Pregenerated sensors for CDC40 (Homo sapiens)
Ensembl gene IDs: ENSG00000168438Ensembl transcript IDs: ENST00000307731.2, ENST00000368930.5, ENST00000368932.5, ENST00000453107.5, ENST00000606893.5
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 72 bp | CTGCAACCTCCACTCCTGGGTTCAAGCAATTCTCCCTaGCTCAGCCTTCTGAGTAGCTGGAATTACAGGCGC | + |
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Preference number: 3 (lower is better) Translates to: LQPPLLGSSNSP*LSLLSSWNYRR Trigger: GCGCCTGTAATTCCAGCTACTCAGAAGGCTGAGGCAGGGAGAATTGCTTGAACCCAGGAGTGGAGGTTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000307731.2 ENST00000368932.5 |
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| 3UTR TCA 72 bp | CCAAATATGTCAAGGAGATCAAAGGGGAGCTGCTCTTaGGTTGAGGTCTGGACCTTCACCCACTTGCCATCC | + |
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Preference number: 3 (lower is better) Translates to: PNMSRRSKGSCS*VEVWTFTHLPS Trigger: GGATGGCAAGTGGGTGAAGGTCCAGACCTCAACTCAAGAGCAGCTCCCCTTTGATCTCCTTGACATATTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| 3UTR TCA 72 bp | TTAAGCAGGAGAGCTCTTTTCCCAAATGCAAATTTGTaGGGGATTCCAAATATGTCAAGGAGATCAAAGGGG | + |
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Preference number: 3 (lower is better) Translates to: LSRRALFPNANL*GIPNMSRRSKG Trigger: CCCCTTTGATCTCCTTGACATATTTGGAATCCCTCACAAATTTGCATTTGGGAAAAGAGCTCTCCTGCTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS-3UTR CCA 90 bp | TGCAAATTTGTGAGGGATTCCAAATATGTCAAGGAGATCAAAGGGGAGCTGCTCGAGGGAGTCGGCGGCTaGCAGCGGACACCGACTGCT | + |
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Preference number: 4 (lower is better) Translates to: CKFVRDSKYVKEIKGELLEGVGG*QRTPTA Trigger: AGCAGTCGGTGTCCGCTGCCAGCCGCCGACTCCCTC...GAGCAGCTCCCCTTTGATCTCCTTGACATATTTGGAATCCCTCACAAATTTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS-3UTR TCA 90 bp | TGTCAAGGAGATCAAAGGGGAGCTGCTCTTGAGTTGAGGTCTGGACCTTCACCCACGGCAGGGTCAAGGTaGACTCCAGTCTCCAAATCT | + |
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Preference number: 4 (lower is better) Translates to: CQGDQRGAALELRSGPSPTAGSR*TPVSKS Trigger: AGATTTGGAGACTGGAGTTCACCTTGACCCTGCCGT...GGGTGAAGGTCCAGACCTCAACTCAAGAGCAGCTCCCCTTTGATCTCCTTGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS-3UTR GCA 90 bp | TGTCAAGGAGATCAAAGGGGAGCTGCTCTTGAGTTGAGGTCTGGACCTTCACCCAGGAAACAATCTGACTaGACTGACGCCCTTTGTGTG | + |
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Preference number: 4 (lower is better) Translates to: CQGDQRGAALELRSGPSPRKQSD*TDALCV Trigger: CACACAAAGGGCGTCAGTGCAGTCAGATTGTTTCCT...GGGTGAAGGTCCAGACCTCAACTCAAGAGCAGCTCCCCTTTGATCTCCTTGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS-3UTR CCA 90 bp | AAGCAGGAGAGCTCTTTTCCCAAATGCAAATTTGTGAGGGATTCCAAATATGTCCCTCCTCACCCCTCCTaGGGACCTGCAGTCACCTCC | + |
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Preference number: 4 (lower is better) Translates to: KQESSFPKCKFVRDSKYVPPHPS*GPAVTS Trigger: GGAGGTGACTGCAGGTCCCCAGGAGGGGTGAGGAGG...GACATATTTGGAATCCCTCACAAATTTGCATTTGGGAAAAGAGCTCTCCTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS-3UTR TCA 90 bp | CAAATATGTCAAGGAGATCAAAGGGGAGCTGCTCTTGAGTTGAGGTCTGGACCTTGTCATAGGCTGCACTaGGGAACTGTGTTCCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: QICQGDQRGAALELRSGPCHRLH*GTVFLQ Trigger: CTGCAGGAACACAGTTCCTCAGTGCAGCCTATGACA...AGGTCCAGACCTCAACTCAAGAGCAGCTCCCCTTTGATCTCCTTGACATATTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS-3UTR GCA 90 bp | GAGAGCTCTTTTCCCAAATGCAAATTTGTGAGGGATTCCAAATATGTCAAGGAGGGAAGCGGCCAGAGCTaGAATCGCAGCCGACATGAC | + |
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Preference number: 4 (lower is better) Translates to: ESSFPKCKFVRDSKYVKEGSGQS*NRSRHD Trigger: GTCATGTCGGCTGCGATTGCAGCTCTGGCCGCTTCC...CTCCTTGACATATTTGGAATCCCTCACAAATTTGCATTTGGGAAAAGAGCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS-3UTR TCA 90 bp | GAGAGCTCTTTTCCCAAATGCAAATTTGTGAGGGATTCCAAATATGTCAAGGAGGTCCGATTCGGACCCTaGACCCGAACCATAGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: ESSFPKCKFVRDSKYVKEVRFGP*TRTIGS Trigger: GCTTCCTATGGTTCGGGTTCAGGGTCCGAATCGGAC...CTCCTTGACATATTTGGAATCCCTCACAAATTTGCATTTGGGAAAAGAGCTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS-3UTR TCA 90 bp | TGCAAATTTGTGAGGGATTCCAAATATGTCAAGGAGATCAAAGGGGAGCTGCTCCAATCGCAGCCGACATaGCGGCAACAAATCTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: CKFVRDSKYVKEIKGELLQSQPT*RQQIFC Trigger: GCAGAAGATTTGTTGCCGTCATGTCGGCTGCGATTG...GAGCAGCTCCCCTTTGATCTCCTTGACATATTTGGAATCCCTCACAAATTTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS-3UTR GCA 90 bp | TGCAAATTTGTGAGGGATTCCAAATATGTCAAGGAGATCAAAGGGGAGCTGCTCCAAATCTTCCTTAACTaGCACCTCCGGAGCCGAGTC | + |
