Pregenerated sensors for CATSPER3 (Homo sapiens)
Ensembl gene IDs: ENSG00000152705Ensembl transcript IDs: ENST00000282611.8, ENST00000511235.1
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GTGTTTAATAGGGACCTGTCATGGTCTGCAAGGCTCTCGGCACATGGGTGCCCCTCTGCCCCACGGCGGTaGTCAGCGTCCGGATGCCCT | + |
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Preference number: 4 (lower is better) Translates to: VFNRDLSWSARLSAHGCPSAPRR*SASGCP Trigger: AGGGCATCCGGACGCTGATCACCGCCGTGGGGCAGA...GGGGCACCCATGTGCCGAGAGCCTTGCAGACCATGACAGGTCCCTATTAAACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000282611.8 |
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| CDS-3UTR GCA 90 bp | AATAGGGACCTGTCATGGTCTGCAAGGCTCTCGGCACATGGGTGCCCCATGCCCCTCTCGGCACATGGGTaGCCCATGCCCAGCTACTTC | + |
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Preference number: 4 (lower is better) Translates to: NRDLSWSARLSAHGCPMPLSAHG*PMPSYF Trigger: GAAGTAGCTGGGCATGGGGCACCCATGTGCCGAGAG...GGGCATGGGGCACCCATGTGCCGAGAGCCTTGCAGACCATGACAGGTCCCTATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000282611.8 |
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| CDS-3UTR CCA 90 bp | AATAGGGACCTGTCATGGTCTGCAAGGCTCTCGGCACATGGGTGCCCCATGCCCAAGGCTCTCGGCACATaGGTGCCCCATGCCCAGCTA | + |
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Preference number: 4 (lower is better) Translates to: NRDLSWSARLSAHGCPMPKALGT*VPHAQL Trigger: TAGCTGGGCATGGGGCACCCATGTGCCGAGAGCCTT...GGGCATGGGGCACCCATGTGCCGAGAGCCTTGCAGACCATGACAGGTCCCTATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000282611.8 |
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| CDS-3UTR GCA 90 bp | AATAGGGACCTGTCATGGTCTGCAAGGCTCTCGGCACATGGGTGCCCCATGCCCCTGATCTCCTCCTGCTaGCGCTGCAGAATCACCTGC | + |
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Preference number: 4 (lower is better) Translates to: NRDLSWSARLSAHGCPMPLISSC*RCRITC Trigger: GCAGGTGATTCTGCAGCGGCAGCAGGAGGAGATCAG...GGGCATGGGGCACCCATGTGCCGAGAGCCTTGCAGACCATGACAGGTCCCTATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000282611.8 |
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| CDS-3UTR GCA 90 bp | AATAGGGACCTGTCATGGTCTGCAAGGCTCTCGGCACATGGGTGCCCCATGCCCCCCATGAGCATCTCCTaGTGCTCCAACATCAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: NRDLSWSARLSAHGCPMPPMSIS*CSNISS Trigger: AGAGCTGATGTTGGAGCAGCAGGAGATGCTCATGGG...GGGCATGGGGCACCCATGTGCCGAGAGCCTTGCAGACCATGACAGGTCCCTATT 58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000282611.8 |
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| CDS-3UTR TCA 90 bp | AATAGGGACCTGTCATGGTCTGCAAGGCTCTCGGCACATGGGTGCCCCATGCCCAGTCCTCTGTGTGCATaGTCATCACACCCACGAACA | + |
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Preference number: 4 (lower is better) Translates to: NRDLSWSARLSAHGCPMPSPLCA*SSHPRT Trigger: TGTTCGTGGGTGTGATGATCATGCACACAGAGGACT...GGGCATGGGGCACCCATGTGCCGAGAGCCTTGCAGACCATGACAGGTCCCTATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000282611.8 |
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| CDS-3UTR TCA 90 bp | AGCCTGTGTTTAATAGGGACCTGTCATGGTCTGCAAGGCTCTCGGCACATGGGTTGTGCATCAGCCTGCTaGTCTCCTCCTGCTGCCGCT | + |
