Pregenerated sensors for CCL7 (Homo sapiens)
Ensembl gene IDs: ENSG00000108688Ensembl transcript IDs: ENST00000378569.2, ENST00000394627.5, ENST00000394630.3
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | AGTTTTTACAGCACTGAGATGACATATACATCCAAGGCTTTATGTTCAAAACCCGTTTTCTTGTCCAGGTaGTTCATAAAGTCCTGGACC | + |
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Preference number: 2 (lower is better) Translates to: SFYSTEMTYTSKALCSKPVFLSR*FIKSWT Trigger: GGTCCAGGACTTTATGAAGCACCTGGACAAGAAAAC...GGGTTTTGAACATAAAGCCTTGGATGTATATGTCATCTCAGTGCTGTAAAAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000394627.5 |
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| 3UTR-3UTR CCA 90 bp | AGTTTTTACAGCACTGAGATGACATATACATCCAAGGCTTTATGTTCAAAACCCTTGTTTCTCAAGTCATaGCTTGTTTTCAGTTCAGTC | + |
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Preference number: 2 (lower is better) Translates to: SFYSTEMTYTSKALCSKPLFLKS*LVFSSV Trigger: GACTGAACTGAAAACAAGCCATGACTTGAGAAACAA...GGGTTTTGAACATAAAGCCTTGGATGTATATGTCATCTCAGTGCTGTAAAAACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000378569.2 ENST00000394627.5 ENST00000394630.3 |
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| 3UTR TCA 72 bp | AGGGAGGAGCATCCCACAGTTTTTACAGCACTGAGATaGCATATACATCCAAGGCTTTATGTTCAAAACCCA | + |
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Preference number: 3 (lower is better) Translates to: REEHPTVFTALR*HIHPRLYVQNP Trigger: TGGGTTTTGAACATAAAGCCTTGGATGTATATGTCATCTCAGTGCTGTAAAAACTGTGGGATGCTCCTCCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000378569.2 ENST00000394627.5 ENST00000394630.3 |
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| 3UTR TCA 72 bp | AGAGAAGGGAGGAGCATCCCACAGTTTTTACAGCACTaGGATGACATATACATCCAAGGCTTTATGTTCAAA | + |
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Preference number: 3 (lower is better) Translates to: REGRSIPQFLQH*DDIYIQGFMFK Trigger: TTTGAACATAAAGCCTTGGATGTATATGTCATCTCAGTGCTGTAAAAACTGTGGGATGCTCCTCCCTTCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000378569.2 ENST00000394630.3 |
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| CDS-3UTR TCA 90 bp | AAGTCATGGCTTGTTTTCAGTTCAGTCATGAATGTTCAAAGCTTTGGAGTTTGGGGTCTTGAAGCTGGCTaGGCAAGCCCCTGGGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: KSWLVFSSVMNVQSFGVWGLEAG*ASPWGL Trigger: CAGCCCCCAGGGGCTTGCTCAGCCAGCTTCAAGACC...CCAAACTCCAAAGCTTTGAACATTCATGACTGAACTGAAAACAAGCCATGACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000394630.3 |
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| CDS-3UTR TCA 90 bp | AAGTCATGGCTTGTTTTCAGTTCAGTCATGAATGTTCAAAGCTTTGGAGTTTGGCTGGGTCTTTCTGGCTaGGCAAGCCCCTGGGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: KSWLVFSSVMNVQSFGVWLGLSG*ASPWGL Trigger: CAGCCCCCAGGGGCTTGCTCAGCCAGAAAGACCCAG...CCAAACTCCAAAGCTTTGAACATTCATGACTGAACTGAAAACAAGCCATGACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000394627.5 |
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| CDS-3UTR CCA 90 bp | AAGTCATGGCTTGTTTTCAGTTCAGTCATGAATGTTCAAAGCTTTGGAGTTTGGGCTTCCCGGGGACAGTaGCTACTGGTGGTCCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: KSWLVFSSVMNVQSFGVWASRGQ*LLVVLL Trigger: CAGAAGGACCACCAGTAGCCACTGTCCCCGGGAAGC...CCAAACTCCAAAGCTTTGAACATTCATGACTGAACTGAAAACAAGCCATGACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394627.5 |
