RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CAPN13 (Homo sapiens)

Ensembl gene IDs: ENSG00000162949

Ensembl transcript IDs: ENST00000295055.12, ENST00000450650.5, ENST00000458085.6, ENST00000465450.2, ENST00000465960.2, ENST00000485248.2, ENST00000490786.1

Found 482 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTCCCCCGGATGACACTGGGTGGGGCGCCACGTCTCTACCGAGCTTaGCAGCCACAGCAGTTCTGGAGACGATCCAGGAAGAGAGGCAGG +
Preference number: 1 (lower is better)
Translates to: VPRMTLGGAPRLYRA*QPQQFWRRSRKRGR
Trigger: CCTGCCTCTCTTCCTGGATCGTCTCCAGAACTGCTGTGGCTGCCAAGCTCGGTAGAGACGTGGCGCCCCACCCAGTGTCATCCGGGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458085.6
3UTR TCA 90 bp GCGTGCAAGGTGCAGAGGGGCTGCCATCCCCGGGCCGTGGCACTGTaGGGACCATTTGGATTCCTCTGTGGGAGATGGGCTGTGTCTCTG +
Preference number: 1 (lower is better)
Translates to: ACKVQRGCHPRAVAL*GPFGFLCGRWAVSL
Trigger: CAGAGACACAGCCCATCTCCCACAGAGGAATCCAAATGGTCCTCACAGTGCCACGGCCCGGGGATGGCAGCCCCTCTGCACCTTGCACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450650.5
3UTR GCA 90 bp TCACAGTCCCAATTCAGCCTTGTCAACGGTGCAGGAGCGGGGCAATaGGTCTCAGGAGACAGCACACTGCCGAGTGAGGGGCTGGCAGGG +
Preference number: 1 (lower is better)
Translates to: SQSQFSLVNGAGAGQ*VSGDSTLPSEGLAG
Trigger: CCCTGCCAGCCCCTCACTCGGCAGTGTGCTGTCTCCTGAGACGCATTGCCCCGCTCCTGCACCGTTGACAAGGCTGAATTGGGACTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450650.5
3UTR GCA 90 bp GCAGGGCAGCATCTGGGGGTCTACACTCATGGAGTCAGCCTCTTCTaGTTGCCAAGCCAGGGGTACGCAGGAAGAGGATGGCTCACTGGG +
Preference number: 1 (lower is better)
Translates to: AGQHLGVYTHGVSLF*LPSQGYAGRGWLTG
Trigger: CCCAGTGAGCCATCCTCTTCCTGCGTACCCCTGGCTTGGCAAGCAGAAGAGGCTGACTCCATGAGTGTAGACCCCCAGATGCTGCCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450650.5
3UTR CCA 90 bp AAGTGCTCAGATGAGCTGCTTGGTGGCCACAGGCTTAACTGGGCCTaGGCCAGCCAAGGACCGAACCCAGGCTGTTGGGAGACAGCTTGG +
Preference number: 1 (lower is better)
Translates to: KCSDELLGGHRLNWA*ASQGPNPGCWETAW
Trigger: CCAAGCTGTCTCCCAACAGCCTGGGTTCGGTCCTTGGCTGGCCCAGGCCCAGTTAAGCCTGTGGCCACCAAGCAGCTCATCTGAGCACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
3UTR GCA 90 bp CCAGGGCAACGTAGGCTGAATACATCCCAAAGTGCTCAGATGAGCTaGTTGGTGGCCACAGGCTTAACTGGGCCTGGGCCAGCCAAGGAC +
Preference number: 1 (lower is better)
Translates to: PGQRRLNTSQSAQMS*LVATGLTGPGPAKD
Trigger: GTCCTTGGCTGGCCCAGGCCCAGTTAAGCCTGTGGCCACCAAGCAGCTCATCTGAGCACTTTGGGATGTATTCAGCCTACGTTGCCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
3UTR GCA 90 bp TTCACAATGGCCGGCTTCACAGTCCCAATTCAGCCTTGTCAACGGTaGAGGAGCGGGGCAATGCGTCTCAGGAGACAGCACACTGCCGAG +
Preference number: 1 (lower is better)
Translates to: FTMAGFTVPIQPCQR*RSGAMRLRRQHTAE
Trigger: CTCGGCAGTGTGCTGTCTCCTGAGACGCATTGCCCCGCTCCTGCACCGTTGACAAGGCTGAATTGGGACTGTGAAGCCGGCCATTGTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450650.5
3UTR CCA 90 bp AAGCTGGCTAGCTCCCGGGAGGAACGATGCCAGGTTGGTGGGAGGTaGCCGAGTAGGAGAAGGAAAGGTTTCACGGGGTACTGCCAATTG +
Preference number: 1 (lower is better)
Translates to: KLASSREERCQVGGR*PSRRRKGFTGYCQL
Trigger: CAATTGGCAGTACCCCGTGAAACCTTTCCTTCTCCTACTCGGCCACCTCCCACCAACCTGGCATCGTTCCTCCCGGGAGCTAGCCAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458085.6
3UTR CCA 90 bp GTCAGCCTCTTCTGCTTGCCAAGCCAGGGGTACGCAGGAAGAGGATaGCTCACTGGGGAATGGAAATCAGGAGGAGGGTCAGGAGTCTGG +
Preference number: 1 (lower is better)
Translates to: VSLFCLPSQGYAGRG*LTGEWKSGGGSGVW
Trigger: CCAGACTCCTGACCCTCCTCCTGATTTCCATTCCCCAGTGAGCCATCCTCTTCCTGCGTACCCCTGGCTTGGCAAGCAGAAGAGGCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450650.5
3UTR GCA 90 bp AAGCTGACCCTGCCGACGCTGTCGCTGTACCTGAGGGTCACCAGATaGAGCAGCTCACGGCTGATGAAGATCCCTCTGAGGAAGTCTGTA +
Preference number: 1 (lower is better)
Translates to: KLTLPTLSLYLRVTR*SSSRLMKIPLRKSV
Trigger: TACAGACTTCCTCAGAGGGATCTTCATCAGCCGTGAGCTGCTGCATCTGGTGACCCTCAGGTACAGCGACAGCGTCGGCAGGGTCAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450650.5
3UTR GCA 90 bp TGCTGTATGTGCTTTCTGAAGCTGGCTAGCTCCCGGGAGGAACGATaGCAGGTTGGTGGGAGGTGGCCGAGTAGGAGAAGGAAAGGTTTC +
Preference number: 1 (lower is better)
Translates to: CCMCFLKLASSREER*QVGGRWPSRRRKGF
Trigger: GAAACCTTTCCTTCTCCTACTCGGCCACCTCCCACCAACCTGGCATCGTTCCTCCCGGGAGCTAGCCAGCTTCAGAAAGCACATACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458085.6
3UTR CCA 90 bp GGATGGCTCACTGGGGAATGGAAATCAGGAGGAGGGTCAGGAGTCTaGGGTTCAATTCTTGGTCCTACACTTGTAGCCACGGGCCTGGAG +
Preference number: 1 (lower is better)
Translates to: GWLTGEWKSGGGSGV*GSILGPTLVATGLE
Trigger: CTCCAGGCCCGTGGCTACAAGTGTAGGACCAAGAATTGAACCCCAGACTCCTGACCCTCCTCCTGATTTCCATTCCCCAGTGAGCCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450650.5
3UTR TCA 90 bp TGTGCACATAGGTGGTTTGGCAGCAAGGATGCTGTATGTGCTTTCTaGAGCTGGCTAGCTCCCGGGAGGAACGATGCCAGGTTGGTGGGA +
Preference number: 1 (lower is better)
Translates to: CAHRWFGSKDAVCAF*SWLAPGRNDARLVG
Trigger: TCCCACCAACCTGGCATCGTTCCTCCCGGGAGCTAGCCAGCTTCAGAAAGCACATACAGCATCCTTGCTGCCAAACCACCTATGTGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458085.6
3UTR GCA 90 bp GGAAGAGAGGCAGGTAAAATAGTCCATCAAGTCACTTCTCCTCTCTaGATCCCAGTAAGGGCCTGTGAGAGCTGTCCCTCCCTCAGGTCC +
Preference number: 1 (lower is better)
Translates to: GREAGKIVHQVTSPL*IPVRACESCPSLRS
Trigger: GGACCTGAGGGAGGGACAGCTCTCACAGGCCCTTACTGGGATGCAGAGAGGAGAAGTGACTTGATGGACTATTTTACCTGCCTCTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458085.6
3UTR TCA 90 bp CACCCGAGGGTGGTCAAAGTGGCTCATTCTGGCTCTTCCAAGAAATaGATCCAACTGGTGACAGGGGACTCAGAGACAACTTCTCTTCTC +
Preference number: 1 (lower is better)
Translates to: HPRVVKVAHSGSSKK*IQLVTGDSETTSLL
Trigger: GAGAAGAGAAGTTGTCTCTGAGTCCCCTGTCACCAGTTGGATTCATTTCTTGGAAGAGCCAGAATGAGCCACTTTGACCACCCTCGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
3UTR CCA 90 bp AAACACCCAGTGGACAGCTCTTGTGTCACCCATAGCACCCGAGGGTaGTCAAAGTGGCTCATTCTGGCTCTTCCAAGAAATGAATCCAAC +
Preference number: 1 (lower is better)
Translates to: KHPVDSSCVTHSTRG*SKWLILALPRNESN
Trigger: GTTGGATTCATTTCTTGGAAGAGCCAGAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACACAAGAGCTGTCCACTGGGTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
3UTR TCA 90 bp CTCCAATCCCACGTAAGGCCCCTGGGTGCTAGGTACCATACCTGCTaGGCATATCTGTTGAAAATGCTTTGTTGGGAGCCATGTTCTGAA +
Preference number: 1 (lower is better)
Translates to: LQSHVRPLGARYHTC*AYLLKMLCWEPCSE
Trigger: TTCAGAACATGGCTCCCAACAAAGCATTTTCAACAGATATGCTCAGCAGGTATGGTACCTAGCACCCAGGGGCCTTACGTGGGATTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458085.6
3UTR CCA 90 bp TCTGTTTCATGCAGGGCTGGTTTAGATTTATCACAACCACCATACTaGGCAGCACAGCCTCTTAGAATGAGAGCCAGATTCTTGAGTGAT +
Preference number: 1 (lower is better)
Translates to: SVSCRAGLDLSQPPY*AAQPLRMRARFLSD
Trigger: ATCACTCAAGAATCTGGCTCTCATTCTAAGAGGCTGTGCTGCCCAGTATGGTGGTTGTGATAAATCTAAACCAGCCCTGCATGAAACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
3UTR CAA 90 bp AGTCCCCCGGATGACACTGGGTGGGGCGCCACGTCTCTACCGAGCTaGGCAGCCACAGCAGTTCTGGAGACGATCCAGGAAGAGAGGCAG +
Preference number: 2 (lower is better)
Translates to: SPPDDTGWGATSLPS*AATAVLETIQEERQ
Trigger: CTGCCTCTCTTCCTGGATCGTCTCCAGAACTGCTGTGGCTGCCAAGCTCGGTAGAGACGTGGCGCCCCACCCAGTGTCATCCGGGGGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458085.6
3UTR-3UTR TCA 90 bp ATGTGCTTTCTGAAGCTGGCTAGCTCCCGGGAGGAACGATGCCAGGTTGGTGGGCCCAGTAAGGGCCTGTaGGAGCTGTCCCTCCCTCAG +
Preference number: 2 (lower is better)
Translates to: MCFLKLASSREERCQVGGPSKGL*ELSLPQ
Trigger: CTGAGGGAGGGACAGCTCTCACAGGCCCTTACTGGG...CCCACCAACCTGGCATCGTTCCTCCCGGGAGCTAGCCAGCTTCAGAAAGCACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458085.6
3UTR-3UTR TCA 90 bp GTCACCAGATGCAGCAGCTCACGGCTGATGAAGATCCCTCTGAGGAAGTCTGTACAGCACACTGCCGAGTaGGGGGCTGGCAGGGCAGCA +
Preference number: 2 (lower is better)
Translates to: VTRCSSSRLMKIPLRKSVQHTAE*GAGRAA
Trigger: TGCTGCCCTGCCAGCCCCTCACTCGGCAGTGTGCTG...TACAGACTTCCTCAGAGGGATCTTCATCAGCCGTGAGCTGCTGCATCTGGTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450650.5
3UTR-3UTR CCA 90 bp CTGGGCCAGCCAAGGACCGAACCCAGGCTGTTGGGAGACAGCTTGGACTCTGTTCCGAACCCAGGCTGTTaGGAGACAGCTTGGACTCTG +
Preference number: 2 (lower is better)
Translates to: LGQPRTEPRLLGDSLDSVPNPGC*ETAWTL
Trigger: CAGAGTCCAAGCTGTCTCCCAACAGCCTGGGTTCGG...AACAGAGTCCAAGCTGTCTCCCAACAGCCTGGGTTCGGTCCTTGGCTGGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
3UTR CAA 90 bp GGGCAACGTAGGCTGAATACATCCCAAAGTGCTCAGATGAGCTGCTaGGTGGCCACAGGCTTAACTGGGCCTGGGCCAGCCAAGGACCGA +
Preference number: 2 (lower is better)
Translates to: GQRRLNTSQSAQMSC*VATGLTGPGPAKDR
Trigger: TCGGTCCTTGGCTGGCCCAGGCCCAGTTAAGCCTGTGGCCACCAAGCAGCTCATCTGAGCACTTTGGGATGTATTCAGCCTACGTTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
3UTR-3UTR TCA 90 bp CACTGCCGAGTGAGGGGCTGGCAGGGCAGCATCTGGGGGTCTACACTCATGGAGAGCCAGATTCTTGAGTaGTCACTGGGAGCTTGTCCT +
Preference number: 2 (lower is better)
Translates to: HCRVRGWQGSIWGSTLMESQILE*SLGACP
Trigger: AGGACAAGCTCCCAGTGATCACTCAAGAATCTGGCT...CTCCATGAGTGTAGACCCCCAGATGCTGCCCTGCCAGCCCCTCACTCGGCAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450650.5
3UTR-3UTR CCA 90 bp ACAGCTCTTGTGTCACCCATAGCACCCGAGGGTGGTCAAAGTGGCTCATTCTGGGGCCACAGGCTTAACTaGGCCTGGGCCAGCCAAGGA +
Preference number: 2 (lower is better)
Translates to: TALVSPIAPEGGQSGSFWGHRLN*AWASQG
Trigger: TCCTTGGCTGGCCCAGGCCCAGTTAAGCCTGTGGCC...CCAGAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACACAAGAGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
3UTR CAA 90 bp GCCCTCTTGTTTCACAATGGCCGGCTTCACAGTCCCAATTCAGCCTaGTCAACGGTGCAGGAGCGGGGCAATGCGTCTCAGGAGACAGCA +
Preference number: 2 (lower is better)
Translates to: ALLFHNGRLHSPNSA*STVQERGNASQETA
Trigger: TGCTGTCTCCTGAGACGCATTGCCCCGCTCCTGCACCGTTGACAAGGCTGAATTGGGACTGTGAAGCCGGCCATTGTGAAACAAGAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450650.5
3UTR-3UTR TCA 90 bp TTCACAATGGCCGGCTTCACAGTCCCAATTCAGCCTTGTCAACGGTGCAGGAGCCCTGGAGTGAGTCTCTaGACTGCCTCTGCCCAGCGT +
Preference number: 2 (lower is better)
Translates to: FTMAGFTVPIQPCQRCRSPGVSL*TASAQR
Trigger: ACGCTGGGCAGAGGCAGTTCAGAGACTCACTCCAGG...GCTCCTGCACCGTTGACAAGGCTGAATTGGGACTGTGAAGCCGGCCATTGTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450650.5
3UTR-3UTR CCA 90 bp CACTGCCGAGTGAGGGGCTGGCAGGGCAGCATCTGGGGGTCTACACTCATGGAGTTCTTGAGTGATCACTaGGAGCTTGTCCTGAGCCAT +
Preference number: 2 (lower is better)
Translates to: HCRVRGWQGSIWGSTLMEFLSDH*ELVLSH
Trigger: ATGGCTCAGGACAAGCTCCCAGTGATCACTCAAGAA...CTCCATGAGTGTAGACCCCCAGATGCTGCCCTGCCAGCCCCTCACTCGGCAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450650.5
3UTR CAA 90 bp GGCCTGGGCCAGCCAAGGACCGAACCCAGGCTGTTGGGAGACAGCTaGGACTCTGTTTCATGCAGGGCTGGTTTAGATTTATCACAACCA +
Preference number: 2 (lower is better)
Translates to: GLGQPRTEPRLLGDS*DSVSCRAGLDLSQP
Trigger: TGGTTGTGATAAATCTAAACCAGCCCTGCATGAAACAGAGTCCAAGCTGTCTCCCAACAGCCTGGGTTCGGTCCTTGGCTGGCCCAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
3UTR-3UTR TCA 90 bp TCTTGTGTCACCCATAGCACCCGAGGGTGGTCAAAGTGGCTCATTCTGGCTCTTCCCAAAGTGCTCAGATaGGCTGCTTGGTGGCCACAG +
Preference number: 2 (lower is better)
Translates to: SCVTHSTRGWSKWLILALPKVLR*AAWWPQ
Trigger: CTGTGGCCACCAAGCAGCTCATCTGAGCACTTTGGG...AAGAGCCAGAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACACAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
3UTR-3UTR TCA 90 bp TCTGCAAACACCCAGTGGACAGCTCTTGTGTCACCCATAGCACCCGAGGGTGGTCAGGGCAACGTAGGCTaGATACATCCCAAAGTGCTC +
Preference number: 2 (lower is better)
Translates to: SANTQWTALVSPIAPEGGQGNVG*IHPKVL
Trigger: GAGCACTTTGGGATGTATTCAGCCTACGTTGCCCTG...ACCACCCTCGGGTGCTATGGGTGACACAAGAGCTGTCCACTGGGTGTTTGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
3UTR-3UTR CCA 90 bp GAGAGGTTGCGGAAGGTCTTTGCCATGGCTTCAAGCCGCATCAGGAAGCAGACCCATAGCACCCGAGGGTaGTCAAAGTGGCTCATTCTG +
Preference number: 2 (lower is better)
Translates to: ERLRKVFAMASSRIRKQTHSTRG*SKWLIL
Trigger: CAGAATGAGCCACTTTGACCACCCTCGGGTGCTATG...GGTCTGCTTCCTGATGCGGCTTGAAGCCATGGCAAAGACCTTCCGCAACCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450650.5
3UTR-3UTR GCA 90 bp TGTGTCACCCATAGCACCCGAGGGTGGTCAAAGTGGCTCATTCTGGCTCTTCCAAGTGCTCAGATGAGCTaGTTGGTGGCCACAGGCTTA +
Preference number: 2 (lower is better)
Translates to: CVTHSTRGWSKWLILALPSAQMS*LVATGL
Trigger: TAAGCCTGTGGCCACCAAGCAGCTCATCTGAGCACT...TGGAAGAGCCAGAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
3UTR-3UTR GCA 90 bp GTCTCCCGCTGTGAATGCAGCATAGCAATGCTGGGGTGCAACTGCTGTGTAGACAGTGCTCAGATGAGCTaGTTGGTGGCCACAGGCTTA +
Preference number: 2 (lower is better)
Translates to: VSRCECSIAMLGCNCCVDSAQMS*LVATGL
Trigger: TAAGCCTGTGGCCACCAAGCAGCTCATCTGAGCACT...GTCTACACAGCAGTTGCACCCCAGCATTGCTATGCTGCATTCACAGCGGGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450650.5
3UTR-3UTR GCA 90 bp TGGACAGCTCTTGTGTCACCCATAGCACCCGAGGGTGGTCAAAGTGGCTCATTCCAGGGAGACATCTCCTaGTTCCTTTTCCAGGGCAAC +
Preference number: 2 (lower is better)
Translates to: WTALVSPIAPEGGQSGSFQGDIS*FLFQGN
Trigger: GTTGCCCTGGAAAAGGAAGCAGGAGATGTCTCCCTG...GAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACACAAGAGCTGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
3UTR-3UTR GCA 90 bp TGTGTCACCCATAGCACCCGAGGGTGGTCAAAGTGGCTCATTCTGGCTCTTCCACAGGGAGACATCTCCTaGTTCCTTTTCCAGGGCAAC +
Preference number: 2 (lower is better)
Translates to: CVTHSTRGWSKWLILALPQGDIS*FLFQGN
Trigger: GTTGCCCTGGAAAAGGAAGCAGGAGATGTCTCCCTG...TGGAAGAGCCAGAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
3UTR-3UTR CCA 90 bp TGGACAGCTCTTGTGTCACCCATAGCACCCGAGGGTGGTCAAAGTGGCTCATTCGCTTGTCCTGAGCCATaGGTCTGCTTTCCTCTTTGC +
Preference number: 2 (lower is better)
Translates to: WTALVSPIAPEGGQSGSFACPEP*VCFPLC
Trigger: GCAAAGAGGAAAGCAGACCCATGGCTCAGGACAAGC...GAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACACAAGAGCTGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
3UTR-3UTR CCA 90 bp GCAAACACCCAGTGGACAGCTCTTGTGTCACCCATAGCACCCGAGGGTGGTCAATCACAACCACCATACTaGGCAGCACAGCCTCTTAGA +
Preference number: 2 (lower is better)
Translates to: ANTQWTALVSPIAPEGGQSQPPY*AAQPLR
Trigger: TCTAAGAGGCTGTGCTGCCCAGTATGGTGGTTGTGA...TTGACCACCCTCGGGTGCTATGGGTGACACAAGAGCTGTCCACTGGGTGTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
3UTR-3UTR CCA 90 bp GCAAACACCCAGTGGACAGCTCTTGTGTCACCCATAGCACCCGAGGGTGGTCAATGTTGGGAGACAGCTTaGACTCTGTTTCATGCAGGG +
Preference number: 2 (lower is better)
Translates to: ANTQWTALVSPIAPEGGQCWETA*TLFHAG
Trigger: CCCTGCATGAAACAGAGTCCAAGCTGTCTCCCAACA...TTGACCACCCTCGGGTGCTATGGGTGACACAAGAGCTGTCCACTGGGTGTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
3UTR-3UTR CCA 90 bp CTGCTTCCTTTTCCAGGGCAACGTAGGCTGAATACATCCCAAAGTGCTCAGATGAGGCTTAACTGGGCCTaGGCCAGCCAAGGACCGAAC +
Preference number: 2 (lower is better)
Translates to: LLPFPGQRRLNTSQSAQMRLNWA*ASQGPN
Trigger: GTTCGGTCCTTGGCTGGCCCAGGCCCAGTTAAGCCT...CATCTGAGCACTTTGGGATGTATTCAGCCTACGTTGCCCTGGAAAAGGAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
3UTR-3UTR CCA 90 bp GTCCCCTTTCTCCAATCCCACGTAAGGCCCCTGGGTGCTAGGTACCATACCTGCATTCTGAGGTTGAAATaGCTGCTCAGGTGCCTGTCA +
Preference number: 2 (lower is better)
Translates to: VPFLQSHVRPLGARYHTCILRLK*LLRCLS
Trigger: TGACAGGCACCTGAGCAGCCATTTCAACCTCAGAAT...GCAGGTATGGTACCTAGCACCCAGGGGCCTTACGTGGGATTGGAGAAAGGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458085.6
3UTR-3UTR CCA 90 bp TTAACGGTAAGAGGCTCATTGTGCAGAGCCCCTGGCAGCTATTTTATTCTGACACCGGATGACACTGGGTaGGGCGCCACGTCTCTACCG +
Preference number: 2 (lower is better)
Translates to: LTVRGSLCRAPGSYFILTPDDTG*GATSLP
Trigger: CGGTAGAGACGTGGCGCCCCACCCAGTGTCATCCGG...TGTCAGAATAAAATAGCTGCCAGGGGCTCTGCACAATGAGCCTCTTACCGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458085.6
3UTR-3UTR CCA 90 bp GGATTCCTCTGTGGGAGATGGGCTGTGTCTCTGATAGATTCCAAAGCACAGCCATGGCAGGGCAGCATCTaGGGGTCTACACTCATGGAG +
Preference number: 2 (lower is better)
Translates to: GFLCGRWAVSLIDSKAQPWQGSI*GSTLME
Trigger: CTCCATGAGTGTAGACCCCCAGATGCTGCCCTGCCA...TGGCTGTGCTTTGGAATCTATCAGAGACACAGCCCATCTCCCACAGAGGAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450650.5
3UTR-3UTR CCA 90 bp TGGACAGCTCTTGTGTCACCCATAGCACCCGAGGGTGGTCAAAGTGGCTCATTCGGAAGGTCTTTGCCATaGCTTCAAGCCGCATCAGGA +
Preference number: 2 (lower is better)
Translates to: WTALVSPIAPEGGQSGSFGRSLP*LQAASG
Trigger: TCCTGATGCGGCTTGAAGCCATGGCAAAGACCTTCC...GAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACACAAGAGCTGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450650.5
3UTR CAA 90 bp CCACCATACTGGGCAGCACAGCCTCTTAGAATGAGAGCCAGATTCTaGAGTGATCACTGGGAGCTTGTCCTGAGCCATGGGTCTGCTTTC +
Preference number: 2 (lower is better)
Translates to: PPYWAAQPLRMRARF*SDHWELVLSHGSAF
Trigger: GAAAGCAGACCCATGGCTCAGGACAAGCTCCCAGTGATCACTCAAGAATCTGGCTCTCATTCTAAGAGGCTGTGCTGCCCAGTATGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
3UTR CAA 90 bp TCTCTATGGCCTTCCACAAGTCCGAGCTCAGGAGGACTCCAGGGCTaGTCTGAACCTTCTGGAAAACATGCTGGTAGTGAACAAGGCGCT +
Preference number: 2 (lower is better)
Translates to: SLWPSTSPSSGGLQG*SEPSGKHAGSEQGA
Trigger: AGCGCCTTGTTCACTACCAGCATGTTTTCCAGAAGGTTCAGACAAGCCCTGGAGTCCTCCTGAGCTCGGACTTGTGGAAGGCCATAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450650.5
3UTR-3UTR TCA 90 bp CAGCCTCTTAGAATGAGAGCCAGATTCTTGAGTGATCACTGGGAGCTTGTCCTGCCCAAAGTGCTCAGATaGGCTGCTTGGTGGCCACAG +
Preference number: 2 (lower is better)
Translates to: QPLRMRARFLSDHWELVLPKVLR*AAWWPQ
Trigger: CTGTGGCCACCAAGCAGCTCATCTGAGCACTTTGGG...CAGGACAAGCTCCCAGTGATCACTCAAGAATCTGGCTCTCATTCTAAGAGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
3UTR-3UTR TCA 90 bp ATGTGCTTTCTGAAGCTGGCTAGCTCCCGGGAGGAACGATGCCAGGTTGGTGGGGCTGAGCATATCTGTTaGAAATGCTTTGTTGGGAGC +
Preference number: 2 (lower is better)
Translates to: MCFLKLASSREERCQVGGAEHIC*KCFVGS
Trigger: GCTCCCAACAAAGCATTTTCAACAGATATGCTCAGC...CCCACCAACCTGGCATCGTTCCTCCCGGGAGCTAGCCAGCTTCAGAAAGCACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458085.6
3UTR-3UTR CCA 90 bp CTTGTCCTGAGCCATGGGTCTGCTTTCCTCTTTGCTTCAGTTGTACATGACCAGCCGAACCCAGGCTGTTaGGAGACAGCTTGGACTCTG +
Preference number: 2 (lower is better)
Translates to: LVLSHGSAFLFASVVHDQPNPGC*ETAWTL
Trigger: CAGAGTCCAAGCTGTCTCCCAACAGCCTGGGTTCGG...CTGGTCATGTACAACTGAAGCAAAGAGGAAAGCAGACCCATGGCTCAGGACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450650.5
3UTR-3UTR CCA 90 bp GAGAGGTTGCGGAAGGTCTTTGCCATGGCTTCAAGCCGCATCAGGAAGCAGACCATTTGGATTCCTCTGTaGGAGATGGGCTGTGTCTCT +
Preference number: 2 (lower is better)
Translates to: ERLRKVFAMASSRIRKQTIWIPL*EMGCVS
Trigger: AGAGACACAGCCCATCTCCCACAGAGGAATCCAAAT...GGTCTGCTTCCTGATGCGGCTTGAAGCCATGGCAAAGACCTTCCGCAACCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450650.5
3UTR-3UTR TCA 90 bp GTGTCACCCATAGCACCCGAGGGTGGTCAAAGTGGCTCATTCTGGCTCTTCCAAAATGAATCCAACTGGTaGCAGGGGACTCAGAGACAA +
Preference number: 2 (lower is better)
Translates to: VSPIAPEGGQSGSFWLFQNESNW*QGTQRQ
Trigger: TTGTCTCTGAGTCCCCTGTCACCAGTTGGATTCATT...TTGGAAGAGCCAGAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
3UTR-3UTR CCA 90 bp GGAAAACATGCTGGTAGTGAACAAGGCGCTTCCACAGTCGCGCAAACTCCTCTTTCTGCAAACACCCAGTaGACAGCTCTTGTGTCACCC +
Preference number: 2 (lower is better)
Translates to: GKHAGSEQGASTVAQTPLSANTQ*TALVSP
Trigger: GGGTGACACAAGAGCTGTCCACTGGGTGTTTGCAGA...AAGAGGAGTTTGCGCGACTGTGGAAGCGCCTTGTTCACTACCAGCATGTTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450650.5
3UTR-3UTR GCA 90 bp ATGTGCTTTCTGAAGCTGGCTAGCTCCCGGGAGGAACGATGCCAGGTTGGTGGGCGGGGTACTGCCAATTaGTTGTTTAAAGATTTAGAG +
Preference number: 2 (lower is better)
Translates to: MCFLKLASSREERCQVGGRGTAN*LFKDLE
Trigger: CTCTAAATCTTTAAACAAGCAATTGGCAGTACCCCG...CCCACCAACCTGGCATCGTTCCTCCCGGGAGCTAGCCAGCTTCAGAAAGCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458085.6
3UTR-3UTR GCA 90 bp ATTCCTCTGTGGGAGATGGGCTGTGTCTCTGATAGATTCCAAAGCACAGCCAGCATAGCAATGCTGGGGTaGAACTGCTGTGTAGACCAG +
Preference number: 2 (lower is better)
Translates to: IPLWEMGCVSDRFQSTASIAMLG*NCCVDQ
Trigger: CTGGTCTACACAGCAGTTGCACCCCAGCATTGCTAT...GCTGGCTGTGCTTTGGAATCTATCAGAGACACAGCCCATCTCCCACAGAGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450650.5
3UTR-3UTR TCA 90 bp CAGCCTCTTAGAATGAGAGCCAGATTCTTGAGTGATCACTGGGAGCTTGTCCTGAGCCAGATTCTTGAGTaGTCACTGGGAGCTTGTCCT +
Preference number: 2 (lower is better)
Translates to: QPLRMRARFLSDHWELVLSQILE*SLGACP
Trigger: AGGACAAGCTCCCAGTGATCACTCAAGAATCTGGCT...CAGGACAAGCTCCCAGTGATCACTCAAGAATCTGGCTCTCATTCTAAGAGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
3UTR-3UTR TCA 90 bp GATCCAGGAAGAGAGGCAGGTAAAATAGTCCATCAAGTCACTTCTCCTCTCTGCGAGCAAGAACTCCGCTaGTTTTCTCCGTGTCTGTGC +
Preference number: 2 (lower is better)
Translates to: DPGREAGKIVHQVTSPLCEQELR*FSPCLC
Trigger: GCACAGACACGGAGAAAATCAGCGGAGTTCTTGCTC...GCAGAGAGGAGAAGTGACTTGATGGACTATTTTACCTGCCTCTCTTCCTGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458085.6
3UTR-3UTR CCA 90 bp CCACCATACTGGGCAGCACAGCCTCTTAGAATGAGAGCCAGATTCTTGAGTGATTCACAACCACCATACTaGGCAGCACAGCCTCTTAGA +
Preference number: 2 (lower is better)
Translates to: PPYWAAQPLRMRARFLSDSQPPY*AAQPLR
Trigger: TCTAAGAGGCTGTGCTGCCCAGTATGGTGGTTGTGA...ATCACTCAAGAATCTGGCTCTCATTCTAAGAGGCTGTGCTGCCCAGTATGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
3UTR-3UTR CCA 90 bp AAAAAGCCCTCTTGTTTCACAATGGCCGGCTTCACAGTCCCAATTCAGCCTTGTGGGGGTCTACACTCATaGAGTCAGCCTCTTCTGCTT +
Preference number: 2 (lower is better)
Translates to: KKPSCFTMAGFTVPIQPCGGLHS*SQPLLL
Trigger: AAGCAGAAGAGGCTGACTCCATGAGTGTAGACCCCC...ACAAGGCTGAATTGGGACTGTGAAGCCGGCCATTGTGAAACAAGAGGGCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000450650.5