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Preference number: 4 (lower is better) Translates to: SLCLIGTCHGLQGSRHMGCASAC*SPPAAA Trigger: AGCGGCAGCAGGAGGAGATCAGCAGGCTGATGCACA...ACCCATGTGCCGAGAGCCTTGCAGACCATGACAGGTCCCTATTAAACACAGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000282611.8 |
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| CDS-3UTR GCA 90 bp | CCTGTGTTTAATAGGGACCTGTCATGGTCTGCAAGGCTCTCGGCACATGGGTGCGGACCTGTCATGGTCTaGAAGGCTCTCGGCACATGG | + |
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Preference number: 4 (lower is better) Translates to: PVFNRDLSWSARLSAHGCGPVMV*KALGTW Trigger: CCATGTGCCGAGAGCCTTGCAGACCATGACAGGTCC...GCACCCATGTGCCGAGAGCCTTGCAGACCATGACAGGTCCCTATTAAACACAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000282611.8 |
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| CDS-3UTR GCA 90 bp | GTGTTTAATAGGGACCTGTCATGGTCTGCAAGGCTCTCGGCACATGGGTGCCCCATGAGCATCTCCTGCTaGTCCAACATCAGCTCTCGC | + |
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Preference number: 4 (lower is better) Translates to: VFNRDLSWSARLSAHGCPMSISC*SNISSR Trigger: GCGAGAGCTGATGTTGGAGCAGCAGGAGATGCTCAT...GGGGCACCCATGTGCCGAGAGCCTTGCAGACCATGACAGGTCCCTATTAAACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000282611.8 |
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| CDS-3UTR GCA 90 bp | CCTGTGTTTAATAGGGACCTGTCATGGTCTGCAAGGCTCTCGGCACATGGGTGCTCCTCCTGCTGCCGCTaGAGAATCACCTGCTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: PVFNRDLSWSARLSAHGCSSCCR*RITCFS Trigger: AGAGAAGCAGGTGATTCTGCAGCGGCAGCAGGAGGA...GCACCCATGTGCCGAGAGCCTTGCAGACCATGACAGGTCCCTATTAAACACAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000282611.8 |
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| CDS-3UTR GCA 90 bp | ATAGGGACCTGTCATGGTCTGCAAGGCTCTCGGCACATGGGTGCCCCATGCCCAGCATTTTTCTGTATGTaGATCAGCCTGCTGATCTCC | + |
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Preference number: 4 (lower is better) Translates to: IGTCHGLQGSRHMGAPCPAFFCM*ISLLIS Trigger: GGAGATCAGCAGGCTGATGCACATACAGAAAAATGC...TGGGCATGGGGCACCCATGTGCCGAGAGCCTTGCAGACCATGACAGGTCCCTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000282611.8 |
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| CDS-3UTR CCA 90 bp | CCTGTGTTTAATAGGGACCTGTCATGGTCTGCAAGGCTCTCGGCACATGGGTGCAATAGGGACCTGTCATaGTCTGCAAGGCTCTCGGCA | + |
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Preference number: 4 (lower is better) Translates to: PVFNRDLSWSARLSAHGCNRDLS*SARLSA Trigger: TGCCGAGAGCCTTGCAGACCATGACAGGTCCCTATT...GCACCCATGTGCCGAGAGCCTTGCAGACCATGACAGGTCCCTATTAAACACAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000282611.8 |
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| CDS-3UTR GCA 90 bp | CTGTGTTTAATAGGGACCTGTCATGGTCTGCAAGGCTCTCGGCACATGGGTGCCTTGTCCAACTGCTTCTaGAGGTCTGTCCAGCCATCA | + |
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Preference number: 4 (lower is better) Translates to: LCLIGTCHGLQGSRHMGALSNCF*RSVQPS Trigger: TGATGGCTGGACAGACCTGCAGAAGCAGTTGGACAA...GGCACCCATGTGCCGAGAGCCTTGCAGACCATGACAGGTCCCTATTAAACACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000282611.8 |
