RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CCL24 (Homo sapiens)

Ensembl gene IDs: ENSG00000106178

Ensembl transcript IDs: ENST00000222902.7, ENST00000416943.1

Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGATCTTCTCACCCAGCTCCAGAAAGGCAAGGGGCCTTGGATGCTTaGAGCCATTGCTCAGCCCCCGGGAACCACATCACCTGCTCCCTC +
Preference number: 1 (lower is better)
Translates to: GSSHPAPERQGALDA*SHCSAPGNHITCSL
Trigger: GAGGGAGCAGGTGATGTGGTTCCCGGGGGCTGAGCAATGGCTCCAAGCATCCAAGGCCCCTTGCCTTTCTGGAGCTGGGTGAGAAGATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222902.7
3UTR GCA 90 bp TCTGGGATCTTCTCACCCAGCTCCAGAAAGGCAAGGGGCCTTGGATaGTTGGAGCCATTGCTCAGCCCCCGGGAACCACATCACCTGCTC +
Preference number: 1 (lower is better)
Translates to: SGIFSPSSRKARGLG*LEPLLSPREPHHLL
Trigger: GAGCAGGTGATGTGGTTCCCGGGGGCTGAGCAATGGCTCCAAGCATCCAAGGCCCCTTGCCTTTCTGGAGCTGGGTGAGAAGATCCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222902.7
3UTR CCA 90 bp TCCTTCTGGGATCTTCTCACCCAGCTCCAGAAAGGCAAGGGGCCTTaGATGCTTGGAGCCATTGCTCAGCCCCCGGGAACCACATCACCT +
Preference number: 1 (lower is better)
Translates to: SFWDLLTQLQKGKGP*MLGAIAQPPGTTSP
Trigger: AGGTGATGTGGTTCCCGGGGGCTGAGCAATGGCTCCAAGCATCCAAGGCCCCTTGCCTTTCTGGAGCTGGGTGAGAAGATCCCAGAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222902.7
3UTR CCA 90 bp ACCAGGTCAGGAGGAGAAGGCAAAGAGTTGCCACTGCTCTCCTTCTaGGATCTTCTCACCCAGCTCCAGAAAGGCAAGGGGCCTTGGATG +
Preference number: 1 (lower is better)
Translates to: TRSGGEGKELPLLSF*DLLTQLQKGKGPWM
Trigger: CATCCAAGGCCCCTTGCCTTTCTGGAGCTGGGTGAGAAGATCCCAGAAGGAGAGCAGTGGCAACTCTTTGCCTTCTCCTCCTGACCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222902.7
3UTR GCA 90 bp TTGGATGCTTGGAGCCATTGCTCAGCCCCCGGGAACCACATCACCTaGTCCCTCGGGTTTTTCATAGAAGAGACACATCCCTGGAGAGTG +
Preference number: 1 (lower is better)
Translates to: LDAWSHCSAPGNHIT*SLGFFIEETHPWRV
Trigger: CACTCTCCAGGGATGTGTCTCTTCTATGAAAAACCCGAGGGAGCAGGTGATGTGGTTCCCGGGGGCTGAGCAATGGCTCCAAGCATCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000222902.7
3UTR CAA 90 bp GGGATCTTCTCACCCAGCTCCAGAAAGGCAAGGGGCCTTGGATGCTaGGAGCCATTGCTCAGCCCCCGGGAACCACATCACCTGCTCCCT +
Preference number: 2 (lower is better)
Translates to: GIFSPSSRKARGLGC*EPLLSPREPHHLLP
Trigger: AGGGAGCAGGTGATGTGGTTCCCGGGGGCTGAGCAATGGCTCCAAGCATCCAAGGCCCCTTGCCTTTCTGGAGCTGGGTGAGAAGATCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222902.7
3UTR CAA 90 bp TCACCCAGCTCCAGAAAGGCAAGGGGCCTTGGATGCTTGGAGCCATaGCTCAGCCCCCGGGAACCACATCACCTGCTCCCTCGGGTTTTT +
Preference number: 2 (lower is better)
Translates to: SPSSRKARGLGCLEP*LSPREPHHLLPRVF
Trigger: AAAAACCCGAGGGAGCAGGTGATGTGGTTCCCGGGGGCTGAGCAATGGCTCCAAGCATCCAAGGCCCCTTGCCTTTCTGGAGCTGGGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222902.7
3UTR CAA 90 bp CTCCTTCTGGGATCTTCTCACCCAGCTCCAGAAAGGCAAGGGGCCTaGGATGCTTGGAGCCATTGCTCAGCCCCCGGGAACCACATCACC +
Preference number: 2 (lower is better)
Translates to: LLLGSSHPAPERQGA*DAWSHCSAPGNHIT
Trigger: GGTGATGTGGTTCCCGGGGGCTGAGCAATGGCTCCAAGCATCCAAGGCCCCTTGCCTTTCTGGAGCTGGGTGAGAAGATCCCAGAAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222902.7
3UTR-3UTR GCA 90 bp CCCTCACCAAAATGTGGGGTGAGCCCAGATTTGAAGGCAGTACAGGCCCTTGTCGGGAACCACATCACCTaGTCCCTCGGGTTTTTCATA +
Preference number: 2 (lower is better)
Translates to: PSPKCGVSPDLKAVQALVGNHIT*SLGFFI
Trigger: TATGAAAAACCCGAGGGAGCAGGTGATGTGGTTCCC...GACAAGGGCCTGTACTGCCTTCAAATCTGGGCTCACCCCACATTTTGGTGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000222902.7
3UTR-3UTR CCA 90 bp ACAGCAACTGTGTCTACACTCTTGATAAACCCACACAGTATATCATGCATAGAACCCCTCACCAAAATGTaGGGTGAGCCCAGATTTGAA +
Preference number: 2 (lower is better)
Translates to: TATVSTLLINPHSISCIEPLTKM*GEPRFE
Trigger: TTCAAATCTGGGCTCACCCCACATTTTGGTGAGGGG...TTCTATGCATGATATACTGTGTGGGTTTATCAAGAGTGTAGACACAGTTGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222902.7
3UTR-3UTR CCA 90 bp ACAGCAACTGTGTCTACACTCTTGATAAACCCACACAGTATATCATGCATAGAAAATACAAAAGTTAGTTaGGTGTGGTGGTACACACCT +
Preference number: 2 (lower is better)
Translates to: TATVSTLLINPHSISCIENTKVS*VWWYTP
Trigger: AGGTGTGTACCACCACACCCAACTAACTTTTGTATT...TTCTATGCATGATATACTGTGTGGGTTTATCAAGAGTGTAGACACAGTTGCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222902.7
3UTR GCA 72 bp CCAGAAAGGCAAGGGGCCTTGGATGCTTGGAGCCATTaGTCAGCCCCCGGGAACCACATCACCTGCTCCCTC +
Preference number: 3 (lower is better)
Translates to: PERQGALDAWSH*SAPGNHITCSL
Trigger: GAGGGAGCAGGTGATGTGGTTCCCGGGGGCTGAGCAATGGCTCCAAGCATCCAAGGCCCCTTGCCTTTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222902.7
3UTR CCA 72 bp CACCCAGCTCCAGAAAGGCAAGGGGCCTTGGATGCTTaGAGCCATTGCTCAGCCCCCGGGAACCACATCACC +
Preference number: 3 (lower is better)
Translates to: HPAPERQGALDA*SHCSAPGNHIT
