RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CAPN14 (Homo sapiens)

Ensembl gene IDs: ENSG00000214711

Ensembl transcript IDs: ENST00000398824.6, ENST00000403897.4

Found 406 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCGGCACCTGTGCCTGGGCTTCTGGAGCAGGGACACCAGCACGCTaGAGGGCCTCAGGGATCTCCTGCCCTCCTCGGGCCTCCAGACAG +
Preference number: 1 (lower is better)
Translates to: CGTCAWASGAGTPAR*RASGISCPPRASRQ
Trigger: CTGTCTGGAGGCCCGAGGAGGGCAGGAGATCCCTGAGGCCCTGCAGCGTGCTGGTGTCCCTGCTCCAGAAGCCCAGGCACAGGTGCCGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR CCA 90 bp AGAAGCCAATGGCGAGGAGAGGCTTCCGCTTGCGGCACCTGTGCCTaGGCTTCTGGAGCAGGGACACCAGCACGCTGCAGGGCCTCAGGG +
Preference number: 1 (lower is better)
Translates to: RSQWRGEASACGTCA*ASGAGTPARCRASG
Trigger: CCCTGAGGCCCTGCAGCGTGCTGGTGTCCCTGCTCCAGAAGCCCAGGCACAGGTGCCGCAAGCGGAAGCCTCTCCTCGCCATTGGCTTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR GCA 90 bp TCATCCTATACAGGTAGAAGCCAATGGCGAGGAGAGGCTTCCGCTTaGGGCACCTGTGCCTGGGCTTCTGGAGCAGGGACACCAGCACGC +
Preference number: 1 (lower is better)
Translates to: SSYTGRSQWRGEASA*GTCAWASGAGTPAR
Trigger: GCGTGCTGGTGTCCCTGCTCCAGAAGCCCAGGCACAGGTGCCGCAAGCGGAAGCCTCTCCTCGCCATTGGCTTCTACCTGTATAGGATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR CCA 90 bp CATCTCCCCTCCCGCATGGTGTACGTCCACTTCTGGGCCGCCTCCTaGCTCAACAGGCCTGGGGTCAGTTTACAGATAACCAGGAGCACG +
Preference number: 1 (lower is better)
Translates to: HLPSRMVYVHFWAAS*LNRPGVSLQITRST
Trigger: CGTGCTCCTGGTTATCTGTAAACTGACCCCAGGCCTGTTGAGCCAGGAGGCGGCCCAGAAGTGGACGTACACCATGCGGGAGGGGAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR CCA 90 bp CTCCGCTTCTCCCATCTCCCCTCCCGCATGGTGTACGTCCACTTCTaGGCCGCCTCCTGGCTCAACAGGCCTGGGGTCAGTTTACAGATA +
Preference number: 1 (lower is better)
Translates to: LRFSHLPSRMVYVHF*AASWLNRPGVSLQI
Trigger: TATCTGTAAACTGACCCCAGGCCTGTTGAGCCAGGAGGCGGCCCAGAAGTGGACGTACACCATGCGGGAGGGGAGATGGGAGAAGCGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR GCA 90 bp TCTTCCAAAATGTGTCCTGCAGCAACTGCCTCTGGCCACCAGCTGTaGTCCGCTTCTCCCATCTCCCCTCCCGCATGGTGTACGTCCACT +
Preference number: 1 (lower is better)
Translates to: SSKMCPAATASGHQL*SASPISPPAWCTST
Trigger: AGTGGACGTACACCATGCGGGAGGGGAGATGGGAGAAGCGGAGCACAGCTGGTGGCCAGAGGCAGTTGCTGCAGGACACATTTTGGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR GCA 90 bp CTTCCTCCCTTCCCTTTCTGCATGCTGGCCATGCACGGGGAGGGCTaGAGAAGAGAAACCTTCCCAGCTGAGAAGGTGACGGCTAGTGAG +
Preference number: 1 (lower is better)
Translates to: LPPFPFCMLAMHGEG*RRETFPAEKVTASE
Trigger: CTCACTAGCCGTCACCTTCTCAGCTGGGAAGGTTTCTCTTCTGCAGCCCTCCCCGTGCATGGCCAGCATGCAGAAAGGGAAGGGAGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
3UTR GCA 90 bp TCATCACTGAGCATGATTCCTGCCTCCCTCATGGCAGCGTGCAGCTaGTCCCAGTTCAGGTATCCTGACCCACGGTCTTGCTTGTGGAAA +
Preference number: 1 (lower is better)
Translates to: SSLSMIPASLMAACS*SQFRYPDPRSCLWK
Trigger: TTTCCACAAGCAAGACCGTGGGTCAGGATACCTGAACTGGGAGCAGCTGCACGCTGCCATGAGGGAGGCAGGAATCATGCTCAGTGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR TCA 90 bp CCAGATCCAATCATACGGAGATATTGTCAGAAGAAGACTACCCCATaGCCTCAGATGCCAGAGCCAGCCCACCCCACCTGGACTCTGCCA +
Preference number: 1 (lower is better)
Translates to: PDPIIRRYCQKKTTP*PQMPEPAHPTWTLP
Trigger: TGGCAGAGTCCAGGTGGGGTGGGCTGGCTCTGGCATCTGAGGTCATGGGGTAGTCTTCTTCTGACAATATCTCCGTATGATTGGATCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
3UTR GCA 90 bp GTAGGTGGCTTCGATGAGGATGTCCCAGAGGTTGCCATGGGCTTCTaGCAGGTTGATGGTCATTGTCACCCCTCCAGTGAAGTCTACAAG +
Preference number: 1 (lower is better)
Translates to: VGGFDEDVPEVAMGF*QVDGHCHPSSEVYK
Trigger: CTTGTAGACTTCACTGGAGGGGTGACAATGACCATCAACCTGGCAGAAGCCCATGGCAACCTCTGGGACATCCTCATCGAAGCCACCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR CCA 90 bp TCTGGTCATCATGGTACTTGTTCATCCTATACAGGTAGAAGCCAATaGCGAGGAGAGGCTTCCGCTTGCGGCACCTGTGCCTGGGCTTCT +
Preference number: 1 (lower is better)
Translates to: SGHHGTCSSYTGRSQ*RGEASACGTCAWAS
Trigger: AGAAGCCCAGGCACAGGTGCCGCAAGCGGAAGCCTCTCCTCGCCATTGGCTTCTACCTGTATAGGATGAACAAGTACCATGATGACCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR CCA 90 bp CTCATAGTACCTGATGCATTAAGGTCCAGTAAGGCCAGGATCCCCTaGCAGGCTTCCAGGCTAAAGAAGGGCTGTCTGCTCCCCAGACTT +
Preference number: 1 (lower is better)
Translates to: LIVPDALRSSKARIP*QASRLKKGCLLPRL
Trigger: AAGTCTGGGGAGCAGACAGCCCTTCTTTAGCCTGGAAGCCTGCCAGGGGATCCTGGCCTTACTGGACCTTAATGCATCAGGTACTATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR TCA 90 bp ATGCAGGGCACGATGAGGTACGTCCCTGGTTCCAGACACAGCTCCTaGCTCACTTCTTTCTCCTTGAGAAACCTATCAGGCTGGCTCAGA +
Preference number: 1 (lower is better)
Translates to: MQGTMRYVPGSRHSS*LTSFSLRNLSGWLR
Trigger: TCTGAGCCAGCCTGATAGGTTTCTCAAGGAGAAAGAAGTGAGTCAGGAGCTGTGTCTGGAACCAGGGACGTACCTCATCGTGCCCTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR GCA 90 bp TCATACGGAGATATTGTCAGAAGAAGACTACCCCATGACCTCAGATaGCAGAGCCAGCCCACCCCACCTGGACTCTGCCAATTCTCTTAC +
Preference number: 1 (lower is better)
Translates to: SYGDIVRRRLPHDLR*QSQPTPPGLCQFSY
Trigger: GTAAGAGAATTGGCAGAGTCCAGGTGGGGTGGGCTGGCTCTGGCATCTGAGGTCATGGGGTAGTCTTCTTCTGACAATATCTCCGTATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
3UTR CCA 90 bp CATGGTGTACGTCCACTTCTGGGCCGCCTCCTGGCTCAACAGGCCTaGGGTCAGTTTACAGATAACCAGGAGCACGAAATGTGTTTTAAA +
Preference number: 1 (lower is better)
Translates to: HGVRPLLGRLLAQQA*GQFTDNQEHEMCFK
Trigger: TTTAAAACACATTTCGTGCTCCTGGTTATCTGTAAACTGACCCCAGGCCTGTTGAGCCAGGAGGCGGCCCAGAAGTGGACGTACACCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR TCA 90 bp AGCTACGCTTTCAAAGTGCTCCTTTCTTCTGGTACAGTACCCATCTaGCAGGTGCTCAAATCTCCTTTAGTCCTCTGCCAATGGACACAC +
Preference number: 1 (lower is better)
Translates to: SYAFKVLLSSGTVPI*QVLKSPLVLCQWTH
Trigger: GTGTGTCCATTGGCAGAGGACTAAAGGAGATTTGAGCACCTGTCAGATGGGTACTGTACCAGAAGAAAGGAGCACTTTGAAAGCGTAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
3UTR CCA 90 bp AGAATTCTCCGTCATTGTCTTTCCTCAGAAGCAGAATCTTCTCCTTaGGGCTCAGCAGCTCCCATTTACTTGAACTGTCACTCCAGTCTC +
Preference number: 1 (lower is better)
Translates to: RILRHCLSSEAESSP*GSAAPIYLNCHSSL
Trigger: GAGACTGGAGTGACAGTTCAAGTAAATGGGAGCTGCTGAGCCCCAAGGAGAAGATTCTGCTTCTGAGGAAAGACAATGACGGAGAATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR CCA 90 bp ATGCTTAGGCCATGTCAGGTAACATCTCCGCTTGTGACAAGGTTGTaGCCTCAGGGAAGGATGGCTAGCTTTTACAAATCTGATGTAATC +
Preference number: 1 (lower is better)
Translates to: MLRPCQVTSPLVTRL*PQGRMASFYKSDVI
Trigger: GATTACATCAGATTTGTAAAAGCTAGCCATCCTTCCCTGAGGCCACAACCTTGTCACAAGCGGAGATGTTACCTGACATGGCCTAAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
3UTR GCA 90 bp ACAGTGCCATCATCATCCACTCTGGCTTCTGGAGGTATATCCCTTTaGCATCTTGGGTTAAGTTTTGGAAGACATCCTCCATGTTCTCTA +
Preference number: 1 (lower is better)
Translates to: TVPSSSTLASGGISL*HLGLSFGRHPPCSL
Trigger: TAGAGAACATGGAGGATGTCTTCCAAAACTTAACCCAAGATGGCAAAGGGATATACCTCCAGAAGCCAGAGTGGATGATGATGGCACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR CCA 90 bp ACTTTCCTACCCCATAAGCTACGCTTTCAAAGTGCTCCTTTCTTCTaGTACAGTACCCATCTGACAGGTGCTCAAATCTCCTTTAGTCCT +
Preference number: 1 (lower is better)
Translates to: TFLPHKLRFQSAPFF*YSTHLTGAQISFSP
Trigger: AGGACTAAAGGAGATTTGAGCACCTGTCAGATGGGTACTGTACCAGAAGAAAGGAGCACTTTGAAAGCGTAGCTTATGGGGTAGGAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
3UTR GCA 90 bp AGCAGGAAGCCCTTTGAGAACTCAGGTGTTTTAAATCTACTAGGTTaGCCCAGATCCAATCATACGGAGATATTGTCAGAAGAAGACTAC +
Preference number: 1 (lower is better)
Translates to: SRKPFENSGVLNLLG*PRSNHTEILSEEDY
Trigger: GTAGTCTTCTTCTGACAATATCTCCGTATGATTGGATCTGGGGCAACCTAGTAGATTTAAAACACCTGAGTTCTCAAAGGGCTTCCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
3UTR TCA 90 bp ATGTCTAAGGATATATCATTCCCATTTCAGACCTTAAAACCTAGATaGTTACCCCACCATGTGAGAACATGTGGCATGTCTAAAGTCACT +
Preference number: 1 (lower is better)
Translates to: MSKDISFPFQTLKPR*LPHHVRTCGMSKVT
Trigger: AGTGACTTTAGACATGCCACATGTTCTCACATGGTGGGGTAATCATCTAGGTTTTAAGGTCTGAAATGGGAATGATATATCCTTAGACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
3UTR-3UTR CCA 90 bp GAGGCGGGGGCCGCCGTAGCGGATGAGCATCAGCTGACAGACGTCATCACTGAGTGCGGCACCTGTGCCTaGGCTTCTGGAGCAGGGACA +
Preference number: 2 (lower is better)
Translates to: EAGAAVADEHQLTDVITECGTCA*ASGAGT
Trigger: TGTCCCTGCTCCAGAAGCCCAGGCACAGGTGCCGCA...CTCAGTGATGACGTCTGTCAGCTGATGCTCATCCGCTACGGCGGCCCCCGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR-3UTR CCA 90 bp CTGGAGGCGGGGGCCGCCGTAGCGGATGAGCATCAGCTGACAGACGTCATCACTAAGGCCAGGATCCCCTaGCAGGCTTCCAGGCTAAAG +
Preference number: 2 (lower is better)
Translates to: LEAGAAVADEHQLTDVITKARIP*QASRLK
Trigger: CTTTAGCCTGGAAGCCTGCCAGGGGATCCTGGCCTT...AGTGATGACGTCTGTCAGCTGATGCTCATCCGCTACGGCGGCCCCCGCCTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR-3UTR TCA 90 bp CTGGGCTTCTGGAGCAGGGACACCAGCACGCTGCAGGGCCTCAGGGATCTCCTGTTGTCACCCCTCCAGTaGAGTCTACAAGGGCTTCAG +
Preference number: 2 (lower is better)
Translates to: LGFWSRDTSTLQGLRDLLLSPLQ*SLQGLQ
Trigger: CTGAAGCCCTTGTAGACTTCACTGGAGGGGTGACAA...CAGGAGATCCCTGAGGCCCTGCAGCGTGCTGGTGTCCCTGCTCCAGAAGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR-3UTR CCA 90 bp GTGGGCATGGGTTGGTCTCAGCCAAAGGCTGCTCTTGGGCCACATGCAGAGTCTATCTCCCCTCCCGCATaGTGTACGTCCACTTCTGGG +
Preference number: 2 (lower is better)
Translates to: VGMGWSQPKAALGPHAESISPPA*CTSTSG
Trigger: CCCAGAAGTGGACGTACACCATGCGGGAGGGGAGAT...AGACTCTGCATGTGGCCCAAGAGCAGCCTTTGGCTGAGACCAACCCATGCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR-3UTR GCA 90 bp AAGAACTCAGGGGGCAGTCTCCTCTGGTCATCATGGTACTTGTTCATCCTATACGGGACACCAGCACGCTaGAGGGCCTCAGGGATCTCC +
Preference number: 2 (lower is better)
Translates to: KNSGGSLLWSSWYLFILYGTPAR*RASGIS
Trigger: GGAGATCCCTGAGGCCCTGCAGCGTGCTGGTGTCCC...GTATAGGATGAACAAGTACCATGATGACCAGAGGAGACTGCCCCCTGAGTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR-3UTR CCA 90 bp AGAGAAACCTTCCCAGCTGAGAAGGTGACGGCTAGTGAGGCTGTCCTGAAGATCAGGGTGGGCATGGGTTaGTCTCAGCCAAAGGCTGCT +
Preference number: 2 (lower is better)
Translates to: RETFPAEKVTASEAVLKIRVGMG*SQPKAA
Trigger: AGCAGCCTTTGGCTGAGACCAACCCATGCCCACCCT...GATCTTCAGGACAGCCTCACTAGCCGTCACCTTCTCAGCTGGGAAGGTTTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
3UTR CAA 90 bp GCTTCGATGAGGATGTCCCAGAGGTTGCCATGGGCTTCTGCCAGGTaGATGGTCATTGTCACCCCTCCAGTGAAGTCTACAAGGGCTTCA +
Preference number: 2 (lower is better)
Translates to: ASMRMSQRLPWASAR*MVIVTPPVKSTRAS
Trigger: TGAAGCCCTTGTAGACTTCACTGGAGGGGTGACAATGACCATCAACCTGGCAGAAGCCCATGGCAACCTCTGGGACATCCTCATCGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR-3UTR GCA 90 bp GTGGGCATGGGTTGGTCTCAGCCAAAGGCTGCTCTTGGGCCACATGCAGAGTCTACAGACAGCAGGAACTaGGGGTTCTTCCAAAATGTG +
Preference number: 2 (lower is better)
Translates to: VGMGWSQPKAALGPHAESTDSRN*GFFQNV
Trigger: CACATTTTGGAAGAACCCGCAGTTCCTGCTGTCTGT...AGACTCTGCATGTGGCCCAAGAGCAGCCTTTGGCTGAGACCAACCCATGCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR-3UTR GCA 90 bp GAGGCGGGGGCCGCCGTAGCGGATGAGCATCAGCTGACAGACGTCATCACTGAGAGACGACACCAGAATTaGTGCCAATTTCATAAAAGA +
Preference number: 2 (lower is better)
Translates to: EAGAAVADEHQLTDVITERRHQN*CQFHKR
Trigger: TCTTTTATGAAATTGGCAGCAATTCTGGTGTCGTCT...CTCAGTGATGACGTCTGTCAGCTGATGCTCATCCGCTACGGCGGCCCCCGCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR-3UTR CCA 90 bp GCGTGCAGCTGCTCCCAGTTCAGGTATCCTGACCCACGGTCTTGCTTGTGGAAAAGAAACCTATCAGGCTaGCTCAGAGGAGTGTTTCTC +
Preference number: 2 (lower is better)
Translates to: ACSCSQFRYPDPRSCLWKRNLSG*LRGVFL
Trigger: GAGAAACACTCCTCTGAGCCAGCCTGATAGGTTTCT...TTTCCACAAGCAAGACCGTGGGTCAGGATACCTGAACTGGGAGCAGCTGCACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR-3UTR TCA 90 bp GCATTAAGGTCCAGTAAGGCCAGGATCCCCTGGCAGGCTTCCAGGCTAAAGAAGAGGGGTTCCGTAGCTTaGCGAGATATTCAGGTCTAT +
Preference number: 2 (lower is better)
Translates to: ALRSSKARIPWQASRLKKRGSVA*RDIQVY
Trigger: ATAGACCTGAATATCTCGTCAAGCTACGGAACCCCT...CTTCTTTAGCCTGGAAGCCTGCCAGGGGATCCTGGCCTTACTGGACCTTAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR-3UTR GCA 90 bp TGTTCTGGTTTTGCACCTGTATTCTTGGTTGAGAGGGATGACATAAACAAGGTGGCCTCAGGGATCTCCTaGCCTCCTCGGGCCTCCAGA +
Preference number: 2 (lower is better)
Translates to: CSGFAPVFLVERDDINKVASGIS*PPRASR
Trigger: TCTGGAGGCCCGAGGAGGGCAGGAGATCCCTGAGGC...CACCTTGTTTATGTCATCCCTCTCAACCAAGAATACAGGTGCAAAACCAGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR-3UTR CCA 90 bp AGAGAAACCTTCCCAGCTGAGAAGGTGACGGCTAGTGAGGCTGTCCTGAAGATCCTGGCTCAACAGGCCTaGGGTCAGTTTACAGATAAC +
Preference number: 2 (lower is better)
Translates to: RETFPAEKVTASEAVLKILAQQA*GQFTDN
Trigger: GTTATCTGTAAACTGACCCCAGGCCTGTTGAGCCAG...GATCTTCAGGACAGCCTCACTAGCCGTCACCTTCTCAGCTGGGAAGGTTTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR-3UTR TCA 90 bp CTACCCCATAAGCTACGCTTTCAAAGTGCTCCTTTCTTCTGGTACAGTACCCATGGGTCTGGCAGCCAATaGGGGTTCTGTTGTAGGTGG +
Preference number: 2 (lower is better)
Translates to: LPHKLRFQSAPFFWYSTHGSGSQ*GFCCRW
Trigger: CCACCTACAACAGAACCCTCATTGGCTGCCAGACCC...ATGGGTACTGTACCAGAAGAAAGGAGCACTTTGAAAGCGTAGCTTATGGGGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR-3UTR TCA 90 bp CTACCCCATAAGCTACGCTTTCAAAGTGCTCCTTTCTTCTGGTACAGTACCCATCCTGAGGACGAACTCTaGCTTCTGGTGGGCCTCCAA +
Preference number: 2 (lower is better)
Translates to: LPHKLRFQSAPFFWYSTHPEDEL*LLVGLQ
Trigger: TTGGAGGCCCACCAGAAGTCAGAGTTCGTCCTCAGG...ATGGGTACTGTACCAGAAGAAAGGAGCACTTTGAAAGCGTAGCTTATGGGGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR-3UTR TCA 90 bp ATGGACACACTTTTATCTCTTCATTCAGCTTCCTTCCTGAGTCTGCTATGGAGTGGCCGCCGTAGCGGATaGGCATCAGCTGACAGACGT +
Preference number: 2 (lower is better)
Translates to: MDTLLSLHSASFLSLLWSGRRSG*ASADRR
Trigger: ACGTCTGTCAGCTGATGCTCATCCGCTACGGCGGCC...ACTCCATAGCAGACTCAGGAAGGAAGCTGAATGAAGAGATAAAAGTGTGTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR-3UTR TCA 90 bp GTTTTGGAAGACATCCTCCATGTTCTCTACACGCAGCATCAAGTGGATGAAACTGGGCTTCTGCCAGGTTaGTGGTCATTGTCACCCCTC +
Preference number: 2 (lower is better)
Translates to: VLEDILHVLYTQHQVDETGLLPG*WSLSPL
Trigger: GAGGGGTGACAATGACCATCAACCTGGCAGAAGCCC...AGTTTCATCCACTTGATGCTGCGTGTAGAGAACATGGAGGATGTCTTCCAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR-3UTR GCA 90 bp AGGTTGTGGCCTCAGGGAAGGATGGCTAGCTTTTACAAATCTGATGTAATCTTTGTGTCCTGCAGCAACTaGCTCTGGCCACCAGCTGTG +
Preference number: 2 (lower is better)
Translates to: RLWPQGRMASFYKSDVIFVSCSN*LWPPAV
Trigger: CACAGCTGGTGGCCAGAGGCAGTTGCTGCAGGACAC...AAAGATTACATCAGATTTGTAAAAGCTAGCCATCCTTCCCTGAGGCCACAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR-3UTR GCA 90 bp CTACCCCATAAGCTACGCTTTCAAAGTGCTCCTTTCTTCTGGTACAGTACCCATATGCACGGGGAGGGCTaGAGAAGAGAAACCTTCCCA +
Preference number: 2 (lower is better)
Translates to: LPHKLRFQSAPFFWYSTHMHGEG*RRETFP
Trigger: TGGGAAGGTTTCTCTTCTGCAGCCCTCCCCGTGCAT...ATGGGTACTGTACCAGAAGAAAGGAGCACTTTGAAAGCGTAGCTTATGGGGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
3UTR-3UTR GCA 90 bp ATGGACACACTTTTATCTCTTCATTCAGCTTCCTTCCTGAGTCTGCTATGGAGTCCTTCCCTTTCTGCATaGTGGCCATGCACGGGGAGG +
Preference number: 2 (lower is better)
Translates to: MDTLLSLHSASFLSLLWSPSLSA*WPCTGR
Trigger: CCTCCCCGTGCATGGCCAGCATGCAGAAAGGGAAGG...ACTCCATAGCAGACTCAGGAAGGAAGCTGAATGAAGAGATAAAAGTGTGTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
3UTR-3UTR GCA 90 bp ATGGACACACTTTTATCTCTTCATTCAGCTTCCTTCCTGAGTCTGCTATGGAGTCCTCCCTTCCCTTTCTaGATGCTGGCCATGCACGGG +
Preference number: 2 (lower is better)
Translates to: MDTLLSLHSASFLSLLWSPPFPF*MLAMHG
Trigger: CCCGTGCATGGCCAGCATGCAGAAAGGGAAGGGAGG...ACTCCATAGCAGACTCAGGAAGGAAGCTGAATGAAGAGATAAAAGTGTGTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
3UTR-3UTR GCA 90 bp TGTTCTGGTTTTGCACCTGTATTCTTGGTTGAGAGGGATGACATAAACAAGGTGCCTCCCTTCCCTTTCTaGATGCTGGCCATGCACGGG +
Preference number: 2 (lower is better)
Translates to: CSGFAPVFLVERDDINKVPPFPF*MLAMHG
Trigger: CCCGTGCATGGCCAGCATGCAGAAAGGGAAGGGAGG...CACCTTGTTTATGTCATCCCTCTCAACCAAGAATACAGGTGCAAAACCAGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
3UTR-3UTR CCA 90 bp ACAGGTGCTCAAATCTCCTTTAGTCCTCTGCCAATGGACACACTTTTATCTCTTGTGTACGTCCACTTCTaGGCCGCCTCCTGGCTCAAC +
Preference number: 2 (lower is better)
Translates to: TGAQISFSPLPMDTLLSLVYVHF*AASWLN
Trigger: GTTGAGCCAGGAGGCGGCCCAGAAGTGGACGTACAC...AAGAGATAAAAGTGTGTCCATTGGCAGAGGACTAAAGGAGATTTGAGCACCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR-3UTR GCA 90 bp GACCAGAAGTGTTTCAGATTTCAGGATATCTGCATTATAGACTTGTCAGTTGAAGGAGAGGCTTCCGCTTaGGGCACCTGTGCCTGGGCT +
Preference number: 2 (lower is better)
Translates to: DQKCFRFQDICIIDLSVEGEASA*GTCAWA
Trigger: AGCCCAGGCACAGGTGCCGCAAGCGGAAGCCTCTCC...TTCAACTGACAAGTCTATAATGCAGATATCCTGAAATCTGAAACACTTCTGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR-3UTR CCA 90 bp TGGAAAAAGGCCATTGTTCTGGTTTTGCACCTGTATTCTTGGTTGAGAGGGATGTCCCAGAGGTTGCCATaGGCTTCTGCCAGGTTGATG +
Preference number: 2 (lower is better)
Translates to: WKKAIVLVLHLYSWLRGMSQRLP*ASARLM
Trigger: CATCAACCTGGCAGAAGCCCATGGCAACCTCTGGGA...CATCCCTCTCAACCAAGAATACAGGTGCAAAACCAGAACAATGGCCTTTTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR CAA 90 bp CAGAATTCTCCGTCATTGTCTTTCCTCAGAAGCAGAATCTTCTCCTaGGGGCTCAGCAGCTCCCATTTACTTGAACTGTCACTCCAGTCT +
Preference number: 2 (lower is better)
Translates to: QNSPSLSFLRSRIFS*GLSSSHLLELSLQS
Trigger: AGACTGGAGTGACAGTTCAAGTAAATGGGAGCTGCTGAGCCCCAAGGAGAAGATTCTGCTTCTGAGGAAAGACAATGACGGAGAATTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR-3UTR GCA 90 bp CTACCCCATAAGCTACGCTTTCAAAGTGCTCCTTTCTTCTGGTACAGTACCCATACCCCACCTGGACTCTaGCAATTCTCTTACTGTCTG +
Preference number: 2 (lower is better)
Translates to: LPHKLRFQSAPFFWYSTHTPPGL*QFSYCL
Trigger: CAGACAGTAAGAGAATTGGCAGAGTCCAGGTGGGGT...ATGGGTACTGTACCAGAAGAAAGGAGCACTTTGAAAGCGTAGCTTATGGGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