3UTR-3UTR GCA 90 bp TTCACAATGGCCGGCTTCACAGTCCCAATTCAGCCTTGTCAACGGTGCAGGAGCTTGGACTCTGTTTCATaGAGGGCTGGTTTAGATTTA +
Preference number: 2 (lower is better)
Translates to: FTMAGFTVPIQPCQRCRSLDSVS*RAGLDL
Trigger: TAAATCTAAACCAGCCCTGCATGAAACAGAGTCCAA...GCTCCTGCACCGTTGACAAGGCTGAATTGGGACTGTGAAGCCGGCCATTGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450650.5
3UTR-3UTR GCA 90 bp GGAAAACATGCTGGTAGTGAACAAGGCGCTTCCACAGTCGCGCAAACTCCTCTTGAATACATCCCAAAGTaGTCAGATGAGCTGCTTGGT +
Preference number: 2 (lower is better)
Translates to: GKHAGSEQGASTVAQTPLEYIPK*SDELLG
Trigger: ACCAAGCAGCTCATCTGAGCACTTTGGGATGTATTC...AAGAGGAGTTTGCGCGACTGTGGAAGCGCCTTGTTCACTACCAGCATGTTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450650.5
3UTR-3UTR GCA 90 bp GATCCAGGAAGAGAGGCAGGTAAAATAGTCCATCAAGTCACTTCTCCTCTCTGCAAATGGCTGCTCAGGTaGCTGTCACTGTCTGGCATT +
Preference number: 2 (lower is better)
Translates to: DPGREAGKIVHQVTSPLCKWLLR*LSLSGI
Trigger: AATGCCAGACAGTGACAGGCACCTGAGCAGCCATTT...GCAGAGAGGAGAAGTGACTTGATGGACTATTTTACCTGCCTCTCTTCCTGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458085.6
3UTR-3UTR CCA 90 bp CAGCCTCTTAGAATGAGAGCCAGATTCTTGAGTGATCACTGGGAGCTTGTCCTGTTCTTGAGTGATCACTaGGAGCTTGTCCTGAGCCAT +
Preference number: 2 (lower is better)
Translates to: QPLRMRARFLSDHWELVLFLSDH*ELVLSH
Trigger: ATGGCTCAGGACAAGCTCCCAGTGATCACTCAAGAA...CAGGACAAGCTCCCAGTGATCACTCAAGAATCTGGCTCTCATTCTAAGAGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
3UTR-3UTR CCA 90 bp GTCTCCCGCTGTGAATGCAGCATAGCAATGCTGGGGTGCAACTGCTGTGTAGACTGTTTCATGCAGGGCTaGTTTAGATTTATCACAACC +
Preference number: 2 (lower is better)
Translates to: VSRCECSIAMLGCNCCVDCFMQG*FRFITT
Trigger: GGTTGTGATAAATCTAAACCAGCCCTGCATGAAACA...GTCTACACAGCAGTTGCACCCCAGCATTGCTATGCTGCATTCACAGCGGGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450650.5
3UTR-3UTR CCA 90 bp TTAGATTTATCACAACCACCATACTGGGCAGCACAGCCTCTTAGAATGAGAGCCCGAGGGTGGTCAAAGTaGCTCATTCTGGCTCTTCCA +
Preference number: 2 (lower is better)
Translates to: LDLSQPPYWAAQPLRMRARGWSK*LILALP
Trigger: TGGAAGAGCCAGAATGAGCCACTTTGACCACCCTCG...GGCTCTCATTCTAAGAGGCTGTGCTGCCCAGTATGGTGGTTGTGATAAATCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
3UTR-3UTR CCA 90 bp ATGCAGGGCTGGTTTAGATTTATCACAACCACCATACTGGGCAGCACAGCCTCTACTGTGAGGACCATTTaGATTCCTCTGTGGGAGATG +
Preference number: 2 (lower is better)
Translates to: MQGWFRFITTTILGSTASTVRTI*IPLWEM
Trigger: CATCTCCCACAGAGGAATCCAAATGGTCCTCACAGT...AGAGGCTGTGCTGCCCAGTATGGTGGTTGTGATAAATCTAAACCAGCCCTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450650.5
3UTR-3UTR GCA 90 bp TCTTGTGTCACCCATAGCACCCGAGGGTGGTCAAAGTGGCTCATTCTGGCTCTTTTGGACTCTGTTTCATaGAGGGCTGGTTTAGATTTA +
Preference number: 2 (lower is better)
Translates to: SCVTHSTRGWSKWLILALLDSVS*RAGLDL
Trigger: TAAATCTAAACCAGCCCTGCATGAAACAGAGTCCAA...AAGAGCCAGAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACACAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
3UTR-3UTR GCA 90 bp AGGTGGCCGAGTAGGAGAAGGAAAGGTTTCACGGGGTACTGCCAATTGCTTGTTAGATTTAGAGGGCAATaGACCTCACACCCCATAATT +
Preference number: 2 (lower is better)
Translates to: RWPSRRRKGFTGYCQLLVRFRGQ*TSHPII
Trigger: AATTATGGGGTGTGAGGTGCATTGCCCTCTAAATCT...AACAAGCAATTGGCAGTACCCCGTGAAACCTTTCCTTCTCCTACTCGGCCACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458085.6
3UTR-3UTR CCA 90 bp GGCCGAGTAGGAGAAGGAAAGGTTTCACGGGGTACTGCCAATTGCTTGTTTAAAGTGCCTGTCACTGTCTaGCATTTTCAGGAAGATTCG +
Preference number: 2 (lower is better)
Translates to: GRVGEGKVSRGTANCLFKVPVTV*HFQEDS
Trigger: CGAATCTTCCTGAAAATGCCAGACAGTGACAGGCAC...TTTAAACAAGCAATTGGCAGTACCCCGTGAAACCTTTCCTTCTCCTACTCGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458085.6
3UTR-3UTR GCA 90 bp GGCCGAGTAGGAGAAGGAAAGGTTTCACGGGGTACTGCCAATTGCTTGTTTAAATTTTCTCCGTGTCTGTaGAACCACAACATAGTTCCC +
Preference number: 2 (lower is better)
Translates to: GRVGEGKVSRGTANCLFKFSPCL*NHNIVP
Trigger: GGGAACTATGTTGTGGTTGCACAGACACGGAGAAAA...TTTAAACAAGCAATTGGCAGTACCCCGTGAAACCTTTCCTTCTCCTACTCGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458085.6
3UTR-3UTR CCA 90 bp CCACCATACTGGGCAGCACAGCCTCTTAGAATGAGAGCCAGATTCTTGAGTGATTGTTTCATGCAGGGCTaGTTTAGATTTATCACAACC +
Preference number: 2 (lower is better)
Translates to: PPYWAAQPLRMRARFLSDCFMQG*FRFITT
Trigger: GGTTGTGATAAATCTAAACCAGCCCTGCATGAAACA...ATCACTCAAGAATCTGGCTCTCATTCTAAGAGGCTGTGCTGCCCAGTATGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
3UTR-3UTR GCA 90 bp CTTGTCCTGAGCCATGGGTCTGCTTTCCTCTTTGCTTCAGTTGTACATGACCAGTCAGCACATAGTAGGTaGTTGATAGATGGTAACTAT +
Preference number: 2 (lower is better)
Translates to: LVLSHGSAFLFASVVHDQSAHSR*LIDGNY
Trigger: ATAGTTACCATCTATCAAGCACCTACTATGTGCTGA...CTGGTCATGTACAACTGAAGCAAAGAGGAAAGCAGACCCATGGCTCAGGACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450650.5
3UTR-3UTR GCA 90 bp ATGCAGGGCTGGTTTAGATTTATCACAACCACCATACTGGGCAGCACAGCCTCTTTGTATCAGAGGGATTaGTTCAAGAATTATAAGGAC +
Preference number: 2 (lower is better)
Translates to: MQGWFRFITTTILGSTASLYQRD*FKNYKD
Trigger: GTCCTTATAATTCTTGAAGCAATCCCTCTGATACAA...AGAGGCTGTGCTGCCCAGTATGGTGGTTGTGATAAATCTAAACCAGCCCTGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450650.5
3UTR TCA 72 bp GTGCAGAGGGGCTGCCATCCCCGGGCCGTGGCACTGTaGGGACCATTTGGATTCCTCTGTGGGAGATGGGCT +
Preference number: 3 (lower is better)
Translates to: VQRGCHPRAVAL*GPFGFLCGRWA
Trigger: AGCCCATCTCCCACAGAGGAATCCAAATGGTCCTCACAGTGCCACGGCCCGGGGATGGCAGCCCCTCTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450650.5
3UTR CCA 72 bp GATGAGCTGCTTGGTGGCCACAGGCTTAACTGGGCCTaGGCCAGCCAAGGACCGAACCCAGGCTGTTGGGAG +
Preference number: 3 (lower is better)
Translates to: DELLGGHRLNWA*ASQGPNPGCWE
Trigger: CTCCCAACAGCCTGGGTTCGGTCCTTGGCTGGCCCAGGCCCAGTTAAGCCTGTGGCCACCAAGCAGCTCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
3UTR CCA 72 bp CGTGCAAGGTGCAGAGGGGCTGCCATCCCCGGGCCGTaGCACTGTGAGGACCATTTGGATTCCTCTGTGGGA +
Preference number: 3 (lower is better)
Translates to: RARCRGAAIPGP*HCEDHLDSSVG
Trigger: TCCCACAGAGGAATCCAAATGGTCCTCACAGTGCCACGGCCCGGGGATGGCAGCCCCTCTGCACCTTGCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450650.5
3UTR-3UTR CAA 90 bp CACTGCCGAGTGAGGGGCTGGCAGGGCAGCATCTGGGGGTCTACACTCATGGAGACCGAACCCAGGCTGTaGGGAGACAGCTTGGACTCT +
Preference number: 3 (lower is better)
Translates to: HCRVRGWQGSIWGSTLMETEPRL*GDSLDS
Trigger: AGAGTCCAAGCTGTCTCCCAACAGCCTGGGTTCGGT...CTCCATGAGTGTAGACCCCCAGATGCTGCCCTGCCAGCCCCTCACTCGGCAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450650.5
3UTR-3UTR CAA 90 bp AGTCCCCCGGATGACACTGGGTGGGGCGCCACGTCTCTACCGAGCTTGGCAGCCCCCTTCATTCTGAGGTaGAAATGGCTGCTCAGGTGC +
Preference number: 3 (lower is better)
Translates to: SPPDDTGWGATSLPSLAAPFILR*KWLLRC
Trigger: GCACCTGAGCAGCCATTTCAACCTCAGAATGAAGGG...GGCTGCCAAGCTCGGTAGAGACGTGGCGCCCCACCCAGTGTCATCCGGGGGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000458085.6
3UTR CCA 72 bp GCACACTGCCGAGTGAGGGGCTGGCAGGGCAGCATCTaGGGGTCTACACTCATGGAGTCAGCCTCTTCTGCT +
Preference number: 3 (lower is better)
Translates to: AHCRVRGWQGSI*GSTLMESASSA
Trigger: AGCAGAAGAGGCTGACTCCATGAGTGTAGACCCCCAGATGCTGCCCTGCCAGCCCCTCACTCGGCAGTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450650.5
3UTR GCA 72 bp CAATTCAGCCTTGTCAACGGTGCAGGAGCGGGGCAATaGGTCTCAGGAGACAGCACACTGCCGAGTGAGGGG +
Preference number: 3 (lower is better)
Translates to: QFSLVNGAGAGQ*VSGDSTLPSEG
Trigger: CCCCTCACTCGGCAGTGTGCTGTCTCCTGAGACGCATTGCCCCGCTCCTGCACCGTTGACAAGGCTGAATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450650.5
3UTR GCA 72 bp GCCGGCTTCACAGTCCCAATTCAGCCTTGTCAACGGTaGAGGAGCGGGGCAATGCGTCTCAGGAGACAGCAC +
Preference number: 3 (lower is better)
Translates to: AGFTVPIQPCQR*RSGAMRLRRQH
Trigger: GTGCTGTCTCCTGAGACGCATTGCCCCGCTCCTGCACCGTTGACAAGGCTGAATTGGGACTGTGAAGCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450650.5
3UTR CCA 72 bp ATGACACTGGGTGGGGCGCCACGTCTCTACCGAGCTTaGCAGCCACAGCAGTTCTGGAGACGATCCAGGAAG +
Preference number: 3 (lower is better)
Translates to: MTLGGAPRLYRA*QPQQFWRRSRK
Trigger: CTTCCTGGATCGTCTCCAGAACTGCTGTGGCTGCCAAGCTCGGTAGAGACGTGGCGCCCCACCCAGTGTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458085.6
3UTR CCA 72 bp AGCTCCCGGGAGGAACGATGCCAGGTTGGTGGGAGGTaGCCGAGTAGGAGAAGGAAAGGTTTCACGGGGTAC +
Preference number: 3 (lower is better)
Translates to: SSREERCQVGGR*PSRRRKGFTGY
Trigger: GTACCCCGTGAAACCTTTCCTTCTCCTACTCGGCCACCTCCCACCAACCTGGCATCGTTCCTCCCGGGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458085.6
3UTR TCA 72 bp ATTCTTGGTCCTACACTTGTAGCCACGGGCCTGGAGTaGGTCTCTGAACTGCCTCTGCCCAGCGTCTCCCGC +
Preference number: 3 (lower is better)
Translates to: ILGPTLVATGLE*VSELPLPSVSR
Trigger: GCGGGAGACGCTGGGCAGAGGCAGTTCAGAGACTCACTCCAGGCCCGTGGCTACAAGTGTAGGACCAAGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450650.5
3UTR GCA 72 bp TGGGGGTCTACACTCATGGAGTCAGCCTCTTCTGCTTaGCAAGCCAGGGGTACGCAGGAAGAGGATGGCTCA +
Preference number: 3 (lower is better)
Translates to: WGSTLMESASSA*QARGTQEEDGS
Trigger: TGAGCCATCCTCTTCCTGCGTACCCCTGGCTTGGCAAGCAGAAGAGGCTGACTCCATGAGTGTAGACCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450650.5
3UTR TCA 72 bp AGGTGGTTTGGCAGCAAGGATGCTGTATGTGCTTTCTaGAGCTGGCTAGCTCCCGGGAGGAACGATGCCAGG +
Preference number: 3 (lower is better)
Translates to: RWFGSKDAVCAF*SWLAPGRNDAR
Trigger: CCTGGCATCGTTCCTCCCGGGAGCTAGCCAGCTTCAGAAAGCACATACAGCATCCTTGCTGCCAAACCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458085.6
3UTR GCA 72 bp TCTGAACTGCCTCTGCCCAGCGTCTCCCGCTGTGAATaGAGCATAGCAATGCTGGGGTGCAACTGCTGTGTA +
Preference number: 3 (lower is better)
Translates to: SELPLPSVSRCE*SIAMLGCNCCV
Trigger: TACACAGCAGTTGCACCCCAGCATTGCTATGCTGCATTCACAGCGGGAGACGCTGGGCAGAGGCAGTTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450650.5
3UTR CCA 72 bp GCCTTCTCCAGCAGGCAGGGCCAGAACTCTTGGTTTTaGTGGCGAGGACGCACAAAGAGGCATTTATCTCCC +
Preference number: 3 (lower is better)
Translates to: AFSSRQGQNSWF*WRGRTKRHLSP
Trigger: GGGAGATAAATGCCTCTTTGTGCGTCCTCGCCACCAAAACCAAGAGTTCTGGCCCTGCCTGCTGGAGAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485248.2
3UTR-3UTR CAA 90 bp GCTCTTGTGTCACCCATAGCACCCGAGGGTGGTCAAAGTGGCTCATTCTGGCTCCTGTTGGGAGACAGCTaGGACTCTGTTTCATGCAGG +
Preference number: 3 (lower is better)
Translates to: ALVSPIAPEGGQSGSFWLLLGDS*DSVSCR
Trigger: CCTGCATGAAACAGAGTCCAAGCTGTCTCCCAACAG...GAGCCAGAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACACAAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
3UTR CCA 72 bp TTCTCCAGCAGGCAGGGCCAGAACTCTTGGTTTTGGTaGCGAGGACGCACAAAGAGGCATTTATCTCCCTGG +
Preference number: 3 (lower is better)
Translates to: FSSRQGQNSWFW*RGRTKRHLSPW
Trigger: CCAGGGAGATAAATGCCTCTTTGTGCGTCCTCGCCACCAAAACCAAGAGTTCTGGCCCTGCCTGCTGGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485248.2
3UTR-3UTR CAA 90 bp AGGCTGAATACATCCCAAAGTGCTCAGATGAGCTGCTTGGTGGCCACAGGCTTAACCGAACCCAGGCTGTaGGGAGACAGCTTGGACTCT +
Preference number: 3 (lower is better)
Translates to: RLNTSQSAQMSCLVATGLTEPRL*GDSLDS
Trigger: AGAGTCCAAGCTGTCTCCCAACAGCCTGGGTTCGGT...TAAGCCTGTGGCCACCAAGCAGCTCATCTGAGCACTTTGGGATGTATTCAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
3UTR-3UTR CAA 90 bp GGATTCCTCTGTGGGAGATGGGCTGTGTCTCTGATAGATTCCAAAGCACAGCCAAGTCCCAATTCAGCCTaGTCAACGGTGCAGGAGCGG +
Preference number: 3 (lower is better)
Translates to: GFLCGRWAVSLIDSKAQPSPNSA*STVQER
Trigger: CCGCTCCTGCACCGTTGACAAGGCTGAATTGGGACT...TGGCTGTGCTTTGGAATCTATCAGAGACACAGCCCATCTCCCACAGAGGAATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450650.5
3UTR-3UTR CAA 90 bp GTCACCAGATGCAGCAGCTCACGGCTGATGAAGATCCCTCTGAGGAAGTCTGTAGGAGGACTCCAGGGCTaGTCTGAACCTTCTGGAAAA +
Preference number: 3 (lower is better)
Translates to: VTRCSSSRLMKIPLRKSVGGLQG*SEPSGK
Trigger: TTTTCCAGAAGGTTCAGACAAGCCCTGGAGTCCTCC...TACAGACTTCCTCAGAGGGATCTTCATCAGCCGTGAGCTGCTGCATCTGGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450650.5
3UTR-3UTR CAA 90 bp CATCCTCGAGGAAGCCATAGTGCAGATCGGAATAGGATCCGAGCAGCTTGGCATCCAGAACTCTTGGTTTaGGTGGCGAGGACGCACAAA +
Preference number: 3 (lower is better)
Translates to: HPRGSHSADRNRIRAAWHPELLV*VARTHK
Trigger: TTTGTGCGTCCTCGCCACCAAAACCAAGAGTTCTGG...ATGCCAAGCTGCTCGGATCCTATTCCGATCTGCACTATGGCTTCCTCGAGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485248.2
3UTR GCA 72 bp GCAGGTAAAATAGTCCATCAAGTCACTTCTCCTCTCTaGATCCCAGTAAGGGCCTGTGAGAGCTGTCCCTCC +
Preference number: 3 (lower is better)
Translates to: AGKIVHQVTSPL*IPVRACESCPS
Trigger: GGAGGGACAGCTCTCACAGGCCCTTACTGGGATGCAGAGAGGAGAAGTGACTTGATGGACTATTTTACCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458085.6
3UTR GCA 72 bp GTCTCCCGCTGTGAATGCAGCATAGCAATGCTGGGGTaGAACTGCTGTGTAGACCAGGCAGTTTTCCATGTT +
Preference number: 3 (lower is better)
Translates to: VSRCECSIAMLG*NCCVDQAVFHV
Trigger: AACATGGAAAACTGCCTGGTCTACACAGCAGTTGCACCCCAGCATTGCTATGCTGCATTCACAGCGGGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450650.5
3UTR CCA 72 bp GTGGACAGCTCTTGTGTCACCCATAGCACCCGAGGGTaGTCAAAGTGGCTCATTCTGGCTCTTCCAAGAAAT +
Preference number: 3 (lower is better)
Translates to: VDSSCVTHSTRG*SKWLILALPRN
Trigger: ATTTCTTGGAAGAGCCAGAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACACAAGAGCTGTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
3UTR CCA 72 bp ACTGGGGAATGGAAATCAGGAGGAGGGTCAGGAGTCTaGGGTTCAATTCTTGGTCCTACACTTGTAGCCACG +
Preference number: 3 (lower is better)
Translates to: TGEWKSGGGSGV*GSILGPTLVAT
Trigger: CGTGGCTACAAGTGTAGGACCAAGAATTGAACCCCAGACTCCTGACCCTCCTCCTGATTTCCATTCCCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450650.5
3UTR-3UTR CAA 90 bp TTAGATTTATCACAACCACCATACTGGGCAGCACAGCCTCTTAGAATGAGAGCCGTCAGCCTCTTCTGCTaGCCAAGCCAGGGGTACGCA +
Preference number: 3 (lower is better)
Translates to: LDLSQPPYWAAQPLRMRAVSLFC*PSQGYA
Trigger: TGCGTACCCCTGGCTTGGCAAGCAGAAGAGGCTGAC...GGCTCTCATTCTAAGAGGCTGTGCTGCCCAGTATGGTGGTTGTGATAAATCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450650.5
3UTR-3UTR CAA 90 bp CTCCTGCTTCCTTTTCCAGGGCAACGTAGGCTGAATACATCCCAAAGTGCTCAGATGAGAGCCAGATTCTaGAGTGATCACTGGGAGCTT +
Preference number: 3 (lower is better)
Translates to: LLLPFPGQRRLNTSQSAQMRARF*SDHWEL
Trigger: AAGCTCCCAGTGATCACTCAAGAATCTGGCTCTCAT...CTGAGCACTTTGGGATGTATTCAGCCTACGTTGCCCTGGAAAAGGAAGCAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
3UTR-3UTR CAA 90 bp CAGCCTCTTAGAATGAGAGCCAGATTCTTGAGTGATCACTGGGAGCTTGTCCTGCACTGTGAGGACCATTaGGATTCCTCTGTGGGAGAT +
Preference number: 3 (lower is better)
Translates to: QPLRMRARFLSDHWELVLHCEDH*DSSVGD
Trigger: ATCTCCCACAGAGGAATCCAAATGGTCCTCACAGTG...CAGGACAAGCTCCCAGTGATCACTCAAGAATCTGGCTCTCATTCTAAGAGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450650.5
3UTR CCA 72 bp GTTGGGAGACAGCTTGGACTCTGTTTCATGCAGGGCTaGTTTAGATTTATCACAACCACCATACTGGGCAGC +
Preference number: 3 (lower is better)
Translates to: VGRQLGLCFMQG*FRFITTTILGS
Trigger: GCTGCCCAGTATGGTGGTTGTGATAAATCTAAACCAGCCCTGCATGAAACAGAGTCCAAGCTGTCTCCCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
3UTR CCA 72 bp TCTTGTGTCACCCATAGCACCCGAGGGTGGTCAAAGTaGCTCATTCTGGCTCTTCCAAGAAATGAATCCAAC +
Preference number: 3 (lower is better)
Translates to: SCVTHSTRGWSK*LILALPRNESN
Trigger: GTTGGATTCATTTCTTGGAAGAGCCAGAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACACAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
3UTR CCA 72 bp TGTTCTGAAGGGCTTCCCTTCATTCTGAGGTTGAAATaGCTGCTCAGGTGCCTGTCACTGTCTGGCATTTTC +
Preference number: 3 (lower is better)
Translates to: CSEGLPFILRLK*LLRCLSLSGIF
Trigger: GAAAATGCCAGACAGTGACAGGCACCTGAGCAGCCATTTCAACCTCAGAATGAAGGGAAGCCCTTCAGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458085.6
3UTR-3UTR CAA 90 bp ATGCAGGGCTGGTTTAGATTTATCACAACCACCATACTGGGCAGCACAGCCTCTATGAGAGCCAGATTCTaGAGTGATCACTGGGAGCTT +
Preference number: 3 (lower is better)
Translates to: MQGWFRFITTTILGSTASMRARF*SDHWEL
Trigger: AAGCTCCCAGTGATCACTCAAGAATCTGGCTCTCAT...AGAGGCTGTGCTGCCCAGTATGGTGGTTGTGATAAATCTAAACCAGCCCTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
3UTR TCA 72 bp GTGGTCAAAGTGGCTCATTCTGGCTCTTCCAAGAAATaGATCCAACTGGTGACAGGGGACTCAGAGACAACT +
Preference number: 3 (lower is better)
Translates to: VVKVAHSGSSKK*IQLVTGDSETT
Trigger: AGTTGTCTCTGAGTCCCCTGTCACCAGTTGGATTCATTTCTTGGAAGAGCCAGAATGAGCCACTTTGACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
3UTR TCA 72 bp CCATGGGTCTGCTTTCCTCTTTGCTTCAGTTGTACATaGCCAGGCTCATCCACTCCATTTCTGTCAGGTAGA +
Preference number: 3 (lower is better)
Translates to: PWVCFPLCFSCT*PGSSTPFLSGR
Trigger: TCTACCTGACAGAAATGGAGTGGATGAGCCTGGTCATGTACAACTGAAGCAAAGAGGAAAGCAGACCCATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450650.5
3UTR CCA 72 bp TGCAGGGCTGGTTTAGATTTATCACAACCACCATACTaGGCAGCACAGCCTCTTAGAATGAGAGCCAGATTC +
Preference number: 3 (lower is better)
Translates to: CRAGLDLSQPPY*AAQPLRMRARF
Trigger: GAATCTGGCTCTCATTCTAAGAGGCTGTGCTGCCCAGTATGGTGGTTGTGATAAATCTAAACCAGCCCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
3UTR-3UTR CAA 90 bp CTCATTGTGCAGAGCCCCTGGCAGCTATTTTATTCTGACAAGTCAAGGAGTTCTGTGCACATAGGTGGTTaGGCAGCAAGGATGCTGTAT +
Preference number: 3 (lower is better)
Translates to: LIVQSPWQLFYSDKSRSSVHIGG*AARMLY
Trigger: ATACAGCATCCTTGCTGCCAAACCACCTATGTGCAC...AGAACTCCTTGACTTGTCAGAATAAAATAGCTGCCAGGGGCTCTGCACAATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458085.6
3UTR CCA 72 bp AAGGGGCGGTTTAGGATAAGGTTAGAGCATCGACTTTaGAGGCTGAAAGCTCCAACTTCAAATCTGAGCATG +
Preference number: 3 (lower is better)
Translates to: KGRFRIRLEHRL*RLKAPTSNLSM
Trigger: CATGCTCAGATTTGAAGTTGGAGCTTTCAGCCTCCAAAGTCGATGCTCTAACCTTATCCTAAACCGCCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450650.5
3UTR TCA 72 bp TGGCATTTTCAGGAAGATTCGGAGCAAGAACTCCGCTaGTTTTCTCCGTGTCTGTGCAACCACAACATAGTT +
Preference number: 3 (lower is better)
Translates to: WHFQEDSEQELR*FSPCLCNHNIV
Trigger: AACTATGTTGTGGTTGCACAGACACGGAGAAAATCAGCGGAGTTCTTGCTCCGAATCTTCCTGAAAATGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458085.6
3UTR-3UTR CAA 90 bp TTAACGGTAAGAGGCTCATTGTGCAGAGCCCCTGGCAGCTATTTTATTCTGACAGGTACTGCCAATTGCTaGTTTAAAGATTTAGAGGGC +
Preference number: 3 (lower is better)
Translates to: LTVRGSLCRAPGSYFILTGTANC*FKDLEG
Trigger: GCCCTCTAAATCTTTAAACAAGCAATTGGCAGTACC...TGTCAGAATAAAATAGCTGCCAGGGGCTCTGCACAATGAGCCTCTTACCGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR CCA 90 bp ACACTGGGTGGGGCGCCACGTCTCTACCGAGCTTGGCAGCCACAGCAGTTCTGGCCGGATGACACTGGGTaGGGCGCCACGTCTCTACCG +
Preference number: 4 (lower is better)
Translates to: TLGGAPRLYRAWQPQQFWPDDTG*GATSLP
Trigger: CGGTAGAGACGTGGCGCCCCACCCAGTGTCATCCGG...CCAGAACTGCTGTGGCTGCCAAGCTCGGTAGAGACGTGGCGCCCCACCCAGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR TCA 90 bp AGTCCCCCGGATGACACTGGGTGGGGCGCCACGTCTCTACCGAGCTTGGCAGCCGAGCAAGAACTCCGCTaGTTTTCTCCGTGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: SPPDDTGWGATSLPSLAAEQELR*FSPCLC
Trigger: GCACAGACACGGAGAAAATCAGCGGAGTTCTTGCTC...GGCTGCCAAGCTCGGTAGAGACGTGGCGCCCCACCCAGTGTCATCCGGGGGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR GCA 90 bp CAGCTTGAAGTCCCCCGGATGACACTGGGTGGGGCGCCACGTCTCTACCGAGCTGGTCGCTGTCTTCACTaGCTTCACCAGGTCCACAGG +
Preference number: 4 (lower is better)
Translates to: QLEVPRMTLGGAPRLYRAGRCLH*LHQVHR
Trigger: CCTGTGGACCTGGTGAAGGCAGTGAAGACAGCGACC...AGCTCGGTAGAGACGTGGCGCCCCACCCAGTGTCATCCGGGGGACTTCAAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR TCA 90 bp CCTGGGCCAGCCAAGGACCGAACCCAGGCTGTTGGGAGACAGCTTGGACTCTGTCCCATGCTCAGGCAGTaGTCCCGCAAGGTGGTAAAG +
Preference number: 4 (lower is better)
Translates to: PGPAKDRTQAVGRQLGLCPMLRQ*SRKVVK
Trigger: CTTTACCACCTTGCGGGATCACTGCCTGAGCATGGG...ACAGAGTCCAAGCTGTCTCCCAACAGCCTGGGTTCGGTCCTTGGCTGGCCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR GCA 90 bp GTTGCGGAAGGTCTTTGCCATGGCTTCAAGCCGCATCAGGAAGCAGACCAGGCTAGCCAGCGTGCAAGGTaGAGAGGGGCTGCCATCCCC +
Preference number: 4 (lower is better)
Translates to: VAEGLCHGFKPHQEADQASQRAR*RGAAIP
Trigger: GGGGATGGCAGCCCCTCTGCACCTTGCACGCTGGCT...AGCCTGGTCTGCTTCCTGATGCGGCTTGAAGCCATGGCAAAGACCTTCCGCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450650.5
3UTR CAA 72 bp GATGACACTGGGTGGGGCGCCACGTCTCTACCGAGCTaGGCAGCCACAGCAGTTCTGGAGACGATCCAGGAA +
Preference number: 4 (lower is better)
Translates to: DDTGWGATSLPS*AATAVLETIQE
Trigger: TTCCTGGATCGTCTCCAGAACTGCTGTGGCTGCCAAGCTCGGTAGAGACGTGGCGCCCCACCCAGTGTCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR GCA 90 bp CGGATGACACTGGGTGGGGCGCCACGTCTCTACCGAGCTTGGCAGCCACAGCAGATTCTCCATCGCCTGTaGTGTATCTGTTGGCCCACT +
Preference number: 4 (lower is better)
Translates to: RMTLGGAPRLYRAWQPQQILHRL*CICWPT
Trigger: AGTGGGCCAACAGATACAGCACAGGCGATGGAGAAT...CTGCTGTGGCTGCCAAGCTCGGTAGAGACGTGGCGCCCCACCCAGTGTCATCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR GCA 90 bp ACACTGGGTGGGGCGCCACGTCTCTACCGAGCTTGGCAGCCACAGCAGTTCTGGGTCACTTCTCCTCTCTaGATCCCAGTAAGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: TLGGAPRLYRAWQPQQFWVTSPL*IPVRAC
Trigger: ACAGGCCCTTACTGGGATGCAGAGAGGAGAAGTGAC...CCAGAACTGCTGTGGCTGCCAAGCTCGGTAGAGACGTGGCGCCCCACCCAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR CCA 90 bp CAGCTTGAAGTCCCCCGGATGACACTGGGTGGGGCGCCACGTCTCTACCGAGCTTGGGACCATCCTTCGTaGAGTGTGTTTCCATGGTCC +
Preference number: 4 (lower is better)
Translates to: QLEVPRMTLGGAPRLYRAWDHPS*SVFPWS
Trigger: GGACCATGGAAACACACTCCACGAAGGATGGTCCCA...AGCTCGGTAGAGACGTGGCGCCCCACCCAGTGTCATCCGGGGGACTTCAAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458085.6