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| CDS-3UTR CCA 90 bp | CTCAAGTCATGGCTTGTTTTCAGTTCAGTCATGAATGTTCAAAGCTTTGGAGTTTGTCCTGGGTCTTTCTaGCTGAGCAAGCCCCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LKSWLVFSSVMNVQSFGVCPGSF*LSKPLG Trigger: CCCCAGGGGCTTGCTCAGCCAGAAAGACCCAGGACA...AACTCCAAAGCTTTGAACATTCATGACTGAACTGAAAACAAGCCATGACTTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394627.5 |
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| CDS-3UTR TCA 90 bp | AGTTTTTACAGCACTGAGATGACATATACATCCAAGGCTTTATGTTCAAAACCCTTAATCCCAACTGGCTaGGCAAGCCCCTGGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SFYSTEMTYTSKALCSKPLIPTG*ASPWGL Trigger: CAGCCCCCAGGGGCTTGCTCAGCCAGTTGGGATTAA...GGGTTTTGAACATAAAGCCTTGGATGTATATGTCATCTCAGTGCTGTAAAAACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000378569.2 |
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| CDS-3UTR GCA 90 bp | CAAGTCATGGCTTGTTTTCAGTTCAGTCATGAATGTTCAAAGCTTTGGAGTTTGGGGGCTGAAAGCAGCTaGTGTGAGCAGCAGACACAG | + |
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Preference number: 4 (lower is better) Translates to: QVMACFQFSHECSKLWSLGAESS*CEQQTQ Trigger: CTGTGTCTGCTGCTCACAGCAGCTGCTTTCAGCCCC...CAAACTCCAAAGCTTTGAACATTCATGACTGAACTGAAAACAAGCCATGACTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000394627.5 ENST00000394630.3 |
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| CDS-3UTR CCA 90 bp | AGTTTTTACAGCACTGAGATGACATATACATCCAAGGCTTTATGTTCAAAACCCGCTTCCCGGGGACAGTaGCTACTGGTGGTCCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SFYSTEMTYTSKALCSKPASRGQ*LLVVLL Trigger: CAGAAGGACCACCAGTAGCCACTGTCCCCGGGAAGC...GGGTTTTGAACATAAAGCCTTGGATGTATATGTCATCTCAGTGCTGTAAAAACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000378569.2 ENST00000394627.5 |
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| CDS-3UTR GCA 90 bp | AGTTTTTACAGCACTGAGATGACATATACATCCAAGGCTTTATGTTCAAAACCCGGGGCTGAAAGCAGCTaGTGTGAGCAGCAGACACAG | + |
|
Preference number: 4 (lower is better) Translates to: SFYSTEMTYTSKALCSKPGAESS*CEQQTQ Trigger: CTGTGTCTGCTGCTCACAGCAGCTGCTTTCAGCCCC...GGGTTTTGAACATAAAGCCTTGGATGTATATGTCATCTCAGTGCTGTAAAAACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000378569.2 ENST00000394627.5 ENST00000394630.3 |
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| CDS-3UTR CCA 90 bp | AAGTCATGGCTTGTTTTCAGTTCAGTCATGAATGTTCAAAGCTTTGGAGTTTGGGGGGACAGTGGCTACTaGTGGTCCTTCTGTAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: KSWLVFSSVMNVQSFGVWGDSGY*WSFCSS Trigger: AGAGCTACAGAAGGACCACCAGTAGCCACTGTCCCC...CCAAACTCCAAAGCTTTGAACATTCATGACTGAACTGAAAACAAGCCATGACTT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000394627.5 |
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| CDS-3UTR TCA 90 bp | AAGTCATGGCTTGTTTTCAGTTCAGTCATGAATGTTCAAAGCTTTGGAGTTTGGTTTCATGTTGGAGGGTaGGGGCATGGGCTTCCACAT | + |
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Preference number: 4 (lower is better) Translates to: KSWLVFSSVMNVQSFGVWFHVGG*GHGLPH Trigger: ATGTGGAAGCCCATGCCCTCACCCTCCAACATGAAA...CCAAACTCCAAAGCTTTGAACATTCATGACTGAACTGAAAACAAGCCATGACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000394627.5 ENST00000394630.3 |
