Pregenerated sensors for CD300C (Homo sapiens)
Ensembl gene IDs: ENSG00000167850Ensembl transcript IDs: ENST00000330793.2
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCTGTGAAAACGGTGGAGGAAGCAGTGCCAGGCTCCTGGAGAAATaGAAGGGTGCAGGGAGGGCATCCGGGCACTCAGAGGTATTGCTG | + |
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Preference number: 1 (lower is better) Translates to: PCENGGGSSARLLEK*KGAGRASGHSEVLL Trigger: CAGCAATACCTCTGAGTGCCCGGATGCCCTCCCTGCACCCTTCCATTTCTCCAGGAGCCTGGCACTGCTTCCTCCACCGTTTTCACAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| 3UTR CCA 90 bp | CGCATATTCTACACTCCTGGACCCAGGGAGTGTGGGCCATTATGGTaGCAAAGGTGCAGGGGAGTCCTAGACCTGCTTCTCCCTGTGAAA | + |
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Preference number: 1 (lower is better) Translates to: RIFYTPGPRECGPLW*QRCRGVLDLLLPVK Trigger: TTTCACAGGGAGAAGCAGGTCTAGGACTCCCCTGCACCTTTGCCACCATAATGGCCCACACTCCCTGGGTCCAGGAGTGTAGAATATGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| 3UTR-3UTR TCA 90 bp | AAACGGTGGAGGAAGCAGTGCCAGGCTCCTGGAGAAATGGAAGGGTGCAGGGAGCGTCAGGTTCACATGTaGCACATGAGGATCGGGCAC | + |
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Preference number: 2 (lower is better) Translates to: KRWRKQCQAPGEMEGCRERQVHM*HMRIGH Trigger: GTGCCCGATCCTCATGTGTCACATGTGAACCTGACG...CTCCCTGCACCCTTCCATTTCTCCAGGAGCCTGGCACTGCTTCCTCCACCGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| 3UTR-3UTR GCA 90 bp | CAAATGGAAGCAGCCGCATATTCTACACTCCTGGACCCAGGGAGTGTGGGCCATCGGTGGAGGAAGCAGTaGCAGGCTCCTGGAGAAATG | + |
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Preference number: 2 (lower is better) Translates to: QMEAAAYSTLLDPGSVGHRWRKQ*QAPGEM Trigger: CATTTCTCCAGGAGCCTGGCACTGCTTCCTCCACCG...ATGGCCCACACTCCCTGGGTCCAGGAGTGTAGAATATGCGGCTGCTTCCATTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| 3UTR-3UTR CCA 90 bp | TCGACACACTCAGCAAATGGAAGCAGCCGCATATTCTACACTCCTGGACCCAGGGCAGTGCCAGGCTCCTaGAGAAATGGAAGGGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: STHSANGSSRIFYTPGPRAVPGS*RNGRVQ Trigger: CTGCACCCTTCCATTTCTCCAGGAGCCTGGCACTGC...CCTGGGTCCAGGAGTGTAGAATATGCGGCTGCTTCCATTTGCTGAGTGTGTCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| 3UTR-3UTR CCA 90 bp | AATCGACACACTCAGCAAATGGAAGCAGCCGCATATTCTACACTCCTGGACCCAGAGTGTGGGCCATTATaGTGGCAAAGGTGCAGGGGA | + |
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Preference number: 2 (lower is better) Translates to: NRHTQQMEAAAYSTLLDPECGPL*WQRCRG Trigger: TCCCCTGCACCTTTGCCACCATAATGGCCCACACTC...TGGGTCCAGGAGTGTAGAATATGCGGCTGCTTCCATTTGCTGAGTGTGTCGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| 3UTR-3UTR TCA 90 bp | ATTGAATCGACACACTCAGCAAATGGAAGCAGCCGCATATTCTACACTCCTGGAACCTGCTTCTCCCTGTaGAAACGGTGGAGGAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: IESTHSANGSSRIFYTPGTCFSL*KRWRKQ Trigger: CTGCTTCCTCCACCGTTTTCACAGGGAGAAGCAGGT...TCCAGGAGTGTAGAATATGCGGCTGCTTCCATTTGCTGAGTGTGTCGATTCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| 3UTR CCA 72 bp | CCTGTGAAAACGGTGGAGGAAGCAGTGCCAGGCTCCTaGAGAAATGGAAGGGTGCAGGGAGGGCATCCGGGC | + |