3UTR CAA 72 bp CTGGGGGTCTACACTCATGGAGTCAGCCTCTTCTGCTaGCCAAGCCAGGGGTACGCAGGAAGAGGATGGCTC +
Preference number: 4 (lower is better)
Translates to: LGVYTHGVSLFC*PSQGYAGRGWL
Trigger: GAGCCATCCTCTTCCTGCGTACCCCTGGCTTGGCAAGCAGAAGAGGCTGACTCCATGAGTGTAGACCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450650.5
CDS-3UTR TCA 90 bp CTGGGCCAGCCAAGGACCGAACCCAGGCTGTTGGGAGACAGCTTGGACTCTGTTTCATCCAGGATGAAGTaGGGAGGACCCCCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: LGQPRTEPRLLGDSLDSVSSRMK*GGPPGR
Trigger: TCTACCAGGGGGTCCTCCTCACTTCATCCTGGATGA...AACAGAGTCCAAGCTGTCTCCCAACAGCCTGGGTTCGGTCCTTGGCTGGCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR TCA 90 bp GCTCTTGTGTCACCCATAGCACCCGAGGGTGGTCAAAGTGGCTCATTCTGGCTCCTCCCGGAACCGCTGTaGGCCAGCCAGAATCACTTG +
Preference number: 4 (lower is better)
Translates to: ALVSPIAPEGGQSGSFWLLPEPL*ASQNHL
Trigger: CAAGTGATTCTGGCTGGCTCACAGCGGTTCCGGGAG...GAGCCAGAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACACAAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR TCA 90 bp CCTGGGCCAGCCAAGGACCGAACCCAGGCTGTTGGGAGACAGCTTGGACTCTGTGAGCAAGAACTCCGCTaGTTTTCTCCGTGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: PGPAKDRTQAVGRQLGLCEQELR*FSPCLC
Trigger: GCACAGACACGGAGAAAATCAGCGGAGTTCTTGCTC...ACAGAGTCCAAGCTGTCTCCCAACAGCCTGGGTTCGGTCCTTGGCTGGCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR TCA 90 bp GCAAACACCCAGTGGACAGCTCTTGTGTCACCCATAGCACCCGAGGGTGGTCAACGCTGTCGCTGTACCTaGGGGTCACCAGATGCAGCA +
Preference number: 4 (lower is better)
Translates to: ANTQWTALVSPIAPEGGQRCRCT*GSPDAA
Trigger: TGCTGCATCTGGTGACCCTCAGGTACAGCGACAGCG...TTGACCACCCTCGGGTGCTATGGGTGACACAAGAGCTGTCCACTGGGTGTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR GCA 90 bp CTGGGCCAGCCAAGGACCGAACCCAGGCTGTTGGGAGACAGCTTGGACTCTGTTGAACCAGCAGTCAGCTaGGCCTCCTTGTTGGATGTC +
Preference number: 4 (lower is better)
Translates to: LGQPRTEPRLLGDSLDSVEPAVS*ASLLDV
Trigger: GACATCCAACAAGGAGGCGCAGCTGACTGCTGGTTC...AACAGAGTCCAAGCTGTCTCCCAACAGCCTGGGTTCGGTCCTTGGCTGGCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR GCA 90 bp CCTGGGCCAGCCAAGGACCGAACCCAGGCTGTTGGGAGACAGCTTGGACTCTGTACCCACTGGCCACATTaGCAGAACCGGAAACGGAAA +
Preference number: 4 (lower is better)
Translates to: PGPAKDRTQAVGRQLGLCTHWPH*QNRKRK
Trigger: TTTCCGTTTCCGGTTCTGGCAATGTGGCCAGTGGGT...ACAGAGTCCAAGCTGTCTCCCAACAGCCTGGGTTCGGTCCTTGGCTGGCCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR CCA 90 bp GTCCCCTTTCTCCAATCCCACGTAAGGCCCCTGGGTGCTAGGTACCATACCTGCCAGAGGAGGAGAGCATaGCCGGCCGTCTTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: VPFLQSHVRPLGARYHTCQRRRA*PAVLEK
Trigger: TTTCTCCAAGACGGCCGGCCATGCTCTCCTCCTCTG...GCAGGTATGGTACCTAGCACCCAGGGGCCTTACGTGGGATTGGAGAAAGGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR CCA 90 bp CAGCTTGAAGTCCCCCGGATGACACTGGGTGGGGCGCCACGTCTCTACCGAGCTTCCTGGAGCAGCTTCTaGCCTATGGAAGAATCTGCT +
Preference number: 4 (lower is better)
Translates to: QLEVPRMTLGGAPRLYRASWSSF*PMEESA
Trigger: AGCAGATTCTTCCATAGGCCAGAAGCTGCTCCAGGA...AGCTCGGTAGAGACGTGGCGCCCCACCCAGTGTCATCCGGGGGACTTCAAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR CCA 90 bp GGCCTTCTCCAGCAGGCAGGGCCAGAACTCTTGGTTTTGGTGGCGAGGACGCACGAGAGGCGTTTTTCCTaGAGCAGCTTCTGGCCTATG +
Preference number: 4 (lower is better)
Translates to: GLLQQAGPELLVLVARTHERRFS*SSFWPM
Trigger: CATAGGCCAGAAGCTGCTCCAGGAAAAACGCCTCTC...GTGCGTCCTCGCCACCAAAACCAAGAGTTCTGGCCCTGCCTGCTGGAGAAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485248.2
CDS-3UTR CCA 90 bp ACACTGGGTGGGGCGCCACGTCTCTACCGAGCTTGGCAGCCACAGCAGTTCTGGAGGCATTTATCTCCCTaGACAGGTAGGCGGTCATCA +
Preference number: 4 (lower is better)
Translates to: TLGGAPRLYRAWQPQQFWRHLSP*TGRRSS
Trigger: TGATGACCGCCTACCTGTCCAGGGAGATAAATGCCT...CCAGAACTGCTGTGGCTGCCAAGCTCGGTAGAGACGTGGCGCCCCACCCAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR CCA 90 bp CCTGGGCCAGCCAAGGACCGAACCCAGGCTGTTGGGAGACAGCTTGGACTCTGTGGGGAAGAGTGCAGATaGATGTTGGTGATCACGCCT +
Preference number: 4 (lower is better)
Translates to: PGPAKDRTQAVGRQLGLCGEECR*MLVITP
Trigger: AGGCGTGATCACCAACATCCATCTGCACTCTTCCCC...ACAGAGTCCAAGCTGTCTCCCAACAGCCTGGGTTCGGTCCTTGGCTGGCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR CCA 90 bp GTTGCGGAAGGTCTTTGCCATGGCTTCAAGCCGCATCAGGAAGCAGACCAGGCTAGGCTTAACTGGGCCTaGGCCAGCCAAGGACCGAAC +
Preference number: 4 (lower is better)
Translates to: VAEGLCHGFKPHQEADQARLNWA*ASQGPN
Trigger: GTTCGGTCCTTGGCTGGCCCAGGCCCAGTTAAGCCT...AGCCTGGTCTGCTTCCTGATGCGGCTTGAAGCCATGGCAAAGACCTTCCGCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450650.5
CDS-3UTR CCA 90 bp TGTGTCACCCATAGCACCCGAGGGTGGTCAAAGTGGCTCATTCTGGCTCTTCCAGGCCACAGGCTTAACTaGGCCTGGGCCAGCCAAGGA +
Preference number: 4 (lower is better)
Translates to: CVTHSTRGWSKWLILALPGHRLN*AWASQG
Trigger: TCCTTGGCTGGCCCAGGCCCAGTTAAGCCTGTGGCC...TGGAAGAGCCAGAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR CCA 90 bp TGGACAGCTCTTGTGTCACCCATAGCACCCGAGGGTGGTCAAAGTGGCTCATTCGGCCACAGGCTTAACTaGGCCTGGGCCAGCCAAGGA +
Preference number: 4 (lower is better)
Translates to: WTALVSPIAPEGGQSGSFGHRLN*AWASQG
Trigger: TCCTTGGCTGGCCCAGGCCCAGTTAAGCCTGTGGCC...GAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACACAAGAGCTGTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR TCA 90 bp GTCCACCAGGGCATCCTCGAGGAAGCCATAGTGCAGATCGGAATAGGATCCGAGCCCATGCTCAGGCAGTaGTCCCGCAAGGTGGTAAAG +
Preference number: 4 (lower is better)
Translates to: VHQGILEEAIVQIGIGSEPMLRQ*SRKVVK
Trigger: CTTTACCACCTTGCGGGATCACTGCCTGAGCATGGG...CTCGGATCCTATTCCGATCTGCACTATGGCTTCCTCGAGGATGCCCTGGTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485248.2
CDS-3UTR TCA 90 bp GCAAACACCCAGTGGACAGCTCTTGTGTCACCCATAGCACCCGAGGGTGGTCAACCCAAAGTGCTCAGATaGGCTGCTTGGTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: ANTQWTALVSPIAPEGGQPKVLR*AAWWPQ
Trigger: CTGTGGCCACCAAGCAGCTCATCTGAGCACTTTGGG...TTGACCACCCTCGGGTGCTATGGGTGACACAAGAGCTGTCCACTGGGTGTTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR TCA 90 bp GTGTCACCCATAGCACCCGAGGGTGGTCAAAGTGGCTCATTCTGGCTCTTCCAACCTGGAGTGAGTCTCTaGACTGCCTCTGCCCAGCGT +
Preference number: 4 (lower is better)
Translates to: VSPIAPEGGQSGSFWLFQPGVSL*TASAQR
Trigger: ACGCTGGGCAGAGGCAGTTCAGAGACTCACTCCAGG...TTGGAAGAGCCAGAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450650.5
CDS-3UTR TCA 90 bp ATGGCTGCTCAGGTGCCTGTCACTGTCTGGCATTTTCAGGAAGATTCGGAGCAATTGAAGTCCCCCGGATaGCACTGGGTGGGGCGCCAC +
Preference number: 4 (lower is better)
Translates to: MAAQVPVTVWHFQEDSEQLKSPG*HWVGRH
Trigger: GTGGCGCCCCACCCAGTGTCATCCGGGGGACTTCAA...TTGCTCCGAATCTTCCTGAAAATGCCAGACAGTGACAGGCACCTGAGCAGCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR TCA 90 bp GTCCCCTTTCTCCAATCCCACGTAAGGCCCCTGGGTGCTAGGTACCATACCTGCCTCTGCATTCCAGCTTaGAGTCCCCCGGATGACACT +
Preference number: 4 (lower is better)
Translates to: VPFLQSHVRPLGARYHTCLCIPA*SPPDDT
Trigger: AGTGTCATCCGGGGGACTTCAAGCTGGAATGCAGAG...GCAGGTATGGTACCTAGCACCCAGGGGCCTTACGTGGGATTGGAGAAAGGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR GCA 90 bp ATGTGCTTTCTGAAGCTGGCTAGCTCCCGGGAGGAACGATGCCAGGTTGGTGGGAGTCAAGGATCCCAGTaGTGCCAGGAACCAGCAGTC +
Preference number: 4 (lower is better)
Translates to: MCFLKLASSREERCQVGGSQGSQ*CQEPAV
Trigger: GACTGCTGGTTCCTGGCAGCACTGGGATCCTTGACT...CCCACCAACCTGGCATCGTTCCTCCCGGGAGCTAGCCAGCTTCAGAAAGCACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR GCA 90 bp GCAAACACCCAGTGGACAGCTCTTGTGTCACCCATAGCACCCGAGGGTGGTCAAGGTCGCTGTCTTCACTaGCTTCACCAGGTCCACAGG +
Preference number: 4 (lower is better)
Translates to: ANTQWTALVSPIAPEGGQGRCLH*LHQVHR
Trigger: CCTGTGGACCTGGTGAAGGCAGTGAAGACAGCGACC...TTGACCACCCTCGGGTGCTATGGGTGACACAAGAGCTGTCCACTGGGTGTTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR GCA 90 bp GAGAGGTTGCGGAAGGTCTTTGCCATGGCTTCAAGCCGCATCAGGAAGCAGACCCTGAGGGTCACCAGATaGAGCAGCTCACGGCTGATG +
Preference number: 4 (lower is better)
Translates to: ERLRKVFAMASSRIRKQTLRVTR*SSSRLM
Trigger: CATCAGCCGTGAGCTGCTGCATCTGGTGACCCTCAG...GGTCTGCTTCCTGATGCGGCTTGAAGCCATGGCAAAGACCTTCCGCAACCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450650.5
CDS-3UTR CCA 90 bp GCAAACACCCAGTGGACAGCTCTTGTGTCACCCATAGCACCCGAGGGTGGTCAACAGAGGAGGAGAGCATaGCCGGCCGTCTTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: ANTQWTALVSPIAPEGGQQRRRA*PAVLEK
Trigger: TTTCTCCAAGACGGCCGGCCATGCTCTCCTCCTCTG...TTGACCACCCTCGGGTGCTATGGGTGACACAAGAGCTGTCCACTGGGTGTTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR CCA 90 bp GGCATCCTCGAGGAAGCCATAGTGCAGATCGGAATAGGATCCGAGCAGCTTGGCCAGAGGAGGAGAGCATaGCCGGCCGTCTTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: GILEEAIVQIGIGSEQLGQRRRA*PAVLEK
Trigger: TTTCTCCAAGACGGCCGGCCATGCTCTCCTCCTCTG...GCCAAGCTGCTCGGATCCTATTCCGATCTGCACTATGGCTTCCTCGAGGATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485248.2
CDS-3UTR CCA 90 bp ATGTGCTTTCTGAAGCTGGCTAGCTCCCGGGAGGAACGATGCCAGGTTGGTGGGCAGGTTAGAGAGTGGTaGAGGAGACTGGCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: MCFLKLASSREERCQVGGQVREW*RRLAEE
Trigger: CTCCTCTGCCAGTCTCCTCCACCACTCTCTAACCTG...CCCACCAACCTGGCATCGTTCCTCCCGGGAGCTAGCCAGCTTCAGAAAGCACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR CCA 90 bp CCTGGGCCAGCCAAGGACCGAACCCAGGCTGTTGGGAGACAGCTTGGACTCTGTAGGCATTTATCTCCCTaGACAGGTAGGCGGTCATCA +
Preference number: 4 (lower is better)
Translates to: PGPAKDRTQAVGRQLGLCRHLSP*TGRRSS
Trigger: TGATGACCGCCTACCTGTCCAGGGAGATAAATGCCT...ACAGAGTCCAAGCTGTCTCCCAACAGCCTGGGTTCGGTCCTTGGCTGGCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR CCA 90 bp GCTCTTGTGTCACCCATAGCACCCGAGGGTGGTCAAAGTGGCTCATTCTGGCTCCCGAACCCAGGCTGTTaGGAGACAGCTTGGACTCTG +
Preference number: 4 (lower is better)
Translates to: ALVSPIAPEGGQSGSFWLPNPGC*ETAWTL
Trigger: CAGAGTCCAAGCTGTCTCCCAACAGCCTGGGTTCGG...GAGCCAGAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACACAAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR CCA 90 bp TGGACAGCTCTTGTGTCACCCATAGCACCCGAGGGTGGTCAAAGTGGCTCATTCAGGCTTAACTGGGCCTaGGCCAGCCAAGGACCGAAC +
Preference number: 4 (lower is better)
Translates to: WTALVSPIAPEGGQSGSFRLNWA*ASQGPN
Trigger: GTTCGGTCCTTGGCTGGCCCAGGCCCAGTTAAGCCT...GAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACACAAGAGCTGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR CCA 90 bp GCAAACACCCAGTGGACAGCTCTTGTGTCACCCATAGCACCCGAGGGTGGTCAATGGCAGGGCAGCATCTaGGGGTCTACACTCATGGAG +
Preference number: 4 (lower is better)
Translates to: ANTQWTALVSPIAPEGGQWQGSI*GSTLME
Trigger: CTCCATGAGTGTAGACCCCCAGATGCTGCCCTGCCA...TTGACCACCCTCGGGTGCTATGGGTGACACAAGAGCTGTCCACTGGGTGTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450650.5
CDS-3UTR TCA 90 bp ACACTGGGTGGGGCGCCACGTCTCTACCGAGCTTGGCAGCCACAGCAGTTCTGGGATGGTAAGTCATGGTaGAGTTGCGGCGGAATTTAT +
Preference number: 4 (lower is better)
Translates to: TLGGAPRLYRAWQPQQFWDGKSW*SCGGIY
Trigger: ATAAATTCCGCCGCAACTTCACCATGACTTACCATC...CCAGAACTGCTGTGGCTGCCAAGCTCGGTAGAGACGTGGCGCCCCACCCAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR TCA 90 bp GCAAACACCCAGTGGACAGCTCTTGTGTCACCCATAGCACCCGAGGGTGGTCAATGGTTGAGAAGGCCCTaGAGCTGGGTGGCATCAATG +
Preference number: 4 (lower is better)
Translates to: ANTQWTALVSPIAPEGGQWLRRP*SWVASM
Trigger: CATTGATGCCACCCAGCTTCAGGGCCTTCTCAACCA...TTGACCACCCTCGGGTGCTATGGGTGACACAAGAGCTGTCCACTGGGTGTTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR TCA 90 bp TGTATGTGCTTTCTGAAGCTGGCTAGCTCCCGGGAGGAACGATGCCAGGTTGGTGCTGTATGTGCTTTCTaGAGCTGGCTAGCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: CMCFLKLASSREERCQVGAVCAF*SWLAPG
Trigger: CCCGGGAGCTAGCCAGCTTCAGAAAGCACATACAGC...ACCAACCTGGCATCGTTCCTCCCGGGAGCTAGCCAGCTTCAGAAAGCACATACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR GCA 90 bp TTCACAATGGCCGGCTTCACAGTCCCAATTCAGCCTTGTCAACGGTGCAGGAGCTCAGCCTCTTCTGCTTaGCAAGCCAGGGGTACGCAG +
Preference number: 4 (lower is better)
Translates to: FTMAGFTVPIQPCQRCRSSASSA*QARGTQ
Trigger: CTGCGTACCCCTGGCTTGGCAAGCAGAAGAGGCTGA...GCTCCTGCACCGTTGACAAGGCTGAATTGGGACTGTGAAGCCGGCCATTGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450650.5
CDS-3UTR GCA 90 bp ACACTGGGTGGGGCGCCACGTCTCTACCGAGCTTGGCAGCCACAGCAGTTCTGGGTTTGGCAGCAAGGATaGTGTATGTGCTTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: TLGGAPRLYRAWQPQQFWVWQQG*CMCFLK
Trigger: CTTCAGAAAGCACATACAGCATCCTTGCTGCCAAAC...CCAGAACTGCTGTGGCTGCCAAGCTCGGTAGAGACGTGGCGCCCCACCCAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR CCA 90 bp GCAAACACCCAGTGGACAGCTCTTGTGTCACCCATAGCACCCGAGGGTGGTCAACAGGTTAGAGAGTGGTaGAGGAGACTGGCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: ANTQWTALVSPIAPEGGQQVREW*RRLAEE
Trigger: CTCCTCTGCCAGTCTCCTCCACCACTCTCTAACCTG...TTGACCACCCTCGGGTGCTATGGGTGACACAAGAGCTGTCCACTGGGTGTTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR CCA 90 bp ACACTGGGTGGGGCGCCACGTCTCTACCGAGCTTGGCAGCCACAGCAGTTCTGGATTGTGCAGAGCCCCTaGCAGCTATTTTATTCTGAC +
Preference number: 4 (lower is better)
Translates to: TLGGAPRLYRAWQPQQFWIVQSP*QLFYSD
Trigger: GTCAGAATAAAATAGCTGCCAGGGGCTCTGCACAAT...CCAGAACTGCTGTGGCTGCCAAGCTCGGTAGAGACGTGGCGCCCCACCCAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458085.6
3UTR CAA 72 bp TTTCACAATGGCCGGCTTCACAGTCCCAATTCAGCCTaGTCAACGGTGCAGGAGCGGGGCAATGCGTCTCAG +
Preference number: 4 (lower is better)
Translates to: FHNGRLHSPNSA*STVQERGNASQ
Trigger: CTGAGACGCATTGCCCCGCTCCTGCACCGTTGACAAGGCTGAATTGGGACTGTGAAGCCGGCCATTGTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450650.5
3UTR CAA 72 bp GGCCTTCTCCAGCAGGCAGGGCCAGAACTCTTGGTTTaGGTGGCGAGGACGCACAAAGAGGCATTTATCTCC +
Preference number: 4 (lower is better)
Translates to: GLLQQAGPELLV*VARTHKEAFIS
Trigger: GGAGATAAATGCCTCTTTGTGCGTCCTCGCCACCAAAACCAAGAGTTCTGGCCCTGCCTGCTGGAGAAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485248.2
CDS-3UTR TCA 90 bp GGTGCCTGTCACTGTCTGGCATTTTCAGGAAGATTCGGAGCAAGAACTCCGCTGCCCATGCTCAGGCAGTaGTCCCGCAAGGTGGTAAAG +
Preference number: 4 (lower is better)
Translates to: GACHCLAFSGRFGARTPLPMLRQ*SRKVVK
Trigger: CTTTACCACCTTGCGGGATCACTGCCTGAGCATGGG...CAGCGGAGTTCTTGCTCCGAATCTTCCTGAAAATGCCAGACAGTGACAGGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR TCA 90 bp GTCCCCTTTCTCCAATCCCACGTAAGGCCCCTGGGTGCTAGGTACCATACCTGCGCCAGCATACTGGTGTaGAAAGCTTTGGACCATCAG +
Preference number: 4 (lower is better)
Translates to: VPFLQSHVRPLGARYHTCASILV*KALDHQ
Trigger: CTGATGGTCCAAAGCTTTTCACACCAGTATGCTGGC...GCAGGTATGGTACCTAGCACCCAGGGGCCTTACGTGGGATTGGAGAAAGGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR TCA 90 bp AGGCTGAATACATCCCAAAGTGCTCAGATGAGCTGCTTGGTGGCCACAGGCTTAGTTTCCTCCCACTCCTaGGACCCATCACTCCAGCGC +
Preference number: 4 (lower is better)
Translates to: RLNTSQSAQMSCLVATGLVSSHS*DPSLQR
Trigger: GCGCTGGAGTGATGGGTCTCAGGAGTGGGAGGAAAC...TAAGCCTGTGGCCACCAAGCAGCTCATCTGAGCACTTTGGGATGTATTCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR TCA 90 bp TTCACAATGGCCGGCTTCACAGTCCCAATTCAGCCTTGTCAACGGTGCAGGAGCTGGTTGAGAAGGCCCTaGAGCTGGGTGGCATCAATG +
Preference number: 4 (lower is better)
Translates to: FTMAGFTVPIQPCQRCRSWLRRP*SWVASM
Trigger: CATTGATGCCACCCAGCTTCAGGGCCTTCTCAACCA...GCTCCTGCACCGTTGACAAGGCTGAATTGGGACTGTGAAGCCGGCCATTGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450650.5
CDS-3UTR TCA 90 bp GCTCTTGTGTCACCCATAGCACCCGAGGGTGGTCAAAGTGGCTCATTCTGGCTCCAGGGCAACGTAGGCTaGATACATCCCAAAGTGCTC +
Preference number: 4 (lower is better)
Translates to: ALVSPIAPEGGQSGSFWLQGNVG*IHPKVL
Trigger: GAGCACTTTGGGATGTATTCAGCCTACGTTGCCCTG...GAGCCAGAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACACAAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR TCA 90 bp TTCCTCTTTGCTTCAGTTGTACATGACCAGGCTCATCCACTCCATTTCTGTCAGCAGCACACTGCCGAGTaGGGGGCTGGCAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: FLFASVVHDQAHPLHFCQQHTAE*GAGRAA
Trigger: TGCTGCCCTGCCAGCCCCTCACTCGGCAGTGTGCTG...CTGACAGAAATGGAGTGGATGAGCCTGGTCATGTACAACTGAAGCAAAGAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450650.5
CDS-3UTR TCA 90 bp GGATTCCTCTGTGGGAGATGGGCTGTGTCTCTGATAGATTCCAAAGCACAGCCACGGGCCGTGGCACTGTaGGGACCATTTGGATTCCTC +
Preference number: 4 (lower is better)
Translates to: GFLCGRWAVSLIDSKAQPRAVAL*GPFGFL
Trigger: GAGGAATCCAAATGGTCCTCACAGTGCCACGGCCCG...TGGCTGTGCTTTGGAATCTATCAGAGACACAGCCCATCTCCCACAGAGGAATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450650.5
CDS-3UTR GCA 90 bp ACAGCTCTTGTGTCACCCATAGCACCCGAGGGTGGTCAAAGTGGCTCATTCTGGAGTCAAGGATCCCAGTaGTGCCAGGAACCAGCAGTC +
Preference number: 4 (lower is better)
Translates to: TALVSPIAPEGGQSGSFWSQGSQ*CQEPAV
Trigger: GACTGCTGGTTCCTGGCAGCACTGGGATCCTTGACT...CCAGAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACACAAGAGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR GCA 90 bp ATGTGCTTTCTGAAGCTGGCTAGCTCCCGGGAGGAACGATGCCAGGTTGGTGGGAAATGGCTGCTCAGGTaGCTGTCACTGTCTGGCATT +
Preference number: 4 (lower is better)
Translates to: MCFLKLASSREERCQVGGKWLLR*LSLSGI
Trigger: AATGCCAGACAGTGACAGGCACCTGAGCAGCCATTT...CCCACCAACCTGGCATCGTTCCTCCCGGGAGCTAGCCAGCTTCAGAAAGCACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR GCA 90 bp GCAAACACCCAGTGGACAGCTCTTGTGTCACCCATAGCACCCGAGGGTGGTCAATCAGAGCCACCAAGCTaGGGCACTCATCTAAGGAGA +
Preference number: 4 (lower is better)
Translates to: ANTQWTALVSPIAPEGGQSEPPS*GTHLRR
Trigger: TCTCCTTAGATGAGTGCCGCAGCTTGGTGGCTCTGA...TTGACCACCCTCGGGTGCTATGGGTGACACAAGAGCTGTCCACTGGGTGTTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR GCA 90 bp GCAAACACCCAGTGGACAGCTCTTGTGTCACCCATAGCACCCGAGGGTGGTCAACAGGGAGACATCTCCTaGTTCCTTTTCCAGGGCAAC +
Preference number: 4 (lower is better)
Translates to: ANTQWTALVSPIAPEGGQQGDIS*FLFQGN
Trigger: GTTGCCCTGGAAAAGGAAGCAGGAGATGTCTCCCTG...TTGACCACCCTCGGGTGCTATGGGTGACACAAGAGCTGTCCACTGGGTGTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR GCA 90 bp AGGCTGAATACATCCCAAAGTGCTCAGATGAGCTGCTTGGTGGCCACAGGCTTACAGCCTTGTCAACGGTaGAGGAGCGGGGCAATGCGT +
Preference number: 4 (lower is better)
Translates to: RLNTSQSAQMSCLVATGLQPCQR*RSGAMR
Trigger: ACGCATTGCCCCGCTCCTGCACCGTTGACAAGGCTG...TAAGCCTGTGGCCACCAAGCAGCTCATCTGAGCACTTTGGGATGTATTCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450650.5
CDS-3UTR GCA 90 bp AGCAGGCAGGGCCAGAACTCTTGGTTTTGGTGGCGAGGACGCACAAAGAGGCATCCACATTGCCAGAACTaGGCCTCCTTGTTGGATGTC +
Preference number: 4 (lower is better)
Translates to: SRQGQNSWFWWRGRTKRHPHCQN*ASLLDV
Trigger: GACATCCAACAAGGAGGCGCAGTTCTGGCAATGTGG...ATGCCTCTTTGTGCGTCCTCGCCACCAAAACCAAGAGTTCTGGCCCTGCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485248.2
CDS-3UTR GCA 90 bp GGAAGCCATAGTGCAGATCGGAATAGGATCCGAGCAGCTTGGCATAGGCCTTCTACCCACTGGCCACATTaGCAGAACTGCGCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: GSHSADRNRIRAAWHRPSTHWPH*QNCASL
Trigger: CAAGGAGGCGCAGTTCTGGCAATGTGGCCAGTGGGT...AGAAGGCCTATGCCAAGCTGCTCGGATCCTATTCCGATCTGCACTATGGCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485248.2
CDS-3UTR CCA 90 bp TCTTGTGTCACCCATAGCACCCGAGGGTGGTCAAAGTGGCTCATTCTGGCTCTTCATGGCCGGCCGTCTTaGAGAAAGAGCAGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: SCVTHSTRGWSKWLILALHGRPS*RKSSAG
Trigger: ACCAGCACTGCTCTTTCTCCAAGACGGCCGGCCATG...AAGAGCCAGAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACACAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR CCA 90 bp TCTTGTGTCACCCATAGCACCCGAGGGTGGTCAAAGTGGCTCATTCTGGCTCTTAGTGGTGGAGGAGACTaGCAGAGGAGGAGAGCATGG +
Preference number: 4 (lower is better)
Translates to: SCVTHSTRGWSKWLILALSGGGD*QRRRAW
Trigger: CCATGCTCTCCTCCTCTGCCAGTCTCCTCCACCACT...AAGAGCCAGAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACACAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR CCA 90 bp GCAAACACCCAGTGGACAGCTCTTGTGTCACCCATAGCACCCGAGGGTGGTCAAGCAGCTTCTGGCCTATaGAAGAATCTGCTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: ANTQWTALVSPIAPEGGQAASGL*KNLLQG
Trigger: TCCCTGCAGCAGATTCTTCCATAGGCCAGAAGCTGC...TTGACCACCCTCGGGTGCTATGGGTGACACAAGAGCTGTCCACTGGGTGTTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR CCA 90 bp TCTCCAGCAGGCAGGGCCAGAACTCTTGGTTTTGGTGGCGAGGACGCACAAAGAGCAGCTTCTGGCCTATaGAAGAATCTGCTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: SPAGRARTLGFGGEDAQRAASGL*KNLLQG
Trigger: TCCCTGCAGCAGATTCTTCCATAGGCCAGAAGCTGC...TCTTTGTGCGTCCTCGCCACCAAAACCAAGAGTTCTGGCCCTGCCTGCTGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485248.2
CDS-3UTR CCA 90 bp GTCCCCTTTCTCCAATCCCACGTAAGGCCCCTGGGTGCTAGGTACCATACCTGCAACTCTTGGTTTTGGTaGCGAGGACGCACAAAGAGG +
Preference number: 4 (lower is better)
Translates to: VPFLQSHVRPLGARYHTCNSWFW*RGRTKR
Trigger: CCTCTTTGTGCGTCCTCGCCACCAAAACCAAGAGTT...GCAGGTATGGTACCTAGCACCCAGGGGCCTTACGTGGGATTGGAGAAAGGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR CCA 90 bp ACAGCTCTTGTGTCACCCATAGCACCCGAGGGTGGTCAAAGTGGCTCATTCTGGAGGATCCGAGCAGCTTaGCATAGGCCTTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: TALVSPIAPEGGQSGSFWRIRAA*HRPSPA
Trigger: TGCTGGAGAAGGCCTATGCCAAGCTGCTCGGATCCT...CCAGAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACACAAGAGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR CCA 90 bp CTGGGCCAGCCAAGGACCGAACCCAGGCTGTTGGGAGACAGCTTGGACTCTGTTGTGCCTGTCACTGTCTaGCATTTTCAGGAAGATTCG +
Preference number: 4 (lower is better)
Translates to: LGQPRTEPRLLGDSLDSVVPVTV*HFQEDS
Trigger: CGAATCTTCCTGAAAATGCCAGACAGTGACAGGCAC...AACAGAGTCCAAGCTGTCTCCCAACAGCCTGGGTTCGGTCCTTGGCTGGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR CCA 90 bp GCTCTTGTGTCACCCATAGCACCCGAGGGTGGTCAAAGTGGCTCATTCTGGCTCCATAGCACCCGAGGGTaGTCAAAGTGGCTCATTCTG +
Preference number: 4 (lower is better)
Translates to: ALVSPIAPEGGQSGSFWLHSTRG*SKWLIL
