Pregenerated sensors for CASD1 (Homo sapiens)
Ensembl gene IDs: ENSG00000127995Ensembl transcript IDs: ENST00000297273.9, ENST00000417387.1, ENST00000443644.1, ENST00000447923.5, ENST00000471944.5, ENST00000489196.1
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATCAACAATGACAAAACCCTGTCATGGAGCCTCAGAACTATTCTGTaGGACAAAGTGTACAAAGATTTAGGCTTGCATACCCGAAAACCA | + |
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Preference number: 1 (lower is better) Translates to: INNDKTLSWSLRTIL*DKVYKDLGLHTRKP Trigger: TGGTTTTCGGGTATGCAAGCCTAAATCTTTGTACACTTTGTCTCACAGAATAGTTCTGAGGCTCCATGACAGGGTTTTGTCATTGTTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| 3UTR-3UTR CCA 90 bp | GGAGGTGATGTTCATTTTATATTGAGAAAGCGCTTCACTGCTACCATTGTGAATCATGTGGCTTTGCAATaGAATCCTCAGTCCACACTT | + |
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Preference number: 2 (lower is better) Translates to: GGDVHFILRKRFTATIVNHVALQ*NPQSTL Trigger: AAGTGTGGACTGAGGATTCCATTGCAAAGCCACATG...ATTCACAATGGTAGCAGTGAAGCGCTTTCTCAATATAAAATGAACATCACCTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443644.1 |
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| 3UTR-3UTR GCA 90 bp | GGAGGTGATGTTCATTTTATATTGAGAAAGCGCTTCACTGCTACCATTGTGAATAATCACATGTGGCTTTaGAATGGAATCCTCAGTCCA | + |
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Preference number: 2 (lower is better) Translates to: GGDVHFILRKRFTATIVNNHMWL*NGILSP Trigger: TGGACTGAGGATTCCATTGCAAAGCCACATGTGATT...ATTCACAATGGTAGCAGTGAAGCGCTTTCTCAATATAAAATGAACATCACCTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443644.1 |
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| 3UTR-3UTR GCA 90 bp | GTGTACAAAGATTTAGGCTTGCATACCCGAAAACCACAGTTAGGAAGAAAAATCATATCTCCAGATAGATaGTTTTCTCTTCTAGAGACA | + |
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Preference number: 2 (lower is better) Translates to: VYKDLGLHTRKPQLGRKIISPDR*FSLLET Trigger: TGTCTCTAGAAGAGAAAAGCATCTATCTGGAGATAT...GATTTTTCTTCCTAACTGTGGTTTTCGGGTATGCAAGCCTAAATCTTTGTACAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| 3UTR TCA 72 bp | GACAAAACCCTGTCATGGAGCCTCAGAACTATTCTGTaGGACAAAGTGTACAAAGATTTAGGCTTGCATACC | + |
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Preference number: 3 (lower is better) Translates to: DKTLSWSLRTIL*DKVYKDLGLHT Trigger: GGTATGCAAGCCTAAATCTTTGTACACTTTGTCTCACAGAATAGTTCTGAGGCTCCATGACAGGGTTTTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| 3UTR TCA 72 bp | GATCCACAGGGTAACTGGTATTACACTGGTATAGCTTaGGGAAAGGAAACAGGTGAACGTTTGGATTGGAAA | + |
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Preference number: 3 (lower is better) Translates to: DPQGNWYYTGIA*GKETGERLDWK Trigger: TTTCCAATCCAAACGTTCACCTGTTTCCTTTCCTCAAGCTATACCAGTGTAATACCAGTTACCCTGTGGATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| 3UTR-3UTR CAA 90 bp | GAAAGAGGAAGTTCCACAATGAATACAGGTGCAGACAGTCTTATTACCACAAATCACAGAACTGTCCTCTaGCCACAAACGTTTATATTT | + |
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Preference number: 3 (lower is better) Translates to: ERGSSTMNTGADSLITTNHRTVL*PQTFIF Trigger: AAATATAAACGTTTGTGGCAAGAGGACAGTTCTGTG...ATTTGTGGTAATAAGACTGTCTGCACCTGTATTCATTGTGGAACTTCCTCTTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| 3UTR TCA 72 bp | ATTGCACATATAAGAAAACAATACTGCCGTCATTCTTaGGTAAGAAAGTTTCCAATGAAAGAGGAAGTTCCA | + |
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Preference number: 3 (lower is better) Translates to: IAHIRKQYCRHS*VRKFPMKEEVP Trigger: TGGAACTTCCTCTTTCATTGGAAACTTTCTTACTCAAGAATGACGGCAGTATTGTTTTCTTATATGTGCAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS-3UTR CCA 90 bp | ATAGAACCATTAACTTCAGGATGCCACAGAAAATCCACTTTAACTGATGCAGTCCGGCGGGAGGCGAGGTaGCACGCTGCGAGCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: IEPLTSGCHRKSTLTDAVRREAR*HAASSS Trigger: GCTGCTGCTCGCAGCGTGCCACCTCGCCTCCCGCCG...GACTGCATCAGTTAAAGTGGATTTTCTGTGGCATCCTGAAGTTAATGGTTCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443644.1 |
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| CDS-3UTR GCA 90 bp | GAAAGAGGAAGTTCCACAATGAATACAGGTGCAGACAGTCTTATTACCACAAATGGCGAGGTGGCACGCTaGGAGCAGCAGCACGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: ERGSSTMNTGADSLITTNGEVAR*EQQHGH Trigger: GTGGCCGTGCTGCTGCTCGCAGCGTGCCACCTCGCC...ATTTGTGGTAATAAGACTGTCTGCACCTGTATTCATTGTGGAACTTCCTCTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS-3UTR CCA 90 bp | ATGTTCAACAGATGTCACAGAACTGTCCTCTTGCCACAAACGTTTATATTTACACGGCGGGAGGCGAGGTaGCACGCTGCGAGCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: MFNRCHRTVLLPQTFIFTRREAR*HAASSS Trigger: GCTGCTGCTCGCAGCGTGCCACCTCGCCTCCCGCCG...TGTAAATATAAACGTTTGTGGCAAGAGGACAGTTCTGTGACATCTGTTGAACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS-3UTR GCA 90 bp | GTTCATTTTATATTGAGAAAGCGCTTCACTGCTACCATTGTGAATCTTGATGGAGGCGAGGTGGCACGCTaGGAGCAGCAGCACGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: VHFILRKRFTATIVNLDGGEVAR*EQQHGH Trigger: GTGGCCGTGCTGCTGCTCGCAGCGTGCCACCTCGCC...TCCATCAAGATTCACAATGGTAGCAGTGAAGCGCTTTCTCAATATAAAATGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443644.1 |
