RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CBARP (Homo sapiens)

Ensembl gene IDs: ENSG00000099625

Ensembl transcript IDs: ENST00000215376.7, ENST00000382477.6, ENST00000589260.5, ENST00000590083.5, ENST00000591127.1, ENST00000648750.1, ENST00000650044.1

Found 682 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCGCGGCAGGTGGCTCGGTGTCGTCGCCTGCGCCGCGGCCCTCGATaGTGGCGTAGCCACTGTCCATCTGCAGCAGCCGGCGCGCCTCGC +
Preference number: 1 (lower is better)
Translates to: ARQVARCRRLRRGPR*WRSHCPSAAAGAPR
Trigger: GCGAGGCGCGCCGGCTGCTGCAGATGGACAGTGGCTACGCCAGCATCGAGGGCCGCGGCGCAGGCGACGACACCGAGCCACCTGCCGCGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
3UTR GCA 90 bp CGCGCCTCACGACGCCCAGCACCCGGCAAGCACCGGAAAGAGCAGTaGACACTTCGGCGGCGCGAGGGCGGCCGGGGCTCTGCGCCTGCG +
Preference number: 1 (lower is better)
Translates to: RASRRPAPGKHRKEQ*TLRRREGGRGSAPA
Trigger: CGCAGGCGCAGAGCCCCGGCCGCCCTCGCGCCGCCGAAGTGTGCACTGCTCTTTCCGGTGCTTGCCGGGTGCTGGGCGTCGTGAGGCGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
3UTR GCA 90 bp CGTGGCGCAGGAACTCGTGGAACAGCGCGTCCGTCTTCTCGTCGATaGTGTAGTCGCGGCGCGGGCGGCGGGGCCAGGCGCGCGGGCTGC +
Preference number: 1 (lower is better)
Translates to: RGAGTRGTARPSSRR*CSRGAGGGARRAGC
Trigger: GCAGCCCGCGCGCCTGGCCCCGCCGCCCGCGCCGCGACTACAGCATCGACGAGAAGACGGACGCGCTGTTCCACGAGTTCCTGCGCCACG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
3UTR GCA 90 bp CCACGTCTCTCCCGCCGCCGAGGCCCCGTGCGGCGCCGGAGAAGCTaGCAGAGAGATGGGCCCAGGACGCGGGACTTAGGCCGGGCTGTG +
Preference number: 1 (lower is better)
Translates to: PRLSRRRGPVRRRRS*QRDGPRTRDLGRAV
Trigger: CACAGCCCGGCCTAAGTCCCGCGTCCTGGGCCCATCTCTCTGGCAGCTTCTCCGGCGCCGCACGGGGCCTCGGCGGCGGGAGAGACGTGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
3UTR CCA 90 bp CATGCAGCTCAAGCGAGGCGCGCAGGCTCCACAGGTCGCGGTAGCTaGTCTGGGCCTGCTCGGGGCCCGCGTCCCGCTCGGCGTCCGGCT +
Preference number: 1 (lower is better)
Translates to: HAAQARRAGSTGRGS*SGPARGPRPARRPA
Trigger: AGCCGGACGCCGAGCGGGACGCGGGCCCCGAGCAGGCCCAGACCAGCTACCGCGACCTGTGGAGCCTGCGCGCCTCGCTTGAGCTGCATG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000591127.1
ENST00000648750.1
3UTR CCA 90 bp CGGCAGGTGGCTCGGTGTCGTCGCCTGCGCCGCGGCCCTCGATGCTaGCGTAGCCACTGTCCATCTGCAGCAGCCGGCGCGCCTCGCCGT +
Preference number: 1 (lower is better)
Translates to: RQVARCRRLRRGPRC*RSHCPSAAAGAPRR
Trigger: ACGGCGAGGCGCGCCGGCTGCTGCAGATGGACAGTGGCTACGCCAGCATCGAGGGCCGCGGCGCAGGCGACGACACCGAGCCACCTGCCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
3UTR GCA 90 bp CCGAGCTGTCGCCGCTGCGCACCGAGTCGCGGTCGTTGCCGCTGCTaGTGTGGTCCGAGGCGGCCGCATGCAGCTCAAGCGAGGCGCGCA +
Preference number: 1 (lower is better)
Translates to: PSCRRCAPSRGRCRC*CGPRRPHAAQARRA
Trigger: TGCGCGCCTCGCTTGAGCTGCATGCGGCCGCCTCGGACCACAGCAGCAGCGGCAACGACCGCGACTCGGTGCGCAGCGGCGACAGCTCGG
73% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
3UTR GCA 90 bp AGCCCGAGCTGTCGCCGCTGCGCACCGAGTCGCGGTCGTTGCCGCTaGTGCTGTGGTCCGAGGCGGCCGCATGCAGCTCAAGCGAGGCGC +
Preference number: 1 (lower is better)
Translates to: SPSCRRCAPSRGRCR*CCGPRRPHAAQARR
Trigger: GCGCCTCGCTTGAGCTGCATGCGGCCGCCTCGGACCACAGCAGCAGCGGCAACGACCGCGACTCGGTGCGCAGCGGCGACAGCTCGGGCT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
3UTR GCA 90 bp TGCGCGCGGGCGCGGTGTCGCGCGGCAGCCGGCGTGTCGTCGAAGTaGGGGTCGTGGCGCAGGAACTCGTGGAACAGCGCGTCCGTCTTC +
Preference number: 1 (lower is better)
Translates to: CARARCRAAAGVSSK*GSWRRNSWNSASVF
Trigger: GAAGACGGACGCGCTGTTCCACGAGTTCCTGCGCCACGACCCGCACTTCGACGACACGCCGGCTGCCGCGCGACACCGCGCCCGCGCGCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
3UTR CCA 90 bp CTGTCGCCGCTGCGCACCGAGTCGCGGTCGTTGCCGCTGCTGCTGTaGTCCGAGGCGGCCGCATGCAGCTCAAGCGAGGCGCGCAGGCTC +
Preference number: 1 (lower is better)
Translates to: LSPLRTESRSLPLLL*SEAAACSSSEARRL
Trigger: GAGCCTGCGCGCCTCGCTTGAGCTGCATGCGGCCGCCTCGGACCACAGCAGCAGCGGCAACGACCGCGACTCGGTGCGCAGCGGCGACAG
73% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
3UTR GCA 90 bp AGCCTGAGCCCGAGCTGTCGCCGCTGCGCACCGAGTCGCGGTCGTTaGCGCTGCTGCTGTGGTCCGAGGCGGCCGCATGCAGCTCAAGCG +
Preference number: 1 (lower is better)
Translates to: SLSPSCRRCAPSRGR*RCCCGPRRPHAAQA
Trigger: CGCTTGAGCTGCATGCGGCCGCCTCGGACCACAGCAGCAGCGGCAACGACCGCGACTCGGTGCGCAGCGGCGACAGCTCGGGCTCAGGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
3UTR TCA 90 bp CTCGGGTGGCGGGCCCTGCGACTAAGCGGCCGCCCCGTCCGGGACTaGGGGCGAGTGATCGTTGTCCTCAGGAGCCCGAAGCTGAGAGCC +
Preference number: 1 (lower is better)
Translates to: LGWRALRLSGRPVRD*GRVIVVLRSPKLRA
Trigger: GGCTCTCAGCTTCGGGCTCCTGAGGACAACGATCACTCGCCCTCAGTCCCGGACGGGGCGGCCGCTTAGTCGCAGGGCCCGCCACCCGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
3UTR CCA 90 bp GCCACGGCGTCGCCCGCCCGGGCAATGTACTGGATGAAGTCCTCCTaGGGGGCATCCCCCTCCTCCTGCTCCGTGCTCTCACTGGCTGCC +
Preference number: 1 (lower is better)
Translates to: ATASPARAMYWMKSS*GASPSSCSVLSLAA
Trigger: GGCAGCCAGTGAGAGCACGGAGCAGGAGGAGGGGGATGCCCCCCAGGAGGACTTCATCCAGTACATTGCCCGGGCGGGCGACGCCGTGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
3UTR CCA 90 bp GCGCGGTGTCGCGCGGCAGCCGGCGTGTCGTCGAAGTGCGGGTCGTaGCGCAGGAACTCGTGGAACAGCGCGTCCGTCTTCTCGTCGATG +
Preference number: 1 (lower is better)
Translates to: ARCRAAAGVSSKCGS*RRNSWNSASVFSSM
Trigger: CATCGACGAGAAGACGGACGCGCTGTTCCACGAGTTCCTGCGCCACGACCCGCACTTCGACGACACGCCGGCTGCCGCGCGACACCGCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
3UTR TCA 90 bp CGCCGCAGTGAGGTAAACGGTCTCGGAGGTCGGCAGTCACGGTGTTaGGCCGCCTCCCGGCCCAGGGCGGCGAACTCGTCTGCGACCGTT +
Preference number: 1 (lower is better)
Translates to: RRSEVNGLGGRQSRC*AASRPRAANSSATV
Trigger: AACGGTCGCAGACGAGTTCGCCGCCCTGGGCCGGGAGGCGGCTCAACACCGTGACTGCCGACCTCCGAGACCGTTTACCTCACTGCGGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
3UTR TCA 90 bp TTATTGCTCGGAGGCGGCGCGGGCTGCCGCCAGCACACGCCGCAGTaGGGTAAACGGTCTCGGAGGTCGGCAGTCACGGTGTTGAGCCGC +
Preference number: 1 (lower is better)
Translates to: LLLGGGAGCRQHTPQ*GKRSRRSAVTVLSR
Trigger: GCGGCTCAACACCGTGACTGCCGACCTCCGAGACCGTTTACCTCACTGCGGCGTGTGCTGGCGGCAGCCCGCGCCGCCTCCGAGCAATAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
3UTR CCA 90 bp TCCCCCTCCTCCTGCTCCGTGCTCTCACTGGCTGCCCGCTGCCGCTaGAAGTGGTGCCGCTTGGGGGAACCTCTCGTGTCCAGACTGGCT +
Preference number: 1 (lower is better)
Translates to: SPSSCSVLSLAARCR*KWCRLGEPLVSRLA
Trigger: AGCCAGTCTGGACACGAGAGGTTCCCCCAAGCGGCACCACTTCCAGCGGCAGCGGGCAGCCAGTGAGAGCACGGAGCAGGAGGAGGGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
3UTR CCA 90 bp CCCGGCCGGCCATCCCGCCTCTGGATCAGGGAGGGTGGACGCGGGTaGGACTTGGGACTCGGGCGGGCCTTGGAAGGTGAGAGCTTTAAA +
Preference number: 1 (lower is better)
Translates to: PGRPSRLWIREGGRG*DLGLGRALEGESFK
Trigger: TTTAAAGCTCTCACCTTCCAAGGCCCGCCCGAGTCCCAAGTCCCACCCGCGTCCACCCTCCCTGATCCAGAGGCGGGATGGCCGGCCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590083.5
3UTR CCA 90 bp AGCTTGGACCTGGCCGTCTGGGTTTTGTTCGCGTCTCAACGTGGATaGGGCGGCAGCGGGGCGGGCGCCGTTGACATGCGGAGGGCAGTG +
Preference number: 1 (lower is better)
Translates to: SLDLAVWVLFASQRG*GGSGAGAVDMRRAV
Trigger: CACTGCCCTCCGCATGTCAACGGCGCCCGCCCCGCTGCCGCCCCATCCACGTTGAGACGCGAACAAAACCCAGACGGCCAGGTCCAAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
3UTR CCA 90 bp AGGGGCGGCAGGTGCAGGTGCGTGAGCCGGGCATTCTTCAGGTGGTaGAAGTCCCCCTCCGTCAGTGTGTACCGGCGACCCTTGTCCTGC +
Preference number: 1 (lower is better)
Translates to: RGGRCRCVSRAFFRW*KSPSVSVYRRPLSC
Trigger: GCAGGACAAGGGTCGCCGGTACACACTGACGGAGGGGGACTTCCACCACCTGAAGAATGCCCGGCTCACGCACCTGCACCTGCCGCCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648750.1
3UTR GCA 90 bp TCCGTCAGTGTGTACCGGCGACCCTTGTCCTGCGTCTTGCGGCTCTaGTCAAACAGCGCCGCCTCATTGAAGGAGACCCGGCGGCCCGTG +
Preference number: 1 (lower is better)
Translates to: SVSVYRRPLSCVLRL*SNSAASLKETRRPV
Trigger: CACGGGCCGCCGGGTCTCCTTCAATGAGGCGGCGCTGTTTGAGCAGAGCCGCAAGACGCAGGACAAGGGTCGCCGGTACACACTGACGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648750.1
3UTR CCA 90 bp TTGAGGGGCGGCAGGTGCAGGTGCGTGAGCCGGGCATTCTTCAGGTaGTGGAAGTCCCCCTCCGTCAGTGTGTACCGGCGACCCTTGTCC +
Preference number: 1 (lower is better)
Translates to: LRGGRCRCVSRAFFR*WKSPSVSVYRRPLS
Trigger: GGACAAGGGTCGCCGGTACACACTGACGGAGGGGGACTTCCACCACCTGAAGAATGCCCGGCTCACGCACCTGCACCTGCCGCCCCTCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648750.1
3UTR TCA 90 bp CCTTGTCCTGCGTCTTGCGGCTCTGCTCAAACAGCGCCGCCTCATTaGAGGAGACCCGGCGGCCCGTGGAGCTGGTGGACAGGAAGCGTT +
Preference number: 1 (lower is better)
Translates to: PCPASCGSAQTAPPH*RRPGGPWSWWTGSV
Trigger: AACGCTTCCTGTCCACCAGCTCCACGGGCCGCCGGGTCTCCTTCAATGAGGCGGCGCTGTTTGAGCAGAGCCGCAAGACGCAGGACAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648750.1
3UTR TCA 90 bp TGCCCACCCATGCTGGATAACCAGCAGGAGGACAGTGCACAGACGTaGGGGTCACCCGCCATACCAGGGCTGCCCCAGGAACCCTGCTCT +
Preference number: 1 (lower is better)
Translates to: CPPMLDNQQEDSAQT*GSPAIPGLPQEPCS
Trigger: AGAGCAGGGTTCCTGGGGCAGCCCTGGTATGGCGGGTGACCCTCACGTCTGTGCACTGTCCTCCTGCTGGTTATCCAGCATGGGTGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590083.5
3UTR GCA 90 bp CCATCGCGGGATGGTGCAGACGCGGCGGGGACTCGGAGGGTGCCGTaGGGGCGAGGCCGCCCAAATTTGGCAATAAATAAAGCTTGGGAA +
Preference number: 1 (lower is better)
Translates to: PSRDGADAAGTRRVP*GRGRPNLAINKAWE
Trigger: TTCCCAAGCTTTATTTATTGCCAAATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCACCATCCCGCGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
3UTR GCA 90 bp GTTTTGCAGGGGATGCGTCTTGCATTGACCCTGAGCTGTGGCGCCTaGTTATTAAGCAGGGTGCCTCCATGCTGGACTGCAGACGGCGGG +
Preference number: 1 (lower is better)
Translates to: VLQGMRLALTLSCGA*LLSRVPPCWTADGG
Trigger: CCCGCCGTCTGCAGTCCAGCATGGAGGCACCCTGCTTAATAAGCAGGCGCCACAGCTCAGGGTCAATGCAAGACGCATCCCCTGCAAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590083.5
3UTR CCA 90 bp CCAGTGTGTTTTGCAGGGGATGCGTCTTGCATTGACCCTGAGCTGTaGCGCCTGCTTATTAAGCAGGGTGCCTCCATGCTGGACTGCAGA +
Preference number: 1 (lower is better)
Translates to: PVCFAGDASCIDPEL*RLLIKQGASMLDCR
Trigger: TCTGCAGTCCAGCATGGAGGCACCCTGCTTAATAAGCAGGCGCCACAGCTCAGGGTCAATGCAAGACGCATCCCCTGCAAAACACACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590083.5
3UTR CCA 90 bp GTGCCGTGCGGGCGAGGCCGCCCAAATTTGGCAATAAATAAAGCTTaGGAAGCTTGGACCTGGCCGTCTGGGTTTTGTTCGCGTCTCAAC +
Preference number: 1 (lower is better)
Translates to: VPCGRGRPNLAINKA*EAWTWPSGFCSRLN
Trigger: GTTGAGACGCGAACAAAACCCAGACGGCCAGGTCCAAGCTTCCCAAGCTTTATTTATTGCCAAATTTGGGCGGCCTCGCCCGCACGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
3UTR CCA 90 bp GGCCGCCCAAATTTGGCAATAAATAAAGCTTGGGAAGCTTGGACCTaGCCGTCTGGGTTTTGTTCGCGTCTCAACGTGGATGGGGCGGCA +
Preference number: 1 (lower is better)
Translates to: GRPNLAINKAWEAWT*PSGFCSRLNVDGAA
Trigger: TGCCGCCCCATCCACGTTGAGACGCGAACAAAACCCAGACGGCCAGGTCCAAGCTTCCCAAGCTTTATTTATTGCCAAATTTGGGCGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
3UTR CCA 90 bp GGGCGAGGCCGCCCAAATTTGGCAATAAATAAAGCTTGGGAAGCTTaGACCTGGCCGTCTGGGTTTTGTTCGCGTCTCAACGTGGATGGG +
Preference number: 1 (lower is better)
Translates to: GRGRPNLAINKAWEA*TWPSGFCSRLNVDG
Trigger: CCCATCCACGTTGAGACGCGAACAAAACCCAGACGGCCAGGTCCAAGCTTCCCAAGCTTTATTTATTGCCAAATTTGGGCGGCCTCGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
3UTR-3UTR GCA 90 bp GGTCGCGGTAGCTGGTCTGGGCCTGCTCGGGGCCCGCGTCCCGCTCGGCGTCCGTCCAGTGGCGGCTGCTaGTGCTCAGGCCCCGCGCTG +
Preference number: 2 (lower is better)
Translates to: GRGSWSGPARGPRPARRPSSGGC*CSGPAL
Trigger: CAGCGCGGGGCCTGAGCAGCAGCAGCCGCCACTGGA...CGGACGCCGAGCGGGACGCGGGCCCCGAGCAGGCCCAGACCAGCTACCGCGACC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000591127.1
ENST00000648750.1
3UTR-3UTR CCA 90 bp CAGGTCGCGGTAGCTGGTCTGGGCCTGCTCGGGGCCCGCGTCCCGCTCGGCGTCTGGCCCCATCCAGGCTaGCATGGCGGCGCAGGCGGG +
Preference number: 2 (lower is better)
Translates to: QVAVAGLGLLGARVPLGVWPHPG*HGGAGG
Trigger: CCCGCCTGCGCCGCCATGCCAGCCTGGATGGGGCCA...GACGCCGAGCGGGACGCGGGCCCCGAGCAGGCCCAGACCAGCTACCGCGACCTG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
3UTR-3UTR CCA 90 bp CGTCCCGCTCGGCGTCCGGCTCCAGTGGCGGCTGCTGCTGCTCAGGCCCCGCGCGGCGTCCGGCTCCAGTaGCGGCTGCTGCTGCTCAGG +
Preference number: 2 (lower is better)
Translates to: RPARRPAPVAAAAAQAPRGVRLQ*RLLLLR
Trigger: CCTGAGCAGCAGCAGCCGCCACTGGAGCCGGACGCC...GCGCGGGGCCTGAGCAGCAGCAGCCGCCACTGGAGCCGGACGCCGAGCGGGACG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000591127.1
ENST00000648750.1
3UTR-3UTR CCA 90 bp GGATGGTGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCGGAGAGGTGGCCGGGTaGGGCGTGGTGGCTGAGCTG +
Preference number: 2 (lower is better)
Translates to: GWCRRGGDSEGAVRARPPGEVAG*GVVAEL
Trigger: CAGCTCAGCCACCACGCCCCACCCGGCCACCTCTCC...GGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCACCATCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648750.1
3UTR-3UTR GCA 90 bp CGCGGTAGCTGGTCTGGGCCTGCTCGGGGCCCGCGTCCCGCTCGGCGTCCGGCTTCACTGGCTGCCCGCTaGCGCTGGAAGTGGTGCCGC +
Preference number: 2 (lower is better)
Translates to: RGSWSGPARGPRPARRPASLAAR*RWKWCR
Trigger: GCGGCACCACTTCCAGCGGCAGCGGGCAGCCAGTGA...AGCCGGACGCCGAGCGGGACGCGGGCCCCGAGCAGGCCCAGACCAGCTACCGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
3UTR-3UTR GCA 90 bp GGCTCCTCCTCGATGACGGGGATGGCGGGGTCGTCGCCGGCGCCGCCCAGGGTGTCCAGTGGCGGCTGCTaGTGCTCAGGCCCCGCGCTG +
Preference number: 2 (lower is better)
Translates to: GSSSMTGMAGSSPAPPRVSSGGC*CSGPAL
Trigger: CAGCGCGGGGCCTGAGCAGCAGCAGCCGCCACTGGA...CACCCTGGGCGGCGCCGGCGACGACCCCGCCATCCCCGTCATCGAGGAGGAGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
3UTR-3UTR GCA 90 bp CGCCATCGCGGGATGGTGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGGTCGTTGCCGCTGCTaGTGTGGTCCGAGGCGGCCG +
Preference number: 2 (lower is better)
Translates to: RHRGMVQTRRGLGGCRAGGRCRC*CGPRRP
Trigger: CGGCCGCCTCGGACCACAGCAGCAGCGGCAACGACC...GCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCACCATCCCGCGATGGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
3UTR-3UTR CCA 90 bp GGCGCGCAGGCTCCACAGGTCGCGGTAGCTGGTCTGGGCCTGCTCGGGGCCCGCGAGTCTGCCCAGCCTTaGGAGCATGGGCGGGGCGGG +
Preference number: 2 (lower is better)
Translates to: GAQAPQVAVAGLGLLGARESAQP*EHGRGG
Trigger: CCCGCCCCGCCCATGCTCCCAAGGCTGGGCAGACTC...GCGGGCCCCGAGCAGGCCCAGACCAGCTACCGCGACCTGTGGAGCCTGCGCGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590083.5
3UTR-3UTR TCA 90 bp AGTGGGCTGCGCGACCCTCGGGTGGCGGGCCCTGCGACTAAGCGGCCGCCCCGTGGCGGCGCAGGCGGGTaGGGAACTGCAGAACGGTAC +
Preference number: 2 (lower is better)
Translates to: SGLRDPRVAGPATKRPPRGGAGG*GTAERY
Trigger: GTACCGTTCTGCAGTTCCTCACCCGCCTGCGCCGCC...ACGGGGCGGCCGCTTAGTCGCAGGGCCCGCCACCCGAGGGTCGCGCAGCCCACT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648750.1
3UTR-3UTR GCA 90 bp GGCTCCACAGGTCGCGGTAGCTGGTCTGGGCCTGCTCGGGGCCCGCGTCCCGCTCTGCAGAACGGTACCTaGCCCGGATCCCGGGCCCGC +
Preference number: 2 (lower is better)
Translates to: GSTGRGSWSGPARGPRPALQNGT*PGSRAR
Trigger: GCGGGCCCGGGATCCGGGGCAGGTACCGTTCTGCAG...AGCGGGACGCGGGCCCCGAGCAGGCCCAGACCAGCTACCGCGACCTGTGGAGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
3UTR-3UTR GCA 90 bp GCGGTAGCTGGTCTGGGCCTGCTCGGGGCCCGCGTCCCGCTCGGCGTCCGGCTCGGCGGCAGGTGCAGGTaGGTGAGCCGGGCATTCTTC +
Preference number: 2 (lower is better)
Translates to: AVAGLGLLGARVPLGVRLGGRCR*VSRAFF
Trigger: GAAGAATGCCCGGCTCACGCACCTGCACCTGCCGCC...GAGCCGGACGCCGAGCGGGACGCGGGCCCCGAGCAGGCCCAGACCAGCTACCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648750.1
3UTR-3UTR CCA 90 bp CCCGGCCGGCCATCCCGCCTCTGGATCAGGGAGGGTGGACGCGGGTGGGACTTGCCAGCCTTGGGAGCATaGGCGGGGCGGGGGTGGGAG +
Preference number: 2 (lower is better)
Translates to: PGRPSRLWIREGGRGWDLPALGA*AGRGWE
Trigger: CTCCCACCCCCGCCCCGCCCATGCTCCCAAGGCTGG...CAAGTCCCACCCGCGTCCACCCTCCCTGATCCAGAGGCGGGATGGCCGGCCGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590083.5
3UTR-3UTR CCA 90 bp CGGCGCGGTTATTGCTCGGAGGCGGCGCGGGCTGCCGCCAGCACACGCCGCAGTCTCCATCGGGCCCAGTaGGCTGCGCGACCCTCGGGT +
Preference number: 2 (lower is better)
Translates to: RRGYCSEAARAAASTRRSLHRAQ*AARPSG
Trigger: ACCCGAGGGTCGCGCAGCCCACTGGGCCCGATGGAG...ACTGCGGCGTGTGCTGGCGGCAGCCCGCGCCGCCTCCGAGCAATAACCGCGCCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
3UTR-3UTR CCA 90 bp GCCATCGCGGGATGGTGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGGTTCGCGTCTCAACGTaGATGGGGCGGCAGCGGGGC +
Preference number: 2 (lower is better)
Translates to: AIAGWCRRGGDSEGAVRAVRVST*MGRQRG
Trigger: GCCCCGCTGCCGCCCCATCCACGTTGAGACGCGAAC...CGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCACCATCCCGCGATGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
3UTR-3UTR CCA 90 bp CGCCATCGCGGGATGGTGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCAACGCCATCGCGGGATaGTGCAGACGCGGCGGGGAC +
Preference number: 2 (lower is better)
Translates to: RHRGMVQTRRGLGGCRAGNAIAG*CRRGGD
Trigger: GTCCCCGCCGCGTCTGCACCATCCCGCGATGGCGTT...GCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCACCATCCCGCGATGGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
3UTR-3UTR CCA 90 bp CAGGTCGCGGTAGCTGGTCTGGGCCTGCTCGGGGCCCGCGTCCCGCTCGGCGTCAGACCCGGCGGCCCGTaGAGCTGGTGGACAGGAAGC +
Preference number: 2 (lower is better)
Translates to: QVAVAGLGLLGARVPLGVRPGGP*SWWTGS
Trigger: GCTTCCTGTCCACCAGCTCCACGGGCCGCCGGGTCT...GACGCCGAGCGGGACGCGGGCCCCGAGCAGGCCCAGACCAGCTACCGCGACCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648750.1
3UTR-3UTR GCA 90 bp CGCCATCGCGGGATGGTGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCCGAGGGGCTGATCTCTaGGAAGTCAGTGGCGCCCGC +
Preference number: 2 (lower is better)
Translates to: RHRGMVQTRRGLGGCRAGRGADL*EVSGAR
Trigger: GCGGGCGCCACTGACTTCGCAGAGATCAGCCCCTCG...GCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCACCATCCCGCGATGGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648750.1
3UTR-3UTR GCA 90 bp GGTCGCGGTAGCTGGTCTGGGCCTGCTCGGGGCCCGCGTCCCGCTCGGCGTCCGGCCCTCCAGCCTTGGTaGTCCTGGTACCGGCATCCA +
Preference number: 2 (lower is better)
Translates to: GRGSWSGPARGPRPARRPALQPW*SWYRHP
Trigger: TGGATGCCGGTACCAGGAGCACCAAGGCTGGAGGGC...CGGACGCCGAGCGGGACGCGGGCCCCGAGCAGGCCCAGACCAGCTACCGCGACC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
3UTR-3UTR GCA 90 bp GGCTCCACAGGTCGCGGTAGCTGGTCTGGGCCTGCTCGGGGCCCGCGTCCCGCTCGTGTCCAGACTGGCTaGCCGCTGGCTGGGCTCCAG +
Preference number: 2 (lower is better)
Translates to: GSTGRGSWSGPARGPRPARVQTG*PLAGLQ
Trigger: CTGGAGCCCAGCCAGCGGGCAGCCAGTCTGGACACG...AGCGGGACGCGGGCCCCGAGCAGGCCCAGACCAGCTACCGCGACCTGTGGAGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
3UTR-3UTR GCA 90 bp AGTGGGCTGCGCGACCCTCGGGTGGCGGGCCCTGCGACTAAGCGGCCGCCCCGTCGTGCTCTCACTGGCTaGCCGCTGCCGCTGGAAGTG +
Preference number: 2 (lower is better)
Translates to: SGLRDPRVAGPATKRPPRRALTG*PLPLEV
Trigger: CACTTCCAGCGGCAGCGGGCAGCCAGTGAGAGCACG...ACGGGGCGGCCGCTTAGTCGCAGGGCCCGCCACCCGAGGGTCGCGCAGCCCACT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648750.1
3UTR-3UTR GCA 90 bp CAGGTCGCGGTAGCTGGTCTGGGCCTGCTCGGGGCCCGCGTCCCGCTCGGCGTCCCTCCTCCTGCTCCGTaGTCTCACTGGCTGCCCGCT +
Preference number: 2 (lower is better)
Translates to: QVAVAGLGLLGARVPLGVPPPAP*SHWLPA
Trigger: AGCGGGCAGCCAGTGAGAGCACGGAGCAGGAGGAGG...GACGCCGAGCGGGACGCGGGCCCCGAGCAGGCCCAGACCAGCTACCGCGACCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
3UTR-3UTR GCA 90 bp CGTCCGTCTTCTCGTCGATGCTGTAGTCGCGGCGCGGGCGGCGGGGCCAGGCGCCCGAGTCGCGGTCGTTaGCGCTGCTGCTGTGGTCCG +
Preference number: 2 (lower is better)
Translates to: RPSSRRCCSRGAGGGARRPSRGR*RCCCGP
Trigger: CGGACCACAGCAGCAGCGGCAACGACCGCGACTCGG...GCGCCTGGCCCCGCCGCCCGCGCCGCGACTACAGCATCGACGAGAAGACGGACG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
3UTR-3UTR GCA 90 bp GGATGGTGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCCGGCGACCCTTGTCCTaGGTCTTGCGGCTCTGCTCA +
Preference number: 2 (lower is better)
Translates to: GWCRRGGDSEGAVRARPPRRPLS*VLRLCS
Trigger: TGAGCAGAGCCGCAAGACGCAGGACAAGGGTCGCCG...GGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCACCATCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648750.1
3UTR-3UTR CCA 90 bp GCCATCGCGGGATGGTGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGCGGGCCCTCCAGCCTTaGTGCTCCTGGTACCGGCAT +
Preference number: 2 (lower is better)
Translates to: AIAGWCRRGGDSEGAVRARALQP*CSWYRH
Trigger: ATGCCGGTACCAGGAGCACCAAGGCTGGAGGGCCCG...CGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCACCATCCCGCGATGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648750.1
3UTR-3UTR CCA 90 bp CAGGTCGCGGTAGCTGGTCTGGGCCTGCTCGGGGCCCGCGTCCCGCTCGGCGTCCTCTCGTGTCCAGACTaGCTGCCCGCTGGCTGGGCT +
Preference number: 2 (lower is better)
Translates to: QVAVAGLGLLGARVPLGVLSCPD*LPAGWA
Trigger: AGCCCAGCCAGCGGGCAGCCAGTCTGGACACGAGAG...GACGCCGAGCGGGACGCGGGCCCCGAGCAGGCCCAGACCAGCTACCGCGACCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
3UTR-3UTR CCA 90 bp CGAACTCGTCTGCGACCGTTAGCGCCCCGCGGCCCCCGCCCGGGCGAGCTCGCGCCGCAGGGGATGGACTaGACGCGGTTGAGTCCAGCT +
Preference number: 2 (lower is better)
Translates to: RTRLRPLAPRGPRPGELAPQGMD*TRLSPA
Trigger: AGCTGGACTCAACCGCGTCCAGTCCATCCCCTGCGG...CGCGAGCTCGCCCGGGCGGGGGCCGCGGGGCGCTAACGGTCGCAGACGAGTTCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590083.5
3UTR CAA 90 bp GAGCCTGAGCCCGAGCTGTCGCCGCTGCGCACCGAGTCGCGGTCGTaGCCGCTGCTGCTGTGGTCCGAGGCGGCCGCATGCAGCTCAAGC +
Preference number: 2 (lower is better)
Translates to: EPEPELSPLRTESRS*PLLLWSEAAACSSS
Trigger: GCTTGAGCTGCATGCGGCCGCCTCGGACCACAGCAGCAGCGGCAACGACCGCGACTCGGTGCGCAGCGGCGACAGCTCGGGCTCAGGCTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
3UTR-3UTR TCA 90 bp CGCGGCAGGTGGCTCGGTGTCGTCGCCTGCGCCGCGGCCCTCGATGCTGGCGTATGGACTGGACGCGGTTaGGTCCAGCTCAGCCCCTGC +
Preference number: 2 (lower is better)
Translates to: RGRWLGVVACAAALDAGVWTGRG*VQLSPC
Trigger: GCAGGGGCTGAGCTGGACTCAACCGCGTCCAGTCCA...TACGCCAGCATCGAGGGCCGCGGCGCAGGCGACGACACCGAGCCACCTGCCGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590083.5
3UTR-3UTR TCA 90 bp GCCATCGCGGGATGGTGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGTCAGGAGCCCGAAGCTaGGAGCCGTTCACGCCCCTT +
Preference number: 2 (lower is better)
Translates to: AIAGWCRRGGDSEGAVRASGARS*EPFTPL
Trigger: AAGGGGCGTGAACGGCTCTCAGCTTCGGGCTCCTGA...CGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCACCATCCCGCGATGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
3UTR-3UTR TCA 90 bp AGTGGGCTGCGCGACCCTCGGGTGGCGGGCCCTGCGACTAAGCGGCCGCCCCGTGCAGGTGCAGGTGCGTaGGCCGGGCATTCTTCAGGT +
Preference number: 2 (lower is better)
Translates to: SGLRDPRVAGPATKRPPRAGAGA*AGHSSG
Trigger: ACCTGAAGAATGCCCGGCTCACGCACCTGCACCTGC...ACGGGGCGGCCGCTTAGTCGCAGGGCCCGCCACCCGAGGGTCGCGCAGCCCACT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648750.1
3UTR-3UTR GCA 90 bp GGCGCGCAGGCTCCACAGGTCGCGGTAGCTGGTCTGGGCCTGCTCGGGGCCCGCAGGCGGGTGAGGAACTaGAGAACGGTACCTGCCCCG +
Preference number: 2 (lower is better)
Translates to: GAQAPQVAVAGLGLLGARRRVRN*RTVPAP
Trigger: CGGGGCAGGTACCGTTCTGCAGTTCCTCACCCGCCT...GCGGGCCCCGAGCAGGCCCAGACCAGCTACCGCGACCTGTGGAGCCTGCGCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
3UTR-3UTR GCA 90 bp CTCCCGCTGCCTCGGCCGCCTCTGCCGAGAGCAGGGGGCGGGCTGGCCAGAAAGCGTGCTCTCACTGGCTaGCCGCTGCCGCTGGAAGTG +
Preference number: 2 (lower is better)
Translates to: LPLPRPPLPRAGGGLARKRALTG*PLPLEV
Trigger: CACTTCCAGCGGCAGCGGGCAGCCAGTGAGAGCACG...CTTTCTGGCCAGCCCGCCCCCTGCTCTCGGCAGAGGCGGCCGAGGCAGCGGGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591127.1
3UTR-3UTR GCA 90 bp GGCGAGGCGCGGCGGAAAGAGTCTCTCGTCGAGGCCAGCCGCCAGCTTGTCCAGAGTGGCGGCTGCTGCTaGTCAGGCCCCGCGCTGCCC +
Preference number: 2 (lower is better)
Translates to: GEARRKESLVEASRQLVQSGGCC*SGPALP
Trigger: GGGCAGCGCGGGGCCTGAGCAGCAGCAGCCGCCACT...CTGGACAAGCTGGCGGCTGGCCTCGACGAGAGACTCTTTCCGCCGCGCCTCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
3UTR-3UTR GCA 90 bp CTGCGCCGCGGCCCTCGATGCTGGCGTAGCCACTGTCCATCTGCAGCAGCCGGCCCGAGCTGTCGCCGCTaGGCACCGAGTCGCGGTCGT +
Preference number: 2 (lower is better)
Translates to: LRRGPRCWRSHCPSAAAGPSCRR*APSRGR
Trigger: ACGACCGCGACTCGGTGCGCAGCGGCGACAGCTCGG...GCCGGCTGCTGCAGATGGACAGTGGCTACGCCAGCATCGAGGGCCGCGGCGCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
3UTR-3UTR CCA 90 bp TGGCAGGGCGGAGCTGGGGCCCACAGAGCGGCCGGTGAGGGCCTTCCCCGGGGGGGAAGTGGTGCCGCTTaGGGGAACCTCTCGTGTCCA +
Preference number: 2 (lower is better)
Translates to: WQGGAGAHRAAGEGLPRGGSGAA*GNLSCP
Trigger: TGGACACGAGAGGTTCCCCCAAGCGGCACCACTTCC...CCCCCGGGGAAGGCCCTCACCGGCCGCTCTGTGGGCCCCAGCTCCGCCCTGCCA
72% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000648750.1
3UTR-3UTR CCA 90 bp AGTGGGCTGCGCGACCCTCGGGTGGCGGGCCCTGCGACTAAGCGGCCGCCCCGTTGGATGAAGTCCTCCTaGGGGGCATCCCCCTCCTCC +
Preference number: 2 (lower is better)
Translates to: SGLRDPRVAGPATKRPPRWMKSS*GASPSS
Trigger: GGAGGAGGGGGATGCCCCCCAGGAGGACTTCATCCA...ACGGGGCGGCCGCTTAGTCGCAGGGCCCGCCACCCGAGGGTCGCGCAGCCCACT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000648750.1
3UTR-3UTR CCA 90 bp GGCGCGCAGGCTCCACAGGTCGCGGTAGCTGGTCTGGGCCTGCTCGGGGCCCGCCAGGGAAGTTGCCCTTaGGTTGGGGGAGGGGTGCTG +
Preference number: 2 (lower is better)
Translates to: GAQAPQVAVAGLGLLGARQGSCP*VGGGVL
Trigger: CAGCACCCCTCCCCCAACCCAAGGGCAACTTCCCTG...GCGGGCCCCGAGCAGGCCCAGACCAGCTACCGCGACCTGTGGAGCCTGCGCGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590083.5
3UTR CAA 90 bp GCGAGGCGCGGCGGAAAGAGTCTCTCGTCGAGGCCAGCCGCCAGCTaGTCCAGCACCGACCCGGATGGTAGGACGCACAGGCCCGAGCCG +
Preference number: 2 (lower is better)
Translates to: ARRGGKSLSSRPAAS*SSTDPDGRTHRPEP
Trigger: CGGCTCGGGCCTGTGCGTCCTACCATCCGGGTCGGTGCTGGACAAGCTGGCGGCTGGCCTCGACGAGAGACTCTTTCCGCCGCGCCTCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
3UTR-3UTR TCA 90 bp AGTGGGCTGCGCGACCCTCGGGTGGCGGGCCCTGCGACTAAGCGGCCGCCCCGTGACAGTGCACAGACGTaGGGGTCACCCGCCATACCA +
Preference number: 2 (lower is better)
Translates to: SGLRDPRVAGPATKRPPRDSAQT*GSPAIP
Trigger: TGGTATGGCGGGTGACCCTCACGTCTGTGCACTGTC...ACGGGGCGGCCGCTTAGTCGCAGGGCCCGCCACCCGAGGGTCGCGCAGCCCACT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590083.5
3UTR-3UTR GCA 90 bp GAGCCGCCTCCCGGCCCAGGGCGGCGAACTCGTCTGCGACCGTTAGCGCCCCGCCCAGCAGGAGGACAGTaGACAGACGTGAGGGTCACC +
Preference number: 2 (lower is better)
Translates to: EPPPGPGRRTRLRPLAPRPAGGQ*TDVRVT
Trigger: GGTGACCCTCACGTCTGTGCACTGTCCTCCTGCTGG...GCGGGGCGCTAACGGTCGCAGACGAGTTCGCCGCCCTGGGCCGGGAGGCGGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590083.5
3UTR-3UTR GCA 90 bp CAGCCGGCGTGTCGTCGAAGTGCGGGTCGTGGCGCAGGAACTCGTGGAACAGCGCGGCCGCCTCTAGCCTaGAAGCCAGGCCGCGCCGTC +
Preference number: 2 (lower is better)
Translates to: QPACRRSAGRGAGTRGTARPPLA*KPGRAV
Trigger: GACGGCGCGGCCTGGCTTGCAGGCTAGAGGCGGCCG...CGCTGTTCCACGAGTTCCTGCGCCACGACCCGCACTTCGACGACACGCCGGCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590083.5
3UTR-3UTR GCA 90 bp GGGCGCGGTGTCGCGCGGCAGCCGGCGTGTCGTCGAAGTGCGGGTCGTGGCGCATGCGTCTTGCGGCTCTaGTCAAACAGCGCCGCCTCA +
Preference number: 2 (lower is better)
Translates to: GRGVARQPACRRSAGRGACVLRL*SNSAAS
Trigger: TGAGGCGGCGCTGTTTGAGCAGAGCCGCAAGACGCA...TGCGCCACGACCCGCACTTCGACGACACGCCGGCTGCCGCGCGACACCGCGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648750.1
3UTR-3UTR GCA 90 bp GCCTCCCGGCCCAGGGCGGCGAACTCGTCTGCGACCGTTAGCGCCCCGCGGCCCCCTTGTCCTGCGTCTTaGGGCTCTGCTCAAACAGCG +
Preference number: 2 (lower is better)
Translates to: ASRPRAANSSATVSAPRPPCPAS*GSAQTA
Trigger: CGCTGTTTGAGCAGAGCCGCAAGACGCAGGACAAGG...GGGCCGCGGGGCGCTAACGGTCGCAGACGAGTTCGCCGCCCTGGGCCGGGAGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648750.1
3UTR-3UTR CCA 90 bp GGCGCGCAGGCTCCACAGGTCGCGGTAGCTGGTCTGGGCCTGCTCGGGGCCCGCTCTCTGCGAAGTCAGTaGCGCCCGCGGCTGAGTTGT +
Preference number: 2 (lower is better)
Translates to: GAQAPQVAVAGLGLLGARSLRSQ*RPRLSC
Trigger: ACAACTCAGCCGCGGGCGCCACTGACTTCGCAGAGA...GCGGGCCCCGAGCAGGCCCAGACCAGCTACCGCGACCTGTGGAGCCTGCGCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
3UTR-3UTR CCA 90 bp GCTCAAGCGAGGCGCGCAGGCTCCACAGGTCGCGGTAGCTGGTCTGGGCCTGCTGCTGCCCGCTGCCGCTaGAAGTGGTGCCGCTTGGGG +
Preference number: 2 (lower is better)
Translates to: AQARRAGSTGRGSWSGPAAARCR*KWCRLG
Trigger: CCCCAAGCGGCACCACTTCCAGCGGCAGCGGGCAGC...AGCAGGCCCAGACCAGCTACCGCGACCTGTGGAGCCTGCGCGCCTCGCTTGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
3UTR-3UTR CCA 90 bp GGCTCCACAGGTCGCGGTAGCTGGTCTGGGCCTGCTCGGGGCCCGCGTCCCGCTTGGATGAAGTCCTCCTaGGGGGCATCCCCCTCCTCC +
Preference number: 2 (lower is better)
Translates to: GSTGRGSWSGPARGPRPAWMKSS*GASPSS
Trigger: GGAGGAGGGGGATGCCCCCCAGGAGGACTTCATCCA...AGCGGGACGCGGGCCCCGAGCAGGCCCAGACCAGCTACCGCGACCTGTGGAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
3UTR-3UTR CCA 90 bp GCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAATTTGGCAATAGGCGTCCGGCTCCAGTaGCGGCTGCTGCTGCTCAGG +
Preference number: 2 (lower is better)
Translates to: AAGTRRVPCGRGRPNLAIGVRLQ*RLLLLR
Trigger: CCTGAGCAGCAGCAGCCGCCACTGGAGCCGGACGCC...TATTGCCAAATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
3UTR-3UTR CCA 90 bp CCCGGGCCCTCCAGCCTTGGTGCTCCTGGTACCGGCATCCAACGAGGTGCCTTCTGGCCGGGTGGGGCGTaGTGGCTGAGCTGGCCTCGC +
Preference number: 2 (lower is better)
Translates to: PGPSSLGAPGTGIQRGAFWPGGA*WLSWPR
Trigger: GCGAGGCCAGCTCAGCCACCACGCCCCACCCGGCCA...GAAGGCACCTCGTTGGATGCCGGTACCAGGAGCACCAAGGCTGGAGGGCCCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648750.1
3UTR-3UTR TCA 90 bp TTGTTCGCGTCTCAACGTGGATGGGGCGGCAGCGGGGCGGGCGCCGTTGACATGACAGCGCCGCCTCATTaGAGGAGACCCGGCGGCCCG +
Preference number: 2 (lower is better)
Translates to: LFASQRGWGGSGAGAVDMTAPPH*RRPGGP
Trigger: CGGGCCGCCGGGTCTCCTTCAATGAGGCGGCGCTGT...CATGTCAACGGCGCCCGCCCCGCTGCCGCCCCATCCACGTTGAGACGCGAACAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648750.1
3UTR-3UTR GCA 90 bp TTGTTCGCGTCTCAACGTGGATGGGGCGGCAGCGGGGCGGGCGCCGTTGACATGTCCGAGGCGGCCGCATaGAGCTCAAGCGAGGCGCGC +
Preference number: 2 (lower is better)
Translates to: LFASQRGWGGSGAGAVDMSEAAA*SSSEAR
Trigger: GCGCGCCTCGCTTGAGCTGCATGCGGCCGCCTCGGA...CATGTCAACGGCGCCCGCCCCGCTGCCGCCCCATCCACGTTGAGACGCGAACAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
3UTR-3UTR CCA 90 bp AAGGCCACGGCGTCGCCCGCCCGGGCAATGTACTGGATGAAGTCCTCCTGGGGGGCTGCCCGCTGCCGCTaGAAGTGGTGCCGCTTGGGG +
Preference number: 2 (lower is better)
Translates to: KATASPARAMYWMKSSWGAARCR*KWCRLG
Trigger: CCCCAAGCGGCACCACTTCCAGCGGCAGCGGGCAGC...CCCCCAGGAGGACTTCATCCAGTACATTGCCCGGGCGGGCGACGCCGTGGCCTT
70% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
3UTR-3UTR CCA 90 bp GCTCAAGCGAGGCGCGCAGGCTCCACAGGTCGCGGTAGCTGGTCTGGGCCTGCTACAGGTCGCGGTAGCTaGTCTGGGCCTGCTCGGGGC +