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| CDS-3UTR GCA 90 bp | GAAAGCCTGTGTTTAATAGGGACCTGTCATGGTCTGCAAGGCTCTCGGCACATGTCCCGATTGTCCAACTaGTTCTGCAGGTCTGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: ESLCLIGTCHGLQGSRHMSRLSN*FCRSVQ Trigger: CTGGACAGACCTGCAGAAGCAGTTGGACAATCGGGA...CATGTGCCGAGAGCCTTGCAGACCATGACAGGTCCCTATTAAACACAGGCTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000282611.8 |
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| CDS-3UTR GCA 90 bp | AGAAAGCCTGTGTTTAATAGGGACCTGTCATGGTCTGCAAGGCTCTCGGCACATCACATGGGTGCCCCATaGCCAGCTACTTCTCATCCA | + |
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Preference number: 4 (lower is better) Translates to: RKPVFNRDLSWSARLSAHHMGAP*PATSHP Trigger: TGGATGAGAAGTAGCTGGGCATGGGGCACCCATGTG...ATGTGCCGAGAGCCTTGCAGACCATGACAGGTCCCTATTAAACACAGGCTTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000282611.8 |
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| CDS-3UTR CCA 90 bp | TTAATAGGGACCTGTCATGGTCTGCAAGGCTCTCGGCACATGGGTGCCCCATGCATGGTCACCATTGTCTaGAGATCCAAACAGGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: LIGTCHGLQGSRHMGAPCMVTIV*RSKQAE Trigger: TTCTGCCTGTTTGGATCTCCAGACAATGGTGACCAT...GCATGGGGCACCCATGTGCCGAGAGCCTTGCAGACCATGACAGGTCCCTATTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000282611.8 |
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| CDS-3UTR GCA 90 bp | GAAAGCCTGTGTTTAATAGGGACCTGTCATGGTCTGCAAGGCTCTCGGCACATGATGGAGTCCTCTGTGTaGATGATCATCACACCCACG | + |
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Preference number: 4 (lower is better) Translates to: ESLCLIGTCHGLQGSRHMMESSV*MIITPT Trigger: CGTGGGTGTGATGATCATGCACACAGAGGACTCCAT...CATGTGCCGAGAGCCTTGCAGACCATGACAGGTCCCTATTAAACACAGGCTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000282611.8 |
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| CDS-3UTR CCA 90 bp | CTGTGTTTAATAGGGACCTGTCATGGTCTGCAAGGCTCTCGGCACATGGGTGCCACTCAGATGTGCAGATaGACACAAAGAAGATCTCCG | + |
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Preference number: 4 (lower is better) Translates to: LCLIGTCHGLQGSRHMGATQMCR*TQRRSP Trigger: CGGAGATCTTCTTTGTGTCCATCTGCACATCTGAGT...GGCACCCATGTGCCGAGAGCCTTGCAGACCATGACAGGTCCCTATTAAACACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000282611.8 |
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| CDS-3UTR CCA 90 bp | CCTGTGTTTAATAGGGACCTGTCATGGTCTGCAAGGCTCTCGGCACATGGGTGCACCATTGGGTCAGTGTaGCTCAAGGTCTTCTTAAAG | + |
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Preference number: 4 (lower is better) Translates to: PVFNRDLSWSARLSAHGCTIGSV*LKVFLK Trigger: CTTTAAGAAGACCTTGAGCCACACTGACCCAATGGT...GCACCCATGTGCCGAGAGCCTTGCAGACCATGACAGGTCCCTATTAAACACAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000282611.8 |
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| CDS-3UTR CCA 90 bp | AAGCCTGTGTTTAATAGGGACCTGTCATGGTCTGCAAGGCTCTCGGCACATGGGCCACATAGACCTTCATaGACAACTCAGATGTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: KPVFNRDLSWSARLSAHGPHRPS*TTQMCR Trigger: TCTGCACATCTGAGTTGTCCATGAAGGTCTATGTGG...CCCATGTGCCGAGAGCCTTGCAGACCATGACAGGTCCCTATTAAACACAGGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000282611.8 |