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Preference number: 4 (lower is better) Translates to: CKFVRDSKYVKEIKGELLQIFLN*HLRSRV Trigger: GACTCGGCTCCGGAGGTGGCAGTTAAGGAAGATTTG...GAGCAGCTCCCCTTTGATCTCCTTGACATATTTGGAATCCCTCACAAATTTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS-3UTR GCA 90 bp | TCTTTTCCCAAATGCAAATTTGTGAGGGATTCCAAATATGTCAAGGAGATCAAAGCAGCGGACACCGACTaGTCTCACTGTCCGAGTCCG | + |
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Preference number: 4 (lower is better) Translates to: SFPKCKFVRDSKYVKEIKAADTD*SHCPSP Trigger: CGGACTCGGACAGTGAGAGCAGTCGGTGTCCGCTGC...TTTGATCTCCTTGACATATTTGGAATCCCTCACAAATTTGCATTTGGGAAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS-3UTR GCA 90 bp | AAGCAGGAGAGCTCTTTTCCCAAATGCAAATTTGTGAGGGATTCCAAATATGTCGGCGATTTAGTCAAGTaGATGAGGGAGTCGGCGGCT | + |
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Preference number: 4 (lower is better) Translates to: KQESSFPKCKFVRDSKYVGDLVK*MRESAA Trigger: AGCCGCCGACTCCCTCATGCACTTGACTAAATCGCC...GACATATTTGGAATCCCTCACAAATTTGCATTTGGGAAAAGAGCTCTCCTGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS-3UTR GCA 90 bp | TGTCAAGGAGATCAAAGGGGAGCTGCTCTTGAGTTGAGGTCTGGACCTTCACCCTGTGAAGATAGGACCTaGCTTGATAGTCATACATTT | + |
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Preference number: 4 (lower is better) Translates to: CQGDQRGAALELRSGPSPCEDRT*LDSHTF Trigger: AAATGTATGACTATCAAGGCAGGTCCTATCTTCACA...GGGTGAAGGTCCAGACCTCAACTCAAGAGCAGCTCCCCTTTGATCTCCTTGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS-3UTR GCA 90 bp | TGTCAAGGAGATCAAAGGGGAGCTGCTCTTGAGTTGAGGTCTGGACCTTCACCCGCCACAAAGAGATTTTaGTTATCTTCATCAGGATTG | + |
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Preference number: 4 (lower is better) Translates to: CQGDQRGAALELRSGPSPATKRF*LSSSGL Trigger: CAATCCTGATGAAGATAAGCAAAATCTCTTTGTGGC...GGGTGAAGGTCCAGACCTCAACTCAAGAGCAGCTCCCCTTTGATCTCCTTGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS-3UTR TCA 90 bp | AAGCAGGAGAGCTCTTTTCCCAAATGCAAATTTGTGAGGGATTCCAAATATGTCAGTCACTGCAGGCATTaGGTGCATACTGGGTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: KQESSFPKCKFVRDSKYVSHCRH*VHTGFC Trigger: GCAGAACCCAGTATGCACTCAATGCCTGCAGTGACT...GACATATTTGGAATCCCTCACAAATTTGCATTTGGGAAAAGAGCTCTCCTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS-3UTR GCA 90 bp | TTTGTGAGGGATTCCAAATATGTCAAGGAGATCAAAGGGGAGCTGCTCTTGAGTCTAGGGGCAGCCATTTaGTGTGTCCTAAAGGGATTT | + |
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Preference number: 4 (lower is better) Translates to: FVRDSKYVKEIKGELLLSLGAAI*CVLKGF Trigger: AAATCCCTTTAGGACACAGCAAATGGCTGCCCCTAG...ACTCAAGAGCAGCTCCCCTTTGATCTCCTTGACATATTTGGAATCCCTCACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS-3UTR GCA 90 bp | TTTGTGAGGGATTCCAAATATGTCAAGGAGATCAAAGGGGAGCTGCTCTTGAGTATACCTGTCATAGGCTaGACTGAGGAACTGTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: FVRDSKYVKEIKGELLLSIPVIG*TEELCS Trigger: GGAACACAGTTCCTCAGTGCAGCCTATGACAGGTAT...ACTCAAGAGCAGCTCCCCTTTGATCTCCTTGACATATTTGGAATCCCTCACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS-3UTR GCA 90 bp | TTTGTGAGGGATTCCAAATATGTCAAGGAGATCAAAGGGGAGCTGCTCTTGAGTACTGCAGGCATTGAGTaGATACTGGGTTCTGCTATG | + |
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Preference number: 4 (lower is better) Translates to: FVRDSKYVKEIKGELLLSTAGIE*ILGSAM Trigger: CATAGCAGAACCCAGTATGCACTCAATGCCTGCAGT...ACTCAAGAGCAGCTCCCCTTTGATCTCCTTGACATATTTGGAATCCCTCACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS-3UTR TCA 90 bp | AAGCAGGAGAGCTCTTTTCCCAAATGCAAATTTGTGAGGGATTCCAAATATGTCGACTCTCATGTCTGGTaGAAAGTCCACCTGACAAGC | + |
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Preference number: 4 (lower is better) Translates to: KQESSFPKCKFVRDSKYVDSHVW*KVHLTS Trigger: GCTTGTCAGGTGGACTTTTCACCAGACATGAGAGTC...GACATATTTGGAATCCCTCACAAATTTGCATTTGGGAAAAGAGCTCTCCTGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS-3UTR GCA 90 bp | CAAATATGTCAAGGAGATCAAAGGGGAGCTGCTCTTGAGTTGAGGTCTGGACCTAGCTCTTTTCCCAAATaGAAATTTGTGAGGGATTCC | + |
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Preference number: 4 (lower is better) Translates to: QICQGDQRGAALELRSGPSSFPK*KFVRDS Trigger: GGAATCCCTCACAAATTTGCATTTGGGAAAAGAGCT...AGGTCCAGACCTCAACTCAAGAGCAGCTCCCCTTTGATCTCCTTGACATATTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS-3UTR GCA 90 bp | TGCAAATTTGTGAGGGATTCCAAATATGTCAAGGAGATCAAAGGGGAGCTGCTCTGCCGATCATATTCCTaGACAATTTCTCCACTTCGA | + |