Trigger: CAGAATGAGCCACTTTGACCACCCTCGGGTGCTATG...GAGCCAGAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACACAAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR CCA 90 bp TCTGCAAACACCCAGTGGACAGCTCTTGTGTCACCCATAGCACCCGAGGGTGGTTCTGCAAACACCCAGTaGACAGCTCTTGTGTCACCC +
Preference number: 4 (lower is better)
Translates to: SANTQWTALVSPIAPEGGSANTQ*TALVSP
Trigger: GGGTGACACAAGAGCTGTCCACTGGGTGTTTGCAGA...ACCACCCTCGGGTGCTATGGGTGACACAAGAGCTGTCCACTGGGTGTTTGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR CCA 90 bp GCAAACACCCAGTGGACAGCTCTTGTGTCACCCATAGCACCCGAGGGTGGTCAAGGAGGGTCAGGAGTCTaGGGTTCAATTCTTGGTCCT +
Preference number: 4 (lower is better)
Translates to: ANTQWTALVSPIAPEGGQGGSGV*GSILGP
Trigger: AGGACCAAGAATTGAACCCCAGACTCCTGACCCTCC...TTGACCACCCTCGGGTGCTATGGGTGACACAAGAGCTGTCCACTGGGTGTTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450650.5
CDS-3UTR CCA 90 bp GGTGCCTGTCACTGTCTGGCATTTTCAGGAAGATTCGGAGCAAGAACTCCGCTGCGTCTCTACCGAGCTTaGCAGCCACAGCAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: GACHCLAFSGRFGARTPLRLYRA*QPQQFW
Trigger: CCAGAACTGCTGTGGCTGCCAAGCTCGGTAGAGACG...CAGCGGAGTTCTTGCTCCGAATCTTCCTGAAAATGCCAGACAGTGACAGGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR CCA 90 bp TGTATGTGCTTTCTGAAGCTGGCTAGCTCCCGGGAGGAACGATGCCAGGTTGGTCAGGTTGGTGGGAGGTaGCCGAGTAGGAGAAGGAAA +
Preference number: 4 (lower is better)
Translates to: CMCFLKLASSREERCQVGQVGGR*PSRRRK
Trigger: TTTCCTTCTCCTACTCGGCCACCTCCCACCAACCTG...ACCAACCTGGCATCGTTCCTCCCGGGAGCTAGCCAGCTTCAGAAAGCACATACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR TCA 90 bp GGTGCCTGTCACTGTCTGGCATTTTCAGGAAGATTCGGAGCAAGAACTCCGCTGGATGGAGGTCTCCACTaGAGGCTCCTGGTAATACGC +
Preference number: 4 (lower is better)
Translates to: GACHCLAFSGRFGARTPLDGGLH*RLLVIR
Trigger: GCGTATTACCAGGAGCCTTCAGTGGAGACCTCCATC...CAGCGGAGTTCTTGCTCCGAATCTTCCTGAAAATGCCAGACAGTGACAGGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR TCA 90 bp CCACCATACTGGGCAGCACAGCCTCTTAGAATGAGAGCCAGATTCTTGAGTGATCGCTGTCGCTGTACCTaGGGGTCACCAGATGCAGCA +
Preference number: 4 (lower is better)
Translates to: PPYWAAQPLRMRARFLSDRCRCT*GSPDAA
Trigger: TGCTGCATCTGGTGACCCTCAGGTACAGCGACAGCG...ATCACTCAAGAATCTGGCTCTCATTCTAAGAGGCTGTGCTGCCCAGTATGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR TCA 90 bp TCACAGTCCCAATTCAGCCTTGTCAACGGTGCAGGAGCGGGGCAATGCGTCTCAAGCCAGATTCTTGAGTaGTCACTGGGAGCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: SQSQFSLVNGAGAGQCVSSQILE*SLGACP
Trigger: AGGACAAGCTCCCAGTGATCACTCAAGAATCTGGCT...TGAGACGCATTGCCCCGCTCCTGCACCGTTGACAAGGCTGAATTGGGACTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450650.5
CDS-3UTR TCA 90 bp AGGCTGAATACATCCCAAAGTGCTCAGATGAGCTGCTTGGTGGCCACAGGCTTACCCAAAGTGCTCAGATaGGCTGCTTGGTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: RLNTSQSAQMSCLVATGLPKVLR*AAWWPQ
Trigger: CTGTGGCCACCAAGCAGCTCATCTGAGCACTTTGGG...TAAGCCTGTGGCCACCAAGCAGCTCATCTGAGCACTTTGGGATGTATTCAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR TCA 90 bp GCAAACACCCAGTGGACAGCTCTTGTGTCACCCATAGCACCCGAGGGTGGTCAAGGCTCTTCCAAGAAATaGATCCAACTGGTGACAGGG +
Preference number: 4 (lower is better)
Translates to: ANTQWTALVSPIAPEGGQGSSKK*IQLVTG
Trigger: CCCTGTCACCAGTTGGATTCATTTCTTGGAAGAGCC...TTGACCACCCTCGGGTGCTATGGGTGACACAAGAGCTGTCCACTGGGTGTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR TCA 90 bp TGTGTCACCCATAGCACCCGAGGGTGGTCAAAGTGGCTCATTCTGGCTCTTCCAAGAGCATGGGAGGGATaGCCGCAAAGGATACTTCCA +
Preference number: 4 (lower is better)
Translates to: CVTHSTRGWSKWLILALPRAWEG*PQRILP
Trigger: TGGAAGTATCCTTTGCGGTCATCCCTCCCATGCTCT...TGGAAGAGCCAGAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450650.5
CDS-3UTR TCA 90 bp AAAAAGCCCTCTTGTTTCACAATGGCCGGCTTCACAGTCCCAATTCAGCCTTGTGCCACGGGCCTGGAGTaGGTCTCTGAACTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: KKPSCFTMAGFTVPIQPCATGLE*VSELPL
Trigger: CAGAGGCAGTTCAGAGACTCACTCCAGGCCCGTGGC...ACAAGGCTGAATTGGGACTGTGAAGCCGGCCATTGTGAAACAAGAGGGCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450650.5
CDS-3UTR GCA 90 bp GTCCCCTTTCTCCAATCCCACGTAAGGCCCCTGGGTGCTAGGTACCATACCTGCGCCTATGGAAGAATCTaGTGCAGGGAATGTCTCATC +
Preference number: 4 (lower is better)
Translates to: VPFLQSHVRPLGARYHTCAYGRI*CRECLI
Trigger: GATGAGACATTCCCTGCAGCAGATTCTTCCATAGGC...GCAGGTATGGTACCTAGCACCCAGGGGCCTTACGTGGGATTGGAGAAAGGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR GCA 90 bp TCTGCAAACACCCAGTGGACAGCTCTTGTGTCACCCATAGCACCCGAGGGTGGTAAATGGCTGCTCAGGTaGCTGTCACTGTCTGGCATT +
Preference number: 4 (lower is better)
Translates to: SANTQWTALVSPIAPEGGKWLLR*LSLSGI
Trigger: AATGCCAGACAGTGACAGGCACCTGAGCAGCCATTT...ACCACCCTCGGGTGCTATGGGTGACACAAGAGCTGTCCACTGGGTGTTTGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR GCA 90 bp CCTTCTGGAAAACATGCTGGTAGTGAACAAGGCGCTTCCACAGTCGCGCAAACTAGTGAGTCTCTGAACTaGCTCTGCCCAGCGTCTCCC +
Preference number: 4 (lower is better)
Translates to: PSGKHAGSEQGASTVAQTSESLN*LCPASP
Trigger: GGGAGACGCTGGGCAGAGGCAGTTCAGAGACTCACT...AGTTTGCGCGACTGTGGAAGCGCCTTGTTCACTACCAGCATGTTTTCCAGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450650.5
CDS-3UTR GCA 90 bp CGGATGACACTGGGTGGGGCGCCACGTCTCTACCGAGCTTGGCAGCCACAGCAGTCCAGCTCTGTCATTTaGATCTGGTATAAACTTTTG +
Preference number: 4 (lower is better)
Translates to: RMTLGGAPRLYRAWQPQQSSSVI*IWYKLL
Trigger: CAAAAGTTTATACCAGATGCAAATGACAGAGCTGGA...CTGCTGTGGCTGCCAAGCTCGGTAGAGACGTGGCGCCCCACCCAGTGTCATCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR GCA 90 bp GGAGGTGGCCGAGTAGGAGAAGGAAAGGTTTCACGGGGTACTGCCAATTGCTTGGTAAGAGGCTCATTGTaGAGAGCCCCTGGCAGCTAT +
Preference number: 4 (lower is better)
Translates to: GGGRVGEGKVSRGTANCLVRGSL*RAPGSY
Trigger: ATAGCTGCCAGGGGCTCTGCACAATGAGCCTCTTAC...CAAGCAATTGGCAGTACCCCGTGAAACCTTTCCTTCTCCTACTCGGCCACCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR CCA 90 bp AGCCATAGTGCAGATCGGAATAGGATCCGAGCAGCTTGGCATAGGCCTTCTCCACAGGTTAGAGAGTGGTaGAGGAGACTGGCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: SHSADRNRIRAAWHRPSPQVREW*RRLAEE
Trigger: CTCCTCTGCCAGTCTCCTCCACCACTCTCTAACCTG...TGGAGAAGGCCTATGCCAAGCTGCTCGGATCCTATTCCGATCTGCACTATGGCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485248.2
CDS-3UTR CCA 90 bp TGTATGTGCTTTCTGAAGCTGGCTAGCTCCCGGGAGGAACGATGCCAGGTTGGTGAGAGGCGTTTTTCCTaGAGCAGCTTCTGGCCTATG +
Preference number: 4 (lower is better)
Translates to: CMCFLKLASSREERCQVGERRFS*SSFWPM
Trigger: CATAGGCCAGAAGCTGCTCCAGGAAAAACGCCTCTC...ACCAACCTGGCATCGTTCCTCCCGGGAGCTAGCCAGCTTCAGAAAGCACATACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR CCA 90 bp TCTGCAAACACCCAGTGGACAGCTCTTGTGTCACCCATAGCACCCGAGGGTGGTAACTCTTGGTTTTGGTaGCGAGGACGCACAAAGAGG +
Preference number: 4 (lower is better)
Translates to: SANTQWTALVSPIAPEGGNSWFW*RGRTKR
Trigger: CCTCTTTGTGCGTCCTCGCCACCAAAACCAAGAGTT...ACCACCCTCGGGTGCTATGGGTGACACAAGAGCTGTCCACTGGGTGTTTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR CCA 90 bp AGCAGGCAGGGCCAGAACTCTTGGTTTTGGTGGCGAGGACGCACAAAGAGGCATAACTCTTGGTTTTGGTaGCGAGGACGCACAAAGAGG +
Preference number: 4 (lower is better)
Translates to: SRQGQNSWFWWRGRTKRHNSWFW*RGRTKR
Trigger: CCTCTTTGTGCGTCCTCGCCACCAAAACCAAGAGTT...ATGCCTCTTTGTGCGTCCTCGCCACCAAAACCAAGAGTTCTGGCCCTGCCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485248.2
CDS-3UTR CCA 90 bp GGAGGTGGCCGAGTAGGAGAAGGAAAGGTTTCACGGGGTACTGCCAATTGCTTGCTGTGCTGTATCTGTTaGCCCACTTGGAGTGGCACA +
Preference number: 4 (lower is better)
Translates to: GGGRVGEGKVSRGTANCLLCCIC*PTWSGT
Trigger: TGTGCCACTCCAAGTGGGCCAACAGATACAGCACAG...CAAGCAATTGGCAGTACCCCGTGAAACCTTTCCTTCTCCTACTCGGCCACCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR CCA 90 bp ACAGCTCTTGTGTCACCCATAGCACCCGAGGGTGGTCAAAGTGGCTCATTCTGGTGGGACCATCCTTCGTaGAGTGTGTTTCCATGGTCC +
Preference number: 4 (lower is better)
Translates to: TALVSPIAPEGGQSGSFWWDHPS*SVFPWS
Trigger: GGACCATGGAAACACACTCCACGAAGGATGGTCCCA...CCAGAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACACAAGAGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR CCA 90 bp ACACTGGGTGGGGCGCCACGTCTCTACCGAGCTTGGCAGCCACAGCAGTTCTGGTTCCTAAACATTATTTaGGACCATCCTTCGTGGAGT +
Preference number: 4 (lower is better)
Translates to: TLGGAPRLYRAWQPQQFWFLNII*DHPSWS
Trigger: ACTCCACGAAGGATGGTCCCAAATAATGTTTAGGAA...CCAGAACTGCTGTGGCTGCCAAGCTCGGTAGAGACGTGGCGCCCCACCCAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR CCA 90 bp CAGCTTGAAGTCCCCCGGATGACACTGGGTGGGGCGCCACGTCTCTACCGAGCTCACTTGGAAATCGAGTaGAAATTTTGCATCTTCTGC +
Preference number: 4 (lower is better)
Translates to: QLEVPRMTLGGAPRLYRAHLEIE*KFCIFC
Trigger: GCAGAAGATGCAAAATTTCCACTCGATTTCCAAGTG...AGCTCGGTAGAGACGTGGCGCCCCACCCAGTGTCATCCGGGGGACTTCAAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR CCA 90 bp GGAAAACATGCTGGTAGTGAACAAGGCGCTTCCACAGTCGCGCAAACTCCTCTTGGCCCTGAAGCTGGGTaGCATCAATGTCCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: GKHAGSEQGASTVAQTPLGPEAG*HQCPAS
Trigger: AGAGGCTGGACATTGATGCCACCCAGCTTCAGGGCC...AAGAGGAGTTTGCGCGACTGTGGAAGCGCCTTGTTCACTACCAGCATGTTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450650.5
CDS-3UTR CCA 90 bp GCTCTTGTGTCACCCATAGCACCCGAGGGTGGTCAAAGTGGCTCATTCTGGCTCTCACAACCACCATACTaGGCAGCACAGCCTCTTAGA +
Preference number: 4 (lower is better)
Translates to: ALVSPIAPEGGQSGSFWLSQPPY*AAQPLR
Trigger: TCTAAGAGGCTGTGCTGCCCAGTATGGTGGTTGTGA...GAGCCAGAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACACAAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
3UTR CAA 72 bp TGGGCAGCACAGCCTCTTAGAATGAGAGCCAGATTCTaGAGTGATCACTGGGAGCTTGTCCTGAGCCATGGG +
Preference number: 4 (lower is better)
Translates to: WAAQPLRMRARF*SDHWELVLSHG
Trigger: CCCATGGCTCAGGACAAGCTCCCAGTGATCACTCAAGAATCTGGCTCTCATTCTAAGAGGCTGTGCTGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR TCA 90 bp AGGGCCAGAACTCTTGGTTTTGGTGGCGAGGACGCACAAAGAGGCATTTATCTCTCATCCAGGATGAAGTaGGGAGGACCCCCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: RARTLGFGGEDAQRGIYLSSRMK*GGPPGR
Trigger: TCTACCAGGGGGTCCTCCTCACTTCATCCTGGATGA...GAGATAAATGCCTCTTTGTGCGTCCTCGCCACCAAAACCAAGAGTTCTGGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485248.2
CDS-3UTR TCA 90 bp TCTTGTGTCACCCATAGCACCCGAGGGTGGTCAAAGTGGCTCATTCTGGCTCTTCTGTACTGTGGGTTCTaGGTCAAGGATCCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: SCVTHSTRGWSKWLILALLYCGF*VKDPSA
Trigger: AGCACTGGGATCCTTGACTCAGAACCCACAGTACAG...AAGAGCCAGAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACACAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR TCA 90 bp GGCCGAGTAGGAGAAGGAAAGGTTTCACGGGGTACTGCCAATTGCTTGTTTAAAGTTTCCTCCCACTCCTaGGACCCATCACTCCAGCGC +
Preference number: 4 (lower is better)
Translates to: GRVGEGKVSRGTANCLFKVSSHS*DPSLQR
Trigger: GCGCTGGAGTGATGGGTCTCAGGAGTGGGAGGAAAC...TTTAAACAAGCAATTGGCAGTACCCCGTGAAACCTTTCCTTCTCCTACTCGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR TCA 90 bp ATGTGCTTTCTGAAGCTGGCTAGCTCCCGGGAGGAACGATGCCAGGTTGGTGGGCTTGCACAGAGAAGTTaGATTGAGCATCATTCCGAG +
Preference number: 4 (lower is better)
Translates to: MCFLKLASSREERCQVGGLAQRS*IEHHSE
Trigger: CTCGGAATGATGCTCAATTCAACTTCTCTGTGCAAG...CCCACCAACCTGGCATCGTTCCTCCCGGGAGCTAGCCAGCTTCAGAAAGCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR TCA 90 bp TGTATGTGCTTTCTGAAGCTGGCTAGCTCCCGGGAGGAACGATGCCAGGTTGGTTGGACAGTGTTTCTGTaGGCCAGCCAGAATCACTTG +
Preference number: 4 (lower is better)
Translates to: CMCFLKLASSREERCQVGWTVFL*ASQNHL
Trigger: CAAGTGATTCTGGCTGGCTCACAGAAACACTGTCCA...ACCAACCTGGCATCGTTCCTCCCGGGAGCTAGCCAGCTTCAGAAAGCACATACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR TCA 90 bp TTAACGGTAAGAGGCTCATTGTGCAGAGCCCCTGGCAGCTATTTTATTCTGACACCCAGTAAGGGCCTGTaGGAGCTGTCCCTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: LTVRGSLCRAPGSYFILTPSKGL*ELSLPQ
Trigger: CTGAGGGAGGGACAGCTCTCACAGGCCCTTACTGGG...TGTCAGAATAAAATAGCTGCCAGGGGCTCTGCACAATGAGCCTCTTACCGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR GCA 90 bp TCTGGAAAACATGCTGGTAGTGAACAAGGCGCTTCCACAGTCGCGCAAACTCCTGTCTCCCGCTGTGAATaGAGCATAGCAATGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SGKHAGSEQGASTVAQTPVSRCE*SIAMLG
Trigger: CCCCAGCATTGCTATGCTGCATTCACAGCGGGAGAC...AGGAGTTTGCGCGACTGTGGAAGCGCCTTGTTCACTACCAGCATGTTTTCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450650.5
CDS-3UTR GCA 90 bp TTAGATTTATCACAACCACCATACTGGGCAGCACAGCCTCTTAGAATGAGAGCCCAGGAGACAGCACACTaGCGAGTGAGGGGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: LDLSQPPYWAAQPLRMRAQETAH*RVRGWQ
Trigger: CTGCCAGCCCCTCACTCGGCAGTGTGCTGTCTCCTG...GGCTCTCATTCTAAGAGGCTGTGCTGCCCAGTATGGTGGTTGTGATAAATCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450650.5
CDS-3UTR CCA 90 bp CATCCTCGAGGAAGCCATAGTGCAGATCGGAATAGGATCCGAGCAGCTTGGCATTCTCAGGTTAGAGAGTaGTGGAGGAGACTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: HPRGSHSADRNRIRAAWHSQVRE*WRRLAE
Trigger: CTCTGCCAGTCTCCTCCACCACTCTCTAACCTGAGA...ATGCCAAGCTGCTCGGATCCTATTCCGATCTGCACTATGGCTTCCTCGAGGATG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485248.2
CDS-3UTR CCA 90 bp GTCCCCTTTCTCCAATCCCACGTAAGGCCCCTGGGTGCTAGGTACCATACCTGCGCTTCCATATCACATTaGAGAGGCGTTTTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: VPFLQSHVRPLGARYHTCASISH*RGVFPG
Trigger: TCCAGGAAAAACGCCTCTCCAATGTGATATGGAAGC...GCAGGTATGGTACCTAGCACCCAGGGGCCTTACGTGGGATTGGAGAAAGGGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR CCA 90 bp ACAGCTCTTGTGTCACCCATAGCACCCGAGGGTGGTCAAAGTGGCTCATTCTGGCTTCTGCCTGTACTGTaGGTTCTGAGTCAAGGATCC +
Preference number: 4 (lower is better)
Translates to: TALVSPIAPEGGQSGSFWLLPVL*VLSQGS
Trigger: GGATCCTTGACTCAGAACCCACAGTACAGGCAGAAG...CCAGAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACACAAGAGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR CCA 90 bp ACTCTTGGTTTTGGTGGCGAGGACGCACAAAGAGGCATTTATCTCCCTGGACAGAGGATCCGAGCAGCTTaGCATAGGCCTTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: TLGFGGEDAQRGIYLPGQRIRAA*HRPSPA
Trigger: TGCTGGAGAAGGCCTATGCCAAGCTGCTCGGATCCT...CTGTCCAGGGAGATAAATGCCTCTTTGTGCGTCCTCGCCACCAAAACCAAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485248.2
CDS-3UTR CCA 90 bp CTGCTCAGGTGCCTGTCACTGTCTGGCATTTTCAGGAAGATTCGGAGCAAGAACTTGGCCCACTTGGAGTaGCACAGGTTATCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: LLRCLSLSGIFRKIRSKNLAHLE*HRLSGS
Trigger: GCTCCCTGATAACCTGTGCCACTCCAAGTGGGCCAA...GTTCTTGCTCCGAATCTTCCTGAAAATGCCAGACAGTGACAGGCACCTGAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR CCA 90 bp GCAAACACCCAGTGGACAGCTCTTGTGTCACCCATAGCACCCGAGGGTGGTCAACGTTTCTTATGTAGCTaGCTTTTCCGCGGATCACAG +
Preference number: 4 (lower is better)
Translates to: ANTQWTALVSPIAPEGGQRFLCS*LFRGSQ
Trigger: CTGTGATCCGCGGAAAAGCCAGCTACATAAGAAACG...TTGACCACCCTCGGGTGCTATGGGTGACACAAGAGCTGTCCACTGGGTGTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR CCA 90 bp CTGGGCCAGCCAAGGACCGAACCCAGGCTGTTGGGAGACAGCTTGGACTCTGTTTGGAGTGTGTTTCCATaGTCCAGGGTAATTGGAATT +
Preference number: 4 (lower is better)
Translates to: LGQPRTEPRLLGDSLDSVWSVFP*SRVIGI
Trigger: AATTCCAATTACCCTGGACCATGGAAACACACTCCA...AACAGAGTCCAAGCTGTCTCCCAACAGCCTGGGTTCGGTCCTTGGCTGGCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR CCA 90 bp CCTGGGCCAGCCAAGGACCGAACCCAGGCTGTTGGGAGACAGCTTGGACTCTGTCACTTGGAAATCGAGTaGAAATTTTGCATCTTCTGC +
Preference number: 4 (lower is better)
Translates to: PGPAKDRTQAVGRQLGLCHLEIE*KFCIFC
Trigger: GCAGAAGATGCAAAATTTCCACTCGATTTCCAAGTG...ACAGAGTCCAAGCTGTCTCCCAACAGCCTGGGTTCGGTCCTTGGCTGGCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR CCA 90 bp CTGAATACATCCCAAAGTGCTCAGATGAGCTGCTTGGTGGCCACAGGCTTAACTGGCCCTGAAGCTGGGTaGCATCAATGTCCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: LNTSQSAQMSCLVATGLTGPEAG*HQCPAS
Trigger: AGAGGCTGGACATTGATGCCACCCAGCTTCAGGGCC...AGTTAAGCCTGTGGCCACCAAGCAGCTCATCTGAGCACTTTGGGATGTATTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR CCA 90 bp GGAAAACATGCTGGTAGTGAACAAGGCGCTTCCACAGTCGCGCAAACTCCTCTTCGCGCAAACTCCTCTTaGTCTAGCCGCCCATTCACT +
Preference number: 4 (lower is better)
Translates to: GKHAGSEQGASTVAQTPLRANSS*SSRPFT
Trigger: AGTGAATGGGCGGCTAGACCAAGAGGAGTTTGCGCG...AAGAGGAGTTTGCGCGACTGTGGAAGCGCCTTGTTCACTACCAGCATGTTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450650.5
CDS-3UTR CCA 90 bp ACAGCTCTTGTGTCACCCATAGCACCCGAGGGTGGTCAAAGTGGCTCATTCTGGTGTTGGGAGACAGCTTaGACTCTGTTTCATGCAGGG +
Preference number: 4 (lower is better)
Translates to: TALVSPIAPEGGQSGSFWCWETA*TLFHAG
Trigger: CCCTGCATGAAACAGAGTCCAAGCTGTCTCCCAACA...CCAGAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACACAAGAGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR CCA 90 bp ATGCAGGGCTGGTTTAGATTTATCACAACCACCATACTGGGCAGCACAGCCTCTCCGAACCCAGGCTGTTaGGAGACAGCTTGGACTCTG +
Preference number: 4 (lower is better)
Translates to: MQGWFRFITTTILGSTASPNPGC*ETAWTL
Trigger: CAGAGTCCAAGCTGTCTCCCAACAGCCTGGGTTCGG...AGAGGCTGTGCTGCCCAGTATGGTGGTTGTGATAAATCTAAACCAGCCCTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR CCA 90 bp GTGTCACCCATAGCACCCGAGGGTGGTCAAAGTGGCTCATTCTGGCTCTTCCAACCTCTTGTTTCACAATaGCCGGCTTCACAGTCCCAA +
Preference number: 4 (lower is better)
Translates to: VSPIAPEGGQSGSFWLFQPLVSQ*PASQSQ
Trigger: TTGGGACTGTGAAGCCGGCCATTGTGAAACAAGAGG...TTGGAAGAGCCAGAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450650.5
CDS-3UTR CCA 90 bp TCTGCAAACACCCAGTGGACAGCTCTTGTGTCACCCATAGCACCCGAGGGTGGTACTGTGAGGACCATTTaGATTCCTCTGTGGGAGATG +
Preference number: 4 (lower is better)
Translates to: SANTQWTALVSPIAPEGGTVRTI*IPLWEM
Trigger: CATCTCCCACAGAGGAATCCAAATGGTCCTCACAGT...ACCACCCTCGGGTGCTATGGGTGACACAAGAGCTGTCCACTGGGTGTTTGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450650.5
3UTR CAA 72 bp CAGCCAAGGACCGAACCCAGGCTGTTGGGAGACAGCTaGGACTCTGTTTCATGCAGGGCTGGTTTAGATTTA +
Preference number: 4 (lower is better)
Translates to: QPRTEPRLLGDS*DSVSCRAGLDL
Trigger: TAAATCTAAACCAGCCCTGCATGAAACAGAGTCCAAGCTGTCTCCCAACAGCCTGGGTTCGGTCCTTGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR TCA 90 bp CTGCTTCCTTTTCCAGGGCAACGTAGGCTGAATACATCCCAAAGTGCTCAGATGGATGGAGGTCTCCACTaGAGGCTCCTGGTAATACGC +
Preference number: 4 (lower is better)
Translates to: LLPFPGQRRLNTSQSAQMDGGLH*RLLVIR
Trigger: GCGTATTACCAGGAGCCTTCAGTGGAGACCTCCATC...CATCTGAGCACTTTGGGATGTATTCAGCCTACGTTGCCCTGGAAAAGGAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR TCA 90 bp AGGTGGCCGAGTAGGAGAAGGAAAGGTTTCACGGGGTACTGCCAATTGCTTGTTCTGTACTGTGGGTTCTaGGTCAAGGATCCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: RWPSRRRKGFTGYCQLLVLYCGF*VKDPSA
Trigger: AGCACTGGGATCCTTGACTCAGAACCCACAGTACAG...AACAAGCAATTGGCAGTACCCCGTGAAACCTTTCCTTCTCCTACTCGGCCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR TCA 90 bp GCAAACACCCAGTGGACAGCTCTTGTGTCACCCATAGCACCCGAGGGTGGTCAAGATGGTAAGTCATGGTaGAGTTGCGGCGGAATTTAT +
Preference number: 4 (lower is better)
Translates to: ANTQWTALVSPIAPEGGQDGKSW*SCGGIY
Trigger: ATAAATTCCGCCGCAACTTCACCATGACTTACCATC...TTGACCACCCTCGGGTGCTATGGGTGACACAAGAGCTGTCCACTGGGTGTTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR TCA 90 bp TGTGTCACCCATAGCACCCGAGGGTGGTCAAAGTGGCTCATTCTGGCTCTTCCAAATGAATCCAACTGGTaGCAGGGGACTCAGAGACAA +
Preference number: 4 (lower is better)
Translates to: CVTHSTRGWSKWLILALPNESNW*QGTQRQ
Trigger: TTGTCTCTGAGTCCCCTGTCACCAGTTGGATTCATT...TGGAAGAGCCAGAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR GCA 90 bp GCTGAATACATCCCAAAGTGCTCAGATGAGCTGCTTGGTGGCCACAGGCTTAACAGTGCTCAGATGAGCTaGTTGGTGGCCACAGGCTTA +
Preference number: 4 (lower is better)
Translates to: AEYIPKCSDELLGGHRLNSAQMS*LVATGL
Trigger: TAAGCCTGTGGCCACCAAGCAGCTCATCTGAGCACT...GTTAAGCCTGTGGCCACCAAGCAGCTCATCTGAGCACTTTGGGATGTATTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR GCA 90 bp CCTTCTGGAAAACATGCTGGTAGTGAACAAGGCGCTTCCACAGTCGCGCAAACTCAGGGAGACATCTCCTaGTTCCTTTTCCAGGGCAAC +
Preference number: 4 (lower is better)
Translates to: PSGKHAGSEQGASTVAQTQGDIS*FLFQGN
Trigger: GTTGCCCTGGAAAAGGAAGCAGGAGATGTCTCCCTG...AGTTTGCGCGACTGTGGAAGCGCCTTGTTCACTACCAGCATGTTTTCCAGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450650.5
CDS-3UTR GCA 90 bp TTGTTTCACAATGGCCGGCTTCACAGTCCCAATTCAGCCTTGTCAACGGTGCAGATGCTGGGGTGCAACTaGTGTGTAGACCAGGCAGTT +
Preference number: 4 (lower is better)
Translates to: LFHNGRLHSPNSALSTVQMLGCN*CVDQAV
Trigger: AACTGCCTGGTCTACACAGCAGTTGCACCCCAGCAT...CTGCACCGTTGACAAGGCTGAATTGGGACTGTGAAGCCGGCCATTGTGAAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450650.5
CDS-3UTR CCA 90 bp GGCATCCTCGAGGAAGCCATAGTGCAGATCGGAATAGGATCCGAGCAGCTTGGCGCTTCCATATCACATTaGAGAGGCGTTTTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: GILEEAIVQIGIGSEQLGASISH*RGVFPG
Trigger: TCCAGGAAAAACGCCTCTCCAATGTGATATGGAAGC...GCCAAGCTGCTCGGATCCTATTCCGATCTGCACTATGGCTTCCTCGAGGATGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485248.2
CDS-3UTR CCA 90 bp CTGCTTCCTTTTCCAGGGCAACGTAGGCTGAATACATCCCAAAGTGCTCAGATGTTGGCCCACTTGGAGTaGCACAGGTTATCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: LLPFPGQRRLNTSQSAQMLAHLE*HRLSGS
Trigger: GCTCCCTGATAACCTGTGCCACTCCAAGTGGGCCAA...CATCTGAGCACTTTGGGATGTATTCAGCCTACGTTGCCCTGGAAAAGGAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR CCA 90 bp TGTGTCACCCATAGCACCCGAGGGTGGTCAAAGTGGCTCATTCTGGCTCTTCCAGTGCCTGTCACTGTCTaGCATTTTCAGGAAGATTCG +
Preference number: 4 (lower is better)
Translates to: CVTHSTRGWSKWLILALPVPVTV*HFQEDS
Trigger: CGAATCTTCCTGAAAATGCCAGACAGTGACAGGCAC...TGGAAGAGCCAGAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR CCA 90 bp GGAGGTGGCCGAGTAGGAGAAGGAAAGGTTTCACGGGGTACTGCCAATTGCTTGGTGCCTGTCACTGTCTaGCATTTTCAGGAAGATTCG +
