (lower is better)
Translates to: VVFTGNNSARSVCMLLLATYFRT*AKASYR
Trigger: CCTGTACGAAGCCTTTGCTCAGGTTCTAAAATATGT...TGCCAAGAGCAACATACATACCGACCTGGCTGAATTATTGCCAGTGAAAACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS-3UTR TCA 90 bp GCCTACATCATGGGAAAGTACCTCTTTTACAGAATGCAGATCACTGCTAACAATCTCTGTGCTTGGGATTaGCACAAAGGCTCAAAACTG +
Preference number: 4 (lower is better)
Translates to: AYIMGKYLFYRMQITANNLCAWD*HKGSKL
Trigger: CAGTTTTGAGCCTTTGTGTCAATCCCAAGCACAGAG...ATTGTTAGCAGTGATCTGCATTCTGTAAAAGAGGTACTTTCCCATGATGTAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR TCA 90 bp ACAAATGACCTCTTGAGATTTACAACCCCCTTTATAAAAGTGGGAAAGCTGCCTCTCTGTGCTTGGGATTaGCACAAAGGCTCAAAACTG +
Preference number: 4 (lower is better)
Translates to: TNDLLRFTTPFIKVGKLPLCAWD*HKGSKL
Trigger: CAGTTTTGAGCCTTTGTGTCAATCCCAAGCACAGAG...AGGCAGCTTTCCCACTTTTATAAAGGGGGTTGTAAATCTCAAGAGGTCATTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR TCA 90 bp GTTGTTTTCACTGGCAATAATTCAGCCAGGTCGGTATGTATGTTGCTCTTGGCAAGAGTAGTTATAGGCTaGCAAGTCCACTTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: VVFTGNNSARSVCMLLLARVVIG*QVHFWL
Trigger: AAGCCAAAAGTGGACTTGTCAGCCTATAACTACTCT...TGCCAAGAGCAACATACATACCGACCTGGCTGAATTATTGCCAGTGAAAACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR GCA 90 bp AATGTCTACTCCGAAGATGCAAATGTTTTTCCTTGGCAGATCCTCTCTGTGCTTAGGCTGAGGCTGTTCTaGAATACAGCAGTTGAAACA +
Preference number: 4 (lower is better)
Translates to: NVYSEDANVFPWQILSVLRLRLF*NTAVET
Trigger: TGTTTCAACTGCTGTATTGCAGAACAGCCTCAGCCT...AAGCACAGAGAGGATCTGCCAAGGAAAAACATTTGCATCTTCGGAGTAGACATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR GCA 90 bp GACTCTGGAGGTCTGCAGTTAGTAGTACAGGCCAGAAGTTCAAGAAACTGCTACAGAAGTTCAAGAAACTaGTACTGGAAACAACTGGAT +
Preference number: 4 (lower is better)
Translates to: DSGGLQLVVQARSSRNCYRSSRN*YWKQLD
Trigger: ATCCAGTTGTTTCCAGTAGCAGTTTCTTGAACTTCT...GTAGCAGTTTCTTGAACTTCTGGCCTGTACTACTAACTGCAGACCTCCAGAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS-3UTR GCA 90 bp ACCACTGACTCTGGCTTAACACCACACTCTAACAGAAAAGAAGAAACCTTTACAGATCAAGTAATCTGGTaGCCCGCTGTACTGGGTAAA +
Preference number: 4 (lower is better)
Translates to: TTDSGLTPHSNRKEETFTDQVIW*PAVLGK
Trigger: TTTACCCAGTACAGCGGGGCACCAGATTACTTGATC...TGTAAAGGTTTCTTCTTTTCTGTTAGAGTGTGGTGTTAAGCCAGAGTCAGTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR GCA 90 bp ACAAATGACCTCTTGAGATTTACAACCCCCTTTATAAAAGTGGGAAAGCTGCCTGATCAAGTAATCTGGTaGCCCGCTGTACTGGGTAAA +
Preference number: 4 (lower is better)
Translates to: TNDLLRFTTPFIKVGKLPDQVIW*PAVLGK
Trigger: TTTACCCAGTACAGCGGGGCACCAGATTACTTGATC...AGGCAGCTTTCCCACTTTTATAAAGGGGGTTGTAAATCTCAAGAGGTCATTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR GCA 90 bp TACATCATGGGAAAGTACCTCTTTTACAGAATGCAGATCACTGCTAACAATCCACTTACCATGGAGATCTaGTCCAACACATGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: YIMGKYLFYRMQITANNPLTMEI*SNTCWS
Trigger: CGACCAGCATGTGTTGGAGCAGATCTCCATGGTAAG...TGGATTGTTAGCAGTGATCTGCATTCTGTAAAAGAGGTACTTTCCCATGATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR GCA 90 bp ATGTTTGTTCAGTTGCCTGTTTTGCAAGAATCTTGGACTAAGGTAAATGAAGGCCTTACCATGGAGATCTaGTCCAACACATGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: MFVQLPVLQESWTKVNEGLTMEI*SNTCWS
Trigger: CGACCAGCATGTGTTGGAGCAGATCTCCATGGTAAG...GCCTTCATTTACCTTAGTCCAAGATTCTTGCAAAACAGGCAACTGAACAAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR GCA 90 bp AATGTCTACTCCGAAGATGCAAATGTTTTTCCTTGGCAGATCCTCTCTGTGCTTACTGGCACCACTTCATaGCTACATCATGGGAAAGTA +
Preference number: 4 (lower is better)
Translates to: NVYSEDANVFPWQILSVLTGTTS*LHHGKV
Trigger: TACTTTCCCATGATGTAGGCATGAAGTGGTGCCAGT...AAGCACAGAGAGGATCTGCCAAGGAAAAACATTTGCATCTTCGGAGTAGACATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CCA 90 bp GACTCTGGAGGTCTGCAGTTAGTAGTACAGGCCAGAAGTTCAAGAAACTGCTACAGATTTCTTCTCATTTaGGTTCCAGGTTTCACTCAA +
Preference number: 4 (lower is better)
Translates to: DSGGLQLVVQARSSRNCYRFLLI*VPGFTQ
Trigger: TTGAGTGAAACCTGGAACCCAAATGAGAAGAAATCT...GTAGCAGTTTCTTGAACTTCTGGCCTGTACTACTAACTGCAGACCTCCAGAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000503291.5
ENST00000505065.2
CDS-3UTR CCA 90 bp GTTTTCTTATTTCTTGATTTTATTGGCACCTCCCAGGCACTTTGGCATGTGCTCGTCACTCCTCAGCAATaGAGTAACACATTCAGCTAC +
Preference number: 4 (lower is better)
Translates to: VFLFLDFIGTSQALWHVLVTPQQ*SNTFSY
Trigger: GTAGCTGAATGTGTTACTCCATTGCTGAGGAGTGAC...GAGCACATGCCAAAGTGCCTGGGAGGTGCCAATAAAATCAAGAAATAAGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360515.7
ENST00000505065.2
CDS-3UTR CCA 90 bp CATAACCACACCTGTAACCACACCTGTTTACAACCACAGGTCCTTGCTCTCAAACCGTGTTTTTGTTCCTaGAAGTCAAGTATCTTACAC +
Preference number: 4 (lower is better)
Translates to: HNHTCNHTCLQPQVLALKPCFCS*KSSILH
Trigger: GTGTAAGATACTTGACTTCCAGGAACAAAAACACGG...TTTGAGAGCAAGGACCTGTGGTTGTAAACAGGTGTGGTTACAGGTGTGGTTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS-3UTR CCA 90 bp AACCTGAGCAAAGGCTTCGTACAGGTTGTTTTCACTGGCAATAATTCAGCCAGGTATGCACAAAGTTTGTaGGCTCTCCAATCATACTTC +
Preference number: 4 (lower is better)
Translates to: NLSKGFVQVVFTGNNSARYAQSL*ALQSYF
Trigger: GAAGTATGATTGGAGAGCCCACAAACTTTGTGCATA...CCTGGCTGAATTATTGCCAGTGAAAACAACCTGTACGAAGCCTTTGCTCAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS-3UTR CCA 90 bp GTTTTCTTATTTCTTGATTTTATTGGCACCTCCCAGGCACTTTGGCATGTGCTCTATGTATGTTGCTCTTaGCAACTGATGTGGCCCCTA +
Preference number: 4 (lower is better)
Translates to: VFLFLDFIGTSQALWHVLYVCCS*QLMWPL
Trigger: TAGGGGCCACATCAGTTGCCAAGAGCAACATACATA...GAGCACATGCCAAAGTGCCTGGGAGGTGCCAATAAAATCAAGAAATAAGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CCA 90 bp ACCACTGACTCTGGCTTAACACCACACTCTAACAGAAAAGAAGAAACCTTTACAACCTCCCAGGCACTTTaGCATGTGCTCCTGTATAAA +
Preference number: 4 (lower is better)
Translates to: TTDSGLTPHSNRKEETFTTSQAL*HVLLYK
Trigger: TTTATACAGGAGCACATGCCAAAGTGCCTGGGAGGT...TGTAAAGGTTTCTTCTTTTCTGTTAGAGTGTGGTGTTAAGCCAGAGTCAGTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CCA 90 bp GTTGTTTTCACTGGCAATAATTCAGCCAGGTCGGTATGTATGTTGCTCTTGGCATATATTTACTATTATTaGCCTGGCCATGTCTGGCCG +
Preference number: 4 (lower is better)
Translates to: VVFTGNNSARSVCMLLLAYIYYY*PGHVWP