Trigger: GGTGATGTGGTTCCCGGGGGCTGAGCAATGGCTCCAAGCATCCAAGGCCCCTTGCCTTTCTGGAGCTGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222902.7
3UTR CCA 72 bp GATCTTCTCACCCAGCTCCAGAAAGGCAAGGGGCCTTaGATGCTTGGAGCCATTGCTCAGCCCCCGGGAACC +
Preference number: 3 (lower is better)
Translates to: DLLTQLQKGKGP*MLGAIAQPPGT
Trigger: GGTTCCCGGGGGCTGAGCAATGGCTCCAAGCATCCAAGGCCCCTTGCCTTTCTGGAGCTGGGTGAGAAGATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222902.7
3UTR GCA 72 bp TTCTCACCCAGCTCCAGAAAGGCAAGGGGCCTTGGATaGTTGGAGCCATTGCTCAGCCCCCGGGAACCACAT +
Preference number: 3 (lower is better)
Translates to: FSPSSRKARGLG*LEPLLSPREPH
Trigger: ATGTGGTTCCCGGGGGCTGAGCAATGGCTCCAAGCATCCAAGGCCCCTTGCCTTTCTGGAGCTGGGTGAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222902.7
3UTR GCA 72 bp TGGAGCCATTGCTCAGCCCCCGGGAACCACATCACCTaGTCCCTCGGGTTTTTCATAGAAGAGACACATCCC +
Preference number: 3 (lower is better)
Translates to: WSHCSAPGNHIT*SLGFFIEETHP
Trigger: GGGATGTGTCTCTTCTATGAAAAACCCGAGGGAGCAGGTGATGTGGTTCCCGGGGGCTGAGCAATGGCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000222902.7
3UTR CCA 72 bp GGAGGAGAAGGCAAAGAGTTGCCACTGCTCTCCTTCTaGGATCTTCTCACCCAGCTCCAGAAAGGCAAGGGG +
Preference number: 3 (lower is better)
Translates to: GGEGKELPLLSF*DLLTQLQKGKG
Trigger: CCCCTTGCCTTTCTGGAGCTGGGTGAGAAGATCCCAGAAGGAGAGCAGTGGCAACTCTTTGCCTTCTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222902.7
3UTR-3UTR CAA 90 bp AGAAAGGCAAGGGGCCTTGGATGCTTGGAGCCATTGCTCAGCCCCCGGGAACCACATCCCTGGAGAGTGTaGCTAAGAAACAGGAAAATT +
Preference number: 3 (lower is better)
Translates to: RKARGLGCLEPLLSPREPHPWRV*LRNRKI
Trigger: AATTTTCCTGTTTCTTAGCAACACTCTCCAGGGATG...TGGTTCCCGGGGGCTGAGCAATGGCTCCAAGCATCCAAGGCCCCTTGCCTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000222902.7
3UTR-3UTR CAA 90 bp ACAGCAACTGTGTCTACACTCTTGATAAACCCACACAGTATATCATGCATAGAAGGAGAAGGCAAAGAGTaGCCACTGCTCTCCTTCTGG +
Preference number: 3 (lower is better)
Translates to: TATVSTLLINPHSISCIEGEGKE*PLLSFW
Trigger: CCAGAAGGAGAGCAGTGGCAACTCTTTGCCTTCTCC...TTCTATGCATGATATACTGTGTGGGTTTATCAAGAGTGTAGACACAGTTGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222902.7
3UTR CCA 72 bp TGCTCCCTCGGGTTTTTCATAGAAGAGACACATCCCTaGAGAGTGTTGCTAAGAAACAGGAAAATTAGCTCT +
Preference number: 3 (lower is better)
Translates to: CSLGFFIEETHP*RVLLRNRKISS
Trigger: AGAGCTAATTTTCCTGTTTCTTAGCAACACTCTCCAGGGATGTGTCTCTTCTATGAAAAACCCGAGGGAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222902.7
CDS-3UTR GCA 90 bp GCCCCGAGTAGCCCGCCAAGCAGCTCAGGCCCAAACTCAGGGCTGGAGGGCTGGGCCCTTGACAGCCACTaGCCTGGCCCTAGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: APSSPPSSSGPNSGLEGWALDSH*PGPRGS
Trigger: GCTTCCCCTAGGGCCAGGGCAGTGGCTGTCAAGGGC...CCAGCCCTCCAGCCCTGAGTTTGGGCCTGAGCTGCTTGGCGGGCTACTCGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222902.7
ENST00000416943.1
CDS-3UTR CCA 90 bp CCGAGTAGCCCGCCAAGCAGCTCAGGCCCAAACTCAGGGCTGGAGGGCTGGGCGTCAGGGCTGGAGGGCTaGGCGGGGATTAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: PSSPPSSSGPNSGLEGWASGLEG*AGISRW
Trigger: CCACCTGCTAATCCCCGCCCAGCCCTCCAGCCCTGA...CGCCCAGCCCTCCAGCCCTGAGTTTGGGCCTGAGCTGCTTGGCGGGCTACTCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222902.7
ENST00000416943.1
CDS-3UTR CCA 90 bp CCGAGTAGCCCGCCAAGCAGCTCAGGCCCAAACTCAGGGCTGGAGGGCTGGGCGGCCCAAACTCAGGGCTaGAGGGCTGGGCGGGGATTA +
Preference number: 4 (lower is better)
Translates to: PSSPPSSSGPNSGLEGWAAQTQG*RAGRGL
Trigger: TAATCCCCGCCCAGCCCTCCAGCCCTGAGTTTGGGC...CGCCCAGCCCTCCAGCCCTGAGTTTGGGCCTGAGCTGCTTGGCGGGCTACTCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222902.7
ENST00000416943.1
CDS-3UTR CCA 90 bp GCCCCGAGTAGCCCGCCAAGCAGCTCAGGCCCAAACTCAGGGCTGGAGGGCTGGGCCCAAACTCAGGGCTaGAGGGCTGGGCGGGGATTA +
Preference number: 4 (lower is better)
Translates to: APSSPPSSSGPNSGLEGWAQTQG*RAGRGL
Trigger: TAATCCCCGCCCAGCCCTCCAGCCCTGAGTTTGGGC...CCAGCCCTCCAGCCCTGAGTTTGGGCCTGAGCTGCTTGGCGGGCTACTCGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222902.7
ENST00000416943.1
CDS-3UTR TCA 90 bp CGAGTAGCCCGCCAAGCAGCTCAGGCCCAAACTCAGGGCTGGAGGGCTGGGCGGCTCGGGGCTCAAAGCTaGCGTGCAGGAGGAAAGGAC +
Preference number: 4 (lower is better)
Translates to: RVARQAAQAQTQGWRAGRLGAQS*RAGGKD
Trigger: GTCCTTTCCTCCTGCACGTCAGCTTTGAGCCCCGAG...CCGCCCAGCCCTCCAGCCCTGAGTTTGGGCCTGAGCTGCTTGGCGGGCTACTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222902.7
ENST00000416943.1
CDS-3UTR TCA 90 bp CCGAGTAGCCCGCCAAGCAGCTCAGGCCCAAACTCAGGGCTGGAGGGCTGGGCGCTCGGGGCTCAAAGCTaGCGTGCAGGAGGAAAGGAC +
Preference number: 4 (lower is better)
Translates to: PSSPPSSSGPNSGLEGWALGAQS*RAGGKD
Trigger: GTCCTTTCCTCCTGCACGTCAGCTTTGAGCCCCGAG...CGCCCAGCCCTCCAGCCCTGAGTTTGGGCCTGAGCTGCTTGGCGGGCTACTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222902.7