3UTR-3UTR CCA 90 bp GCTCAAATCTCCTTTAGTCCTCTGCCAATGGACACACTTTTATCTCTTCATTCATCCCCTGAGTGGGTCTaGCAGCCAATGAGGGTTCTG +
Preference number: 2 (lower is better)
Translates to: AQISFSPLPMDTLLSLHSSPEWV*QPMRVL
Trigger: CAGAACCCTCATTGGCTGCCAGACCCACTCAGGGGA...TGAATGAAGAGATAAAAGTGTGTCCATTGGCAGAGGACTAAAGGAGATTTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR CAA 90 bp AGAATGCTTAGGCCATGTCAGGTAACATCTCCGCTTGTGACAAGGTaGTGGCCTCAGGGAAGGATGGCTAGCTTTTACAAATCTGATGTA +
Preference number: 2 (lower is better)
Translates to: RMLRPCQVTSPLVTR*WPQGRMASFYKSDV
Trigger: TACATCAGATTTGTAAAAGCTAGCCATCCTTCCCTGAGGCCACAACCTTGTCACAAGCGGAGATGTTACCTGACATGGCCTAAGCATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
3UTR-3UTR TCA 90 bp ATGGACACACTTTTATCTCTTCATTCAGCTTCCTTCCTGAGTCTGCTATGGAGTTCCTGGAGAAGACCCTaGGGACGAACTCTGACTTCT +
Preference number: 2 (lower is better)
Translates to: MDTLLSLHSASFLSLLWSSWRRP*GRTLTS
Trigger: AGAAGTCAGAGTTCGTCCTCAGGGTCTTCTCCAGGA...ACTCCATAGCAGACTCAGGAAGGAAGCTGAATGAAGAGATAAAAGTGTGTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR-3UTR TCA 90 bp CTACCCCATAAGCTACGCTTTCAAAGTGCTCCTTTCTTCTGGTACAGTACCCATATGTCTAAAGTCACTTaGGTTTGCAGCCACAGAGGC +
Preference number: 2 (lower is better)
Translates to: LPHKLRFQSAPFFWYSTHMSKVT*VCSHRG
Trigger: GCCTCTGTGGCTGCAAACTCAAGTGACTTTAGACAT...ATGGGTACTGTACCAGAAGAAAGGAGCACTTTGAAAGCGTAGCTTATGGGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
3UTR-3UTR GCA 90 bp AGAGAAACCTTCCCAGCTGAGAAGGTGACGGCTAGTGAGGCTGTCCTGAAGATCCGACACCAGAATTGCTaGCAATTTCATAAAAGATGT +
Preference number: 2 (lower is better)
Translates to: RETFPAEKVTASEAVLKIRHQNC*QFHKRC
Trigger: ACATCTTTTATGAAATTGGCAGCAATTCTGGTGTCG...GATCTTCAGGACAGCCTCACTAGCCGTCACCTTCTCAGCTGGGAAGGTTTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR-3UTR CCA 90 bp ACAGGTGCTCAAATCTCCTTTAGTCCTCTGCCAATGGACACACTTTTATCTCTTAACTCTGACTTCTGGTaGGCCTCCAATATGCAGGGC +
Preference number: 2 (lower is better)
Translates to: TGAQISFSPLPMDTLLSLNSDFW*ASNMQG
Trigger: GCCCTGCATATTGGAGGCCCACCAGAAGTCAGAGTT...AAGAGATAAAAGTGTGTCCATTGGCAGAGGACTAAAGGAGATTTGAGCACCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR-3UTR CCA 90 bp CTACCCCATAAGCTACGCTTTCAAAGTGCTCCTTTCTTCTGGTACAGTACCCATGGCCTCAGGGAAGGATaGCTAGCTTTTACAAATCTG +
Preference number: 2 (lower is better)
Translates to: LPHKLRFQSAPFFWYSTHGLREG*LAFTNL
Trigger: CAGATTTGTAAAAGCTAGCCATCCTTCCCTGAGGCC...ATGGGTACTGTACCAGAAGAAAGGAGCACTTTGAAAGCGTAGCTTATGGGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
3UTR-3UTR TCA 90 bp TTTACAGATAACCAGGAGCACGAAATGTGTTTTAAAGTCCTGCAGCGTCATCCACAGCTCCCATTTACTTaGACTGTCACTCCAGTCTCC +
Preference number: 2 (lower is better)
Translates to: FTDNQEHEMCFKVLQRHPQLPFT*TVTPVS
Trigger: GGAGACTGGAGTGACAGTTCAAGTAAATGGGAGCTG...TGGATGACGCTGCAGGACTTTAAAACACATTTCGTGCTCCTGGTTATCTGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR-3UTR TCA 90 bp ATGGACACACTTTTATCTCTTCATTCAGCTTCCTTCCTGAGTCTGCTATGGAGTCTAGTGAGGCTGTCCTaGAGATCAGTAAGTAGGGTG +
Preference number: 2 (lower is better)
Translates to: MDTLLSLHSASFLSLLWSLVRLS*RSVSRV
Trigger: CACCCTACTTACTGATCTTCAGGACAGCCTCACTAG...ACTCCATAGCAGACTCAGGAAGGAAGCTGAATGAAGAGATAAAAGTGTGTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
3UTR-3UTR TCA 90 bp CTACCCCATAAGCTACGCTTTCAAAGTGCTCCTTTCTTCTGGTACAGTACCCATTACTGTCTGTGTTTCTaGAAGCCCACTATATCCCTG +
Preference number: 2 (lower is better)
Translates to: LPHKLRFQSAPFFWYSTHYCLCF*KPTISL
Trigger: CAGGGATATAGTGGGCTTTCAGAAACACAGACAGTA...ATGGGTACTGTACCAGAAGAAAGGAGCACTTTGAAAGCGTAGCTTATGGGGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
3UTR-3UTR TCA 90 bp CAATTTGCAGATGCTGGGACTAAATGTCTAAGGATATATCATTCCCATTTCAGATGTAGGTGGCTTCGATaGGGATGTCCCAGAGGTTGC +
Preference number: 2 (lower is better)
Translates to: QFADAGTKCLRIYHSHFRCRWLR*GCPRGC
Trigger: GCAACCTCTGGGACATCCTCATCGAAGCCACCTACA...TCTGAAATGGGAATGATATATCCTTAGACATTTAGTCCCAGCATCTGCAAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR-3UTR TCA 90 bp ATGGACACACTTTTATCTCTTCATTCAGCTTCCTTCCTGAGTCTGCTATGGAGTGATTACCCCACCATGTaGGAACATGTGGCATGTCTA +
Preference number: 2 (lower is better)
Translates to: MDTLLSLHSASFLSLLWSDYPTM*EHVACL
Trigger: TAGACATGCCACATGTTCTCACATGGTGGGGTAATC...ACTCCATAGCAGACTCAGGAAGGAAGCTGAATGAAGAGATAAAAGTGTGTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
3UTR-3UTR TCA 90 bp ATGGACACACTTTTATCTCTTCATTCAGCTTCCTTCCTGAGTCTGCTATGGAGTCCATCCCCAAACAGCTaGAACTTAGCCTATGTCTCT +
Preference number: 2 (lower is better)
Translates to: MDTLLSLHSASFLSLLWSPSPNS*NLAYVS
Trigger: AGAGACATAGGCTAAGTTTCAGCTGTTTGGGGATGG...ACTCCATAGCAGACTCAGGAAGGAAGCTGAATGAAGAGATAAAAGTGTGTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
3UTR-3UTR GCA 90 bp CATTGTTCTGGTTTTGCACCTGTATTCTTGGTTGAGAGGGATGACATAAACAAGTTCCAAAATGTGTCCTaGAGCAACTGCCTCTGGCCA +
Preference number: 2 (lower is better)
Translates to: HCSGFAPVFLVERDDINKFQNVS*SNCLWP
Trigger: TGGCCAGAGGCAGTTGCTGCAGGACACATTTTGGAA...CTTGTTTATGTCATCCCTCTCAACCAAGAATACAGGTGCAAAACCAGAACAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR-3UTR TCA 90 bp CATTGTTCTGGTTTTGCACCTGTATTCTTGGTTGAGAGGGATGACATAAACAAGTCACTTCTTTCTCCTTaGGAAACCTATCAGGCTGGC +
Preference number: 2 (lower is better)
Translates to: HCSGFAPVFLVERDDINKSLLSP*ETYQAG
Trigger: GCCAGCCTGATAGGTTTCTCAAGGAGAAAGAAGTGA...CTTGTTTATGTCATCCCTCTCAACCAAGAATACAGGTGCAAAACCAGAACAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR-3UTR CCA 90 bp CAATTTGCAGATGCTGGGACTAAATGTCTAAGGATATATCATTCCCATTTCAGAGCAGAATCTTCTCCTTaGGGCTCAGCAGCTCCCATT +
Preference number: 2 (lower is better)
Translates to: QFADAGTKCLRIYHSHFRAESSP*GSAAPI
Trigger: AATGGGAGCTGCTGAGCCCCAAGGAGAAGATTCTGC...TCTGAAATGGGAATGATATATCCTTAGACATTTAGTCCCAGCATCTGCAAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR-3UTR CCA 90 bp CTACCCCATAAGCTACGCTTTCAAAGTGCTCCTTTCTTCTGGTACAGTACCCATAGTCTGCTATGGAGTTaGAAATCAAACAGCCATGTT +
Preference number: 2 (lower is better)
Translates to: LPHKLRFQSAPFFWYSTHSLLWS*KSNSHV
Trigger: AACATGGCTGTTTGATTTCCAACTCCATAGCAGACT...ATGGGTACTGTACCAGAAGAAAGGAGCACTTTGAAAGCGTAGCTTATGGGGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
3UTR-3UTR TCA 90 bp ACAGGTGCTCAAATCTCCTTTAGTCCTCTGCCAATGGACACACTTTTATCTCTTAAGCAGGAAGCCCTTTaGGAACTCAGGTGTTTTAAA +
Preference number: 2 (lower is better)
Translates to: TGAQISFSPLPMDTLLSLKQEAL*ELRCFK
Trigger: TTTAAAACACCTGAGTTCTCAAAGGGCTTCCTGCTT...AAGAGATAAAAGTGTGTCCATTGGCAGAGGACTAAAGGAGATTTGAGCACCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
3UTR-3UTR GCA 90 bp TGGAAAAAGGCCATTGTTCTGGTTTTGCACCTGTATTCTTGGTTGAGAGGGATGTGTGTTTTAAAGTCCTaGAGCGTCATCCAGAATTCT +
Preference number: 2 (lower is better)
Translates to: WKKAIVLVLHLYSWLRGMCVLKS*SVIQNS
Trigger: AGAATTCTGGATGACGCTGCAGGACTTTAAAACACA...CATCCCTCTCAACCAAGAATACAGGTGCAAAACCAGAACAATGGCCTTTTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR-3UTR GCA 90 bp ACAGGTGCTCAAATCTCCTTTAGTCCTCTGCCAATGGACACACTTTTATCTCTTGTTCTGAAGTTGAACTaGATTAATCTCTGGATGCTT +
Preference number: 2 (lower is better)
Translates to: TGAQISFSPLPMDTLLSLVLKLN*INLWML
Trigger: AAGCATCCAGAGATTAATGCAGTTCAACTTCAGAAC...AAGAGATAAAAGTGTGTCCATTGGCAGAGGACTAAAGGAGATTTGAGCACCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR-3UTR GCA 90 bp GCTCAAATCTCCTTTAGTCCTCTGCCAATGGACACACTTTTATCTCTTCATTCAGCATTAATCTCTGGATaGTTTTCAAAGAATTTGGTG +
Preference number: 2 (lower is better)
Translates to: AQISFSPLPMDTLLSLHSALISG*FSKNLV
Trigger: CACCAAATTCTTTGAAAAGCATCCAGAGATTAATGC...TGAATGAAGAGATAAAAGTGTGTCCATTGGCAGAGGACTAAAGGAGATTTGAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR-3UTR GCA 90 bp GACCAGAAGTGTTTCAGATTTCAGGATATCTGCATTATAGACTTGTCAGTTGAAGTGAAGAATTCATCCTaGCTTTCATTTTGGTCTTCT +
Preference number: 2 (lower is better)
Translates to: DQKCFRFQDICIIDLSVEVKNSS*LSFWSS
Trigger: AGAAGACCAAAATGAAAGGCAGGATGAATTCTTCAC...TTCAACTGACAAGTCTATAATGCAGATATCCTGAAATCTGAAACACTTCTGGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR GCA 72 bp TGTGCCTGGGCTTCTGGAGCAGGGACACCAGCACGCTaGAGGGCCTCAGGGATCTCCTGCCCTCCTCGGGCC +
Preference number: 3 (lower is better)
Translates to: CAWASGAGTPAR*RASGISCPPRA
Trigger: GGCCCGAGGAGGGCAGGAGATCCCTGAGGCCCTGCAGCGTGCTGGTGTCCCTGCTCCAGAAGCCCAGGCACA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR-3UTR CAA 90 bp GAGGCGGGGGCCGCCGTAGCGGATGAGCATCAGCTGACAGACGTCATCACTGAGAGGAGAGGCTTCCGCTaGCGGCACCTGTGCCTGGGC +
Preference number: 3 (lower is better)
Translates to: EAGAAVADEHQLTDVITERRGFR*RHLCLG
Trigger: GCCCAGGCACAGGTGCCGCAAGCGGAAGCCTCTCCT...CTCAGTGATGACGTCTGTCAGCTGATGCTCATCCGCTACGGCGGCCCCCGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR GCA 72 bp CCAATGGCGAGGAGAGGCTTCCGCTTGCGGCACCTGTaGCTGGGCTTCTGGAGCAGGGACACCAGCACGCTG +
Preference number: 3 (lower is better)
Translates to: PMARRGFRLRHL*LGFWSRDTSTL
Trigger: CAGCGTGCTGGTGTCCCTGCTCCAGAAGCCCAGGCACAGGTGCCGCAAGCGGAAGCCTCTCCTCGCCATTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR GCA 72 bp ATGTGTCCTGCAGCAACTGCCTCTGGCCACCAGCTGTaGTCCGCTTCTCCCATCTCCCCTCCCGCATGGTGT +
Preference number: 3 (lower is better)
Translates to: MCPAATASGHQL*SASPISPPAWC
Trigger: ACACCATGCGGGAGGGGAGATGGGAGAAGCGGAGCACAGCTGGTGGCCAGAGGCAGTTGCTGCAGGACACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR GCA 72 bp AGCATGATTCCTGCCTCCCTCATGGCAGCGTGCAGCTaGTCCCAGTTCAGGTATCCTGACCCACGGTCTTGC +
Preference number: 3 (lower is better)
Translates to: SMIPASLMAACS*SQFRYPDPRSC
Trigger: GCAAGACCGTGGGTCAGGATACCTGAACTGGGAGCAGCTGCACGCTGCCATGAGGGAGGCAGGAATCATGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR GCA 72 bp TCACTGAGCATGATTCCTGCCTCCCTCATGGCAGCGTaGAGCTGCTCCCAGTTCAGGTATCCTGACCCACGG +
Preference number: 3 (lower is better)
Translates to: SLSMIPASLMAA*SCSQFRYPDPR
Trigger: CCGTGGGTCAGGATACCTGAACTGGGAGCAGCTGCACGCTGCCATGAGGGAGGCAGGAATCATGCTCAGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR CCA 72 bp TCCCGCATGGTGTACGTCCACTTCTGGGCCGCCTCCTaGCTCAACAGGCCTGGGGTCAGTTTACAGATAACC +
Preference number: 3 (lower is better)
Translates to: SRMVYVHFWAAS*LNRPGVSLQIT
Trigger: GGTTATCTGTAAACTGACCCCAGGCCTGTTGAGCCAGGAGGCGGCCCAGAAGTGGACGTACACCATGCGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR TCA 72 bp CTGACTTCTGGTGGGCCTCCAATATGCAGGGCACGATaGGGTACGTCCCTGGTTCCAGACACAGCTCCTGAC +
Preference number: 3 (lower is better)
Translates to: LTSGGPPICRAR*GTSLVPDTAPD
Trigger: GTCAGGAGCTGTGTCTGGAACCAGGGACGTACCTCATCGTGCCCTGCATATTGGAGGCCCACCAGAAGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR CCA 72 bp CCTGATGCATTAAGGTCCAGTAAGGCCAGGATCCCCTaGCAGGCTTCCAGGCTAAAGAAGGGCTGTCTGCTC +
Preference number: 3 (lower is better)
Translates to: PDALRSSKARIP*QASRLKKGCLL
Trigger: GAGCAGACAGCCCTTCTTTAGCCTGGAAGCCTGCCAGGGGATCCTGGCCTTACTGGACCTTAATGCATCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR TCA 72 bp GATGTGCTTCCTGGAGAAGACCCTGAGGACGAACTCTaGCTTCTGGTGGGCCTCCAATATGCAGGGCACGAT +
Preference number: 3 (lower is better)
Translates to: DVLPGEDPEDEL*LLVGLQYAGHD
Trigger: ATCGTGCCCTGCATATTGGAGGCCCACCAGAAGTCAGAGTTCGTCCTCAGGGTCTTCTCCAGGAAGCACATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR TCA 72 bp CATGGCAGCGTGCAGCTGCTCCCAGTTCAGGTATCCTaGCCCACGGTCTTGCTTGTGGAAAACCTTCTGAGA +
Preference number: 3 (lower is better)
Translates to: HGSVQLLPVQVS*PTVLLVENLLR
Trigger: TCTCAGAAGGTTTTCCACAAGCAAGACCGTGGGTCAGGATACCTGAACTGGGAGCAGCTGCACGCTGCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR CCA 72 bp CATGGTACTTGTTCATCCTATACAGGTAGAAGCCAATaGCGAGGAGAGGCTTCCGCTTGCGGCACCTGTGCC +
Preference number: 3 (lower is better)
Translates to: HGTCSSYTGRSQ*RGEASACGTCA
Trigger: GGCACAGGTGCCGCAAGCGGAAGCCTCTCCTCGCCATTGGCTTCTACCTGTATAGGATGAACAAGTACCATG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR CCA 72 bp GGCCTCCAATATGCAGGGCACGATGAGGTACGTCCCTaGTTCCAGACACAGCTCCTGACTCACTTCTTTCTC +
Preference number: 3 (lower is better)
Translates to: GLQYAGHDEVRP*FQTQLLTHFFL
Trigger: GAGAAAGAAGTGAGTCAGGAGCTGTGTCTGGAACCAGGGACGTACCTCATCGTGCCCTGCATATTGGAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR-3UTR CAA 90 bp GCATTAAGGTCCAGTAAGGCCAGGATCCCCTGGCAGGCTTCCAGGCTAAAGAAGCAGGAGGTTCTGAAGTaGAACTGCATTAATCTCTGG +
Preference number: 3 (lower is better)
Translates to: ALRSSKARIPWQASRLKKQEVLK*NCINLW
Trigger: CCAGAGATTAATGCAGTTCAACTTCAGAACCTCCTG...CTTCTTTAGCCTGGAAGCCTGCCAGGGGATCCTGGCCTTACTGGACCTTAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR CCA 72 bp AAGACATCCTCCATGTTCTCTACACGCAGCATCAAGTaGATGAAACTGACAAAGTCCATCTGGAGGCGGGGG +
Preference number: 3 (lower is better)
Translates to: KTSSMFSTRSIK*MKLTKSIWRRG
Trigger: CCCCCGCCTCCAGATGGACTTTGTCAGTTTCATCCACTTGATGCTGCGTGTAGAGAACATGGAGGATGTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR-3UTR CAA 90 bp AGAGAAACCTTCCCAGCTGAGAAGGTGACGGCTAGTGAGGCTGTCCTGAAGATCTATTCAGGTCTATGTTaGCAGGTCACCTTCCTGATT +
Preference number: 3 (lower is better)
Translates to: RETFPAEKVTASEAVLKIYSGLC*QVTFLI
Trigger: AATCAGGAAGGTGACCTGCAAACATAGACCTGAATA...GATCTTCAGGACAGCCTCACTAGCCGTCACCTTCTCAGCTGGGAAGGTTTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR-3UTR CAA 90 bp GACCCCATCCCCAAACAGCTGAAACTTAGCCTATGTCTCTATCAATTTGCAGATAGCAGAATCTTCTCCTaGGGGCTCAGCAGCTCCCAT +
Preference number: 3 (lower is better)
Translates to: DPIPKQLKLSLCLYQFADSRIFS*GLSSSH
Trigger: ATGGGAGCTGCTGAGCCCCAAGGAGAAGATTCTGCT...ATCTGCAAATTGATAGAGACATAGGCTAAGTTTCAGCTGTTTGGGGATGGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR-3UTR CAA 90 bp TGTTCTGGTTTTGCACCTGTATTCTTGGTTGAGAGGGATGACATAAACAAGGTGCCGCTTGTGACAAGGTaGTGGCCTCAGGGAAGGATG +
Preference number: 3 (lower is better)
Translates to: CSGFAPVFLVERDDINKVPLVTR*WPQGRM
Trigger: CATCCTTCCCTGAGGCCACAACCTTGTCACAAGCGG...CACCTTGTTTATGTCATCCCTCTCAACCAAGAATACAGGTGCAAAACCAGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
3UTR TCA 72 bp CACCATGTGAGAACATGTGGCATGTCTAAAGTCACTTaGGTTTGCAGCCACAGAGGCAGTGTTGTATGGAGG +
Preference number: 3 (lower is better)
Translates to: HHVRTCGMSKVT*VCSHRGSVVWR
Trigger: CCTCCATACAACACTGCCTCTGTGGCTGCAAACTCAAGTGACTTTAGACATGCCACATGTTCTCACATGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
3UTR CCA 72 bp CGTCATTGTCTTTCCTCAGAAGCAGAATCTTCTCCTTaGGGCTCAGCAGCTCCCATTTACTTGAACTGTCAC +
Preference number: 3 (lower is better)
Translates to: RHCLSSEAESSP*GSAAPIYLNCH
Trigger: GTGACAGTTCAAGTAAATGGGAGCTGCTGAGCCCCAAGGAGAAGATTCTGCTTCTGAGGAAAGACAATGACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR CCA 72 bp CCATGTCAGGTAACATCTCCGCTTGTGACAAGGTTGTaGCCTCAGGGAAGGATGGCTAGCTTTTACAAATCT +
Preference number: 3 (lower is better)
Translates to: PCQVTSPLVTRL*PQGRMASFYKS
Trigger: AGATTTGTAAAAGCTAGCCATCCTTCCCTGAGGCCACAACCTTGTCACAAGCGGAGATGTTACCTGACATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
3UTR CCA 72 bp CCCCATAAGCTACGCTTTCAAAGTGCTCCTTTCTTCTaGTACAGTACCCATCTGACAGGTGCTCAAATCTCC +
Preference number: 3 (lower is better)
Translates to: PHKLRFQSAPFF*YSTHLTGAQIS
Trigger: GGAGATTTGAGCACCTGTCAGATGGGTACTGTACCAGAAGAAAGGAGCACTTTGAAAGCGTAGCTTATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
3UTR-3UTR CAA 90 bp TTTACAGATAACCAGGAGCACGAAATGTGTTTTAAAGTCCTGCAGCGTCATCCATGGGCTTCTGCCAGGTaGATGGTCATTGTCACCCCT +
Preference number: 3 (lower is better)
Translates to: FTDNQEHEMCFKVLQRHPWASAR*MVIVTP
Trigger: AGGGGTGACAATGACCATCAACCTGGCAGAAGCCCA...TGGATGACGCTGCAGGACTTTAAAACACATTTCGTGCTCCTGGTTATCTGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR-3UTR CAA 90 bp GTTTTGGAAGACATCCTCCATGTTCTCTACACGCAGCATCAAGTGGATGAAACTGCAGCTCCCATTTACTaGAACTGTCACTCCAGTCTC +
Preference number: 3 (lower is better)
Translates to: VLEDILHVLYTQHQVDETAAPIY*NCHSSL
Trigger: GAGACTGGAGTGACAGTTCAAGTAAATGGGAGCTGC...AGTTTCATCCACTTGATGCTGCGTGTAGAGAACATGGAGGATGTCTTCCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR TCA 72 bp GCAAATAGACACACCTGTCACAAGCAGGAAGCCCTTTaGGAACTCAGGTGTTTTAAATCTACTAGGTTGCCC +
Preference number: 3 (lower is better)
Translates to: ANRHTCHKQEAL*ELRCFKSTRLP
Trigger: GGGCAACCTAGTAGATTTAAAACACCTGAGTTCTCAAAGGGCTTCCTGCTTGTGACAGGTGTGTCTATTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
3UTR TCA 72 bp TTCAAAGTGCTCCTTTCTTCTGGTACAGTACCCATCTaGCAGGTGCTCAAATCTCCTTTAGTCCTCTGCCAA +
Preference number: 3 (lower is better)
Translates to: FKVLLSSGTVPI*QVLKSPLVLCQ
Trigger: TTGGCAGAGGACTAAAGGAGATTTGAGCACCTGTCAGATGGGTACTGTACCAGAAGAAAGGAGCACTTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
3UTR GCA 72 bp TCATCATCCACTCTGGCTTCTGGAGGTATATCCCTTTaGCATCTTGGGTTAAGTTTTGGAAGACATCCTCCA +
Preference number: 3 (lower is better)
Translates to: SSSTLASGGISL*HLGLSFGRHPP
Trigger: TGGAGGATGTCTTCCAAAACTTAACCCAAGATGGCAAAGGGATATACCTCCAGAAGCCAGAGTGGATGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR-3UTR CAA 90 bp GACCAGAAGTGTTTCAGATTTCAGGATATCTGCATTATAGACTTGTCAGTTGAACAGGGGTTCCGTAGCTaGACGAGATATTCAGGTCTA +
Preference number: 3 (lower is better)
Translates to: DQKCFRFQDICIIDLSVEQGFRS*TRYSGL
Trigger: TAGACCTGAATATCTCGTCAAGCTACGGAACCCCTG...TTCAACTGACAAGTCTATAATGCAGATATCCTGAAATCTGAAACACTTCTGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR GCA 72 bp CCCTTTGAGAACTCAGGTGTTTTAAATCTACTAGGTTaGCCCAGATCCAATCATACGGAGATATTGTCAGAA +
Preference number: 3 (lower is better)
Translates to: PFENSGVLNLLG*PRSNHTEILSE
Trigger: TTCTGACAATATCTCCGTATGATTGGATCTGGGGCAACCTAGTAGATTTAAAACACCTGAGTTCTCAAAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
3UTR TCA 72 bp GATATATCATTCCCATTTCAGACCTTAAAACCTAGATaGTTACCCCACCATGTGAGAACATGTGGCATGTCT +
Preference number: 3 (lower is better)
Translates to: DISFPFQTLKPR*LPHHVRTCGMS