Trigger: CGGCCAGACATGGCCAGGCCAATAATAGTAAATATA...TGCCAAGAGCAACATACATACCGACCTGGCTGAATTATTGCCAGTGAAAACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505065.2
3UTR CAA 72 bp TTCACTGGCAATAATTCAGCCAGGTCGGTATGTATGTaGCTCTTGGCAACTGATGTGGCCCCTAAAATAATA +
Preference number: 4 (lower is better)
Translates to: FTGNNSARSVCM*LLATDVAPKII
Trigger: TATTATTTTAGGGGCCACATCAGTTGCCAAGAGCAACATACATACCGACCTGGCTGAATTATTGCCAGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS-3UTR TCA 90 bp ACCACTGACTCTGGCTTAACACCACACTCTAACAGAAAAGAAGAAACCTTTACAACAGTCCACAGTAAATaGGCACCAATGAAGGTTCCA +
Preference number: 4 (lower is better)
Translates to: TTDSGLTPHSNRKEETFTTVHSK*APMKVP
Trigger: TGGAACCTTCATTGGTGCTCATTTACTGTGGACTGT...TGTAAAGGTTTCTTCTTTTCTGTTAGAGTGTGGTGTTAAGCCAGAGTCAGTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS-3UTR TCA 90 bp CAAACCACTGACTCTGGCTTAACACCACACTCTAACAGAAAAGAAGAAACCTTTACAGTCCACAGTAAATaGGCACCAATGAAGGTTCCA +
Preference number: 4 (lower is better)
Translates to: QTTDSGLTPHSNRKEETFTVHSK*APMKVP
Trigger: TGGAACCTTCATTGGTGCTCATTTACTGTGGACTGT...AAAGGTTTCTTCTTTTCTGTTAGAGTGTGGTGTTAAGCCAGAGTCAGTGGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS-3UTR TCA 90 bp GTTTTCTTATTTCTTGATTTTATTGGCACCTCCCAGGCACTTTGGCATGTGCTCCTGCAATACAGCAGTTaGAACACAACCAGAATTCAC +
Preference number: 4 (lower is better)
Translates to: VFLFLDFIGTSQALWHVLLQYSS*NTTRIH
Trigger: GTGAATTCTGGTTGTGTTTCAACTGCTGTATTGCAG...GAGCACATGCCAAAGTGCCTGGGAGGTGCCAATAAAATCAAGAAATAAGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR TCA 90 bp ACTGATAATGCTGCACTGGAAATGCTAAACCCAATGTTAACTAAAGTCAACATTCGTCGCCTTTTAGGCTaGGGCTGTTCTGCAATACAG +
Preference number: 4 (lower is better)
Translates to: TDNAALEMLNPMLTKVNIRRLLG*GCSAIQ
Trigger: CTGTATTGCAGAACAGCCTCAGCCTAAAAGGCGACG...AATGTTGACTTTAGTTAACATTGGGTTTAGCATTTCCAGTGCAGCATTATCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR TCA 90 bp GTTTTCTTATTTCTTGATTTTATTGGCACCTCCCAGGCACTTTGGCATGTGCTCTCTCCTGATCCAACATaGGCTGTATGCACAAAGTTT +
Preference number: 4 (lower is better)
Translates to: VFLFLDFIGTSQALWHVLSPDPT*AVCTKF
Trigger: AAACTTTGTGCATACAGCTCATGTTGGATCAGGAGA...GAGCACATGCCAAAGTGCCTGGGAGGTGCCAATAAAATCAAGAAATAAGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR TCA 90 bp AATGTCTACTCCGAAGATGCAAATGTTTTTCCTTGGCAGATCCTCTCTGTGCTTACATATTTTAGAACCTaGGCAAAGGCTTCGTACAGG +
Preference number: 4 (lower is better)
Translates to: NVYSEDANVFPWQILSVLTYFRT*AKASYR
Trigger: CCTGTACGAAGCCTTTGCTCAGGTTCTAAAATATGT...AAGCACAGAGAGGATCTGCCAAGGAAAAACATTTGCATCTTCGGAGTAGACATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR TCA 90 bp GTTGTTTTCACTGGCAATAATTCAGCCAGGTCGGTATGTATGTTGCTCTTGGCACACTTGGTGAATCAGTaGCAATGGATGAATTCAACT +
Preference number: 4 (lower is better)
Translates to: VVFTGNNSARSVCMLLLAHLVNQ*QWMNST
Trigger: AGTTGAATTCATCCATTGTCACTGATTCACCAAGTG...TGCCAAGAGCAACATACATACCGACCTGGCTGAATTATTGCCAGTGAAAACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR TCA 90 bp TTGCTCTTGGCAACTGATGTGGCCCCTAAAATAATATGTAGAGCACAGAAAGGCCACTTGGTGAATCAGTaGCAATGGATGAATTCAACT +
Preference number: 4 (lower is better)
Translates to: LLLATDVAPKIICRAQKGHLVNQ*QWMNST
Trigger: AGTTGAATTCATCCATTGTCACTGATTCACCAAGTG...GCCTTTCTGTGCTCTACATATTATTTTAGGGGCCACATCAGTTGCCAAGAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR TCA 90 bp GTTGTTTTCACTGGCAATAATTCAGCCAGGTCGGTATGTATGTTGCTCTTGGCAGAACAAATGACCTCTTaGGATTTACAACCCCCTTTA +
Preference number: 4 (lower is better)
Translates to: VVFTGNNSARSVCMLLLAEQMTS*DLQPPL
Trigger: TAAAGGGGGTTGTAAATCTCAAGAGGTCATTTGTTC...TGCCAAGAGCAACATACATACCGACCTGGCTGAATTATTGCCAGTGAAAACAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR TCA 90 bp TTGCTCTTGGCAACTGATGTGGCCCCTAAAATAATATGTAGAGCACAGAAAGGCGAACAAATGACCTCTTaGGATTTACAACCCCCTTTA +
Preference number: 4 (lower is better)
Translates to: LLLATDVAPKIICRAQKGEQMTS*DLQPPL
Trigger: TAAAGGGGGTTGTAAATCTCAAGAGGTCATTTGTTC...GCCTTTCTGTGCTCTACATATTATTTTAGGGGCCACATCAGTTGCCAAGAGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR GCA 90 bp GCCTACATCATGGGAAAGTACCTCTTTTACAGAATGCAGATCACTGCTAACAATAGGCTGAGGCTGTTCTaGAATACAGCAGTTGAAACA +
Preference number: 4 (lower is better)
Translates to: AYIMGKYLFYRMQITANNRLRLF*NTAVET
Trigger: TGTTTCAACTGCTGTATTGCAGAACAGCCTCAGCCT...ATTGTTAGCAGTGATCTGCATTCTGTAAAAGAGGTACTTTCCCATGATGTAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR GCA 90 bp AATGTCTACTCCGAAGATGCAAATGTTTTTCCTTGGCAGATCCTCTCTGTGCTTAGGCACTTTGGCATGTaGTCCTGTATAAAGTGTAGT +
Preference number: 4 (lower is better)
Translates to: NVYSEDANVFPWQILSVLRHFGM*SCIKCS
Trigger: ACTACACTTTATACAGGAGCACATGCCAAAGTGCCT...AAGCACAGAGAGGATCTGCCAAGGAAAAACATTTGCATCTTCGGAGTAGACATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR GCA 90 bp ACACAAACCACTGACTCTGGCTTAACACCACACTCTAACAGAAAAGAAGAAACCAGGCACTTTGGCATGTaGTCCTGTATAAAGTGTAGT +
Preference number: 4 (lower is better)
Translates to: TQTTDSGLTPHSNRKEETRHFGM*SCIKCS
Trigger: ACTACACTTTATACAGGAGCACATGCCAAAGTGCCT...GGTTTCTTCTTTTCTGTTAGAGTGTGGTGTTAAGCCAGAGTCAGTGGTTTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR GCA 90 bp ACAAATGACCTCTTGAGATTTACAACCCCCTTTATAAAAGTGGGAAAGCTGCCTACTGGCACCACTTCATaGCTACATCATGGGAAAGTA +
Preference number: 4 (lower is better)
Translates to: TNDLLRFTTPFIKVGKLPTGTTS*LHHGKV
Trigger: TACTTTCCCATGATGTAGGCATGAAGTGGTGCCAGT...AGGCAGCTTTCCCACTTTTATAAAGGGGGTTGTAAATCTCAAGAGGTCATTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CCA 90 bp CTGAGCAGAATGACAACAGTACTCAGGCAAATTCCACAATGCAACATCCACTTGCCGTGTTTTTGTTCCTaGAAGTCAAGTATCTTACAC +
Preference number: 4 (lower is better)
Translates to: LSRMTTVLRQIPQCNIHLPCFCS*KSSILH
Trigger: GTGTAAGATACTTGACTTCCAGGAACAAAAACACGG...CAAGTGGATGTTGCATTGTGGAATTTGCCTGAGTACTGTTGTCATTCTGCTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CCA 90 bp ATGTTTGTTCAGTTGCCTGTTTTGCAAGAATCTTGGACTAAGGTAAATGAAGGCATAATCACGACAGGGTaGACAAGGTGCCATCACACT +
Preference number: 4 (lower is better)
Translates to: MFVQLPVLQESWTKVNEGIITTG*TRCHHT
Trigger: AGTGTGATGGCACCTTGTCCACCCTGTCGTGATTAT...GCCTTCATTTACCTTAGTCCAAGATTCTTGCAAAACAGGCAACTGAACAAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CCA 90 bp TACATCATGGGAAAGTACCTCTTTTACAGAATGCAGATCACTGCTAACAATCCAAAAGATCAAGTAATCTaGTGCCCCGCTGTACTGGGT +