ENST00000416943.1
CDS-3UTR CCA 90 bp CCGAGTAGCCCGCCAAGCAGCTCAGGCCCAAACTCAGGGCTGGAGGGCTGGGCGGGACCCACTCCTGCTTaGGGTCGCCACAGAACTGCT +
Preference number: 4 (lower is better)
Translates to: PSSPPSSSGPNSGLEGWAGPTPA*GRHRTA
Trigger: AGCAGTTCTGTGGCGACCCCAAGCAGGAGTGGGTCC...CGCCCAGCCCTCCAGCCCTGAGTTTGGGCCTGAGCTGCTTGGCGGGCTACTCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222902.7
ENST00000416943.1
CDS-3UTR TCA 90 bp CGAGTAGCCCGCCAAGCAGCTCAGGCCCAAACTCAGGGCTGGAGGGCTGGGCGGAGATCACTCCTGCCTTaGGGCATGTGCTCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RVARQAAQAQTQGWRAGRRSLLP*GMCSCW
Trigger: CCAGCAGGAGCACATGCCTCAAGGCAGGAGTGATCT...CCGCCCAGCCCTCCAGCCCTGAGTTTGGGCCTGAGCTGCTTGGCGGGCTACTCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222902.7
ENST00000416943.1
CDS-3UTR CCA 90 bp CGAGTAGCCCGCCAAGCAGCTCAGGCCCAAACTCAGGGCTGGAGGGCTGGGCGGCCCGTAGGGATGATGTaGTGGGCACAGACACCAAGG +
Preference number: 4 (lower is better)
Translates to: RVARQAAQAQTQGWRAGRPVGMM*WAQTPR
Trigger: CCTTGGTGTCTGTGCCCACCACATCATCCCTACGGG...CCGCCCAGCCCTCCAGCCCTGAGTTTGGGCCTGAGCTGCTTGGCGGGCTACTCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222902.7
ENST00000416943.1
CDS-3UTR CCA 90 bp CTCCAGGCCCCGAGTAGCCCGCCAAGCAGCTCAGGCCCAAACTCAGGGCTGGAGGGACCCACTCCTGCTTaGGGTCGCCACAGAACTGCT +
Preference number: 4 (lower is better)
Translates to: LQAPSSPPSSSGPNSGLEGPTPA*GRHRTA
Trigger: AGCAGTTCTGTGGCGACCCCAAGCAGGAGTGGGTCC...CTCCAGCCCTGAGTTTGGGCCTGAGCTGCTTGGCGGGCTACTCGGGGCCTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222902.7
ENST00000416943.1
CDS-3UTR TCA 90 bp CCGAGTAGCCCGCCAAGCAGCTCAGGCCCAAACTCAGGGCTGGAGGGCTGGGCGTGGACAGCTGGTAGCTaGCCACTCGGTTCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: PSSPPSSSGPNSGLEGWAWTAGS*PLGSQE
Trigger: TTCCTGAGAACCGAGTGGTCAGCTACCAGCTGTCCA...CGCCCAGCCCTCCAGCCCTGAGTTTGGGCCTGAGCTGCTTGGCGGGCTACTCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222902.7
ENST00000416943.1
CDS-3UTR GCA 90 bp GCCCCGAGTAGCCCGCCAAGCAGCTCAGGCCCAAACTCAGGGCTGGAGGGCTGGGGGGAAGCCTTCTTCTaGTTGGCGTCCAGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: APSSPPSSSGPNSGLEGWGEAFF*LASRFF
Trigger: GAAGAACCTGGACGCCAAGCAGAAGAAGGCTTCCCC...CCAGCCCTCCAGCCCTGAGTTTGGGCCTGAGCTGCTTGGCGGGCTACTCGGGGC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000222902.7
ENST00000416943.1
CDS-3UTR CCA 90 bp GCCCCGAGTAGCCCGCCAAGCAGCTCAGGCCCAAACTCAGGGCTGGAGGGCTGGTCGCCACAGAACTGCTaGCCCTTCTTGGTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: APSSPPSSSGPNSGLEGWSPQNC*PFLVVK
Trigger: CTTCACCACCAAGAAGGGCCAGCAGTTCTGTGGCGA...CCAGCCCTCCAGCCCTGAGTTTGGGCCTGAGCTGCTTGGCGGGCTACTCGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222902.7
ENST00000416943.1
CDS-3UTR CCA 90 bp GCCCCGAGTAGCCCGCCAAGCAGCTCAGGCCCAAACTCAGGGCTGGAGGGCTGGTTGCCAGGATATCTCTaGACAGGGCCCTTGACAGCC +
Preference number: 4 (lower is better)
Translates to: APSSPPSSSGPNSGLEGWLPGYL*TGPLTA
Trigger: GGCTGTCAAGGGCCCTGTCCAGAGATATCCTGGCAA...CCAGCCCTCCAGCCCTGAGTTTGGGCCTGAGCTGCTTGGCGGGCTACTCGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222902.7
ENST00000416943.1
CDS-3UTR CCA 90 bp CCGAGTAGCCCGCCAAGCAGCTCAGGCCCAAACTCAGGGCTGGAGGGCTGGGCGTTGCCAGGATATCTCTaGACAGGGCCCTTGACAGCC +
Preference number: 4 (lower is better)
Translates to: PSSPPSSSGPNSGLEGWALPGYL*TGPLTA
Trigger: GGCTGTCAAGGGCCCTGTCCAGAGATATCCTGGCAA...CGCCCAGCCCTCCAGCCCTGAGTTTGGGCCTGAGCTGCTTGGCGGGCTACTCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222902.7
ENST00000416943.1
CDS-3UTR CCA 90 bp TGTGGCTTCTCCAGGCCCCGAGTAGCCCGCCAAGCAGCTCAGGCCCAAACTCAGGGGGCCTTGGATGCTTaGAGCCATTGCTCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: CGFSRPRVARQAAQAQTQGALDA*SHCSAP
Trigger: GGGGGCTGAGCAATGGCTCCAAGCATCCAAGGCCCC...CTGAGTTTGGGCCTGAGCTGCTTGGCGGGCTACTCGGGGCCTGGAGAAGCCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222902.7
CDS-3UTR GCA 90 bp GCCCCGAGTAGCCCGCCAAGCAGCTCAGGCCCAAACTCAGGGCTGGAGGGCTGGTATGGTCATCAGGCCTaGCATGTCTCAGAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: APSSPPSSSGPNSGLEGWYGHQA*HVSESR
Trigger: TCTGCTCTCTGAGACATGGCAGGCCTGATGACCATA...CCAGCCCTCCAGCCCTGAGTTTGGGCCTGAGCTGCTTGGCGGGCTACTCGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222902.7
ENST00000416943.1
CDS-3UTR GCA 90 bp CTCCAGGCCCCGAGTAGCCCGCCAAGCAGCTCAGGCCCAAACTCAGGGCTGGAGGGTGAAGATCACTCCTaGCTTGAGGCATGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LQAPSSPPSSSGPNSGLEGEDHS*LEACAP
Trigger: AGGAGCACATGCCTCAAGGCAGGAGTGATCTTCACC...CTCCAGCCCTGAGTTTGGGCCTGAGCTGCTTGGCGGGCTACTCGGGGCCTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222902.7
ENST00000416943.1
CDS-3UTR GCA 90 bp CGAGTAGCCCGCCAAGCAGCTCAGGCCCAAACTCAGGGCTGGAGGGCTGGGCGGAGCAGGTGGTTTGGTTaGCAGGATATCTCTGGACAG +