Preference number: 4 (lower is better)
Translates to: GGGRVGEGKVSRGTANCLVPVTV*HFQEDS
Trigger: CGAATCTTCCTGAAAATGCCAGACAGTGACAGGCAC...CAAGCAATTGGCAGTACCCCGTGAAACCTTTCCTTCTCCTACTCGGCCACCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR CCA 90 bp ACAGCTCTTGTGTCACCCATAGCACCCGAGGGTGGTCAAAGTGGCTCATTCTGGATTCTGAGGTTGAAATaGCTGCTCAGGTGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: TALVSPIAPEGGQSGSFWILRLK*LLRCLS
Trigger: TGACAGGCACCTGAGCAGCCATTTCAACCTCAGAAT...CCAGAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACACAAGAGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR CCA 90 bp GGAAAACATGCTGGTAGTGAACAAGGCGCTTCCACAGTCGCGCAAACTCCTCTTGGAAGGTCTTTGCCATaGCTTCAAGCCGCATCAGGA +
Preference number: 4 (lower is better)
Translates to: GKHAGSEQGASTVAQTPLGRSLP*LQAASG
Trigger: TCCTGATGCGGCTTGAAGCCATGGCAAAGACCTTCC...AAGAGGAGTTTGCGCGACTGTGGAAGCGCCTTGTTCACTACCAGCATGTTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450650.5
CDS-3UTR CCA 90 bp TGGACAGCTCTTGTGTCACCCATAGCACCCGAGGGTGGTCAAAGTGGCTCATTCTTCTTGAGTGATCACTaGGAGCTTGTCCTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: WTALVSPIAPEGGQSGSFFLSDH*ELVLSH
Trigger: ATGGCTCAGGACAAGCTCCCAGTGATCACTCAAGAA...GAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACACAAGAGCTGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR CCA 90 bp GGTGCCTGTCACTGTCTGGCATTTTCAGGAAGATTCGGAGCAAGAACTCCGCTGCTGTGTGCACATAGGTaGTTTGGCAGCAAGGATGCT +
Preference number: 4 (lower is better)
Translates to: GACHCLAFSGRFGARTPLLCAHR*FGSKDA
Trigger: AGCATCCTTGCTGCCAAACCACCTATGTGCACACAG...CAGCGGAGTTCTTGCTCCGAATCTTCCTGAAAATGCCAGACAGTGACAGGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR TCA 90 bp GATCCAGGAAGAGAGGCAGGTAAAATAGTCCATCAAGTCACTTCTCCTCTCTGCTCATCCAGGATGAAGTaGGGAGGACCCCCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: DPGREAGKIVHQVTSPLCSSRMK*GGPPGR
Trigger: TCTACCAGGGGGTCCTCCTCACTTCATCCTGGATGA...GCAGAGAGGAGAAGTGACTTGATGGACTATTTTACCTGCCTCTCTTCCTGGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR TCA 90 bp ACAGCTCTTGTGTCACCCATAGCACCCGAGGGTGGTCAAAGTGGCTCATTCTGGCTTGCACAGAGAAGTTaGATTGAGCATCATTCCGAG +
Preference number: 4 (lower is better)
Translates to: TALVSPIAPEGGQSGSFWLAQRS*IEHHSE
Trigger: CTCGGAATGATGCTCAATTCAACTTCTCTGTGCAAG...CCAGAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACACAAGAGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR TCA 90 bp TTCACAATGGCCGGCTTCACAGTCCCAATTCAGCCTTGTCAACGGTGCAGGAGCGATGGTAAGTCATGGTaGAGTTGCGGCGGAATTTAT +
Preference number: 4 (lower is better)
Translates to: FTMAGFTVPIQPCQRCRSDGKSW*SCGGIY
Trigger: ATAAATTCCGCCGCAACTTCACCATGACTTACCATC...GCTCCTGCACCGTTGACAAGGCTGAATTGGGACTGTGAAGCCGGCCATTGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450650.5
CDS-3UTR TCA 90 bp GTGTCACCCATAGCACCCGAGGGTGGTCAAAGTGGCTCATTCTGGCTCTTCCAAATGTCCAGCCTCTGCTaGGCATATCTGTTGAAAATG +
Preference number: 4 (lower is better)
Translates to: VSPIAPEGGQSGSFWLFQMSSLC*AYLLKM
Trigger: CATTTTCAACAGATATGCTCAGCAGAGGCTGGACAT...TTGGAAGAGCCAGAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR TCA 90 bp TGTGTCACCCATAGCACCCGAGGGTGGTCAAAGTGGCTCATTCTGGCTCTTCCAATGTCCAGCCTCTGCTaGGCATATCTGTTGAAAATG +
Preference number: 4 (lower is better)
Translates to: CVTHSTRGWSKWLILALPMSSLC*AYLLKM
Trigger: CATTTTCAACAGATATGCTCAGCAGAGGCTGGACAT...TGGAAGAGCCAGAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR TCA 90 bp GGATTCCTCTGTGGGAGATGGGCTGTGTCTCTGATAGATTCCAAAGCACAGCCATGCTTCAGTTGTACATaGCCAGGCTCATCCACTCCA +
Preference number: 4 (lower is better)
Translates to: GFLCGRWAVSLIDSKAQPCFSCT*PGSSTP
Trigger: TGGAGTGGATGAGCCTGGTCATGTACAACTGAAGCA...TGGCTGTGCTTTGGAATCTATCAGAGACACAGCCCATCTCCCACAGAGGAATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450650.5
CDS-3UTR TCA 90 bp AGGCTGAATACATCCCAAAGTGCTCAGATGAGCTGCTTGGTGGCCACAGGCTTAAGCCAGATTCTTGAGTaGTCACTGGGAGCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: RLNTSQSAQMSCLVATGLSQILE*SLGACP
Trigger: AGGACAAGCTCCCAGTGATCACTCAAGAATCTGGCT...TAAGCCTGTGGCCACCAAGCAGCTCATCTGAGCACTTTGGGATGTATTCAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR TCA 90 bp AGGCTGAATACATCCCAAAGTGCTCAGATGAGCTGCTTGGTGGCCACAGGCTTAGGCTCTTCCAAGAAATaGATCCAACTGGTGACAGGG +
Preference number: 4 (lower is better)
Translates to: RLNTSQSAQMSCLVATGLGSSKK*IQLVTG
Trigger: CCCTGTCACCAGTTGGATTCATTTCTTGGAAGAGCC...TAAGCCTGTGGCCACCAAGCAGCTCATCTGAGCACTTTGGGATGTATTCAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR GCA 90 bp CTCCTGCTTCCTTTTCCAGGGCAACGTAGGCTGAATACATCCCAAAGTGCTCAGTCCACAGGGGAAGAGTaGAGATGGATGTTGGTGATC +
Preference number: 4 (lower is better)
Translates to: LLLPFPGQRRLNTSQSAQSTGEE*RWMLVI
Trigger: GATCACCAACATCCATCTGCACTCTTCCCCTGTGGA...CTGAGCACTTTGGGATGTATTCAGCCTACGTTGCCCTGGAAAAGGAAGCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR GCA 90 bp CTGCTTCCTTTTCCAGGGCAACGTAGGCTGAATACATCCCAAAGTGCTCAGATGTCAGAGCCACCAAGCTaGGGCACTCATCTAAGGAGA +
Preference number: 4 (lower is better)
Translates to: LLPFPGQRRLNTSQSAQMSEPPS*GTHLRR
Trigger: TCTCCTTAGATGAGTGCCGCAGCTTGGTGGCTCTGA...CATCTGAGCACTTTGGGATGTATTCAGCCTACGTTGCCCTGGAAAAGGAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR GCA 90 bp TTAGATTTATCACAACCACCATACTGGGCAGCACAGCCTCTTAGAATGAGAGCCCTGAGGGTCACCAGATaGAGCAGCTCACGGCTGATG +
Preference number: 4 (lower is better)
Translates to: LDLSQPPYWAAQPLRMRALRVTR*SSSRLM
Trigger: CATCAGCCGTGAGCTGCTGCATCTGGTGACCCTCAG...GGCTCTCATTCTAAGAGGCTGTGCTGCCCAGTATGGTGGTTGTGATAAATCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR GCA 90 bp TTTCCAGGGCAACGTAGGCTGAATACATCCCAAAGTGCTCAGATGAGCTGCTTGAGTGCTCAGATGAGCTaGTTGGTGGCCACAGGCTTA +
Preference number: 4 (lower is better)
Translates to: FPGQRRLNTSQSAQMSCLSAQMS*LVATGL
Trigger: TAAGCCTGTGGCCACCAAGCAGCTCATCTGAGCACT...CAAGCAGCTCATCTGAGCACTTTGGGATGTATTCAGCCTACGTTGCCCTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR GCA 90 bp TGTGTCACCCATAGCACCCGAGGGTGGTCAAAGTGGCTCATTCTGGCTCTTCCAGAATACATCCCAAAGTaGTCAGATGAGCTGCTTGGT +
Preference number: 4 (lower is better)
Translates to: CVTHSTRGWSKWLILALPEYIPK*SDELLG
Trigger: ACCAAGCAGCTCATCTGAGCACTTTGGGATGTATTC...TGGAAGAGCCAGAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR GCA 90 bp GCTGAATACATCCCAAAGTGCTCAGATGAGCTGCTTGGTGGCCACAGGCTTAACATAGCAATGCTGGGGTaGAACTGCTGTGTAGACCAG +
Preference number: 4 (lower is better)
Translates to: AEYIPKCSDELLGGHRLNIAMLG*NCCVDQ
Trigger: CTGGTCTACACAGCAGTTGCACCCCAGCATTGCTAT...GTTAAGCCTGTGGCCACCAAGCAGCTCATCTGAGCACTTTGGGATGTATTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450650.5
CDS-3UTR GCA 90 bp TCTCCAGCAGGCAGGGCCAGAACTCTTGGTTTTGGTGGCGAGGACGCACAAAGATCTGGTATAAACTTTTaGAGCAAGTCACTCACCGGT +
Preference number: 4 (lower is better)
Translates to: SPAGRARTLGFGGEDAQRSGINF*SKSLTG
Trigger: ACCGGTGAGTGACTTGCTGCAAAAGTTTATACCAGA...TCTTTGTGCGTCCTCGCCACCAAAACCAAGAGTTCTGGCCCTGCCTGCTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485248.2
CDS-3UTR CCA 90 bp AGGCTGAATACATCCCAAAGTGCTCAGATGAGCTGCTTGGTGGCCACAGGCTTATCCTGGAGCAGCTTCTaGCCTATGGAAGAATCTGCT +
Preference number: 4 (lower is better)
Translates to: RLNTSQSAQMSCLVATGLSWSSF*PMEESA
Trigger: AGCAGATTCTTCCATAGGCCAGAAGCTGCTCCAGGA...TAAGCCTGTGGCCACCAAGCAGCTCATCTGAGCACTTTGGGATGTATTCAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR CCA 90 bp CTGAATACATCCCAAAGTGCTCAGATGAGCTGCTTGGTGGCCACAGGCTTAACTGAGAGGCGTTTTTCCTaGAGCAGCTTCTGGCCTATG +
Preference number: 4 (lower is better)
Translates to: LNTSQSAQMSCLVATGLTERRFS*SSFWPM
Trigger: CATAGGCCAGAAGCTGCTCCAGGAAAAACGCCTCTC...AGTTAAGCCTGTGGCCACCAAGCAGCTCATCTGAGCACTTTGGGATGTATTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR CCA 90 bp ATGGCTGCTCAGGTGCCTGTCACTGTCTGGCATTTTCAGGAAGATTCGGAGCAACTTCTGCCTGTACTGTaGGTTCTGAGTCAAGGATCC +
Preference number: 4 (lower is better)
Translates to: MAAQVPVTVWHFQEDSEQLLPVL*VLSQGS
Trigger: GGATCCTTGACTCAGAACCCACAGTACAGGCAGAAG...TTGCTCCGAATCTTCCTGAAAATGCCAGACAGTGACAGGCACCTGAGCAGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR CCA 90 bp AGGGCCAGAACTCTTGGTTTTGGTGGCGAGGACGCACAAAGAGGCATTTATCTCAGGCATTTATCTCCCTaGACAGGTAGGCGGTCATCA +
Preference number: 4 (lower is better)
Translates to: RARTLGFGGEDAQRGIYLRHLSP*TGRRSS
Trigger: TGATGACCGCCTACCTGTCCAGGGAGATAAATGCCT...GAGATAAATGCCTCTTTGTGCGTCCTCGCCACCAAAACCAAGAGTTCTGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485248.2
CDS-3UTR CCA 90 bp ATCCTCGAGGAAGCCATAGTGCAGATCGGAATAGGATCCGAGCAGCTTGGCATACAGAACTCTTGGTTTTaGTGGCGAGGACGCACAAAG +
Preference number: 4 (lower is better)
Translates to: ILEEAIVQIGIGSEQLGIQNSWF*WRGRTK
Trigger: CTTTGTGCGTCCTCGCCACCAAAACCAAGAGTTCTG...TATGCCAAGCTGCTCGGATCCTATTCCGATCTGCACTATGGCTTCCTCGAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485248.2
CDS-3UTR CCA 90 bp CAACCACCATACTGGGCAGCACAGCCTCTTAGAATGAGAGCCAGATTCTTGAGTCTGTGCTGTATCTGTTaGCCCACTTGGAGTGGCACA +
Preference number: 4 (lower is better)
Translates to: QPPYWAAQPLRMRARFLSLCCIC*PTWSGT
Trigger: TGTGCCACTCCAAGTGGGCCAACAGATACAGCACAG...ACTCAAGAATCTGGCTCTCATTCTAAGAGGCTGTGCTGCCCAGTATGGTGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR CCA 90 bp CTGCTCAGGTGCCTGTCACTGTCTGGCATTTTCAGGAAGATTCGGAGCAAGAACCGCACACGACAACATTaGTGCCTTCCATTGGCTCTT +
Preference number: 4 (lower is better)
Translates to: LLRCLSLSGIFRKIRSKNRTRQH*CLPLAL
Trigger: AAGAGCCAATGGAAGGCACCAATGTTGTCGTGTGCG...GTTCTTGCTCCGAATCTTCCTGAAAATGCCAGACAGTGACAGGCACCTGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR CCA 90 bp CTTAGAATGAGAGCCAGATTCTTGAGTGATCACTGGGAGCTTGTCCTGAGCCATCGCGCAAACTCCTCTTaGTCTAGCCGCCCATTCACT +
Preference number: 4 (lower is better)
Translates to: LRMRARFLSDHWELVLSHRANSS*SSRPFT
Trigger: AGTGAATGGGCGGCTAGACCAAGAGGAGTTTGCGCG...ATGGCTCAGGACAAGCTCCCAGTGATCACTCAAGAATCTGGCTCTCATTCTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR CCA 90 bp CTGCTTCCTTTTCCAGGGCAACGTAGGCTGAATACATCCCAAAGTGCTCAGATGGGAAGGTCTTTGCCATaGCTTCAAGCCGCATCAGGA +
Preference number: 4 (lower is better)
Translates to: LLPFPGQRRLNTSQSAQMGRSLP*LQAASG
Trigger: TCCTGATGCGGCTTGAAGCCATGGCAAAGACCTTCC...CATCTGAGCACTTTGGGATGTATTCAGCCTACGTTGCCCTGGAAAAGGAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR CCA 90 bp CTGCTTCCTTTTCCAGGGCAACGTAGGCTGAATACATCCCAAAGTGCTCAGATGGCTTGTCCTGAGCCATaGGTCTGCTTTCCTCTTTGC +
Preference number: 4 (lower is better)
Translates to: LLPFPGQRRLNTSQSAQMACPEP*VCFPLC
Trigger: GCAAAGAGGAAAGCAGACCCATGGCTCAGGACAAGC...CATCTGAGCACTTTGGGATGTATTCAGCCTACGTTGCCCTGGAAAAGGAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACCCCAGTACACTGATCAGCACATAGTAGGTGCTTGTCCTGAGCCATaGGTCTGCTTTCCTCTTTGC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTPQYTDQHIVGACPEP*VCFPLC
Trigger: GCAAAGAGGAAAGCAGACCCATGGCTCAGGACAAGC...ACCTACTATGTGCTGATCAGTGTACTGGGGTGTGTGTGTGTGTGTGTGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450650.5
CDS-3UTR CCA 90 bp TTTCCAGGGCAACGTAGGCTGAATACATCCCAAAGTGCTCAGATGAGCTGCTTGCGAGGGTGGTCAAAGTaGCTCATTCTGGCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: FPGQRRLNTSQSAQMSCLRGWSK*LILALP
Trigger: TGGAAGAGCCAGAATGAGCCACTTTGACCACCCTCG...CAAGCAGCTCATCTGAGCACTTTGGGATGTATTCAGCCTACGTTGCCCTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR CCA 90 bp TTTCCAGGGCAACGTAGGCTGAATACATCCCAAAGTGCTCAGATGAGCTGCTTGCATAGCACCCGAGGGTaGTCAAAGTGGCTCATTCTG +
Preference number: 4 (lower is better)
Translates to: FPGQRRLNTSQSAQMSCLHSTRG*SKWLIL
Trigger: CAGAATGAGCCACTTTGACCACCCTCGGGTGCTATG...CAAGCAGCTCATCTGAGCACTTTGGGATGTATTCAGCCTACGTTGCCCTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR CCA 90 bp CAGCCTCTTAGAATGAGAGCCAGATTCTTGAGTGATCACTGGGAGCTTGTCCTGTCTGCAAACACCCAGTaGACAGCTCTTGTGTCACCC +
Preference number: 4 (lower is better)
Translates to: QPLRMRARFLSDHWELVLSANTQ*TALVSP
Trigger: GGGTGACACAAGAGCTGTCCACTGGGTGTTTGCAGA...CAGGACAAGCTCCCAGTGATCACTCAAGAATCTGGCTCTCATTCTAAGAGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACCCCAGTACACTGATCAGCACATAGTAGGTGGGGGTCTACACTCATaGAGTCAGCCTCTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTPQYTDQHIVGGGLHS*SQPLLL
Trigger: AAGCAGAAGAGGCTGACTCCATGAGTGTAGACCCCC...ACCTACTATGTGCTGATCAGTGTACTGGGGTGTGTGTGTGTGTGTGTGTGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450650.5
CDS-3UTR CCA 90 bp CTTCTCCAGCAGGCAGGGCCAGAACTCTTGGTTTTGGTGGCGAGGACGCACAAAACTGCGCCTCCTTGTTaGATGTCAAATCTGCTTATA +
Preference number: 4 (lower is better)
Translates to: LLQQAGPELLVLVARTHKTAPPC*MSNLLI
Trigger: TATAAGCAGATTTGACATCCAACAAGGAGGCGCAGT...TTTGTGCGTCCTCGCCACCAAAACCAAGAGTTCTGGCCCTGCCTGCTGGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485248.2
CDS-3UTR TCA 90 bp GCTGAATACATCCCAAAGTGCTCAGATGAGCTGCTTGGTGGCCACAGGCTTAACCCTGGTAATACGCCATaGCTCTCCTTAGAAGACTTC +
Preference number: 4 (lower is better)
Translates to: AEYIPKCSDELLGGHRLNPGNTP*LSLEDF
Trigger: GAAGTCTTCTAAGGAGAGTCATGGCGTATTACCAGG...GTTAAGCCTGTGGCCACCAAGCAGCTCATCTGAGCACTTTGGGATGTATTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR TCA 90 bp CAGGGCCAGAACTCTTGGTTTTGGTGGCGAGGACGCACAAAGAGGCATTTATCTCCTGGTAATACGCCATaGCTCTCCTTAGAAGACTTC +
Preference number: 4 (lower is better)
Translates to: QGQNSWFWWRGRTKRHLSPGNTP*LSLEDF
Trigger: GAAGTCTTCTAAGGAGAGTCATGGCGTATTACCAGG...AGATAAATGCCTCTTTGTGCGTCCTCGCCACCAAAACCAAGAGTTCTGGCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485248.2
CDS-3UTR TCA 90 bp CTGCTTCCTTTTCCAGGGCAACGTAGGCTGAATACATCCCAAAGTGCTCAGATGGCCAGCATACTGGTGTaGAAAGCTTTGGACCATCAG +
Preference number: 4 (lower is better)
Translates to: LLPFPGQRRLNTSQSAQMASILV*KALDHQ
Trigger: CTGATGGTCCAAAGCTTTTCACACCAGTATGCTGGC...CATCTGAGCACTTTGGGATGTATTCAGCCTACGTTGCCCTGGAAAAGGAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR TCA 90 bp AAAAAGCCCTCTTGTTTCACAATGGCCGGCTTCACAGTCCCAATTCAGCCTTGTGAGCAAGAACTCCGCTaGTTTTCTCCGTGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: KKPSCFTMAGFTVPIQPCEQELR*FSPCLC
Trigger: GCACAGACACGGAGAAAATCAGCGGAGTTCTTGCTC...ACAAGGCTGAATTGGGACTGTGAAGCCGGCCATTGTGAAACAAGAGGGCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450650.5
CDS-3UTR TCA 90 bp CTGAATACATCCCAAAGTGCTCAGATGAGCTGCTTGGTGGCCACAGGCTTAACTTGCTTCAGTTGTACATaGCCAGGCTCATCCACTCCA +
Preference number: 4 (lower is better)
Translates to: LNTSQSAQMSCLVATGLTCFSCT*PGSSTP
Trigger: TGGAGTGGATGAGCCTGGTCATGTACAACTGAAGCA...AGTTAAGCCTGTGGCCACCAAGCAGCTCATCTGAGCACTTTGGGATGTATTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR TCA 90 bp GAGAGGTTGCGGAAGGTCTTTGCCATGGCTTCAAGCCGCATCAGGAAGCAGACCAGCAGAGACAGGGCCTaGTTTATGATTTCATCAAAA +
Preference number: 4 (lower is better)
Translates to: ERLRKVFAMASSRIRKQTSRDRA*FMISSK
Trigger: TTTTGATGAAATCATAAATCAGGCCCTGTCTCTGCT...GGTCTGCTTCCTGATGCGGCTTGAAGCCATGGCAAAGACCTTCCGCAACCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450650.5
CDS-3UTR GCA 90 bp GCTGAATACATCCCAAAGTGCTCAGATGAGCTGCTTGGTGGCCACAGGCTTAACGCCTATGGAAGAATCTaGTGCAGGGAATGTCTCATC +
Preference number: 4 (lower is better)
Translates to: AEYIPKCSDELLGGHRLNAYGRI*CRECLI
Trigger: GATGAGACATTCCCTGCAGCAGATTCTTCCATAGGC...GTTAAGCCTGTGGCCACCAAGCAGCTCATCTGAGCACTTTGGGATGTATTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR GCA 90 bp GGTACTGCCAATTGCTTGTTTAAAGATTTAGAGGGCAATGCACCTCACACCCCAGAACCAGCAGTCAGCTaGGCCTCCTTGTTGGATGTC +
Preference number: 4 (lower is better)
Translates to: GTANCLFKDLEGNAPHTPEPAVS*ASLLDV
Trigger: GACATCCAACAAGGAGGCGCAGCTGACTGCTGGTTC...TGGGGTGTGAGGTGCATTGCCCTCTAAATCTTTAAACAAGCAATTGGCAGTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR GCA 90 bp CTGAATACATCCCAAAGTGCTCAGATGAGCTGCTTGGTGGCCACAGGCTTAACTATTCTCCATCGCCTGTaGTGTATCTGTTGGCCCACT +
Preference number: 4 (lower is better)
Translates to: LNTSQSAQMSCLVATGLTILHRL*CICWPT
Trigger: AGTGGGCCAACAGATACAGCACAGGCGATGGAGAAT...AGTTAAGCCTGTGGCCACCAAGCAGCTCATCTGAGCACTTTGGGATGTATTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR GCA 90 bp TCTTGTGTCACCCATAGCACCCGAGGGTGGTCAAAGTGGCTCATTCTGGCTCTTTTTTCTCCGTGTCTGTaGAACCACAACATAGTTCCC +
Preference number: 4 (lower is better)
Translates to: SCVTHSTRGWSKWLILALFSPCL*NHNIVP
Trigger: GGGAACTATGTTGTGGTTGCACAGACACGGAGAAAA...AAGAGCCAGAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACACAAGA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR GCA 90 bp CTTGTCCTGAGCCATGGGTCTGCTTTCCTCTTTGCTTCAGTTGTACATGACCAGAAATGGCTGCTCAGGTaGCTGTCACTGTCTGGCATT +
Preference number: 4 (lower is better)
Translates to: LVLSHGSAFLFASVVHDQKWLLR*LSLSGI
Trigger: AATGCCAGACAGTGACAGGCACCTGAGCAGCCATTT...CTGGTCATGTACAACTGAAGCAAAGAGGAAAGCAGACCCATGGCTCAGGACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450650.5
CDS-3UTR GCA 90 bp GTCACCAGATGCAGCAGCTCACGGCTGATGAAGATCCCTCTGAGGAAGTCTGTAGAATACATCCCAAAGTaGTCAGATGAGCTGCTTGGT +
Preference number: 4 (lower is better)
Translates to: VTRCSSSRLMKIPLRKSVEYIPK*SDELLG
Trigger: ACCAAGCAGCTCATCTGAGCACTTTGGGATGTATTC...TACAGACTTCCTCAGAGGGATCTTCATCAGCCGTGAGCTGCTGCATCTGGTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450650.5
CDS-3UTR CCA 90 bp GATCCAGGAAGAGAGGCAGGTAAAATAGTCCATCAAGTCACTTCTCCTCTCTGCGCAGCTTCTGGCCTATaGAAGAATCTGCTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: DPGREAGKIVHQVTSPLCAASGL*KNLLQG
Trigger: TCCCTGCAGCAGATTCTTCCATAGGCCAGAAGCTGC...GCAGAGAGGAGAAGTGACTTGATGGACTATTTTACCTGCCTCTCTTCCTGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR CCA 90 bp AGAACTCTTGGTTTTGGTGGCGAGGACGCACAAAGAGGCATTTATCTCCCTGGATCCTGGAGCAGCTTCTaGCCTATGGAAGAATCTGCT +
Preference number: 4 (lower is better)
Translates to: RTLGFGGEDAQRGIYLPGSWSSF*PMEESA
Trigger: AGCAGATTCTTCCATAGGCCAGAAGCTGCTCCAGGA...TCCAGGGAGATAAATGCCTCTTTGTGCGTCCTCGCCACCAAAACCAAGAGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485248.2
CDS-3UTR CCA 90 bp GGTACTGCCAATTGCTTGTTTAAAGATTTAGAGGGCAATGCACCTCACACCCCAAGGATCCGAGCAGCTTaGCATAGGCCTTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: GTANCLFKDLEGNAPHTPRIRAA*HRPSPA
Trigger: TGCTGGAGAAGGCCTATGCCAAGCTGCTCGGATCCT...TGGGGTGTGAGGTGCATTGCCCTCTAAATCTTTAAACAAGCAATTGGCAGTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR CCA 90 bp AGGTGGCCGAGTAGGAGAAGGAAAGGTTTCACGGGGTACTGCCAATTGCTTGTTCGTTTCTTATGTAGCTaGCTTTTCCGCGGATCACAG +
Preference number: 4 (lower is better)
Translates to: RWPSRRRKGFTGYCQLLVRFLCS*LFRGSQ
Trigger: CTGTGATCCGCGGAAAAGCCAGCTACATAAGAAACG...AACAAGCAATTGGCAGTACCCCGTGAAACCTTTCCTTCTCCTACTCGGCCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR CCA 90 bp CTGGGCCAGCCAAGGACCGAACCCAGGCTGTTGGGAGACAGCTTGGACTCTGTTATGGTCCAGGGTAATTaGAATTTCGCTACATATAAA +
Preference number: 4 (lower is better)
Translates to: LGQPRTEPRLLGDSLDSVMVQGN*NFATYK
Trigger: TTTATATGTAGCGAAATTCCAATTACCCTGGACCAT...AACAGAGTCCAAGCTGTCTCCCAACAGCCTGGGTTCGGTCCTTGGCTGGCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR CCA 90 bp TGTATGTGCTTTCTGAAGCTGGCTAGCTCCCGGGAGGAACGATGCCAGGTTGGTTGGAGTGTGTTTCCATaGTCCAGGGTAATTGGAATT +
Preference number: 4 (lower is better)
Translates to: CMCFLKLASSREERCQVGWSVFP*SRVIGI
Trigger: AATTCCAATTACCCTGGACCATGGAAACACACTCCA...ACCAACCTGGCATCGTTCCTCCCGGGAGCTAGCCAGCTTCAGAAAGCACATACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR CCA 90 bp TTTCCAGGGCAACGTAGGCTGAATACATCCCAAAGTGCTCAGATGAGCTGCTTGCGCACACGACAACATTaGTGCCTTCCATTGGCTCTT +
Preference number: 4 (lower is better)
Translates to: FPGQRRLNTSQSAQMSCLRTRQH*CLPLAL
Trigger: AAGAGCCAATGGAAGGCACCAATGTTGTCGTGTGCG...CAAGCAGCTCATCTGAGCACTTTGGGATGTATTCAGCCTACGTTGCCCTGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR CCA 90 bp TTATCACAACCACCATACTGGGCAGCACAGCCTCTTAGAATGAGAGCCAGATTCCGAGGGTGGTCAAAGTaGCTCATTCTGGCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: LSQPPYWAAQPLRMRARFRGWSK*LILALP
Trigger: TGGAAGAGCCAGAATGAGCCACTTTGACCACCCTCG...GAATCTGGCTCTCATTCTAAGAGGCTGTGCTGCCCAGTATGGTGGTTGTGATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR TCA 90 bp CTGCTCAGGTGCCTGTCACTGTCTGGCATTTTCAGGAAGATTCGGAGCAAGAACACAGAGAAGTTGAATTaGGCATCATTCCGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: LLRCLSLSGIFRKIRSKNTEKLN*ASFRGP
Trigger: AGGACCTCGGAATGATGCTCAATTCAACTTCTCTGT...GTTCTTGCTCCGAATCTTCCTGAAAATGCCAGACAGTGACAGGCACCTGAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR TCA 90 bp AGGTGGCCGAGTAGGAGAAGGAAAGGTTTCACGGGGTACTGCCAATTGCTTGTTGCTGAGCATATCTGTTaGAAATGCTTTGTTGGGAGC +
Preference number: 4 (lower is better)
Translates to: RWPSRRRKGFTGYCQLLVAEHIC*KCFVGS
Trigger: GCTCCCAACAAAGCATTTTCAACAGATATGCTCAGC...AACAAGCAATTGGCAGTACCCCGTGAAACCTTTCCTTCTCCTACTCGGCCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR TCA 90 bp TTCACAATGGCCGGCTTCACAGTCCCAATTCAGCCTTGTCAACGGTGCAGGAGCGGTAGTTATCTTGATTaGATTGGGGACTTGTTGAAG +
Preference number: 4 (lower is better)
Translates to: FTMAGFTVPIQPCQRCRSGSYLD*IGDLLK
Trigger: CTTCAACAAGTCCCCAATTCAATCAAGATAACTACC...GCTCCTGCACCGTTGACAAGGCTGAATTGGGACTGTGAAGCCGGCCATTGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450650.5
CDS-3UTR GCA 90 bp AGAACTCTTGGTTTTGGTGGCGAGGACGCACAAAGAGGCATTTATCTCCCTGGAGCCTATGGAAGAATCTaGTGCAGGGAATGTCTCATC +
Preference number: 4 (lower is better)
Translates to: RTLGFGGEDAQRGIYLPGAYGRI*CRECLI
Trigger: GATGAGACATTCCCTGCAGCAGATTCTTCCATAGGC...TCCAGGGAGATAAATGCCTCTTTGTGCGTCCTCGCCACCAAAACCAAGAGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485248.2
CDS-3UTR GCA 90 bp GGTACTGCCAATTGCTTGTTTAAAGATTTAGAGGGCAATGCACCTCACACCCCAACCCACTGGCCACATTaGCAGAACCGGAAACGGAAA +
Preference number: 4 (lower is better)
Translates to: GTANCLFKDLEGNAPHTPTHWPH*QNRKRK