Trigger: AGACATGCCACATGTTCTCACATGGTGGGGTAATCATCTAGGTTTTAAGGTCTGAAATGGGAATGATATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR GCA 90 bp GTAGAAGCCAATGGCGAGGAGAGGCTTCCGCTTGCGGCACCTGTGCCTGGGCTTCCTCCCTTCCCTTTCTaGATGCTGGCCATGCACGGG +
Preference number: 4 (lower is better)
Translates to: VEANGEERLPLAAPVPGLPPFPF*MLAMHG
Trigger: CCCGTGCATGGCCAGCATGCAGAAAGGGAAGGGAGG...AAGCCCAGGCACAGGTGCCGCAAGCGGAAGCCTCTCCTCGCCATTGGCTTCTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR CCA 90 bp CTGGGCTTCTGGAGCAGGGACACCAGCACGCTGCAGGGCCTCAGGGATCTCCTGCTGTTGGGGTTGCTGTaGAGACGCCCTCCTAGAGTA +
Preference number: 4 (lower is better)
Translates to: LGFWSRDTSTLQGLRDLLLLGLL*RRPPRV
Trigger: TACTCTAGGAGGGCGTCTCCACAGCAACCCCAACAG...CAGGAGATCCCTGAGGCCCTGCAGCGTGCTGGTGTCCCTGCTCCAGAAGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR GCA 90 bp CTGGAGGCGGGGGCCGCCGTAGCGGATGAGCATCAGCTGACAGACGTCATCACTATGGCAGCGTGCAGCTaGTCCCAGTTCAGGTATCCT +
Preference number: 4 (lower is better)
Translates to: LEAGAAVADEHQLTDVITMAACS*SQFRYP
Trigger: AGGATACCTGAACTGGGAGCAGCTGCACGCTGCCAT...AGTGATGACGTCTGTCAGCTGATGCTCATCCGCTACGGCGGCCCCCGCCTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR GCA 90 bp GTAGGGTGGGCATGGGTTGGTCTCAGCCAAAGGCTGCTCTTGGGCCACATGCAGCCTCCCTTCCCTTTCTaGATGCTGGCCATGCACGGG +
Preference number: 4 (lower is better)
Translates to: VGWAWVGLSQRLLLGHMQPPFPF*MLAMHG
Trigger: CCCGTGCATGGCCAGCATGCAGAAAGGGAAGGGAGG...CTGCATGTGGCCCAAGAGCAGCCTTTGGCTGAGACCAACCCATGCCCACCCTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR TCA 90 bp GTAGGGTGGGCATGGGTTGGTCTCAGCCAAAGGCTGCTCTTGGGCCACATGCAGCCTGAGGACGAACTCTaGCTTCTGGTGGGCCTCCAA +
Preference number: 4 (lower is better)
Translates to: VGWAWVGLSQRLLLGHMQPEDEL*LLVGLQ
Trigger: TTGGAGGCCCACCAGAAGTCAGAGTTCGTCCTCAGG...CTGCATGTGGCCCAAGAGCAGCCTTTGGCTGAGACCAACCCATGCCCACCCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR TCA 90 bp GAGGCGGGGGCCGCCGTAGCGGATGAGCATCAGCTGACAGACGTCATCACTGAGTCCTGGAGAAGACCCTaGGGACGAACTCTGACTTCT +
Preference number: 4 (lower is better)
Translates to: EAGAAVADEHQLTDVITESWRRP*GRTLTS
Trigger: AGAAGTCAGAGTTCGTCCTCAGGGTCTTCTCCAGGA...CTCAGTGATGACGTCTGTCAGCTGATGCTCATCCGCTACGGCGGCCCCCGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR GCA 90 bp GCCATGGGCTTCTGCCAGGTTGATGGTCATTGTCACCCCTCCAGTGAAGTCTACGGGACACCAGCACGCTaGAGGGCCTCAGGGATCTCC +
Preference number: 4 (lower is better)
Translates to: AMGFCQVDGHCHPSSEVYGTPAR*RASGIS
Trigger: GGAGATCCCTGAGGCCCTGCAGCGTGCTGGTGTCCC...GTAGACTTCACTGGAGGGGTGACAATGACCATCAACCTGGCAGAAGCCCATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR GCA 90 bp GCCATGGGCTTCTGCCAGGTTGATGGTCATTGTCACCCCTCCAGTGAAGTCTACCGCTTGCGGCACCTGTaGCTGGGCTTCTGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: AMGFCQVDGHCHPSSEVYRLRHL*LGFWSR
Trigger: CCTGCTCCAGAAGCCCAGGCACAGGTGCCGCAAGCG...GTAGACTTCACTGGAGGGGTGACAATGACCATCAACCTGGCAGAAGCCCATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR CCA 90 bp ACCTTCCCAGCTGAGAAGGTGACGGCTAGTGAGGCTGTCCTGAAGATCAGTAAGGGGAGCCACTGCCGATaGAGCTCAGGGTGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: TFPAEKVTASEAVLKISKGSHCR*SSGWPG
Trigger: TCCCGGCCACCCTGAGCTCCATCGGCAGTGGCTCCC...CTTACTGATCTTCAGGACAGCCTCACTAGCCGTCACCTTCTCAGCTGGGAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp GCCATGGGCTTCTGCCAGGTTGATGGTCATTGTCACCCCTCCAGTGAAGTCTACTTCTGGGCCGCCTCCTaGCTCAACAGGCCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: AMGFCQVDGHCHPSSEVYFWAAS*LNRPGV
Trigger: GACCCCAGGCCTGTTGAGCCAGGAGGCGGCCCAGAA...GTAGACTTCACTGGAGGGGTGACAATGACCATCAACCTGGCAGAAGCCCATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR TCA 90 bp GAGGCGGGGGCCGCCGTAGCGGATGAGCATCAGCTGACAGACGTCATCACTGAGCAGCTCCCATTTACTTaGACTGTCACTCCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: EAGAAVADEHQLTDVITEQLPFT*TVTPVS
Trigger: GGAGACTGGAGTGACAGTTCAAGTAAATGGGAGCTG...CTCAGTGATGACGTCTGTCAGCTGATGCTCATCCGCTACGGCGGCCCCCGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR TCA 90 bp GCCATGGGCTTCTGCCAGGTTGATGGTCATTGTCACCCCTCCAGTGAAGTCTACGGCCGCCGTAGCGGATaGGCATCAGCTGACAGACGT +
Preference number: 4 (lower is better)
Translates to: AMGFCQVDGHCHPSSEVYGRRSG*ASADRR
Trigger: ACGTCTGTCAGCTGATGCTCATCCGCTACGGCGGCC...GTAGACTTCACTGGAGGGGTGACAATGACCATCAACCTGGCAGAAGCCCATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR GCA 90 bp GCCAGGTTGATGGTCATTGTCACCCCTCCAGTGAAGTCTACAAGGGCTTCAGACGCAGCAGGGAGCCACTaGCGATGGAGCTCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: ARLMVIVTPPVKSTRASDAAGSH*RWSSGW
Trigger: CCACCCTGAGCTCCATCGGCAGTGGCTCCCTGCTGC...GTCTGAAGCCCTTGTAGACTTCACTGGAGGGGTGACAATGACCATCAACCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR CCA 90 bp GTGGGCATGGGTTGGTCTCAGCCAAAGGCTGCTCTTGGGCCACATGCAGAGTCTGTGGCCACAGAGACATaGCAGGTGGTGGGTACAGTC +
Preference number: 4 (lower is better)
Translates to: VGMGWSQPKAALGPHAESVATET*QVVGTV
Trigger: GACTGTACCCACCACCTGCCATGTCTCTGTGGCCAC...AGACTCTGCATGTGGCCCAAGAGCAGCCTTTGGCTGAGACCAACCCATGCCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp GTAGGGTGGGCATGGGTTGGTCTCAGCCAAAGGCTGCTCTTGGGCCACATGCAGATCTTCTCCCCTGAGTaGGTCTGGCAGCCAATGAGG +
Preference number: 4 (lower is better)
Translates to: VGWAWVGLSQRLLLGHMQIFSPE*VWQPMR
Trigger: CCTCATTGGCTGCCAGACCCACTCAGGGGAGAAGAT...CTGCATGTGGCCCAAGAGCAGCCTTTGGCTGAGACCAACCCATGCCCACCCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp GAGGCGGGGGCCGCCGTAGCGGATGAGCATCAGCTGACAGACGTCATCACTGAGCTGGCTCAACAGGCCTaGGGTCAGTTTACAGATAAC +
Preference number: 4 (lower is better)
Translates to: EAGAAVADEHQLTDVITELAQQA*GQFTDN
Trigger: GTTATCTGTAAACTGACCCCAGGCCTGTTGAGCCAG...CTCAGTGATGACGTCTGTCAGCTGATGCTCATCCGCTACGGCGGCCCCCGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR CCA 90 bp GTGGGCATGGGTTGGTCTCAGCCAAAGGCTGCTCTTGGGCCACATGCAGAGTCTAAGGCCAGGATCCCCTaGCAGGCTTCCAGGCTAAAG +
Preference number: 4 (lower is better)
Translates to: VGMGWSQPKAALGPHAESKARIP*QASRLK
Trigger: CTTTAGCCTGGAAGCCTGCCAGGGGATCCTGGCCTT...AGACTCTGCATGTGGCCCAAGAGCAGCCTTTGGCTGAGACCAACCCATGCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR TCA 90 bp AGAGAAACCTTCCCAGCTGAGAAGGTGACGGCTAGTGAGGCTGTCCTGAAGATCGGCCGCCGTAGCGGATaGGCATCAGCTGACAGACGT +
Preference number: 4 (lower is better)
Translates to: RETFPAEKVTASEAVLKIGRRSG*ASADRR
Trigger: ACGTCTGTCAGCTGATGCTCATCCGCTACGGCGGCC...GATCTTCAGGACAGCCTCACTAGCCGTCACCTTCTCAGCTGGGAAGGTTTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR TCA 90 bp CTGGAGGCGGGGGCCGCCGTAGCGGATGAGCATCAGCTGACAGACGTCATCACTCCATCCCCAAACAGCTaGAACTTAGCCTATGTCTCT +
Preference number: 4 (lower is better)
Translates to: LEAGAAVADEHQLTDVITPSPNS*NLAYVS
Trigger: AGAGACATAGGCTAAGTTTCAGCTGTTTGGGGATGG...AGTGATGACGTCTGTCAGCTGATGCTCATCCGCTACGGCGGCCCCCGCCTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR GCA 90 bp GCATTAAGGTCCAGTAAGGCCAGGATCCCCTGGCAGGCTTCCAGGCTAAAGAAGAACTGGGGATTGCTGTaGAGCTCCGGGGGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: ALRSSKARIPWQASRLKKNWGLL*SSGGLF
Trigger: GAAGAGGCCCCCGGAGCTGCACAGCAATCCCCAGTT...CTTCTTTAGCCTGGAAGCCTGCCAGGGGATCCTGGCCTTACTGGACCTTAATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR GCA 90 bp GAGGCGGGGGCCGCCGTAGCGGATGAGCATCAGCTGACAGACGTCATCACTGAGACAGACAGCAGGAACTaGGGGTTCTTCCAAAATGTG +
Preference number: 4 (lower is better)
Translates to: EAGAAVADEHQLTDVITETDSRN*GFFQNV
Trigger: CACATTTTGGAAGAACCCGCAGTTCCTGCTGTCTGT...CTCAGTGATGACGTCTGTCAGCTGATGCTCATCCGCTACGGCGGCCCCCGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR GCA 90 bp GTTGTATGGAGGCTAACCACACCAGCTCTGGAGTCAGAATGCTTAGGCCATGTCCGCTTGCGGCACCTGTaGCTGGGCTTCTGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: VVWRLTTPALESECLGHVRLRHL*LGFWSR
Trigger: CCTGCTCCAGAAGCCCAGGCACAGGTGCCGCAAGCG...GACATGGCCTAAGCATTCTGACTCCAGAGCTGGTGTGGTTAGCCTCCATACAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp GTGGGCATGGGTTGGTCTCAGCCAAAGGCTGCTCTTGGGCCACATGCAGAGTCTCAGAGACATGGCAGGTaGTGGGTACAGTCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: VGMGWSQPKAALGPHAESQRHGR*WVQSSE
Trigger: CTCACTGGACTGTACCCACCACCTGCCATGTCTCTG...AGACTCTGCATGTGGCCCAAGAGCAGCCTTTGGCTGAGACCAACCCATGCCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp GCATTAAGGTCCAGTAAGGCCAGGATCCCCTGGCAGGCTTCCAGGCTAAAGAAGGTGTACGTCCACTTCTaGGCCGCCTCCTGGCTCAAC +
Preference number: 4 (lower is better)
Translates to: ALRSSKARIPWQASRLKKVYVHF*AASWLN
Trigger: GTTGAGCCAGGAGGCGGCCCAGAAGTGGACGTACAC...CTTCTTTAGCCTGGAAGCCTGCCAGGGGATCCTGGCCTTACTGGACCTTAATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR CCA 90 bp CTGGAGGCGGGGGCCGCCGTAGCGGATGAGCATCAGCTGACAGACGTCATCACTCATCATCATCCACTCTaGCTTCTGGAGGTATATCCC +
Preference number: 4 (lower is better)
Translates to: LEAGAAVADEHQLTDVITHHHPL*LLEVYP
Trigger: GGGATATACCTCCAGAAGCCAGAGTGGATGATGATG...AGTGATGACGTCTGTCAGCTGATGCTCATCCGCTACGGCGGCCCCCGCCTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR CCA 90 bp GTGGGCATGGGTTGGTCTCAGCCAAAGGCTGCTCTTGGGCCACATGCAGAGTCTCCAGCCCACCCCACCTaGACTCTGCCAATTCTCTTA +
Preference number: 4 (lower is better)
Translates to: VGMGWSQPKAALGPHAESPAHPT*TLPILL
Trigger: TAAGAGAATTGGCAGAGTCCAGGTGGGGTGGGCTGG...AGACTCTGCATGTGGCCCAAGAGCAGCCTTTGGCTGAGACCAACCCATGCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp GTGGGCATGGGTTGGTCTCAGCCAAAGGCTGCTCTTGGGCCACATGCAGAGTCTGAGACAAAGACCAGCTaGCCAGCCTCATTCACAGGC +
Preference number: 4 (lower is better)
Translates to: VGMGWSQPKAALGPHAESETKTS*PASFTG
Trigger: GCCTGTGAATGAGGCTGGCCAGCTGGTCTTTGTCTC...AGACTCTGCATGTGGCCCAAGAGCAGCCTTTGGCTGAGACCAACCCATGCCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403897.4
CDS-3UTR TCA 90 bp GCGTGCAGCTGCTCCCAGTTCAGGTATCCTGACCCACGGTCTTGCTTGTGGAAATCTGCTCCCCAGACTTaGCCAGGTCATCTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: ACSCSQFRYPDPRSCLWKSAPQT*PGHLVQ
Trigger: CTGAACCAGATGACCTGGTCAAGTCTGGGGAGCAGA...TTTCCACAAGCAAGACCGTGGGTCAGGATACCTGAACTGGGAGCAGCTGCACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR GCA 90 bp GCATTAAGGTCCAGTAAGGCCAGGATCCCCTGGCAGGCTTCCAGGCTAAAGAAGGCGCCAGCTTCCATCTaGATCGGAAAGGTGGCCACA +
Preference number: 4 (lower is better)
Translates to: ALRSSKARIPWQASRLKKAPASI*IGKVAT
Trigger: TGTGGCCACCTTTCCGATGCAGATGGAAGCTGGCGC...CTTCTTTAGCCTGGAAGCCTGCCAGGGGATCCTGGCCTTACTGGACCTTAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR GCA 90 bp GTAGGGTGGGCATGGGTTGGTCTCAGCCAAAGGCTGCTCTTGGGCCACATGCAGTTCCAAAATGTGTCCTaGAGCAACTGCCTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: VGWAWVGLSQRLLLGHMQFQNVS*SNCLWP
Trigger: TGGCCAGAGGCAGTTGCTGCAGGACACATTTTGGAA...CTGCATGTGGCCCAAGAGCAGCCTTTGGCTGAGACCAACCCATGCCCACCCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR GCA 90 bp GTAGGGTGGGCATGGGTTGGTCTCAGCCAAAGGCTGCTCTTGGGCCACATGCAGACCCCACCTGGACTCTaGCAATTCTCTTACTGTCTG +
Preference number: 4 (lower is better)
Translates to: VGWAWVGLSQRLLLGHMQTPPGL*QFSYCL
Trigger: CAGACAGTAAGAGAATTGGCAGAGTCCAGGTGGGGT...CTGCATGTGGCCCAAGAGCAGCCTTTGGCTGAGACCAACCCATGCCCACCCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp ACCTTCCCAGCTGAGAAGGTGACGGCTAGTGAGGCTGTCCTGAAGATCAGTAAGCGATGGAGCTCAGGGTaGCCGGGAAGCTGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: TFPAEKVTASEAVLKISKRWSSG*PGSWCL
Trigger: AAGACACCAGCTTCCCGGCCACCCTGAGCTCCATCG...CTTACTGATCTTCAGGACAGCCTCACTAGCCGTCACCTTCTCAGCTGGGAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp GCATTAAGGTCCAGTAAGGCCAGGATCCCCTGGCAGGCTTCCAGGCTAAAGAAGAGGGTGGGCATGGGTTaGTCTCAGCCAAAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: ALRSSKARIPWQASRLKKRVGMG*SQPKAA
Trigger: AGCAGCCTTTGGCTGAGACCAACCCATGCCCACCCT...CTTCTTTAGCCTGGAAGCCTGCCAGGGGATCCTGGCCTTACTGGACCTTAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR TCA 90 bp GCCAGGTTGATGGTCATTGTCACCCCTCCAGTGAAGTCTACAAGGGCTTCAGACGGGTCTGGCAGCCAATaGGGGTTCTGTTGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: ARLMVIVTPPVKSTRASDGSGSQ*GFCCRW
Trigger: CCACCTACAACAGAACCCTCATTGGCTGCCAGACCC...GTCTGAAGCCCTTGTAGACTTCACTGGAGGGGTGACAATGACCATCAACCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR GCA 90 bp ACCTTCCCAGCTGAGAAGGTGACGGCTAGTGAGGCTGTCCTGAAGATCAGTAAGGCGCCAGCTTCCATCTaGATCGGAAAGGTGGCCACA +
Preference number: 4 (lower is better)
Translates to: TFPAEKVTASEAVLKISKAPASI*IGKVAT
Trigger: TGTGGCCACCTTTCCGATGCAGATGGAAGCTGGCGC...CTTACTGATCTTCAGGACAGCCTCACTAGCCGTCACCTTCTCAGCTGGGAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR GCA 90 bp TACCCCATAAGCTACGCTTTCAAAGTGCTCCTTTCTTCTGGTACAGTACCCATCCGGGGTGGCAGCTTCTaGAGCAGGGAGCCACTGCCG +
Preference number: 4 (lower is better)
Translates to: YPISYAFKVLLSSGTVPIRGGSF*SREPLP
Trigger: CGGCAGTGGCTCCCTGCTGCAGAAGCTGCCACCCCG...GATGGGTACTGTACCAGAAGAAAGGAGCACTTTGAAAGCGTAGCTTATGGGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR GCA 90 bp GTTGTATGGAGGCTAACCACACCAGCTCTGGAGTCAGAATGCTTAGGCCATGTCCCTTCCCTTTCTGCATaGTGGCCATGCACGGGGAGG +
Preference number: 4 (lower is better)
Translates to: VVWRLTTPALESECLGHVPSLSA*WPCTGR
Trigger: CCTCCCCGTGCATGGCCAGCATGCAGAAAGGGAAGG...GACATGGCCTAAGCATTCTGACTCCAGAGCTGGTGTGGTTAGCCTCCATACAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp GCCAGGTTGATGGTCATTGTCACCCCTCCAGTGAAGTCTACAAGGGCTTCAGACCTCAGGAACTGGTGCTaGTCCTGGGGTCCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: ARLMVIVTPPVKSTRASDLRNWC*SWGPSA
Trigger: TGCTGAAGGACCCCAGGACCAGCACCAGTTCCTGAG...GTCTGAAGCCCTTGTAGACTTCACTGGAGGGGTGACAATGACCATCAACCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR CCA 90 bp GTGACAAGGTTGTGGCCTCAGGGAAGGATGGCTAGCTTTTACAAATCTGATGTAGGGAGCCACTGCCGATaGAGCTCAGGGTGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: VTRLWPQGRMASFYKSDVGSHCR*SSGWPG
Trigger: TCCCGGCCACCCTGAGCTCCATCGGCAGTGGCTCCC...TACATCAGATTTGTAAAAGCTAGCCATCCTTCCCTGAGGCCACAACCTTGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp ACCTTCCCAGCTGAGAAGGTGACGGCTAGTGAGGCTGTCCTGAAGATCAGTAAGTCCCCTGAGTGGGTCTaGCAGCCAATGAGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: TFPAEKVTASEAVLKISKSPEWV*QPMRVL
Trigger: CAGAACCCTCATTGGCTGCCAGACCCACTCAGGGGA...CTTACTGATCTTCAGGACAGCCTCACTAGCCGTCACCTTCTCAGCTGGGAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp ACCTTCCCAGCTGAGAAGGTGACGGCTAGTGAGGCTGTCCTGAAGATCAGTAAGAAGGCCAGGATCCCCTaGCAGGCTTCCAGGCTAAAG +
Preference number: 4 (lower is better)
Translates to: TFPAEKVTASEAVLKISKKARIP*QASRLK
Trigger: CTTTAGCCTGGAAGCCTGCCAGGGGATCCTGGCCTT...CTTACTGATCTTCAGGACAGCCTCACTAGCCGTCACCTTCTCAGCTGGGAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp GTTGTATGGAGGCTAACCACACCAGCTCTGGAGTCAGAATGCTTAGGCCATGTCTCCCTTTCTGCATGCTaGCCATGCACGGGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: VVWRLTTPALESECLGHVSLSAC*PCTGRA
Trigger: AGCCCTCCCCGTGCATGGCCAGCATGCAGAAAGGGA...GACATGGCCTAAGCATTCTGACTCCAGAGCTGGTGTGGTTAGCCTCCATACAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp GTAGGGTGGGCATGGGTTGGTCTCAGCCAAAGGCTGCTCTTGGGCCACATGCAGGGCCTCAGGGAAGGATaGCTAGCTTTTACAAATCTG +
Preference number: 4 (lower is better)
Translates to: VGWAWVGLSQRLLLGHMQGLREG*LAFTNL
Trigger: CAGATTTGTAAAAGCTAGCCATCCTTCCCTGAGGCC...CTGCATGTGGCCCAAGAGCAGCCTTTGGCTGAGACCAACCCATGCCCACCCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp GTGGGCATGGGTTGGTCTCAGCCAAAGGCTGCTCTTGGGCCACATGCAGAGTCTAGAGGCAGTGTTGTATaGAGGCTAACCACACCAGCT +
Preference number: 4 (lower is better)
Translates to: VGMGWSQPKAALGPHAESRGSVV*RLTTPA
Trigger: AGCTGGTGTGGTTAGCCTCCATACAACACTGCCTCT...AGACTCTGCATGTGGCCCAAGAGCAGCCTTTGGCTGAGACCAACCCATGCCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR TCA 90 bp GTTGTATGGAGGCTAACCACACCAGCTCTGGAGTCAGAATGCTTAGGCCATGTCGGGCTTCTGCCAGGTTaGTGGTCATTGTCACCCCTC +
Preference number: 4 (lower is better)
Translates to: VVWRLTTPALESECLGHVGLLPG*WSLSPL
Trigger: GAGGGGTGACAATGACCATCAACCTGGCAGAAGCCC...GACATGGCCTAAGCATTCTGACTCCAGAGCTGGTGTGGTTAGCCTCCATACAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR TCA 90 bp ACCTTCCCAGCTGAGAAGGTGACGGCTAGTGAGGCTGTCCTGAAGATCAGTAAGATATGCAGGGCACGATaGGGTACGTCCCTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: TFPAEKVTASEAVLKISKICRAR*GTSLVP
Trigger: TGGAACCAGGGACGTACCTCATCGTGCCCTGCATAT...CTTACTGATCTTCAGGACAGCCTCACTAGCCGTCACCTTCTCAGCTGGGAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR TCA 90 bp GCCAGGTTGATGGTCATTGTCACCCCTCCAGTGAAGTCTACAAGGGCTTCAGACCCAGTTCAGGTATCCTaGCCCACGGTCTTGCTTGTG +
Preference number: 4 (lower is better)
Translates to: ARLMVIVTPPVKSTRASDPVQVS*PTVLLV
Trigger: CACAAGCAAGACCGTGGGTCAGGATACCTGAACTGG...GTCTGAAGCCCTTGTAGACTTCACTGGAGGGGTGACAATGACCATCAACCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR TCA 90 bp ACCTTCCCAGCTGAGAAGGTGACGGCTAGTGAGGCTGTCCTGAAGATCAGTAAGCCAGTTCAGGTATCCTaGCCCACGGTCTTGCTTGTG +
Preference number: 4 (lower is better)
Translates to: TFPAEKVTASEAVLKISKPVQVS*PTVLLV
Trigger: CACAAGCAAGACCGTGGGTCAGGATACCTGAACTGG...CTTACTGATCTTCAGGACAGCCTCACTAGCCGTCACCTTCTCAGCTGGGAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR GCA 90 bp AGAGAAACCTTCCCAGCTGAGAAGGTGACGGCTAGTGAGGCTGTCCTGAAGATCATGGCAGCGTGCAGCTaGTCCCAGTTCAGGTATCCT +
Preference number: 4 (lower is better)
Translates to: RETFPAEKVTASEAVLKIMAACS*SQFRYP
Trigger: AGGATACCTGAACTGGGAGCAGCTGCACGCTGCCAT...GATCTTCAGGACAGCCTCACTAGCCGTCACCTTCTCAGCTGGGAAGGTTTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR GCA 90 bp AGAGAAACCTTCCCAGCTGAGAAGGTGACGGCTAGTGAGGCTGTCCTGAAGATCATGCACGGGGAGGGCTaGAGAAGAGAAACCTTCCCA +
Preference number: 4 (lower is better)
Translates to: RETFPAEKVTASEAVLKIMHGEG*RRETFP
Trigger: TGGGAAGGTTTCTCTTCTGCAGCCCTCCCCGTGCAT...GATCTTCAGGACAGCCTCACTAGCCGTCACCTTCTCAGCTGGGAAGGTTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp GCGTGCAGCTGCTCCCAGTTCAGGTATCCTGACCCACGGTCTTGCTTGTGGAAAAGCGAGGCTGTTGAGTaGGATGGTGCAATCAAGATC +
Preference number: 4 (lower is better)
Translates to: ACSCSQFRYPDPRSCLWKSEAVE*DGAIKI