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Preference number: 4 (lower is better) Translates to: CKFVRDSKYVKEIKGELLCRSYS*TISPLR Trigger: TCGAAGTGGAGAAATTGTGCAGGAATATGATCGGCA...GAGCAGCTCCCCTTTGATCTCCTTGACATATTTGGAATCCCTCACAAATTTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS-3UTR CCA 90 bp | TTTGTGAGGGATTCCAAATATGTCAAGGAGATCAAAGGGGAGCTGCTCTTGAGTTGGTTGTCCATTGATTaGCATGCTAGCCATTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: FVRDSKYVKEIKGELLLSWLSID*HASHFP Trigger: TGGAAAATGGCTAGCATGCCAATCAATGGACAACCA...ACTCAAGAGCAGCTCCCCTTTGATCTCCTTGACATATTTGGAATCCCTCACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS-3UTR TCA 90 bp | GCAGGAGAGCTCTTTTCCCAAATGCAAATTTGTGAGGGATTCCAAATATGTCAATATACTGAACTTCTTTaGCGGCAGGGTCAAGGTGAA | + |
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Preference number: 4 (lower is better) Translates to: AGELFSQMQICEGFQICQYTELL*RQGQGE Trigger: TTCACCTTGACCCTGCCGTCAAAGAAGTTCAGTATA...TTGACATATTTGGAATCCCTCACAAATTTGCATTTGGGAAAAGAGCTCTCCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS-3UTR TCA 90 bp | TTTGTGAGGGATTCCAAATATGTCAAGGAGATCAAAGGGGAGCTGCTCTTGAGTCTAACAGCCTTACTGTaGCCAATAAATGTTCTCAGA | + |
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Preference number: 4 (lower is better) Translates to: FVRDSKYVKEIKGELLLSLTALL*PINVLR Trigger: TCTGAGAACATTTATTGGTCACAGTAAGGCTGTTAG...ACTCAAGAGCAGCTCCCCTTTGATCTCCTTGACATATTTGGAATCCCTCACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS-3UTR TCA 90 bp | GCAGGAGAGCTCTTTTCCCAAATGCAAATTTGTGAGGGATTCCAAATATGTCAACAAAAACAATGGTGTTaGCAGCTCCCAAATGCCGAT | + |
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Preference number: 4 (lower is better) Translates to: AGELFSQMQICEGFQICQQKQWC*QLPNAD Trigger: ATCGGCATTTGGGAGCTGTCAACACCATTGTTTTTG...TTGACATATTTGGAATCCCTCACAAATTTGCATTTGGGAAAAGAGCTCTCCTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS-3UTR CCA 90 bp | CAAATATGTCAAGGAGATCAAAGGGGAGCTGCTCTTGAGTTGAGGTCTGGACCTGTAACATCATCCATTTaGGAAAATATCTATATGGCC | + |
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Preference number: 4 (lower is better) Translates to: QICQGDQRGAALELRSGPVTSSI*ENIYMA Trigger: GGCCATATAGATATTTTCCCAAATGGATGATGTTAC...AGGTCCAGACCTCAACTCAAGAGCAGCTCCCCTTTGATCTCCTTGACATATTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS-3UTR TCA 90 bp | TGCAAATTTGTGAGGGATTCCAAATATGTCAAGGAGATCAAAGGGGAGCTGCTCCCAAATGCAAATTTGTaGGGGATTCCAAATATGTCA | + |
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Preference number: 4 (lower is better) Translates to: CKFVRDSKYVKEIKGELLPNANL*GIPNMS Trigger: TGACATATTTGGAATCCCTCACAAATTTGCATTTGG...GAGCAGCTCCCCTTTGATCTCCTTGACATATTTGGAATCCCTCACAAATTTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS-3UTR TCA 90 bp | GAGAGCTCTTTTCCCAAATGCAAATTTGTGAGGGATTCCAAATATGTCAAGGAGATGAAATCATTGATATaGGCTGGTTCGGCATATCCA | + |
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Preference number: 4 (lower is better) Translates to: ESSFPKCKFVRDSKYVKEMKSLI*AGSAYP Trigger: TGGATATGCCGAACCAGCTCATATCAATGATTTCAT...CTCCTTGACATATTTGGAATCCCTCACAAATTTGCATTTGGGAAAAGAGCTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS-3UTR TCA 90 bp | GCAGGAGAGCTCTTTTCCCAAATGCAAATTTGTGAGGGATTCCAAATATGTCAATCGGTTTGTAAATCTTaGTATACACTGTCCTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: AGELFSQMQICEGFQICQSVCKS*YTLSCL Trigger: GAGACAGGACAGTGTATATCAAGATTTACAAACCGA...TTGACATATTTGGAATCCCTCACAAATTTGCATTTGGGAAAAGAGCTCTCCTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS-3UTR TCA 90 bp | CTCTTTTCCCAAATGCAAATTTGTGAGGGATTCCAAATATGTCAAGGAGATCAAGTTCTGCTATGTACTTaGAATCCACAGGGATATCCC | + |
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Preference number: 4 (lower is better) Translates to: LFSQMQICEGFQICQGDQVLLCT*NPQGYP Trigger: GGGATATCCCTGTGGATTTCAAGTACATAGCAGAAC...TTGATCTCCTTGACATATTTGGAATCCCTCACAAATTTGCATTTGGGAAAAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS-3UTR GCA 90 bp | CTCTTTTCCCAAATGCAAATTTGTGAGGGATTCCAAATATGTCAAGGAGATCAAGTGCATACTGGGTTCTaGTATGTACTTGAAATCCAC | + |
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Preference number: 4 (lower is better) Translates to: LFSQMQICEGFQICQGDQVHTGF*YVLEIH Trigger: GTGGATTTCAAGTACATAGCAGAACCCAGTATGCAC...TTGATCTCCTTGACATATTTGGAATCCCTCACAAATTTGCATTTGGGAAAAGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS-3UTR GCA 90 bp | TCTTTTCCCAAATGCAAATTTGTGAGGGATTCCAAATATGTCAAGGAGATCAAACTGACAAGCATAGCCTaGTACCATATGGCCCTTAAA | + |