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| CDS-3UTR CCA 90 bp | AGTTTTTACAGCACTGAGATGACATATACATCCAAGGCTTTATGTTCAAAACCCGGGGACAGTGGCTACTaGTGGTCCTTCTGTAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SFYSTEMTYTSKALCSKPGDSGY*WSFCSS Trigger: AGAGCTACAGAAGGACCACCAGTAGCCACTGTCCCC...GGGTTTTGAACATAAAGCCTTGGATGTATATGTCATCTCAGTGCTGTAAAAACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000378569.2 ENST00000394627.5 |
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| CDS-3UTR TCA 90 bp | CAAGTCATGGCTTGTTTTCAGTTCAGTCATGAATGTTCAAAGCTTTGGAGTTTGGCATGGGCTTCCACATaGGAATTGGAGGTTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QVMACFQFSHECSKLWSLAWAST*ELEVSG Trigger: ACCAGAAACCTCCAATTCTCATGTGGAAGCCCATGC...CAAACTCCAAAGCTTTGAACATTCATGACTGAACTGAAAACAAGCCATGACTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394627.5 ENST00000394630.3 |
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| CDS-3UTR TCA 90 bp | AGTTTTTACAGCACTGAGATGACATATACATCCAAGGCTTTATGTTCAAAACCCTTTCATGTTGGAGGGTaGGGGCATGGGCTTCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: SFYSTEMTYTSKALCSKPFHVGG*GHGLPH Trigger: ATGTGGAAGCCCATGCCCTCACCCTCCAACATGAAA...GGGTTTTGAACATAAAGCCTTGGATGTATATGTCATCTCAGTGCTGTAAAAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000378569.2 ENST00000394627.5 ENST00000394630.3 |
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| CDS-3UTR TCA 90 bp | CAAGTCATGGCTTGTTTTCAGTTCAGTCATGAATGTTCAAAGCTTTGGAGTTTGTGTCCAGTTTGGTCTTaGAGATTACAGCTTCCCGGG | + |
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Preference number: 4 (lower is better) Translates to: QVMACFQFSHECSKLWSLCPVWS*RLQLPG Trigger: CCCGGGAAGCTGTAATCTTCAAGACCAAACTGGACA...CAAACTCCAAAGCTTTGAACATTCATGACTGAACTGAAAACAAGCCATGACTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394627.5 |
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| CDS-3UTR CCA 90 bp | AGTTTTTACAGCACTGAGATGACATATACATCCAAGGCTTTATGTTCAAAACCCAGTATTAATCCCAACTaGCTGAGCAAGCCCCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SFYSTEMTYTSKALCSKPSINPN*LSKPLG Trigger: CCCCAGGGGCTTGCTCAGCCAGTTGGGATTAATACT...GGGTTTTGAACATAAAGCCTTGGATGTATATGTCATCTCAGTGCTGTAAAAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000378569.2 |
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| CDS-3UTR CCA 90 bp | AGTTTTTACAGCACTGAGATGACATATACATCCAAGGCTTTATGTTCAAAACCCGACAGTGGCTACTGGTaGTCCTTCTGTAGCTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: SFYSTEMTYTSKALCSKPDSGYW*SFCSSP Trigger: TGGAGAGCTACAGAAGGACCACCAGTAGCCACTGTC...GGGTTTTGAACATAAAGCCTTGGATGTATATGTCATCTCAGTGCTGTAAAAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000378569.2 ENST00000394627.5 |
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| CDS-3UTR CCA 90 bp | CAAGTCATGGCTTGTTTTCAGTTCAGTCATGAATGTTCAAAGCTTTGGAGTTTGATTGAGGGTGTGTCCTaGGTCTTTCTGGCTGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QVMACFQFSHECSKLWSLIEGVS*VFLAEQ Trigger: TTGCTCAGCCAGAAAGACCCAGGACACACCCTCAAT...CAAACTCCAAAGCTTTGAACATTCATGACTGAACTGAAAACAAGCCATGACTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394627.5 |