Preference number: 2 (lower is better)
Translates to: AQARRAGSTGRGSWSGPATGRGS*SGPARG
Trigger: GCCCCGAGCAGGCCCAGACCAGCTACCGCGACCTGT...AGCAGGCCCAGACCAGCTACCGCGACCTGTGGAGCCTGCGCGCCTCGCTTGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000591127.1
ENST00000648750.1
3UTR-3UTR TCA 90 bp CAGCCGGCGTGTCGTCGAAGTGCGGGTCGTGGCGCAGGAACTCGTGGAACAGCGAGTGGCGCCCGCGGCTaGGTTGTAGGGGTCACCTGG +
Preference number: 2 (lower is better)
Translates to: QPACRRSAGRGAGTRGTASGARG*VVGVTW
Trigger: CCAGGTGACCCCTACAACTCAGCCGCGGGCGCCACT...CGCTGTTCCACGAGTTCCTGCGCCACGACCCGCACTTCGACGACACGCCGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648750.1
3UTR-3UTR GCA 90 bp TGCGGGAAGGCCACGGCGTCGCCCGCCCGGGCAATGTACTGGATGAAGTCCTCCTCACTGGCTGCCCGCTaGCGCTGGAAGTGGTGCCGC +
Preference number: 2 (lower is better)
Translates to: CGKATASPARAMYWMKSSSLAAR*RWKWCR
Trigger: GCGGCACCACTTCCAGCGGCAGCGGGCAGCCAGTGA...GGAGGACTTCATCCAGTACATTGCCCGGGCGGGCGACGCCGTGGCCTTCCCGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
3UTR-3UTR GCA 90 bp GCTCAAGCGAGGCGCGCAGGCTCCACAGGTCGCGGTAGCTGGTCTGGGCCTGCTCCTCCTCCTGCTCCGTaGTCTCACTGGCTGCCCGCT +
Preference number: 2 (lower is better)
Translates to: AQARRAGSTGRGSWSGPAPPPAP*SHWLPA
Trigger: AGCGGGCAGCCAGTGAGAGCACGGAGCAGGAGGAGG...AGCAGGCCCAGACCAGCTACCGCGACCTGTGGAGCCTGCGCGCCTCGCTTGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
3UTR-3UTR GCA 90 bp GCCCAGCACCCGGCAAGCACCGGAAAGAGCAGTGCACACTTCGGCGGCGCGAGGCCGTCTTCTCGTCGATaGTGTAGTCGCGGCGCGGGC +
Preference number: 2 (lower is better)
Translates to: AQHPASTGKSSAHFGGARPSSRR*CSRGAG
Trigger: GCCCGCGCCGCGACTACAGCATCGACGAGAAGACGG...CCTCGCGCCGCCGAAGTGTGCACTGCTCTTTCCGGTGCTTGCCGGGTGCTGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
3UTR-3UTR CCA 90 bp GCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAATTTGCAGCCTTGGTGCTCCTaGTACCGGCATCCAACGAGG +
Preference number: 2 (lower is better)
Translates to: ADAAGTRRVPCGRGRPNLQPWCS*YRHPTR
Trigger: CCTCGTTGGATGCCGGTACCAGGAGCACCAAGGCTG...CAAATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648750.1
3UTR-3UTR CCA 90 bp GCTCAAGCGAGGCGCGCAGGCTCCACAGGTCGCGGTAGCTGGTCTGGGCCTGCTCTCTCGTGTCCAGACTaGCTGCCCGCTGGCTGGGCT +
Preference number: 2 (lower is better)
Translates to: AQARRAGSTGRGSWSGPALSCPD*LPAGWA
Trigger: AGCCCAGCCAGCGGGCAGCCAGTCTGGACACGAGAG...AGCAGGCCCAGACCAGCTACCGCGACCTGTGGAGCCTGCGCGCCTCGCTTGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
3UTR-3UTR CCA 90 bp CAGCCGGCGTGTCGTCGAAGTGCGGGTCGTGGCGCAGGAACTCGTGGAACAGCGACAGGTCGCGGTAGCTaGTCTGGGCCTGCTCGGGGC +
Preference number: 2 (lower is better)
Translates to: QPACRRSAGRGAGTRGTATGRGS*SGPARG
Trigger: GCCCCGAGCAGGCCCAGACCAGCTACCGCGACCTGT...CGCTGTTCCACGAGTTCCTGCGCCACGACCCGCACTTCGACGACACGCCGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
3UTR-3UTR CCA 90 bp CGGAAAGAGTCTCTCGTCGAGGCCAGCCGCCAGCTTGTCCAGCACCGACCCGGAGACGCGGGTGGGACTTaGGACTCGGGCGGGCCTTGG +
Preference number: 2 (lower is better)
Translates to: RKESLVEASRQLVQHRPGDAGGT*DSGGPW
Trigger: CCAAGGCCCGCCCGAGTCCCAAGTCCCACCCGCGTC...TCCGGGTCGGTGCTGGACAAGCTGGCGGCTGGCCTCGACGAGAGACTCTTTCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590083.5
3UTR-3UTR CCA 90 bp GCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAATTTGGCAATACTGGATCAGGGAGGGTaGACGCGGGTGGGACTTGGG +
Preference number: 2 (lower is better)
Translates to: AAGTRRVPCGRGRPNLAILDQGG*TRVGLG
Trigger: CCCAAGTCCCACCCGCGTCCACCCTCCCTGATCCAG...TATTGCCAAATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590083.5
3UTR-3UTR CCA 90 bp CGGAGAAGCTGCCAGAGAGATGGGCCCAGGACGCGGGACTTAGGCCGGGCTGTGCGGCCATCCCGCCTCTaGATCAGGGAGGGTGGACGC +
Preference number: 2 (lower is better)
Translates to: RRSCQRDGPRTRDLGRAVRPSRL*IREGGR
Trigger: GCGTCCACCCTCCCTGATCCAGAGGCGGGATGGCCG...CACAGCCCGGCCTAAGTCCCGCGTCCTGGGCCCATCTCTCTGGCAGCTTCTCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590083.5
3UTR-3UTR CCA 90 bp GCGCGGCGGAAAGAGTCTCTCGTCGAGGCCAGCCGCCAGCTTGTCCAGCACCGATTGCCGCTGCTGCTGTaGTCCGAGGCGGCCGCATGC +
Preference number: 2 (lower is better)
Translates to: ARRKESLVEASRQLVQHRLPLLL*SEAAAC
Trigger: GCATGCGGCCGCCTCGGACCACAGCAGCAGCGGCAA...TCGGTGCTGGACAAGCTGGCGGCTGGCCTCGACGAGAGACTCTTTCCGCCGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
3UTR-3UTR CCA 90 bp TTGTTCGCGTCTCAACGTGGATGGGGCGGCAGCGGGGCGGGCGCCGTTGACATGGGCGGCCCGTGGAGCTaGTGGACAGGAAGCGTTCGG +
Preference number: 2 (lower is better)
Translates to: LFASQRGWGGSGAGAVDMGGPWS*WTGSVR
Trigger: CCGAACGCTTCCTGTCCACCAGCTCCACGGGCCGCC...CATGTCAACGGCGCCCGCCCCGCTGCCGCCCCATCCACGTTGAGACGCGAACAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648750.1
3UTR-3UTR GCA 90 bp GCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAATTTGGCAATAGGGCTTCAGGGAAGTTaGCCTTGGGTTGGGGGAGGG +
Preference number: 2 (lower is better)
Translates to: AAGTRRVPCGRGRPNLAIGLQGS*PWVGGG
Trigger: CCCTCCCCCAACCCAAGGGCAACTTCCCTGAAGCCC...TATTGCCAAATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590083.5
3UTR-3UTR GCA 90 bp CGCGGTAGCTGGTCTGGGCCTGCTCGGGGCCCGCGTCCCGCTCGGCGTCCGGCTCAGGAAAAGTCAACATaGTTCTCTCCGGGAGTCACG +
Preference number: 2 (lower is better)
Translates to: RGSWSGPARGPRPARRPAQEKST*FSPGVT
Trigger: CGTGACTCCCGGAGAGAAGCATGTTGACTTTTCCTG...AGCCGGACGCCGAGCGGGACGCGGGCCCCGAGCAGGCCCAGACCAGCTACCGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590083.5
3UTR-3UTR GCA 90 bp GGAAAGAGTCTCTCGTCGAGGCCAGCCGCCAGCTTGTCCAGCACCGACCCGGATGCCTCCATGCTGGACTaGAGACGGCGGGGCCCCCTC +
Preference number: 2 (lower is better)
Translates to: GKSLSSRPAASLSSTDPDASMLD*RRRGPL
Trigger: GAGGGGGCCCCGCCGTCTGCAGTCCAGCATGGAGGC...ATCCGGGTCGGTGCTGGACAAGCTGGCGGCTGGCCTCGACGAGAGACTCTTTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590083.5
3UTR-3UTR CCA 90 bp GGCTCCTCCTCGATGACGGGGATGGCGGGGTCGTCGCCGGCGCCGCCCAGGGTGGACTCGGGCGGGCCTTaGAAGGTGAGAGCTTTAAAA +
Preference number: 2 (lower is better)
Translates to: GSSSMTGMAGSSPAPPRVDSGGP*KVRALK
Trigger: TTTTAAAGCTCTCACCTTCCAAGGCCCGCCCGAGTC...CACCCTGGGCGGCGCCGGCGACGACCCCGCCATCCCCGTCATCGAGGAGGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590083.5
3UTR-3UTR CCA 90 bp CCCGGGCCCTCCAGCCTTGGTGCTCCTGGTACCGGCATCCAACGAGGTGCCTTCTCGGTCTCCGCATCCTaGCACTCGGGGTCCTCTCCC +
Preference number: 2 (lower is better)
Translates to: PGPSSLGAPGTGIQRGAFSVSAS*HSGSSP
Trigger: GGGAGAGGACCCCGAGTGCCAGGATGCGGAGACCGA...GAAGGCACCTCGTTGGATGCCGGTACCAGGAGCACCAAGGCTGGAGGGCCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648750.1
3UTR-3UTR GCA 90 bp GCTCAAGCGAGGCGCGCAGGCTCCACAGGTCGCGGTAGCTGGTCTGGGCCTGCTCCCAGAGTCGCTAGATaGCGAGGGGCTGATCTCTGC +
Preference number: 2 (lower is better)
Translates to: AQARRAGSTGRGSWSGPAPRVAR*RGADLC
Trigger: GCAGAGATCAGCCCCTCGGCATCTAGCGACTCTGGG...AGCAGGCCCAGACCAGCTACCGCGACCTGTGGAGCCTGCGCGCCTCGCTTGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
3UTR-3UTR GCA 90 bp TGCGGGAAGGCCACGGCGTCGCCCGCCCGGGCAATGTACTGGATGAAGTCCTCCAGGCGGGTGAGGAACTaGAGAACGGTACCTGCCCCG +
Preference number: 2 (lower is better)
Translates to: CGKATASPARAMYWMKSSRRVRN*RTVPAP
Trigger: CGGGGCAGGTACCGTTCTGCAGTTCCTCACCCGCCT...GGAGGACTTCATCCAGTACATTGCCCGGGCGGGCGACGCCGTGGCCTTCCCGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
3UTR-3UTR GCA 90 bp GGGTCGTGGCGCAGGAACTCGTGGAACAGCGCGTCCGTCTTCTCGTCGATGCTGCCGAGTCGCGGTCGTTaGCGCTGCTGCTGTGGTCCG +
Preference number: 2 (lower is better)
Translates to: GSWRRNSWNSASVFSSMLPSRGR*RCCCGP
Trigger: CGGACCACAGCAGCAGCGGCAACGACCGCGACTCGG...CAGCATCGACGAGAAGACGGACGCGCTGTTCCACGAGTTCCTGCGCCACGACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
3UTR-3UTR GCA 90 bp GCGACTAAGCGGCCGCCCCGTCCGGGACTGAGGGCGAGTGATCGTTGTCCTCAGCACCGGAAAGAGCAGTaGACACTTCGGCGGCGCGAG +
Preference number: 2 (lower is better)
Translates to: ATKRPPRPGLRASDRCPQHRKEQ*TLRRRE
Trigger: CTCGCGCCGCCGAAGTGTGCACTGCTCTTTCCGGTG...CTGAGGACAACGATCACTCGCCCTCAGTCCCGGACGGGGCGGCCGCTTAGTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
3UTR-3UTR CCA 90 bp CTTGGACCTGGCCGTCTGGGTTTTGTTCGCGTCTCAACGTGGATGGGGCGGCAGCCATCCAGGCTGGCATaGCGGCGCAGGCGGGTGAGG +
Preference number: 2 (lower is better)
Translates to: LGPGRLGFVRVSTWMGRQPSRLA*RRRRVR
Trigger: CCTCACCCGCCTGCGCCGCCATGCCAGCCTGGATGG...CTGCCGCCCCATCCACGTTGAGACGCGAACAAAACCCAGACGGCCAGGTCCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648750.1
3UTR-3UTR CCA 90 bp GGAAAGAGTCTCTCGTCGAGGCCAGCCGCCAGCTTGTCCAGCACCGACCCGGATTTCCCAGCCTCCCAGTaGACGTGGGAGCCGCAGGGG +
Preference number: 2 (lower is better)
Translates to: GKSLSSRPAASLSSTDPDFPASQ*TWEPQG
Trigger: CCCCTGCGGCTCCCACGTCCACTGGGAGGCTGGGAA...ATCCGGGTCGGTGCTGGACAAGCTGGCGGCTGGCCTCGACGAGAGACTCTTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590083.5
3UTR-3UTR CCA 90 bp GCCATCGCGGGATGGTGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGCCTGAGTCACACTCGTaGATGGTGACAATCTTGAGG +
Preference number: 2 (lower is better)
Translates to: AIAGWCRRGGDSEGAVRAPESHS*MVTILR
Trigger: CCTCAAGATTGTCACCATCCACGAGTGTGACTCAGG...CGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCACCATCCCGCGATGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648750.1
3UTR CAA 90 bp CCCTTGTCCTGCGTCTTGCGGCTCTGCTCAAACAGCGCCGCCTCATaGAAGGAGACCCGGCGGCCCGTGGAGCTGGTGGACAGGAAGCGT +
Preference number: 2 (lower is better)
Translates to: PLSCVLRLCSNSAAS*KETRRPVELVDRKR
Trigger: ACGCTTCCTGTCCACCAGCTCCACGGGCCGCCGGGTCTCCTTCAATGAGGCGGCGCTGTTTGAGCAGAGCCGCAAGACGCAGGACAAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648750.1
3UTR-3UTR GCA 90 bp GCCCGCGCCTCACGACGCCCAGCACCCGGCAAGCACCGGAAAGAGCAGTGCACACTTCTGAGAGGAGTCTaGCCAGCCTTGGGAGCATGG +
Preference number: 2 (lower is better)
Translates to: ARASRRPAPGKHRKEQCTLLRGV*PALGAW
Trigger: CCATGCTCCCAAGGCTGGGCAGACTCCTCTCAGAAG...TGTGCACTGCTCTTTCCGGTGCTTGCCGGGTGCTGGGCGTCGTGAGGCGCGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590083.5
3UTR-3UTR GCA 90 bp GCTTGGACCTGGCCGTCTGGGTTTTGTTCGCGTCTCAACGTGGATGGGGCGGCAGGGTTGGGGGAGGGGTaGTGCTGGCCGGAGTGGTCA +
Preference number: 2 (lower is better)
Translates to: AWTWPSGFCSRLNVDGAAGLGEG*CWPEWS
Trigger: TGACCACTCCGGCCAGCAGCACCCCTCCCCCAACCC...TGCCGCCCCATCCACGTTGAGACGCGAACAAAACCCAGACGGCCAGGTCCAAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000590083.5
3UTR-3UTR CCA 90 bp CTGGCATGGCGGCGCAGGCGGGTGAGGAACTGCAGAACGGTACCTGCCCCGGATCAGCCTTGGTGCTCCTaGTACCGGCATCCAACGAGG +
Preference number: 2 (lower is better)
Translates to: LAWRRRRVRNCRTVPAPDQPWCS*YRHPTR
Trigger: CCTCGTTGGATGCCGGTACCAGGAGCACCAAGGCTG...ATCCGGGGCAGGTACCGTTCTGCAGTTCCTCACCCGCCTGCGCCGCCATGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
3UTR-3UTR CCA 90 bp CCCGGGCCCTCCAGCCTTGGTGCTCCTGGTACCGGCATCCAACGAGGTGCCTTCGGAAGTGGTGCCGCTTaGGGGAACCTCTCGTGTCCA +
Preference number: 2 (lower is better)
Translates to: PGPSSLGAPGTGIQRGAFGSGAA*GNLSCP
Trigger: TGGACACGAGAGGTTCCCCCAAGCGGCACCACTTCC...GAAGGCACCTCGTTGGATGCCGGTACCAGGAGCACCAAGGCTGGAGGGCCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
3UTR-3UTR CCA 90 bp GCGCGTCCGTCTTCTCGTCGATGCTGTAGTCGCGGCGCGGGCGGCGGGGCCAGGATTGACCCTGAGCTGTaGCGCCTGCTTATTAAGCAG +
Preference number: 2 (lower is better)
Translates to: ARPSSRRCCSRGAGGGARIDPEL*RLLIKQ
Trigger: CTGCTTAATAAGCAGGCGCCACAGCTCAGGGTCAAT...CCTGGCCCCGCCGCCCGCGCCGCGACTACAGCATCGACGAGAAGACGGACGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590083.5
3UTR CAA 90 bp GCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAATTaGGCAATAAATAAAGCTTGGGAAGCTTGGACCTGGCCGTCTGGG +
Preference number: 2 (lower is better)
Translates to: AAGTRRVPCGRGRPN*AINKAWEAWTWPSG
Trigger: CCCAGACGGCCAGGTCCAAGCTTCCCAAGCTTTATTTATTGCCAAATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
3UTR-3UTR GCA 90 bp TGCTTCTCTCCGGGAGTCACGTTTTCCCAGCCTCCCAGTGGACGTGGGAGCCGCGTCCAGCTCAGCCCCTaGTCCAGGCTAGGGCTCTCT +
Preference number: 2 (lower is better)
Translates to: CFSPGVTFSQPPSGRGSRVQLSP*SRLGLS
Trigger: AGAGAGCCCTAGCCTGGAGCAGGGGCTGAGCTGGAC...GCGGCTCCCACGTCCACTGGGAGGCTGGGAAAACGTGACTCCCGGAGAGAAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590083.5
3UTR CAA 90 bp GCTGAGCTGGCCTCGCCTGAGTCACACTCGTGGATGGTGACAATCTaGAGGGGCGGCAGGTGCAGGTGCGTGAGCCGGGCATTCTTCAGG +
Preference number: 2 (lower is better)
Translates to: AELASPESHSWMVTI*RGGRCRCVSRAFFR
Trigger: CCTGAAGAATGCCCGGCTCACGCACCTGCACCTGCCGCCCCTCAAGATTGTCACCATCCACGAGTGTGACTCAGGCGAGGCCAGCTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648750.1
3UTR-3UTR GCA 90 bp AAAACACGAGAAACGCCATCGCGGGATGGTGCAGACGCGGCGGGGACTCGGAGGCCCAGAGTCGCTAGATaGCGAGGGGCTGATCTCTGC +
Preference number: 2 (lower is better)
Translates to: KTRETPSRDGADAAGTRRPRVAR*RGADLC
Trigger: GCAGAGATCAGCCCCTCGGCATCTAGCGACTCTGGG...CCTCCGAGTCCCCGCCGCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGTTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648750.1
3UTR-3UTR CCA 90 bp CTTGGACCTGGCCGTCTGGGTTTTGTTCGCGTCTCAACGTGGATGGGGCGGCAGTGCTGCTGGCCGGAGTaGTCACAGCAGCTTCTGAGA +
Preference number: 2 (lower is better)
Translates to: LGPGRLGFVRVSTWMGRQCCWPE*SQQLLR
Trigger: TCTCAGAAGCTGCTGTGACCACTCCGGCCAGCAGCA...CTGCCGCCCCATCCACGTTGAGACGCGAACAAAACCCAGACGGCCAGGTCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590083.5
3UTR-3UTR GCA 90 bp TATCATCCAGAAAAGAAAAACACGAGAAACGCCATCGCGGGATGGTGCAGACGCAGTGGCGGCTGCTGCTaGTCAGGCCCCGCGCTGCCC +
Preference number: 2 (lower is better)
Translates to: YHPEKKNTRNAIAGWCRRSGGCC*SGPALP
Trigger: GGGCAGCGCGGGGCCTGAGCAGCAGCAGCCGCCACT...GCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGTTTTTCTTTTCTGGATGATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
3UTR-3UTR CCA 90 bp GCAATAAATAAAGCTTGGGAAGCTTGGACCTGGCCGTCTGGGTTTTGTTCGCGTGAGGGTGGACGCGGGTaGGACTTGGGACTCGGGCGG +
Preference number: 2 (lower is better)
Translates to: AINKAWEAWTWPSGFCSREGGRG*DLGLGR
Trigger: CCGCCCGAGTCCCAAGTCCCACCCGCGTCCACCCTC...ACGCGAACAAAACCCAGACGGCCAGGTCCAAGCTTCCCAAGCTTTATTTATTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590083.5
3UTR-3UTR TCA 90 bp TCATCCAGAAAAGAAAAACACGAGAAACGCCATCGCGGGATGGTGCAGACGCGGGGGACTGAGGGCGAGTaGTCGTTGTCCTCAGGAGCC +
Preference number: 2 (lower is better)
Translates to: SSRKEKHEKRHRGMVQTRGTEGE*SLSSGA
Trigger: GGCTCCTGAGGACAACGATCACTCGCCCTCAGTCCC...CCGCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGTTTTTCTTTTCTGGATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
3UTR-3UTR CCA 90 bp TATCATCCAGAAAAGAAAAACACGAGAAACGCCATCGCGGGATGGTGCAGACGCTGGCCAGAGTGGCCTTaGGAGAGGTGGCCGGGTGGG +
Preference number: 2 (lower is better)
Translates to: YHPEKKNTRNAIAGWCRRWPEWP*ERWPGG
Trigger: CCCACCCGGCCACCTCTCCCAAGGCCACTCTGGCCA...GCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGTTTTTCTTTTCTGGATGATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648750.1
3UTR-3UTR GCA 90 bp TCATCCAGAAAAGAAAAACACGAGAAACGCCATCGCGGGATGGTGCAGACGCGGCAGGCTAGGGCTCTCTaGCCACCCATGCTGGATAAC +
Preference number: 2 (lower is better)
Translates to: SSRKEKHEKRHRGMVQTRQARAL*PPMLDN
Trigger: GTTATCCAGCATGGGTGGGCAGAGAGCCCTAGCCTG...CCGCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGTTTTTCTTTTCTGGATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590083.5
3UTR-3UTR CCA 90 bp TATCATCCAGAAAAGAAAAACACGAGAAACGCCATCGCGGGATGGTGCAGACGCCGGGCATTCTTCAGGTaGTGGAAGTCCCCCTCCGTC +
Preference number: 2 (lower is better)
Translates to: YHPEKKNTRNAIAGWCRRRAFFR*WKSPSV
Trigger: GACGGAGGGGGACTTCCACCACCTGAAGAATGCCCG...GCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGTTTTTCTTTTCTGGATGATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000648750.1
3UTR-3UTR GCA 90 bp GCAATAAATAAAGCTTGGGAAGCTTGGACCTGGCCGTCTGGGTTTTGTTCGCGTGCAGGGGATGCGTCTTaGATTGACCCTGAGCTGTGG +
Preference number: 2 (lower is better)
Translates to: AINKAWEAWTWPSGFCSRAGDAS*IDPELW
Trigger: CCACAGCTCAGGGTCAATGCAAGACGCATCCCCTGC...ACGCGAACAAAACCCAGACGGCCAGGTCCAAGCTTCCCAAGCTTTATTTATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590083.5
3UTR-3UTR CCA 90 bp TCAATATTTATATCATCCAGAAAAGAAAAACACGAGAAACGCCATCGCGGGATGACAGGTCGCGGTAGCTaGTCTGGGCCTGCTCGGGGC +
Preference number: 2 (lower is better)
Translates to: SIFISSRKEKHEKRHRGMTGRGS*SGPARG
Trigger: GCCCCGAGCAGGCCCAGACCAGCTACCGCGACCTGT...CATCCCGCGATGGCGTTTCTCGTGTTTTTCTTTTCTGGATGATATAAATATTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
3UTR GCA 72 bp CTGTGCTGCCGGCCACGCTGCCACTGTTTGCGGGCGTaGGGGTGCGCGCGGGCGCGGTGTCGCGCGGCAGCC +
Preference number: 3 (lower is better)
Translates to: LCCRPRCHCLRA*GCARARCRAAA
Trigger: GGCTGCCGCGCGACACCGCGCCCGCGCGCACCCGCACGCCCGCAAACAGTGGCAGCGTGGCCGGCAGCACAG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
3UTR GCA 72 bp GCCCGGCACGCGGCGGCTCCATCGGGCCCAGTGGGCTaGGCGACCCTCGGGTGGCGGGCCCTGCGACTAAGC +
Preference number: 3 (lower is better)
Translates to: ARHAAAPSGPVG*ATLGWRALRLS
Trigger: GCTTAGTCGCAGGGCCCGCCACCCGAGGGTCGCGCAGCCCACTGGGCCCGATGGAGCCGCCGCGTGCCGGGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
3UTR CCA 72 bp GCTCCATCGGGCCCAGTGGGCTGCGCGACCCTCGGGTaGCGGGCCCTGCGACTAAGCGGCCGCCCCGTCCGG +
Preference number: 3 (lower is better)
Translates to: APSGPVGCATLG*RALRLSGRPVR
Trigger: CCGGACGGGGCGGCCGCTTAGTCGCAGGGCCCGCCACCCGAGGGTCGCGCAGCCCACTGGGCCCGATGGAGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
3UTR GCA 72 bp CCGGGCGGGCGCGGCAGGTGGCTCGGTGTCGTCGCCTaGGCCGCGGCCCTCGATGCTGGCGTAGCCACTGTC +
Preference number: 3 (lower is better)
Translates to: PGGRGRWLGVVA*AAALDAGVATV
Trigger: GACAGTGGCTACGCCAGCATCGAGGGCCGCGGCGCAGGCGACGACACCGAGCCACCTGCCGCGCCCGCCCGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
3UTR-3UTR CAA 90 bp GGATGGTGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAACAGCGCCGCCTCATaGAAGGAGACCCGGCGGCCC +
Preference number: 3 (lower is better)
Translates to: GWCRRGGDSEGAVRARPPNSAAS*KETRRP
Trigger: GGGCCGCCGGGTCTCCTTCAATGAGGCGGCGCTGTT...GGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCACCATCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648750.1
3UTR GCA 72 bp GCGGCGCAGGCGGGTGAGGAACTGCAGAACGGTACCTaGCCCGGATCCCGGGCCCGCCTCCCCAGGCCCTGC +
Preference number: 3 (lower is better)
Translates to: AAQAGEELQNGT*PGSRARLPRPC
Trigger: GCAGGGCCTGGGGAGGCGGGCCCGGGATCCGGGGCAGGTACCGTTCTGCAGTTCCTCACCCGCCTGCGCCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
3UTR CCA 72 bp CAAGCGAGGCGCGCAGGCTCCACAGGTCGCGGTAGCTaGTCTGGGCCTGCTCGGGGCCCGCGTCCCGCTCGG +
Preference number: 3 (lower is better)
Translates to: QARRAGSTGRGS*SGPARGPRPAR
Trigger: CCGAGCGGGACGCGGGCCCCGAGCAGGCCCAGACCAGCTACCGCGACCTGTGGAGCCTGCGCGCCTCGCTTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000591127.1
ENST00000648750.1
3UTR-3UTR CAA 90 bp CGGCGCGGTTATTGCTCGGAGGCGGCGCGGGCTGCCGCCAGCACACGCCGCAGTTCGGCAGTCACGGTGTaGAGCCGCCTCCCGGCCCAG +
Preference number: 3 (lower is better)
Translates to: RRGYCSEAARAAASTRRSSAVTV*SRLPAQ
Trigger: CTGGGCCGGGAGGCGGCTCAACACCGTGACTGCCGA...ACTGCGGCGTGTGCTGGCGGCAGCCCGCGCCGCCTCCGAGCAATAACCGCGCCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
3UTR GCA 72 bp TCCAGGCTGGCATGGCGGCGCAGGCGGGTGAGGAACTaGAGAACGGTACCTGCCCCGGATCCCGGGCCCGCC +
Preference number: 3 (lower is better)
Translates to: SRLAWRRRRVRN*RTVPAPDPGPA
Trigger: GGCGGGCCCGGGATCCGGGGCAGGTACCGTTCTGCAGTTCCTCACCCGCCTGCGCCGCCATGCCAGCCTGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
3UTR GCA 72 bp CGCCGCTGCGCACCGAGTCGCGGTCGTTGCCGCTGCTaGTGTGGTCCGAGGCGGCCGCATGCAGCTCAAGCG +
Preference number: 3 (lower is better)
Translates to: RRCAPSRGRCRC*CGPRRPHAAQA
Trigger: CGCTTGAGCTGCATGCGGCCGCCTCGGACCACAGCAGCAGCGGCAACGACCGCGACTCGGTGCGCAGCGGCG
74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
3UTR GCA 72 bp CCGAGCTGTCGCCGCTGCGCACCGAGTCGCGGTCGTTaGCGCTGCTGCTGTGGTCCGAGGCGGCCGCATGCA +
Preference number: 3 (lower is better)
Translates to: PSCRRCAPSRGR*RCCCGPRRPHA
Trigger: TGCATGCGGCCGCCTCGGACCACAGCAGCAGCGGCAACGACCGCGACTCGGTGCGCAGCGGCGACAGCTCGG
74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
3UTR GCA 72 bp GCGCGGTGTCGCGCGGCAGCCGGCGTGTCGTCGAAGTaGGGGTCGTGGCGCAGGAACTCGTGGAACAGCGCG +
Preference number: 3 (lower is better)
Translates to: ARCRAAAGVSSK*GSWRRNSWNSA
Trigger: CGCGCTGTTCCACGAGTTCCTGCGCCACGACCCGCACTTCGACGACACGCCGGCTGCCGCGCGACACCGCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
3UTR GCA 72 bp CGACGCCCAGCACCCGGCAAGCACCGGAAAGAGCAGTaGACACTTCGGCGGCGCGAGGGCGGCCGGGGCTCT +
Preference number: 3 (lower is better)
Translates to: RRPAPGKHRKEQ*TLRRREGGRGS
Trigger: AGAGCCCCGGCCGCCCTCGCGCCGCCGAAGTGTGCACTGCTCTTTCCGGTGCTTGCCGGGTGCTGGGCGTCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
3UTR CCA 72 bp ACCCGGCCGGCCATCCCGCCTCTGGATCAGGGAGGGTaGACGCGGGTGGGACTTGGGACTCGGGCGGGCCTT +
Preference number: 3 (lower is better)
Translates to: TRPAIPPLDQGG*TRVGLGTRAGL
Trigger: AAGGCCCGCCCGAGTCCCAAGTCCCACCCGCGTCCACCCTCCCTGATCCAGAGGCGGGATGGCCGGCCGGGT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590083.5
3UTR CCA 72 bp GCTCGGTGTCGTCGCCTGCGCCGCGGCCCTCGATGCTaGCGTAGCCACTGTCCATCTGCAGCAGCCGGCGCG +
Preference number: 3 (lower is better)
Translates to: ARCRRLRRGPRC*RSHCPSAAAGA
Trigger: CGCGCCGGCTGCTGCAGATGGACAGTGGCTACGCCAGCATCGAGGGCCGCGGCGCAGGCGACGACACCGAGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
3UTR TCA 72 bp GGAGGCGGCGCGGGCTGCCGCCAGCACACGCCGCAGTaGGGTAAACGGTCTCGGAGGTCGGCAGTCACGGTG +
Preference number: 3 (lower is better)
Translates to: GGGAGCRQHTPQ*GKRSRRSAVTV
Trigger: CACCGTGACTGCCGACCTCCGAGACCGTTTACCTCACTGCGGCGTGTGCTGGCGGCAGCCCGCGCCGCCTCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
3UTR GCA 72 bp GTGGCTCGGTGTCGTCGCCTGCGCCGCGGCCCTCGATaGTGGCGTAGCCACTGTCCATCTGCAGCAGCCGGC +
Preference number: 3 (lower is better)
Translates to: VARCRRLRRGPR*WRSHCPSAAAG
Trigger: GCCGGCTGCTGCAGATGGACAGTGGCTACGCCAGCATCGAGGGCCGCGGCGCAGGCGACGACACCGAGCCAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
3UTR CCA 72 bp CTGCGCACCGAGTCGCGGTCGTTGCCGCTGCTGCTGTaGTCCGAGGCGGCCGCATGCAGCTCAAGCGAGGCG +
Preference number: 3 (lower is better)
Translates to: LRTESRSLPLLL*SEAAACSSSEA
Trigger: CGCCTCGCTTGAGCTGCATGCGGCCGCCTCGGACCACAGCAGCAGCGGCAACGACCGCGACTCGGTGCGCAG
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
3UTR-3UTR CAA 90 bp GGCTCCACAGGTCGCGGTAGCTGGTCTGGGCCTGCTCGGGGCCCGCGTCCCGCTTGGAAGTGGTGCCGCTaGGGGGAACCTCTCGTGTCC +
Preference number: 3 (lower is better)
Translates to: GSTGRGSWSGPARGPRPAWKWCR*GEPLVS
Trigger: GGACACGAGAGGTTCCCCCAAGCGGCACCACTTCCA...AGCGGGACGCGGGCCCCGAGCAGGCCCAGACCAGCTACCGCGACCTGTGGAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
3UTR-3UTR CAA 90 bp GGCTCCACAGGTCGCGGTAGCTGGTCTGGGCCTGCTCGGGGCCCGCGTCCCGCTGGGATGCGTCTTGCATaGACCCTGAGCTGTGGCGCC +
Preference number: 3 (lower is better)
Translates to: GSTGRGSWSGPARGPRPAGMRLA*TLSCGA
Trigger: GGCGCCACAGCTCAGGGTCAATGCAAGACGCATCCC...AGCGGGACGCGGGCCCCGAGCAGGCCCAGACCAGCTACCGCGACCTGTGGAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590083.5
3UTR TCA 72 bp TGGCCCCATCCAGGCTGGCATGGCGGCGCAGGCGGGTaGGGAACTGCAGAACGGTACCTGCCCCGGATCCCG +
Preference number: 3 (lower is better)
Translates to: WPHPGWHGGAGG*GTAERYLPRIP
Trigger: CGGGATCCGGGGCAGGTACCGTTCTGCAGTTCCTCACCCGCCTGCGCCGCCATGCCAGCCTGGATGGGGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
3UTR TCA 72 bp CGGGCCCTGCGACTAAGCGGCCGCCCCGTCCGGGACTaGGGGCGAGTGATCGTTGTCCTCAGGAGCCCGAAG +
Preference number: 3 (lower is better)
Translates to: RALRLSGRPVRD*GRVIVVLRSPK
Trigger: CTTCGGGCTCCTGAGGACAACGATCACTCGCCCTCAGTCCCGGACGGGGCGGCCGCTTAGTCGCAGGGCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
3UTR GCA 72 bp GGCATCCCCCTCCTCCTGCTCCGTGCTCTCACTGGCTaGCCGCTGCCGCTGGAAGTGGTGCCGCTTGGGGGA +
Preference number: 3 (lower is better)
Translates to: GIPLLLLRALTG*PLPLEVVPLGG
Trigger: TCCCCCAAGCGGCACCACTTCCAGCGGCAGCGGGCAGCCAGTGAGAGCACGGAGCAGGAGGAGGGGGATGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
3UTR GCA 72 bp TGTCGCCGCTGCGCACCGAGTCGCGGTCGTTGCCGCTaGTGCTGTGGTCCGAGGCGGCCGCATGCAGCTCAA +
Preference number: 3 (lower is better)
Translates to: CRRCAPSRGRCR*CCGPRRPHAAQ
Trigger: TTGAGCTGCATGCGGCCGCCTCGGACCACAGCAGCAGCGGCAACGACCGCGACTCGGTGCGCAGCGGCGACA
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
3UTR CCA 72 bp CGCGCGGCAGCCGGCGTGTCGTCGAAGTGCGGGTCGTaGCGCAGGAACTCGTGGAACAGCGCGTCCGTCTTC +
Preference number: 3 (lower is better)
Translates to: RAAAGVSSKCGS*RRNSWNSASVF
Trigger: GAAGACGGACGCGCTGTTCCACGAGTTCCTGCGCCACGACCCGCACTTCGACGACACGCCGGCTGCCGCGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
3UTR-3UTR CAA 90 bp CCGCATGCAGCTCAAGCGAGGCGCGCAGGCTCCACAGGTCGCGGTAGCTGGTCTCCGGGCCCTCCAGCCTaGGTGCTCCTGGTACCGGCA +
Preference number: 3 (lower is better)
Translates to: PHAAQARRAGSTGRGSWSPGPPA*VLLVPA
Trigger: TGCCGGTACCAGGAGCACCAAGGCTGGAGGGCCCGG...AGACCAGCTACCGCGACCTGTGGAGCCTGCGCGCCTCGCTTGAGCTGCATGCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
3UTR-3UTR CAA 90 bp GCCATCGCGGGATGGTGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGCTGGCCGTCTGGGTTTaGTTCGCGTCTCAACGTGGA +
Preference number: 3 (lower is better)
Translates to: AIAGWCRRGGDSEGAVRALAVWV*FASQRG
Trigger: TCCACGTTGAGACGCGAACAAAACCCAGACGGCCAG...CGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCACCATCCCGCGATGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
3UTR TCA 72 bp GGGGCTGATCTCTGCGAAGTCAGTGGCGCCCGCGGCTaGGTTGTAGGGGTCACCTGGCAGGGCGGAGCTGGG +
Preference number: 3 (lower is better)
Translates to: GADLCEVSGARG*VVGVTWQGGAG
Trigger: CCCAGCTCCGCCCTGCCAGGTGACCCCTACAACTCAGCCGCGGGCGCCACTGACTTCGCAGAGATCAGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648750.1
3UTR GCA 72 bp CCCTCCTCCTGCTCCGTGCTCTCACTGGCTGCCCGCTaGCGCTGGAAGTGGTGCCGCTTGGGGGAACCTCTC +
Preference number: 3 (lower is better)
Translates to: PSSCSVLSLAAR*RWKWCRLGEPL
Trigger: GAGAGGTTCCCCCAAGCGGCACCACTTCCAGCGGCAGCGGGCAGCCAGTGAGAGCACGGAGCAGGAGGAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
3UTR GCA 72 bp TGGCCGGAGTGGTCACAGCAGCTTCTGAGAGGAGTCTaGCCAGCCTTGGGAGCATGGGCGGGGCGGGGGTGG +
Preference number: 3 (lower is better)
Translates to: WPEWSQQLLRGV*PALGAWAGRGW
Trigger: CCACCCCCGCCCCGCCCATGCTCCCAAGGCTGGGCAGACTCCTCTCAGAAGCTGCTGTGACCACTCCGGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590083.5
3UTR GCA 72 bp CATCCCACCGACGTGGGCCCTGGGCTTCAGGGAAGTTaGCCTTGGGTTGGGGGAGGGGTGCTGCTGGCCGGA +
Preference number: 3 (lower is better)
Translates to: HPTDVGPGLQGS*PWVGGGVLLAG
Trigger: TCCGGCCAGCAGCACCCCTCCCCCAACCCAAGGGCAACTTCCCTGAAGCCCAGGGCCCACGTCGGTGGGATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590083.5
3UTR CCA 72 bp GCCTCCCAGTGGACGTGGGAGCCGCAGGGGATGGACTaGACGCGGTTGAGTCCAGCTCAGCCCCTGCTCCAG +
Preference number: 3 (lower is better)
Translates to: ASQWTWEPQGMD*TRLSPAQPLLQ
Trigger: CTGGAGCAGGGGCTGAGCTGGACTCAACCGCGTCCAGTCCATCCCCTGCGGCTCCCACGTCCACTGGGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590083.5
3UTR CCA 72 bp CCATCCCGCCTCTGGATCAGGGAGGGTGGACGCGGGTaGGACTTGGGACTCGGGCGGGCCTTGGAAGGTGAG +
Preference number: 3 (lower is better)
Translates to: PSRLWIREGGRG*DLGLGRALEGE
Trigger: CTCACCTTCCAAGGCCCGCCCGAGTCCCAAGTCCCACCCGCGTCCACCCTCCCTGATCCAGAGGCGGGATGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590083.5
3UTR-3UTR CAA 90 bp TGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAATTTTGGATGGTGACAATCTaGAGGGGCGGCAGGTGCAGG +
Preference number: 3 (lower is better)
Translates to: CRRGGDSEGAVRARPPKFWMVTI*RGGRCR
Trigger: CCTGCACCTGCCGCCCCTCAAGATTGTCACCATCCA...AAATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648750.1
3UTR TCA 72 bp GAGGTAAACGGTCTCGGAGGTCGGCAGTCACGGTGTTaGGCCGCCTCCCGGCCCAGGGCGGCGAACTCGTCT +
Preference number: 3 (lower is better)
Translates to: EVNGLGGRQSRC*AASRPRAANSS
Trigger: AGACGAGTTCGCCGCCCTGGGCCGGGAGGCGGCTCAACACCGTGACTGCCGACCTCCGAGACCGTTTACCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
3UTR CCA 72 bp CTGCTGCAGCCCCGGGCCCTCCAGCCTTGGTGCTCCTaGTACCGGCATCCAACGAGGTGCCTTCCCCAGAGT +
Preference number: 3 (lower is better)
Translates to: LLQPRALQPWCS*YRHPTRCLPQS
Trigger: ACTCTGGGGAAGGCACCTCGTTGGATGCCGGTACCAGGAGCACCAAGGCTGGAGGGCCCGGGGCTGCAGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
3UTR CCA 72 bp TCCTGCTCCGTGCTCTCACTGGCTGCCCGCTGCCGCTaGAAGTGGTGCCGCTTGGGGGAACCTCTCGTGTCC +
Preference number: 3 (lower is better)
Translates to: SCSVLSLAARCR*KWCRLGEPLVS
Trigger: GGACACGAGAGGTTCCCCCAAGCGGCACCACTTCCAGCGGCAGCGGGCAGCCAGTGAGAGCACGGAGCAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
3UTR-3UTR CAA 90 bp AAGCTTGGACCTGGCCGTCTGGGTTTTGTTCGCGTCTCAACGTGGATGGGGCGGGGACGCGGGTGGGACTaGGGACTCGGGCGGGCCTTG +
Preference number: 3 (lower is better)
Translates to: KLGPGRLGFVRVSTWMGRGRGWD*GLGRAL
Trigger: CAAGGCCCGCCCGAGTCCCAAGTCCCACCCGCGTCC...CCGCCCCATCCACGTTGAGACGCGAACAAAACCCAGACGGCCAGGTCCAAGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590083.5
3UTR-3UTR CAA 90 bp GGCCCTCCAGCCTTGGTGCTCCTGGTACCGGCATCCAACGAGGTGCCTTCCCCAGTGTACCGGCGACCCTaGTCCTGCGTCTTGCGGCTC +
Preference number: 3 (lower is better)
Translates to: GPPALVLLVPASNEVPSPVYRRP*SCVLRL
Trigger: GAGCCGCAAGACGCAGGACAAGGGTCGCCGGTACAC...TGGGGAAGGCACCTCGTTGGATGCCGGTACCAGGAGCACCAAGGCTGGAGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648750.1
3UTR GCA 72 bp GTGCTCTCACTGGCTGCCCGCTGCCGCTGGAAGTGGTaGCGCTTGGGGGAACCTCTCGTGTCCAGACTGGCT +
Preference number: 3 (lower is better)
Translates to: VLSLAARCRWKW*RLGEPLVSRLA
Trigger: AGCCAGTCTGGACACGAGAGGTTCCCCCAAGCGGCACCACTTCCAGCGGCAGCGGGCAGCCAGTGAGAGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
3UTR CCA 72 bp TCCGTGCTCTCACTGGCTGCCCGCTGCCGCTGGAAGTaGTGCCGCTTGGGGGAACCTCTCGTGTCCAGACTG +
Preference number: 3 (lower is better)
Translates to: SVLSLAARCRWK*CRLGEPLVSRL
Trigger: CAGTCTGGACACGAGAGGTTCCCCCAAGCGGCACCACTTCCAGCGGCAGCGGGCAGCCAGTGAGAGCACGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
3UTR CCA 72 bp TCGCCCGCCCGGGCAATGTACTGGATGAAGTCCTCCTaGGGGGCATCCCCCTCCTCCTGCTCCGTGCTCTCA +
Preference number: 3 (lower is better)
Translates to: SPARAMYWMKSS*GASPSSCSVLS
Trigger: TGAGAGCACGGAGCAGGAGGAGGGGGATGCCCCCCAGGAGGACTTCATCCAGTACATTGCCCGGGCGGGCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
3UTR-3UTR CAA 90 bp GCCCAGCACCCGGCAAGCACCGGAAAGAGCAGTGCACACTTCGGCGGCGCGAGGGGACTCGGGCGGGCCTaGGAAGGTGAGAGCTTTAAA +
Preference number: 3 (lower is better)
Translates to: AQHPASTGKSSAHFGGARGLGRA*EGESFK
Trigger: TTTAAAGCTCTCACCTTCCAAGGCCCGCCCGAGTCC...CCTCGCGCCGCCGAAGTGTGCACTGCTCTTTCCGGTGCTTGCCGGGTGCTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590083.5
