Pregenerated sensors for CCL21 (Homo sapiens)
Ensembl gene IDs: ENSG00000137077Ensembl transcript IDs: ENST00000259607.7, ENST00000378792.1
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTTCAAGCGCTGGTGAGGCTGGTGGGGTCTCCAGGGCTCCAGGCTaGTCACTGGGCTATGGCCCTTTAGGGGTCTGTGACCGCTCAGTC | + |
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Preference number: 1 (lower is better) Translates to: ASSAGEAGGVSRAPG*SLGYGPLGVCDRSV Trigger: GACTGAGCGGTCACAGACCCCTAAAGGGCCATAGCCCAGTGAGCAGCCTGGAGCCCTGGAGACCCCACCAGCCTCACCAGCGCTTGAAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378792.1 |
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| 3UTR CCA 90 bp | GGTGGCTGCTCCAGGGCCCCTGAGCATAGCCTCCTTCTTGCATCTTaGGTTCAGGCTTCAAGCGCTGGTGAGGCTGGTGGGGTCTCCAGG | + |
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Preference number: 1 (lower is better) Translates to: GGCSRAPEHSLLLAS*VQASSAGEAGGVSR Trigger: CCTGGAGACCCCACCAGCCTCACCAGCGCTTGAAGCCTGAACCCAAGATGCAAGAAGGAGGCTATGCTCAGGGGCCCTGGAGCAGCCACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000259607.7 ENST00000378792.1 |
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| 3UTR GCA 90 bp | TATCAGGTCCAGGGTCCTGATGATTCTCCTTCAAGGGGACAGTCCTaGTGCCTCCTCTCATGCTCCCTGGGAGACTCTCCCTCCTCGGTC | + |
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Preference number: 1 (lower is better) Translates to: YQVQGPDDSPSRGQS*CLLSCSLGDSPSSV Trigger: GACCGAGGAGGGAGAGTCTCCCAGGGAGCATGAGAGGAGGCAGCAGGACTGTCCCCTTGAAGGAGAATCATCAGGACCCTGGACCTGATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000259607.7 |
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| 3UTR-3UTR GCA 90 bp | CCTCCTCTCATGCTCCCTGGGAGACTCTCCCTCCTCGGTCTCTCTGGACCTGGCCCAGCATGGGGTGGCTaGTCCAGGGCCCCTGAGCAT | + |
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Preference number: 2 (lower is better) Translates to: PPLMLPGRLSLLGLSGPGPAWGG*SRAPEH Trigger: ATGCTCAGGGGCCCTGGAGCAGCCACCCCATGCTGG...GCCAGGTCCAGAGAGACCGAGGAGGGAGAGTCTCCCAGGGAGCATGAGAGGAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000259607.7 |
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| 3UTR CAA 90 bp | CAGCATGGGGTGGCTGCTCCAGGGCCCCTGAGCATAGCCTCCTTCTaGCATCTTGGGTTCAGGCTTCAAGCGCTGGTGAGGCTGGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: QHGVAAPGPLSIASF*HLGFRLQALVRLVG Trigger: CCCCACCAGCCTCACCAGCGCTTGAAGCCTGAACCCAAGATGCAAGAAGGAGGCTATGCTCAGGGGCCCTGGAGCAGCCACCCCATGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000259607.7 ENST00000378792.1 |
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| 3UTR-3UTR TCA 90 bp | GCCTCCTTCTTGCATCTTGGGTTCAGGCTTCAAGCGCTGGTGAGGCTGGTGGGGGGCTTCAAGCGCTGGTaGGGCTGGTGGGGTCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: ASFLHLGFRLQALVRLVGGFKRW*GWWGLQ Trigger: CTGGAGACCCCACCAGCCTCACCAGCGCTTGAAGCC...CCCCACCAGCCTCACCAGCGCTTGAAGCCTGAACCCAAGATGCAAGAAGGAGGC 63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000259607.7 ENST00000378792.1 |
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| 3UTR-3UTR CCA 90 bp | TCCAGGGCCCCTGAGCATAGCCTCCTTCTTGCATCTTGGGTTCAGGCTTCAAGCGTGGCAAGGCCAGCATaGGGTGGCTGCTCCAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: SRAPEHSLLLASWVQASSVARPA*GGCSRA Trigger: GGCCCTGGAGCAGCCACCCCATGCTGGCCTTGCCAC...GCTTGAAGCCTGAACCCAAGATGCAAGAAGGAGGCTATGCTCAGGGGCCCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000259607.7 |
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| 3UTR-3UTR CCA 90 bp | GGGAGCCGTATCAGGTCCAGGGTCCTGATGATTCTCCTTCAAGGGGACAGTCCTCTCCTTCTTGCATCTTaGGTTCAGGCTTCAAGCGCT | + |
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Preference number: 2 (lower is better) Translates to: GSRIRSRVLMILLQGDSPLLLAS*VQASSA Trigger: AGCGCTTGAAGCCTGAACCCAAGATGCAAGAAGGAG...AGGACTGTCCCCTTGAAGGAGAATCATCAGGACCCTGGACCTGATACGGCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000259607.7 |
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| 3UTR TCA 72 bp | AGGCTGCTCACTGGGCTATGGCCCTTTAGGGGTCTGTaGCCGCTCAGTCCTGTGAGGGCAGAAGAGGGGTGT | + |
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Preference number: 3 (lower is better) Translates to: RLLTGLWPFRGL*PLSPVRAEEGC Trigger: ACACCCCTCTTCTGCCCTCACAGGACTGAGCGGTCACAGACCCCTAAAGGGCCATAGCCCAGTGAGCAGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378792.1 |
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| 3UTR CCA 72 bp | TCCAGGGCCCCTGAGCATAGCCTCCTTCTTGCATCTTaGGTTCAGGCTTCAAGCGCTGGTGAGGCTGGTGGG | + |
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Preference number: 3 (lower is better) Translates to: SRAPEHSLLLAS*VQASSAGEAGG Trigger: CCCACCAGCCTCACCAGCGCTTGAAGCCTGAACCCAAGATGCAAGAAGGAGGCTATGCTCAGGGGCCCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259607.7 ENST00000378792.1 |