Trigger: GATCTTGATTGCACCATCCCACTCAACAGCCTCGCT...TTTCCACAAGCAAGACCGTGGGTCAGGATACCTGAACTGGGAGCAGCTGCACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR CCA 90 bp ACCTTCCCAGCTGAGAAGGTGACGGCTAGTGAGGCTGTCCTGAAGATCAGTAAGAAGATGCTCAGGAACTaGTGCTGGTCCTGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: TFPAEKVTASEAVLKISKKMLRN*CWSWGP
Trigger: AGGACCCCAGGACCAGCACCAGTTCCTGAGCATCTT...CTTACTGATCTTCAGGACAGCCTCACTAGCCGTCACCTTCTCAGCTGGGAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR CCA 90 bp ACCTTCCCAGCTGAGAAGGTGACGGCTAGTGAGGCTGTCCTGAAGATCAGTAAGCCTCCTAGAGTACCTTaGCGCCAGCTTCCATCTGCA +
Preference number: 4 (lower is better)
Translates to: TFPAEKVTASEAVLKISKPPRVP*RQLPSA
Trigger: TGCAGATGGAAGCTGGCGCCAAGGTACTCTAGGAGG...CTTACTGATCTTCAGGACAGCCTCACTAGCCGTCACCTTCTCAGCTGGGAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp AGAGAAACCTTCCCAGCTGAGAAGGTGACGGCTAGTGAGGCTGTCCTGAAGATCATCTTCTCCCCTGAGTaGGTCTGGCAGCCAATGAGG +
Preference number: 4 (lower is better)
Translates to: RETFPAEKVTASEAVLKIIFSPE*VWQPMR
Trigger: CCTCATTGGCTGCCAGACCCACTCAGGGGAGAAGAT...GATCTTCAGGACAGCCTCACTAGCCGTCACCTTCTCAGCTGGGAAGGTTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp GAGGCGGGGGCCGCCGTAGCGGATGAGCATCAGCTGACAGACGTCATCACTGAGTCTTGGGTTAAGTTTTaGAAGACATCCTCCATGTTC +
Preference number: 4 (lower is better)
Translates to: EAGAAVADEHQLTDVITESWVKF*KTSSMF
Trigger: GAACATGGAGGATGTCTTCCAAAACTTAACCCAAGA...CTCAGTGATGACGTCTGTCAGCTGATGCTCATCCGCTACGGCGGCCCCCGCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR CCA 90 bp GTAGGGTGGGCATGGGTTGGTCTCAGCCAAAGGCTGCTCTTGGGCCACATGCAGAGTGCTCCTTTCTTCTaGTACAGTACCCATCTGACA +
Preference number: 4 (lower is better)
Translates to: VGWAWVGLSQRLLLGHMQSAPFF*YSTHLT
Trigger: TGTCAGATGGGTACTGTACCAGAAGAAAGGAGCACT...CTGCATGTGGCCCAAGAGCAGCCTTTGGCTGAGACCAACCCATGCCCACCCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
3UTR CAA 72 bp AGGATGTCCCAGAGGTTGCCATGGGCTTCTGCCAGGTaGATGGTCATTGTCACCCCTCCAGTGAAGTCTACA +
Preference number: 4 (lower is better)
Translates to: RMSQRLPWASAR*MVIVTPPVKST
Trigger: TGTAGACTTCACTGGAGGGGTGACAATGACCATCAACCTGGCAGAAGCCCATGGCAACCTCTGGGACATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR GCA 90 bp GTTTTGGAAGACATCCTCCATGTTCTCTACACGCAGCATCAAGTGGATGAAACTGCCTCAGGGATCTCCTaGCCTCCTCGGGCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: VLEDILHVLYTQHQVDETASGIS*PPRASR
Trigger: TCTGGAGGCCCGAGGAGGGCAGGAGATCCCTGAGGC...AGTTTCATCCACTTGATGCTGCGTGTAGAGAACATGGAGGATGTCTTCCAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR GCA 90 bp CTGGAGGCGGGGGCCGCCGTAGCGGATGAGCATCAGCTGACAGACGTCATCACTGTTCTGAAGTTGAACTaGATTAATCTCTGGATGCTT +
Preference number: 4 (lower is better)
Translates to: LEAGAAVADEHQLTDVITVLKLN*INLWML
Trigger: AAGCATCCAGAGATTAATGCAGTTCAACTTCAGAAC...AGTGATGACGTCTGTCAGCTGATGCTCATCCGCTACGGCGGCCCCCGCCTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR GCA 90 bp AAGAACTCAGGGGGCAGTCTCCTCTGGTCATCATGGTACTTGTTCATCCTATACTCCCTCATGGCAGCGTaGAGCTGCTCCCAGTTCAGG +
Preference number: 4 (lower is better)
Translates to: KNSGGSLLWSSWYLFILYSLMAA*SCSQFR
Trigger: CCTGAACTGGGAGCAGCTGCACGCTGCCATGAGGGA...GTATAGGATGAACAAGTACCATGATGACCAGAGGAGACTGCCCCCTGAGTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR GCA 90 bp ACCTTCCCAGCTGAGAAGGTGACGGCTAGTGAGGCTGTCCTGAAGATCAGTAAGTTCCTGAGGAGTCTCTaGTGCTCCTGCACAGGAGAT +
Preference number: 4 (lower is better)
Translates to: TFPAEKVTASEAVLKISKFLRSL*CSCTGD
Trigger: ATCTCCTGTGCAGGAGCAGCAGAGACTCCTCAGGAA...CTTACTGATCTTCAGGACAGCCTCACTAGCCGTCACCTTCTCAGCTGGGAAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403897.4
CDS-3UTR CCA 90 bp CATAAGCTACGCTTTCAAAGTGCTCCTTTCTTCTGGTACAGTACCCATCTGACATTCTGGGCCGCCTCCTaGCTCAACAGGCCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: HKLRFQSAPFFWYSTHLTFWAAS*LNRPGV
Trigger: GACCCCAGGCCTGTTGAGCCAGGAGGCGGCCCAGAA...TGTCAGATGGGTACTGTACCAGAAGAAAGGAGCACTTTGAAAGCGTAGCTTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp GTTGTATGGAGGCTAACCACACCAGCTCTGGAGTCAGAATGCTTAGGCCATGTCGATGAGGTACGTCCCTaGTTCCAGACACAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: VVWRLTTPALESECLGHVDEVRP*FQTQLL
Trigger: CAGGAGCTGTGTCTGGAACCAGGGACGTACCTCATC...GACATGGCCTAAGCATTCTGACTCCAGAGCTGGTGTGGTTAGCCTCCATACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp GAGGCGGGGGCCGCCGTAGCGGATGAGCATCAGCTGACAGACGTCATCACTGAGGGAGTATTTCAGATTTaGGGTTTTCAGATTTGGGAT +
Preference number: 4 (lower is better)
Translates to: EAGAAVADEHQLTDVITEGVFQI*GFQIWD
Trigger: ATCCCAAATCTGAAAACCCCAAATCTGAAATACTCC...CTCAGTGATGACGTCTGTCAGCTGATGCTCATCCGCTACGGCGGCCCCCGCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR CCA 90 bp GTGGGCATGGGTTGGTCTCAGCCAAAGGCTGCTCTTGGGCCACATGCAGAGTCTAGTGCTCCTTTCTTCTaGTACAGTACCCATCTGACA +
Preference number: 4 (lower is better)
Translates to: VGMGWSQPKAALGPHAESSAPFF*YSTHLT
Trigger: TGTCAGATGGGTACTGTACCAGAAGAAAGGAGCACT...AGACTCTGCATGTGGCCCAAGAGCAGCCTTTGGCTGAGACCAACCCATGCCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR TCA 90 bp ACCTTCCCAGCTGAGAAGGTGACGGCTAGTGAGGCTGTCCTGAAGATCAGTAAGTTCTCAGTGAAACTCTaGTTCAGGGGAACAACCCGG +
Preference number: 4 (lower is better)
Translates to: TFPAEKVTASEAVLKISKFSVKL*FRGTTR
Trigger: CCGGGTTGTTCCCCTGAATCAGAGTTTCACTGAGAA...CTTACTGATCTTCAGGACAGCCTCACTAGCCGTCACCTTCTCAGCTGGGAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR GCA 90 bp GTTGTATGGAGGCTAACCACACCAGCTCTGGAGTCAGAATGCTTAGGCCATGTCCTCAGGATGTCCTGGTaGAAGGCCAGAGCTTGCAAA +
Preference number: 4 (lower is better)
Translates to: VVWRLTTPALESECLGHVLRMSW*KARACK
Trigger: TTTGCAAGCTCTGGCCTTGCACCAGGACATCCTGAG...GACATGGCCTAAGCATTCTGACTCCAGAGCTGGTGTGGTTAGCCTCCATACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR GCA 90 bp CTACCCCATAAGCTACGCTTTCAAAGTGCTCCTTTCTTCTGGTACAGTACCCATGTGTCCTGCAGCAACTaGCTCTGGCCACCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: LPHKLRFQSAPFFWYSTHVSCSN*LWPPAV
Trigger: CACAGCTGGTGGCCAGAGGCAGTTGCTGCAGGACAC...ATGGGTACTGTACCAGAAGAAAGGAGCACTTTGAAAGCGTAGCTTATGGGGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR GCA 90 bp ACAGGTGCTCAAATCTCCTTTAGTCCTCTGCCAATGGACACACTTTTATCTCTTGCCTCAGGGATCTCCTaGCCTCCTCGGGCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: TGAQISFSPLPMDTLLSLASGIS*PPRASR
Trigger: TCTGGAGGCCCGAGGAGGGCAGGAGATCCCTGAGGC...AAGAGATAAAAGTGTGTCCATTGGCAGAGGACTAAAGGAGATTTGAGCACCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR GCA 90 bp TACCCCATAAGCTACGCTTTCAAAGTGCTCCTTTCTTCTGGTACAGTACCCATCCCTTCCCTTTCTGCATaGTGGCCATGCACGGGGAGG +
Preference number: 4 (lower is better)
Translates to: YPISYAFKVLLSSGTVPIPSLSA*WPCTGR
Trigger: CCTCCCCGTGCATGGCCAGCATGCAGAAAGGGAAGG...GATGGGTACTGTACCAGAAGAAAGGAGCACTTTGAAAGCGTAGCTTATGGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR GCA 90 bp GTAGGGTGGGCATGGGTTGGTCTCAGCCAAAGGCTGCTCTTGGGCCACATGCAGTCTCCTTTAGTCCTCTaGCAATGGACACACTTTTAT +
Preference number: 4 (lower is better)
Translates to: VGWAWVGLSQRLLLGHMQSPLVL*QWTHFY
Trigger: ATAAAAGTGTGTCCATTGGCAGAGGACTAAAGGAGA...CTGCATGTGGCCCAAGAGCAGCCTTTGGCTGAGACCAACCCATGCCCACCCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR GCA 90 bp ACCTTCCCAGCTGAGAAGGTGACGGCTAGTGAGGCTGTCCTGAAGATCAGTAAGCTGCACAGGAGATTTTaGTTCTTTAAGCGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: TFPAEKVTASEAVLKISKLHRRF*FFKRLG
Trigger: GCCCAGGCGCTTAAAGAAGCAAAATCTCCTGTGCAG...CTTACTGATCTTCAGGACAGCCTCACTAGCCGTCACCTTCTCAGCTGGGAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403897.4
CDS-3UTR CCA 90 bp AGAATGCTTAGGCCATGTCAGGTAACATCTCCGCTTGTGACAAGGTTGTGGCCTTCTGCATCGGAAAGGTaGCCACAGAGACATGGCAGG +
Preference number: 4 (lower is better)
Translates to: RMLRPCQVTSPLVTRLWPSASER*PQRHGR
Trigger: CCTGCCATGTCTCTGTGGCCACCTTTCCGATGCAGA...AGGCCACAACCTTGTCACAAGCGGAGATGTTACCTGACATGGCCTAAGCATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp GTAGGGTGGGCATGGGTTGGTCTCAGCCAAAGGCTGCTCTTGGGCCACATGCAGTTAGTCCTCTGCCAATaGACACACTTTTATCTCTTC +
Preference number: 4 (lower is better)
Translates to: VGWAWVGLSQRLLLGHMQLVLCQ*THFYLF
Trigger: GAAGAGATAAAAGTGTGTCCATTGGCAGAGGACTAA...CTGCATGTGGCCCAAGAGCAGCCTTTGGCTGAGACCAACCCATGCCCACCCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR TCA 90 bp AGAGAAACCTTCCCAGCTGAGAAGGTGACGGCTAGTGAGGCTGTCCTGAAGATCATTGACCTCAGCAACTaGAGGAGAGGCGATTCAAAG +
Preference number: 4 (lower is better)
Translates to: RETFPAEKVTASEAVLKIIDLSN*RRGDSK
Trigger: CTTTGAATCGCCTCTCCTTCAGTTGCTGAGGTCAAT...GATCTTCAGGACAGCCTCACTAGCCGTCACCTTCTCAGCTGGGAAGGTTTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR TCA 90 bp ACCTTCCCAGCTGAGAAGGTGACGGCTAGTGAGGCTGTCCTGAAGATCAGTAAGAGGGGTTCCGTAGCTTaGCGAGATATTCAGGTCTAT +
Preference number: 4 (lower is better)
Translates to: TFPAEKVTASEAVLKISKRGSVA*RDIQVY
Trigger: ATAGACCTGAATATCTCGTCAAGCTACGGAACCCCT...CTTACTGATCTTCAGGACAGCCTCACTAGCCGTCACCTTCTCAGCTGGGAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR TCA 90 bp AGAGAAACCTTCCCAGCTGAGAAGGTGACGGCTAGTGAGGCTGTCCTGAAGATCATGTCTAAAGTCACTTaGGTTTGCAGCCACAGAGGC +
Preference number: 4 (lower is better)
Translates to: RETFPAEKVTASEAVLKIMSKVT*VCSHRG
Trigger: GCCTCTGTGGCTGCAAACTCAAGTGACTTTAGACAT...GATCTTCAGGACAGCCTCACTAGCCGTCACCTTCTCAGCTGGGAAGGTTTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR GCA 90 bp CATTGTTCTGGTTTTGCACCTGTATTCTTGGTTGAGAGGGATGACATAAACAAGGGGACACCAGCACGCTaGAGGGCCTCAGGGATCTCC +
Preference number: 4 (lower is better)
Translates to: HCSGFAPVFLVERDDINKGTPAR*RASGIS
Trigger: GGAGATCCCTGAGGCCCTGCAGCGTGCTGGTGTCCC...CTTGTTTATGTCATCCCTCTCAACCAAGAATACAGGTGCAAAACCAGAACAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR GCA 90 bp GCTCAAATCTCCTTTAGTCCTCTGCCAATGGACACACTTTTATCTCTTCATTCAGGAGAGGCTTCCGCTTaGGGCACCTGTGCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: AQISFSPLPMDTLLSLHSGEASA*GTCAWA
Trigger: AGCCCAGGCACAGGTGCCGCAAGCGGAAGCCTCTCC...TGAATGAAGAGATAAAAGTGTGTCCATTGGCAGAGGACTAAAGGAGATTTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR GCA 90 bp GTAGGGTGGGCATGGGTTGGTCTCAGCCAAAGGCTGCTCTTGGGCCACATGCAGCGACACCAGAATTGCTaGCAATTTCATAAAAGATGT +
Preference number: 4 (lower is better)
Translates to: VGWAWVGLSQRLLLGHMQRHQNC*QFHKRC
Trigger: ACATCTTTTATGAAATTGGCAGCAATTCTGGTGTCG...CTGCATGTGGCCCAAGAGCAGCCTTTGGCTGAGACCAACCCATGCCCACCCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR GCA 90 bp GTAGGGTGGGCATGGGTTGGTCTCAGCCAAAGGCTGCTCTTGGGCCACATGCAGAGACGACACCAGAATTaGTGCCAATTTCATAAAAGA +
Preference number: 4 (lower is better)
Translates to: VGWAWVGLSQRLLLGHMQRRHQN*CQFHKR
Trigger: TCTTTTATGAAATTGGCAGCAATTCTGGTGTCGTCT...CTGCATGTGGCCCAAGAGCAGCCTTTGGCTGAGACCAACCCATGCCCACCCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR GCA 90 bp ACCTTCCCAGCTGAGAAGGTGACGGCTAGTGAGGCTGTCCTGAAGATCAGTAAGAGTCTCTGCTGCTCCTaGACAGGAGATTTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: TFPAEKVTASEAVLKISKSLCCS*TGDFAS
Trigger: AGAAGCAAAATCTCCTGTGCAGGAGCAGCAGAGACT...CTTACTGATCTTCAGGACAGCCTCACTAGCCGTCACCTTCTCAGCTGGGAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403897.4
CDS-3UTR CCA 90 bp CTACCCCATAAGCTACGCTTTCAAAGTGCTCCTTTCTTCTGGTACAGTACCCATATCTCCCCTCCCGCATaGTGTACGTCCACTTCTGGG +
Preference number: 4 (lower is better)
Translates to: LPHKLRFQSAPFFWYSTHISPPA*CTSTSG
Trigger: CCCAGAAGTGGACGTACACCATGCGGGAGGGGAGAT...ATGGGTACTGTACCAGAAGAAAGGAGCACTTTGAAAGCGTAGCTTATGGGGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp TTTACAGATAACCAGGAGCACGAAATGTGTTTTAAAGTCCTGCAGCGTCATCCATGCGGCACCTGTGCCTaGGCTTCTGGAGCAGGGACA +
Preference number: 4 (lower is better)
Translates to: FTDNQEHEMCFKVLQRHPCGTCA*ASGAGT
Trigger: TGTCCCTGCTCCAGAAGCCCAGGCACAGGTGCCGCA...TGGATGACGCTGCAGGACTTTAAAACACATTTCGTGCTCCTGGTTATCTGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR CCA 90 bp AGAGAAACCTTCCCAGCTGAGAAGGTGACGGCTAGTGAGGCTGTCCTGAAGATCATCCACTCTGGCTTCTaGAGGTATATCCCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: RETFPAEKVTASEAVLKIIHSGF*RYIPLP
Trigger: TGGCAAAGGGATATACCTCCAGAAGCCAGAGTGGAT...GATCTTCAGGACAGCCTCACTAGCCGTCACCTTCTCAGCTGGGAAGGTTTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp AGAATGCTTAGGCCATGTCAGGTAACATCTCCGCTTGTGACAAGGTTGTGGCCTGCTTCTTTAAGCGCCTaGGCAAGCTCTAATCCCGGT +
Preference number: 4 (lower is better)
Translates to: RMLRPCQVTSPLVTRLWPASLSA*ASSNPG
Trigger: ACCGGGATTAGAGCTTGCCCAGGCGCTTAAAGAAGC...AGGCCACAACCTTGTCACAAGCGGAGATGTTACCTGACATGGCCTAAGCATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403897.4
CDS-3UTR TCA 90 bp GACCCCATCCCCAAACAGCTGAAACTTAGCCTATGTCTCTATCAATTTGCAGATGGGCTTCTGCCAGGTTaGTGGTCATTGTCACCCCTC +
Preference number: 4 (lower is better)
Translates to: DPIPKQLKLSLCLYQFADGLLPG*WSLSPL
Trigger: GAGGGGTGACAATGACCATCAACCTGGCAGAAGCCC...ATCTGCAAATTGATAGAGACATAGGCTAAGTTTCAGCTGTTTGGGGATGGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR TCA 90 bp ACCTTCCCAGCTGAGAAGGTGACGGCTAGTGAGGCTGTCCTGAAGATCAGTAAGTACTGTCTGTGTTTCTaGAAGCCCACTATATCCCTG +
Preference number: 4 (lower is better)
Translates to: TFPAEKVTASEAVLKISKYCLCF*KPTISL
Trigger: CAGGGATATAGTGGGCTTTCAGAAACACAGACAGTA...CTTACTGATCTTCAGGACAGCCTCACTAGCCGTCACCTTCTCAGCTGGGAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR GCA 90 bp CAATTTGCAGATGCTGGGACTAAATGTCTAAGGATATATCATTCCCATTTCAGACGGGGTGGCAGCTTCTaGAGCAGGGAGCCACTGCCG +
Preference number: 4 (lower is better)
Translates to: QFADAGTKCLRIYHSHFRRGGSF*SREPLP
Trigger: CGGCAGTGGCTCCCTGCTGCAGAAGCTGCCACCCCG...TCTGAAATGGGAATGATATATCCTTAGACATTTAGTCCCAGCATCTGCAAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR GCA 90 bp ACAGGTGCTCAAATCTCCTTTAGTCCTCTGCCAATGGACACACTTTTATCTCTTAACTGGGGATTGCTGTaGAGCTCCGGGGGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: TGAQISFSPLPMDTLLSLNWGLL*SSGGLF
Trigger: GAAGAGGCCCCCGGAGCTGCACAGCAATCCCCAGTT...AAGAGATAAAAGTGTGTCCATTGGCAGAGGACTAAAGGAGATTTGAGCACCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR GCA 90 bp GTGGGCATGGGTTGGTCTCAGCCAAAGGCTGCTCTTGGGCCACATGCAGAGTCTGTGAAGAATTCATCCTaGCTTTCATTTTGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: VGMGWSQPKAALGPHAESVKNSS*LSFWSS
Trigger: AGAAGACCAAAATGAAAGGCAGGATGAATTCTTCAC...AGACTCTGCATGTGGCCCAAGAGCAGCCTTTGGCTGAGACCAACCCATGCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR GCA 90 bp GTTGTATGGAGGCTAACCACACCAGCTCTGGAGTCAGAATGCTTAGGCCATGTCTTCTCAGGAGTACAGTaGCATCATCATCCACTCTGG +
Preference number: 4 (lower is better)
Translates to: VVWRLTTPALESECLGHVFSGVQ*HHHPLW
Trigger: CCAGAGTGGATGATGATGGCACTGTACTCCTGAGAA...GACATGGCCTAAGCATTCTGACTCCAGAGCTGGTGTGGTTAGCCTCCATACAAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp TACCCCATAAGCTACGCTTTCAAAGTGCTCCTTTCTTCTGGTACAGTACCCATCTCTGCATCGGAAAGGTaGCCACAGAGACATGGCAGG +
Preference number: 4 (lower is better)
Translates to: YPISYAFKVLLSSGTVPISASER*PQRHGR
Trigger: CCTGCCATGTCTCTGTGGCCACCTTTCCGATGCAGA...GATGGGTACTGTACCAGAAGAAAGGAGCACTTTGAAAGCGTAGCTTATGGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp TACCCCATAAGCTACGCTTTCAAAGTGCTCCTTTCTTCTGGTACAGTACCCATCTCCCAGAGGTTGCCATaGGCTTCTGCCAGGTTGATG +
Preference number: 4 (lower is better)
Translates to: YPISYAFKVLLSSGTVPISQRLP*ASARLM
Trigger: CATCAACCTGGCAGAAGCCCATGGCAACCTCTGGGA...GATGGGTACTGTACCAGAAGAAAGGAGCACTTTGAAAGCGTAGCTTATGGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp AGAATGCTTAGGCCATGTCAGGTAACATCTCCGCTTGTGACAAGGTTGTGGCCTCTGGCTCAACAGGCCTaGGGTCAGTTTACAGATAAC +
Preference number: 4 (lower is better)
Translates to: RMLRPCQVTSPLVTRLWPLAQQA*GQFTDN
Trigger: GTTATCTGTAAACTGACCCCAGGCCTGTTGAGCCAG...AGGCCACAACCTTGTCACAAGCGGAGATGTTACCTGACATGGCCTAAGCATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp TGTTCTGGTTTTGCACCTGTATTCTTGGTTGAGAGGGATGACATAAACAAGGTGGTGTACGTCCACTTCTaGGCCGCCTCCTGGCTCAAC +
Preference number: 4 (lower is better)
Translates to: CSGFAPVFLVERDDINKVVYVHF*AASWLN
Trigger: GTTGAGCCAGGAGGCGGCCCAGAAGTGGACGTACAC...CACCTTGTTTATGTCATCCCTCTCAACCAAGAATACAGGTGCAAAACCAGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp GCTCAAATCTCCTTTAGTCCTCTGCCAATGGACACACTTTTATCTCTTCATTCATGCGGCACCTGTGCCTaGGCTTCTGGAGCAGGGACA +
Preference number: 4 (lower is better)
Translates to: AQISFSPLPMDTLLSLHSCGTCA*ASGAGT
Trigger: TGTCCCTGCTCCAGAAGCCCAGGCACAGGTGCCGCA...TGAATGAAGAGATAAAAGTGTGTCCATTGGCAGAGGACTAAAGGAGATTTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp AGAATGCTTAGGCCATGTCAGGTAACATCTCCGCTTGTGACAAGGTTGTGGCCTACGAACTCTGACTTCTaGTGGGCCTCCAATATGCAG +
Preference number: 4 (lower is better)
Translates to: RMLRPCQVTSPLVTRLWPTNSDF*WASNMQ
Trigger: CTGCATATTGGAGGCCCACCAGAAGTCAGAGTTCGT...AGGCCACAACCTTGTCACAAGCGGAGATGTTACCTGACATGGCCTAAGCATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp TGGAAAAAGGCCATTGTTCTGGTTTTGCACCTGTATTCTTGGTTGAGAGGGATGAGGGTGGGCATGGGTTaGTCTCAGCCAAAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: WKKAIVLVLHLYSWLRGMRVGMG*SQPKAA
Trigger: AGCAGCCTTTGGCTGAGACCAACCCATGCCCACCCT...CATCCCTCTCAACCAAGAATACAGGTGCAAAACCAGAACAATGGCCTTTTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp AGGTTGTGGCCTCAGGGAAGGATGGCTAGCTTTTACAAATCTGATGTAATCTTTTCCCTTTCTGCATGCTaGCCATGCACGGGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: RLWPQGRMASFYKSDVIFSLSAC*PCTGRA
Trigger: AGCCCTCCCCGTGCATGGCCAGCATGCAGAAAGGGA...AAAGATTACATCAGATTTGTAAAAGCTAGCCATCCTTCCCTGAGGCCACAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
3UTR CAA 72 bp AGGCCATGTCAGGTAACATCTCCGCTTGTGACAAGGTaGTGGCCTCAGGGAAGGATGGCTAGCTTTTACAAA +
Preference number: 4 (lower is better)
Translates to: RPCQVTSPLVTR*WPQGRMASFYK
Trigger: TTTGTAAAAGCTAGCCATCCTTCCCTGAGGCCACAACCTTGTCACAAGCGGAGATGTTACCTGACATGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR TCA 90 bp TGGAAAAAGGCCATTGTTCTGGTTTTGCACCTGTATTCTTGGTTGAGAGGGATGGTGGGTACAGTCCAGTaGGTCTTCCTGAGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: WKKAIVLVLHLYSWLRGMVGTVQ*VFLRSL