3UTR-3UTR CAA 90 bp CGCCATCGCGGGATGGTGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCCGAGGCCGCCCAAATTaGGCAATAAATAAAGCTTGG +
Preference number: 3 (lower is better)
Translates to: RHRGMVQTRRGLGGCRAGRGRPN*AINKAW
Trigger: CCAAGCTTTATTTATTGCCAAATTTGGGCGGCCTCG...GCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCACCATCCCGCGATGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
3UTR GCA 72 bp AGCTGTGGCGCCTGCTTATTAAGCAGGGTGCCTCCATaGTGGACTGCAGACGGCGGGGCCCCCTCCCTTGGA +
Preference number: 3 (lower is better)
Translates to: SCGACLLSRVPP*WTADGGAPSLG
Trigger: TCCAAGGGAGGGGGCCCCGCCGTCTGCAGTCCAGCATGGAGGCACCCTGCTTAATAAGCAGGCGCCACAGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590083.5
3UTR CCA 72 bp TGTGGCGCCTGCTTATTAAGCAGGGTGCCTCCATGCTaGACTGCAGACGGCGGGGCCCCCTCCCTTGGAAGC +
Preference number: 3 (lower is better)
Translates to: CGACLLSRVPPC*TADGGAPSLGS
Trigger: GCTTCCAAGGGAGGGGGCCCCGCCGTCTGCAGTCCAGCATGGAGGCACCCTGCTTAATAAGCAGGCGCCACA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590083.5
3UTR CCA 72 bp GCCTCTGGATCAGGGAGGGTGGACGCGGGTGGGACTTaGGACTCGGGCGGGCCTTGGAAGGTGAGAGCTTTA +
Preference number: 3 (lower is better)
Translates to: ASGSGRVDAGGT*DSGGPWKVRAL
Trigger: TAAAGCTCTCACCTTCCAAGGCCCGCCCGAGTCCCAAGTCCCACCCGCGTCCACCCTCCCTGATCCAGAGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590083.5
3UTR CCA 72 bp AGGTGCAGGTGCGTGAGCCGGGCATTCTTCAGGTGGTaGAAGTCCCCCTCCGTCAGTGTGTACCGGCGACCC +
Preference number: 3 (lower is better)
Translates to: RCRCVSRAFFRW*KSPSVSVYRRP
Trigger: GGGTCGCCGGTACACACTGACGGAGGGGGACTTCCACCACCTGAAGAATGCCCGGCTCACGCACCTGCACCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648750.1
3UTR CCA 72 bp GGCAGGTGCAGGTGCGTGAGCCGGGCATTCTTCAGGTaGTGGAAGTCCCCCTCCGTCAGTGTGTACCGGCGA +
Preference number: 3 (lower is better)
Translates to: GRCRCVSRAFFR*WKSPSVSVYRR
Trigger: TCGCCGGTACACACTGACGGAGGGGGACTTCCACCACCTGAAGAATGCCCGGCTCACGCACCTGCACCTGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648750.1
3UTR-3UTR CAA 90 bp AAAACACGAGAAACGCCATCGCGGGATGGTGCAGACGCGGCGGGGACTCGGAGGATGGACTGGACGCGGTaGAGTCCAGCTCAGCCCCTG +
Preference number: 3 (lower is better)
Translates to: KTRETPSRDGADAAGTRRMDWTR*SPAQPL
Trigger: CAGGGGCTGAGCTGGACTCAACCGCGTCCAGTCCAT...CCTCCGAGTCCCCGCCGCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGTTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590083.5
3UTR GCA 72 bp GGCATCCAACGAGGTGCCTTCCCCAGAGTCGCTAGATaGCGAGGGGCTGATCTCTGCGAAGTCAGTGGCGCC +
Preference number: 3 (lower is better)
Translates to: GIQRGAFPRVAR*RGADLCEVSGA
Trigger: GGCGCCACTGACTTCGCAGAGATCAGCCCCTCGGCATCTAGCGACTCTGGGGAAGGCACCTCGTTGGATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
3UTR GCA 72 bp GTGTACCGGCGACCCTTGTCCTGCGTCTTGCGGCTCTaGTCAAACAGCGCCGCCTCATTGAAGGAGACCCGG +
Preference number: 3 (lower is better)
Translates to: VYRRPLSCVLRL*SNSAASLKETR
Trigger: CCGGGTCTCCTTCAATGAGGCGGCGCTGTTTGAGCAGAGCCGCAAGACGCAGGACAAGGGTCGCCGGTACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648750.1
3UTR-3UTR CAA 90 bp CATCCAGAAAAGAAAAACACGAGAAACGCCATCGCGGGATGGTGCAGACGCGGCGGAGTCTGCCCAGCCTaGGGAGCATGGGCGGGGCGG +
Preference number: 3 (lower is better)
Translates to: HPEKKNTRNAIAGWCRRGGVCPA*GAWAGR
Trigger: CCGCCCCGCCCATGCTCCCAAGGCTGGGCAGACTCC...GCCGCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGTTTTTCTTTTCTGGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590083.5
3UTR-3UTR CAA 90 bp CTTGGACCTGGCCGTCTGGGTTTTGTTCGCGTCTCAACGTGGATGGGGCGGCAGTGGGCTTCAGGGAAGTaGCCCTTGGGTTGGGGGAGG +
Preference number: 3 (lower is better)
Translates to: LGPGRLGFVRVSTWMGRQWASGK*PLGWGR
Trigger: CCTCCCCCAACCCAAGGGCAACTTCCCTGAAGCCCA...CTGCCGCCCCATCCACGTTGAGACGCGAACAAAACCCAGACGGCCAGGTCCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590083.5
3UTR GCA 72 bp GATGGTGCAGACGCGGCGGGGACTCGGAGGGTGCCGTaGGGGCGAGGCCGCCCAAATTTGGCAATAAATAAA +
Preference number: 3 (lower is better)
Translates to: DGADAAGTRRVP*GRGRPNLAINK
Trigger: TTTATTTATTGCCAAATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCACCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
3UTR TCA 72 bp ATGCTGGATAACCAGCAGGAGGACAGTGCACAGACGTaGGGGTCACCCGCCATACCAGGGCTGCCCCAGGAA +
Preference number: 3 (lower is better)
Translates to: MLDNQQEDSAQT*GSPAIPGLPQE
Trigger: TTCCTGGGGCAGCCCTGGTATGGCGGGTGACCCTCACGTCTGTGCACTGTCCTCCTGCTGGTTATCCAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590083.5
3UTR-3UTR CAA 90 bp CATCCAGAAAAGAAAAACACGAGAAACGCCATCGCGGGATGGTGCAGACGCGGCTGGAAGTGGTGCCGCTaGGGGGAACCTCTCGTGTCC +
Preference number: 3 (lower is better)
Translates to: HPEKKNTRNAIAGWCRRGWKWCR*GEPLVS
Trigger: GGACACGAGAGGTTCCCCCAAGCGGCACCACTTCCA...GCCGCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGTTTTTCTTTTCTGGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000648750.1
3UTR GCA 72 bp GGGATGCGTCTTGCATTGACCCTGAGCTGTGGCGCCTaGTTATTAAGCAGGGTGCCTCCATGCTGGACTGCA +
Preference number: 3 (lower is better)
Translates to: GMRLALTLSCGA*LLSRVPPCWTA
Trigger: TGCAGTCCAGCATGGAGGCACCCTGCTTAATAAGCAGGCGCCACAGCTCAGGGTCAATGCAAGACGCATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590083.5
3UTR-3UTR CAA 90 bp GCAATAAATAAAGCTTGGGAAGCTTGGACCTGGCCGTCTGGGTTTTGTTCGCGTCCCTTGTCCTGCGTCTaGCGGCTCTGCTCAAACAGC +
Preference number: 3 (lower is better)
Translates to: AINKAWEAWTWPSGFCSRPLSCV*RLCSNS
Trigger: GCTGTTTGAGCAGAGCCGCAAGACGCAGGACAAGGG...ACGCGAACAAAACCCAGACGGCCAGGTCCAAGCTTCCCAAGCTTTATTTATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648750.1
3UTR CCA 72 bp CGCCCAAATTTGGCAATAAATAAAGCTTGGGAAGCTTaGACCTGGCCGTCTGGGTTTTGTTCGCGTCTCAAC +
Preference number: 3 (lower is better)
Translates to: RPNLAINKAWEA*TWPSGFCSRLN
Trigger: GTTGAGACGCGAACAAAACCCAGACGGCCAGGTCCAAGCTTCCCAAGCTTTATTTATTGCCAAATTTGGGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
3UTR CCA 72 bp AATTTGGCAATAAATAAAGCTTGGGAAGCTTGGACCTaGCCGTCTGGGTTTTGTTCGCGTCTCAACGTGGAT +
Preference number: 3 (lower is better)
Translates to: NLAINKAWEAWT*PSGFCSRLNVD
Trigger: ATCCACGTTGAGACGCGAACAAAACCCAGACGGCCAGGTCCAAGCTTCCCAAGCTTTATTTATTGCCAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR TCA 90 bp GGATGGTGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCCGGCAGTCACGGTGTTaGGCCGCCTCCCGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GWCRRGGDSEGAVRARPPRQSRC*AASRPR
Trigger: CCTGGGCCGGGAGGCGGCTCAACACCGTGACTGCCG...GGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCACCATCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp CGTCCCGCTCGGCGTCCGGCTCCAGTGGCGGCTGCTGCTGCTCAGGCCCCGCGCTGGCCGGGTGGGGCGTaGTGGCTGAGCTGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: RPARRPAPVAAAAAQAPRWPGGA*WLSWPR
Trigger: GCGAGGCCAGCTCAGCCACCACGCCCCACCCGGCCA...GCGCGGGGCCTGAGCAGCAGCAGCCGCCACTGGAGCCGGACGCCGAGCGGGACG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000591127.1
ENST00000648750.1
CDS-3UTR CCA 90 bp GCGGTAGCTGGTCTGGGCCTGCTCGGGGCCCGCGTCCCGCTCGGCGTCCGGCTCTGGCCGGGTGGGGCGTaGTGGCTGAGCTGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: AVAGLGLLGARVPLGVRLWPGGA*WLSWPR
Trigger: GCGAGGCCAGCTCAGCCACCACGCCCCACCCGGCCA...GAGCCGGACGCCGAGCGGGACGCGGGCCCCGAGCAGGCCCAGACCAGCTACCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000591127.1
ENST00000648750.1
CDS-3UTR CCA 90 bp CGAACTCGTCTGCGACCGTTAGCGCCCCGCGGCCCCCGCCCGGGCGAGCTCGCGTGGCCGGGTGGGGCGTaGTGGCTGAGCTGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: RTRLRPLAPRGPRPGELAWPGGA*WLSWPR
Trigger: GCGAGGCCAGCTCAGCCACCACGCCCCACCCGGCCA...CGCGAGCTCGCCCGGGCGGGGGCCGCGGGGCGCTAACGGTCGCAGACGAGTTCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR TCA 90 bp GCCTCCCGGCCCAGGGCGGCGAACTCGTCTGCGACCGTTAGCGCCCCGCGGCCCACAGCGCCGCCTCATTaGAGGAGACCCGGCGGCCCG +
Preference number: 4 (lower is better)
Translates to: ASRPRAANSSATVSAPRPTAPPH*RRPGGP
Trigger: CGGGCCGCCGGGTCTCCTTCAATGAGGCGGCGCTGT...GGGCCGCGGGGCGCTAACGGTCGCAGACGAGTTCGCCGCCCTGGGCCGGGAGGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp GGCGCGCAGGCTCCACAGGTCGCGGTAGCTGGTCTGGGCCTGCTCGGGGCCCGCAGTGGCGGCTGCTGCTaGTCAGGCCCCGCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: GAQAPQVAVAGLGLLGARSGGCC*SGPALP
Trigger: GGGCAGCGCGGGGCCTGAGCAGCAGCAGCCGCCACT...GCGGGCCCCGAGCAGGCCCAGACCAGCTACCGCGACCTGTGGAGCCTGCGCGCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000591127.1
ENST00000648750.1
CDS-3UTR GCA 90 bp AGTGGGCTGCGCGACCCTCGGGTGGCGGGCCCTGCGACTAAGCGGCCGCCCCGTGGCTCCAGTGGCGGCTaGTGCTGCTCAGGCCCCGCG +
Preference number: 4 (lower is better)
Translates to: SGLRDPRVAGPATKRPPRGSSGG*CCSGPA
Trigger: CGCGGGGCCTGAGCAGCAGCAGCCGCCACTGGAGCC...ACGGGGCGGCCGCTTAGTCGCAGGGCCCGCCACCCGAGGGTCGCGCAGCCCACT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp GCGGTAGCTGGTCTGGGCCTGCTCGGGGCCCGCGTCCCGCTCGGCGTCCGGCTCTCCGAGGCGGCCGCATaGAGCTCAAGCGAGGCGCGC +
Preference number: 4 (lower is better)
Translates to: AVAGLGLLGARVPLGVRLSEAAA*SSSEAR
Trigger: GCGCGCCTCGCTTGAGCTGCATGCGGCCGCCTCGGA...GAGCCGGACGCCGAGCGGGACGCGGGCCCCGAGCAGGCCCAGACCAGCTACCGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR GCA 90 bp GCCTCCCGGCCCAGGGCGGCGAACTCGTCTGCGACCGTTAGCGCCCCGCGGCCCCCGGGGTCGCTGTGCTaGCGGCCACGCTGCCACTGT +
Preference number: 4 (lower is better)
Translates to: ASRPRAANSSATVSAPRPPGSLC*RPRCHC
Trigger: ACAGTGGCAGCGTGGCCGGCAGCACAGCGACCCCGG...GGGCCGCGGGGCGCTAACGGTCGCAGACGAGTTCGCCGCCCTGGGCCGGGAGGC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp CAGGTCGCGGTAGCTGGTCTGGGCCTGCTCGGGGCCCGCGTCCCGCTCGGCGTCGCTCGCTCCTCCCGCTaGCTCGGCCGCCTCTGCCGA +
Preference number: 4 (lower is better)
Translates to: QVAVAGLGLLGARVPLGVARSSR*LGRLCR
Trigger: TCGGCAGAGGCGGCCGAGGCAGCGGGAGGAGCGAGC...GACGCCGAGCGGGACGCGGGCCCCGAGCAGGCCCAGACCAGCTACCGCGACCTG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591127.1
CDS-3UTR CCA 90 bp CGCGGTAGCTGGTCTGGGCCTGCTCGGGGCCCGCGTCCCGCTCGGCGTCCGGCTCCATCCAGGCTGGCATaGCGGCGCAGGCGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: RGSWSGPARGPRPARRPAPSRLA*RRRRVR
Trigger: CCTCACCCGCCTGCGCCGCCATGCCAGCCTGGATGG...AGCCGGACGCCGAGCGGGACGCGGGCCCCGAGCAGGCCCAGACCAGCTACCGCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000591127.1
ENST00000648750.1
CDS-3UTR CCA 90 bp GGCTCCTCCTCGATGACGGGGATGGCGGGGTCGTCGCCGGCGCCGCCCAGGGTGTGGCCCCATCCAGGCTaGCATGGCGGCGCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: GSSSMTGMAGSSPAPPRVWPHPG*HGGAGG
Trigger: CCCGCCTGCGCCGCCATGCCAGCCTGGATGGGGCCA...CACCCTGGGCGGCGCCGGCGACGACCCCGCCATCCCCGTCATCGAGGAGGAGCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR CCA 90 bp GAGCCGCCTCCCGGCCCAGGGCGGCGAACTCGTCTGCGACCGTTAGCGCCCCGCCCAGCCTTGGGAGCATaGGCGGGGCGGGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: EPPPGPGRRTRLRPLAPRPALGA*AGRGWE
Trigger: CTCCCACCCCCGCCCCGCCCATGCTCCCAAGGCTGG...GCGGGGCGCTAACGGTCGCAGACGAGTTCGCCGCCCTGGGCCGGGAGGCGGCTC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR CCA 90 bp GGATGGTGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCACATGCGGAGGGCAGTaGGGACTCGGGGCGCGGGAG +
Preference number: 4 (lower is better)
Translates to: GWCRRGGDSEGAVRARPPTCGGQ*GLGARE
Trigger: CTCCCGCGCCCCGAGTCCCCACTGCCCTCCGCATGT...GGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCACCATCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR TCA 90 bp AGCTGGTCTGGGCCTGCTCGGGGCCCGCGTCCCGCTCGGCGTCCGGCTCCAGTGACAGCGCCGCCTCATTaGAGGAGACCCGGCGGCCCG +
Preference number: 4 (lower is better)
Translates to: SWSGPARGPRPARRPAPVTAPPH*RRPGGP
Trigger: CGGGCCGCCGGGTCTCCTTCAATGAGGCGGCGCTGT...CACTGGAGCCGGACGCCGAGCGGGACGCGGGCCCCGAGCAGGCCCAGACCAGCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000591127.1
ENST00000648750.1
CDS-3UTR TCA 90 bp GGCTCCACAGGTCGCGGTAGCTGGTCTGGGCCTGCTCGGGGCCCGCGTCCCGCTCGGCAGTCACGGTGTTaGGCCGCCTCCCGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GSTGRGSWSGPARGPRPARQSRC*AASRPR
Trigger: CCTGGGCCGGGAGGCGGCTCAACACCGTGACTGCCG...AGCGGGACGCGGGCCCCGAGCAGGCCCAGACCAGCTACCGCGACCTGTGGAGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR GCA 90 bp GGCGCGCAGGCTCCACAGGTCGCGGTAGCTGGTCTGGGCCTGCTCGGGGCCCGCCTGCAGAACGGTACCTaGCCCGGATCCCGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: GAQAPQVAVAGLGLLGARLQNGT*PGSRAR
Trigger: GCGGGCCCGGGATCCGGGGCAGGTACCGTTCTGCAG...GCGGGCCCCGAGCAGGCCCAGACCAGCTACCGCGACCTGTGGAGCCTGCGCGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000591127.1
ENST00000648750.1
CDS-3UTR GCA 90 bp GGCTCCACAGGTCGCGGTAGCTGGTCTGGGCCTGCTCGGGGCCCGCGTCCCGCTGGCTCCAGTGGCGGCTaGTGCTGCTCAGGCCCCGCG +
Preference number: 4 (lower is better)
Translates to: GSTGRGSWSGPARGPRPAGSSGG*CCSGPA
Trigger: CGCGGGGCCTGAGCAGCAGCAGCCGCCACTGGAGCC...AGCGGGACGCGGGCCCCGAGCAGGCCCAGACCAGCTACCGCGACCTGTGGAGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000591127.1
ENST00000648750.1
CDS-3UTR GCA 90 bp CGCCATCGCGGGATGGTGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCTCCGAGGCGGCCGCATaGAGCTCAAGCGAGGCGCGC +
Preference number: 4 (lower is better)
Translates to: RHRGMVQTRRGLGGCRAGSEAAA*SSSEAR
Trigger: GCGCGCCTCGCTTGAGCTGCATGCGGCCGCCTCGGA...GCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCACCATCCCGCGATGGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp GGGCGCGGTGTCGCGCGGCAGCCGGCGTGTCGTCGAAGTGCGGGTCGTGGCGCACCGAGCTGTCGCCGCTaGGCACCGAGTCGCGGTCGT +
Preference number: 4 (lower is better)
Translates to: GRGVARQPACRRSAGRGAPSCRR*APSRGR
Trigger: ACGACCGCGACTCGGTGCGCAGCGGCGACAGCTCGG...TGCGCCACGACCCGCACTTCGACGACACGCCGGCTGCCGCGCGACACCGCGCCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR GCA 90 bp GCCATCGCGGGATGGTGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGCCGAGCTGTCGCCGCTaGGCACCGAGTCGCGGTCGT +
Preference number: 4 (lower is better)
Translates to: AIAGWCRRGGDSEGAVRAPSCRR*APSRGR
Trigger: ACGACCGCGACTCGGTGCGCAGCGGCGACAGCTCGG...CGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCACCATCCCGCGATGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp CGAACTCGTCTGCGACCGTTAGCGCCCCGCGGCCCCCGCCCGGGCGAGCTCGCGCGCCGCGGCCCTCGATaGTGGCGTAGCCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: RTRLRPLAPRGPRPGELARRGPR*WRSHCP
Trigger: TGGACAGTGGCTACGCCAGCATCGAGGGCCGCGGCG...CGCGAGCTCGCCCGGGCGGGGGCCGCGGGGCGCTAACGGTCGCAGACGAGTTCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp GCCATCGCGGGATGGTGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGCTCGGTGTCGTCGCCTaGGCCGCGGCCCTCGATGCT +
Preference number: 4 (lower is better)
Translates to: AIAGWCRRGGDSEGAVRALGVVA*AAALDA
Trigger: AGCATCGAGGGCCGCGGCGCAGGCGACGACACCGAG...CGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCACCATCCCGCGATGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp GCCGCCTCTAGCCTGCCGAGAGCAGGGGGCGGGCTGGCCAGAAAGGGGCGGGGGCACGCTGCCACTGTTTaGGGGCGTGCGGGTGCGCGC +
Preference number: 4 (lower is better)
Translates to: AASSLPRAGGGLARKGRGHAATV*GRAGAR
Trigger: GCGCGCACCCGCACGCCCGCAAACAGTGGCAGCGTG...CCCCCGCCCCTTTCTGGCCAGCCCGCCCCCTGCTCTCGGCAGGCTAGAGGCGGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000648750.1
CDS-3UTR GCA 90 bp GGTGGCGGCGCGGTTATTGCTCGGAGGCGGCGCGGGCTGCCGCCAGCACACGCCCACGCTGCCACTGTTTaGGGGCGTGCGGGTGCGCGC +
Preference number: 4 (lower is better)
Translates to: GGGAVIARRRRGLPPAHAHAATV*GRAGAR
Trigger: GCGCGCACCCGCACGCCCGCAAACAGTGGCAGCGTG...GGCGTGTGCTGGCGGCAGCCCGCGCCGCCTCCGAGCAATAACCGCGCCGCCACC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp GCCTCCCGGCCCAGGGCGGCGAACTCGTCTGCGACCGTTAGCGCCCCGCGGCCCACTCGGAGGGTGCCGTaGGGGCGAGGCCGCCCAAAT +
Preference number: 4 (lower is better)
Translates to: ASRPRAANSSATVSAPRPTRRVP*GRGRPN
Trigger: ATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGT...GGGCCGCGGGGCGCTAACGGTCGCAGACGAGTTCGCCGCCCTGGGCCGGGAGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp AGTGGGCTGCGCGACCCTCGGGTGGCGGGCCCTGCGACTAAGCGGCCGCCCCGTGCCATCGCGGGATGGTaGAGACGCGGCGGGGACTCG +
Preference number: 4 (lower is better)
Translates to: SGLRDPRVAGPATKRPPRAIAGW*RRGGDS
Trigger: CGAGTCCCCGCCGCGTCTGCACCATCCCGCGATGGC...ACGGGGCGGCCGCTTAGTCGCAGGGCCCGCCACCCGAGGGTCGCGCAGCCCACT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp GGATGGTGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCGCCCTGTTGAGGCGCTaGTGGACGTCCCAGCAGCGC +
Preference number: 4 (lower is better)
Translates to: GWCRRGGDSEGAVRARPPALLRR*WTSQQR
Trigger: GCGCTGCTGGGACGTCCACCAGCGCCTCAACAGGGC...GGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCACCATCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp GCGCGTCCGTCTTCTCGTCGATGCTGTAGTCGCGGCGCGGGCGGCGGGGCCAGGTGGCCCCATCCAGGCTaGCATGGCGGCGCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: ARPSSRRCCSRGAGGGARWPHPG*HGGAGG
Trigger: CCCGCCTGCGCCGCCATGCCAGCCTGGATGGGGCCA...CCTGGCCCCGCCGCCCGCGCCGCGACTACAGCATCGACGAGAAGACGGACGCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR CCA 90 bp GGCTCCACAGGTCGCGGTAGCTGGTCTGGGCCTGCTCGGGGCCCGCGTCCCGCTTGGCCCCATCCAGGCTaGCATGGCGGCGCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: GSTGRGSWSGPARGPRPAWPHPG*HGGAGG
Trigger: CCCGCCTGCGCCGCCATGCCAGCCTGGATGGGGCCA...AGCGGGACGCGGGCCCCGAGCAGGCCCAGACCAGCTACCGCGACCTGTGGAGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000591127.1
ENST00000648750.1
CDS-3UTR CCA 90 bp CGCGGTAGCTGGTCTGGGCCTGCTCGGGGCCCGCGTCCCGCTCGGCGTCCGGCTACAGGTCGCGGTAGCTaGTCTGGGCCTGCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: RGSWSGPARGPRPARRPATGRGS*SGPARG
Trigger: GCCCCGAGCAGGCCCAGACCAGCTACCGCGACCTGT...AGCCGGACGCCGAGCGGGACGCGGGCCCCGAGCAGGCCCAGACCAGCTACCGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000591127.1
ENST00000648750.1
CDS-3UTR CCA 90 bp GGCTCCTCCTCGATGACGGGGATGGCGGGGTCGTCGCCGGCGCCGCCCAGGGTGGACGCGGGTGGGACTTaGGACTCGGGCGGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: GSSSMTGMAGSSPAPPRVDAGGT*DSGGPW
Trigger: CCAAGGCCCGCCCGAGTCCCAAGTCCCACCCGCGTC...CACCCTGGGCGGCGCCGGCGACGACCCCGCCATCCCCGTCATCGAGGAGGAGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR CCA 90 bp CGTCCCGCTCGGCGTCCGGCTCCAGTGGCGGCTGCTGCTGCTCAGGCCCCGCGCAACGCCATCGCGGGATaGTGCAGACGCGGCGGGGAC +
Preference number: 4 (lower is better)
Translates to: RPARRPAPVAAAAAQAPRNAIAG*CRRGGD
Trigger: GTCCCCGCCGCGTCTGCACCATCCCGCGATGGCGTT...GCGCGGGGCCTGAGCAGCAGCAGCCGCCACTGGAGCCGGACGCCGAGCGGGACG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR TCA 90 bp GCCATCGCGGGATGGTGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGCCTCCATGGCCCTGTTaGGGCGCTGGTGGACGTCCC +
Preference number: 4 (lower is better)
Translates to: AIAGWCRRGGDSEGAVRAPPWPC*GAGGRP
Trigger: GGGACGTCCACCAGCGCCTCAACAGGGCCATGGAGG...CGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCACCATCCCGCGATGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR TCA 90 bp CGCCATCGCGGGATGGTGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGGCGGCGCAGGCGGGTaGGGAACTGCAGAACGGTAC +
Preference number: 4 (lower is better)
Translates to: RHRGMVQTRRGLGGCRAGGGAGG*GTAERY
Trigger: GTACCGTTCTGCAGTTCCTCACCCGCCTGCGCCGCC...GCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCACCATCCCGCGATGGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR TCA 90 bp GGCGCGCAGGCTCCACAGGTCGCGGTAGCTGGTCTGGGCCTGCTCGGGGCCCGCCGCCCCGTCCGGGACTaGGGGCGAGTGATCGTTGTC +
Preference number: 4 (lower is better)
Translates to: GAQAPQVAVAGLGLLGARRPVRD*GRVIVV
Trigger: GACAACGATCACTCGCCCTCAGTCCCGGACGGGGCG...GCGGGCCCCGAGCAGGCCCAGACCAGCTACCGCGACCTGTGGAGCCTGCGCGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR TCA 90 bp GCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAATTTGCGGCAGTCACGGTGTTaGGCCGCCTCCCGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: ADAAGTRRVPCGRGRPNLRQSRC*AASRPR
Trigger: CCTGGGCCGGGAGGCGGCTCAACACCGTGACTGCCG...CAAATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp CGCCATCGCGGGATGGTGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCTCACTGGCTGCCCGCTaGCGCTGGAAGTGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: RHRGMVQTRRGLGGCRAGSLAAR*RWKWCR
Trigger: GCGGCACCACTTCCAGCGGCAGCGGGCAGCCAGTGA...GCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCACCATCCCGCGATGGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp CGTCCCGCTCGGCGTCCGGCTCCAGTGGCGGCTGCTGCTGCTCAGGCCCCGCGCCGTGCTCTCACTGGCTaGCCGCTGCCGCTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: RPARRPAPVAAAAAQAPRRALTG*PLPLEV
Trigger: CACTTCCAGCGGCAGCGGGCAGCCAGTGAGAGCACG...GCGCGGGGCCTGAGCAGCAGCAGCCGCCACTGGAGCCGGACGCCGAGCGGGACG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000591127.1
ENST00000648750.1
CDS-3UTR GCA 90 bp GCGCGTCCGTCTTCTCGTCGATGCTGTAGTCGCGGCGCGGGCGGCGGGGCCAGGTCCAGTGGCGGCTGCTaGTGCTCAGGCCCCGCGCTG +
Preference number: 4 (lower is better)
Translates to: ARPSSRRCCSRGAGGGARSSGGC*CSGPAL
Trigger: CAGCGCGGGGCCTGAGCAGCAGCAGCCGCCACTGGA...CCTGGCCCCGCCGCCCGCGCCGCGACTACAGCATCGACGAGAAGACGGACGCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR GCA 90 bp CGCCATCGCGGGATGGTGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCCCGAGTCGCGGTCGTTaGCGCTGCTGCTGTGGTCCG +
Preference number: 4 (lower is better)
Translates to: RHRGMVQTRRGLGGCRAGPSRGR*RCCCGP
Trigger: CGGACCACAGCAGCAGCGGCAACGACCGCGACTCGG...GCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCACCATCCCGCGATGGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp CGCGGCAGGTGGCTCGGTGTCGTCGCCTGCGCCGCGGCCCTCGATGCTGGCGTACACGCTGCCACTGTTTaGGGGCGTGCGGGTGCGCGC +
Preference number: 4 (lower is better)
Translates to: RGRWLGVVACAAALDAGVHAATV*GRAGAR
Trigger: GCGCGCACCCGCACGCCCGCAAACAGTGGCAGCGTG...TACGCCAGCATCGAGGGCCGCGGCGCAGGCGACGACACCGAGCCACCTGCCGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR GCA 90 bp CGTCCGTCTTCTCGTCGATGCTGTAGTCGCGGCGCGGGCGGCGGGGCCAGGCGCTGGCGGCGCGGTTATTaGTCGGAGGCGGCGCGGGCT +
Preference number: 4 (lower is better)
Translates to: RPSSRRCCSRGAGGGARRWRRGY*SEAARA
Trigger: AGCCCGCGCCGCCTCCGAGCAATAACCGCGCCGCCA...GCGCCTGGCCCCGCCGCCCGCGCCGCGACTACAGCATCGACGAGAAGACGGACG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR CCA 90 bp GGATGGTGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCTGGTGGTGGCGGCTGTaGCCATGGTGGCTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: GWCRRGGDSEGAVRARPPWWWRL*PWWLWA
Trigger: AGCCCACAGCCACCATGGCCACAGCCGCCACCACCA...GGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCACCATCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp GGCTCCTCCTCGATGACGGGGATGGCGGGGTCGTCGCCGGCGCCGCCCAGGGTGGGCGGCCCGTGGAGCTaGTGGACAGGAAGCGTTCGG +
Preference number: 4 (lower is better)
Translates to: GSSSMTGMAGSSPAPPRVGGPWS*WTGSVR
Trigger: CCGAACGCTTCCTGTCCACCAGCTCCACGGGCCGCC...CACCCTGGGCGGCGCCGGCGACGACCCCGCCATCCCCGTCATCGAGGAGGAGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR CCA 90 bp CGTCTTCTCGTCGATGCTGTAGTCGCGGCGCGGGCGGCGGGGCCAGGCGCGCGGGTTGTAGGGGTCACCTaGCAGGGCGGAGCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: RLLVDAVVAARAAGPGARVVGVT*QGGAGA
Trigger: GGCCCCAGCTCCGCCCTGCCAGGTGACCCCTACAAC...CCGCGCGCCTGGCCCCGCCGCCCGCGCCGCGACTACAGCATCGACGAGAAGACG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR CCA 90 bp CTCCCGCCGCCGAGGCCCCGTGCGGCGCCGGAGAAGCTGCCAGAGAGATGGGCCGTTGTAGGGGTCACCTaGCAGGGCGGAGCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: LPPPRPRAAPEKLPERWAVVGVT*QGGAGA
Trigger: GGCCCCAGCTCCGCCCTGCCAGGTGACCCCTACAAC...GGCCCATCTCTCTGGCAGCTTCTCCGGCGCCGCACGGGGCCTCGGCGGCGGGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp CGGCGCGGTTATTGCTCGGAGGCGGCGCGGGCTGCCGCCAGCACACGCCGCAGTCCATCCAGGCTGGCATaGCGGCGCAGGCGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: RRGYCSEAARAAASTRRSPSRLA*RRRRVR
Trigger: CCTCACCCGCCTGCGCCGCCATGCCAGCCTGGATGG...ACTGCGGCGTGTGCTGGCGGCAGCCCGCGCCGCCTCCGAGCAATAACCGCGCCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp CACGTCTCTCCCGCCGCCGAGGCCCCGTGCGGCGCCGGAGAAGCTGCCAGAGAGCCATCCAGGCTGGCATaGCGGCGCAGGCGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: HVSPAAEAPCGAGEAAREPSRLA*RRRRVR
Trigger: CCTCACCCGCCTGCGCCGCCATGCCAGCCTGGATGG...CTCTCTGGCAGCTTCTCCGGCGCCGCACGGGGCCTCGGCGGCGGGAGAGACGTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp GGTCGCGGTAGCTGGTCTGGGCCTGCTCGGGGCCCGCGTCCCGCTCGGCGTCCGCTCTCGTGTCCAGACTaGCTGCCCGCTGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: GRGSWSGPARGPRPARRPLSCPD*LPAGWA
Trigger: AGCCCAGCCAGCGGGCAGCCAGTCTGGACACGAGAG...CGGACGCCGAGCGGGACGCGGGCCCCGAGCAGGCCCAGACCAGCTACCGCGACC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000591127.1
ENST00000648750.1
CDS-3UTR CCA 90 bp CGGCGCGGTTATTGCTCGGAGGCGGCGCGGGCTGCCGCCAGCACACGCCGCAGTGGCGTCCGGCTCCAGTaGCGGCTGCTGCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: RRGYCSEAARAAASTRRSGVRLQ*RLLLLR
Trigger: CCTGAGCAGCAGCAGCCGCCACTGGAGCCGGACGCC...ACTGCGGCGTGTGCTGGCGGCAGCCCGCGCCGCCTCCGAGCAATAACCGCGCCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp CTCCCGCCGCCGAGGCCCCGTGCGGCGCCGGAGAAGCTGCCAGAGAGATGGGCCACAGGTCGCGGTAGCTaGTCTGGGCCTGCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: LPPPRPRAAPEKLPERWATGRGS*SGPARG
Trigger: GCCCCGAGCAGGCCCAGACCAGCTACCGCGACCTGT...GGCCCATCTCTCTGGCAGCTTCTCCGGCGCCGCACGGGGCCTCGGCGGCGGGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp GCCATCGCGGGATGGTGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGTTGCCGCTGCTGCTGTaGTCCGAGGCGGCCGCATGC +
Preference number: 4 (lower is better)
Translates to: AIAGWCRRGGDSEGAVRALPLLL*SEAAAC
Trigger: GCATGCGGCCGCCTCGGACCACAGCAGCAGCGGCAA...CGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCACCATCCCGCGATGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp GCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAATTTGTGTGGTCGGGGGACGTaGGGGCGGCGGCGACCAACG +
Preference number: 4 (lower is better)
Translates to: ADAAGTRRVPCGRGRPNLCGRGT*GRRRPT
Trigger: CGTTGGTCGCCGCCGCCCCCACGTCCCCCGACCACA...CAAATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp CGTCCGTCTTCTCGTCGATGCTGTAGTCGCGGCGCGGGCGGCGGGGCCAGGCGCGAGTCTGCCCAGCCTTaGGAGCATGGGCGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: RPSSRRCCSRGAGGGARRESAQP*EHGRGG
Trigger: CCCGCCCCGCCCATGCTCCCAAGGCTGGGCAGACTC...GCGCCTGGCCCCGCCGCCCGCGCCGCGACTACAGCATCGACGAGAAGACGGACG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR CCA 90 bp GGTGGCGGCGCGGTTATTGCTCGGAGGCGGCGCGGGCTGCCGCCAGCACACGCCAGGGTGCCTCCATGCTaGACTGCAGACGGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: GGGAVIARRRRGLPPAHARVPPC*TADGGA
Trigger: GGCCCCGCCGTCTGCAGTCCAGCATGGAGGCACCCT...GGCGTGTGCTGGCGGCAGCCCGCGCCGCCTCCGAGCAATAACCGCGCCGCCACC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR CCA 90 bp TGGCAGGGCGGAGCTGGGGCCCACAGAGCGGCCGGTGAGGGCCTTCCCCGGGGGAGCTGCGCCCAGTCTTaGGCTGGGTGGGTGCCGTTG +
Preference number: 4 (lower is better)
Translates to: WQGGAGAHRAAGEGLPRGSCAQS*AGWVPL
Trigger: CAACGGCACCCACCCAGCCCAAGACTGGGCGCAGCT...CCCCCGGGGAAGGCCCTCACCGGCCGCTCTGTGGGCCCCAGCTCCGCCCTGCCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648750.1
CDS-3UTR TCA 90 bp CCGGAAAGAGCAGTGCACACTTCGGCGGCGCGAGGGCGGCCGGGGCTCTGCGCCCCTCCATGGCCCTGTTaGGGCGCTGGTGGACGTCCC +
Preference number: 4 (lower is better)
Translates to: PERAVHTSAARGRPGLCAPPWPC*GAGGRP
Trigger: GGGACGTCCACCAGCGCCTCAACAGGGCCATGGAGG...GGCGCAGAGCCCCGGCCGCCCTCGCGCCGCCGAAGTGTGCACTGCTCTTTCCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR TCA 90 bp CGCGGCCCGCGCCTCACGACGCCCAGCACCCGGCAAGCACCGGAAAGAGCAGTGACAGCGCCGCCTCATTaGAGGAGACCCGGCGGCCCG +
Preference number: 4 (lower is better)
Translates to: RGPRLTTPSTRQAPERAVTAPPH*RRPGGP
Trigger: CGGGCCGCCGGGTCTCCTTCAATGAGGCGGCGCTGT...CACTGCTCTTTCCGGTGCTTGCCGGGTGCTGGGCGTCGTGAGGCGCGGGCCGCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR TCA 90 bp CGGCGCGGTTATTGCTCGGAGGCGGCGCGGGCTGCCGCCAGCACACGCCGCAGTGGCGGCGCAGGCGGGTaGGGAACTGCAGAACGGTAC +
Preference number: 4 (lower is better)
Translates to: RRGYCSEAARAAASTRRSGGAGG*GTAERY
Trigger: GTACCGTTCTGCAGTTCCTCACCCGCCTGCGCCGCC...ACTGCGGCGTGTGCTGGCGGCAGCCCGCGCCGCCTCCGAGCAATAACCGCGCCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp GACGTGGGGGCGGCGGCGACCAACGCGGGAGTCGCCACGACGGGCTCGGCGAGGCGGCGACCCTTGTCCTaGGTCTTGCGGCTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: DVGAAATNAGVATTGSARRRPLS*VLRLCS
Trigger: TGAGCAGAGCCGCAAGACGCAGGACAAGGGTCGCCG...CCTCGCCGAGCCCGTCGTGGCGACTCCCGCGTTGGTCGCCGCCGCCCCCACGTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR GCA 90 bp GCCATCGCGGGATGGTGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGCGAGGGGCTGATCTCTaGGAAGTCAGTGGCGCCCGC +
Preference number: 4 (lower is better)
Translates to: AIAGWCRRGGDSEGAVRARGADL*EVSGAR
Trigger: GCGGGCGCCACTGACTTCGCAGAGATCAGCCCCTCG...CGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCACCATCCCGCGATGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp AGTGGGCTGCGCGACCCTCGGGTGGCGGGCCCTGCGACTAAGCGGCCGCCCCGTCGAGGGGCTGATCTCTaGGAAGTCAGTGGCGCCCGC +
Preference number: 4 (lower is better)
Translates to: SGLRDPRVAGPATKRPPRRGADL*EVSGAR
Trigger: GCGGGCGCCACTGACTTCGCAGAGATCAGCCCCTCG...ACGGGGCGGCCGCTTAGTCGCAGGGCCCGCCACCCGAGGGTCGCGCAGCCCACT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp CAGGTCGCGGTAGCTGGTCTGGGCCTGCTCGGGGCCCGCGTCCCGCTCGGCGTCCGTGCTCTCACTGGCTaGCCGCTGCCGCTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: QVAVAGLGLLGARVPLGVRALTG*PLPLEV
Trigger: CACTTCCAGCGGCAGCGGGCAGCCAGTGAGAGCACG...GACGCCGAGCGGGACGCGGGCCCCGAGCAGGCCCAGACCAGCTACCGCGACCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000591127.1
ENST00000648750.1
CDS-3UTR GCA 90 bp GCCATCGCGGGATGGTGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGCGTGCTCTCACTGGCTaGCCGCTGCCGCTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: AIAGWCRRGGDSEGAVRARALTG*PLPLEV
Trigger: CACTTCCAGCGGCAGCGGGCAGCCAGTGAGAGCACG...CGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCACCATCCCGCGATGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp GGCGCGCAGGCTCCACAGGTCGCGGTAGCTGGTCTGGGCCTGCTCGGGGCCCGCCCTCCTCCTGCTCCGTaGTCTCACTGGCTGCCCGCT +
Preference number: 4 (lower is better)
Translates to: GAQAPQVAVAGLGLLGARPPPAP*SHWLPA
Trigger: AGCGGGCAGCCAGTGAGAGCACGGAGCAGGAGGAGG...GCGGGCCCCGAGCAGGCCCAGACCAGCTACCGCGACCTGTGGAGCCTGCGCGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000591127.1
ENST00000648750.1
CDS-3UTR GCA 90 bp GGTGGCGGCGCGGTTATTGCTCGGAGGCGGCGCGGGCTGCCGCCAGCACACGCCCCTCCTCCTGCTCCGTaGTCTCACTGGCTGCCCGCT +
Preference number: 4 (lower is better)
Translates to: GGGAVIARRRRGLPPAHAPPPAP*SHWLPA
Trigger: AGCGGGCAGCCAGTGAGAGCACGGAGCAGGAGGAGG...GGCGTGTGCTGGCGGCAGCCCGCGCCGCCTCCGAGCAATAACCGCGCCGCCACC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp AGGCCCCGTGCGGCGCCGGAGAAGCTGCCAGAGAGATGGGCCCAGGACGCGGGATCCAGTGGCGGCTGCTaGTGCTCAGGCCCCGCGCTG +