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| CDS-3UTR TCA 90 bp | AGTTTTTACAGCACTGAGATGACATATACATCCAAGGCTTTATGTTCAAAACCCGCATGGGCTTCCACATaGGAATTGGAGGTTTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: SFYSTEMTYTSKALCSKPAWAST*ELEVSG Trigger: ACCAGAAACCTCCAATTCTCATGTGGAAGCCCATGC...GGGTTTTGAACATAAAGCCTTGGATGTATATGTCATCTCAGTGCTGTAAAAACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000378569.2 ENST00000394627.5 ENST00000394630.3 |
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| CDS-3UTR TCA 90 bp | AGTTTTTACAGCACTGAGATGACATATACATCCAAGGCTTTATGTTCAAAACCCTGTCCAGTTTGGTCTTaGAGATTACAGCTTCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SFYSTEMTYTSKALCSKPCPVWS*RLQLPG Trigger: CCCGGGAAGCTGTAATCTTCAAGACCAAACTGGACA...GGGTTTTGAACATAAAGCCTTGGATGTATATGTCATCTCAGTGCTGTAAAAACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000378569.2 ENST00000394627.5 |
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| CDS-3UTR TCA 90 bp | AGTTTTTACAGCACTGAGATGACATATACATCCAAGGCTTTATGTTCAAAACCCTATACAATACCCCCATaGGGTAGAGAAGGGAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: SFYSTEMTYTSKALCSKPYTIPP*GREGRS Trigger: GCTCCTCCCTTCTCTACCTCATGGGGGTATTGTATA...GGGTTTTGAACATAAAGCCTTGGATGTATATGTCATCTCAGTGCTGTAAAAACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000378569.2 ENST00000394630.3 |
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| CDS-3UTR GCA 90 bp | AAGTCATGGCTTGTTTTCAGTTCAGTCATGAATGTTCAAAGCTTTGGAGTTTGGCAGCAGACACAGAAGTaGTGCAGAGGCTTTCATGTT | + |
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Preference number: 4 (lower is better) Translates to: KSWLVFSSVMNVQSFGVWQQTQK*CRGFHV Trigger: AACATGAAAGCCTCTGCAGCACTTCTGTGTCTGCTG...CCAAACTCCAAAGCTTTGAACATTCATGACTGAACTGAAAACAAGCCATGACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394627.5 ENST00000394630.3 |
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| CDS-3UTR TCA 90 bp | AAGTCATGGCTTGTTTTCAGTTCAGTCATGAATGTTCAAAGCTTTGGAGTTTGGGTAGCAGCAGGTAGTTaGAGTATTAATCCCAACTGC | + |
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Preference number: 4 (lower is better) Translates to: KSWLVFSSVMNVQSFGVWVAAGS*SINPNC Trigger: GCAGTTGGGATTAATACTTCAACTACCTGCTGCTAC...CCAAACTCCAAAGCTTTGAACATTCATGACTGAACTGAAAACAAGCCATGACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394627.5 |
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| CDS-3UTR GCA 90 bp | AGTTTTTACAGCACTGAGATGACATATACATCCAAGGCTTTATGTTCAAAACCCCAGCAGACACAGAAGTaGTGCAGAGGCTTTCATGTT | + |
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Preference number: 4 (lower is better) Translates to: SFYSTEMTYTSKALCSKPQQTQK*CRGFHV Trigger: AACATGAAAGCCTCTGCAGCACTTCTGTGTCTGCTG...GGGTTTTGAACATAAAGCCTTGGATGTATATGTCATCTCAGTGCTGTAAAAACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000378569.2 ENST00000394627.5 ENST00000394630.3 |
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| CDS-3UTR TCA 90 bp | AGTTTTTACAGCACTGAGATGACATATACATCCAAGGCTTTATGTTCAAAACCCGTAGCAGCAGGTAGTTaGAGTATTAATCCCAACTGG | + |
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Preference number: 4 (lower is better) Translates to: SFYSTEMTYTSKALCSKPVAAGS*SINPNW Trigger: CCAGTTGGGATTAATACTTCAACTACCTGCTGCTAC...GGGTTTTGAACATAAAGCCTTGGATGTATATGTCATCTCAGTGCTGTAAAAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378569.2 |