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| 3UTR-3UTR CAA 90 bp | TTGCATCTTGGGTTCAGGCTTCAAGCGCTGGTGAGGCTGGTGGGGTCTCCAGGGCCTCCTTCTTGCATCTaGGGTTCAGGCTTCAAGCGC | + |
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Preference number: 3 (lower is better) Translates to: LHLGFRLQALVRLVGSPGPPSCI*GSGFKR Trigger: GCGCTTGAAGCCTGAACCCAAGATGCAAGAAGGAGG...CCCTGGAGACCCCACCAGCCTCACCAGCGCTTGAAGCCTGAACCCAAGATGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259607.7 ENST00000378792.1 |
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| 3UTR-3UTR CAA 90 bp | GTTAGGTATAAATCATATTTACAAGGAAGAGGTGGGGTGTACTGGGGAGCCGTAAGCATAGCCTCCTTCTaGCATCTTGGGTTCAGGCTT | + |
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Preference number: 3 (lower is better) Translates to: VRYKSYLQGRGGVYWGAVSIASF*HLGFRL Trigger: AAGCCTGAACCCAAGATGCAAGAAGGAGGCTATGCT...TACGGCTCCCCAGTACACCCCACCTCTTCCTTGTAAATATGATTTATACCTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000259607.7 |
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| CDS-3UTR TCA 90 bp | GTTCAGGCTTCAAGCGCTGGTGAGGCTGGTGGGGTCTCCAGGGCTCCAGGCTGCCCCTTTAGGGGTCTGTaGCCGCTCAGTCCTGTGAGG | + |
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Preference number: 4 (lower is better) Translates to: VQASSAGEAGGVSRAPGCPFRGL*PLSPVR Trigger: CCTCACAGGACTGAGCGGTCACAGACCCCTAAAGGG...GCAGCCTGGAGCCCTGGAGACCCCACCAGCCTCACCAGCGCTTGAAGCCTGAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000378792.1 |
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| CDS-3UTR GCA 90 bp | TGCTCCCTGGGAGACTCTCCCTCCTCGGTCTCTCTGGACCTGGCCTGCTGTGGGCCTGCTTCCGGTAGCTaGGGACAACCTTGGCGGGAA | + |
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Preference number: 4 (lower is better) Translates to: CSLGDSPSSVSLDLACCGPASGS*GQPWRE Trigger: TTCCCGCCAAGGTTGTCCGCAGCTACCGGAAGCAGG...CCCACAGCAGGCCAGGTCCAGAGAGACCGAGGAGGGAGAGTCTCCCAGGGAGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259607.7 |
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| CDS-3UTR CCA 90 bp | GCCTCCTTCTTGCATCTTGGGTTCAGGCTTCAAGCGCTGGTGAGGCTGGTGGGGCCTCCTCGGTCTCTCTaGACCTGGCCTGCTGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: ASFLHLGFRLQALVRLVGPPRSL*TWPAVG Trigger: GCCCACAGCAGGCCAGGTCCAGAGAGACCGAGGAGG...CCCCACCAGCCTCACCAGCGCTTGAAGCCTGAACCCAAGATGCAAGAAGGAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000259607.7 |
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| CDS-3UTR GCA 90 bp | GTGGCTGCTCCAGGGCCCCTGAGCATAGCCTCCTTCTTGCATCTTGGGTTCAGGTCCAGGGCTCCAGGCTaGTCACTGGGCTATGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: VAAPGPLSIASFLHLGFRSRAPG*SLGYGP Trigger: AGGGCCATAGCCCAGTGAGCAGCCTGGAGCCCTGGA...CCTGAACCCAAGATGCAAGAAGGAGGCTATGCTCAGGGGCCCTGGAGCAGCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259607.7 ENST00000378792.1 |
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| CDS-3UTR GCA 90 bp | ACTGGGGAGCCGTATCAGGTCCAGGGTCCTGATGATTCTCCTTCAAGGGGACAGCCAGCATGGGGTGGCTaGTCCAGGGCCCCTGAGCAT | + |
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Preference number: 4 (lower is better) Translates to: TGEPYQVQGPDDSPSRGQPAWGG*SRAPEH Trigger: ATGCTCAGGGGCCCTGGAGCAGCCACCCCATGCTGG...CTGTCCCCTTGAAGGAGAATCATCAGGACCCTGGACCTGATACGGCTCCCCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000259607.7 |
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| CDS-3UTR GCA 90 bp | TCCAGGGCCCCTGAGCATAGCCTCCTTCTTGCATCTTGGGTTCAGGCTTCAAGCCCAGCATGGGGTGGCTaGTCCAGGGCCCCTGAGCAT | + |
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Preference number: 4 (lower is better) Translates to: SRAPEHSLLLASWVQASSPAWGG*SRAPEH Trigger: ATGCTCAGGGGCCCTGGAGCAGCCACCCCATGCTGG...GCTTGAAGCCTGAACCCAAGATGCAAGAAGGAGGCTATGCTCAGGGGCCCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000259607.7 ENST00000378792.1 |
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| CDS-3UTR GCA 90 bp | GCCTCCTTCTTGCATCTTGGGTTCAGGCTTCAAGCGCTGGTGAGGCTGGTGGGGTGCTGCCTCCTCTCATaGTCCCTGGGAGACTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: ASFLHLGFRLQALVRLVGCCLLS*SLGDSP Trigger: GGGAGAGTCTCCCAGGGAGCATGAGAGGAGGCAGCA...CCCCACCAGCCTCACCAGCGCTTGAAGCCTGAACCCAAGATGCAAGAAGGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000259607.7 |
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| CDS-3UTR CCA 90 bp | CCTCCTCTCATGCTCCCTGGGAGACTCTCCCTCCTCGGTCTCTCTGGACCTGGCAGCTGCGGACAACCTTaGCGGGAATCTTCCTTTGGC | + |
