Pregenerated sensors for CARTPT (Homo sapiens)
Ensembl gene IDs: ENSG00000164326Ensembl transcript IDs: ENST00000296777.5, ENST00000513096.1
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CGTATCAACACCATACAAGGCATTATTCTTCACACAGTAACATCTAATGTGTTCAGGGATGGGGATGTATaGAGGAGAATGGACGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: RINTIQGIILHTVTSNVFRDGDV*RRMDAP Trigger: AGGGGCGTCCATTCTCCTCCATACATCCCCATCCCT...GAACACATTAGATGTTACTGTGTGAAGAATAATGCCTTGTATGGTGTTGATACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296777.5 |
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| 3UTR-3UTR CCA 90 bp | GAAAATAAAAACTTTATCTGTTGCTTAAGCCAAACTCCAGGGAGGAAGGTGTGGGGGAAAGTAGAGGGATaGGGATGTATGGAGGAGAAT | + |
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Preference number: 2 (lower is better) Translates to: ENKNFICCLSQTPGRKVWGKVEG*GCMEEN Trigger: ATTCTCCTCCATACATCCCCATCCCTCTACTTTCCC...CCACACCTTCCTCCCTGGAGTTTGGCTTAAGCAACAGATAAAGTTTTTATTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000296777.5 |
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| CDS-3UTR CCA 90 bp | AATAAAAACTTTATCTGTTGCTTAAGCCAAACTCCAGGGAGGAAGGTGTGGTCCTCCAGGGCTCGGGGCTaGAGCTCGGCGTCCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: NKNFICCLSQTPGRKVWSSRARG*SSASSW Trigger: CCAGGAGGACGCCGAGCTCCAGCCCCGAGCCCTGGA...GGACCACACCTTCCTCCCTGGAGTTTGGCTTAAGCAACAGATAAAGTTTTTATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296777.5 |
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| CDS-3UTR GCA 90 bp | GAAAATAAAAACTTTATCTGTTGCTTAAGCCAAACTCCAGGGAGGAAGGTGTGGTGCCCCTTTCCTCACTaGACACTGCTCACCGGCGTC | + |
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Preference number: 4 (lower is better) Translates to: ENKNFICCLSQTPGRKVWCPFPH*TLLTGV Trigger: GACGCCGGTGAGCAGTGTGCAGTGAGGAAAGGGGCA...CCACACCTTCCTCCCTGGAGTTTGGCTTAAGCAACAGATAAAGTTTTTATTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000296777.5 |
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| CDS-3UTR CCA 90 bp | ACTTCACACACGTATCAACACCATACAAGGCATTATTCTTCACACAGTAACATCAGCTCGGCGTCCTCCTaGGCACGGGTACCCAACAGA | + |
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Preference number: 4 (lower is better) Translates to: TSHTYQHHTRHYSSHSNISSASS*ARVPNR Trigger: TCTGTTGGGTACCCGTGCCCAGGAGGACGCCGAGCT...GATGTTACTGTGTGAAGAATAATGCCTTGTATGGTGTTGATACGTGTGTGAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296777.5 |
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| CDS-3UTR CCA 90 bp | AATAAAAACTTTATCTGTTGCTTAAGCCAAACTCCAGGGAGGAAGGTGTGGTCCAGGGATGGGGATGTATaGAGGAGAATGGACGCCCCT | + |
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Preference number: 4 (lower is better) Translates to: NKNFICCLSQTPGRKVWSRDGDV*RRMDAP Trigger: AGGGGCGTCCATTCTCCTCCATACATCCCCATCCCT...GGACCACACCTTCCTCCCTGGAGTTTGGCTTAAGCAACAGATAAAGTTTTTATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000296777.5 |
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| CDS-3UTR GCA 90 bp | GAAAATAAAAACTTTATCTGTTGCTTAAGCCAAACTCCAGGGAGGAAGGTGTGGTTCCTCACTGCACACTaGTCACCGGCGTCACACATG | + |