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| CDS-3UTR TCA 90 bp | ATGTTCAACAGATGTCACAGAACTGTCCTCTTGCCACAAACGTTTATATTTACAATCTTGGTTCCTCCATaGCAACAGTGCGCGGCGGAG | + |
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Preference number: 4 (lower is better) Translates to: MFNRCHRTVLLPQTFIFTILVPP*QQCAAE Trigger: CTCCGCCGCGCACTGTTGTCATGGAGGAACCAAGAT...TGTAAATATAAACGTTTGTGGCAAGAGGACAGTTCTGTGACATCTGTTGAACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS-3UTR TCA 90 bp | GTGTACAAAGATTTAGGCTTGCATACCCGAAAACCACAGTTAGGAAGAAAAATCACAGGAGGCCGAGGTTaGCAACAGGACCCATCTACA | + |
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Preference number: 4 (lower is better) Translates to: VYKDLGLHTRKPQLGRKITGGRG*QQDPST Trigger: TGTAGATGGGTCCTGTTGTCAACCTCGGCCTCCTGT...GATTTTTCTTCCTAACTGTGGTTTTCGGGTATGCAAGCCTAAATCTTTGTACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS-3UTR GCA 90 bp | AAGAGGAAGTTCCACAATGAATACAGGTGCAGACAGTCTTATTACCACAAATTTACCCCTTGTGTCCGCTaGCAGCCATATGTGATACTG | + |
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Preference number: 4 (lower is better) Translates to: KRKFHNEYRCRQSYYHKFTPCVR*QPYVIL Trigger: CAGTATCACATATGGCTGGCAGCGGACACAAGGGGT...AAATTTGTGGTAATAAGACTGTCTGCACCTGTATTCATTGTGGAACTTCCTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS-3UTR CCA 90 bp | AAGAGGAAGTTCCACAATGAATACAGGTGCAGACAGTCTTATTACCACAAATTTCCAGAGCCGCCATCTTaGTTCCTCCATGACAACAGT | + |
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Preference number: 4 (lower is better) Translates to: KRKFHNEYRCRQSYYHKFPEPPS*FLHDNS Trigger: ACTGTTGTCATGGAGGAACCAAGATGGCGGCTCTGG...AAATTTGTGGTAATAAGACTGTCTGCACCTGTATTCATTGTGGAACTTCCTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS-3UTR TCA 90 bp | GTGTACAAAGATTTAGGCTTGCATACCCGAAAACCACAGTTAGGAAGAAAAATCGAGGAAGTTCCACAATaGATACAGGTGCAGACAGTC | + |
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Preference number: 4 (lower is better) Translates to: VYKDLGLHTRKPQLGRKIEEVPQ*IQVQTV Trigger: GACTGTCTGCACCTGTATTCATTGTGGAACTTCCTC...GATTTTTCTTCCTAACTGTGGTTTTCGGGTATGCAAGCCTAAATCTTTGTACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS-3UTR TCA 90 bp | GGAGGTGATGTTCATTTTATATTGAGAAAGCGCTTCACTGCTACCATTGTGAATTCACTGCTACCATTGTaGATCTTGATGGACCATGTG | + |
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Preference number: 4 (lower is better) Translates to: GGDVHFILRKRFTATIVNSLLPL*ILMDHV Trigger: CACATGGTCCATCAAGATTCACAATGGTAGCAGTGA...ATTCACAATGGTAGCAGTGAAGCGCTTTCTCAATATAAAATGAACATCACCTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443644.1 |
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| CDS-3UTR TCA 90 bp | GAAAGAGGAAGTTCCACAATGAATACAGGTGCAGACAGTCTTATTACCACAAATTGCCCATACCCTGTCTaGAATAAATATGCAGCAACC | + |
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Preference number: 4 (lower is better) Translates to: ERGSSTMNTGADSLITTNCPYPV*NKYAAT Trigger: GGTTGCTGCATATTTATTTCAGACAGGGTATGGGCA...ATTTGTGGTAATAAGACTGTCTGCACCTGTATTCATTGTGGAACTTCCTCTTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS-3UTR TCA 90 bp | GAAAGAGGAAGTTCCACAATGAATACAGGTGCAGACAGTCTTATTACCACAAATTGCATCATACAACTGTaGGGTTGCCAAACTTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: ERGSSTMNTGADSLITTNCIIQL*GCQTFS Trigger: AGAGAAAGTTTGGCAACCTCACAGTTGTATGATGCA...ATTTGTGGTAATAAGACTGTCTGCACCTGTATTCATTGTGGAACTTCCTCTTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS-3UTR TCA 90 bp | ATGTTCAACAGATGTCACAGAACTGTCCTCTTGCCACAAACGTTTATATTTACATCACTGCTACCATTGTaGATCTTGATGGACCATGTG | + |
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Preference number: 4 (lower is better) Translates to: MFNRCHRTVLLPQTFIFTSLLPL*ILMDHV Trigger: CACATGGTCCATCAAGATTCACAATGGTAGCAGTGA...TGTAAATATAAACGTTTGTGGCAAGAGGACAGTTCTGTGACATCTGTTGAACAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS-3UTR TCA 90 bp | ATGTTCAACAGATGTCACAGAACTGTCCTCTTGCCACAAACGTTTATATTTACACCTTCAGAAAGTATTTaGCGCTTCTGCAAAGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: MFNRCHRTVLLPQTFIFTPSESI*RFCKAR Trigger: TCTGGCTTTGCAGAAGCGTCAAATACTTTCTGAAGG...TGTAAATATAAACGTTTGTGGCAAGAGGACAGTTCTGTGACATCTGTTGAACAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS-3UTR CCA 90 bp | AAGAGGAAGTTCCACAATGAATACAGGTGCAGACAGTCTTATTACCACAAATTTCATGTGGCTTTGCAATaGAATCCTCAGTCCACACTT | + |