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Preference number: 4 (lower is better) Translates to: PPLMLPGRLSLLGLSGPGSCGQP*RESSFG Trigger: GCCAAAGGAAGATTCCCGCCAAGGTTGTCCGCAGCT...GCCAGGTCCAGAGAGACCGAGGAGGGAGAGTCTCCCAGGGAGCATGAGAGGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259607.7 |
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| 3UTR CAA 72 bp | GTGGCTGCTCCAGGGCCCCTGAGCATAGCCTCCTTCTaGCATCTTGGGTTCAGGCTTCAAGCGCTGGTGAGG | + |
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Preference number: 4 (lower is better) Translates to: VAAPGPLSIASF*HLGFRLQALVR Trigger: CCTCACCAGCGCTTGAAGCCTGAACCCAAGATGCAAGAAGGAGGCTATGCTCAGGGGCCCTGGAGCAGCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259607.7 ENST00000378792.1 |
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| CDS-3UTR CCA 90 bp | GTGGCTGCTCCAGGGCCCCTGAGCATAGCCTCCTTCTTGCATCTTGGGTTCAGGCCTCCATCACTGCCTTaGGTCCTGGGGATGCCAAAG | + |
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Preference number: 4 (lower is better) Translates to: VAAPGPLSIASFLHLGFRPPSLP*VLGMPK Trigger: CTTTGGCATCCCCAGGACCCAAGGCAGTGATGGAGG...CCTGAACCCAAGATGCAAGAAGGAGGCTATGCTCAGGGGCCCTGGAGCAGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000259607.7 ENST00000378792.1 |
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| CDS-3UTR CCA 90 bp | TGCTCCCTGGGAGACTCTCCCTCCTCGGTCTCTCTGGACCTGGCCTGCTGTGGGGCGGGAATCTTCCTTTaGCTGTACTTGAGGCAACAG | + |
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Preference number: 4 (lower is better) Translates to: CSLGDSPSSVSLDLACCGAGIFL*LYLRQQ Trigger: CTGTTGCCTCAAGTACAGCCAAAGGAAGATTCCCGC...CCCACAGCAGGCCAGGTCCAGAGAGACCGAGGAGGGAGAGTCTCCCAGGGAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000259607.7 |
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| CDS-3UTR CCA 90 bp | TTGCATCTTGGGTTCAGGCTTCAAGCGCTGGTGAGGCTGGTGGGGTCTCCAGGGTCCTTCCTGCAGCCCTaGGCTGGTTTCTGTGGGGAT | + |
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Preference number: 4 (lower is better) Translates to: LHLGFRLQALVRLVGSPGSFLQP*AGFCGD Trigger: ATCCCCACAGAAACCAGCCCAGGGCTGCAGGAAGGA...CCCTGGAGACCCCACCAGCCTCACCAGCGCTTGAAGCCTGAACCCAAGATGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000259607.7 ENST00000378792.1 |
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| CDS-3UTR TCA 90 bp | GCCTCCTTCTTGCATCTTGGGTTCAGGCTTCAAGCGCTGGTGAGGCTGGTGGGGTCCTTTGGCTGTACTTaGGGCAACAGTCCTGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: ASFLHLGFRLQALVRLVGSFGCT*GNSPEP Trigger: GGGCTCAGGACTGTTGCCTCAAGTACAGCCAAAGGA...CCCCACCAGCCTCACCAGCGCTTGAAGCCTGAACCCAAGATGCAAGAAGGAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259607.7 ENST00000378792.1 |
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| CDS-3UTR TCA 90 bp | TTGCATCTTGGGTTCAGGCTTCAAGCGCTGGTGAGGCTGGTGGGGTCTCCAGGGTCCTTTGGCTGTACTTaGGGCAACAGTCCTGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: LHLGFRLQALVRLVGSPGSFGCT*GNSPEP Trigger: GGGCTCAGGACTGTTGCCTCAAGTACAGCCAAAGGA...CCCTGGAGACCCCACCAGCCTCACCAGCGCTTGAAGCCTGAACCCAAGATGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259607.7 ENST00000378792.1 |
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| CDS-3UTR TCA 90 bp | GCTGCTCCAGGGCCCCTGAGCATAGCCTCCTTCTTGCATCTTGGGTTCAGGCTTCCCTTTAGGGGTCTGTaGCCGCTCAGTCCTCTTGCA | + |
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Preference number: 4 (lower is better) Translates to: AAPGPLSIASFLHLGFRLPFRGL*PLSPLA Trigger: TGCAAGAGGACTGAGCGGTCACAGACCCCTAAAGGG...AAGCCTGAACCCAAGATGCAAGAAGGAGGCTATGCTCAGGGGCCCTGGAGCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000259607.7 |
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| CDS-3UTR GCA 90 bp | GCTGCTCCAGGGCCCCTGAGCATAGCCTCCTTCTTGCATCTTGGGTTCAGGCTTCTTGGGTCCTGGGGATaGCAAAGGCCAGAACCAGGA | + |
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Preference number: 4 (lower is better) Translates to: AAPGPLSIASFLHLGFRLLGSWG*QRPEPG Trigger: TCCTGGTTCTGGCCTTTGGCATCCCCAGGACCCAAG...AAGCCTGAACCCAAGATGCAAGAAGGAGGCTATGCTCAGGGGCCCTGGAGCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000259607.7 ENST00000378792.1 |
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| CDS-3UTR GCA 90 bp | TGCTCCAGGGCCCCTGAGCATAGCCTCCTTCTTGCATCTTGGGTTCAGGCTTCACCTGCTTCCGGTAGCTaGGGACAACCTTGGCGGGAA | + |
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Preference number: 4 (lower is better) Translates to: CSRAPEHSLLLASWVQASPASGS*GQPWRE Trigger: TTCCCGCCAAGGTTGTCCGCAGCTACCGGAAGCAGG...TGAAGCCTGAACCCAAGATGCAAGAAGGAGGCTATGCTCAGGGGCCCTGGAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259607.7 ENST00000378792.1 |
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| CDS-3UTR GCA 90 bp | GCCTCCTTCTTGCATCTTGGGTTCAGGCTTCAAGCGCTGGTGAGGCTGGTGGGGGGTGTCTTGTCCAGATaGTGCATCAGCTGCTGCACC | + |