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Preference number: 3 (lower is better) Translates to: PVKTVEEAVPGS*RNGRVQGGHPG Trigger: GCCCGGATGCCCTCCCTGCACCCTTCCATTTCTCCAGGAGCCTGGCACTGCTTCCTCCACCGTTTTCACAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| 3UTR CCA 72 bp | TACACTCCTGGACCCAGGGAGTGTGGGCCATTATGGTaGCAAAGGTGCAGGGGAGTCCTAGACCTGCTTCTC | + |
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Preference number: 3 (lower is better) Translates to: YTPGPRECGPLW*QRCRGVLDLLL Trigger: GAGAAGCAGGTCTAGGACTCCCCTGCACCTTTGCCACCATAATGGCCCACACTCCCTGGGTCCAGGAGTGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| 3UTR CCA 72 bp | TTCTACACTCCTGGACCCAGGGAGTGTGGGCCATTATaGTGGCAAAGGTGCAGGGGAGTCCTAGACCTGCTT | + |
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Preference number: 3 (lower is better) Translates to: FYTPGPRECGPL*WQRCRGVLDLL Trigger: AAGCAGGTCTAGGACTCCCCTGCACCTTTGCCACCATAATGGCCCACACTCCCTGGGTCCAGGAGTGTAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| CDS-3UTR CCA 90 bp | AAGGGTGCAGGGAGGGCATCCGGGCACTCAGAGGTATTGCTGACGGCCCGAGGCAGGGAGAGAGCCGCCTaGGCTGAGGCCGGTGCTGAC | + |
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Preference number: 4 (lower is better) Translates to: KGAGRASGHSEVLLTARGRERAA*AEAGAD Trigger: GTCAGCACCGGCCTCAGCCCAGGCGGCTCTCTCCCT...GCCTCGGGCCGTCAGCAATACCTCTGAGTGCCCGGATGCCCTCCCTGCACCCTT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| 3UTR CAA 72 bp | AAGGGTGCAGGGAGGGCATCCGGGCACTCAGAGGTATaGCTGACGGCCCGAGGCTTAGCTGGCCGGGGCGTG | + |
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Preference number: 4 (lower is better) Translates to: KGAGRASGHSEV*LTARGLAGRGV Trigger: CACGCCCCGGCCAGCTAAGCCTCGGGCCGTCAGCAATACCTCTGAGTGCCCGGATGCCCTCCCTGCACCCTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| CDS-3UTR GCA 90 bp | AAGGGTGCAGGGAGGGCATCCGGGCACTCAGAGGTATTGCTGACGGCCCGAGGCACGCTGGGCCAGGTGTaGACGGGCAGCTTCGTGGGA | + |
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Preference number: 4 (lower is better) Translates to: KGAGRASGHSEVLLTARGTLGQV*TGSFVG Trigger: TCCCACGAAGCTGCCCGTGCACACCTGGCCCAGCGT...GCCTCGGGCCGTCAGCAATACCTCTGAGTGCCCGGATGCCCTCCCTGCACCCTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| CDS-3UTR CCA 90 bp | TGCCAGGCTCCTGGAGAAATGGAAGGGTGCAGGGAGGGCATCCGGGCACTCAGATGGAGCTCTGGGGGCTaGAGGCTGTGGTCGTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: CQAPGEMEGCREGIRALRWSSGG*RLWSSR Trigger: CCGGGACGACCACAGCCTCCAGCCCCCAGAGCTCCA...TCTGAGTGCCCGGATGCCCTCCCTGCACCCTTCCATTTCTCCAGGAGCCTGGCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| CDS-3UTR CCA 90 bp | AAACGGTGGAGGAAGCAGTGCCAGGCTCCTGGAGAAATGGAAGGGTGCAGGGAGGGGGGCTGGAGGCTGTaGTCGTCCCGGCCGGGAACA | + |