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Preference number: 4 (lower is better) Translates to: KRKFHNEYRCRQSYYHKFHVALQ*NPQSTL Trigger: AAGTGTGGACTGAGGATTCCATTGCAAAGCCACATG...AAATTTGTGGTAATAAGACTGTCTGCACCTGTATTCATTGTGGAACTTCCTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS-3UTR CCA 90 bp | GGAGGTGATGTTCATTTTATATTGAGAAAGCGCTTCACTGCTACCATTGTGAATTGCTACAATCACATGTaGCTTTGCAATGGAATCCTC | + |
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Preference number: 4 (lower is better) Translates to: GGDVHFILRKRFTATIVNCYNHM*LCNGIL Trigger: GAGGATTCCATTGCAAAGCCACATGTGATTGTAGCA...ATTCACAATGGTAGCAGTGAAGCGCTTTCTCAATATAAAATGAACATCACCTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443644.1 |
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| CDS-3UTR CCA 90 bp | TCAACAGATGTCACAGAACTGTCCTCTTGCCACAAACGTTTATATTTACATACAACAGAAACAGACGGATaGAGTTCATTGCACTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: STDVTELSSCHKRLYLHTTETDG*SSLHSA Trigger: AGCAGAGTGCAATGAACTCCATCCGTCTGTTTCTGT...TGTATGTAAATATAAACGTTTGTGGCAAGAGGACAGTTCTGTGACATCTGTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS-3UTR CCA 90 bp | TCAACAGATGTCACAGAACTGTCCTCTTGCCACAAACGTTTATATTTACATACAGACAAAACCCTGTCATaGAGCCTCAGAACTATTCTG | + |
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Preference number: 4 (lower is better) Translates to: STDVTELSSCHKRLYLHTDKTLS*SLRTIL Trigger: CAGAATAGTTCTGAGGCTCCATGACAGGGTTTTGTC...TGTATGTAAATATAAACGTTTGTGGCAAGAGGACAGTTCTGTGACATCTGTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS-3UTR CCA 90 bp | GTGTACAAAGATTTAGGCTTGCATACCCGAAAACCACAGTTAGGAAGAAAAATCGATCCACAGGGTAACTaGTATTACACTGGTATAGCT | + |
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Preference number: 4 (lower is better) Translates to: VYKDLGLHTRKPQLGRKIDPQGN*YYTGIA Trigger: AGCTATACCAGTGTAATACCAGTTACCCTGTGGATC...GATTTTTCTTCCTAACTGTGGTTTTCGGGTATGCAAGCCTAAATCTTTGTACAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS-3UTR TCA 90 bp | TCAACAGATGTCACAGAACTGTCCTCTTGCCACAAACGTTTATATTTACATACAGGTCTAACCTCCATCTaGACCACCATTCATATACAT | + |
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Preference number: 4 (lower is better) Translates to: STDVTELSSCHKRLYLHTGLTSI*TTIHIH Trigger: ATGTATATGAATGGTGGTTCAGATGGAGGTTAGACC...TGTATGTAAATATAAACGTTTGTGGCAAGAGGACAGTTCTGTGACATCTGTTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS-3UTR TCA 90 bp | GAAAGAGGAAGTTCCACAATGAATACAGGTGCAGACAGTCTTATTACCACAAATAGGAAAGGAAACAGGTaGACGTTTGGATTGGAAAAA | + |
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Preference number: 4 (lower is better) Translates to: ERGSSTMNTGADSLITTNRKGNR*TFGLEK Trigger: TTTTTCCAATCCAAACGTTCACCTGTTTCCTTTCCT...ATTTGTGGTAATAAGACTGTCTGCACCTGTATTCATTGTGGAACTTCCTCTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS-3UTR TCA 90 bp | AAGAGGAAGTTCCACAATGAATACAGGTGCAGACAGTCTTATTACCACAAATTTTACACTGGTATAGCTTaGGGAAAGGAAACAGGTGAA | + |
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Preference number: 4 (lower is better) Translates to: KRKFHNEYRCRQSYYHKFYTGIA*GKETGE Trigger: TTCACCTGTTTCCTTTCCTCAAGCTATACCAGTGTA...AAATTTGTGGTAATAAGACTGTCTGCACCTGTATTCATTGTGGAACTTCCTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS-3UTR GCA 90 bp | TCAACAGATGTCACAGAACTGTCCTCTTGCCACAAACGTTTATATTTACATACAAATCACATGTGGCTTTaGAATGGAATCCTCAGTCCA | + |
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Preference number: 4 (lower is better) Translates to: STDVTELSSCHKRLYLHTNHMWL*NGILSP Trigger: TGGACTGAGGATTCCATTGCAAAGCCACATGTGATT...TGTATGTAAATATAAACGTTTGTGGCAAGAGGACAGTTCTGTGACATCTGTTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS-3UTR GCA 90 bp | GAAAGAGGAAGTTCCACAATGAATACAGGTGCAGACAGTCTTATTACCACAAATACGGATGGAGTTCATTaGACTCTGCTTTGTTTTTAC | + |
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Preference number: 4 (lower is better) Translates to: ERGSSTMNTGADSLITTNTDGVH*TLLCFY Trigger: GTAAAAACAAAGCAGAGTGCAATGAACTCCATCCGT...ATTTGTGGTAATAAGACTGTCTGCACCTGTATTCATTGTGGAACTTCCTCTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS-3UTR CCA 90 bp | ATGTTCAACAGATGTCACAGAACTGTCCTCTTGCCACAAACGTTTATATTTACATGCTACAATCACATGTaGCTTTGCAATGGAATCCTC | + |