Preference number: 4 (lower is better)
Translates to: RVARQAAQAQTQGWRAGRSRWFG*QDISGQ
Trigger: CTGTCCAGAGATATCCTGGCAACCAAACCACCTGCT...CCGCCCAGCCCTCCAGCCCTGAGTTTGGGCCTGAGCTGCTTGGCGGGCTACTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222902.7
ENST00000416943.1
CDS-3UTR CCA 90 bp TGTGGCTTCTCCAGGCCCCGAGTAGCCCGCCAAGCAGCTCAGGCCCAAACTCAGCCCGTAGGGATGATGTaGTGGGCACAGACACCAAGG +
Preference number: 4 (lower is better)
Translates to: CGFSRPRVARQAAQAQTQPVGMM*WAQTPR
Trigger: CCTTGGTGTCTGTGCCCACCACATCATCCCTACGGG...CTGAGTTTGGGCCTGAGCTGCTTGGCGGGCTACTCGGGGCCTGGAGAAGCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222902.7
ENST00000416943.1
CDS-3UTR CCA 90 bp CTCCAGGCCCCGAGTAGCCCGCCAAGCAGCTCAGGCCCAAACTCAGGGCTGGAGTTCTTCATGTACCTCTaGACCCACTCCTGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: LQAPSSPPSSSGPNSGLEFFMYL*THSCLG
Trigger: CCCCAAGCAGGAGTGGGTCCAGAGGTACATGAAGAA...CTCCAGCCCTGAGTTTGGGCCTGAGCTGCTTGGCGGGCTACTCGGGGCCTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222902.7
ENST00000416943.1
CDS-3UTR CCA 90 bp CTCCAGGCCCCGAGTAGCCCGCCAAGCAGCTCAGGCCCAAACTCAGGGCTGGAGGCGGGGATTAGCAGGTaGTTTGGTTGCCAGGATATC +
Preference number: 4 (lower is better)
Translates to: LQAPSSPPSSSGPNSGLEAGISR*FGCQDI
Trigger: GATATCCTGGCAACCAAACCACCTGCTAATCCCCGC...CTCCAGCCCTGAGTTTGGGCCTGAGCTGCTTGGCGGGCTACTCGGGGCCTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222902.7
ENST00000416943.1
CDS-3UTR TCA 90 bp TGTGGCTTCTCCAGGCCCCGAGTAGCCCGCCAAGCAGCTCAGGCCCAAACTCAGTGGACAGCTGGTAGCTaGCCACTCGGTTCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: CGFSRPRVARQAAQAQTQWTAGS*PLGSQE
Trigger: TTCCTGAGAACCGAGTGGTCAGCTACCAGCTGTCCA...CTGAGTTTGGGCCTGAGCTGCTTGGCGGGCTACTCGGGGCCTGGAGAAGCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222902.7
ENST00000416943.1
CDS-3UTR GCA 90 bp AGAAAGGCAAGGGGCCTTGGATGCTTGGAGCCATTGCTCAGCCCCCGGGAACCAGGGTCGCCACAGAACTaGTGGCCCTTCTTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: RKARGLGCLEPLLSPREPGSPQN*WPFLVV
Trigger: CACCACCAAGAAGGGCCAGCAGTTCTGTGGCGACCC...TGGTTCCCGGGGGCTGAGCAATGGCTCCAAGCATCCAAGGCCCCTTGCCTTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222902.7
CDS-3UTR CCA 90 bp CTCCAGGCCCCGAGTAGCCCGCCAAGCAGCTCAGGCCCAAACTCAGGGCTGGAGGAAGGCTGGTTACTATaGTCATCAGGCCTGCCATGT +
Preference number: 4 (lower is better)
Translates to: LQAPSSPPSSSGPNSGLEEGWLL*SSGLPC
Trigger: ACATGGCAGGCCTGATGACCATAGTAACCAGCCTTC...CTCCAGCCCTGAGTTTGGGCCTGAGCTGCTTGGCGGGCTACTCGGGGCCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222902.7
ENST00000416943.1
CDS-3UTR CCA 90 bp CCGAGTAGCCCGCCAAGCAGCTCAGGCCCAAACTCAGGGCTGGAGGGCTGGGCGCAAGGAACAGAAGGCTaGTTACTATGGTCATCAGGC +
Preference number: 4 (lower is better)
Translates to: PSSPPSSSGPNSGLEGWAQGTEG*LLWSSG
Trigger: GCCTGATGACCATAGTAACCAGCCTTCTGTTCCTTG...CGCCCAGCCCTCCAGCCCTGAGTTTGGGCCTGAGCTGCTTGGCGGGCTACTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222902.7
ENST00000416943.1
CDS-3UTR CCA 90 bp TGTGGCTTCTCCAGGCCCCGAGTAGCCCGCCAAGCAGCTCAGGCCCAAACTCAGTCGCCACAGAACTGCTaGCCCTTCTTGGTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: CGFSRPRVARQAAQAQTQSPQNC*PFLVVK
Trigger: CTTCACCACCAAGAAGGGCCAGCAGTTCTGTGGCGA...CTGAGTTTGGGCCTGAGCTGCTTGGCGGGCTACTCGGGGCCTGGAGAAGCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222902.7
ENST00000416943.1
CDS-3UTR CCA 90 bp CCGAGTAGCCCGCCAAGCAGCTCAGGCCCAAACTCAGGGCTGGAGGGCTGGGCGAAGCCTTCTTCTGCTTaGCGTCCAGGTTCTTCATGT +
Preference number: 4 (lower is better)
Translates to: PSSPPSSSGPNSGLEGWAKPSSA*RPGSSC
Trigger: ACATGAAGAACCTGGACGCCAAGCAGAAGAAGGCTT...CGCCCAGCCCTCCAGCCCTGAGTTTGGGCCTGAGCTGCTTGGCGGGCTACTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222902.7
ENST00000416943.1
3UTR CAA 72 bp TCCAGAAAGGCAAGGGGCCTTGGATGCTTGGAGCCATaGCTCAGCCCCCGGGAACCACATCACCTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: SRKARGLGCLEP*LSPREPHHLLP
Trigger: AGGGAGCAGGTGATGTGGTTCCCGGGGGCTGAGCAATGGCTCCAAGCATCCAAGGCCCCTTGCCTTTCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222902.7
3UTR CAA 72 bp TCACCCAGCTCCAGAAAGGCAAGGGGCCTTGGATGCTaGGAGCCATTGCTCAGCCCCCGGGAACCACATCAC +
Preference number: 4 (lower is better)
Translates to: SPSSRKARGLGC*EPLLSPREPHH
Trigger: GTGATGTGGTTCCCGGGGGCTGAGCAATGGCTCCAAGCATCCAAGGCCCCTTGCCTTTCTGGAGCTGGGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222902.7
3UTR CAA 72 bp GGATCTTCTCACCCAGCTCCAGAAAGGCAAGGGGCCTaGGATGCTTGGAGCCATTGCTCAGCCCCCGGGAAC +
Preference number: 4 (lower is better)
Translates to: GSSHPAPERQGA*DAWSHCSAPGN
Trigger: GTTCCCGGGGGCTGAGCAATGGCTCCAAGCATCCAAGGCCCCTTGCCTTTCTGGAGCTGGGTGAGAAGATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222902.7