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Preference number: 4 (lower is better) Translates to: KRWRKQCQAPGEMEGCREGGWRL*SSRPGT Trigger: TGTTCCCGGCCGGGACGACCACAGCCTCCAGCCCCC...CTCCCTGCACCCTTCCATTTCTCCAGGAGCCTGGCACTGCTTCCTCCACCGTTT 64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| CDS-3UTR GCA 90 bp | TGCCAGGCTCCTGGAGAAATGGAAGGGTGCAGGGAGGGCATCCGGGCACTCAGATCCCTTGGGTGGCGATaGAGCCACTTCCCCACAGCC | + |
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Preference number: 4 (lower is better) Translates to: CQAPGEMEGCREGIRALRSLGWR*SHFPTA Trigger: GGCTGTGGGGAAGTGGCTGCATCGCCACCCAAGGGA...TCTGAGTGCCCGGATGCCCTCCCTGCACCCTTCCATTTCTCCAGGAGCCTGGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| CDS-3UTR CCA 90 bp | CCTGGACCCAGGGAGTGTGGGCCATTATGGTGGCAAAGGTGCAGGGGAGTCCTAGTGCCCATGGAGCTCTaGGGGCTGGAGGCTGTGGTC | + |
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Preference number: 4 (lower is better) Translates to: PGPRECGPLWWQRCRGVLVPMEL*GLEAVV Trigger: GACCACAGCCTCCAGCCCCCAGAGCTCCATGGGCAC...TAGGACTCCCCTGCACCTTTGCCACCATAATGGCCCACACTCCCTGGGTCCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| CDS-3UTR TCA 90 bp | GGCATCCGGGCACTCAGAGGTATTGCTGACGGCCCGAGGCTTAGCTGGCCGGGGCTGACTGAGTGGGCCTaGTACATCCCAAACCTACAC | + |
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Preference number: 4 (lower is better) Translates to: GIRALRGIADGPRLSWPGLTEWA*YIPNLH Trigger: GTGTAGGTTTGGGATGTATCAGGCCCACTCAGTCAG...CCCCGGCCAGCTAAGCCTCGGGCCGTCAGCAATACCTCTGAGTGCCCGGATGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| CDS-3UTR GCA 90 bp | GGCATCCGGGCACTCAGAGGTATTGCTGACGGCCCGAGGCTTAGCTGGCCGGGGAACACGAATGTCACCTaGCACTGTGCAAGACCCCAG | + |
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Preference number: 4 (lower is better) Translates to: GIRALRGIADGPRLSWPGNTNVT*HCARPQ Trigger: CTGGGGTCTTGCACAGTGGCAGGTGACATTCGTGTT...CCCCGGCCAGCTAAGCCTCGGGCCGTCAGCAATACCTCTGAGTGCCCGGATGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| CDS-3UTR GCA 90 bp | CCTGGAGAAATGGAAGGGTGCAGGGAGGGCATCCGGGCACTCAGAGGTATTGCTGGACGGCACCCAGCATaGTCAGGAGCAGGGGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: PGEMEGCREGIRALRGIAGRHPA*SGAGAA Trigger: AGCTGCCCCTGCTCCTGAGCATGCTGGGTGCCGTCC...AGCAATACCTCTGAGTGCCCGGATGCCCTCCCTGCACCCTTCCATTTCTCCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| CDS-3UTR CCA 90 bp | GCCAGGCTCCTGGAGAAATGGAAGGGTGCAGGGAGGGCATCCGGGCACTCAGAGGCAGTGCCAGGCTCCTaGAGAAATGGAAGGGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: ARLLEKWKGAGRASGHSEAVPGS*RNGRVQ Trigger: CTGCACCCTTCCATTTCTCCAGGAGCCTGGCACTGC...CTCTGAGTGCCCGGATGCCCTCCCTGCACCCTTCCATTTCTCCAGGAGCCTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| CDS-3UTR CCA 90 bp | AAGGTGCAGGGGAGTCCTAGACCTGCTTCTCCCTGTGAAAACGGTGGAGGAAGCCCAGGGTCCCTTGGGTaGCGATGCAGCCACTTCCCC | + |