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Preference number: 4 (lower is better) Translates to: MFNRCHRTVLLPQTFIFTCYNHM*LCNGIL Trigger: GAGGATTCCATTGCAAAGCCACATGTGATTGTAGCA...TGTAAATATAAACGTTTGTGGCAAGAGGACAGTTCTGTGACATCTGTTGAACAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS-3UTR TCA 90 bp | ATGTTCAACAGATGTCACAGAACTGTCCTCTTGCCACAAACGTTTATATTTACATACTGCCGTCATTCTTaGGTAAGAAAGTTTCCAATG | + |
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Preference number: 4 (lower is better) Translates to: MFNRCHRTVLLPQTFIFTYCRHS*VRKFPM Trigger: CATTGGAAACTTTCTTACTCAAGAATGACGGCAGTA...TGTAAATATAAACGTTTGTGGCAAGAGGACAGTTCTGTGACATCTGTTGAACAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS-3UTR GCA 90 bp | GTGTACAAAGATTTAGGCTTGCATACCCGAAAACCACAGTTAGGAAGAAAAATCCTTCATGAACAGATTTaGACGGTCACACATATAGAA | + |
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Preference number: 4 (lower is better) Translates to: VYKDLGLHTRKPQLGRKILHEQI*TVTHIE Trigger: TTCTATATGTGTGACCGTGCAAATCTGTTCATGAAG...GATTTTTCTTCCTAACTGTGGTTTTCGGGTATGCAAGCCTAAATCTTTGTACAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS-3UTR GCA 90 bp | GAAAGAGGAAGTTCCACAATGAATACAGGTGCAGACAGTCTTATTACCACAAATACCAGAACTCGAATGTaGATGTATACAGGCAAAAAT | + |
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Preference number: 4 (lower is better) Translates to: ERGSSTMNTGADSLITTNTRTRM*MYTGKN Trigger: ATTTTTGCCTGTATACATGCACATTCGAGTTCTGGT...ATTTGTGGTAATAAGACTGTCTGCACCTGTATTCATTGTGGAACTTCCTCTTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS-3UTR GCA 90 bp | GAAAGAGGAAGTTCCACAATGAATACAGGTGCAGACAGTCTTATTACCACAAATAAATGCAGCTATACATaGCAACCTTTTCAAGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: ERGSSTMNTGADSLITTNKCSYT*QPFQER Trigger: TCTCTCTTGAAAAGGTTGGCATGTATAGCTGCATTT...ATTTGTGGTAATAAGACTGTCTGCACCTGTATTCATTGTGGAACTTCCTCTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS-3UTR TCA 90 bp | ATGTTCAACAGATGTCACAGAACTGTCCTCTTGCCACAAACGTTTATATTTACACATCCAAAGATTCCATaGTGGTTTCTTGAGCAATTA | + |
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Preference number: 4 (lower is better) Translates to: MFNRCHRTVLLPQTFIFTHPKIP*WFLEQL Trigger: TAATTGCTCAAGAAACCATCATGGAATCTTTGGATG...TGTAAATATAAACGTTTGTGGCAAGAGGACAGTTCTGTGACATCTGTTGAACAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS-3UTR TCA 90 bp | AAGAGGAAGTTCCACAATGAATACAGGTGCAGACAGTCTTATTACCACAAATTTTTTTATCCAAAAGTATaGGAAATGCCCATACCCTGT | + |
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Preference number: 4 (lower is better) Translates to: KRKFHNEYRCRQSYYHKFFYPKV*EMPIPC Trigger: ACAGGGTATGGGCATTTCTCATACTTTTGGATAAAA...AAATTTGTGGTAATAAGACTGTCTGCACCTGTATTCATTGTGGAACTTCCTCTT 37% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS-3UTR TCA 90 bp | ATGTTCAACAGATGTCACAGAACTGTCCTCTTGCCACAAACGTTTATATTTACACTCAGAACTATTCTGTaGGACAAAGTGTACAAAGAT | + |
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Preference number: 4 (lower is better) Translates to: MFNRCHRTVLLPQTFIFTLRTIL*DKVYKD Trigger: ATCTTTGTACACTTTGTCTCACAGAATAGTTCTGAG...TGTAAATATAAACGTTTGTGGCAAGAGGACAGTTCTGTGACATCTGTTGAACAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS-3UTR GCA 90 bp | AAGAGGAAGTTCCACAATGAATACAGGTGCAGACAGTCTTATTACCACAAATTTAAAGATCTTCTCAAATaGACCCTGAGAATATGCCAA | + |
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Preference number: 4 (lower is better) Translates to: KRKFHNEYRCRQSYYHKFKDLLK*TLRICQ Trigger: TTGGCATATTCTCAGGGTGCATTTGAGAAGATCTTT...AAATTTGTGGTAATAAGACTGTCTGCACCTGTATTCATTGTGGAACTTCCTCTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS-3UTR GCA 90 bp | ATGTTCAACAGATGTCACAGAACTGTCCTCTTGCCACAAACGTTTATATTTACAGAGTTCATTGCACTCTaGTTTGTTTTTACAACTGCT | + |
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Preference number: 4 (lower is better) Translates to: MFNRCHRTVLLPQTFIFTEFIAL*FVFTTA Trigger: AGCAGTTGTAAAAACAAAGCAGAGTGCAATGAACTC...TGTAAATATAAACGTTTGTGGCAAGAGGACAGTTCTGTGACATCTGTTGAACAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS-3UTR GCA 90 bp | GAAAGAGGAAGTTCCACAATGAATACAGGTGCAGACAGTCTTATTACCACAAATATATCTCCAGATAGATaGTTTTCTCTTCTAGAGACA | + |
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Preference number: 4 (lower is better) Translates to: ERGSSTMNTGADSLITTNISPDR*FSLLET Trigger: TGTCTCTAGAAGAGAAAAGCATCTATCTGGAGATAT...ATTTGTGGTAATAAGACTGTCTGCACCTGTATTCATTGTGGAACTTCCTCTTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS-3UTR GCA 90 bp | AAGAGGAAGTTCCACAATGAATACAGGTGCAGACAGTCTTATTACCACAAATTTTCAATCGTAACAACTTaGATGTTTACTACACTGCAC | + |