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Preference number: 4 (lower is better) Translates to: ENKNFICCLSQTPGRKVWFLTAH*SPASHM Trigger: CATGTGTGACGCCGGTGAGCAGTGTGCAGTGAGGAA...CCACACCTTCCTCCCTGGAGTTTGGCTTAAGCAACAGATAAAGTTTTTATTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296777.5 |
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| CDS-3UTR GCA 90 bp | GAAAATAAAAACTTTATCTGTTGCTTAAGCCAAACTCCAGGGAGGAAGGTGTGGTCAGGAGGAAGGAATTaGAGGAGGTTCCTCGGGGAC | + |
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Preference number: 4 (lower is better) Translates to: ENKNFICCLSQTPGRKVWSGGRN*RRFLGD Trigger: GTCCCCGAGGAACCTCCTGCAATTCCTTCCTCCTGA...CCACACCTTCCTCCCTGGAGTTTGGCTTAAGCAACAGATAAAGTTTTTATTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000296777.5 |
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| CDS-3UTR CCA 90 bp | GAAAATAAAAACTTTATCTGTTGCTTAAGCCAAACTCCAGGGAGGAAGGTGTGGATCAGCTCCTTCTCGTaGGAGGCATCATCCACGGCA | + |
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Preference number: 4 (lower is better) Translates to: ENKNFICCLSQTPGRKVWISSFS*EASSTA Trigger: TGCCGTGGATGATGCCTCCCACGAGAAGGAGCTGAT...CCACACCTTCCTCCCTGGAGTTTGGCTTAAGCAACAGATAAAGTTTTTATTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296777.5 |
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| CDS-3UTR CCA 90 bp | ACTTCACACACGTATCAACACCATACAAGGCATTATTCTTCACACAGTAACATCCACCGGCGTCACACATaGGGACTTGGCCATACTTCT | + |
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Preference number: 4 (lower is better) Translates to: TSHTYQHHTRHYSSHSNIHRRHT*GLGHTS Trigger: AGAAGTATGGCCAAGTCCCCATGTGTGACGCCGGTG...GATGTTACTGTGTGAAGAATAATGCCTTGTATGGTGTTGATACGTGTGTGAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296777.5 |
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| CDS-3UTR CCA 90 bp | AATAAAAACTTTATCTGTTGCTTAAGCCAAACTCCAGGGAGGAAGGTGTGGTCCGGGAAAGTAGAGGGATaGGGATGTATGGAGGAGAAT | + |
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Preference number: 4 (lower is better) Translates to: NKNFICCLSQTPGRKVWSGKVEG*GCMEEN Trigger: ATTCTCCTCCATACATCCCCATCCCTCTACTTTCCC...GGACCACACCTTCCTCCCTGGAGTTTGGCTTAAGCAACAGATAAAGTTTTTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296777.5 |
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| CDS-3UTR GCA 90 bp | GAAAATAAAAACTTTATCTGTTGCTTAAGCCAAACTCCAGGGAGGAAGGTGTGGTTCTTCAAGACTTCTTaGAGCGCTTCGATCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: ENKNFICCLSQTPGRKVWFFKTS*SASISS Trigger: GGAGCTGATCGAAGCGCTGCAAGAAGTCTTGAAGAA...CCACACCTTCCTCCCTGGAGTTTGGCTTAAGCAACAGATAAAGTTTTTATTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296777.5 |
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| CDS-3UTR CCA 90 bp | ATAAGAATACTTCACACACGTATCAACACCATACAAGGCATTATTCTTCACACACCAGGGAGGAAGGTGTaGTCCTCTGGGGAAAGTAGA | + |
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Preference number: 4 (lower is better) Translates to: IRILHTRINTIQGIILHTPGRKV*SSGESR Trigger: TCTACTTTCCCCAGAGGACCACACCTTCCTCCCTGG...TGTGTGAAGAATAATGCCTTGTATGGTGTTGATACGTGTGTGAAGTATTCTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296777.5 |
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| CDS-3UTR CCA 90 bp | ATAAGAATACTTCACACACGTATCAACACCATACAAGGCATTATTCTTCACACAATGTATGGAGGAGAATaGACGCCCCTTCATAAGCAC | + |