Preference number: 4 (lower is better)
Translates to: YIMGKYLFYRMQITANNPKDQVI*CPAVLG
Trigger: ACCCAGTACAGCGGGGCACCAGATTACTTGATCTTT...TGGATTGTTAGCAGTGATCTGCATTCTGTAAAAGAGGTACTTTCCCATGATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CCA 90 bp ATGTTTGTTCAGTTGCCTGTTTTGCAAGAATCTTGGACTAAGGTAAATGAAGGCTGCTCCAACACATGCTaGTCGTTGGAGCAGCAAAAA +
Preference number: 4 (lower is better)
Translates to: MFVQLPVLQESWTKVNEGCSNTC*SLEQQK
Trigger: TTTTTGCTGCTCCAACGACCAGCATGTGTTGGAGCA...GCCTTCATTTACCTTAGTCCAAGATTCTTGCAAAACAGGCAACTGAACAAACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR TCA 90 bp TTGCTCTTGGCAACTGATGTGGCCCCTAAAATAATATGTAGAGCACAGAAAGGCTACGATGATGTCCAGTaGTGCCAAGATGAAATTTTA +
Preference number: 4 (lower is better)
Translates to: LLLATDVAPKIICRAQKGYDDVQ*CQDEIL
Trigger: TAAAATTTCATCTTGGCATCACTGGACATCATCGTA...GCCTTTCTGTGCTCTACATATTATTTTAGGGGCCACATCAGTTGCCAAGAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS-3UTR TCA 90 bp GTTGTTTTCACTGGCAATAATTCAGCCAGGTCGGTATGTATGTTGCTCTTGGCATACGATGATGTCCAGTaGTGCCAAGATGAAATTTTA +
Preference number: 4 (lower is better)
Translates to: VVFTGNNSARSVCMLLLAYDDVQ*CQDEIL
Trigger: TAAAATTTCATCTTGGCATCACTGGACATCATCGTA...TGCCAAGAGCAACATACATACCGACCTGGCTGAATTATTGCCAGTGAAAACAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS-3UTR TCA 90 bp GTTTTCTTATTTCTTGATTTTATTGGCACCTCCCAGGCACTTTGGCATGTGCTCGTAAATGAGCACCAATaGAGGTTCCAAATCTCAACT +
Preference number: 4 (lower is better)
Translates to: VFLFLDFIGTSQALWHVLVNEHQ*RFQIST
Trigger: AGTTGAGATTTGGAACCTTCATTGGTGCTCATTTAC...GAGCACATGCCAAAGTGCCTGGGAGGTGCCAATAAAATCAAGAAATAAGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR TCA 90 bp GCCTACATCATGGGAAAGTACCTCTTTTACAGAATGCAGATCACTGCTAACAATCTGCAATACAGCAGTTaGAACACAACCAGAATTCAC +
Preference number: 4 (lower is better)
Translates to: AYIMGKYLFYRMQITANNLQYSS*NTTRIH
Trigger: GTGAATTCTGGTTGTGTTTCAACTGCTGTATTGCAG...ATTGTTAGCAGTGATCTGCATTCTGTAAAAGAGGTACTTTCCCATGATGTAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR TCA 90 bp ACAAATGACCTCTTGAGATTTACAACCCCCTTTATAAAAGTGGGAAAGCTGCCTGACTGCATTTGGTTCTaGATGGAGCTAACTGAATTC +
Preference number: 4 (lower is better)
Translates to: TNDLLRFTTPFIKVGKLPDCIWF*MELTEF
Trigger: GAATTCAGTTAGCTCCATTCAGAACCAAATGCAGTC...AGGCAGCTTTCCCACTTTTATAAAGGGGGTTGTAAATCTCAAGAGGTCATTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR TCA 90 bp CAAACCACTGACTCTGGCTTAACACCACACTCTAACAGAAAAGAAGAAACCTTTGACTGCATTTGGTTCTaGATGGAGCTAACTGAATTC +
Preference number: 4 (lower is better)
Translates to: QTTDSGLTPHSNRKEETFDCIWF*MELTEF
Trigger: GAATTCAGTTAGCTCCATTCAGAACCAAATGCAGTC...AAAGGTTTCTTCTTTTCTGTTAGAGTGTGGTGTTAAGCCAGAGTCAGTGGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS-3UTR TCA 90 bp AATGTCTACTCCGAAGATGCAAATGTTTTTCCTTGGCAGATCCTCTCTGTGCTTGAACAAATGACCTCTTaGGATTTACAACCCCCTTTA +
Preference number: 4 (lower is better)
Translates to: NVYSEDANVFPWQILSVLEQMTS*DLQPPL
Trigger: TAAAGGGGGTTGTAAATCTCAAGAGGTCATTTGTTC...AAGCACAGAGAGGATCTGCCAAGGAAAAACATTTGCATCTTCGGAGTAGACATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR TCA 90 bp GCCTACATCATGGGAAAGTACCTCTTTTACAGAATGCAGATCACTGCTAACAATGCTATGGGGAACAAATaGCCTCTTGAGATTTACAAC +
Preference number: 4 (lower is better)
Translates to: AYIMGKYLFYRMQITANNAMGNK*PLEIYN
Trigger: GTTGTAAATCTCAAGAGGTCATTTGTTCCCCATAGC...ATTGTTAGCAGTGATCTGCATTCTGTAAAAGAGGTACTTTCCCATGATGTAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR GCA 90 bp TCTTTTACAGAATGCAGATCACTGCTAACAATCCACATGACTAAGTCTTCAGTTGATCAAGTAATCTGGTaGCCCGCTGTACTGGGTAAA +
Preference number: 4 (lower is better)
Translates to: SFTECRSLLTIHMTKSSVDQVIW*PAVLGK
Trigger: TTTACCCAGTACAGCGGGGCACCAGATTACTTGATC...AACTGAAGACTTAGTCATGTGGATTGTTAGCAGTGATCTGCATTCTGTAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CCA 90 bp AATGTCTACTCCGAAGATGCAAATGTTTTTCCTTGGCAGATCCTCTCTGTGCTTTATGCACAAAGTTTGTaGGCTCTCCAATCATACTTC +
Preference number: 4 (lower is better)
Translates to: NVYSEDANVFPWQILSVLYAQSL*ALQSYF
Trigger: GAAGTATGATTGGAGAGCCCACAAACTTTGTGCATA...AAGCACAGAGAGGATCTGCCAAGGAAAAACATTTGCATCTTCGGAGTAGACATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CCA 90 bp ACTGATAATGCTGCACTGGAAATGCTAAACCCAATGTTAACTAAAGTCAACATTGGTGCCATCACACTTTaGAGAAAGGACCAGGGCTAT +
Preference number: 4 (lower is better)
Translates to: TDNAALEMLNPMLTKVNIGAITL*RKDQGY
Trigger: ATAGCCCTGGTCCTTTCTCCAAAGTGTGATGGCACC...AATGTTGACTTTAGTTAACATTGGGTTTAGCATTTCCAGTGCAGCATTATCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360515.7
ENST00000395246.5
CDS-3UTR CCA 90 bp GTTTTCTTATTTCTTGATTTTATTGGCACCTCCCAGGCACTTTGGCATGTGCTCAGAAATGTTAATTTCTaGCATCCCATGGGCTCTTAC +
Preference number: 4 (lower is better)
Translates to: VFLFLDFIGTSQALWHVLRNVNF*HPMGSY
Trigger: GTAAGAGCCCATGGGATGCCAGAAATTAACATTTCT...GAGCACATGCCAAAGTGCCTGGGAGGTGCCAATAAAATCAAGAAATAAGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CCA 90 bp ACTGATAATGCTGCACTGGAAATGCTAAACCCAATGTTAACTAAAGTCAACATTGAAACTGACCGTGCCTaGCTGAGCAGAATGACAACA +
Preference number: 4 (lower is better)
Translates to: TDNAALEMLNPMLTKVNIETDRA*LSRMTT
Trigger: TGTTGTCATTCTGCTCAGCCAGGCACGGTCAGTTTC...AATGTTGACTTTAGTTAACATTGGGTTTAGCATTTCCAGTGCAGCATTATCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CCA 90 bp GCCTACATCATGGGAAAGTACCTCTTTTACAGAATGCAGATCACTGCTAACAATACTTTTGGCTTACCATaGAGATCTGCTCCAACACAT +
Preference number: 4 (lower is better)
Translates to: AYIMGKYLFYRMQITANNTFGLP*RSAPTH
Trigger: ATGTGTTGGAGCAGATCTCCATGGTAAGCCAAAAGT...ATTGTTAGCAGTGATCTGCATTCTGTAAAAGAGGTACTTTCCCATGATGTAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR TCA 90 bp CAAACCACTGACTCTGGCTTAACACCACACTCTAACAGAAAAGAAGAAACCTTTGTAAATGAGCACCAATaGAGGTTCCAAATCTCAACT +
Preference number: 4 (lower is better)
Translates to: QTTDSGLTPHSNRKEETFVNEHQ*RFQIST
Trigger: AGTTGAGATTTGGAACCTTCATTGGTGCTCATTTAC...AAAGGTTTCTTCTTTTCTGTTAGAGTGTGGTGTTAAGCCAGAGTCAGTGGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS-3UTR TCA 90 bp ACTGATAATGCTGCACTGGAAATGCTAAACCCAATGTTAACTAAAGTCAACATTACTGAACAGGTCTCCTaGTCCAACATGAGCTGTATG +
Preference number: 4 (lower is better)
Translates to: TDNAALEMLNPMLTKVNITEQVS*SNMSCM