Preference number: 4 (lower is better)
Translates to: RPRAAPEKLPERWAQDAGSSGGC*CSGPAL
Trigger: CAGCGCGGGGCCTGAGCAGCAGCAGCCGCCACTGGA...TCCCGCGTCCTGGGCCCATCTCTCTGGCAGCTTCTCCGGCGCCGCACGGGGCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp GCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAATTTGTCCAGTGGCGGCTGCTaGTGCTCAGGCCCCGCGCTG +
Preference number: 4 (lower is better)
Translates to: ADAAGTRRVPCGRGRPNLSSGGC*CSGPAL
Trigger: CAGCGCGGGGCCTGAGCAGCAGCAGCCGCCACTGGA...CAAATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp CGTCTTCTCGTCGATGCTGTAGTCGCGGCGCGGGCGGCGGGGCCAGGCGCGCGGCCGTCTTCTCGTCGATaGTGTAGTCGCGGCGCGGGC +
Preference number: 4 (lower is better)
Translates to: RLLVDAVVAARAAGPGARPSSRR*CSRGAG
Trigger: GCCCGCGCCGCGACTACAGCATCGACGAGAAGACGG...CCGCGCGCCTGGCCCCGCCGCCCGCGCCGCGACTACAGCATCGACGAGAAGACG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR GCA 90 bp GAGCCGCCTCCCGGCCCAGGGCGGCGAACTCGTCTGCGACCGTTAGCGCCCCGCGGCGTGTCGTCGAAGTaGGGGTCGTGGCGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: EPPPGPGRRTRLRPLAPRGVSSK*GSWRRN
Trigger: GTTCCTGCGCCACGACCCGCACTTCGACGACACGCC...GCGGGGCGCTAACGGTCGCAGACGAGTTCGCCGCCCTGGGCCGGGAGGCGGCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp GGGCGCGGTGTCGCGCGGCAGCCGGCGTGTCGTCGAAGTGCGGGTCGTGGCGCAAGCAGGGTGCCTCCATaGTGGACTGCAGACGGCGGG +
Preference number: 4 (lower is better)
Translates to: GRGVARQPACRRSAGRGASRVPP*WTADGG
Trigger: CCCGCCGTCTGCAGTCCAGCATGGAGGCACCCTGCT...TGCGCCACGACCCGCACTTCGACGACACGCCGGCTGCCGCGCGACACCGCGCCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR GCA 90 bp GCGGTAGCTGGTCTGGGCCTGCTCGGGGCCCGCGTCCCGCTCGGCGTCCGGCTCCACCGGAAAGAGCAGTaGACACTTCGGCGGCGCGAG +
Preference number: 4 (lower is better)
Translates to: AVAGLGLLGARVPLGVRLHRKEQ*TLRRRE
Trigger: CTCGCGCCGCCGAAGTGTGCACTGCTCTTTCCGGTG...GAGCCGGACGCCGAGCGGGACGCGGGCCCCGAGCAGGCCCAGACCAGCTACCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR CCA 90 bp GCGGTAGCTGGTCTGGGCCTGCTCGGGGCCCGCGTCCCGCTCGGCGTCCGGCTCTGGCGGCTGTGGCCATaGTGGCTGTGGGCTGCATTC +
Preference number: 4 (lower is better)
Translates to: AVAGLGLLGARVPLGVRLWRLWP*WLWAAF
Trigger: GAATGCAGCCCACAGCCACCATGGCCACAGCCGCCA...GAGCCGGACGCCGAGCGGGACGCGGGCCCCGAGCAGGCCCAGACCAGCTACCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR CCA 90 bp AAGAGCAGTGCACACTTCGGCGGCGCGAGGGCGGCCGGGGCTCTGCGCCTGCGCGCCCTGTTGAGGCGCTaGTGGACGTCCCAGCAGCGC +
Preference number: 4 (lower is better)
Translates to: KSSAHFGGARAAGALRLRALLRR*WTSQQR
Trigger: GCGCTGCTGGGACGTCCACCAGCGCCTCAACAGGGC...GCGCAGGCGCAGAGCCCCGGCCGCCCTCGCGCCGCCGAAGTGTGCACTGCTCTT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp AGTGGGCTGCGCGACCCTCGGGTGGCGGGCCCTGCGACTAAGCGGCCGCCCCGTTCGGTCTCCGCATCCTaGCACTCGGGGTCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: SGLRDPRVAGPATKRPPRSVSAS*HSGSSP
Trigger: GGGAGAGGACCCCGAGTGCCAGGATGCGGAGACCGA...ACGGGGCGGCCGCTTAGTCGCAGGGCCCGCCACCCGAGGGTCGCGCAGCCCACT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp GCCATCGCGGGATGGTGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGTCGGTCTCCGCATCCTaGCACTCGGGGTCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: AIAGWCRRGGDSEGAVRASVSAS*HSGSSP
Trigger: GGGAGAGGACCCCGAGTGCCAGGATGCGGAGACCGA...CGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCACCATCCCGCGATGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp GCCTCCCGGCCCAGGGCGGCGAACTCGTCTGCGACCGTTAGCGCCCCGCGGCCCGGCCCGTGGAGCTGGTaGACAGGAAGCGTTCGGTCT +
Preference number: 4 (lower is better)
Translates to: ASRPRAANSSATVSAPRPGPWSW*TGSVRS
Trigger: AGACCGAACGCTTCCTGTCCACCAGCTCCACGGGCC...GGGCCGCGGGGCGCTAACGGTCGCAGACGAGTTCGCCGCCCTGGGCCGGGAGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp CGAACTCGTCTGCGACCGTTAGCGCCCCGCGGCCCCCGCCCGGGCGAGCTCGCGGCGTGGTGGCTGAGCTaGCCTCGCCTGAGTCACACT +
Preference number: 4 (lower is better)
Translates to: RTRLRPLAPRGPRPGELAAWWLS*PRLSHT
Trigger: AGTGTGACTCAGGCGAGGCCAGCTCAGCCACCACGC...CGCGAGCTCGCCCGGGCGGGGGCCGCGGGGCGCTAACGGTCGCAGACGAGTTCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp CCGGAAAGAGCAGTGCACACTTCGGCGGCGCGAGGGCGGCCGGGGCTCTGCGCCGCTCCGTGCTCTCACTaGCTGCCCGCTGCCGCTGGA +
Preference number: 4 (lower is better)
Translates to: PERAVHTSAARGRPGLCAAPCSH*LPAAAG
Trigger: TCCAGCGGCAGCGGGCAGCCAGTGAGAGCACGGAGC...GGCGCAGAGCCCCGGCCGCCCTCGCGCCGCCGAAGTGTGCACTGCTCTTTCCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp CACGTCTCTCCCGCCGCCGAGGCCCCGTGCGGCGCCGGAGAAGCTGCCAGAGAGACAGGTCGCGGTAGCTaGTCTGGGCCTGCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: HVSPAAEAPCGAGEAARETGRGS*SGPARG
Trigger: GCCCCGAGCAGGCCCAGACCAGCTACCGCGACCTGT...CTCTCTGGCAGCTTCTCCGGCGCCGCACGGGGCCTCGGCGGCGGGAGAGACGTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp CGCGGCAGGTGGCTCGGTGTCGTCGCCTGCGCCGCGGCCCTCGATGCTGGCGTATTGCCGCTGCTGCTGTaGTCCGAGGCGGCCGCATGC +
Preference number: 4 (lower is better)
Translates to: RGRWLGVVACAAALDAGVLPLLL*SEAAAC
Trigger: GCATGCGGCCGCCTCGGACCACAGCAGCAGCGGCAA...TACGCCAGCATCGAGGGCCGCGGCGCAGGCGACGACACCGAGCCACCTGCCGCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR CCA 90 bp CGTCCCGCTCGGCGTCCGGCTCCAGTGGCGGCTGCTGCTGCTCAGGCCCCGCGCCGCGGCCCTCGATGCTaGCGTAGCCACTGTCCATCT +
Preference number: 4 (lower is better)
Translates to: RPARRPAPVAAAAAQAPRRGPRC*RSHCPS
Trigger: AGATGGACAGTGGCTACGCCAGCATCGAGGGCCGCG...GCGCGGGGCCTGAGCAGCAGCAGCCGCCACTGGAGCCGGACGCCGAGCGGGACG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR CCA 90 bp CTGCGCCGCGGCCCTCGATGCTGGCGTAGCCACTGTCCATCTGCAGCAGCCGGCCGTGTCCACGGGGCCTaGAGAGCGCTCCCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: LRRGPRCWRSHCPSAAAGRVHGA*RALPGP
Trigger: CGGCCCAGGGAGCGCTCTCCAGGCCCCGTGGACACG...GCCGGCTGCTGCAGATGGACAGTGGCTACGCCAGCATCGAGGGCCGCGGCGCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR CCA 90 bp CCGCGGCCCGCGCCTCACGACGCCCAGCACCCGGCAAGCACCGGAAAGAGCAGTCTCCATCGGGCCCAGTaGGCTGCGCGACCCTCGGGT +
Preference number: 4 (lower is better)
Translates to: PRPAPHDAQHPASTGKSSLHRAQ*AARPSG
Trigger: ACCCGAGGGTCGCGCAGCCCACTGGGCCCGATGGAG...ACTGCTCTTTCCGGTGCTTGCCGGGTGCTGGGCGTCGTGAGGCGCGGGCCGCGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp CCGGAAAGAGCAGTGCACACTTCGGCGGCGCGAGGGCGGCCGGGGCTCTGCGCCAACGCCATCGCGGGATaGTGCAGACGCGGCGGGGAC +
Preference number: 4 (lower is better)
Translates to: PERAVHTSAARGRPGLCANAIAG*CRRGGD
Trigger: GTCCCCGCCGCGTCTGCACCATCCCGCGATGGCGTT...GGCGCAGAGCCCCGGCCGCCCTCGCGCCGCCGAAGTGTGCACTGCTCTTTCCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR TCA 90 bp GGTGGCGGCGCGGTTATTGCTCGGAGGCGGCGCGGGCTGCCGCCAGCACACGCCGCAGGTGCAGGTGCGTaGGCCGGGCATTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: GGGAVIARRRRGLPPAHAAGAGA*AGHSSG
Trigger: ACCTGAAGAATGCCCGGCTCACGCACCTGCACCTGC...GGCGTGTGCTGGCGGCAGCCCGCGCCGCCTCCGAGCAATAACCGCGCCGCCACC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR TCA 90 bp CTCCCGCCGCCGAGGCCCCGTGCGGCGCCGGAGAAGCTGCCAGAGAGATGGGCCGCAGGTGCAGGTGCGTaGGCCGGGCATTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: LPPPRPRAAPEKLPERWAAGAGA*AGHSSG
Trigger: ACCTGAAGAATGCCCGGCTCACGCACCTGCACCTGC...GGCCCATCTCTCTGGCAGCTTCTCCGGCGCCGCACGGGGCCTCGGCGGCGGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR TCA 90 bp ACAGCGCGTCCGTCTTCTCGTCGATGCTGTAGTCGCGGCGCGGGCGGCGGGGCCAGTGGCGCCCGCGGCTaGGTTGTAGGGGTCACCTGG +
Preference number: 4 (lower is better)
Translates to: TARPSSRRCCSRGAGGGASGARG*VVGVTW
Trigger: CCAGGTGACCCCTACAACTCAGCCGCGGGCGCCACT...GGCCCCGCCGCCCGCGCCGCGACTACAGCATCGACGAGAAGACGGACGCGCTGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR TCA 90 bp AAGAGCAGTGCACACTTCGGCGGCGCGAGGGCGGCCGGGGCTCTGCGCCTGCGCTGGACTGGACGCGGTTaGGTCCAGCTCAGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: KSSAHFGGARAAGALRLRWTGRG*VQLSPC
Trigger: GCAGGGGCTGAGCTGGACTCAACCGCGTCCAGTCCA...GCGCAGGCGCAGAGCCCCGGCCGCCCTCGCGCCGCCGAAGTGTGCACTGCTCTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR GCA 90 bp AGCTGGTCTGGGCCTGCTCGGGGCCCGCGTCCCGCTCGGCGTCCGGCTCCAGTGCGGCGACCCTTGTCCTaGGTCTTGCGGCTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: SWSGPARGPRPARRPAPVRRPLS*VLRLCS
Trigger: TGAGCAGAGCCGCAAGACGCAGGACAAGGGTCGCCG...CACTGGAGCCGGACGCCGAGCGGGACGCGGGCCCCGAGCAGGCCCAGACCAGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000591127.1
ENST00000648750.1
CDS-3UTR GCA 90 bp CGAACTCGTCTGCGACCGTTAGCGCCCCGCGGCCCCCGCCCGGGCGAGCTCGCGCCCAGAGTCGCTAGATaGCGAGGGGCTGATCTCTGC +
Preference number: 4 (lower is better)
Translates to: RTRLRPLAPRGPRPGELAPRVAR*RGADLC
Trigger: GCAGAGATCAGCCCCTCGGCATCTAGCGACTCTGGG...CGCGAGCTCGCCCGGGCGGGGGCCGCGGGGCGCTAACGGTCGCAGACGAGTTCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp GGCTCCTCCTCGATGACGGGGATGGCGGGGTCGTCGCCGGCGCCGCCCAGGGTGTGCCGCTGGAAGTGGTaGCGCTTGGGGGAACCTCTC +
Preference number: 4 (lower is better)
Translates to: GSSSMTGMAGSSPAPPRVCRWKW*RLGEPL
Trigger: GAGAGGTTCCCCCAAGCGGCACCACTTCCAGCGGCA...CACCCTGGGCGGCGCCGGCGACGACCCCGCCATCCCCGTCATCGAGGAGGAGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR GCA 90 bp CGCGGCCCGCGCCTCACGACGCCCAGCACCCGGCAAGCACCGGAAAGAGCAGTGTCACTGGCTGCCCGCTaGCGCTGGAAGTGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: RGPRLTTPSTRQAPERAVSLAAR*RWKWCR
Trigger: GCGGCACCACTTCCAGCGGCAGCGGGCAGCCAGTGA...CACTGCTCTTTCCGGTGCTTGCCGGGTGCTGGGCGTCGTGAGGCGCGGGCCGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp ACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAATTTGGCAAGGTCGTTGCCGCTGCTaGTGTGGTCCGAGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: TRRGLGGCRAGEAAQIWQGRCRC*CGPRRP
Trigger: CGGCCGCCTCGGACCACAGCAGCAGCGGCAACGACC...TTGCCAAATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp ACAGCGCGTCCGTCTTCTCGTCGATGCTGTAGTCGCGGCGCGGGCGGCGGGGCCCGCCGCGGCCCTCGATaGTGGCGTAGCCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: TARPSSRRCCSRGAGGGARRGPR*WRSHCP
Trigger: TGGACAGTGGCTACGCCAGCATCGAGGGCCGCGGCG...GGCCCCGCCGCCCGCGCCGCGACTACAGCATCGACGAGAAGACGGACGCGCTGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR GCA 90 bp AGGCCCCGTGCGGCGCCGGAGAAGCTGCCAGAGAGATGGGCCCAGGACGCGGGACGCCGCGGCCCTCGATaGTGGCGTAGCCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: RPRAAPEKLPERWAQDAGRRGPR*WRSHCP
Trigger: TGGACAGTGGCTACGCCAGCATCGAGGGCCGCGGCG...TCCCGCGTCCTGGGCCCATCTCTCTGGCAGCTTCTCCGGCGCCGCACGGGGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp TGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAATTTCTCGGTGTCGTCGCCTaGGCCGCGGCCCTCGATGCT +
Preference number: 4 (lower is better)
Translates to: CRRGGDSEGAVRARPPKFLGVVA*AAALDA
Trigger: AGCATCGAGGGCCGCGGCGCAGGCGACGACACCGAG...AAATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp ACAGCGCGTCCGTCTTCTCGTCGATGCTGTAGTCGCGGCGCGGGCGGCGGGGCCCGGGCGCCGTTGACATaGGGAGGGCAGTGGGGACTC +
Preference number: 4 (lower is better)
Translates to: TARPSSRRCCSRGAGGGARAPLT*GGQWGL
Trigger: GAGTCCCCACTGCCCTCCGCATGTCAACGGCGCCCG...GGCCCCGCCGCCCGCGCCGCGACTACAGCATCGACGAGAAGACGGACGCGCTGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR GCA 90 bp CGCGGCCCGCGCCTCACGACGCCCAGCACCCGGCAAGCACCGGAAAGAGCAGTGCGGGCGCCGTTGACATaGGGAGGGCAGTGGGGACTC +
Preference number: 4 (lower is better)
Translates to: RGPRLTTPSTRQAPERAVRAPLT*GGQWGL
Trigger: GAGTCCCCACTGCCCTCCGCATGTCAACGGCGCCCG...CACTGCTCTTTCCGGTGCTTGCCGGGTGCTGGGCGTCGTGAGGCGCGGGCCGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp CGTCCCGCTCGGCGTCCGGCTCCAGTGGCGGCTGCTGCTGCTCAGGCCCCGCGCTCGTCAGGGCTACTGTaGCAGTGGTGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: RPARRPAPVAAAAAQAPRSSGLL*QWWWWW
Trigger: CCACCACCACCACCACTGCCACAGTAGCCCTGACGA...GCGCGGGGCCTGAGCAGCAGCAGCCGCCACTGGAGCCGGACGCCGAGCGGGACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR CCA 90 bp CGTCTTCTCGTCGATGCTGTAGTCGCGGCGCGGGCGGCGGGGCCAGGCGCGCGGGGTCTGGCTCTGCCGTaGGGCGTCCAGTGGCATTGT +
Preference number: 4 (lower is better)
Translates to: RLLVDAVVAARAAGPGARGLALP*GVQWHC
Trigger: ACAATGCCACTGGACGCCCCACGGCAGAGCCAGACC...CCGCGCGCCTGGCCCCGCCGCCCGCGCCGCGACTACAGCATCGACGAGAAGACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR CCA 90 bp CGAACTCGTCTGCGACCGTTAGCGCCCCGCGGCCCCCGCCCGGGCGAGCTCGCGCGTAGTTGTCCAGGATaGGGTCTGGCTCTGCCGTGG +
Preference number: 4 (lower is better)
Translates to: RTRLRPLAPRGPRPGELARSCPG*GLALPW
Trigger: CCACGGCAGAGCCAGACCCCATCCTGGACAACTACG...CGCGAGCTCGCCCGGGCGGGGGCCGCGGGGCGCTAACGGTCGCAGACGAGTTCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp AGTGGGCTGCGCGACCCTCGGGTGGCGGGCCCTGCGACTAAGCGGCCGCCCCGTGGCCCGTGGAGCTGGTaGACAGGAAGCGTTCGGTCT +
Preference number: 4 (lower is better)
Translates to: SGLRDPRVAGPATKRPPRGPWSW*TGSVRS
Trigger: AGACCGAACGCTTCCTGTCCACCAGCTCCACGGGCC...ACGGGGCGGCCGCTTAGTCGCAGGGCCCGCCACCCGAGGGTCGCGCAGCCCACT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp AAGAGCAGTGCACACTTCGGCGGCGCGAGGGCGGCCGGGGCTCTGCGCCTGCGCGTCGGGGTCTTGGGCTaGGTGGGTGCCGTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: KSSAHFGGARAAGALRLRVGVLG*VGAVVQ
Trigger: CTGGACAACGGCACCCACCCAGCCCAAGACCCCGAC...GCGCAGGCGCAGAGCCCCGGCCGCCCTCGCGCCGCCGAAGTGTGCACTGCTCTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000650044.1
CDS-3UTR CCA 90 bp CCGGAAAGAGCAGTGCACACTTCGGCGGCGCGAGGGCGGCCGGGGCTCTGCGCCCGGAAGTCGGGGTCTTaGGCTGGGTGGGTGCCGTTG +
Preference number: 4 (lower is better)
Translates to: PERAVHTSAARGRPGLCARKSGS*AGWVPL
Trigger: CAACGGCACCCACCCAGCCCAAGACCCCGACTTCCG...GGCGCAGAGCCCCGGCCGCCCTCGCGCCGCCGAAGTGTGCACTGCTCTTTCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000650044.1
CDS-3UTR CCA 90 bp TGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAATTTGGAGAGGTGGCCGGGTaGGGCGTGGTGGCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: CRRGGDSEGAVRARPPKFGEVAG*GVVAEL
Trigger: CAGCTCAGCCACCACGCCCCACCCGGCCACCTCTCC...AAATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp ACAGCGCGTCCGTCTTCTCGTCGATGCTGTAGTCGCGGCGCGGGCGGCGGGGCCTGGCCAGAGTGGCCTTaGGAGAGGTGGCCGGGTGGG +
Preference number: 4 (lower is better)
Translates to: TARPSSRRCCSRGAGGGAWPEWP*ERWPGG
Trigger: CCCACCCGGCCACCTCTCCCAAGGCCACTCTGGCCA...GGCCCCGCCGCCCGCGCCGCGACTACAGCATCGACGAGAAGACGGACGCGCTGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR CCA 90 bp GCGGTAGCTGGTCTGGGCCTGCTCGGGGCCCGCGTCCCGCTCGGCGTCCGGCTCCAGCCTTGGTGCTCCTaGTACCGGCATCCAACGAGG +
Preference number: 4 (lower is better)
Translates to: AVAGLGLLGARVPLGVRLQPWCS*YRHPTR
Trigger: CCTCGTTGGATGCCGGTACCAGGAGCACCAAGGCTG...GAGCCGGACGCCGAGCGGGACGCGGGCCCCGAGCAGGCCCAGACCAGCTACCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000591127.1
ENST00000648750.1
CDS-3UTR CCA 90 bp GCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAATTTGGCAATATGGCCCCATCCAGGCTaGCATGGCGGCGCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: AAGTRRVPCGRGRPNLAIWPHPG*HGGAGG
Trigger: CCCGCCTGCGCCGCCATGCCAGCCTGGATGGGGCCA...TATTGCCAAATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp CGAACTCGTCTGCGACCGTTAGCGCCCCGCGGCCCCCGCCCGGGCGAGCTCGCGGGAAGTGGTGCCGCTTaGGGGAACCTCTCGTGTCCA +
Preference number: 4 (lower is better)
Translates to: RTRLRPLAPRGPRPGELAGSGAA*GNLSCP
Trigger: TGGACACGAGAGGTTCCCCCAAGCGGCACCACTTCC...CGCGAGCTCGCCCGGGCGGGGGCCGCGGGGCGCTAACGGTCGCAGACGAGTTCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp TGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAATTTGCTGCCCGCTGCCGCTaGAAGTGGTGCCGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: CRRGGDSEGAVRARPPKFAARCR*KWCRLG
Trigger: CCCCAAGCGGCACCACTTCCAGCGGCAGCGGGCAGC...AAATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp AGGCCCCGTGCGGCGCCGGAGAAGCTGCCAGAGAGATGGGCCCAGGACGCGGGAGCTCCGTGCTCTCACTaGCTGCCCGCTGCCGCTGGA +
Preference number: 4 (lower is better)
Translates to: RPRAAPEKLPERWAQDAGAPCSH*LPAAAG
Trigger: TCCAGCGGCAGCGGGCAGCCAGTGAGAGCACGGAGC...TCCCGCGTCCTGGGCCCATCTCTCTGGCAGCTTCTCCGGCGCCGCACGGGGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp CAGGTCGCGGTAGCTGGTCTGGGCCTGCTCGGGGCCCGCGTCCCGCTCGGCGTCTGGATGAAGTCCTCCTaGGGGGCATCCCCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: QVAVAGLGLLGARVPLGVWMKSS*GASPSS
Trigger: GGAGGAGGGGGATGCCCCCCAGGAGGACTTCATCCA...GACGCCGAGCGGGACGCGGGCCCCGAGCAGGCCCAGACCAGCTACCGCGACCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000591127.1
ENST00000648750.1
CDS-3UTR CCA 90 bp GGCTCCTCCTCGATGACGGGGATGGCGGGGTCGTCGCCGGCGCCGCCCAGGGTGTGGATGAAGTCCTCCTaGGGGGCATCCCCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GSSSMTGMAGSSPAPPRVWMKSS*GASPSS
Trigger: GGAGGAGGGGGATGCCCCCCAGGAGGACTTCATCCA...CACCCTGGGCGGCGCCGGCGACGACCCCGCCATCCCCGTCATCGAGGAGGAGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR CCA 90 bp GCGGTAGCTGGTCTGGGCCTGCTCGGGGCCCGCGTCCCGCTCGGCGTCCGGCTCGCCCGGGCAATGTACTaGATGAAGTCCTCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: AVAGLGLLGARVPLGVRLARAMY*MKSSWG
Trigger: CCCCCAGGAGGACTTCATCCAGTACATTGCCCGGGC...GAGCCGGACGCCGAGCGGGACGCGGGCCCCGAGCAGGCCCAGACCAGCTACCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000591127.1
ENST00000648750.1
CDS-3UTR CCA 90 bp TGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAATTTGGCGTCCGGCTCCAGTaGCGGCTGCTGCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: CRRGGDSEGAVRARPPKFGVRLQ*RLLLLR
Trigger: CCTGAGCAGCAGCAGCCGCCACTGGAGCCGGACGCC...AAATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp GCCCAGCACCCGGCAAGCACCGGAAAGAGCAGTGCACACTTCGGCGGCGCGAGGTGTGGTCGGGGGACGTaGGGGCGGCGGCGACCAACG +
Preference number: 4 (lower is better)
Translates to: AQHPASTGKSSAHFGGARCGRGT*GRRRPT
Trigger: CGTTGGTCGCCGCCGCCCCCACGTCCCCCGACCACA...CCTCGCGCCGCCGAAGTGTGCACTGCTCTTTCCGGTGCTTGCCGGGTGCTGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp GGCTCCTCCTCGATGACGGGGATGGCGGGGTCGTCGCCGGCGCCGCCCAGGGTGAAGTTGCCCTTGGGTTaGGGGAGGGGTGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: GSSSMTGMAGSSPAPPRVKLPLG*GRGAAG
Trigger: GCCAGCAGCACCCCTCCCCCAACCCAAGGGCAACTT...CACCCTGGGCGGCGCCGGCGACGACCCCGCCATCCCCGTCATCGAGGAGGAGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR CCA 90 bp CGCGGCAGGTGGCTCGGTGTCGTCGCCTGCGCCGCGGCCCTCGATGCTGGCGTACCCATCCCACCGACGTaGGCCCTGGGCTTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: RGRWLGVVACAAALDAGVPIPPT*ALGFRE
Trigger: TTCCCTGAAGCCCAGGGCCCACGTCGGTGGGATGGG...TACGCCAGCATCGAGGGCCGCGGCGCAGGCGACGACACCGAGCCACCTGCCGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR TCA 90 bp GGCTCCACAGGTCGCGGTAGCTGGTCTGGGCCTGCTCGGGGCCCGCGTCCCGCTCAGCACACGCCGCAGTaGGGTAAACGGTCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: GSTGRGSWSGPARGPRPAQHTPQ*GKRSRR
Trigger: CCTCCGAGACCGTTTACCTCACTGCGGCGTGTGCTG...AGCGGGACGCGGGCCCCGAGCAGGCCCAGACCAGCTACCGCGACCTGTGGAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR GCA 90 bp GGTGGCGGCGCGGTTATTGCTCGGAGGCGGCGCGGGCTGCCGCCAGCACACGCCTGCGTCTTGCGGCTCTaGTCAAACAGCGCCGCCTCA +
Preference number: 4 (lower is better)
Translates to: GGGAVIARRRRGLPPAHACVLRL*SNSAAS
Trigger: TGAGGCGGCGCTGTTTGAGCAGAGCCGCAAGACGCA...GGCGTGTGCTGGCGGCAGCCCGCGCCGCCTCCGAGCAATAACCGCGCCGCCACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp AAGGCCACGGCGTCGCCCGCCCGGGCAATGTACTGGATGAAGTCCTCCTGGGGGAGTGGCGGCTGCTGCTaGTCAGGCCCCGCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: KATASPARAMYWMKSSWGSGGCC*SGPALP
Trigger: GGGCAGCGCGGGGCCTGAGCAGCAGCAGCCGCCACT...CCCCCAGGAGGACTTCATCCAGTACATTGCCCGGGCGGGCGACGCCGTGGCCTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
CDS-3UTR GCA 90 bp AAACGGTCTCGGAGGTCGGCAGTCACGGTGTTGAGCCGCCTCCCGGCCCAGGGCTCCGAGGCGGCCGCATaGAGCTCAAGCGAGGCGCGC +
Preference number: 4 (lower is better)
Translates to: KRSRRSAVTVLSRLPAQGSEAAA*SSSEAR
Trigger: GCGCGCCTCGCTTGAGCTGCATGCGGCCGCCTCGGA...GCCCTGGGCCGGGAGGCGGCTCAACACCGTGACTGCCGACCTCCGAGACCGTTT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp CGACGCCCAGCACCCGGCAAGCACCGGAAAGAGCAGTGCACACTTCGGCGGCGCGGTCGTTGCCGCTGCTaGTGTGGTCCGAGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: RRPAPGKHRKEQCTLRRRGRCRC*CGPRRP
Trigger: CGGCCGCCTCGGACCACAGCAGCAGCGGCAACGACC...GCGCCGCCGAAGTGTGCACTGCTCTTTCCGGTGCTTGCCGGGTGCTGGGCGTCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp GCTCAAGCGAGGCGCGCAGGCTCCACAGGTCGCGGTAGCTGGTCTGGGCCTGCTCGCGGTCGTTGCCGCTaGTGCTGTGGTCCGAGGCGG +
Preference number: 4 (lower is better)
Translates to: AQARRAGSTGRGSWSGPARGRCR*CCGPRR
Trigger: CCGCCTCGGACCACAGCAGCAGCGGCAACGACCGCG...AGCAGGCCCAGACCAGCTACCGCGACCTGTGGAGCCTGCGCGCCTCGCTTGAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR GCA 90 bp CGCGGCCCTCGATGCTGGCGTAGCCACTGTCCATCTGCAGCAGCCGGCGCGCCTCCGAGTCGCGGTCGTTaGCGCTGCTGCTGTGGTCCG +
Preference number: 4 (lower is better)
Translates to: RGPRCWRSHCPSAAAGAPPSRGR*RCCCGP
Trigger: CGGACCACAGCAGCAGCGGCAACGACCGCGACTCGG...AGGCGCGCCGGCTGCTGCAGATGGACAGTGGCTACGCCAGCATCGAGGGCCGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR GCA 90 bp GCCCAGCACCCGGCAAGCACCGGAAAGAGCAGTGCACACTTCGGCGGCGCGAGGCCGAGCTGTCGCCGCTaGGCACCGAGTCGCGGTCGT +
Preference number: 4 (lower is better)
Translates to: AQHPASTGKSSAHFGGARPSCRR*APSRGR
Trigger: ACGACCGCGACTCGGTGCGCAGCGGCGACAGCTCGG...CCTCGCGCCGCCGAAGTGTGCACTGCTCTTTCCGGTGCTTGCCGGGTGCTGGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp AGGCCCCGTGCGGCGCCGGAGAAGCTGCCAGAGAGATGGGCCCAGGACGCGGGACCGTCTTCTCGTCGATaGTGTAGTCGCGGCGCGGGC +
Preference number: 4 (lower is better)
Translates to: RPRAAPEKLPERWAQDAGPSSRR*CSRGAG
Trigger: GCCCGCGCCGCGACTACAGCATCGACGAGAAGACGG...TCCCGCGTCCTGGGCCCATCTCTCTGGCAGCTTCTCCGGCGCCGCACGGGGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp GGCGAGGCGCGGCGGAAAGAGTCTCTCGTCGAGGCCAGCCGCCAGCTTGTCCAGCCGGGGTCGCTGTGCTaGCGGCCACGCTGCCACTGT +
Preference number: 4 (lower is better)
Translates to: GEARRKESLVEASRQLVQPGSLC*RPRCHC
Trigger: ACAGTGGCAGCGTGGCCGGCAGCACAGCGACCCCGG...CTGGACAAGCTGGCGGCTGGCCTCGACGAGAGACTCTTTCCGCCGCGCCTCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR GCA 90 bp GCCATCGCGGGATGGTGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGCCAGCAGGAGGACAGTaGACAGACGTGAGGGTCACC +
Preference number: 4 (lower is better)
Translates to: AIAGWCRRGGDSEGAVRAPAGGQ*TDVRVT
Trigger: GGTGACCCTCACGTCTGTGCACTGTCCTCCTGCTGG...CGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCACCATCCCGCGATGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR GCA 90 bp CTGCGCCGCGGCCCTCGATGCTGGCGTAGCCACTGTCCATCTGCAGCAGCCGGCACTCGGAGGGTGCCGTaGGGGCGAGGCCGCCCAAAT +
Preference number: 4 (lower is better)
Translates to: LRRGPRCWRSHCPSAAAGTRRVP*GRGRPN
Trigger: ATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGT...GCCGGCTGCTGCAGATGGACAGTGGCTACGCCAGCATCGAGGGCCGCGGCGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR CCA 90 bp CGTCCGTCTTCTCGTCGATGCTGTAGTCGCGGCGCGGGCGGCGGGGCCAGGCGCGGCTGCATTCTGAACTaGGGAGGAGGGCCCTCAGCG +
Preference number: 4 (lower is better)
Translates to: RPSSRRCCSRGAGGGARRGCILN*GGGPSA
Trigger: CGCTGAGGGCCCTCCTCCCCAGTTCAGAATGCAGCC...GCGCCTGGCCCCGCCGCCCGCGCCGCGACTACAGCATCGACGAGAAGACGGACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR CCA 90 bp CGGCGCGGTTATTGCTCGGAGGCGGCGCGGGCTGCCGCCAGCACACGCCGCAGTTGGCGGCTGTGGCCATaGTGGCTGTGGGCTGCATTC +
Preference number: 4 (lower is better)
Translates to: RRGYCSEAARAAASTRRSWRLWP*WLWAAF
Trigger: GAATGCAGCCCACAGCCACCATGGCCACAGCCGCCA...ACTGCGGCGTGTGCTGGCGGCAGCCCGCGCCGCCTCCGAGCAATAACCGCGCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp GGCTCCACAGGTCGCGGTAGCTGGTCTGGGCCTGCTCGGGGCCCGCGTCCCGCTGGTCTGGCTCTGCCGTaGGGCGTCCAGTGGCATTGT +
Preference number: 4 (lower is better)
Translates to: GSTGRGSWSGPARGPRPAGLALP*GVQWHC
Trigger: ACAATGCCACTGGACGCCCCACGGCAGAGCCAGACC...AGCGGGACGCGGGCCCCGAGCAGGCCCAGACCAGCTACCGCGACCTGTGGAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR CCA 90 bp ACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAATTTGGCAAGCCCTGTTGAGGCGCTaGTGGACGTCCCAGCAGCGC +
Preference number: 4 (lower is better)
Translates to: TRRGLGGCRAGEAAQIWQALLRR*WTSQQR
Trigger: GCGCTGCTGGGACGTCCACCAGCGCCTCAACAGGGC...TTGCCAAATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp GCGCGTCCGTCTTCTCGTCGATGCTGTAGTCGCGGCGCGGGCGGCGGGGCCAGGGGCCCGTGGAGCTGGTaGACAGGAAGCGTTCGGTCT +
Preference number: 4 (lower is better)
Translates to: ARPSSRRCCSRGAGGGARGPWSW*TGSVRS
Trigger: AGACCGAACGCTTCCTGTCCACCAGCTCCACGGGCC...CCTGGCCCCGCCGCCCGCGCCGCGACTACAGCATCGACGAGAAGACGGACGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR CCA 90 bp CGGGTGAGGAACTGCAGAACGGTACCTGCCCCGGATCCCGGGCCCGCCTCCCCAAGACCCGGCGGCCCGTaGAGCTGGTGGACAGGAAGC +
Preference number: 4 (lower is better)
Translates to: RVRNCRTVPAPDPGPASPRPGGP*SWWTGS
Trigger: GCTTCCTGTCCACCAGCTCCACGGGCCGCCGGGTCT...TGGGGAGGCGGGCCCGGGATCCGGGGCAGGTACCGTTCTGCAGTTCCTCACCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648750.1
CDS-3UTR CCA 90 bp GAGCCGCCTCCCGGCCCAGGGCGGCGAACTCGTCTGCGACCGTTAGCGCCCCGCCGGGCATTCTTCAGGTaGTGGAAGTCCCCCTCCGTC +
Preference number: 4 (lower is better)
Translates to: EPPPGPGRRTRLRPLAPRRAFFR*WKSPSV
Trigger: GACGGAGGGGGACTTCCACCACCTGAAGAATGCCCG...GCGGGGCGCTAACGGTCGCAGACGAGTTCGCCGCCCTGGGCCGGGAGGCGGCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp GACGTGGGGGCGGCGGCGACCAACGCGGGAGTCGCCACGACGGGCTCGGCGAGGCGGAGAATTTATGAATaGAGAGCGCGGCGCGGGGGA +
Preference number: 4 (lower is better)
Translates to: DVGAAATNAGVATTGSARRRIYE*RARRGG
Trigger: TCCCCCGCGCCGCGCTCTCCATTCATAAATTCTCCG...CCTCGCCGAGCCCGTCGTGGCGACTCCCGCGTTGGTCGCCGCCGCCCCCACGTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR CCA 90 bp CTCCCGCTGCCTCGGCCGCCTCTGCCGAGAGCAGGGGGCGGGCTGGCCAGAAAGGCGTGGTGGCTGAGCTaGCCTCGCCTGAGTCACACT +
Preference number: 4 (lower is better)
Translates to: LPLPRPPLPRAGGGLARKAWWLS*PRLSHT
Trigger: AGTGTGACTCAGGCGAGGCCAGCTCAGCCACCACGC...CTTTCTGGCCAGCCCGCCCCCTGCTCTCGGCAGAGGCGGCCGAGGCAGCGGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591127.1
CDS-3UTR CCA 90 bp CACGACGCCCAGCACCCGGCAAGCACCGGAAAGAGCAGTGCACACTTCGGCGGCTGGCCGGGTGGGGCGTaGTGGCTGAGCTGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: HDAQHPASTGKSSAHFGGWPGGA*WLSWPR
Trigger: GCGAGGCCAGCTCAGCCACCACGCCCCACCCGGCCA...GCCGCCGAAGTGTGCACTGCTCTTTCCGGTGCTTGCCGGGTGCTGGGCGTCGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp GCTCAAGCGAGGCGCGCAGGCTCCACAGGTCGCGGTAGCTGGTCTGGGCCTGCTGGAGAGGTGGCCGGGTaGGGCGTGGTGGCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: AQARRAGSTGRGSWSGPAGEVAG*GVVAEL
Trigger: CAGCTCAGCCACCACGCCCCACCCGGCCACCTCTCC...AGCAGGCCCAGACCAGCTACCGCGACCTGTGGAGCCTGCGCGCCTCGCTTGAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000591127.1
ENST00000648750.1
CDS-3UTR CCA 90 bp ACAGCGCGTCCGTCTTCTCGTCGATGCTGTAGTCGCGGCGCGGGCGGCGGGGCCCTCTCGTGTCCAGACTaGCTGCCCGCTGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: TARPSSRRCCSRGAGGGALSCPD*LPAGWA
Trigger: AGCCCAGCCAGCGGGCAGCCAGTCTGGACACGAGAG...GGCCCCGCCGCCCGCGCCGCGACTACAGCATCGACGAGAAGACGGACGCGCTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR CCA 90 bp GGCGAGGCGCGGCGGAAAGAGTCTCTCGTCGAGGCCAGCCGCCAGCTTGTCCAGGCTGCCCGCTGCCGCTaGAAGTGGTGCCGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: GEARRKESLVEASRQLVQAARCR*KWCRLG
Trigger: CCCCAAGCGGCACCACTTCCAGCGGCAGCGGGCAGC...CTGGACAAGCTGGCGGCTGGCCTCGACGAGAGACTCTTTCCGCCGCGCCTCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR CCA 90 bp TGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAATTTTTGCCGCTGCTGCTGTaGTCCGAGGCGGCCGCATGC +
Preference number: 4 (lower is better)
Translates to: CRRGGDSEGAVRARPPKFLPLLL*SEAAAC
Trigger: GCATGCGGCCGCCTCGGACCACAGCAGCAGCGGCAA...AAATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp CGCGGCCCTCGATGCTGGCGTAGCCACTGTCCATCTGCAGCAGCCGGCGCGCCTGGGGAGGGGTGCTGCTaGCCGGAGTGGTCACAGCAG +
Preference number: 4 (lower is better)
Translates to: RGPRCWRSHCPSAAAGAPGEGCC*PEWSQQ
Trigger: CTGCTGTGACCACTCCGGCCAGCAGCACCCCTCCCC...AGGCGCGCCGGCTGCTGCAGATGGACAGTGGCTACGCCAGCATCGAGGGCCGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR CCA 90 bp GCCCGCGCCTCACGACGCCCAGCACCCGGCAAGCACCGGAAAGAGCAGTGCACATGCGCGACCCTCGGGTaGCGGGCCCTGCGACTAAGC +
Preference number: 4 (lower is better)
Translates to: ARASRRPAPGKHRKEQCTCATLG*RALRLS
Trigger: GCTTAGTCGCAGGGCCCGCCACCCGAGGGTCGCGCA...TGTGCACTGCTCTTTCCGGTGCTTGCCGGGTGCTGGGCGTCGTGAGGCGCGGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp CGACGCCCAGCACCCGGCAAGCACCGGAAAGAGCAGTGCACACTTCGGCGGCGCTGCGCGACCCTCGGGTaGCGGGCCCTGCGACTAAGC +
Preference number: 4 (lower is better)
Translates to: RRPAPGKHRKEQCTLRRRCATLG*RALRLS
Trigger: GCTTAGTCGCAGGGCCCGCCACCCGAGGGTCGCGCA...GCGCCGCCGAAGTGTGCACTGCTCTTTCCGGTGCTTGCCGGGTGCTGGGCGTCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR TCA 90 bp CCGCGGCCCGCGCCTCACGACGCCCAGCACCCGGCAAGCACCGGAAAGAGCAGTCTGTGGGCTGCATTCTaGACTGGGGAGGAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: PRPAPHDAQHPASTGKSSLWAAF*TGEEGP
Trigger: AGGGCCCTCCTCCCCAGTTCAGAATGCAGCCCACAG...ACTGCTCTTTCCGGTGCTTGCCGGGTGCTGGGCGTCGTGAGGCGCGGGCCGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR TCA 90 bp CCCATCCAGGCTGGCATGGCGGCGCAGGCGGGTGAGGAACTGCAGAACGGTACCACAGCGCCGCCTCATTaGAGGAGACCCGGCGGCCCG +
Preference number: 4 (lower is better)
Translates to: PIQAGMAAQAGEELQNGTTAPPH*RRPGGP
Trigger: CGGGCCGCCGGGTCTCCTTCAATGAGGCGGCGCTGT...GGTACCGTTCTGCAGTTCCTCACCCGCCTGCGCCGCCATGCCAGCCTGGATGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
CDS-3UTR TCA 90 bp CACGTCTCTCCCGCCGCCGAGGCCCCGTGCGGCGCCGGAGAAGCTGCCAGAGAGGACAGTGCACAGACGTaGGGGTCACCCGCCATACCA +
Preference number: 4 (lower is better)
Translates to: HVSPAAEAPCGAGEAAREDSAQT*GSPAIP
Trigger: TGGTATGGCGGGTGACCCTCACGTCTGTGCACTGTC...CTCTCTGGCAGCTTCTCCGGCGCCGCACGGGGCCTCGGCGGCGGGAGAGACGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR TCA 90 bp GCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAATTTGGCAATACGCCCCGTCCGGGACTaGGGGCGAGTGATCGTTGTC +
Preference number: 4 (lower is better)
Translates to: AAGTRRVPCGRGRPNLAIRPVRD*GRVIVV
Trigger: GACAACGATCACTCGCCCTCAGTCCCGGACGGGGCG...TATTGCCAAATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp AGCTGGTCTGGGCCTGCTCGGGGCCCGCGTCCCGCTCGGCGTCCGGCTCCAGTGCCTTGTCCTGCGTCTTaGGGCTCTGCTCAAACAGCG +
Preference number: 4 (lower is better)
Translates to: SWSGPARGPRPARRPAPVPCPAS*GSAQTA
Trigger: CGCTGTTTGAGCAGAGCCGCAAGACGCAGGACAAGG...CACTGGAGCCGGACGCCGAGCGGGACGCGGGCCCCGAGCAGGCCCAGACCAGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000591127.1
ENST00000648750.1
CDS-3UTR GCA 90 bp CTGCGCCGCGGCCCTCGATGCTGGCGTAGCCACTGTCCATCTGCAGCAGCCGGCGGCGGCAGGTGCAGGTaGGTGAGCCGGGCATTCTTC +