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Preference number: 4 (lower is better) Translates to: IRILHTRINTIQGIILHTMYGGE*TPLHKH Trigger: GTGCTTATGAAGGGGCGTCCATTCTCCTCCATACAT...TGTGTGAAGAATAATGCCTTGTATGGTGTTGATACGTGTGTGAAGTATTCTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296777.5 |
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| CDS-3UTR TCA 90 bp | ACTTCACACACGTATCAACACCATACAAGGCATTATTCTTCACACAGTAACATCGAACACGTTTACTCTTaGGCTTCTTCAAGACTTCTT | + |
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Preference number: 4 (lower is better) Translates to: TSHTYQHHTRHYSSHSNIEHVYS*ASSRLL Trigger: AAGAAGTCTTGAAGAAGCTCAAGAGTAAACGTGTTC...GATGTTACTGTGTGAAGAATAATGCCTTGTATGGTGTTGATACGTGTGTGAAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296777.5 |
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| CDS-3UTR GCA 90 bp | ACTTCACACACGTATCAACACCATACAAGGCATTATTCTTCACACAGTAACATCAAAAACTTTATCTGTTaGTTAAGCCAAACTCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: TSHTYQHHTRHYSSHSNIKNFIC*LSQTPG Trigger: CCCTGGAGTTTGGCTTAAGCAACAGATAAAGTTTTT...GATGTTACTGTGTGAAGAATAATGCCTTGTATGGTGTTGATACGTGTGTGAAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296777.5 |
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| CDS CCA 90 bp | CGGACCCACACGCACTCTGCGGTGGGACTCCGCGGACACAGGGAATaGTCGAGGGGTGGAAACTTAGCGGACGCTGTCCCAGGTACTGAC | + |
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Preference number: 5 (lower is better) Translates to: RTHTHSAVGLRGHRE*SRGGNLADAVPGTD Trigger: GTCAGTACCTGGGACAGCGTCCGCTAAGTTTCCACCCCTCGACCATTCCCTGTGTCCGCGGAGTCCCACCGCAGAGTGCGTGTGGGTCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000513096.1 |
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| CDS TCA 90 bp | AGACTTCTTGCAGCGCTTCGATCTGCAACACACCGCTTCGGAGCCTaGAGTTGCCGCCTTGGCTGCGAGCCCAGCCCAGGTGCGCACTTC | + |
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Preference number: 5 (lower is better) Translates to: RLLAALRSATHRFGA*SCRLGCEPSPGAHF Trigger: GAAGTGCGCACCTGGGCTGGGCTCGCAGCCAAGGCGGCAACTTCAGGCTCCGAAGCGGTGTGTTGCAGATCGAAGCGCTGCAAGAAGTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513096.1 |
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| CDS CCA 90 bp | GCTTCGATCTGCAACACACCGCTTCGGAGCCTGAAGTTGCCGCCTTaGCTGCGAGCCCAGCCCAGGTGCGCACTTCCAGCCCTAGTTATA | + |
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Preference number: 5 (lower is better) Translates to: ASICNTPLRSLKLPP*LRAQPRCALPALVI Trigger: TATAACTAGGGCTGGAAGTGCGCACCTGGGCTGGGCTCGCAGCCAAGGCGGCAACTTCAGGCTCCGAAGCGGTGTGTTGCAGATCGAAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513096.1 |
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| CDS GCA 90 bp | ATTGCAGGAGGTTCCTCGGGGACAGTCACACAGCTTCCCGATCCTTaGCCCTTTCCTCACTGCACACTGCTCACCGGCGTCACACATGGG | + |
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Preference number: 5 (lower is better) Translates to: IAGGSSGTVTQLPDP*PFPHCTLLTGVTHG Trigger: CCCATGTGTGACGCCGGTGAGCAGTGTGCAGTGAGGAAAGGGGCAAGGATCGGGAAGCTGTGTGACTGTCCCCGAGGAACCTCCTGCAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000296777.5 ENST00000513096.1 |
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| CDS GCA 90 bp | GAGGAGAATGGACGCCCCTTCATAAGCACTTCAGGAGGAAGGAATTaGAGGAGGTTCCTCGGGGACAGTCACACAGCTTCCCGATCCTTG | + |