CDS-3UTR CCA 90 bp TGTGGCTTCTCCAGGCCCCGAGTAGCCCGCCAAGCAGCTCAGGCCCAAACTCAGAAAGGCAAGGGGCCTTaGATGCTTGGAGCCATTGCT +
Preference number: 4 (lower is better)
Translates to: CGFSRPRVARQAAQAQTQKGKGP*MLGAIA
Trigger: AGCAATGGCTCCAAGCATCCAAGGCCCCTTGCCTTT...CTGAGTTTGGGCCTGAGCTGCTTGGCGGGCTACTCGGGGCCTGGAGAAGCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222902.7
CDS-3UTR GCA 90 bp TGTGGCTTCTCCAGGCCCCGAGTAGCCCGCCAAGCAGCTCAGGCCCAAACTCAGTATGGTCATCAGGCCTaGCATGTCTCAGAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: CGFSRPRVARQAAQAQTQYGHQA*HVSESR
Trigger: TCTGCTCTCTGAGACATGGCAGGCCTGATGACCATA...CTGAGTTTGGGCCTGAGCTGCTTGGCGGGCTACTCGGGGCCTGGAGAAGCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222902.7
ENST00000416943.1
CDS-3UTR CCA 90 bp CGGGAACCACATCACCTGCTCCCTCGGGTTTTTCATAGAAGAGACACATCCCTGTCAGGGCTGGAGGGCTaGGCGGGGATTAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: REPHHLLPRVFHRRDTSLSGLEG*AGISRW
Trigger: CCACCTGCTAATCCCCGCCCAGCCCTCCAGCCCTGA...CAGGGATGTGTCTCTTCTATGAAAAACCCGAGGGAGCAGGTGATGTGGTTCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222902.7
CDS-3UTR CCA 90 bp CTCCAGGCCCCGAGTAGCCCGCCAAGCAGCTCAGGCCCAAACTCAGGGCTGGAGGAAGAGACACATCCCTaGAGAGTGTTGCTAAGAAAC +
Preference number: 4 (lower is better)
Translates to: LQAPSSPPSSSGPNSGLEEETHP*RVLLRN
Trigger: GTTTCTTAGCAACACTCTCCAGGGATGTGTCTCTTC...CTCCAGCCCTGAGTTTGGGCCTGAGCTGCTTGGCGGGCTACTCGGGGCCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222902.7
CDS-3UTR CCA 90 bp TGTGGCTTCTCCAGGCCCCGAGTAGCCCGCCAAGCAGCTCAGGCCCAAACTCAGCCCCTCACCAAAATGTaGGGTGAGCCCAGATTTGAA +
Preference number: 4 (lower is better)
Translates to: CGFSRPRVARQAAQAQTQPLTKM*GEPRFE
Trigger: TTCAAATCTGGGCTCACCCCACATTTTGGTGAGGGG...CTGAGTTTGGGCCTGAGCTGCTTGGCGGGCTACTCGGGGCCTGGAGAAGCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000222902.7
CDS-3UTR GCA 90 bp GCAAGGGGCCTTGGATGCTTGGAGCCATTGCTCAGCCCCCGGGAACCACATCACGGGAACCACATCACCTaGTCCCTCGGGTTTTTCATA +
Preference number: 4 (lower is better)
Translates to: ARGLGCLEPLLSPREPHHGNHIT*SLGFFI
Trigger: TATGAAAAACCCGAGGGAGCAGGTGATGTGGTTCCC...GTGATGTGGTTCCCGGGGGCTGAGCAATGGCTCCAAGCATCCAAGGCCCCTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000222902.7
CDS-3UTR GCA 90 bp CCCTCACCAAAATGTGGGGTGAGCCCAGATTTGAAGGCAGTACAGGCCCTTGTCGATGCTTGGAGCCATTaGTCAGCCCCCGGGAACCAC +
Preference number: 4 (lower is better)
Translates to: PSPKCGVSPDLKAVQALVDAWSH*SAPGNH
Trigger: GTGGTTCCCGGGGGCTGAGCAATGGCTCCAAGCATC...GACAAGGGCCTGTACTGCCTTCAAATCTGGGCTCACCCCACATTTTGGTGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000222902.7
CDS-3UTR GCA 90 bp CTCAGCCCCCGGGAACCACATCACCTGCTCCCTCGGGTTTTTCATAGAAGAGACGCAAGGGGCCTTGGATaGTTGGAGCCATTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: LSPREPHHLLPRVFHRRDARGLG*LEPLLS
Trigger: GCTGAGCAATGGCTCCAAGCATCCAAGGCCCCTTGC...GTCTCTTCTATGAAAAACCCGAGGGAGCAGGTGATGTGGTTCCCGGGGGCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000222902.7
CDS-3UTR GCA 90 bp CTCAGCCCCCGGGAACCACATCACCTGCTCCCTCGGGTTTTTCATAGAAGAGACCCAGGAGGCGGAGGTTaGAGTGAACCGAGATTGTGC +
Preference number: 4 (lower is better)
Translates to: LSPREPHHLLPRVFHRRDPGGGG*SEPRLC
Trigger: GCACAATCTCGGTTCACTGCAACCTCCGCCTCCTGG...GTCTCTTCTATGAAAAACCCGAGGGAGCAGGTGATGTGGTTCCCGGGGGCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000222902.7
CDS-3UTR CCA 90 bp GCCCCGAGTAGCCCGCCAAGCAGCTCAGGCCCAAACTCAGGGCTGGAGGGCTGGTCTCAGGAATTCTCTTaGAAACAAAGAACATGCAGC +
Preference number: 4 (lower is better)
Translates to: APSSPPSSSGPNSGLEGWSQEFS*KQRTCS
Trigger: GCTGCATGTTCTTTGTTTCCAAGAGAATTCCTGAGA...CCAGCCCTCCAGCCCTGAGTTTGGGCCTGAGCTGCTTGGCGGGCTACTCGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222902.7
ENST00000416943.1
CDS-3UTR GCA 90 bp TTCTGGGATCTTCTCACCCAGCTCCAGAAAGGCAAGGGGCCTTGGATGCTTGGAGGGGAAGCCTTCTTCTaGTTGGCGTCCAGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: FWDLLTQLQKGKGPWMLGGEAFF*LASRFF
Trigger: GAAGAACCTGGACGCCAAGCAGAAGAAGGCTTCCCC...TCCAAGCATCCAAGGCCCCTTGCCTTTCTGGAGCTGGGTGAGAAGATCCCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222902.7
CDS-3UTR CCA 90 bp AGAAAGGCAAGGGGCCTTGGATGCTTGGAGCCATTGCTCAGCCCCCGGGAACCAAAGCCTTCTTCTGCTTaGCGTCCAGGTTCTTCATGT +
Preference number: 4 (lower is better)
Translates to: RKARGLGCLEPLLSPREPKPSSA*RPGSSC
Trigger: ACATGAAGAACCTGGACGCCAAGCAGAAGAAGGCTT...TGGTTCCCGGGGGCTGAGCAATGGCTCCAAGCATCCAAGGCCCCTTGCCTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222902.7
CDS-3UTR CCA 90 bp TTCTGGGATCTTCTCACCCAGCTCCAGAAAGGCAAGGGGCCTTGGATGCTTGGATTAAACTACCCAGGCTaGCCCTTCACCCCAGTCCTC +
Preference number: 4 (lower is better)
Translates to: FWDLLTQLQKGKGPWMLGLNYPG*PFTPVL
Trigger: GAGGACTGGGGTGAAGGGCCAGCCTGGGTAGTTTAA...TCCAAGCATCCAAGGCCCCTTGCCTTTCTGGAGCTGGGTGAGAAGATCCCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222902.7