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Preference number: 4 (lower is better) Translates to: KVQGSPRPASPCENGGGSPGSLG*RCSHFP Trigger: GGGGAAGTGGCTGCATCGCCACCCAAGGGACCCTGG...GCTTCCTCCACCGTTTTCACAGGGAGAAGCAGGTCTAGGACTCCCCTGCACCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| CDS-3UTR CCA 90 bp | AAGGTGCAGGGGAGTCCTAGACCTGCTTCTCCCTGTGAAAACGGTGGAGGAAGCGCACGGGCAGCTTCGTaGGAGGACCTGAGGTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: KVQGSPRPASPCENGGGSARAAS*EDLRCP Trigger: TGGGCACCTCAGGTCCTCCCACGAAGCTGCCCGTGC...GCTTCCTCCACCGTTTTCACAGGGAGAAGCAGGTCTAGGACTCCCCTGCACCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| CDS-3UTR TCA 90 bp | AAACGGTGGAGGAAGCAGTGCCAGGCTCCTGGAGAAATGGAAGGGTGCAGGGAGGGCTCCTCTCAACCCTaGCGTCTGGCAAAGTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: KRWRKQCQAPGEMEGCREGSSQP*RLAKSR Trigger: CCTGGACTTTGCCAGACGTCAGGGTTGAGAGGAGCC...CTCCCTGCACCCTTCCATTTCTCCAGGAGCCTGGCACTGCTTCCTCCACCGTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| CDS-3UTR TCA 90 bp | GCCAGGCTCCTGGAGAAATGGAAGGGTGCAGGGAGGGCATCCGGGCACTCAGAGTCCTCCCAGCAGATCTaGGCTTCGCTTCTGCTTTTC | + |
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Preference number: 4 (lower is better) Translates to: ARLLEKWKGAGRASGHSESSQQI*ASLLLF Trigger: GAAAAGCAGAAGCGAAGCTCAGATCTGCTGGGAGGA...CTCTGAGTGCCCGGATGCCCTCCCTGCACCCTTCCATTTCTCCAGGAGCCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| CDS-3UTR TCA 90 bp | CAAATGGAAGCAGCCGCATATTCTACACTCCTGGACCCAGGGAGTGTGGGCCATCAGGAGGAGCAGAGCTaGAGACCGCCACGAGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: QMEAAAYSTLLDPGSVGHQEEQS*RPPRGP Trigger: TGGGCCTCGTGGCGGTCTTCAGCTCTGCTCCTCCTG...ATGGCCCACACTCCCTGGGTCCAGGAGTGTAGAATATGCGGCTGCTTCCATTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| CDS-3UTR CCA 90 bp | CAAATGGAAGCAGCCGCATATTCTACACTCCTGGACCCAGGGAGTGTGGGCCATGACCTGAGGTGCCCATaGAGCTCTGGGGGCTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: QMEAAAYSTLLDPGSVGHDLRCP*SSGGWR Trigger: CCTCCAGCCCCCAGAGCTCCATGGGCACCTCAGGTC...ATGGCCCACACTCCCTGGGTCCAGGAGTGTAGAATATGCGGCTGCTTCCATTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| CDS-3UTR CCA 90 bp | TGCCAGGCTCCTGGAGAAATGGAAGGGTGCAGGGAGGGCATCCGGGCACTCAGAGAGTGTGGGCCATTATaGTGGCAAAGGTGCAGGGGA | + |
