RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CAMK1G (Homo sapiens)

Ensembl gene IDs: ENSG00000008118

Ensembl transcript IDs: ENST00000009105.5, ENST00000361322.3, ENST00000423146.5, ENST00000494990.1, ENST00000651530.1

Found 431 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCTTCTACGCCTTGGGGCTCCCTCCTGGGCCTCCTATGAGGGGCTaGCCCGCTGGCAGCAGGCTGGTGCTTCTGGCCAGAAACTGCTCC +
Preference number: 1 (lower is better)
Translates to: GFYALGLPPGPPMRG*PAGSRLVLLARNCS
Trigger: GGAGCAGTTTCTGGCCAGAAGCACCAGCCTGCTGCCAGCGGGGCAGCCCCTCATAGGAGGCCCAGGAGGGAGCCCCAAGGCGTAGAAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR GCA 90 bp CAGGCAGGTCAGGGAGACCTGGAAGCTGGTGGGCACCGCTTCTCCTaGTCACAGCTTCAACAAGGCTTCTACGCCTTGGGGCTCCCTCCT +
Preference number: 1 (lower is better)
Translates to: QAGQGDLEAGGHRFS*SQLQQGFYALGLPP
Trigger: AGGAGGGAGCCCCAAGGCGTAGAAGCCTTGTTGAAGCTGTGAGCAGGAGAAGCGGTGCCCACCAGCTTCCAGGTCTCCCTGACCTGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR CCA 90 bp GAGAGCTATCTACGTACACTGCACAGAGCCACGGCACGTAGGGTGTaGGGCATAGAGCAGGCAGGTCAGGGAGACCTGGAAGCTGGTGGG +
Preference number: 1 (lower is better)
Translates to: ESYLRTLHRATARRV*GIEQAGQGDLEAGG
Trigger: CCCACCAGCTTCCAGGTCTCCCTGACCTGCCTGCTCTATGCCCCACACCCTACGTGCCGTGGCTCTGTGCAGTGTACGTAGATAGCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR GCA 90 bp TGGTGCTTCTGGCCAGAAACTGCTCCTGCTAAGCCCTGCTCCACTTaGTCTGCCTTCCTCCCTCTGCCGGATAGACACCAGGTTTGGAAG +
Preference number: 1 (lower is better)
Translates to: WCFWPETAPAKPCST*SAFLPLPDRHQVWK
Trigger: CTTCCAAACCTGGTGTCTATCCGGCAGAGGGAGGAAGGCAGAGCAAGTGGAGCAGGGCTTAGCAGGAGCAGTTTCTGGCCAGAAGCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR CCA 90 bp CTCACAGGCAGACCACCATGGGGAGCTGCCTGTCATTCATGCAGATaGGCAGGCAACGACATTAATGAGCCCAATCTGGCCAAGAGGTTG +
Preference number: 1 (lower is better)
Translates to: LTGRPPWGAACHSCR*AGNDINEPNLAKRL
Trigger: CAACCTCTTGGCCAGATTGGGCTCATTAATGTCGTTGCCTGCCCATCTGCATGAATGACAGGCAGCTCCCCATGGTGGTCTGCCTGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR TCA 90 bp TCTCAGCGCACTTGGGAGCTAATCCTGGAGTTAAGGATTAGAACTTaGAGAGCTCACAGGCAGACCACCATGGGGAGCTGCCTGTCATTC +
Preference number: 1 (lower is better)
Translates to: SQRTWELILELRIRT*RAHRQTTMGSCLSF
Trigger: GAATGACAGGCAGCTCCCCATGGTGGTCTGCCTGTGAGCTCTTCAAGTTCTAATCCTTAACTCCAGGATTAGCTCCCAAGTGCGCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR TCA 90 bp GGAGGACATGTGGCCAGGATAAGAATTCCTTGCAGCCCTTACTCATaGACTTCTTTCTATTCCACTTTGGAGGGTGTGGCACTGCTTTTA +
Preference number: 1 (lower is better)
Translates to: GGHVARIRIPCSPYS*TSFYSTLEGVALLL
Trigger: TAAAAGCAGTGCCACACCCTCCAAAGTGGAATAGAAAGAAGTTCATGAGTAAGGGCTGCAAGGAATTCTTATCCTGGCCACATGTCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR GCA 90 bp GAAGAGCTCACAGGCAGACCACCATGGGGAGCTGCCTGTCATTCATGCAGATGGCCTCCTATGAGGGGCTaGCCCGCTGGCAGCAGGCTG +