Trigger: CATACAGCTCATGTTGGATCAGGAGACCTGTTCAGT...AATGTTGACTTTAGTTAACATTGGGTTTAGCATTTCCAGTGCAGCATTATCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR GCA 90 bp ACACAAACCACTGACTCTGGCTTAACACCACACTCTAACAGAAAAGAAGAAACCAGAAGTTCAAGAAACTaGTACTGGAAACAACTGGAT +
Preference number: 4 (lower is better)
Translates to: TQTTDSGLTPHSNRKEETRSSRN*YWKQLD
Trigger: ATCCAGTTGTTTCCAGTAGCAGTTTCTTGAACTTCT...GGTTTCTTCTTTTCTGTTAGAGTGTGGTGTTAAGCCAGAGTCAGTGGTTTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS-3UTR GCA 90 bp GTTGTTTTCACTGGCAATAATTCAGCCAGGTCGGTATGTATGTTGCTCTTGGCAGTCTTCAGTTTCCCTTaGTTAACATTTGTTAGCATA +
Preference number: 4 (lower is better)
Translates to: VVFTGNNSARSVCMLLLAVFSFP*LTFVSI
Trigger: TATGCTAACAAATGTTAAGCAAGGGAAACTGAAGAC...TGCCAAGAGCAACATACATACCGACCTGGCTGAATTATTGCCAGTGAAAACAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CCA 90 bp CAAACCACTGACTCTGGCTTAACACCACACTCTAACAGAAAAGAAGAAACCTTTCCGTGTTTTTGTTCCTaGAAGTCAAGTATCTTACAC +
Preference number: 4 (lower is better)
Translates to: QTTDSGLTPHSNRKEETFPCFCS*KSSILH
Trigger: GTGTAAGATACTTGACTTCCAGGAACAAAAACACGG...AAAGGTTTCTTCTTTTCTGTTAGAGTGTGGTGTTAAGCCAGAGTCAGTGGTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS-3UTR CCA 90 bp TCTTTTACAGAATGCAGATCACTGCTAACAATCCACATGACTAAGTCTTCAGTTCTCCATAACCTCCCTTaGACTGCATTTGGTTCTGAA +
Preference number: 4 (lower is better)
Translates to: SFTECRSLLTIHMTKSSVLHNLP*TAFGSE
Trigger: TTCAGAACCAAATGCAGTCCAAGGGAGGTTATGGAG...AACTGAAGACTTAGTCATGTGGATTGTTAGCAGTGATCTGCATTCTGTAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CCA 90 bp ACAAATGACCTCTTGAGATTTACAACCCCCTTTATAAAAGTGGGAAAGCTGCCTAGAAATGTTAATTTCTaGCATCCCATGGGCTCTTAC +
Preference number: 4 (lower is better)
Translates to: TNDLLRFTTPFIKVGKLPRNVNF*HPMGSY
Trigger: GTAAGAGCCCATGGGATGCCAGAAATTAACATTTCT...AGGCAGCTTTCCCACTTTTATAAAGGGGGTTGTAAATCTCAAGAGGTCATTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CCA 90 bp CAAACCACTGACTCTGGCTTAACACCACACTCTAACAGAAAAGAAGAAACCTTTAGAAATGTTAATTTCTaGCATCCCATGGGCTCTTAC +
Preference number: 4 (lower is better)
Translates to: QTTDSGLTPHSNRKEETFRNVNF*HPMGSY
Trigger: GTAAGAGCCCATGGGATGCCAGAAATTAACATTTCT...AAAGGTTTCTTCTTTTCTGTTAGAGTGTGGTGTTAAGCCAGAGTCAGTGGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS-3UTR CCA 90 bp ACTGATAATGCTGCACTGGAAATGCTAAACCCAATGTTAACTAAAGTCAACATTGAAGATGCTCAGGATTaGACTGGAGGAGAGTATGAC +
Preference number: 4 (lower is better)
Translates to: TDNAALEMLNPMLTKVNIEDAQD*TGGEYD
Trigger: GTCATACTCTCCTCCAGTCCAATCCTGAGCATCTTC...AATGTTGACTTTAGTTAACATTGGGTTTAGCATTTCCAGTGCAGCATTATCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CCA 90 bp ACACAAACCACTGACTCTGGCTTAACACCACACTCTAACAGAAAAGAAGAAACCTTCATGCCTACATCATaGGAAAGTACCTCTTTTACA +
Preference number: 4 (lower is better)
Translates to: TQTTDSGLTPHSNRKEETFMPTS*ESTSFT
Trigger: TGTAAAAGAGGTACTTTCCCATGATGTAGGCATGAA...GGTTTCTTCTTTTCTGTTAGAGTGTGGTGTTAAGCCAGAGTCAGTGGTTTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR TCA 90 bp CAAACCACTGACTCTGGCTTAACACCACACTCTAACAGAAAAGAAGAAACCTTTTACGATGATGTCCAGTaGTGCCAAGATGAAATTTTA +
Preference number: 4 (lower is better)
Translates to: QTTDSGLTPHSNRKEETFYDDVQ*CQDEIL
Trigger: TAAAATTTCATCTTGGCATCACTGGACATCATCGTA...AAAGGTTTCTTCTTTTCTGTTAGAGTGTGGTGTTAAGCCAGAGTCAGTGGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS-3UTR TCA 90 bp ACCACTGACTCTGGCTTAACACCACACTCTAACAGAAAAGAAGAAACCTTTACATACGATGATGTCCAGTaGTGCCAAGATGAAATTTTA +
Preference number: 4 (lower is better)
Translates to: TTDSGLTPHSNRKEETFTYDDVQ*CQDEIL
Trigger: TAAAATTTCATCTTGGCATCACTGGACATCATCGTA...TGTAAAGGTTTCTTCTTTTCTGTTAGAGTGTGGTGTTAAGCCAGAGTCAGTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS-3UTR TCA 90 bp ATGTTTGTTCAGTTGCCTGTTTTGCAAGAATCTTGGACTAAGGTAAATGAAGGCGTAAATGAGCACCAATaGAGGTTCCAAATCTCAACT +
Preference number: 4 (lower is better)
Translates to: MFVQLPVLQESWTKVNEGVNEHQ*RFQIST
Trigger: AGTTGAGATTTGGAACCTTCATTGGTGCTCATTTAC...GCCTTCATTTACCTTAGTCCAAGATTCTTGCAAAACAGGCAACTGAACAAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR GCA 90 bp ACAAATGACCTCTTGAGATTTACAACCCCCTTTATAAAAGTGGGAAAGCTGCCTGAACATTCCATATTATaGATACAGATGACCGCAGAT +
Preference number: 4 (lower is better)
Translates to: TNDLLRFTTPFIKVGKLPEHSIL*IQMTAD
Trigger: ATCTGCGGTCATCTGTATGCATAATATGGAATGTTC...AGGCAGCTTTCCCACTTTTATAAAGGGGGTTGTAAATCTCAAGAGGTCATTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360515.7
ENST00000505065.2
CDS-3UTR GCA 90 bp CAAACCACTGACTCTGGCTTAACACCACACTCTAACAGAAAAGAAGAAACCTTTGAACATTCCATATTATaGATACAGATGACCGCAGAT +
Preference number: 4 (lower is better)
Translates to: QTTDSGLTPHSNRKEETFEHSIL*IQMTAD
Trigger: ATCTGCGGTCATCTGTATGCATAATATGGAATGTTC...AAAGGTTTCTTCTTTTCTGTTAGAGTGTGGTGTTAAGCCAGAGTCAGTGGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000503291.5
ENST00000505065.2
CDS-3UTR GCA 90 bp GTTTTCTTATTTCTTGATTTTATTGGCACCTCCCAGGCACTTTGGCATGTGCTCGTCTTCAGTTTCCCTTaGTTAACATTTGTTAGCATA +
Preference number: 4 (lower is better)
Translates to: VFLFLDFIGTSQALWHVLVFSFP*LTFVSI
Trigger: TATGCTAACAAATGTTAAGCAAGGGAAACTGAAGAC...GAGCACATGCCAAAGTGCCTGGGAGGTGCCAATAAAATCAAGAAATAAGAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR GCA 90 bp ACCACTGACTCTGGCTTAACACCACACTCTAACAGAAAAGAAGAAACCTTTACAACCTCTTTTACAGAATaGAGATCACTGCTAACAATC +
Preference number: 4 (lower is better)
Translates to: TTDSGLTPHSNRKEETFTTSFTE*RSLLTI
Trigger: GATTGTTAGCAGTGATCTGCATTCTGTAAAAGAGGT...TGTAAAGGTTTCTTCTTTTCTGTTAGAGTGTGGTGTTAAGCCAGAGTCAGTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR GCA 90 bp CAAACCACTGACTCTGGCTTAACACCACACTCTAACAGAAAAGAAGAAACCTTTACCTCTTTTACAGAATaGAGATCACTGCTAACAATC +
Preference number: 4 (lower is better)
Translates to: QTTDSGLTPHSNRKEETFTSFTE*RSLLTI
Trigger: GATTGTTAGCAGTGATCTGCATTCTGTAAAAGAGGT...AAAGGTTTCTTCTTTTCTGTTAGAGTGTGGTGTTAAGCCAGAGTCAGTGGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CCA 90 bp CAAACCACTGACTCTGGCTTAACACCACACTCTAACAGAAAAGAAGAAACCTTTAGATTTCTTCTCATTTaGGTTCCAGGTTTCACTCAA +
Preference number: 4 (lower is better)
Translates to: QTTDSGLTPHSNRKEETFRFLLI*VPGFTQ
Trigger: TTGAGTGAAACCTGGAACCCAAATGAGAAGAAATCT...AAAGGTTTCTTCTTTTCTGTTAGAGTGTGGTGTTAAGCCAGAGTCAGTGGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000503291.5