CDS-3UTR GCA 90 bp CCCTCACCAAAATGTGGGGTGAGCCCAGATTTGAAGGCAGTACAGGCCCTTGTCGGTGAAGATCACTCCTaGCTTGAGGCATGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: PSPKCGVSPDLKAVQALVGEDHS*LEACAP
Trigger: AGGAGCACATGCCTCAAGGCAGGAGTGATCTTCACC...GACAAGGGCCTGTACTGCCTTCAAATCTGGGCTCACCCCACATTTTGGTGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222902.7
CDS-3UTR GCA 90 bp CCCTCACCAAAATGTGGGGTGAGCCCAGATTTGAAGGCAGTACAGGCCCTTGTCAGCAGGTGGTTTGGTTaGCAGGATATCTCTGGACAG +
Preference number: 4 (lower is better)
Translates to: PSPKCGVSPDLKAVQALVSRWFG*QDISGQ
Trigger: CTGTCCAGAGATATCCTGGCAACCAAACCACCTGCT...GACAAGGGCCTGTACTGCCTTCAAATCTGGGCTCACCCCACATTTTGGTGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222902.7
CDS-3UTR GCA 90 bp TTCTGGGATCTTCTCACCCAGCTCCAGAAAGGCAAGGGGCCTTGGATGCTTGGAGCAAAGAGTTGCCACTaGTCTCCTTCTGGGATCTTC +
Preference number: 4 (lower is better)
Translates to: FWDLLTQLQKGKGPWMLGAKSCH*SPSGIF
Trigger: GAAGATCCCAGAAGGAGAGCAGTGGCAACTCTTTGC...TCCAAGCATCCAAGGCCCCTTGCCTTTCTGGAGCTGGGTGAGAAGATCCCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222902.7
CDS-3UTR CCA 90 bp GCAAGGGGCCTTGGATGCTTGGAGCCATTGCTCAGCCCCCGGGAACCACATCACAATACAAAAGTTAGTTaGGTGTGGTGGTACACACCT +
Preference number: 4 (lower is better)
Translates to: ARGLGCLEPLLSPREPHHNTKVS*VWWYTP
Trigger: AGGTGTGTACCACCACACCCAACTAACTTTTGTATT...GTGATGTGGTTCCCGGGGGCTGAGCAATGGCTCCAAGCATCCAAGGCCCCTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000222902.7
CDS-3UTR CCA 90 bp TTCTGGGATCTTCTCACCCAGCTCCAGAAAGGCAAGGGGCCTTGGATGCTTGGACAAGGAACAGAAGGCTaGTTACTATGGTCATCAGGC +
Preference number: 4 (lower is better)
Translates to: FWDLLTQLQKGKGPWMLGQGTEG*LLWSSG
Trigger: GCCTGATGACCATAGTAACCAGCCTTCTGTTCCTTG...TCCAAGCATCCAAGGCCCCTTGCCTTTCTGGAGCTGGGTGAGAAGATCCCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222902.7
CDS-3UTR TCA 90 bp CCCTCACCAAAATGTGGGGTGAGCCCAGATTTGAAGGCAGTACAGGCCCTTGTCATTTGGCCTATTATTTaGGAACAGCAACTGTGTCTA +
Preference number: 4 (lower is better)
Translates to: PSPKCGVSPDLKAVQALVIWPII*EQQLCL
Trigger: TAGACACAGTTGCTGTTCTCAAATAATAGGCCAAAT...GACAAGGGCCTGTACTGCCTTCAAATCTGGGCTCACCCCACATTTTGGTGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222902.7
CDS-3UTR GCA 90 bp GAGAACAGCAACTGTGTCTACACTCTTGATAAACCCACACAGTATATCATGCATGAGAAGGCAAAGAGTTaGCACTGCTCTCCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: ENSNCVYTLDKPTQYIMHEKAKS*HCSPSG
Trigger: CCCAGAAGGAGAGCAGTGGCAACTCTTTGCCTTCTC...ATGCATGATATACTGTGTGGGTTTATCAAGAGTGTAGACACAGTTGCTGTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222902.7
CDS-3UTR CCA 90 bp GAGAACAGCAACTGTGTCTACACTCTTGATAAACCCACACAGTATATCATGCATGTAGGGATGATGTGGTaGGCACAGACACCAAGGAAC +
Preference number: 4 (lower is better)
Translates to: ENSNCVYTLDKPTQYIMHVGMMW*AQTPRN
Trigger: GTTCCTTGGTGTCTGTGCCCACCACATCATCCCTAC...ATGCATGATATACTGTGTGGGTTTATCAAGAGTGTAGACACAGTTGCTGTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222902.7
CDS-3UTR CCA 90 bp GAGAACAGCAACTGTGTCTACACTCTTGATAAACCCACACAGTATATCATGCATTTCTTCATGTACCTCTaGACCCACTCCTGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: ENSNCVYTLDKPTQYIMHFFMYL*THSCLG
Trigger: CCCCAAGCAGGAGTGGGTCCAGAGGTACATGAAGAA...ATGCATGATATACTGTGTGGGTTTATCAAGAGTGTAGACACAGTTGCTGTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222902.7
CDS-3UTR CCA 90 bp GAGAACAGCAACTGTGTCTACACTCTTGATAAACCCACACAGTATATCATGCATGAAGGCTGGTTACTATaGTCATCAGGCCTGCCATGT +
Preference number: 4 (lower is better)
Translates to: ENSNCVYTLDKPTQYIMHEGWLL*SSGLPC
Trigger: ACATGGCAGGCCTGATGACCATAGTAACCAGCCTTC...ATGCATGATATACTGTGTGGGTTTATCAAGAGTGTAGACACAGTTGCTGTTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222902.7
CDS-3UTR CCA 90 bp ACAGCAACTGTGTCTACACTCTTGATAAACCCACACAGTATATCATGCATAGAAGCGGGGATTAGCAGGTaGTTTGGTTGCCAGGATATC +
Preference number: 4 (lower is better)
Translates to: TATVSTLLINPHSISCIEAGISR*FGCQDI
Trigger: GATATCCTGGCAACCAAACCACCTGCTAATCCCCGC...TTCTATGCATGATATACTGTGTGGGTTTATCAAGAGTGTAGACACAGTTGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222902.7
CDS-3UTR CCA 90 bp ACAGCAACTGTGTCTACACTCTTGATAAACCCACACAGTATATCATGCATAGAAGTCCCCAAGACAGCATaGAGCAACCTGTCACAAAGC +
Preference number: 4 (lower is better)
Translates to: TATVSTLLINPHSISCIEVPKTA*SNLSQS
Trigger: GCTTTGTGACAGGTTGCTCCATGCTGTCTTGGGGAC...TTCTATGCATGATATACTGTGTGGGTTTATCAAGAGTGTAGACACAGTTGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222902.7
CDS-3UTR CAA 90 bp GCCCCGAGTAGCCCGCCAAGCAGCTCAGGCCCAAACTCAGGGCTGGAGGGCTGGAGGGGCCTTGGATGCTaGGAGCCATTGCTCAGCCCC +
Preference number: 5 (lower is better)
Translates to: APSSPPSSSGPNSGLEGWRGLGC*EPLLSP