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Preference number: 4 (lower is better) Translates to: KRKFHNEYRCRQSYYHKFSIVTT*MFTTLH Trigger: GTGCAGTGTAGTAAACATGCAAGTTGTTACGATTGA...AAATTTGTGGTAATAAGACTGTCTGCACCTGTATTCATTGTGGAACTTCCTCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS-3UTR GCA 90 bp | ATGTTCAACAGATGTCACAGAACTGTCCTCTTGCCACAAACGTTTATATTTACAATTCAAAATACTGACTaGAGCTTCATTGTAAGCATC | + |
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Preference number: 4 (lower is better) Translates to: MFNRCHRTVLLPQTFIFTIQNTD*SFIVSI Trigger: GATGCTTACAATGAAGCTGCAGTCAGTATTTTGAAT...TGTAAATATAAACGTTTGTGGCAAGAGGACAGTTCTGTGACATCTGTTGAACAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS-3UTR GCA 90 bp | TCAACAGATGTCACAGAACTGTCCTCTTGCCACAAACGTTTATATTTACATACAATTCATAAGAATCATTaGAGTAGTTTCTCTGCTCGA | + |
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Preference number: 4 (lower is better) Translates to: STDVTELSSCHKRLYLHTIHKNH*SSFSAR Trigger: TCGAGCAGAGAAACTACTGCAATGATTCTTATGAAT...TGTATGTAAATATAAACGTTTGTGGCAAGAGGACAGTTCTGTGACATCTGTTGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS-3UTR GCA 90 bp | TCAACAGATGTCACAGAACTGTCCTCTTGCCACAAACGTTTATATTTACATACAAACAGTAAGCCAAAATaGCAGAAACAATTTCCGTTT | + |
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Preference number: 4 (lower is better) Translates to: STDVTELSSCHKRLYLHTNSKPK*QKQFPF Trigger: AAACGGAAATTGTTTCTGGCATTTTGGCTTACTGTT...TGTATGTAAATATAAACGTTTGTGGCAAGAGGACAGTTCTGTGACATCTGTTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS-3UTR GCA 90 bp | AAGAGGAAGTTCCACAATGAATACAGGTGCAGACAGTCTTATTACCACAAATTTACAGAACTGTCCTCTTaGCACAAACGTTTATATTTA | + |
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Preference number: 4 (lower is better) Translates to: KRKFHNEYRCRQSYYHKFTELSS*HKRLYL Trigger: TAAATATAAACGTTTGTGGCAAGAGGACAGTTCTGT...AAATTTGTGGTAATAAGACTGTCTGCACCTGTATTCATTGTGGAACTTCCTCTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS-3UTR CCA 90 bp | AAGAGGAAGTTCCACAATGAATACAGGTGCAGACAGTCTTATTACCACAAATTTAAAACACTTGGACAATaGCCAAAGAGAAAAGATCTT | + |
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Preference number: 4 (lower is better) Translates to: KRKFHNEYRCRQSYYHKFKTLGQ*PKRKDL Trigger: AAGATCTTTTCTCTTTGGCCATTGTCCAAGTGTTTT...AAATTTGTGGTAATAAGACTGTCTGCACCTGTATTCATTGTGGAACTTCCTCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| 3UTR CAA 72 bp | CCACATATGTTCAACAGATGTCACAGAACTGTCCTCTaGCCACAAACGTTTATATTTACATACACATTTATA | + |
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Preference number: 4 (lower is better) Translates to: PHMFNRCHRTVL*PQTFIFTYTFI Trigger: TATAAATGTGTATGTAAATATAAACGTTTGTGGCAAGAGGACAGTTCTGTGACATCTGTTGAACATATGTGG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS GCA 90 bp | ACACGAATCATTGCCTCGGTAGCGGCGGGAGGCGAGGTGGCACGCTaGGAGCAGCAGCACGGCCACCAGCGCCAGCACCTTGGCGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: TRIIASVAAGGEVAR*EQQHGHQRQHLGAP Trigger: AGGAGCGCCAAGGTGCTGGCGCTGGTGGCCGTGCTGCTGCTCGCAGCGTGCCACCTCGCCTCCCGCCGCTACCGAGGCAATGATTCGTGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000297273.9 ENST00000417387.1 |
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| CDS GCA 90 bp | GGAATGTTTTCATGCTCGGTAGCGGCGGGAGGCGAGGTGGCACGCTaGGAGCAGCAGCACGGCCACCAGCGCCAGCACCTTGGCGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: GMFSCSVAAGGEVAR*EQQHGHQRQHLGAP Trigger: AGGAGCGCCAAGGTGCTGGCGCTGGTGGCCGTGCTGCTGCTCGCAGCGTGCCACCTCGCCTCCCGCCGCTACCGAGCATGAAAACATTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443644.1 |
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| CDS-3UTR CAA 90 bp | TCAACAGATGTCACAGAACTGTCCTCTTGCCACAAACGTTTATATTTACATACAACCAGCGCCAGCACCTaGGCGCTCCTCACGCTGAAG | + |
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Preference number: 5 (lower is better) Translates to: STDVTELSSCHKRLYLHTTSAST*ALLTLK Trigger: CTTCAGCGTGAGGAGCGCCAAGGTGCTGGCGCTGGT...TGTATGTAAATATAAACGTTTGTGGCAAGAGGACAGTTCTGTGACATCTGTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS-3UTR CAA 90 bp | ATTTCTGGTGCTACTATTCAAAATACTGACTGCAGCTTCATTGTAAGCATCTATACCAGCGCCAGCACCTaGGCGCTCCTCACGCTGAAG | + |
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Preference number: 5 (lower is better) Translates to: ISGATIQNTDCSFIVSIYTSAST*ALLTLK Trigger: CTTCAGCGTGAGGAGCGCCAAGGTGCTGGCGCTGGT...ATAGATGCTTACAATGAAGCTGCAGTCAGTATTTTGAATAGTAGCACCAGAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443644.1 |
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| CDS GCA 90 bp | AACTGTCCAAACATAAGAAAGCACAGAGGGAGGTGCACAAGTCTGTaGTTTTCTGGAAACAGTGATCAAAAGGCAGTGATGGCTCTCCAT | + |