ENST00000505065.2
CDS-3UTR CCA 90 bp ATGTTTGTTCAGTTGCCTGTTTTGCAAGAATCTTGGACTAAGGTAAATGAAGGCTATGCACAAAGTTTGTaGGCTCTCCAATCATACTTC +
Preference number: 4 (lower is better)
Translates to: MFVQLPVLQESWTKVNEGYAQSL*ALQSYF
Trigger: GAAGTATGATTGGAGAGCCCACAAACTTTGTGCATA...GCCTTCATTTACCTTAGTCCAAGATTCTTGCAAAACAGGCAACTGAACAAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CCA 90 bp CAAACCACTGACTCTGGCTTAACACCACACTCTAACAGAAAAGAAGAAACCTTTTCAAGAAACTGCTACTaGAAACAACTGGATACCATA +
Preference number: 4 (lower is better)
Translates to: QTTDSGLTPHSNRKEETFSRNCY*KQLDTI
Trigger: TATGGTATCCAGTTGTTTCCAGTAGCAGTTTCTTGA...AAAGGTTTCTTCTTTTCTGTTAGAGTGTGGTGTTAAGCCAGAGTCAGTGGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS-3UTR GCA 90 bp TACATCATGGGAAAGTACCTCTTTTACAGAATGCAGATCACTGCTAACAATCCAGAACATTCCATATTATaGATACAGATGACCGCAGAT +
Preference number: 4 (lower is better)
Translates to: YIMGKYLFYRMQITANNPEHSIL*IQMTAD
Trigger: ATCTGCGGTCATCTGTATGCATAATATGGAATGTTC...TGGATTGTTAGCAGTGATCTGCATTCTGTAAAAGAGGTACTTTCCCATGATGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360515.7
ENST00000505065.2
CDS-3UTR GCA 90 bp ATGTTTGTTCAGTTGCCTGTTTTGCAAGAATCTTGGACTAAGGTAAATGAAGGCAGAAGTTCAAGAAACTaGTACTGGAAACAACTGGAT +
Preference number: 4 (lower is better)
Translates to: MFVQLPVLQESWTKVNEGRSSRN*YWKQLD
Trigger: ATCCAGTTGTTTCCAGTAGCAGTTTCTTGAACTTCT...GCCTTCATTTACCTTAGTCCAAGATTCTTGCAAAACAGGCAACTGAACAAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR GCA 90 bp TACATCATGGGAAAGTACCTCTTTTACAGAATGCAGATCACTGCTAACAATCCAAGAAGTTCAAGAAACTaGTACTGGAAACAACTGGAT +
Preference number: 4 (lower is better)
Translates to: YIMGKYLFYRMQITANNPRSSRN*YWKQLD
Trigger: ATCCAGTTGTTTCCAGTAGCAGTTTCTTGAACTTCT...TGGATTGTTAGCAGTGATCTGCATTCTGTAAAAGAGGTACTTTCCCATGATGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR GCA 90 bp ACAAATGACCTCTTGAGATTTACAACCCCCTTTATAAAAGTGGGAAAGCTGCCTGTCTTCAGTTTCCCTTaGTTAACATTTGTTAGCATA +
Preference number: 4 (lower is better)
Translates to: TNDLLRFTTPFIKVGKLPVFSFP*LTFVSI
Trigger: TATGCTAACAAATGTTAAGCAAGGGAAACTGAAGAC...AGGCAGCTTTCCCACTTTTATAAAGGGGGTTGTAAATCTCAAGAGGTCATTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CCA 90 bp TACATCATGGGAAAGTACCTCTTTTACAGAATGCAGATCACTGCTAACAATCCATCAAGAAACTGCTACTaGAAACAACTGGATACCATA +
Preference number: 4 (lower is better)
Translates to: YIMGKYLFYRMQITANNPSRNCY*KQLDTI
Trigger: TATGGTATCCAGTTGTTTCCAGTAGCAGTTTCTTGA...TGGATTGTTAGCAGTGATCTGCATTCTGTAAAAGAGGTACTTTCCCATGATGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CCA 90 bp ACTGATAATGCTGCACTGGAAATGCTAAACCCAATGTTAACTAAAGTCAACATTAGATTTCTTCTCATTTaGGTTCCAGGTTTCACTCAA +
Preference number: 4 (lower is better)
Translates to: TDNAALEMLNPMLTKVNIRFLLI*VPGFTQ
Trigger: TTGAGTGAAACCTGGAACCCAAATGAGAAGAAATCT...AATGTTGACTTTAGTTAACATTGGGTTTAGCATTTCCAGTGCAGCATTATCAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360515.7
ENST00000505065.2
CDS CCA 90 bp GAGATCCGGGACTGCAGCACTCGCGGGAAAGGACGCTCCGAAAGATaGCGACCAAACCTGGGCGGGAGCGTGGGGGAGCCCCTTCCCACC +
Preference number: 5 (lower is better)
Translates to: EIRDCSTRGKGRSER*RPNLGGSVGEPLPT
Trigger: GGTGGGAAGGGGCTCCCCCACGCTCCCGCCCAGGTTTGGTCGCCATCTTTCGGAGCGTCCTTTCCCGCGAGTGCTGCAGTCCCGGATCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506419.5
CDS CCA 90 bp ACCAGGGCTATCCCGCCTTCGTATCCACGAGCTGCATCTGGACATTaGCAGGCATTCCACCTCCATAACCTCCCTTGGACTGCATTTGGT +
Preference number: 5 (lower is better)
Translates to: TRAIPPSYPRAASGH*QAFHLHNLPWTAFG
Trigger: ACCAAATGCAGTCCAAGGGAGGTTATGGAGGTGGAATGCCTGCCAATGTCCAGATGCAGCTCGTGGATACGAAGGCGGGATAGCCCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS-3UTR CAA 90 bp ACACAAACCACTGACTCTGGCTTAACACCACACTCTAACAGAAAAGAAGAAACCGCCCTATCGTCGCCTTaGTCTCAGCCGCCCGCTCCG +
Preference number: 5 (lower is better)
Translates to: TQTTDSGLTPHSNRKEETALSSP*SQPPAP
Trigger: CGGAGCGGGCGGCTGAGACAAAGGCGACGATAGGGC...GGTTTCTTCTTTTCTGTTAGAGTGTGGTGTTAAGCCAGAGTCAGTGGTTTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000503291.5
ENST00000505065.2
CDS-3UTR CAA 90 bp CAAACCACTGACTCTGGCTTAACACCACACTCTAACAGAAAAGAAGAAACCTTTGCCCTATCGTCGCCTTaGTCTCAGCCGCCCGCTCCG +
Preference number: 5 (lower is better)
Translates to: QTTDSGLTPHSNRKEETFALSSP*SQPPAP
Trigger: CGGAGCGGGCGGCTGAGACAAAGGCGACGATAGGGC...AAAGGTTTCTTCTTTTCTGTTAGAGTGTGGTGTTAAGCCAGAGTCAGTGGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000503291.5
ENST00000505065.2
CDS-3UTR CAA 90 bp TGGCTTACCATGGAGATCTGCTCCAACACATGCTGGTCGTTGGAGCAGCAAAAAAGCTGCATCTGGACATaGGCAGGCATTCCACCTCCA +
Preference number: 5 (lower is better)
Translates to: WLTMEICSNTCWSLEQQKSCIWT*AGIPPP
Trigger: TGGAGGTGGAATGCCTGCCAATGTCCAGATGCAGCT...TTTTTGCTGCTCCAACGACCAGCATGTGTTGGAGCAGATCTCCATGGTAAGCCA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CAA 90 bp GACTCTGGAGGTCTGCAGTTAGTAGTACAGGCCAGAAGTTCAAGAAACTGCTACAGGTGCCATCACACTTaGGAGAAAGGACCAGGGCTA +
Preference number: 5 (lower is better)
Translates to: DSGGLQLVVQARSSRNCYRCHHT*EKGPGL
Trigger: TAGCCCTGGTCCTTTCTCCAAAGTGTGATGGCACCT...GTAGCAGTTTCTTGAACTTCTGGCCTGTACTACTAACTGCAGACCTCCAGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
CDS-3UTR CAA 90 bp GCTGACAAGTCCACTTTTGGCTTACCATGGAGATCTGCTCCAACACATGCTGGTTCCCTTGGACTGCATTaGGTTCTGAATGGAGCTAAC +
Preference number: 5 (lower is better)
Translates to: ADKSTFGLPWRSAPTHAGSLGLH*VLNGAN
Trigger: GTTAGCTCCATTCAGAACCAAATGCAGTCCAAGGGA...ACCAGCATGTGTTGGAGCAGATCTCCATGGTAAGCCAAAAGTGGACTTGTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CAA 90 bp TTGCTCTTGGCAACTGATGTGGCCCCTAAAATAATATGTAGAGCACAGAAAGGCAGCTGCATCTGGACATaGGCAGGCATTCCACCTCCA +
Preference number: 5 (lower is better)
Translates to: LLLATDVAPKIICRAQKGSCIWT*AGIPPP
Trigger: TGGAGGTGGAATGCCTGCCAATGTCCAGATGCAGCT...GCCTTTCTGTGCTCTACATATTATTTTAGGGGCCACATCAGTTGCCAAGAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS-3UTR CAA 90 bp TGGCTTACCATGGAGATCTGCTCCAACACATGCTGGTCGTTGGAGCAGCAAAAACGGCTTCCCGTACTATaGTTCCAGGAGTTATATGAC +
Preference number: 5 (lower is better)
Translates to: WLTMEICSNTCWSLEQQKRLPVL*FQELYD
Trigger: GTCATATAACTCCTGGAACAATAGTACGGGAAGCCG...TTTTTGCTGCTCCAACGACCAGCATGTGTTGGAGCAGATCTCCATGGTAAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CAA 90 bp ACACAAACCACTGACTCTGGCTTAACACCACACTCTAACAGAAAAGAAGAAACCAGCTGCATCTGGACATaGGCAGGCATTCCACCTCCA +