Preference number: 4 (lower is better)
Translates to: LRRGPRCWRSHCPSAAAGGGRCR*VSRAFF
Trigger: GAAGAATGCCCGGCTCACGCACCTGCACCTGCCGCC...GCCGGCTGCTGCAGATGGACAGTGGCTACGCCAGCATCGAGGGCCGCGGCGCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR GCA 90 bp ACAGCGCGTCCGTCTTCTCGTCGATGCTGTAGTCGCGGCGCGGGCGGCGGGGCCAGGCGGGTGAGGAACTaGAGAACGGTACCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: TARPSSRRCCSRGAGGGARRVRN*RTVPAP
Trigger: CGGGGCAGGTACCGTTCTGCAGTTCCTCACCCGCCT...GGCCCCGCCGCCCGCGCCGCGACTACAGCATCGACGAGAAGACGGACGCGCTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR GCA 90 bp CGCGGCCCGCGCCTCACGACGCCCAGCACCCGGCAAGCACCGGAAAGAGCAGTGAGGCGGGTGAGGAACTaGAGAACGGTACCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: RGPRLTTPSTRQAPERAVRRVRN*RTVPAP
Trigger: CGGGGCAGGTACCGTTCTGCAGTTCCTCACCCGCCT...CACTGCTCTTTCCGGTGCTTGCCGGGTGCTGGGCGTCGTGAGGCGCGGGCCGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp GGTGCCGCTTGGGGGAACCTCTCGTGTCCAGACTGGCTGCCCGCTGGCTGGGCTCGTGTCCAGACTGGCTaGCCGCTGGCTGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GAAWGNLSCPDWLPAGWARVQTG*PLAGLQ
Trigger: CTGGAGCCCAGCCAGCGGGCAGCCAGTCTGGACACG...AGCCCAGCCAGCGGGCAGCCAGTCTGGACACGAGAGGTTCCCCCAAGCGGCACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
CDS-3UTR GCA 90 bp AAGCGGCCGCCCCGTCCGGGACTGAGGGCGAGTGATCGTTGTCCTCAGGAGCCCCGTGTCCAGACTGGCTaGCCGCTGGCTGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: KRPPRPGLRASDRCPQEPRVQTG*PLAGLQ
Trigger: CTGGAGCCCAGCCAGCGGGCAGCCAGTCTGGACACG...GGGCTCCTGAGGACAACGATCACTCGCCCTCAGTCCCGGACGGGGCGGCCGCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp CCGCATGCAGCTCAAGCGAGGCGCGCAGGCTCCACAGGTCGCGGTAGCTGGTCTTCCAGTGGCGGCTGCTaGTGCTCAGGCCCCGCGCTG +
Preference number: 4 (lower is better)
Translates to: PHAAQARRAGSTGRGSWSSSGGC*CSGPAL
Trigger: CAGCGCGGGGCCTGAGCAGCAGCAGCCGCCACTGGA...AGACCAGCTACCGCGACCTGTGGAGCCTGCGCGCCTCGCTTGAGCTGCATGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000591127.1
ENST00000648750.1
CDS-3UTR GCA 90 bp GCGCGGCGGAAAGAGTCTCTCGTCGAGGCCAGCCGCCAGCTTGTCCAGCACCGACGCGGTCGTTGCCGCTaGTGCTGTGGTCCGAGGCGG +
Preference number: 4 (lower is better)
Translates to: ARRKESLVEASRQLVQHRRGRCR*CCGPRR
Trigger: CCGCCTCGGACCACAGCAGCAGCGGCAACGACCGCG...TCGGTGCTGGACAAGCTGGCGGCTGGCCTCGACGAGAGACTCTTTCCGCCGCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR GCA 90 bp AGTGGGCTGCGCGACCCTCGGGTGGCGGGCCCTGCGACTAAGCGGCCGCCCCGTCTACTGAAAAATACCTaGCGAGAGCAGGGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: SGLRDPRVAGPATKRPPRLLKNT*REQGAG
Trigger: GCCCGCCCCCTGCTCTCGGCAGGTATTTTTCAGTAG...ACGGGGCGGCCGCTTAGTCGCAGGGCCCGCCACCCGAGGGTCGCGCAGCCCACT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR GCA 90 bp CGCCATCGCGGGATGGTGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCCAGGCTAGGGCTCTCTaGCCACCCATGCTGGATAAC +
Preference number: 4 (lower is better)
Translates to: RHRGMVQTRRGLGGCRAGQARAL*PPMLDN
Trigger: GTTATCCAGCATGGGTGGGCAGAGAGCCCTAGCCTG...GCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCACCATCCCGCGATGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR GCA 90 bp CGGAGAAGCTGCCAGAGAGATGGGCCCAGGACGCGGGACTTAGGCCGGGCTGTGGCCTCCATGCTGGACTaGAGACGGCGGGGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: RRSCQRDGPRTRDLGRAVASMLD*RRRGPL
Trigger: GAGGGGGCCCCGCCGTCTGCAGTCCAGCATGGAGGC...CACAGCCCGGCCTAAGTCCCGCGTCCTGGGCCCATCTCTCTGGCAGCTTCTCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR GCA 90 bp CGCGGCCCGCGCCTCACGACGCCCAGCACCCGGCAAGCACCGGAAAGAGCAGTGCACCGGAAAGAGCAGTaGACACTTCGGCGGCGCGAG +
Preference number: 4 (lower is better)
Translates to: RGPRLTTPSTRQAPERAVHRKEQ*TLRRRE
Trigger: CTCGCGCCGCCGAAGTGTGCACTGCTCTTTCCGGTG...CACTGCTCTTTCCGGTGCTTGCCGGGTGCTGGGCGTCGTGAGGCGCGGGCCGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp GCCCGCGCCTCACGACGCCCAGCACCCGGCAAGCACCGGAAAGAGCAGTGCACACGGGCGCCGTTGACATaGGGAGGGCAGTGGGGACTC +
Preference number: 4 (lower is better)
Translates to: ARASRRPAPGKHRKEQCTRAPLT*GGQWGL
Trigger: GAGTCCCCACTGCCCTCCGCATGTCAACGGCGCCCG...TGTGCACTGCTCTTTCCGGTGCTTGCCGGGTGCTGGGCGTCGTGAGGCGCGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp ACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAATTTGGCAACCGTGGGGCGTCCAGTaGCATTGTCCCACGACGTCG +
Preference number: 4 (lower is better)
Translates to: TRRGLGGCRAGEAAQIWQPWGVQ*HCPTTS
Trigger: CGACGTCGTGGGACAATGCCACTGGACGCCCCACGG...TTGCCAAATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp AAACGGTCTCGGAGGTCGGCAGTCACGGTGTTGAGCCGCCTCCCGGCCCAGGGCGTCCAGGATGGGGTCTaGCTCTGCCGTGGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: KRSRRSAVTVLSRLPAQGVQDGV*LCRGAS
Trigger: GGACGCCCCACGGCAGAGCCAGACCCCATCCTGGAC...GCCCTGGGCCGGGAGGCGGCTCAACACCGTGACTGCCGACCTCCGAGACCGTTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp CGCCATCGCGGGATGGTGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCCCAGGTAGGTGGTGGTaGTCTTCTCCGCTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: RHRGMVQTRRGLGGCRAGPGRWW*SSPLPP
Trigger: TGGAGGAAGCGGAGAAGACCACCACCACCTACCTGG...GCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCACCATCCCGCGATGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp GGTCGCGGTAGCTGGTCTGGGCCTGCTCGGGGCCCGCGTCCCGCTCGGCGTCCGTGTCCAGGTAGGTGGTaGTGGTCTTCTCCGCTTCCT +
Preference number: 4 (lower is better)
Translates to: GRGSWSGPARGPRPARRPCPGRW*WSSPLP
Trigger: AGGAAGCGGAGAAGACCACCACCACCTACCTGGACA...CGGACGCCGAGCGGGACGCGGGCCCCGAGCAGGCCCAGACCAGCTACCGCGACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR CCA 90 bp AGGCCCCGTGCGGCGCCGGAGAAGCTGCCAGAGAGATGGGCCCAGGACGCGGGAGCGTGGTGGCTGAGCTaGCCTCGCCTGAGTCACACT +
Preference number: 4 (lower is better)
Translates to: RPRAAPEKLPERWAQDAGAWWLS*PRLSHT
Trigger: AGTGTGACTCAGGCGAGGCCAGCTCAGCCACCACGC...TCCCGCGTCCTGGGCCCATCTCTCTGGCAGCTTCTCCGGCGCCGCACGGGGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp TTGTTCGCGTCTCAACGTGGATGGGGCGGCAGCGGGGCGGGCGCCGTTGACATGGGAGAGGTGGCCGGGTaGGGCGTGGTGGCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: LFASQRGWGGSGAGAVDMGEVAG*GVVAEL
Trigger: CAGCTCAGCCACCACGCCCCACCCGGCCACCTCTCC...CATGTCAACGGCGCCCGCCCCGCTGCCGCCCCATCCACGTTGAGACGCGAACAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp GCCCAGCACCCGGCAAGCACCGGAAAGAGCAGTGCACACTTCGGCGGCGCGAGGGTTGTAGGGGTCACCTaGCAGGGCGGAGCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: AQHPASTGKSSAHFGGARVVGVT*QGGAGA
Trigger: GGCCCCAGCTCCGCCCTGCCAGGTGACCCCTACAAC...CCTCGCGCCGCCGAAGTGTGCACTGCTCTTTCCGGTGCTTGCCGGGTGCTGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp GCGCGTCCGTCTTCTCGTCGATGCTGTAGTCGCGGCGCGGGCGGCGGGGCCAGGTCTCTGCGAAGTCAGTaGCGCCCGCGGCTGAGTTGT +
Preference number: 4 (lower is better)
Translates to: ARPSSRRCCSRGAGGGARSLRSQ*RPRLSC
Trigger: ACAACTCAGCCGCGGGCGCCACTGACTTCGCAGAGA...CCTGGCCCCGCCGCCCGCGCCGCGACTACAGCATCGACGAGAAGACGGACGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR CCA 90 bp AAGGCCACGGCGTCGCCCGCCCGGGCAATGTACTGGATGAAGTCCTCCTGGGGGCCATCCAGGCTGGCATaGCGGCGCAGGCGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: KATASPARAMYWMKSSWGPSRLA*RRRRVR
Trigger: CCTCACCCGCCTGCGCCGCCATGCCAGCCTGGATGG...CCCCCAGGAGGACTTCATCCAGTACATTGCCCGGGCGGGCGACGCCGTGGCCTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
CDS-3UTR CCA 90 bp CGGCGCGGTTATTGCTCGGAGGCGGCGCGGGCTGCCGCCAGCACACGCCGCAGTGGAAGTGGTGCCGCTTaGGGGAACCTCTCGTGTCCA +
Preference number: 4 (lower is better)
Translates to: RRGYCSEAARAAASTRRSGSGAA*GNLSCP
Trigger: TGGACACGAGAGGTTCCCCCAAGCGGCACCACTTCC...ACTGCGGCGTGTGCTGGCGGCAGCCCGCGCCGCCTCCGAGCAATAACCGCGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp CGGAGAAGCTGCCAGAGAGATGGGCCCAGGACGCGGGACTTAGGCCGGGCTGTGGCTGCCCGCTGCCGCTaGAAGTGGTGCCGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: RRSCQRDGPRTRDLGRAVAARCR*KWCRLG
Trigger: CCCCAAGCGGCACCACTTCCAGCGGCAGCGGGCAGC...CACAGCCCGGCCTAAGTCCCGCGTCCTGGGCCCATCTCTCTGGCAGCTTCTCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR CCA 90 bp CCCATCCAGGCTGGCATGGCGGCGCAGGCGGGTGAGGAACTGCAGAACGGTACCGCTGCCCGCTGCCGCTaGAAGTGGTGCCGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: PIQAGMAAQAGEELQNGTAARCR*KWCRLG
Trigger: CCCCAAGCGGCACCACTTCCAGCGGCAGCGGGCAGC...GGTACCGTTCTGCAGTTCCTCACCCGCCTGCGCCGCCATGCCAGCCTGGATGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
CDS-3UTR CCA 90 bp AAGGCCACGGCGTCGCCCGCCCGGGCAATGTACTGGATGAAGTCCTCCTGGGGGGGCGTCCGGCTCCAGTaGCGGCTGCTGCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: KATASPARAMYWMKSSWGGVRLQ*RLLLLR
Trigger: CCTGAGCAGCAGCAGCCGCCACTGGAGCCGGACGCC...CCCCCAGGAGGACTTCATCCAGTACATTGCCCGGGCGGGCGACGCCGTGGCCTT
70% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
CDS-3UTR CCA 90 bp CCCATCCAGGCTGGCATGGCGGCGCAGGCGGGTGAGGAACTGCAGAACGGTACCGGCGTCCGGCTCCAGTaGCGGCTGCTGCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: PIQAGMAAQAGEELQNGTGVRLQ*RLLLLR
Trigger: CCTGAGCAGCAGCAGCCGCCACTGGAGCCGGACGCC...GGTACCGTTCTGCAGTTCCTCACCCGCCTGCGCCGCCATGCCAGCCTGGATGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
CDS-3UTR CCA 90 bp CTCCGTGCTCTCACTGGCTGCCCGCTGCCGCTGGAAGTGGTGCCGCTTGGGGGAACAGGTCGCGGTAGCTaGTCTGGGCCTGCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: LRALTGCPLPLEVVPLGGTGRGS*SGPARG
Trigger: GCCCCGAGCAGGCCCAGACCAGCTACCGCGACCTGT...TCCCCCAAGCGGCACCACTTCCAGCGGCAGCGGGCAGCCAGTGAGAGCACGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
CDS-3UTR CCA 90 bp AGGCCCCGTGCGGCGCCGGAGAAGCTGCCAGAGAGATGGGCCCAGGACGCGGGACCGCAGGGGATGGACTaGACGCGGTTGAGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: RPRAAPEKLPERWAQDAGPQGMD*TRLSPA
Trigger: AGCTGGACTCAACCGCGTCCAGTCCATCCCCTGCGG...TCCCGCGTCCTGGGCCCATCTCTCTGGCAGCTTCTCCGGCGCCGCACGGGGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR CCA 90 bp CAGCCGGCGTGTCGTCGAAGTGCGGGTCGTGGCGCAGGAACTCGTGGAACAGCGCTCCATCGGGCCCAGTaGGCTGCGCGACCCTCGGGT +
Preference number: 4 (lower is better)
Translates to: QPACRRSAGRGAGTRGTALHRAQ*AARPSG
Trigger: ACCCGAGGGTCGCGCAGCCCACTGGGCCCGATGGAG...CGCTGTTCCACGAGTTCCTGCGCCACGACCCGCACTTCGACGACACGCCGGCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR CCA 90 bp GCCCGCGCCTCACGACGCCCAGCACCCGGCAAGCACCGGAAAGAGCAGTGCACAGTTCGCGTCTCAACGTaGATGGGGCGGCAGCGGGGC +
Preference number: 4 (lower is better)
Translates to: ARASRRPAPGKHRKEQCTVRVST*MGRQRG
Trigger: GCCCCGCTGCCGCCCCATCCACGTTGAGACGCGAAC...TGTGCACTGCTCTTTCCGGTGCTTGCCGGGTGCTGGGCGTCGTGAGGCGCGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR TCA 90 bp CGGGTGAGGAACTGCAGAACGGTACCTGCCCCGGATCCCGGGCCCGCCTCCCCAGCAGGTGCAGGTGCGTaGGCCGGGCATTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: RVRNCRTVPAPDPGPASPAGAGA*AGHSSG
Trigger: ACCTGAAGAATGCCCGGCTCACGCACCTGCACCTGC...TGGGGAGGCGGGCCCGGGATCCGGGGCAGGTACCGTTCTGCAGTTCCTCACCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
CDS-3UTR TCA 90 bp AGGCCCCGTGCGGCGCCGGAGAAGCTGCCAGAGAGATGGGCCCAGGACGCGGGACAGGCGGAGAATTTATaGATGGAGAGCGCGGCGCGG +
Preference number: 4 (lower is better)
Translates to: RPRAAPEKLPERWAQDAGQAENL*MESAAR
Trigger: CCGCGCCGCGCTCTCCATTCATAAATTCTCCGCCTG...TCCCGCGTCCTGGGCCCATCTCTCTGGCAGCTTCTCCGGCGCCGCACGGGGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR TCA 90 bp CGGAGAAGCTGCCAGAGAGATGGGCCCAGGACGCGGGACTTAGGCCGGGCTGTGAGTGGCGCCCGCGGCTaGGTTGTAGGGGTCACCTGG +
Preference number: 4 (lower is better)
Translates to: RRSCQRDGPRTRDLGRAVSGARG*VVGVTW
Trigger: CCAGGTGACCCCTACAACTCAGCCGCGGGCGCCACT...CACAGCCCGGCCTAAGTCCCGCGTCCTGGGCCCATCTCTCTGGCAGCTTCTCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR TCA 90 bp AAGGCCACGGCGTCGCCCGCCCGGGCAATGTACTGGATGAAGTCCTCCTGGGGGGGCGGCGCAGGCGGGTaGGGAACTGCAGAACGGTAC +
Preference number: 4 (lower is better)
Translates to: KATASPARAMYWMKSSWGGGAGG*GTAERY
Trigger: GTACCGTTCTGCAGTTCCTCACCCGCCTGCGCCGCC...CCCCCAGGAGGACTTCATCCAGTACATTGCCCGGGCGGGCGACGCCGTGGCCTT
69% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
CDS-3UTR TCA 90 bp TTGTTCGCGTCTCAACGTGGATGGGGCGGCAGCGGGGCGGGCGCCGTTGACATGCGCCCCGTCCGGGACTaGGGGCGAGTGATCGTTGTC +
Preference number: 4 (lower is better)
Translates to: LFASQRGWGGSGAGAVDMRPVRD*GRVIVV
Trigger: GACAACGATCACTCGCCCTCAGTCCCGGACGGGGCG...CATGTCAACGGCGCCCGCCCCGCTGCCGCCCCATCCACGTTGAGACGCGAACAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp GGTGGCGGCGCGGTTATTGCTCGGAGGCGGCGCGGGCTGCCGCCAGCACACGCCATGGTGGCTGTGGGCTaGATTCTGAACTGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: GGGAVIARRRRGLPPAHAMVAVG*ILNWGG
Trigger: TCCTCCCCAGTTCAGAATGCAGCCCACAGCCACCAT...GGCGTGTGCTGGCGGCAGCCCGCGCCGCCTCCGAGCAATAACCGCGCCGCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp CGGGTGAGGAACTGCAGAACGGTACCTGCCCCGGATCCCGGGCCCGCCTCCCCACGGCGACCCTTGTCCTaGGTCTTGCGGCTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: RVRNCRTVPAPDPGPASPRRPLS*VLRLCS
Trigger: TGAGCAGAGCCGCAAGACGCAGGACAAGGGTCGCCG...TGGGGAGGCGGGCCCGGGATCCGGGGCAGGTACCGTTCTGCAGTTCCTCACCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
CDS-3UTR GCA 90 bp GCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAATTTGGCAATACGAGGGGCTGATCTCTaGGAAGTCAGTGGCGCCCGC +
Preference number: 4 (lower is better)
Translates to: AAGTRRVPCGRGRPNLAIRGADL*EVSGAR
Trigger: GCGGGCGCCACTGACTTCGCAGAGATCAGCCCCTCG...TATTGCCAAATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp AAACGGTCTCGGAGGTCGGCAGTCACGGTGTTGAGCCGCCTCCCGGCCCAGGGCCCTCCTCCTGCTCCGTaGTCTCACTGGCTGCCCGCT +
Preference number: 4 (lower is better)
Translates to: KRSRRSAVTVLSRLPAQGPPPAP*SHWLPA
Trigger: AGCGGGCAGCCAGTGAGAGCACGGAGCAGGAGGAGG...GCCCTGGGCCGGGAGGCGGCTCAACACCGTGACTGCCGACCTCCGAGACCGTTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp GGAAAGAGTCTCTCGTCGAGGCCAGCCGCCAGCTTGTCCAGCACCGACCCGGATAGTGGCGGCTGCTGCTaGTCAGGCCCCGCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: GKSLSSRPAASLSSTDPDSGGCC*SGPALP
Trigger: GGGCAGCGCGGGGCCTGAGCAGCAGCAGCCGCCACT...ATCCGGGTCGGTGCTGGACAAGCTGGCGGCTGGCCTCGACGAGAGACTCTTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR GCA 90 bp GGGTCGTGGCGCAGGAACTCGTGGAACAGCGCGTCCGTCTTCTCGTCGATGCTGGGCTCCAGTGGCGGCTaGTGCTGCTCAGGCCCCGCG +
Preference number: 4 (lower is better)
Translates to: GSWRRNSWNSASVFSSMLGSSGG*CCSGPA
Trigger: CGCGGGGCCTGAGCAGCAGCAGCCGCCACTGGAGCC...CAGCATCGACGAGAAGACGGACGCGCTGTTCCACGAGTTCCTGCGCCACGACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR GCA 90 bp GGCCCTCCAGCCTTGGTGCTCCTGGTACCGGCATCCAACGAGGTGCCTTCCCCAGGTCGTTGCCGCTGCTaGTGTGGTCCGAGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: GPPALVLLVPASNEVPSPGRCRC*CGPRRP
Trigger: CGGCCGCCTCGGACCACAGCAGCAGCGGCAACGACC...TGGGGAAGGCACCTCGTTGGATGCCGGTACCAGGAGCACCAAGGCTGGAGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648750.1
CDS-3UTR GCA 90 bp AAGCGGCCGCCCCGTCCGGGACTGAGGGCGAGTGATCGTTGTCCTCAGGAGCCCCCGTCTTCTCGTCGATaGTGTAGTCGCGGCGCGGGC +
Preference number: 4 (lower is better)
Translates to: KRPPRPGLRASDRCPQEPPSSRR*CSRGAG
Trigger: GCCCGCGCCGCGACTACAGCATCGACGAGAAGACGG...GGGCTCCTGAGGACAACGATCACTCGCCCTCAGTCCCGGACGGGGCGGCCGCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp GGCGAGGCGCGGCGGAAAGAGTCTCTCGTCGAGGCCAGCCGCCAGCTTGTCCAGGGCGTGTCGTCGAAGTaGGGGTCGTGGCGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: GEARRKESLVEASRQLVQGVSSK*GSWRRN
Trigger: GTTCCTGCGCCACGACCCGCACTTCGACGACACGCC...CTGGACAAGCTGGCGGCTGGCCTCGACGAGAGACTCTTTCCGCCGCGCCTCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR GCA 90 bp TGTCCTCAGGAGCCCGAAGCTGAGAGCCGTTCACGCCCCTTCCTTCCCGCCCAGCCGGGGTCGCTGTGCTaGCGGCCACGCTGCCACTGT +
Preference number: 4 (lower is better)
Translates to: CPQEPEAESRSRPFLPAQPGSLC*RPRCHC
Trigger: ACAGTGGCAGCGTGGCCGGCAGCACAGCGACCCCGG...CTGGGCGGGAAGGAAGGGGCGTGAACGGCTCTCAGCTTCGGGCTCCTGAGGACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp GGCTCCACAGGTCGCGGTAGCTGGTCTGGGCCTGCTCGGGGCCCGCGTCCCGCTCTTCTGAGAGGAGTCTaGCCAGCCTTGGGAGCATGG +
Preference number: 4 (lower is better)
Translates to: GSTGRGSWSGPARGPRPALLRGV*PALGAW
Trigger: CCATGCTCCCAAGGCTGGGCAGACTCCTCTCAGAAG...AGCGGGACGCGGGCCCCGAGCAGGCCCAGACCAGCTACCGCGACCTGTGGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR GCA 90 bp TGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAATTTGTCCAGCTCAGCCCCTaGTCCAGGCTAGGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: CRRGGDSEGAVRARPPKFVQLSP*SRLGLS
Trigger: AGAGAGCCCTAGCCTGGAGCAGGGGCTGAGCTGGAC...AAATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR GCA 90 bp TGCTTCTCTCCGGGAGTCACGTTTTCCCAGCCTCCCAGTGGACGTGGGAGCCGCCGGCCGCCTCTAGCCTaGAAGCCAGGCCGCGCCGTC +
Preference number: 4 (lower is better)
Translates to: CFSPGVTFSQPPSGRGSRRPPLA*KPGRAV
Trigger: GACGGCGCGGCCTGGCTTGCAGGCTAGAGGCGGCCG...GCGGCTCCCACGTCCACTGGGAGGCTGGGAAAACGTGACTCCCGGAGAGAAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR GCA 90 bp CCCCATTCCCATCCCACCGACGTGGGCCCTGGGCTTCAGGGAAGTTGCCCTTGGTGGCGGCGCGGTTATTaGTCGGAGGCGGCGCGGGCT +
Preference number: 4 (lower is better)
Translates to: PHSHPTDVGPGLQGSCPWWRRGY*SEAARA
Trigger: AGCCCGCGCCGCCTCCGAGCAATAACCGCGCCGCCA...CCAAGGGCAACTTCCCTGAAGCCCAGGGCCCACGTCGGTGGGATGGGAATGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR CCA 90 bp GCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAATTTGTCGTCAGGGCTACTGTaGCAGTGGTGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: ADAAGTRRVPCGRGRPNLSSGLL*QWWWWW
Trigger: CCACCACCACCACCACTGCCACAGTAGCCCTGACGA...CAAATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp GCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAATTTGGCAATACCGTGGGGCGTCCAGTaGCATTGTCCCACGACGTCG +
Preference number: 4 (lower is better)
Translates to: AAGTRRVPCGRGRPNLAIPWGVQ*HCPTTS
Trigger: CGACGTCGTGGGACAATGCCACTGGACGCCCCACGG...TATTGCCAAATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp AAGAGCAGTGCACACTTCGGCGGCGCGAGGGCGGCCGGGGCTCTGCGCCTGCGCCCAGGTAGGTGGTGGTaGTCTTCTCCGCTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: KSSAHFGGARAAGALRLRPGRWW*SSPLPP
Trigger: TGGAGGAAGCGGAGAAGACCACCACCACCTACCTGG...GCGCAGGCGCAGAGCCCCGGCCGCCCTCGCGCCGCCGAAGTGTGCACTGCTCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp GAGCCGCCTCCCGGCCCAGGGCGGCGAACTCGTCTGCGACCGTTAGCGCCCCGCTGTCCAGGTAGGTGGTaGTGGTCTTCTCCGCTTCCT +
Preference number: 4 (lower is better)
Translates to: EPPPGPGRRTRLRPLAPRCPGRW*WSSPLP
Trigger: AGGAAGCGGAGAAGACCACCACCACCTACCTGGACA...GCGGGGCGCTAACGGTCGCAGACGAGTTCGCCGCCCTGGGCCGGGAGGCGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp ACAGCGCGTCCGTCTTCTCGTCGATGCTGTAGTCGCGGCGCGGGCGGCGGGGCCCGGGCATTCTTCAGGTaGTGGAAGTCCCCCTCCGTC +
Preference number: 4 (lower is better)
Translates to: TARPSSRRCCSRGAGGGARAFFR*WKSPSV
Trigger: GACGGAGGGGGACTTCCACCACCTGAAGAATGCCCG...GGCCCCGCCGCCCGCGCCGCGACTACAGCATCGACGAGAAGACGGACGCGCTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR CCA 90 bp GCTCAAGCGAGGCGCGCAGGCTCCACAGGTCGCGGTAGCTGGTCTGGGCCTGCTCGGGCCCTCCAGCCTTaGTGCTCCTGGTACCGGCAT +
Preference number: 4 (lower is better)
Translates to: AQARRAGSTGRGSWSGPARALQP*CSWYRH
Trigger: ATGCCGGTACCAGGAGCACCAAGGCTGGAGGGCCCG...AGCAGGCCCAGACCAGCTACCGCGACCTGTGGAGCCTGCGCGCCTCGCTTGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000591127.1
ENST00000648750.1
CDS-3UTR CCA 90 bp GCCCAGCACCCGGCAAGCACCGGAAAGAGCAGTGCACACTTCGGCGGCGCGAGGCGGGCCCTCCAGCCTTaGTGCTCCTGGTACCGGCAT +
Preference number: 4 (lower is better)
Translates to: AQHPASTGKSSAHFGGARRALQP*CSWYRH
Trigger: ATGCCGGTACCAGGAGCACCAAGGCTGGAGGGCCCG...CCTCGCGCCGCCGAAGTGTGCACTGCTCTTTCCGGTGCTTGCCGGGTGCTGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp TGCGGGAAGGCCACGGCGTCGCCCGCCCGGGCAATGTACTGGATGAAGTCCTCCGCTCCGTGCTCTCACTaGCTGCCCGCTGCCGCTGGA +
Preference number: 4 (lower is better)
Translates to: CGKATASPARAMYWMKSSAPCSH*LPAAAG
Trigger: TCCAGCGGCAGCGGGCAGCCAGTGAGAGCACGGAGC...GGAGGACTTCATCCAGTACATTGCCCGGGCGGGCGACGCCGTGGCCTTCCCGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
CDS-3UTR CCA 90 bp GCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAATTTGGCCCGGGCAATGTACTaGATGAAGTCCTCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: ADAAGTRRVPCGRGRPNLARAMY*MKSSWG
Trigger: CCCCCAGGAGGACTTCATCCAGTACATTGCCCGGGC...CAAATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp CCGCATGCAGCTCAAGCGAGGCGCGCAGGCTCCACAGGTCGCGGTAGCTGGTCTGCCTCCCAGTGGACGTaGGAGCCGCAGGGGATGGAC +
Preference number: 4 (lower is better)
Translates to: PHAAQARRAGSTGRGSWSASQWT*EPQGMD
Trigger: GTCCATCCCCTGCGGCTCCCACGTCCACTGGGAGGC...AGACCAGCTACCGCGACCTGTGGAGCCTGCGCGCCTCGCTTGAGCTGCATGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR CCA 90 bp CGGAAAGAGTCTCTCGTCGAGGCCAGCCGCCAGCTTGTCCAGCACCGACCCGGAACATGCGGAGGGCAGTaGGGACTCGGGGCGCGGGAG +
Preference number: 4 (lower is better)
Translates to: RKESLVEASRQLVQHRPGTCGGQ*GLGARE
Trigger: CTCCCGCGCCCCGAGTCCCCACTGCCCTCCGCATGT...TCCGGGTCGGTGCTGGACAAGCTGGCGGCTGGCCTCGACGAGAGACTCTTTCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR CCA 90 bp TGTCCTCAGGAGCCCGAAGCTGAGAGCCGTTCACGCCCCTTCCTTCCCGCCCAGACATGCGGAGGGCAGTaGGGACTCGGGGCGCGGGAG +
Preference number: 4 (lower is better)
Translates to: CPQEPEAESRSRPFLPAQTCGGQ*GLGARE
Trigger: CTCCCGCGCCCCGAGTCCCCACTGCCCTCCGCATGT...CTGGGCGGGAAGGAAGGGGCGTGAACGGCTCTCAGCTTCGGGCTCCTGAGGACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp GAGCCGCCTCCCGGCCCAGGGCGGCGAACTCGTCTGCGACCGTTAGCGCCCCGCTGGGAAGCTTGGACCTaGCCGTCTGGGTTTTGTTCG +
Preference number: 4 (lower is better)
Translates to: EPPPGPGRRTRLRPLAPRWEAWT*PSGFCS
Trigger: CGAACAAAACCCAGACGGCCAGGTCCAAGCTTCCCA...GCGGGGCGCTAACGGTCGCAGACGAGTTCGCCGCCCTGGGCCGGGAGGCGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp GGCGCGCAGGCTCCACAGGTCGCGGTAGCTGGTCTGGGCCTGCTCGGGGCCCGCTGGGAAGCTTGGACCTaGCCGTCTGGGTTTTGTTCG +
Preference number: 4 (lower is better)
Translates to: GAQAPQVAVAGLGLLGARWEAWT*PSGFCS
Trigger: CGAACAAAACCCAGACGGCCAGGTCCAAGCTTCCCA...GCGGGCCCCGAGCAGGCCCAGACCAGCTACCGCGACCTGTGGAGCCTGCGCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR CCA 90 bp GCCATCGCGGGATGGTGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGTGGGAAGCTTGGACCTaGCCGTCTGGGTTTTGTTCG +
Preference number: 4 (lower is better)
Translates to: AIAGWCRRGGDSEGAVRAWEAWT*PSGFCS
Trigger: CGAACAAAACCCAGACGGCCAGGTCCAAGCTTCCCA...CGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCACCATCCCGCGATGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp CGAACTCGTCTGCGACCGTTAGCGCCCCGCGGCCCCCGCCCGGGCGAGCTCGCGAAAGCTTGGGAAGCTTaGACCTGGCCGTCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: RTRLRPLAPRGPRPGELAKAWEA*TWPSGF
Trigger: AAACCCAGACGGCCAGGTCCAAGCTTCCCAAGCTTT...CGCGAGCTCGCCCGGGCGGGGGCCGCGGGGCGCTAACGGTCGCAGACGAGTTCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR TCA 90 bp CCCTCCAGCCTTGGTGCTCCTGGTACCGGCATCCAACGAGGTGCCTTCCCCAGACCGGCTCCTCCTCGATaGCGGGGATGGCGGGGTCGT +
Preference number: 4 (lower is better)
Translates to: PSSLGAPGTGIQRGAFPRPAPPR*RGWRGR
Trigger: ACGACCCCGCCATCCCCGTCATCGAGGAGGAGCCGG...TCTGGGGAAGGCACCTCGTTGGATGCCGGTACCAGGAGCACCAAGGCTGGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648750.1
CDS-3UTR TCA 90 bp AAAACACGAGAAACGCCATCGCGGGATGGTGCAGACGCGGCGGGGACTCGGAGGCCGGCTCCTCCTCGATaGCGGGGATGGCGGGGTCGT +
Preference number: 4 (lower is better)
Translates to: KTRETPSRDGADAAGTRRPAPPR*RGWRGR
Trigger: ACGACCCCGCCATCCCCGTCATCGAGGAGGAGCCGG...CCTCCGAGTCCCCGCCGCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGTTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR TCA 90 bp GCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAATTTGGCAATATCAGGAGCCCGAAGCTaGGAGCCGTTCACGCCCCTT +
Preference number: 4 (lower is better)
Translates to: AAGTRRVPCGRGRPNLAISGARS*EPFTPL
Trigger: AAGGGGCGTGAACGGCTCTCAGCTTCGGGCTCCTGA...TATTGCCAAATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR TCA 90 bp AAACGGTCTCGGAGGTCGGCAGTCACGGTGTTGAGCCGCCTCCCGGCCCAGGGCCAGCACACGCCGCAGTaGGGTAAACGGTCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: KRSRRSAVTVLSRLPAQGQHTPQ*GKRSRR
Trigger: CCTCCGAGACCGTTTACCTCACTGCGGCGTGTGCTG...GCCCTGGGCCGGGAGGCGGCTCAACACCGTGACTGCCGACCTCCGAGACCGTTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp CGGCGCGGTTATTGCTCGGAGGCGGCGCGGGCTGCCGCCAGCACACGCCGCAGTATGGTGGCTGTGGGCTaGATTCTGAACTGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: RRGYCSEAARAAASTRRSMVAVG*ILNWGG
Trigger: TCCTCCCCAGTTCAGAATGCAGCCCACAGCCACCAT...ACTGCGGCGTGTGCTGGCGGCAGCCCGCGCCGCCTCCGAGCAATAACCGCGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp ACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAATTTGGCAAACAACACCACCAGCGTaGCCCCCACGAACAGCGACA +
Preference number: 4 (lower is better)
Translates to: TRRGLGGCRAGEAAQIWQTTPPA*PPRTAT
Trigger: TGTCGCTGTTCGTGGGGGGCACGCTGGTGGTGTTGT...TTGCCAAATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp CGGGTGAGGAACTGCAGAACGGTACCTGCCCCGGATCCCGGGCCCGCCTCCCCATGCGTCTTGCGGCTCTaGTCAAACAGCGCCGCCTCA +
Preference number: 4 (lower is better)
Translates to: RVRNCRTVPAPDPGPASPCVLRL*SNSAAS
Trigger: TGAGGCGGCGCTGTTTGAGCAGAGCCGCAAGACGCA...TGGGGAGGCGGGCCCGGGATCCGGGGCAGGTACCGTTCTGCAGTTCCTCACCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
CDS-3UTR GCA 90 bp CCCGGGCCCTCCAGCCTTGGTGCTCCTGGTACCGGCATCCAACGAGGTGCCTTCGGCGGCAGGTGCAGGTaGGTGAGCCGGGCATTCTTC +
Preference number: 4 (lower is better)
Translates to: PGPSSLGAPGTGIQRGAFGGRCR*VSRAFF
Trigger: GAAGAATGCCCGGCTCACGCACCTGCACCTGCCGCC...GAAGGCACCTCGTTGGATGCCGGTACCAGGAGCACCAAGGCTGGAGGGCCCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
CDS-3UTR GCA 90 bp CCCCGGGCCCTCCAGCCTTGGTGCTCCTGGTACCGGCATCCAACGAGGTGCCTTCGAGGGGCTGATCTCTaGGAAGTCAGTGGCGCCCGC +
Preference number: 4 (lower is better)
Translates to: PRALQPWCSWYRHPTRCLRGADL*EVSGAR
Trigger: GCGGGCGCCACTGACTTCGCAGAGATCAGCCCCTCG...AAGGCACCTCGTTGGATGCCGGTACCAGGAGCACCAAGGCTGGAGGGCCCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
CDS-3UTR GCA 90 bp AAGCGGCCGCCCCGTCCGGGACTGAGGGCGAGTGATCGTTGTCCTCAGGAGCCCGCCCTCCAGCCTTGGTaGTCCTGGTACCGGCATCCA +
Preference number: 4 (lower is better)
Translates to: KRPPRPGLRASDRCPQEPALQPW*SWYRHP
Trigger: TGGATGCCGGTACCAGGAGCACCAAGGCTGGAGGGC...GGGCTCCTGAGGACAACGATCACTCGCCCTCAGTCCCGGACGGGGCGGCCGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp AAAACACGAGAAACGCCATCGCGGGATGGTGCAGACGCGGCGGGGACTCGGAGGCTGCAGAACGGTACCTaGCCCGGATCCCGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: KTRETPSRDGADAAGTRRLQNGT*PGSRAR
Trigger: GCGGGCCCGGGATCCGGGGCAGGTACCGTTCTGCAG...CCTCCGAGTCCCCGCCGCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGTTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp GCCCAGCACCCGGCAAGCACCGGAAAGAGCAGTGCACACTTCGGCGGCGCGAGGTGCCGCTGGAAGTGGTaGCGCTTGGGGGAACCTCTC +
Preference number: 4 (lower is better)
Translates to: AQHPASTGKSSAHFGGARCRWKW*RLGEPL
Trigger: GAGAGGTTCCCCCAAGCGGCACCACTTCCAGCGGCA...CCTCGCGCCGCCGAAGTGTGCACTGCTCTTTCCGGTGCTTGCCGGGTGCTGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp AGAGTCGCTAGATGCCGAGGGGCTGATCTCTGCGAAGTCAGTGGCGCCCGCGGCTCACTGGCTGCCCGCTaGCGCTGGAAGTGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: RVARCRGADLCEVSGARGSLAAR*RWKWCR
Trigger: GCGGCACCACTTCCAGCGGCAGCGGGCAGCCAGTGA...GCCGCGGGCGCCACTGACTTCGCAGAGATCAGCCCCTCGGCATCTAGCGACTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
CDS-3UTR GCA 90 bp GCGACTAAGCGGCCGCCCCGTCCGGGACTGAGGGCGAGTGATCGTTGTCCTCAGCGTGCTCTCACTGGCTaGCCGCTGCCGCTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: ATKRPPRPGLRASDRCPQRALTG*PLPLEV
Trigger: CACTTCCAGCGGCAGCGGGCAGCCAGTGAGAGCACG...CTGAGGACAACGATCACTCGCCCTCAGTCCCGGACGGGGCGGCCGCTTAGTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp CCGCATGCAGCTCAAGCGAGGCGCGCAGGCTCCACAGGTCGCGGTAGCTGGTCTCCTCCTCCTGCTCCGTaGTCTCACTGGCTGCCCGCT +
Preference number: 4 (lower is better)
Translates to: PHAAQARRAGSTGRGSWSPPPAP*SHWLPA
Trigger: AGCGGGCAGCCAGTGAGAGCACGGAGCAGGAGGAGG...AGACCAGCTACCGCGACCTGTGGAGCCTGCGCGCCTCGCTTGAGCTGCATGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000591127.1
ENST00000648750.1
CDS-3UTR GCA 90 bp CTTGGACCTGGCCGTCTGGGTTTTGTTCGCGTCTCAACGTGGATGGGGCGGCAGAGTGGCGGCTGCTGCTaGTCAGGCCCCGCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: LGPGRLGFVRVSTWMGRQSGGCC*SGPALP
Trigger: GGGCAGCGCGGGGCCTGAGCAGCAGCAGCCGCCACT...CTGCCGCCCCATCCACGTTGAGACGCGAACAAAACCCAGACGGCCAGGTCCAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp TGCTTCTCTCCGGGAGTCACGTTTTCCCAGCCTCCCAGTGGACGTGGGAGCCGCCTCGGTGTCGTCGCCTaGGCCGCGGCCCTCGATGCT +
Preference number: 4 (lower is better)
Translates to: CFSPGVTFSQPPSGRGSRLGVVA*AAALDA
Trigger: AGCATCGAGGGCCGCGGCGCAGGCGACGACACCGAG...GCGGCTCCCACGTCCACTGGGAGGCTGGGAAAACGTGACTCCCGGAGAGAAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR GCA 90 bp CGGAGAAGCTGCCAGAGAGATGGGCCCAGGACGCGGGACTTAGGCCGGGCTGTGGGCGTGTCGTCGAAGTaGGGGTCGTGGCGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: RRSCQRDGPRTRDLGRAVGVSSK*GSWRRN
Trigger: GTTCCTGCGCCACGACCCGCACTTCGACGACACGCC...CACAGCCCGGCCTAAGTCCCGCGTCCTGGGCCCATCTCTCTGGCAGCTTCTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR GCA 90 bp AAGCGGCCGCCCCGTCCGGGACTGAGGGCGAGTGATCGTTGTCCTCAGGAGCCCCACCGGAAAGAGCAGTaGACACTTCGGCGGCGCGAG +
Preference number: 4 (lower is better)
Translates to: KRPPRPGLRASDRCPQEPHRKEQ*TLRRRE
Trigger: CTCGCGCCGCCGAAGTGTGCACTGCTCTTTCCGGTG...GGGCTCCTGAGGACAACGATCACTCGCCCTCAGTCCCGGACGGGGCGGCCGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp CCCTCCAGCCTTGGTGCTCCTGGTACCGGCATCCAACGAGGTGCCTTCCCCAGAGCCATCGCGGGATGGTaGAGACGCGGCGGGGACTCG +
Preference number: 4 (lower is better)
Translates to: PSSLGAPGTGIQRGAFPRAIAGW*RRGGDS
Trigger: CGAGTCCCCGCCGCGTCTGCACCATCCCGCGATGGC...TCTGGGGAAGGCACCTCGTTGGATGCCGGTACCAGGAGCACCAAGGCTGGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648750.1
CDS-3UTR CCA 90 bp AAGCGGCCGCCCCGTCCGGGACTGAGGGCGAGTGATCGTTGTCCTCAGGAGCCCCTGTTGAGGCGCTGGTaGACGTCCCAGCAGCGCTTG +
Preference number: 4 (lower is better)
Translates to: KRPPRPGLRASDRCPQEPLLRRW*TSQQRL
Trigger: CAAGCGCTGCTGGGACGTCCACCAGCGCCTCAACAG...GGGCTCCTGAGGACAACGATCACTCGCCCTCAGTCCCGGACGGGGCGGCCGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp AAACGGTCTCGGAGGTCGGCAGTCACGGTGTTGAGCCGCCTCCCGGCCCAGGGCCTGTTGAGGCGCTGGTaGACGTCCCAGCAGCGCTTG +
Preference number: 4 (lower is better)
Translates to: KRSRRSAVTVLSRLPAQGLLRRW*TSQQRL
Trigger: CAAGCGCTGCTGGGACGTCCACCAGCGCCTCAACAG...GCCCTGGGCCGGGAGGCGGCTCAACACCGTGACTGCCGACCTCCGAGACCGTTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp TGTCCTCAGGAGCCCGAAGCTGAGAGCCGTTCACGCCCCTTCCTTCCCGCCCAGGGCGGCCCGTGGAGCTaGTGGACAGGAAGCGTTCGG +