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Preference number: 4 (lower is better) Translates to: SFPKCKFVRDSKYVKEIKLTSIA*YHMALK Trigger: TTTAAGGGCCATATGGTAGCAGGCTATGCTTGTCAG...TTTGATCTCCTTGACATATTTGGAATCCCTCACAAATTTGCATTTGGGAAAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS-3UTR CCA 90 bp | TCTTTTCCCAAATGCAAATTTGTGAGGGATTCCAAATATGTCAAGGAGATCAAACCTAAAGGGATTTTCTaGTCCAAACTCAGGAGCAAA | + |
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Preference number: 4 (lower is better) Translates to: SFPKCKFVRDSKYVKEIKPKGIF*SKLRSK Trigger: TTTGCTCCTGAGTTTGGACCAGAAAATCCCTTTAGG...TTTGATCTCCTTGACATATTTGGAATCCCTCACAAATTTGCATTTGGGAAAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS-3UTR TCA 90 bp | CTCTTTTCCCAAATGCAAATTTGTGAGGGATTCCAAATATGTCAAGGAGATCAATTTTTGCTCTTCTTCTaGAGGTTTGGCTACATCTTT | + |
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Preference number: 4 (lower is better) Translates to: LFSQMQICEGFQICQGDQFLLFF*RFGYIF Trigger: AAAGATGTAGCCAAACCTTCAGAAGAAGAGCAAAAA...TTGATCTCCTTGACATATTTGGAATCCCTCACAAATTTGCATTTGGGAAAAGAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS-3UTR GCA 90 bp | CTCTTTTCCCAAATGCAAATTTGTGAGGGATTCCAAATATGTCAAGGAGATCAAGCAAAAGTTCTCCTTTaGTGCTCAAACATGAAATCA | + |
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Preference number: 4 (lower is better) Translates to: LFSQMQICEGFQICQGDQAKVLL*CSNMKS Trigger: TGATTTCATGTTTGAGCAGCAAAGGAGAACTTTTGC...TTGATCTCCTTGACATATTTGGAATCCCTCACAAATTTGCATTTGGGAAAAGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS-3UTR GCA 90 bp | CTCTTTTCCCAAATGCAAATTTGTGAGGGATTCCAAATATGTCAAGGAGATCAATGCATAACCATATGTTaGAAAAGTTCTCCTTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: LFSQMQICEGFQICQGDQCITIC*KSSPLL Trigger: CAGCAAAGGAGAACTTTTGCAACATATGGTTATGCA...TTGATCTCCTTGACATATTTGGAATCCCTCACAAATTTGCATTTGGGAAAAGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS-3UTR CCA 90 bp | TCTTTTCCCAAATGCAAATTTGTGAGGGATTCCAAATATGTCAAGGAGATCAAAATCATTGATATGAGCTaGTTCGGCATATCCAGAAAG | + |
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Preference number: 4 (lower is better) Translates to: SFPKCKFVRDSKYVKEIKIIDMS*FGISRK Trigger: CTTTCTGGATATGCCGAACCAGCTCATATCAATGAT...TTTGATCTCCTTGACATATTTGGAATCCCTCACAAATTTGCATTTGGGAAAAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS TCA 90 bp | CAGCGGACACCGACTGCTCTCACTGTCCGAGTCCGATTCGGACCCTaGACCCGAACCATAGGAAGCGGCCAGAGCTGCAATCGCAGCCGA | + |
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Preference number: 5 (lower is better) Translates to: QRTPTALTVRVRFGP*TRTIGSGQSCNRSR Trigger: TCGGCTGCGATTGCAGCTCTGGCCGCTTCCTATGGTTCGGGTTCAGGGTCCGAATCGGACTCGGACAGTGAGAGCAGTCGGTGTCCGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000307731.2 ENST00000368930.5 ENST00000368932.5 ENST00000606893.5 |
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| CDS TCA 90 bp | AACCCGAACCATAGGAAGCGGCCAGAGCTGCAATCGCAGCCGACATaGCGGCAACAAATCTTCTGCGGAGACCCTGCCAGGGCGGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: NPNHRKRPELQSQPT*RQQIFCGDPARAEE Trigger: TTCTTCCGCCCTGGCAGGGTCTCCGCAGAAGATTTGTTGCCGTCATGTCGGCTGCGATTGCAGCTCTGGCCGCTTCCTATGGTTCGGGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368932.5 ENST00000606893.5 |
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| CDS GCA 90 bp | ACTGCCACTGCTAGAGACGGCTTTGATGAAGGCGATTTAGTCAAGTaGATGAGGGAGTCGGCGGCTGGCAGCGGACACCGACTGCTCTCA | + |
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Preference number: 5 (lower is better) Translates to: TATARDGFDEGDLVK*MRESAAGSGHRLLS Trigger: TGAGAGCAGTCGGTGTCCGCTGCCAGCCGCCGACTCCCTCATGCACTTGACTAAATCGCCTTCATCAAAGCCGTCTCTAGCAGTGGCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000307731.2 ENST00000368930.5 ENST00000368932.5 ENST00000606893.5 |
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| CDS GCA 90 bp | TGGACCTTCACCCACTTGCCATCCTCCTCACCCCTCCTGGGGACCTaGAGTCACCTCCTTCAGATTCTGAAAGCTCTGAGGGACTCTCAT | + |
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Preference number: 5 (lower is better) Translates to: WTFTHLPSSSPLLGT*SHLLQILKALRDSH Trigger: ATGAGAGTCCCTCAGAGCTTTCAGAATCTGAAGGAGGTGACTGCAGGTCCCCAGGAGGGGTGAGGAGGATGGCAAGTGGGTGAAGGTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS TCA 90 bp | GATTCCAAATATGTCAAGGAGATCAAAGGGGAGCTGCTCTTGAGTTaGGGTCTGGACCTTCACCCACTTGCCATCCTCCTCACCCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: DSKYVKEIKGELLLS*GLDLHPLAILLTPP Trigger: AGGAGGGGTGAGGAGGATGGCAAGTGGGTGAAGGTCCAGACCTCAACTCAAGAGCAGCTCCCCTTTGATCTCCTTGACATATTTGGAATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS-3UTR CAA 90 bp | TGTCAAGGAGATCAAAGGGGAGCTGCTCTTGAGTTGAGGTCTGGACCTTCACCCAAGTCACTGCAGGCATaGAGTGCATACTGGGTTCTG | + |