Preference number: 5 (lower is better)
Translates to: TQTTDSGLTPHSNRKEETSCIWT*AGIPPP
Trigger: TGGAGGTGGAATGCCTGCCAATGTCCAGATGCAGCT...GGTTTCTTCTTTTCTGTTAGAGTGTGGTGTTAAGCCAGAGTCAGTGGTTTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS-3UTR CAA 90 bp GACTCTGGAGGTCTGCAGTTAGTAGTACAGGCCAGAAGTTCAAGAAACTGCTACCGGCTTCCCGTACTATaGTTCCAGGAGTTATATGAC +
Preference number: 5 (lower is better)
Translates to: DSGGLQLVVQARSSRNCYRLPVL*FQELYD
Trigger: GTCATATAACTCCTGGAACAATAGTACGGGAAGCCG...GTAGCAGTTTCTTGAACTTCTGGCCTGTACTACTAACTGCAGACCTCCAGAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CAA 90 bp GACTCTGGAGGTCTGCAGTTAGTAGTACAGGCCAGAAGTTCAAGAAACTGCTACCTGACAAGTCCACTTTaGGCTTACCATGGAGATCTG +
Preference number: 5 (lower is better)
Translates to: DSGGLQLVVQARSSRNCYLTSPL*AYHGDL
Trigger: CAGATCTCCATGGTAAGCCAAAAGTGGACTTGTCAG...GTAGCAGTTTCTTGAACTTCTGGCCTGTACTACTAACTGCAGACCTCCAGAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CAA 90 bp GTTGTTTTCACTGGCAATAATTCAGCCAGGTCGGTATGTATGTTGCTCTTGGCATGGGGTTTCACCATGTaGGCCAGGCTAGTCTCCAAT +
Preference number: 5 (lower is better)
Translates to: VVFTGNNSARSVCMLLLAWGFTM*ARLVSN
Trigger: ATTGGAGACTAGCCTGGCCAACATGGTGAAACCCCA...TGCCAAGAGCAACATACATACCGACCTGGCTGAATTATTGCCAGTGAAAACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505065.2
CDS-3UTR CAA 90 bp TTGCTCTTGGCAACTGATGTGGCCCCTAAAATAATATGTAGAGCACAGAAAGGCAGATCCTCTCTGTGCTaGGGATTGACACAAAGGCTC +
Preference number: 5 (lower is better)
Translates to: LLLATDVAPKIICRAQKGRSSLC*GLTQRL
Trigger: GAGCCTTTGTGTCAATCCCAAGCACAGAGAGGATCT...GCCTTTCTGTGCTCTACATATTATTTTAGGGGCCACATCAGTTGCCAAGAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CAA 90 bp GCTGACAAGTCCACTTTTGGCTTACCATGGAGATCTGCTCCAACACATGCTGGTGGAACAAATGACCTCTaGAGATTTACAACCCCCTTT +
Preference number: 5 (lower is better)
Translates to: ADKSTFGLPWRSAPTHAGGTNDL*RFTTPF
Trigger: AAAGGGGGTTGTAAATCTCAAGAGGTCATTTGTTCC...ACCAGCATGTGTTGGAGCAGATCTCCATGGTAAGCCAAAAGTGGACTTGTCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CAA 90 bp CATAACCACACCTGTAACCACACCTGTTTACAACCACAGGTCCTTGCTCTCAAACTGTATGCACAAAGTTaGTGGGCTCTCCAATCATAC +
Preference number: 5 (lower is better)
Translates to: HNHTCNHTCLQPQVLALKLYAQS*WALQSY
Trigger: GTATGATTGGAGAGCCCACAAACTTTGTGCATACAG...TTTGAGAGCAAGGACCTGTGGTTGTAAACAGGTGTGGTTACAGGTGTGGTTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS-3UTR CAA 90 bp GTTGTTTTCACTGGCAATAATTCAGCCAGGTCGGTATGTATGTTGCTCTTGGCATCCCTTGGACTGCATTaGGTTCTGAATGGAGCTAAC +
Preference number: 5 (lower is better)
Translates to: VVFTGNNSARSVCMLLLASLGLH*VLNGAN
Trigger: GTTAGCTCCATTCAGAACCAAATGCAGTCCAAGGGA...TGCCAAGAGCAACATACATACCGACCTGGCTGAATTATTGCCAGTGAAAACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS-3UTR CAA 90 bp GCCTACATCATGGGAAAGTACCTCTTTTACAGAATGCAGATCACTGCTAACAATAGGTGCCATCACACTTaGGAGAAAGGACCAGGGCTA +
Preference number: 5 (lower is better)
Translates to: AYIMGKYLFYRMQITANNRCHHT*EKGPGL
Trigger: TAGCCCTGGTCCTTTCTCCAAAGTGTGATGGCACCT...ATTGTTAGCAGTGATCTGCATTCTGTAAAAGAGGTACTTTCCCATGATGTAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360515.7
ENST00000395246.5
CDS-3UTR CAA 90 bp CAAACCACTGACTCTGGCTTAACACCACACTCTAACAGAAAAGAAGAAACCTTTAGGTGCCATCACACTTaGGAGAAAGGACCAGGGCTA +
Preference number: 5 (lower is better)
Translates to: QTTDSGLTPHSNRKEETFRCHHT*EKGPGL
Trigger: TAGCCCTGGTCCTTTCTCCAAAGTGTGATGGCACCT...AAAGGTTTCTTCTTTTCTGTTAGAGTGTGGTGTTAAGCCAGAGTCAGTGGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
CDS-3UTR CAA 90 bp CTGAGCAGAATGACAACAGTACTCAGGCAAATTCCACAATGCAACATCCACTTGAGGTCGGTATGTATGTaGCTCTTGGCAACTGATGTG +
Preference number: 5 (lower is better)
Translates to: LSRMTTVLRQIPQCNIHLRSVCM*LLATDV
Trigger: CACATCAGTTGCCAAGAGCAACATACATACCGACCT...CAAGTGGATGTTGCATTGTGGAATTTGCCTGAGTACTGTTGTCATTCTGCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CAA 90 bp ACACAAACCACTGACTCTGGCTTAACACCACACTCTAACAGAAAAGAAGAAACCAGATCCTCTCTGTGCTaGGGATTGACACAAAGGCTC +
Preference number: 5 (lower is better)
Translates to: TQTTDSGLTPHSNRKEETRSSLC*GLTQRL
Trigger: GAGCCTTTGTGTCAATCCCAAGCACAGAGAGGATCT...GGTTTCTTCTTTTCTGTTAGAGTGTGGTGTTAAGCCAGAGTCAGTGGTTTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CAA 90 bp CATAACCACACCTGTAACCACACCTGTTTACAACCACAGGTCCTTGCTCTCAAATGCAAATGTTTTTCCTaGGCAGATCCTCTCTGTGCT +
Preference number: 5 (lower is better)
Translates to: HNHTCNHTCLQPQVLALKCKCFS*ADPLCA
Trigger: AGCACAGAGAGGATCTGCCAAGGAAAAACATTTGCA...TTTGAGAGCAAGGACCTGTGGTTGTAAACAGGTGTGGTTACAGGTGTGGTTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CAA 90 bp TACATATATTTACTATTATTGGCCTGGCCATGTCTGGCCGTCAGGTCCAGACCCATATATTTACTATTATaGGCCTGGCCATGTCTGGCC +
Preference number: 5 (lower is better)
Translates to: YIYLLLLAWPCLAVRSRPIYLLL*AWPCLA
Trigger: GGCCAGACATGGCCAGGCCAATAATAGTAAATATAT...GGGTCTGGACCTGACGGCCAGACATGGCCAGGCCAATAATAGTAAATATATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505065.2
CDS TCA 90 bp GAGCTAACTGAATTCATTCCACTGAACAGGTCTCCTGATCCAACATaGGCTGTATGCACAAAGTTTGTGGGCTCTCCAATCATACTTCTG +
Preference number: 5 (lower is better)
Translates to: ELTEFIPLNRSPDPT*AVCTKFVGSPIILL
Trigger: CAGAAGTATGATTGGAGAGCCCACAAACTTTGTGCATACAGCTCATGTTGGATCAGGAGACCTGTTCAGTGGAATGAATTCAGTTAGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS-3UTR CAA 90 bp CATAACCACACCTGTAACCACACCTGTTTACAACCACAGGTCCTTGCTCTCAAACAGATTTCTTCTCATTaGGGTTCCAGGTTTCACTCA +
Preference number: 5 (lower is better)
Translates to: HNHTCNHTCLQPQVLALKQISSH*GSRFHS
Trigger: TGAGTGAAACCTGGAACCCAAATGAGAAGAAATCTG...TTTGAGAGCAAGGACCTGTGGTTGTAAACAGGTGTGGTTACAGGTGTGGTTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000503291.5
ENST00000505065.2
CDS-3UTR CAA 90 bp GTTGTTTTCACTGGCAATAATTCAGCCAGGTCGGTATGTATGTTGCTCTTGGCACTGTATGCACAAAGTTaGTGGGCTCTCCAATCATAC +
Preference number: 5 (lower is better)
Translates to: VVFTGNNSARSVCMLLLALYAQS*WALQSY
Trigger: GTATGATTGGAGAGCCCACAAACTTTGTGCATACAG...TGCCAAGAGCAACATACATACCGACCTGGCTGAATTATTGCCAGTGAAAACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS-3UTR CAA 90 bp TTGCTCTTGGCAACTGATGTGGCCCCTAAAATAATATGTAGAGCACAGAAAGGCTCTCTGTGCTTGGGATaGACACAAAGGCTCAAAACT +