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| CDS-3UTR CCA 90 bp | TCAGAAAGCCTGTGTTTAATAGGGACCTGTCATGGTCTGCAAGGCTCTCGGCACATCATCCAAGACCATTaGGTCAGTGTGGCTCAAGGT | + |
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Preference number: 4 (lower is better) Translates to: SESLCLIGTCHGLQGSRHIIQDH*VSVAQG Trigger: ACCTTGAGCCACACTGACCCAATGGTCTTGGATGAT...GTGCCGAGAGCCTTGCAGACCATGACAGGTCCCTATTAAACACAGGCTTTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000282611.8 |
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| CDS-3UTR CCA 90 bp | GAAAGCCTGTGTTTAATAGGGACCTGTCATGGTCTGCAAGGCTCTCGGCACATGTTCCCCCAGTTATCATaGTCACCATTGTCTGGAGAT | + |
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Preference number: 4 (lower is better) Translates to: ESLCLIGTCHGLQGSRHMFPQLS*SPLSGD Trigger: ATCTCCAGACAATGGTGACCATGATAACTGGGGGAA...CATGTGCCGAGAGCCTTGCAGACCATGACAGGTCCCTATTAAACACAGGCTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000282611.8 |
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| CDS-3UTR CAA 90 bp | ATAGGGACCTGTCATGGTCTGCAAGGCTCTCGGCACATGGGTGCCCCATGCCCAAATCATCCAAGACCATaGGGTCAGTGTGGCTCAAGG | + |
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Preference number: 5 (lower is better) Translates to: IGTCHGLQGSRHMGAPCPNHPRP*GQCGSR Trigger: CCTTGAGCCACACTGACCCAATGGTCTTGGATGATT...TGGGCATGGGGCACCCATGTGCCGAGAGCCTTGCAGACCATGACAGGTCCCTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000282611.8 |
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| CDS GCA 90 bp | GTGAATGCCCGGCTCAAAGCAAATTCCCGATTGTCCAACTGCTTCTaGAGGTCTGTCCAGCCATCAACCGTGGCCAAGCTGAAGAGGGTG | + |
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Preference number: 5 (lower is better) Translates to: VNARLKANSRLSNCF*RSVQPSTVAKLKRV Trigger: CACCCTCTTCAGCTTGGCCACGGTTGATGGCTGGACAGACCTGCAGAAGCAGTTGGACAATCGGGAATTTGCTTTGAGCCGGGCATTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000282611.8 |
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| CDS-3UTR CAA 90 bp | TGTTTAATAGGGACCTGTCATGGTCTGCAAGGCTCTCGGCACATGGGTGCCCCAGAAGCTTGTGGACAGTaGTGTCCTGGTAGTCCAGAG | + |
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Preference number: 5 (lower is better) Translates to: CLIGTCHGLQGSRHMGAPEACGQ*CPGSPE Trigger: CTCTGGACTACCAGGACACAACTGTCCACAAGCTTC...TGGGGCACCCATGTGCCGAGAGCCTTGCAGACCATGACAGGTCCCTATTAAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000282611.8 |
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| CDS GCA 90 bp | ATGATGGTGAATGCCCGGCTCAAAGCAAATTCCCGATTGTCCAACTaGTTCTGCAGGTCTGTCCAGCCATCAACCGTGGCCAAGCTGAAG | + |
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Preference number: 5 (lower is better) Translates to: MMVNARLKANSRLSN*FCRSVQPSTVAKLK Trigger: CTTCAGCTTGGCCACGGTTGATGGCTGGACAGACCTGCAGAAGCAGTTGGACAATCGGGAATTTGCTTTGAGCCGGGCATTCACCATCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000282611.8 |