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Preference number: 5 (lower is better) Translates to: EENGRPFISTSGGRN*RRFLGDSHTASRSL Trigger: CAAGGATCGGGAAGCTGTGTGACTGTCCCCGAGGAACCTCCTGCAATTCCTTCCTCCTGAAGTGCTTATGAAGGGGCGTCCATTCTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000296777.5 ENST00000513096.1 |
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| CDS GCA 90 bp | CGTTTACTCTTGAGCTTCTTCAAGACTTCTTGCAGCGCTTCGATCTaGAACACACCGCTTCGGAGCCTGAAGTTGCCGCCTTGGCTGCGA | + |
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Preference number: 5 (lower is better) Translates to: RLLLSFFKTSCSASI*NTPLRSLKLPPWLR Trigger: TCGCAGCCAAGGCGGCAACTTCAGGCTCCGAAGCGGTGTGTTGCAGATCGAAGCGCTGCAAGAAGTCTTGAAGAAGCTCAAGAGTAAACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513096.1 |
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| CDS CCA 90 bp | AAACTCCAGGGAGGAAGGTGTGGTCCTCTGGGGAAAGTAGAGGGATaGGGATGTATGGAGGAGAATGGACGCCCCTTCATAAGCACTTCA | + |
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Preference number: 5 (lower is better) Translates to: KLQGGRCGPLGKVEG*GCMEENGRPFISTS Trigger: TGAAGTGCTTATGAAGGGGCGTCCATTCTCCTCCATACATCCCCATCCCTCTACTTTCCCCAGAGGACCACACCTTCCTCCCTGGAGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000296777.5 ENST00000513096.1 |
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| CDS-3UTR CAA 90 bp | AGAATACTTCACACACGTATCAACACCATACAAGGCATTATTCTTCACACAGTACTTCTTCAAGACTTCTaGCAGCGCTTCGATCAGCTC | + |
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Preference number: 5 (lower is better) Translates to: RILHTRINTIQGIILHTVLLQDF*QRFDQL Trigger: GAGCTGATCGAAGCGCTGCAAGAAGTCTTGAAGAAG...TACTGTGTGAAGAATAATGCCTTGTATGGTGTTGATACGTGTGTGAAGTATTCT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296777.5 |
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| CDS-3UTR CAA 90 bp | AATAAAAACTTTATCTGTTGCTTAAGCCAAACTCCAGGGAGGAAGGTGTGGTCCGGAACACGTTTACTCTaGAGCTTCTTCAAGACTTCT | + |
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Preference number: 5 (lower is better) Translates to: NKNFICCLSQTPGRKVWSGTRLL*SFFKTS Trigger: AGAAGTCTTGAAGAAGCTCAAGAGTAAACGTGTTCC...GGACCACACCTTCCTCCCTGGAGTTTGGCTTAAGCAACAGATAAAGTTTTTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296777.5 |
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| CDS-3UTR CAA 90 bp | CTTCACACACGTATCAACACCATACAAGGCATTATTCTTCACACAGTAACATCTGTCACACATGGGGACTaGGCCATACTTCTTCTCATA | + |
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Preference number: 5 (lower is better) Translates to: LHTRINTIQGIILHTVTSVTHGD*AILLLI Trigger: TATGAGAAGAAGTATGGCCAAGTCCCCATGTGTGAC...AGATGTTACTGTGTGAAGAATAATGCCTTGTATGGTGTTGATACGTGTGTGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296777.5 |
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| CDS CCA 72 bp | TGCAACACACCGCTTCGGAGCCTGAAGTTGCCGCCTTaGCTGCGAGCCCAGCCCAGGTGCGCACTTCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: CNTPLRSLKLPP*LRAQPRCALPA Trigger: GGCTGGAAGTGCGCACCTGGGCTGGGCTCGCAGCCAAGGCGGCAACTTCAGGCTCCGAAGCGGTGTGTTGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513096.1 |