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Preference number: 4 (lower is better) Translates to: ASFLHLGFRLQALVRLVGGVLSR*CISCCT Trigger: GGTGCAGCAGCTGATGCAGCATCTGGACAAGACACC...CCCCACCAGCCTCACCAGCGCTTGAAGCCTGAACCCAAGATGCAAGAAGGAGGC 59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENST00000259607.7 ENST00000378792.1 |
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| CDS-3UTR CCA 90 bp | GGCTGCTCCAGGGCCCCTGAGCATAGCCTCCTTCTTGCATCTTGGGTTCAGGCTAGCTGCGGACAACCTTaGCGGGAATCTTCCTTTGGC | + |
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Preference number: 4 (lower is better) Translates to: GCSRAPEHSLLLASWVQASCGQP*RESSFG Trigger: GCCAAAGGAAGATTCCCGCCAAGGTTGTCCGCAGCT...AGCCTGAACCCAAGATGCAAGAAGGAGGCTATGCTCAGGGGCCCTGGAGCAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259607.7 ENST00000378792.1 |
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| CDS-3UTR CCA 90 bp | CATAGCCTCCTTCTTGCATCTTGGGTTCAGGCTTCAAGCGCTGGTGAGGCTGGTCGGTCTCTCTGGACCTaGCCTGCTGTGGGCAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: HSLLLASWVQASSAGEAGRSLWT*PAVGSS Trigger: TGAGCTGCCCACAGCAGGCCAGGTCCAGAGAGACCG...ACCAGCCTCACCAGCGCTTGAAGCCTGAACCCAAGATGCAAGAAGGAGGCTATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259607.7 |
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| CDS-3UTR TCA 90 bp | TCCAGGGCCCCTGAGCATAGCCTCCTTCTTGCATCTTGGGTTCAGGCTTCAAGCGAGGCTCAGAGCCAGTaGCTGAGCCATGTCTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: SRAPEHSLLLASWVQASSEAQSQ*LSHVCG Trigger: ACCACAGACATGGCTCAGTCACTGGCTCTGAGCCTC...GCTTGAAGCCTGAACCCAAGATGCAAGAAGGAGGCTATGCTCAGGGGCCCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000259607.7 |
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| CDS-3UTR GCA 90 bp | CTTGCATCTTGGGTTCAGGCTTCAAGCGCTGGTGAGGCTGGTGGGGTCTCCAGGAGATGCTGCATCAGCTaGTGCACCCAGAGCTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: LASWVQASSAGEAGGVSRRCCIS*CTQSSF Trigger: AAAGGAGCTCTGGGTGCAGCAGCTGATGCAGCATCT...CCTGGAGACCCCACCAGCCTCACCAGCGCTTGAAGCCTGAACCCAAGATGCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259607.7 ENST00000378792.1 |
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| CDS-3UTR GCA 90 bp | AGCCTCCTTCTTGCATCTTGGGTTCAGGCTTCAAGCGCTGGTGAGGCTGGTGGGGTCTTGTCCAGATGCTaGATCAGCTGCTGCACCCAG | + |
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Preference number: 4 (lower is better) Translates to: SLLLASWVQASSAGEAGGVLSRC*ISCCTQ Trigger: CTGGGTGCAGCAGCTGATGCAGCATCTGGACAAGAC...CCCACCAGCCTCACCAGCGCTTGAAGCCTGAACCCAAGATGCAAGAAGGAGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259607.7 ENST00000378792.1 |
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| CDS-3UTR GCA 90 bp | GAGCCGTATCAGGTCCAGGGTCCTGATGATTCTCCTTCAAGGGGACAGTCCTGCTGGGCAGCTCAGCCATaGAGGGTAGAGCTGGGAATG | + |
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Preference number: 4 (lower is better) Translates to: EPYQVQGPDDSPSRGQSCWAAQP*RVELGM Trigger: CATTCCCAGCTCTACCCTGCATGGCTGAGCTGCCCA...GCAGGACTGTCCCCTTGAAGGAGAATCATCAGGACCCTGGACCTGATACGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000259607.7 |
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| CDS-3UTR CCA 90 bp | TGCTCCAGGGCCCCTGAGCATAGCCTCCTTCTTGCATCTTGGGTTCAGGCTTCACACTGCCTTGGGTCCTaGGGATGCCAAAGGCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: CSRAPEHSLLLASWVQASHCLGS*GCQRPE Trigger: TTCTGGCCTTTGGCATCCCCAGGACCCAAGGCAGTG...TGAAGCCTGAACCCAAGATGCAAGAAGGAGGCTATGCTCAGGGGCCCTGGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259607.7 ENST00000378792.1 |
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| CDS-3UTR CCA 90 bp | GAGCCGTATCAGGTCCAGGGTCCTGATGATTCTCCTTCAAGGGGACAGTCCTGCTCCTTCCTGCAGCCCTaGGCTGGTTTCTGTGGGGAT | + |
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Preference number: 4 (lower is better) Translates to: EPYQVQGPDDSPSRGQSCSFLQP*AGFCGD Trigger: ATCCCCACAGAAACCAGCCCAGGGCTGCAGGAAGGA...GCAGGACTGTCCCCTTGAAGGAGAATCATCAGGACCCTGGACCTGATACGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000259607.7 |
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| CDS-3UTR CCA 90 bp | AATCATATTTACAAGGAAGAGGTGGGGTGTACTGGGGAGCCGTATCAGGTCCAGGTGGCAAGGCCAGCATaGGGTGGCTGCTCCAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: NHIYKEEVGCTGEPYQVQVARPA*GGCSRA Trigger: GGCCCTGGAGCAGCCACCCCATGCTGGCCTTGCCAC...CTGGACCTGATACGGCTCCCCAGTACACCCCACCTCTTCCTTGTAAATATGATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000259607.7 |
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| CDS-3UTR GCA 90 bp | AGCATAGCCTCCTTCTTGCATCTTGGGTTCAGGCTTCAAGCGCTGGTGAGGCTGCTTGGGTCCTGGGGATaGCAAAGGCCAGAACCAGGA | + |