Preference number: 5 (lower is better)
Translates to: LLLATDVAPKIICRAQKGSLCLG*TQRLKT
Trigger: AGTTTTGAGCCTTTGTGTCAATCCCAAGCACAGAGA...GCCTTTCTGTGCTCTACATATTATTTTAGGGGCCACATCAGTTGCCAAGAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CAA 90 bp TTGCTCTTGGCAACTGATGTGGCCCCTAAAATAATATGTAGAGCACAGAAAGGCCAGATTTCTTCTCATTaGGGTTCCAGGTTTCACTCA +
Preference number: 5 (lower is better)
Translates to: LLLATDVAPKIICRAQKGQISSH*GSRFHS
Trigger: TGAGTGAAACCTGGAACCCAAATGAGAAGAAATCTG...GCCTTTCTGTGCTCTACATATTATTTTAGGGGCCACATCAGTTGCCAAGAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000503291.5
ENST00000505065.2
CDS-3UTR CAA 90 bp GCCTACATCATGGGAAAGTACCTCTTTTACAGAATGCAGATCACTGCTAACAATTCCCTTGGACTGCATTaGGTTCTGAATGGAGCTAAC +
Preference number: 5 (lower is better)
Translates to: AYIMGKYLFYRMQITANNSLGLH*VLNGAN
Trigger: GTTAGCTCCATTCAGAACCAAATGCAGTCCAAGGGA...ATTGTTAGCAGTGATCTGCATTCTGTAAAAGAGGTACTTTCCCATGATGTAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CAA 90 bp ACAAATGACCTCTTGAGATTTACAACCCCCTTTATAAAAGTGGGAAAGCTGCCTAGGTCGGTATGTATGTaGCTCTTGGCAACTGATGTG +
Preference number: 5 (lower is better)
Translates to: TNDLLRFTTPFIKVGKLPRSVCM*LLATDV
Trigger: CACATCAGTTGCCAAGAGCAACATACATACCGACCT...AGGCAGCTTTCCCACTTTTATAAAGGGGGTTGTAAATCTCAAGAGGTCATTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CAA 90 bp ACACAAACCACTGACTCTGGCTTAACACCACACTCTAACAGAAAAGAAGAAACCTGCAAATGTTTTTCCTaGGCAGATCCTCTCTGTGCT +
Preference number: 5 (lower is better)
Translates to: TQTTDSGLTPHSNRKEETCKCFS*ADPLCA
Trigger: AGCACAGAGAGGATCTGCCAAGGAAAAACATTTGCA...GGTTTCTTCTTTTCTGTTAGAGTGTGGTGTTAAGCCAGAGTCAGTGGTTTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CAA 90 bp CAAACCACTGACTCTGGCTTAACACCACACTCTAACAGAAAAGAAGAAACCTTTCTGACAAGTCCACTTTaGGCTTACCATGGAGATCTG +
Preference number: 5 (lower is better)
Translates to: QTTDSGLTPHSNRKEETFLTSPL*AYHGDL
Trigger: CAGATCTCCATGGTAAGCCAAAAGTGGACTTGTCAG...AAAGGTTTCTTCTTTTCTGTTAGAGTGTGGTGTTAAGCCAGAGTCAGTGGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CAA 90 bp ACAAATGACCTCTTGAGATTTACAACCCCCTTTATAAAAGTGGGAAAGCTGCCTCTGTATGCACAAAGTTaGTGGGCTCTCCAATCATAC +
Preference number: 5 (lower is better)
Translates to: TNDLLRFTTPFIKVGKLPLYAQS*WALQSY
Trigger: GTATGATTGGAGAGCCCACAAACTTTGTGCATACAG...AGGCAGCTTTCCCACTTTTATAAAGGGGGTTGTAAATCTCAAGAGGTCATTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CAA 90 bp ACAAATGACCTCTTGAGATTTACAACCCCCTTTATAAAAGTGGGAAAGCTGCCTTCTCTGTGCTTGGGATaGACACAAAGGCTCAAAACT +
Preference number: 5 (lower is better)
Translates to: TNDLLRFTTPFIKVGKLPSLCLG*TQRLKT
Trigger: AGTTTTGAGCCTTTGTGTCAATCCCAAGCACAGAGA...AGGCAGCTTTCCCACTTTTATAAAGGGGGTTGTAAATCTCAAGAGGTCATTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CAA 90 bp CAAACCACTGACTCTGGCTTAACACCACACTCTAACAGAAAAGAAGAAACCTTTTGCAAATGTTTTTCCTaGGCAGATCCTCTCTGTGCT +
Preference number: 5 (lower is better)
Translates to: QTTDSGLTPHSNRKEETFCKCFS*ADPLCA
Trigger: AGCACAGAGAGGATCTGCCAAGGAAAAACATTTGCA...AAAGGTTTCTTCTTTTCTGTTAGAGTGTGGTGTTAAGCCAGAGTCAGTGGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CAA 90 bp TACATCATGGGAAAGTACCTCTTTTACAGAATGCAGATCACTGCTAACAATCCACGGCTTCCCGTACTATaGTTCCAGGAGTTATATGAC +
Preference number: 5 (lower is better)
Translates to: YIMGKYLFYRMQITANNPRLPVL*FQELYD
Trigger: GTCATATAACTCCTGGAACAATAGTACGGGAAGCCG...TGGATTGTTAGCAGTGATCTGCATTCTGTAAAAGAGGTACTTTCCCATGATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CAA 90 bp ACAAATGACCTCTTGAGATTTACAACCCCCTTTATAAAAGTGGGAAAGCTGCCTCACATAAGAAGCATCTaGTCATCAGAATCCTCCCCA +
Preference number: 5 (lower is better)
Translates to: TNDLLRFTTPFIKVGKLPHIRSI*SSESSP
Trigger: TGGGGAGGATTCTGATGACAAGATGCTTCTTATGTG...AGGCAGCTTTCCCACTTTTATAAAGGGGGTTGTAAATCTCAAGAGGTCATTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000505065.2
CDS-3UTR CAA 90 bp CTGAGCAGAATGACAACAGTACTCAGGCAAATTCCACAATGCAACATCCACTTGGTCAGTAGTTATTCCTaGCAGATTTCTTCTCATTTG +
Preference number: 5 (lower is better)
Translates to: LSRMTTVLRQIPQCNIHLVSSYS*QISSHL
Trigger: CAAATGAGAAGAAATCTGCAAGGAATAACTACTGAC...CAAGTGGATGTTGCATTGTGGAATTTGCCTGAGTACTGTTGTCATTCTGCTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360515.7
ENST00000505065.2
CDS-3UTR CAA 90 bp TACATCATGGGAAAGTACCTCTTTTACAGAATGCAGATCACTGCTAACAATCCACTGTATGCACAAAGTTaGTGGGCTCTCCAATCATAC +
Preference number: 5 (lower is better)
Translates to: YIMGKYLFYRMQITANNPLYAQS*WALQSY
Trigger: GTATGATTGGAGAGCCCACAAACTTTGTGCATACAG...TGGATTGTTAGCAGTGATCTGCATTCTGTAAAAGAGGTACTTTCCCATGATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CAA 90 bp ACACAAACCACTGACTCTGGCTTAACACCACACTCTAACAGAAAAGAAGAAACCAAGGCTTCGTACAGGTaGTTTTCACTGGCAATAATT +
Preference number: 5 (lower is better)
Translates to: TQTTDSGLTPHSNRKEETKASYR*FSLAII
Trigger: AATTATTGCCAGTGAAAACAACCTGTACGAAGCCTT...GGTTTCTTCTTTTCTGTTAGAGTGTGGTGTTAAGCCAGAGTCAGTGGTTTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS-3UTR CAA 90 bp ACTGATAATGCTGCACTGGAAATGCTAAACCCAATGTTAACTAAAGTCAACATTAGATCCTCTCTGTGCTaGGGATTGACACAAAGGCTC +
Preference number: 5 (lower is better)
Translates to: TDNAALEMLNPMLTKVNIRSSLC*GLTQRL
Trigger: GAGCCTTTGTGTCAATCCCAAGCACAGAGAGGATCT...AATGTTGACTTTAGTTAACATTGGGTTTAGCATTTCCAGTGCAGCATTATCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CAA 90 bp ACAAATGACCTCTTGAGATTTACAACCCCCTTTATAAAAGTGGGAAAGCTGCCTGGAACAAATGACCTCTaGAGATTTACAACCCCCTTT +
Preference number: 5 (lower is better)
Translates to: TNDLLRFTTPFIKVGKLPGTNDL*RFTTPF
Trigger: AAAGGGGGTTGTAAATCTCAAGAGGTCATTTGTTCC...AGGCAGCTTTCCCACTTTTATAAAGGGGGTTGTAAATCTCAAGAGGTCATTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CAA 90 bp ACAAATGACCTCTTGAGATTTACAACCCCCTTTATAAAAGTGGGAAAGCTGCCTAAGGCTTCGTACAGGTaGTTTTCACTGGCAATAATT +
Preference number: 5 (lower is better)
Translates to: TNDLLRFTTPFIKVGKLPKASYR*FSLAII
Trigger: AATTATTGCCAGTGAAAACAACCTGTACGAAGCCTT...AGGCAGCTTTCCCACTTTTATAAAGGGGGTTGTAAATCTCAAGAGGTCATTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CAA 90 bp GTAATCATCTTTATTCTGCCATCTTACTTCATTGAGAGTATGGCTGTAGACAGACAGAACAAAACGTCCTaGAGGGTGAATTCATTCCAC +
Preference number: 5 (lower is better)
