RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CCDC198 (Homo sapiens)

Ensembl gene IDs: ENSG00000100557

Ensembl transcript IDs: ENST00000216445.8, ENST00000422976.6, ENST00000524996.1, ENST00000526336.1, ENST00000526745.6, ENST00000529860.5, ENST00000530417.6, ENST00000532286.1, ENST00000534126.5, ENST00000534528.5

Found 388 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGCAGCTCTCTCAGCGGTGGGTCAGTCCTGCTGATGTGGGGATTTaGCCCACGGCACAGCGATCTGTGTGTGTGAACAATATTGGAAAT +
Preference number: 1 (lower is better)
Translates to: LQLSQRWVSPADVGI*PTAQRSVCVNNIGN
Trigger: ATTTCCAATATTGTTCACACACACAGATCGCTGTGCCGTGGGCCAAATCCCCACATCAGCAGGACTGACCCACCGCTGAGAGAGCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529860.5
3UTR GCA 90 bp TGCGTCTTAGAAGTTCAAGACCTCCAGAGACATAGCCAGCTTTTCTaGAGCTCTCTCAGCGGTGGGTCAGTCCTGCTGATGTGGGGATTT +
Preference number: 1 (lower is better)
Translates to: CVLEVQDLQRHSQLF*SSLSGGSVLLMWGF
Trigger: AAATCCCCACATCAGCAGGACTGACCCACCGCTGAGAGAGCTGCAGAAAAGCTGGCTATGTCTCTGGAGGTCTTGAACTTCTAAGACGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526745.6
ENST00000529860.5
3UTR CCA 90 bp CGGCACAGCGATCGGGACCTCTGTTCAAGATTTCATCAGGCAACATaGTTAGAAGGTCATGGTCATCATTCCTTGGGGTGCTTTGAAGGG +
Preference number: 1 (lower is better)
Translates to: RHSDRDLCSRFHQAT*LEGHGHHSLGCFEG
Trigger: CCCTTCAAAGCACCCCAAGGAATGATGACCATGACCTTCTAACCATGTTGCCTGATGAAATCTTGAACAGAGGTCCCGATCGCTGTGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526745.6
3UTR CCA 90 bp TGTGGGTTTGCCCGGGACCTCTGTTCAAGATTTCATCAGGCAACATaGTTAGAAGGTCATGGTCATCATTCCTTGGGGTGCTTTGAAGGG +
Preference number: 1 (lower is better)
Translates to: CGFARDLCSRFHQAT*LEGHGHHSLGCFEG
Trigger: CCCTTCAAAGCACCCCAAGGAATGATGACCATGACCTTCTAACCATGTTGCCTGATGAAATCTTGAACAGAGGTCCCGGGCAAACCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529860.5
3UTR CCA 90 bp GGTGAGGTGGCAAATGTCAAAGATGAACCCCAAAGGACCACACTTTaGCACTCATGCCCTTGTGTAGTCCTCTTCTGCATTAACTCCAAG +
Preference number: 1 (lower is better)
Translates to: GEVANVKDEPQRTTL*HSCPCVVLFCINSK
Trigger: CTTGGAGTTAATGCAGAAGAGGACTACACAAGGGCATGAGTGCCAAAGTGTGGTCCTTTGGGGTTCATCTTTGACATTTGCCACCTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216445.8
3UTR TCA 90 bp TGCTTTGTGCATTGTCCTGGCTTCTCGCTGGCTCAGGAGTCTTCCTaGAGTAATTACTCGTGGCAAGTCAATGGGTTCAAGCTTTTGAAG +
Preference number: 1 (lower is better)
Translates to: CFVHCPGFSLAQESS*SNYSWQVNGFKLLK
Trigger: CTTCAAAAGCTTGAACCCATTGACTTGCCACGAGTAATTACTTCAGGAAGACTCCTGAGCCAGCGAGAAGCCAGGACAATGCACAAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529860.5
3UTR TCA 90 bp TGCTTTGTGCATTGTCCTGGCTTCTCGCTGGCTCAGGAGTCTTCCTaGAGTAATTACTCGTGGCAAGTCAATGGGTTCAAGCTTCTAGAA +
Preference number: 1 (lower is better)
Translates to: CFVHCPGFSLAQESS*SNYSWQVNGFKLLE
Trigger: TTCTAGAAGCTTGAACCCATTGACTTGCCACGAGTAATTACTTCAGGAAGACTCCTGAGCCAGCGAGAAGCCAGGACAATGCACAAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526745.6
3UTR GCA 90 bp AGACAATTGCTTTTGGGAGCCCTGGGCTCATATGAGAGAAATCTCTaGAGTGTCCTGCTGAAGAGATCATATGCAGATGCTCTGAGGCTA +
Preference number: 1 (lower is better)
Translates to: RQLLLGALGSYERNL*SVLLKRSYADALRL
Trigger: TAGCCTCAGAGCATCTGCATATGATCTCTTCAGCAGGACACTGCAGAGATTTCTCTCATATGAGCCCAGGGCTCCCAAAAGCAATTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216445.8
3UTR TCA 90 bp TTTCCTCCTCTTGAGACAATTGCTTTTGGGAGCCCTGGGCTCATATaGGAGAAATCTCTGCAGTGTCCTGCTGAAGAGATCATATGCAGA +
Preference number: 1 (lower is better)
Translates to: FPPLETIAFGSPGLI*EKSLQCPAEEIICR
Trigger: TCTGCATATGATCTCTTCAGCAGGACACTGCAGAGATTTCTCTCATATGAGCCCAGGGCTCCCAAAAGCAATTGTCTCAAGAGGAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216445.8
3UTR TCA 90 bp TGCTTTGTGCATTGTCCTGGCTTCTCGCTGGCTCAGGAGTCTTCCTaGAGTAATTACTCGTGGCAAGTCAATGGGTTCAAGCTTCATTTT +
Preference number: 1 (lower is better)
Translates to: CFVHCPGFSLAQESS*SNYSWQVNGFKLHF
Trigger: AAAATGAAGCTTGAACCCATTGACTTGCCACGAGTAATTACTTCAGGAAGACTCCTGAGCCAGCGAGAAGCCAGGACAATGCACAAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
3UTR GCA 90 bp GCAAATGTCAAAGATGAACCCCAAAGGACCACACTTTGGCACTCATaGCCTTGTGTAGTCCTCTTCTGCATTAACTCCAAGCTGGTCTAT +
Preference number: 1 (lower is better)
Translates to: ANVKDEPQRTTLWHS*PCVVLFCINSKLVY
Trigger: ATAGACCAGCTTGGAGTTAATGCAGAAGAGGACTACACAAGGGCATGAGTGCCAAAGTGTGGTCCTTTGGGGTTCATCTTTGACATTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216445.8
3UTR GCA 90 bp CATCAGGCAACATGGTTAGAAGGTCATGGTCATCATTCCTTGGGGTaGTTTGAAGGGTTTTCTTGGCTTTATGGTCCCTTGGACTTTGCT +
Preference number: 1 (lower is better)
Translates to: HQATWLEGHGHHSLG*FEGFSWLYGPLDFA
Trigger: AGCAAAGTCCAAGGGACCATAAAGCCAAGAAAACCCTTCAAAGCACCCCAAGGAATGATGACCATGACCTTCTAACCATGTTGCCTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
3UTR GCA 90 bp CAAAGGACCACACTTTGGCACTCATGCCCTTGTGTAGTCCTCTTCTaGATTAACTCCAAGCTGGTCTATGACTTTAACCAACAGAACATG +
Preference number: 1 (lower is better)
Translates to: QRTTLWHSCPCVVLF*INSKLVYDFNQQNM
Trigger: CATGTTCTGTTGGTTAAAGTCATAGACCAGCTTGGAGTTAATGCAGAAGAGGACTACACAAGGGCATGAGTGCCAAAGTGTGGTCCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216445.8
3UTR GCA 90 bp CTTGTTTCTCCAAGTAGGAGCAGTGTCTCTTTCAGCAGGCAATTTTaGGTCTTAGAAGTTCAAGACCTCCAGAGACATAGCCAGCTTTTC +
Preference number: 1 (lower is better)
Translates to: LVSPSRSSVSFSRQF*VLEVQDLQRHSQLF
Trigger: GAAAAGCTGGCTATGTCTCTGGAGGTCTTGAACTTCTAAGACGCAAAATTGCCTGCTGAAAGAGACACTGCTCCTACTTGGAGAAACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526745.6
ENST00000529860.5
3UTR CCA 90 bp TTCTTTTCTAGTACCTTTGCTTTGTGCATTGTCCTGGCTTCTCGCTaGCTCAGGAGTCTTCCTGAAGTAATTACTCGTGGCAAGTCAATG +
Preference number: 1 (lower is better)
Translates to: FFSSTFALCIVLASR*LRSLPEVITRGKSM
Trigger: CATTGACTTGCCACGAGTAATTACTTCAGGAAGACTCCTGAGCCAGCGAGAAGCCAGGACAATGCACAAAGCAAAGGTACTAGAAAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
3UTR CCA 90 bp TCTTTGAATTTCCGGGACCTCTGTTCAAGATTTCATCAGGCAACATaGTTAGAAGGTCATGGTCATCATTCCTTGGGGTGCTTTGAAGGG +
Preference number: 1 (lower is better)
Translates to: SLNFRDLCSRFHQAT*LEGHGHHSLGCFEG
Trigger: CCCTTCAAAGCACCCCAAGGAATGATGACCATGACCTTCTAACCATGTTGCCTGATGAAATCTTGAACAGAGGTCCCGGAAATTCAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
3UTR TCA 90 bp GGCAACATGGTTAGAAGGTCATGGTCATCATTCCTTGGGGTGCTTTaGAGGGTTTTCTTGGCTTTATGGTCCCTTGGACTTTGCTTATTA +
Preference number: 1 (lower is better)
Translates to: GNMVRRSWSSFLGVL*RVFLALWSLGLCLL
Trigger: TAATAAGCAAAGTCCAAGGGACCATAAAGCCAAGAAAACCCTTCAAAGCACCCCAAGGAATGATGACCATGACCTTCTAACCATGTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
3UTR CCA 90 bp GCCAGCTGTCCTGCTAGGAAGCAGAAATACCATACAAAGAAGACATaGTTTATGCCCTCATGTAGCTCACAGTTCATTAAGCTTGTGGAA +
Preference number: 1 (lower is better)
Translates to: ASCPARKQKYHTKKT*FMPSCSSQFIKLVE
Trigger: TTCCACAAGCTTAATGAACTGTGAGCTACATGAGGGCATAAACCATGTCTTCTTTGTATGGTATTTCTGCTTCCTAGCAGGACAGCTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216445.8
3UTR GCA 90 bp GTCCTGCTAGGAAGCAGAAATACCATACAAAGAAGACATGGTTTATaGCCTCATGTAGCTCACAGTTCATTAAGCTTGTGGAAGTGGGTT +
Preference number: 1 (lower is better)
Translates to: VLLGSRNTIQRRHGL*PHVAHSSLSLWKWV
Trigger: AACCCACTTCCACAAGCTTAATGAACTGTGAGCTACATGAGGGCATAAACCATGTCTTCTTTGTATGGTATTTCTGCTTCCTAGCAGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216445.8
3UTR GCA 90 bp TGGGCCTCTTGTCTTTTACGGATCATTTCCAGCACTTGCATCTTATaGAAATATTGTCTGTTCTCAGAAGTATACATTGGAGTTTGCATT +
Preference number: 1 (lower is better)
Translates to: WASCLLRIISSTCIL*KYCLFSEVYIGVCI
Trigger: AATGCAAACTCCAATGTATACTTCTGAGAACAGACAATATTTGCATAAGATGCAAGTGCTGGAAATGATCCGTAAAAGACAAGAGGCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
3UTR CCA 90 bp AAAAGTAAGAAGACTACTCACAAAGAACTGGGAATAGATATGGCCTaGGACAATCTAATAGCCTTCTGTCCTTGGAAGAAACATGAATTT +
Preference number: 1 (lower is better)
Translates to: KSKKTTHKELGIDMA*DNLIAFCPWKKHEF
Trigger: AAATTCATGTTTCTTCCAAGGACAGAAGGCTATTAGATTGTCCCAGGCCATATCTATTCCCAGTTCTTTGTGAGTAGTCTTCTTACTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216445.8
3UTR-3UTR CCA 90 bp TCTCTCAGCGGTGGGTCAGTCCTGCTGATGTGGGGATTTGGCCCACGGCACAGCGTCCTGGCTTCTCGCTaGCTCAGGAGTCTTCCTGAA +
Preference number: 2 (lower is better)
Translates to: SLSGGSVLLMWGFGPRHSVLASR*LRSLPE
Trigger: TTCAGGAAGACTCCTGAGCCAGCGAGAAGCCAGGAC...GCTGTGCCGTGGGCCAAATCCCCACATCAGCAGGACTGACCCACCGCTGAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526745.6
ENST00000529860.5
3UTR-3UTR CCA 90 bp TTCCCCTGCTCATCTGAGTCAGAGCTGGAACTGTCCCAGAGAAGCTGTCCCTGGGTCCTGGCTTCTCGCTaGCTCAGGAGTCTTCCTGAA +
Preference number: 2 (lower is better)
Translates to: FPCSSESELELSQRSCPWVLASR*LRSLPE
Trigger: TTCAGGAAGACTCCTGAGCCAGCGAGAAGCCAGGAC...CCAGGGACAGCTTCTCTGGGACAGTTCCAGCTCTGACTCAGATGAGCAGGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
3UTR-3UTR CCA 90 bp CTTTTCTGCAGCTCTCTCAGCGGTGGGTCAGTCCTGCTGATGTGGGGATTTGGCCTTTGTGCATTGTCCTaGCTTCTCGCTGGCTCAGGA +
Preference number: 2 (lower is better)
Translates to: LFCSSLSGGSVLLMWGFGLCALS*LLAGSG
Trigger: TCCTGAGCCAGCGAGAAGCCAGGACAATGCACAAAG...GCCAAATCCCCACATCAGCAGGACTGACCCACCGCTGAGAGAGCTGCAGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526745.6
ENST00000529860.5
3UTR-3UTR CCA 90 bp TCTCTCAGCGGTGGGTCAGTCCTGCTGATGTGGGGATTTGGCCCACGGCACAGCTTCTTTAACTCCATTTaGGCCTCTTGTCTTTTACGG +
Preference number: 2 (lower is better)
Translates to: SLSGGSVLLMWGFGPRHSFFNSI*ASCLLR
Trigger: CCGTAAAAGACAAGAGGCCCAAATGGAGTTAAAGAA...GCTGTGCCGTGGGCCAAATCCCCACATCAGCAGGACTGACCCACCGCTGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526745.6
ENST00000529860.5
3UTR-3UTR TCA 90 bp TCTCTCTGTCCTGGTCCTCACCAGTGCTCGTGGCTTCTTCTCATCTTTCCCCTGGCTCAGGAGTCTTCCTaGAGTAATTACTCGTGGCAA +
Preference number: 2 (lower is better)
Translates to: SLCPGPHQCSWLLLIFPLAQESS*SNYSWQ
Trigger: TTGCCACGAGTAATTACTTCAGGAAGACTCCTGAGC...CAGGGGAAAGATGAGAAGAAGCCACGAGCACTGGTGAGGACCAGGACAGAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
3UTR-3UTR CCA 90 bp CTTTTCTGCAGCTCTCTCAGCGGTGGGTCAGTCCTGCTGATGTGGGGATTTGGCATGGTTAGAAGGTCATaGTCATCATTCCTTGGGGTG +
Preference number: 2 (lower is better)
Translates to: LFCSSLSGGSVLLMWGFGMVRRS*SSFLGV
Trigger: CACCCCAAGGAATGATGACCATGACCTTCTAACCAT...GCCAAATCCCCACATCAGCAGGACTGACCCACCGCTGAGAGAGCTGCAGAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000526745.6
ENST00000529860.5
3UTR-3UTR GCA 90 bp TCTCTCAGCGGTGGGTCAGTCCTGCTGATGTGGGGATTTGGCCCACGGCACAGCAGCACTTGCATCTTATaGAAATATTGTCTGTTCTCA +
Preference number: 2 (lower is better)
Translates to: SLSGGSVLLMWGFGPRHSSTCIL*KYCLFS
Trigger: TGAGAACAGACAATATTTGCATAAGATGCAAGTGCT...GCTGTGCCGTGGGCCAAATCCCCACATCAGCAGGACTGACCCACCGCTGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526745.6
ENST00000529860.5
3UTR-3UTR CCA 90 bp GTGAACAATATTGGAAATTTCAACTGTGGGTTTGCCCGGGACCTCTGTTCAAGAGTCCTGGCTTCTCGCTaGCTCAGGAGTCTTCCTGAA +
Preference number: 2 (lower is better)
Translates to: VNNIGNFNCGFARDLCSRVLASR*LRSLPE
Trigger: TTCAGGAAGACTCCTGAGCCAGCGAGAAGCCAGGAC...TCTTGAACAGAGGTCCCGGGCAAACCCACAGTTGAAATTTCCAATATTGTTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529860.5
3UTR-3UTR CCA 90 bp GAATTTCCGGGACCTCTGTTCAAGATTTCATCAGGCAACATGGTTAGAAGGTCAGTCCTGGCTTCTCGCTaGCTCAGGAGTCTTCCTGAA +
Preference number: 2 (lower is better)
Translates to: EFPGPLFKISSGNMVRRSVLASR*LRSLPE
Trigger: TTCAGGAAGACTCCTGAGCCAGCGAGAAGCCAGGAC...TGACCTTCTAACCATGTTGCCTGATGAAATCTTGAACAGAGGTCCCGGAAATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
3UTR CAA 90 bp AAGAAGACTGGCAACTTCTGTTTCCTCCTCTTGAGACAATTGCTTTaGGGAGCCCTGGGCTCATATGAGAGAAATCTCTGCAGTGTCCTG +
Preference number: 2 (lower is better)
Translates to: KKTGNFCFLLLRQLL*GALGSYERNLCSVL
Trigger: CAGGACACTGCAGAGATTTCTCTCATATGAGCCCAGGGCTCCCAAAAGCAATTGTCTCAAGAGGAGGAAACAGAAGTTGCCAGTCTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216445.8
3UTR-3UTR TCA 90 bp TTGATCGAGCGTCTTGTTTCTCCAAGTAGGAGCAGTGTCTCTTTCAGCAGGCAAATGGGTTCAAGCTTTTaGAGTCTTTGGGGTGGATGC +
Preference number: 2 (lower is better)
Translates to: LIERLVSPSRSSVSFSRQMGSSF*SLWGGC
Trigger: GCATCCACCCCAAAGACTTCAAAAGCTTGAACCCAT...TTGCCTGCTGAAAGAGACACTGCTCCTACTTGGAGAAACAAGACGCTCGATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529860.5
3UTR-3UTR GCA 90 bp CTTTTCTGCAGCTCTCTCAGCGGTGGGTCAGTCCTGCTGATGTGGGGATTTGGCAGCACTTGCATCTTATaGAAATATTGTCTGTTCTCA +
Preference number: 2 (lower is better)
Translates to: LFCSSLSGGSVLLMWGFGSTCIL*KYCLFS
Trigger: TGAGAACAGACAATATTTGCATAAGATGCAAGTGCT...GCCAAATCCCCACATCAGCAGGACTGACCCACCGCTGAGAGAGCTGCAGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526745.6
ENST00000529860.5
3UTR-3UTR GCA 90 bp TCGAAAAGTGGGATTCTCTCTGTCCTGGTCCTCACCAGTGCTCGTGGCTTCTTCTGGTCCCTTGGACTTTaGTTATTAATTCTTGCCTCT +
Preference number: 2 (lower is better)
Translates to: SKSGILSVLVLTSARGFFWSLGL*LLILAS
Trigger: AGAGGCAAGAATTAATAAGCAAAGTCCAAGGGACCA...GAAGAAGCCACGAGCACTGGTGAGGACCAGGACAGAGAGAATCCCACTTTTCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
3UTR-3UTR CCA 90 bp CTCCATTTGGGCCTCTTGTCTTTTACGGATCATTTCCAGCACTTGCATCTTATGCTTTGTGCATTGTCCTaGCTTCTCGCTGGCTCAGGA +
Preference number: 2 (lower is better)
Translates to: LHLGLLSFTDHFQHLHLMLCALS*LLAGSG
Trigger: TCCTGAGCCAGCGAGAAGCCAGGACAATGCACAAAG...CATAAGATGCAAGTGCTGGAAATGATCCGTAAAAGACAAGAGGCCCAAATGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
3UTR-3UTR CCA 90 bp AGCGTCTTGTTTCTCCAAGTAGGAGCAGTGTCTCTTTCAGCAGGCAATTTTGCGCTCGTGGCAAGTCAATaGGTTCAAGCTTCTAGAAGT +
Preference number: 2 (lower is better)
Translates to: SVLFLQVGAVSLSAGNFALVASQ*VQASRS
Trigger: ACTTCTAGAAGCTTGAACCCATTGACTTGCCACGAG...CGCAAAATTGCCTGCTGAAAGAGACACTGCTCCTACTTGGAGAAACAAGACGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526745.6
3UTR CAA 90 bp GCTTTTAAGAAGACTGGCAACTTCTGTTTCCTCCTCTTGAGACAATaGCTTTTGGGAGCCCTGGGCTCATATGAGAGAAATCTCTGCAGT +
Preference number: 2 (lower is better)
Translates to: AFKKTGNFCFLLLRQ*LLGALGSYERNLCS
Trigger: ACTGCAGAGATTTCTCTCATATGAGCCCAGGGCTCCCAAAAGCAATTGTCTCAAGAGGAGGAAACAGAAGTTGCCAGTCTTCTTAAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216445.8
3UTR CAA 90 bp AGATTTCATCAGGCAACATGGTTAGAAGGTCATGGTCATCATTCCTaGGGGTGCTTTGAAGGGTTTTCTTGGCTTTATGGTCCCTTGGAC +
Preference number: 2 (lower is better)
Translates to: RFHQATWLEGHGHHS*GCFEGFSWLYGPLD
Trigger: GTCCAAGGGACCATAAAGCCAAGAAAACCCTTCAAAGCACCCCAAGGAATGATGACCATGACCTTCTAACCATGTTGCCTGATGAAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
3UTR-3UTR TCA 90 bp CTGTGGGTTTGCCCGGGACCTCTGTTCAAGATTTCATCAGGCAACATGGTTAGAATTCTTGCCTCTCCATaGAGACTTTTCTTTAACTCC +
Preference number: 2 (lower is better)
Translates to: LWVCPGPLFKISSGNMVRILASP*RLFFNS
Trigger: GGAGTTAAAGAAAAGTCTTCATGGAGAGGCAAGAAT...TCTAACCATGTTGCCTGATGAAATCTTGAACAGAGGTCCCGGGCAAACCCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529860.5
3UTR-3UTR TCA 90 bp GAACAATATTGGAAATTTCAACTGTGGGTTTGCCCGGGACCTCTGTTCAAGATTGCTCAGGAGTCTTCCTaGAGTAATTACTCGTGGCAA +
Preference number: 2 (lower is better)
Translates to: EQYWKFQLWVCPGPLFKIAQESS*SNYSWQ
Trigger: TTGCCACGAGTAATTACTTCAGGAAGACTCCTGAGC...AATCTTGAACAGAGGTCCCGGGCAAACCCACAGTTGAAATTTCCAATATTGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529860.5
3UTR-3UTR GCA 90 bp ACTCCATTTGGGCCTCTTGTCTTTTACGGATCATTTCCAGCACTTGCATCTTATAGTACCTTTGCTTTGTaGATTGTCCTGGCTTCTCGC +
Preference number: 2 (lower is better)
Translates to: TPFGPLVFYGSFPALASYSTFAL*IVLASR
Trigger: GCGAGAAGCCAGGACAATGCACAAAGCAAAGGTACT...ATAAGATGCAAGTGCTGGAAATGATCCGTAAAAGACAAGAGGCCCAAATGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
3UTR-3UTR CCA 90 bp CGTGACATTATCTCACGTGTATCCTGTAGGCTCTCTGTTACGGTTAGCTCACTAAGTGAGACAATAAAATaGCTCTTGGTTAGCCCCTGT +
Preference number: 2 (lower is better)
Translates to: RDIISRVSCRLSVTVSSLSETIK*LLVSPC
Trigger: ACAGGGGCTAACCAAGAGCCATTTTATTGTCTCACT...TAGTGAGCTAACCGTAACAGAGAGCCTACAGGATACACGTGAGATAATGTCACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216445.8
3UTR-3UTR CCA 90 bp CCGGGACCTCTGTTCAAGATTTCATCAGGCAACATGGTTAGAAGGTCATGGTCATTCTTTAACTCCATTTaGGCCTCTTGTCTTTTACGG +
Preference number: 2 (lower is better)
Translates to: PGPLFKISSGNMVRRSWSFFNSI*ASCLLR
Trigger: CCGTAAAAGACAAGAGGCCCAAATGGAGTTAAAGAA...TGACCATGACCTTCTAACCATGTTGCCTGATGAAATCTTGAACAGAGGTCCCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
3UTR-3UTR CCA 90 bp AGATTTCATCAGGCAACATGGTTAGAAGGTCATGGTCATCATTCCTTGGGGTGCGTTTTCTTGGCTTTATaGTCCCTTGGACTTTGCTTA +
Preference number: 2 (lower is better)
Translates to: RFHQATWLEGHGHHSLGCVFLAL*SLGLCL
Trigger: TAAGCAAAGTCCAAGGGACCATAAAGCCAAGAAAAC...GCACCCCAAGGAATGATGACCATGACCTTCTAACCATGTTGCCTGATGAAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
3UTR-3UTR CCA 90 bp AGTAGGAGCAGTGTCTCTTTCAGCAGGCAATTTTGCGTCTTAGAAGTTCAAGACATGGTCATCATTCCTTaGGGTGCTTTGAAGGGTTTT +
Preference number: 2 (lower is better)
Translates to: SRSSVSFSRQFCVLEVQDMVIIP*GALKGF
Trigger: AAAACCCTTCAAAGCACCCCAAGGAATGATGACCAT...GTCTTGAACTTCTAAGACGCAAAATTGCCTGCTGAAAGAGACACTGCTCCTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526745.6
ENST00000529860.5
3UTR-3UTR TCA 90 bp TATTCTTTGAATTTCCGGGACCTCTGTTCAAGATTTCATCAGGCAACATGGTTAGCTCAGGAGTCTTCCTaGAGTAATTACTCGTGGCAA +
Preference number: 2 (lower is better)
Translates to: YSLNFRDLCSRFHQATWLAQESS*SNYSWQ
Trigger: TTGCCACGAGTAATTACTTCAGGAAGACTCCTGAGC...TAACCATGTTGCCTGATGAAATCTTGAACAGAGGTCCCGGAAATTCAAAGAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
3UTR-3UTR GCA 90 bp TTAATGATAAACTCTTTGCCAGCTGTCCTGCTAGGAAGCAGAAATACCATACAAACACTTTGGCACTCATaGCCTTGTGTAGTCCTCTTC +
Preference number: 2 (lower is better)
Translates to: LMINSLPAVLLGSRNTIQTLWHS*PCVVLF
Trigger: GAAGAGGACTACACAAGGGCATGAGTGCCAAAGTGT...TTGTATGGTATTTCTGCTTCCTAGCAGGACAGCTGGCAAAGAGTTTATCATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216445.8