Preference number: 4 (lower is better)
Translates to: CPQEPEAESRSRPFLPAQGGPWS*WTGSVR
Trigger: CCGAACGCTTCCTGTCCACCAGCTCCACGGGCCGCC...CTGGGCGGGAAGGAAGGGGCGTGAACGGCTCTCAGCTTCGGGCTCCTGAGGACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp GGCGAGGCGCGGCGGAAAGAGTCTCTCGTCGAGGCCAGCCGCCAGCTTGTCCAGGCGTGGTGGCTGAGCTaGCCTCGCCTGAGTCACACT +
Preference number: 4 (lower is better)
Translates to: GEARRKESLVEASRQLVQAWWLS*PRLSHT
Trigger: AGTGTGACTCAGGCGAGGCCAGCTCAGCCACCACGC...CTGGACAAGCTGGCGGCTGGCCTCGACGAGAGACTCTTTCCGCCGCGCCTCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR CCA 90 bp CCCCATTCCCATCCCACCGACGTGGGCCCTGGGCTTCAGGGAAGTTGCCCTTGGTGGCCAGAGTGGCCTTaGGAGAGGTGGCCGGGTGGG +
Preference number: 4 (lower is better)
Translates to: PHSHPTDVGPGLQGSCPWWPEWP*ERWPGG
Trigger: CCCACCCGGCCACCTCTCCCAAGGCCACTCTGGCCA...CCAAGGGCAACTTCCCTGAAGCCCAGGGCCCACGTCGGTGGGATGGGAATGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR CCA 90 bp TTGTTCGCGTCTCAACGTGGATGGGGCGGCAGCGGGGCGGGCGCCGTTGACATGCGGGCCCTCCAGCCTTaGTGCTCCTGGTACCGGCAT +
Preference number: 4 (lower is better)
Translates to: LFASQRGWGGSGAGAVDMRALQP*CSWYRH
Trigger: ATGCCGGTACCAGGAGCACCAAGGCTGGAGGGCCCG...CATGTCAACGGCGCCCGCCCCGCTGCCGCCCCATCCACGTTGAGACGCGAACAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp CTGGCATGGCGGCGCAGGCGGGTGAGGAACTGCAGAACGGTACCTGCCCCGGATCTCTCGTGTCCAGACTaGCTGCCCGCTGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: LAWRRRRVRNCRTVPAPDLSCPD*LPAGWA
Trigger: AGCCCAGCCAGCGGGCAGCCAGTCTGGACACGAGAG...ATCCGGGGCAGGTACCGTTCTGCAGTTCCTCACCCGCCTGCGCCGCCATGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
CDS-3UTR CCA 90 bp CACGACGCCCAGCACCCGGCAAGCACCGGAAAGAGCAGTGCACACTTCGGCGGCCTCTCGTGTCCAGACTaGCTGCCCGCTGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: HDAQHPASTGKSSAHFGGLSCPD*LPAGWA
Trigger: AGCCCAGCCAGCGGGCAGCCAGTCTGGACACGAGAG...GCCGCCGAAGTGTGCACTGCTCTTTCCGGTGCTTGCCGGGTGCTGGGCGTCGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp TGTCCTCAGGAGCCCGAAGCTGAGAGCCGTTCACGCCCCTTCCTTCCCGCCCAGGCTCCGTGCTCTCACTaGCTGCCCGCTGCCGCTGGA +
Preference number: 4 (lower is better)
Translates to: CPQEPEAESRSRPFLPAQAPCSH*LPAAAG
Trigger: TCCAGCGGCAGCGGGCAGCCAGTGAGAGCACGGAGC...CTGGGCGGGAAGGAAGGGGCGTGAACGGCTCTCAGCTTCGGGCTCCTGAGGACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp GCCCGCGCCTCACGACGCCCAGCACCCGGCAAGCACCGGAAAGAGCAGTGCACATGGATGAAGTCCTCCTaGGGGGCATCCCCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: ARASRRPAPGKHRKEQCTWMKSS*GASPSS
Trigger: GGAGGAGGGGGATGCCCCCCAGGAGGACTTCATCCA...TGTGCACTGCTCTTTCCGGTGCTTGCCGGGTGCTGGGCGTCGTGAGGCGCGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp AAAACACGAGAAACGCCATCGCGGGATGGTGCAGACGCGGCGGGGACTCGGAGGGAGGGGCCTTGCCGCTaGAGGCAGGCGAGCGCGTGT +
Preference number: 4 (lower is better)
Translates to: KTRETPSRDGADAAGTRREGPCR*RQASAC
Trigger: ACACGCGCTCGCCTGCCTCCAGCGGCAAGGCCCCTC...CCTCCGAGTCCCCGCCGCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGTTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR CCA 90 bp GGATGGTGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCATTGACCCTGAGCTGTaGCGCCTGCTTATTAAGCAG +
Preference number: 4 (lower is better)
Translates to: GWCRRGGDSEGAVRARPPIDPEL*RLLIKQ
Trigger: CTGCTTAATAAGCAGGCGCCACAGCTCAGGGTCAAT...GGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCACCATCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR CCA 90 bp AAAACACGAGAAACGCCATCGCGGGATGGTGCAGACGCGGCGGGGACTCGGAGGTGCGCGACCCTCGGGTaGCGGGCCCTGCGACTAAGC +
Preference number: 4 (lower is better)
Translates to: KTRETPSRDGADAAGTRRCATLG*RALRLS
Trigger: GCTTAGTCGCAGGGCCCGCCACCCGAGGGTCGCGCA...CCTCCGAGTCCCCGCCGCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGTTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp CTCCCGCCGCCGAGGCCCCGTGCGGCGCCGGAGAAGCTGCCAGAGAGATGGGCCAAAGCTTGGGAAGCTTaGACCTGGCCGTCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: LPPPRPRAAPEKLPERWAKAWEA*TWPSGF
Trigger: AAACCCAGACGGCCAGGTCCAAGCTTCCCAAGCTTT...GGCCCATCTCTCTGGCAGCTTCTCCGGCGCCGCACGGGGCCTCGGCGGCGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp CCCATCCAGGCTGGCATGGCGGCGCAGGCGGGTGAGGAACTGCAGAACGGTACCCTGGCAGGGCGGAGCTaGAAGATGGCCAGAGTGGCC +
Preference number: 4 (lower is better)
Translates to: PIQAGMAAQAGEELQNGTLAGRS*KMARVA
Trigger: GGCCACTCTGGCCATCTTCCAGCTCCGCCCTGCCAG...GGTACCGTTCTGCAGTTCCTCACCCGCCTGCGCCGCCATGCCAGCCTGGATGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591127.1
3UTR CAA 72 bp TGGACGTGGGAGCCGCAGGGGATGGACTGGACGCGGTaGAGTCCAGCTCAGCCCCTGCTCCAGGCTAGGGCT +
Preference number: 4 (lower is better)
Translates to: WTWEPQGMDWTR*SPAQPLLQARA
Trigger: AGCCCTAGCCTGGAGCAGGGGCTGAGCTGGACTCAACCGCGTCCAGTCCATCCCCTGCGGCTCCCACGTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR TCA 90 bp CAGCCGGCGTGTCGTCGAAGTGCGGGTCGTGGCGCAGGAACTCGTGGAACAGCGCTGTGGGCTGCATTCTaGACTGGGGAGGAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: QPACRRSAGRGAGTRGTALWAAF*TGEEGP
Trigger: AGGGCCCTCCTCCCCAGTTCAGAATGCAGCCCACAG...CGCTGTTCCACGAGTTCCTGCGCCACGACCCGCACTTCGACGACACGCCGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR TCA 90 bp TTGTTCGCGTCTCAACGTGGATGGGGCGGCAGCGGGGCGGGCGCCGTTGACATGCTGTGGGCTGCATTCTaGACTGGGGAGGAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: LFASQRGWGGSGAGAVDMLWAAF*TGEEGP
Trigger: AGGGCCCTCCTCCCCAGTTCAGAATGCAGCCCACAG...CATGTCAACGGCGCCCGCCCCGCTGCCGCCCCATCCACGTTGAGACGCGAACAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR TCA 90 bp TTGTTCGCGTCTCAACGTGGATGGGGCGGCAGCGGGGCGGGCGCCGTTGACATGGCAGGTGCAGGTGCGTaGGCCGGGCATTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: LFASQRGWGGSGAGAVDMAGAGA*AGHSSG
Trigger: ACCTGAAGAATGCCCGGCTCACGCACCTGCACCTGC...CATGTCAACGGCGCCCGCCCCGCTGCCGCCCCATCCACGTTGAGACGCGAACAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR TCA 90 bp AGTGGGCTGCGCGACCCTCGGGTGGCGGGCCCTGCGACTAAGCGGCCGCCCCGTAGCACCTCCATCTACTaGAAAATACCTGCCGAGAGC +
Preference number: 4 (lower is better)
Translates to: SGLRDPRVAGPATKRPPRSTSIY*KIPAES
Trigger: GCTCTCGGCAGGTATTTTTCAGTAGATGGAGGTGCT...ACGGGGCGGCCGCTTAGTCGCAGGGCCCGCCACCCGAGGGTCGCGCAGCCCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR TCA 90 bp GCGACTAAGCGGCCGCCCCGTCCGGGACTGAGGGCGAGTGATCGTTGTCCTCAGGGGACTGAGGGCGAGTaGTCGTTGTCCTCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: ATKRPPRPGLRASDRCPQGTEGE*SLSSGA
Trigger: GGCTCCTGAGGACAACGATCACTCGCCCTCAGTCCC...CTGAGGACAACGATCACTCGCCCTCAGTCCCGGACGGGGCGGCCGCTTAGTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp CCGCGGCCCGCGCCTCACGACGCCCAGCACCCGGCAAGCACCGGAAAGAGCAGTATGGTGGCTGTGGGCTaGATTCTGAACTGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: PRPAPHDAQHPASTGKSSMVAVG*ILNWGG
Trigger: TCCTCCCCAGTTCAGAATGCAGCCCACAGCCACCAT...ACTGCTCTTTCCGGTGCTTGCCGGGTGCTGGGCGTCGTGAGGCGCGGGCCGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp GCCCAGCACCCGGCAAGCACCGGAAAGAGCAGTGCACACTTCGGCGGCGCGAGGACAACACCACCAGCGTaGCCCCCACGAACAGCGACA +
Preference number: 4 (lower is better)
Translates to: AQHPASTGKSSAHFGGARTTPPA*PPRTAT
Trigger: TGTCGCTGTTCGTGGGGGGCACGCTGGTGGTGTTGT...CCTCGCGCCGCCGAAGTGTGCACTGCTCTTTCCGGTGCTTGCCGGGTGCTGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp TGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAATTTCCTTGTCCTGCGTCTTaGGGCTCTGCTCAAACAGCG +
Preference number: 4 (lower is better)
Translates to: CRRGGDSEGAVRARPPKFPCPAS*GSAQTA
Trigger: CGCTGTTTGAGCAGAGCCGCAAGACGCAGGACAAGG...AAATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp GCCCGCGCCTCACGACGCCCAGCACCCGGCAAGCACCGGAAAGAGCAGTGCACACCCAGAGTCGCTAGATaGCGAGGGGCTGATCTCTGC +
Preference number: 4 (lower is better)
Translates to: ARASRRPAPGKHRKEQCTPRVAR*RGADLC
Trigger: GCAGAGATCAGCCCCTCGGCATCTAGCGACTCTGGG...TGTGCACTGCTCTTTCCGGTGCTTGCCGGGTGCTGGGCGTCGTGAGGCGCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp CCCGGGCCCTCCAGCCTTGGTGCTCCTGGTACCGGCATCCAACGAGGTGCCTTCAGGCGGGTGAGGAACTaGAGAACGGTACCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: PGPSSLGAPGTGIQRGAFRRVRN*RTVPAP
Trigger: CGGGGCAGGTACCGTTCTGCAGTTCCTCACCCGCCT...GAAGGCACCTCGTTGGATGCCGGTACCAGGAGCACCAAGGCTGGAGGGCCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
CDS-3UTR GCA 90 bp AAGGCCACGGCGTCGCCCGCCCGGGCAATGTACTGGATGAAGTCCTCCTGGGGGTGCCGCTGGAAGTGGTaGCGCTTGGGGGAACCTCTC +
Preference number: 4 (lower is better)
Translates to: KATASPARAMYWMKSSWGCRWKW*RLGEPL
Trigger: GAGAGGTTCCCCCAAGCGGCACCACTTCCAGCGGCA...CCCCCAGGAGGACTTCATCCAGTACATTGCCCGGGCGGGCGACGCCGTGGCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
CDS-3UTR GCA 90 bp CCCGGGCCCTCCAGCCTTGGTGCTCCTGGTACCGGCATCCAACGAGGTGCCTTCTGCCGCTGGAAGTGGTaGCGCTTGGGGGAACCTCTC +
Preference number: 4 (lower is better)
Translates to: PGPSSLGAPGTGIQRGAFCRWKW*RLGEPL
Trigger: GAGAGGTTCCCCCAAGCGGCACCACTTCCAGCGGCA...GAAGGCACCTCGTTGGATGCCGGTACCAGGAGCACCAAGGCTGGAGGGCCCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
CDS-3UTR GCA 90 bp AAGCTTGGACCTGGCCGTCTGGGTTTTGTTCGCGTCTCAACGTGGATGGGGCGGGGCTCCAGTGGCGGCTaGTGCTGCTCAGGCCCCGCG +
Preference number: 4 (lower is better)
Translates to: KLGPGRLGFVRVSTWMGRGSSGG*CCSGPA
Trigger: CGCGGGGCCTGAGCAGCAGCAGCCGCCACTGGAGCC...CCGCCCCATCCACGTTGAGACGCGAACAAAACCCAGACGGCCAGGTCCAAGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp GCTTGGACCTGGCCGTCTGGGTTTTGTTCGCGTCTCAACGTGGATGGGGCGGCACGCGGTCGTTGCCGCTaGTGCTGTGGTCCGAGGCGG +
Preference number: 4 (lower is better)
Translates to: AWTWPSGFCSRLNVDGAARGRCR*CCGPRR
Trigger: CCGCCTCGGACCACAGCAGCAGCGGCAACGACCGCG...TGCCGCCCCATCCACGTTGAGACGCGAACAAAACCCAGACGGCCAGGTCCAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp AGGCCCCGTGCGGCGCCGGAGAAGCTGCCAGAGAGATGGGCCCAGGACGCGGGATACCCAGTCTCTCCCTaGTTCCCTCCTCTGGTCCAT +
Preference number: 4 (lower is better)
Translates to: RPRAAPEKLPERWAQDAGYPVSP*FPPLVH
Trigger: ATGGACCAGAGGAGGGAAGCAGGGAGAGACTGGGTA...TCCCGCGTCCTGGGCCCATCTCTCTGGCAGCTTCTCCGGCGCCGCACGGGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR GCA 90 bp GGGTCGTGGCGCAGGAACTCGTGGAACAGCGCGTCCGTCTTCTCGTCGATGCTGGGGTTGGGGGAGGGGTaGTGCTGGCCGGAGTGGTCA +
Preference number: 4 (lower is better)
Translates to: GSWRRNSWNSASVFSSMLGLGEG*CWPEWS
Trigger: TGACCACTCCGGCCAGCAGCACCCCTCCCCCAACCC...CAGCATCGACGAGAAGACGGACGCGCTGTTCCACGAGTTCCTGCGCCACGACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR GCA 90 bp CCGCATGCAGCTCAAGCGAGGCGCGCAGGCTCCACAGGTCGCGGTAGCTGGTCTGGGCTTCAGGGAAGTTaGCCTTGGGTTGGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: PHAAQARRAGSTGRGSWSGLQGS*PWVGGG
Trigger: CCCTCCCCCAACCCAAGGGCAACTTCCCTGAAGCCC...AGACCAGCTACCGCGACCTGTGGAGCCTGCGCGCCTCGCTTGAGCTGCATGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR CCA 90 bp AGAGTCGCTAGATGCCGAGGGGCTGATCTCTGCGAAGTCAGTGGCGCCCGCGGCCCGTGGGGCGTCCAGTaGCATTGTCCCACGACGTCG +
Preference number: 4 (lower is better)
Translates to: RVARCRGADLCEVSGARGPWGVQ*HCPTTS
Trigger: CGACGTCGTGGGACAATGCCACTGGACGCCCCACGG...GCCGCGGGCGCCACTGACTTCGCAGAGATCAGCCCCTCGGCATCTAGCGACTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648750.1
CDS-3UTR CCA 90 bp CACGACGCCCAGCACCCGGCAAGCACCGGAAAGAGCAGTGCACACTTCGGCGGCGGTCTGGCTCTGCCGTaGGGCGTCCAGTGGCATTGT +
Preference number: 4 (lower is better)
Translates to: HDAQHPASTGKSSAHFGGGLALP*GVQWHC
Trigger: ACAATGCCACTGGACGCCCCACGGCAGAGCCAGACC...GCCGCCGAAGTGTGCACTGCTCTTTCCGGTGCTTGCCGGGTGCTGGGCGTCGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp AAAACACGAGAAACGCCATCGCGGGATGGTGCAGACGCGGCGGGGACTCGGAGGGTCCAGGATGGGGTCTaGCTCTGCCGTGGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: KTRETPSRDGADAAGTRRVQDGV*LCRGAS
Trigger: GGACGCCCCACGGCAGAGCCAGACCCCATCCTGGAC...CCTCCGAGTCCCCGCCGCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGTTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp CCCTCCAGCCTTGGTGCTCCTGGTACCGGCATCCAACGAGGTGCCTTCCCCAGAGTCCAGGATGGGGTCTaGCTCTGCCGTGGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: PSSLGAPGTGIQRGAFPRVQDGV*LCRGAS
Trigger: GGACGCCCCACGGCAGAGCCAGACCCCATCCTGGAC...TCTGGGGAAGGCACCTCGTTGGATGCCGGTACCAGGAGCACCAAGGCTGGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648750.1
CDS-3UTR CCA 90 bp GCTCAAGCGAGGCGCGCAGGCTCCACAGGTCGCGGTAGCTGGTCTGGGCCTGCTCGTAGTTGTCCAGGATaGGGTCTGGCTCTGCCGTGG +
Preference number: 4 (lower is better)
Translates to: AQARRAGSTGRGSWSGPARSCPG*GLALPW
Trigger: CCACGGCAGAGCCAGACCCCATCCTGGACAACTACG...AGCAGGCCCAGACCAGCTACCGCGACCTGTGGAGCCTGCGCGCCTCGCTTGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR CCA 90 bp GGAAAGAGTCTCTCGTCGAGGCCAGCCGCCAGCTTGTCCAGCACCGACCCGGATAGACCCGGCGGCCCGTaGAGCTGGTGGACAGGAAGC +
Preference number: 4 (lower is better)
Translates to: GKSLSSRPAASLSSTDPDRPGGP*SWWTGS
Trigger: GCTTCCTGTCCACCAGCTCCACGGGCCGCCGGGTCT...ATCCGGGTCGGTGCTGGACAAGCTGGCGGCTGGCCTCGACGAGAGACTCTTTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR CCA 90 bp GCCGCCTCTAGCCTGCCGAGAGCAGGGGGCGGGCTGGCCAGAAAGGGGCGGGGGCCTGAGTCACACTCGTaGATGGTGACAATCTTGAGG +
Preference number: 4 (lower is better)
Translates to: AASSLPRAGGGLARKGRGPESHS*MVTILR
Trigger: CCTCAAGATTGTCACCATCCACGAGTGTGACTCAGG...CCCCCGCCCCTTTCTGGCCAGCCCGCCCCCTGCTCTCGGCAGGCTAGAGGCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000648750.1
CDS-3UTR CCA 90 bp GCTCAAGCGAGGCGCGCAGGCTCCACAGGTCGCGGTAGCTGGTCTGGGCCTGCTTCTCTGCGAAGTCAGTaGCGCCCGCGGCTGAGTTGT +
Preference number: 4 (lower is better)
Translates to: AQARRAGSTGRGSWSGPASLRSQ*RPRLSC
Trigger: ACAACTCAGCCGCGGGCGCCACTGACTTCGCAGAGA...AGCAGGCCCAGACCAGCTACCGCGACCTGTGGAGCCTGCGCGCCTCGCTTGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000591127.1
ENST00000648750.1
CDS-3UTR CCA 90 bp GCCCGCGCCTCACGACGCCCAGCACCCGGCAAGCACCGGAAAGAGCAGTGCACACAGCCTTGGTGCTCCTaGTACCGGCATCCAACGAGG +
Preference number: 4 (lower is better)
Translates to: ARASRRPAPGKHRKEQCTQPWCS*YRHPTR
Trigger: CCTCGTTGGATGCCGGTACCAGGAGCACCAAGGCTG...TGTGCACTGCTCTTTCCGGTGCTTGCCGGGTGCTGGGCGTCGTGAGGCGCGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp TTGTTCGCGTCTCAACGTGGATGGGGCGGCAGCGGGGCGGGCGCCGTTGACATGCGCGGCCCTCGATGCTaGCGTAGCCACTGTCCATCT +
Preference number: 4 (lower is better)
Translates to: LFASQRGWGGSGAGAVDMRGPRC*RSHCPS
Trigger: AGATGGACAGTGGCTACGCCAGCATCGAGGGCCGCG...CATGTCAACGGCGCCCGCCCCGCTGCCGCCCCATCCACGTTGAGACGCGAACAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp GCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAATTTGGCAATATGGCGCAGGAACTCGTaGAACAGCGCGTCCGTCTTC +
Preference number: 4 (lower is better)
Translates to: AAGTRRVPCGRGRPNLAIWRRNS*NSASVF
Trigger: GAAGACGGACGCGCTGTTCCACGAGTTCCTGCGCCA...TATTGCCAAATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp AAGCTTGGACCTGGCCGTCTGGGTTTTGTTCGCGTCTCAACGTGGATGGGGCGGTGTGGTCGGGGGACGTaGGGGCGGCGGCGACCAACG +
Preference number: 4 (lower is better)
Translates to: KLGPGRLGFVRVSTWMGRCGRGT*GRRRPT
Trigger: CGTTGGTCGCCGCCGCCCCCACGTCCCCCGACCACA...CCGCCCCATCCACGTTGAGACGCGAACAAAACCCAGACGGCCAGGTCCAAGCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp AAAACACGAGAAACGCCATCGCGGGATGGTGCAGACGCGGCGGGGACTCGGAGGTTCCCAGCCTCCCAGTaGACGTGGGAGCCGCAGGGG +
Preference number: 4 (lower is better)
Translates to: KTRETPSRDGADAAGTRRFPASQ*TWEPQG
Trigger: CCCCTGCGGCTCCCACGTCCACTGGGAGGCTGGGAA...CCTCCGAGTCCCCGCCGCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGTTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR CCA 90 bp GGGTCGTGGCGCAGGAACTCGTGGAACAGCGCGTCCGTCTTCTCGTCGATGCTGCGGCCATCCCGCCTCTaGATCAGGGAGGGTGGACGC +
Preference number: 4 (lower is better)
Translates to: GSWRRNSWNSASVFSSMLRPSRL*IREGGR
Trigger: GCGTCCACCCTCCCTGATCCAGAGGCGGGATGGCCG...CAGCATCGACGAGAAGACGGACGCGCTGTTCCACGAGTTCCTGCGCCACGACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR CCA 90 bp GAACCCTTCAGGCCTCGGACTCCACCAGCAAGCAGCAGTACCAGCGCCATCCTCCTCCATCGGGCCCAGTaGGCTGCGCGACCCTCGGGT +
Preference number: 4 (lower is better)
Translates to: EPFRPRTPPASSSTSAILLHRAQ*AARPSG
Trigger: ACCCGAGGGTCGCGCAGCCCACTGGGCCCGATGGAG...GAGGATGGCGCTGGTACTGCTGCTTGCTGGTGGAGTCCGAGGCCTGAAGGGTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR CCA 90 bp GGAAAGAGTCTCTCGTCGAGGCCAGCCGCCAGCTTGTCCAGCACCGACCCGGATAACGCCATCGCGGGATaGTGCAGACGCGGCGGGGAC +
Preference number: 4 (lower is better)
Translates to: GKSLSSRPAASLSSTDPDNAIAG*CRRGGD
Trigger: GTCCCCGCCGCGTCTGCACCATCCCGCGATGGCGTT...ATCCGGGTCGGTGCTGGACAAGCTGGCGGCTGGCCTCGACGAGAGACTCTTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR CCA 90 bp GCTCAAGCGAGGCGCGCAGGCTCCACAGGTCGCGGTAGCTGGTCTGGGCCTGCTGTTGTAGGGGTCACCTaGCAGGGCGGAGCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: AQARRAGSTGRGSWSGPAVVGVT*QGGAGR
Trigger: TCTTCCAGCTCCGCCCTGCCAGGTGACCCCTACAAC...AGCAGGCCCAGACCAGCTACCGCGACCTGTGGAGCCTGCGCGCCTCGCTTGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591127.1
CDS-3UTR CCA 90 bp TGTCCTCAGGAGCCCGAAGCTGAGAGCCGTTCACGCCCCTTCCTTCCCGCCCAGCGCCCAGTCTTGGGCTaGGTGGGTGCCGTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: CPQEPEAESRSRPFLPAQRPVLG*VGAVVQ
Trigger: CTGGACAACGGCACCCACCCAGCCCAAGACTGGGCG...CTGGGCGGGAAGGAAGGGGCGTGAACGGCTCTCAGCTTCGGGCTCCTGAGGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648750.1
3UTR CAA 72 bp CGCCTCTGGATCAGGGAGGGTGGACGCGGGTGGGACTaGGGACTCGGGCGGGCCTTGGAAGGTGAGAGCTTT +
Preference number: 4 (lower is better)
Translates to: RLWIREGGRGWD*GLGRALEGESF
Trigger: AAAGCTCTCACCTTCCAAGGCCCGCCCGAGTCCCAAGTCCCACCCGCGTCCACCCTCCCTGATCCAGAGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590083.5
3UTR CAA 72 bp GGCGGAAAGAGTCTCTCGTCGAGGCCAGCCGCCAGCTaGTCCAGCACCGACCCGGATGGTAGGACGCACAGG +
Preference number: 4 (lower is better)
Translates to: GGKSLSSRPAAS*SSTDPDGRTHR
Trigger: CCTGTGCGTCCTACCATCCGGGTCGGTGCTGGACAAGCTGGCGGCTGGCCTCGACGAGAGACTCTTTCCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
3UTR CAA 72 bp TGCGTCTTGCGGCTCTGCTCAAACAGCGCCGCCTCATaGAAGGAGACCCGGCGGCCCGTGGAGCTGGTGGAC +
Preference number: 4 (lower is better)
Translates to: CVLRLCSNSAAS*KETRRPVELVD
Trigger: GTCCACCAGCTCCACGGGCCGCCGGGTCTCCTTCAATGAGGCGGCGCTGTTTGAGCAGAGCCGCAAGACGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648750.1
CDS-3UTR TCA 90 bp CTCCAGCCTTGGTGCTCCTGGTACCGGCATCCAACGAGGTGCCTTCCCCAGAGTAGTGGCGCCCGCGGCTaGGTTGTAGGGGTCACCTGG +
Preference number: 4 (lower is better)
Translates to: LQPWCSWYRHPTRCLPQSSGARG*VVGVTW
Trigger: CCAGGTGACCCCTACAACTCAGCCGCGGGCGCCACT...ACTCTGGGGAAGGCACCTCGTTGGATGCCGGTACCAGGAGCACCAAGGCTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
CDS-3UTR TCA 90 bp AGAGTCGCTAGATGCCGAGGGGCTGATCTCTGCGAAGTCAGTGGCGCCCGCGGCGGGACTGAGGGCGAGTaGTCGTTGTCCTCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: RVARCRGADLCEVSGARGGTEGE*SLSSGA
Trigger: GGCTCCTGAGGACAACGATCACTCGCCCTCAGTCCC...GCCGCGGGCGCCACTGACTTCGCAGAGATCAGCCCCTCGGCATCTAGCGACTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648750.1
CDS-3UTR GCA 90 bp CTGGCATGGCGGCGCAGGCGGGTGAGGAACTGCAGAACGGTACCTGCCCCGGATTGCGTCTTGCGGCTCTaGTCAAACAGCGCCGCCTCA +
Preference number: 4 (lower is better)
Translates to: LAWRRRRVRNCRTVPAPDCVLRL*SNSAAS
Trigger: TGAGGCGGCGCTGTTTGAGCAGAGCCGCAAGACGCA...ATCCGGGGCAGGTACCGTTCTGCAGTTCCTCACCCGCCTGCGCCGCCATGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
CDS-3UTR GCA 90 bp GGTGCCGCTTGGGGGAACCTCTCGTGTCCAGACTGGCTGCCCGCTGGCTGGGCTCCTTGTCCTGCGTCTTaGGGCTCTGCTCAAACAGCG +
Preference number: 4 (lower is better)
Translates to: GAAWGNLSCPDWLPAGWAPCPAS*GSAQTA
Trigger: CGCTGTTTGAGCAGAGCCGCAAGACGCAGGACAAGG...AGCCCAGCCAGCGGGCAGCCAGTCTGGACACGAGAGGTTCCCCCAAGCGGCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
CDS-3UTR GCA 90 bp CGGAGAAGCTGCCAGAGAGATGGGCCCAGGACGCGGGACTTAGGCCGGGCTGTGCCCAGAGTCGCTAGATaGCGAGGGGCTGATCTCTGC +
Preference number: 4 (lower is better)
Translates to: RRSCQRDGPRTRDLGRAVPRVAR*RGADLC
Trigger: GCAGAGATCAGCCCCTCGGCATCTAGCGACTCTGGG...CACAGCCCGGCCTAAGTCCCGCGTCCTGGGCCCATCTCTCTGGCAGCTTCTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR GCA 90 bp CTTGGACCTGGCCGTCTGGGTTTTGTTCGCGTCTCAACGTGGATGGGGCGGCAGCGTGTCCAGACTGGCTaGCCGCTGGCTGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LGPGRLGFVRVSTWMGRQRVQTG*PLAGLQ
Trigger: CTGGAGCCCAGCCAGCGGGCAGCCAGTCTGGACACG...CTGCCGCCCCATCCACGTTGAGACGCGAACAAAACCCAGACGGCCAGGTCCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp GCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAATTTGGCAATACTCTCTGCCCACCCATaGTGGATAACCAGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: AAGTRRVPCGRGRPNLAILSAHP*WITSRR
Trigger: CCTCCTGCTGGTTATCCAGCATGGGTGGGCAGAGAG...TATTGCCAAATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR GCA 90 bp AAGCTTGGACCTGGCCGTCTGGGTTTTGTTCGCGTCTCAACGTGGATGGGGCGGGCCATCGCGGGATGGTaGAGACGCGGCGGGGACTCG +
Preference number: 4 (lower is better)
Translates to: KLGPGRLGFVRVSTWMGRAIAGW*RRGGDS
Trigger: CGAGTCCCCGCCGCGTCTGCACCATCCCGCGATGGC...CCGCCCCATCCACGTTGAGACGCGAACAAAACCCAGACGGCCAGGTCCAAGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp GGAAAGAGTCTCTCGTCGAGGCCAGCCGCCAGCTTGTCCAGCACCGACCCGGATTGGTGGTGGCGGCTGTaGCCATGGTGGCTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: GKSLSSRPAASLSSTDPDWWWRL*PWWLWA
Trigger: AGCCCACAGCCACCATGGCCACAGCCGCCACCACCA...ATCCGGGTCGGTGCTGGACAAGCTGGCGGCTGGCCTCGACGAGAGACTCTTTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR CCA 90 bp CCCATCCAGGCTGGCATGGCGGCGCAGGCGGGTGAGGAACTGCAGAACGGTACCCGGGCATTCTTCAGGTaGTGGAAGTCCCCCTCCGTC +
Preference number: 4 (lower is better)
Translates to: PIQAGMAAQAGEELQNGTRAFFR*WKSPSV
Trigger: GACGGAGGGGGACTTCCACCACCTGAAGAATGCCCG...GGTACCGTTCTGCAGTTCCTCACCCGCCTGCGCCGCCATGCCAGCCTGGATGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
CDS-3UTR CCA 90 bp CGGCGCGGTTATTGCTCGGAGGCGGCGCGGGCTGCCGCCAGCACACGCCGCAGTCCTGAGTCACACTCGTaGATGGTGACAATCTTGAGG +
Preference number: 4 (lower is better)
Translates to: RRGYCSEAARAAASTRRSPESHS*MVTILR
Trigger: CCTCAAGATTGTCACCATCCACGAGTGTGACTCAGG...ACTGCGGCGTGTGCTGGCGGCAGCCCGCGCCGCCTCCGAGCAATAACCGCGCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp CCTTCCCCAGAGTCGCTAGATGCCGAGGGGCTGATCTCTGCGAAGTCAGTGGCGTGGCCAGAGTGGCCTTaGGAGAGGTGGCCGGGTGGG +
Preference number: 4 (lower is better)
Translates to: PSPESLDAEGLISAKSVAWPEWP*ERWPGG
Trigger: CCCACCCGGCCACCTCTCCCAAGGCCACTCTGGCCA...CGCCACTGACTTCGCAGAGATCAGCCCCTCGGCATCTAGCGACTCTGGGGAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
CDS-3UTR CCA 90 bp GCGCGGCGGAAAGAGTCTCTCGTCGAGGCCAGCCGCCAGCTTGTCCAGCACCGACAGCCTTGGTGCTCCTaGTACCGGCATCCAACGAGG +
Preference number: 4 (lower is better)
Translates to: ARRKESLVEASRQLVQHRQPWCS*YRHPTR
Trigger: CCTCGTTGGATGCCGGTACCAGGAGCACCAAGGCTG...TCGGTGCTGGACAAGCTGGCGGCTGGCCTCGACGAGAGACTCTTTCCGCCGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR CCA 90 bp AAGGCCACGGCGTCGCCCGCCCGGGCAATGTACTGGATGAAGTCCTCCTGGGGGGCCCGGGCAATGTACTaGATGAAGTCCTCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: KATASPARAMYWMKSSWGARAMY*MKSSWG
Trigger: CCCCCAGGAGGACTTCATCCAGTACATTGCCCGGGC...CCCCCAGGAGGACTTCATCCAGTACATTGCCCGGGCGGGCGACGCCGTGGCCTT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
CDS-3UTR CCA 90 bp GCGCGGCGGAAAGAGTCTCTCGTCGAGGCCAGCCGCCAGCTTGTCCAGCACCGAGCCCGGGCAATGTACTaGATGAAGTCCTCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: ARRKESLVEASRQLVQHRARAMY*MKSSWG
Trigger: CCCCCAGGAGGACTTCATCCAGTACATTGCCCGGGC...TCGGTGCTGGACAAGCTGGCGGCTGGCCTCGACGAGAGACTCTTTCCGCCGCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR CCA 90 bp CACGACGCCCAGCACCCGGCAAGCACCGGAAAGAGCAGTGCACACTTCGGCGGCTGGCGCAGGAACTCGTaGAACAGCGCGTCCGTCTTC +
Preference number: 4 (lower is better)
Translates to: HDAQHPASTGKSSAHFGGWRRNS*NSASVF
Trigger: GAAGACGGACGCGCTGTTCCACGAGTTCCTGCGCCA...GCCGCCGAAGTGTGCACTGCTCTTTCCGGTGCTTGCCGGGTGCTGGGCGTCGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp TGCTTCTCTCCGGGAGTCACGTTTTCCCAGCCTCCCAGTGGACGTGGGAGCCGCCTGGATCAGGGAGGGTaGACGCGGGTGGGACTTGGG +
Preference number: 4 (lower is better)
Translates to: CFSPGVTFSQPPSGRGSRLDQGG*TRVGLG
Trigger: CCCAAGTCCCACCCGCGTCCACCCTCCCTGATCCAG...GCGGCTCCCACGTCCACTGGGAGGCTGGGAAAACGTGACTCCCGGAGAGAAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR CCA 90 bp GCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAATTTGTTGGACCTGGCCGTCTaGGTTTTGTTCGCGTCTCAA +
Preference number: 4 (lower is better)
Translates to: ADAAGTRRVPCGRGRPNLLDLAV*VLFASQ
Trigger: TTGAGACGCGAACAAAACCCAGACGGCCAGGTCCAA...CAAATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp GGCCCTCCAGCCTTGGTGCTCCTGGTACCGGCATCCAACGAGGTGCCTTCCCCAGGCGGAGCTGGAAGATaGCCAGAGTGGCCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: GPPALVLLVPASNEVPSPGGAGR*PEWPWE
Trigger: CTCCCAAGGCCACTCTGGCCATCTTCCAGCTCCGCC...TGGGGAAGGCACCTCGTTGGATGCCGGTACCAGGAGCACCAAGGCTGGAGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591127.1
3UTR CAA 72 bp GCCTCGCCTGAGTCACACTCGTGGATGGTGACAATCTaGAGGGGCGGCAGGTGCAGGTGCGTGAGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: ASPESHSWMVTI*RGGRCRCVSRA
Trigger: TGCCCGGCTCACGCACCTGCACCTGCCGCCCCTCAAGATTGTCACCATCCACGAGTGTGACTCAGGCGAGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648750.1
CDS-3UTR TCA 90 bp GGAAAGAGTCTCTCGTCGAGGCCAGCCGCCAGCTTGTCCAGCACCGACCCGGATTCAGGAGCCCGAAGCTaGGAGCCGTTCACGCCCCTT +
Preference number: 4 (lower is better)
Translates to: GKSLSSRPAASLSSTDPDSGARS*EPFTPL
Trigger: AAGGGGCGTGAACGGCTCTCAGCTTCGGGCTCCTGA...ATCCGGGTCGGTGCTGGACAAGCTGGCGGCTGGCCTCGACGAGAGACTCTTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR GCA 90 bp CGGAAAGAGTCTCTCGTCGAGGCCAGCCGCCAGCTTGTCCAGCACCGACCCGGATGCGTCTTGCGGCTCTaGTCAAACAGCGCCGCCTCA +
Preference number: 4 (lower is better)
Translates to: RKESLVEASRQLVQHRPGCVLRL*SNSAAS
Trigger: TGAGGCGGCGCTGTTTGAGCAGAGCCGCAAGACGCA...TCCGGGTCGGTGCTGGACAAGCTGGCGGCTGGCCTCGACGAGAGACTCTTTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR GCA 90 bp GAACCCTTCAGGCCTCGGACTCCACCAGCAAGCAGCAGTACCAGCGCCATCCTCGGCGGCAGGTGCAGGTaGGTGAGCCGGGCATTCTTC +
Preference number: 4 (lower is better)
Translates to: EPFRPRTPPASSSTSAILGGRCR*VSRAFF
Trigger: GAAGAATGCCCGGCTCACGCACCTGCACCTGCCGCC...GAGGATGGCGCTGGTACTGCTGCTTGCTGGTGGAGTCCGAGGCCTGAAGGGTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR GCA 90 bp GGCCCTCCAGCCTTGGTGCTCCTGGTACCGGCATCCAACGAGGTGCCTTCCCCACCCAGAGTCGCTAGATaGCGAGGGGCTGATCTCTGC +
Preference number: 4 (lower is better)
Translates to: GPPALVLLVPASNEVPSPPRVAR*RGADLC
Trigger: GCAGAGATCAGCCCCTCGGCATCTAGCGACTCTGGG...TGGGGAAGGCACCTCGTTGGATGCCGGTACCAGGAGCACCAAGGCTGGAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
CDS-3UTR GCA 90 bp GGAAAGAGTCTCTCGTCGAGGCCAGCCGCCAGCTTGTCCAGCACCGACCCGGATGCCCTCCAGCCTTGGTaGTCCTGGTACCGGCATCCA +
Preference number: 4 (lower is better)
Translates to: GKSLSSRPAASLSSTDPDALQPW*SWYRHP
Trigger: TGGATGCCGGTACCAGGAGCACCAAGGCTGGAGGGC...ATCCGGGTCGGTGCTGGACAAGCTGGCGGCTGGCCTCGACGAGAGACTCTTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR GCA 90 bp CTGGCTGGGCTCCAGCTTCCACTTCTTGACCTTGAAATAGGGGCTGGCCCCATCCTGCAGAACGGTACCTaGCCCGGATCCCGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: LAGLQLPLLDLEIGAGPILQNGT*PGSRAR
Trigger: GCGGGCCCGGGATCCGGGGCAGGTACCGTTCTGCAG...GATGGGGCCAGCCCCTATTTCAAGGTCAAGAAGTGGAAGCTGGAGCCCAGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
CDS-3UTR GCA 90 bp AAAACACGAGAAACGCCATCGCGGGATGGTGCAGACGCGGCGGGGACTCGGAGGAGGCGGGTGAGGAACTaGAGAACGGTACCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: KTRETPSRDGADAAGTRRRRVRN*RTVPAP
Trigger: CGGGGCAGGTACCGTTCTGCAGTTCCTCACCCGCCT...CCTCCGAGTCCCCGCCGCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGTTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp AAGCTTGGACCTGGCCGTCTGGGTTTTGTTCGCGTCTCAACGTGGATGGGGCGGCGTGTCCAGACTGGCTaGCCGCTGGCTGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: KLGPGRLGFVRVSTWMGRRVQTG*PLAGLQ
Trigger: CTGGAGCCCAGCCAGCGGGCAGCCAGTCTGGACACG...CCGCCCCATCCACGTTGAGACGCGAACAAAACCCAGACGGCCAGGTCCAAGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp GCTCAAGCGAGGCGCGCAGGCTCCACAGGTCGCGGTAGCTGGTCTGGGCCTGCTCTGAGCTGTGGCGCCTaGTTATTAAGCAGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: AQARRAGSTGRGSWSGPALSCGA*LLSRVP
Trigger: AGGCACCCTGCTTAATAAGCAGGCGCCACAGCTCAG...AGCAGGCCCAGACCAGCTACCGCGACCTGTGGAGCCTGCGCGCCTCGCTTGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR CCA 90 bp AAAACACGAGAAACGCCATCGCGGGATGGTGCAGACGCGGCGGGGACTCGGAGGCTGTTGAGGCGCTGGTaGACGTCCCAGCAGCGCTTG +
Preference number: 4 (lower is better)
Translates to: KTRETPSRDGADAAGTRRLLRRW*TSQQRL
Trigger: CAAGCGCTGCTGGGACGTCCACCAGCGCCTCAACAG...CCTCCGAGTCCCCGCCGCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGTTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp AGGTGCGTGAGCCGGGCATTCTTCAGGTGGTGGAAGTCCCCCTCCGTCAGTGTGTCGGTCTCCGCATCCTaGCACTCGGGGTCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: RCVSRAFFRWWKSPSVSVSVSAS*HSGSSP
Trigger: GGGAGAGGACCCCGAGTGCCAGGATGCGGAGACCGA...CACACTGACGGAGGGGGACTTCCACCACCTGAAGAATGCCCGGCTCACGCACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648750.1
CDS-3UTR CCA 90 bp AAGCTTGGACCTGGCCGTCTGGGTTTTGTTCGCGTCTCAACGTGGATGGGGCGGTGGCCAGAGTGGCCTTaGGAGAGGTGGCCGGGTGGG +
Preference number: 4 (lower is better)
Translates to: KLGPGRLGFVRVSTWMGRWPEWP*ERWPGG
Trigger: CCCACCCGGCCACCTCTCCCAAGGCCACTCTGGCCA...CCGCCCCATCCACGTTGAGACGCGAACAAAACCCAGACGGCCAGGTCCAAGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp TGTCCTCAGGAGCCCGAAGCTGAGAGCCGTTCACGCCCCTTCCTTCCCGCCCAGTCTCTGCGAAGTCAGTaGCGCCCGCGGCTGAGTTGT +
Preference number: 4 (lower is better)
Translates to: CPQEPEAESRSRPFLPAQSLRSQ*RPRLSC
Trigger: ACAACTCAGCCGCGGGCGCCACTGACTTCGCAGAGA...CTGGGCGGGAAGGAAGGGGCGTGAACGGCTCTCAGCTTCGGGCTCCTGAGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp GCTTGGACCTGGCCGTCTGGGTTTTGTTCGCGTCTCAACGTGGATGGGGCGGCACGGGCCCTCCAGCCTTaGTGCTCCTGGTACCGGCAT +
Preference number: 4 (lower is better)
Translates to: AWTWPSGFCSRLNVDGAARALQP*CSWYRH
Trigger: ATGCCGGTACCAGGAGCACCAAGGCTGGAGGGCCCG...TGCCGCCCCATCCACGTTGAGACGCGAACAAAACCCAGACGGCCAGGTCCAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp TGTCCTCAGGAGCCCGAAGCTGAGAGCCGTTCACGCCCCTTCCTTCCCGCCCAGTCGAAGTGCGGGTCGTaGCGCAGGAACTCGTGGAAC +
Preference number: 4 (lower is better)
Translates to: CPQEPEAESRSRPFLPAQSKCGS*RRNSWN
Trigger: GTTCCACGAGTTCCTGCGCCACGACCCGCACTTCGA...CTGGGCGGGAAGGAAGGGGCGTGAACGGCTCTCAGCTTCGGGCTCCTGAGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp CCAGAAAAGAAAAACACGAGAAACGCCATCGCGGGATGGTGCAGACGCGGCGGGGAGGGTGGACGCGGGTaGGACTTGGGACTCGGGCGG +