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| CDS CAA 72 bp | CTGCAACACACCGCTTCGGAGCCTGAAGTTGCCGCCTaGGCTGCGAGCCCAGCCCAGGTGCGCACTTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: LQHTASEPEVAA*AASPAQVRTSS Trigger: GCTGGAAGTGCGCACCTGGGCTGGGCTCGCAGCCAAGGCGGCAACTTCAGGCTCCGAAGCGGTGTGTTGCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513096.1 |
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| CDS TCA 72 bp | GAGGGGTGGAAACTTAGCGGACGCTGTCCCAGGTACTaGCCGCGGGTCTCTGAGCCGCTGGGGTCCCTGTTG | + |
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Preference number: 6 (lower is better) Translates to: EGWKLSGRCPRY*PRVSEPLGSLL Trigger: CAACAGGGACCCCAGCGGCTCAGAGACCCGCGGTCAGTACCTGGGACAGCGTCCGCTAAGTTTCCACCCCTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000513096.1 |
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| CDS TCA 72 bp | GCAGCGCTTCGATCTGCAACACACCGCTTCGGAGCCTaGAGTTGCCGCCTTGGCTGCGAGCCCAGCCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: AALRSATHRFGA*SCRLGCEPSPG Trigger: ACCTGGGCTGGGCTCGCAGCCAAGGCGGCAACTTCAGGCTCCGAAGCGGTGTGTTGCAGATCGAAGCGCTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513096.1 |
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| CDS CCA 72 bp | GTTATAAGGAGCCCCGGACCCACACGCACTCTGCGGTaGGACTCCGCGGACACAGGGAATGGTCGAGGGGTG | + |
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Preference number: 6 (lower is better) Translates to: VIRSPGPTRTLR*DSADTGNGRGV Trigger: CACCCCTCGACCATTCCCTGTGTCCGCGGAGTCCCACCGCAGAGTGCGTGTGGGTCCGGGGCTCCTTATAAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000513096.1 |
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| CDS GCA 72 bp | CTGAAGTTGCCGCCTTGGCTGCGAGCCCAGCCCAGGTaGGCACTTCCAGCCCTAGTTATAAGGAGCCCCGGA | + |
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Preference number: 6 (lower is better) Translates to: LKLPPWLRAQPR*ALPALVIRSPG Trigger: TCCGGGGCTCCTTATAACTAGGGCTGGAAGTGCGCACCTGGGCTGGGCTCGCAGCCAAGGCGGCAACTTCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000513096.1 |
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| CDS CCA 72 bp | ACGCACTCTGCGGTGGGACTCCGCGGACACAGGGAATaGTCGAGGGGTGGAAACTTAGCGGACGCTGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: THSAVGLRGHRE*SRGGNLADAVP Trigger: TGGGACAGCGTCCGCTAAGTTTCCACCCCTCGACCATTCCCTGTGTCCGCGGAGTCCCACCGCAGAGTGCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000513096.1 |
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| CDS CAA 90 bp | CGCTTCGATCTGCAACACACCGCTTCGGAGCCTGAAGTTGCCGCCTaGGCTGCGAGCCCAGCCCAGGTGCGCACTTCCAGCCCTAGTTAT | + |
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Preference number: 6 (lower is better) Translates to: RFDLQHTASEPEVAA*AASPAQVRTSSPSY Trigger: ATAACTAGGGCTGGAAGTGCGCACCTGGGCTGGGCTCGCAGCCAAGGCGGCAACTTCAGGCTCCGAAGCGGTGTGTTGCAGATCGAAGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513096.1 |
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| CDS GCA 72 bp | GTCACACAGCTTCCCGATCCTTGCCCCTTTCCTCACTaGACACTGCTCACCGGCGTCACACATGGGGACTTG | + |
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Preference number: 6 (lower is better) Translates to: VTQLPDPCPFPH*TLLTGVTHGDL Trigger: CAAGTCCCCATGTGTGACGCCGGTGAGCAGTGTGCAGTGAGGAAAGGGGCAAGGATCGGGAAGCTGTGTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000296777.5 ENST00000513096.1 |