Trigger: TTTCCGTTTCCGGTTCTGGCAATGTGGCCAGTGGGT...TGGGGTGTGAGGTGCATTGCCCTCTAAATCTTTAAACAAGCAATTGGCAGTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR GCA 90 bp TGGACAGCTCTTGTGTCACCCATAGCACCCGAGGGTGGTCAAAGTGGCTCATTCTTGGACTCTGTTTCATaGAGGGCTGGTTTAGATTTA +
Preference number: 4 (lower is better)
Translates to: WTALVSPIAPEGGQSGSFLDSVS*RAGLDL
Trigger: TAAATCTAAACCAGCCCTGCATGAAACAGAGTCCAA...GAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACACAAGAGCTGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR GCA 90 bp TCTCCAGCAGGCAGGGCCAGAACTCTTGGTTTTGGTGGCGAGGACGCACAAAGATCCAGCTCTGTCATTTaGATCTGGTATAAACTTTTG +
Preference number: 4 (lower is better)
Translates to: SPAGRARTLGFGGEDAQRSSSVI*IWYKLL
Trigger: CAAAAGTTTATACCAGATGCAAATGACAGAGCTGGA...TCTTTGTGCGTCCTCGCCACCAAAACCAAGAGTTCTGGCCCTGCCTGCTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485248.2
CDS-3UTR CCA 90 bp TTAGATTTATCACAACCACCATACTGGGCAGCACAGCCTCTTAGAATGAGAGCCTCTCAGGTTAGAGAGTaGTGGAGGAGACTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: LDLSQPPYWAAQPLRMRASQVRE*WRRLAE
Trigger: CTCTGCCAGTCTCCTCCACCACTCTCTAACCTGAGA...GGCTCTCATTCTAAGAGGCTGTGCTGCCCAGTATGGTGGTTGTGATAAATCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR CCA 90 bp CTCCTGCTTCCTTTTCCAGGGCAACGTAGGCTGAATACATCCCAAAGTGCTCAGGCTGCGCCTCCTTGTTaGATGTCAAATCTGCTTATA +
Preference number: 4 (lower is better)
Translates to: LLLPFPGQRRLNTSQSAQAAPPC*MSNLLI
Trigger: TATAAGCAGATTTGACATCCAACAAGGAGGCGCAGC...CTGAGCACTTTGGGATGTATTCAGCCTACGTTGCCCTGGAAAAGGAAGCAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR CCA 90 bp CCATTAAGGAAATCCTGTGTGCACATAGGTGGTTTGGCAGCAAGGATGCTGTATGGGGAAGAGTGCAGATaGATGTTGGTGATCACGCCT +
Preference number: 4 (lower is better)
Translates to: PLRKSCVHIGGLAARMLYGEECR*MLVITP
Trigger: AGGCGTGATCACCAACATCCATCTGCACTCTTCCCC...ATACAGCATCCTTGCTGCCAAACCACCTATGTGCACACAGGATTTCCTTAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR CCA 90 bp CAACCACCATACTGGGCAGCACAGCCTCTTAGAATGAGAGCCAGATTCTTGAGTATTCTGAGGTTGAAATaGCTGCTCAGGTGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: QPPYWAAQPLRMRARFLSILRLK*LLRCLS
Trigger: TGACAGGCACCTGAGCAGCCATTTCAACCTCAGAAT...ACTCAAGAATCTGGCTCTCATTCTAAGAGGCTGTGCTGCCCAGTATGGTGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR CCA 90 bp TTATCACAACCACCATACTGGGCAGCACAGCCTCTTAGAATGAGAGCCAGATTCTGTTGGGAGACAGCTTaGACTCTGTTTCATGCAGGG +
Preference number: 4 (lower is better)
Translates to: LSQPPYWAAQPLRMRARFCWETA*TLFHAG
Trigger: CCCTGCATGAAACAGAGTCCAAGCTGTCTCCCAACA...GAATCTGGCTCTCATTCTAAGAGGCTGTGCTGCCCAGTATGGTGGTTGTGATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR CCA 90 bp GTGTCACCCATAGCACCCGAGGGTGGTCAAAGTGGCTCATTCTGGCTCTTCCAACAAAGTGGCTCATTCTaGCTCTTCCAAGAAATGAAT +
Preference number: 4 (lower is better)
Translates to: VSPIAPEGGQSGSFWLFQQSGSF*LFQEMN
Trigger: ATTCATTTCTTGGAAGAGCCAGAATGAGCCACTTTG...TTGGAAGAGCCAGAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR CCA 90 bp ACAGCTCTTGTGTCACCCATAGCACCCGAGGGTGGTCAAAGTGGCTCATTCTGGCAAAGTGGCTCATTCTaGCTCTTCCAAGAAATGAAT +
Preference number: 4 (lower is better)
Translates to: TALVSPIAPEGGQSGSFWQSGSF*LFQEMN
Trigger: ATTCATTTCTTGGAAGAGCCAGAATGAGCCACTTTG...CCAGAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACACAAGAGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR CCA 90 bp CAGCCTCTTAGAATGAGAGCCAGATTCTTGAGTGATCACTGGGAGCTTGTCCTGCTGGGGTTCAATTCTTaGTCCTACACTTGTAGCCAC +
Preference number: 4 (lower is better)
Translates to: QPLRMRARFLSDHWELVLLGFNS*SYTCSH
Trigger: GTGGCTACAAGTGTAGGACCAAGAATTGAACCCCAG...CAGGACAAGCTCCCAGTGATCACTCAAGAATCTGGCTCTCATTCTAAGAGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450650.5
CDS-3UTR CCA 90 bp CTGAATACATCCCAAAGTGCTCAGATGAGCTGCTTGGTGGCCACAGGCTTAACTATTTGGATTCCTCTGTaGGAGATGGGCTGTGTCTCT +
Preference number: 4 (lower is better)
Translates to: LNTSQSAQMSCLVATGLTIWIPL*EMGCVS
Trigger: AGAGACACAGCCCATCTCCCACAGAGGAATCCAAAT...AGTTAAGCCTGTGGCCACCAAGCAGCTCATCTGAGCACTTTGGGATGTATTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450650.5
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACCCCAGTACACTGATCAGCACATAGTAGGTGCTGAGCATATCTGTTaGAAATGCTTTGTTGGGAGC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTPQYTDQHIVGAEHIC*KCFVGS
Trigger: GCTCCCAACAAAGCATTTTCAACAGATATGCTCAGC...ACCTACTATGTGCTGATCAGTGTACTGGGGTGTGTGTGTGTGTGTGTGTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450650.5
CDS-3UTR TCA 90 bp CTTAGAATGAGAGCCAGATTCTTGAGTGATCACTGGGAGCTTGTCCTGAGCCATAATGAATCCAACTGGTaGCAGGGGACTCAGAGACAA +
Preference number: 4 (lower is better)
Translates to: LRMRARFLSDHWELVLSHNESNW*QGTQRQ
Trigger: TTGTCTCTGAGTCCCCTGTCACCAGTTGGATTCATT...ATGGCTCAGGACAAGCTCCCAGTGATCACTCAAGAATCTGGCTCTCATTCTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR GCA 90 bp CAGCCTCTTAGAATGAGAGCCAGATTCTTGAGTGATCACTGGGAGCTTGTCCTGACCGGAAACGGAAAATaGCAGCATACTGGTGTGAAA +
Preference number: 4 (lower is better)
Translates to: QPLRMRARFLSDHWELVLTGNGK*QHTGVK
Trigger: TTTCACACCAGTATGCTGGCATTTTCCGTTTCCGGT...CAGGACAAGCTCCCAGTGATCACTCAAGAATCTGGCTCTCATTCTAAGAGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR GCA 90 bp ATGCAGGGCTGGTTTAGATTTATCACAACCACCATACTGGGCAGCACAGCCTCTTTTTCTCCGTGTCTGTaGAACCACAACATAGTTCCC +
Preference number: 4 (lower is better)
Translates to: MQGWFRFITTTILGSTASFSPCL*NHNIVP
Trigger: GGGAACTATGTTGTGGTTGCACAGACACGGAGAAAA...AGAGGCTGTGCTGCCCAGTATGGTGGTTGTGATAAATCTAAACCAGCCCTGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR CCA 90 bp GAAGGAAAGGTTTCACGGGGTACTGCCAATTGCTTGTTTAAAGATTTAGAGGGCTCTCAGGTTAGAGAGTaGTGGAGGAGACTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: EGKVSRGTANCLFKDLEGSQVRE*WRRLAE
Trigger: CTCTGCCAGTCTCCTCCACCACTCTCTAACCTGAGA...GCCCTCTAAATCTTTAAACAAGCAATTGGCAGTACCCCGTGAAACCTTTCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR CCA 90 bp CAGCCTCTTAGAATGAGAGCCAGATTCTTGAGTGATCACTGGGAGCTTGTCCTGGCTTCCATATCACATTaGAGAGGCGTTTTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: QPLRMRARFLSDHWELVLASISH*RGVFPG
Trigger: TCCAGGAAAAACGCCTCTCCAATGTGATATGGAAGC...CAGGACAAGCTCCCAGTGATCACTCAAGAATCTGGCTCTCATTCTAAGAGGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR CCA 90 bp TTAGATTTATCACAACCACCATACTGGGCAGCACAGCCTCTTAGAATGAGAGCCCAGAACTCTTGGTTTTaGTGGCGAGGACGCACAAAG +
Preference number: 4 (lower is better)
Translates to: LDLSQPPYWAAQPLRMRAQNSWF*WRGRTK
Trigger: CTTTGTGCGTCCTCGCCACCAAAACCAAGAGTTCTG...GGCTCTCATTCTAAGAGGCTGTGCTGCCCAGTATGGTGGTTGTGATAAATCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR CCA 90 bp GGTACTGCCAATTGCTTGTTTAAAGATTTAGAGGGCAATGCACCTCACACCCCACAGAACTCTTGGTTTTaGTGGCGAGGACGCACAAAG +
Preference number: 4 (lower is better)
Translates to: GTANCLFKDLEGNAPHTPQNSWF*WRGRTK
Trigger: CTTTGTGCGTCCTCGCCACCAAAACCAAGAGTTCTG...TGGGGTGTGAGGTGCATTGCCCTCTAAATCTTTAAACAAGCAATTGGCAGTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR CCA 90 bp GATCCAGGAAGAGAGGCAGGTAAAATAGTCCATCAAGTCACTTCTCCTCTCTGCATTCTGAGGTTGAAATaGCTGCTCAGGTGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: DPGREAGKIVHQVTSPLCILRLK*LLRCLS
Trigger: TGACAGGCACCTGAGCAGCCATTTCAACCTCAGAAT...GCAGAGAGGAGAAGTGACTTGATGGACTATTTTACCTGCCTCTCTTCCTGGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR CCA 90 bp AGCAGGCAGGGCCAGAACTCTTGGTTTTGGTGGCGAGGACGCACAAAGAGGCATTCTGTCATTTGCATCTaGTATAAACTTTTGCAGCAA +
Preference number: 4 (lower is better)
Translates to: SRQGQNSWFWWRGRTKRHSVICI*YKLLQQ
Trigger: TTGCTGCAAAAGTTTATACCAGATGCAAATGACAGA...ATGCCTCTTTGTGCGTCCTCGCCACCAAAACCAAGAGTTCTGGCCCTGCCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485248.2
CDS-3UTR TCA 90 bp CCATTAAGGAAATCCTGTGTGCACATAGGTGGTTTGGCAGCAAGGATGCTGTATCCTGGTAATACGCCATaGCTCTCCTTAGAAGACTTC +
Preference number: 4 (lower is better)
Translates to: PLRKSCVHIGGLAARMLYPGNTP*LSLEDF
Trigger: GAAGTCTTCTAAGGAGAGTCATGGCGTATTACCAGG...ATACAGCATCCTTGCTGCCAAACCACCTATGTGCACACAGGATTTCCTTAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR TCA 90 bp CTTAGAATGAGAGCCAGATTCTTGAGTGATCACTGGGAGCTTGTCCTGAGCCATACAGAGAAGTTGAATTaGGCATCATTCCGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: LRMRARFLSDHWELVLSHTEKLN*ASFRGP
Trigger: AGGACCTCGGAATGATGCTCAATTCAACTTCTCTGT...ATGGCTCAGGACAAGCTCCCAGTGATCACTCAAGAATCTGGCTCTCATTCTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR GCA 90 bp GAAGGAAAGGTTTCACGGGGTACTGCCAATTGCTTGTTTAAAGATTTAGAGGGCTCCACAGGGGAAGAGTaGAGATGGATGTTGGTGATC +
Preference number: 4 (lower is better)
Translates to: EGKVSRGTANCLFKDLEGSTGEE*RWMLVI
Trigger: GATCACCAACATCCATCTGCACTCTTCCCCTGTGGA...GCCCTCTAAATCTTTAAACAAGCAATTGGCAGTACCCCGTGAAACCTTTCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR GCA 90 bp GGATTCCTCTGTGGGAGATGGGCTGTGTCTCTGATAGATTCCAAAGCACAGCCATTGGACTCTGTTTCATaGAGGGCTGGTTTAGATTTA +
Preference number: 4 (lower is better)
Translates to: GFLCGRWAVSLIDSKAQPLDSVS*RAGLDL
Trigger: TAAATCTAAACCAGCCCTGCATGAAACAGAGTCCAA...TGGCTGTGCTTTGGAATCTATCAGAGACACAGCCCATCTCCCACAGAGGAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450650.5
CDS-3UTR CCA 90 bp GGCCGAGTAGGAGAAGGAAAGGTTTCACGGGGTACTGCCAATTGCTTGTTTAAAGCTGCGCCTCCTTGTTaGATGTCAAATCTGCTTATA +
Preference number: 4 (lower is better)
Translates to: GRVGEGKVSRGTANCLFKAAPPC*MSNLLI
Trigger: TATAAGCAGATTTGACATCCAACAAGGAGGCGCAGC...TTTAAACAAGCAATTGGCAGTACCCCGTGAAACCTTTCCTTCTCCTACTCGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR CCA 90 bp TTCCTCTTTGCTTCAGTTGTACATGACCAGGCTCATCCACTCCATTTCTGTCAGTTCTTGAGTGATCACTaGGAGCTTGTCCTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: FLFASVVHDQAHPLHFCQFLSDH*ELVLSH
Trigger: ATGGCTCAGGACAAGCTCCCAGTGATCACTCAAGAA...CTGACAGAAATGGAGTGGATGAGCCTGGTCATGTACAACTGAAGCAAAGAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450650.5
CDS-3UTR CCA 90 bp CTTAGAATGAGAGCCAGATTCTTGAGTGATCACTGGGAGCTTGTCCTGAGCCATTTAGAGCATCGACTTTaGAGGCTGAAAGCTCCAACT +
Preference number: 4 (lower is better)
Translates to: LRMRARFLSDHWELVLSHLEHRL*RLKAPT
Trigger: AGTTGGAGCTTTCAGCCTCCAAAGTCGATGCTCTAA...ATGGCTCAGGACAAGCTCCCAGTGATCACTCAAGAATCTGGCTCTCATTCTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450650.5
3UTR CAA 72 bp GGAGAAGGAAAGGTTTCACGGGGTACTGCCAATTGCTaGTTTAAAGATTTAGAGGGCAATGCACCTCACACC +
Preference number: 4 (lower is better)
Translates to: GEGKVSRGTANC*FKDLEGNAPHT
Trigger: GGTGTGAGGTGCATTGCCCTCTAAATCTTTAAACAAGCAATTGGCAGTACCCCGTGAAACCTTTCCTTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR TCA 90 bp CTTAGAATGAGAGCCAGATTCTTGAGTGATCACTGGGAGCTTGTCCTGAGCCATTTCTGTTGGAAATCTTaGCACGACATCCAAAACTCG +
Preference number: 4 (lower is better)
Translates to: LRMRARFLSDHWELVLSHFCWKS*HDIQNS
Trigger: CGAGTTTTGGATGTCGTGTCAAGATTTCCAACAGAA...ATGGCTCAGGACAAGCTCCCAGTGATCACTCAAGAATCTGGCTCTCATTCTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR TCA 90 bp CAGCCTCTTAGAATGAGAGCCAGATTCTTGAGTGATCACTGGGAGCTTGTCCTGTTCTGCTTTCAAATTTaGTGGTGTGACAGCAACTGT +
Preference number: 4 (lower is better)
Translates to: QPLRMRARFLSDHWELVLFCFQI*WCDSNC
Trigger: ACAGTTGCTGTCACACCATCAAATTTGAAAGCAGAA...CAGGACAAGCTCCCAGTGATCACTCAAGAATCTGGCTCTCATTCTAAGAGGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR TCA 90 bp ATGGCTGCTCAGGTGCCTGTCACTGTCTGGCATTTTCAGGAAGATTCGGAGCAAGCGGAATTTATTATTTaGGCTTTGGACAGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: MAAQVPVTVWHFQEDSEQAEFII*ALDSVS
Trigger: AGAAACACTGTCCAAAGCTCAAATAATAAATTCCGC...TTGCTCCGAATCTTCCTGAAAATGCCAGACAGTGACAGGCACCTGAGCAGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR TCA 90 bp TTAGATTTATCACAACCACCATACTGGGCAGCACAGCCTCTTAGAATGAGAGCCGCTGAGCATATCTGTTaGAAATGCTTTGTTGGGAGC +
Preference number: 4 (lower is better)
Translates to: LDLSQPPYWAAQPLRMRAAEHIC*KCFVGS
Trigger: GCTCCCAACAAAGCATTTTCAACAGATATGCTCAGC...GGCTCTCATTCTAAGAGGCTGTGCTGCCCAGTATGGTGGTTGTGATAAATCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR GCA 90 bp TTAACGGTAAGAGGCTCATTGTGCAGAGCCCCTGGCAGCTATTTTATTCTGACAACCGGAAACGGAAAATaGCAGCATACTGGTGTGAAA +
Preference number: 4 (lower is better)
Translates to: LTVRGSLCRAPGSYFILTTGNGK*QHTGVK
Trigger: TTTCACACCAGTATGCTGGCATTTTCCGTTTCCGGT...TGTCAGAATAAAATAGCTGCCAGGGGCTCTGCACAATGAGCCTCTTACCGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR GCA 90 bp CCATTAAGGAAATCCTGTGTGCACATAGGTGGTTTGGCAGCAAGGATGCTGTATTTTTCTCCGTGTCTGTaGAACCACAACATAGTTCCC +
Preference number: 4 (lower is better)
Translates to: PLRKSCVHIGGLAARMLYFSPCL*NHNIVP
Trigger: GGGAACTATGTTGTGGTTGCACAGACACGGAGAAAA...ATACAGCATCCTTGCTGCCAAACCACCTATGTGCACACAGGATTTCCTTAATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR GCA 90 bp GAAGGAAAGGTTTCACGGGGTACTGCCAATTGCTTGTTTAAAGATTTAGAGGGCCAAGGATGCTGTATGTaGTTTCTGAAGCTGGCTAGC +
Preference number: 4 (lower is better)
Translates to: EGKVSRGTANCLFKDLEGQGCCM*FLKLAS
Trigger: GCTAGCCAGCTTCAGAAAGCACATACAGCATCCTTG...GCCCTCTAAATCTTTAAACAAGCAATTGGCAGTACCCCGTGAAACCTTTCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR CCA 90 bp TTAGATTTATCACAACCACCATACTGGGCAGCACAGCCTCTTAGAATGAGAGCCTGGTGTGAAAAGCTTTaGACCATCAGGATCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LDLSQPPYWAAQPLRMRAWCEKL*TIRIFC
Trigger: GCAGAAGATCCTGATGGTCCAAAGCTTTTCACACCA...GGCTCTCATTCTAAGAGGCTGTGCTGCCCAGTATGGTGGTTGTGATAAATCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR CCA 90 bp CAGCCTCTTAGAATGAGAGCCAGATTCTTGAGTGATCACTGGGAGCTTGTCCTGTGTTTCATGCAGGGCTaGTTTAGATTTATCACAACC +
Preference number: 4 (lower is better)
Translates to: QPLRMRARFLSDHWELVLCFMQG*FRFITT
Trigger: GGTTGTGATAAATCTAAACCAGCCCTGCATGAAACA...CAGGACAAGCTCCCAGTGATCACTCAAGAATCTGGCTCTCATTCTAAGAGGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR TCA 90 bp GGTACTGCCAATTGCTTGTTTAAAGATTTAGAGGGCAATGCACCTCACACCCCATTCTGTTGGAAATCTTaGCACGACATCCAAAACTCG +
Preference number: 4 (lower is better)
Translates to: GTANCLFKDLEGNAPHTPFCWKS*HDIQNS
Trigger: CGAGTTTTGGATGTCGTGTCAAGATTTCCAACAGAA...TGGGGTGTGAGGTGCATTGCCCTCTAAATCTTTAAACAAGCAATTGGCAGTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR TCA 90 bp CACTGTCTGGCATTTTCAGGAAGATTCGGAGCAAGAACTCCGCTGATTTTCTCCTTCTGCTTTCAAATTTaGTGGTGTGACAGCAACTGT +
Preference number: 4 (lower is better)
Translates to: HCLAFSGRFGARTPLIFSFCFQI*WCDSNC
Trigger: ACAGTTGCTGTCACACCATCAAATTTGAAAGCAGAA...GGAGAAAATCAGCGGAGTTCTTGCTCCGAATCTTCCTGAAAATGCCAGACAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR TCA 90 bp CCACCATACTGGGCAGCACAGCCTCTTAGAATGAGAGCCAGATTCTTGAGTGATGCGGAATTTATTATTTaGGCTTTGGACAGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: PPYWAAQPLRMRARFLSDAEFII*ALDSVS
Trigger: AGAAACACTGTCCAAAGCTCAAATAATAAATTCCGC...ATCACTCAAGAATCTGGCTCTCATTCTAAGAGGCTGTGCTGCCCAGTATGGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR GCA 90 bp ATGCAGGGCTGGTTTAGATTTATCACAACCACCATACTGGGCAGCACAGCCTCTTCAGCACATAGTAGGTaGTTGATAGATGGTAACTAT +
Preference number: 4 (lower is better)
Translates to: MQGWFRFITTTILGSTASSAHSR*LIDGNY
Trigger: ATAGTTACCATCTATCAAGCACCTACTATGTGCTGA...AGAGGCTGTGCTGCCCAGTATGGTGGTTGTGATAAATCTAAACCAGCCCTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450650.5
CDS-3UTR GCA 90 bp CTCATTGTGCAGAGCCCCTGGCAGCTATTTTATTCTGACAAGTCAAGGAGTTCTTCTGGTATAAACTTTTaGAGCAAGTCACTCACCGGT +
Preference number: 4 (lower is better)
Translates to: LIVQSPWQLFYSDKSRSSSGINF*SKSLTG
Trigger: ACCGGTGAGTGACTTGCTGCAAAAGTTTATACCAGA...AGAACTCCTTGACTTGTCAGAATAAAATAGCTGCCAGGGGCTCTGCACAATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR CCA 90 bp GAAGGAAAGGTTTCACGGGGTACTGCCAATTGCTTGTTTAAAGATTTAGAGGGCTGGTGTGAAAAGCTTTaGACCATCAGGATCTTCTGC +
Preference number: 4 (lower is better)
Translates to: EGKVSRGTANCLFKDLEGWCEKL*TIRIFC
Trigger: GCAGAAGATCCTGATGGTCCAAAGCTTTTCACACCA...GCCCTCTAAATCTTTAAACAAGCAATTGGCAGTACCCCGTGAAACCTTTCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR GCA 90 bp TTAACGGTAAGAGGCTCATTGTGCAGAGCCCCTGGCAGCTATTTTATTCTGACACGGGGTACTGCCAATTaGTTGTTTAAAGATTTAGAG +
Preference number: 4 (lower is better)
Translates to: LTVRGSLCRAPGSYFILTRGTAN*LFKDLE
Trigger: CTCTAAATCTTTAAACAAGCAATTGGCAGTACCCCG...TGTCAGAATAAAATAGCTGCCAGGGGCTCTGCACAATGAGCCTCTTACCGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR CCA 90 bp TTAGATTTATCACAACCACCATACTGGGCAGCACAGCCTCTTAGAATGAGAGCCTTCCTAAACATTATTTaGGACCATCCTTCGTGGAGT +
Preference number: 4 (lower is better)
Translates to: LDLSQPPYWAAQPLRMRAFLNII*DHPSWS
Trigger: ACTCCACGAAGGATGGTCCCAAATAATGTTTAGGAA...GGCTCTCATTCTAAGAGGCTGTGCTGCCCAGTATGGTGGTTGTGATAAATCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR CCA 90 bp ATGCAGGGCTGGTTTAGATTTATCACAACCACCATACTGGGCAGCACAGCCTCTTTATTATTTGAGCTTTaGACAGTGTTTCTGAACGAG +
Preference number: 4 (lower is better)
Translates to: MQGWFRFITTTILGSTASLLFEL*TVFLNE
Trigger: CTCGTTCAGAAACACTGTCCAAAGCTCAAATAATAA...AGAGGCTGTGCTGCCCAGTATGGTGGTTGTGATAAATCTAAACCAGCCCTGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR GCA 90 bp TTATCACAACCACCATACTGGGCAGCACAGCCTCTTAGAATGAGAGCCAGATTCTTGTATCAGAGGGATTaGTTCAAGAATTATAAGGAC +
Preference number: 4 (lower is better)
Translates to: LSQPPYWAAQPLRMRARFLYQRD*FKNYKD
Trigger: GTCCTTATAATTCTTGAAGCAATCCCTCTGATACAA...GAATCTGGCTCTCATTCTAAGAGGCTGTGCTGCCCAGTATGGTGGTTGTGATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450650.5
CDS-3UTR CCA 90 bp GATCCAGGAAGAGAGGCAGGTAAAATAGTCCATCAAGTCACTTCTCCTCTCTGCTCTGTCATTTGCATCTaGTATAAACTTTTGCAGCAA +
Preference number: 4 (lower is better)
Translates to: DPGREAGKIVHQVTSPLCSVICI*YKLLQQ
Trigger: TTGCTGCAAAAGTTTATACCAGATGCAAATGACAGA...GCAGAGAGGAGAAGTGACTTGATGGACTATTTTACCTGCCTCTCTTCCTGGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR CCA 90 bp CTCATTGTGCAGAGCCCCTGGCAGCTATTTTATTCTGACAAGTCAAGGAGTTCTATGGTCCAGGGTAATTaGAATTTCGCTACATATAAA +
Preference number: 4 (lower is better)
Translates to: LIVQSPWQLFYSDKSRSSMVQGN*NFATYK
Trigger: TTTATATGTAGCGAAATTCCAATTACCCTGGACCAT...AGAACTCCTTGACTTGTCAGAATAAAATAGCTGCCAGGGGCTCTGCACAATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS CCA 90 bp GAGGAGGGGAGACGGGCAGGTTCCACAGGCTCTCAGGTTAGAGAGTaGTGGAGGAGACTGGCAGAGGAGGAGAGCATGGCCGGCCGTCTT +
Preference number: 5 (lower is better)
Translates to: EEGRRAGSTGSQVRE*WRRLAEEESMAGRL
Trigger: AAGACGGCCGGCCATGCTCTCCTCCTCTGCCAGTCTCCTCCACCACTCTCTAACCTGAGAGCCTGTGGAACCTGCCCGTCTCCCCTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295055.12
ENST00000458085.6
ENST00000465960.2
ENST00000485248.2
CDS-3UTR CAA 90 bp AGTCCCCCGGATGACACTGGGTGGGGCGCCACGTCTCTACCGAGCTTGGCAGCCACGCACACGACAACATaGGTGCCTTCCATTGGCTCT +
Preference number: 5 (lower is better)
Translates to: SPPDDTGWGATSLPSLAATHTTT*VPSIGS
Trigger: AGAGCCAATGGAAGGCACCAATGTTGTCGTGTGCGT...GGCTGCCAAGCTCGGTAGAGACGTGGCGCCCCACCCAGTGTCATCCGGGGGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS CCA 90 bp GGGCAGGTTCCACAGGCTCTCAGGTTAGAGAGTGGTGGAGGAGACTaGCAGAGGAGGAGAGCATGGCCGGCCGTCTTGGAGAAAGAGCAG +
Preference number: 5 (lower is better)
Translates to: GQVPQALRLESGGGD*QRRRAWPAVLEKEQ
Trigger: CTGCTCTTTCTCCAAGACGGCCGGCCATGCTCTCCTCCTCTGCCAGTCTCCTCCACCACTCTCTAACCTGAGAGCCTGTGGAACCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000465960.2
CDS CCA 90 bp GTGGTGGAGGAGACTGGCAGAGGAGGAGAGCATGGCCGGCCGTCTTaGAGAAAGAGCAGTGCTGGTGTCTGCTTACTCCTGACCTCAGGC +
Preference number: 5 (lower is better)
Translates to: VVEETGRGGEHGRPS*RKSSAGVCLLLTSG
Trigger: GCCTGAGGTCAGGAGTAAGCAGACACCAGCACTGCTCTTTCTCCAAGACGGCCGGCCATGCTCTCCTCCTCTGCCAGTCTCCTCCACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465960.2
CDS-3UTR CAA 90 bp AGTCCCCCGGATGACACTGGGTGGGGCGCCACGTCTCTACCGAGCTTGGCAGCCTATCTGTTGGCCCACTaGGAGTGGCACAGGTTATCA +
Preference number: 5 (lower is better)
Translates to: SPPDDTGWGATSLPSLAAYLLAH*EWHRLS
Trigger: TGATAACCTGTGCCACTCCAAGTGGGCCAACAGATA...GGCTGCCAAGCTCGGTAGAGACGTGGCGCCCCACCCAGTGTCATCCGGGGGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR CAA 90 bp CCTGGGCCAGCCAAGGACCGAACCCAGGCTGTTGGGAGACAGCTTGGACTCTGTCCTGTGCTGTATCTGTaGGCCCACTTGGAGTGGCAC +
Preference number: 5 (lower is better)
Translates to: PGPAKDRTQAVGRQLGLCPVLYL*AHLEWH
Trigger: GTGCCACTCCAAGTGGGCCAACAGATACAGCACAGG...ACAGAGTCCAAGCTGTCTCCCAACAGCCTGGGTTCGGTCCTTGGCTGGCCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR CAA 90 bp ATGTGCTTTCTGAAGCTGGCTAGCTCCCGGGAGGAACGATGCCAGGTTGGTGGGGCAGGGCCAGAACTCTaGGTTTTGGTGGCGAGGACG +
Preference number: 5 (lower is better)
Translates to: MCFLKLASSREERCQVGGAGPEL*VLVART
Trigger: CGTCCTCGCCACCAAAACCAAGAGTTCTGGCCCTGC...CCCACCAACCTGGCATCGTTCCTCCCGGGAGCTAGCCAGCTTCAGAAAGCACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR CAA 90 bp GTCCCCTTTCTCCAATCCCACGTAAGGCCCCTGGGTGCTAGGTACCATACCTGCATCAGGGAGCCTGCCTaGGTCGCTGTCTTCACTGCC +
Preference number: 5 (lower is better)
Translates to: VPFLQSHVRPLGARYHTCIREPA*VAVFTA
Trigger: GGCAGTGAAGACAGCGACCAAGGCAGGCTCCCTGAT...GCAGGTATGGTACCTAGCACCCAGGGGCCTTACGTGGGATTGGAGAAAGGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR CAA 90 bp GCAAACACCCAGTGGACAGCTCTTGTGTCACCCATAGCACCCGAGGGTGGTCAAGCAGGGCCAGAACTCTaGGTTTTGGTGGCGAGGACG +
Preference number: 5 (lower is better)
Translates to: ANTQWTALVSPIAPEGGQAGPEL*VLVART
Trigger: CGTCCTCGCCACCAAAACCAAGAGTTCTGGCCCTGC...TTGACCACCCTCGGGTGCTATGGGTGACACAAGAGCTGTCCACTGGGTGTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR CAA 90 bp GGCATCCTCGAGGAAGCCATAGTGCAGATCGGAATAGGATCCGAGCAGCTTGGCGCAGGGCCAGAACTCTaGGTTTTGGTGGCGAGGACG +
Preference number: 5 (lower is better)
Translates to: GILEEAIVQIGIGSEQLGAGPEL*VLVART
Trigger: CGTCCTCGCCACCAAAACCAAGAGTTCTGGCCCTGC...GCCAAGCTGCTCGGATCCTATTCCGATCTGCACTATGGCTTCCTCGAGGATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485248.2