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Preference number: 4 (lower is better) Translates to: SIASFLHLGFRLQALVRLLGSWG*QRPEPG Trigger: TCCTGGTTCTGGCCTTTGGCATCCCCAGGACCCAAG...CAGCCTCACCAGCGCTTGAAGCCTGAACCCAAGATGCAAGAAGGAGGCTATGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259607.7 ENST00000378792.1 |
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| CDS-3UTR GCA 90 bp | GAGCCGTATCAGGTCCAGGGTCCTGATGATTCTCCTTCAAGGGGACAGTCCTGCGTCTTGTCCAGATGCTaGATCAGCTGCTGCACCCAG | + |
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Preference number: 4 (lower is better) Translates to: EPYQVQGPDDSPSRGQSCVLSRC*ISCCTQ Trigger: CTGGGTGCAGCAGCTGATGCAGCATCTGGACAAGAC...GCAGGACTGTCCCCTTGAAGGAGAATCATCAGGACCCTGGACCTGATACGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000259607.7 |
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| CDS-3UTR CCA 90 bp | ATAGCCTCCTTCTTGCATCTTGGGTTCAGGCTTCAAGCGCTGGTGAGGCTGGTGCCTCCATCACTGCCTTaGGTCCTGGGGATGCCAAAG | + |
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Preference number: 4 (lower is better) Translates to: IASFLHLGFRLQALVRLVPPSLP*VLGMPK Trigger: CTTTGGCATCCCCAGGACCCAAGGCAGTGATGGAGG...CACCAGCCTCACCAGCGCTTGAAGCCTGAACCCAAGATGCAAGAAGGAGGCTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259607.7 ENST00000378792.1 |
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| CDS-3UTR CCA 90 bp | TGGCCTGCTGTGGGCAGCTCAGCCATGCAGGGTAGAGCTGGGAATGCAGATGGGGGAATGCAGATGGGGTaGTTAAAGCAGGAGAAAGAG | + |
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Preference number: 4 (lower is better) Translates to: WPAVGSSAMQGRAGNADGGMQMG*LKQEKE Trigger: CTCTTTCTCCTGCTTTAACCACCCCATCTGCATTCC...CCCATCTGCATTCCCAGCTCTACCCTGCATGGCTGAGCTGCCCACAGCAGGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000259607.7 |
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| CDS-3UTR CCA 90 bp | AGCATAGCCTCCTTCTTGCATCTTGGGTTCAGGCTTCAAGCGCTGGTGAGGCTGAGAGGTGGGGTGTACTaGGGAGCCGTATCAGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: SIASFLHLGFRLQALVRLRGGVY*GAVSGP Trigger: TGGACCTGATACGGCTCCCCAGTACACCCCACCTCT...CAGCCTCACCAGCGCTTGAAGCCTGAACCCAAGATGCAAGAAGGAGGCTATGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000259607.7 |
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| CDS-3UTR GCA 90 bp | AATCATATTTACAAGGAAGAGGTGGGGTGTACTGGGGAGCCGTATCAGGTCCAGTCCAGGGCTCCAGGCTaGTCACTGGGCTATGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: NHIYKEEVGCTGEPYQVQSRAPG*SLGYGP Trigger: AGGGCCATAGCCCAGTGAGCAGCCTGGAGCCCTGGA...CTGGACCTGATACGGCTCCCCAGTACACCCCACCTCTTCCTTGTAAATATGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000259607.7 |
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| CDS-3UTR GCA 90 bp | GCTGCTCCAGGGCCCCTGAGCATAGCCTCCTTCTTGCATCTTGGGTTCAGGCTTAGATTCCTCACCTCTTaGAGCCTTTGGAGCCCTTTC | + |
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Preference number: 4 (lower is better) Translates to: AAPGPLSIASFLHLGFRLRFLTS*SLWSPF Trigger: GAAAGGGCTCCAAAGGCTGCAAGAGGTGAGGAATCT...AAGCCTGAACCCAAGATGCAAGAAGGAGGCTATGCTCAGGGGCCCTGGAGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378792.1 |
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| CDS-3UTR CCA 90 bp | GCTGCTCCAGGGCCCCTGAGCATAGCCTCCTTCTTGCATCTTGGGTTCAGGCTTCTCCTTCTTGCATCTTaGGTTCAGGCTTCAAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: AAPGPLSIASFLHLGFRLLLLAS*VQASSA Trigger: AGCGCTTGAAGCCTGAACCCAAGATGCAAGAAGGAG...AAGCCTGAACCCAAGATGCAAGAAGGAGGCTATGCTCAGGGGCCCTGGAGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259607.7 ENST00000378792.1 |
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| CDS-3UTR CCA 90 bp | ACTGGGGAGCCGTATCAGGTCCAGGGTCCTGATGATTCTCCTTCAAGGGGACAGTGGTTTCTGTGGGGATaGTGTCTTGTCCAGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TGEPYQVQGPDDSPSRGQWFLWG*CLVQML Trigger: CAGCATCTGGACAAGACACCATCCCCACAGAAACCA...CTGTCCCCTTGAAGGAGAATCATCAGGACCCTGGACCTGATACGGCTCCCCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000259607.7 |
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| CDS-3UTR CCA 90 bp | TCCAGGGCCCCTGAGCATAGCCTCCTTCTTGCATCTTGGGTTCAGGCTTCAAGCTCCTCTTGCAGCCTTTaGAGCCCTTTCCTTTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SRAPEHSLLLASWVQASSSSCSL*SPFLSC Trigger: GCAAGAAAGGAAAGGGCTCCAAAGGCTGCAAGAGGA...GCTTGAAGCCTGAACCCAAGATGCAAGAAGGAGGCTATGCTCAGGGGCCCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000259607.7 |
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| CDS-3UTR TCA 90 bp | GTTAGGTATAAATCATATTTACAAGGAAGAGGTGGGGTGTACTGGGGAGCCGTAGGCTTCAAGCGCTGGTaGGGCTGGTGGGGTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VRYKSYLQGRGGVYWGAVGFKRW*GWWGLQ Trigger: CTGGAGACCCCACCAGCCTCACCAGCGCTTGAAGCC...TACGGCTCCCCAGTACACCCCACCTCTTCCTTGTAAATATGATTTATACCTAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000259607.7 |