Trigger: GGGGCTGAGCAATGGCTCCAAGCATCCAAGGCCCCT...CCAGCCCTCCAGCCCTGAGTTTGGGCCTGAGCTGCTTGGCGGGCTACTCGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222902.7
CDS CCA 90 bp AGGCCCCGAGTAGCCCGCCAAGCAGCTCAGGCCCAAACTCAGGGCTaGAGGGCTGGGCGGGGATTAGCAGGTGGTTTGGTTGCCAGGATA +
Preference number: 5 (lower is better)
Translates to: RPRVARQAAQAQTQG*RAGRGLAGGLVARI
Trigger: TATCCTGGCAACCAAACCACCTGCTAATCCCCGCCCAGCCCTCCAGCCCTGAGTTTGGGCCTGAGCTGCTTGGCGGGCTACTCGGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222902.7
ENST00000416943.1
CDS-3UTR CAA 90 bp CGAGTAGCCCGCCAAGCAGCTCAGGCCCAAACTCAGGGCTGGAGGGCTGGGCGGGGAGAAGGCAAAGAGTaGCCACTGCTCTCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: RVARQAAQAQTQGWRAGRGEGKE*PLLSFW
Trigger: CCAGAAGGAGAGCAGTGGCAACTCTTTGCCTTCTCC...CCGCCCAGCCCTCCAGCCCTGAGTTTGGGCCTGAGCTGCTTGGCGGGCTACTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222902.7
CDS-3UTR CAA 90 bp CCGAGTAGCCCGCCAAGCAGCTCAGGCCCAAACTCAGGGCTGGAGGGCTGGGCGGGATTAGCAGGTGGTTaGGTTGCCAGGATATCTCTG +
Preference number: 5 (lower is better)
Translates to: PSSPPSSSGPNSGLEGWAGLAGG*VARISL
Trigger: CAGAGATATCCTGGCAACCAAACCACCTGCTAATCC...CGCCCAGCCCTCCAGCCCTGAGTTTGGGCCTGAGCTGCTTGGCGGGCTACTCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222902.7
ENST00000416943.1
CDS-3UTR CAA 90 bp TGTGGCTTCTCCAGGCCCCGAGTAGCCCGCCAAGCAGCTCAGGCCCAAACTCAGAAGATCACTCCTGCCTaGAGGCATGTGCTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: CGFSRPRVARQAAQAQTQKITPA*RHVLLL
Trigger: CAGCAGGAGCACATGCCTCAAGGCAGGAGTGATCTT...CTGAGTTTGGGCCTGAGCTGCTTGGCGGGCTACTCGGGGCCTGGAGAAGCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222902.7
ENST00000416943.1
CDS GCA 90 bp GGTTTGGTTGCCAGGATATCTCTGGACAGGGCCCTTGACAGCCACTaGCCTGGCCCTAGGGGAAGCCTTCTTCTGCTTGGCGTCCAGGTT +
Preference number: 5 (lower is better)
Translates to: GLVARISLDRALDSH*PGPRGSLLLLGVQV
Trigger: AACCTGGACGCCAAGCAGAAGAAGGCTTCCCCTAGGGCCAGGGCAGTGGCTGTCAAGGGCCCTGTCCAGAGATATCCTGGCAACCAAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222902.7
ENST00000416943.1
CDS-3UTR CAA 90 bp CCGAGTAGCCCGCCAAGCAGCTCAGGCCCAAACTCAGGGCTGGAGGGCTGGGCGCATCCCTGGAGAGTGTaGCTAAGAAACAGGAAAATT +
Preference number: 5 (lower is better)
Translates to: PSSPPSSSGPNSGLEGWAHPWRV*LRNRKI
Trigger: AATTTTCCTGTTTCTTAGCAACACTCTCCAGGGATG...CGCCCAGCCCTCCAGCCCTGAGTTTGGGCCTGAGCTGCTTGGCGGGCTACTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222902.7
ENST00000416943.1
CDS-3UTR CAA 90 bp CCCTCACCAAAATGTGGGGTGAGCCCAGATTTGAAGGCAGTACAGGCCCTTGTCGGATGCTTGGAGCCATaGCTCAGCCCCCGGGAACCA +
Preference number: 5 (lower is better)
Translates to: PSPKCGVSPDLKAVQALVGCLEP*LSPREP
Trigger: TGGTTCCCGGGGGCTGAGCAATGGCTCCAAGCATCC...GACAAGGGCCTGTACTGCCTTCAAATCTGGGCTCACCCCACATTTTGGTGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000222902.7
CDS-3UTR CAA 90 bp GCCCCGAGTAGCCCGCCAAGCAGCTCAGGCCCAAACTCAGGGCTGGAGGGCTGGTTCTCAGGAATTCTCTaGGAAACAAAGAACATGCAG +
Preference number: 5 (lower is better)
Translates to: APSSPPSSSGPNSGLEGWFSGIL*ETKNMQ
Trigger: CTGCATGTTCTTTGTTTCCAAGAGAATTCCTGAGAA...CCAGCCCTCCAGCCCTGAGTTTGGGCCTGAGCTGCTTGGCGGGCTACTCGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222902.7
ENST00000416943.1
CDS TCA 90 bp CTGCCATGTCTCAGAGAGCAGAAGCACCAGCTCGGGGCTCAAAGCTaGCGTGCAGGAGGAAAGGACCTAGGGATAAATAGCTCGGGTCCT +
Preference number: 5 (lower is better)
Translates to: LPCLREQKHQLGAQS*RAGGKDLGINSSGP
Trigger: AGGACCCGAGCTATTTATCCCTAGGTCCTTTCCTCCTGCACGTCAGCTTTGAGCCCCGAGCTGGTGCTTCTGCTCTCTGAGACATGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222902.7
CDS-3UTR CAA 90 bp CCCTCACCAAAATGTGGGGTGAGCCCAGATTTGAAGGCAGTACAGGCCCTTGTCAGGCAGTACAGGCCCTaGTCCCCAAGACAGCATGGA +
Preference number: 5 (lower is better)
Translates to: PSPKCGVSPDLKAVQALVRQYRP*SPRQHG
Trigger: TCCATGCTGTCTTGGGGACAAGGGCCTGTACTGCCT...GACAAGGGCCTGTACTGCCTTCAAATCTGGGCTCACCCCACATTTTGGTGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000222902.7
CDS GCA 90 bp ACAGACACCAAGGAACAGAAGGCTGGTTACTATGGTCATCAGGCCTaGCATGTCTCAGAGAGCAGAAGCACCAGCTCGGGGCTCAAAGCT +
Preference number: 5 (lower is better)
Translates to: TDTKEQKAGYYGHQA*HVSESRSTSSGLKA
Trigger: AGCTTTGAGCCCCGAGCTGGTGCTTCTGCTCTCTGAGACATGGCAGGCCTGATGACCATAGTAACCAGCCTTCTGTTCCTTGGTGTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222902.7
ENST00000416943.1
CDS-3UTR CAA 90 bp CCCTCACCAAAATGTGGGGTGAGCCCAGATTTGAAGGCAGTACAGGCCCTTGTCGGATTAGCAGGTGGTTaGGTTGCCAGGATATCTCTG +
Preference number: 5 (lower is better)
Translates to: PSPKCGVSPDLKAVQALVGLAGG*VARISL
Trigger: CAGAGATATCCTGGCAACCAAACCACCTGCTAATCC...GACAAGGGCCTGTACTGCCTTCAAATCTGGGCTCACCCCACATTTTGGTGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222902.7
CDS-3UTR CAA 90 bp GCAAGGGGCCTTGGATGCTTGGAGCCATTGCTCAGCCCCCGGGAACCACATCACACTGTGTCTACACTCTaGATAAACCCACACAGTATA +