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Preference number: 5 (lower is better) Translates to: CQGDQRGAALELRSGPSPKSLQA*SAYWVL Trigger: CAGAACCCAGTATGCACTCAATGCCTGCAGTGACTT...GGGTGAAGGTCCAGACCTCAACTCAAGAGCAGCTCCCCTTTGATCTCCTTGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS-3UTR CAA 90 bp | TGCAAATTTGTGAGGGATTCCAAATATGTCAAGGAGATCAAAGGGGAGCTGCTCTGGACCTTCACCCACTaGCCATCCTCCTCACCCCTC | + |
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Preference number: 5 (lower is better) Translates to: CKFVRDSKYVKEIKGELLWTFTH*PSSSPL Trigger: GAGGGGTGAGGAGGATGGCAAGTGGGTGAAGGTCCA...GAGCAGCTCCCCTTTGATCTCCTTGACATATTTGGAATCCCTCACAAATTTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS TCA 90 bp | CACCTCCTTCAGATTCTGAAAGCTCTGAGGGACTCTCATGTCTGGTaGAAAGTCCACCTGACAAGCATAGCCTGCTACCATATGGCCCTT | + |
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Preference number: 5 (lower is better) Translates to: HLLQILKALRDSHVW*KVHLTSIACYHMAL Trigger: AAGGGCCATATGGTAGCAGGCTATGCTTGTCAGGTGGACTTTTCACCAGACATGAGAGTCCCTCAGAGCTTTCAGAATCTGAAGGAGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS GCA 90 bp | CTGTCCTGTCTCAGTGTCCCAGAGCTTAAGATACCTGTCATAGGCTaGACTGAGGAACTGTGTTCCTGCAGTATTGAAGCAGATATCCCT | + |
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Preference number: 5 (lower is better) Translates to: LSCLSVPELKIPVIG*TEELCSCSIEADIP Trigger: AGGGATATCTGCTTCAATACTGCAGGAACACAGTTCCTCAGTGCAGCCTATGACAGGTATCTTAAGCTCTGGGACACTGAGACAGGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000307731.2 ENST00000368930.5 ENST00000368932.5 ENST00000606893.5 |
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| CDS GCA 90 bp | GCTGGTTCGGCATATCCAGAAAGCATATTTCTAGGGGCAGCCATTTaGTGTGTCCTAAAGGGATTTTCTGGTCCAAACTCAGGAGCAAAC | + |
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Preference number: 5 (lower is better) Translates to: AGSAYPESIFLGAAI*CVLKGFSGPNSGAN Trigger: GTTTGCTCCTGAGTTTGGACCAGAAAATCCCTTTAGGACACAGCAAATGGCTGCCCCTAGAAATATGCTTTCTGGATATGCCGAACCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000307731.2 ENST00000368930.5 ENST00000368932.5 ENST00000606893.5 |
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| CDS GCA 90 bp | GAGCTTAAGATACCTGTCATAGGCTGCACTGAGGAACTGTGTTCCTaGAGTATTGAAGCAGATATCCCTAACAGCCTTACTGTGACCAAT | + |
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Preference number: 5 (lower is better) Translates to: ELKIPVIGCTEELCS*SIEADIPNSLTVTN Trigger: ATTGGTCACAGTAAGGCTGTTAGGGATATCTGCTTCAATACTGCAGGAACACAGTTCCTCAGTGCAGCCTATGACAGGTATCTTAAGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000307731.2 ENST00000368930.5 ENST00000368932.5 ENST00000606893.5 |
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| CDS GCA 90 bp | GCTAGCCATTTTCCATTTGGAGACAAAGTCACTGCAGGCATTGAGTaGATACTGGGTTCTGCTATGTACTTGAAATCCACAGGGATATCC | + |
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Preference number: 5 (lower is better) Translates to: ASHFPFGDKVTAGIE*ILGSAMYLKSTGIS Trigger: GGATATCCCTGTGGATTTCAAGTACATAGCAGAACCCAGTATGCACTCAATGCCTGCAGTGACTTTGTCTCCAAATGGAAAATGGCTAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000307731.2 ENST00000368930.5 ENST00000368932.5 ENST00000606893.5 |
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| CDS GCA 90 bp | GCTGGTTCGGCATATCCAGAAAGCATATTTCTAGGGGCAGCCATTTaGTGTGTCCTAAAGGGATTTTCTGGTCCAAACTTAAAGACATTG | + |
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Preference number: 5 (lower is better) Translates to: AGSAYPESIFLGAAI*CVLKGFSGPNLKTL Trigger: CAATGTCTTTAAGTTTGGACCAGAAAATCCCTTTAGGACACAGCAAATGGCTGCCCCTAGAAATATGCTTTCTGGATATGCCGAACCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000453107.5 |
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| CDS-3UTR CAA 90 bp | TGCAAATTTGTGAGGGATTCCAAATATGTCAAGGAGATCAAAGGGGAGCTGCTCCTAGCCATTTTCCATTaGGAGACAAAGTCACTGCAG | + |
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Preference number: 5 (lower is better) Translates to: CKFVRDSKYVKEIKGELLLAIFH*ETKSLQ Trigger: CTGCAGTGACTTTGTCTCCAAATGGAAAATGGCTAG...GAGCAGCTCCCCTTTGATCTCCTTGACATATTTGGAATCCCTCACAAATTTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS GCA 90 bp | CTCCTATTCTCATCCACAAAAACAATGGTGTTGACAGCTCCCAAATaGCGATCATATTCCTGCACAATTTCTCCACTTCGAATGTCCCAT | + |