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Preference number: 4 (lower is better) Translates to: CQAPGEMEGCREGIRALRECGPL*WQRCRG Trigger: TCCCCTGCACCTTTGCCACCATAATGGCCCACACTC...TCTGAGTGCCCGGATGCCCTCCCTGCACCCTTCCATTTCTCCAGGAGCCTGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| CDS-3UTR CCA 90 bp | TGCCAGGCTCCTGGAGAAATGGAAGGGTGCAGGGAGGGCATCCGGGCACTCAGACAGAGGAAAATAGCCTaGGACAAGCAGGAGGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: CQAPGEMEGCREGIRALRQRKIA*DKQEEQ Trigger: CTGCTCCTCCTGCTTGTCCCAGGCTATTTTCCTCTG...TCTGAGTGCCCGGATGCCCTCCCTGCACCCTTCCATTTCTCCAGGAGCCTGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| CDS-3UTR CCA 90 bp | AAGGTGCAGGGGAGTCCTAGACCTGCTTCTCCCTGTGAAAACGGTGGAGGAAGCGGCCCGCCACGGTCATaGGGTGGCTCAGAGGAAAAT | + |
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Preference number: 4 (lower is better) Translates to: KVQGSPRPASPCENGGGSGPPRS*GGSEEN Trigger: ATTTTCCTCTGAGCCACCCCATGACCGTGGCGGGCC...GCTTCCTCCACCGTTTTCACAGGGAGAAGCAGGTCTAGGACTCCCCTGCACCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| CDS-3UTR CCA 90 bp | GAAGCAGCCGCATATTCTACACTCCTGGACCCAGGGAGTGTGGGCCATTATGGTCCTTTCTGGTCACGCTaGGCCAGGTGTGCACGGGCA | + |
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Preference number: 4 (lower is better) Translates to: EAAAYSTLLDPGSVGHYGPFWSR*ARCARA Trigger: TGCCCGTGCACACCTGGCCCAGCGTGACCAGAAAGG...ACCATAATGGCCCACACTCCCTGGGTCCAGGAGTGTAGAATATGCGGCTGCTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| CDS-3UTR GCA 90 bp | AACGGTGGAGGAAGCAGTGCCAGGCTCCTGGAGAAATGGAAGGGTGCAGGGAGGCCCTTGGGCCAATTCTaGCTGCTTCTAGAGCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: NGGGSSARLLEKWKGAGRPLGQF*LLLELL Trigger: GAGAAGCTCTAGAAGCAGGCAGAATTGGCCCAAGGG...CCTCCCTGCACCCTTCCATTTCTCCAGGAGCCTGGCACTGCTTCCTCCACCGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| CDS-3UTR TCA 90 bp | TCGACACACTCAGCAAATGGAAGCAGCCGCATATTCTACACTCCTGGACCCAGGGGAAGCGGACATTGCTaGACAGGGAGCCAGGGTGTG | + |
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Preference number: 4 (lower is better) Translates to: STHSANGSSRIFYTPGPRGSGHC*TGSQGV Trigger: CACACCCTGGCTCCCTGTTCAGCAATGTCCGCTTCC...CCTGGGTCCAGGAGTGTAGAATATGCGGCTGCTTCCATTTGCTGAGTGTGTCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| CDS-3UTR TCA 90 bp | AAGGTGCAGGGGAGTCCTAGACCTGCTTCTCCCTGTGAAAACGGTGGAGGAAGCACCTGCTTCTCCCTGTaGAAACGGTGGAGGAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: KVQGSPRPASPCENGGGSTCFSL*KRWRKQ Trigger: CTGCTTCCTCCACCGTTTTCACAGGGAGAAGCAGGT...GCTTCCTCCACCGTTTTCACAGGGAGAAGCAGGTCTAGGACTCCCCTGCACCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| CDS-3UTR GCA 90 bp | TCGACACACTCAGCAAATGGAAGCAGCCGCATATTCTACACTCCTGGACCCAGGTGTCACCTGCCACTGTaGAAGACCCCAGGAGGGGAC | + |
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Preference number: 4 (lower is better) Translates to: STHSANGSSRIFYTPGPRCHLPL*KTPGGD Trigger: GTCCCCTCCTGGGGTCTTGCACAGTGGCAGGTGACA...CCTGGGTCCAGGAGTGTAGAATATGCGGCTGCTTCCATTTGCTGAGTGTGTCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| CDS-3UTR GCA 90 bp | GAAGCAGCCGCATATTCTACACTCCTGGACCCAGGGAGTGTGGGCCATTATGGTCGGTGGAGGAAGCAGTaGCAGGCTCCTGGAGAAATG | + |