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| CDS GCA 90 bp | TCAGCATTTTTCTGTATGTGCATCAGCCTGCTGATCTCCTCCTGCTaGCGCTGCAGAATCACCTGCTTCTCTCCCATGAGCATCTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: SAFFCMCISLLISSC*RCRITCFSPMSISC Trigger: GCAGGAGATGCTCATGGGAGAGAAGCAGGTGATTCTGCAGCGGCAGCAGGAGGAGATCAGCAGGCTGATGCACATACAGAAAAATGCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000282611.8 |
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| CDS GCA 90 bp | CAGTCAGCATTTTTCTGTATGTGCATCAGCCTGCTGATCTCCTCCTaGTGCCGCTGCAGAATCACCTGCTTCTCTCCCATGAGCATCTCC | + |
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Preference number: 5 (lower is better) Translates to: QSAFFCMCISLLISS*CRCRITCFSPMSIS Trigger: GGAGATGCTCATGGGAGAGAAGCAGGTGATTCTGCAGCGGCAGCAGGAGGAGATCAGCAGGCTGATGCACATACAGAAAAATGCTGACTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000282611.8 |
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| CDS-3UTR CAA 90 bp | TGTTTAATAGGGACCTGTCATGGTCTGCAAGGCTCTCGGCACATGGGTGCCCCAACACCCACGAACATGTaGAGGAAGATGAAAGAGGCG | + |
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Preference number: 5 (lower is better) Translates to: CLIGTCHGLQGSRHMGAPTPTNM*RKMKEA Trigger: CGCCTCTTTCATCTTCCTCAACATGTTCGTGGGTGT...TGGGGCACCCATGTGCCGAGAGCCTTGCAGACCATGACAGGTCCCTATTAAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000282611.8 |
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| CDS-3UTR CAA 90 bp | AAGCCTGTGTTTAATAGGGACCTGTCATGGTCTGCAAGGCTCTCGGCACATGGGAAAGCAAATTCCCGATaGTCCAACTGCTTCTGCAGG | + |
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Preference number: 5 (lower is better) Translates to: KPVFNRDLSWSARLSAHGKANSR*SNCFCR Trigger: CCTGCAGAAGCAGTTGGACAATCGGGAATTTGCTTT...CCCATGTGCCGAGAGCCTTGCAGACCATGACAGGTCCCTATTAAACACAGGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000282611.8 |
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| CDS-3UTR CAA 90 bp | AAGCCTGTGTTTAATAGGGACCTGTCATGGTCTGCAAGGCTCTCGGCACATGGGCTCATAGTACAGCTCTaGAAGCTTGTGGACAGTTGT | + |
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Preference number: 5 (lower is better) Translates to: KPVFNRDLSWSARLSAHGLIVQL*KLVDSC Trigger: ACAACTGTCCACAAGCTTCAAGAGCTGTACTATGAG...CCCATGTGCCGAGAGCCTTGCAGACCATGACAGGTCCCTATTAAACACAGGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000282611.8 |
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| CDS GCA 90 bp | GTTGAGGAAGATGAAAGAGGCGAGCAAGATGAAGATGATGGTGAATaGCCGGCTCAAAGCAAATTCCCGATTGTCCAACTGCTTCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: VEEDERGEQDEDDGE*PAQSKFPIVQLLLQ Trigger: CTGCAGAAGCAGTTGGACAATCGGGAATTTGCTTTGAGCCGGGCATTCACCATCATCTTCATCTTGCTCGCCTCTTTCATCTTCCTCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000282611.8 |
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| CDS-3UTR CAA 90 bp | GAAAGCCTGTGTTTAATAGGGACCTGTCATGGTCTGCAAGGCTCTCGGCACATGTTATCATGGTCACCATaGTCTGGAGATCCAAACAGG | + |
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Preference number: 5 (lower is better) Translates to: ESLCLIGTCHGLQGSRHMLSWSP*SGDPNR Trigger: CCTGTTTGGATCTCCAGACAATGGTGACCATGATAA...CATGTGCCGAGAGCCTTGCAGACCATGACAGGTCCCTATTAAACACAGGCTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000282611.8 |
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| CDS TCA 90 bp | CTTGACTATCATGCAAATCCATTCATTCACTGGAAGAGCTGTGACTaGGCACCCACCCTCAAGAAGTCTGAACAAGCGGTACCTTATGTC | + |