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Preference number: 5 (lower is better) Translates to: NCPNIRKHRGRCTSL*FSGNSDQKAVMALH Trigger: ATGGAGAGCCATCACTGCCTTTTGATCACTGTTTCCAGAAAAGCACAGACTTGTGCACCTCCCTCTGTGCTTTCTTATGTTTGGACAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471944.5 |
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| CDS TCA 90 bp | AAACAAGCAGCTAGCTTCTGTATGAGAGTAACAGGAGGCCGAGGTTaGCAACAGGACCCATCTACAGGCTTCAAAATCTTATTGCAATAC | + |
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Preference number: 5 (lower is better) Translates to: KQAASFCMRVTGGRG*QQDPSTGFKILLQY Trigger: GTATTGCAATAAGATTTTGAAGCCTGTAGATGGGTCCTGTTGTCAACCTCGGCCTCCTGTTACTCTCATACAGAAGCTAGCTGCTTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS TCA 90 bp | AAAGCACAGAGGGAGGTGCACAAGTCTGTGCTTTTCTGGAAACAGTaGTCAAAAGGCAGTGATGGCTCTCCATATGAAACACCTTACATT | + |
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Preference number: 5 (lower is better) Translates to: KAQREVHKSVLFWKQ*SKGSDGSPYETPYI Trigger: AATGTAAGGTGTTTCATATGGAGAGCCATCACTGCCTTTTGATCACTGTTTCCAGAAAAGCACAGACTTGTGCACCTCCCTCTGTGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471944.5 |
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| CDS-3UTR CAA 90 bp | TCAACAGATGTCACAGAACTGTCCTCTTGCCACAAACGTTTATATTTACATACAAACAGGAGGCCGAGGTaGACAACAGGACCCATCTAC | + |
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Preference number: 5 (lower is better) Translates to: STDVTELSSCHKRLYLHTNRRPR*TTGPIY Trigger: GTAGATGGGTCCTGTTGTCAACCTCGGCCTCCTGTT...TGTATGTAAATATAAACGTTTGTGGCAAGAGGACAGTTCTGTGACATCTGTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS-3UTR CAA 90 bp | ATGTTCAACAGATGTCACAGAACTGTCCTCTTGCCACAAACGTTTATATTTACAGTACCAAGATACCCCTaGTGTCCGCTGCCAGCCATA | + |
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Preference number: 5 (lower is better) Translates to: MFNRCHRTVLLPQTFIFTVPRYP*CPLPAI Trigger: TATGGCTGGCAGCGGACACAAGGGGTATCTTGGTAC...TGTAAATATAAACGTTTGTGGCAAGAGGACAGTTCTGTGACATCTGTTGAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS GCA 90 bp | TTTGGTATGTTCAACTGTCCAAACATAAGAAAGCACAGAGGGAGGTaGACAAGTCTGTGCTTTTCTGGAAACAGTGATCAAAAGGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: FGMFNCPNIRKHRGR*TSLCFSGNSDQKAV Trigger: CACTGCCTTTTGATCACTGTTTCCAGAAAAGCACAGACTTGTGCACCTCCCTCTGTGCTTTCTTATGTTTGGACAGTTGAACATACCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471944.5 |
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| CDS-3UTR CAA 90 bp | GTGTACAAAGATTTAGGCTTGCATACCCGAAAACCACAGTTAGGAAGAAAAATCCATACAACTGTGAGGTaGCCAAACTTTCTCTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: VYKDLGLHTRKPQLGRKIHTTVR*PNFLSK Trigger: CTTGGAGAGAAAGTTTGGCAACCTCACAGTTGTATG...GATTTTTCTTCCTAACTGTGGTTTTCGGGTATGCAAGCCTAAATCTTTGTACAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS-3UTR CAA 90 bp | AAGAGGAAGTTCCACAATGAATACAGGTGCAGACAGTCTTATTACCACAAATTTCAATCACATGTGGCTTaGCAATGGAATCCTCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: KRKFHNEYRCRQSYYHKFQSHVA*QWNPQS Trigger: GGACTGAGGATTCCATTGCAAAGCCACATGTGATTG...AAATTTGTGGTAATAAGACTGTCTGCACCTGTATTCATTGTGGAACTTCCTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS-3UTR CAA 90 bp | ATGTTCAACAGATGTCACAGAACTGTCCTCTTGCCACAAACGTTTATATTTACAGTGCTGACAATGATGTaGAGCATAGGGTTTCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: MFNRCHRTVLLPQTFIFTVLTMM*SIGFPG Trigger: ACCTGGAAACCCTATGCTCAACATCATTGTCAGCAC...TGTAAATATAAACGTTTGTGGCAAGAGGACAGTTCTGTGACATCTGTTGAACAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS CCA 90 bp | AAACTATCAGTAAAAACTGCTTGCAAGTTTGCTCATCACCTGTTTTaGTATGTTCAACTGTCCAAACATAAGAAAGCACAGAGGGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: KLSVKTACKFAHHLF*YVQLSKHKKAQREV Trigger: CACCTCCCTCTGTGCTTTCTTATGTTTGGACAGTTGAACATACCAAAACAGGTGATGAGCAAACTTGCAAGCAGTTTTTACTGATAGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000471944.5 |
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| CDS-3UTR CAA 90 bp | GCTACTATTCAAAATACTGACTGCAGCTTCATTGTAAGCATCTATCTTCTCATTCAATCACATGTGGCTTaGCAATGGAATCCTCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ATIQNTDCSFIVSIYLLIQSHVA*QWNPQS Trigger: GGACTGAGGATTCCATTGCAAAGCCACATGTGATTG...AATGAGAAGATAGATGCTTACAATGAAGCTGCAGTCAGTATTTTGAATAGTAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443644.1 |