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Preference number: 4 (lower is better) Translates to: EAAAYSTLLDPGSVGHYGRWRKQ*QAPGEM Trigger: CATTTCTCCAGGAGCCTGGCACTGCTTCCTCCACCG...ACCATAATGGCCCACACTCCCTGGGTCCAGGAGTGTAGAATATGCGGCTGCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| CDS-3UTR GCA 90 bp | AAACGGTGGAGGAAGCAGTGCCAGGCTCCTGGAGAAATGGAAGGGTGCAGGGAGTTATGGTGGCAAAGGTaGAGGGGAGTCCTAGACCTG | + |
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Preference number: 4 (lower is better) Translates to: KRWRKQCQAPGEMEGCRELWWQR*RGVLDL Trigger: CAGGTCTAGGACTCCCCTGCACCTTTGCCACCATAA...CTCCCTGCACCCTTCCATTTCTCCAGGAGCCTGGCACTGCTTCCTCCACCGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| CDS-3UTR CCA 90 bp | CCTGGACCCAGGGAGTGTGGGCCATTATGGTGGCAAAGGTGCAGGGGAGTCCTAACAGCCCACAGCTTCTaGCTTCAGTGTGTTACTCAC | + |
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Preference number: 4 (lower is better) Translates to: PGPRECGPLWWQRCRGVLTAHSF*LQCVTH Trigger: GTGAGTAACACACTGAAGCCAGAAGCTGTGGGCTGT...TAGGACTCCCCTGCACCTTTGCCACCATAATGGCCCACACTCCCTGGGTCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| CDS-3UTR CCA 90 bp | CAAATGGAAGCAGCCGCATATTCTACACTCCTGGACCCAGGGAGTGTGGGCCATCTCAACCCTGACGTCTaGCAAAGTCCAGGGTCCCTT | + |
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Preference number: 4 (lower is better) Translates to: QMEAAAYSTLLDPGSVGHLNPDV*QSPGSL Trigger: AAGGGACCCTGGACTTTGCCAGACGTCAGGGTTGAG...ATGGCCCACACTCCCTGGGTCCAGGAGTGTAGAATATGCGGCTGCTTCCATTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| CDS-3UTR CCA 90 bp | AAGTTTGAAAGCATCATTGAATCGACACACTCAGCAAATGGAAGCAGCCGCATACAGGGAGCCAGGGTGTaGGCTGGGTTCGGGGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: KFESIIESTHSANGSSRIQGARV*AGFGAV Trigger: GACAGCCCCGAACCCAGCCCACACCCTGGCTCCCTG...TATGCGGCTGCTTCCATTTGCTGAGTGTGTCGATTCAATGATGCTTTCAAACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| CDS-3UTR CCA 90 bp | AAGGTGCAGGGGAGTCCTAGACCTGCTTCTCCCTGTGAAAACGGTGGAGGAAGCGACACACTCAGCAAATaGAAGCAGCCGCATATTCTA | + |
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Preference number: 4 (lower is better) Translates to: KVQGSPRPASPCENGGGSDTLSK*KQPHIL Trigger: TAGAATATGCGGCTGCTTCCATTTGCTGAGTGTGTC...GCTTCCTCCACCGTTTTCACAGGGAGAAGCAGGTCTAGGACTCCCCTGCACCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| CDS-3UTR CCA 90 bp | ATTGAATCGACACACTCAGCAAATGGAAGCAGCCGCATATTCTACACTCCTGGAAAGTCCAGGGTCCCTTaGGTGGCGATGCAGCCACTT | + |