Preference number: 5 (lower is better)
Translates to: ARGLGCLEPLLSPREPHHTVSTL*INPHSI
Trigger: TATACTGTGTGGGTTTATCAAGAGTGTAGACACAGT...GTGATGTGGTTCCCGGGGGCTGAGCAATGGCTCCAAGCATCCAAGGCCCCTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222902.7
CDS-3UTR CAA 90 bp AGAAAGGCAAGGGGCCTTGGATGCTTGGAGCCATTGCTCAGCCCCCGGGAACCATTCTCAGGAATTCTCTaGGAAACAAAGAACATGCAG +
Preference number: 5 (lower is better)
Translates to: RKARGLGCLEPLLSPREPFSGIL*ETKNMQ
Trigger: CTGCATGTTCTTTGTTTCCAAGAGAATTCCTGAGAA...TGGTTCCCGGGGGCTGAGCAATGGCTCCAAGCATCCAAGGCCCCTTGCCTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222902.7
CDS-3UTR CAA 90 bp CTGGGATCTTCTCACCCAGCTCCAGAAAGGCAAGGGGCCTTGGATGCTTGGAGCCATCCCTGGAGAGTGTaGCTAAGAAACAGGAAAATT +
Preference number: 5 (lower is better)
Translates to: LGSSHPAPERQGALDAWSHPWRV*LRNRKI
Trigger: AATTTTCCTGTTTCTTAGCAACACTCTCCAGGGATG...GCTCCAAGCATCCAAGGCCCCTTGCCTTTCTGGAGCTGGGTGAGAAGATCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222902.7
CDS CCA 72 bp GTAGCCCGCCAAGCAGCTCAGGCCCAAACTCAGGGCTaGAGGGCTGGGCGGGGATTAGCAGGTGGTTTGGTT +
Preference number: 6 (lower is better)
Translates to: VARQAAQAQTQG*RAGRGLAGGLV
Trigger: AACCAAACCACCTGCTAATCCCCGCCCAGCCCTCCAGCCCTGAGTTTGGGCCTGAGCTGCTTGGCGGGCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222902.7
ENST00000416943.1
CDS GCA 72 bp GCCAGGATATCTCTGGACAGGGCCCTTGACAGCCACTaGCCTGGCCCTAGGGGAAGCCTTCTTCTGCTTGGC +
Preference number: 6 (lower is better)
Translates to: ARISLDRALDSH*PGPRGSLLLLG
Trigger: GCCAAGCAGAAGAAGGCTTCCCCTAGGGCCAGGGCAGTGGCTGTCAAGGGCCCTGTCCAGAGATATCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222902.7
ENST00000416943.1
CDS TCA 72 bp CTCAGAGAGCAGAAGCACCAGCTCGGGGCTCAAAGCTaGCGTGCAGGAGGAAAGGACCCGGAGGTAACAGGG +
Preference number: 6 (lower is better)
Translates to: LREQKHQLGAQS*RAGGKDPEVTG
Trigger: CCCTGTTACCTCCGGGTCCTTTCCTCCTGCACGTCAGCTTTGAGCCCCGAGCTGGTGCTTCTGCTCTCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416943.1
CDS CCA 72 bp AACTCAGGGCTGGAGGGCTGGGCGGGGATTAGCAGGTaGTTTGGTTGCCAGGATATCTCTGGACAGGGCCCT +
Preference number: 6 (lower is better)
Translates to: NSGLEGWAGISR*FGCQDISGQGP
Trigger: AGGGCCCTGTCCAGAGATATCCTGGCAACCAAACCACCTGCTAATCCCCGCCCAGCCCTCCAGCCCTGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222902.7
ENST00000416943.1
CDS CAA 72 bp GCCACTGCCCTGGCCCTAGGGGAAGCCTTCTTCTGCTaGGCGTCCAGGTTCTTCATGTACCTCTGGACCCAC +
Preference number: 6 (lower is better)
Translates to: ATALALGEAFFC*ASRFFMYLWTH
Trigger: GTGGGTCCAGAGGTACATGAAGAACCTGGACGCCAAGCAGAAGAAGGCTTCCCCTAGGGCCAGGGCAGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222902.7
ENST00000416943.1
CDS CAA 90 bp CCCTTGACAGCCACTGCCCTGGCCCTAGGGGAAGCCTTCTTCTGCTaGGCGTCCAGGTTCTTCATGTACCTCTGGACCCACTCCTGCTTG +
Preference number: 6 (lower is better)
Translates to: PLTATALALGEAFFC*ASRFFMYLWTHSCL
Trigger: CAAGCAGGAGTGGGTCCAGAGGTACATGAAGAACCTGGACGCCAAGCAGAAGAAGGCTTCCCCTAGGGCCAGGGCAGTGGCTGTCAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222902.7
ENST00000416943.1
CDS GCA 72 bp ACAGCCACTGCCCTGGCCCTAGGGGAAGCCTTCTTCTaGTTGGCGTCCAGGTTCTTCATGTACCTCTGGACC +
Preference number: 6 (lower is better)
Translates to: TATALALGEAFF*LASRFFMYLWT
Trigger: GGTCCAGAGGTACATGAAGAACCTGGACGCCAAGCAGAAGAAGGCTTCCCCTAGGGCCAGGGCAGTGGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222902.7
ENST00000416943.1
CDS CCA 72 bp GGAGAGGGGATGACCACAGAGCCCGTAGGGATGATGTaGTGGGCACAGACACCAAGGAACAGAAGGCTGGTT +
Preference number: 6 (lower is better)
Translates to: GEGMTTEPVGMM*WAQTPRNRRLV
Trigger: AACCAGCCTTCTGTTCCTTGGTGTCTGTGCCCACCACATCATCCCTACGGGCTCTGTGGTCATCCCCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222902.7
ENST00000416943.1
CDS CAA 72 bp TCCTGCTTGGGGTCGCCACAGAACTGCTGGCCCTTCTaGGTGGTGAAGATCACTCCTGCCTTGAGGCATGTG +
Preference number: 6 (lower is better)
Translates to: SCLGSPQNCWPF*VVKITPALRHV
Trigger: CACATGCCTCAAGGCAGGAGTGATCTTCACCACCAAGAAGGGCCAGCAGTTCTGTGGCGACCCCAAGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222902.7
ENST00000416943.1
CDS TCA 72 bp CTCAGAGAGCAGAAGCACCAGCTCGGGGCTCAAAGCTaGCGTGCAGGAGGAAAGGACCTAGGGATAAATAGC +
Preference number: 6 (lower is better)
Translates to: LREQKHQLGAQS*RAGGKDLGINS
Trigger: GCTATTTATCCCTAGGTCCTTTCCTCCTGCACGTCAGCTTTGAGCCCCGAGCTGGTGCTTCTGCTCTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222902.7
CDS GCA 72 bp AAGGAACAGAAGGCTGGTTACTATGGTCATCAGGCCTaGCATGTCTCAGAGAGCAGAAGCACCAGCTCGGGG +
Preference number: 6 (lower is better)
Translates to: KEQKAGYYGHQA*HVSESRSTSSG
Trigger: CCCCGAGCTGGTGCTTCTGCTCTCTGAGACATGGCAGGCCTGATGACCATAGTAACCAGCCTTCTGTTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222902.7
ENST00000416943.1