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Preference number: 5 (lower is better) Translates to: LLFSSTKTMVLTAPK*RSYSCTISPLRMSH Trigger: ATGGGACATTCGAAGTGGAGAAATTGTGCAGGAATATGATCGGCATTTGGGAGCTGTCAACACCATTGTTTTTGTGGATGAGAATAGGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000307731.2 ENST00000368930.5 ENST00000368932.5 ENST00000606893.5 |
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| CDS-3UTR CAA 90 bp | GCAGGAGAGCTCTTTTCCCAAATGCAAATTTGTGAGGGATTCCAAATATGTCAAGGTTCTGCTATGTACTaGAAATCCACAGGGATATCC | + |
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Preference number: 5 (lower is better) Translates to: AGELFSQMQICEGFQICQGSAMY*KSTGIS Trigger: GGATATCCCTGTGGATTTCAAGTACATAGCAGAACC...TTGACATATTTGGAATCCCTCACAAATTTGCATTTGGGAAAAGAGCTCTCCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS GCA 90 bp | ACAAAAACAATGGTGTTGACAGCTCCCAAATGCCGATCATATTCCTaGACAATTTCTCCACTTCGAATGTCCCATTGCACAATCTTCTTA | + |
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Preference number: 5 (lower is better) Translates to: TKTMVLTAPKCRSYS*TISPLRMSHCTIFL Trigger: TAAGAAGATTGTGCAATGGGACATTCGAAGTGGAGAAATTGTGCAGGAATATGATCGGCATTTGGGAGCTGTCAACACCATTGTTTTTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000307731.2 ENST00000368930.5 ENST00000368932.5 ENST00000606893.5 |
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| CDS CCA 90 bp | AAAAGTTCTCCTTTGCTGCTCAAACATGAAATCATTGATATGAGCTaGTTCGGCATATCCAGAAAGCATATTTCTAGGGGCAGCCATTTG | + |
|
Preference number: 5 (lower is better) Translates to: KSSPLLLKHEIIDMS*FGISRKHISRGSHL Trigger: CAAATGGCTGCCCCTAGAAATATGCTTTCTGGATATGCCGAACCAGCTCATATCAATGATTTCATGTTTGAGCAGCAAAGGAGAACTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000307731.2 ENST00000368930.5 ENST00000368932.5 ENST00000453107.5 ENST00000606893.5 |
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| CDS-3UTR CAA 90 bp | TCTTTTCCCAAATGCAAATTTGTGAGGGATTCCAAATATGTCAAGGAGATCAAATCTAGGGGCAGCCATTaGCTGTGTCCTAAAGGGATT | + |
|
Preference number: 5 (lower is better) Translates to: SFPKCKFVRDSKYVKEIKSRGSH*LCPKGI Trigger: AATCCCTTTAGGACACAGCAAATGGCTGCCCCTAGA...TTTGATCTCCTTGACATATTTGGAATCCCTCACAAATTTGCATTTGGGAAAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS-3UTR CAA 90 bp | TCTTTTCCCAAATGCAAATTTGTGAGGGATTCCAAATATGTCAAGGAGATCAAAACAAAAACAATGGTGTaGACAGCTCCCAAATGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: SFPKCKFVRDSKYVKEIKTKTMV*TAPKCR Trigger: TCGGCATTTGGGAGCTGTCAACACCATTGTTTTTGT...TTTGATCTCCTTGACATATTTGGAATCCCTCACAAATTTGCATTTGGGAAAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS-3UTR CAA 90 bp | CTCTTTTCCCAAATGCAAATTTGTGAGGGATTCCAAATATGTCAAGGAGATCAAACTTCGAATGTCCCATaGCACAATCTTCTTATCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LFSQMQICEGFQICQGDQTSNVP*HNLLIR Trigger: TCTGATAAGAAGATTGTGCAATGGGACATTCGAAGT...TTGATCTCCTTGACATATTTGGAATCCCTCACAAATTTGCATTTGGGAAAAGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS-3UTR CAA 90 bp | TCTTTTCCCAAATGCAAATTTGTGAGGGATTCCAAATATGTCAAGGAGATCAAAAGATTTGGTTGTCCATaGATTGGCATGCTAGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: SFPKCKFVRDSKYVKEIKRFGCP*IGMLAI Trigger: AATGGCTAGCATGCCAATCAATGGACAACCAAATCT...TTTGATCTCCTTGACATATTTGGAATCCCTCACAAATTTGCATTTGGGAAAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS-3UTR CAA 90 bp | TCTTTTCCCAAATGCAAATTTGTGAGGGATTCCAAATATGTCAAGGAGATCAAATCTTCTTCTGAAGGTTaGGCTACATCTTTTTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: SFPKCKFVRDSKYVKEIKSSSEG*ATSFSS Trigger: GGATGAAAAAGATGTAGCCAAACCTTCAGAAGAAGA...TTTGATCTCCTTGACATATTTGGAATCCCTCACAAATTTGCATTTGGGAAAAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS CCA 72 bp | AGGCGATTTAGTCAAGTGCATGAGGGAGTCGGCGGCTaGCAGCGGACACCGACTGCTCTCACTGTCCGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: RRFSQVHEGVGG*QRTPTALTVRV Trigger: GACTCGGACAGTGAGAGCAGTCGGTGTCCGCTGCCAGCCGCCGACTCCCTCATGCACTTGACTAAATCGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000307731.2 ENST00000368930.5 ENST00000368932.5 ENST00000606893.5 |
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| CDS TCA 72 bp | CCGACTGCTCTCACTGTCCGAGTCCGATTCGGACCCTaGACCCGAACCATAGGAAGCGGCCAGAGCTGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: PTALTVRVRFGP*TRTIGSGQSCN Trigger: ATTGCAGCTCTGGCCGCTTCCTATGGTTCGGGTTCAGGGTCCGAATCGGACTCGGACAGTGAGAGCAGTCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000307731.2 ENST00000368930.5 ENST00000368932.5 ENST00000606893.5 |