3UTR-3UTR GCA 90 bp TTAATGATAAACTCTTTGCCAGCTGTCCTGCTAGGAAGCAGAAATACCATACAAGTGATCTTGGCTCATTaGAACCTCTATCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: LMINSLPAVLLGSRNTIQVILAH*NLYLLG
Trigger: ACCCAGGAGATAGAGGTTGCAATGAGCCAAGATCAC...TTGTATGGTATTTCTGCTTCCTAGCAGGACAGCTGGCAAAGAGTTTATCATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216445.8
3UTR-3UTR GCA 90 bp TTGTGCATTGTCCTGGCTTCTCGCTGGCTCAGGAGTCTTCCTGAAGTAATTACTAGTCTTTGGGGTGGATaGCTTTTAATAATACTTGTT +
Preference number: 2 (lower is better)
Translates to: LCIVLASRWLRSLPEVITSLWGG*LLIILV
Trigger: AACAAGTATTATTAAAAGGCATCCACCCCAAAGACT...AGTAATTACTTCAGGAAGACTCCTGAGCCAGCGAGAAGCCAGGACAATGCACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529860.5
ENST00000534528.5
3UTR-3UTR GCA 90 bp CCGGGACCTCTGTTCAAGATTTCATCAGGCAACATGGTTAGAAGGTCATGGTCAAGTCTTTGGGGTGGATaGCTTTTAATAATACTTGTT +
Preference number: 2 (lower is better)
Translates to: PGPLFKISSGNMVRRSWSSLWGG*LLIILV
Trigger: AACAAGTATTATTAAAAGGCATCCACCCCAAAGACT...TGACCATGACCTTCTAACCATGTTGCCTGATGAAATCTTGAACAGAGGTCCCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529860.5
ENST00000534528.5
3UTR-3UTR CCA 90 bp TTCAAGATTTCATCAGGCAACATGGTTAGAAGGTCATGGTCATCATTCCTTGGGTTTGAAGGGTTTTCTTaGCTTTATGGTCCCTTGGAC +
Preference number: 2 (lower is better)
Translates to: FKISSGNMVRRSWSSFLGFEGFS*LYGPLD
Trigger: GTCCAAGGGACCATAAAGCCAAGAAAACCCTTCAAA...CCCAAGGAATGATGACCATGACCTTCTAACCATGTTGCCTGATGAAATCTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
3UTR-3UTR TCA 90 bp AGCTGGCTAGTCAAACAATGCATGCTTTCTTTTGGTGGAAATATGCTTCTTACCACGATCTTCTACACGTaGCATTATCTCACGTGTATC +
Preference number: 2 (lower is better)
Translates to: SWLVKQCMLSFGGNMLLTTIFYT*HYLTCI
Trigger: GATACACGTGAGATAATGTCACGTGTAGAAGATCGT...GGTAAGAAGCATATTTCCACCAAAAGAAAGCATGCATTGTTTGACTAGCCAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216445.8
3UTR-3UTR CCA 90 bp ACTCCATTTGGGCCTCTTGTCTTTTACGGATCATTTCCAGCACTTGCATCTTATCTCGTGGCAAGTCAATaGGTTCAAGCTTCATTTTAT +
Preference number: 2 (lower is better)
Translates to: TPFGPLVFYGSFPALASYLVASQ*VQASFY
Trigger: ATAAAATGAAGCTTGAACCCATTGACTTGCCACGAG...ATAAGATGCAAGTGCTGGAAATGATCCGTAAAAGACAAGAGGCCCAAATGGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
3UTR CAA 90 bp TGTAGCTCACAGTTCATTAAGCTTGTGGAAGTGGGTTTCGTGAAATaGAATTTTAAGTCACATAACAGAATGGTGAAGACGTGCCTTTGG +
Preference number: 2 (lower is better)
Translates to: CSSQFIKLVEVGFVK*NFKSHNRMVKTCLW
Trigger: CCAAAGGCACGTCTTCACCATTCTGTTATGTGACTTAAAATTCAATTTCACGAAACCCACTTCCACAAGCTTAATGAACTGTGAGCTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216445.8
3UTR-3UTR TCA 90 bp TCTAGAAAGCTGGCTAGTCAAACAATGCATGCTTTCTTTTGGTGGAAATATGCTCAACCCACAGGAAAGTaGGACAATAAAATGGCTCTT +
Preference number: 2 (lower is better)
Translates to: SRKLASQTMHAFFWWKYAQPTGK*DNKMAL
Trigger: AAGAGCCATTTTATTGTCTCACTTTCCTGTGGGTTG...AGCATATTTCCACCAAAAGAAAGCATGCATTGTTTGACTAGCCAGCTTTCTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216445.8
3UTR-3UTR TCA 90 bp TTCTTTGAATTTCCGGGACCTCTGTTCAAGATTTCATCAGGCAACATGGTTAGAATTCTTGCCTCTCCATaGAGACTTTTCTTTAACTCC +
Preference number: 2 (lower is better)
Translates to: FFEFPGPLFKISSGNMVRILASP*RLFFNS
Trigger: GGAGTTAAAGAAAAGTCTTCATGGAGAGGCAAGAAT...TCTAACCATGTTGCCTGATGAAATCTTGAACAGAGGTCCCGGAAATTCAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
3UTR-3UTR CCA 90 bp TCTAGAAAGCTGGCTAGTCAAACAATGCATGCTTTCTTTTGGTGGAAATATGCTGGAATAGATATGGCCTaGGACAATCTAATAGCCTTC +
Preference number: 2 (lower is better)
Translates to: SRKLASQTMHAFFWWKYAGIDMA*DNLIAF
Trigger: GAAGGCTATTAGATTGTCCCAGGCCATATCTATTCC...AGCATATTTCCACCAAAAGAAAGCATGCATTGTTTGACTAGCCAGCTTTCTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216445.8
3UTR-3UTR CCA 90 bp AGTAGGAGCAGTGTCTCTTTCAGCAGGCAATTTTGCGTCTTAGAAGTTCAAGACTTGAAGTCTTTGGGGTaGATGCCTTTTAATAATACT +
Preference number: 2 (lower is better)
Translates to: SRSSVSFSRQFCVLEVQDLKSLG*MPFNNT
Trigger: AGTATTATTAAAAGGCATCCACCCCAAAGACTTCAA...GTCTTGAACTTCTAAGACGCAAAATTGCCTGCTGAAAGAGACACTGCTCCTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529860.5
3UTR-3UTR TCA 90 bp TATTCTTTGAATTTCCGGGACCTCTGTTCAAGATTTCATCAGGCAACATGGTTAATTCTTGCCTCTCCATaGAGACTTTTCTTTAACTCC +
Preference number: 2 (lower is better)
Translates to: YSLNFRDLCSRFHQATWLILASP*RLFFNS
Trigger: GGAGTTAAAGAAAAGTCTTCATGGAGAGGCAAGAAT...TAACCATGTTGCCTGATGAAATCTTGAACAGAGGTCCCGGAAATTCAAAGAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
3UTR-3UTR CCA 90 bp ACTCCATTTGGGCCTCTTGTCTTTTACGGATCATTTCCAGCACTTGCATCTTATTTGAAGTCTTTGGGGTaGATGCCTTTTAATAATACT +
Preference number: 2 (lower is better)
Translates to: TPFGPLVFYGSFPALASYLKSLG*MPFNNT
Trigger: AGTATTATTAAAAGGCATCCACCCCAAAGACTTCAA...ATAAGATGCAAGTGCTGGAAATGATCCGTAAAAGACAAGAGGCCCAAATGGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000529860.5
ENST00000534528.5
3UTR CCA 72 bp TGCAGCTCTCTCAGCGGTGGGTCAGTCCTGCTGATGTaGGGATTTGGCCCACGGCACAGCGATCGGGACCTC +
Preference number: 3 (lower is better)
Translates to: CSSLSGGSVLLM*GFGPRHSDRDL
Trigger: GAGGTCCCGATCGCTGTGCCGTGGGCCAAATCCCCACATCAGCAGGACTGACCCACCGCTGAGAGAGCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526745.6
3UTR TCA 72 bp TTTTCTGCAGCTCTCTCAGCGGTGGGTCAGTCCTGCTaGTGTGGGGATTTGGCCCACGGCACAGCGATCGGG +
Preference number: 3 (lower is better)
Translates to: FSAALSAVGQSC*CGDLAHGTAIG
Trigger: CCCGATCGCTGTGCCGTGGGCCAAATCCCCACATCAGCAGGACTGACCCACCGCTGAGAGAGCTGCAGAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526745.6
3UTR CCA 72 bp TGCAGCTCTCTCAGCGGTGGGTCAGTCCTGCTGATGTaGGGATTTGGCCCACGGCACAGCGATCTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: CSSLSGGSVLLM*GFGPRHSDLCV
Trigger: CACACACAGATCGCTGTGCCGTGGGCCAAATCCCCACATCAGCAGGACTGACCCACCGCTGAGAGAGCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529860.5
3UTR CCA 72 bp TCTCAGCGGTGGGTCAGTCCTGCTGATGTGGGGATTTaGCCCACGGCACAGCGATCGGGACCTCTGTTCAAG +
Preference number: 3 (lower is better)
Translates to: SQRWVSPADVGI*PTAQRSGPLFK
Trigger: CTTGAACAGAGGTCCCGATCGCTGTGCCGTGGGCCAAATCCCCACATCAGCAGGACTGACCCACCGCTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526745.6
3UTR TCA 72 bp TTTTCTGCAGCTCTCTCAGCGGTGGGTCAGTCCTGCTaGTGTGGGGATTTGGCCCACGGCACAGCGATCTGT +
Preference number: 3 (lower is better)
Translates to: FSAALSAVGQSC*CGDLAHGTAIC
Trigger: ACAGATCGCTGTGCCGTGGGCCAAATCCCCACATCAGCAGGACTGACCCACCGCTGAGAGAGCTGCAGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529860.5
3UTR CCA 72 bp TCTCAGCGGTGGGTCAGTCCTGCTGATGTGGGGATTTaGCCCACGGCACAGCGATCTGTGTGTGTGAACAAT +
Preference number: 3 (lower is better)
Translates to: SQRWVSPADVGI*PTAQRSVCVNN
Trigger: ATTGTTCACACACACAGATCGCTGTGCCGTGGGCCAAATCCCCACATCAGCAGGACTGACCCACCGCTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529860.5
3UTR GCA 72 bp TCTCTGCAGTGTCCTGCTGAAGAGATCATATGCAGATaGTCTGAGGCTACATGGATAGGGGGCAAGGTCCCC +
Preference number: 3 (lower is better)
Translates to: SLQCPAEEIICR*SEATWIGGKVP
Trigger: GGGGACCTTGCCCCCTATCCATGTAGCCTCAGAGCATCTGCATATGATCTCTTCAGCAGGACACTGCAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216445.8
3UTR GCA 72 bp GAAGTTCAAGACCTCCAGAGACATAGCCAGCTTTTCTaGAGCTCTCTCAGCGGTGGGTCAGTCCTGCTGATG +
Preference number: 3 (lower is better)
Translates to: EVQDLQRHSQLF*SSLSGGSVLLM
Trigger: CATCAGCAGGACTGACCCACCGCTGAGAGAGCTGCAGAAAAGCTGGCTATGTCTCTGGAGGTCTTGAACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526745.6
ENST00000529860.5
3UTR-3UTR CAA 90 bp GTTCAAGACCTCCAGAGACATAGCCAGCTTTTCTGCAGCTCTCTCAGCGGTGGGCATGGTCATCATTCCTaGGGGTGCTTTGAAGGGTTT +
Preference number: 3 (lower is better)
Translates to: VQDLQRHSQLFCSSLSGGHGHHS*GCFEGF
Trigger: AAACCCTTCAAAGCACCCCAAGGAATGATGACCATG...CCCACCGCTGAGAGAGCTGCAGAAAAGCTGGCTATGTCTCTGGAGGTCTTGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526745.6
ENST00000529860.5
3UTR CCA 72 bp GCCCGGGACCTCTGTTCAAGATTTCATCAGGCAACATaGTTAGAAGGTCATGGTCATCATTCCTTGGGGTGC +
Preference number: 3 (lower is better)
Translates to: ARDLCSRFHQAT*LEGHGHHSLGC
Trigger: GCACCCCAAGGAATGATGACCATGACCTTCTAACCATGTTGCCTGATGAAATCTTGAACAGAGGTCCCGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529860.5
3UTR TCA 72 bp CATTGTCCTGGCTTCTCGCTGGCTCAGGAGTCTTCCTaGAGTAATTACTCGTGGCAAGTCAATGGGTTCAAG +
Preference number: 3 (lower is better)
Translates to: HCPGFSLAQESS*SNYSWQVNGFK
Trigger: CTTGAACCCATTGACTTGCCACGAGTAATTACTTCAGGAAGACTCCTGAGCCAGCGAGAAGCCAGGACAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000526336.1
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
3UTR GCA 72 bp GAGAAATCTCTGCAGTGTCCTGCTGAAGAGATCATATaGAGATGCTCTGAGGCTACATGGATAGGGGGCAAG +
Preference number: 3 (lower is better)
Translates to: EKSLQCPAEEII*RCSEATWIGGK
Trigger: CTTGCCCCCTATCCATGTAGCCTCAGAGCATCTGCATATGATCTCTTCAGCAGGACACTGCAGAGATTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216445.8
3UTR CCA 72 bp AGTACCTTTGCTTTGTGCATTGTCCTGGCTTCTCGCTaGCTCAGGAGTCTTCCTGAAGTAATTACTCGTGGC +
Preference number: 3 (lower is better)
Translates to: STFALCIVLASR*LRSLPEVITRG
Trigger: GCCACGAGTAATTACTTCAGGAAGACTCCTGAGCCAGCGAGAAGCCAGGACAATGCACAAAGCAAAGGTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
3UTR-3UTR CAA 90 bp AAGTTCAAGACCTCCAGAGACATAGCCAGCTTTTCTGCAGCTCTCTCAGCGGTGCTCCATTTGGGCCTCTaGTCTTTTACGGATCATTTC +
Preference number: 3 (lower is better)
Translates to: KFKTSRDIASFSAALSAVLHLGL*SFTDHF
Trigger: GAAATGATCCGTAAAAGACAAGAGGCCCAAATGGAG...CACCGCTGAGAGAGCTGCAGAAAAGCTGGCTATGTCTCTGGAGGTCTTGAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526745.6
ENST00000529860.5
3UTR-3UTR CAA 90 bp TCTCATCTTTCCCCTGCTCATCTGAGTCAGAGCTGGAACTGTCCCAGAGAAGCTCTCCATTTGGGCCTCTaGTCTTTTACGGATCATTTC +
Preference number: 3 (lower is better)
Translates to: SHLSPAHLSQSWNCPREALHLGL*SFTDHF
Trigger: GAAATGATCCGTAAAAGACAAGAGGCCCAAATGGAG...AGCTTCTCTGGGACAGTTCCAGCTCTGACTCAGATGAGCAGGGGAAAGATGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
3UTR TCA 72 bp CTTGAGACAATTGCTTTTGGGAGCCCTGGGCTCATATaGGAGAAATCTCTGCAGTGTCCTGCTGAAGAGATC +
Preference number: 3 (lower is better)
Translates to: LETIAFGSPGLI*EKSLQCPAEEI
Trigger: GATCTCTTCAGCAGGACACTGCAGAGATTTCTCTCATATGAGCCCAGGGCTCCCAAAAGCAATTGTCTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216445.8
3UTR GCA 72 bp CTTTTGGGAGCCCTGGGCTCATATGAGAGAAATCTCTaGAGTGTCCTGCTGAAGAGATCATATGCAGATGCT +
Preference number: 3 (lower is better)
Translates to: LLGALGSYERNL*SVLLKRSYADA
Trigger: AGCATCTGCATATGATCTCTTCAGCAGGACACTGCAGAGATTTCTCTCATATGAGCCCAGGGCTCCCAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216445.8
3UTR CCA 72 bp TTCCGGGACCTCTGTTCAAGATTTCATCAGGCAACATaGTTAGAAGGTCATGGTCATCATTCCTTGGGGTGC +
Preference number: 3 (lower is better)
Translates to: FRDLCSRFHQAT*LEGHGHHSLGC
Trigger: GCACCCCAAGGAATGATGACCATGACCTTCTAACCATGTTGCCTGATGAAATCTTGAACAGAGGTCCCGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
3UTR CCA 72 bp GATCGGGACCTCTGTTCAAGATTTCATCAGGCAACATaGTTAGAAGGTCATGGTCATCATTCCTTGGGGTGC +
Preference number: 3 (lower is better)
Translates to: DRDLCSRFHQAT*LEGHGHHSLGC
Trigger: GCACCCCAAGGAATGATGACCATGACCTTCTAACCATGTTGCCTGATGAAATCTTGAACAGAGGTCCCGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526745.6
3UTR-3UTR CAA 90 bp GTCCTGGCTTCTCGCTGGCTCAGGAGTCTTCCTGAAGTAATTACTCGTGGCAAGTCTTACTTGAAGTCTTaGGGGTGGATGCCTTTTAAT +
Preference number: 3 (lower is better)
Translates to: VLASRWLRSLPEVITRGKSYLKS*GWMPFN
Trigger: ATTAAAAGGCATCCACCCCAAAGACTTCAAGTAAGA...CTTGCCACGAGTAATTACTTCAGGAAGACTCCTGAGCCAGCGAGAAGCCAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534528.5
3UTR-3UTR CAA 90 bp CCGGGACCTCTGTTCAAGATTTCATCAGGCAACATGGTTAGAAGGTCATGGTCAAATGGGTTCAAGCTTTaGAAGTCTTTGGGGTGGATG +
Preference number: 3 (lower is better)
Translates to: PGPLFKISSGNMVRRSWSNGFKL*KSLGWM
Trigger: CATCCACCCCAAAGACTTCAAAAGCTTGAACCCATT...TGACCATGACCTTCTAACCATGTTGCCTGATGAAATCTTGAACAGAGGTCCCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529860.5
3UTR GCA 72 bp AAAGATGAACCCCAAAGGACCACACTTTGGCACTCATaGCCTTGTGTAGTCCTCTTCTGCATTAACTCCAAG +
Preference number: 3 (lower is better)
Translates to: KDEPQRTTLWHS*PCVVLFCINSK
Trigger: CTTGGAGTTAATGCAGAAGAGGACTACACAAGGGCATGAGTGCCAAAGTGTGGTCCTTTGGGGTTCATCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216445.8
3UTR CCA 72 bp GCAAATGTCAAAGATGAACCCCAAAGGACCACACTTTaGCACTCATGCCCTTGTGTAGTCCTCTTCTGCATT +
Preference number: 3 (lower is better)
Translates to: ANVKDEPQRTTL*HSCPCVVLFCI
Trigger: AATGCAGAAGAGGACTACACAAGGGCATGAGTGCCAAAGTGTGGTCCTTTGGGGTTCATCTTTGACATTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216445.8
3UTR-3UTR CAA 90 bp CGTGACATTATCTCACGTGTATCCTGTAGGCTCTCTGTTACGGTTAGCTCACTAGTTCAAGCAATTCTTTaGCCTCAGCCTTCGCATCAA +
Preference number: 3 (lower is better)
Translates to: RDIISRVSCRLSVTVSSLVQAIL*PQPSHQ
Trigger: TTGATGCGAAGGCTGAGGCAAAAGAATTGCTTGAAC...TAGTGAGCTAACCGTAACAGAGAGCCTACAGGATACACGTGAGATAATGTCACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216445.8
3UTR-3UTR CAA 90 bp AGATTTCATCAGGCAACATGGTTAGAAGGTCATGGTCATCATTCCTTGGGGTGCTCTAGTACCTTTGCTTaGTGCATTGTCCTGGCTTCT +
Preference number: 3 (lower is better)
Translates to: RFHQATWLEGHGHHSLGCSSTFA*CIVLAS
Trigger: AGAAGCCAGGACAATGCACAAAGCAAAGGTACTAGA...GCACCCCAAGGAATGATGACCATGACCTTCTAACCATGTTGCCTGATGAAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
3UTR-3UTR CAA 90 bp CCGGGACCTCTGTTCAAGATTTCATCAGGCAACATGGTTAGAAGGTCATGGTCAATGGTCCCTTGGACTTaGCTTATTAATTCTTGCCTC +
Preference number: 3 (lower is better)
Translates to: PGPLFKISSGNMVRRSWSMVPWT*LINSCL
Trigger: GAGGCAAGAATTAATAAGCAAAGTCCAAGGGACCAT...TGACCATGACCTTCTAACCATGTTGCCTGATGAAATCTTGAACAGAGGTCCCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
3UTR TCA 72 bp CTTTTAAGAAGACTGGCAACTTCTGTTTCCTCCTCTTaGGACAATTGCTTTTGGGAGCCCTGGGCTCATATG +
Preference number: 3 (lower is better)
Translates to: LLRRLATSVSSS*DNCFWEPWAHM
Trigger: CATATGAGCCCAGGGCTCCCAAAAGCAATTGTCTCAAGAGGAGGAAACAGAAGTTGCCAGTCTTCTTAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216445.8
3UTR GCA 72 bp ACATGGTTAGAAGGTCATGGTCATCATTCCTTGGGGTaGTTTGAAGGGTTTTCTTGGCTTTATGGTCCCTTG +
Preference number: 3 (lower is better)
Translates to: TWLEGHGHHSLG*FEGFSWLYGPL
Trigger: CAAGGGACCATAAAGCCAAGAAAACCCTTCAAAGCACCCCAAGGAATGATGACCATGACCTTCTAACCATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
3UTR-3UTR CAA 90 bp TGCATTGTCCTGGCTTCTCGCTGGCTCAGGAGTCTTCCTGAAGTAATTACTCGTTTAAATTCATCTTACTaGAAGTCTTTGGGGTGGATG +
Preference number: 3 (lower is better)
Translates to: CIVLASRWLRSLPEVITRLNSSY*KSLGWM
Trigger: CATCCACCCCAAAGACTTCAAGTAAGATGAATTTAA...ACGAGTAATTACTTCAGGAAGACTCCTGAGCCAGCGAGAAGCCAGGACAATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534528.5
3UTR-3UTR CAA 90 bp GAATTTCCGGGACCTCTGTTCAAGATTTCATCAGGCAACATGGTTAGAAGGTCATCTAGTACCTTTGCTTaGTGCATTGTCCTGGCTTCT +
Preference number: 3 (lower is better)
Translates to: EFPGPLFKISSGNMVRRSSSTFA*CIVLAS
Trigger: AGAAGCCAGGACAATGCACAAAGCAAAGGTACTAGA...TGACCTTCTAACCATGTTGCCTGATGAAATCTTGAACAGAGGTCCCGGAAATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
3UTR-3UTR CAA 90 bp TTTCATCAGGCAACATGGTTAGAAGGTCATGGTCATCATTCCTTGGGGTGCTTTTCTAGTACCTTTGCTTaGTGCATTGTCCTGGCTTCT +
Preference number: 3 (lower is better)
Translates to: FHQATWLEGHGHHSLGCFSSTFA*CIVLAS
Trigger: AGAAGCCAGGACAATGCACAAAGCAAAGGTACTAGA...AAAGCACCCCAAGGAATGATGACCATGACCTTCTAACCATGTTGCCTGATGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
3UTR-3UTR CAA 90 bp AAGATTTCATCAGGCAACATGGTTAGAAGGTCATGGTCATCATTCCTTGGGGTGCTCCATTTGGGCCTCTaGTCTTTTACGGATCATTTC +
Preference number: 3 (lower is better)
Translates to: KISSGNMVRRSWSSFLGVLHLGL*SFTDHF
Trigger: GAAATGATCCGTAAAAGACAAGAGGCCCAAATGGAG...CACCCCAAGGAATGATGACCATGACCTTCTAACCATGTTGCCTGATGAAATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
3UTR-3UTR CAA 90 bp AGATTTCATCAGGCAACATGGTTAGAAGGTCATGGTCATCATTCCTTGGGGTGCATGGTCCCTTGGACTTaGCTTATTAATTCTTGCCTC +
Preference number: 3 (lower is better)
Translates to: RFHQATWLEGHGHHSLGCMVPWT*LINSCL
Trigger: GAGGCAAGAATTAATAAGCAAAGTCCAAGGGACCAT...GCACCCCAAGGAATGATGACCATGACCTTCTAACCATGTTGCCTGATGAAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
3UTR GCA 72 bp ACACTTTGGCACTCATGCCCTTGTGTAGTCCTCTTCTaGATTAACTCCAAGCTGGTCTATGACTTTAACCAA +
Preference number: 3 (lower is better)
Translates to: TLWHSCPCVVLF*INSKLVYDFNQ
Trigger: TTGGTTAAAGTCATAGACCAGCTTGGAGTTAATGCAGAAGAGGACTACACAAGGGCATGAGTGCCAAAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216445.8
3UTR-3UTR CAA 90 bp ACTCCATTTGGGCCTCTTGTCTTTTACGGATCATTTCCAGCACTTGCATCTTATTCTAGTACCTTTGCTTaGTGCATTGTCCTGGCTTCT +
Preference number: 3 (lower is better)
Translates to: TPFGPLVFYGSFPALASYSSTFA*CIVLAS
Trigger: AGAAGCCAGGACAATGCACAAAGCAAAGGTACTAGA...ATAAGATGCAAGTGCTGGAAATGATCCGTAAAAGACAAGAGGCCCAAATGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
3UTR-3UTR CAA 90 bp AAGATTTCATCAGGCAACATGGTTAGAAGGTCATGGTCATCATTCCTTGGGGTGTCTTTTCTAGTACCTTaGCTTTGTGCATTGTCCTGG +
Preference number: 3 (lower is better)
Translates to: KISSGNMVRRSWSSFLGVSFLVP*LCALSW
Trigger: CCAGGACAATGCACAAAGCAAAGGTACTAGAAAAGA...CACCCCAAGGAATGATGACCATGACCTTCTAACCATGTTGCCTGATGAAATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
3UTR-3UTR CAA 90 bp CACAGCGATCGGGACCTCTGTTCAAGATTTCATCAGGCAACATGGTTAGAAGGTGATCATTTCCAGCACTaGCATCTTATGCAAATATTG +
Preference number: 3 (lower is better)
Translates to: HSDRDLCSRFHQATWLEGDHFQH*HLMQIL
Trigger: CAATATTTGCATAAGATGCAAGTGCTGGAAATGATC...ACCTTCTAACCATGTTGCCTGATGAAATCTTGAACAGAGGTCCCGATCGCTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526745.6
3UTR-3UTR CAA 90 bp CCGGGACCTCTGTTCAAGATTTCATCAGGCAACATGGTTAGAAGGTCATGGTCAGATCATTTCCAGCACTaGCATCTTATGCAAATATTG +
Preference number: 3 (lower is better)
Translates to: PGPLFKISSGNMVRRSWSDHFQH*HLMQIL