Trigger: GAGACTCCTCAGGAAGACTCACTGGACTGTACCCAC...CATCCCTCTCAACCAAGAATACAGGTGCAAAACCAGAACAATGGCCTTTTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR TCA 90 bp GTGACAAGGTTGTGGCCTCAGGGAAGGATGGCTAGCTTTTACAAATCTGATGTATTGTCACCCCTCCAGTaGAGTCTACAAGGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: VTRLWPQGRMASFYKSDVLSPLQ*SLQGLQ
Trigger: CTGAAGCCCTTGTAGACTTCACTGGAGGGGTGACAA...TACATCAGATTTGTAAAAGCTAGCCATCCTTCCCTGAGGCCACAACCTTGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR TCA 90 bp TGGAAAAAGGCCATTGTTCTGGTTTTGCACCTGTATTCTTGGTTGAGAGGGATGTGTAGGTGGCTTCGATaGGGATGTCCCAGAGGTTGC +
Preference number: 4 (lower is better)
Translates to: WKKAIVLVLHLYSWLRGMCRWLR*GCPRGC
Trigger: GCAACCTCTGGGACATCCTCATCGAAGCCACCTACA...CATCCCTCTCAACCAAGAATACAGGTGCAAAACCAGAACAATGGCCTTTTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR TCA 90 bp TGGAAAAAGGCCATTGTTCTGGTTTTGCACCTGTATTCTTGGTTGAGAGGGATGCGGATGAGCATCAGCTaGCAGACGTCATCACTGAGC +
Preference number: 4 (lower is better)
Translates to: WKKAIVLVLHLYSWLRGMRMSIS*QTSSLS
Trigger: GCTCAGTGATGACGTCTGTCAGCTGATGCTCATCCG...CATCCCTCTCAACCAAGAATACAGGTGCAAAACCAGAACAATGGCCTTTTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR TCA 90 bp ACCTTCCCAGCTGAGAAGGTGACGGCTAGTGAGGCTGTCCTGAAGATCAGTAAGACCTTAAAACCTAGATaGTTACCCCACCATGTGAGA +
Preference number: 4 (lower is better)
Translates to: TFPAEKVTASEAVLKISKTLKPR*LPHHVR
Trigger: TCTCACATGGTGGGGTAATCATCTAGGTTTTAAGGT...CTTACTGATCTTCAGGACAGCCTCACTAGCCGTCACCTTCTCAGCTGGGAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR TCA 90 bp CATAAGCTACGCTTTCAAAGTGCTCCTTTCTTCTGGTACAGTACCCATCTGACAAGCCCACTATATCCCTaGCCCCATCCCCAAACAGCT +
Preference number: 4 (lower is better)
Translates to: HKLRFQSAPFFWYSTHLTSPLYP*PHPQTA
Trigger: AGCTGTTTGGGGATGGGGTCAGGGATATAGTGGGCT...TGTCAGATGGGTACTGTACCAGAAGAAAGGAGCACTTTGAAAGCGTAGCTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR TCA 90 bp CTACCCCATAAGCTACGCTTTCAAAGTGCTCCTTTCTTCTGGTACAGTACCCATAAGAAGACTACCCCATaGCCTCAGATGCCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: LPHKLRFQSAPFFWYSTHKKTTP*PQMPEP
Trigger: TGGCTCTGGCATCTGAGGTCATGGGGTAGTCTTCTT...ATGGGTACTGTACCAGAAGAAAGGAGCACTTTGAAAGCGTAGCTTATGGGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR GCA 90 bp GACCCCATCCCCAAACAGCTGAAACTTAGCCTATGTCTCTATCAATTTGCAGATAAGTCCTGTTGGGGTTaGTGTGGAGACGCCCTCCTA +
Preference number: 4 (lower is better)
Translates to: DPIPKQLKLSLCLYQFADKSCWG*CGDALL
Trigger: TAGGAGGGCGTCTCCACAGCAACCCCAACAGGACTT...ATCTGCAAATTGATAGAGACATAGGCTAAGTTTCAGCTGTTTGGGGATGGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR GCA 90 bp CATAAGCTACGCTTTCAAAGTGCTCCTTTCTTCTGGTACAGTACCCATCTGACAAAGTCCTGTTGGGGTTaGTGTGGAGACGCCCTCCTA +
Preference number: 4 (lower is better)
Translates to: HKLRFQSAPFFWYSTHLTKSCWG*CGDALL
Trigger: TAGGAGGGCGTCTCCACAGCAACCCCAACAGGACTT...TGTCAGATGGGTACTGTACCAGAAGAAAGGAGCACTTTGAAAGCGTAGCTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR GCA 90 bp GACCAGAAGTGTTTCAGATTTCAGGATATCTGCATTATAGACTTGTCAGTTGAAGCAGCAGGGAGCCACTaGCGATGGAGCTCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: DQKCFRFQDICIIDLSVEAAGSH*RWSSGW
Trigger: CCACCCTGAGCTCCATCGGCAGTGGCTCCCTGCTGC...TTCAACTGACAAGTCTATAATGCAGATATCCTGAAATCTGAAACACTTCTGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR GCA 90 bp CATTGTTCTGGTTTTGCACCTGTATTCTTGGTTGAGAGGGATGACATAAACAAGGTGTCCTGCAGCAACTaGCTCTGGCCACCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: HCSGFAPVFLVERDDINKVSCSN*LWPPAV
Trigger: CACAGCTGGTGGCCAGAGGCAGTTGCTGCAGGACAC...CTTGTTTATGTCATCCCTCTCAACCAAGAATACAGGTGCAAAACCAGAACAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR GCA 90 bp CATTGTTCTGGTTTTGCACCTGTATTCTTGGTTGAGAGGGATGACATAAACAAGTCCCTCATGGCAGCGTaGAGCTGCTCCCAGTTCAGG +
Preference number: 4 (lower is better)
Translates to: HCSGFAPVFLVERDDINKSLMAA*SCSQFR
Trigger: CCTGAACTGGGAGCAGCTGCACGCTGCCATGAGGGA...CTTGTTTATGTCATCCCTCTCAACCAAGAATACAGGTGCAAAACCAGAACAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR GCA 90 bp GTTGTATGGAGGCTAACCACACCAGCTCTGGAGTCAGAATGCTTAGGCCATGTCGCTACGCTTTCAAAGTaGTCCTTTCTTCTGGTACAG +
Preference number: 4 (lower is better)
Translates to: VVWRLTTPALESECLGHVATLSK*SFLLVQ
Trigger: CTGTACCAGAAGAAAGGAGCACTTTGAAAGCGTAGC...GACATGGCCTAAGCATTCTGACTCCAGAGCTGGTGTGGTTAGCCTCCATACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp ATGGACACACTTTTATCTCTTCATTCAGCTTCCTTCCTGAGTCTGCTATGGAGTGTGGCCACAGAGACATaGCAGGTGGTGGGTACAGTC +
Preference number: 4 (lower is better)
Translates to: MDTLLSLHSASFLSLLWSVATET*QVVGTV
Trigger: GACTGTACCCACCACCTGCCATGTCTCTGTGGCCAC...ACTCCATAGCAGACTCAGGAAGGAAGCTGAATGAAGAGATAAAAGTGTGTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp GACCCCATCCCCAAACAGCTGAAACTTAGCCTATGTCTCTATCAATTTGCAGATCTGTTGGGGTTGCTGTaGAGACGCCCTCCTAGAGTA +
Preference number: 4 (lower is better)
Translates to: DPIPKQLKLSLCLYQFADLLGLL*RRPPRV
Trigger: TACTCTAGGAGGGCGTCTCCACAGCAACCCCAACAG...ATCTGCAAATTGATAGAGACATAGGCTAAGTTTCAGCTGTTTGGGGATGGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp AGGTTGTGGCCTCAGGGAAGGATGGCTAGCTTTTACAAATCTGATGTAATCTTTTCCCCTGAGTGGGTCTaGCAGCCAATGAGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: RLWPQGRMASFYKSDVIFSPEWV*QPMRVL
Trigger: CAGAACCCTCATTGGCTGCCAGACCCACTCAGGGGA...AAAGATTACATCAGATTTGTAAAAGCTAGCCATCCTTCCCTGAGGCCACAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp TGTTCTGGTTTTGCACCTGTATTCTTGGTTGAGAGGGATGACATAAACAAGGTGATCTCCCCTCCCGCATaGTGTACGTCCACTTCTGGG +
Preference number: 4 (lower is better)
Translates to: CSGFAPVFLVERDDINKVISPPA*CTSTSG
Trigger: CCCAGAAGTGGACGTACACCATGCGGGAGGGGAGAT...CACCTTGTTTATGTCATCCCTCTCAACCAAGAATACAGGTGCAAAACCAGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp GTTTTGGAAGACATCCTCCATGTTCTCTACACGCAGCATCAAGTGGATGAAACTACAGGTAGAAGCCAATaGCGAGGAGAGGCTTCCGCT +
Preference number: 4 (lower is better)
Translates to: VLEDILHVLYTQHQVDETTGRSQ*RGEASA
Trigger: AGCGGAAGCCTCTCCTCGCCATTGGCTTCTACCTGT...AGTTTCATCCACTTGATGCTGCGTGTAGAGAACATGGAGGATGTCTTCCAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR CCA 90 bp CTACCCCATAAGCTACGCTTTCAAAGTGCTCCTTTCTTCTGGTACAGTACCCATCTTGTGACAAGGTTGTaGCCTCAGGGAAGGATGGCT +
Preference number: 4 (lower is better)
Translates to: LPHKLRFQSAPFFWYSTHLVTRL*PQGRMA
Trigger: AGCCATCCTTCCCTGAGGCCACAACCTTGTCACAAG...ATGGGTACTGTACCAGAAGAAAGGAGCACTTTGAAAGCGTAGCTTATGGGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp ACCTTCCCAGCTGAGAAGGTGACGGCTAGTGAGGCTGTCCTGAAGATCAGTAAGTTCCTGAGTCTGCTATaGAGTTGGAAATCAAACAGC +
Preference number: 4 (lower is better)
Translates to: TFPAEKVTASEAVLKISKFLSLL*SWKSNS
Trigger: GCTGTTTGATTTCCAACTCCATAGCAGACTCAGGAA...CTTACTGATCTTCAGGACAGCCTCACTAGCCGTCACCTTCTCAGCTGGGAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
3UTR CAA 72 bp CCGTCATTGTCTTTCCTCAGAAGCAGAATCTTCTCCTaGGGGCTCAGCAGCTCCCATTTACTTGAACTGTCA +
Preference number: 4 (lower is better)
Translates to: PSLSFLRSRIFS*GLSSSHLLELS
Trigger: TGACAGTTCAAGTAAATGGGAGCTGCTGAGCCCCAAGGAGAAGATTCTGCTTCTGAGGAAAGACAATGACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
3UTR CAA 72 bp CTACTAGGTTGCCCCAGATCCAATCATACGGAGATATaGTCAGAAGAAGACTACCCCATGACCTCAGATGCC +
Preference number: 4 (lower is better)
Translates to: LLGCPRSNHTEI*SEEDYPMTSDA
Trigger: GGCATCTGAGGTCATGGGGTAGTCTTCTTCTGACAATATCTCCGTATGATTGGATCTGGGGCAACCTAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR TCA 90 bp ATGGACACACTTTTATCTCTTCATTCAGCTTCCTTCCTGAGTCTGCTATGGAGTCCCAAGCGAGGCTGTTaGGTGGGATGGTGCAATCAA +
Preference number: 4 (lower is better)
Translates to: MDTLLSLHSASFLSLLWSPKRGC*VGWCNQ
Trigger: TTGATTGCACCATCCCACTCAACAGCCTCGCTTGGG...ACTCCATAGCAGACTCAGGAAGGAAGCTGAATGAAGAGATAAAAGTGTGTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR TCA 90 bp ACAGGTGCTCAAATCTCCTTTAGTCCTCTGCCAATGGACACACTTTTATCTCTTTCCAGTGAGTCTTCCTaGGGAGTCTCTGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: TGAQISFSPLPMDTLLSLSSESS*GVSAAQ
Trigger: CTGAGCAGCAGAGACTCCTCAGGAAGACTCACTGGA...AAGAGATAAAAGTGTGTCCATTGGCAGAGGACTAAAGGAGATTTGAGCACCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR TCA 90 bp ACAGGTGCTCAAATCTCCTTTAGTCCTCTGCCAATGGACACACTTTTATCTCTTTGTAGGTGGCTTCGATaGGGATGTCCCAGAGGTTGC +
Preference number: 4 (lower is better)
Translates to: TGAQISFSPLPMDTLLSLCRWLR*GCPRGC
Trigger: GCAACCTCTGGGACATCCTCATCGAAGCCACCTACA...AAGAGATAAAAGTGTGTCCATTGGCAGAGGACTAAAGGAGATTTGAGCACCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR TCA 90 bp TACCCCATAAGCTACGCTTTCAAAGTGCTCCTTTCTTCTGGTACAGTACCCATCCAGCTCCCATTTACTTaGACTGTCACTCCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: YPISYAFKVLLSSGTVPIQLPFT*TVTPVS
Trigger: GGAGACTGGAGTGACAGTTCAAGTAAATGGGAGCTG...GATGGGTACTGTACCAGAAGAAAGGAGCACTTTGAAAGCGTAGCTTATGGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR TCA 90 bp ACAGGTGCTCAAATCTCCTTTAGTCCTCTGCCAATGGACACACTTTTATCTCTTATATGCAGGGCACGATaGGGTACGTCCCTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: TGAQISFSPLPMDTLLSLICRAR*GTSLVP
Trigger: TGGAACCAGGGACGTACCTCATCGTGCCCTGCATAT...AAGAGATAAAAGTGTGTCCATTGGCAGAGGACTAAAGGAGATTTGAGCACCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR TCA 90 bp GCTCAAATCTCCTTTAGTCCTCTGCCAATGGACACACTTTTATCTCTTCATTCACCTGAGGACGAACTCTaGCTTCTGGTGGGCCTCCAA +
Preference number: 4 (lower is better)
Translates to: AQISFSPLPMDTLLSLHSPEDEL*LLVGLQ
Trigger: TTGGAGGCCCACCAGAAGTCAGAGTTCGTCCTCAGG...TGAATGAAGAGATAAAAGTGTGTCCATTGGCAGAGGACTAAAGGAGATTTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR TCA 90 bp TACCCCATAAGCTACGCTTTCAAAGTGCTCCTTTCTTCTGGTACAGTACCCATCCTAGTGAGGCTGTCCTaGAGATCAGTAAGTAGGGTG +
Preference number: 4 (lower is better)
Translates to: YPISYAFKVLLSSGTVPILVRLS*RSVSRV
Trigger: CACCCTACTTACTGATCTTCAGGACAGCCTCACTAG...GATGGGTACTGTACCAGAAGAAAGGAGCACTTTGAAAGCGTAGCTTATGGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR GCA 90 bp ATGGACACACTTTTATCTCTTCATTCAGCTTCCTTCCTGAGTCTGCTATGGAGTATGCTCAGGAACTGGTaGTGGTCCTGGGGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: MDTLLSLHSASFLSLLWSMLRNW*WSWGPS
Trigger: TGAAGGACCCCAGGACCAGCACCAGTTCCTGAGCAT...ACTCCATAGCAGACTCAGGAAGGAAGCTGAATGAAGAGATAAAAGTGTGTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR GCA 90 bp TTTACAGATAACCAGGAGCACGAAATGTGTTTTAAAGTCCTGCAGCGTCATCCATCAGCCCGGGAAAGATaGTCAGGAACTGGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: FTDNQEHEMCFKVLQRHPSARER*SGTGAG
Trigger: ACCAGCACCAGTTCCTGAGCATCTTTCCCGGGCTGA...TGGATGACGCTGCAGGACTTTAAAACACATTTCGTGCTCCTGGTTATCTGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR GCA 90 bp GACCCCATCCCCAAACAGCTGAAACTTAGCCTATGTCTCTATCAATTTGCAGATTGCAAGGCCAGAGCTTaGAAAGCAGCCAAGAACCAG +
Preference number: 4 (lower is better)
Translates to: DPIPKQLKLSLCLYQFADCKARA*KAAKNQ
Trigger: CTGGTTCTTGGCTGCTTTGCAAGCTCTGGCCTTGCA...ATCTGCAAATTGATAGAGACATAGGCTAAGTTTCAGCTGTTTGGGGATGGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR GCA 90 bp GACCCCATCCCCAAACAGCTGAAACTTAGCCTATGTCTCTATCAATTTGCAGATCTCAGGATGTCCTGGTaGAAGGCCAGAGCTTGCAAA +
Preference number: 4 (lower is better)
Translates to: DPIPKQLKLSLCLYQFADLRMSW*KARACK
Trigger: TTTGCAAGCTCTGGCCTTGCACCAGGACATCCTGAG...ATCTGCAAATTGATAGAGACATAGGCTAAGTTTCAGCTGTTTGGGGATGGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR GCA 90 bp GCCAGGTTGATGGTCATTGTCACCCCTCCAGTGAAGTCTACAAGGGCTTCAGACTGTGTTTTAAAGTCCTaGAGCGTCATCCAGAATTCT +
Preference number: 4 (lower is better)
Translates to: ARLMVIVTPPVKSTRASDCVLKS*SVIQNS
Trigger: AGAATTCTGGATGACGCTGCAGGACTTTAAAACACA...GTCTGAAGCCCTTGTAGACTTCACTGGAGGGGTGACAATGACCATCAACCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR GCA 90 bp AGGTTGTGGCCTCAGGGAAGGATGGCTAGCTTTTACAAATCTGATGTAATCTTTATGCACGGGGAGGGCTaGAGAAGAGAAACCTTCCCA +
Preference number: 4 (lower is better)
Translates to: RLWPQGRMASFYKSDVIFMHGEG*RRETFP
Trigger: TGGGAAGGTTTCTCTTCTGCAGCCCTCCCCGTGCAT...AAAGATTACATCAGATTTGTAAAAGCTAGCCATCCTTCCCTGAGGCCACAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp GACCCCATCCCCAAACAGCTGAAACTTAGCCTATGTCTCTATCAATTTGCAGATAACTGGTGCTGGTCCTaGGGTCCTTCAGCATGGATT +
Preference number: 4 (lower is better)
Translates to: DPIPKQLKLSLCLYQFADNWCWS*GPSAWI
Trigger: AATCCATGCTGAAGGACCCCAGGACCAGCACCAGTT...ATCTGCAAATTGATAGAGACATAGGCTAAGTTTCAGCTGTTTGGGGATGGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR CCA 90 bp GTGACAAGGTTGTGGCCTCAGGGAAGGATGGCTAGCTTTTACAAATCTGATGTATCTCCTACTATCCCCTaGCACAGATCCAGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: VTRLWPQGRMASFYKSDVSPTIP*HRSSLL
Trigger: CAAAAGGCTGGATCTGTGCCAGGGGATAGTAGGAGA...TACATCAGATTTGTAAAAGCTAGCCATCCTTCCCTGAGGCCACAACCTTGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp AGGTTGTGGCCTCAGGGAAGGATGGCTAGCTTTTACAAATCTGATGTAATCTTTTCCCAGAGGTTGCCATaGGCTTCTGCCAGGTTGATG +
Preference number: 4 (lower is better)
Translates to: RLWPQGRMASFYKSDVIFSQRLP*ASARLM
Trigger: CATCAACCTGGCAGAAGCCCATGGCAACCTCTGGGA...AAAGATTACATCAGATTTGTAAAAGCTAGCCATCCTTCCCTGAGGCCACAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp AGGTTGTGGCCTCAGGGAAGGATGGCTAGCTTTTACAAATCTGATGTAATCTTTACAGGTAGAAGCCAATaGCGAGGAGAGGCTTCCGCT +
Preference number: 4 (lower is better)
Translates to: RLWPQGRMASFYKSDVIFTGRSQ*RGEASA
Trigger: AGCGGAAGCCTCTCCTCGCCATTGGCTTCTACCTGT...AAAGATTACATCAGATTTGTAAAAGCTAGCCATCCTTCCCTGAGGCCACAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp ACAGGTGCTCAAATCTCCTTTAGTCCTCTGCCAATGGACACACTTTTATCTCTTGATGAGGTACGTCCCTaGTTCCAGACACAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: TGAQISFSPLPMDTLLSLDEVRP*FQTQLL
Trigger: CAGGAGCTGTGTCTGGAACCAGGGACGTACCTCATC...AAGAGATAAAAGTGTGTCCATTGGCAGAGGACTAAAGGAGATTTGAGCACCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR TCA 90 bp TACCCCATAAGCTACGCTTTCAAAGTGCTCCTTTCTTCTGGTACAGTACCCATCTTCAGACACCTGTCCTaGCTGCAAGTCTTCATAGGA +
Preference number: 4 (lower is better)
Translates to: YPISYAFKVLLSSGTVPIFRHLS*LQVFIG
Trigger: TCCTATGAAGACTTGCAGTCAGGACAGGTGTCTGAA...GATGGGTACTGTACCAGAAGAAAGGAGCACTTTGAAAGCGTAGCTTATGGGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR TCA 90 bp ACAGGTGCTCAAATCTCCTTTAGTCCTCTGCCAATGGACACACTTTTATCTCTTTTGTCACCCCTCCAGTaGAGTCTACAAGGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: TGAQISFSPLPMDTLLSLLSPLQ*SLQGLQ
Trigger: CTGAAGCCCTTGTAGACTTCACTGGAGGGGTGACAA...AAGAGATAAAAGTGTGTCCATTGGCAGAGGACTAAAGGAGATTTGAGCACCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR TCA 90 bp CATTGTTCTGGTTTTGCACCTGTATTCTTGGTTGAGAGGGATGACATAAACAAGTCTGCTCCCCAGACTTaGCCAGGTCATCTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: HCSGFAPVFLVERDDINKSAPQT*PGHLVQ
Trigger: CTGAACCAGATGACCTGGTCAAGTCTGGGGAGCAGA...CTTGTTTATGTCATCCCTCTCAACCAAGAATACAGGTGCAAAACCAGAACAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR TCA 90 bp CATTGTTCTGGTTTTGCACCTGTATTCTTGGTTGAGAGGGATGACATAAACAAGCGGATGAGCATCAGCTaGCAGACGTCATCACTGAGC +
Preference number: 4 (lower is better)
Translates to: HCSGFAPVFLVERDDINKRMSIS*QTSSLS
Trigger: GCTCAGTGATGACGTCTGTCAGCTGATGCTCATCCG...CTTGTTTATGTCATCCCTCTCAACCAAGAATACAGGTGCAAAACCAGAACAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR TCA 90 bp CTACCCCATAAGCTACGCTTTCAAAGTGCTCCTTTCTTCTGGTACAGTACCCATGATTACCCCACCATGTaGGAACATGTGGCATGTCTA +
Preference number: 4 (lower is better)
Translates to: LPHKLRFQSAPFFWYSTHDYPTM*EHVACL
Trigger: TAGACATGCCACATGTTCTCACATGGTGGGGTAATC...ATGGGTACTGTACCAGAAGAAAGGAGCACTTTGAAAGCGTAGCTTATGGGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR TCA 90 bp AGGTTGTGGCCTCAGGGAAGGATGGCTAGCTTTTACAAATCTGATGTAATCTTTAAGAAGACTACCCCATaGCCTCAGATGCCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: RLWPQGRMASFYKSDVIFKKTTP*PQMPEP
Trigger: TGGCTCTGGCATCTGAGGTCATGGGGTAGTCTTCTT...AAAGATTACATCAGATTTGTAAAAGCTAGCCATCCTTCCCTGAGGCCACAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR GCA 90 bp GCATTAAGGTCCAGTAAGGCCAGGATCCCCTGGCAGGCTTCCAGGCTAAAGAAGGCATTAATCTCTGGATaGTTTTCAAAGAATTTGGTG +
Preference number: 4 (lower is better)
Translates to: ALRSSKARIPWQASRLKKALISG*FSKNLV
Trigger: CACCAAATTCTTTGAAAAGCATCCAGAGATTAATGC...CTTCTTTAGCCTGGAAGCCTGCCAGGGGATCCTGGCCTTACTGGACCTTAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR CCA 90 bp AGGTTGTGGCCTCAGGGAAGGATGGCTAGCTTTTACAAATCTGATGTAATCTTTGCAGAATCTTCTCCTTaGGGCTCAGCAGCTCCCATT +
Preference number: 4 (lower is better)
Translates to: RLWPQGRMASFYKSDVIFAESSP*GSAAPI
Trigger: AATGGGAGCTGCTGAGCCCCAAGGAGAAGATTCTGC...AAAGATTACATCAGATTTGTAAAAGCTAGCCATCCTTCCCTGAGGCCACAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp TTTACAGATAACCAGGAGCACGAAATGTGTTTTAAAGTCCTGCAGCGTCATCCAAACTCTGACTTCTGGTaGGCCTCCAATATGCAGGGC +
Preference number: 4 (lower is better)
Translates to: FTDNQEHEMCFKVLQRHPNSDFW*ASNMQG
Trigger: GCCCTGCATATTGGAGGCCCACCAGAAGTCAGAGTT...TGGATGACGCTGCAGGACTTTAAAACACATTTCGTGCTCCTGGTTATCTGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR CCA 90 bp TGTTCTGGTTTTGCACCTGTATTCTTGGTTGAGAGGGATGACATAAACAAGGTGAACTCTGACTTCTGGTaGGCCTCCAATATGCAGGGC +
Preference number: 4 (lower is better)
Translates to: CSGFAPVFLVERDDINKVNSDFW*ASNMQG
Trigger: GCCCTGCATATTGGAGGCCCACCAGAAGTCAGAGTT...CACCTTGTTTATGTCATCCCTCTCAACCAAGAATACAGGTGCAAAACCAGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp GTGACAAGGTTGTGGCCTCAGGGAAGGATGGCTAGCTTTTACAAATCTGATGTAGGCCTCAGGGAAGGATaGCTAGCTTTTACAAATCTG +
Preference number: 4 (lower is better)
Translates to: VTRLWPQGRMASFYKSDVGLREG*LAFTNL
Trigger: CAGATTTGTAAAAGCTAGCCATCCTTCCCTGAGGCC...TACATCAGATTTGTAAAAGCTAGCCATCCTTCCCTGAGGCCACAACCTTGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp CATTGTTCTGGTTTTGCACCTGTATTCTTGGTTGAGAGGGATGACATAAACAAGCCAGCCCACCCCACCTaGACTCTGCCAATTCTCTTA +