CDS-3UTR CAA 90 bp GCTCTTGTGTCACCCATAGCACCCGAGGGTGGTCAAAGTGGCTCATTCTGGCTCATCAGGGAGCCTGCCTaGGTCGCTGTCTTCACTGCC +
Preference number: 5 (lower is better)
Translates to: ALVSPIAPEGGQSGSFWLIREPA*VAVFTA
Trigger: GGCAGTGAAGACAGCGACCAAGGCAGGCTCCCTGAT...GAGCCAGAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACACAAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR CAA 90 bp AGTCCCCCGGATGACACTGGGTGGGGCGCCACGTCTCTACCGAGCTTGGCAGCCCTTCCTAAACATTATTaGGGACCATCCTTCGTGGAG +
Preference number: 5 (lower is better)
Translates to: SPPDDTGWGATSLPSLAALPKHY*GPSFVE
Trigger: CTCCACGAAGGATGGTCCCAAATAATGTTTAGGAAG...GGCTGCCAAGCTCGGTAGAGACGTGGCGCCCCACCCAGTGTCATCCGGGGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS GCA 90 bp TTGGTCGCTGTCTTCACTGCCTTCACCAGGTCCACAGGGGAAGAGTaGAGATGGATGTTGGTGATCACGCCTCCTGTGAGGTCCACCAGG +
Preference number: 5 (lower is better)
Translates to: LVAVFTAFTRSTGEE*RWMLVITPPVRSTR
Trigger: CCTGGTGGACCTCACAGGAGGCGTGATCACCAACATCCATCTGCACTCTTCCCCTGTGGACCTGGTGAAGGCAGTGAAGACAGCGACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295055.12
ENST00000458085.6
ENST00000465960.2
CDS-3UTR CAA 90 bp CAGCTTGAAGTCCCCCGGATGACACTGGGTGGGGCGCCACGTCTCTACCGAGCTTCCTGGTCTTTGAACTaGATGATGGAGGTCTCCACT +
Preference number: 5 (lower is better)
Translates to: QLEVPRMTLGGAPRLYRASWSLN*MMEVST
Trigger: AGTGGAGACCTCCATCATCAAGTTCAAAGACCAGGA...AGCTCGGTAGAGACGTGGCGCCCCACCCAGTGTCATCCGGGGGACTTCAAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR CAA 90 bp TCTGCAAACACCCAGTGGACAGCTCTTGTGTCACCCATAGCACCCGAGGGTGGTACCGAACCCAGGCTGTaGGGAGACAGCTTGGACTCT +
Preference number: 5 (lower is better)
Translates to: SANTQWTALVSPIAPEGGTEPRL*GDSLDS
Trigger: AGAGTCCAAGCTGTCTCCCAACAGCCTGGGTTCGGT...ACCACCCTCGGGTGCTATGGGTGACACAAGAGCTGTCCACTGGGTGTTTGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR CAA 90 bp TGGACAGCTCTTGTGTCACCCATAGCACCCGAGGGTGGTCAAAGTGGCTCATTCGTCAGCCTCTTCTGCTaGCCAAGCCAGGGGTACGCA +
Preference number: 5 (lower is better)
Translates to: WTALVSPIAPEGGQSGSFVSLFC*PSQGYA
Trigger: TGCGTACCCCTGGCTTGGCAAGCAGAAGAGGCTGAC...GAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACACAAGAGCTGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450650.5
CDS GCA 90 bp CAGGATCTTCTGCCTGTACTGTGGGTTCTGAGTCAAGGATCCCAGTaGTGCCAGGAACCAGCAGTCAGCTGCGCCTCCTTGTTGGATGTC +
Preference number: 5 (lower is better)
Translates to: QDLLPVLWVLSQGSQ*CQEPAVSCASLLDV
Trigger: GACATCCAACAAGGAGGCGCAGCTGACTGCTGGTTCCTGGCAGCACTGGGATCCTTGACTCAGAACCCACAGTACAGGCAGAAGATCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295055.12
ENST00000458085.6
ENST00000465960.2
CDS-3UTR CAA 90 bp TGTGTCACCCATAGCACCCGAGGGTGGTCAAAGTGGCTCATTCTGGCTCTTCCACACCCACTGGCCACATaGCCAGAACCGGAAACGGAA +
Preference number: 5 (lower is better)
Translates to: CVTHSTRGWSKWLILALPHPLAT*PEPETE
Trigger: TTCCGTTTCCGGTTCTGGCAATGTGGCCAGTGGGTG...TGGAAGAGCCAGAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR CAA 90 bp CTGGGCCAGCCAAGGACCGAACCCAGGCTGTTGGGAGACAGCTTGGACTCTGTTTATCTGTTGGCCCACTaGGAGTGGCACAGGTTATCA +
Preference number: 5 (lower is better)
Translates to: LGQPRTEPRLLGDSLDSVYLLAH*EWHRLS
Trigger: TGATAACCTGTGCCACTCCAAGTGGGCCAACAGATA...AACAGAGTCCAAGCTGTCTCCCAACAGCCTGGGTTCGGTCCTTGGCTGGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR CAA 90 bp GTGTCACCCATAGCACCCGAGGGTGGTCAAAGTGGCTCATTCTGGCTCTTCCAACCAGCCCCTTCGGTATaGAATCTGCTCAGCCCCAGT +
Preference number: 5 (lower is better)
Translates to: VSPIAPEGGQSGSFWLFQPAPSV*NLLSPS
Trigger: ACTGGGGCTGAGCAGATTCAATACCGAAGGGGCTGG...TTGGAAGAGCCAGAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS GCA 90 bp GGAGAGCATGGCCGGCCGTCTTGGAGAAAGAGCAGTGCTGGTGTCTaGTTACTCCTGACCTCAGGCTTTTCCTTATATGGGTGTACCAGG +
Preference number: 5 (lower is better)
Translates to: GEHGRPSWRKSSAGV*LLLTSGFSLYGCTR
Trigger: CCTGGTACACCCATATAAGGAAAAGCCTGAGGTCAGGAGTAAGCAGACACCAGCACTGCTCTTTCTCCAAGACGGCCGGCCATGCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465960.2
CDS GCA 90 bp TGGCAGAGGAGGAGAGCATGGCCGGCCGTCTTGGAGAAAGAGCAGTaGTGGTGTCTGCTTACTCCTGACCTCAGGCTTTTCCTTATATGG +
Preference number: 5 (lower is better)
Translates to: WQRRRAWPAVLEKEQ*WCLLTPDLRLFLIW
Trigger: CCATATAAGGAAAAGCCTGAGGTCAGGAGTAAGCAGACACCAGCACTGCTCTTTCTCCAAGACGGCCGGCCATGCTCTCCTCCTCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465960.2
CDS-3UTR CAA 90 bp GGCATCCTCGAGGAAGCCATAGTGCAGATCGGAATAGGATCCGAGCAGCTTGGCCCAGAACTCTTGGTTTaGGTGGCGAGGACGCACAAA +
Preference number: 5 (lower is better)
Translates to: GILEEAIVQIGIGSEQLGPELLV*VARTHK
Trigger: TTTGTGCGTCCTCGCCACCAAAACCAAGAGTTCTGG...GCCAAGCTGCTCGGATCCTATTCCGATCTGCACTATGGCTTCCTCGAGGATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485248.2
CDS-3UTR CAA 90 bp GCTCTTGTGTCACCCATAGCACCCGAGGGTGGTCAAAGTGGCTCATTCTGGCTCGGAGGACTCCAGGGCTaGTCTGAACCTTCTGGAAAA +
Preference number: 5 (lower is better)
Translates to: ALVSPIAPEGGQSGSFWLGGLQG*SEPSGK
Trigger: TTTTCCAGAAGGTTCAGACAAGCCCTGGAGTCCTCC...GAGCCAGAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACACAAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS TCA 90 bp GAAAAGCTTTGGACCATCAGGATCTTCTGCCTGTACTGTGGGTTCTaGGTCAAGGATCCCAGTGCTGCCAGGAACCAGCAGTCAGCTGCG +
Preference number: 5 (lower is better)
Translates to: EKLWTIRIFCLYCGF*VKDPSAARNQQSAA
Trigger: CGCAGCTGACTGCTGGTTCCTGGCAGCACTGGGATCCTTGACTCAGAACCCACAGTACAGGCAGAAGATCCTGATGGTCCAAAGCTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295055.12
ENST00000458085.6
ENST00000465960.2
CDS TCA 90 bp GCCGGCCGTCTTGGAGAAAGAGCAGTGCTGGTGTCTGCTTACTCCTaGCCTCAGGCTTTTCCTTATATGGGTGTACCAGGTAAAGGCAGG +
Preference number: 5 (lower is better)
Translates to: AGRLGERAVLVSAYS*PQAFPYMGVPGKGR
Trigger: CCTGCCTTTACCTGGTACACCCATATAAGGAAAAGCCTGAGGTCAGGAGTAAGCAGACACCAGCACTGCTCTTTCTCCAAGACGGCCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465960.2
CDS GCA 90 bp GAGGCGTTTTTCCTGGAGCAGCTTCTGGCCTATGGAAGAATCTGCTaGAGGGAATGTCTCATCCTTAAACGTCCGGCCCATGCTCAGGCA +
Preference number: 5 (lower is better)
Translates to: EAFFLEQLLAYGRIC*RECLILKRPAHAQA
Trigger: TGCCTGAGCATGGGCCGGACGTTTAAGGATGAGACATTCCCTGCAGCAGATTCTTCCATAGGCCAGAAGCTGCTCCAGGAAAAACGCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295055.12
ENST00000458085.6
ENST00000465960.2
ENST00000485248.2
CDS GCA 90 bp GGAGAGGCGTTTTTCCTGGAGCAGCTTCTGGCCTATGGAAGAATCTaGTGCAGGGAATGTCTCATCCTTAAACGTCCGGCCCATGCTCAG +
Preference number: 5 (lower is better)
Translates to: GEAFFLEQLLAYGRI*CRECLILKRPAHAQ
Trigger: CTGAGCATGGGCCGGACGTTTAAGGATGAGACATTCCCTGCAGCAGATTCTTCCATAGGCCAGAAGCTGCTCCAGGAAAAACGCCTCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295055.12
ENST00000458085.6
ENST00000465960.2
ENST00000485248.2
CDS CCA 90 bp GAGGAGGACCCCCTGGTAGATCCTGTGGCCGCTTCCATATCACATTaGAGAGGCGTTTTTCCTGGAGCAGCTTCTGGCCTATGGAAGAAT +
Preference number: 5 (lower is better)
Translates to: EEDPLVDPVAASISH*RGVFPGAASGLWKN
Trigger: ATTCTTCCATAGGCCAGAAGCTGCTCCAGGAAAAACGCCTCTCCAATGTGATATGGAAGCGGCCACAGGATCTACCAGGGGGTCCTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295055.12
ENST00000458085.6
ENST00000465960.2
ENST00000485248.2
CDS-3UTR CAA 90 bp TTATCACAACCACCATACTGGGCAGCACAGCCTCTTAGAATGAGAGCCAGATTCGCATGGCCGGCCGTCTaGGAGAAAGAGCAGTGCTGG +
Preference number: 5 (lower is better)
Translates to: LSQPPYWAAQPLRMRARFAWPAV*EKEQCW
Trigger: CCAGCACTGCTCTTTCTCCAAGACGGCCGGCCATGC...GAATCTGGCTCTCATTCTAAGAGGCTGTGCTGCCCAGTATGGTGGTTGTGATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR CAA 90 bp CAGCTTGAAGTCCCCCGGATGACACTGGGTGGGGCGCCACGTCTCTACCGAGCTTTTCTGTTGGAAATCTaGACACGACATCCAAAACTC +
Preference number: 5 (lower is better)
Translates to: QLEVPRMTLGGAPRLYRAFLLEI*TRHPKL
Trigger: GAGTTTTGGATGTCGTGTCAAGATTTCCAACAGAAA...AGCTCGGTAGAGACGTGGCGCCCCACCCAGTGTCATCCGGGGGACTTCAAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR CAA 90 bp TGTGTCACCCATAGCACCCGAGGGTGGTCAAAGTGGCTCATTCTGGCTCTTCCAACGCACACGACAACATaGGTGCCTTCCATTGGCTCT +
Preference number: 5 (lower is better)
Translates to: CVTHSTRGWSKWLILALPTHTTT*VPSIGS
Trigger: AGAGCCAATGGAAGGCACCAATGTTGTCGTGTGCGT...TGGAAGAGCCAGAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR CAA 90 bp TCTGGAAAACATGCTGGTAGTGAACAAGGCGCTTCCACAGTCGCGCAAACTCCTAGTCCCAATTCAGCCTaGTCAACGGTGCAGGAGCGG +
Preference number: 5 (lower is better)
Translates to: SGKHAGSEQGASTVAQTPSPNSA*STVQER
Trigger: CCGCTCCTGCACCGTTGACAAGGCTGAATTGGGACT...AGGAGTTTGCGCGACTGTGGAAGCGCCTTGTTCACTACCAGCATGTTTTCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450650.5
CDS-3UTR CAA 90 bp ACAGCTCTTGTGTCACCCATAGCACCCGAGGGTGGTCAAAGTGGCTCATTCTGGCGCTTCCATATCACATaGGAGAGGCGTTTTTCCTGG +
Preference number: 5 (lower is better)
Translates to: TALVSPIAPEGGQSGSFWRFHIT*ERRFSW
Trigger: CCAGGAAAAACGCCTCTCCAATGTGATATGGAAGCG...CCAGAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACACAAGAGCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR CAA 90 bp GCTCTTGTGTCACCCATAGCACCCGAGGGTGGTCAAAGTGGCTCATTCTGGCTCAGCTGCGCCTCCTTGTaGGATGTCAAATCTGCTTAT +
Preference number: 5 (lower is better)
Translates to: ALVSPIAPEGGQSGSFWLSCASL*DVKSAY
Trigger: ATAAGCAGATTTGACATCCAACAAGGAGGCGCAGCT...GAGCCAGAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACACAAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR CAA 90 bp GTCACCAGATGCAGCAGCTCACGGCTGATGAAGATCCCTCTGAGGAAGTCTGTACCCTTCATTCTGAGGTaGAAATGGCTGCTCAGGTGC +
Preference number: 5 (lower is better)
Translates to: VTRCSSSRLMKIPLRKSVPFILR*KWLLRC
Trigger: GCACCTGAGCAGCCATTTCAACCTCAGAATGAAGGG...TACAGACTTCCTCAGAGGGATCTTCATCAGCCGTGAGCTGCTGCATCTGGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450650.5
CDS-3UTR CAA 90 bp TTTCCAGGGCAACGTAGGCTGAATACATCCCAAAGTGCTCAGATGAGCTGCTTGGGTTGCGGAAGGTCTTaGCCATGGCTTCAAGCCGCA +
Preference number: 5 (lower is better)
Translates to: FPGQRRLNTSQSAQMSCLGCGRS*PWLQAA
Trigger: TGCGGCTTGAAGCCATGGCAAAGACCTTCCGCAACC...CAAGCAGCTCATCTGAGCACTTTGGGATGTATTCAGCCTACGTTGCCCTGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR CAA 90 bp CTTGTCCTGAGCCATGGGTCTGCTTTCCTCTTTGCTTCAGTTGTACATGACCAGGGTTGCGGAAGGTCTTaGCCATGGCTTCAAGCCGCA +
Preference number: 5 (lower is better)
Translates to: LVLSHGSAFLFASVVHDQGCGRS*PWLQAA
Trigger: TGCGGCTTGAAGCCATGGCAAAGACCTTCCGCAACC...CTGGTCATGTACAACTGAAGCAAAGAGGAAAGCAGACCCATGGCTCAGGACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450650.5
CDS-3UTR CAA 90 bp CTGCTTCCTTTTCCAGGGCAACGTAGGCTGAATACATCCCAAAGTGCTCAGATGACCGAACCCAGGCTGTaGGGAGACAGCTTGGACTCT +
Preference number: 5 (lower is better)
Translates to: LLPFPGQRRLNTSQSAQMTEPRL*GDSLDS
Trigger: AGAGTCCAAGCTGTCTCCCAACAGCCTGGGTTCGGT...CATCTGAGCACTTTGGGATGTATTCAGCCTACGTTGCCCTGGAAAAGGAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS TCA 90 bp CTGCGCCTCCTTGTTGGATGTCAAATCTGCTTATATCATCCAGGATaGAGTGAGGAGGACCCCCTGGTAGATCCTGTGGCCGCTTCCATA +
Preference number: 5 (lower is better)
Translates to: LRLLVGCQICLYHPG*SEEDPLVDPVAASI
Trigger: TATGGAAGCGGCCACAGGATCTACCAGGGGGTCCTCCTCACTTCATCCTGGATGATATAAGCAGATTTGACATCCAACAAGGAGGCGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295055.12
ENST00000458085.6
ENST00000465960.2
ENST00000485248.2
CDS-3UTR CAA 90 bp CTCGAGGAAGCCATAGTGCAGATCGGAATAGGATCCGAGCAGCTTGGCATAGGCTCCTGGTCTTTGAACTaGATGATGGAGGTCTCCACT +
Preference number: 5 (lower is better)
Translates to: LEEAIVQIGIGSEQLGIGSWSLN*MMEVST
Trigger: AGTGGAGACCTCCATCATCAAGTTCAAAGACCAGGA...GCCTATGCCAAGCTGCTCGGATCCTATTCCGATCTGCACTATGGCTTCCTCGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485248.2
CDS-3UTR CAA 90 bp GCTGAATACATCCCAAAGTGCTCAGATGAGCTGCTTGGTGGCCACAGGCTTAACGTCAGCTGCGCCTCCTaGTTGGATGTCAAATCTGCT +
Preference number: 5 (lower is better)
Translates to: AEYIPKCSDELLGGHRLNVSCAS*LDVKSA
Trigger: AGCAGATTTGACATCCAACAAGGAGGCGCAGCTGAC...GTTAAGCCTGTGGCCACCAAGCAGCTCATCTGAGCACTTTGGGATGTATTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR CAA 90 bp AGGTGGCCGAGTAGGAGAAGGAAAGGTTTCACGGGGTACTGCCAATTGCTTGTTGTCAGCTGCGCCTCCTaGTTGGATGTCAAATCTGCT +
Preference number: 5 (lower is better)
Translates to: RWPSRRRKGFTGYCQLLVVSCAS*LDVKSA
Trigger: AGCAGATTTGACATCCAACAAGGAGGCGCAGCTGAC...AACAAGCAATTGGCAGTACCCCGTGAAACCTTTCCTTCTCCTACTCGGCCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR CAA 90 bp CCACCATACTGGGCAGCACAGCCTCTTAGAATGAGAGCCAGATTCTTGAGTGATGAGTGCAGATGGATGTaGGTGATCACGCCTCCTGTG +
Preference number: 5 (lower is better)
Translates to: PPYWAAQPLRMRARFLSDECRWM*VITPPV
Trigger: CACAGGAGGCGTGATCACCAACATCCATCTGCACTC...ATCACTCAAGAATCTGGCTCTCATTCTAAGAGGCTGTGCTGCCCAGTATGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR CAA 90 bp GATCCAGGAAGAGAGGCAGGTAAAATAGTCCATCAAGTCACTTCTCCTCTCTGCCCTGTGCTGTATCTGTaGGCCCACTTGGAGTGGCAC +
Preference number: 5 (lower is better)
Translates to: DPGREAGKIVHQVTSPLCPVLYL*AHLEWH
Trigger: GTGCCACTCCAAGTGGGCCAACAGATACAGCACAGG...GCAGAGAGGAGAAGTGACTTGATGGACTATTTTACCTGCCTCTCTTCCTGGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR CAA 90 bp GATCCAGGAAGAGAGGCAGGTAAAATAGTCCATCAAGTCACTTCTCCTCTCTGCCCAGCCCCTTCGGTATaGAATCTGCTCAGCCCCAGT +
Preference number: 5 (lower is better)
Translates to: DPGREAGKIVHQVTSPLCPAPSV*NLLSPS
Trigger: ACTGGGGCTGAGCAGATTCAATACCGAAGGGGCTGG...GCAGAGAGGAGAAGTGACTTGATGGACTATTTTACCTGCCTCTCTTCCTGGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR CAA 90 bp CTGGGCCAGCCAAGGACCGAACCCAGGCTGTTGGGAGACAGCTTGGACTCTGTTTTTCTGTTGGAAATCTaGACACGACATCCAAAACTC +
Preference number: 5 (lower is better)
Translates to: LGQPRTEPRLLGDSLDSVFLLEI*TRHPKL
Trigger: GAGTTTTGGATGTCGTGTCAAGATTTCCAACAGAAA...AACAGAGTCCAAGCTGTCTCCCAACAGCCTGGGTTCGGTCCTTGGCTGGCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR CAA 90 bp TCTGCAAACACCCAGTGGACAGCTCTTGTGTCACCCATAGCACCCGAGGGTGGTGCCAGCCAGAATCACTaGGAAATCGAGTGGAAATTT +
Preference number: 5 (lower is better)
Translates to: SANTQWTALVSPIAPEGGASQNH*EIEWKF
Trigger: AAATTTCCACTCGATTTCCAAGTGATTCTGGCTGGC...ACCACCCTCGGGTGCTATGGGTGACACAAGAGCTGTCCACTGGGTGTTTGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR CAA 90 bp GCTGAATACATCCCAAAGTGCTCAGATGAGCTGCTTGGTGGCCACAGGCTTAACCCATCCTTAGAGAGGTaGCGGAAGGTCTTTGCCATG +
Preference number: 5 (lower is better)
Translates to: AEYIPKCSDELLGGHRLNPSLER*RKVFAM
Trigger: CATGGCAAAGACCTTCCGCAACCTCTCTAAGGATGG...GTTAAGCCTGTGGCCACCAAGCAGCTCATCTGAGCACTTTGGGATGTATTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR CAA 90 bp GGATTCCTCTGTGGGAGATGGGCTGTGTCTCTGATAGATTCCAAAGCACAGCCACCATCCTTAGAGAGGTaGCGGAAGGTCTTTGCCATG +
Preference number: 5 (lower is better)
Translates to: GFLCGRWAVSLIDSKAQPPSLER*RKVFAM
Trigger: CATGGCAAAGACCTTCCGCAACCTCTCTAAGGATGG...TGGCTGTGCTTTGGAATCTATCAGAGACACAGCCCATCTCCCACAGAGGAATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450650.5
CDS-3UTR CAA 90 bp TTCACAATGGCCGGCTTCACAGTCCCAATTCAGCCTTGTCAACGGTGCAGGAGCATGAGAGCCAGATTCTaGAGTGATCACTGGGAGCTT +
Preference number: 5 (lower is better)
Translates to: FTMAGFTVPIQPCQRCRSMRARF*SDHWEL
Trigger: AAGCTCCCAGTGATCACTCAAGAATCTGGCTCTCAT...GCTCCTGCACCGTTGACAAGGCTGAATTGGGACTGTGAAGCCGGCCATTGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450650.5
CDS-3UTR CAA 90 bp GGCCGAGTAGGAGAAGGAAAGGTTTCACGGGGTACTGCCAATTGCTTGTTTAAAACGTCTCTACCGAGCTaGGCAGCCACAGCAGTTCTG +
Preference number: 5 (lower is better)
Translates to: GRVGEGKVSRGTANCLFKTSLPS*AATAVL
Trigger: CAGAACTGCTGTGGCTGCCAAGCTCGGTAGAGACGT...TTTAAACAAGCAATTGGCAGTACCCCGTGAAACCTTTCCTTCTCCTACTCGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR CAA 90 bp CTCATTGTGCAGAGCCCCTGGCAGCTATTTTATTCTGACAAGTCAAGGAGTTCTACGGTAAGAGGCTCATaGTGCAGAGCCCCTGGCAGC +
Preference number: 5 (lower is better)
Translates to: LIVQSPWQLFYSDKSRSSTVRGS*CRAPGS
Trigger: GCTGCCAGGGGCTCTGCACAATGAGCCTCTTACCGT...AGAACTCCTTGACTTGTCAGAATAAAATAGCTGCCAGGGGCTCTGCACAATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR CAA 90 bp AGCCATAGTGCAGATCGGAATAGGATCCGAGCAGCTTGGCATAGGCCTTCTCCACAGAACTGCGCCTCCTaGTTGGATGTCAAATCTGCT +
Preference number: 5 (lower is better)
Translates to: SHSADRNRIRAAWHRPSPQNCAS*LDVKSA
Trigger: AGCAGATTTGACATCCAACAAGGAGGCGCAGTTCTG...TGGAGAAGGCCTATGCCAAGCTGCTCGGATCCTATTCCGATCTGCACTATGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485248.2
CDS-3UTR CAA 90 bp TCTTGTGTCACCCATAGCACCCGAGGGTGGTCAAAGTGGCTCATTCTGGCTCTTTCCTGGTCTTTGAACTaGATGATGGAGGTCTCCACT +
Preference number: 5 (lower is better)
Translates to: SCVTHSTRGWSKWLILALSWSLN*MMEVST
Trigger: AGTGGAGACCTCCATCATCAAGTTCAAAGACCAGGA...AAGAGCCAGAATGAGCCACTTTGACCACCCTCGGGTGCTATGGGTGACACAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR CAA 90 bp ATGCAGGGCTGGTTTAGATTTATCACAACCACCATACTGGGCAGCACAGCCTCTCCAGAACTCTTGGTTTaGGTGGCGAGGACGCACAAA +
Preference number: 5 (lower is better)
Translates to: MQGWFRFITTTILGSTASPELLV*VARTHK
Trigger: TTTGTGCGTCCTCGCCACCAAAACCAAGAGTTCTGG...AGAGGCTGTGCTGCCCAGTATGGTGGTTGTGATAAATCTAAACCAGCCCTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR CAA 90 bp CAACCACCATACTGGGCAGCACAGCCTCTTAGAATGAGAGCCAGATTCTTGAGTGGAGGACTCCAGGGCTaGTCTGAACCTTCTGGAAAA +
Preference number: 5 (lower is better)
Translates to: QPPYWAAQPLRMRARFLSGGLQG*SEPSGK
Trigger: TTTTCCAGAAGGTTCAGACAAGCCCTGGAGTCCTCC...ACTCAAGAATCTGGCTCTCATTCTAAGAGGCTGTGCTGCCCAGTATGGTGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR CAA 90 bp CTGCTTCCTTTTCCAGGGCAACGTAGGCTGAATACATCCCAAAGTGCTCAGATGCTGTTGGGAGACAGCTaGGACTCTGTTTCATGCAGG +
Preference number: 5 (lower is better)
Translates to: LLPFPGQRRLNTSQSAQMLLGDS*DSVSCR
Trigger: CCTGCATGAAACAGAGTCCAAGCTGTCTCCCAACAG...CATCTGAGCACTTTGGGATGTATTCAGCCTACGTTGCCCTGGAAAAGGAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR CAA 90 bp CTCGAGGAAGCCATAGTGCAGATCGGAATAGGATCCGAGCAGCTTGGCATAGGCATCTGGTATAAACTTTaGCAGCAAGTCACTCACCGG +
Preference number: 5 (lower is better)
Translates to: LEEAIVQIGIGSEQLGIGIWYKL*QQVTHR
Trigger: CCGGTGAGTGACTTGCTGCAAAAGTTTATACCAGAT...GCCTATGCCAAGCTGCTCGGATCCTATTCCGATCTGCACTATGGCTTCCTCGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485248.2
CDS-3UTR CAA 90 bp AGGTGGCCGAGTAGGAGAAGGAAAGGTTTCACGGGGTACTGCCAATTGCTTGTTGTGCACATAGGTGGTTaGGCAGCAAGGATGCTGTAT +
Preference number: 5 (lower is better)
Translates to: RWPSRRRKGFTGYCQLLVVHIGG*AARMLY
Trigger: ATACAGCATCCTTGCTGCCAAACCACCTATGTGCAC...AACAAGCAATTGGCAGTACCCCGTGAAACCTTTCCTTCTCCTACTCGGCCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS TCA 90 bp CCTCCTTGTTGGATGTCAAATCTGCTTATATCATCCAGGATGAAGTaGGGAGGACCCCCTGGTAGATCCTGTGGCCGCTTCCATATCACA +
Preference number: 5 (lower is better)
Translates to: PPCWMSNLLISSRMK*GGPPGRSCGRFHIT
Trigger: TGTGATATGGAAGCGGCCACAGGATCTACCAGGGGGTCCTCCTCACTTCATCCTGGATGATATAAGCAGATTTGACATCCAACAAGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295055.12
ENST00000458085.6
ENST00000465960.2
ENST00000485248.2
CDS TCA 90 bp GCCACATTGCCAGAACCGGAAACGGAAAATGCCAGCATACTGGTGTaGAAAGCTTTGGACCATCAGGATCTTCTGCCTGTACTGTGGGTT +
Preference number: 5 (lower is better)
Translates to: ATLPEPETENASILV*KALDHQDLLPVLWV
Trigger: AACCCACAGTACAGGCAGAAGATCCTGATGGTCCAAAGCTTTTCACACCAGTATGCTGGCATTTTCCGTTTCCGGTTCTGGCAATGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295055.12
ENST00000458085.6
ENST00000465960.2
CDS-3UTR CAA 90 bp ATGGCTGCTCAGGTGCCTGTCACTGTCTGGCATTTTCAGGAAGATTCGGAGCAAAGCTGCGCCTCCTTGTaGGATGTCAAATCTGCTTAT +
Preference number: 5 (lower is better)
Translates to: MAAQVPVTVWHFQEDSEQSCASL*DVKSAY
Trigger: ATAAGCAGATTTGACATCCAACAAGGAGGCGCAGCT...TTGCTCCGAATCTTCCTGAAAATGCCAGACAGTGACAGGCACCTGAGCAGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR CAA 90 bp GAAGGAAAGGTTTCACGGGGTACTGCCAATTGCTTGTTTAAAGATTTAGAGGGCCACCCACTGGCCACATaGCCAGAACCGGAAACGGAA +
Preference number: 5 (lower is better)
Translates to: EGKVSRGTANCLFKDLEGHPLAT*PEPETE
Trigger: TTCCGTTTCCGGTTCTGGCAATGTGGCCAGTGGGTG...GCCCTCTAAATCTTTAAACAAGCAATTGGCAGTACCCCGTGAAACCTTTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR CAA 90 bp CCATTAAGGAAATCCTGTGTGCACATAGGTGGTTTGGCAGCAAGGATGCTGTATGAGTGCAGATGGATGTaGGTGATCACGCCTCCTGTG +
Preference number: 5 (lower is better)
Translates to: PLRKSCVHIGGLAARMLYECRWM*VITPPV
Trigger: CACAGGAGGCGTGATCACCAACATCCATCTGCACTC...ATACAGCATCCTTGCTGCCAAACCACCTATGTGCACACAGGATTTCCTTAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR CAA 90 bp GCTGAATACATCCCAAAGTGCTCAGATGAGCTGCTTGGTGGCCACAGGCTTAACCACAGAGAAGTTGAATaGAGCATCATTCCGAGGTCC +
Preference number: 5 (lower is better)
Translates to: AEYIPKCSDELLGGHRLNHREVE*SIIPRS
Trigger: GGACCTCGGAATGATGCTCAATTCAACTTCTCTGTG...GTTAAGCCTGTGGCCACCAAGCAGCTCATCTGAGCACTTTGGGATGTATTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR CAA 90 bp GCTGAATACATCCCAAAGTGCTCAGATGAGCTGCTTGGTGGCCACAGGCTTAACTCCTCTTTGCTTCAGTaGTACATGACCAGGCTCATC +
Preference number: 5 (lower is better)
Translates to: AEYIPKCSDELLGGHRLNSSLLQ*YMTRLI
Trigger: GATGAGCCTGGTCATGTACAACTGAAGCAAAGAGGA...GTTAAGCCTGTGGCCACCAAGCAGCTCATCTGAGCACTTTGGGATGTATTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR CAA 90 bp GCAAACACCCAGTGGACAGCTCTTGTGTCACCCATAGCACCCGAGGGTGGTCAATTGGTGGTAGTTATCTaGATTGAATTGGGGACTTGT +
Preference number: 5 (lower is better)
Translates to: ANTQWTALVSPIAPEGGQLVVVI*IELGTC
Trigger: ACAAGTCCCCAATTCAATCAAGATAACTACCACCAA...TTGACCACCCTCGGGTGCTATGGGTGACACAAGAGCTGTCCACTGGGTGTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450650.5
CDS-3UTR CAA 90 bp AGCCATAGTGCAGATCGGAATAGGATCCGAGCAGCTTGGCATAGGCCTTCTCCAAACTGCGCCTCCTTGTaGGATGTCAAATCTGCTTAT +
Preference number: 5 (lower is better)
Translates to: SHSADRNRIRAAWHRPSPNCASL*DVKSAY