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Preference number: 5 (lower is better) Translates to: LDYHANPFIHWKSCD*APTLKKSEQAVPYV Trigger: GACATAAGGTACCGCTTGTTCAGACTTCTTGAGGGTGGGTGCTCAGTCACAGCTCTTCCAGTGAATGAATGGATTTGCATGATAGTCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511235.1 |
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| CDS CCA 90 bp | AAGGGTAAGCTAGTGCCAAAATCATCCAAGACCATTGGGTCAGTGTaGCTCAAGGTCTTCTTAAAGTTCTCCACCAGCTCACTGAAACTT | + |
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Preference number: 5 (lower is better) Translates to: KGKLVPKSSKTIGSV*LKVFLKFSTSSLKL Trigger: AAGTTTCAGTGAGCTGGTGGAGAACTTTAAGAAGACCTTGAGCCACACTGACCCAATGGTCTTGGATGATTTTGGCACTAGCTTACCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000282611.8 |
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| CDS GCA 90 bp | CATAATTATCTTAAAGAAACGGCTCATTATGACTCTCTTCACAAATaGCCGACATTCATCATCGTTCCTCTTAAATTTCTTGAATGTTGG | + |
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Preference number: 5 (lower is better) Translates to: HNYLKETAHYDSLHK*PTFIIVPLKFLECW Trigger: CCAACATTCAAGAAATTTAAGAGGAACGATGATGAATGTCGGGCATTTGTGAAGAGAGTCATAATGAGCCGTTTCTTTAAGATAATTATG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000282611.8 ENST00000511235.1 |
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| CDS GCA 72 bp | CATGGTCTGCAAGGCTCTCGGCACATGGGTGCCCCATaGCCAGCTACTTCTCATCCACCTTTTCCAAGGACT | + |
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Preference number: 6 (lower is better) Translates to: HGLQGSRHMGAP*PATSHPPFPRT Trigger: AGTCCTTGGAAAAGGTGGATGAGAAGTAGCTGGGCATGGGGCACCCATGTGCCGAGAGCCTTGCAGACCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000282611.8 |
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| CDS GCA 72 bp | CGGCTCAAAGCAAATTCCCGATTGTCCAACTGCTTCTaGAGGTCTGTCCAGCCATCAACCGTGGCCAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: RLKANSRLSNCF*RSVQPSTVAKL Trigger: CAGCTTGGCCACGGTTGATGGCTGGACAGACCTGCAGAAGCAGTTGGACAATCGGGAATTTGCTTTGAGCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000282611.8 |
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| CDS GCA 72 bp | AATGCCCGGCTCAAAGCAAATTCCCGATTGTCCAACTaGTTCTGCAGGTCTGTCCAGCCATCAACCGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: NARLKANSRLSN*FCRSVQPSTVA Trigger: GGCCACGGTTGATGGCTGGACAGACCTGCAGAAGCAGTTGGACAATCGGGAATTTGCTTTGAGCCGGGCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000282611.8 |
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| CDS CAA 72 bp | GCTGCAGCCAGGTTCCCCCAGTTATCATGGTCACCATaGTCTGGAGATCCAAACAGGCAGAAGCCCAAGATA | + |
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Preference number: 6 (lower is better) Translates to: AAARFPQLSWSP*SGDPNRQKPKI Trigger: TATCTTGGGCTTCTGCCTGTTTGGATCTCCAGACAATGGTGACCATGATAACTGGGGGAACCTGGCTGCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000282611.8 |