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Preference number: 4 (lower is better) Translates to: IESTHSANGSSRIFYTPGKSRVP*VAMQPL Trigger: AAGTGGCTGCATCGCCACCCAAGGGACCCTGGACTT...TCCAGGAGTGTAGAATATGCGGCTGCTTCCATTTGCTGAGTGTGTCGATTCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| CDS-3UTR TCA 90 bp | AAGTTTGAAAGCATCATTGAATCGACACACTCAGCAAATGGAAGCAGCCGCATACGTCAGGTTCACATGTaGCACATGAGGATCGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: KFESIIESTHSANGSSRIRQVHM*HMRIGH Trigger: GTGCCCGATCCTCATGTGTCACATGTGAACCTGACG...TATGCGGCTGCTTCCATTTGCTGAGTGTGTCGATTCAATGATGCTTTCAAACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| CDS-3UTR CCA 90 bp | AAGTTTGAAAGCATCATTGAATCGACACACTCAGCAAATGGAAGCAGCCGCATATGTGGGCCATTATGGTaGCAAAGGTGCAGGGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: KFESIIESTHSANGSSRICGPLW*QRCRGV Trigger: GACTCCCCTGCACCTTTGCCACCATAATGGCCCACA...TATGCGGCTGCTTCCATTTGCTGAGTGTGTCGATTCAATGATGCTTTCAAACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| CDS-3UTR GCA 90 bp | AAGTTTGAAAGCATCATTGAATCGACACACTCAGCAAATGGAAGCAGCCGCATATCTGAGCTTCGCTTCTaGTTTTCTTCTGCTCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: KFESIIESTHSANGSSRISELRF*FSSALC Trigger: GCAGAGAGCAGAAGAAAAGCAGAAGCGAAGCTCAGA...TATGCGGCTGCTTCCATTTGCTGAGTGTGTCGATTCAATGATGCTTTCAAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| CDS CCA 90 bp | TGCACGGGCAGCTTCGTGGGAGGACCTGAGGTGCCCATGGAGCTCTaGGGGCTGGAGGCTGTGGTCGTCCCGGCCGGGAACACGGACACC | + |
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Preference number: 5 (lower is better) Translates to: CTGSFVGGPEVPMEL*GLEAVVVPAGNTDT Trigger: GGTGTCCGTGTTCCCGGCCGGGACGACCACAGCCTCCAGCCCCCAGAGCTCCATGGGCACCTCAGGTCCTCCCACGAAGCTGCCCGTGCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| CDS CCA 90 bp | GCAGCTTCGTGGGAGGACCTGAGGTGCCCATGGAGCTCTGGGGGCTaGAGGCTGTGGTCGTCCCGGCCGGGAACACGGACACCTCAACCT | + |
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Preference number: 5 (lower is better) Translates to: AASWEDLRCPWSSGG*RLWSSRPGTRTPQP Trigger: AGGTTGAGGTGTCCGTGTTCCCGGCCGGGACGACCACAGCCTCCAGCCCCCAGAGCTCCATGGGCACCTCAGGTCCTCCCACGAAGCTGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| CDS CCA 90 bp | GCTCCTCTCAACCCTGACGTCTGGCAAAGTCCAGGGTCCCTTGGGTaGCGATGCAGCCACTTCCCCACAGCCCACAGCTTCTGGCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: APLNPDVWQSPGSLG*RCSHFPTAHSFWLQ Trigger: CTGAAGCCAGAAGCTGTGGGCTGTGGGGAAGTGGCTGCATCGCCACCCAAGGGACCCTGGACTTTGCCAGACGTCAGGGTTGAGAGGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| CDS-3UTR CAA 90 bp | CTCCTGGACCCAGGGAGTGTGGGCCATTATGGTGGCAAAGGTGCAGGGGAGTCCAGCAGGAAGCGGACATaGCTGAACAGGGAGCCAGGG | + |
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Preference number: 5 (lower is better) Translates to: LLDPGSVGHYGGKGAGESSRKRT*LNREPG Trigger: CCCTGGCTCCCTGTTCAGCAATGTCCGCTTCCTGCT...GGACTCCCCTGCACCTTTGCCACCATAATGGCCCACACTCCCTGGGTCCAGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| CDS TCA 90 bp | GTGGCTCAGAGGAAAATAGCCTGGGACAAGCAGGAGGAGCAGAGCTaGAGACCGCCACGAGGCCCAGGCCCTGGCAGTCATTCCTGTAAC | + |