Trigger: CAATATTTGCATAAGATGCAAGTGCTGGAAATGATC...TGACCATGACCTTCTAACCATGTTGCCTGATGAAATCTTGAACAGAGGTCCCGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
3UTR CCA 72 bp GGTGCTTTGAAGGGTTTTCTTGGCTTTATGGTCCCTTaGACTTTGCTTATTAATTCTTGCCTCTCCATGAAG +
Preference number: 3 (lower is better)
Translates to: GALKGFLGFMVP*TLLINSCLSMK
Trigger: CTTCATGGAGAGGCAAGAATTAATAAGCAAAGTCCAAGGGACCATAAAGCCAAGAAAACCCTTCAAAGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
3UTR-3UTR CAA 90 bp ACTCCATTTGGGCCTCTTGTCTTTTACGGATCATTTCCAGCACTTGCATCTTATTCTTTTCTAGTACCTTaGCTTTGTGCATTGTCCTGG +
Preference number: 3 (lower is better)
Translates to: TPFGPLVFYGSFPALASYSFLVP*LCALSW
Trigger: CCAGGACAATGCACAAAGCAAAGGTACTAGAAAAGA...ATAAGATGCAAGTGCTGGAAATGATCCGTAAAAGACAAGAGGCCCAAATGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
3UTR-3UTR CAA 90 bp TTCAAGATTTCATCAGGCAACATGGTTAGAAGGTCATGGTCATCATTCCTTGGGTCTTTTCTAGTACCTTaGCTTTGTGCATTGTCCTGG +
Preference number: 3 (lower is better)
Translates to: FKISSGNMVRRSWSSFLGSFLVP*LCALSW
Trigger: CCAGGACAATGCACAAAGCAAAGGTACTAGAAAAGA...CCCAAGGAATGATGACCATGACCTTCTAACCATGTTGCCTGATGAAATCTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
3UTR-3UTR CAA 90 bp TTCTTTGAATTTCCGGGACCTCTGTTCAAGATTTCATCAGGCAACATGGTTAGAATTCCTTGGGGTGCTTaGAAGGGTTTTCTTGGCTTT +
Preference number: 3 (lower is better)
Translates to: FFEFPGPLFKISSGNMVRIPWGA*KGFLGF
Trigger: AAAGCCAAGAAAACCCTTCAAAGCACCCCAAGGAAT...TCTAACCATGTTGCCTGATGAAATCTTGAACAGAGGTCCCGGAAATTCAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
3UTR CCA 72 bp AAGACTACTCACAAAGAACTGGGAATAGATATGGCCTaGGACAATCTAATAGCCTTCTGTCCTTGGAAGAAA +
Preference number: 3 (lower is better)
Translates to: KTTHKELGIDMA*DNLIAFCPWKK
Trigger: TTTCTTCCAAGGACAGAAGGCTATTAGATTGTCCCAGGCCATATCTATTCCCAGTTCTTTGTGAGTAGTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216445.8
3UTR CCA 72 bp CCTGCTAGGAAGCAGAAATACCATACAAAGAAGACATaGTTTATGCCCTCATGTAGCTCACAGTTCATTAAG +
Preference number: 3 (lower is better)
Translates to: PARKQKYHTKKT*FMPSCSSQFIK
Trigger: CTTAATGAACTGTGAGCTACATGAGGGCATAAACCATGTCTTCTTTGTATGGTATTTCTGCTTCCTAGCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216445.8
3UTR-3UTR CAA 90 bp CAGTTCATTAAGCTTGTGGAAGTGGGTTTCGTGAAATTGAATTTTAAGTCACATTTGGCACTCATGCCCTaGTGTAGTCCTCTTCTGCAT +
Preference number: 3 (lower is better)
Translates to: QFIKLVEVGFVKLNFKSHLALMP*CSPLLH
Trigger: ATGCAGAAGAGGACTACACAAGGGCATGAGTGCCAA...ATGTGACTTAAAATTCAATTTCACGAAACCCACTTCCACAAGCTTAATGAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216445.8
3UTR-3UTR CAA 90 bp CCTGCTAGGAAGCAGAAATACCATACAAAGAAGACATGGTTTATGCCCTCATGTGCATTGAATGTCAAATaGAAGTGGTGTTTTCCTCTA +
Preference number: 3 (lower is better)
Translates to: PARKQKYHTKKTWFMPSCALNVK*KWCFPL
Trigger: TAGAGGAAAACACCACTTCAATTTGACATTCAATGC...ACATGAGGGCATAAACCATGTCTTCTTTGTATGGTATTTCTGCTTCCTAGCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216445.8
3UTR TCA 72 bp ACAGAACATGGTGGAAGTGATGCAAAGTCAGTTCTATaGCTAGCTTTTAAGAAGACTGGCAACTTCTGTTTC +
Preference number: 3 (lower is better)
Translates to: TEHGGSDAKSVL*LAFKKTGNFCF
Trigger: GAAACAGAAGTTGCCAGTCTTCTTAAAAGCTAGTCATAGAACTGACTTTGCATCACTTCCACCATGTTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216445.8
3UTR-3UTR CAA 90 bp CATTTTGCCAATTTTCCAGGGACAGTAGTTATTCACTGCTTGATGTTTCAAAAAATTCCTTGGGGTGCTTaGAAGGGTTTTCTTGGCTTT +
Preference number: 3 (lower is better)
Translates to: HFANFPGTVVIHCLMFQKIPWGA*KGFLGF
Trigger: AAAGCCAAGAAAACCCTTCAAAGCACCCCAAGGAAT...TTTTTGAAACATCAAGCAGTGAATAACTACTGTCCCTGGAAAATTGGCAAAATG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
3UTR-3UTR CAA 90 bp CATTTTGCCAATTTTCCAGGGACAGTAGTTATTCACTGCTTGATGTTTCAAAAAATGGTCCCTTGGACTTaGCTTATTAATTCTTGCCTC +
Preference number: 3 (lower is better)
Translates to: HFANFPGTVVIHCLMFQKMVPWT*LINSCL
Trigger: GAGGCAAGAATTAATAAGCAAAGTCCAAGGGACCAT...TTTTTGAAACATCAAGCAGTGAATAACTACTGTCCCTGGAAAATTGGCAAAATG
38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
3UTR-3UTR CAA 90 bp CAGTTCATTAAGCTTGTGGAAGTGGGTTTCGTGAAATTGAATTTTAAGTCACATATGAATAGGTTGGATTaGTTTATCCTCTCAAGGATC +
Preference number: 3 (lower is better)
Translates to: QFIKLVEVGFVKLNFKSHMNRLD*FILSRI
Trigger: GATCCTTGAGAGGATAAACAAATCCAACCTATTCAT...ATGTGACTTAAAATTCAATTTCACGAAACCCACTTCCACAAGCTTAATGAACTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR TCA 90 bp CTGCAGCTCTCTCAGCGGTGGGTCAGTCCTGCTGATGTGGGGATTTGGCCCACGGTGGGTCAGTCCTGCTaGTGTGGGGATTTGGCCCAC +
Preference number: 4 (lower is better)
Translates to: LQLSQRWVSPADVGIWPTVGQSC*CGDLAH
Trigger: GTGGGCCAAATCCCCACATCAGCAGGACTGACCCAC...CGTGGGCCAAATCCCCACATCAGCAGGACTGACCCACCGCTGAGAGAGCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526745.6
ENST00000529860.5
CDS-3UTR CCA 90 bp CTGCAGCTCTCTCAGCGGTGGGTCAGTCCTGCTGATGTGGGGATTTGGCCCACGCAGCTCTCTCAGCGGTaGGTCAGTCCTGCTGATGTG +
Preference number: 4 (lower is better)
Translates to: LQLSQRWVSPADVGIWPTQLSQR*VSPADV
Trigger: CACATCAGCAGGACTGACCCACCGCTGAGAGAGCTG...CGTGGGCCAAATCCCCACATCAGCAGGACTGACCCACCGCTGAGAGAGCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526745.6
ENST00000529860.5
CDS-3UTR GCA 90 bp CTGCAGCTCTCTCAGCGGTGGGTCAGTCCTGCTGATGTGGGGATTTGGCCCACGAGTACCTTTGCTTTGTaGATTGTCCTGGCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: LQLSQRWVSPADVGIWPTSTFAL*IVLASR
Trigger: GCGAGAAGCCAGGACAATGCACAAAGCAAAGGTACT...CGTGGGCCAAATCCCCACATCAGCAGGACTGACCCACCGCTGAGAGAGCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526745.6
ENST00000529860.5
CDS-3UTR CCA 90 bp CAGCTCTCTCAGCGGTGGGTCAGTCCTGCTGATGTGGGGATTTGGCCCACGGCACTCGTGGCAAGTCAATaGGTTCAAGCTTCTAGAAGT +
Preference number: 4 (lower is better)
Translates to: QLSQRWVSPADVGIWPTALVASQ*VQASRS
Trigger: ACTTCTAGAAGCTTGAACCCATTGACTTGCCACGAG...TGCCGTGGGCCAAATCCCCACATCAGCAGGACTGACCCACCGCTGAGAGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526745.6
CDS-3UTR CCA 90 bp GTTCAAGACCTCCAGAGACATAGCCAGCTTTTCTGCAGCTCTCTCAGCGGTGGGCTTTGTGCATTGTCCTaGCTTCTCGCTGGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: VQDLQRHSQLFCSSLSGGLCALS*LLAGSG
Trigger: TCCTGAGCCAGCGAGAAGCCAGGACAATGCACAAAG...CCCACCGCTGAGAGAGCTGCAGAAAAGCTGGCTATGTCTCTGGAGGTCTTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526745.6
ENST00000529860.5
CDS-3UTR CCA 90 bp CAGGCAACATGGTTAGAAGGTCATGGTCATCATTCCTTGGGGTGCTTTGAAGGGGCTGATGTGGGGATTTaGCCCACGGCACAGCGATCG +
Preference number: 4 (lower is better)
Translates to: QATWLEGHGHHSLGCFEGADVGI*PTAQRS
Trigger: CGATCGCTGTGCCGTGGGCCAAATCCCCACATCAGC...CCCTTCAAAGCACCCCAAGGAATGATGACCATGACCTTCTAACCATGTTGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000526745.6
CDS-3UTR CCA 90 bp ATTGTCCTGGCTTCTCGCTGGCTCAGGAGTCTTCCTGAAGTAATTACTCGTGGCTCAGTCCTGCTGATGTaGGGATTTGGCCCACGGCAC +
Preference number: 4 (lower is better)
Translates to: IVLASRWLRSLPEVITRGSVLLM*GFGPRH
Trigger: GTGCCGTGGGCCAAATCCCCACATCAGCAGGACTGA...GCCACGAGTAATTACTTCAGGAAGACTCCTGAGCCAGCGAGAAGCCAGGACAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526745.6
ENST00000529860.5
CDS-3UTR TCA 90 bp TGGCTCAGGAGTCTTCCTGAAGTAATTACTCGTGGCAAGTCAATGGGTTCAAGCGTGGGTCAGTCCTGCTaGTGTGGGGATTTGGCCCAC +
Preference number: 4 (lower is better)
Translates to: WLRSLPEVITRGKSMGSSVGQSC*CGDLAH
Trigger: GTGGGCCAAATCCCCACATCAGCAGGACTGACCCAC...GCTTGAACCCATTGACTTGCCACGAGTAATTACTTCAGGAAGACTCCTGAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526745.6
ENST00000529860.5
CDS-3UTR GCA 90 bp CTCTCTCAGCGGTGGGTCAGTCCTGCTGATGTGGGGATTTGGCCCACGGCACAGTGGTCCCTTGGACTTTaGTTATTAATTCTTGCCTCT +
Preference number: 4 (lower is better)
Translates to: LSQRWVSPADVGIWPTAQWSLGL*LLILAS
Trigger: AGAGGCAAGAATTAATAAGCAAAGTCCAAGGGACCA...CTGTGCCGTGGGCCAAATCCCCACATCAGCAGGACTGACCCACCGCTGAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526745.6
ENST00000529860.5
CDS-3UTR GCA 90 bp CTGGCTTCTCGCTGGCTCAGGAGTCTTCCTGAAGTAATTACTCGTGGCAAGTCACCTGGTCCTCACCAGTaGTCGTGGCTTCTTCTCATC +
Preference number: 4 (lower is better)
Translates to: LASRWLRSLPEVITRGKSPGPHQ*SWLLLI
Trigger: GATGAGAAGAAGCCACGAGCACTGGTGAGGACCAGG...TGACTTGCCACGAGTAATTACTTCAGGAAGACTCCTGAGCCAGCGAGAAGCCAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
CDS-3UTR GCA 90 bp CTGCAGCTCTCTCAGCGGTGGGTCAGTCCTGCTGATGTGGGGATTTGGCCCACGTTCAGCAGGCAATTTTaGGTCTTAGAAGTTCAAGAC +
Preference number: 4 (lower is better)
Translates to: LQLSQRWVSPADVGIWPTFSRQF*VLEVQD
Trigger: GTCTTGAACTTCTAAGACGCAAAATTGCCTGCTGAA...CGTGGGCCAAATCCCCACATCAGCAGGACTGACCCACCGCTGAGAGAGCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526745.6
ENST00000529860.5
CDS-3UTR CCA 90 bp TGCATTGTCCTGGCTTCTCGCTGGCTCAGGAGTCTTCCTGAAGTAATTACTCGTGCTGATGTGGGGATTTaGCCCACGGCACAGCGATCT +
Preference number: 4 (lower is better)
Translates to: CIVLASRWLRSLPEVITRADVGI*PTAQRS
Trigger: AGATCGCTGTGCCGTGGGCCAAATCCCCACATCAGC...ACGAGTAATTACTTCAGGAAGACTCCTGAGCCAGCGAGAAGCCAGGACAATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529860.5
CDS-3UTR TCA 90 bp CTTTTCTGCAGCTCTCTCAGCGGTGGGTCAGTCCTGCTGATGTGGGGATTTGGCCAGGCCCATTTCATGTaGAAGACATTCAGAGGAAAG +
Preference number: 4 (lower is better)
Translates to: LFCSSLSGGSVLLMWGFGQAHFM*KTFRGK
Trigger: CTTTCCTCTGAATGTCTTTCACATGAAATGGGCCTG...GCCAAATCCCCACATCAGCAGGACTGACCCACCGCTGAGAGAGCTGCAGAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526745.6
ENST00000529860.5
CDS-3UTR GCA 90 bp CTGCAGCTCTCTCAGCGGTGGGTCAGTCCTGCTGATGTGGGGATTTGGCCCACGTTTGTTTTGCAAAGGTaGTACTTTGATCACCCTAAG +
Preference number: 4 (lower is better)
Translates to: LQLSQRWVSPADVGIWPTFVLQR*YFDHPK
Trigger: CTTAGGGTGATCAAAGTAGCACCTTTGCAAAACAAA...CGTGGGCCAAATCCCCACATCAGCAGGACTGACCCACCGCTGAGAGAGCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526745.6
ENST00000529860.5
CDS-3UTR GCA 90 bp CAGGCAACATGGTTAGAAGGTCATGGTCATCATTCCTTGGGGTGCTTTGAAGGGCATAGCCAGCTTTTCTaGAGCTCTCTCAGCGGTGGG +
Preference number: 4 (lower is better)
Translates to: QATWLEGHGHHSLGCFEGHSQLF*SSLSGG
Trigger: CCCACCGCTGAGAGAGCTGCAGAAAAGCTGGCTATG...CCCTTCAAAGCACCCCAAGGAATGATGACCATGACCTTCTAACCATGTTGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526745.6
ENST00000529860.5
CDS-3UTR CCA 90 bp TCATCTTTCCCCTGCTCATCTGAGTCAGAGCTGGAACTGTCCCAGAGAAGCTGTCCTCACCAGTGCTCGTaGCTTCTTCTCATCTTTCCC +
Preference number: 4 (lower is better)
Translates to: SSFPCSSESELELSQRSCPHQCS*LLLIFP
Trigger: GGGAAAGATGAGAAGAAGCCACGAGCACTGGTGAGG...ACAGCTTCTCTGGGACAGTTCCAGCTCTGACTCAGATGAGCAGGGGAAAGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
CDS-3UTR TCA 90 bp TCTCTCTGTCCTGGTCCTCACCAGTGCTCGTGGCTTCTTCTCATCTTTCCCCTGCTTCCAAATTCTGATTaGATGCAAAGTCCACACGGC +
Preference number: 4 (lower is better)
Translates to: SLCPGPHQCSWLLLIFPLLPNSD*MQSPHG
Trigger: GCCGTGTGGACTTTGCATTCAATCAGAATTTGGAAG...CAGGGGAAAGATGAGAAGAAGCCACGAGCACTGGTGAGGACCAGGACAGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
CDS-3UTR GCA 90 bp TTCCCCTGCTCATCTGAGTCAGAGCTGGAACTGTCCCAGAGAAGCTGTCCCTGGGCTTTATTCTGGTCCTaGAGTCTTGCCAGTGAATAT +
Preference number: 4 (lower is better)
Translates to: FPCSSESELELSQRSCPWALFWS*SLASEY
Trigger: ATATTCACTGGCAAGACTGCAGGACCAGAATAAAGC...CCAGGGACAGCTTCTCTGGGACAGTTCCAGCTCTGACTCAGATGAGCAGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
CDS-3UTR GCA 90 bp TCGAAAAGTGGGATTCTCTCTGTCCTGGTCCTCACCAGTGCTCGTGGCTTCTTCTGTAAAGGTGGCAGCTaGCCTTCCAAGGCTTTATTC +
Preference number: 4 (lower is better)
Translates to: SKSGILSVLVLTSARGFFCKGGS*PSKALF
Trigger: GAATAAAGCCTTGGAAGGGCAGCTGCCACCTTTACA...GAAGAAGCCACGAGCACTGGTGAGGACCAGGACAGAGAGAATCCCACTTTTCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
CDS-3UTR GCA 90 bp GTCCTGGCTTCTCGCTGGCTCAGGAGTCTTCCTGAAGTAATTACTCGTGGCAAGAGTACCTTTGCTTTGTaGATTGTCCTGGCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: VLASRWLRSLPEVITRGKSTFAL*IVLASR
Trigger: GCGAGAAGCCAGGACAATGCACAAAGCAAAGGTACT...CTTGCCACGAGTAATTACTTCAGGAAGACTCCTGAGCCAGCGAGAAGCCAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CCA 90 bp AAGACTGGCAACTTCTGTTTCCTCCTCTTGAGACAATTGCTTTTGGGAGCCCTGGTCCTGGCTTCTCGCTaGCTCAGGAGTCTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: KTGNFCFLLLRQLLLGALVLASR*LRSLPE
Trigger: TTCAGGAAGACTCCTGAGCCAGCGAGAAGCCAGGAC...CAGGGCTCCCAAAAGCAATTGTCTCAAGAGGAGGAAACAGAAGTTGCCAGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR CCA 90 bp CCGGGACCTCTGTTCAAGATTTCATCAGGCAACATGGTTAGAAGGTCATGGTCAGTCCTGGCTTCTCGCTaGCTCAGGAGTCTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: PGPLFKISSGNMVRRSWSVLASR*LRSLPE
Trigger: TTCAGGAAGACTCCTGAGCCAGCGAGAAGCCAGGAC...TGACCATGACCTTCTAACCATGTTGCCTGATGAAATCTTGAACAGAGGTCCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CCA 90 bp CTGGCTTCTCGCTGGCTCAGGAGTCTTCCTGAAGTAATTACTCGTGGCAAGTCATGGAAATTTCAACTGTaGGTTTGCCCGGGACCTCTG +
Preference number: 4 (lower is better)
Translates to: LASRWLRSLPEVITRGKSWKFQL*VCPGPL
Trigger: CAGAGGTCCCGGGCAAACCCACAGTTGAAATTTCCA...TGACTTGCCACGAGTAATTACTTCAGGAAGACTCCTGAGCCAGCGAGAAGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529860.5
CDS-3UTR GCA 90 bp CCTGAAGCATATGACTGTTTTCACTATAAGACATCAATTGTGGCCAGGCGCGGTTTGGGAGGCGAAGTTTaGGGTGAGCCGAGATCATGC +
Preference number: 4 (lower is better)
Translates to: PEAYDCFHYKTSIVARRGLGGEV*GEPRSC
Trigger: GCATGATCTCGGCTCACCGCAAACTTCGCCTCCCAA...ACCGCGCCTGGCCACAATTGATGTCTTATAGTGAAAACAGTCATATGCTTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524996.1
CDS-3UTR CCA 90 bp GTCCTGGCTTCTCGCTGGCTCAGGAGTCTTCCTGAAGTAATTACTCGTGGCAAGCTCGTGGCAAGTCAATaGGTTCAAGCTTCTAGAAGT +
Preference number: 4 (lower is better)
Translates to: VLASRWLRSLPEVITRGKLVASQ*VQASRS
Trigger: ACTTCTAGAAGCTTGAACCCATTGACTTGCCACGAG...CTTGCCACGAGTAATTACTTCAGGAAGACTCCTGAGCCAGCGAGAAGCCAGGAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526336.1
ENST00000526745.6
CDS-3UTR CCA 90 bp AGTAGGAGCAGTGTCTCTTTCAGCAGGCAATTTTGCGTCTTAGAAGTTCAAGACTCAGTCCTGCTGATGTaGGGATTTGGCCCACGGCAC +
Preference number: 4 (lower is better)
Translates to: SRSSVSFSRQFCVLEVQDSVLLM*GFGPRH
Trigger: GTGCCGTGGGCCAAATCCCCACATCAGCAGGACTGA...GTCTTGAACTTCTAAGACGCAAAATTGCCTGCTGAAAGAGACACTGCTCCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526745.6
ENST00000529860.5
CDS-3UTR CCA 90 bp AATTACTCGTGGCAAGTCAATGGGTTCAAGCTTTTGAAGTCTTTGGGGTGGATGCAGCTCTCTCAGCGGTaGGTCAGTCCTGCTGATGTG +
Preference number: 4 (lower is better)
Translates to: NYSWQVNGFKLLKSLGWMQLSQR*VSPADV
Trigger: CACATCAGCAGGACTGACCCACCGCTGAGAGAGCTG...CATCCACCCCAAAGACTTCAAAAGCTTGAACCCATTGACTTGCCACGAGTAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529860.5
CDS-3UTR TCA 90 bp CTGGCTTCTCGCTGGCTCAGGAGTCTTCCTGAAGTAATTACTCGTGGCAAGTCACTTCCAAATTCTGATTaGATGCAAAGTCCACACGGC +
Preference number: 4 (lower is better)
Translates to: LASRWLRSLPEVITRGKSLPNSD*MQSPHG
Trigger: GCCGTGTGGACTTTGCATTCAATCAGAATTTGGAAG...TGACTTGCCACGAGTAATTACTTCAGGAAGACTCCTGAGCCAGCGAGAAGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000526336.1
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR TCA 90 bp ATTGTCCTGGCTTCTCGCTGGCTCAGGAGTCTTCCTGAAGTAATTACTCGTGGCTGGGCCTCTTGTTCATaGAGCCATGTTTCCATTTTG +
Preference number: 4 (lower is better)
Translates to: IVLASRWLRSLPEVITRGWASCS*SHVSIL
Trigger: CAAAATGGAAACATGGCTTCATGAACAAGAGGCCCA...GCCACGAGTAATTACTTCAGGAAGACTCCTGAGCCAGCGAGAAGCCAGGACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
CDS-3UTR GCA 90 bp CTGTGGGTTTGCCCGGGACCTCTGTTCAAGATTTCATCAGGCAACATGGTTAGATGTAAAGGTGGCAGCTaGCCTTCCAAGGCTTTATTC +
Preference number: 4 (lower is better)
Translates to: LWVCPGPLFKISSGNMVRCKGGS*PSKALF
Trigger: GAATAAAGCCTTGGAAGGGCAGCTGCCACCTTTACA...TCTAACCATGTTGCCTGATGAAATCTTGAACAGAGGTCCCGGGCAAACCCACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529860.5
CDS-3UTR GCA 90 bp AAGACTGGCAACTTCTGTTTCCTCCTCTTGAGACAATTGCTTTTGGGAGCCCTGACCTGCTTTGCTTTGTaGATTGTCCTGGCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: KTGNFCFLLLRQLLLGALTCFAL*IVLASR
Trigger: GCGAGAAGCCAGGACAATGCACAAAGCAAAGCAGGT...CAGGGCTCCCAAAAGCAATTGTCTCAAGAGGAGGAAACAGAAGTTGCCAGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR GCA 90 bp TGCATTGTCCTGGCTTCTCGCTGGCTCAGGAGTCTTCCTGAAGTAATTACTCGTAGTACCTTTGCTTTGTaGATTGTCCTGGCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: CIVLASRWLRSLPEVITRSTFAL*IVLASR
Trigger: GCGAGAAGCCAGGACAATGCACAAAGCAAAGGTACT...ACGAGTAATTACTTCAGGAAGACTCCTGAGCCAGCGAGAAGCCAGGACAATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR GCA 90 bp AATTACTCGTGGCAAGTCAATGGGTTCAAGCTTTTGAAGTCTTTGGGGTGGATGCATAGCCAGCTTTTCTaGAGCTCTCTCAGCGGTGGG +
Preference number: 4 (lower is better)
Translates to: NYSWQVNGFKLLKSLGWMHSQLF*SSLSGG
Trigger: CCCACCGCTGAGAGAGCTGCAGAAAAGCTGGCTATG...CATCCACCCCAAAGACTTCAAAAGCTTGAACCCATTGACTTGCCACGAGTAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529860.5
CDS-3UTR CCA 90 bp TTTCATCAGGCAACATGGTTAGAAGGTCATGGTCATCATTCCTTGGGGTGCTTTGTCCTGGCTTCTCGCTaGCTCAGGAGTCTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: FHQATWLEGHGHHSLGCFVLASR*LRSLPE
Trigger: TTCAGGAAGACTCCTGAGCCAGCGAGAAGCCAGGAC...AAAGCACCCCAAGGAATGATGACCATGACCTTCTAACCATGTTGCCTGATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CCA 90 bp AATTCTTTTGCCTCAGCCTTCGCATCAAGTAGCTGGGATTACAGACGAATGCCACTTTGTGCATTGTCCTaGCTTCTCGCTGGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: NSFASAFASSSWDYRRMPLCALS*LLAGSG
Trigger: TCCTGAGCCAGCGAGAAGCCAGGACAATGCACAAAG...TGGCATTCGTCTGTAATCCCAGCTACTTGATGCGAAGGCTGAGGCAAAAGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR CCA 90 bp CTCAGGAGTCTTCCTGAAGTAATTACTCGTGGCAAGTCAATGGGTTCAAGCTTCCTTTGTGCATTGTCCTaGCTTCTCGCTGGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: LRSLPEVITRGKSMGSSFLCALS*LLAGSG
Trigger: TCCTGAGCCAGCGAGAAGCCAGGACAATGCACAAAG...GAAGCTTGAACCCATTGACTTGCCACGAGTAATTACTTCAGGAAGACTCCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526745.6