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| CDS-3UTR CAA 90 bp | TCAACAGATGTCACAGAACTGTCCTCTTGCCACAAACGTTTATATTTACATACATCCTTCAGAAAGTATTaGACGCTTCTGCAAAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: STDVTELSSCHKRLYLHTSFRKY*TLLQSQ Trigger: CTGGCTTTGCAGAAGCGTCAAATACTTTCTGAAGGA...TGTATGTAAATATAAACGTTTGTGGCAAGAGGACAGTTCTGTGACATCTGTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS-3UTR CAA 90 bp | GTGTACAAAGATTTAGGCTTGCATACCCGAAAACCACAGTTAGGAAGAAAAATCTACAAAGATTTAGGCTaGCATACCCGAAAACCACAG | + |
|
Preference number: 5 (lower is better) Translates to: VYKDLGLHTRKPQLGRKIYKDLG*HTRKPQ Trigger: CTGTGGTTTTCGGGTATGCAAGCCTAAATCTTTGTA...GATTTTTCTTCCTAACTGTGGTTTTCGGGTATGCAAGCCTAAATCTTTGTACAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS TCA 90 bp | CAGTTCTTTGCTTCACTGATTTTGTATTTATGCATCATACAACTGTaGGGTTGCCAAACTTTCTCTCCAAGAAATCTGCCACTTGAGAGA | + |
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Preference number: 5 (lower is better) Translates to: QFFASLILYLCIIQL*GCQTFSPRNLPLER Trigger: TCTCTCAAGTGGCAGATTTCTTGGAGAGAAAGTTTGGCAACCTCACAGTTGTATGATGCATAAATACAAAATCAGTGAAGCAAAGAACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000297273.9 ENST00000447923.5 |
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| CDS-3UTR CAA 90 bp | ATGTTCAACAGATGTCACAGAACTGTCCTCTTGCCACAAACGTTTATATTTACATCATTGCACTCTGCTTaGTTTTTACAACTGCTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: MFNRCHRTVLLPQTFIFTSLHSA*FLQLLA Trigger: GGCTAGCAGTTGTAAAAACAAAGCAGAGTGCAATGA...TGTAAATATAAACGTTTGTGGCAAGAGGACAGTTCTGTGACATCTGTTGAACAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS-3UTR CAA 90 bp | AAGAGGAAGTTCCACAATGAATACAGGTGCAGACAGTCTTATTACCACAAATTTGACGGATGGAGTTCATaGCACTCTGCTTTGTTTTTA | + |
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Preference number: 5 (lower is better) Translates to: KRKFHNEYRCRQSYYHKFDGWSS*HSALFL Trigger: TAAAAACAAAGCAGAGTGCAATGAACTCCATCCGTC...AAATTTGTGGTAATAAGACTGTCTGCACCTGTATTCATTGTGGAACTTCCTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS-3UTR CAA 90 bp | GAAAGAGGAAGTTCCACAATGAATACAGGTGCAGACAGTCTTATTACCACAAATCTCAATCGTAACAACTaGCATGTTTACTACACTGCA | + |
|
Preference number: 5 (lower is better) Translates to: ERGSSTMNTGADSLITTNLNRNN*HVYYTA Trigger: TGCAGTGTAGTAAACATGCAAGTTGTTACGATTGAG...ATTTGTGGTAATAAGACTGTCTGCACCTGTATTCATTGTGGAACTTCCTCTTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS TCA 90 bp | AGGAATGTTTTCATGCTGATTTTGTATTTATGCATCATACAACTGTaGGGTTGCCAAACTTTCTCTCCAAGAAATCTGCCACTTGAGAGA | + |
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Preference number: 5 (lower is better) Translates to: RNVFMLILYLCIIQL*GCQTFSPRNLPLER Trigger: TCTCTCAAGTGGCAGATTTCTTGGAGAGAAAGTTTGGCAACCTCACAGTTGTATGATGCATAAATACAAAATCAGCATGAAAACATTCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000417387.1 |
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| CDS-3UTR CAA 90 bp | ATAGAACCATTAACTTCAGGATGCCACAGAAAATCCACTTTAACTGATGCAGTCGATGTTCATTTTATATaGAGAAAGCGCTTCACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: IEPLTSGCHRKSTLTDAVDVHFI*RKRFTA Trigger: AGCAGTGAAGCGCTTTCTCAATATAAAATGAACATC...GACTGCATCAGTTAAAGTGGATTTTCTGTGGCATCCTGAAGTTAATGGTTCTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000443644.1 |
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| CDS-3UTR CAA 90 bp | AAGAGGAAGTTCCACAATGAATACAGGTGCAGACAGTCTTATTACCACAAATTTCACAGAACTGTCCTCTaGCCACAAACGTTTATATTT | + |
|
Preference number: 5 (lower is better) Translates to: KRKFHNEYRCRQSYYHKFHRTVL*PQTFIF Trigger: AAATATAAACGTTTGTGGCAAGAGGACAGTTCTGTG...AAATTTGTGGTAATAAGACTGTCTGCACCTGTATTCATTGTGGAACTTCCTCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS-3UTR CAA 90 bp | GAAAGAGGAAGTTCCACAATGAATACAGGTGCAGACAGTCTTATTACCACAAATATACTGCCGTCATTCTaGAGTAAGAAAGTTTCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: ERGSSTMNTGADSLITTNILPSF*SKKVSN Trigger: ATTGGAAACTTTCTTACTCAAGAATGACGGCAGTAT...ATTTGTGGTAATAAGACTGTCTGCACCTGTATTCATTGTGGAACTTCCTCTTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS CCA 90 bp | GTTATTTTTGTTCTAAAGTCTACCCAAACTGGATTTCTCAACACATaGTCGGTATGCTGCATACCAATGAACATTTTAAGTAGTACATGG | + |
|
Preference number: 5 (lower is better) Translates to: VIFVLKSTQTGFLNT*SVCCIPMNILSSTW Trigger: CCATGTACTACTTAAAATGTTCATTGGTATGCAGCATACCGACCATGTGTTGAGAAATCCAGTTTGGGTAGACTTTAGAACAAAAATAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000489196.1 |
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| CDS-3UTR CAA 90 bp | TCAACAGATGTCACAGAACTGTCCTCTTGCCACAAACGTTTATATTTACATACAGATGTTCATTTTATATaGAGAAAGCGCTTCACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: STDVTELSSCHKRLYLHTDVHFI*RKRFTA Trigger: AGCAGTGAAGCGCTTTCTCAATATAAAATGAACATC...TGTATGTAAATATAAACGTTTGTGGCAAGAGGACAGTTCTGTGACATCTGTTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS GCA 72 bp | ATTGCCTCGGTAGCGGCGGGAGGCGAGGTGGCACGCTaGGAGCAGCAGCACGGCCACCAGCGCCAGCACCTT | + |