Preference number: 4 (lower is better)
Translates to: PEKKNTRNAIAGWCRRGGEGGRG*DLGLGR
Trigger: CCGCCCGAGTCCCAAGTCCCACCCGCGTCCACCCTC...CCCGCCGCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGTTTTTCTTTTCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR CCA 90 bp ACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAATTTGGCAAAAAGCTTGGGAAGCTTaGACCTGGCCGTCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: TRRGLGGCRAGEAAQIWQKAWEA*TWPSGF
Trigger: AAACCCAGACGGCCAGGTCCAAGCTTCCCAAGCTTT...TTGCCAAATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR TCA 90 bp GGCTCCACAGGTCGCGGTAGCTGGTCTGGGCCTGCTCGGGGCCCGCGTCCCGCTGTGAGAGCTTTAAAATaGGCCAGTGTGTTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: GSTGRGSWSGPARGPRPAVRALK*ASVFCR
Trigger: CCTGCAAAACACACTGGCTCATTTTAAAGCTCTCAC...AGCGGGACGCGGGCCCCGAGCAGGCCCAGACCAGCTACCGCGACCTGTGGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR GCA 90 bp CTTGGACCTGGCCGTCTGGGTTTTGTTCGCGTCTCAACGTGGATGGGGCGGCAGCGGCGACCCTTGTCCTaGGTCTTGCGGCTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: LGPGRLGFVRVSTWMGRQRRPLS*VLRLCS
Trigger: TGAGCAGAGCCGCAAGACGCAGGACAAGGGTCGCCG...CTGCCGCCCCATCCACGTTGAGACGCGAACAAAACCCAGACGGCCAGGTCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp AAGCTTGGACCTGGCCGTCTGGGTTTTGTTCGCGTCTCAACGTGGATGGGGCGGGGCGGCAGGTGCAGGTaGGTGAGCCGGGCATTCTTC +
Preference number: 4 (lower is better)
Translates to: KLGPGRLGFVRVSTWMGRGGRCR*VSRAFF
Trigger: GAAGAATGCCCGGCTCACGCACCTGCACCTGCCGCC...CCGCCCCATCCACGTTGAGACGCGAACAAAACCCAGACGGCCAGGTCCAAGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp CTCCAGCCTTGGTGCTCCTGGTACCGGCATCCAACGAGGTGCCTTCCCCAGAGTGCCCTCCAGCCTTGGTaGTCCTGGTACCGGCATCCA +
Preference number: 4 (lower is better)
Translates to: LQPWCSWYRHPTRCLPQSALQPW*SWYRHP
Trigger: TGGATGCCGGTACCAGGAGCACCAAGGCTGGAGGGC...ACTCTGGGGAAGGCACCTCGTTGGATGCCGGTACCAGGAGCACCAAGGCTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
CDS-3UTR GCA 90 bp CCAGAAAAGAAAAACACGAGAAACGCCATCGCGGGATGGTGCAGACGCGGCGGGTCACTGGCTGCCCGCTaGCGCTGGAAGTGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: PEKKNTRNAIAGWCRRGGSLAAR*RWKWCR
Trigger: GCGGCACCACTTCCAGCGGCAGCGGGCAGCCAGTGA...CCCGCCGCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGTTTTTCTTTTCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp CCAGAAAAGAAAAACACGAGAAACGCCATCGCGGGATGGTGCAGACGCGGCGGGACTCGGAGGGTGCCGTaGGGGCGAGGCCGCCCAAAT +
Preference number: 4 (lower is better)
Translates to: PEKKNTRNAIAGWCRRGGTRRVP*GRGRPN
Trigger: ATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGT...CCCGCCGCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGTTTTTCTTTTCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp GCTTGGACCTGGCCGTCTGGGTTTTGTTCGCGTCTCAACGTGGATGGGGCGGCAGGCTGCATTCTGAACTaGGGAGGAGGGCCCTCAGCG +
Preference number: 4 (lower is better)
Translates to: AWTWPSGFCSRLNVDGAAGCILN*GGGPSA
Trigger: CGCTGAGGGCCCTCCTCCCCAGTTCAGAATGCAGCC...TGCCGCCCCATCCACGTTGAGACGCGAACAAAACCCAGACGGCCAGGTCCAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp CTTGGACCTGGCCGTCTGGGTTTTGTTCGCGTCTCAACGTGGATGGGGCGGCAGGGCTGCATTCTGAACTaGGGAGGAGGGCCCTCAGCG +
Preference number: 4 (lower is better)
Translates to: LGPGRLGFVRVSTWMGRQGCILN*GGGPSA
Trigger: CGCTGAGGGCCCTCCTCCCCAGTTCAGAATGCAGCC...CTGCCGCCCCATCCACGTTGAGACGCGAACAAAACCCAGACGGCCAGGTCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp CACGACGCCCAGCACCCGGCAAGCACCGGAAAGAGCAGTGCACACTTCGGCGGCGCATTCTTCAGGTGGTaGAAGTCCCCCTCCGTCAGT +
Preference number: 4 (lower is better)
Translates to: HDAQHPASTGKSSAHFGGAFFRW*KSPSVS
Trigger: ACTGACGGAGGGGGACTTCCACCACCTGAAGAATGC...GCCGCCGAAGTGTGCACTGCTCTTTCCGGTGCTTGCCGGGTGCTGGGCGTCGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp TGTCCTCAGGAGCCCGAAGCTGAGAGCCGTTCACGCCCCTTCCTTCCCGCCCAGCGGAGAATTTATGAATaGAGAGCGCGGCGCGGGGGA +
Preference number: 4 (lower is better)
Translates to: CPQEPEAESRSRPFLPAQRRIYE*RARRGG
Trigger: TCCCCCGCGCCGCGCTCTCCATTCATAAATTCTCCG...CTGGGCGGGAAGGAAGGGGCGTGAACGGCTCTCAGCTTCGGGCTCCTGAGGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp GCTTGGACCTGGCCGTCTGGGTTTTGTTCGCGTCTCAACGTGGATGGGGCGGCACGCGGCCCTCGATGCTaGCGTAGCCACTGTCCATCT +
Preference number: 4 (lower is better)
Translates to: AWTWPSGFCSRLNVDGAARGPRC*RSHCPS
Trigger: AGATGGACAGTGGCTACGCCAGCATCGAGGGCCGCG...TGCCGCCCCATCCACGTTGAGACGCGAACAAAACCCAGACGGCCAGGTCCAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp GGGTCGTGGCGCAGGAACTCGTGGAACAGCGCGTCCGTCTTCTCGTCGATGCTGTCGAAGTGCGGGTCGTaGCGCAGGAACTCGTGGAAC +
Preference number: 4 (lower is better)
Translates to: GSWRRNSWNSASVFSSMLSKCGS*RRNSWN
Trigger: GTTCCACGAGTTCCTGCGCCACGACCCGCACTTCGA...CAGCATCGACGAGAAGACGGACGCGCTGTTCCACGAGTTCCTGCGCCACGACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR CCA 90 bp CAGCCGGCGTGTCGTCGAAGTGCGGGTCGTGGCGCAGGAACTCGTGGAACAGCGTCTGCCCACCCATGCTaGATAACCAGCAGGAGGACA +
Preference number: 4 (lower is better)
Translates to: QPACRRSAGRGAGTRGTASAHPC*ITSRRT
Trigger: TGTCCTCCTGCTGGTTATCCAGCATGGGTGGGCAGA...CGCTGTTCCACGAGTTCCTGCGCCACGACCCGCACTTCGACGACACGCCGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR CCA 90 bp GGTGCCGCTTGGGGGAACCTCTCGTGTCCAGACTGGCTGCCCGCTGGCTGGGCTTTGGACCTGGCCGTCTaGGTTTTGTTCGCGTCTCAA +
Preference number: 4 (lower is better)
Translates to: GAAWGNLSCPDWLPAGWALDLAV*VLFASQ
Trigger: TTGAGACGCGAACAAAACCCAGACGGCCAGGTCCAA...AGCCCAGCCAGCGGGCAGCCAGTCTGGACACGAGAGGTTCCCCCAAGCGGCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648750.1
CDS-3UTR CCA 90 bp GCCCAGCACCCGGCAAGCACCGGAAAGAGCAGTGCACACTTCGGCGGCGCGAGGTTGGACCTGGCCGTCTaGGTTTTGTTCGCGTCTCAA +
Preference number: 4 (lower is better)
Translates to: AQHPASTGKSSAHFGGARLDLAV*VLFASQ
Trigger: TTGAGACGCGAACAAAACCCAGACGGCCAGGTCCAA...CCTCGCGCCGCCGAAGTGTGCACTGCTCTTTCCGGTGCTTGCCGGGTGCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR TCA 90 bp GAACCCTTCAGGCCTCGGACTCCACCAGCAAGCAGCAGTACCAGCGCCATCCTCCAGGCGGAGAATTTATaGATGGAGAGCGCGGCGCGG +
Preference number: 4 (lower is better)
Translates to: EPFRPRTPPASSSTSAILQAENL*MESAAR
Trigger: CCGCGCCGCGCTCTCCATTCATAAATTCTCCGCCTG...GAGGATGGCGCTGGTACTGCTGCTTGCTGGTGGAGTCCGAGGCCTGAAGGGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR CCA 90 bp CCTTCCCCAGAGTCGCTAGATGCCGAGGGGCTGATCTCTGCGAAGTCAGTGGCGTCGTCAGGGCTACTGTaGCAGTGGTGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: PSPESLDAEGLISAKSVASSGLL*QWWWWW
Trigger: CCACCACCACCACCACTGCCACAGTAGCCCTGACGA...CGCCACTGACTTCGCAGAGATCAGCCCCTCGGCATCTAGCGACTCTGGGGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648750.1
CDS-3UTR CCA 90 bp GCTTGGACCTGGCCGTCTGGGTTTTGTTCGCGTCTCAACGTGGATGGGGCGGCACAGCCTTGGTGCTCCTaGTACCGGCATCCAACGAGG +
Preference number: 4 (lower is better)
Translates to: AWTWPSGFCSRLNVDGAAQPWCS*YRHPTR
Trigger: CCTCGTTGGATGCCGGTACCAGGAGCACCAAGGCTG...TGCCGCCCCATCCACGTTGAGACGCGAACAAAACCCAGACGGCCAGGTCCAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp CCTTCCCCAGAGTCGCTAGATGCCGAGGGGCTGATCTCTGCGAAGTCAGTGGCGGGAAGTGGTGCCGCTTaGGGGAACCTCTCGTGTCCA +
Preference number: 4 (lower is better)
Translates to: PSPESLDAEGLISAKSVAGSGAA*GNLSCP
Trigger: TGGACACGAGAGGTTCCCCCAAGCGGCACCACTTCC...CGCCACTGACTTCGCAGAGATCAGCCCCTCGGCATCTAGCGACTCTGGGGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
CDS-3UTR CCA 90 bp GCTTGGACCTGGCCGTCTGGGTTTTGTTCGCGTCTCAACGTGGATGGGGCGGCATCGAAGTGCGGGTCGTaGCGCAGGAACTCGTGGAAC +
Preference number: 4 (lower is better)
Translates to: AWTWPSGFCSRLNVDGAASKCGS*RRNSWN
Trigger: GTTCCACGAGTTCCTGCGCCACGACCCGCACTTCGA...TGCCGCCCCATCCACGTTGAGACGCGAACAAAACCCAGACGGCCAGGTCCAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp GAACCCTTCAGGCCTCGGACTCCACCAGCAAGCAGCAGTACCAGCGCCATCCTCTCCTCTGGTCCATGCTaGAGAGGTGGCCCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: EPFRPRTPPASSSTSAILSSGPC*RGGPSE
Trigger: CTCACTGGGGCCACCTCTCCAGCATGGACCAGAGGA...GAGGATGGCGCTGGTACTGCTGCTTGCTGGTGGAGTCCGAGGCCTGAAGGGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR CCA 90 bp TTGTTCGCGTCTCAACGTGGATGGGGCGGCAGCGGGGCGGGCGCCGTTGACATGGACTCGGGCGGGCCTTaGAAGGTGAGAGCTTTAAAA +
Preference number: 4 (lower is better)
Translates to: LFASQRGWGGSGAGAVDMDSGGP*KVRALK
Trigger: TTTTAAAGCTCTCACCTTCCAAGGCCCGCCCGAGTC...CATGTCAACGGCGCCCGCCCCGCTGCCGCCCCATCCACGTTGAGACGCGAACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR TCA 90 bp CATCCAGAAAAGAAAAACACGAGAAACGCCATCGCGGGATGGTGCAGACGCGGCAGTGGCGCCCGCGGCTaGGTTGTAGGGGTCACCTGG +
Preference number: 4 (lower is better)
Translates to: HPEKKNTRNAIAGWCRRGSGARG*VVGVTW
Trigger: CCAGGTGACCCCTACAACTCAGCCGCGGGCGCCACT...GCCGCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGTTTTTCTTTTCTGGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp TCATCCAGAAAAGAAAAACACGAGAAACGCCATCGCGGGATGGTGCAGACGCGGCTGCAGAACGGTACCTaGCCCGGATCCCGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: SSRKEKHEKRHRGMVQTRLQNGT*PGSRAR
Trigger: GCGGGCCCGGGATCCGGGGCAGGTACCGTTCTGCAG...CCGCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGTTTTTCTTTTCTGGATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp AAAACACGAGAAACGCCATCGCGGGATGGTGCAGACGCGGCGGGGACTCGGAGGTGTCCAGGTAGGTGGTaGTGGTCTTCTCCGCTTCCT +
Preference number: 4 (lower is better)
Translates to: KTRETPSRDGADAAGTRRCPGRW*WSSPLP
Trigger: AGGAAGCGGAGAAGACCACCACCACCTACCTGGACA...CCTCCGAGTCCCCGCCGCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp AAAACACGAGAAACGCCATCGCGGGATGGTGCAGACGCGGCGGGGACTCGGAGGCGTTGTCCAGGTAGGTaGTGGTGGTCTTCTCCGCTT +
Preference number: 4 (lower is better)
Translates to: KTRETPSRDGADAAGTRRRCPGR*WWSSPL
Trigger: AAGCGGAGAAGACCACCACCACCTACCTGGACAACG...CCTCCGAGTCCCCGCCGCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp CATCCAGAAAAGAAAAACACGAGAAACGCCATCGCGGGATGGTGCAGACGCGGCAGACCCGGCGGCCCGTaGAGCTGGTGGACAGGAAGC +
Preference number: 4 (lower is better)
Translates to: HPEKKNTRNAIAGWCRRGRPGGP*SWWTGS
Trigger: GCTTCCTGTCCACCAGCTCCACGGGCCGCCGGGTCT...GCCGCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGTTTTTCTTTTCTGGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp AAGCTTGGACCTGGCCGTCTGGGTTTTGTTCGCGTCTCAACGTGGATGGGGCGGTCTCTGCGAAGTCAGTaGCGCCCGCGGCTGAGTTGT +
Preference number: 4 (lower is better)
Translates to: KLGPGRLGFVRVSTWMGRSLRSQ*RPRLSC
Trigger: ACAACTCAGCCGCGGGCGCCACTGACTTCGCAGAGA...CCGCCCCATCCACGTTGAGACGCGAACAAAACCCAGACGGCCAGGTCCAAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp GCTGGGCTCCAGCTTCCACTTCTTGACCTTGAAATAGGGGCTGGCCCCATCCAGTGGATGAAGTCCTCCTaGGGGGCATCCCCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: AGLQLPLLDLEIGAGPIQWMKSS*GASPSS
Trigger: GGAGGAGGGGGATGCCCCCCAGGAGGACTTCATCCA...CTGGATGGGGCCAGCCCCTATTTCAAGGTCAAGAAGTGGAAGCTGGAGCCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
3UTR CAA 72 bp TCCGTCAGTGTGTACCGGCGACCCTTGTCCTGCGTCTaGCGGCTCTGCTCAAACAGCGCCGCCTCATTGAAG +
Preference number: 4 (lower is better)
Translates to: SVSVYRRPLSCV*RLCSNSAASLK
Trigger: CTTCAATGAGGCGGCGCTGTTTGAGCAGAGCCGCAAGACGCAGGACAAGGGTCGCCGGTACACACTGACGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648750.1
CDS-3UTR TCA 90 bp GCTGGGCTCCAGCTTCCACTTCTTGACCTTGAAATAGGGGCTGGCCCCATCCAGCAGGCGGAGAATTTATaGATGGAGAGCGCGGCGCGG +
Preference number: 4 (lower is better)
Translates to: AGLQLPLLDLEIGAGPIQQAENL*MESAAR
Trigger: CCGCGCCGCGCTCTCCATTCATAAATTCTCCGCCTG...CTGGATGGGGCCAGCCCCTATTTCAAGGTCAAGAAGTGGAAGCTGGAGCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648750.1
CDS-3UTR CCA 90 bp CCTTCCCCAGAGTCGCTAGATGCCGAGGGGCTGATCTCTGCGAAGTCAGTGGCGCGTTGTCCAGGTAGGTaGTGGTGGTCTTCTCCGCTT +
Preference number: 4 (lower is better)
Translates to: PSPESLDAEGLISAKSVARCPGR*WWSSPL
Trigger: AAGCGGAGAAGACCACCACCACCTACCTGGACAACG...CGCCACTGACTTCGCAGAGATCAGCCCCTCGGCATCTAGCGACTCTGGGGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648750.1
CDS-3UTR CCA 90 bp ACCGGCATCCAACGAGGTGCCTTCCCCAGAGTCGCTAGATGCCGAGGGGCTGATGCATTCTTCAGGTGGTaGAAGTCCCCCTCCGTCAGT +
Preference number: 4 (lower is better)
Translates to: TGIQRGAFPRVARCRGADAFFRW*KSPSVS
Trigger: ACTGACGGAGGGGGACTTCCACCACCTGAAGAATGC...ATCAGCCCCTCGGCATCTAGCGACTCTGGGGAAGGCACCTCGTTGGATGCCGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
CDS-3UTR CCA 90 bp CTGGCTGGGCTCCAGCTTCCACTTCTTGACCTTGAAATAGGGGCTGGCCCCATCCGGGCATTCTTCAGGTaGTGGAAGTCCCCCTCCGTC +
Preference number: 4 (lower is better)
Translates to: LAGLQLPLLDLEIGAGPIRAFFR*WKSPSV
Trigger: GACGGAGGGGGACTTCCACCACCTGAAGAATGCCCG...GATGGGGCCAGCCCCTATTTCAAGGTCAAGAAGTGGAAGCTGGAGCCCAGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
CDS-3UTR CCA 90 bp GGCCCTCCAGCCTTGGTGCTCCTGGTACCGGCATCCAACGAGGTGCCTTCCCCACCTGAGTCACACTCGTaGATGGTGACAATCTTGAGG +
Preference number: 4 (lower is better)
Translates to: GPPALVLLVPASNEVPSPPESHS*MVTILR
Trigger: CCTCAAGATTGTCACCATCCACGAGTGTGACTCAGG...TGGGGAAGGCACCTCGTTGGATGCCGGTACCAGGAGCACCAAGGCTGGAGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
CDS-3UTR CCA 90 bp CCAGAAAAGAAAAACACGAGAAACGCCATCGCGGGATGGTGCAGACGCGGCGGGGGAAGTGGTGCCGCTTaGGGGAACCTCTCGTGTCCA +
Preference number: 4 (lower is better)
Translates to: PEKKNTRNAIAGWCRRGGGSGAA*GNLSCP
Trigger: TGGACACGAGAGGTTCCCCCAAGCGGCACCACTTCC...CCCGCCGCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGTTTTTCTTTTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp AAGCTTGGACCTGGCCGTCTGGGTTTTGTTCGCGTCTCAACGTGGATGGGGCGGTGCTGCTGGCCGGAGTaGTCACAGCAGCTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: KLGPGRLGFVRVSTWMGRCCWPE*SQQLLR
Trigger: TCTCAGAAGCTGCTGTGACCACTCCGGCCAGCAGCA...CCGCCCCATCCACGTTGAGACGCGAACAAAACCCAGACGGCCAGGTCCAAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR TCA 90 bp TATCATCCAGAAAAGAAAAACACGAGAAACGCCATCGCGGGATGGTGCAGACGCCCGGCTCCTCCTCGATaGCGGGGATGGCGGGGTCGT +
Preference number: 4 (lower is better)
Translates to: YHPEKKNTRNAIAGWCRRPAPPR*RGWRGR
Trigger: ACGACCCCGCCATCCCCGTCATCGAGGAGGAGCCGG...GCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGTTTTTCTTTTCTGGATGATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp AAAACACGAGAAACGCCATCGCGGGATGGTGCAGACGCGGCGGGGACTCGGAGGCAGGAAAAGTCAACATaGTTCTCTCCGGGAGTCACG +
Preference number: 4 (lower is better)
Translates to: KTRETPSRDGADAAGTRRQEKST*FSPGVT
Trigger: CGTGACTCCCGGAGAGAAGCATGTTGACTTTTCCTG...CCTCCGAGTCCCCGCCGCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR GCA 90 bp GCAATAAATAAAGCTTGGGAAGCTTGGACCTGGCCGTCTGGGTTTTGTTCGCGTTGGCGGCGCGGTTATTaGTCGGAGGCGGCGCGGGCT +
Preference number: 4 (lower is better)
Translates to: AINKAWEAWTWPSGFCSRWRRGY*SEAARA
Trigger: AGCCCGCGCCGCCTCCGAGCAATAACCGCGCCGCCA...ACGCGAACAAAACCCAGACGGCCAGGTCCAAGCTTCCCAAGCTTTATTTATTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp ATCCAACGAGGTGCCTTCCCCAGAGTCGCTAGATGCCGAGGGGCTGATCTCTGCGCATTCTTCAGGTGGTaGAAGTCCCCCTCCGTCAGT +
Preference number: 4 (lower is better)
Translates to: IQRGAFPRVARCRGADLCAFFRW*KSPSVS
Trigger: ACTGACGGAGGGGGACTTCCACCACCTGAAGAATGC...GCAGAGATCAGCCCCTCGGCATCTAGCGACTCTGGGGAAGGCACCTCGTTGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
CDS-3UTR CCA 90 bp CATCCAGAAAAGAAAAACACGAGAAACGCCATCGCGGGATGGTGCAGACGCGGCCAGGGAAGTTGCCCTTaGGTTGGGGGAGGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: HPEKKNTRNAIAGWCRRGQGSCP*VGGGVL
Trigger: CAGCACCCCTCCCCCAACCCAAGGGCAACTTCCCTG...GCCGCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGTTTTTCTTTTCTGGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR TCA 90 bp TCATCCAGAAAAGAAAAACACGAGAAACGCCATCGCGGGATGGTGCAGACGCGGTCAGGAGCCCGAAGCTaGGAGCCGTTCACGCCCCTT +
Preference number: 4 (lower is better)
Translates to: SSRKEKHEKRHRGMVQTRSGARS*EPFTPL
Trigger: AAGGGGCGTGAACGGCTCTCAGCTTCGGGCTCCTGA...CCGCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGTTTTTCTTTTCTGGATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp TCATCCAGAAAAGAAAAACACGAGAAACGCCATCGCGGGATGGTGCAGACGCGGGCCCTCCAGCCTTGGTaGTCCTGGTACCGGCATCCA +
Preference number: 4 (lower is better)
Translates to: SSRKEKHEKRHRGMVQTRALQPW*SWYRHP
Trigger: TGGATGCCGGTACCAGGAGCACCAAGGCTGGAGGGC...CCGCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGTTTTTCTTTTCTGGATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR GCA 90 bp GCAATAAATAAAGCTTGGGAAGCTTGGACCTGGCCGTCTGGGTTTTGTTCGCGTCCGAGTCGCGGTCGTTaGCGCTGCTGCTGTGGTCCG +
Preference number: 4 (lower is better)
Translates to: AINKAWEAWTWPSGFCSRPSRGR*RCCCGP
Trigger: CGGACCACAGCAGCAGCGGCAACGACCGCGACTCGG...ACGCGAACAAAACCCAGACGGCCAGGTCCAAGCTTCCCAAGCTTTATTTATTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp CATCCAGAAAAGAAAAACACGAGAAACGCCATCGCGGGATGGTGCAGACGCGGCTGGCGCAGGAACTCGTaGAACAGCGCGTCCGTCTTC +
Preference number: 4 (lower is better)
Translates to: HPEKKNTRNAIAGWCRRGWRRNS*NSASVF
Trigger: GAAGACGGACGCGCTGTTCCACGAGTTCCTGCGCCA...GCCGCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGTTTTTCTTTTCTGGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp GCAATAAATAAAGCTTGGGAAGCTTGGACCTGGCCGTCTGGGTTTTGTTCGCGTGTTCGCGTCTCAACGTaGATGGGGCGGCAGCGGGGC +
Preference number: 4 (lower is better)
Translates to: AINKAWEAWTWPSGFCSRVRVST*MGRQRG
Trigger: GCCCCGCTGCCGCCCCATCCACGTTGAGACGCGAAC...ACGCGAACAAAACCCAGACGGCCAGGTCCAAGCTTCCCAAGCTTTATTTATTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
3UTR CAA 72 bp ACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAATTaGGCAATAAATAAAGCTTGGGAAGCTTGGACCTGG +
Preference number: 4 (lower is better)
Translates to: TRRVPCGRGRPN*AINKAWEAWTW
Trigger: CCAGGTCCAAGCTTCCCAAGCTTTATTTATTGCCAAATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp GCAATAAATAAAGCTTGGGAAGCTTGGACCTGGCCGTCTGGGTTTTGTTCGCGTTGGTGGTGGCGGCTGTaGCCATGGTGGCTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: AINKAWEAWTWPSGFCSRWWWRL*PWWLWA
Trigger: AGCCCACAGCCACCATGGCCACAGCCGCCACCACCA...ACGCGAACAAAACCCAGACGGCCAGGTCCAAGCTTCCCAAGCTTTATTTATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp GCAATAAATAAAGCTTGGGAAGCTTGGACCTGGCCGTCTGGGTTTTGTTCGCGTGTCGGGGTCTTGGGCTaGGTGGGTGCCGTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: AINKAWEAWTWPSGFCSRVGVLG*VGAVVQ
Trigger: CTGGACAACGGCACCCACCCAGCCCAAGACCCCGAC...ACGCGAACAAAACCCAGACGGCCAGGTCCAAGCTTCCCAAGCTTTATTTATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000650044.1
CDS-3UTR CCA 90 bp TATCATCCAGAAAAGAAAAACACGAGAAACGCCATCGCGGGATGGTGCAGACGCCGGAAGTCGGGGTCTTaGGCTGGGTGGGTGCCGTTG +
Preference number: 4 (lower is better)
Translates to: YHPEKKNTRNAIAGWCRRRKSGS*AGWVPL
Trigger: CAACGGCACCCACCCAGCCCAAGACCCCGACTTCCG...GCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGTTTTTCTTTTCTGGATGATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000650044.1
CDS-3UTR TCA 90 bp GCAATAAATAAAGCTTGGGAAGCTTGGACCTGGCCGTCTGGGTTTTGTTCGCGTCAGCACACGCCGCAGTaGGGTAAACGGTCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: AINKAWEAWTWPSGFCSRQHTPQ*GKRSRR
Trigger: CCTCCGAGACCGTTTACCTCACTGCGGCGTGTGCTG...ACGCGAACAAAACCCAGACGGCCAGGTCCAAGCTTCCCAAGCTTTATTTATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp TCATCCAGAAAAGAAAAACACGAGAAACGCCATCGCGGGATGGTGCAGACGCGGCGTTGTCCAGGTAGGTaGTGGTGGTCTTCTCCGCTT +
Preference number: 4 (lower is better)
Translates to: SSRKEKHEKRHRGMVQTRRCPGR*WWSSPL
Trigger: AAGCGGAGAAGACCACCACCACCTACCTGGACAACG...CCGCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGTTTTTCTTTTCTGGATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
3UTR CAA 72 bp ATGAGCCAGTGTGTTTTGCAGGGGATGCGTCTTGCATaGACCCTGAGCTGTGGCGCCTGCTTATTAAGCAGG +
Preference number: 4 (lower is better)
Translates to: MSQCVLQGMRLA*TLSCGACLLSR
Trigger: CCTGCTTAATAAGCAGGCGCCACAGCTCAGGGTCAATGCAAGACGCATCCCCTGCAAAACACACTGGCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR GCA 90 bp TATCATCCAGAAAAGAAAAACACGAGAAACGCCATCGCGGGATGGTGCAGACGCGCAGGGGATGCGTCTTaGATTGACCCTGAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: YHPEKKNTRNAIAGWCRRAGDAS*IDPELW
Trigger: CCACAGCTCAGGGTCAATGCAAGACGCATCCCCTGC...GCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGTTTTTCTTTTCTGGATGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR CCA 90 bp TATCATCCAGAAAAGAAAAACACGAGAAACGCCATCGCGGGATGGTGCAGACGCCCAGGTAGGTGGTGGTaGTCTTCTCCGCTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: YHPEKKNTRNAIAGWCRRPGRWW*SSPLPP
Trigger: TGGAGGAAGCGGAGAAGACCACCACCACCTACCTGG...GCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGTTTTTCTTTTCTGGATGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp TATCATCCAGAAAAGAAAAACACGAGAAACGCCATCGCGGGATGGTGCAGACGCCGGAGAATTTATGAATaGAGAGCGCGGCGCGGGGGA +
Preference number: 4 (lower is better)
Translates to: YHPEKKNTRNAIAGWCRRRRIYE*RARRGG
Trigger: TCCCCCGCGCCGCGCTCTCCATTCATAAATTCTCCG...GCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGTTTTTCTTTTCTGGATGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp GCAATAAATAAAGCTTGGGAAGCTTGGACCTGGCCGTCTGGGTTTTGTTCGCGTGCATTCTTCAGGTGGTaGAAGTCCCCCTCCGTCAGT +
Preference number: 4 (lower is better)
Translates to: AINKAWEAWTWPSGFCSRAFFRW*KSPSVS
Trigger: ACTGACGGAGGGGGACTTCCACCACCTGAAGAATGC...ACGCGAACAAAACCCAGACGGCCAGGTCCAAGCTTCCCAAGCTTTATTTATTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp TCAATATTTATATCATCCAGAAAAGAAAAACACGAGAAACGCCATCGCGGGATGGGCGGCCCGTGGAGCTaGTGGACAGGAAGCGTTCGG +
Preference number: 4 (lower is better)
Translates to: SIFISSRKEKHEKRHRGMGGPWS*WTGSVR
Trigger: CCGAACGCTTCCTGTCCACCAGCTCCACGGGCCGCC...CATCCCGCGATGGCGTTTCTCGTGTTTTTCTTTTCTGGATGATATAAATATTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp TATCATCCAGAAAAGAAAAACACGAGAAACGCCATCGCGGGATGGTGCAGACGCCCTGAGTCACACTCGTaGATGGTGACAATCTTGAGG +
Preference number: 4 (lower is better)
Translates to: YHPEKKNTRNAIAGWCRRPESHS*MVTILR
Trigger: CCTCAAGATTGTCACCATCCACGAGTGTGACTCAGG...GCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGTTTTTCTTTTCTGGATGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR TCA 90 bp TCAATATTTATATCATCCAGAAAAGAAAAACACGAGAAACGCCATCGCGGGATGGGGACTGAGGGCGAGTaGTCGTTGTCCTCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: SIFISSRKEKHEKRHRGMGTEGE*SLSSGA
Trigger: GGCTCCTGAGGACAACGATCACTCGCCCTCAGTCCC...CATCCCGCGATGGCGTTTCTCGTGTTTTTCTTTTCTGGATGATATAAATATTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CCA 90 bp TCAATATTTATATCATCCAGAAAAGAAAAACACGAGAAACGCCATCGCGGGATGCGTAGTTGTCCAGGATaGGGTCTGGCTCTGCCGTGG +
Preference number: 4 (lower is better)
Translates to: SIFISSRKEKHEKRHRGMRSCPG*GLALPW
Trigger: CCACGGCAGAGCCAGACCCCATCCTGGACAACTACG...CATCCCGCGATGGCGTTTCTCGTGTTTTTCTTTTCTGGATGATATAAATATTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS CCA 90 bp TCTGAACTGGGGAGGAGGGCCCTCAGCGCCGGGACGAGCGGCCCATaGGCGGCGGGCTGGCGGCGGGCGGCTGCGTGGCGCTCGCGGCTG +
Preference number: 5 (lower is better)
Translates to: SELGRRALSAGTSGP*AAGWRRAAAWRSRL
Trigger: CAGCCGCGAGCGCCACGCAGCCGCCCGCCGCCAGCCCGCCGCCCATGGGCCGCTCGTCCCGGCGCTGAGGGCCCTCCTCCCCAGTTCAGA
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000382477.6
ENST00000589260.5
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS CCA 90 bp GCGGCGGGCGGCTGCGTGGCGCTCGCGGCTGGCTCCGGCGCCCGGTaGCCGCGGAGCAGGCGGAGAATTTATGAATGGAGAGCGCGGCGC +
Preference number: 5 (lower is better)
Translates to: AAGGCVALAAGSGAR*PRSRRRIYEWRARR
Trigger: GCGCCGCGCTCTCCATTCATAAATTCTCCGCCTGCTCCGCGGCCACCGGGCGCCGGAGCCAGCCGCGAGCGCCACGCAGCCGCCCGCCGC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382477.6
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CAA 90 bp GCGGTAGCTGGTCTGGGCCTGCTCGGGGCCCGCGTCCCGCTCGGCGTCCGGCTCCCGGGCCCTCCAGCCTaGGTGCTCCTGGTACCGGCA +
Preference number: 5 (lower is better)
Translates to: AVAGLGLLGARVPLGVRLPGPPA*VLLVPA
Trigger: TGCCGGTACCAGGAGCACCAAGGCTGGAGGGCCCGG...GAGCCGGACGCCGAGCGGGACGCGGGCCCCGAGCAGGCCCAGACCAGCTACCGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000591127.1
ENST00000648750.1
CDS-3UTR CAA 90 bp GGCTCCACAGGTCGCGGTAGCTGGTCTGGGCCTGCTCGGGGCCCGCGTCCCGCTGTGGCGGCGCGGTTATaGCTCGGAGGCGGCGCGGGC +
Preference number: 5 (lower is better)
Translates to: GSTGRGSWSGPARGPRPAVAARL*LGGGAG
Trigger: GCCCGCGCCGCCTCCGAGCAATAACCGCGCCGCCAC...AGCGGGACGCGGGCCCCGAGCAGGCCCAGACCAGCTACCGCGACCTGTGGAGCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR CAA 90 bp GCGGTAGCTGGTCTGGGCCTGCTCGGGGCCCGCGTCCCGCTCGGCGTCCGGCTCACCGAGTCGCGGTCGTaGCCGCTGCTGCTGTGGTCC +
Preference number: 5 (lower is better)
Translates to: AVAGLGLLGARVPLGVRLTESRS*PLLLWS
Trigger: GGACCACAGCAGCAGCGGCAACGACCGCGACTCGGT...GAGCCGGACGCCGAGCGGGACGCGGGCCCCGAGCAGGCCCAGACCAGCTACCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR CAA 90 bp AAGAGCAGTGCACACTTCGGCGGCGCGAGGGCGGCCGGGGCTCTGCGCCTGCGCCCACGCTGCCACTGTTaGCGGGCGTGCGGGTGCGCG +
Preference number: 5 (lower is better)
Translates to: KSSAHFGGARAAGALRLRPRCHC*RACGCA
Trigger: CGCGCACCCGCACGCCCGCAAACAGTGGCAGCGTGG...GCGCAGGCGCAGAGCCCCGGCCGCCCTCGCGCCGCCGAAGTGTGCACTGCTCTT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CAA 90 bp GCCATCGCGGGATGGTGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGCCGGAAGTCGGGGTCTaGGGCTGGGTGGGTGCCGTT +
Preference number: 5 (lower is better)
Translates to: AIAGWCRRGGDSEGAVRAPEVGV*GWVGAV
Trigger: AACGGCACCCACCCAGCCCAAGACCCCGACTTCCGG...CGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCACCATCCCGCGATGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000650044.1
CDS-3UTR CAA 90 bp CTCCCGCTGCCTCGGCCGCCTCTGCCGAGAGCAGGGGGCGGGCTGGCCAGAAAGCCGGGCCCTCCAGCCTaGGTGCTCCTGGTACCGGCA +
Preference number: 5 (lower is better)
Translates to: LPLPRPPLPRAGGGLARKPGPPA*VLLVPA
Trigger: TGCCGGTACCAGGAGCACCAAGGCTGGAGGGCCCGG...CTTTCTGGCCAGCCCGCCCCCTGCTCTCGGCAGAGGCGGCCGAGGCAGCGGGAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591127.1
CDS-3UTR CAA 90 bp GGTGGCGGCGCGGTTATTGCTCGGAGGCGGCGCGGGCTGCCGCCAGCACACGCCAGGCCAGCCGCCAGCTaGTCCAGCACCGACCCGGAT +
Preference number: 5 (lower is better)
Translates to: GGGAVIARRRRGLPPAHARPAAS*SSTDPD
Trigger: ATCCGGGTCGGTGCTGGACAAGCTGGCGGCTGGCCT...GGCGTGTGCTGGCGGCAGCCCGCGCCGCCTCCGAGCAATAACCGCGCCGCCACC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CAA 90 bp AGTGGGCTGCGCGACCCTCGGGTGGCGGGCCCTGCGACTAAGCGGCCGCCCCGTGGGCGTCCAGTGGCATaGTCCCACGACGTCGTCAGG +
Preference number: 5 (lower is better)
Translates to: SGLRDPRVAGPATKRPPRGRPVA*SHDVVR
Trigger: CCTGACGACGTCGTGGGACAATGCCACTGGACGCCC...ACGGGGCGGCCGCTTAGTCGCAGGGCCCGCCACCCGAGGGTCGCGCAGCCCACT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CAA 90 bp GCCATCGCGGGATGGTGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGTCCTCCATGGCCCTGTaGAGGCGCTGGTGGACGTCC +
Preference number: 5 (lower is better)
Translates to: AIAGWCRRGGDSEGAVRASSMAL*RRWWTS
Trigger: GGACGTCCACCAGCGCCTCAACAGGGCCATGGAGGA...CGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCACCATCCCGCGATGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CAA 90 bp AGGCCCCGTGCGGCGCCGGAGAAGCTGCCAGAGAGATGGGCCCAGGACGCGGGACCGGGCCCTCCAGCCTaGGTGCTCCTGGTACCGGCA +
Preference number: 5 (lower is better)
Translates to: RPRAAPEKLPERWAQDAGPGPPA*VLLVPA
Trigger: TGCCGGTACCAGGAGCACCAAGGCTGGAGGGCCCGG...TCCCGCGTCCTGGGCCCATCTCTCTGGCAGCTTCTCCGGCGCCGCACGGGGCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CAA 90 bp GGATGGTGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCTGGAAGTGGTGCCGCTaGGGGGAACCTCTCGTGTCC +
Preference number: 5 (lower is better)
Translates to: GWCRRGGDSEGAVRARPPWKWCR*GEPLVS
Trigger: GGACACGAGAGGTTCCCCCAAGCGGCACCACTTCCA...GGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCACCATCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CAA 90 bp AAGAGCAGTGCACACTTCGGCGGCGCGAGGGCGGCCGGGGCTCTGCGCCTGCGCACCGAGTCGCGGTCGTaGCCGCTGCTGCTGTGGTCC +
Preference number: 5 (lower is better)
Translates to: KSSAHFGGARAAGALRLRTESRS*PLLLWS
Trigger: GGACCACAGCAGCAGCGGCAACGACCGCGACTCGGT...GCGCAGGCGCAGAGCCCCGGCCGCCCTCGCGCCGCCGAAGTGTGCACTGCTCTT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CAA 90 bp ACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAATTTGGCAACCTCTGGGAGGGGCCTaGCCGCTGGAGGCAGGCGAG +
Preference number: 5 (lower is better)
Translates to: TRRGLGGCRAGEAAQIWQPLGGA*PLEAGE
Trigger: CTCGCCTGCCTCCAGCGGCAAGGCCCCTCCCAGAGG...TTGCCAAATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR CAA 90 bp GCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAATTTGGCAATAGCGGGGCGGGCGCCGTaGACATGCGGAGGGCAGTGG +
Preference number: 5 (lower is better)
Translates to: AAGTRRVPCGRGRPNLAIAGRAP*TCGGQW
Trigger: CCACTGCCCTCCGCATGTCAACGGCGCCCGCCCCGC...TATTGCCAAATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CAA 90 bp AAGAGCAGTGCACACTTCGGCGGCGCGAGGGCGGCCGGGGCTCTGCGCCTGCGCGGGCGTCCAGTGGCATaGTCCCACGACGTCGTCAGG +
Preference number: 5 (lower is better)
Translates to: KSSAHFGGARAAGALRLRGRPVA*SHDVVR
Trigger: CCTGACGACGTCGTGGGACAATGCCACTGGACGCCC...GCGCAGGCGCAGAGCCCCGGCCGCCCTCGCGCCGCCGAAGTGTGCACTGCTCTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CAA 90 bp GCGCGTCCGTCTTCTCGTCGATGCTGTAGTCGCGGCGCGGGCGGCGGGGCCAGGGTGTACCGGCGACCCTaGTCCTGCGTCTTGCGGCTC +
Preference number: 5 (lower is better)
Translates to: ARPSSRRCCSRGAGGGARVYRRP*SCVLRL
Trigger: GAGCCGCAAGACGCAGGACAAGGGTCGCCGGTACAC...CCTGGCCCCGCCGCCCGCGCCGCGACTACAGCATCGACGAGAAGACGGACGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR CAA 90 bp CCGCGGCCCGCGCCTCACGACGCCCAGCACCCGGCAAGCACCGGAAAGAGCAGTCCGGAAGTCGGGGTCTaGGGCTGGGTGGGTGCCGTT +
Preference number: 5 (lower is better)
Translates to: PRPAPHDAQHPASTGKSSPEVGV*GWVGAV
Trigger: AACGGCACCCACCCAGCCCAAGACCCCGACTTCCGG...ACTGCTCTTTCCGGTGCTTGCCGGGTGCTGGGCGTCGTGAGGCGCGGGCCGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000650044.1
CDS-3UTR CAA 90 bp ACAGCGCGTCCGTCTTCTCGTCGATGCTGTAGTCGCGGCGCGGGCGGCGGGGCCACCGAGTCGCGGTCGTaGCCGCTGCTGCTGTGGTCC +
Preference number: 5 (lower is better)
Translates to: TARPSSRRCCSRGAGGGATESRS*PLLLWS
Trigger: GGACCACAGCAGCAGCGGCAACGACCGCGACTCGGT...GGCCCCGCCGCCCGCGCCGCGACTACAGCATCGACGAGAAGACGGACGCGCTGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR CAA 90 bp TGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAATTTTCGGCAGTCACGGTGTaGAGCCGCCTCCCGGCCCAG +
Preference number: 5 (lower is better)
Translates to: CRRGGDSEGAVRARPPKFSAVTV*SRLPAQ
Trigger: CTGGGCCGGGAGGCGGCTCAACACCGTGACTGCCGA...AAATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CAA 90 bp GCGACTAAGCGGCCGCCCCGTCCGGGACTGAGGGCGAGTGATCGTTGTCCTCAGGTGGCGGCGCGGTTATaGCTCGGAGGCGGCGCGGGC +
Preference number: 5 (lower is better)
Translates to: ATKRPPRPGLRASDRCPQVAARL*LGGGAG