Trigger: ATAAGCAGATTTGACATCCAACAAGGAGGCGCAGTT...TGGAGAAGGCCTATGCCAAGCTGCTCGGATCCTATTCCGATCTGCACTATGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485248.2
CDS CCA 90 bp CGCTTCCATATCACATTGGAGAGGCGTTTTTCCTGGAGCAGCTTCTaGCCTATGGAAGAATCTGCTGCAGGGAATGTCTCATCCTTAAAC +
Preference number: 5 (lower is better)
Translates to: RFHITLERRFSWSSF*PMEESAAGNVSSLN
Trigger: GTTTAAGGATGAGACATTCCCTGCAGCAGATTCTTCCATAGGCCAGAAGCTGCTCCAGGAAAAACGCCTCTCCAATGTGATATGGAAGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295055.12
ENST00000458085.6
ENST00000465960.2
ENST00000485248.2
CDS CCA 90 bp GGTCCTTTCCAGGCACAGCAGAACTCCAGCTCTGTCATTTGCATCTaGTATAAACTTTTGCAGCAAGTCACTCACCGGTCCCTCACTTTT +
Preference number: 5 (lower is better)
Translates to: GPFQAQQNSSSVICI*YKLLQQVTHRSLTF
Trigger: AAAAGTGAGGGACCGGTGAGTGACTTGCTGCAAAAGTTTATACCAGATGCAAATGACAGAGCTGGAGTTCTGCTGTGCCTGGAAAGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458085.6
ENST00000485248.2
CDS-3UTR CAA 90 bp TTAACGGTAAGAGGCTCATTGTGCAGAGCCCCTGGCAGCTATTTTATTCTGACACCAGAACTCTTGGTTTaGGTGGCGAGGACGCACAAA +
Preference number: 5 (lower is better)
Translates to: LTVRGSLCRAPGSYFILTPELLV*VARTHK
Trigger: TTTGTGCGTCCTCGCCACCAAAACCAAGAGTTCTGG...TGTCAGAATAAAATAGCTGCCAGGGGCTCTGCACAATGAGCCTCTTACCGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR CAA 90 bp AGGCTGAATACATCCCAAAGTGCTCAGATGAGCTGCTTGGTGGCCACAGGCTTACTTCCTAAACATTATTaGGGACCATCCTTCGTGGAG +
Preference number: 5 (lower is better)
Translates to: RLNTSQSAQMSCLVATGLLPKHY*GPSFVE
Trigger: CTCCACGAAGGATGGTCCCAAATAATGTTTAGGAAG...TAAGCCTGTGGCCACCAAGCAGCTCATCTGAGCACTTTGGGATGTATTCAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295055.12
CDS-3UTR CAA 90 bp CTGCTCAGGTGCCTGTCACTGTCTGGCATTTTCAGGAAGATTCGGAGCAAGAACGCCAGCCAGAATCACTaGGAAATCGAGTGGAAATTT +
Preference number: 5 (lower is better)
Translates to: LLRCLSLSGIFRKIRSKNASQNH*EIEWKF
Trigger: AAATTTCCACTCGATTTCCAAGTGATTCTGGCTGGC...GTTCTTGCTCCGAATCTTCCTGAAAATGCCAGACAGTGACAGGCACCTGAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR CAA 90 bp TTAGATTTATCACAACCACCATACTGGGCAGCACAGCCTCTTAGAATGAGAGCCCCCTTCATTCTGAGGTaGAAATGGCTGCTCAGGTGC +
Preference number: 5 (lower is better)
Translates to: LDLSQPPYWAAQPLRMRAPFILR*KWLLRC
Trigger: GCACCTGAGCAGCCATTTCAACCTCAGAATGAAGGG...GGCTCTCATTCTAAGAGGCTGTGCTGCCCAGTATGGTGGTTGTGATAAATCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR CAA 90 bp ATGCAGGGCTGGTTTAGATTTATCACAACCACCATACTGGGCAGCACAGCCTCTGGTCTGCTTTCCTCTTaGCTTCAGTTGTACATGACC +
Preference number: 5 (lower is better)
Translates to: MQGWFRFITTTILGSTASGLLSS*LQLYMT
Trigger: GGTCATGTACAACTGAAGCAAAGAGGAAAGCAGACC...AGAGGCTGTGCTGCCCAGTATGGTGGTTGTGATAAATCTAAACCAGCCCTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR CAA 90 bp CAGCCTCTTAGAATGAGAGCCAGATTCTTGAGTGATCACTGGGAGCTTGTCCTGGGTCTGCTTTCCTCTTaGCTTCAGTTGTACATGACC +
Preference number: 5 (lower is better)
Translates to: QPLRMRARFLSDHWELVLGLLSS*LQLYMT
Trigger: GGTCATGTACAACTGAAGCAAAGAGGAAAGCAGACC...CAGGACAAGCTCCCAGTGATCACTCAAGAATCTGGCTCTCATTCTAAGAGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR CAA 90 bp CTGCTTCCTTTTCCAGGGCAACGTAGGCTGAATACATCCCAAAGTGCTCAGATGATGAGAGCCAGATTCTaGAGTGATCACTGGGAGCTT +
Preference number: 5 (lower is better)
Translates to: LLPFPGQRRLNTSQSAQMMRARF*SDHWEL
Trigger: AAGCTCCCAGTGATCACTCAAGAATCTGGCTCTCAT...CATCTGAGCACTTTGGGATGTATTCAGCCTACGTTGCCCTGGAAAAGGAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR CAA 90 bp TTAGATTTATCACAACCACCATACTGGGCAGCACAGCCTCTTAGAATGAGAGCCCTGTTGGGAGACAGCTaGGACTCTGTTTCATGCAGG +
Preference number: 5 (lower is better)
Translates to: LDLSQPPYWAAQPLRMRALLGDS*DSVSCR
Trigger: CCTGCATGAAACAGAGTCCAAGCTGTCTCCCAACAG...GGCTCTCATTCTAAGAGGCTGTGCTGCCCAGTATGGTGGTTGTGATAAATCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR CAA 90 bp TTATCACAACCACCATACTGGGCAGCACAGCCTCTTAGAATGAGAGCCAGATTCTCCTCTTTGCTTCAGTaGTACATGACCAGGCTCATC +
Preference number: 5 (lower is better)
Translates to: LSQPPYWAAQPLRMRARFSSLLQ*YMTRLI
Trigger: GATGAGCCTGGTCATGTACAACTGAAGCAAAGAGGA...GAATCTGGCTCTCATTCTAAGAGGCTGTGCTGCCCAGTATGGTGGTTGTGATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000450650.5
CDS-3UTR CAA 90 bp TTCCTCTTTGCTTCAGTTGTACATGACCAGGCTCATCCACTCCATTTCTGTCAGCACTGTGAGGACCATTaGGATTCCTCTGTGGGAGAT +
Preference number: 5 (lower is better)
Translates to: FLFASVVHDQAHPLHFCQHCEDH*DSSVGD
Trigger: ATCTCCCACAGAGGAATCCAAATGGTCCTCACAGTG...CTGACAGAAATGGAGTGGATGAGCCTGGTCATGTACAACTGAAGCAAAGAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450650.5
CDS-3UTR CAA 90 bp GGTACTGCCAATTGCTTGTTTAAAGATTTAGAGGGCAATGCACCTCACACCCCACACAGAGAAGTTGAATaGAGCATCATTCCGAGGTCC +
Preference number: 5 (lower is better)
Translates to: GTANCLFKDLEGNAPHTPHREVE*SIIPRS
Trigger: GGACCTCGGAATGATGCTCAATTCAACTTCTCTGTG...TGGGGTGTGAGGTGCATTGCCCTCTAAATCTTTAAACAAGCAATTGGCAGTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS-3UTR CAA 90 bp GATCCAGGAAGAGAGGCAGGTAAAATAGTCCATCAAGTCACTTCTCCTCTCTGCATCTGGTATAAACTTTaGCAGCAAGTCACTCACCGG +
Preference number: 5 (lower is better)
Translates to: DPGREAGKIVHQVTSPLCIWYKL*QQVTHR
Trigger: CCGGTGAGTGACTTGCTGCAAAAGTTTATACCAGAT...GCAGAGAGGAGAAGTGACTTGATGGACTATTTTACCTGCCTCTCTTCCTGGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS CCA 90 bp CCTCCTGCAGTGTTTCCTAGAATCACTTGCTTCCTAAACATTATTTaGGACCATCCTTCGTGGAGTGTGTTTCCATGGTCCAGGGTAATT +
Preference number: 5 (lower is better)
Translates to: PPAVFPRITCFLNII*DHPSWSVFPWSRVI
Trigger: AATTACCCTGGACCATGGAAACACACTCCACGAAGGATGGTCCCAAATAATGTTTAGGAAGCAAGTGATTCTAGGAAACACTGCAGGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000458085.6
CDS CCA 90 bp TTGGGACCATCCTTCGTGGAGTGTGTTTCCATGGTCCAGGGTAATTaGAATTTCGCTACATATAAACATGGCGATGAATTTCTGTTGGAA +
Preference number: 5 (lower is better)
Translates to: LGPSFVECVSMVQGN*NFATYKHGDEFLLE
Trigger: TTCCAACAGAAATTCATCGCCATGTTTATATGTAGCGAAATTCCAATTACCCTGGACCATGGAAACACACTCCACGAAGGATGGTCCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000458085.6
CDS-3UTR CAA 90 bp GAAGGAAAGGTTTCACGGGGTACTGCCAATTGCTTGTTTAAAGATTTAGAGGGCGGTACTGCCAATTGCTaGTTTAAAGATTTAGAGGGC +
Preference number: 5 (lower is better)
Translates to: EGKVSRGTANCLFKDLEGGTANC*FKDLEG
Trigger: GCCCTCTAAATCTTTAAACAAGCAATTGGCAGTACC...GCCCTCTAAATCTTTAAACAAGCAATTGGCAGTACCCCGTGAAACCTTTCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458085.6
CDS CCA 90 bp TTCCTAAACATTATTTGGGACCATCCTTCGTGGAGTGTGTTTCCATaGTCCAGGGTAATTGGAATTTCGCTACATATAAACATGGCGATG +
Preference number: 5 (lower is better)
Translates to: FLNIIWDHPSWSVFP*SRVIGISLHINMAM
Trigger: CATCGCCATGTTTATATGTAGCGAAATTCCAATTACCCTGGACCATGGAAACACACTCCACGAAGGATGGTCCCAAATAATGTTTAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000458085.6
CDS TCA 90 bp CAAAACAATCGAGTTTTAGGTGATATTGATCACAGGTCGGCTGCGTaGAGAACTGTATACTTCGAAGGTATATTGGCACATAGAGAATGG +
Preference number: 5 (lower is better)
Translates to: QNNRVLGDIDHRSAA*RTVYFEGILAHREW
Trigger: CCATTCTCTATGTGCCAATATACCTTCGAAGTATACAGTTCTTCACGCAGCCGACCTGTGATCAATATCACCTAAAACTCGATTGTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490786.1
CDS GCA 72 bp CTGCCTGTACTGTGGGTTCTGAGTCAAGGATCCCAGTaGTGCCAGGAACCAGCAGTCAGCTGCGCCTCCTTG +
Preference number: 6 (lower is better)
Translates to: LPVLWVLSQGSQ*CQEPAVSCASL
Trigger: CAAGGAGGCGCAGCTGACTGCTGGTTCCTGGCAGCACTGGGATCCTTGACTCAGAACCCACAGTACAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295055.12
ENST00000458085.6
ENST00000465960.2
CDS GCA 72 bp TGGCCCACTTGGAGTGGCACAGGTTATCAGGGAGCCTaGCTTGGTCGCTGTCTTCACTGCCTTCACCAGGTC +
Preference number: 6 (lower is better)
Translates to: WPTWSGTGYQGA*LGRCLHCLHQV
Trigger: GACCTGGTGAAGGCAGTGAAGACAGCGACCAAGGCAGGCTCCCTGATAACCTGTGCCACTCCAAGTGGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295055.12
ENST00000458085.6
ENST00000465960.2
CDS CCA 72 bp GAGACTGGCAGAGGAGGAGAGCATGGCCGGCCGTCTTaGAGAAAGAGCAGTGCTGGTGTCTGCTTACTCCTG +
Preference number: 6 (lower is better)
Translates to: ETGRGGEHGRPS*RKSSAGVCLLL
Trigger: CAGGAGTAAGCAGACACCAGCACTGCTCTTTCTCCAAGACGGCCGGCCATGCTCTCCTCCTCTGCCAGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465960.2
CDS GCA 72 bp CCTGTACTGTGGGTTCTGAGTCAAGGATCCCAGTGCTaGCAGGAACCAGCAGTCAGCTGCGCCTCCTTGTTG +
Preference number: 6 (lower is better)
Translates to: PVLWVLSQGSQC*QEPAVSCASLL
Trigger: CAACAAGGAGGCGCAGCTGACTGCTGGTTCCTGGCAGCACTGGGATCCTTGACTCAGAACCCACAGTACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295055.12
ENST00000458085.6
ENST00000465960.2
CDS GCA 72 bp GGCATGGAGACTCACCAGCCCATTCTCCATCGCCTGTaGTGTATCTGTTGGCCCACTTGGAGTGGCACAGGT +
Preference number: 6 (lower is better)
Translates to: GMETHQPILHRL*CICWPTWSGTG
Trigger: ACCTGTGCCACTCCAAGTGGGCCAACAGATACAGCACAGGCGATGGAGAATGGGCTGGTGAGTCTCCATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295055.12
ENST00000458085.6
ENST00000465960.2
CDS CAA 72 bp TTCACCAGGTCCACAGGGGAAGAGTGCAGATGGATGTaGGTGATCACGCCTCCTGTGAGGTCCACCAGGGCA +
Preference number: 6 (lower is better)
Translates to: FTRSTGEECRWM*VITPPVRSTRA
Trigger: TGCCCTGGTGGACCTCACAGGAGGCGTGATCACCAACATCCATCTGCACTCTTCCCCTGTGGACCTGGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295055.12
ENST00000458085.6
ENST00000465960.2
CDS GCA 72 bp AGGAGAGCATGGCCGGCCGTCTTGGAGAAAGAGCAGTaGTGGTGTCTGCTTACTCCTGACCTCAGGCTTTTC +
Preference number: 6 (lower is better)
Translates to: RRAWPAVLEKEQ*WCLLTPDLRLF
Trigger: GAAAAGCCTGAGGTCAGGAGTAAGCAGACACCAGCACTGCTCTTTCTCCAAGACGGCCGGCCATGCTCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465960.2
CDS CAA 72 bp CCCCCTGGTAGATCCTGTGGCCGCTTCCATATCACATaGGAGAGGCGTTTTTCCTGGAGCAGCTTCTGGCCT +
Preference number: 6 (lower is better)
Translates to: PPGRSCGRFHIT*ERRFSWSSFWP
Trigger: AGGCCAGAAGCTGCTCCAGGAAAAACGCCTCTCCAATGTGATATGGAAGCGGCCACAGGATCTACCAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295055.12
ENST00000458085.6
ENST00000465960.2
ENST00000485248.2
CDS TCA 72 bp TGGACCATCAGGATCTTCTGCCTGTACTGTGGGTTCTaGGTCAAGGATCCCAGTGCTGCCAGGAACCAGCAG +
Preference number: 6 (lower is better)
Translates to: WTIRIFCLYCGF*VKDPSAARNQQ
Trigger: CTGCTGGTTCCTGGCAGCACTGGGATCCTTGACTCAGAACCCACAGTACAGGCAGAAGATCCTGATGGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295055.12
ENST00000458085.6
ENST00000465960.2
CDS CCA 72 bp CCCCTGGTAGATCCTGTGGCCGCTTCCATATCACATTaGAGAGGCGTTTTTCCTGGAGCAGCTTCTGGCCTA +
Preference number: 6 (lower is better)
Translates to: PLVDPVAASISH*RGVFPGAASGL
Trigger: TAGGCCAGAAGCTGCTCCAGGAAAAACGCCTCTCCAATGTGATATGGAAGCGGCCACAGGATCTACCAGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295055.12
ENST00000458085.6
ENST00000465960.2
ENST00000485248.2
CDS CCA 72 bp AGAGCATGGCCGGCCGTCTTGGAGAAAGAGCAGTGCTaGTGTCTGCTTACTCCTGACCTCAGGCTTTTCCTT +
Preference number: 6 (lower is better)
Translates to: RAWPAVLEKEQC*CLLTPDLRLFL
Trigger: AAGGAAAAGCCTGAGGTCAGGAGTAAGCAGACACCAGCACTGCTCTTTCTCCAAGACGGCCGGCCATGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465960.2
CDS TCA 72 bp GTCTCATCCTTAAACGTCCGGCCCATGCTCAGGCAGTaGTCCCGCAAGGTGGTAAAGTCCTGGTCTTTGAAC +
Preference number: 6 (lower is better)
Translates to: VSSLNVRPMLRQ*SRKVVKSWSLN
Trigger: GTTCAAAGACCAGGACTTTACCACCTTGCGGGATCACTGCCTGAGCATGGGCCGGACGTTTAAGGATGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295055.12
ENST00000458085.6
ENST00000465960.2
ENST00000485248.2
CDS TCA 72 bp TGGAGGTCTCCACTGAAGGCTCCTGGTAATACGCCATaGCTCTCCTTAGAAGACTTCCGAGGTCCTTTCCTG +
Preference number: 6 (lower is better)
Translates to: WRSPLKAPGNTP*LSLEDFRGPFL
Trigger: CAGGAAAGGACCTCGGAAGTCTTCTAAGGAGAGTCATGGCGTATTACCAGGAGCCTTCAGTGGAGACCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000465960.2
CDS TCA 72 bp TGGAGGTCTCCACTGAAGGCTCCTGGTAATACGCCATaGCTCTCCTTAGAAGACTTCCGAGGTCCTTTCCAG +
Preference number: 6 (lower is better)
Translates to: WRSPLKAPGNTP*LSLEDFRGPFQ
Trigger: CTGGAAAGGACCTCGGAAGTCTTCTAAGGAGAGTCATGGCGTATTACCAGGAGCCTTCAGTGGAGACCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458085.6
ENST00000485248.2
CDS GCA 72 bp TTCCTGGAGCAGCTTCTGGCCTATGGAAGAATCTGCTaGAGGGAATGTCTCATCCTTAAACGTCCGGCCCAT +
Preference number: 6 (lower is better)
Translates to: FLEQLLAYGRIC*RECLILKRPAH
Trigger: ATGGGCCGGACGTTTAAGGATGAGACATTCCCTGCAGCAGATTCTTCCATAGGCCAGAAGCTGCTCCAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295055.12
ENST00000458085.6
ENST00000465960.2
ENST00000485248.2
CDS CCA 72 bp GGCCGCTTCCATATCACATTGGAGAGGCGTTTTTCCTaGAGCAGCTTCTGGCCTATGGAAGAATCTGCTGCA +
Preference number: 6 (lower is better)
Translates to: GRFHITLERRFS*SSFWPMEESAA
Trigger: TGCAGCAGATTCTTCCATAGGCCAGAAGCTGCTCCAGGAAAAACGCCTCTCCAATGTGATATGGAAGCGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295055.12
ENST00000458085.6
ENST00000465960.2
ENST00000485248.2
CDS CAA 90 bp AGCAACTGTGACGCACACGACAACATTGGTGCCTTCCATTGGCTCTaGCACAGAGAAGTTGAATTGAGCATCATTCCGAGGTCCTCCTGC +
Preference number: 6 (lower is better)
Translates to: SNCDAHDNIGAFHWL*HREVELSIIPRSSC
Trigger: GCAGGAGGACCTCGGAATGATGCTCAATTCAACTTCTCTGTGCAAGAGCCAATGGAAGGCACCAATGTTGTCGTGTGCGTCACAGTTGCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000458085.6
CDS TCA 72 bp TGGATGTCAAATCTGCTTATATCATCCAGGATGAAGTaGGGAGGACCCCCTGGTAGATCCTGTGGCCGCTTC +
Preference number: 6 (lower is better)
Translates to: WMSNLLISSRMK*GGPPGRSCGRF
Trigger: GAAGCGGCCACAGGATCTACCAGGGGGTCCTCCTCACTTCATCCTGGATGATATAAGCAGATTTGACATCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295055.12
ENST00000458085.6
ENST00000465960.2
ENST00000485248.2
CDS TCA 72 bp TACCAGGTAAAGGCAGGCTCCACCTTCGTTAAACAGTaGCTTCAGCATTGGGCAGTGGCCTGCCACCTATTT +
Preference number: 6 (lower is better)
Translates to: YQVKAGSTFVKQ*LQHWAVACHLF
Trigger: AAATAGGTGGCAGGCCACTGCCCAATGCTGAAGTCACTGTTTAACGAAGGTGGAGCCTGCCTTTACCTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465960.2
CDS GCA 72 bp TTTTTCCTGGAGCAGCTTCTGGCCTATGGAAGAATCTaGTGCAGGGAATGTCTCATCCTTAAACGTCCGGCC +
Preference number: 6 (lower is better)
Translates to: FFLEQLLAYGRI*CRECLILKRPA
Trigger: GGCCGGACGTTTAAGGATGAGACATTCCCTGCAGCAGATTCTTCCATAGGCCAGAAGCTGCTCCAGGAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295055.12
ENST00000458085.6
ENST00000465960.2
ENST00000485248.2
CDS CCA 72 bp AAAGCTTTGGACCATCAGGATCTTCTGCCTGTACTGTaGGTTCTGAGTCAAGGATCCCAGTGCTGCCAGGAA +
Preference number: 6 (lower is better)
Translates to: KALDHQDLLPVL*VLSQGSQCCQE
Trigger: TTCCTGGCAGCACTGGGATCCTTGACTCAGAACCCACAGTACAGGCAGAAGATCCTGATGGTCCAAAGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295055.12
ENST00000458085.6
ENST00000465960.2
CDS CCA 72 bp ATCCAAAACTCGCCATCTTCCCGTTTCTTATGTAGCTaGCTTTTCCGCGGATCACAGGTTTCCTCCCACTCC +
Preference number: 6 (lower is better)
Translates to: IQNSPSSRFLCS*LFRGSQVSSHS
Trigger: GGAGTGGGAGGAAACCTGTGATCCGCGGAAAAGCCAGCTACATAAGAAACGGGAAGATGGCGAGTTTTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000458085.6
CDS CAA 90 bp GCATTTCCATCTGGCAATGGACCCATCCTGTTTGTGGTCTGGTTCTaGGTTCATAGACTTTCTCGCTCCCCCTTTATGGTGAGCTGCTCT +
Preference number: 6 (lower is better)
Translates to: AFPSGNGPILFVVWF*VHRLSRSPFMVSCS
Trigger: AGAGCAGCTCACCATAAAGGGGGAGCGAGAAAGTCTATGAACCAAGAACCAGACCACAAACAGGATGGGTCCATTGCCAGATGGAAATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465450.2
CDS TCA 72 bp CTTGGAGAAAGAGCAGTGCTGGTGTCTGCTTACTCCTaGCCTCAGGCTTTTCCTTATATGGGTGTACCAGGT +
Preference number: 6 (lower is better)
Translates to: LGERAVLVSAYS*PQAFPYMGVPG
Trigger: ACCTGGTACACCCATATAAGGAAAAGCCTGAGGTCAGGAGTAAGCAGACACCAGCACTGCTCTTTCTCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465960.2
CDS CCA 72 bp ATCACATTGGAGAGGCGTTTTTCCTGGAGCAGCTTCTaGCCTATGGAAGAATCTGCTGCAGGGAATGTCTCA +
Preference number: 6 (lower is better)
Translates to: ITLERRFSWSSF*PMEESAAGNVS
Trigger: TGAGACATTCCCTGCAGCAGATTCTTCCATAGGCCAGAAGCTGCTCCAGGAAAAACGCCTCTCCAATGTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295055.12
ENST00000458085.6
ENST00000465960.2
ENST00000485248.2
CDS CCA 72 bp CAGGCACAGCAGAACTCCAGCTCTGTCATTTGCATCTaGTATAAACTTTTGCAGCAAGTCACTCACCGGTCC +
Preference number: 6 (lower is better)
Translates to: QAQQNSSSVICI*YKLLQQVTHRS
Trigger: GGACCGGTGAGTGACTTGCTGCAAAAGTTTATACCAGATGCAAATGACAGAGCTGGAGTTCTGCTGTGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458085.6
ENST00000485248.2
CDS CCA 72 bp TGTCTGCTTACTCCTGACCTCAGGCTTTTCCTTATATaGGTGTACCAGGTAAAGGCAGGCTCCACCTTCGTT +
Preference number: 6 (lower is better)
Translates to: CLLTPDLRLFLI*VYQVKAGSTFV
Trigger: AACGAAGGTGGAGCCTGCCTTTACCTGGTACACCCATATAAGGAAAAGCCTGAGGTCAGGAGTAAGCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465960.2
CDS CAA 72 bp GACGCACACGACAACATTGGTGCCTTCCATTGGCTCTaGCACAGAGAAGTTGAATTGAGCATCATTCCGAGG +
Preference number: 6 (lower is better)
Translates to: DAHDNIGAFHWL*HREVELSIIPR
Trigger: CCTCGGAATGATGCTCAATTCAACTTCTCTGTGCAAGAGCCAATGGAAGGCACCAATGTTGTCGTGTGCGTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000458085.6
CDS CAA 72 bp TCTGGCAATGGACCCATCCTGTTTGTGGTCTGGTTCTaGGTTCATAGACTTTCTCGCTCCCCCTTTATGGTG +
Preference number: 6 (lower is better)
Translates to: SGNGPILFVVWF*VHRLSRSPFMV
Trigger: CACCATAAAGGGGGAGCGAGAAAGTCTATGAACCAAGAACCAGACCACAAACAGGATGGGTCCATTGCCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465450.2
CDS TCA 72 bp CCAGAACCGGAAACGGAAAATGCCAGCATACTGGTGTaGAAAGCTTTGGACCATCAGGATCTTCTGCCTGTA +
Preference number: 6 (lower is better)
Translates to: PEPETENASILV*KALDHQDLLPV
Trigger: TACAGGCAGAAGATCCTGATGGTCCAAAGCTTTTCACACCAGTATGCTGGCATTTTCCGTTTCCGGTTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295055.12
ENST00000458085.6
ENST00000465960.2
CDS CCA 72 bp TTTACAATCCCAGAGGGTTCTGTACCTGTCACTGTCTaGCATTTTCAGGAAGATTCGGAGCAAGAACTCCGC +
Preference number: 6 (lower is better)
Translates to: FTIPEGSVPVTV*HFQEDSEQELR
Trigger: GCGGAGTTCTTGCTCCGAATCTTCCTGAAAATGCCAGACAGTGACAGGTACAGAACCCTCTGGGATTGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465450.2
CDS CCA 72 bp TTGCATTTCCATCTGGCAATGGACCCATCCTGTTTGTaGTCTGGTTCTTGGTTCATAGACTTTCTCGCTCCC +
Preference number: 6 (lower is better)
Translates to: LHFHLAMDPSCL*SGSWFIDFLAP
Trigger: GGGAGCGAGAAAGTCTATGAACCAAGAACCAGACCACAAACAGGATGGGTCCATTGCCAGATGGAAATGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465450.2
CDS GCA 72 bp TTCCGAGGTCCTCCTGCAGTGTTTCCTAGAATCACTTaGTTCCTAAACATTATTTGGGACCATCCTTCGTGG +
Preference number: 6 (lower is better)
Translates to: FRGPPAVFPRIT*FLNIIWDHPSW
Trigger: CCACGAAGGATGGTCCCAAATAATGTTTAGGAAGCAAGTGATTCTAGGAAACACTGCAGGAGGACCTCGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000458085.6
CDS GCA 72 bp CCTTTCCAGGCACAGCAGAACTCCAGCTCTGTCATTTaGATCTGGTATAAACTTTTGCAGCAAGTCACTCAC +
Preference number: 6 (lower is better)
Translates to: PFQAQQNSSSVI*IWYKLLQQVTH
Trigger: GTGAGTGACTTGCTGCAAAAGTTTATACCAGATGCAAATGACAGAGCTGGAGTTCTGCTGTGCCTGGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458085.6
ENST00000485248.2
CDS CCA 72 bp AAACGGAAAATGCCAGCATACTGGTGTGAAAAGCTTTaGACCATCAGGATCTTCTGCCTGTACTGTGGGTTC +
Preference number: 6 (lower is better)
Translates to: KRKMPAYWCEKL*TIRIFCLYCGF
Trigger: GAACCCACAGTACAGGCAGAAGATCCTGATGGTCCAAAGCTTTTCACACCAGTATGCTGGCATTTTCCGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295055.12
ENST00000458085.6
ENST00000465960.2
CDS CCA 72 bp ACTGTATACTTCGAAGGTATATTGGCACATAGAGAATaGTCACCAGGAGGTCTGAGCCATGGGTCTGCTTTC +
Preference number: 6 (lower is better)
Translates to: TVYFEGILAHRE*SPGGLSHGSAF
Trigger: GAAAGCAGACCCATGGCTCAGACCTCCTGGTGACCATTCTCTATGTGCCAATATACCTTCGAAGTATACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490786.1
CDS GCA 72 bp ACTCCAGCTCTGTCATTTGCATCTGGTATAAACTTTTaGAGCAAGTCACTCACCGGTCCCTCACTTTTTCCA +
Preference number: 6 (lower is better)
Translates to: TPALSFASGINF*SKSLTGPSLFP
Trigger: TGGAAAAAGTGAGGGACCGGTGAGTGACTTGCTGCAAAAGTTTATACCAGATGCAAATGACAGAGCTGGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458085.6
ENST00000485248.2
CDS CCA 72 bp GTGTTTCCTAGAATCACTTGCTTCCTAAACATTATTTaGGACCATCCTTCGTGGAGTGTGTTTCCATGGTCC +
Preference number: 6 (lower is better)
Translates to: VFPRITCFLNII*DHPSWSVFPWS
Trigger: GGACCATGGAAACACACTCCACGAAGGATGGTCCCAAATAATGTTTAGGAAGCAAGTGATTCTAGGAAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000458085.6
CDS TCA 72 bp CGAGTTTTAGGTGATATTGATCACAGGTCGGCTGCGTaGAGAACTGTATACTTCGAAGGTATATTGGCACAT +
Preference number: 6 (lower is better)
Translates to: RVLGDIDHRSAA*RTVYFEGILAH
Trigger: ATGTGCCAATATACCTTCGAAGTATACAGTTCTTCACGCAGCCGACCTGTGATCAATATCACCTAAAACTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490786.1
CDS CCA 72 bp ATTATTTGGGACCATCCTTCGTGGAGTGTGTTTCCATaGTCCAGGGTAATTGGAATTTCGCTACATATAAAC +
Preference number: 6 (lower is better)
Translates to: IIWDHPSWSVFP*SRVIGISLHIN
Trigger: GTTTATATGTAGCGAAATTCCAATTACCCTGGACCATGGAAACACACTCCACGAAGGATGGTCCCAAATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000458085.6
CDS CAA 90 bp GGTAATTGGAATTTCGCTACATATAAACATGGCGATGAATTTCTGTaGGAAATCTTGACACGACATCCAAAACTCGCCATCTTCCCGTTT +
Preference number: 6 (lower is better)
Translates to: GNWNFATYKHGDEFL*EILTRHPKLAIFPF
Trigger: AAACGGGAAGATGGCGAGTTTTGGATGTCGTGTCAAGATTTCCAACAGAAATTCATCGCCATGTTTATATGTAGCGAAATTCCAATTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000458085.6
CDS CAA 72 bp ACATATAAACATGGCGATGAATTTCTGTTGGAAATCTaGACACGACATCCAAAACTCGCCATCTTCCCGTTT +
Preference number: 6 (lower is better)
Translates to: TYKHGDEFLLEI*TRHPKLAIFPF
Trigger: AAACGGGAAGATGGCGAGTTTTGGATGTCGTGTCAAGATTTCCAACAGAAATTCATCGCCATGTTTATATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295055.12
ENST00000458085.6