Translates to: VIIFILPSYFIESMAVDRQNKTS*RVNSFH
Trigger: GTGGAATGAATTCACCCTCAAGGACGTTTTGTTCTG...TCTGTCTACAGCCATACTCTCAATGAAGTAAGATGGCAGAATAAAGATGATTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502582.1
CDS-3UTR CAA 90 bp ACTGATAATGCTGCACTGGAAATGCTAAACCCAATGTTAACTAAAGTCAACATTTCTCTGTGCTTGGGATaGACACAAAGGCTCAAAACT +
Preference number: 5 (lower is better)
Translates to: TDNAALEMLNPMLTKVNISLCLG*TQRLKT
Trigger: AGTTTTGAGCCTTTGTGTCAATCCCAAGCACAGAGA...AATGTTGACTTTAGTTAACATTGGGTTTAGCATTTCCAGTGCAGCATTATCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CAA 90 bp ACTGATAATGCTGCACTGGAAATGCTAAACCCAATGTTAACTAAAGTCAACATTGGAACAAATGACCTCTaGAGATTTACAACCCCCTTT +
Preference number: 5 (lower is better)
Translates to: TDNAALEMLNPMLTKVNIGTNDL*RFTTPF
Trigger: AAAGGGGGTTGTAAATCTCAAGAGGTCATTTGTTCC...AATGTTGACTTTAGTTAACATTGGGTTTAGCATTTCCAGTGCAGCATTATCAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS-3UTR CAA 90 bp GCTAGTGTAATCATCTTTATTCTGCCATCTTACTTCATTGAGAGTATGGCTGTAACCACAGTATTGCTGTaGAGAAATCTGGTAATCTTC +
Preference number: 5 (lower is better)
Translates to: ASVIIFILPSYFIESMAVTTVLL*RNLVIF
Trigger: GAAGATTACCAGATTTCTCAACAGCAATACTGTGGT...TACAGCCATACTCTCAATGAAGTAAGATGGCAGAATAAAGATGATTACACTAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502582.1
CDS CCA 72 bp AAATTCACACACTCAAATCTGGCCCTATCTCCGGCATaGGCGAATCGGCCGGCAGGCGATGGGACCCCCGGG +
Preference number: 6 (lower is better)
Translates to: KFTHSNLALSPA*ANRPAGDGTPG
Trigger: CCCGGGGGTCCCATCGCCTGCCGGCCGATTCGCCCATGCCGGAGATAGGGCCAGATTTGAGTGTGTGAATTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506419.5
CDS CCA 72 bp ATCCCGCCTTCGTATCCACGAGCTGCATCTGGACATTaGCAGGCATTCCACCTCCATAACCTCCCTTGGACT +
Preference number: 6 (lower is better)
Translates to: IPPSYPRAASGH*QAFHLHNLPWT
Trigger: AGTCCAAGGGAGGTTATGGAGGTGGAATGCCTGCCAATGTCCAGATGCAGCTCGTGGATACGAAGGCGGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS TCA 72 bp AATCTGGCCCTATCATGCGATGAGTGTTTCATTCTCTaGCAGAGGTCCTGCAGCCACATGCAGACTCTGCCC +
Preference number: 6 (lower is better)
Translates to: NLALSCDECFIL*QRSCSHMQTLP
Trigger: GGGCAGAGTCTGCATGTGGCTGCAGGACCTCTGTCAGAGAATGAAACACTCATCGCATGATAGGGCCAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511432.5
CDS TCA 72 bp CTCTTTGTCAATTCATGCGATGAGTGTTTCATTCTCTaGCAGAGGTCCTGCAGCCACATGCAGACTCTGCCC +
Preference number: 6 (lower is better)
Translates to: LFVNSCDECFIL*QRSCSHMQTLP
Trigger: GGGCAGAGTCTGCATGTGGCTGCAGGACCTCTGTCAGAGAATGAAACACTCATCGCATGAATTGACAAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515533.1
CDS GCA 72 bp GTCAATCCGCCGTCGCCTTTTAGGCTGAGGCTGTTCTaGAATACAGCAGTTGAAACACAACCAGAATTCACT +
Preference number: 6 (lower is better)
Translates to: VNPPSPFRLRLF*NTAVETQPEFT
Trigger: AGTGAATTCTGGTTGTGTTTCAACTGCTGTATTGCAGAACAGCCTCAGCCTAAAAGGCGACGGCGGATTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000505065.2
CDS CAA 72 bp GGTCTCCTGATCCAACATGAGCTGTATGCACAAAGTTaGTGGGCTCTCCAATCATACTTCTGTCAATCCGCC +
Preference number: 6 (lower is better)
Translates to: GLLIQHELYAQS*WALQSYFCQSA
Trigger: GGCGGATTGACAGAAGTATGATTGGAGAGCCCACAAACTTTGTGCATACAGCTCATGTTGGATCAGGAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS TCA 72 bp GAATTCATTCCACTGAACAGGTCTCCTGATCCAACATaGGCTGTATGCACAAAGTTTGTGGGCTCTCCAATC +
Preference number: 6 (lower is better)
Translates to: EFIPLNRSPDPT*AVCTKFVGSPI
Trigger: GATTGGAGAGCCCACAAACTTTGTGCATACAGCTCATGTTGGATCAGGAGACCTGTTCAGTGGAATGAATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS TCA 72 bp CACTCATGCTTACAGTCCACAGTAAATGAGCACCAATaGAGGTTCCAAATCTCAACTCGGGAAGTTCCAAAA +
Preference number: 6 (lower is better)
Translates to: HSCLQSTVNEHQ*RFQISTREVPK
Trigger: TTTTGGAACTTCCCGAGTTGAGATTTGGAACCTTCATTGGTGCTCATTTACTGTGGACTGTAAGCATGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360515.7
ENST00000395246.5
ENST00000503291.5
ENST00000505065.2
CDS CAA 72 bp ACAGATGACCGCAGATTCACTGTCAGTAGTTATTCCTaGCAGATTTCTTCTCATTTGGGTTCCAGGTTTCAC +
Preference number: 6 (lower is better)
Translates to: TDDRRFTVSSYS*QISSHLGSRFH
Trigger: GTGAAACCTGGAACCCAAATGAGAAGAAATCTGCAAGGAATAACTACTGACAGTGAATCTGCGGTCATCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360515.7
ENST00000502840.5
ENST00000503291.5
ENST00000504701.5
ENST00000505065.2
ENST00000506419.5
ENST00000511432.5
CDS CAA 90 bp CGCAGATTCACTGTCAGTAGTTATTCCTTGCAGATTTCTTCTCATTaGGGTTCCAGGTTTCACTCAAAAATTCACACACTCAAATCTGGC +
Preference number: 6 (lower is better)
Translates to: RRFTVSSYSLQISSH*GSRFHSKIHTLKSG
Trigger: GCCAGATTTGAGTGTGTGAATTTTTGAGTGAAACCTGGAACCCAAATGAGAAGAAATCTGCAAGGAATAACTACTGACAGTGAATCTGCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360515.7
ENST00000502840.5
ENST00000503291.5
ENST00000504701.5
ENST00000505065.2
ENST00000506419.5
ENST00000511432.5
CDS TCA 72 bp CTCCTTTACTCTTTGTCAATTCTGTTTAAGTCCCAGTaGACCATGGTAAGCCACCAAACACTGTTAACTTCT +
Preference number: 6 (lower is better)
Translates to: LLYSLSILFKSQ*TMVSHQTLLTS
Trigger: AGAAGTTAACAGTGTTTGGTGGCTTACCATGGTTCACTGGGACTTAAACAGAATTGACAAAGAGTAAAGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502840.5
CDS CAA 90 bp ATTATGCATACAGATGACCGCAGATTCACTGTCAGTAGTTATTCCTaGCAGATTTCTTCTCATTTGGGTTCCAGGTTTCACTCAAAAATT +
Preference number: 6 (lower is better)
Translates to: IMHTDDRRFTVSSYS*QISSHLGSRFHSKI
Trigger: AATTTTTGAGTGAAACCTGGAACCCAAATGAGAAGAAATCTGCAAGGAATAACTACTGACAGTGAATCTGCGGTCATCTGTATGCATAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360515.7
ENST00000502840.5
ENST00000503291.5
ENST00000504701.5
ENST00000505065.2
ENST00000506419.5
ENST00000511432.5
CDS CAA 72 bp TCTGCTATAGCAAAAACAGGTAATTTGCTGCAAACTTaGAAGAAACAGCCTAAAATCTATCACTCCTCAGCA +
Preference number: 6 (lower is better)
Translates to: SAIAKTGNLLQT*KKQPKIYHSSA
Trigger: TGCTGAGGAGTGATAGATTTTAGGCTGTTTCTTCAAAGTTTGCAGCAAATTACCTGTTTTTGCTATAGCAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504701.5
CDS TCA 72 bp AAATCAGCTTTCTTCAATACCAAGATCACCATTCTTTaGGAACTTCCTTATAAGGTCCCAGATCAAACACTT +
Preference number: 6 (lower is better)
Translates to: KSAFFNTKITIL*ELPYKVPDQTL
Trigger: AAGTGTTTGATCTGGGACCTTATAAGGAAGTTCTCAAAGAATGGTGATCTTGGTATTGAAGAAAGCTGATTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502639.1