Preference number: 4 (lower is better)
Translates to: HCSGFAPVFLVERDDINKPAHPT*TLPILL
Trigger: TAAGAGAATTGGCAGAGTCCAGGTGGGGTGGGCTGG...CTTGTTTATGTCATCCCTCTCAACCAAGAATACAGGTGCAAAACCAGAACAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp GTTGTATGGAGGCTAACCACACCAGCTCTGGAGTCAGAATGCTTAGGCCATGTCAGTCTGCTATGGAGTTaGAAATCAAACAGCCATGTT +
Preference number: 4 (lower is better)
Translates to: VVWRLTTPALESECLGHVSLLWS*KSNSHV
Trigger: AACATGGCTGTTTGATTTCCAACTCCATAGCAGACT...GACATGGCCTAAGCATTCTGACTCCAGAGCTGGTGTGGTTAGCCTCCATACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR TCA 90 bp ACAGGTGCTCAAATCTCCTTTAGTCCTCTGCCAATGGACACACTTTTATCTCTTTTCTCAGTGAAACTCTaGTTCAGGGGAACAACCCGG +
Preference number: 4 (lower is better)
Translates to: TGAQISFSPLPMDTLLSLFSVKL*FRGTTR
Trigger: CCGGGTTGTTCCCCTGAATCAGAGTTTCACTGAGAA...AAGAGATAAAAGTGTGTCCATTGGCAGAGGACTAAAGGAGATTTGAGCACCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR TCA 90 bp GACCAGAAGTGTTTCAGATTTCAGGATATCTGCATTATAGACTTGTCAGTTGAAGGGTCTGGCAGCCAATaGGGGTTCTGTTGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: DQKCFRFQDICIIDLSVEGSGSQ*GFCCRW
Trigger: CCACCTACAACAGAACCCTCATTGGCTGCCAGACCC...TTCAACTGACAAGTCTATAATGCAGATATCCTGAAATCTGAAACACTTCTGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR TCA 90 bp TGGAAAAAGGCCATTGTTCTGGTTTTGCACCTGTATTCTTGGTTGAGAGGGATGTCACTTCTTTCTCCTTaGGAAACCTATCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: WKKAIVLVLHLYSWLRGMSLLSP*ETYQAG
Trigger: GCCAGCCTGATAGGTTTCTCAAGGAGAAAGAAGTGA...CATCCCTCTCAACCAAGAATACAGGTGCAAAACCAGAACAATGGCCTTTTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR TCA 90 bp AGGTTGTGGCCTCAGGGAAGGATGGCTAGCTTTTACAAATCTGATGTAATCTTTGGTACAGTACCCATCTaGCAGGTGCTCAAATCTCCT +
Preference number: 4 (lower is better)
Translates to: RLWPQGRMASFYKSDVIFGTVPI*QVLKSP
Trigger: AGGAGATTTGAGCACCTGTCAGATGGGTACTGTACC...AAAGATTACATCAGATTTGTAAAAGCTAGCCATCCTTCCCTGAGGCCACAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR GCA 90 bp ATGGACACACTTTTATCTCTTCATTCAGCTTCCTTCCTGAGTCTGCTATGGAGTCTGAGGAGTCTCTGCTaGTCCTGCACAGGAGATTTT +
Preference number: 4 (lower is better)
Translates to: MDTLLSLHSASFLSLLWSLRSLC*SCTGDF
Trigger: AAAATCTCCTGTGCAGGAGCAGCAGAGACTCCTCAG...ACTCCATAGCAGACTCAGGAAGGAAGCTGAATGAAGAGATAAAAGTGTGTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403897.4
CDS-3UTR CCA 90 bp GCTCAAATCTCCTTTAGTCCTCTGCCAATGGACACACTTTTATCTCTTCATTCAGCAGAATCTTCTCCTTaGGGCTCAGCAGCTCCCATT +
Preference number: 4 (lower is better)
Translates to: AQISFSPLPMDTLLSLHSAESSP*GSAAPI
Trigger: AATGGGAGCTGCTGAGCCCCAAGGAGAAGATTCTGC...TGAATGAAGAGATAAAAGTGTGTCCATTGGCAGAGGACTAAAGGAGATTTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp GACCCCATCCCCAAACAGCTGAAACTTAGCCTATGTCTCTATCAATTTGCAGATAGAAACCTATCAGGCTaGCTCAGAGGAGTGTTTCTC +
Preference number: 4 (lower is better)
Translates to: DPIPKQLKLSLCLYQFADRNLSG*LRGVFL
Trigger: GAGAAACACTCCTCTGAGCCAGCCTGATAGGTTTCT...ATCTGCAAATTGATAGAGACATAGGCTAAGTTTCAGCTGTTTGGGGATGGGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp TTTACAGATAACCAGGAGCACGAAATGTGTTTTAAAGTCCTGCAGCGTCATCCAACGAACTCTGACTTCTaGTGGGCCTCCAATATGCAG +
Preference number: 4 (lower is better)
Translates to: FTDNQEHEMCFKVLQRHPTNSDF*WASNMQ
Trigger: CTGCATATTGGAGGCCCACCAGAAGTCAGAGTTCGT...TGGATGACGCTGCAGGACTTTAAAACACATTTCGTGCTCCTGGTTATCTGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR CCA 90 bp GTTTTGGAAGACATCCTCCATGTTCTCTACACGCAGCATCAAGTGGATGAAACTATCCACTCTGGCTTCTaGAGGTATATCCCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: VLEDILHVLYTQHQVDETIHSGF*RYIPLP
Trigger: TGGCAAAGGGATATACCTCCAGAAGCCAGAGTGGAT...AGTTTCATCCACTTGATGCTGCGTGTAGAGAACATGGAGGATGTCTTCCAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR CCA 90 bp CATTGTTCTGGTTTTGCACCTGTATTCTTGGTTGAGAGGGATGACATAAACAAGCTTGTGACAAGGTTGTaGCCTCAGGGAAGGATGGCT +
Preference number: 4 (lower is better)
Translates to: HCSGFAPVFLVERDDINKLVTRL*PQGRMA
Trigger: AGCCATCCTTCCCTGAGGCCACAACCTTGTCACAAG...CTTGTTTATGTCATCCCTCTCAACCAAGAATACAGGTGCAAAACCAGAACAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR TCA 90 bp TTTACAGATAACCAGGAGCACGAAATGTGTTTTAAAGTCCTGCAGCGTCATCCAGTTTTCCTAGGGAATTaGCCTCAGCAACTGAAGGAG +
Preference number: 4 (lower is better)
Translates to: FTDNQEHEMCFKVLQRHPVFLGN*PQQLKE
Trigger: CTCCTTCAGTTGCTGAGGTCAATTCCCTAGGAAAAC...TGGATGACGCTGCAGGACTTTAAAACACATTTCGTGCTCCTGGTTATCTGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR TCA 90 bp TGTTCTGGTTTTGCACCTGTATTCTTGGTTGAGAGGGATGACATAAACAAGGTGAGGGGTTCCGTAGCTTaGCGAGATATTCAGGTCTAT +
Preference number: 4 (lower is better)
Translates to: CSGFAPVFLVERDDINKVRGSVA*RDIQVY
Trigger: ATAGACCTGAATATCTCGTCAAGCTACGGAACCCCT...CACCTTGTTTATGTCATCCCTCTCAACCAAGAATACAGGTGCAAAACCAGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR TCA 90 bp AGGTTGTGGCCTCAGGGAAGGATGGCTAGCTTTTACAAATCTGATGTAATCTTTTCACTTCTTTCTCCTTaGGAAACCTATCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: RLWPQGRMASFYKSDVIFSLLSP*ETYQAG
Trigger: GCCAGCCTGATAGGTTTCTCAAGGAGAAAGAAGTGA...AAAGATTACATCAGATTTGTAAAAGCTAGCCATCCTTCCCTGAGGCCACAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR TCA 90 bp ATGGACACACTTTTATCTCTTCATTCAGCTTCCTTCCTGAGTCTGCTATGGAGTATGTCTAAAGTCACTTaGGTTTGCAGCCACAGAGGC +
Preference number: 4 (lower is better)
Translates to: MDTLLSLHSASFLSLLWSMSKVT*VCSHRG
Trigger: GCCTCTGTGGCTGCAAACTCAAGTGACTTTAGACAT...ACTCCATAGCAGACTCAGGAAGGAAGCTGAATGAAGAGATAAAAGTGTGTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR TCA 90 bp TACCCCATAAGCTACGCTTTCAAAGTGCTCCTTTCTTCTGGTACAGTACCCATCACCTTAAAACCTAGATaGTTACCCCACCATGTGAGA +
Preference number: 4 (lower is better)
Translates to: YPISYAFKVLLSSGTVPITLKPR*LPHHVR
Trigger: TCTCACATGGTGGGGTAATCATCTAGGTTTTAAGGT...GATGGGTACTGTACCAGAAGAAAGGAGCACTTTGAAAGCGTAGCTTATGGGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR TCA 90 bp GACCAGAAGTGTTTCAGATTTCAGGATATCTGCATTATAGACTTGTCAGTTGAAAGCCCACTATATCCCTaGCCCCATCCCCAAACAGCT +
Preference number: 4 (lower is better)
Translates to: DQKCFRFQDICIIDLSVESPLYP*PHPQTA
Trigger: AGCTGTTTGGGGATGGGGTCAGGGATATAGTGGGCT...TTCAACTGACAAGTCTATAATGCAGATATCCTGAAATCTGAAACACTTCTGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR TCA 90 bp GTGACAAGGTTGTGGCCTCAGGGAAGGATGGCTAGCTTTTACAAATCTGATGTAAAGCAGGAAGCCCTTTaGGAACTCAGGTGTTTTAAA +
Preference number: 4 (lower is better)
Translates to: VTRLWPQGRMASFYKSDVKQEAL*ELRCFK
Trigger: TTTAAAACACCTGAGTTCTCAAAGGGCTTCCTGCTT...TACATCAGATTTGTAAAAGCTAGCCATCCTTCCCTGAGGCCACAACCTTGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR TCA 90 bp GTGACAAGGTTGTGGCCTCAGGGAAGGATGGCTAGCTTTTACAAATCTGATGTACAACCACCCACTGATTaGCTCTATAATTTAGCATGG +
Preference number: 4 (lower is better)
Translates to: VTRLWPQGRMASFYKSDVQPPTD*LYNLAW
Trigger: CCATGCTAAATTATAGAGTCAATCAGTGGGTGGTTG...TACATCAGATTTGTAAAAGCTAGCCATCCTTCCCTGAGGCCACAACCTTGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR TCA 90 bp CATTGTTCTGGTTTTGCACCTGTATTCTTGGTTGAGAGGGATGACATAAACAAGGGTACAGTACCCATCTaGCAGGTGCTCAAATCTCCT +
Preference number: 4 (lower is better)
Translates to: HCSGFAPVFLVERDDINKGTVPI*QVLKSP
Trigger: AGGAGATTTGAGCACCTGTCAGATGGGTACTGTACC...CTTGTTTATGTCATCCCTCTCAACCAAGAATACAGGTGCAAAACCAGAACAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR GCA 90 bp ACAGGTGCTCAAATCTCCTTTAGTCCTCTGCCAATGGACACACTTTTATCTCTTACAGACAGCAGGAACTaGGGGTTCTTCCAAAATGTG +
Preference number: 4 (lower is better)
Translates to: TGAQISFSPLPMDTLLSLTDSRN*GFFQNV
Trigger: CACATTTTGGAAGAACCCGCAGTTCCTGCTGTCTGT...AAGAGATAAAAGTGTGTCCATTGGCAGAGGACTAAAGGAGATTTGAGCACCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp CAATTTGCAGATGCTGGGACTAAATGTCTAAGGATATATCATTCCCATTTCAGACCTCCTAGAGTACCTTaGCGCCAGCTTCCATCTGCA +
Preference number: 4 (lower is better)
Translates to: QFADAGTKCLRIYHSHFRPPRVP*RQLPSA
Trigger: TGCAGATGGAAGCTGGCGCCAAGGTACTCTAGGAGG...TCTGAAATGGGAATGATATATCCTTAGACATTTAGTCCCAGCATCTGCAAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp TACCCCATAAGCTACGCTTTCAAAGTGCTCCTTTCTTCTGGTACAGTACCCATCCTCCTCTGGTCATCATaGTACTTGTTCATCCTATAC +
Preference number: 4 (lower is better)
Translates to: YPISYAFKVLLSSGTVPILLWSS*YLFILY
Trigger: GTATAGGATGAACAAGTACCATGATGACCAGAGGAG...GATGGGTACTGTACCAGAAGAAAGGAGCACTTTGAAAGCGTAGCTTATGGGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp AGGTTGTGGCCTCAGGGAAGGATGGCTAGCTTTTACAAATCTGATGTAATCTTTAGAAACCTATCAGGCTaGCTCAGAGGAGTGTTTCTC +
Preference number: 4 (lower is better)
Translates to: RLWPQGRMASFYKSDVIFRNLSG*LRGVFL
Trigger: GAGAAACACTCCTCTGAGCCAGCCTGATAGGTTTCT...AAAGATTACATCAGATTTGTAAAAGCTAGCCATCCTTCCCTGAGGCCACAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp CATTGTTCTGGTTTTGCACCTGTATTCTTGGTTGAGAGGGATGACATAAACAAGAGAGGCAGTGTTGTATaGAGGCTAACCACACCAGCT +
Preference number: 4 (lower is better)
Translates to: HCSGFAPVFLVERDDINKRGSVV*RLTTPA
Trigger: AGCTGGTGTGGTTAGCCTCCATACAACACTGCCTCT...CTTGTTTATGTCATCCCTCTCAACCAAGAATACAGGTGCAAAACCAGAACAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR TCA 90 bp CAATTTGCAGATGCTGGGACTAAATGTCTAAGGATATATCATTCCCATTTCAGATCCTGGAGAAGACCCTaGGGACGAACTCTGACTTCT +
Preference number: 4 (lower is better)
Translates to: QFADAGTKCLRIYHSHFRSWRRP*GRTLTS
Trigger: AGAAGTCAGAGTTCGTCCTCAGGGTCTTCTCCAGGA...TCTGAAATGGGAATGATATATCCTTAGACATTTAGTCCCAGCATCTGCAAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR TCA 90 bp ATGGACACACTTTTATCTCTTCATTCAGCTTCCTTCCTGAGTCTGCTATGGAGTTACTGTCTGTGTTTCTaGAAGCCCACTATATCCCTG +
Preference number: 4 (lower is better)
Translates to: MDTLLSLHSASFLSLLWSYCLCF*KPTISL
Trigger: CAGGGATATAGTGGGCTTTCAGAAACACAGACAGTA...ACTCCATAGCAGACTCAGGAAGGAAGCTGAATGAAGAGATAAAAGTGTGTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR GCA 90 bp TACCCCATAAGCTACGCTTTCAAAGTGCTCCTTTCTTCTGGTACAGTACCCATCTTAAATCTACTAGGTTaGCCCAGATCCAATCATACG +
Preference number: 4 (lower is better)
Translates to: YPISYAFKVLLSSGTVPILNLLG*PRSNHT
Trigger: CGTATGATTGGATCTGGGGCAACCTAGTAGATTTAA...GATGGGTACTGTACCAGAAGAAAGGAGCACTTTGAAAGCGTAGCTTATGGGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp CTACCCCATAAGCTACGCTTTCAAAGTGCTCCTTTCTTCTGGTACAGTACCCATTCTTGGGTTAAGTTTTaGAAGACATCCTCCATGTTC +
Preference number: 4 (lower is better)
Translates to: LPHKLRFQSAPFFWYSTHSWVKF*KTSSMF
Trigger: GAACATGGAGGATGTCTTCCAAAACTTAACCCAAGA...ATGGGTACTGTACCAGAAGAAAGGAGCACTTTGAAAGCGTAGCTTATGGGGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp TACCCCATAAGCTACGCTTTCAAAGTGCTCCTTTCTTCTGGTACAGTACCCATCATCCCTTTGCCATCTTaGGTTAAGTTTTGGAAGACA +
Preference number: 4 (lower is better)
Translates to: YPISYAFKVLLSSGTVPIIPLPS*VKFWKT
Trigger: TGTCTTCCAAAACTTAACCCAAGATGGCAAAGGGAT...GATGGGTACTGTACCAGAAGAAAGGAGCACTTTGAAAGCGTAGCTTATGGGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp TGGAAAAAGGCCATTGTTCTGGTTTTGCACCTGTATTCTTGGTTGAGAGGGATGTTCCTGAGTCTGCTATaGAGTTGGAAATCAAACAGC +
Preference number: 4 (lower is better)
Translates to: WKKAIVLVLHLYSWLRGMFLSLL*SWKSNS
Trigger: GCTGTTTGATTTCCAACTCCATAGCAGACTCAGGAA...CATCCCTCTCAACCAAGAATACAGGTGCAAAACCAGAACAATGGCCTTTTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp CATTGTTCTGGTTTTGCACCTGTATTCTTGGTTGAGAGGGATGACATAAACAAGAGGAACCAGAGAGCTTaGCATAGGCCTTTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: HCSGFAPVFLVERDDINKRNQRA*HRPFPE
Trigger: TTCTGGAAAAGGCCTATGCCAAGCTCTCTGGTTCCT...CTTGTTTATGTCATCCCTCTCAACCAAGAATACAGGTGCAAAACCAGAACAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403897.4
CDS-3UTR TCA 90 bp GACCAGAAGTGTTTCAGATTTCAGGATATCTGCATTATAGACTTGTCAGTTGAACTAGTGAGGCTGTCCTaGAGATCAGTAAGTAGGGTG +
Preference number: 4 (lower is better)
Translates to: DQKCFRFQDICIIDLSVELVRLS*RSVSRV
Trigger: CACCCTACTTACTGATCTTCAGGACAGCCTCACTAG...TTCAACTGACAAGTCTATAATGCAGATATCCTGAAATCTGAAACACTTCTGGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR TCA 90 bp AGGTTGTGGCCTCAGGGAAGGATGGCTAGCTTTTACAAATCTGATGTAATCTTTCAACCACCCACTGATTaGCTCTATAATTTAGCATGG +
Preference number: 4 (lower is better)
Translates to: RLWPQGRMASFYKSDVIFQPPTD*LYNLAW
Trigger: CCATGCTAAATTATAGAGTCAATCAGTGGGTGGTTG...AAAGATTACATCAGATTTGTAAAAGCTAGCCATCCTTCCCTGAGGCCACAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR TCA 90 bp ACAGGTGCTCAAATCTCCTTTAGTCCTCTGCCAATGGACACACTTTTATCTCTTTGCCCCTATTTCCTTTaGGTTTCATGTCTACTCTCA +
Preference number: 4 (lower is better)
Translates to: TGAQISFSPLPMDTLLSLCPYFL*VSCLLS
Trigger: TGAGAGTAGACATGAAACTCAAAGGAAATAGGGGCA...AAGAGATAAAAGTGTGTCCATTGGCAGAGGACTAAAGGAGATTTGAGCACCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR GCA 90 bp CATAAGCTACGCTTTCAAAGTGCTCCTTTCTTCTGGTACAGTACCCATCTGACATGTGTTTTAAAGTCCTaGAGCGTCATCCAGAATTCT +
Preference number: 4 (lower is better)
Translates to: HKLRFQSAPFFWYSTHLTCVLKS*SVIQNS
Trigger: AGAATTCTGGATGACGCTGCAGGACTTTAAAACACA...TGTCAGATGGGTACTGTACCAGAAGAAAGGAGCACTTTGAAAGCGTAGCTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR GCA 90 bp CAATTTGCAGATGCTGGGACTAAATGTCTAAGGATATATCATTCCCATTTCAGATTCCAAAATGTGTCCTaGAGCAACTGCCTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: QFADAGTKCLRIYHSHFRFQNVS*SNCLWP
Trigger: TGGCCAGAGGCAGTTGCTGCAGGACACATTTTGGAA...TCTGAAATGGGAATGATATATCCTTAGACATTTAGTCCCAGCATCTGCAAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR GCA 90 bp GACCCCATCCCCAAACAGCTGAAACTTAGCCTATGTCTCTATCAATTTGCAGATGGAGGTATATCCCTTTaGCATCTTGGGTTAAGTTTT +
Preference number: 4 (lower is better)
Translates to: DPIPKQLKLSLCLYQFADGGISL*HLGLSF
Trigger: AAAACTTAACCCAAGATGGCAAAGGGATATACCTCC...ATCTGCAAATTGATAGAGACATAGGCTAAGTTTCAGCTGTTTGGGGATGGGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR GCA 90 bp CAATTTGCAGATGCTGGGACTAAATGTCTAAGGATATATCATTCCCATTTCAGAACCCCACCTGGACTCTaGCAATTCTCTTACTGTCTG +
Preference number: 4 (lower is better)
Translates to: QFADAGTKCLRIYHSHFRTPPGL*QFSYCL
Trigger: CAGACAGTAAGAGAATTGGCAGAGTCCAGGTGGGGT...TCTGAAATGGGAATGATATATCCTTAGACATTTAGTCCCAGCATCTGCAAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR GCA 90 bp CATTGTTCTGGTTTTGCACCTGTATTCTTGGTTGAGAGGGATGACATAAACAAGGCTACGCTTTCAAAGTaGTCCTTTCTTCTGGTACAG +
Preference number: 4 (lower is better)
Translates to: HCSGFAPVFLVERDDINKATLSK*SFLLVQ
Trigger: CTGTACCAGAAGAAAGGAGCACTTTGAAAGCGTAGC...CTTGTTTATGTCATCCCTCTCAACCAAGAATACAGGTGCAAAACCAGAACAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp GACCAGAAGTGTTTCAGATTTCAGGATATCTGCATTATAGACTTGTCAGTTGAATCTCCTACTATCCCCTaGCACAGATCCAGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: DQKCFRFQDICIIDLSVESPTIP*HRSSLL
Trigger: CAAAAGGCTGGATCTGTGCCAGGGGATAGTAGGAGA...TTCAACTGACAAGTCTATAATGCAGATATCCTGAAATCTGAAACACTTCTGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp ATGGACACACTTTTATCTCTTCATTCAGCTTCCTTCCTGAGTCTGCTATGGAGTCTCCTCTGGTCATCATaGTACTTGTTCATCCTATAC +
Preference number: 4 (lower is better)
Translates to: MDTLLSLHSASFLSLLWSLLWSS*YLFILY
Trigger: GTATAGGATGAACAAGTACCATGATGACCAGAGGAG...ACTCCATAGCAGACTCAGGAAGGAAGCTGAATGAAGAGATAAAAGTGTGTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp TGTTCTGGTTTTGCACCTGTATTCTTGGTTGAGAGGGATGACATAAACAAGGTGACAAGTTCTTATAGGTaGAGGAGACAAAGACCAGCT +
Preference number: 4 (lower is better)
Translates to: CSGFAPVFLVERDDINKVTSSYR*RRQRPA
Trigger: AGCTGGTCTTTGTCTCCTCCACCTATAAGAACTTGT...CACCTTGTTTATGTCATCCCTCTCAACCAAGAATACAGGTGCAAAACCAGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403897.4
CDS-3UTR TCA 90 bp CAATTTGCAGATGCTGGGACTAAATGTCTAAGGATATATCATTCCCATTTCAGATTCAGACACCTGTCCTaGCTGCAAGTCTTCATAGGA +
Preference number: 4 (lower is better)
Translates to: QFADAGTKCLRIYHSHFRFRHLS*LQVFIG
Trigger: TCCTATGAAGACTTGCAGTCAGGACAGGTGTCTGAA...TCTGAAATGGGAATGATATATCCTTAGACATTTAGTCCCAGCATCTGCAAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR TCA 90 bp CAATTTGCAGATGCTGGGACTAAATGTCTAAGGATATATCATTCCCATTTCAGAGATTACCCCACCATGTaGGAACATGTGGCATGTCTA +
Preference number: 4 (lower is better)
Translates to: QFADAGTKCLRIYHSHFRDYPTM*EHVACL
Trigger: TAGACATGCCACATGTTCTCACATGGTGGGGTAATC...TCTGAAATGGGAATGATATATCCTTAGACATTTAGTCCCAGCATCTGCAAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR TCA 90 bp GACCAGAAGTGTTTCAGATTTCAGGATATCTGCATTATAGACTTGTCAGTTGAACCATCCCCAAACAGCTaGAACTTAGCCTATGTCTCT +
Preference number: 4 (lower is better)
Translates to: DQKCFRFQDICIIDLSVEPSPNS*NLAYVS
Trigger: AGAGACATAGGCTAAGTTTCAGCTGTTTGGGGATGG...TTCAACTGACAAGTCTATAATGCAGATATCCTGAAATCTGAAACACTTCTGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR TCA 90 bp GCTCAAATCTCCTTTAGTCCTCTGCCAATGGACACACTTTTATCTCTTCATTCATGCCCCTATTTCCTTTaGGTTTCATGTCTACTCTCA +
Preference number: 4 (lower is better)
Translates to: AQISFSPLPMDTLLSLHSCPYFL*VSCLLS
Trigger: TGAGAGTAGACATGAAACTCAAAGGAAATAGGGGCA...TGAATGAAGAGATAAAAGTGTGTCCATTGGCAGAGGACTAAAGGAGATTTGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR GCA 90 bp CATTGTTCTGGTTTTGCACCTGTATTCTTGGTTGAGAGGGATGACATAAACAAGGTGCAATCAAGATCCTaGTGTTTTCCTAGGGAATTG +
Preference number: 4 (lower is better)
Translates to: HCSGFAPVFLVERDDINKVQSRS*CFPREL
Trigger: CAATTCCCTAGGAAAACAGCAGGATCTTGATTGCAC...CTTGTTTATGTCATCCCTCTCAACCAAGAATACAGGTGCAAAACCAGAACAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR GCA 90 bp CATAAGCTACGCTTTCAAAGTGCTCCTTTCTTCTGGTACAGTACCCATCTGACAAGACGACACCAGAATTaGTGCCAATTTCATAAAAGA +
Preference number: 4 (lower is better)
Translates to: HKLRFQSAPFFWYSTHLTRRHQN*CQFHKR
Trigger: TCTTTTATGAAATTGGCAGCAATTCTGGTGTCGTCT...TGTCAGATGGGTACTGTACCAGAAGAAAGGAGCACTTTGAAAGCGTAGCTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR GCA 90 bp ACAGGTGCTCAAATCTCCTTTAGTCCTCTGCCAATGGACACACTTTTATCTCTTGGAGGTATATCCCTTTaGCATCTTGGGTTAAGTTTT +
Preference number: 4 (lower is better)
Translates to: TGAQISFSPLPMDTLLSLGGISL*HLGLSF