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| CDS-3UTR CCA 90 bp | CTCAAGTCATGGCTTGTTTTCAGTTCAGTCATGAATGTTCAAAGCTTTGGAGTTCTTCCACATGAGAATTaGAGGTTTCTGGTTTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: LKSWLVFSSVMNVQSFGVLPHEN*RFLVWS Trigger: AGACCAAACCAGAAACCTCCAATTCTCATGTGGAAG...AACTCCAAAGCTTTGAACATTCATGACTGAACTGAAAACAAGCCATGACTTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394627.5 ENST00000394630.3 |
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| CDS-3UTR CCA 90 bp | AAGTCATGGCTTGTTTTCAGTTCAGTCATGAATGTTCAAAGCTTTGGAGTTTGGCTTCCACATGAGAATTaGAGGTTTCTGGTTTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: KSWLVFSSVMNVQSFGVWLPHEN*RFLVWS Trigger: AGACCAAACCAGAAACCTCCAATTCTCATGTGGAAG...CCAAACTCCAAAGCTTTGAACATTCATGACTGAACTGAAAACAAGCCATGACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394627.5 ENST00000394630.3 |
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| CDS-3UTR TCA 90 bp | CAAGTCATGGCTTGTTTTCAGTTCAGTCATGAATGTTCAAAGCTTTGGAGTTTGTTTACAGCACTGAGATaGCATATACATCCAAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: QVMACFQFSHECSKLWSLFTALR*HIHPRL Trigger: AAGCCTTGGATGTATATGTCATCTCAGTGCTGTAAA...CAAACTCCAAAGCTTTGAACATTCATGACTGAACTGAAAACAAGCCATGACTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394627.5 ENST00000394630.3 |
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| CDS-3UTR CCA 90 bp | AGTTTTTACAGCACTGAGATGACATATACATCCAAGGCTTTATGTTCAAAACCCCTTCCACATGAGAATTaGAGGTTTCTGGTTTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: SFYSTEMTYTSKALCSKPLPHEN*RFLVWS Trigger: AGACCAAACCAGAAACCTCCAATTCTCATGTGGAAG...GGGTTTTGAACATAAAGCCTTGGATGTATATGTCATCTCAGTGCTGTAAAAACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000378569.2 ENST00000394627.5 ENST00000394630.3 |
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| CDS-3UTR TCA 90 bp | AGTTTTTACAGCACTGAGATGACATATACATCCAAGGCTTTATGTTCAAAACCCTTTACAGCACTGAGATaGCATATACATCCAAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: SFYSTEMTYTSKALCSKPFTALR*HIHPRL Trigger: AAGCCTTGGATGTATATGTCATCTCAGTGCTGTAAA...GGGTTTTGAACATAAAGCCTTGGATGTATATGTCATCTCAGTGCTGTAAAAACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000378569.2 ENST00000394627.5 ENST00000394630.3 |
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| CDS-3UTR TCA 90 bp | CAAGTCATGGCTTGTTTTCAGTTCAGTCATGAATGTTCAAAGCTTTGGAGTTTGCAGTTTTTACAGCACTaGGATGACATATACATCCAA | + |
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Preference number: 4 (lower is better) Translates to: QVMACFQFSHECSKLWSLQFLQH*DDIYIQ Trigger: TTGGATGTATATGTCATCTCAGTGCTGTAAAAACTG...CAAACTCCAAAGCTTTGAACATTCATGACTGAACTGAAAACAAGCCATGACTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000394627.5 ENST00000394630.3 |
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| CDS-3UTR GCA 90 bp | AAGTCATGGCTTGTTTTCAGTTCAGTCATGAATGTTCAAAGCTTTGGAGTTTGGCTTTGCACTGATTCTTaGAAGGACTTATACAATACC | + |
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Preference number: 4 (lower is better) Translates to: KSWLVFSSVMNVQSFGVWLCTDS*KDLYNT Trigger: GGTATTGTATAAGTCCTTGCAAGAATCAGTGCAAAG...CCAAACTCCAAAGCTTTGAACATTCATGACTGAACTGAAAACAAGCCATGACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394630.3 |