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Preference number: 5 (lower is better) Translates to: VAQRKIAWDKQEEQS*RPPRGPGPGSHSCN Trigger: GTTACAGGAATGACTGCCAGGGCCTGGGCCTCGTGGCGGTCTTCAGCTCTGCTCCTCCTGCTTGTCCCAGGCTATTTTCCTCTGAGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| CDS-3UTR CAA 90 bp | CCTGGAGAAATGGAAGGGTGCAGGGAGGGCATCCGGGCACTCAGAGGTATTGCTTTGCAGCACAGGGCCTaGATGGACAGCAGATGCTAC | + |
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Preference number: 5 (lower is better) Translates to: PGEMEGCREGIRALRGIALQHRA*MDSRCY Trigger: GTAGCATCTGCTGTCCATCAAGGCCCTGTGCTGCAA...AGCAATACCTCTGAGTGCCCGGATGCCCTCCCTGCACCCTTCCATTTCTCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| CDS-3UTR CAA 90 bp | TGCCAGGCTCCTGGAGAAATGGAAGGGTGCAGGGAGGGCATCCGGGCACTCAGAAGTTTGAAAGCATCATaGAATCGACACACTCAGCAA | + |
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Preference number: 5 (lower is better) Translates to: CQAPGEMEGCREGIRALRSLKAS*NRHTQQ Trigger: TTGCTGAGTGTGTCGATTCAATGATGCTTTCAAACT...TCTGAGTGCCCGGATGCCCTCCCTGCACCCTTCCATTTCTCCAGGAGCCTGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| CDS CCA 72 bp | TGGGAGGACCTGAGGTGCCCATGGAGCTCTGGGGGCTaGAGGCTGTGGTCGTCCCGGCCGGGAACACGGACA | + |
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Preference number: 6 (lower is better) Translates to: WEDLRCPWSSGG*RLWSSRPGTRT Trigger: TGTCCGTGTTCCCGGCCGGGACGACCACAGCCTCCAGCCCCCAGAGCTCCATGGGCACCTCAGGTCCTCCCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| CDS CCA 72 bp | AGCTTCGTGGGAGGACCTGAGGTGCCCATGGAGCTCTaGGGGCTGGAGGCTGTGGTCGTCCCGGCCGGGAAC | + |
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Preference number: 6 (lower is better) Translates to: SFVGGPEVPMEL*GLEAVVVPAGN Trigger: GTTCCCGGCCGGGACGACCACAGCCTCCAGCCCCCAGAGCTCCATGGGCACCTCAGGTCCTCCCACGAAGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| CDS CCA 72 bp | CTGAGGTGCCCATGGAGCTCTGGGGGCTGGAGGCTGTaGTCGTCCCGGCCGGGAACACGGACACCTCAACCT | + |
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Preference number: 6 (lower is better) Translates to: LRCPWSSGGWRL*SSRPGTRTPQP Trigger: AGGTTGAGGTGTCCGTGTTCCCGGCCGGGACGACCACAGCCTCCAGCCCCCAGAGCTCCATGGGCACCTCAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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| CDS CCA 72 bp | GTGGGCTGGGTTCGGGGCTGTCCTTTCTGGTCACGCTaGGCCAGGTGTGCACGGGCAGCTTCGTGGGAGGAC | + |
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Preference number: 6 (lower is better) Translates to: VGWVRGCPFWSR*ARCARAASWED Trigger: GTCCTCCCACGAAGCTGCCCGTGCACACCTGGCCCAGCGTGACCAGAAAGGACAGCCCCGAACCCAGCCCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330793.2 |
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