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| CDS-3UTR CCA 90 bp | AGCATAGCCTCCTTCTTGCATCTTGGGTTCAGGCTTCAAGCGCTGGTGAGGCTGTGGTTTCTGTGGGGATaGTGTCTTGTCCAGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SIASFLHLGFRLQALVRLWFLWG*CLVQML Trigger: CAGCATCTGGACAAGACACCATCCCCACAGAAACCA...CAGCCTCACCAGCGCTTGAAGCCTGAACCCAAGATGCAAGAAGGAGGCTATGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259607.7 ENST00000378792.1 |
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| CDS-3UTR CCA 90 bp | CATAGCCTCCTTCTTGCATCTTGGGTTCAGGCTTCAAGCGCTGGTGAGGCTGGTACCTCTTGCAGCCTTTaGAGCCCTTTCCTTTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: HSLLLASWVQASSAGEAGTSCSL*SPFLSC Trigger: GCAAGAAAGGAAAGGGCTCCAAAGGCTGCAAGAGGT...ACCAGCCTCACCAGCGCTTGAAGCCTGAACCCAAGATGCAAGAAGGAGGCTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378792.1 |
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| CDS-3UTR GCA 90 bp | AATCATATTTACAAGGAAGAGGTGGGGTGTACTGGGGAGCCGTATCAGGTCCAGGGTGTCTTGTCCAGATaGTGCATCAGCTGCTGCACC | + |
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Preference number: 4 (lower is better) Translates to: NHIYKEEVGCTGEPYQVQGVLSR*CISCCT Trigger: GGTGCAGCAGCTGATGCAGCATCTGGACAAGACACC...CTGGACCTGATACGGCTCCCCAGTACACCCCACCTCTTCCTTGTAAATATGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000259607.7 |
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| CDS-3UTR GCA 90 bp | AATCATATTTACAAGGAAGAGGTGGGGTGTACTGGGGAGCCGTATCAGGTCCAGACCGCTCAGTCCTCTTaGAGCCTTTGGAGCCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NHIYKEEVGCTGEPYQVQTAQSS*SLWSPF Trigger: GAAAGGGCTCCAAAGGCTGCAAGAGGACTGAGCGGT...CTGGACCTGATACGGCTCCCCAGTACACCCCACCTCTTCCTTGTAAATATGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000259607.7 |
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| CDS-3UTR CCA 90 bp | GTTAGGTATAAATCATATTTACAAGGAAGAGGTGGGGTGTACTGGGGAGCCGTACACTGCCTTGGGTCCTaGGGATGCCAAAGGCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VRYKSYLQGRGGVYWGAVHCLGS*GCQRPE Trigger: TTCTGGCCTTTGGCATCCCCAGGACCCAAGGCAGTG...TACGGCTCCCCAGTACACCCCACCTCTTCCTTGTAAATATGATTTATACCTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000259607.7 |
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| CDS-3UTR CCA 90 bp | AATCATATTTACAAGGAAGAGGTGGGGTGTACTGGGGAGCCGTATCAGGTCCAGCTCCTTCTTGCATCTTaGGTTCAGGCTTCAAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: NHIYKEEVGCTGEPYQVQLLLAS*VQASSA Trigger: AGCGCTTGAAGCCTGAACCCAAGATGCAAGAAGGAG...CTGGACCTGATACGGCTCCCCAGTACACCCCACCTCTTCCTTGTAAATATGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000259607.7 |
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| CDS-3UTR CAA 90 bp | CAGGCTTCAAGCGCTGGTGAGGCTGGTGGGGTCTCCAGGGCTCCAGGCTGCTCAGACCGCTCAGTCCTCTaGCAGCCTTTGGAGCCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: QASSAGEAGGVSRAPGCSDRSVL*QPLEPF Trigger: AAAGGGCTCCAAAGGCTGCAAGAGGACTGAGCGGTC...TGAGCAGCCTGGAGCCCTGGAGACCCCACCAGCCTCACCAGCGCTTGAAGCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000259607.7 |
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| CDS-3UTR CAA 90 bp | GGCTGCTCCAGGGCCCCTGAGCATAGCCTCCTTCTTGCATCTTGGGTTCAGGCTCCCTCCATCACTGCCTaGGGTCCTGGGGATGCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: GCSRAPEHSLLLASWVQAPSITA*GPGDAK Trigger: TTTGGCATCCCCAGGACCCAAGGCAGTGATGGAGGG...AGCCTGAACCCAAGATGCAAGAAGGAGGCTATGCTCAGGGGCCCTGGAGCAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000259607.7 ENST00000378792.1 |
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| CDS-3UTR CAA 90 bp | TGGCCTGCTGTGGGCAGCTCAGCCATGCAGGGTAGAGCTGGGAATGCAGATGGGGCACCCAGAGCTCCTTaGGGTCTGCACATAGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: WPAVGSSAMQGRAGNADGAPRAP*GLHIAL Trigger: CAGAGCTATGTGCAGACCCAAAGGAGCTCTGGGTGC...CCCATCTGCATTCCCAGCTCTACCCTGCATGGCTGAGCTGCCCACAGCAGGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000259607.7 |
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| CDS-3UTR CAA 90 bp | CTTGCATCTTGGGTTCAGGCTTCAAGCGCTGGTGAGGCTGGTGGGGTCTCCAGGGAGCCCTTTCCTTTCTaGCCAGTCTTGGAGGCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LASWVQASSAGEAGGVSREPFPF*PVLEAP Trigger: GGGGGCCTCCAAGACTGGCAAGAAAGGAAAGGGCTC...CCTGGAGACCCCACCAGCCTCACCAGCGCTTGAAGCCTGAACCCAAGATGCAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259607.7 ENST00000378792.1 |