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CCA 90 bp CTGGCTTCTCGCTGGCTCAGGAGTCTTCCTGAAGTAATTACTCGTGGCAAGTCAATGGTTAGAAGGTCATaGTCATCATTCCTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: LASRWLRSLPEVITRGKSMVRRS*SSFLGV
Trigger: CACCCCAAGGAATGATGACCATGACCTTCTAACCAT...TGACTTGCCACGAGTAATTACTTCAGGAAGACTCCTGAGCCAGCGAGAAGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CCA 90 bp AAGACTGGCAACTTCTGTTTCCTCCTCTTGAGACAATTGCTTTTGGGAGCCCTGCATCTGAGTCAGAGCTaGAACTGTCCCAGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: KTGNFCFLLLRQLLLGALHLSQS*NCPREA
Trigger: AGCTTCTCTGGGACAGTTCCAGCTCTGACTCAGATG...CAGGGCTCCCAAAAGCAATTGTCTCAAGAGGAGGAAACAGAAGTTGCCAGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216445.8
3UTR CAA 72 bp GGCAACTTCTGTTTCCTCCTCTTGAGACAATTGCTTTaGGGAGCCCTGGGCTCATATGAGAGAAATCTCTGC +
Preference number: 4 (lower is better)
Translates to: GNFCFLLLRQLL*GALGSYERNLC
Trigger: GCAGAGATTTCTCTCATATGAGCCCAGGGCTCCCAAAAGCAATTGTCTCAAGAGGAGGAAACAGAAGTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216445.8
3UTR CAA 72 bp GCTGGAACTGTCCCAGAGAAGCTGTCCCTGGGCCTCTaGTTCATGAAGCCATGTTTCCATTTTGCCAATTTT +
Preference number: 4 (lower is better)
Translates to: AGTVPEKLSLGL*FMKPCFHFANF
Trigger: AAAATTGGCAAAATGGAAACATGGCTTCATGAACAAGAGGCCCAGGGACAGCTTCTCTGGGACAGTTCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
CDS-3UTR TCA 90 bp CAGGCAACATGGTTAGAAGGTCATGGTCATCATTCCTTGGGGTGCTTTGAAGGGCAGGCCCATTTCATGTaGAAGACATTCAGAGGAAAG +
Preference number: 4 (lower is better)
Translates to: QATWLEGHGHHSLGCFEGQAHFM*KTFRGK
Trigger: CTTTCCTCTGAATGTCTTTCACATGAAATGGGCCTG...CCCTTCAAAGCACCCCAAGGAATGATGACCATGACCTTCTAACCATGTTGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR TCA 90 bp TGCATTGTCCTGGCTTCTCGCTGGCTCAGGAGTCTTCCTGAAGTAATTACTCGTCTTCCAAATTCTGATTaGATGCAAAGTCCACACGGC +
Preference number: 4 (lower is better)
Translates to: CIVLASRWLRSLPEVITRLPNSD*MQSPHG
Trigger: GCCGTGTGGACTTTGCATTCAATCAGAATTTGGAAG...ACGAGTAATTACTTCAGGAAGACTCCTGAGCCAGCGAGAAGCCAGGACAATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000526336.1
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR TCA 90 bp TGGCTCAGGAGTCTTCCTGAAGTAATTACTCGTGGCAAGTCAATGGGTTCAAGCGCTCAGGAGTCTTCCTaGAGTAATTACTCGTGGCAA +
Preference number: 4 (lower is better)
Translates to: WLRSLPEVITRGKSMGSSAQESS*SNYSWQ
Trigger: TTGCCACGAGTAATTACTTCAGGAAGACTCCTGAGC...GCTTGAACCCATTGACTTGCCACGAGTAATTACTTCAGGAAGACTCCTGAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000526336.1
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR TCA 90 bp TCGAAAAGTGGGATTCTCTCTGTCCTGGTCCTCACCAGTGCTCGTGGCTTCTTCATTCTTGCCTCTCCATaGAGACTTTTCTTTAACTCC +
Preference number: 4 (lower is better)
Translates to: SKSGILSVLVLTSARGFFILASP*RLFFNS
Trigger: GGAGTTAAAGAAAAGTCTTCATGGAGAGGCAAGAAT...GAAGAAGCCACGAGCACTGGTGAGGACCAGGACAGAGAGAATCCCACTTTTCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
CDS-3UTR TCA 90 bp GAAGCATATGACTGTTTTCACTATAAGACATCAATTGTGGCCAGGCGCGGTGGCGGCAGGAGAATCATTTaGACTTGGGAGGCGAAGTTT +
Preference number: 4 (lower is better)
Translates to: EAYDCFHYKTSIVARRGGGRRII*TWEAKF
Trigger: AAACTTCGCCTCCCAAGTTCAAATGATTCTCCTGCC...GCCACCGCGCCTGGCCACAATTGATGTCTTATAGTGAAAACAGTCATATGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524996.1
CDS-3UTR GCA 90 bp TGGCTCAGGAGTCTTCCTGAAGTAATTACTCGTGGCAAGTCAATGGGTTCAAGCTGTAAAGGTGGCAGCTaGCCTTCCAAGGCTTTATTC +
Preference number: 4 (lower is better)
Translates to: WLRSLPEVITRGKSMGSSCKGGS*PSKALF
Trigger: GAATAAAGCCTTGGAAGGGCAGCTGCCACCTTTACA...GCTTGAACCCATTGACTTGCCACGAGTAATTACTTCAGGAAGACTCCTGAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000526336.1
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR GCA 90 bp TTCCCCTGCTCATCTGAGTCAGAGCTGGAACTGTCCCAGAGAAGCTGTCCCTGGAGTCTTTGGGGTGGATaGCTTTTAATAATACTTGTT +
Preference number: 4 (lower is better)
Translates to: FPCSSESELELSQRSCPWSLWGG*LLIILV
Trigger: AACAAGTATTATTAAAAGGCATCCACCCCAAAGACT...CCAGGGACAGCTTCTCTGGGACAGTTCCAGCTCTGACTCAGATGAGCAGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
CDS-3UTR GCA 90 bp CCTGCTAGGAAGCAGAAATACCATACAAAGAAGACATGGTTTATGCCCTCATGTCCTGGTCCTCACCAGTaGTCGTGGCTTCTTCTCATC +
Preference number: 4 (lower is better)
Translates to: PARKQKYHTKKTWFMPSCPGPHQ*SWLLLI
Trigger: GATGAGAAGAAGCCACGAGCACTGGTGAGGACCAGG...ACATGAGGGCATAAACCATGTCTTCTTTGTATGGTATTTCTGCTTCCTAGCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR GCA 90 bp AAGACTGGCAACTTCTGTTTCCTCCTCTTGAGACAATTGCTTTTGGGAGCCCTGACACTTTGGCACTCATaGCCTTGTGTAGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: KTGNFCFLLLRQLLLGALTLWHS*PCVVLF
Trigger: GAAGAGGACTACACAAGGGCATGAGTGCCAAAGTGT...CAGGGCTCCCAAAAGCAATTGTCTCAAGAGGAGGAAACAGAAGTTGCCAGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR GCA 90 bp GTCCTGGCTTCTCGCTGGCTCAGGAGTCTTCCTGAAGTAATTACTCGTGGCAAGTTCAGCAGGCAATTTTaGGTCTTAGAAGTTCAAGAC +
Preference number: 4 (lower is better)
Translates to: VLASRWLRSLPEVITRGKFSRQF*VLEVQD
Trigger: GTCTTGAACTTCTAAGACGCAAAATTGCCTGCTGAA...CTTGCCACGAGTAATTACTTCAGGAAGACTCCTGAGCCAGCGAGAAGCCAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526745.6
ENST00000529860.5
CDS-3UTR CCA 90 bp AAGATTTCATCAGGCAACATGGTTAGAAGGTCATGGTCATCATTCCTTGGGGTGCTTTGTGCATTGTCCTaGCTTCTCGCTGGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: KISSGNMVRRSWSSFLGVLCALS*LLAGSG
Trigger: TCCTGAGCCAGCGAGAAGCCAGGACAATGCACAAAG...CACCCCAAGGAATGATGACCATGACCTTCTAACCATGTTGCCTGATGAAATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CCA 90 bp ATTGTCCTGGCTTCTCGCTGGCTCAGGAGTCTTCCTGAAGTAATTACTCGTGGCATGGTCATCATTCCTTaGGGTGCTTTGAAGGGTTTT +
Preference number: 4 (lower is better)
Translates to: IVLASRWLRSLPEVITRGMVIIP*GALKGF
Trigger: AAAACCCTTCAAAGCACCCCAAGGAATGATGACCAT...GCCACGAGTAATTACTTCAGGAAGACTCCTGAGCCAGCGAGAAGCCAGGACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CCA 90 bp AGATTTCATCAGGCAACATGGTTAGAAGGTCATGGTCATCATTCCTTGGGGTGCCATCTGAGTCAGAGCTaGAACTGTCCCAGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: RFHQATWLEGHGHHSLGCHLSQS*NCPREA
Trigger: AGCTTCTCTGGGACAGTTCCAGCTCTGACTCAGATG...GCACCCCAAGGAATGATGACCATGACCTTCTAACCATGTTGCCTGATGAAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CCA 90 bp CCTTGTGTAGTCCTCTTCTGCATTAACTCCAAGCTGGTCTATGACTTTAACCAAGGATTCTCTCTGTCCTaGTCCTCACCAGTGCTCGTG +
Preference number: 4 (lower is better)
Translates to: PCVVLFCINSKLVYDFNQGFSLS*SSPVLV
Trigger: CACGAGCACTGGTGAGGACCAGGACAGAGAGAATCC...TTGGTTAAAGTCATAGACCAGCTTGGAGTTAATGCAGAAGAGGACTACACAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR CCA 90 bp TCATCTTTCCCCTGCTCATCTGAGTCAGAGCTGGAACTGTCCCAGAGAAGCTGTAAACTCATCGAAAAGTaGGATTCTCTCTGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: SSFPCSSESELELSQRSCKLIEK*DSLCPG
Trigger: ACCAGGACAGAGAGAATCCCACTTTTCGATGAGTTT...ACAGCTTCTCTGGGACAGTTCCAGCTCTGACTCAGATGAGCAGGGGAAAGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
CDS-3UTR GCA 90 bp GTCCTGGCTTCTCGCTGGCTCAGGAGTCTTCCTGAAGTAATTACTCGTGGCAAGTTTGTTTTGCAAAGGTaGTACTTTGATCACCCTAAG +
Preference number: 4 (lower is better)
Translates to: VLASRWLRSLPEVITRGKFVLQR*YFDHPK
Trigger: CTTAGGGTGATCAAAGTAGCACCTTTGCAAAACAAA...CTTGCCACGAGTAATTACTTCAGGAAGACTCCTGAGCCAGCGAGAAGCCAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000526336.1
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR GCA 90 bp ATTGTCCTGGCTTCTCGCTGGCTCAGGAGTCTTCCTGAAGTAATTACTCGTGGCTGGTCCCTTGGACTTTaGTTATTAATTCTTGCCTCT +
Preference number: 4 (lower is better)
Translates to: IVLASRWLRSLPEVITRGWSLGL*LLILAS
Trigger: AGAGGCAAGAATTAATAAGCAAAGTCCAAGGGACCA...GCCACGAGTAATTACTTCAGGAAGACTCCTGAGCCAGCGAGAAGCCAGGACAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CCA 90 bp CTGTTCAAGATTTCATCAGGCAACATGGTTAGAAGGTCATGGTCATCATTCCTTGTCCTGGCTTCTCGCTaGCTCAGGAGTCTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: LFKISSGNMVRRSWSSFLVLASR*LRSLPE
Trigger: TTCAGGAAGACTCCTGAGCCAGCGAGAAGCCAGGAC...AAGGAATGATGACCATGACCTTCTAACCATGTTGCCTGATGAAATCTTGAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CCA 90 bp CTGGCTTCTCGCTGGCTCAGGAGTCTTCCTGAAGTAATTACTCGTGGCAAGTCAGTTTTCTTGGCTTTATaGTCCCTTGGACTTTGCTTA +
Preference number: 4 (lower is better)
Translates to: LASRWLRSLPEVITRGKSVFLAL*SLGLCL
Trigger: TAAGCAAAGTCCAAGGGACCATAAAGCCAAGAAAAC...TGACTTGCCACGAGTAATTACTTCAGGAAGACTCCTGAGCCAGCGAGAAGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CCA 90 bp TGCATTGTCCTGGCTTCTCGCTGGCTCAGGAGTCTTCCTGAAGTAATTACTCGTTTTGAAGGGTTTTCTTaGCTTTATGGTCCCTTGGAC +
Preference number: 4 (lower is better)
Translates to: CIVLASRWLRSLPEVITRFEGFS*LYGPLD
Trigger: GTCCAAGGGACCATAAAGCCAAGAAAACCCTTCAAA...ACGAGTAATTACTTCAGGAAGACTCCTGAGCCAGCGAGAAGCCAGGACAATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CCA 90 bp TGCATTGTCCTGGCTTCTCGCTGGCTCAGGAGTCTTCCTGAAGTAATTACTCGTATGGTCATCATTCCTTaGGGTGCTTTGAAGGGTTTT +
Preference number: 4 (lower is better)
Translates to: CIVLASRWLRSLPEVITRMVIIP*GALKGF
Trigger: AAAACCCTTCAAAGCACCCCAAGGAATGATGACCAT...ACGAGTAATTACTTCAGGAAGACTCCTGAGCCAGCGAGAAGCCAGGACAATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CCA 90 bp CCGGGACCTCTGTTCAAGATTTCATCAGGCAACATGGTTAGAAGGTCATGGTCAATGGTTAGAAGGTCATaGTCATCATTCCTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: PGPLFKISSGNMVRRSWSMVRRS*SSFLGV
Trigger: CACCCCAAGGAATGATGACCATGACCTTCTAACCAT...TGACCATGACCTTCTAACCATGTTGCCTGATGAAATCTTGAACAGAGGTCCCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CCA 90 bp CTGGCTTCTCGCTGGCTCAGGAGTCTTCCTGAAGTAATTACTCGTGGCAAGTCATTTCATCAGGCAACATaGTTAGAAGGTCATGGTCAT +
Preference number: 4 (lower is better)
Translates to: LASRWLRSLPEVITRGKSFHQAT*LEGHGH
Trigger: ATGACCATGACCTTCTAACCATGTTGCCTGATGAAA...TGACTTGCCACGAGTAATTACTTCAGGAAGACTCCTGAGCCAGCGAGAAGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CCA 90 bp CCTGCTAGGAAGCAGAAATACCATACAAAGAAGACATGGTTTATGCCCTCATGTCCTCACCAGTGCTCGTaGCTTCTTCTCATCTTTCCC +
Preference number: 4 (lower is better)
Translates to: PARKQKYHTKKTWFMPSCPHQCS*LLLIFP
Trigger: GGGAAAGATGAGAAGAAGCCACGAGCACTGGTGAGG...ACATGAGGGCATAAACCATGTCTTCTTTGTATGGTATTTCTGCTTCCTAGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR CCA 90 bp TTCTTTGAATTTCCGGGACCTCTGTTCAAGATTTCATCAGGCAACATGGTTAGAGGATTCTCTCTGTCCTaGTCCTCACCAGTGCTCGTG +
Preference number: 4 (lower is better)
Translates to: FFEFPGPLFKISSGNMVRGFSLS*SSPVLV
Trigger: CACGAGCACTGGTGAGGACCAGGACAGAGAGAATCC...TCTAACCATGTTGCCTGATGAAATCTTGAACAGAGGTCCCGGAAATTCAAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
CDS-3UTR TCA 90 bp AATTACTCGTGGCAAGTCAATGGGTTCAAGCTTTTGAAGTCTTTGGGGTGGATGATGGGTTCAAGCTTTTaGAGTCTTTGGGGTGGATGC +
Preference number: 4 (lower is better)
Translates to: NYSWQVNGFKLLKSLGWMMGSSF*SLWGGC
Trigger: GCATCCACCCCAAAGACTTCAAAAGCTTGAACCCAT...CATCCACCCCAAAGACTTCAAAAGCTTGAACCCATTGACTTGCCACGAGTAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000529860.5
CDS-3UTR TCA 90 bp AAGATTTCATCAGGCAACATGGTTAGAAGGTCATGGTCATCATTCCTTGGGGTGGCTCAGGAGTCTTCCTaGAGTAATTACTCGTGGCAA +
Preference number: 4 (lower is better)
Translates to: KISSGNMVRRSWSSFLGVAQESS*SNYSWQ
Trigger: TTGCCACGAGTAATTACTTCAGGAAGACTCCTGAGC...CACCCCAAGGAATGATGACCATGACCTTCTAACCATGTTGCCTGATGAAATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR TCA 90 bp GAATTTCCGGGACCTCTGTTCAAGATTTCATCAGGCAACATGGTTAGAAGGTCAGCTCAGGAGTCTTCCTaGAGTAATTACTCGTGGCAA +
Preference number: 4 (lower is better)
Translates to: EFPGPLFKISSGNMVRRSAQESS*SNYSWQ
Trigger: TTGCCACGAGTAATTACTTCAGGAAGACTCCTGAGC...TGACCTTCTAACCATGTTGCCTGATGAAATCTTGAACAGAGGTCCCGGAAATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
CDS-3UTR TCA 90 bp CAGGCAACATGGTTAGAAGGTCATGGTCATCATTCCTTGGGGTGCTTTGAAGGGATTCTTGCCTCTCCATaGAGACTTTTCTTTAACTCC +
Preference number: 4 (lower is better)
Translates to: QATWLEGHGHHSLGCFEGILASP*RLFFNS
Trigger: GGAGTTAAAGAAAAGTCTTCATGGAGAGGCAAGAAT...CCCTTCAAAGCACCCCAAGGAATGATGACCATGACCTTCTAACCATGTTGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR TCA 90 bp TGCATTGTCCTGGCTTCTCGCTGGCTCAGGAGTCTTCCTGAAGTAATTACTCGTATTCTTGCCTCTCCATaGAGACTTTTCTTTAACTCC +
Preference number: 4 (lower is better)
Translates to: CIVLASRWLRSLPEVITRILASP*RLFFNS
Trigger: GGAGTTAAAGAAAAGTCTTCATGGAGAGGCAAGAAT...ACGAGTAATTACTTCAGGAAGACTCCTGAGCCAGCGAGAAGCCAGGACAATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR TCA 90 bp CGTGACATTATCTCACGTGTATCCTGTAGGCTCTCTGTTACGGTTAGCTCACTATGGGCCTCTTGTTCATaGAGCCATGTTTCCATTTTG +
Preference number: 4 (lower is better)
Translates to: RDIISRVSCRLSVTVSSLWASCS*SHVSIL
Trigger: CAAAATGGAAACATGGCTTCATGAACAAGAGGCCCA...TAGTGAGCTAACCGTAACAGAGAGCCTACAGGATACACGTGAGATAATGTCACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR GCA 90 bp CCGGGACCTCTGTTCAAGATTTCATCAGGCAACATGGTTAGAAGGTCATGGTCAGCTTTATTCTGGTCCTaGAGTCTTGCCAGTGAATAT +
Preference number: 4 (lower is better)
Translates to: PGPLFKISSGNMVRRSWSALFWS*SLASEY
Trigger: ATATTCACTGGCAAGACTGCAGGACCAGAATAAAGC...TGACCATGACCTTCTAACCATGTTGCCTGATGAAATCTTGAACAGAGGTCCCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR GCA 90 bp TATTCTTTGAATTTCCGGGACCTCTGTTCAAGATTTCATCAGGCAACATGGTTACCTGGTCCTCACCAGTaGTCGTGGCTTCTTCTCATC +
Preference number: 4 (lower is better)
Translates to: YSLNFRDLCSRFHQATWLPGPHQ*SWLLLI
Trigger: GATGAGAAGAAGCCACGAGCACTGGTGAGGACCAGG...TAACCATGTTGCCTGATGAAATCTTGAACAGAGGTCCCGGAAATTCAAAGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CCA 90 bp AAGATTTCATCAGGCAACATGGTTAGAAGGTCATGGTCATCATTCCTTGGGGTGTCCAAGGCTTTATTCTaGTCCTGCAGTCTTGCCAGT +
Preference number: 4 (lower is better)
Translates to: KISSGNMVRRSWSSFLGVSKALF*SCSLAS
Trigger: ACTGGCAAGACTGCAGGACCAGAATAAAGCCTTGGA...CACCCCAAGGAATGATGACCATGACCTTCTAACCATGTTGCCTGATGAAATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CCA 90 bp AATTCTTTTGCCTCAGCCTTCGCATCAAGTAGCTGGGATTACAGACGAATGCCACTCGTGGCAAGTCAATaGGTTCAAGCTTTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: NSFASAFASSSWDYRRMPLVASQ*VQAFEV
Trigger: GACTTCAAAAGCTTGAACCCATTGACTTGCCACGAG...TGGCATTCGTCTGTAATCCCAGCTACTTGATGCGAAGGCTGAGGCAAAAGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR CCA 90 bp TTCAGCAGGCAATTTTGCGTCTTAGAAGTTCAAGACCTCCAGAGACATAGCCAGCTCGTGGCAAGTCAATaGGTTCAAGCTTTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: FSRQFCVLEVQDLQRHSQLVASQ*VQAFEV
Trigger: GACTTCAAAAGCTTGAACCCATTGACTTGCCACGAG...CTGGCTATGTCTCTGGAGGTCTTGAACTTCTAAGACGCAAAATTGCCTGCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529860.5
CDS-3UTR CCA 90 bp AGTAATTACTCGTGGCAAGTCAATGGGTTCAAGCTTCTAGAAGTTCAACGTTTAGTCCTGGCTTCTCGCTaGCTCAGGAGTCTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: SNYSWQVNGFKLLEVQRLVLASR*LRSLPE
Trigger: TTCAGGAAGACTCCTGAGCCAGCGAGAAGCCAGGAC...TAAACGTTGAACTTCTAGAAGCTTGAACCCATTGACTTGCCACGAGTAATTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526336.1
ENST00000526745.6
CDS-3UTR CCA 90 bp TGCATTGTCCTGGCTTCTCGCTGGCTCAGGAGTCTTCCTGAAGTAATTACTCGTTTCTTTAACTCCATTTaGGCCTCTTGTCTTTTACGG +
Preference number: 4 (lower is better)
Translates to: CIVLASRWLRSLPEVITRFFNSI*ASCLLR
Trigger: CCGTAAAAGACAAGAGGCCCAAATGGAGTTAAAGAA...ACGAGTAATTACTTCAGGAAGACTCCTGAGCCAGCGAGAAGCCAGGACAATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CCA 90 bp CACAGCGATCGGGACCTCTGTTCAAGATTTCATCAGGCAACATGGTTAGAAGGTTTTGAAGGGTTTTCTTaGCTTTATGGTCCCTTGGAC +
Preference number: 4 (lower is better)
Translates to: HSDRDLCSRFHQATWLEGFEGFS*LYGPLD
Trigger: GTCCAAGGGACCATAAAGCCAAGAAAACCCTTCAAA...ACCTTCTAACCATGTTGCCTGATGAAATCTTGAACAGAGGTCCCGATCGCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526745.6
CDS-3UTR CCA 90 bp GAAGCATATGACTGTTTTCACTATAAGACATCAATTGTGGCCAGGCGCGGTGGCATGGTCATCATTCCTTaGGGTGCTTTGAAGGGTTTT +
Preference number: 4 (lower is better)
Translates to: EAYDCFHYKTSIVARRGGMVIIP*GALKGF
Trigger: AAAACCCTTCAAAGCACCCCAAGGAATGATGACCAT...GCCACCGCGCCTGGCCACAATTGATGTCTTATAGTGAAAACAGTCATATGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524996.1
CDS-3UTR CCA 90 bp TTCAGCAGGCAATTTTGCGTCTTAGAAGTTCAAGACCTCCAGAGACATAGCCAGATGGTTAGAAGGTCATaGTCATCATTCCTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: FSRQFCVLEVQDLQRHSQMVRRS*SSFLGV
Trigger: CACCCCAAGGAATGATGACCATGACCTTCTAACCAT...CTGGCTATGTCTCTGGAGGTCTTGAACTTCTAAGACGCAAAATTGCCTGCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526745.6
ENST00000529860.5
CDS-3UTR CCA 90 bp TGCATTGTCCTGGCTTCTCGCTGGCTCAGGAGTCTTCCTGAAGTAATTACTCGTTTTCATCAGGCAACATaGTTAGAAGGTCATGGTCAT +
Preference number: 4 (lower is better)
Translates to: CIVLASRWLRSLPEVITRFHQAT*LEGHGH
Trigger: ATGACCATGACCTTCTAACCATGTTGCCTGATGAAA...ACGAGTAATTACTTCAGGAAGACTCCTGAGCCAGCGAGAAGCCAGGACAATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CCA 90 bp CAGGCAACATGGTTAGAAGGTCATGGTCATCATTCCTTGGGGTGCTTTGAAGGGCTCGTGGCAAGTCAATaGGTTCAAGCTTCATTTTAT +
Preference number: 4 (lower is better)
Translates to: QATWLEGHGHHSLGCFEGLVASQ*VQASFY
Trigger: ATAAAATGAAGCTTGAACCCATTGACTTGCCACGAG...CCCTTCAAAGCACCCCAAGGAATGATGACCATGACCTTCTAACCATGTTGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
3UTR CAA 72 bp AAGACTGGCAACTTCTGTTTCCTCCTCTTGAGACAATaGCTTTTGGGAGCCCTGGGCTCATATGAGAGAAAT +
Preference number: 4 (lower is better)
Translates to: KTGNFCFLLLRQ*LLGALGSYERN
Trigger: ATTTCTCTCATATGAGCCCAGGGCTCCCAAAAGCAATTGTCTCAAGAGGAGGAAACAGAAGTTGCCAGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216445.8
3UTR CAA 72 bp CAGGCAACATGGTTAGAAGGTCATGGTCATCATTCCTaGGGGTGCTTTGAAGGGTTTTCTTGGCTTTATGGT +
Preference number: 4 (lower is better)
Translates to: QATWLEGHGHHS*GCFEGFSWLYG
Trigger: ACCATAAAGCCAAGAAAACCCTTCAAAGCACCCCAAGGAATGATGACCATGACCTTCTAACCATGTTGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR TCA 90 bp CTCCATTTGGGCCTCTTGTCTTTTACGGATCATTTCCAGCACTTGCATCTTATGCTTCCAAATTCTGATTaGATGCAAAGTCCACACGGC +