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| CDS TCA 72 bp | CATAGGAAGCGGCCAGAGCTGCAATCGCAGCCGACATaGCGGCAACAAATCTTCTGCGGAGACCCTGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: HRKRPELQSQPT*RQQIFCGDPAR Trigger: CCTGGCAGGGTCTCCGCAGAAGATTTGTTGCCGTCATGTCGGCTGCGATTGCAGCTCTGGCCGCTTCCTATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368932.5 ENST00000606893.5 |
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| CDS CAA 90 bp | GGATTCCAAATATGTCAAGGAGATCAAAGGGGAGCTGCTCTTGAGTaGAGGTCTGGACCTTCACCCACTTGCCATCCTCCTCACCCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GFQICQGDQRGAALE*RSGPSPTCHPPHPS Trigger: GGAGGGGTGAGGAGGATGGCAAGTGGGTGAAGGTCCAGACCTCAACTCAAGAGCAGCTCCCCTTTGATCTCCTTGACATATTTGGAATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS TCA 72 bp | TATGTCAAGGAGATCAAAGGGGAGCTGCTCTTGAGTTaGGGTCTGGACCTTCACCCACTTGCCATCCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: YVKEIKGELLLS*GLDLHPLAILL Trigger: GAGGAGGATGGCAAGTGGGTGAAGGTCCAGACCTCAACTCAAGAGCAGCTCCCCTTTGATCTCCTTGACATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS CAA 72 bp | ATATGTCAAGGAGATCAAAGGGGAGCTGCTCTTGAGTaGAGGTCTGGACCTTCACCCACTTGCCATCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: ICQGDQRGAALE*RSGPSPTCHPP Trigger: AGGAGGATGGCAAGTGGGTGAAGGTCCAGACCTCAACTCAAGAGCAGCTCCCCTTTGATCTCCTTGACATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS TCA 72 bp | CAGATTCTGAAAGCTCTGAGGGACTCTCATGTCTGGTaGAAAGTCCACCTGACAAGCATAGCCTGCTACCAT | + |
|
Preference number: 6 (lower is better) Translates to: QILKALRDSHVW*KVHLTSIACYH Trigger: ATGGTAGCAGGCTATGCTTGTCAGGTGGACTTTTCACCAGACATGAGAGTCCCTCAGAGCTTTCAGAATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368930.5 |
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| CDS GCA 72 bp | CTCAGTGTCCCAGAGCTTAAGATACCTGTCATAGGCTaGACTGAGGAACTGTGTTCCTGCAGTATTGAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: LSVPELKIPVIG*TEELCSCSIEA Trigger: TGCTTCAATACTGCAGGAACACAGTTCCTCAGTGCAGCCTATGACAGGTATCTTAAGCTCTGGGACACTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000307731.2 ENST00000368930.5 ENST00000368932.5 ENST00000606893.5 |
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| CDS CAA 90 bp | AGCTGGTTCGGCATATCCAGAAAGCATATTTCTAGGGGCAGCCATTaGCTGTGTCCTAAAGGGATTTTCTGGTCCAAACTCAGGAGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: SWFGISRKHISRGSH*LCPKGIFWSKLRSK Trigger: TTTGCTCCTGAGTTTGGACCAGAAAATCCCTTTAGGACACAGCAAATGGCTGCCCCTAGAAATATGCTTTCTGGATATGCCGAACCAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000307731.2 ENST00000368930.5 ENST00000368932.5 ENST00000606893.5 |
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| CDS CAA 72 bp | GGCATATCCAGAAAGCATATTTCTAGGGGCAGCCATTaGCTGTGTCCTAAAGGGATTTTCTGGTCCAAACTC | + |
|
Preference number: 6 (lower is better) Translates to: GISRKHISRGSH*LCPKGIFWSKL Trigger: GAGTTTGGACCAGAAAATCCCTTTAGGACACAGCAAATGGCTGCCCCTAGAAATATGCTTTCTGGATATGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000307731.2 ENST00000368930.5 ENST00000368932.5 ENST00000606893.5 |
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| CDS CAA 72 bp | GCAGGCATTGAGTGCATACTGGGTTCTGCTATGTACTaGAAATCCACAGGGATATCCCATTCCCAAACTCTT | + |
|
Preference number: 6 (lower is better) Translates to: AGIECILGSAMY*KSTGISHSQTL Trigger: AAGAGTTTGGGAATGGGATATCCCTGTGGATTTCAAGTACATAGCAGAACCCAGTATGCACTCAATGCCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000307731.2 ENST00000368930.5 ENST00000368932.5 ENST00000606893.5 |
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| CDS TCA 72 bp | CAGGCATTGAGTGCATACTGGGTTCTGCTATGTACTTaGAATCCACAGGGATATCCCATTCCCAAACTCTTA | + |
|
Preference number: 6 (lower is better) Translates to: QALSAYWVLLCT*NPQGYPIPKLL Trigger: TAAGAGTTTGGGAATGGGATATCCCTGTGGATTTCAAGTACATAGCAGAACCCAGTATGCACTCAATGCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000307731.2 ENST00000368930.5 ENST00000368932.5 ENST00000606893.5 |
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| CDS GCA 72 bp | GCATATCCAGAAAGCATATTTCTAGGGGCAGCCATTTaGTGTGTCCTAAAGGGATTTTCTGGTCCAAACTCA | + |
|
Preference number: 6 (lower is better) Translates to: AYPESIFLGAAI*CVLKGFSGPNS Trigger: TGAGTTTGGACCAGAAAATCCCTTTAGGACACAGCAAATGGCTGCCCCTAGAAATATGCTTTCTGGATATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000307731.2 ENST00000368930.5 ENST00000368932.5 ENST00000606893.5 |
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| CDS CAA 72 bp | GGCATATCCAGAAAGCATATTTCTAGGGGCAGCCATTaGCTGTGTCCTAAAGGGATTTTCTGGTCCAAACTT | + |
|