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| CDS TCA 90 bp | AGCTGCTGCACCCAGAGCTCCTTTGGGTCTGCACATAGCTCTGCCTaGGAGCGCTTGCGGGGCAAGAACAGGATAGCTGGGATGGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SCCTQSSFGSAHSSA*ERLRGKNRIAGMEQ Trigger: CTGCTCCATCCCAGCTATCCTGTTCTTGCCCCGCAAGCGCTCTCAGGCAGAGCTATGTGCAGACCCAAAGGAGCTCTGGGTGCAGCAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259607.7 ENST00000378792.1 |
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| CDS-3UTR CAA 90 bp | AGCCTCCTTCTTGCATCTTGGGTTCAGGCTTCAAGCGCTGGTGAGGCTGGTGGGCCCTCCATCACTGCCTaGGGTCCTGGGGATGCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SLLLASWVQASSAGEAGGPSITA*GPGDAK Trigger: TTTGGCATCCCCAGGACCCAAGGCAGTGATGGAGGG...CCCACCAGCCTCACCAGCGCTTGAAGCCTGAACCCAAGATGCAAGAAGGAGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259607.7 ENST00000378792.1 |
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| CDS TCA 90 bp | GGTAGCTGCGGACAACCTTGGCGGGAATCTTCCTTTGGCTGTACTTaGGGCAACAGTCCTGAGCCCCTCCATCACTGCCTTGGGTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GSCGQPWRESSFGCT*GNSPEPLHHCLGSW Trigger: CCAGGACCCAAGGCAGTGATGGAGGGGCTCAGGACTGTTGCCTCAAGTACAGCCAAAGGAAGATTCCCGCCAAGGTTGTCCGCAGCTACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259607.7 ENST00000378792.1 |
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| CDS GCA 90 bp | CTGCAGCCCTGGGCTGGTTTCTGTGGGGATGGTGTCTTGTCCAGATaGTGCATCAGCTGCTGCACCCAGAGCTCCTTTGGGTCTGCACAT | + |
|
Preference number: 5 (lower is better) Translates to: LQPWAGFCGDGVLSR*CISCCTQSSFGSAH Trigger: ATGTGCAGACCCAAAGGAGCTCTGGGTGCAGCAGCTGATGCAGCATCTGGACAAGACACCATCCCCACAGAAACCAGCCCAGGGCTGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259607.7 ENST00000378792.1 |
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| CDS-3UTR CAA 90 bp | TGCTCCAGGGCCCCTGAGCATAGCCTCCTTCTTGCATCTTGGGTTCAGGCTTCAGAGCCCTTTCCTTTCTaGCCAGTCTTGGAGGCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: CSRAPEHSLLLASWVQASEPFPF*PVLEAP Trigger: GGGGGCCTCCAAGACTGGCAAGAAAGGAAAGGGCTC...TGAAGCCTGAACCCAAGATGCAAGAAGGAGGCTATGCTCAGGGGCCCTGGAGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259607.7 ENST00000378792.1 |
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| CDS-3UTR CAA 90 bp | GCCTCCTTCTTGCATCTTGGGTTCAGGCTTCAAGCGCTGGTGAGGCTGGTGGGGGGCGGGAATCTTCCTTaGGCTGTACTTGAGGCAACA | + |
|
Preference number: 5 (lower is better) Translates to: ASFLHLGFRLQALVRLVGGGNLP*AVLEAT Trigger: TGTTGCCTCAAGTACAGCCAAAGGAAGATTCCCGCC...CCCCACCAGCCTCACCAGCGCTTGAAGCCTGAACCCAAGATGCAAGAAGGAGGC 58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENST00000259607.7 ENST00000378792.1 |
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| CDS-3UTR CAA 90 bp | TCCAGGGCCCCTGAGCATAGCCTCCTTCTTGCATCTTGGGTTCAGGCTTCAAGCTGGAGCAGCCTAAGCTaGGTTCCTGCTTCCGGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: SRAPEHSLLLASWVQASSWSSLS*VPASGS Trigger: GCTACCGGAAGCAGGAACCAAGCTTAGGCTGCTCCA...GCTTGAAGCCTGAACCCAAGATGCAAGAAGGAGGCTATGCTCAGGGGCCCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259607.7 ENST00000378792.1 |
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| CDS-3UTR CAA 90 bp | CCCCTGAGCATAGCCTCCTTCTTGCATCTTGGGTTCAGGCTTCAAGCGCTGGTGGCACCCAGAGCTCCTTaGGGTCTGCACATAGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PLSIASFLHLGFRLQALVAPRAP*GLHIAL Trigger: CAGAGCTATGTGCAGACCCAAAGGAGCTCTGGGTGC...CACCAGCGCTTGAAGCCTGAACCCAAGATGCAAGAAGGAGGCTATGCTCAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259607.7 ENST00000378792.1 |
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| CDS-3UTR CAA 90 bp | AGCCTCCTTCTTGCATCTTGGGTTCAGGCTTCAAGCGCTGGTGAGGCTGGTGGGCCTCCTTCTTGCATCTaGGGTTCAGGCTTCAAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: SLLLASWVQASSAGEAGGPPSCI*GSGFKR Trigger: GCGCTTGAAGCCTGAACCCAAGATGCAAGAAGGAGG...CCCACCAGCCTCACCAGCGCTTGAAGCCTGAACCCAAGATGCAAGAAGGAGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259607.7 ENST00000378792.1 |
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| CDS-3UTR CAA 90 bp | TTGCATCTTGGGTTCAGGCTTCAAGCGCTGGTGAGGCTGGTGGGGTCTCCAGGGCACCTCTTGCAGCCTTaGGAGCCCTTTCCTTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LHLGFRLQALVRLVGSPGHLLQP*EPFPFL Trigger: CAAGAAAGGAAAGGGCTCCAAAGGCTGCAAGAGGTG...CCCTGGAGACCCCACCAGCCTCACCAGCGCTTGAAGCCTGAACCCAAGATGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378792.1 |
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| CDS-3UTR CAA 90 bp | CTTGCATCTTGGGTTCAGGCTTCAAGCGCTGGTGAGGCTGGTGGGGTCTCCAGGCAGATTCCTCACCTCTaGCAGCCTTTGGAGCCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LASWVQASSAGEAGGVSRQIPHL*QPLEPF Trigger: AAAGGGCTCCAAAGGCTGCAAGAGGTGAGGAATCTG...CCTGGAGACCCCACCAGCCTCACCAGCGCTTGAAGCCTGAACCCAAGATGCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378792.1 |