Preference number: 4 (lower is better)
Translates to: LHLGLLSFTDHFQHLHLMLPNSD*MQSPHG
Trigger: GCCGTGTGGACTTTGCATTCAATCAGAATTTGGAAG...CATAAGATGCAAGTGCTGGAAATGATCCGTAAAAGACAAGAGGCCCAAATGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR TCA 90 bp TTTCATCAGGCAACATGGTTAGAAGGTCATGGTCATCATTCCTTGGGGTGCTTTCTTCCAAATTCTGATTaGATGCAAAGTCCACACGGC +
Preference number: 4 (lower is better)
Translates to: FHQATWLEGHGHHSLGCFLPNSD*MQSPHG
Trigger: GCCGTGTGGACTTTGCATTCAATCAGAATTTGGAAG...AAAGCACCCCAAGGAATGATGACCATGACCTTCTAACCATGTTGCCTGATGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR TCA 90 bp CCTGCTAGGAAGCAGAAATACCATACAAAGAAGACATGGTTTATGCCCTCATGTATGGGTTCAAGCTTTTaGAGTCTTTGGGGTGGATGC +
Preference number: 4 (lower is better)
Translates to: PARKQKYHTKKTWFMPSCMGSSF*SLWGGC
Trigger: GCATCCACCCCAAAGACTTCAAAAGCTTGAACCCAT...ACATGAGGGCATAAACCATGTCTTCTTTGTATGGTATTTCTGCTTCCTAGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR TCA 90 bp AATTCTTTTGCCTCAGCCTTCGCATCAAGTAGCTGGGATTACAGACGAATGCCACAACCCACAGGAAAGTaGGACAATAAAATGGCTCTT +
Preference number: 4 (lower is better)
Translates to: NSFASAFASSSWDYRRMPQPTGK*DNKMAL
Trigger: AAGAGCCATTTTATTGTCTCACTTTCCTGTGGGTTG...TGGCATTCGTCTGTAATCCCAGCTACTTGATGCGAAGGCTGAGGCAAAAGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR TCA 90 bp CCTTGTGTAGTCCTCTTCTGCATTAACTCCAAGCTGGTCTATGACTTTAACCAAGGCAAATGTCAAAGATaGACCCCAAAGGACCACACT +
Preference number: 4 (lower is better)
Translates to: PCVVLFCINSKLVYDFNQGKCQR*TPKDHT
Trigger: AGTGTGGTCCTTTGGGGTTCATCTTTGACATTTGCC...TTGGTTAAAGTCATAGACCAGCTTGGAGTTAATGCAGAAGAGGACTACACAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR GCA 90 bp CAGGCAACATGGTTAGAAGGTCATGGTCATCATTCCTTGGGGTGCTTTGAAGGGTTTGTTTTGCAAAGGTaGTACTTTGATCACCCTAAG +
Preference number: 4 (lower is better)
Translates to: QATWLEGHGHHSLGCFEGFVLQR*YFDHPK
Trigger: CTTAGGGTGATCAAAGTAGCACCTTTGCAAAACAAA...CCCTTCAAAGCACCCCAAGGAATGATGACCATGACCTTCTAACCATGTTGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR GCA 90 bp CGGGACCTCTGTTCAAGATTTCATCAGGCAACATGGTTAGAAGGTCATGGTCATGCTTTATTCTGGTCCTaGAGTCTTGCCAGTGAATAT +
Preference number: 4 (lower is better)
Translates to: RDLCSRFHQATWLEGHGHALFWS*SLASEY
Trigger: ATATTCACTGGCAAGACTGCAGGACCAGAATAAAGC...ATGACCATGACCTTCTAACCATGTTGCCTGATGAAATCTTGAACAGAGGTCCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR GCA 90 bp CCTGCTAGGAAGCAGAAATACCATACAAAGAAGACATGGTTTATGCCCTCATGTTGTAAAGGTGGCAGCTaGCCTTCCAAGGCTTTATTC +
Preference number: 4 (lower is better)
Translates to: PARKQKYHTKKTWFMPSCCKGGS*PSKALF
Trigger: GAATAAAGCCTTGGAAGGGCAGCTGCCACCTTTACA...ACATGAGGGCATAAACCATGTCTTCTTTGTATGGTATTTCTGCTTCCTAGCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR GCA 90 bp TCTTTAACTCCATTTGGGCCTCTTGTCTTTTACGGATCATTTCCAGCACTTGCATGTAAAGGTGGCAGCTaGCCTTCCAAGGCTTTATTC +
Preference number: 4 (lower is better)
Translates to: SLTPFGPLVFYGSFPALACKGGS*PSKALF
Trigger: GAATAAAGCCTTGGAAGGGCAGCTGCCACCTTTACA...TGCAAGTGCTGGAAATGATCCGTAAAAGACAAGAGGCCCAAATGGAGTTAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR GCA 90 bp AGGAGTCTTCCTGAAGTAATTACTCGTGGCAAGTCAATGGGTTCAAGCTTCATTTGTAAAGGTGGCAGCTaGCCTTCCAAGGCTTTATTC +
Preference number: 4 (lower is better)
Translates to: RSLPEVITRGKSMGSSFICKGGS*PSKALF
Trigger: GAATAAAGCCTTGGAAGGGCAGCTGCCACCTTTACA...AATGAAGCTTGAACCCATTGACTTGCCACGAGTAATTACTTCAGGAAGACTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
CDS-3UTR GCA 90 bp TCATCTTTCCCCTGCTCATCTGAGTCAGAGCTGGAACTGTCCCAGAGAAGCTGTAGTCTTTGGGGTGGATaGCTTTTAATAATACTTGTT +
Preference number: 4 (lower is better)
Translates to: SSFPCSSESELELSQRSCSLWGG*LLIILV
Trigger: AACAAGTATTATTAAAAGGCATCCACCCCAAAGACT...ACAGCTTCTCTGGGACAGTTCCAGCTCTGACTCAGATGAGCAGGGGAAAGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
CDS-3UTR GCA 90 bp CTGGCTTCTCGCTGGCTCAGGAGTCTTCCTGAAGTAATTACTCGTGGCAAGTCAAGCACTTGCATCTTATaGAAATATTGTCTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: LASRWLRSLPEVITRGKSSTCIL*KYCLFS
Trigger: TGAGAACAGACAATATTTGCATAAGATGCAAGTGCT...TGACTTGCCACGAGTAATTACTTCAGGAAGACTCCTGAGCCAGCGAGAAGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR GCA 90 bp GAACTCAGCAACCCACAGGAAAGTGAGACAATAAAATGGCTCTTGGTTAGCCCCTGGCTAGTCAAACAATaGATGCTTTCTTTTGGTGGA +
Preference number: 4 (lower is better)
Translates to: ELSNPQESETIKWLLVSPWLVKQ*MLSFGG
Trigger: TCCACCAAAAGAAAGCATGCATTGTTTGACTAGCCA...GGGGCTAACCAAGAGCCATTTTATTGTCTCACTTTCCTGTGGGTTGCTGAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR CCA 90 bp CCTGCTAGGAAGCAGAAATACCATACAAAGAAGACATGGTTTATGCCCTCATGTTCCAAGGCTTTATTCTaGTCCTGCAGTCTTGCCAGT +
Preference number: 4 (lower is better)
Translates to: PARKQKYHTKKTWFMPSCSKALF*SCSLAS
Trigger: ACTGGCAAGACTGCAGGACCAGAATAAAGCCTTGGA...ACATGAGGGCATAAACCATGTCTTCTTTGTATGGTATTTCTGCTTCCTAGCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR CCA 90 bp TTTAACTCCATTTGGGCCTCTTGTCTTTTACGGATCATTTCCAGCACTTGCATCTCCAAGGCTTTATTCTaGTCCTGCAGTCTTGCCAGT +
Preference number: 4 (lower is better)
Translates to: FNSIWASCLLRIISSTCISKALF*SCSLAS
Trigger: ACTGGCAAGACTGCAGGACCAGAATAAAGCCTTGGA...GATGCAAGTGCTGGAAATGATCCGTAAAAGACAAGAGGCCCAAATGGAGTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CCA 90 bp TCTTACTTGAAGTCTTTGGGGTGGATGCCTTTTAATAATACTTGTTTCTCTGTGGTCCTGGCTTCTCGCTaGCTCAGGAGTCTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: SYLKSLGWMPFNNTCFSVVLASR*LRSLPE
Trigger: TTCAGGAAGACTCCTGAGCCAGCGAGAAGCCAGGAC...CACAGAGAAACAAGTATTATTAAAAGGCATCCACCCCAAAGACTTCAAGTAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534528.5
CDS-3UTR CCA 90 bp TTGTGCATTGTCCTGGCTTCTCGCTGGCTCAGGAGTCTTCCTGAAGTAATTACTGTTTTCTTGGCTTTATaGTCCCTTGGACTTTGCTTA +
Preference number: 4 (lower is better)
Translates to: LCIVLASRWLRSLPEVITVFLAL*SLGLCL
Trigger: TAAGCAAAGTCCAAGGGACCATAAAGCCAAGAAAAC...AGTAATTACTTCAGGAAGACTCCTGAGCCAGCGAGAAGCCAGGACAATGCACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CCA 90 bp AGATTTCATCAGGCAACATGGTTAGAAGGTCATGGTCATCATTCCTTGGGGTGCTTTGAAGGGTTTTCTTaGCTTTATGGTCCCTTGGAC +
Preference number: 4 (lower is better)
Translates to: RFHQATWLEGHGHHSLGCFEGFS*LYGPLD
Trigger: GTCCAAGGGACCATAAAGCCAAGAAAACCCTTCAAA...GCACCCCAAGGAATGATGACCATGACCTTCTAACCATGTTGCCTGATGAAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CCA 90 bp AATTCTTTTGCCTCAGCCTTCGCATCAAGTAGCTGGGATTACAGACGAATGCCAATGGTCATCATTCCTTaGGGTGCTTTGAAGGGTTTT +
Preference number: 4 (lower is better)
Translates to: NSFASAFASSSWDYRRMPMVIIP*GALKGF
Trigger: AAAACCCTTCAAAGCACCCCAAGGAATGATGACCAT...TGGCATTCGTCTGTAATCCCAGCTACTTGATGCGAAGGCTGAGGCAAAAGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR CCA 90 bp GAAGCATATGACTGTTTTCACTATAAGACATCAATTGTGGCCAGGCGCGGTGGCTTTCATCAGGCAACATaGTTAGAAGGTCATGGTCAT +
Preference number: 4 (lower is better)
Translates to: EAYDCFHYKTSIVARRGGFHQAT*LEGHGH
Trigger: ATGACCATGACCTTCTAACCATGTTGCCTGATGAAA...GCCACCGCGCCTGGCCACAATTGATGTCTTATAGTGAAAACAGTCATATGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524996.1
CDS-3UTR CCA 90 bp TTCTTTGAATTTCCGGGACCTCTGTTCAAGATTTCATCAGGCAACATGGTTAGACATCTGAGTCAGAGCTaGAACTGTCCCAGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: FFEFPGPLFKISSGNMVRHLSQS*NCPREA
Trigger: AGCTTCTCTGGGACAGTTCCAGCTCTGACTCAGATG...TCTAACCATGTTGCCTGATGAAATCTTGAACAGAGGTCCCGGAAATTCAAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
CDS-3UTR TCA 90 bp ACTCCATTTGGGCCTCTTGTCTTTTACGGATCATTTCCAGCACTTGCATCTTATCAGGCCCATTTCATGTaGAAGACATTCAGAGGAAAG +
Preference number: 4 (lower is better)
Translates to: TPFGPLVFYGSFPALASYQAHFM*KTFRGK
Trigger: CTTTCCTCTGAATGTCTTTCACATGAAATGGGCCTG...ATAAGATGCAAGTGCTGGAAATGATCCGTAAAAGACAAGAGGCCCAAATGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR TCA 90 bp TTAATGATAAACTCTTTGCCAGCTGTCCTGCTAGGAAGCAGAAATACCATACAAAGCCCTGGGCTCATATaGGAGAAATCTCTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: LMINSLPAVLLGSRNTIQSPGLI*EKSLQC
Trigger: ACACTGCAGAGATTTCTCTCATATGAGCCCAGGGCT...TTGTATGGTATTTCTGCTTCCTAGCAGGACAGCTGGCAAAGAGTTTATCATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR TCA 90 bp TCTAGAAAGCTGGCTAGTCAAACAATGCATGCTTTCTTTTGGTGGAAATATGCTCACATAACAGAATGGTaGAGACGTGCCTTTGGCTCC +
Preference number: 4 (lower is better)
Translates to: SRKLASQTMHAFFWWKYAHITEW*RRAFGS
Trigger: GGAGCCAAAGGCACGTCTTCACCATTCTGTTATGTG...AGCATATTTCCACCAAAAGAAAGCATGCATTGTTTGACTAGCCAGCTTTCTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR GCA 90 bp CAGGCAACATGGTTAGAAGGTCATGGTCATCATTCCTTGGGGTGCTTTGAAGGGAGCACTTGCATCTTATaGAAATATTGTCTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: QATWLEGHGHHSLGCFEGSTCIL*KYCLFS
Trigger: TGAGAACAGACAATATTTGCATAAGATGCAAGTGCT...CCCTTCAAAGCACCCCAAGGAATGATGACCATGACCTTCTAACCATGTTGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR GCA 90 bp CGGGACCTCTGTTCAAGATTTCATCAGGCAACATGGTTAGAAGGTCATGGTCATTGGTCCCTTGGACTTTaGTTATTAATTCTTGCCTCT +
Preference number: 4 (lower is better)
Translates to: RDLCSRFHQATWLEGHGHWSLGL*LLILAS
Trigger: AGAGGCAAGAATTAATAAGCAAAGTCCAAGGGACCA...ATGACCATGACCTTCTAACCATGTTGCCTGATGAAATCTTGAACAGAGGTCCCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR GCA 90 bp AGCTGGCTAGTCAAACAATGCATGCTTTCTTTTGGTGGAAATATGCTTCTTACCGTGATCTTGGCTCATTaGAACCTCTATCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SWLVKQCMLSFGGNMLLTVILAH*NLYLLG
Trigger: ACCCAGGAGATAGAGGTTGCAATGAGCCAAGATCAC...GGTAAGAAGCATATTTCCACCAAAAGAAAGCATGCATTGTTTGACTAGCCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR GCA 90 bp AATTACTCGTGGCAAGTCAATGGGTTCAAGCTTCTAGAAGTTCAACGTTTAGAGAGTACCTTTGCTTTGTaGATTGTCCTGGCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: NYSWQVNGFKLLEVQRLESTFAL*IVLASR
Trigger: GCGAGAAGCCAGGACAATGCACAAAGCAAAGGTACT...CTCTAAACGTTGAACTTCTAGAAGCTTGAACCCATTGACTTGCCACGAGTAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526745.6
CDS-3UTR CCA 90 bp AATTACTCGTGGCAAGTCAATGGGTTCAAGCTTCTAGAAGTTCAACGTTTAGAGTCCAAGGCTTTATTCTaGTCCTGCAGTCTTGCCAGT +
Preference number: 4 (lower is better)
Translates to: NYSWQVNGFKLLEVQRLESKALF*SCSLAS
Trigger: ACTGGCAAGACTGCAGGACCAGAATAAAGCCTTGGA...CTCTAAACGTTGAACTTCTAGAAGCTTGAACCCATTGACTTGCCACGAGTAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526336.1
ENST00000526745.6
CDS-3UTR CCA 90 bp GAACTCAGCAACCCACAGGAAAGTGAGACAATAAAATGGCTCTTGGTTAGCCCCGGCTTTATGGTCCCTTaGACTTTGCTTATTAATTCT +
Preference number: 4 (lower is better)
Translates to: ELSNPQESETIKWLLVSPGFMVP*TLLINS
Trigger: AGAATTAATAAGCAAAGTCCAAGGGACCATAAAGCC...GGGGCTAACCAAGAGCCATTTTATTGTCTCACTTTCCTGTGGGTTGCTGAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR CCA 90 bp TTTCAACTGTGGGTTTGCCCGGGACCTCTGTTCAAGATTTCATCAGGCAACATGGGCTTTATGGTCCCTTaGACTTTGCTTATTAATTCT +
Preference number: 4 (lower is better)
Translates to: FQLWVCPGPLFKISSGNMGFMVP*TLLINS
Trigger: AGAATTAATAAGCAAAGTCCAAGGGACCATAAAGCC...CATGTTGCCTGATGAAATCTTGAACAGAGGTCCCGGGCAAACCCACAGTTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529860.5
CDS-3UTR CCA 90 bp CCTGAAGCATATGACTGTTTTCACTATAAGACATCAATTGTGGCCAGGCGCGGTGTTTTCTTGGCTTTATaGTCCCTTGGACTTTGCTTA +
Preference number: 4 (lower is better)
Translates to: PEAYDCFHYKTSIVARRGVFLAL*SLGLCL
Trigger: TAAGCAAAGTCCAAGGGACCATAAAGCCAAGAAAAC...ACCGCGCCTGGCCACAATTGATGTCTTATAGTGAAAACAGTCATATGCTTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524996.1
CDS-3UTR CCA 90 bp TTTTGCGTCTTAGAAGTTCAAGACCTCCAGAGACATAGCCAGCTTTTCTGCAGCGTTTTCTTGGCTTTATaGTCCCTTGGACTTTGCTTA +
Preference number: 4 (lower is better)
Translates to: FCVLEVQDLQRHSQLFCSVFLAL*SLGLCL
Trigger: TAAGCAAAGTCCAAGGGACCATAAAGCCAAGAAAAC...GCTGCAGAAAAGCTGGCTATGTCTCTGGAGGTCTTGAACTTCTAAGACGCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000526745.6
ENST00000529860.5
CDS-3UTR CCA 90 bp TCTTTAACTCCATTTGGGCCTCTTGTCTTTTACGGATCATTTCCAGCACTTGCAATGGTTAGAAGGTCATaGTCATCATTCCTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: SLTPFGPLVFYGSFPALAMVRRS*SSFLGV
Trigger: CACCCCAAGGAATGATGACCATGACCTTCTAACCAT...TGCAAGTGCTGGAAATGATCCGTAAAAGACAAGAGGCCCAAATGGAGTTAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CCA 90 bp CCATTTTGCCAATTTTCCAGGGACAGTAGTTATTCACTGCTTGATGTTTCAAAACCTCACCAGTGCTCGTaGCTTCTTCTCATCTTTCCC +
Preference number: 4 (lower is better)
Translates to: PFCQFSRDSSYSLLDVSKPHQCS*LLLIFP
Trigger: GGGAAAGATGAGAAGAAGCCACGAGCACTGGTGAGG...TTTTGAAACATCAAGCAGTGAATAACTACTGTCCCTGGAAAATTGGCAAAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CCA 90 bp CATTTTGCCAATTTTCCAGGGACAGTAGTTATTCACTGCTTGATGTTTCAAAAAGGATTCTCTCTGTCCTaGTCCTCACCAGTGCTCGTG +
Preference number: 4 (lower is better)
Translates to: HFANFPGTVVIHCLMFQKGFSLS*SSPVLV
Trigger: CACGAGCACTGGTGAGGACCAGGACAGAGAGAATCC...TTTTTGAAACATCAAGCAGTGAATAACTACTGTCCCTGGAAAATTGGCAAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CCA 90 bp CTGTGGGTTTGCCCGGGACCTCTGTTCAAGATTTCATCAGGCAACATGGTTAGAGTGTGTGAACAATATTaGAAATTTCAACTGTGGGTT +
Preference number: 4 (lower is better)
Translates to: LWVCPGPLFKISSGNMVRVCEQY*KFQLWV
Trigger: AACCCACAGTTGAAATTTCCAATATTGTTCACACAC...TCTAACCATGTTGCCTGATGAAATCTTGAACAGAGGTCCCGGGCAAACCCACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529860.5
CDS-3UTR TCA 90 bp AATTACTCGTGGCAAGTCAATGGGTTCAAGCTTCTAGAAGTTCAACGTTTAGAGCAGGCCCATTTCATGTaGAAGACATTCAGAGGAAAG +
Preference number: 4 (lower is better)
Translates to: NYSWQVNGFKLLEVQRLEQAHFM*KTFRGK
Trigger: CTTTCCTCTGAATGTCTTTCACATGAAATGGGCCTG...CTCTAAACGTTGAACTTCTAGAAGCTTGAACCCATTGACTTGCCACGAGTAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526336.1
ENST00000526745.6
CDS-3UTR TCA 90 bp TTAATGATAAACTCTTTGCCAGCTGTCCTGCTAGGAAGCAGAAATACCATACAAGCTCAGGAGTCTTCCTaGAGTAATTACTCGTGGCAA +
Preference number: 4 (lower is better)
Translates to: LMINSLPAVLLGSRNTIQAQESS*SNYSWQ
Trigger: TTGCCACGAGTAATTACTTCAGGAAGACTCCTGAGC...TTGTATGGTATTTCTGCTTCCTAGCAGGACAGCTGGCAAAGAGTTTATCATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR TCA 90 bp AGTAATTACTCGTGGCAAGTCAATGGGTTCAAGCTTCTAGAAGTTCAACGTTTAGCTCAGGAGTCTTCCTaGAGTAATTACTCGTGGCAA +
Preference number: 4 (lower is better)
Translates to: SNYSWQVNGFKLLEVQRLAQESS*SNYSWQ
Trigger: TTGCCACGAGTAATTACTTCAGGAAGACTCCTGAGC...TAAACGTTGAACTTCTAGAAGCTTGAACCCATTGACTTGCCACGAGTAATTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526336.1
ENST00000526745.6
CDS-3UTR TCA 90 bp CCTTGTGTAGTCCTCTTCTGCATTAACTCCAAGCTGGTCTATGACTTTAACCAAAGAACATGGTGGAAGTaGTGCAAAGTCAGTTCTATG +
Preference number: 4 (lower is better)
Translates to: PCVVLFCINSKLVYDFNQRTWWK*CKVSSM
Trigger: CATAGAACTGACTTTGCATCACTTCCACCATGTTCT...TTGGTTAAAGTCATAGACCAGCTTGGAGTTAATGCAGAAGAGGACTACACAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR TCA 90 bp CCTGAAGCATATGACTGTTTTCACTATAAGACATCAATTGTGGCCAGGCGCGGTATAATGGATTCAAAGTaGCACATCCCTGAAGCATAT +
Preference number: 4 (lower is better)
Translates to: PEAYDCFHYKTSIVARRGIMDSK*HIPEAY
Trigger: ATATGCTTCAGGGATGTGTCACTTTGAATCCATTAT...ACCGCGCCTGGCCACAATTGATGTCTTATAGTGAAAACAGTCATATGCTTCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524996.1
CDS-3UTR GCA 90 bp CCTGCTAGGAAGCAGAAATACCATACAAAGAAGACATGGTTTATGCCCTCATGTGCTTTATTCTGGTCCTaGAGTCTTGCCAGTGAATAT +
Preference number: 4 (lower is better)
Translates to: PARKQKYHTKKTWFMPSCALFWS*SLASEY
Trigger: ATATTCACTGGCAAGACTGCAGGACCAGAATAAAGC...ACATGAGGGCATAAACCATGTCTTCTTTGTATGGTATTTCTGCTTCCTAGCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR GCA 90 bp CACAGCGATCGGGACCTCTGTTCAAGATTTCATCAGGCAACATGGTTAGAAGGTAGTCTTTGGGGTGGATaGCTTTTAATAATACTTGTT +
Preference number: 4 (lower is better)
Translates to: HSDRDLCSRFHQATWLEGSLWGG*LLIILV
Trigger: AACAAGTATTATTAAAAGGCATCCACCCCAAAGACT...ACCTTCTAACCATGTTGCCTGATGAAATCTTGAACAGAGGTCCCGATCGCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526745.6
CDS-3UTR GCA 90 bp CGTGACATTATCTCACGTGTATCCTGTAGGCTCTCTGTTACGGTTAGCTCACTACTTTTGGTGGAAATATaGTTCTTACCTACCACAGAA +
Preference number: 4 (lower is better)
Translates to: RDIISRVSCRLSVTVSSLLLVEI*FLPTTE
Trigger: TTCTGTGGTAGGTAAGAAGCATATTTCCACCAAAAG...TAGTGAGCTAACCGTAACAGAGAGCCTACAGGATACACGTGAGATAATGTCACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR CCA 90 bp AGTAATTACTCGTGGCAAGTCAATGGGTTCAAGCTTCTAGAAGTTCAACGTTTATCCAAGGCTTTATTCTaGTCCTGCAGTCTTGCCAGT +
Preference number: 4 (lower is better)
Translates to: SNYSWQVNGFKLLEVQRLSKALF*SCSLAS
Trigger: ACTGGCAAGACTGCAGGACCAGAATAAAGCCTTGGA...TAAACGTTGAACTTCTAGAAGCTTGAACCCATTGACTTGCCACGAGTAATTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526336.1
ENST00000526745.6
CDS-3UTR CCA 90 bp TTGTGCATTGTCCTGGCTTCTCGCTGGCTCAGGAGTCTTCCTGAAGTAATTACTTTGAAGTCTTTGGGGTaGATGCCTTTTAATAATACT +
Preference number: 4 (lower is better)
Translates to: LCIVLASRWLRSLPEVITLKSLG*MPFNNT
Trigger: AGTATTATTAAAAGGCATCCACCCCAAAGACTTCAA...AGTAATTACTTCAGGAAGACTCCTGAGCCAGCGAGAAGCCAGGACAATGCACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000526336.1
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CCA 90 bp TTTCATCAGGCAACATGGTTAGAAGGTCATGGTCATCATTCCTTGGGGTGCTTTTTCTTTAACTCCATTTaGGCCTCTTGTCTTTTACGG +
Preference number: 4 (lower is better)
Translates to: FHQATWLEGHGHHSLGCFFFNSI*ASCLLR
Trigger: CCGTAAAAGACAAGAGGCCCAAATGGAGTTAAAGAA...AAAGCACCCCAAGGAATGATGACCATGACCTTCTAACCATGTTGCCTGATGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CCA 90 bp AATTACTCGTGGCAAGTCAATGGGTTCAAGCTTTTGAAGTCTTTGGGGTGGATGTTCTTTAACTCCATTTaGGCCTCTTGTCTTTTACGG +
Preference number: 4 (lower is better)
Translates to: NYSWQVNGFKLLKSLGWMFFNSI*ASCLLR
Trigger: CCGTAAAAGACAAGAGGCCCAAATGGAGTTAAAGAA...CATCCACCCCAAAGACTTCAAAAGCTTGAACCCATTGACTTGCCACGAGTAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529860.5
CDS-3UTR CCA 90 bp ACTCCATTTGGGCCTCTTGTCTTTTACGGATCATTTCCAGCACTTGCATCTTATATGGTCATCATTCCTTaGGGTGCTTTGAAGGGTTTT +
Preference number: 4 (lower is better)