Trigger: AAAACTTAACCCAAGATGGCAAAGGGATATACCTCC...AAGAGATAAAAGTGTGTCCATTGGCAGAGGACTAAAGGAGATTTGAGCACCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR GCA 90 bp GACCAGAAGTGTTTCAGATTTCAGGATATCTGCATTATAGACTTGTCAGTTGAATTCTCAGGAGTACAGTaGCATCATCATCCACTCTGG +
Preference number: 4 (lower is better)
Translates to: DQKCFRFQDICIIDLSVEFSGVQ*HHHPLW
Trigger: CCAGAGTGGATGATGATGGCACTGTACTCCTGAGAA...TTCAACTGACAAGTCTATAATGCAGATATCCTGAAATCTGAAACACTTCTGGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR GCA 90 bp TGTTCTGGTTTTGCACCTGTATTCTTGGTTGAGAGGGATGACATAAACAAGGTGTCTCCTTTAGTCCTCTaGCAATGGACACACTTTTAT +
Preference number: 4 (lower is better)
Translates to: CSGFAPVFLVERDDINKVSPLVL*QWTHFY
Trigger: ATAAAAGTGTGTCCATTGGCAGAGGACTAAAGGAGA...CACCTTGTTTATGTCATCCCTCTCAACCAAGAATACAGGTGCAAAACCAGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR GCA 90 bp GACCAGAAGTGTTTCAGATTTCAGGATATCTGCATTATAGACTTGTCAGTTGAAGGCCTTTTCCAGAAGTaGTCCCCAGAACAAGTTCTT +
Preference number: 4 (lower is better)
Translates to: DQKCFRFQDICIIDLSVEGLFQK*SPEQVL
Trigger: AAGAACTTGTTCTGGGGAGCACTTCTGGAAAAGGCC...TTCAACTGACAAGTCTATAATGCAGATATCCTGAAATCTGAAACACTTCTGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403897.4
CDS-3UTR CCA 90 bp ACAGGTGCTCAAATCTCCTTTAGTCCTCTGCCAATGGACACACTTTTATCTCTTTCCTGCCTTTCATTTTaGTCTTCTATCTCCTTTGAG +
Preference number: 4 (lower is better)
Translates to: TGAQISFSPLPMDTLLSLSCLSF*SSISFE
Trigger: CTCAAAGGAGATAGAAGACCAAAATGAAAGGCAGGA...AAGAGATAAAAGTGTGTCCATTGGCAGAGGACTAAAGGAGATTTGAGCACCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp AGGTTGTGGCCTCAGGGAAGGATGGCTAGCTTTTACAAATCTGATGTAATCTTTATCCCTTTGCCATCTTaGGTTAAGTTTTGGAAGACA +
Preference number: 4 (lower is better)
Translates to: RLWPQGRMASFYKSDVIFIPLPS*VKFWKT
Trigger: TGTCTTCCAAAACTTAACCCAAGATGGCAAAGGGAT...AAAGATTACATCAGATTTGTAAAAGCTAGCCATCCTTCCCTGAGGCCACAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp GACCAGAAGTGTTTCAGATTTCAGGATATCTGCATTATAGACTTGTCAGTTGAACATCATCATCCACTCTaGCTTCTGGAGGTATATCCC +
Preference number: 4 (lower is better)
Translates to: DQKCFRFQDICIIDLSVEHHHPL*LLEVYP
Trigger: GGGATATACCTCCAGAAGCCAGAGTGGATGATGATG...TTCAACTGACAAGTCTATAATGCAGATATCCTGAAATCTGAAACACTTCTGGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp GACCCCATCCCCAAACAGCTGAAACTTAGCCTATGTCTCTATCAATTTGCAGATAAAAGGCCATTGTTCTaGTTTTGCACCTGTATTCTT +
Preference number: 4 (lower is better)
Translates to: DPIPKQLKLSLCLYQFADKRPLF*FCTCIL
Trigger: AAGAATACAGGTGCAAAACCAGAACAATGGCCTTTT...ATCTGCAAATTGATAGAGACATAGGCTAAGTTTCAGCTGTTTGGGGATGGGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp TACCCCATAAGCTACGCTTTCAAAGTGCTCCTTTCTTCTGGTACAGTACCCATCAAATTGCATAGACTTTaGAAAAAGGCCATTGTTCTG +
Preference number: 4 (lower is better)
Translates to: YPISYAFKVLLSSGTVPIKLHRL*KKAIVL
Trigger: CAGAACAATGGCCTTTTTCCAAAGTCTATGCAATTT...GATGGGTACTGTACCAGAAGAAAGGAGCACTTTGAAAGCGTAGCTTATGGGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp TGTTCTGGTTTTGCACCTGTATTCTTGGTTGAGAGGGATGACATAAACAAGGTGAGTCTGCTATGGAGTTaGAAATCAAACAGCCATGTT +
Preference number: 4 (lower is better)
Translates to: CSGFAPVFLVERDDINKVSLLWS*KSNSHV
Trigger: AACATGGCTGTTTGATTTCCAACTCCATAGCAGACT...CACCTTGTTTATGTCATCCCTCTCAACCAAGAATACAGGTGCAAAACCAGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp TGTTCTGGTTTTGCACCTGTATTCTTGGTTGAGAGGGATGACATAAACAAGGTGTTAGTCCTCTGCCAATaGACACACTTTTATCTCTTC +
Preference number: 4 (lower is better)
Translates to: CSGFAPVFLVERDDINKVLVLCQ*THFYLF
Trigger: GAAGAGATAAAAGTGTGTCCATTGGCAGAGGACTAA...CACCTTGTTTATGTCATCCCTCTCAACCAAGAATACAGGTGCAAAACCAGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR GCA 90 bp ACAGGTGCTCAAATCTCCTTTAGTCCTCTGCCAATGGACACACTTTTATCTCTTCGACACCAGAATTGCTaGCAATTTCATAAAAGATGT +
Preference number: 4 (lower is better)
Translates to: TGAQISFSPLPMDTLLSLRHQNC*QFHKRC
Trigger: ACATCTTTTATGAAATTGGCAGCAATTCTGGTGTCG...AAGAGATAAAAGTGTGTCCATTGGCAGAGGACTAAAGGAGATTTGAGCACCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR GCA 90 bp TGTTCTGGTTTTGCACCTGTATTCTTGGTTGAGAGGGATGACATAAACAAGGTGGTGAAGAATTCATCCTaGCTTTCATTTTGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: CSGFAPVFLVERDDINKVVKNSS*LSFWSS
Trigger: AGAAGACCAAAATGAAAGGCAGGATGAATTCTTCAC...CACCTTGTTTATGTCATCCCTCTCAACCAAGAATACAGGTGCAAAACCAGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp GACCAGAAGTGTTTCAGATTTCAGGATATCTGCATTATAGACTTGTCAGTTGAAACACGCAGCATCAAGTaGATGAAACTGACAAAGTCC +
Preference number: 4 (lower is better)
Translates to: DQKCFRFQDICIIDLSVETRSIK*MKLTKS
Trigger: GGACTTTGTCAGTTTCATCCACTTGATGCTGCGTGT...TTCAACTGACAAGTCTATAATGCAGATATCCTGAAATCTGAAACACTTCTGGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp CAATTTGCAGATGCTGGGACTAAATGTCTAAGGATATATCATTCCCATTTCAGAACACGCAGCATCAAGTaGATGAAACTGACAAAGTCC +
Preference number: 4 (lower is better)
Translates to: QFADAGTKCLRIYHSHFRTRSIK*MKLTKS
Trigger: GGACTTTGTCAGTTTCATCCACTTGATGCTGCGTGT...TCTGAAATGGGAATGATATATCCTTAGACATTTAGTCCCAGCATCTGCAAATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp AGGTTGTGGCCTCAGGGAAGGATGGCTAGCTTTTACAAATCTGATGTAATCTTTAAAAGGCCATTGTTCTaGTTTTGCACCTGTATTCTT +
Preference number: 4 (lower is better)
Translates to: RLWPQGRMASFYKSDVIFKRPLF*FCTCIL
Trigger: AAGAATACAGGTGCAAAACCAGAACAATGGCCTTTT...AAAGATTACATCAGATTTGTAAAAGCTAGCCATCCTTCCCTGAGGCCACAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp AGGTTGTGGCCTCAGGGAAGGATGGCTAGCTTTTACAAATCTGATGTAATCTTTGGAGTATTTCAGATTTaGGGTTTTCAGATTTGGGAT +
Preference number: 4 (lower is better)
Translates to: RLWPQGRMASFYKSDVIFGVFQI*GFQIWD
Trigger: ATCCCAAATCTGAAAACCCCAAATCTGAAATACTCC...AAAGATTACATCAGATTTGTAAAAGCTAGCCATCCTTCCCTGAGGCCACAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
3UTR CAA 72 bp GAAAAAGGCCATTGTTCTGGTTTTGCACCTGTATTCTaGGTTGAGAGGGATGACATAAACAAGGTGTTTCAT +
Preference number: 4 (lower is better)
Translates to: EKGHCSGFAPVF*VERDDINKVFH
Trigger: ATGAAACACCTTGTTTATGTCATCCCTCTCAACCAAGAATACAGGTGCAAAACCAGAACAATGGCCTTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR TCA 90 bp CAATTTGCAGATGCTGGGACTAAATGTCTAAGGATATATCATTCCCATTTCAGAAAGCAGGAAGCCCTTTaGGAACTCAGGTGTTTTAAA +
Preference number: 4 (lower is better)
Translates to: QFADAGTKCLRIYHSHFRKQEAL*ELRCFK
Trigger: TTTAAAACACCTGAGTTCTCAAAGGGCTTCCTGCTT...TCTGAAATGGGAATGATATATCCTTAGACATTTAGTCCCAGCATCTGCAAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR GCA 90 bp ATGGACACACTTTTATCTCTTCATTCAGCTTCCTTCCTGAGTCTGCTATGGAGTGCATTAATCTCTGGATaGTTTTCAAAGAATTTGGTG +
Preference number: 4 (lower is better)
Translates to: MDTLLSLHSASFLSLLWSALISG*FSKNLV
Trigger: CACCAAATTCTTTGAAAAGCATCCAGAGATTAATGC...ACTCCATAGCAGACTCAGGAAGGAAGCTGAATGAAGAGATAAAAGTGTGTCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
3UTR CAA 72 bp TCTTCATTCAGCTTCCTTCCTGAGTCTGCTATGGAGTaGGAAATCAAACAGCCATGTTTGTTAGAATTGTTT +
Preference number: 4 (lower is better)
Translates to: SSFSFLPESAME*EIKQPCLLELF
Trigger: AAACAATTCTAACAAACATGGCTGTTTGATTTCCAACTCCATAGCAGACTCAGGAAGGAAGCTGAATGAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CCA 90 bp GCTCAAATCTCCTTTAGTCCTCTGCCAATGGACACACTTTTATCTCTTCATTCAAAATTGCATAGACTTTaGAAAAAGGCCATTGTTCTG +
Preference number: 4 (lower is better)
Translates to: AQISFSPLPMDTLLSLHSKLHRL*KKAIVL
Trigger: CAGAACAATGGCCTTTTTCCAAAGTCTATGCAATTT...TGAATGAAGAGATAAAAGTGTGTCCATTGGCAGAGGACTAAAGGAGATTTGAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR GCA 90 bp CAATTTGCAGATGCTGGGACTAAATGTCTAAGGATATATCATTCCCATTTCAGAGTTCTGAAGTTGAACTaGATTAATCTCTGGATGCTT +
Preference number: 4 (lower is better)
Translates to: QFADAGTKCLRIYHSHFRVLKLN*INLWML
Trigger: AAGCATCCAGAGATTAATGCAGTTCAACTTCAGAAC...TCTGAAATGGGAATGATATATCCTTAGACATTTAGTCCCAGCATCTGCAAATTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS CCA 90 bp ACTGCAGGCGGGGTGGCAGCTTCTGCAGCAGGGAGCCACTGCCGATaGAGCTCAGGGTGGCCGGGAAGCTGGTGTCTTCAAAGAGGCAGC +
Preference number: 5 (lower is better)
Translates to: TAGGVAASAAGSHCR*SSGWPGSWCLQRGS
Trigger: GCTGCCTCTTTGAAGACACCAGCTTCCCGGCCACCCTGAGCTCCATCGGCAGTGGCTCCCTGCTGCAGAAGCTGCCACCCCGCCTGCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS GCA 90 bp TCTTCCACTGCAGGCGGGGTGGCAGCTTCTGCAGCAGGGAGCCACTaGCGATGGAGCTCAGGGTGGCCGGGAAGCTGGTGTCTTCAAAGA +
Preference number: 5 (lower is better)
Translates to: SSTAGGVAASAAGSH*RWSSGWPGSWCLQR
Trigger: TCTTTGAAGACACCAGCTTCCCGGCCACCCTGAGCTCCATCGGCAGTGGCTCCCTGCTGCAGAAGCTGCCACCCCGCCTGCAGTGGAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS CCA 90 bp CAGCCATTCCTCAGGCACTCTGCCAGCAGGGCCTCAAAGTCCTGTTaGGGTTGCTGTGGAGACGCCCTCCTAGAGTACCTTGGCGCCAGC +
Preference number: 5 (lower is better)
Translates to: QPFLRHSASRASKSC*GCCGDALLEYLGAS
Trigger: GCTGGCGCCAAGGTACTCTAGGAGGGCGTCTCCACAGCAACCCCAACAGGACTTTGAGGCCCTGCTGGCAGAGTGCCTGAGGAATGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS CCA 90 bp CAGGCACTCTGCCAGCAGGGCCTCAAAGTCCTGTTGGGGTTGCTGTaGAGACGCCCTCCTAGAGTACCTTGGCGCCAGCTTCCATCTGCA +
Preference number: 5 (lower is better)
Translates to: QALCQQGLKVLLGLL*RRPPRVPWRQLPSA
Trigger: TGCAGATGGAAGCTGGCGCCAAGGTACTCTAGGAGGGCGTCTCCACAGCAACCCCAACAGGACTTTGAGGCCCTGCTGGCAGAGTGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS GCA 90 bp TTCCTCAGGCACTCTGCCAGCAGGGCCTCAAAGTCCTGTTGGGGTTaGTGTGGAGACGCCCTCCTAGAGTACCTTGGCGCCAGCTTCCAT +
Preference number: 5 (lower is better)
Translates to: FLRHSASRASKSCWG*CGDALLEYLGASFH
Trigger: ATGGAAGCTGGCGCCAAGGTACTCTAGGAGGGCGTCTCCACAGCAACCCCAACAGGACTTTGAGGCCCTGCTGGCAGAGTGCCTGAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS GCA 90 bp CGGGAAGCTGGTGTCTTCAAAGAGGCAGCCATTCCTCAGGCACTCTaGCAGCAGGGCCTCAAAGTCCTGTTGGGGTTGCTGTGGAGACGC +
Preference number: 5 (lower is better)
Translates to: REAGVFKEAAIPQAL*QQGLKVLLGLLWRR
Trigger: GCGTCTCCACAGCAACCCCAACAGGACTTTGAGGCCCTGCTGGCAGAGTGCCTGAGGAATGGCTGCCTCTTTGAAGACACCAGCTTCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS TCA 90 bp GGAAAGGTGGCCACAGAGACATGGCAGGTGGTGGGTACAGTCCAGTaGGTCTTCCTGAGGAGTCTCTGCTGCTCAGCCCGGGAAAGATGC +
Preference number: 5 (lower is better)
Translates to: GKVATETWQVVGTVQ*VFLRSLCCSARERC
Trigger: GCATCTTTCCCGGGCTGAGCAGCAGAGACTCCTCAGGAAGACTCACTGGACTGTACCCACCACCTGCCATGTCTCTGTGGCCACCTTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS GCA 90 bp AGGGGAACAACCCGGCTCAGGATGTCCTGGTGCAAGGCCAGAGCTTaGAAAGCAGCCAAGAACCAGCAGTCTCCTACTATCCCCTGGCAC +
Preference number: 5 (lower is better)
Translates to: RGTTRLRMSWCKARA*KAAKNQQSPTIPWH
Trigger: GTGCCAGGGGATAGTAGGAGACTGCTGGTTCTTGGCTGCTTTGCAAGCTCTGGCCTTGCACCAGGACATCCTGAGCCGGGTTGTTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CAA 90 bp CTGGAGGCGGGGGCCGCCGTAGCGGATGAGCATCAGCTGACAGACGTCATCACTGCAGCTCCCATTTACTaGAACTGTCACTCCAGTCTC +
Preference number: 5 (lower is better)
Translates to: LEAGAAVADEHQLTDVITAAPIY*NCHSSL
Trigger: GAGACTGGAGTGACAGTTCAAGTAAATGGGAGCTGC...AGTGATGACGTCTGTCAGCTGATGCTCATCCGCTACGGCGGCCCCCGCCTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR CAA 90 bp GTAGGGTGGGCATGGGTTGGTCTCAGCCAAAGGCTGCTCTTGGGCCACATGCAGAGCAGAATCTTCTCCTaGGGGCTCAGCAGCTCCCAT +
Preference number: 5 (lower is better)
Translates to: VGWAWVGLSQRLLLGHMQSRIFS*GLSSSH
Trigger: ATGGGAGCTGCTGAGCCCCAAGGAGAAGATTCTGCT...CTGCATGTGGCCCAAGAGCAGCCTTTGGCTGAGACCAACCCATGCCCACCCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS CCA 90 bp CCTCCTAGAGTACCTTGGCGCCAGCTTCCATCTGCATCGGAAAGGTaGCCACAGAGACATGGCAGGTGGTGGGTACAGTCCAGTGAGTCT +
Preference number: 5 (lower is better)
Translates to: PPRVPWRQLPSASER*PQRHGRWWVQSSES
Trigger: AGACTCACTGGACTGTACCCACCACCTGCCATGTCTCTGTGGCCACCTTTCCGATGCAGATGGAAGCTGGCGCCAAGGTACTCTAGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS TCA 90 bp AGAGCCCAGAACCGGAAGATGCCAGCATACTTCTCAGTGAAACTCTaGTTCAGGGGAACAACCCGGCTCAGGATGTCCTGGTGCAAGGCC +
Preference number: 5 (lower is better)
Translates to: RAQNRKMPAYFSVKL*FRGTTRLRMSWCKA
Trigger: GGCCTTGCACCAGGACATCCTGAGCCGGGTTGTTCCCCTGAATCAGAGTTTCACTGAGAAGTATGCTGGCATCTTCCGGTTCTGGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS TCA 90 bp GGAAAGGTGGCCACAGAGACATGGCAGGTGGTGGGTACAGTCCAGTaGGTCTTCCTGAGGAGTCTCTGCTGCTCCTGCACAGGAGATTTT +
Preference number: 5 (lower is better)
Translates to: GKVATETWQVVGTVQ*VFLRSLCCSCTGDF
Trigger: AAAATCTCCTGTGCAGGAGCAGCAGAGACTCCTCAGGAAGACTCACTGGACTGTACCCACCACCTGCCATGTCTCTGTGGCCACCTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403897.4
CDS TCA 90 bp GGAACCAGAGAGCCCAGAACCGGAAGATGCCAGCATACTTCTCAGTaGAACTCTGATTCAGGGGAACAACCCGGCTCAGGATGTCCTGGT +
Preference number: 5 (lower is better)
Translates to: GTREPRTGRCQHTSQ*NSDSGEQPGSGCPG
Trigger: ACCAGGACATCCTGAGCCGGGTTGTTCCCCTGAATCAGAGTTTCACTGAGAAGTATGCTGGCATCTTCCGGTTCTGGGCTCTCTGGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS TCA 90 bp CAGAACCAGAACCGGAAGATGCCAGCATACTTCTCAGTGAAACTCTaGTTCAGGGGAACAACCCGGCTCAGGATGTCCTGGTGCAAGGCC +
Preference number: 5 (lower is better)
Translates to: QNQNRKMPAYFSVKL*FRGTTRLRMSWCKA
Trigger: GGCCTTGCACCAGGACATCCTGAGCCGGGTTGTTCCCCTGAATCAGAGTTTCACTGAGAAGTATGCTGGCATCTTCCGGTTCTGGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403897.4
CDS TCA 90 bp TGTCACCCCTCCAGTGAAGTCTACAAGGGCTTCAGACACCTGTCCTaGCTGCAAGTCTTCATAGGAACCAGAGAGCCCAGAACCGGAAGA +
Preference number: 5 (lower is better)
Translates to: CHPSSEVYKGFRHLS*LQVFIGTREPRTGR
Trigger: TCTTCCGGTTCTGGGCTCTCTGGTTCCTATGAAGACTTGCAGTCAGGACAGGTGTCTGAAGCCCTTGTAGACTTCACTGGAGGGGTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR CAA 90 bp AGAATGCTTAGGCCATGTCAGGTAACATCTCCGCTTGTGACAAGGTTGTGGCCTAAAGTCCTGTTGGGGTaGCTGTGGAGACGCCCTCCT +
Preference number: 5 (lower is better)
Translates to: RMLRPCQVTSPLVTRLWPKVLLG*LWRRPP
Trigger: AGGAGGGCGTCTCCACAGCAACCCCAACAGGACTTT...AGGCCACAACCTTGTCACAAGCGGAGATGTTACCTGACATGGCCTAAGCATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CAA 90 bp ATGGACACACTTTTATCTCTTCATTCAGCTTCCTTCCTGAGTCTGCTATGGAGTAGGAGAGGCTTCCGCTaGCGGCACCTGTGCCTGGGC +
Preference number: 5 (lower is better)
Translates to: MDTLLSLHSASFLSLLWSRRGFR*RHLCLG
Trigger: GCCCAGGCACAGGTGCCGCAAGCGGAAGCCTCTCCT...ACTCCATAGCAGACTCAGGAAGGAAGCTGAATGAAGAGATAAAAGTGTGTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS TCA 90 bp CATAGTGCCAGAACCAGAACCGGAAGATGCCAGCATACTTCTCAGTaGAACTCTGATTCAGGGGAACAACCCGGCTCAGGATGTCCTGGT +
Preference number: 5 (lower is better)
Translates to: HSARTRTGRCQHTSQ*NSDSGEQPGSGCPG
Trigger: ACCAGGACATCCTGAGCCGGGTTGTTCCCCTGAATCAGAGTTTCACTGAGAAGTATGCTGGCATCTTCCGGTTCTGGTTCTGGCACTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403897.4
CDS TCA 90 bp TGTCACCCCTCCAGTGAAGTCTACAAGGGCTTCAGACACCTGTCCTaGCTGCAAGTCTTCATAGGAACCAGAGAGCTTGGCATAGGCCTT +
Preference number: 5 (lower is better)
Translates to: CHPSSEVYKGFRHLS*LQVFIGTRELGIGL
Trigger: AAGGCCTATGCCAAGCTCTCTGGTTCCTATGAAGACTTGCAGTCAGGACAGGTGTCTGAAGCCCTTGTAGACTTCACTGGAGGGGTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403897.4
CDS CCA 90 bp CATAGGCCTTTTCCAGAAGTGCTCCCCAGAACAAGTTCTTATAGGTaGAGGAGACAAAGACCAGCTGGCCAGCCTCATTCACAGGCAGAC +
Preference number: 5 (lower is better)
Translates to: HRPFPEVLPRTSSYR*RRQRPAGQPHSQAD
Trigger: GTCTGCCTGTGAATGAGGCTGGCCAGCTGGTCTTTGTCTCCTCCACCTATAAGAACTTGTTCTGGGGAGCACTTCTGGAAAAGGCCTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403897.4
CDS-3UTR CAA 90 bp GCGTGCAGCTGCTCCCAGTTCAGGTATCCTGACCCACGGTCTTGCTTGTGGAAATGGAGGTATATCCCTTaGCCATCTTGGGTTAAGTTT +
Preference number: 5 (lower is better)
Translates to: ACSCSQFRYPDPRSCLWKWRYIP*PSWVKF
Trigger: AAACTTAACCCAAGATGGCAAAGGGATATACCTCCA...TTTCCACAAGCAAGACCGTGGGTCAGGATACCTGAACTGGGAGCAGCTGCACGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR CAA 90 bp TACCCCATAAGCTACGCTTTCAAAGTGCTCCTTTCTTCTGGTACAGTACCCATCCCGCTTGTGACAAGGTaGTGGCCTCAGGGAAGGATG +
Preference number: 5 (lower is better)
Translates to: YPISYAFKVLLSSGTVPIPLVTR*WPQGRM
Trigger: CATCCTTCCCTGAGGCCACAACCTTGTCACAAGCGG...GATGGGTACTGTACCAGAAGAAAGGAGCACTTTGAAAGCGTAGCTTATGGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CAA 90 bp GTGGGCATGGGTTGGTCTCAGCCAAAGGCTGCTCTTGGGCCACATGCAGAGTCTTGGAGTATTTCAGATTaGGGGTTTTCAGATTTGGGA +
Preference number: 5 (lower is better)
Translates to: VGMGWSQPKAALGPHAESWSISD*GFSDLG
Trigger: TCCCAAATCTGAAAACCCCAAATCTGAAATACTCCA...AGACTCTGCATGTGGCCCAAGAGCAGCCTTTGGCTGAGACCAACCCATGCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CAA 90 bp GCATTAAGGTCCAGTAAGGCCAGGATCCCCTGGCAGGCTTCCAGGCTAAAGAAGTATTCAGGTCTATGTTaGCAGGTCACCTTCCTGATT +
Preference number: 5 (lower is better)
Translates to: ALRSSKARIPWQASRLKKYSGLC*QVTFLI
Trigger: AATCAGGAAGGTGACCTGCAAACATAGACCTGAATA...CTTCTTTAGCCTGGAAGCCTGCCAGGGGATCCTGGCCTTACTGGACCTTAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR CAA 90 bp TACCCCATAAGCTACGCTTTCAAAGTGCTCCTTTCTTCTGGTACAGTACCCATCGTCTGCTCCCCAGACTaGACCAGGTCATCTGGTTCA +
Preference number: 5 (lower is better)
Translates to: YPISYAFKVLLSSGTVPIVCSPD*TRSSGS
Trigger: TGAACCAGATGACCTGGTCAAGTCTGGGGAGCAGAC...GATGGGTACTGTACCAGAAGAAAGGAGCACTTTGAAAGCGTAGCTTATGGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CAA 90 bp GTGACAAGGTTGTGGCCTCAGGGAAGGATGGCTAGCTTTTACAAATCTGATGTAAGCCAAAGGCTGCTCTaGGGCCACATGCAGAGTCTT +
Preference number: 5 (lower is better)
Translates to: VTRLWPQGRMASFYKSDVSQRLL*GHMQSL
Trigger: AAGACTCTGCATGTGGCCCAAGAGCAGCCTTTGGCT...TACATCAGATTTGTAAAAGCTAGCCATCCTTCCCTGAGGCCACAACCTTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CAA 90 bp GTTTTGGAAGACATCCTCCATGTTCTCTACACGCAGCATCAAGTGGATGAAACTCCGCTTGTGACAAGGTaGTGGCCTCAGGGAAGGATG +
Preference number: 5 (lower is better)
Translates to: VLEDILHVLYTQHQVDETPLVTR*WPQGRM
Trigger: CATCCTTCCCTGAGGCCACAACCTTGTCACAAGCGG...AGTTTCATCCACTTGATGCTGCGTGTAGAGAACATGGAGGATGTCTTCCAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR CAA 90 bp GACCCCATCCCCAAACAGCTGAAACTTAGCCTATGTCTCTATCAATTTGCAGATACCCAAGCGAGGCTGTaGAGTGGGATGGTGCAATCA +