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| CDS-3UTR CAA 90 bp | AGCCTCCTTCTTGCATCTTGGGTTCAGGCTTCAAGCGCTGGTGAGGCTGGTGGGGGCGGGAATCTTCCTTaGGCTGTACTTGAGGCAACA | + |
|
Preference number: 5 (lower is better) Translates to: SLLLASWVQASSAGEAGGGGNLP*AVLEAT Trigger: TGTTGCCTCAAGTACAGCCAAAGGAAGATTCCCGCC...CCCACCAGCCTCACCAGCGCTTGAAGCCTGAACCCAAGATGCAAGAAGGAGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000259607.7 ENST00000378792.1 |
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| CDS-3UTR CAA 90 bp | GCCTCCTTCTTGCATCTTGGGTTCAGGCTTCAAGCGCTGGTGAGGCTGGTGGGGAGCATAGCCTCCTTCTaGCATCTTGGGTTCAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: ASFLHLGFRLQALVRLVGSIASF*HLGFRL Trigger: AAGCCTGAACCCAAGATGCAAGAAGGAGGCTATGCT...CCCCACCAGCCTCACCAGCGCTTGAAGCCTGAACCCAAGATGCAAGAAGGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259607.7 ENST00000378792.1 |
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| CDS-3UTR CAA 90 bp | ATAGCCTCCTTCTTGCATCTTGGGTTCAGGCTTCAAGCGCTGGTGAGGCTGGTGTGTGGGGATGGTGTCTaGTCCAGATGCTGCATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: IASFLHLGFRLQALVRLVCGDGV*SRCCIS Trigger: GCTGATGCAGCATCTGGACAAGACACCATCCCCACA...CACCAGCCTCACCAGCGCTTGAAGCCTGAACCCAAGATGCAAGAAGGAGGCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259607.7 ENST00000378792.1 |
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| CDS-3UTR CAA 90 bp | CATAGCCTCCTTCTTGCATCTTGGGTTCAGGCTTCAAGCGCTGGTGAGGCTGGTTGTGGGGATGGTGTCTaGTCCAGATGCTGCATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: HSLLLASWVQASSAGEAGCGDGV*SRCCIS Trigger: GCTGATGCAGCATCTGGACAAGACACCATCCCCACA...ACCAGCCTCACCAGCGCTTGAAGCCTGAACCCAAGATGCAAGAAGGAGGCTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259607.7 ENST00000378792.1 |
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| CDS-3UTR CAA 90 bp | TATCAGGTCCAGGGTCCTGATGATTCTCCTTCAAGGGGACAGTCCTGCTGCCTCCCTCCTTCTTGCATCTaGGGTTCAGGCTTCAAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: YQVQGPDDSPSRGQSCCLPPSCI*GSGFKR Trigger: GCGCTTGAAGCCTGAACCCAAGATGCAAGAAGGAGG...GAGGCAGCAGGACTGTCCCCTTGAAGGAGAATCATCAGGACCCTGGACCTGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000259607.7 |
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| CDS-3UTR CAA 90 bp | ATAGCCTCCTTCTTGCATCTTGGGTTCAGGCTTCAAGCGCTGGTGAGGCTGGTGGTCCTCTTGCAGCCTTaGGAGCCCTTTCCTTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: IASFLHLGFRLQALVRLVVLLQP*EPFPFL Trigger: CAAGAAAGGAAAGGGCTCCAAAGGCTGCAAGAGGAC...CACCAGCCTCACCAGCGCTTGAAGCCTGAACCCAAGATGCAAGAAGGAGGCTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259607.7 |
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| CDS-3UTR CAA 90 bp | GCTCCAGGGCCCCTGAGCATAGCCTCCTTCTTGCATCTTGGGTTCAGGCTTCAAAGCATAGCCTCCTTCTaGCATCTTGGGTTCAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: APGPLSIASFLHLGFRLQSIASF*HLGFRL Trigger: AAGCCTGAACCCAAGATGCAAGAAGGAGGCTATGCT...TTGAAGCCTGAACCCAAGATGCAAGAAGGAGGCTATGCTCAGGGGCCCTGGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259607.7 ENST00000378792.1 |
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| CDS TCA 72 bp | ACCCAGAGCTCCTTTGGGTCTGCACATAGCTCTGCCTaGGAGCGCTTGCGGGGCAAGAACAGGATAGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: TQSSFGSAHSSA*ERLRGKNRIAG Trigger: CCCAGCTATCCTGTTCTTGCCCCGCAAGCGCTCTCAGGCAGAGCTATGTGCAGACCCAAAGGAGCTCTGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259607.7 ENST00000378792.1 |
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| CDS CAA 72 bp | CCGGTAGCTGCGGACAACCTTGGCGGGAATCTTCCTTaGGCTGTACTTGAGGCAACAGTCCTGAGCCCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PVAADNLGGNLP*AVLEATVLSPS Trigger: GGAGGGGCTCAGGACTGTTGCCTCAAGTACAGCCAAAGGAAGATTCCCGCCAAGGTTGTCCGCAGCTACCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259607.7 ENST00000378792.1 |
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| CDS CAA 90 bp | TTCCTGCTTCCGGTAGCTGCGGACAACCTTGGCGGGAATCTTCCTTaGGCTGTACTTGAGGCAACAGTCCTGAGCCCCTCCATCACTGCC | + |
|
Preference number: 6 (lower is better) Translates to: FLLPVAADNLGGNLP*AVLEATVLSPSITA Trigger: GGCAGTGATGGAGGGGCTCAGGACTGTTGCCTCAAGTACAGCCAAAGGAAGATTCCCGCCAAGGTTGTCCGCAGCTACCGGAAGCAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259607.7 ENST00000378792.1 |
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| CDS CAA 72 bp | ACCCACATCCCTCAGATTCCTCACCTCTTGCAGCCTTaGGAGCCCTTTCCTTTCTTGCCAGTCTTGGAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: THIPQIPHLLQP*EPFPFLPVLEA Trigger: GGCCTCCAAGACTGGCAAGAAAGGAAAGGGCTCCAAAGGCTGCAAGAGGTGAGGAATCTGAGGGATGTGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378792.1 |
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