Translates to: TPFGPLVFYGSFPALASYMVIIP*GALKGF
Trigger: AAAACCCTTCAAAGCACCCCAAGGAATGATGACCAT...ATAAGATGCAAGTGCTGGAAATGATCCGTAAAAGACAAGAGGCCCAAATGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CCA 90 bp AGGAGTCTTCCTGAAGTAATTACTCGTGGCAAGTCAATGGGTTCAAGCTTCATTAAACTCATCGAAAAGTaGGATTCTCTCTGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: RSLPEVITRGKSMGSSFIKLIEK*DSLCPG
Trigger: ACCAGGACAGAGAGAATCCCACTTTTCGATGAGTTT...AATGAAGCTTGAACCCATTGACTTGCCACGAGTAATTACTTCAGGAAGACTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CCA 90 bp AATTCTTTTGCCTCAGCCTTCGCATCAAGTAGCTGGGATTACAGACGAATGCCAAAAAACATGGTGAGGTaGCAAATGTCAAAGATGAAC +
Preference number: 4 (lower is better)
Translates to: NSFASAFASSSWDYRRMPKNMVR*QMSKMN
Trigger: GTTCATCTTTGACATTTGCCACCTCACCATGTTTTT...TGGCATTCGTCTGTAATCCCAGCTACTTGATGCGAAGGCTGAGGCAAAAGAATT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR CCA 90 bp GAACTCAGCAACCCACAGGAAAGTGAGACAATAAAATGGCTCTTGGTTAGCCCCCATGCTTTCTTTTGGTaGAAATATGCTTCTTACCTA +
Preference number: 4 (lower is better)
Translates to: ELSNPQESETIKWLLVSPHAFFW*KYASYL
Trigger: TAGGTAAGAAGCATATTTCCACCAAAAGAAAGCATG...GGGGCTAACCAAGAGCCATTTTATTGTCTCACTTTCCTGTGGGTTGCTGAGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR CCA 90 bp TGGATTCAAAGTGACACATCCCTGAAGCATATGACTGTTTTCACTATAAGACATAATACAAAAGTTAGCTaGGCGTGGTGGCAGGCACCT +
Preference number: 4 (lower is better)
Translates to: WIQSDTSLKHMTVFTIRHNTKVS*AWWQAP
Trigger: AGGTGCCTGCCACCACGCCCAGCTAACTTTTGTATT...ATGTCTTATAGTGAAAACAGTCATATGCTTCAGGGATGTGTCACTTTGAATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524996.1
CDS-3UTR TCA 90 bp TTAATGATAAACTCTTTGCCAGCTGTCCTGCTAGGAAGCAGAAATACCATACAACAGGCCCATTTCATGTaGAAGACATTCAGAGGAAAG +
Preference number: 4 (lower is better)
Translates to: LMINSLPAVLLGSRNTIQQAHFM*KTFRGK
Trigger: CTTTCCTCTGAATGTCTTTCACATGAAATGGGCCTG...TTGTATGGTATTTCTGCTTCCTAGCAGGACAGCTGGCAAAGAGTTTATCATTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR TCA 90 bp TCTTTAACTCCATTTGGGCCTCTTGTCTTTTACGGATCATTTCCAGCACTTGCAATTCTTGCCTCTCCATaGAGACTTTTCTTTAACTCC +
Preference number: 4 (lower is better)
Translates to: SLTPFGPLVFYGSFPALAILASP*RLFFNS
Trigger: GGAGTTAAAGAAAAGTCTTCATGGAGAGGCAAGAAT...TGCAAGTGCTGGAAATGATCCGTAAAAGACAAGAGGCCCAAATGGAGTTAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR TCA 90 bp TTAATTCACAACGATCTTCTACACGTGACATTATCTCACGTGTATCCTGTAGGCACGATCTTCTACACGTaGCATTATCTCACGTGTATC +
Preference number: 4 (lower is better)
Translates to: LIHNDLLHVTLSHVYPVGTIFYT*HYLTCI
Trigger: GATACACGTGAGATAATGTCACGTGTAGAAGATCGT...GCCTACAGGATACACGTGAGATAATGTCACGTGTAGAAGATCGTTGTGAATTAA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR GCA 90 bp TCGTGGCAAGTCAATGGGTTCAAGCTTCTAGAAGTTCAACGTTTAGAGCAGTCATTTGTTTTGCAAAGGTaGTACTTTGATCACCCTAAG +
Preference number: 4 (lower is better)
Translates to: SWQVNGFKLLEVQRLEQSFVLQR*YFDHPK
Trigger: CTTAGGGTGATCAAAGTAGCACCTTTGCAAAACAAA...TGACTGCTCTAAACGTTGAACTTCTAGAAGCTTGAACCCATTGACTTGCCACGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526336.1
ENST00000526745.6
CDS-3UTR GCA 90 bp AATTACTCGTGGCAAGTCAATGGGTTCAAGCTTCTAGAAGTTCAACGTTTAGAGGCTTTATTCTGGTCCTaGAGTCTTGCCAGTGAATAT +
Preference number: 4 (lower is better)
Translates to: NYSWQVNGFKLLEVQRLEALFWS*SLASEY
Trigger: ATATTCACTGGCAAGACTGCAGGACCAGAATAAAGC...CTCTAAACGTTGAACTTCTAGAAGCTTGAACCCATTGACTTGCCACGAGTAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526336.1
ENST00000526745.6
CDS-3UTR GCA 90 bp ACTCCATTTGGGCCTCTTGTCTTTTACGGATCATTTCCAGCACTTGCATCTTATTGGTCCCTTGGACTTTaGTTATTAATTCTTGCCTCT +
Preference number: 4 (lower is better)
Translates to: TPFGPLVFYGSFPALASYWSLGL*LLILAS
Trigger: AGAGGCAAGAATTAATAAGCAAAGTCCAAGGGACCA...ATAAGATGCAAGTGCTGGAAATGATCCGTAAAAGACAAGAGGCCCAAATGGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CCA 90 bp CGGGACCTCTGTTCAAGATTTCATCAGGCAACATGGTTAGAAGGTCATGGTCATTTGAAGTCTTTGGGGTaGATGCCTTTTAATAATACT +
Preference number: 4 (lower is better)
Translates to: RDLCSRFHQATWLEGHGHLKSLG*MPFNNT
Trigger: AGTATTATTAAAAGGCATCCACCCCAAAGACTTCAA...ATGACCATGACCTTCTAACCATGTTGCCTGATGAAATCTTGAACAGAGGTCCCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CCA 90 bp TTGAATTTCCGGGACCTCTGTTCAAGATTTCATCAGGCAACATGGTTAGAAGGTTTCTTTAACTCCATTTaGGCCTCTTGTCTTTTACGG +
Preference number: 4 (lower is better)
Translates to: LNFRDLCSRFHQATWLEGFFNSI*ASCLLR
Trigger: CCGTAAAAGACAAGAGGCCCAAATGGAGTTAAAGAA...ACCTTCTAACCATGTTGCCTGATGAAATCTTGAACAGAGGTCCCGGAAATTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CCA 90 bp CCTTGTGTAGTCCTCTTCTGCATTAACTCCAAGCTGGTCTATGACTTTAACCAAGTTTTCTTGGCTTTATaGTCCCTTGGACTTTGCTTA +
Preference number: 4 (lower is better)
Translates to: PCVVLFCINSKLVYDFNQVFLAL*SLGLCL
Trigger: TAAGCAAAGTCCAAGGGACCATAAAGCCAAGAAAAC...TTGGTTAAAGTCATAGACCAGCTTGGAGTTAATGCAGAAGAGGACTACACAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR CCA 90 bp ACTCCATTTGGGCCTCTTGTCTTTTACGGATCATTTCCAGCACTTGCATCTTATGTTTTCTTGGCTTTATaGTCCCTTGGACTTTGCTTA +
Preference number: 4 (lower is better)
Translates to: TPFGPLVFYGSFPALASYVFLAL*SLGLCL
Trigger: TAAGCAAAGTCCAAGGGACCATAAAGCCAAGAAAAC...ATAAGATGCAAGTGCTGGAAATGATCCGTAAAAGACAAGAGGCCCAAATGGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CCA 90 bp CTGTTCAAGATTTCATCAGGCAACATGGTTAGAAGGTCATGGTCATCATTCCTTATGGTCATCATTCCTTaGGGTGCTTTGAAGGGTTTT +
Preference number: 4 (lower is better)
Translates to: LFKISSGNMVRRSWSSFLMVIIP*GALKGF
Trigger: AAAACCCTTCAAAGCACCCCAAGGAATGATGACCAT...AAGGAATGATGACCATGACCTTCTAACCATGTTGCCTGATGAAATCTTGAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CCA 90 bp TTAATGATAAACTCTTTGCCAGCTGTCCTGCTAGGAAGCAGAAATACCATACAAATGGTTAGAAGGTCATaGTCATCATTCCTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: LMINSLPAVLLGSRNTIQMVRRS*SSFLGV
Trigger: CACCCCAAGGAATGATGACCATGACCTTCTAACCAT...TTGTATGGTATTTCTGCTTCCTAGCAGGACAGCTGGCAAAGAGTTTATCATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR CCA 90 bp CCTGCTAGGAAGCAGAAATACCATACAAAGAAGACATGGTTTATGCCCTCATGTTTTCATCAGGCAACATaGTTAGAAGGTCATGGTCAT +
Preference number: 4 (lower is better)
Translates to: PARKQKYHTKKTWFMPSCFHQAT*LEGHGH
Trigger: ATGACCATGACCTTCTAACCATGTTGCCTGATGAAA...ACATGAGGGCATAAACCATGTCTTCTTTGTATGGTATTTCTGCTTCCTAGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR CCA 90 bp AGGAGTCTTCCTGAAGTAATTACTCGTGGCAAGTCAATGGGTTCAAGCTTCATTTTTCATCAGGCAACATaGTTAGAAGGTCATGGTCAT +
Preference number: 4 (lower is better)
Translates to: RSLPEVITRGKSMGSSFIFHQAT*LEGHGH
Trigger: ATGACCATGACCTTCTAACCATGTTGCCTGATGAAA...AATGAAGCTTGAACCCATTGACTTGCCACGAGTAATTACTTCAGGAAGACTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CCA 90 bp AGCTGGCTAGTCAAACAATGCATGCTTTCTTTTGGTGGAAATATGCTTCTTACCAAACTCATCGAAAAGTaGGATTCTCTCTGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: SWLVKQCMLSFGGNMLLTKLIEK*DSLCPG
Trigger: ACCAGGACAGAGAGAATCCCACTTTTCGATGAGTTT...GGTAAGAAGCATATTTCCACCAAAAGAAAGCATGCATTGTTTGACTAGCCAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR CCA 90 bp CCTTGTGTAGTCCTCTTCTGCATTAACTCCAAGCTGGTCTATGACTTTAACCAAGCATTAACTCCAAGCTaGTCTATGACTTTAACCAAC +
Preference number: 4 (lower is better)
Translates to: PCVVLFCINSKLVYDFNQALTPS*SMTLTN
Trigger: GTTGGTTAAAGTCATAGACCAGCTTGGAGTTAATGC...TTGGTTAAAGTCATAGACCAGCTTGGAGTTAATGCAGAAGAGGACTACACAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR CCA 90 bp AGCTGGCTAGTCAAACAATGCATGCTTTCTTTTGGTGGAAATATGCTTCTTACCGGAATAGATATGGCCTaGGACAATCTAATAGCCTTC +
Preference number: 4 (lower is better)
Translates to: SWLVKQCMLSFGGNMLLTGIDMA*DNLIAF
Trigger: GAAGGCTATTAGATTGTCCCAGGCCATATCTATTCC...GGTAAGAAGCATATTTCCACCAAAAGAAAGCATGCATTGTTTGACTAGCCAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR CCA 90 bp ATTCAAAGTGACACATCCCTGAAGCATATGACTGTTTTCACTATAAGACATCAAATAAGACATCAATTGTaGCCAGGCGCGGTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: IQSDTSLKHMTVFTIRHQIRHQL*PGAVAH
Trigger: ATGAGCCACCGCGCCTGGCCACAATTGATGTCTTAT...TTGATGTCTTATAGTGAAAACAGTCATATGCTTCAGGGATGTGTCACTTTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524996.1
CDS-3UTR GCA 90 bp TCGTGGCAAGTCAATGGGTTCAAGCTTCTAGAAGTTCAACGTTTAGAGCAGTCAATACATGTCTCTGGATaGTGTAGAATATCTTCCATA +
Preference number: 4 (lower is better)
Translates to: SWQVNGFKLLEVQRLEQSIHVSG*CRISSI
Trigger: TATGGAAGATATTCTACAGCATCCAGAGACATGTAT...TGACTGCTCTAAACGTTGAACTTCTAGAAGCTTGAACCCATTGACTTGCCACGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526336.1
ENST00000526745.6
CDS-3UTR GCA 90 bp ATTTCATCAGGCAACATGGTTAGAAGGTCATGGTCATCATTCCTTGGGGTGCTTATACATGTCTCTGGATaGTGTAGAATATCTTCCATA +
Preference number: 4 (lower is better)
Translates to: ISSGNMVRRSWSSFLGVLIHVSG*CRISSI
Trigger: TATGGAAGATATTCTACAGCATCCAGAGACATGTAT...AAGCACCCCAAGGAATGATGACCATGACCTTCTAACCATGTTGCCTGATGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526745.6
ENST00000530417.6
CDS-3UTR GCA 90 bp AAGATTTCATCAGGCAACATGGTTAGAAGGTCATGGTCATCATTCCTTGGGGTGATACATGTCTCTGGATaGTGTAGAATATCTTCCATA +
Preference number: 4 (lower is better)
Translates to: KISSGNMVRRSWSSFLGVIHVSG*CRISSI
Trigger: TATGGAAGATATTCTACAGCATCCAGAGACATGTAT...CACCCCAAGGAATGATGACCATGACCTTCTAACCATGTTGCCTGATGAAATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526745.6
ENST00000530417.6
CDS-3UTR GCA 90 bp AATTACTCGTGGCAAGTCAATGGGTTCAAGCTTTTGAAGTCTTTGGGGTGGATGAGTCTTTGGGGTGGATaGCTTTTAATAATACTTGTT +
Preference number: 4 (lower is better)
Translates to: NYSWQVNGFKLLKSLGWMSLWGG*LLIILV
Trigger: AACAAGTATTATTAAAAGGCATCCACCCCAAAGACT...CATCCACCCCAAAGACTTCAAAAGCTTGAACCCATTGACTTGCCACGAGTAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000529860.5
CDS-3UTR GCA 90 bp CCTTGTGTAGTCCTCTTCTGCATTAACTCCAAGCTGGTCTATGACTTTAACCAATTCTTTTCTAGTACCTaGTTTGCTTTGTGCATTGTC +
Preference number: 4 (lower is better)
Translates to: PCVVLFCINSKLVYDFNQFFSST*FALCIV
Trigger: GACAATGCACAAAGCAAAGCAGGTACTAGAAAAGAA...TTGGTTAAAGTCATAGACCAGCTTGGAGTTAATGCAGAAGAGGACTACACAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR GCA 90 bp CTCCATTTGGGCCTCTTGTCTTTTACGGATCATTTCCAGCACTTGCATCTTATGAGCACTTGCATCTTATaGAAATATTGTCTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: LHLGLLSFTDHFQHLHLMSTCIL*KYCLFS
Trigger: TGAGAACAGACAATATTTGCATAAGATGCAAGTGCT...CATAAGATGCAAGTGCTGGAAATGATCCGTAAAAGACAAGAGGCCCAAATGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR GCA 90 bp AGCTGGCTAGTCAAACAATGCATGCTTTCTTTTGGTGGAAATATGCTTCTTACCTGGTCCCTTGGACTTTaGTTATTAATTCTTGCCTCT +
Preference number: 4 (lower is better)
Translates to: SWLVKQCMLSFGGNMLLTWSLGL*LLILAS
Trigger: AGAGGCAAGAATTAATAAGCAAAGTCCAAGGGACCA...GGTAAGAAGCATATTTCCACCAAAAGAAAGCATGCATTGTTTGACTAGCCAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR CCA 90 bp TCGTGGCAAGTCAATGGGTTCAAGCTTCTAGAAGTTCAACGTTTAGAGCAGTCATTGAAGTCTTTGGGGTaGATGCCTTTTAATAATACT +
Preference number: 4 (lower is better)
Translates to: SWQVNGFKLLEVQRLEQSLKSLG*MPFNNT
Trigger: AGTATTATTAAAAGGCATCCACCCCAAAGACTTCAA...TGACTGCTCTAAACGTTGAACTTCTAGAAGCTTGAACCCATTGACTTGCCACGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526336.1
ENST00000526745.6
CDS-3UTR CCA 90 bp AAGATTTCATCAGGCAACATGGTTAGAAGGTCATGGTCATCATTCCTTGGGGTGTTGAAGTCTTTGGGGTaGATGCCTTTTAATAATACT +
Preference number: 4 (lower is better)
Translates to: KISSGNMVRRSWSSFLGVLKSLG*MPFNNT
Trigger: AGTATTATTAAAAGGCATCCACCCCAAAGACTTCAA...CACCCCAAGGAATGATGACCATGACCTTCTAACCATGTTGCCTGATGAAATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CCA 90 bp TTAATTCACAACGATCTTCTACACGTGACATTATCTCACGTGTATCCTGTAGGCTTCTTTAACTCCATTTaGGCCTCTTGTCTTTTACGG +
Preference number: 4 (lower is better)
Translates to: LIHNDLLHVTLSHVYPVGFFNSI*ASCLLR
Trigger: CCGTAAAAGACAAGAGGCCCAAATGGAGTTAAAGAA...GCCTACAGGATACACGTGAGATAATGTCACGTGTAGAAGATCGTTGTGAATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR CCA 90 bp AGGAGTCTTCCTGAAGTAATTACTCGTGGCAAGTCAATGGGTTCAAGCTTCATTGGCTTTATGGTCCCTTaGACTTTGCTTATTAATTCT +
Preference number: 4 (lower is better)
Translates to: RSLPEVITRGKSMGSSFIGFMVP*TLLINS
Trigger: AGAATTAATAAGCAAAGTCCAAGGGACCATAAAGCC...AATGAAGCTTGAACCCATTGACTTGCCACGAGTAATTACTTCAGGAAGACTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CCA 90 bp TATTCTTTGAATTTCCGGGACCTCTGTTCAAGATTTCATCAGGCAACATGGTTATTTGAAGGGTTTTCTTaGCTTTATGGTCCCTTGGAC +
Preference number: 4 (lower is better)
Translates to: YSLNFRDLCSRFHQATWLFEGFS*LYGPLD
Trigger: GTCCAAGGGACCATAAAGCCAAGAAAACCCTTCAAA...TAACCATGTTGCCTGATGAAATCTTGAACAGAGGTCCCGGAAATTCAAAGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CCA 90 bp CAAAGTGACACATCCCTGAAGCATATGACTGTTTTCACTATAAGACATCAATTGATGGTTAGAAGGTCATaGTCATCATTCCTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: QSDTSLKHMTVFTIRHQLMVRRS*SSFLGV
Trigger: CACCCCAAGGAATGATGACCATGACCTTCTAACCAT...CAATTGATGTCTTATAGTGAAAACAGTCATATGCTTCAGGGATGTGTCACTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524996.1
CDS-3UTR CCA 90 bp TTCTTTGAATTTCCGGGACCTCTGTTCAAGATTTCATCAGGCAACATGGTTAGATTTCATCAGGCAACATaGTTAGAAGGTCATGGTCAT +
Preference number: 4 (lower is better)
Translates to: FFEFPGPLFKISSGNMVRFHQAT*LEGHGH
Trigger: ATGACCATGACCTTCTAACCATGTTGCCTGATGAAA...TCTAACCATGTTGCCTGATGAAATCTTGAACAGAGGTCCCGGAAATTCAAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CCA 90 bp CTGTTCAAGATTTCATCAGGCAACATGGTTAGAAGGTCATGGTCATCATTCCTTCTCGTGGCAAGTCAATaGGTTCAAGCTTCATTTTAT +
Preference number: 4 (lower is better)
Translates to: LFKISSGNMVRRSWSSFLLVASQ*VQASFY
Trigger: ATAAAATGAAGCTTGAACCCATTGACTTGCCACGAG...AAGGAATGATGACCATGACCTTCTAACCATGTTGCCTGATGAAATCTTGAACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
CDS-3UTR TCA 90 bp CAGTTCATTAAGCTTGTGGAAGTGGGTTTCGTGAAATTGAATTTTAAGTCACATCTTCCAAATTCTGATTaGATGCAAAGTCCACACGGC +
Preference number: 4 (lower is better)
Translates to: QFIKLVEVGFVKLNFKSHLPNSD*MQSPHG
Trigger: GCCGTGTGGACTTTGCATTCAATCAGAATTTGGAAG...ATGTGACTTAAAATTCAATTTCACGAAACCCACTTCCACAAGCTTAATGAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR TCA 90 bp TTAATGATAAACTCTTTGCCAGCTGTCCTGCTAGGAAGCAGAAATACCATACAAATTCTTGCCTCTCCATaGAGACTTTTCTTTAACTCC +
Preference number: 4 (lower is better)
Translates to: LMINSLPAVLLGSRNTIQILASP*RLFFNS
Trigger: GGAGTTAAAGAAAAGTCTTCATGGAGAGGCAAGAAT...TTGTATGGTATTTCTGCTTCCTAGCAGGACAGCTGGCAAAGAGTTTATCATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR TCA 90 bp CATTTTGCCAATTTTCCAGGGACAGTAGTTATTCACTGCTTGATGTTTCAAAAATGGGCCTCTTGTTCATaGAGCCATGTTTCCATTTTG +
Preference number: 4 (lower is better)
Translates to: HFANFPGTVVIHCLMFQKWASCS*SHVSIL
Trigger: CAAAATGGAAACATGGCTTCATGAACAAGAGGCCCA...TTTTTGAAACATCAAGCAGTGAATAACTACTGTCCCTGGAAAATTGGCAAAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
CDS-3UTR GCA 90 bp AGCTGGCTAGTCAAACAATGCATGCTTTCTTTTGGTGGAAATATGCTTCTTACCTTTGTTTTGCAAAGGTaGTACTTTGATCACCCTAAG +
Preference number: 4 (lower is better)
Translates to: SWLVKQCMLSFGGNMLLTFVLQR*YFDHPK
Trigger: CTTAGGGTGATCAAAGTAGCACCTTTGCAAAACAAA...GGTAAGAAGCATATTTCCACCAAAAGAAAGCATGCATTGTTTGACTAGCCAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR GCA 90 bp CCTTGTGTAGTCCTCTTCTGCATTAACTCCAAGCTGGTCTATGACTTTAACCAAATACATGTCTCTGGATaGTGTAGAATATCTTCCATA +
Preference number: 4 (lower is better)
Translates to: PCVVLFCINSKLVYDFNQIHVSG*CRISSI
Trigger: TATGGAAGATATTCTACAGCATCCAGAGACATGTAT...TTGGTTAAAGTCATAGACCAGCTTGGAGTTAATGCAGAAGAGGACTACACAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR GCA 90 bp CCTTGTGTAGTCCTCTTCTGCATTAACTCCAAGCTGGTCTATGACTTTAACCAAAGCACTTGCATCTTATaGAAATATTGTCTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: PCVVLFCINSKLVYDFNQSTCIL*KYCLFS
Trigger: TGAGAACAGACAATATTTGCATAAGATGCAAGTGCT...TTGGTTAAAGTCATAGACCAGCTTGGAGTTAATGCAGAAGAGGACTACACAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR CCA 90 bp TCTAGAAAGCTGGCTAGTCAAACAATGCATGCTTTCTTTTGGTGGAAATATGCTCATACAAAGAAGACATaGTTTATGCCCTCATGTAGC +
Preference number: 4 (lower is better)
Translates to: SRKLASQTMHAFFWWKYAHTKKT*FMPSCS
Trigger: GCTACATGAGGGCATAAACCATGTCTTCTTTGTATG...AGCATATTTCCACCAAAAGAAAGCATGCATTGTTTGACTAGCCAGCTTTCTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR GCA 90 bp CTTCTAGAAGTTCAACGTTTAGAGCAGTCAGCATTCCATTTTATCCAAGAAATTGCTTTATTCTGGTCCTaGAGTCTTGCCAGTGAATAT +
Preference number: 4 (lower is better)
Translates to: LLEVQRLEQSAFHFIQEIALFWS*SLASEY
Trigger: ATATTCACTGGCAAGACTGCAGGACCAGAATAAAGC...AATTTCTTGGATAAAATGGAATGCTGACTGCTCTAAACGTTGAACTTCTAGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526336.1
ENST00000526745.6
CDS-3UTR GCA 90 bp AGCTGGCTAGTCAAACAATGCATGCTTTCTTTTGGTGGAAATATGCTTCTTACCAGTCTTTGGGGTGGATaGCTTTTAATAATACTTGTT +
Preference number: 4 (lower is better)
Translates to: SWLVKQCMLSFGGNMLLTSLWGG*LLIILV
Trigger: AACAAGTATTATTAAAAGGCATCCACCCCAAAGACT...GGTAAGAAGCATATTTCCACCAAAAGAAAGCATGCATTGTTTGACTAGCCAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR GCA 90 bp CAAAGTGACACATCCCTGAAGCATATGACTGTTTTCACTATAAGACATCAATTGTGGTCCCTTGGACTTTaGTTATTAATTCTTGCCTCT +
Preference number: 4 (lower is better)
Translates to: QSDTSLKHMTVFTIRHQLWSLGL*LLILAS
Trigger: AGAGGCAAGAATTAATAAGCAAAGTCCAAGGGACCA...CAATTGATGTCTTATAGTGAAAACAGTCATATGCTTCAGGGATGTGTCACTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524996.1
CDS-3UTR CCA 90 bp AGCTGGCTAGTCAAACAATGCATGCTTTCTTTTGGTGGAAATATGCTTCTTACCTTGAAGTCTTTGGGGTaGATGCCTTTTAATAATACT +
Preference number: 4 (lower is better)
Translates to: SWLVKQCMLSFGGNMLLTLKSLG*MPFNNT
Trigger: AGTATTATTAAAAGGCATCCACCCCAAAGACTTCAA...GGTAAGAAGCATATTTCCACCAAAAGAAAGCATGCATTGTTTGACTAGCCAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR CCA 90 bp TGGATTCAAAGTGACACATCCCTGAAGCATATGACTGTTTTCACTATAAGACATTTCTTTAACTCCATTTaGGCCTCTTGTCTTTTACGG +
Preference number: 4 (lower is better)
Translates to: WIQSDTSLKHMTVFTIRHFFNSI*ASCLLR