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| CDS-3UTR CCA 90 bp | AAGTCATGGCTTGTTTTCAGTTCAGTCATGAATGTTCAAAGCTTTGGAGTTTGGTTGTTTCTCAAGTCATaGCTTGTTTTCAGTTCAGTC | + |
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Preference number: 4 (lower is better) Translates to: KSWLVFSSVMNVQSFGVWLFLKS*LVFSSV Trigger: GACTGAACTGAAAACAAGCCATGACTTGAGAAACAA...CCAAACTCCAAAGCTTTGAACATTCATGACTGAACTGAAAACAAGCCATGACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000394627.5 ENST00000394630.3 |
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| CDS-3UTR CCA 90 bp | CAAGTCATGGCTTGTTTTCAGTTCAGTCATGAATGTTCAAAGCTTTGGAGTTTGTTGTTTCTCAAGTCATaGCTTGTTTTCAGTTCAGTC | + |
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Preference number: 4 (lower is better) Translates to: QVMACFQFSHECSKLWSLLFLKS*LVFSSV Trigger: GACTGAACTGAAAACAAGCCATGACTTGAGAAACAA...CAAACTCCAAAGCTTTGAACATTCATGACTGAACTGAAAACAAGCCATGACTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000394627.5 ENST00000394630.3 |
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| CDS-3UTR TCA 90 bp | AGTTTTTACAGCACTGAGATGACATATACATCCAAGGCTTTATGTTCAAAACCCCAGTTTTTACAGCACTaGGATGACATATACATCCAA | + |
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Preference number: 4 (lower is better) Translates to: SFYSTEMTYTSKALCSKPQFLQH*DDIYIQ Trigger: TTGGATGTATATGTCATCTCAGTGCTGTAAAAACTG...GGGTTTTGAACATAAAGCCTTGGATGTATATGTCATCTCAGTGCTGTAAAAACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENST00000378569.2 ENST00000394627.5 ENST00000394630.3 |
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| CDS-3UTR GCA 90 bp | AGTTTTTACAGCACTGAGATGACATATACATCCAAGGCTTTATGTTCAAAACCCCTTTGCACTGATTCTTaGAAGGACTTATACAATACC | + |
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Preference number: 4 (lower is better) Translates to: SFYSTEMTYTSKALCSKPLCTDS*KDLYNT Trigger: GGTATTGTATAAGTCCTTGCAAGAATCAGTGCAAAG...GGGTTTTGAACATAAAGCCTTGGATGTATATGTCATCTCAGTGCTGTAAAAACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000378569.2 ENST00000394630.3 |
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| CDS-3UTR GCA 90 bp | AAGTCATGGCTTGTTTTCAGTTCAGTCATGAATGTTCAAAGCTTTGGAGTTTGGATTAAAGCAAATCTTTaGACTGATTCTTGCAAGGAC | + |
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Preference number: 4 (lower is better) Translates to: KSWLVFSSVMNVQSFGVWIKANL*TDSCKD Trigger: GTCCTTGCAAGAATCAGTGCAAAGATTTGCTTTAAT...CCAAACTCCAAAGCTTTGAACATTCATGACTGAACTGAAAACAAGCCATGACTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394630.3 |
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| CDS-3UTR GCA 90 bp | AGTTTTTACAGCACTGAGATGACATATACATCCAAGGCTTTATGTTCAAAACCCATTAAAGCAAATCTTTaGACTGATTCTTGCAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SFYSTEMTYTSKALCSKPIKANL*TDSCKD Trigger: GTCCTTGCAAGAATCAGTGCAAAGATTTGCTTTAAT...GGGTTTTGAACATAAAGCCTTGGATGTATATGTCATCTCAGTGCTGTAAAAACT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000378569.2 ENST00000394630.3 |
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| CDS-3UTR CAA 90 bp | AGTTTTTACAGCACTGAGATGACATATACATCCAAGGCTTTATGTTCAAAACCCTTGTCCAGTTTGGTCTaGAAGCTGGCTGAGCAAGCC | + |