|
Preference number: 6 (lower is better) Translates to: IASVAAGGEVAR*EQQHGHQRQHL Trigger: AAGGTGCTGGCGCTGGTGGCCGTGCTGCTGCTCGCAGCGTGCCACCTCGCCTCCCGCCGCTACCGAGGCAAT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000297273.9 ENST00000417387.1 |
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| CDS GCA 72 bp | TCATGCTCGGTAGCGGCGGGAGGCGAGGTGGCACGCTaGGAGCAGCAGCACGGCCACCAGCGCCAGCACCTT | + |
|
Preference number: 6 (lower is better) Translates to: SCSVAAGGEVAR*EQQHGHQRQHL Trigger: AAGGTGCTGGCGCTGGTGGCCGTGCTGCTGCTCGCAGCGTGCCACCTCGCCTCCCGCCGCTACCGAGCATGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443644.1 |
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| CDS CCA 72 bp | CCCGCTTGCCCAGGTTGTAGGCCAGAGCCGCCATCTTaGTTCCTCCATGACAACAGTGCGCGGCGGAGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: PACPGCRPEPPS*FLHDNSARRSG Trigger: CCCGCTCCGCCGCGCACTGTTGTCATGGAGGAACCAAGATGGCGGCTCTGGCCTACAACCTGGGCAAGCGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS CAA 90 bp | TACAACTGTGAGGTTGCCAAACTTTCTCTCCAAGAAATCTGCCACTaGAGAGAAGGTATTCACACGAATCATTGCCTCGGTAGCGGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: YNCEVAKLSLQEICH*REGIHTNHCLGSGG Trigger: CCCGCCGCTACCGAGGCAATGATTCGTGTGAATACCTTCTCTCAAGTGGCAGATTTCTTGGAGAGAAAGTTTGGCAACCTCACAGTTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000297273.9 ENST00000417387.1 |
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| CDS TCA 72 bp | GCTAGCTTCTGTATGAGAGTAACAGGAGGCCGAGGTTaGCAACAGGACCCATCTACAGGCTTCAAAATCTTA | + |
|
Preference number: 6 (lower is better) Translates to: ASFCMRVTGGRG*QQDPSTGFKIL Trigger: TAAGATTTTGAAGCCTGTAGATGGGTCCTGTTGTCAACCTCGGCCTCCTGTTACTCTCATACAGAAGCTAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS CAA 90 bp | TACAACTGTGAGGTTGCCAAACTTTCTCTCCAAGAAATCTGCCACTaGAGAGAAGGTATTCACACGAATCATTGCCGCTCTGGCCAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: YNCEVAKLSLQEICH*REGIHTNHCRSGQF Trigger: AAACTGGCCAGAGCGGCAATGATTCGTGTGAATACCTTCTCTCAAGTGGCAGATTTCTTGGAGAGAAAGTTTGGCAACCTCACAGTTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000447923.5 |
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| CDS GCA 72 bp | ACCCAAACTGGATTTCTCAACACATGGTCGGTATGCTaGATACCAATGAACATTTTAAGTAGTACATGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: TQTGFLNTWSVC*IPMNILSSTWL Trigger: CAGCCATGTACTACTTAAAATGTTCATTGGTATGCAGCATACCGACCATGTGTTGAGAAATCCAGTTTGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489196.1 |
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| CDS CAA 90 bp | ATTTCATGTGCCACACAAACAAATATGAAAGTGCTGACAATGATGTaGAGCATAGGGTTTCCAGGTATCAGTACCAAGATACCCCTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: ISCATQTNMKVLTMM*SIGFPGISTKIPLV Trigger: CACAAGGGGTATCTTGGTACTGATACCTGGAAACCCTATGCTCAACATCATTGTCAGCACTTTCATATTTGTTTGTGTGGCACATGAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000297273.9 ENST00000471944.5 ENST00000489196.1 |
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| CDS TCA 72 bp | TTCCGTGGAAAACTACATAACGGTCTAACCTCCATCTaGACCACCATTCATATACATTCCCTTTCAGTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: FRGKLHNGLTSI*TTIHIHSLSVQ Trigger: TTGAACTGAAAGGGAATGTATATGAATGGTGGTTCAGATGGAGGTTAGACCGTTATGTAGTTTTCCACGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS GCA 72 bp | TCTACCCAAACTGGATTTCTCAACACATGGTCGGTATaGTGCATACCAATGAACATTTTAAGTAGTACATGG | + |
|
Preference number: 6 (lower is better) Translates to: STQTGFLNTWSV*CIPMNILSSTW Trigger: CCATGTACTACTTAAAATGTTCATTGGTATGCAGCATACCGACCATGTGTTGAGAAATCCAGTTTGGGTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489196.1 |
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| CDS CCA 72 bp | ATATACATTCCCTTTCAGTTCAAAACACTTGGACAATaGCCAAAGAGAAAAGATCTTCTCAAATGCACCCTG | + |
|
Preference number: 6 (lower is better) Translates to: IYIPFQFKTLGQ*PKRKDLLKCTL Trigger: CAGGGTGCATTTGAGAAGATCTTTTCTCTTTGGCCATTGTCCAAGTGTTTTGAACTGAAAGGGAATGTATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297273.9 |
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| CDS CCA 72 bp | GTTCTAAAGTCTACCCAAACTGGATTTCTCAACACATaGTCGGTATGCTGCATACCAATGAACATTTTAAGT | + |
|
Preference number: 6 (lower is better) Translates to: VLKSTQTGFLNT*SVCCIPMNILS Trigger: ACTTAAAATGTTCATTGGTATGCAGCATACCGACCATGTGTTGAGAAATCCAGTTTGGGTAGACTTTAGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489196.1 |
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