Preference number: 5 (lower is better)
Translates to: DPIPKQLKLSLCLYQFADTQARL*SGMVQS
Trigger: TGATTGCACCATCCCACTCAACAGCCTCGCTTGGGT...ATCTGCAAATTGATAGAGACATAGGCTAAGTTTCAGCTGTTTGGGGATGGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR CAA 90 bp TGTTCTGGTTTTGCACCTGTATTCTTGGTTGAGAGGGATGACATAAACAAGGTGAAAGTCCTGTTGGGGTaGCTGTGGAGACGCCCTCCT +
Preference number: 5 (lower is better)
Translates to: CSGFAPVFLVERDDINKVKVLLG*LWRRPP
Trigger: AGGAGGGCGTCTCCACAGCAACCCCAACAGGACTTT...CACCTTGTTTATGTCATCCCTCTCAACCAAGAATACAGGTGCAAAACCAGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CAA 90 bp GACCCCATCCCCAAACAGCTGAAACTTAGCCTATGTCTCTATCAATTTGCAGATTGGGCTTCTGCCAGGTaGATGGTCATTGTCACCCCT +
Preference number: 5 (lower is better)
Translates to: DPIPKQLKLSLCLYQFADWASAR*MVIVTP
Trigger: AGGGGTGACAATGACCATCAACCTGGCAGAAGCCCA...ATCTGCAAATTGATAGAGACATAGGCTAAGTTTCAGCTGTTTGGGGATGGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CAA 90 bp GTTTTGGAAGACATCCTCCATGTTCTCTACACGCAGCATCAAGTGGATGAAACTAGCCAAAGGCTGCTCTaGGGCCACATGCAGAGTCTT +
Preference number: 5 (lower is better)
Translates to: VLEDILHVLYTQHQVDETSQRLL*GHMQSL
Trigger: AAGACTCTGCATGTGGCCCAAGAGCAGCCTTTGGCT...AGTTTCATCCACTTGATGCTGCGTGTAGAGAACATGGAGGATGTCTTCCAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR CAA 90 bp GCCAGGTTGATGGTCATTGTCACCCCTCCAGTGAAGTCTACAAGGGCTTCAGACTTTGCACCTGTATTCTaGGTTGAGAGGGATGACATA +
Preference number: 5 (lower is better)
Translates to: ARLMVIVTPPVKSTRASDFAPVF*VERDDI
Trigger: TATGTCATCCCTCTCAACCAAGAATACAGGTGCAAA...GTCTGAAGCCCTTGTAGACTTCACTGGAGGGGTGACAATGACCATCAACCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR CAA 90 bp GTTGTATGGAGGCTAACCACACCAGCTCTGGAGTCAGAATGCTTAGGCCATGTCGAGTCTGCTATGGAGTaGGAAATCAAACAGCCATGT +
Preference number: 5 (lower is better)
Translates to: VVWRLTTPALESECLGHVESAME*EIKQPC
Trigger: ACATGGCTGTTTGATTTCCAACTCCATAGCAGACTC...GACATGGCCTAAGCATTCTGACTCCAGAGCTGGTGTGGTTAGCCTCCATACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CAA 90 bp AGGTTGTGGCCTCAGGGAAGGATGGCTAGCTTTTACAAATCTGATGTAATCTTTTGGGCTTCTGCCAGGTaGATGGTCATTGTCACCCCT +
Preference number: 5 (lower is better)
Translates to: RLWPQGRMASFYKSDVIFWASAR*MVIVTP
Trigger: AGGGGTGACAATGACCATCAACCTGGCAGAAGCCCA...AAAGATTACATCAGATTTGTAAAAGCTAGCCATCCTTCCCTGAGGCCACAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CAA 90 bp GTGACAAGGTTGTGGCCTCAGGGAAGGATGGCTAGCTTTTACAAATCTGATGTACAGGGGTTCCGTAGCTaGACGAGATATTCAGGTCTA +
Preference number: 5 (lower is better)
Translates to: VTRLWPQGRMASFYKSDVQGFRS*TRYSGL
Trigger: TAGACCTGAATATCTCGTCAAGCTACGGAACCCCTG...TACATCAGATTTGTAAAAGCTAGCCATCCTTCCCTGAGGCCACAACCTTGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CAA 90 bp GTTGTATGGAGGCTAACCACACCAGCTCTGGAGTCAGAATGCTTAGGCCATGTCAATCATACGGAGATATaGTCAGAAGAAGACTACCCC +
Preference number: 5 (lower is better)
Translates to: VVWRLTTPALESECLGHVNHTEI*SEEDYP
Trigger: GGGGTAGTCTTCTTCTGACAATATCTCCGTATGATT...GACATGGCCTAAGCATTCTGACTCCAGAGCTGGTGTGGTTAGCCTCCATACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CAA 90 bp GTTGTATGGAGGCTAACCACACCAGCTCTGGAGTCAGAATGCTTAGGCCATGTCATGCCCCTATTTCCTTaGAGTTTCATGTCTACTCTC +
Preference number: 5 (lower is better)
Translates to: VVWRLTTPALESECLGHVMPLFP*SFMSTL
Trigger: GAGAGTAGACATGAAACTCAAAGGAAATAGGGGCAT...GACATGGCCTAAGCATTCTGACTCCAGAGCTGGTGTGGTTAGCCTCCATACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CAA 90 bp CATTGTTCTGGTTTTGCACCTGTATTCTTGGTTGAGAGGGATGACATAAACAAGGTGCAAGGCCAGAGCTaGCAAAGCAGCCAAGAACCA +
Preference number: 5 (lower is better)
Translates to: HCSGFAPVFLVERDDINKVQGQS*QSSQEP
Trigger: TGGTTCTTGGCTGCTTTGCAAGCTCTGGCCTTGCAC...CTTGTTTATGTCATCCCTCTCAACCAAGAATACAGGTGCAAAACCAGAACAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CAA 90 bp GTTGTATGGAGGCTAACCACACCAGCTCTGGAGTCAGAATGCTTAGGCCATGTCTGGAGTATTTCAGATTaGGGGTTTTCAGATTTGGGA +
Preference number: 5 (lower is better)
Translates to: VVWRLTTPALESECLGHVWSISD*GFSDLG
Trigger: TCCCAAATCTGAAAACCCCAAATCTGAAATACTCCA...GACATGGCCTAAGCATTCTGACTCCAGAGCTGGTGTGGTTAGCCTCCATACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CAA 90 bp CTACCCCATAAGCTACGCTTTCAAAGTGCTCCTTTCTTCTGGTACAGTACCCATCAGGAGGTTCTGAAGTaGAACTGCATTAATCTCTGG +
Preference number: 5 (lower is better)
Translates to: LPHKLRFQSAPFFWYSTHQEVLK*NCINLW
Trigger: CCAGAGATTAATGCAGTTCAACTTCAGAACCTCCTG...ATGGGTACTGTACCAGAAGAAAGGAGCACTTTGAAAGCGTAGCTTATGGGGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CAA 90 bp CATTGTTCTGGTTTTGCACCTGTATTCTTGGTTGAGAGGGATGACATAAACAAGCAGGGGTTCCGTAGCTaGACGAGATATTCAGGTCTA +
Preference number: 5 (lower is better)
Translates to: HCSGFAPVFLVERDDINKQGFRS*TRYSGL
Trigger: TAGACCTGAATATCTCGTCAAGCTACGGAACCCCTG...CTTGTTTATGTCATCCCTCTCAACCAAGAATACAGGTGCAAAACCAGAACAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CAA 90 bp AGGTTGTGGCCTCAGGGAAGGATGGCTAGCTTTTACAAATCTGATGTAATCTTTCTCACTTCTTTCTCCTaGAGAAACCTATCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: RLWPQGRMASFYKSDVIFLTSFS*RNLSGW
Trigger: CCAGCCTGATAGGTTTCTCAAGGAGAAAGAAGTGAG...AAAGATTACATCAGATTTGTAAAAGCTAGCCATCCTTCCCTGAGGCCACAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CAA 90 bp CATAAGCTACGCTTTCAAAGTGCTCCTTTCTTCTGGTACAGTACCCATCTGACACAGGAGGTTCTGAAGTaGAACTGCATTAATCTCTGG +
Preference number: 5 (lower is better)
Translates to: HKLRFQSAPFFWYSTHLTQEVLK*NCINLW
Trigger: CCAGAGATTAATGCAGTTCAACTTCAGAACCTCCTG...TGTCAGATGGGTACTGTACCAGAAGAAAGGAGCACTTTGAAAGCGTAGCTTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CAA 90 bp CAATTTGCAGATGCTGGGACTAAATGTCTAAGGATATATCATTCCCATTTCAGAGTCTGCTCCCCAGACTaGACCAGGTCATCTGGTTCA +
Preference number: 5 (lower is better)
Translates to: QFADAGTKCLRIYHSHFRVCSPD*TRSSGS
Trigger: TGAACCAGATGACCTGGTCAAGTCTGGGGAGCAGAC...TCTGAAATGGGAATGATATATCCTTAGACATTTAGTCCCAGCATCTGCAAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CAA 90 bp AGAATGCTTAGGCCATGTCAGGTAACATCTCCGCTTGTGACAAGGTTGTGGCCTTATGTCTCTATCAATTaGCAGATGCTGGGACTAAAT +
Preference number: 5 (lower is better)
Translates to: RMLRPCQVTSPLVTRLWPYVSIN*QMLGLN
Trigger: ATTTAGTCCCAGCATCTGCAAATTGATAGAGACATA...AGGCCACAACCTTGTCACAAGCGGAGATGTTACCTGACATGGCCTAAGCATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CAA 90 bp GACCCCATCCCCAAACAGCTGAAACTTAGCCTATGTCTCTATCAATTTGCAGATGCCATTGTTCTGGTTTaGCACCTGTATTCTTGGTTG +
Preference number: 5 (lower is better)
Translates to: DPIPKQLKLSLCLYQFADAIVLV*HLYSWL
Trigger: CAACCAAGAATACAGGTGCAAAACCAGAACAATGGC...ATCTGCAAATTGATAGAGACATAGGCTAAGTTTCAGCTGTTTGGGGATGGGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CAA 90 bp CATAAGCTACGCTTTCAAAGTGCTCCTTTCTTCTGGTACAGTACCCATCTGACATATTCAGGTCTATGTTaGCAGGTCACCTTCCTGATT +
Preference number: 5 (lower is better)
Translates to: HKLRFQSAPFFWYSTHLTYSGLC*QVTFLI
Trigger: AATCAGGAAGGTGACCTGCAAACATAGACCTGAATA...TGTCAGATGGGTACTGTACCAGAAGAAAGGAGCACTTTGAAAGCGTAGCTTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CAA 90 bp CATAAGCTACGCTTTCAAAGTGCTCCTTTCTTCTGGTACAGTACCCATCTGACAATGCCCCTATTTCCTTaGAGTTTCATGTCTACTCTC +
Preference number: 5 (lower is better)
Translates to: HKLRFQSAPFFWYSTHLTMPLFP*SFMSTL
Trigger: GAGAGTAGACATGAAACTCAAAGGAAATAGGGGCAT...TGTCAGATGGGTACTGTACCAGAAGAAAGGAGCACTTTGAAAGCGTAGCTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CAA 90 bp TGTTCTGGTTTTGCACCTGTATTCTTGGTTGAGAGGGATGACATAAACAAGGTGGAGTCTGCTATGGAGTaGGAAATCAAACAGCCATGT +
Preference number: 5 (lower is better)
Translates to: CSGFAPVFLVERDDINKVESAME*EIKQPC
Trigger: ACATGGCTGTTTGATTTCCAACTCCATAGCAGACTC...CACCTTGTTTATGTCATCCCTCTCAACCAAGAATACAGGTGCAAAACCAGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CAA 90 bp TTTACAGATAACCAGGAGCACGAAATGTGTTTTAAAGTCCTGCAGCGTCATCCATGGATTTTTCTGCTTTaGGTGTTTCCCTTACCCAAG +
Preference number: 5 (lower is better)
Translates to: FTDNQEHEMCFKVLQRHPWIFLL*VFPLPK
Trigger: CTTGGGTAAGGGAAACACCAAAAGCAGAAAAATCCA...TGGATGACGCTGCAGGACTTTAAAACACATTTCGTGCTCCTGGTTATCTGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS-3UTR CAA 90 bp GACCAGAAGTGTTTCAGATTTCAGGATATCTGCATTATAGACTTGTCAGTTGAAGCAGCTCCCATTTACTaGAACTGTCACTCCAGTCTC +
Preference number: 5 (lower is better)
Translates to: DQKCFRFQDICIIDLSVEAAPIY*NCHSSL
Trigger: GAGACTGGAGTGACAGTTCAAGTAAATGGGAGCTGC...TTCAACTGACAAGTCTATAATGCAGATATCCTGAAATCTGAAACACTTCTGGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CAA 90 bp ACAGGTGCTCAAATCTCCTTTAGTCCTCTGCCAATGGACACACTTTTATCTCTTTGGAGGTATATCCCTTaGCCATCTTGGGTTAAGTTT +
Preference number: 5 (lower is better)
Translates to: TGAQISFSPLPMDTLLSLWRYIP*PSWVKF
Trigger: AAACTTAACCCAAGATGGCAAAGGGATATACCTCCA...AAGAGATAAAAGTGTGTCCATTGGCAGAGGACTAAAGGAGATTTGAGCACCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CAA 90 bp ATGGACACACTTTTATCTCTTCATTCAGCTTCCTTCCTGAGTCTGCTATGGAGTAATCATACGGAGATATaGTCAGAAGAAGACTACCCC +
Preference number: 5 (lower is better)
Translates to: MDTLLSLHSASFLSLLWSNHTEI*SEEDYP
Trigger: GGGGTAGTCTTCTTCTGACAATATCTCCGTATGATT...ACTCCATAGCAGACTCAGGAAGGAAGCTGAATGAAGAGATAAAAGTGTGTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CAA 90 bp TGGAAAAAGGCCATTGTTCTGGTTTTGCACCTGTATTCTTGGTTGAGAGGGATGTTTAAATCTACTAGGTaGCCCCAGATCCAATCATAC +
Preference number: 5 (lower is better)
Translates to: WKKAIVLVLHLYSWLRGMFKSTR*PQIQSY
Trigger: GTATGATTGGATCTGGGGCAACCTAGTAGATTTAAA...CATCCCTCTCAACCAAGAATACAGGTGCAAAACCAGAACAATGGCCTTTTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CAA 90 bp ACAGGTGCTCAAATCTCCTTTAGTCCTCTGCCAATGGACACACTTTTATCTCTTTTTGCACCTGTATTCTaGGTTGAGAGGGATGACATA +
Preference number: 5 (lower is better)
Translates to: TGAQISFSPLPMDTLLSLFAPVF*VERDDI
Trigger: TATGTCATCCCTCTCAACCAAGAATACAGGTGCAAA...AAGAGATAAAAGTGTGTCCATTGGCAGAGGACTAAAGGAGATTTGAGCACCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CAA 90 bp ATGGACACACTTTTATCTCTTCATTCAGCTTCCTTCCTGAGTCTGCTATGGAGTTTTGGAAAAAGGCCATaGTTCTGGTTTTGCACCTGT +
Preference number: 5 (lower is better)
Translates to: MDTLLSLHSASFLSLLWSFGKRP*FWFCTC
Trigger: ACAGGTGCAAAACCAGAACAATGGCCTTTTTCCAAA...ACTCCATAGCAGACTCAGGAAGGAAGCTGAATGAAGAGATAAAAGTGTGTCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CAA 90 bp ATGGACACACTTTTATCTCTTCATTCAGCTTCCTTCCTGAGTCTGCTATGGAGTTTTAAATCTACTAGGTaGCCCCAGATCCAATCATAC +
Preference number: 5 (lower is better)
Translates to: MDTLLSLHSASFLSLLWSFKSTR*PQIQSY
Trigger: GTATGATTGGATCTGGGGCAACCTAGTAGATTTAAA...ACTCCATAGCAGACTCAGGAAGGAAGCTGAATGAAGAGATAAAAGTGTGTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CAA 90 bp ACAGGTGCTCAAATCTCCTTTAGTCCTCTGCCAATGGACACACTTTTATCTCTTTATGTCTCTATCAATTaGCAGATGCTGGGACTAAAT +
Preference number: 5 (lower is better)
Translates to: TGAQISFSPLPMDTLLSLYVSIN*QMLGLN
Trigger: ATTTAGTCCCAGCATCTGCAAATTGATAGAGACATA...AAGAGATAAAAGTGTGTCCATTGGCAGAGGACTAAAGGAGATTTGAGCACCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS-3UTR CAA 90 bp CAATTTGCAGATGCTGGGACTAAATGTCTAAGGATATATCATTCCCATTTCAGATTTGGAAAAAGGCCATaGTTCTGGTTTTGCACCTGT +
Preference number: 5 (lower is better)
Translates to: QFADAGTKCLRIYHSHFRFGKRP*FWFCTC
Trigger: ACAGGTGCAAAACCAGAACAATGGCCTTTTTCCAAA...TCTGAAATGGGAATGATATATCCTTAGACATTTAGTCCCAGCATCTGCAAATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS CAA 90 bp GCAGCCATTCCTCAGGCACTCTGCCAGCAGGGCCTCAAAGTCCTGTaGGGGTTGCTGTGGAGACGCCCTCCTAGAGTACCTTGGCGCCAG +
Preference number: 6 (lower is better)
Translates to: AAIPQALCQQGLKVL*GLLWRRPPRVPWRQ
Trigger: CTGGCGCCAAGGTACTCTAGGAGGGCGTCTCCACAGCAACCCCAACAGGACTTTGAGGCCCTGCTGGCAGAGTGCCTGAGGAATGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS GCA 72 bp CACTCTGCCAGCAGGGCCTCAAAGTCCTGTTGGGGTTaGTGTGGAGACGCCCTCCTAGAGTACCTTGGCGCC +
Preference number: 6 (lower is better)
Translates to: HSASRASKSCWG*CGDALLEYLGA
Trigger: GGCGCCAAGGTACTCTAGGAGGGCGTCTCCACAGCAACCCCAACAGGACTTTGAGGCCCTGCTGGCAGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS CAA 72 bp GCACTCTGCCAGCAGGGCCTCAAAGTCCTGTTGGGGTaGCTGTGGAGACGCCCTCCTAGAGTACCTTGGCGC +
Preference number: 6 (lower is better)
Translates to: ALCQQGLKVLLG*LWRRPPRVPWR
Trigger: GCGCCAAGGTACTCTAGGAGGGCGTCTCCACAGCAACCCCAACAGGACTTTGAGGCCCTGCTGGCAGAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS TCA 72 bp GCCACAGAGACATGGCAGGTGGTGGGTACAGTCCAGTaGGTCTTCCTGAGGAGTCTCTGCTGCTCAGCCCGG +
Preference number: 6 (lower is better)
Translates to: ATETWQVVGTVQ*VFLRSLCCSAR
Trigger: CCGGGCTGAGCAGCAGAGACTCCTCAGGAAGACTCACTGGACTGTACCCACCACCTGCCATGTCTCTGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS CCA 72 bp TGCCAGCAGGGCCTCAAAGTCCTGTTGGGGTTGCTGTaGAGACGCCCTCCTAGAGTACCTTGGCGCCAGCTT +
Preference number: 6 (lower is better)
Translates to: CQQGLKVLLGLL*RRPPRVPWRQL
Trigger: AAGCTGGCGCCAAGGTACTCTAGGAGGGCGTCTCCACAGCAACCCCAACAGGACTTTGAGGCCCTGCTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS CAA 90 bp ATTCCTCAGGCACTCTGCCAGCAGGGCCTCAAAGTCCTGTTGGGGTaGCTGTGGAGACGCCCTCCTAGAGTACCTTGGCGCCAGCTTCCA +
Preference number: 6 (lower is better)
Translates to: IPQALCQQGLKVLLG*LWRRPPRVPWRQLP
Trigger: TGGAAGCTGGCGCCAAGGTACTCTAGGAGGGCGTCTCCACAGCAACCCCAACAGGACTTTGAGGCCCTGCTGGCAGAGTGCCTGAGGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS GCA 72 bp TTCCTGAGGAGTCTCTGCTGCTCAGCCCGGGAAAGATaGTCAGGAACTGGTGCTGGTCCTGGGGTCCTTCAG +
Preference number: 6 (lower is better)
Translates to: FLRSLCCSARER*SGTGAGPGVLQ
Trigger: CTGAAGGACCCCAGGACCAGCACCAGTTCCTGAGCATCTTTCCCGGGCTGAGCAGCAGAGACTCCTCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS CCA 72 bp GTACCTTGGCGCCAGCTTCCATCTGCATCGGAAAGGTaGCCACAGAGACATGGCAGGTGGTGGGTACAGTCC +
Preference number: 6 (lower is better)
Translates to: VPWRQLPSASER*PQRHGRWWVQS
Trigger: GGACTGTACCCACCACCTGCCATGTCTCTGTGGCCACCTTTCCGATGCAGATGGAAGCTGGCGCCAAGGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS CCA 72 bp TTGGGGTTGCTGTGGAGACGCCCTCCTAGAGTACCTTaGCGCCAGCTTCCATCTGCATCGGAAAGGTGGCCA +
Preference number: 6 (lower is better)
Translates to: LGLLWRRPPRVP*RQLPSASERWP
Trigger: TGGCCACCTTTCCGATGCAGATGGAAGCTGGCGCCAAGGTACTCTAGGAGGGCGTCTCCACAGCAACCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS CAA 90 bp CAGGGGAACAACCCGGCTCAGGATGTCCTGGTGCAAGGCCAGAGCTaGCAAAGCAGCCAAGAACCAGCAGTCTCCTACTATCCCCTGGCA +
Preference number: 6 (lower is better)
Translates to: QGNNPAQDVLVQGQS*QSSQEPAVSYYPLA
Trigger: TGCCAGGGGATAGTAGGAGACTGCTGGTTCTTGGCTGCTTTGCAAGCTCTGGCCTTGCACCAGGACATCCTGAGCCGGGTTGTTCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS TCA 72 bp CATGGCAGGTGGTGGGTACAGTCCAGTGAGTCTTCCTaGGGAGTCTCTGCTGCTCAGCCCGGGAAAGATGCT +
Preference number: 6 (lower is better)
Translates to: HGRWWVQSSESS*GVSAAQPGKDA
Trigger: AGCATCTTTCCCGGGCTGAGCAGCAGAGACTCCTCAGGAAGACTCACTGGACTGTACCCACCACCTGCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS GCA 72 bp CTGCTGCTCAGCCCGGGAAAGATGCTCAGGAACTGGTaGTGGTCCTGGGGTCCTTCAGCATGGATTTTTCTG +
Preference number: 6 (lower is better)
Translates to: LLLSPGKMLRNW*WSWGPSAWIFL
Trigger: CAGAAAAATCCATGCTGAAGGACCCCAGGACCAGCACCAGTTCCTGAGCATCTTTCCCGGGCTGAGCAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS GCA 72 bp ACCCGGCTCAGGATGTCCTGGTGCAAGGCCAGAGCTTaGAAAGCAGCCAAGAACCAGCAGTCTCCTACTATC +
Preference number: 6 (lower is better)
Translates to: TRLRMSWCKARA*KAAKNQQSPTI
Trigger: GATAGTAGGAGACTGCTGGTTCTTGGCTGCTTTGCAAGCTCTGGCCTTGCACCAGGACATCCTGAGCCGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS CCA 72 bp CTGCTCAGCCCGGGAAAGATGCTCAGGAACTGGTGCTaGTCCTGGGGTCCTTCAGCATGGATTTTTCTGCTT +
Preference number: 6 (lower is better)
Translates to: LLSPGKMLRNWC*SWGPSAWIFLL
Trigger: AAGCAGAAAAATCCATGCTGAAGGACCCCAGGACCAGCACCAGTTCCTGAGCATCTTTCCCGGGCTGAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS CCA 72 bp TCTCTGCTGCTCAGCCCGGGAAAGATGCTCAGGAACTaGTGCTGGTCCTGGGGTCCTTCAGCATGGATTTTT +
Preference number: 6 (lower is better)
Translates to: SLLLSPGKMLRN*CWSWGPSAWIF
Trigger: AAAAATCCATGCTGAAGGACCCCAGGACCAGCACCAGTTCCTGAGCATCTTTCCCGGGCTGAGCAGCAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS TCA 72 bp AACCGGAAGATGCCAGCATACTTCTCAGTGAAACTCTaGTTCAGGGGAACAACCCGGCTCAGGATGTCCTGG +
Preference number: 6 (lower is better)
Translates to: NRKMPAYFSVKL*FRGTTRLRMSW
Trigger: CCAGGACATCCTGAGCCGGGTTGTTCCCCTGAATCAGAGTTTCACTGAGAAGTATGCTGGCATCTTCCGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398824.6
ENST00000403897.4
CDS TCA 72 bp TCCAGTGAAGTCTACAAGGGCTTCAGACACCTGTCCTaGCTGCAAGTCTTCATAGGAACCAGAGAGCCCAGA +
Preference number: 6 (lower is better)
Translates to: SSEVYKGFRHLS*LQVFIGTREPR
Trigger: TCTGGGCTCTCTGGTTCCTATGAAGACTTGCAGTCAGGACAGGTGTCTGAAGCCCTTGTAGACTTCACTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398824.6
CDS TCA 72 bp TCCAGTGAAGTCTACAAGGGCTTCAGACACCTGTCCTaGCTGCAAGTCTTCATAGGAACCAGAGAGCTTGGC +
Preference number: 6 (lower is better)
Translates to: SSEVYKGFRHLS*LQVFIGTRELG
Trigger: GCCAAGCTCTCTGGTTCCTATGAAGACTTGCAGTCAGGACAGGTGTCTGAAGCCCTTGTAGACTTCACTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403897.4
CDS GCA 72 bp GGAACCAGAGAGCTTGGCATAGGCCTTTTCCAGAAGTaGTCCCCAGAACAAGTTCTTATAGGTGGAGGAGAC +
Preference number: 6 (lower is better)
Translates to: GTRELGIGLFQK*SPEQVLIGGGD
Trigger: GTCTCCTCCACCTATAAGAACTTGTTCTGGGGAGCACTTCTGGAAAAGGCCTATGCCAAGCTCTCTGGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403897.4
CDS TCA 72 bp TGGTGCAATCAAGATCCTGCTGTTTTCCTAGGGAATTaGCCTCAGCAACTGAAGGAGAGGCGATTCAAAGCA +
Preference number: 6 (lower is better)
Translates to: WCNQDPAVFLGN*PQQLKERRFKA
Trigger: TGCTTTGAATCGCCTCTCCTTCAGTTGCTGAGGTCAATTCCCTAGGAAAACAGCAGGATCTTGATTGCACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398824.6