Pregenerated sensors for CBSL (Homo sapiens)
Ensembl gene IDs: ENSG00000274276Ensembl transcript IDs: ENST00000624691.3, ENST00000624921.1
Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TTCTCTGTGACGATGCTGAGGTCTACCAGGGCTCTGCGCTCTTGGTaGAGAGCGACCCTTAGGAATTCCCTCCACGCTCTTGAGCCTGGA | + |
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Preference number: 5 (lower is better) Translates to: FSVTMLRSTRALRSW*RATLRNSLHALEPG Trigger: TCCAGGCTCAAGAGCGTGGAGGGAATTCCTAAGGGTCGCTCTTCACCAAGAGCGCAGAGCCCTGGTAGACCTCAGCATCGTCACAGAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000624691.3 ENST00000624921.1 |
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| CDS GCA 72 bp | CCCCGGAGGCCTCAGACCACACCTCAGGTGACCCCCTaGGCACCCAGGACGAGGCCAGCCACAGACCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: PRRPQTTPQVTP*APRTRPATDPP Trigger: TGGAGGGTCTGTGGCTGGCCTCGTCCTGGGTGCGCAGGGGGTCACCTGAGGTGTGGTCTGAGGCCTCCGGGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000624691.3 |
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| CDS GCA 72 bp | ATTCCCTCCACGCTCTTGAGCCTGGAAACTGCGTCCTaGAAAGAAATGCCCTTCCCCGGAGGCCTCAGACCA | + |
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Preference number: 6 (lower is better) Translates to: IPSTLLSLETAS*KEMPFPGGLRP Trigger: TGGTCTGAGGCCTCCGGGGAAGGGCATTTCTTTGCAGGACGCAGTTTCCAGGCTCAAGAGCGTGGAGGGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000624691.3 |
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| CDS CAA 90 bp | TGCGCTCTTGGTGAAGAGCGACCCTTAGGAATTCCCTCCACGCTCTaGAGCCTGGAAACTGCGTCCTGCAAAGAAATGCCCTTCCCCGGA | + |
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Preference number: 6 (lower is better) Translates to: CALGEERPLGIPSTL*SLETASCKEMPFPG Trigger: TCCGGGGAAGGGCATTTCTTTGCAGGACGCAGTTTCCAGGCTCAAGAGCGTGGAGGGAATTCCTAAGGGTCGCTCTTCACCAAGAGCGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000624691.3 |
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| CDS TCA 72 bp | ACGATGCTGAGGTCTACCAGGGCTCTGCGCTCTTGGTaGAGAGCGACCCTTAGGAATTCCCTCCACGCTCTT | + |
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Preference number: 6 (lower is better) Translates to: TMLRSTRALRSW*RATLRNSLHAL Trigger: AAGAGCGTGGAGGGAATTCCTAAGGGTCGCTCTTCACCAAGAGCGCAGAGCCCTGGTAGACCTCAGCATCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000624691.3 ENST00000624921.1 |
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| CDS CAA 72 bp | GGTGAAGAGCGACCCTTAGGAATTCCCTCCACGCTCTaGAGCCTGGAAACTGCGTCCTGCAAAGAAATGCCC | + |
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Preference number: 6 (lower is better) Translates to: GEERPLGIPSTL*SLETASCKEMP Trigger: GGGCATTTCTTTGCAGGACGCAGTTTCCAGGCTCAAGAGCGTGGAGGGAATTCCTAAGGGTCGCTCTTCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000624691.3 |
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| CDS CAA 90 bp | TGCGCTCTTGGTGAAGAGCGACCCTTAGGAATTCCCTCCACGCTCTaGAGCCTGGAAACTGCGTCCTGCAAAGAAATGCCAGAGCTCACA | + |
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Preference number: 6 (lower is better) Translates to: CALGEERPLGIPSTL*SLETASCKEMPELT Trigger: TGTGAGCTCTGGCATTTCTTTGCAGGACGCAGTTTCCAGGCTCAAGAGCGTGGAGGGAATTCCTAAGGGTCGCTCTTCACCAAGAGCGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000624921.1 |
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| CDS GCA 72 bp | ATTCCCTCCACGCTCTTGAGCCTGGAAACTGCGTCCTaGAAAGAAATGCCAGAGCTCACACTTCAGGCCGAA | + |
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Preference number: 6 (lower is better) Translates to: IPSTLLSLETAS*KEMPELTLQAE Trigger: TTCGGCCTGAAGTGTGAGCTCTGGCATTTCTTTGCAGGACGCAGTTTCCAGGCTCAAGAGCGTGGAGGGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000624921.1 |
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| CDS CAA 72 bp | GGTGAAGAGCGACCCTTAGGAATTCCCTCCACGCTCTaGAGCCTGGAAACTGCGTCCTGCAAAGAAATGCCA | + |
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Preference number: 6 (lower is better) Translates to: GEERPLGIPSTL*SLETASCKEMP Trigger: TGGCATTTCTTTGCAGGACGCAGTTTCCAGGCTCAAGAGCGTGGAGGGAATTCCTAAGGGTCGCTCTTCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000624921.1 |
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| CDS GCA 72 bp | CTTAGGAATTCCCTCCACGCTCTTGAGCCTGGAAACTaGGTCCTGCAAAGAAATGCCAGAGCTCACACTTCA | + |
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Preference number: 6 (lower is better) Translates to: LRNSLHALEPGN*VLQRNARAHTS Trigger: TGAAGTGTGAGCTCTGGCATTTCTTTGCAGGACGCAGTTTCCAGGCTCAAGAGCGTGGAGGGAATTCCTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000624921.1 |
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