Trigger: CCGTAAAAGACAAGAGGCCCAAATGGAGTTAAAGAA...ATGTCTTATAGTGAAAACAGTCATATGCTTCAGGGATGTGTCACTTTGAATCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524996.1
CDS-3UTR CCA 90 bp CAGTTCATTAAGCTTGTGGAAGTGGGTTTCGTGAAATTGAATTTTAAGTCACATTTTGAAGGGTTTTCTTaGCTTTATGGTCCCTTGGAC +
Preference number: 4 (lower is better)
Translates to: QFIKLVEVGFVKLNFKSHFEGFS*LYGPLD
Trigger: GTCCAAGGGACCATAAAGCCAAGAAAACCCTTCAAA...ATGTGACTTAAAATTCAATTTCACGAAACCCACTTCCACAAGCTTAATGAACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR CCA 90 bp ATTCAAAGTGACACATCCCTGAAGCATATGACTGTTTTCACTATAAGACATCAATTTGAAGGGTTTTCTTaGCTTTATGGTCCCTTGGAC +
Preference number: 4 (lower is better)
Translates to: IQSDTSLKHMTVFTIRHQFEGFS*LYGPLD
Trigger: GTCCAAGGGACCATAAAGCCAAGAAAACCCTTCAAA...TTGATGTCTTATAGTGAAAACAGTCATATGCTTCAGGGATGTGTCACTTTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524996.1
CDS-3UTR TCA 90 bp ATTCAAAGTGACACATCCCTGAAGCATATGACTGTTTTCACTATAAGACATCAAATTCTTGCCTCTCCATaGAGACTTTTCTTTAACTCC +
Preference number: 4 (lower is better)
Translates to: IQSDTSLKHMTVFTIRHQILASP*RLFFNS
Trigger: GGAGTTAAAGAAAAGTCTTCATGGAGAGGCAAGAAT...TTGATGTCTTATAGTGAAAACAGTCATATGCTTCAGGGATGTGTCACTTTGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524996.1
CDS-3UTR CCA 90 bp TGGATTCAAAGTGACACATCCCTGAAGCATATGACTGTTTTCACTATAAGACATGGCTTTATGGTCCCTTaGACTTTGCTTATTAATTCT +
Preference number: 4 (lower is better)
Translates to: WIQSDTSLKHMTVFTIRHGFMVP*TLLINS
Trigger: AGAATTAATAAGCAAAGTCCAAGGGACCATAAAGCC...ATGTCTTATAGTGAAAACAGTCATATGCTTCAGGGATGTGTCACTTTGAATCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524996.1
CDS-3UTR CCA 90 bp CTAGAAGTTCAACGTTTAGAGCAGTCAGCATTCCATTTTATCCAAGAAATTCCTGGCTTTATGGTCCCTTaGACTTTGCTTATTAATTCT +
Preference number: 4 (lower is better)
Translates to: LEVQRLEQSAFHFIQEIPGFMVP*TLLINS
Trigger: AGAATTAATAAGCAAAGTCCAAGGGACCATAAAGCC...AGGAATTTCTTGGATAAAATGGAATGCTGACTGCTCTAAACGTTGAACTTCTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526745.6
CDS-3UTR GCA 90 bp CTAGAAGTTCAACGTTTAGAGCAGTCAGCATTCCATTTTATCCAAGAAATTCCTAGTCTTTGGGGTGGATaGCTTTTAATAATACTTGTT +
Preference number: 4 (lower is better)
Translates to: LEVQRLEQSAFHFIQEIPSLWGG*LLIILV
Trigger: AACAAGTATTATTAAAAGGCATCCACCCCAAAGACT...AGGAATTTCTTGGATAAAATGGAATGCTGACTGCTCTAAACGTTGAACTTCTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000526336.1
ENST00000526745.6
CDS-3UTR CCA 90 bp CATTTTGCCAATTTTCCAGGGACAGTAGTTATTCACTGCTTGATGTTTCAAAAAGGCTTTATGGTCCCTTaGACTTTGCTTATTAATTCT +
Preference number: 4 (lower is better)
Translates to: HFANFPGTVVIHCLMFQKGFMVP*TLLINS
Trigger: AGAATTAATAAGCAAAGTCCAAGGGACCATAAAGCC...TTTTTGAAACATCAAGCAGTGAATAACTACTGTCCCTGGAAAATTGGCAAAATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CAA 90 bp CTGCAGCTCTCTCAGCGGTGGGTCAGTCCTGCTGATGTGGGGATTTGGCCCACGTTTCAGCAGGCAATTTaGCGTCTTAGAAGTTCAAGA +
Preference number: 5 (lower is better)
Translates to: LQLSQRWVSPADVGIWPTFQQAI*RLRSSR
Trigger: TCTTGAACTTCTAAGACGCAAAATTGCCTGCTGAAA...CGTGGGCCAAATCCCCACATCAGCAGGACTGACCCACCGCTGAGAGAGCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526745.6
ENST00000529860.5
CDS GCA 90 bp CACACGGCCAGCCGAGGGAGTCTCTACCTCTTTGTTTTGCAAAGGTaGTACTTTGATCACCCTAAGGTGAGTCTTAGAGTGACTCAGGCC +
Preference number: 5 (lower is better)
Translates to: HTASRGSLYLFVLQR*YFDHPKVSLRVTQA
Trigger: GGCCTGAGTCACTCTAAGACTCACCTTAGGGTGATCAAAGTAGCACCTTTGCAAAACAAAGAGGTAGAGACTCCCTCGGCTGGCCGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216445.8
ENST00000422976.6
ENST00000526336.1
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534126.5
ENST00000534528.5
CDS-3UTR CAA 90 bp CTCTCTCAGCGGTGGGTCAGTCCTGCTGATGTGGGGATTTGGCCCACGGCACAGGATCATTTCCAGCACTaGCATCTTATGCAAATATTG +
Preference number: 5 (lower is better)
Translates to: LSQRWVSPADVGIWPTAQDHFQH*HLMQIL
Trigger: CAATATTTGCATAAGATGCAAGTGCTGGAAATGATC...CTGTGCCGTGGGCCAAATCCCCACATCAGCAGGACTGACCCACCGCTGAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526745.6
ENST00000529860.5
CDS-3UTR CAA 90 bp AAGTTCAAGACCTCCAGAGACATAGCCAGCTTTTCTGCAGCTCTCTCAGCGGTGATTTCAACTGTGGGTTaGCCCGGGACCTCTGTTCAA +
Preference number: 5 (lower is better)
Translates to: KFKTSRDIASFSAALSAVISTVG*PGTSVQ
Trigger: TTGAACAGAGGTCCCGGGCAAACCCACAGTTGAAAT...CACCGCTGAGAGAGCTGCAGAAAAGCTGGCTATGTCTCTGGAGGTCTTGAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529860.5
CDS-3UTR CAA 90 bp ATTGTCCTGGCTTCTCGCTGGCTCAGGAGTCTTCCTGAAGTAATTACTCGTGGCCATGGTCATCATTCCTaGGGGTGCTTTGAAGGGTTT +
Preference number: 5 (lower is better)
Translates to: IVLASRWLRSLPEVITRGHGHHS*GCFEGF
Trigger: AAACCCTTCAAAGCACCCCAAGGAATGATGACCATG...GCCACGAGTAATTACTTCAGGAAGACTCCTGAGCCAGCGAGAAGCCAGGACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CAA 90 bp TGGCTCAGGAGTCTTCCTGAAGTAATTACTCGTGGCAAGTCAATGGGTTCAAGCCTGTCCCTGGGCCTCTaGTTCATGAAGCCATGTTTC +
Preference number: 5 (lower is better)
Translates to: WLRSLPEVITRGKSMGSSLSLGL*FMKPCF
Trigger: GAAACATGGCTTCATGAACAAGAGGCCCAGGGACAG...GCTTGAACCCATTGACTTGCCACGAGTAATTACTTCAGGAAGACTCCTGAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
CDS TCA 90 bp GATCACCCTAAGGTGAGTCTTAGAGTGACTCAGGCCCATTTCATGTaGAAGACATTCAGAGGAAAGCTGCGAGGGAAGTGGTTTTGGGGT +
Preference number: 5 (lower is better)
Translates to: DHPKVSLRVTQAHFM*KTFRGKLRGKWFWG
Trigger: ACCCCAAAACCACTTCCCTCGCAGCTTTCCTCTGAATGTCTTTCACATGAAATGGGCCTGAGTCACTCTAAGACTCACCTTAGGGTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216445.8
ENST00000526336.1
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
CDS-3UTR CAA 90 bp AGATTTCATCAGGCAACATGGTTAGAAGGTCATGGTCATCATTCCTTGGGGTGCCTGTCCCTGGGCCTCTaGTTCATGAAGCCATGTTTC +
Preference number: 5 (lower is better)
Translates to: RFHQATWLEGHGHHSLGCLSLGL*FMKPCF
Trigger: GAAACATGGCTTCATGAACAAGAGGCCCAGGGACAG...GCACCCCAAGGAATGATGACCATGACCTTCTAACCATGTTGCCTGATGAAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CAA 90 bp CCTGAAGCATATGACTGTTTTCACTATAAGACATCAATTGTGGCCAGGCGCGGTACTATAAGACATCAATaGTGGCCAGGCGCGGTGGCT +
Preference number: 5 (lower is better)
Translates to: PEAYDCFHYKTSIVARRGTIRHQ*WPGAVA
Trigger: AGCCACCGCGCCTGGCCACAATTGATGTCTTATAGT...ACCGCGCCTGGCCACAATTGATGTCTTATAGTGAAAACAGTCATATGCTTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524996.1
CDS TCA 90 bp TCCTGCAGTCTTGCCAGTGAATATGAAGTCTTTTCTTCCAAATTCTaGTTGAATGCAAAGTCCACACGGCCAGCCGAGGGAGTCTCTACC +
Preference number: 5 (lower is better)
Translates to: SCSLASEYEVFSSKF*LNAKSTRPAEGVST
Trigger: GGTAGAGACTCCCTCGGCTGGCCGTGTGGACTTTGCATTCAATCAGAATTTGGAAGAAAAGACTTCATATTCACTGGCAAGACTGCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216445.8
ENST00000422976.6
ENST00000526336.1
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534126.5
ENST00000534528.5
CDS-3UTR CAA 90 bp ATTTGGCCCACGGCACAGCGATCGGGACCTCTGTTCAAGATTTCATCAGGCAACCTCTACCTCTTTGTTTaGCAAAGGTGCTACTTTGAT +
Preference number: 5 (lower is better)
Translates to: IWPTAQRSGPLFKISSGNLYLFV*QRCYFD
Trigger: ATCAAAGTAGCACCTTTGCAAAACAAAGAGGTAGAG...GTTGCCTGATGAAATCTTGAACAGAGGTCCCGATCGCTGTGCCGTGGGCCAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526745.6
CDS-3UTR CAA 90 bp AATTCTTTTGCCTCAGCCTTCGCATCAAGTAGCTGGGATTACAGACGAATGCCATTGGCACTCATGCCCTaGTGTAGTCCTCTTCTGCAT +
Preference number: 5 (lower is better)
Translates to: NSFASAFASSSWDYRRMPLALMP*CSPLLH
Trigger: ATGCAGAAGAGGACTACACAAGGGCATGAGTGCCAA...TGGCATTCGTCTGTAATCCCAGCTACTTGATGCGAAGGCTGAGGCAAAAGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS TCA 90 bp GCAGTCTTGCCAGTGAATATGAAGTCTTTTCTTCCAAATTCTGATTaGATGCAAAGTCCACACGGCCAGCCGAGGGAGTCTCTACCTCTT +
Preference number: 5 (lower is better)
Translates to: AVLPVNMKSFLPNSD*MQSPHGQPRESLPL
Trigger: AAGAGGTAGAGACTCCCTCGGCTGGCCGTGTGGACTTTGCATTCAATCAGAATTTGGAAGAAAAGACTTCATATTCACTGGCAAGACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216445.8
ENST00000422976.6
ENST00000526336.1
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534126.5
ENST00000534528.5
CDS GCA 90 bp GCTGTAGAATATCTTCCATACCAGTTTTCTTGTAAAGGTGGCAGCTaGCCTTCCAAGGCTTTATTCTGGTCCTGCAGTCTTGCCAGTGAA +
Preference number: 5 (lower is better)
Translates to: AVEYLPYQFSCKGGS*PSKALFWSCSLASE
Trigger: TTCACTGGCAAGACTGCAGGACCAGAATAAAGCCTTGGAAGGGCAGCTGCCACCTTTACAAGAAAACTGGTATGGAAGATATTCTACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216445.8
ENST00000422976.6
ENST00000526336.1
ENST00000526745.6
ENST00000530417.6
ENST00000534126.5
CDS GCA 90 bp CAAAATACATGTCTCTGGATGCAGTTTTCTTGTAAAGGTGGCAGCTaGCCTTCCAAGGCTTTATTCTGGTCCTGCAGTCTTGCCAGTGAA +
Preference number: 5 (lower is better)
Translates to: QNTCLWMQFSCKGGS*PSKALFWSCSLASE
Trigger: TTCACTGGCAAGACTGCAGGACCAGAATAAAGCCTTGGAAGGGCAGCTGCCACCTTTACAAGAAAACTGCATCCAGAGACATGTATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529860.5
ENST00000534528.5
CDS-3UTR CAA 90 bp GAACTCAGCAACCCACAGGAAAGTGAGACAATAAAATGGCTCTTGGTTAGCCCCGGAGTCTCTACCTCTTaGTTTTGCAAAGGTGCTACT +
Preference number: 5 (lower is better)
Translates to: ELSNPQESETIKWLLVSPGVSTS*FCKGAT
Trigger: AGTAGCACCTTTGCAAAACAAAGAGGTAGAGACTCC...GGGGCTAACCAAGAGCCATTTTATTGTCTCACTTTCCTGTGGGTTGCTGAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR CAA 90 bp TGGCTCAGGAGTCTTCCTGAAGTAATTACTCGTGGCAAGTCAATGGGTTCAAGCGGAGTCTCTACCTCTTaGTTTTGCAAAGGTGCTACT +
Preference number: 5 (lower is better)
Translates to: WLRSLPEVITRGKSMGSSGVSTS*FCKGAT
Trigger: AGTAGCACCTTTGCAAAACAAAGAGGTAGAGACTCC...GCTTGAACCCATTGACTTGCCACGAGTAATTACTTCAGGAAGACTCCTGAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000526336.1
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CAA 90 bp AGCGTCTTGTTTCTCCAAGTAGGAGCAGTGTCTCTTTCAGCAGGCAATTTTGCGCTCCATTTGGGCCTCTaGTCTTTTACGGATCATTTC +
Preference number: 5 (lower is better)
Translates to: SVLFLQVGAVSLSAGNFALHLGL*SFTDHF
Trigger: GAAATGATCCGTAAAAGACAAGAGGCCCAAATGGAG...CGCAAAATTGCCTGCTGAAAGAGACACTGCTCCTACTTGGAGAAACAAGACGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526745.6
ENST00000529860.5
CDS-3UTR CAA 90 bp TTGATCGAGCGTCTTGTTTCTCCAAGTAGGAGCAGTGTCTCTTTCAGCAGGCAACTCCATTTGGGCCTCTaGTCTTTTACGGATCATTTC +
Preference number: 5 (lower is better)
Translates to: LIERLVSPSRSSVSFSRQLHLGL*SFTDHF
Trigger: GAAATGATCCGTAAAAGACAAGAGGCCCAAATGGAG...TTGCCTGCTGAAAGAGACACTGCTCCTACTTGGAGAAACAAGACGCTCGATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526745.6
ENST00000529860.5
CDS-3UTR CAA 90 bp TGGCTCAGGAGTCTTCCTGAAGTAATTACTCGTGGCAAGTCAATGGGTTCAAGCCTCCATTTGGGCCTCTaGTCTTTTACGGATCATTTC +
Preference number: 5 (lower is better)
Translates to: WLRSLPEVITRGKSMGSSLHLGL*SFTDHF
Trigger: GAAATGATCCGTAAAAGACAAGAGGCCCAAATGGAG...GCTTGAACCCATTGACTTGCCACGAGTAATTACTTCAGGAAGACTCCTGAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CAA 90 bp CCTGAAGCATATGACTGTTTTCACTATAAGACATCAATTGTGGCCAGGCGCGGTCATGGTCATCATTCCTaGGGGTGCTTTGAAGGGTTT +
Preference number: 5 (lower is better)
Translates to: PEAYDCFHYKTSIVARRGHGHHS*GCFEGF
Trigger: AAACCCTTCAAAGCACCCCAAGGAATGATGACCATG...ACCGCGCCTGGCCACAATTGATGTCTTATAGTGAAAACAGTCATATGCTTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524996.1
CDS-3UTR CAA 90 bp AGATTTCATCAGGCAACATGGTTAGAAGGTCATGGTCATCATTCCTTGGGGTGCCATGGTCATCATTCCTaGGGGTGCTTTGAAGGGTTT +
Preference number: 5 (lower is better)
Translates to: RFHQATWLEGHGHHSLGCHGHHS*GCFEGF
Trigger: AAACCCTTCAAAGCACCCCAAGGAATGATGACCATG...GCACCCCAAGGAATGATGACCATGACCTTCTAACCATGTTGCCTGATGAAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CAA 90 bp CCTTGTGTAGTCCTCTTCTGCATTAACTCCAAGCTGGTCTATGACTTTAACCAACTGTCCCTGGGCCTCTaGTTCATGAAGCCATGTTTC +
Preference number: 5 (lower is better)
Translates to: PCVVLFCINSKLVYDFNQLSLGL*FMKPCF
Trigger: GAAACATGGCTTCATGAACAAGAGGCCCAGGGACAG...TTGGTTAAAGTCATAGACCAGCTTGGAGTTAATGCAGAAGAGGACTACACAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR CAA 90 bp AAGACTGGCAACTTCTGTTTCCTCCTCTTGAGACAATTGCTTTTGGGAGCCCTGGTTCAAGCAATTCTTTaGCCTCAGCCTTCGCATCAA +
Preference number: 5 (lower is better)
Translates to: KTGNFCFLLLRQLLLGALVQAIL*PQPSHQ
Trigger: TTGATGCGAAGGCTGAGGCAAAAGAATTGCTTGAAC...CAGGGCTCCCAAAAGCAATTGTCTCAAGAGGAGGAAACAGAAGTTGCCAGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR CAA 90 bp TTTCAACTGTGGGTTTGCCCGGGACCTCTGTTCAAGATTTCATCAGGCAACATGTCTAGTACCTTTGCTTaGTGCATTGTCCTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: FQLWVCPGPLFKISSGNMSSTFA*CIVLAS
Trigger: AGAAGCCAGGACAATGCACAAAGCAAAGGTACTAGA...CATGTTGCCTGATGAAATCTTGAACAGAGGTCCCGGGCAAACCCACAGTTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529860.5
CDS-3UTR CAA 90 bp CCGGGACCTCTGTTCAAGATTTCATCAGGCAACATGGTTAGAAGGTCATGGTCATCTAGTACCTTTGCTTaGTGCATTGTCCTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: PGPLFKISSGNMVRRSWSSSTFA*CIVLAS
Trigger: AGAAGCCAGGACAATGCACAAAGCAAAGGTACTAGA...TGACCATGACCTTCTAACCATGTTGCCTGATGAAATCTTGAACAGAGGTCCCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CAA 90 bp TCATCTTTCCCCTGCTCATCTGAGTCAGAGCTGGAACTGTCCCAGAGAAGCTGTTCTTACTTGAAGTCTTaGGGGTGGATGCCTTTTAAT +
Preference number: 5 (lower is better)
Translates to: SSFPCSSESELELSQRSCSYLKS*GWMPFN
Trigger: ATTAAAAGGCATCCACCCCAAAGACTTCAAGTAAGA...ACAGCTTCTCTGGGACAGTTCCAGCTCTGACTCAGATGAGCAGGGGAAAGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CAA 90 bp CGTGACATTATCTCACGTGTATCCTGTAGGCTCTCTGTTACGGTTAGCTCACTATTTCTAGTACCTGCTTaGCTTTGTGCATTGTCCTGG +
Preference number: 5 (lower is better)
Translates to: RDIISRVSCRLSVTVSSLFLVPA*LCALSW
Trigger: CCAGGACAATGCACAAAGCAAAGCAGGTACTAGAAA...TAGTGAGCTAACCGTAACAGAGAGCCTACAGGATACACGTGAGATAATGTCACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR CAA 90 bp CCTGAAGCATATGACTGTTTTCACTATAAGACATCAATTGTGGCCAGGCGCGGTCTCCATTTGGGCCTCTaGTCTTTTACGGATCATTTC +
Preference number: 5 (lower is better)
Translates to: PEAYDCFHYKTSIVARRGLHLGL*SFTDHF
Trigger: GAAATGATCCGTAAAAGACAAGAGGCCCAAATGGAG...ACCGCGCCTGGCCACAATTGATGTCTTATAGTGAAAACAGTCATATGCTTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524996.1
CDS-3UTR CAA 90 bp CCTGAAGCATATGACTGTTTTCACTATAAGACATCAATTGTGGCCAGGCGCGGTATTCCTTGGGGTGCTTaGAAGGGTTTTCTTGGCTTT +
Preference number: 5 (lower is better)
Translates to: PEAYDCFHYKTSIVARRGIPWGA*KGFLGF
Trigger: AAAGCCAAGAAAACCCTTCAAAGCACCCCAAGGAAT...ACCGCGCCTGGCCACAATTGATGTCTTATAGTGAAAACAGTCATATGCTTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524996.1
CDS-3UTR CAA 90 bp AAGATTTCATCAGGCAACATGGTTAGAAGGTCATGGTCATCATTCCTTGGGGTGCATGGTCATCATTCCTaGGGGTGCTTTGAAGGGTTT +
Preference number: 5 (lower is better)
Translates to: KISSGNMVRRSWSSFLGVHGHHS*GCFEGF
Trigger: AAACCCTTCAAAGCACCCCAAGGAATGATGACCATG...CACCCCAAGGAATGATGACCATGACCTTCTAACCATGTTGCCTGATGAAATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CAA 90 bp CCTGCTAGGAAGCAGAAATACCATACAAAGAAGACATGGTTTATGCCCTCATGTAGTGATCTTGGCTCATaGCAACCTCTATCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: PARKQKYHTKKTWFMPSCSDLGS*QPLSPG
Trigger: CCCAGGAGATAGAGGTTGCAATGAGCCAAGATCACT...ACATGAGGGCATAAACCATGTCTTCTTTGTATGGTATTTCTGCTTCCTAGCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR CAA 90 bp CCGGGACCTCTGTTCAAGATTTCATCAGGCAACATGGTTAGAAGGTCATGGTCATCTTTTCTAGTACCTTaGCTTTGTGCATTGTCCTGG +
Preference number: 5 (lower is better)
Translates to: PGPLFKISSGNMVRRSWSSFLVP*LCALSW
Trigger: CCAGGACAATGCACAAAGCAAAGGTACTAGAAAAGA...TGACCATGACCTTCTAACCATGTTGCCTGATGAAATCTTGAACAGAGGTCCCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CAA 90 bp TACTCGTGGCAAGTCAATGGGTTCAAGCTTCTAGAAGTTCAACGTTTAGAGCAGGGAGTCTCTACCTCTTaGTTTTGCAAAGGTGCTACT +
Preference number: 5 (lower is better)
Translates to: YSWQVNGFKLLEVQRLEQGVSTS*FCKGAT
Trigger: AGTAGCACCTTTGCAAAACAAAGAGGTAGAGACTCC...CTGCTCTAAACGTTGAACTTCTAGAAGCTTGAACCCATTGACTTGCCACGAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526336.1
ENST00000526745.6
CDS-3UTR CAA 90 bp TTTCATCAGGCAACATGGTTAGAAGGTCATGGTCATCATTCCTTGGGGTGCTTTGGAGTCTCTACCTCTTaGTTTTGCAAAGGTGCTACT +
Preference number: 5 (lower is better)
Translates to: FHQATWLEGHGHHSLGCFGVSTS*FCKGAT
Trigger: AGTAGCACCTTTGCAAAACAAAGAGGTAGAGACTCC...AAAGCACCCCAAGGAATGATGACCATGACCTTCTAACCATGTTGCCTGATGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CAA 90 bp CGTGACATTATCTCACGTGTATCCTGTAGGCTCTCTGTTACGGTTAGCTCACTAATGGTCCCTTGGACTTaGCTTATTAATTCTTGCCTC +
Preference number: 5 (lower is better)
Translates to: RDIISRVSCRLSVTVSSLMVPWT*LINSCL
Trigger: GAGGCAAGAATTAATAAGCAAAGTCCAAGGGACCAT...TAGTGAGCTAACCGTAACAGAGAGCCTACAGGATACACGTGAGATAATGTCACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR CAA 90 bp TCTCCAAGTAGGAGCAGTGTCTCTTTCAGCAGGCAATTTTGCGTCTTAGAAGTTATTCCTTGGGGTGCTTaGAAGGGTTTTCTTGGCTTT +
Preference number: 5 (lower is better)
Translates to: SPSRSSVSFSRQFCVLEVIPWGA*KGFLGF
Trigger: AAAGCCAAGAAAACCCTTCAAAGCACCCCAAGGAAT...AACTTCTAAGACGCAAAATTGCCTGCTGAAAGAGACACTGCTCCTACTTGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000526745.6
ENST00000529860.5
CDS-3UTR CAA 90 bp TTTAACTCCATTTGGGCCTCTTGTCTTTTACGGATCATTTCCAGCACTTGCATCCATGGTCATCATTCCTaGGGGTGCTTTGAAGGGTTT +
Preference number: 5 (lower is better)
Translates to: FNSIWASCLLRIISSTCIHGHHS*GCFEGF
Trigger: AAACCCTTCAAAGCACCCCAAGGAATGATGACCATG...GATGCAAGTGCTGGAAATGATCCGTAAAAGACAAGAGGCCCAAATGGAGTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CAA 90 bp AGATTTCATCAGGCAACATGGTTAGAAGGTCATGGTCATCATTCCTTGGGGTGCTCTTTTCTAGTACCTTaGCTTTGTGCATTGTCCTGG +
Preference number: 5 (lower is better)
Translates to: RFHQATWLEGHGHHSLGCSFLVP*LCALSW
Trigger: CCAGGACAATGCACAAAGCAAAGGTACTAGAAAAGA...GCACCCCAAGGAATGATGACCATGACCTTCTAACCATGTTGCCTGATGAAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CAA 90 bp AGCGTCTTGTTTCTCCAAGTAGGAGCAGTGTCTCTTTCAGCAGGCAATTTTGCGTTTCAGCAGGCAATTTaGCGTCTTAGAAGTTCAAGA +
Preference number: 5 (lower is better)
Translates to: SVLFLQVGAVSLSAGNFAFQQAI*RLRSSR