Trigger: GCCCGCGCCGCCTCCGAGCAATAACCGCGCCGCCAC...CTGAGGACAACGATCACTCGCCCTCAGTCCCGGACGGGGCGGCCGCTTAGTCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS GCA 90 bp CCATCAGAGCCCGCCCACCTCCCATGCCCGATGCCCCAGCTGCCGTaGTCTGCCATCCACCCTGCCGGCCCTTGTCCTGCGTCTTGCGGC +
Preference number: 5 (lower is better)
Translates to: PSEPAHLPCPMPQLP*SAIHPAGPCPASCG
Trigger: GCCGCAAGACGCAGGACAAGGGCCGGCAGGGTGGATGGCAGAGCACGGCAGCTGGGGCATCGGGCATGGGAGGTGGGCGGGCTCTGATGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382477.6
CDS-3UTR CAA 90 bp CAGGTCGCGGTAGCTGGTCTGGGCCTGCTCGGGGCCCGCGTCCCGCTCGGCGTCTGGATGGTGACAATCTaGAGGGGCGGCAGGTGCAGG +
Preference number: 5 (lower is better)
Translates to: QVAVAGLGLLGARVPLGVWMVTI*RGGRCR
Trigger: CCTGCACCTGCCGCCCCTCAAGATTGTCACCATCCA...GACGCCGAGCGGGACGCGGGCCCCGAGCAGGCCCAGACCAGCTACCGCGACCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000591127.1
ENST00000648750.1
CDS-3UTR CAA 90 bp TGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAATTTAGGCCAGCCGCCAGCTaGTCCAGCACCGACCCGGAT +
Preference number: 5 (lower is better)
Translates to: CRRGGDSEGAVRARPPKFRPAAS*SSTDPD
Trigger: ATCCGGGTCGGTGCTGGACAAGCTGGCGGCTGGCCT...AAATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CAA 90 bp GCGACTAAGCGGCCGCCCCGTCCGGGACTGAGGGCGAGTGATCGTTGTCCTCAGGGACGCGGGTGGGACTaGGGACTCGGGCGGGCCTTG +
Preference number: 5 (lower is better)
Translates to: ATKRPPRPGLRASDRCPQGRGWD*GLGRAL
Trigger: CAAGGCCCGCCCGAGTCCCAAGTCCCACCCGCGTCC...CTGAGGACAACGATCACTCGCCCTCAGTCCCGGACGGGGCGGCCGCTTAGTCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS GCA 90 bp GTGGTGGTGGTGGTGGTGGCGGCTGTGGCCATGGTGGCTGTGGGCTaGATTCTGAACTGGGGAGGAGGGCCCTCAGCGCCGGGACGAGCG +
Preference number: 5 (lower is better)
Translates to: VVVVVVAAVAMVAVG*ILNWGGGPSAPGRA
Trigger: CGCTCGTCCCGGCGCTGAGGGCCCTCCTCCCCAGTTCAGAATGCAGCCCACAGCCACCATGGCCACAGCCGCCACCACCACCACCACCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000215376.7
ENST00000382477.6
ENST00000589260.5
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CAA 90 bp AAGAGCAGTGCACACTTCGGCGGCGCGAGGGCGGCCGGGGCTCTGCGCCTGCGCCCCTTGTCCTGCGTCTaGCGGCTCTGCTCAAACAGC +
Preference number: 5 (lower is better)
Translates to: KSSAHFGGARAAGALRLRPLSCV*RLCSNS
Trigger: GCTGTTTGAGCAGAGCCGCAAGACGCAGGACAAGGG...GCGCAGGCGCAGAGCCCCGGCCGCCCTCGCGCCGCCGAAGTGTGCACTGCTCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CAA 90 bp TGTCCTCAGGAGCCCGAAGCTGAGAGCCGTTCACGCCCCTTCCTTCCCGCCCAGGGAGTCTGCCCAGCCTaGGGAGCATGGGCGGGGCGG +
Preference number: 5 (lower is better)
Translates to: CPQEPEAESRSRPFLPAQGVCPA*GAWAGR
Trigger: CCGCCCCGCCCATGCTCCCAAGGCTGGGCAGACTCC...CTGGGCGGGAAGGAAGGGGCGTGAACGGCTCTCAGCTTCGGGCTCCTGAGGACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR CAA 90 bp CCCCGGGCCCTCCAGCCTTGGTGCTCCTGGTACCGGCATCCAACGAGGTGCCTTTCGGCAGTCACGGTGTaGAGCCGCCTCCCGGCCCAG +
Preference number: 5 (lower is better)
Translates to: PRALQPWCSWYRHPTRCLSAVTV*SRLPAQ
Trigger: CTGGGCCGGGAGGCGGCTCAACACCGTGACTGCCGA...AAGGCACCTCGTTGGATGCCGGTACCAGGAGCACCAAGGCTGGAGGGCCCGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648750.1
CDS-3UTR CAA 90 bp CACGACGCCCAGCACCCGGCAAGCACCGGAAAGAGCAGTGCACACTTCGGCGGCTCGGCAGTCACGGTGTaGAGCCGCCTCCCGGCCCAG +
Preference number: 5 (lower is better)
Translates to: HDAQHPASTGKSSAHFGGSAVTV*SRLPAQ
Trigger: CTGGGCCGGGAGGCGGCTCAACACCGTGACTGCCGA...GCCGCCGAAGTGTGCACTGCTCTTTCCGGTGCTTGCCGGGTGCTGGGCGTCGTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CAA 90 bp GCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAATTTGGCAATAGTGTACCGGCGACCCTaGTCCTGCGTCTTGCGGCTC +
Preference number: 5 (lower is better)
Translates to: AAGTRRVPCGRGRPNLAIVYRRP*SCVLRL
Trigger: GAGCCGCAAGACGCAGGACAAGGGTCGCCGGTACAC...TATTGCCAAATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CAA 90 bp GCTTGGACCTGGCCGTCTGGGTTTTGTTCGCGTCTCAACGTGGATGGGGCGGCAGCGGGGCGGGCGCCGTaGACATGCGGAGGGCAGTGG +
Preference number: 5 (lower is better)
Translates to: AWTWPSGFCSRLNVDGAAAGRAP*TCGGQW
Trigger: CCACTGCCCTCCGCATGTCAACGGCGCCCGCCCCGC...TGCCGCCCCATCCACGTTGAGACGCGAACAAAACCCAGACGGCCAGGTCCAAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CAA 90 bp CACGTCTCTCCCGCCGCCGAGGCCCCGTGCGGCGCCGGAGAAGCTGCCAGAGAGCTGGCCGTCTGGGTTTaGTTCGCGTCTCAACGTGGA +
Preference number: 5 (lower is better)
Translates to: HVSPAAEAPCGAGEAARELAVWV*FASQRG
Trigger: TCCACGTTGAGACGCGAACAAAACCCAGACGGCCAG...CTCTCTGGCAGCTTCTCCGGCGCCGCACGGGGCCTCGGCGGCGGGAGAGACGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS GCA 90 bp CGCTCAGCACGCGCCTGGGCCCACCTACGCCTTGGGCTGGGTGGGTaGCGTTGTCCAGGTAGGTGGTGGTGGTCTTCTCCGCTTCCTCCA +
Preference number: 5 (lower is better)
Translates to: RSARAWAHLRLGLGG*RCPGRWWWSSPLPP
Trigger: TGGAGGAAGCGGAGAAGACCACCACCACCTACCTGGACAACGGCACCCACCCAGCCCAAGGCGTAGGTGGGCCCAGGCGCGTGCTGAGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215376.7
ENST00000589260.5
CDS GCA 90 bp CTCTGCCATCCACCCTGCCGGCCCTTGTCCTGCGTCTTGCGGCTCTaGTCAAACAGCGCCGCCTCATTGAAGGAGACCCGGCGGCCCGTG +
Preference number: 5 (lower is better)
Translates to: LCHPPCRPLSCVLRL*SNSAASLKETRRPV
Trigger: CACGGGCCGCCGGGTCTCCTTCAATGAGGCGGCGCTGTTTGAGCAGAGCCGCAAGACGCAGGACAAGGGCCGGCAGGGTGGATGGCAGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382477.6
CDS CCA 90 bp CACTCACTCGCTCAGCACGCGCCTGGGCCCACCTACGCCTTGGGCTaGGTGGGTGCCGTTGTCCAGGTAGGTGGTGGTGGTCTTCTCCGC +
Preference number: 5 (lower is better)
Translates to: HSLAQHAPGPTYALG*VGAVVQVGGGGLLR
Trigger: GCGGAGAAGACCACCACCACCTACCTGGACAACGGCACCCACCCAGCCCAAGGCGTAGGTGGGCCCAGGCGCGTGCTGAGCGAGTGAGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215376.7
ENST00000589260.5
CDS-3UTR CAA 90 bp CCCCGGGCCCTCCAGCCTTGGTGCTCCTGGTACCGGCATCCAACGAGGTGCCTTGTGTACCGGCGACCCTaGTCCTGCGTCTTGCGGCTC +
Preference number: 5 (lower is better)
Translates to: PRALQPWCSWYRHPTRCLVYRRP*SCVLRL
Trigger: GAGCCGCAAGACGCAGGACAAGGGTCGCCGGTACAC...AAGGCACCTCGTTGGATGCCGGTACCAGGAGCACCAAGGCTGGAGGGCCCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
CDS-3UTR CAA 90 bp AAAACACGAGAAACGCCATCGCGGGATGGTGCAGACGCGGCGGGGACTCGGAGGCCGGGCCCTCCAGCCTaGGTGCTCCTGGTACCGGCA +
Preference number: 5 (lower is better)
Translates to: KTRETPSRDGADAAGTRRPGPPA*VLLVPA
Trigger: TGCCGGTACCAGGAGCACCAAGGCTGGAGGGCCCGG...CCTCCGAGTCCCCGCCGCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGTTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CAA 90 bp GGTGCCGCTTGGGGGAACCTCTCGTGTCCAGACTGGCTGCCCGCTGGCTGGGCTTGGAAGTGGTGCCGCTaGGGGGAACCTCTCGTGTCC +
Preference number: 5 (lower is better)
Translates to: GAAWGNLSCPDWLPAGWAWKWCR*GEPLVS
Trigger: GGACACGAGAGGTTCCCCCAAGCGGCACCACTTCCA...AGCCCAGCCAGCGGGCAGCCAGTCTGGACACGAGAGGTTCCCCCAAGCGGCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
CDS-3UTR CAA 90 bp GCTTGGACCTGGCCGTCTGGGTTTTGTTCGCGTCTCAACGTGGATGGGGCGGCACCACGCTGCCACTGTTaGCGGGCGTGCGGGTGCGCG +
Preference number: 5 (lower is better)
Translates to: AWTWPSGFCSRLNVDGAAPRCHC*RACGCA
Trigger: CGCGCACCCGCACGCCCGCAAACAGTGGCAGCGTGG...TGCCGCCCCATCCACGTTGAGACGCGAACAAAACCCAGACGGCCAGGTCCAAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CAA 90 bp AGAGTCGCTAGATGCCGAGGGGCTGATCTCTGCGAAGTCAGTGGCGCCCGCGGCAGGCCAGCCGCCAGCTaGTCCAGCACCGACCCGGAT +
Preference number: 5 (lower is better)
Translates to: RVARCRGADLCEVSGARGRPAAS*SSTDPD
Trigger: ATCCGGGTCGGTGCTGGACAAGCTGGCGGCTGGCCT...GCCGCGGGCGCCACTGACTTCGCAGAGATCAGCCCCTCGGCATCTAGCGACTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648750.1
CDS-3UTR CAA 90 bp GCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAATTTGGGACTCGGGCGGGCCTaGGAAGGTGAGAGCTTTAAA +
Preference number: 5 (lower is better)
Translates to: ADAAGTRRVPCGRGRPNLGLGRA*EGESFK
Trigger: TTTAAAGCTCTCACCTTCCAAGGCCCGCCCGAGTCC...CAAATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR CAA 90 bp GCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAATTTGCTGGCCGTCTGGGTTTaGTTCGCGTCTCAACGTGGA +
Preference number: 5 (lower is better)
Translates to: ADAAGTRRVPCGRGRPNLLAVWV*FASQRG
Trigger: TCCACGTTGAGACGCGAACAAAACCCAGACGGCCAG...CAAATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS CCA 90 bp TGGGGCGTCCAGTGGCATTGTCCCACGACGTCGTCAGGGCTACTGTaGCAGTGGTGGTGGTGGTGGTGGTGGCGGCTGTGGCCATGGTGG +
Preference number: 5 (lower is better)
Translates to: WGVQWHCPTTSSGLL*QWWWWWWWRLWPWW
Trigger: CCACCATGGCCACAGCCGCCACCACCACCACCACCACCACTGCCACAGTAGCCCTGACGACGTCGTGGGACAATGCCACTGGACGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000215376.7
ENST00000382477.6
ENST00000589260.5
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS CCA 90 bp GACACTCGTCCATCCGCTCACACACTCACTCGCTCAGCACGCGCCTaGGCCCACCTACGCCTTGGGCTGGGTGGGTGCCGTTGTCCAGGT +
Preference number: 5 (lower is better)
Translates to: DTRPSAHTLTRSARA*AHLRLGLGGCRCPG
Trigger: ACCTGGACAACGGCACCCACCCAGCCCAAGGCGTAGGTGGGCCCAGGCGCGTGCTGAGCGAGTGAGTGTGTGAGCGGATGGACGAGTGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215376.7
ENST00000589260.5
CDS CCA 90 bp GGTGGTGGAAGTCCCCCTCCGTCAGTGTGTACCTGCGACAGCATCTaGCCATCAGAGCCCGCCCACCTCCCATGCCCGATGCCCCAGCTG +
Preference number: 5 (lower is better)
Translates to: GGGSPPPSVCTCDSI*PSEPAHLPCPMPQL
Trigger: CAGCTGGGGCATCGGGCATGGGAGGTGGGCGGGCTCTGATGGCCAGATGCTGTCGCAGGTACACACTGACGGAGGGGGACTTCCACCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382477.6
CDS-3UTR CAA 90 bp GCTCAAGCGAGGCGCGCAGGCTCCACAGGTCGCGGTAGCTGGTCTGGGCCTGCTCCCTTGTCCTGCGTCTaGCGGCTCTGCTCAAACAGC +
Preference number: 5 (lower is better)
Translates to: AQARRAGSTGRGSWSGPAPLSCV*RLCSNS
Trigger: GCTGTTTGAGCAGAGCCGCAAGACGCAGGACAAGGG...AGCAGGCCCAGACCAGCTACCGCGACCTGTGGAGCCTGCGCGCCTCGCTTGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000591127.1
ENST00000648750.1
CDS-3UTR CAA 90 bp CGACGCCCAGCACCCGGCAAGCACCGGAAAGAGCAGTGCACACTTCGGCGGCGCCCCTTGTCCTGCGTCTaGCGGCTCTGCTCAAACAGC +
Preference number: 5 (lower is better)
Translates to: RRPAPGKHRKEQCTLRRRPLSCV*RLCSNS
Trigger: GCTGTTTGAGCAGAGCCGCAAGACGCAGGACAAGGG...GCGCCGCCGAAGTGTGCACTGCTCTTTCCGGTGCTTGCCGGGTGCTGGGCGTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CAA 90 bp TGTCCTCAGGAGCCCGAAGCTGAGAGCCGTTCACGCCCCTTCCTTCCCGCCCAGGTGTACCGGCGACCCTaGTCCTGCGTCTTGCGGCTC +
Preference number: 5 (lower is better)
Translates to: CPQEPEAESRSRPFLPAQVYRRP*SCVLRL
Trigger: GAGCCGCAAGACGCAGGACAAGGGTCGCCGGTACAC...CTGGGCGGGAAGGAAGGGGCGTGAACGGCTCTCAGCTTCGGGCTCCTGAGGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CAA 90 bp GCGACTAAGCGGCCGCCCCGTCCGGGACTGAGGGCGAGTGATCGTTGTCCTCAGGGGATGCGTCTTGCATaGACCCTGAGCTGTGGCGCC +
Preference number: 5 (lower is better)
Translates to: ATKRPPRPGLRASDRCPQGMRLA*TLSCGA
Trigger: GGCGCCACAGCTCAGGGTCAATGCAAGACGCATCCC...CTGAGGACAACGATCACTCGCCCTCAGTCCCGGACGGGGCGGCCGCTTAGTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR CAA 90 bp CCAGAAAAGAAAAACACGAGAAACGCCATCGCGGGATGGTGCAGACGCGGCGGGGCGGGGCGGGCGCCGTaGACATGCGGAGGGCAGTGG +
Preference number: 5 (lower is better)
Translates to: PEKKNTRNAIAGWCRRGGAGRAP*TCGGQW
Trigger: CCACTGCCCTCCGCATGTCAACGGCGCCCGCCCCGC...CCCGCCGCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGTTTTTCTTTTCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS CCA 90 bp TGGCATTGTCCCACGACGTCGTCAGGGCTACTGTGGCAGTGGTGGTaGTGGTGGTGGTGGCGGCTGTGGCCATGGTGGCTGTGGGCTGCA +
Preference number: 5 (lower is better)
Translates to: WHCPTTSSGLLWQWW*WWWWRLWPWWLWAA
Trigger: TGCAGCCCACAGCCACCATGGCCACAGCCGCCACCACCACCACCACCACCACTGCCACAGTAGCCCTGACGACGTCGTGGGACAATGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000215376.7
ENST00000382477.6
ENST00000589260.5
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS CCA 90 bp CAGTGGCATTGTCCCACGACGTCGTCAGGGCTACTGTGGCAGTGGTaGTGGTGGTGGTGGTGGCGGCTGTGGCCATGGTGGCTGTGGGCT +
Preference number: 5 (lower is better)
Translates to: QWHCPTTSSGLLWQW*WWWWWRLWPWWLWA
Trigger: AGCCCACAGCCACCATGGCCACAGCCGCCACCACCACCACCACCACCACTGCCACAGTAGCCCTGACGACGTCGTGGGACAATGCCACTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000215376.7
ENST00000382477.6
ENST00000589260.5
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS CCA 90 bp GTCCAGTGGCATTGTCCCACGACGTCGTCAGGGCTACTGTGGCAGTaGTGGTGGTGGTGGTGGTGGCGGCTGTGGCCATGGTGGCTGTGG +
Preference number: 5 (lower is better)
Translates to: VQWHCPTTSSGLLWQ*WWWWWWRLWPWWLW
Trigger: CCACAGCCACCATGGCCACAGCCGCCACCACCACCACCACCACCACTGCCACAGTAGCCCTGACGACGTCGTGGGACAATGCCACTGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000215376.7
ENST00000382477.6
ENST00000589260.5
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS CCA 90 bp AGGGGCGGCAGGTGCAGGTGCGTGAGCCGGGCATTCTTCAGGTGGTaGAAGTCCCCCTCCGTCAGTGTGTACCTGCGACAGCATCTGGCC +
Preference number: 5 (lower is better)
Translates to: RGGRCRCVSRAFFRW*KSPSVSVYLRQHLA
Trigger: GGCCAGATGCTGTCGCAGGTACACACTGACGGAGGGGGACTTCCACCACCTGAAGAATGCCCGGCTCACGCACCTGCACCTGCCGCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382477.6
CDS-3UTR CAA 90 bp GAACCCTTCAGGCCTCGGACTCCACCAGCAAGCAGCAGTACCAGCGCCATCCTCAACAGCGCCGCCTCATaGAAGGAGACCCGGCGGCCC +
Preference number: 5 (lower is better)
Translates to: EPFRPRTPPASSSTSAILNSAAS*KETRRP
Trigger: GGGCCGCCGGGTCTCCTTCAATGAGGCGGCGCTGTT...GAGGATGGCGCTGGTACTGCTGCTTGCTGGTGGAGTCCGAGGCCTGAAGGGTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR CAA 90 bp CCTTCCCCAGAGTCGCTAGATGCCGAGGGGCTGATCTCTGCGAAGTCAGTGGCGAACAGCGCCGCCTCATaGAAGGAGACCCGGCGGCCC +
Preference number: 5 (lower is better)
Translates to: PSPESLDAEGLISAKSVANSAAS*KETRRP
Trigger: GGGCCGCCGGGTCTCCTTCAATGAGGCGGCGCTGTT...CGCCACTGACTTCGCAGAGATCAGCCCCTCGGCATCTAGCGACTCTGGGGAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
CDS-3UTR CAA 90 bp GCGACTAAGCGGCCGCCCCGTCCGGGACTGAGGGCGAGTGATCGTTGTCCTCAGCCCTTGTCCTGCGTCTaGCGGCTCTGCTCAAACAGC +
Preference number: 5 (lower is better)
Translates to: ATKRPPRPGLRASDRCPQPLSCV*RLCSNS
Trigger: GCTGTTTGAGCAGAGCCGCAAGACGCAGGACAAGGG...CTGAGGACAACGATCACTCGCCCTCAGTCCCGGACGGGGCGGCCGCTTAGTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CAA 90 bp CTGGCATGGCGGCGCAGGCGGGTGAGGAACTGCAGAACGGTACCTGCCCCGGATTGGATGGTGACAATCTaGAGGGGCGGCAGGTGCAGG +
Preference number: 5 (lower is better)
Translates to: LAWRRRRVRNCRTVPAPDWMVTI*RGGRCR
Trigger: CCTGCACCTGCCGCCCCTCAAGATTGTCACCATCCA...ATCCGGGGCAGGTACCGTTCTGCAGTTCCTCACCCGCCTGCGCCGCCATGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
CDS CCA 90 bp CATTGTCCCACGACGTCGTCAGGGCTACTGTGGCAGTGGTGGTGGTaGTGGTGGTGGCGGCTGTGGCCATGGTGGCTGTGGGCTGCATTC +
Preference number: 5 (lower is better)
Translates to: HCPTTSSGLLWQWWW*WWWRLWPWWLWAAF
Trigger: GAATGCAGCCCACAGCCACCATGGCCACAGCCGCCACCACCACCACCACCACCACTGCCACAGTAGCCCTGACGACGTCGTGGGACAATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000215376.7
ENST00000382477.6
ENST00000589260.5
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CAA 90 bp TGTCCTCAGGAGCCCGAAGCTGAGAGCCGTTCACGCCCCTTCCTTCCCGCCCAGTGGATGGTGACAATCTaGAGGGGCGGCAGGTGCAGG +
Preference number: 5 (lower is better)
Translates to: CPQEPEAESRSRPFLPAQWMVTI*RGGRCR
Trigger: CCTGCACCTGCCGCCCCTCAAGATTGTCACCATCCA...CTGGGCGGGAAGGAAGGGGCGTGAACGGCTCTCAGCTTCGGGCTCCTGAGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CAA 90 bp GGAAAGAGTCTCTCGTCGAGGCCAGCCGCCAGCTTGTCCAGCACCGACCCGGATTGGAAGTGGTGCCGCTaGGGGGAACCTCTCGTGTCC +
Preference number: 5 (lower is better)
Translates to: GKSLSSRPAASLSSTDPDWKWCR*GEPLVS
Trigger: GGACACGAGAGGTTCCCCCAAGCGGCACCACTTCCA...ATCCGGGTCGGTGCTGGACAAGCTGGCGGCTGGCCTCGACGAGAGACTCTTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS CCA 90 bp TTGAGGGGCGGCAGGTGCAGGTGCGTGAGCCGGGCATTCTTCAGGTaGTGGAAGTCCCCCTCCGTCAGTGTGTACCTGCGACAGCATCTG +
Preference number: 5 (lower is better)
Translates to: LRGGRCRCVSRAFFR*WKSPSVSVYLRQHL
Trigger: CAGATGCTGTCGCAGGTACACACTGACGGAGGGGGACTTCCACCACCTGAAGAATGCCCGGCTCACGCACCTGCACCTGCCGCCCCTCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382477.6
CDS-3UTR CAA 90 bp CTGGCTGGGCTCCAGCTTCCACTTCTTGACCTTGAAATAGGGGCTGGCCCCATCAACAGCGCCGCCTCATaGAAGGAGACCCGGCGGCCC +
Preference number: 5 (lower is better)
Translates to: LAGLQLPLLDLEIGAGPINSAAS*KETRRP
Trigger: GGGCCGCCGGGTCTCCTTCAATGAGGCGGCGCTGTT...GATGGGGCCAGCCCCTATTTCAAGGTCAAGAAGTGGAAGCTGGAGCCCAGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
CDS-3UTR CAA 90 bp GCTTGGACCTGGCCGTCTGGGTTTTGTTCGCGTCTCAACGTGGATGGGGCGGCATGGAAGTGGTGCCGCTaGGGGGAACCTCTCGTGTCC +
Preference number: 5 (lower is better)
Translates to: AWTWPSGFCSRLNVDGAAWKWCR*GEPLVS
Trigger: GGACACGAGAGGTTCCCCCAAGCGGCACCACTTCCA...TGCCGCCCCATCCACGTTGAGACGCGAACAAAACCCAGACGGCCAGGTCCAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CAA 90 bp CATCCAGAAAAGAAAAACACGAGAAACGCCATCGCGGGATGGTGCAGACGCGGCCCACGCTGCCACTGTTaGCGGGCGTGCGGGTGCGCG +
Preference number: 5 (lower is better)
Translates to: HPEKKNTRNAIAGWCRRGPRCHC*RACGCA
Trigger: CGCGCACCCGCACGCCCGCAAACAGTGGCAGCGTGG...GCCGCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGTTTTTCTTTTCTGGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CAA 90 bp GCTGGGCTCCAGCTTCCACTTCTTGACCTTGAAATAGGGGCTGGCCCCATCCAGGAGCTGCGCCCAGTCTaGGGCTGGGTGGGTGCCGTT +
Preference number: 5 (lower is better)
Translates to: AGLQLPLLDLEIGAGPIQELRPV*GWVGAV
Trigger: AACGGCACCCACCCAGCCCAAGACTGGGCGCAGCTC...CTGGATGGGGCCAGCCCCTATTTCAAGGTCAAGAAGTGGAAGCTGGAGCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648750.1
CDS GCA 90 bp GAGATGAGTCGGAATCGAGCTGCGCCCAGTCTTGGGCTGGGTGGGTaGCGTTGTCCAGGTAGGTGGTGGTGGTCTTCTCCGCTTCCTCCA +
Preference number: 5 (lower is better)
Translates to: EMSRNRAAPSLGLGG*RCPGRWWWSSPLPP
Trigger: TGGAGGAAGCGGAGAAGACCACCACCACCTACCTGGACAACGGCACCCACCCAGCCCAAGACTGGGCGCAGCTCGATTCCGACTCATCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648750.1
CDS-3UTR CAA 90 bp CCAGAAAAGAAAAACACGAGAAACGCCATCGCGGGATGGTGCAGACGCGGCGGGTCCTCCATGGCCCTGTaGAGGCGCTGGTGGACGTCC +
Preference number: 5 (lower is better)
Translates to: PEKKNTRNAIAGWCRRGGSSMAL*RRWWTS
Trigger: GGACGTCCACCAGCGCCTCAACAGGGCCATGGAGGA...CCCGCCGCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGTTTTTCTTTTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CAA 90 bp CTCCAGCCTTGGTGCTCCTGGTACCGGCATCCAACGAGGTGCCTTCCCCAGAGTCTGGCCGTCTGGGTTTaGTTCGCGTCTCAACGTGGA +
Preference number: 5 (lower is better)
Translates to: LQPWCSWYRHPTRCLPQSLAVWV*FASQRG
Trigger: TCCACGTTGAGACGCGAACAAAACCCAGACGGCCAG...ACTCTGGGGAAGGCACCTCGTTGGATGCCGGTACCAGGAGCACCAAGGCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648750.1
CDS-3UTR CAA 90 bp GCTCAAGCGAGGCGCGCAGGCTCCACAGGTCGCGGTAGCTGGTCTGGGCCTGCTCGAGGCCGCCCAAATTaGGCAATAAATAAAGCTTGG +
Preference number: 5 (lower is better)
Translates to: AQARRAGSTGRGSWSGPARGRPN*AINKAW
Trigger: CCAAGCTTTATTTATTGCCAAATTTGGGCGGCCTCG...AGCAGGCCCAGACCAGCTACCGCGACCTGTGGAGCCTGCGCGCCTCGCTTGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590083.5
ENST00000648750.1
CDS-3UTR CAA 90 bp GGTGCCGCTTGGGGGAACCTCTCGTGTCCAGACTGGCTGCCCGCTGGCTGGGCTCGAGGCCGCCCAAATTaGGCAATAAATAAAGCTTGG +
Preference number: 5 (lower is better)
Translates to: GAAWGNLSCPDWLPAGWARGRPN*AINKAW
Trigger: CCAAGCTTTATTTATTGCCAAATTTGGGCGGCCTCG...AGCCCAGCCAGCGGGCAGCCAGTCTGGACACGAGAGGTTCCCCCAAGCGGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648750.1
CDS-3UTR CAA 90 bp TCATCCAGAAAAGAAAAACACGAGAAACGCCATCGCGGGATGGTGCAGACGCGGAACAGCGCCGCCTCATaGAAGGAGACCCGGCGGCCC +
Preference number: 5 (lower is better)
Translates to: SSRKEKHEKRHRGMVQTRNSAAS*KETRRP
Trigger: GGGCCGCCGGGTCTCCTTCAATGAGGCGGCGCTGTT...CCGCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGTTTTTCTTTTCTGGATGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CAA 90 bp GCTGGGCTCCAGCTTCCACTTCTTGACCTTGAAATAGGGGCTGGCCCCATCCAGTGGATGGTGACAATCTaGAGGGGCGGCAGGTGCAGG +
Preference number: 5 (lower is better)
Translates to: AGLQLPLLDLEIGAGPIQWMVTI*RGGRCR
Trigger: CCTGCACCTGCCGCCCCTCAAGATTGTCACCATCCA...CTGGATGGGGCCAGCCCCTATTTCAAGGTCAAGAAGTGGAAGCTGGAGCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000591127.1
ENST00000648750.1
CDS-3UTR CAA 90 bp TCATCCAGAAAAGAAAAACACGAGAAACGCCATCGCGGGATGGTGCAGACGCGGTCCTCCATGGCCCTGTaGAGGCGCTGGTGGACGTCC +
Preference number: 5 (lower is better)
Translates to: SSRKEKHEKRHRGMVQTRSSMAL*RRWWTS
Trigger: GGACGTCCACCAGCGCCTCAACAGGGCCATGGAGGA...CCGCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGTTTTTCTTTTCTGGATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CAA 90 bp TCATCCAGAAAAGAAAAACACGAGAAACGCCATCGCGGGATGGTGCAGACGCGGATGGACTGGACGCGGTaGAGTCCAGCTCAGCCCCTG +
Preference number: 5 (lower is better)
Translates to: SSRKEKHEKRHRGMVQTRMDWTR*SPAQPL
Trigger: CAGGGGCTGAGCTGGACTCAACCGCGTCCAGTCCAT...CCGCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGTTTTTCTTTTCTGGATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR CAA 90 bp AAAACACGAGAAACGCCATCGCGGGATGGTGCAGACGCGGCGGGGACTCGGAGGCGAGGCCGCCCAAATTaGGCAATAAATAAAGCTTGG +
Preference number: 5 (lower is better)
Translates to: KTRETPSRDGADAAGTRRRGRPN*AINKAW
Trigger: CCAAGCTTTATTTATTGCCAAATTTGGGCGGCCTCG...CCTCCGAGTCCCCGCCGCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CAA 90 bp TATCATCCAGAAAAGAAAAACACGAGAAACGCCATCGCGGGATGGTGCAGACGCTGGGCTTCAGGGAAGTaGCCCTTGGGTTGGGGGAGG +
Preference number: 5 (lower is better)
Translates to: YHPEKKNTRNAIAGWCRRWASGK*PLGWGR
Trigger: CCTCCCCCAACCCAAGGGCAACTTCCCTGAAGCCCA...GCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGTTTTTCTTTTCTGGATGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS-3UTR CAA 90 bp TCAATATTTATATCATCCAGAAAAGAAAAACACGAGAAACGCCATCGCGGGATGGTGGCGGCGCGGTTATaGCTCGGAGGCGGCGCGGGC +
Preference number: 5 (lower is better)
Translates to: SIFISSRKEKHEKRHRGMVAARL*LGGGAG
Trigger: GCCCGCGCCGCCTCCGAGCAATAACCGCGCCGCCAC...CATCCCGCGATGGCGTTTCTCGTGTTTTTCTTTTCTGGATGATATAAATATTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS-3UTR CAA 90 bp TCAATATTTATATCATCCAGAAAAGAAAAACACGAGAAACGCCATCGCGGGATGATGAGCCAGTGTGTTTaGCAGGGGATGCGTCTTGCA +
Preference number: 5 (lower is better)
Translates to: SIFISSRKEKHEKRHRGMMSQCV*QGMRLA
Trigger: TGCAAGACGCATCCCCTGCAAAACACACTGGCTCAT...CATCCCGCGATGGCGTTTCTCGTGTTTTTCTTTTCTGGATGATATAAATATTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590083.5
CDS TCA 72 bp CGGCGCCCGGTGGCCGCGGAGCAGGCGGAGAATTTATaGATGGAGAGCGCGGCGCGGGGGAGGCCGGCGCGA +
Preference number: 6 (lower is better)
Translates to: RRPVAAEQAENL*MESAARGRPAR
Trigger: TCGCGCCGGCCTCCCCCGCGCCGCGCTCTCCATTCATAAATTCTCCGCCTGCTCCGCGGCCACCGGGCGCCG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382477.6
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS CCA 72 bp GCTGTGGCCATGGTGGCTGTGGGCTGCATTCTGAACTaGGGAGGAGGGCCCTCAGCGCCGGGACGAGCGGCC +
Preference number: 6 (lower is better)
Translates to: AVAMVAVGCILN*GGGPSAPGRAA
Trigger: GGCCGCTCGTCCCGGCGCTGAGGGCCCTCCTCCCCAGTTCAGAATGCAGCCCACAGCCACCATGGCCACAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000215376.7
ENST00000382477.6
ENST00000589260.5
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS GCA 72 bp CCACCTCCCATGCCCGATGCCCCAGCTGCCGTGCTCTaGCATCCACCCTGCCGGCCCTTGTCCTGCGTCTTG +
Preference number: 6 (lower is better)
Translates to: PPPMPDAPAAVL*HPPCRPLSCVL
Trigger: CAAGACGCAGGACAAGGGCCGGCAGGGTGGATGGCAGAGCACGGCAGCTGGGGCATCGGGCATGGGAGGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382477.6
CDS CCA 72 bp GCTCAGCACGCGCCTGGGCCCACCTACGCCTTGGGCTaGGTGGGTGCCGTTGTCCAGGTAGGTGGTGGTGGT +
Preference number: 6 (lower is better)
Translates to: AQHAPGPTYALG*VGAVVQVGGGG
Trigger: ACCACCACCACCTACCTGGACAACGGCACCCACCCAGCCCAAGGCGTAGGTGGGCCCAGGCGCGTGCTGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215376.7
ENST00000589260.5
CDS TCA 72 bp GGGGCTGATCTCTGCGAAGTCAGTGGCGCCCGCGGCTaGGTTGTAGGGGTCACCTGGCAGGGCGGAGCTGGA +
Preference number: 6 (lower is better)
Translates to: GADLCEVSGARG*VVGVTWQGGAG
Trigger: TCCAGCTCCGCCCTGCCAGGTGACCCCTACAACTCAGCCGCGGGCGCCACTGACTTCGCAGAGATCAGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591127.1
CDS CCA 72 bp CCCACGACGTCGTCAGGGCTACTGTGGCAGTGGTGGTaGTGGTGGTGGTGGCGGCTGTGGCCATGGTGGCTG +
Preference number: 6 (lower is better)
Translates to: PTTSSGLLWQWW*WWWWRLWPWWL
Trigger: CAGCCACCATGGCCACAGCCGCCACCACCACCACCACCACCACTGCCACAGTAGCCCTGACGACGTCGTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000215376.7
ENST00000382477.6
ENST00000589260.5
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS GCA 72 bp CCTCTCCCCGGAAGTCGGGGTCTTGGGCTGGGTGGGTaGCGTTGTCCAGGTAGGTGGTGGTGGTCTTCTCCG +
Preference number: 6 (lower is better)
Translates to: PLPGSRGLGLGG*RCPGRWWWSSP
Trigger: CGGAGAAGACCACCACCACCTACCTGGACAACGGCACCCACCCAGCCCAAGACCCCGACTTCCGGGGAGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382477.6
ENST00000590083.5
ENST00000650044.1
CDS GCA 72 bp CCACCCTGCCGGCCCTTGTCCTGCGTCTTGCGGCTCTaGTCAAACAGCGCCGCCTCATTGAAGGAGACCCGG +
Preference number: 6 (lower is better)
Translates to: PPCRPLSCVLRL*SNSAASLKETR
Trigger: CCGGGTCTCCTTCAATGAGGCGGCGCTGTTTGAGCAGAGCCGCAAGACGCAGGACAAGGGCCGGCAGGGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382477.6
CDS CCA 72 bp ACGACGTCGTCAGGGCTACTGTGGCAGTGGTGGTGGTaGTGGTGGTGGCGGCTGTGGCCATGGTGGCTGTGG +
Preference number: 6 (lower is better)
Translates to: TTSSGLLWQWWW*WWWRLWPWWLW
Trigger: CCACAGCCACCATGGCCACAGCCGCCACCACCACCACCACCACCACTGCCACAGTAGCCCTGACGACGTCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000215376.7
ENST00000382477.6
ENST00000589260.5
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS CCA 72 bp TGTCCCACGACGTCGTCAGGGCTACTGTGGCAGTGGTaGTGGTGGTGGTGGTGGCGGCTGTGGCCATGGTGG +
Preference number: 6 (lower is better)
Translates to: CPTTSSGLLWQW*WWWWWRLWPWW
Trigger: CCACCATGGCCACAGCCGCCACCACCACCACCACCACCACTGCCACAGTAGCCCTGACGACGTCGTGGGACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000215376.7
ENST00000382477.6
ENST00000589260.5
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS CAA 72 bp GCCCTGTTGAGGCGCTGGTGGACGTCCCAGCAGCGCTaGCAGAGGAGCAGGACGCCAGACAACACCACCAGC +
Preference number: 6 (lower is better)
Translates to: ALLRRWWTSQQR*QRSRTPDNTTS
Trigger: GCTGGTGGTGTTGTCTGGCGTCCTGCTCCTCTGCAAGCGCTGCTGGGACGTCCACCAGCGCCTCAACAGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000215376.7
ENST00000382477.6
ENST00000589260.5
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS GCA 72 bp CGGAATCGAGCTGCGCCCAGTCTTGGGCTGGGTGGGTaGCGTTGTCCAGGTAGGTGGTGGTGGTCTTCTCCG +
Preference number: 6 (lower is better)
Translates to: RNRAAPSLGLGG*RCPGRWWWSSP
Trigger: CGGAGAAGACCACCACCACCTACCTGGACAACGGCACCCACCCAGCCCAAGACTGGGCGCAGCTCGATTCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648750.1
CDS CCA 72 bp CAGTGGCATTGTCCCACGACGTCGTCAGGGCTACTGTaGCAGTGGTGGTGGTGGTGGTGGTGGCGGCTGTGG +
Preference number: 6 (lower is better)
Translates to: QWHCPTTSSGLL*QWWWWWWWRLW
Trigger: CCACAGCCGCCACCACCACCACCACCACCACTGCCACAGTAGCCCTGACGACGTCGTGGGACAATGCCACTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000215376.7
ENST00000382477.6
ENST00000589260.5
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS CCA 72 bp TTCTCCGCTTCCTCCATGGCCCTGTTGAGGCGCTGGTaGACGTCCCAGCAGCGCTTGCAGAGGAGCAGGACG +
Preference number: 6 (lower is better)
Translates to: FSASSMALLRRW*TSQQRLQRSRT
Trigger: CGTCCTGCTCCTCTGCAAGCGCTGCTGGGACGTCCACCAGCGCCTCAACAGGGCCATGGAGGAAGCGGAGAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000215376.7
ENST00000382477.6
ENST00000589260.5
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS CCA 72 bp AGTCCCCCTCCGTCAGTGTGTACCTGCGACAGCATCTaGCCATCAGAGCCCGCCCACCTCCCATGCCCGATG +
Preference number: 6 (lower is better)
Translates to: SPPPSVCTCDSI*PSEPAHLPCPM
Trigger: CATCGGGCATGGGAGGTGGGCGGGCTCTGATGGCCAGATGCTGTCGCAGGTACACACTGACGGAGGGGGACT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382477.6
CDS CAA 72 bp ATGGGGTCTGGCTCTGCCGTGGGGCGTCCAGTGGCATaGTCCCACGACGTCGTCAGGGCTACTGTGGCAGTG +
Preference number: 6 (lower is better)
Translates to: MGSGSAVGRPVA*SHDVVRATVAV
Trigger: CACTGCCACAGTAGCCCTGACGACGTCGTGGGACAATGCCACTGGACGCCCCACGGCAGAGCCAGACCCCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000215376.7
ENST00000382477.6
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS CAA 72 bp CAGGATGGGGTCTGGCTCGTGGGGCGTCCAGTGGCATaGTCCCACGACGTCGTCAGGGCTACTGTGGCAGTG +
Preference number: 6 (lower is better)
Translates to: QDGVWLVGRPVA*SHDVVRATVAV
Trigger: CACTGCCACAGTAGCCCTGACGACGTCGTGGGACAATGCCACTGGACGCCCCACGAGCCAGACCCCATCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589260.5
CDS CCA 72 bp GGCAGGTGCAGGTGCGTGAGCCGGGCATTCTTCAGGTaGTGGAAGTCCCCCTCCGTCAGTGTGTACCTGCGA +
Preference number: 6 (lower is better)
Translates to: GRCRCVSRAFFR*WKSPSVSVYLR
Trigger: TCGCAGGTACACACTGACGGAGGGGGACTTCCACCACCTGAAGAATGCCCGGCTCACGCACCTGCACCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382477.6
CDS CCA 72 bp TTGTCCAGGATGGGGTCTGGCTCGTGGGGCGTCCAGTaGCATTGTCCCACGACGTCGTCAGGGCTACTGTGG +
Preference number: 6 (lower is better)
Translates to: LSRMGSGSWGVQ*HCPTTSSGLLW
Trigger: CCACAGTAGCCCTGACGACGTCGTGGGACAATGCCACTGGACGCCCCACGAGCCAGACCCCATCCTGGACAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589260.5
CDS CAA 72 bp CTCTGCCATCCACCCTGCCGGCCCTTGTCCTGCGTCTaGCGGCTCTGCTCAAACAGCGCCGCCTCATTGAAG +
Preference number: 6 (lower is better)
Translates to: LCHPPCRPLSCV*RLCSNSAASLK
Trigger: CTTCAATGAGGCGGCGCTGTTTGAGCAGAGCCGCAAGACGCAGGACAAGGGCCGGCAGGGTGGATGGCAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382477.6
CDS CCA 72 bp ACATCACCACCACCAGCAGCACGTAGTTGTCCAGGATaGGGTCTGGCTCTGCCGTGGGGCGTCCAGTGGCAT +
Preference number: 6 (lower is better)
Translates to: TSPPPAARSCPG*GLALPWGVQWH
Trigger: ATGCCACTGGACGCCCCACGGCAGAGCCAGACCCCATCCTGGACAACTACGTGCTGCTGGTGGTGGTGATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000215376.7
ENST00000382477.6
ENST00000590083.5
ENST00000648750.1
ENST00000650044.1
CDS CCA 72 bp AGGTGCAGGTGCGTGAGCCGGGCATTCTTCAGGTGGTaGAAGTCCCCCTCCGTCAGTGTGTACCTGCGACAG +
Preference number: 6 (lower is better)
Translates to: RCRCVSRAFFRW*KSPSVSVYLRQ
Trigger: CTGTCGCAGGTACACACTGACGGAGGGGGACTTCCACCACCTGAAGAATGCCCGGCTCACGCACCTGCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382477.6
CDS CCA 72 bp ACATCACCACCACCAGCAGCACGTAGTTGTCCAGGATaGGGTCTGGCTCGTGGGGCGTCCAGTGGCATTGTC +
Preference number: 6 (lower is better)
Translates to: TSPPPAARSCPG*GLARGASSGIV
Trigger: GACAATGCCACTGGACGCCCCACGAGCCAGACCCCATCCTGGACAACTACGTGCTGCTGGTGGTGGTGATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589260.5