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Preference number: 5 (lower is better) Translates to: SFYSTEMTYTSKALCSKPLSSLV*KLAEQA Trigger: GGCTTGCTCAGCCAGCTTCAAGACCAAACTGGACAA...GGGTTTTGAACATAAAGCCTTGGATGTATATGTCATCTCAGTGCTGTAAAAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394630.3 |
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| CDS-3UTR CAA 90 bp | AAGTCATGGCTTGTTTTCAGTTCAGTCATGAATGTTCAAAGCTTTGGAGTTTGGTTGTCCAGTTTGGTCTaGAAGATTACAGCTTCCCGG | + |
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Preference number: 5 (lower is better) Translates to: KSWLVFSSVMNVQSFGVWLSSLV*KITASR Trigger: CCGGGAAGCTGTAATCTTCAAGACCAAACTGGACAA...CCAAACTCCAAAGCTTTGAACATTCATGACTGAACTGAAAACAAGCCATGACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394627.5 |
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| CDS-3UTR CAA 90 bp | CTCAAGTCATGGCTTGTTTTCAGTTCAGTCATGAATGTTCAAAGCTTTGGAGTTAAGAAGAAAAGTCCATaGAGGGTGTGTCCTGGGTCT | + |
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Preference number: 5 (lower is better) Translates to: LKSWLVFSSVMNVQSFGVKKKSP*RVCPGS Trigger: AGACCCAGGACACACCCTCAATGGACTTTTCTTCTT...AACTCCAAAGCTTTGAACATTCATGACTGAACTGAAAACAAGCCATGACTTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394627.5 |
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| CDS-3UTR CAA 90 bp | AGTTTTTACAGCACTGAGATGACATATACATCCAAGGCTTTATGTTCAAAACCCTTGTCCAGTTTGGTCTaGAAGATTACAGCTTCCCGG | + |
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Preference number: 5 (lower is better) Translates to: SFYSTEMTYTSKALCSKPLSSLV*KITASR Trigger: CCGGGAAGCTGTAATCTTCAAGACCAAACTGGACAA...GGGTTTTGAACATAAAGCCTTGGATGTATATGTCATCTCAGTGCTGTAAAAACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000378569.2 ENST00000394627.5 |
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| CDS-3UTR CAA 90 bp | AAGTCATGGCTTGTTTTCAGTTCAGTCATGAATGTTCAAAGCTTTGGAGTTTGGATCTCCTTGTCCAGTTaGGTCTTGAAGATTACAGCT | + |
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Preference number: 5 (lower is better) Translates to: KSWLVFSSVMNVQSFGVWISLSS*VLKITA Trigger: AGCTGTAATCTTCAAGACCAAACTGGACAAGGAGAT...CCAAACTCCAAAGCTTTGAACATTCATGACTGAACTGAAAACAAGCCATGACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394627.5 |
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| CDS-3UTR CAA 90 bp | AGTTTTTACAGCACTGAGATGACATATACATCCAAGGCTTTATGTTCAAAACCCATCTCCTTGTCCAGTTaGGTCTTGAAGATTACAGCT | + |
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Preference number: 5 (lower is better) Translates to: SFYSTEMTYTSKALCSKPISLSS*VLKITA Trigger: AGCTGTAATCTTCAAGACCAAACTGGACAAGGAGAT...GGGTTTTGAACATAAAGCCTTGGATGTATATGTCATCTCAGTGCTGTAAAAACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000378569.2 ENST00000394627.5 |
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| CDS TCA 72 bp | GATTTTCTTATTGATAAATCTGTAGCAGCAGGTAGTTaGAGTATTAATCCCAACTGGCTGAGCAAGCCCCTG | + |
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Preference number: 6 (lower is better) Translates to: DFLIDKSVAAGS*SINPNWLSKPL Trigger: CAGGGGCTTGCTCAGCCAGTTGGGATTAATACTTCAACTACCTGCTGCTACAGATTTATCAATAAGAAAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378569.2 |
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