Trigger: TCTTGAACTTCTAAGACGCAAAATTGCCTGCTGAAA...CGCAAAATTGCCTGCTGAAAGAGACACTGCTCCTACTTGGAGAAACAAGACGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526745.6
ENST00000529860.5
CDS-3UTR CAA 90 bp TTCAAGATTTCATCAGGCAACATGGTTAGAAGGTCATGGTCATCATTCCTTGGGGGAGTCTCTACCTCTTaGTTTTGCAAAGGTGCTACT +
Preference number: 5 (lower is better)
Translates to: FKISSGNMVRRSWSSFLGGVSTS*FCKGAT
Trigger: AGTAGCACCTTTGCAAAACAAAGAGGTAGAGACTCC...CCCAAGGAATGATGACCATGACCTTCTAACCATGTTGCCTGATGAAATCTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CAA 90 bp TTCAAGATTTCATCAGGCAACATGGTTAGAAGGTCATGGTCATCATTCCTTGGGAATGGGTTCAAGCTTTaGAAGTCTTTGGGGTGGATG +
Preference number: 5 (lower is better)
Translates to: FKISSGNMVRRSWSSFLGNGFKL*KSLGWM
Trigger: CATCCACCCCAAAGACTTCAAAAGCTTGAACCCATT...CCCAAGGAATGATGACCATGACCTTCTAACCATGTTGCCTGATGAAATCTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529860.5
CDS-3UTR CAA 90 bp ATCCCTGAAGCATATGACTGTTTTCACTATAAGACATCAATTGTGGCCAGGCGCATGGTCCCTTGGACTTaGCTTATTAATTCTTGCCTC +
Preference number: 5 (lower is better)
Translates to: IPEAYDCFHYKTSIVARRMVPWT*LINSCL
Trigger: GAGGCAAGAATTAATAAGCAAAGTCCAAGGGACCAT...GCGCCTGGCCACAATTGATGTCTTATAGTGAAAACAGTCATATGCTTCAGGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524996.1
CDS-3UTR CAA 90 bp AAGATTTCATCAGGCAACATGGTTAGAAGGTCATGGTCATCATTCCTTGGGGTGATGGTCCCTTGGACTTaGCTTATTAATTCTTGCCTC +
Preference number: 5 (lower is better)
Translates to: KISSGNMVRRSWSSFLGVMVPWT*LINSCL
Trigger: GAGGCAAGAATTAATAAGCAAAGTCCAAGGGACCAT...CACCCCAAGGAATGATGACCATGACCTTCTAACCATGTTGCCTGATGAAATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CAA 90 bp TCTTTAACTCCATTTGGGCCTCTTGTCTTTTACGGATCATTTCCAGCACTTGCAATTCCTTGGGGTGCTTaGAAGGGTTTTCTTGGCTTT +
Preference number: 5 (lower is better)
Translates to: SLTPFGPLVFYGSFPALAIPWGA*KGFLGF
Trigger: AAAGCCAAGAAAACCCTTCAAAGCACCCCAAGGAAT...TGCAAGTGCTGGAAATGATCCGTAAAAGACAAGAGGCCCAAATGGAGTTAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CAA 90 bp CCGGGACCTCTGTTCAAGATTTCATCAGGCAACATGGTTAGAAGGTCATGGTCAAAAATTCTGTATTCTTaGAATTTCCGGGACCTCTGT +
Preference number: 5 (lower is better)
Translates to: PGPLFKISSGNMVRRSWSKILYS*NFRDLC
Trigger: ACAGAGGTCCCGGAAATTCAAAGAATACAGAATTTT...TGACCATGACCTTCTAACCATGTTGCCTGATGAAATCTTGAACAGAGGTCCCGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CAA 90 bp AAGACTGGCAACTTCTGTTTCCTCCTCTTGAGACAATTGCTTTTGGGAGCCCTGTCTGATGTGAATGCATaGAATGTCAAATTGAAGTGG +
Preference number: 5 (lower is better)
Translates to: KTGNFCFLLLRQLLLGALSDVNA*NVKLKW
Trigger: CCACTTCAATTTGACATTCAATGCATTCACATCAGA...CAGGGCTCCCAAAAGCAATTGTCTCAAGAGGAGGAAACAGAAGTTGCCAGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR CAA 90 bp GAACTCAGCAACCCACAGGAAAGTGAGACAATAAAATGGCTCTTGGTTAGCCCCATGAATAGGTTGGATTaGTTTATCCTCTCAAGGATC +
Preference number: 5 (lower is better)
Translates to: ELSNPQESETIKWLLVSPMNRLD*FILSRI
Trigger: GATCCTTGAGAGGATAAACAAATCCAACCTATTCAT...GGGGCTAACCAAGAGCCATTTTATTGTCTCACTTTCCTGTGGGTTGCTGAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR CAA 90 bp TTCAAGATTTCATCAGGCAACATGGTTAGAAGGTCATGGTCATCATTCCTTGGGTCTAGTACCTTTGCTTaGTGCATTGTCCTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: FKISSGNMVRRSWSSFLGSSTFA*CIVLAS
Trigger: AGAAGCCAGGACAATGCACAAAGCAAAGGTACTAGA...CCCAAGGAATGATGACCATGACCTTCTAACCATGTTGCCTGATGAAATCTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CAA 90 bp TTTCATCAGGCAACATGGTTAGAAGGTCATGGTCATCATTCCTTGGGGTGCTTTTCTTTTCTAGTACCTTaGCTTTGTGCATTGTCCTGG +
Preference number: 5 (lower is better)
Translates to: FHQATWLEGHGHHSLGCFSFLVP*LCALSW
Trigger: CCAGGACAATGCACAAAGCAAAGGTACTAGAAAAGA...AAAGCACCCCAAGGAATGATGACCATGACCTTCTAACCATGTTGCCTGATGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CAA 90 bp GTGAACAATATTGGAAATTTCAACTGTGGGTTTGCCCGGGACCTCTGTTCAAGACTCTACCTCTTTGTTTaGCAAAGGTGCTACTTTGAT +
Preference number: 5 (lower is better)
Translates to: VNNIGNFNCGFARDLCSRLYLFV*QRCYFD
Trigger: ATCAAAGTAGCACCTTTGCAAAACAAAGAGGTAGAG...TCTTGAACAGAGGTCCCGGGCAAACCCACAGTTGAAATTTCCAATATTGTTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529860.5
CDS-3UTR CAA 90 bp CTCCATTTGGGCCTCTTGTCTTTTACGGATCATTTCCAGCACTTGCATCTTATGCTCTACCTCTTTGTTTaGCAAAGGTGCTACTTTGAT +
Preference number: 5 (lower is better)
Translates to: LHLGLLSFTDHFQHLHLMLYLFV*QRCYFD
Trigger: ATCAAAGTAGCACCTTTGCAAAACAAAGAGGTAGAG...CATAAGATGCAAGTGCTGGAAATGATCCGTAAAAGACAAGAGGCCCAAATGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CAA 90 bp CTCAGGAGTCTTCCTGAAGTAATTACTCGTGGCAAGTCAATGGGTTCAAGCTTCGATCATTTCCAGCACTaGCATCTTATGCAAATATTG +
Preference number: 5 (lower is better)
Translates to: LRSLPEVITRGKSMGSSFDHFQH*HLMQIL
Trigger: CAATATTTGCATAAGATGCAAGTGCTGGAAATGATC...GAAGCTTGAACCCATTGACTTGCCACGAGTAATTACTTCAGGAAGACTCCTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526745.6
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CAA 90 bp CTGTTCAAGATTTCATCAGGCAACATGGTTAGAAGGTCATGGTCATCATTCCTTCTCCATTTGGGCCTCTaGTCTTTTACGGATCATTTC +
Preference number: 5 (lower is better)
Translates to: LFKISSGNMVRRSWSSFLLHLGL*SFTDHF
Trigger: GAAATGATCCGTAAAAGACAAGAGGCCCAAATGGAG...AAGGAATGATGACCATGACCTTCTAACCATGTTGCCTGATGAAATCTTGAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CAA 90 bp GAACAATATTGGAAATTTCAACTGTGGGTTTGCCCGGGACCTCTGTTCAAGATTATGGTCCCTTGGACTTaGCTTATTAATTCTTGCCTC +
Preference number: 5 (lower is better)
Translates to: EQYWKFQLWVCPGPLFKIMVPWT*LINSCL
Trigger: GAGGCAAGAATTAATAAGCAAAGTCCAAGGGACCAT...AATCTTGAACAGAGGTCCCGGGCAAACCCACAGTTGAAATTTCCAATATTGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529860.5
CDS-3UTR CAA 90 bp AGCTGGCTAGTCAAACAATGCATGCTTTCTTTTGGTGGAAATATGCTTCTTACCATTCCTTGGGGTGCTTaGAAGGGTTTTCTTGGCTTT +
Preference number: 5 (lower is better)
Translates to: SWLVKQCMLSFGGNMLLTIPWGA*KGFLGF
Trigger: AAAGCCAAGAAAACCCTTCAAAGCACCCCAAGGAAT...GGTAAGAAGCATATTTCCACCAAAAGAAAGCATGCATTGTTTGACTAGCCAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR CAA 90 bp AGATTTCATCAGGCAACATGGTTAGAAGGTCATGGTCATCATTCCTTGGGGTGCAAAATTCTGTATTCTTaGAATTTCCGGGACCTCTGT +
Preference number: 5 (lower is better)
Translates to: RFHQATWLEGHGHHSLGCKILYS*NFRDLC
Trigger: ACAGAGGTCCCGGAAATTCAAAGAATACAGAATTTT...GCACCCCAAGGAATGATGACCATGACCTTCTAACCATGTTGCCTGATGAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CAA 90 bp TTAATGATAAACTCTTTGCCAGCTGTCCTGCTAGGAAGCAGAAATACCATACAAGGTGAAGACGTGCCTTaGGCTCCACTAATTTTAGTG +
Preference number: 5 (lower is better)
Translates to: LMINSLPAVLLGSRNTIQGEDVP*APLILV
Trigger: CACTAAAATTAGTGGAGCCAAAGGCACGTCTTCACC...TTGTATGGTATTTCTGCTTCCTAGCAGGACAGCTGGCAAAGAGTTTATCATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR CAA 90 bp CCTTGTGTAGTCCTCTTCTGCATTAACTCCAAGCTGGTCTATGACTTTAACCAATTAATGATAAACTCTTaGCCAGCTGTCCTGCTAGGA +
Preference number: 5 (lower is better)
Translates to: PCVVLFCINSKLVYDFNQLMINS*PAVLLG
Trigger: TCCTAGCAGGACAGCTGGCAAAGAGTTTATCATTAA...TTGGTTAAAGTCATAGACCAGCTTGGAGTTAATGCAGAAGAGGACTACACAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR CAA 90 bp CGGGACCTCTGTTCAAGATTTCATCAGGCAACATGGTTAGAAGGTCATGGTCATTTAAATTCATCTTACTaGAAGTCTTTGGGGTGGATG +
Preference number: 5 (lower is better)
Translates to: RDLCSRFHQATWLEGHGHLNSSY*KSLGWM
Trigger: CATCCACCCCAAAGACTTCAAGTAAGATGAATTTAA...ATGACCATGACCTTCTAACCATGTTGCCTGATGAAATCTTGAACAGAGGTCCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526745.6
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CAA 90 bp CCTGCTAGGAAGCAGAAATACCATACAAAGAAGACATGGTTTATGCCCTCATGTCTCTACCTCTTTGTTTaGCAAAGGTGCTACTTTGAT +
Preference number: 5 (lower is better)
Translates to: PARKQKYHTKKTWFMPSCLYLFV*QRCYFD
Trigger: ATCAAAGTAGCACCTTTGCAAAACAAAGAGGTAGAG...ACATGAGGGCATAAACCATGTCTTCTTTGTATGGTATTTCTGCTTCCTAGCAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR CAA 90 bp AGTAGGAGCAGTGTCTCTTTCAGCAGGCAATTTTGCGTCTTAGAAGTTCAAGACGATCATTTCCAGCACTaGCATCTTATGCAAATATTG +
Preference number: 5 (lower is better)
Translates to: SRSSVSFSRQFCVLEVQDDHFQH*HLMQIL
Trigger: CAATATTTGCATAAGATGCAAGTGCTGGAAATGATC...GTCTTGAACTTCTAAGACGCAAAATTGCCTGCTGAAAGAGACACTGCTCCTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526745.6
ENST00000529860.5
CDS-3UTR CAA 90 bp GAATTTCCGGGACCTCTGTTCAAGATTTCATCAGGCAACATGGTTAGAAGGTCAGATCATTTCCAGCACTaGCATCTTATGCAAATATTG +
Preference number: 5 (lower is better)
Translates to: EFPGPLFKISSGNMVRRSDHFQH*HLMQIL
Trigger: CAATATTTGCATAAGATGCAAGTGCTGGAAATGATC...TGACCTTCTAACCATGTTGCCTGATGAAATCTTGAACAGAGGTCCCGGAAATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CAA 90 bp CTGTTCAAGATTTCATCAGGCAACATGGTTAGAAGGTCATGGTCATCATTCCTTATGGTCCCTTGGACTTaGCTTATTAATTCTTGCCTC +
Preference number: 5 (lower is better)
Translates to: LFKISSGNMVRRSWSSFLMVPWT*LINSCL
Trigger: GAGGCAAGAATTAATAAGCAAAGTCCAAGGGACCAT...AAGGAATGATGACCATGACCTTCTAACCATGTTGCCTGATGAAATCTTGAACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CAA 90 bp TATTCTTTGAATTTCCGGGACCTCTGTTCAAGATTTCATCAGGCAACATGGTTAATTCCTTGGGGTGCTTaGAAGGGTTTTCTTGGCTTT +
Preference number: 5 (lower is better)
Translates to: YSLNFRDLCSRFHQATWLIPWGA*KGFLGF
Trigger: AAAGCCAAGAAAACCCTTCAAAGCACCCCAAGGAAT...TAACCATGTTGCCTGATGAAATCTTGAACAGAGGTCCCGGAAATTCAAAGAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CAA 90 bp AATTACTCGTGGCAAGTCAATGGGTTCAAGCTTCTAGAAGTTCAACGTTTAGAGCTCTACCTCTTTGTTTaGCAAAGGTGCTACTTTGAT +
Preference number: 5 (lower is better)
Translates to: NYSWQVNGFKLLEVQRLELYLFV*QRCYFD
Trigger: ATCAAAGTAGCACCTTTGCAAAACAAAGAGGTAGAG...CTCTAAACGTTGAACTTCTAGAAGCTTGAACCCATTGACTTGCCACGAGTAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526336.1
ENST00000526745.6
CDS-3UTR CAA 90 bp CCTTGTGTAGTCCTCTTCTGCATTAACTCCAAGCTGGTCTATGACTTTAACCAAGATCATTTCCAGCACTaGCATCTTATGCAAATATTG +
Preference number: 5 (lower is better)
Translates to: PCVVLFCINSKLVYDFNQDHFQH*HLMQIL
Trigger: CAATATTTGCATAAGATGCAAGTGCTGGAAATGATC...TTGGTTAAAGTCATAGACCAGCTTGGAGTTAATGCAGAAGAGGACTACACAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR CAA 90 bp CAGTTCATTAAGCTTGTGGAAGTGGGTTTCGTGAAATTGAATTTTAAGTCACATCATGGTCATCATTCCTaGGGGTGCTTTGAAGGGTTT +
Preference number: 5 (lower is better)
Translates to: QFIKLVEVGFVKLNFKSHHGHHS*GCFEGF
Trigger: AAACCCTTCAAAGCACCCCAAGGAATGATGACCATG...ATGTGACTTAAAATTCAATTTCACGAAACCCACTTCCACAAGCTTAATGAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR CAA 90 bp TTACTCGTGGCAAGTCAATGGGTTCAAGCTTCTAGAAGTTCAACGTTTAGAGCATTAAATTCATCTTACTaGAAGTCTTTGGGGTGGATG +
Preference number: 5 (lower is better)
Translates to: LLVASQWVQASRSSTFRALNSSY*KSLGWM
Trigger: CATCCACCCCAAAGACTTCAAGTAAGATGAATTTAA...TGCTCTAAACGTTGAACTTCTAGAAGCTTGAACCCATTGACTTGCCACGAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526336.1
ENST00000526745.6
CDS-3UTR CAA 90 bp CAGTTCATTAAGCTTGTGGAAGTGGGTTTCGTGAAATTGAATTTTAAGTCACATAATGGGTTCAAGCTTTaGAAGTCTTTGGGGTGGATG +
Preference number: 5 (lower is better)
Translates to: QFIKLVEVGFVKLNFKSHNGFKL*KSLGWM
Trigger: CATCCACCCCAAAGACTTCAAAAGCTTGAACCCATT...ATGTGACTTAAAATTCAATTTCACGAAACCCACTTCCACAAGCTTAATGAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR CAA 90 bp CAGTTCATTAAGCTTGTGGAAGTGGGTTTCGTGAAATTGAATTTTAAGTCACATCTCCATTTGGGCCTCTaGTCTTTTACGGATCATTTC +
Preference number: 5 (lower is better)
Translates to: QFIKLVEVGFVKLNFKSHLHLGL*SFTDHF
Trigger: GAAATGATCCGTAAAAGACAAGAGGCCCAAATGGAG...ATGTGACTTAAAATTCAATTTCACGAAACCCACTTCCACAAGCTTAATGAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR CAA 90 bp AGCTGGCTAGTCAAACAATGCATGCTTTCTTTTGGTGGAAATATGCTTCTTACCGCATTGAATGTCAAATaGAAGTGGTGTTTTCCTCTA +
Preference number: 5 (lower is better)
Translates to: SWLVKQCMLSFGGNMLLTALNVK*KWCFPL
Trigger: TAGAGGAAAACACCACTTCAATTTGACATTCAATGC...GGTAAGAAGCATATTTCCACCAAAAGAAAGCATGCATTGTTTGACTAGCCAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR CAA 90 bp TCTAGAAAGCTGGCTAGTCAAACAATGCATGCTTTCTTTTGGTGGAAATATGCTTTTAAGCCTTCCAAATaGACCACAATAAGTGAGGAC +
Preference number: 5 (lower is better)
Translates to: SRKLASQTMHAFFWWKYAFKPSK*TTISED
Trigger: GTCCTCACTTATTGTGGTCAATTTGGAAGGCTTAAA...AGCATATTTCCACCAAAAGAAAGCATGCATTGTTTGACTAGCCAGCTTTCTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS-3UTR CAA 90 bp AGTAATTACTCGTGGCAAGTCAATGGGTTCAAGCTTCTAGAAGTTCAACGTTTATCTTACTTGAAGTCTTaGGGGTGGATGCCTTTTAAT +
Preference number: 5 (lower is better)
Translates to: SNYSWQVNGFKLLEVQRLSYLKS*GWMPFN
Trigger: ATTAAAAGGCATCCACCCCAAAGACTTCAAGTAAGA...TAAACGTTGAACTTCTAGAAGCTTGAACCCATTGACTTGCCACGAGTAATTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526336.1
ENST00000526745.6
CDS-3UTR CAA 90 bp TATTCTTTGAATTTCCGGGACCTCTGTTCAAGATTTCATCAGGCAACATGGTTATCTTACTTGAAGTCTTaGGGGTGGATGCCTTTTAAT +
Preference number: 5 (lower is better)
Translates to: YSLNFRDLCSRFHQATWLSYLKS*GWMPFN
Trigger: ATTAAAAGGCATCCACCCCAAAGACTTCAAGTAAGA...TAACCATGTTGCCTGATGAAATCTTGAACAGAGGTCCCGGAAATTCAAAGAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CAA 90 bp CTGTTCAAGATTTCATCAGGCAACATGGTTAGAAGGTCATGGTCATCATTCCTTTTAAATTCATCTTACTaGAAGTCTTTGGGGTGGATG +
Preference number: 5 (lower is better)
Translates to: LFKISSGNMVRRSWSSFLLNSSY*KSLGWM
Trigger: CATCCACCCCAAAGACTTCAAGTAAGATGAATTTAA...AAGGAATGATGACCATGACCTTCTAACCATGTTGCCTGATGAAATCTTGAACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526745.6
ENST00000530417.6
ENST00000534528.5
CDS-3UTR CAA 90 bp CTAGAAGTTCAACGTTTAGAGCAGTCAGCATTCCATTTTATCCAAGAAATTCCTTCTTACTTGAAGTCTTaGGGGTGGATGCCTTTTAAT +
Preference number: 5 (lower is better)
Translates to: LEVQRLEQSAFHFIQEIPSYLKS*GWMPFN
Trigger: ATTAAAAGGCATCCACCCCAAAGACTTCAAGTAAGA...AGGAATTTCTTGGATAAAATGGAATGCTGACTGCTCTAAACGTTGAACTTCTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000526336.1
ENST00000526745.6
CDS-3UTR CAA 90 bp CAGTTCATTAAGCTTGTGGAAGTGGGTTTCGTGAAATTGAATTTTAAGTCACATAAAATTCTGTATTCTTaGAATTTCCGGGACCTCTGT +
Preference number: 5 (lower is better)
Translates to: QFIKLVEVGFVKLNFKSHKILYS*NFRDLC
Trigger: ACAGAGGTCCCGGAAATTCAAAGAATACAGAATTTT...ATGTGACTTAAAATTCAATTTCACGAAACCCACTTCCACAAGCTTAATGAACTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216445.8
CDS CAA 72 bp CACACGGCCAGCCGAGGGAGTCTCTACCTCTTTGTTTaGCAAAGGTGCTACTTTGATCACCCTAAGGTGAGT +
Preference number: 6 (lower is better)
Translates to: HTASRGSLYLFV*QRCYFDHPKVS
Trigger: ACTCACCTTAGGGTGATCAAAGTAGCACCTTTGCAAAACAAAGAGGTAGAGACTCCCTCGGCTGGCCGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216445.8
ENST00000422976.6
ENST00000526336.1
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534126.5
ENST00000534528.5
CDS CAA 72 bp AAGTCCACACGGCCAGCCGAGGGAGTCTCTACCTCTTaGTTTTGCAAAGGTGCTACTTTGATCACCCTAAGG +
Preference number: 6 (lower is better)
Translates to: KSTRPAEGVSTS*FCKGATLITLR
Trigger: CCTTAGGGTGATCAAAGTAGCACCTTTGCAAAACAAAGAGGTAGAGACTCCCTCGGCTGGCCGTGTGGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216445.8
ENST00000422976.6
ENST00000526336.1
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534126.5
ENST00000534528.5
CDS CAA 90 bp TGCAAAGTCCACACGGCCAGCCGAGGGAGTCTCTACCTCTTTGTTTaGCAAAGGTGCTACTTTGATCACCCTAAGGTGAGTCTTAGAGTG +
Preference number: 6 (lower is better)
Translates to: CKVHTASRGSLYLFV*QRCYFDHPKVSLRV
Trigger: CACTCTAAGACTCACCTTAGGGTGATCAAAGTAGCACCTTTGCAAAACAAAGAGGTAGAGACTCCCTCGGCTGGCCGTGTGGACTTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216445.8
ENST00000422976.6
ENST00000526336.1
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534126.5
ENST00000534528.5
CDS GCA 72 bp GGTGGCAGCTGCCCTTCCAAGGCTTTATTCTGGTCCTaGAGTCTTGCCAGTGAATATGAAGTCTTTTCTTCC +
Preference number: 6 (lower is better)
Translates to: GGSCPSKALFWS*SLASEYEVFSS
Trigger: GGAAGAAAAGACTTCATATTCACTGGCAAGACTGCAGGACCAGAATAAAGCCTTGGAAGGGCAGCTGCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216445.8
ENST00000422976.6
ENST00000526336.1
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534126.5
ENST00000534528.5
CDS TCA 72 bp AAGGTGAGTCTTAGAGTGACTCAGGCCCATTTCATGTaGAAGACATTCAGAGGAAAGCTGCGAGGGAAGTGG +
Preference number: 6 (lower is better)
Translates to: KVSLRVTQAHFM*KTFRGKLRGKW
Trigger: CCACTTCCCTCGCAGCTTTCCTCTGAATGTCTTTCACATGAAATGGGCCTGAGTCACTCTAAGACTCACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216445.8
ENST00000422976.6
ENST00000526336.1
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534126.5
ENST00000534528.5
CDS GCA 72 bp TGTCTCTGGATGCAGTTTTCTTGTAAAGGTGGCAGCTaGCCTTCCAAGGCTTTATTCTGGTCCTGCAGTCTT +
Preference number: 6 (lower is better)
Translates to: CLWMQFSCKGGS*PSKALFWSCSL
Trigger: AAGACTGCAGGACCAGAATAAAGCCTTGGAAGGGCAGCTGCCACCTTTACAAGAAAACTGCATCCAGAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529860.5
ENST00000534528.5
CDS CCA 72 bp TGTCGGGACCTCTGTTCAAGATTTCATCAGGCAACATaGTTAGAAGGTCATGGTCATCATTCCTTGGGGTGC +
Preference number: 6 (lower is better)
Translates to: CRDLCSRFHQAT*LEGHGHHSLGC
Trigger: GCACCCCAAGGAATGATGACCATGACCTTCTAACCATGTTGCCTGATGAAATCTTGAACAGAGGTCCCGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422976.6
ENST00000524996.1
CDS GCA 72 bp AGCCGAGGGAGTCTCTACCTCTTTGTTTTGCAAAGGTaGTACTTTGATCACCCTAAGGTGAGTCTTAGAGTG +
Preference number: 6 (lower is better)
Translates to: SRGSLYLFVLQR*YFDHPKVSLRV
Trigger: CACTCTAAGACTCACCTTAGGGTGATCAAAGTAGCACCTTTGCAAAACAAAGAGGTAGAGACTCCCTCGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216445.8
ENST00000422976.6
ENST00000526336.1
ENST00000526745.6
ENST00000529860.5
ENST00000530417.6
ENST00000534126.5
ENST00000534528.5
CDS TCA 72 bp ATTATCTTAACACTTTGCAAAAGCGGCACTTATTTCTaGGAGCATACAGGAAAGGTGATTCTAACAGCATTA +
Preference number: 6 (lower is better)
Translates to: IILTLCKSGTYF*EHTGKVILTAL
Trigger: TAATGCTGTTAGAATCACCTTTCCTGTATGCTCTCAGAAATAAGTGCCGCTTTTGCAAAGTGTTAAGATAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532286.1