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| CDS GCA 72 bp | GGACGCCCCTTCATAAGCACTTCAGGAGGAAGGAATTaGAGGAGGTTCCTCGGGGACAGTCACACAGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: GRPFISTSGGRN*RRFLGDSHTAS Trigger: GGAAGCTGTGTGACTGTCCCCGAGGAACCTCCTGCAATTCCTTCCTCCTGAAGTGCTTATGAAGGGGCGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000296777.5 ENST00000513096.1 |
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| CDS CAA 90 bp | GGAGGAGAATGGACGCCCCTTCATAAGCACTTCAGGAGGAAGGAATaGCAGGAGGTTCCTCGGGGACAGTCACACAGCTTCCCGATCCTT | + |
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Preference number: 6 (lower is better) Translates to: GGEWTPLHKHFRRKE*QEVPRGQSHSFPIL Trigger: AAGGATCGGGAAGCTGTGTGACTGTCCCCGAGGAACCTCCTGCAATTCCTTCCTCCTGAAGTGCTTATGAAGGGGCGTCCATTCTCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000296777.5 ENST00000513096.1 |
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| CDS CCA 72 bp | GGAGGAAGGTGTGGTCCTCTGGGGAAAGTAGAGGGATaGGGATGTATGGAGGAGAATGGACGCCCCTTCATA | + |
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Preference number: 6 (lower is better) Translates to: GGRCGPLGKVEG*GCMEENGRPFI Trigger: TATGAAGGGGCGTCCATTCTCCTCCATACATCCCCATCCCTCTACTTTCCCCAGAGGACCACACCTTCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000296777.5 ENST00000513096.1 |
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| CDS GCA 72 bp | TTGAGCTTCTTCAAGACTTCTTGCAGCGCTTCGATCTaGAACACACCGCTTCGGAGCCTGAAGTTGCCGCCT | + |
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Preference number: 6 (lower is better) Translates to: LSFFKTSCSASI*NTPLRSLKLPP Trigger: AGGCGGCAACTTCAGGCTCCGAAGCGGTGTGTTGCAGATCGAAGCGCTGCAAGAAGTCTTGAAGAAGCTCAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513096.1 |
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| CDS CAA 72 bp | GGGAACACGTTTACTCTTGAGCTTCTTCAAGACTTCTaGCAGCGCTTCGATCAGCTCCTTCTCGTGGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: GNTFTLELLQDF*QRFDQLLLVGG Trigger: GCCTCCCACGAGAAGGAGCTGATCGAAGCGCTGCAAGAAGTCTTGAAGAAGCTCAAGAGTAAACGTGTTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296777.5 |
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| CDS CAA 72 bp | GGGAACACGTTTACTCTTGAGCTTCTTCAAGACTTCTaGCAGCGCTTCGATCTGCAACACACCGCTTCGGAG | + |
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Preference number: 6 (lower is better) Translates to: GNTFTLELLQDF*QRFDLQHTASE Trigger: CTCCGAAGCGGTGTGTTGCAGATCGAAGCGCTGCAAGAAGTCTTGAAGAAGCTCAAGAGTAAACGTGTTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513096.1 |
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| CDS CAA 90 bp | CTCATAGATGGGAACACGTTTACTCTTGAGCTTCTTCAAGACTTCTaGCAGCGCTTCGATCTGCAACACACCGCTTCGGAGCCTGAAGTT | + |
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Preference number: 6 (lower is better) Translates to: LIDGNTFTLELLQDF*QRFDLQHTASEPEV Trigger: AACTTCAGGCTCCGAAGCGGTGTGTTGCAGATCGAAGCGCTGCAAGAAGTCTTGAAGAAGCTCAAGAGTAAACGTGTTCCCATCTATGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513096.1 |
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