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| CDS CAA 90 bp | AAGATGAAGATGATGGTGAATGCCCGGCTCAAAGCAAATTCCCGATaGTCCAACTGCTTCTGCAGGTCTGTCCAGCCATCAACCGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: KMKMMVNARLKANSR*SNCFCRSVQPSTVA Trigger: GGCCACGGTTGATGGCTGGACAGACCTGCAGAAGCAGTTGGACAATCGGGAATTTGCTTTGAGCCGGGCATTCACCATCATCTTCATCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000282611.8 |
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| CDS CAA 72 bp | ATGATGGTGAATGCCCGGCTCAAAGCAAATTCCCGATaGTCCAACTGCTTCTGCAGGTCTGTCCAGCCATCA | + |
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Preference number: 6 (lower is better) Translates to: MMVNARLKANSR*SNCFCRSVQPS Trigger: TGATGGCTGGACAGACCTGCAGAAGCAGTTGGACAATCGGGAATTTGCTTTGAGCCGGGCATTCACCATCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000282611.8 |
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| CDS GCA 72 bp | GATGAAAGAGGCGAGCAAGATGAAGATGATGGTGAATaGCCGGCTCAAAGCAAATTCCCGATTGTCCAACTG | + |
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Preference number: 6 (lower is better) Translates to: DERGEQDEDDGE*PAQSKFPIVQL Trigger: CAGTTGGACAATCGGGAATTTGCTTTGAGCCGGGCATTCACCATCATCTTCATCTTGCTCGCCTCTTTCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000282611.8 |
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| CDS CAA 90 bp | CTGATGGAGTCCTCTGTGTGCATGATCATCACACCCACGAACATGTaGAGGAAGATGAAAGAGGCGAGCAAGATGAAGATGATGGTGAAT | + |
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Preference number: 6 (lower is better) Translates to: LMESSVCMIITPTNM*RKMKEASKMKMMVN Trigger: ATTCACCATCATCTTCATCTTGCTCGCCTCTTTCATCTTCCTCAACATGTTCGTGGGTGTGATGATCATGCACACAGAGGACTCCATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000282611.8 |
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| CDS GCA 72 bp | TGGGGTCCACATAGACCTTCATGGACAACTCAGATGTaGAGATGGACACAAAGAAGATCTCCGAGAACTCAA | + |
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Preference number: 6 (lower is better) Translates to: WGPHRPSWTTQM*RWTQRRSPRTQ Trigger: TTGAGTTCTCGGAGATCTTCTTTGTGTCCATCTGCACATCTGAGTTGTCCATGAAGGTCTATGTGGACCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000282611.8 |
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| CDS CCA 72 bp | CTAGTGCCAAAATCATCCAAGACCATTGGGTCAGTGTaGCTCAAGGTCTTCTTAAAGTTCTCCACCAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: LVPKSSKTIGSV*LKVFLKFSTSS Trigger: TGAGCTGGTGGAGAACTTTAAGAAGACCTTGAGCCACACTGACCCAATGGTCTTGGATGATTTTGGCACTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000282611.8 |
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| CDS CCA 72 bp | CCACATAGACCTTCATGGACAACTCAGATGTGCAGATaGACACAAAGAAGATCTCCGAGAACTCAAGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: PHRPSWTTQMCR*TQRRSPRTQEV Trigger: GACTTCTTGAGTTCTCGGAGATCTTCTTTGTGTCCATCTGCACATCTGAGTTGTCCATGAAGGTCTATGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000282611.8 |
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| CDS TCA 72 bp | TCTAAGTGTTTCCTTCCCATCAAAATGGACTTATCTTaGCTATCATGCAAATCCATTCATTCACTGGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: SKCFLPIKMDLS*LSCKSIHSLEE Trigger: CTCTTCCAGTGAATGAATGGATTTGCATGATAGTCAAGATAAGTCCATTTTGATGGGAAGGAAACACTTAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511235.1 |
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