Preference number: 6 (lower is better) Translates to: GISRKHISRGSH*LCPKGIFWSKL Trigger: AAGTTTGGACCAGAAAATCCCTTTAGGACACAGCAAATGGCTGCCCCTAGAAATATGCTTTCTGGATATGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000453107.5 |
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| CDS CAA 90 bp | AGCTGGTTCGGCATATCCAGAAAGCATATTTCTAGGGGCAGCCATTaGCTGTGTCCTAAAGGGATTTTCTGGTCCAAACTTAAAGACATT | + |
|
Preference number: 6 (lower is better) Translates to: SWFGISRKHISRGSH*LCPKGIFWSKLKDI Trigger: AATGTCTTTAAGTTTGGACCAGAAAATCCCTTTAGGACACAGCAAATGGCTGCCCCTAGAAATATGCTTTCTGGATATGCCGAACCAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000453107.5 |
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| CDS TCA 72 bp | CCATTTTCCATTTGGAGACAAAGTCACTGCAGGCATTaGGTGCATACTGGGTTCTGCTATGTACTTGAAATC | + |
|
Preference number: 6 (lower is better) Translates to: PFSIWRQSHCRH*VHTGFCYVLEI Trigger: GATTTCAAGTACATAGCAGAACCCAGTATGCACTCAATGCCTGCAGTGACTTTGTCTCCAAATGGAAAATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000307731.2 ENST00000368930.5 ENST00000368932.5 ENST00000606893.5 |
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| CDS GCA 72 bp | TTTCCATTTGGAGACAAAGTCACTGCAGGCATTGAGTaGATACTGGGTTCTGCTATGTACTTGAAATCCACA | + |
|
Preference number: 6 (lower is better) Translates to: FPFGDKVTAGIE*ILGSAMYLKST Trigger: TGTGGATTTCAAGTACATAGCAGAACCCAGTATGCACTCAATGCCTGCAGTGACTTTGTCTCCAAATGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000307731.2 ENST00000368930.5 ENST00000368932.5 ENST00000606893.5 |
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| CDS GCA 72 bp | GCATATCCAGAAAGCATATTTCTAGGGGCAGCCATTTaGTGTGTCCTAAAGGGATTTTCTGGTCCAAACTTA | + |
|
Preference number: 6 (lower is better) Translates to: AYPESIFLGAAI*CVLKGFSGPNL Trigger: TAAGTTTGGACCAGAAAATCCCTTTAGGACACAGCAAATGGCTGCCCCTAGAAATATGCTTTCTGGATATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000453107.5 |
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| CDS CCA 72 bp | CCTTTGCTGCTCAAACATGAAATCATTGATATGAGCTaGTTCGGCATATCCAGAAAGCATATTTCTAGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: PLLLKHEIIDMS*FGISRKHISRG Trigger: GCCCCTAGAAATATGCTTTCTGGATATGCCGAACCAGCTCATATCAATGATTTCATGTTTGAGCAGCAAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000307731.2 ENST00000368930.5 ENST00000368932.5 ENST00000453107.5 ENST00000606893.5 |
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| CDS TCA 72 bp | GTTCTCCTTTGCTGCTCAAACATGAAATCATTGATATaGGCTGGTTCGGCATATCCAGAAAGCATATTTCTA | + |
|
Preference number: 6 (lower is better) Translates to: VLLCCSNMKSLI*AGSAYPESIFL Trigger: TAGAAATATGCTTTCTGGATATGCCGAACCAGCTCATATCAATGATTTCATGTTTGAGCAGCAAAGGAGAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000307731.2 ENST00000368930.5 ENST00000368932.5 ENST00000453107.5 ENST00000606893.5 |
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| CDS CCA 72 bp | TGTGCTCCAAAAATTAAGATTTGGTTGTCCATTGATTaGCATGCTAGCCATTTTCCATTTGGAGACAAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: CAPKIKIWLSID*HASHFPFGDKV Trigger: GACTTTGTCTCCAAATGGAAAATGGCTAGCATGCCAATCAATGGACAACCAAATCTTAATTTTTGGAGCACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000307731.2 ENST00000368930.5 ENST00000368932.5 ENST00000606893.5 |
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| CDS CCA 72 bp | CACTGTGGCATAATTATAGCAAGGGAAGATAATACTTaGGCCTTGTTAGTCACTGGTAAAGAAGCAGAAATA | + |
|
Preference number: 6 (lower is better) Translates to: HCGIIIAREDNT*ALLVTGKEAEI Trigger: TATTTCTGCTTCTTTACCAGTGACTAACAAGGCCCAAGTATTATCTTCCCTTGCTATAATTATGCCACAGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000606893.5 |
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| CDS CAA 72 bp | TGTTCTGTGCTCCAAAAATTAAGATTTGGTTGTCCATaGATTGGCATGCTAGCCATTTTCCATTTGGAGACA | + |
|
Preference number: 6 (lower is better) Translates to: CSVLQKLRFGCP*IGMLAIFHLET Trigger: TGTCTCCAAATGGAAAATGGCTAGCATGCCAATCAATGGACAACCAAATCTTAATTTTTGGAGCACAGAACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000307731.2 ENST00000368930.5 ENST00000368932.5 ENST00000606893.5 |
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| CDS CAA 72 bp | GGCATAATTATAGCAAGGGAAGATAATACTTGGGCCTaGTTAGTCACTGGTAAAGAAGCAGAAATAAAACAG | + |
|
Preference number: 6 (lower is better) Translates to: GIIIAREDNTWA*LVTGKEAEIKQ Trigger: CTGTTTTATTTCTGCTTCTTTACCAGTGACTAACAAGGCCCAAGTATTATCTTCCCTTGCTATAATTATGCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000606893.5 |
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