Pregenerated sensors for CCZ1 (Homo sapiens)

Ensembl gene IDs: ENSG00000122674

Ensembl transcript IDs: ENST00000325974.9, ENST00000474507.1, ENST00000628813.2

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR-3UTR CCA 90 bp	GGCTGCAGTGAGCCATTGCATTCCAGCCTGGGTCACGGAGCTGGTGGCCAGTGTGGTTTCCTACATGGCTaGATTACGGGAGTTCGAGAC	+
Preference number: 2 (lower is better) Translates to: GCSEPLHSSLGHGAGGQCGFLHG*ITGVRD Trigger: GTCTCGAACTCCCGTAATCCAGCCATGTAGGAAACC...ACACTGGCCACCAGCTCCGTGACCCAGGCTGGAATGCAATGGCTCACTGCAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000325974.9 ENST00000628813.2
3UTR-3UTR TCA 90 bp	GGCTGCAGTGAGCCATTGCATTCCAGCCTGGGTCACGGAGCTGGTGGCCAGTGTCTAATCCACTCCAGATaGGCTGATCGTTATAGAGAA	+
Preference number: 2 (lower is better) Translates to: GCSEPLHSSLGHGAGGQCLIHSR*ADRYRE Trigger: TTCTCTATAACGATCAGCTCATCTGGAGTGGATTAG...ACACTGGCCACCAGCTCCGTGACCCAGGCTGGAATGCAATGGCTCACTGCAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628813.2
CDS-3UTR TCA 90 bp	TGCAGTGAGCCATTGCATTCCAGCCTGGGTCACGGAGCTGGTGGCCAGTGTAATCTAATCCACTCCAGATaGGCTGATCGTTATAGAGAA	+
Preference number: 4 (lower is better) Translates to: CSEPLHSSLGHGAGGQCNLIHSR*ADRYRE Trigger: TTCTCTATAACGATCAGCTCATCTGGAGTGGATTAG...ATTACACTGGCCACCAGCTCCGTGACCCAGGCTGGAATGCAATGGCTCACTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000325974.9 ENST00000628813.2
CDS-3UTR TCA 90 bp	TGCAGTGAGCCATTGCATTCCAGCCTGGGTCACGGAGCTGGTGGCCAGTGTAATGATTCCGAACAACCATaGCCATCCAGAAATTTTCTT	+
Preference number: 4 (lower is better) Translates to: CSEPLHSSLGHGAGGQCNDSEQP*PSRNFL Trigger: AAGAAAATTTCTGGATGGTCATGGTTGTTCGGAATC...ATTACACTGGCCACCAGCTCCGTGACCCAGGCTGGAATGCAATGGCTCACTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325974.9
CDS CCA 72 bp	AGAGAGGTACCACTGCTGTCTCCAGCTCGCAGTCGGTaGGACACAGAAAGATGCCCACACTCTACTGCTGAC	+
Preference number: 6 (lower is better) Translates to: REVPLLSPARSR*DTERCPHSTAD Trigger: GTCAGCAGTAGAGTGTGGGCATCTTTCTGTGTCCCACCGACTGCGAGCTGGAGACAGCAGTGGTACCTCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000474507.1
CDS TCA 72 bp	CAACTAGAGCCATCTGGACACAGACTGCCCATTCCATaGTGCGAGGGGAGTGCTGTTGACCTTGTCAGGTGT	+
Preference number: 6 (lower is better) Translates to: QLEPSGHRLPIP*CEGSAVDLVRC Trigger: ACACCTGACAAGGTCAACAGCACTCCCCTCGCATCATGGAATGGGCAGTCTGTGTCCAGATGGCTCTAGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000474507.1
CDS TCA 72 bp	GTCCTCATCAGAGAGGCACAGGGAAGTGTTCGTGACTaGCGTGATGACTTAAAATGCTCTTGCAAACCCGAC	+
Preference number: 6 (lower is better) Translates to: VLIREAQGSVRD*RDDLKCSCKPD Trigger: GTCGGGTTTGCAAGAGCATTTTAAGTCATCACGTCAGTCACGAACACTTCCCTGTGCCTCTCTGATGAGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000474507.1
CDS TCA 72 bp	CTGTCTCAAGAGAAGAAAGATCTCAAATCAGTGACCTaGCCTTTCGTCTTAAGATCCTGGACAACAGGAGTC	+
Preference number: 6 (lower is better) Translates to: LSQEKKDLKSVT*PFVLRSWTTGV Trigger: GACTCCTGTTGTCCAGGATCTTAAGACGAAAGGTCAGGTCACTGATTTGAGATCTTTCTTCTCTTGAGACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000474507.1
CDS CAA 72 bp	ACATGGAGAAGCAACGAAGACCAGAATCTTATTCACTaGTGTGATGGGGACTTAGGGGTTCACTGTTCTAGT	+
Preference number: 6 (lower is better) Translates to: TWRSNEDQNLIH*CDGDLGVHCSS Trigger: ACTAGAACAGTGAACCCCTAAGTCCCCATCACACAAGTGAATAAGATTCTGGTCTTCGTTGCTTCTCCATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000474507.1

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