Preference number: 2 (lower is better)
Translates to: EELTGRPPWGAACHSCRWPPMRG*PAGSRL
Trigger: CAGCCTGCTGCCAGCGGGGCAGCCCCTCATAGGAGG...CCATCTGCATGAATGACAGGCAGCTCCCCATGGTGGTCTGCCTGTGAGCTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR GCA 90 bp GCACCGCTTCTCCTGCTCACAGCTTCAACAAGGCTTCTACGCCTTGGGGCTCCCCTGCTCCACTTGCTCTaGCTTCCTCCCTCTGCCGGA +
Preference number: 2 (lower is better)
Translates to: APLLLLTASTRLLRLGAPLLHLL*LPPSAG
Trigger: TCCGGCAGAGGGAGGAAGGCAGAGCAAGTGGAGCAG...GGGAGCCCCAAGGCGTAGAAGCCTTGTTGAAGCTGTGAGCAGGAGAAGCGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR CCA 90 bp AGAGCTCACAGGCAGACCACCATGGGGAGCTGCCTGTCATTCATGCAGATGGGCCAGGTCAGGGAGACCTaGAAGCTGGTGGGCACCGCT +
Preference number: 2 (lower is better)
Translates to: RAHRQTTMGSCLSFMQMGQVRET*KLVGTA
Trigger: AGCGGTGCCCACCAGCTTCCAGGTCTCCCTGACCTG...GCCCATCTGCATGAATGACAGGCAGCTCCCCATGGTGGTCTGCCTGTGAGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR GCA 90 bp CTCACAGGCAGACCACCATGGGGAGCTGCCTGTCATTCATGCAGATGGGCAGGCGCTCCTGCTAAGCCCTaGTCCACTTGCTCTGCCTTC +
Preference number: 2 (lower is better)
Translates to: LTGRPPWGAACHSCRWAGAPAKP*STCSAF
Trigger: GAAGGCAGAGCAAGTGGAGCAGGGCTTAGCAGGAGC...GCCTGCCCATCTGCATGAATGACAGGCAGCTCCCCATGGTGGTCTGCCTGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR CCA 90 bp AGCCTGGCCAGCCCATTAAGCTTTTCACGACAAACAGCACAGACCCAGGCGAGACTTGGGGCTCCCTCCTaGGCCTCCTATGAGGGGCTG +
Preference number: 2 (lower is better)
Translates to: SLASPLSFSRQTAQTQARLGAPS*ASYEGL
Trigger: CAGCCCCTCATAGGAGGCCCAGGAGGGAGCCCCAAG...TCTCGCCTGGGTCTGTGCTGTTTGTCGTGAAAAGCTTAATGGGCTGGCCAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR CCA 90 bp GAAGAGCTCACAGGCAGACCACCATGGGGAGCTGCCTGTCATTCATGCAGATGGCAGGTCAGGGAGACCTaGAAGCTGGTGGGCACCGCT +
Preference number: 2 (lower is better)
Translates to: EELTGRPPWGAACHSCRWQVRET*KLVGTA
Trigger: AGCGGTGCCCACCAGCTTCCAGGTCTCCCTGACCTG...CCATCTGCATGAATGACAGGCAGCTCCCCATGGTGGTCTGCCTGTGAGCTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR GCA 90 bp GGGGTGGAGGGCGAGGAAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAGAAGGGCCAGAAGTGTaGTGGCTGGGTCTCAGCGCA +
Preference number: 2 (lower is better)
Translates to: GVEGEETGEGQEWCAGLSEGPEV*WLGLSA
Trigger: TGCGCTGAGACCCAGCCAGCACACTTCTGGCCCTTC...TGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTTCCTCGCCCTCCACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR CCA 90 bp ACCGCTTCTCCTGCTCACAGCTTCAACAAGGCTTCTACGCCTTGGGGCTCCCTCGCAGGCTGGTGCTTCTaGCCAGAAACTGCTCCTGCT +
Preference number: 2 (lower is better)
Translates to: TASPAHSFNKASTPWGSLAGWCF*PETAPA
Trigger: AGCAGGAGCAGTTTCTGGCCAGAAGCACCAGCCTGC...GAGGGAGCCCCAAGGCGTAGAAGCCTTGTTGAAGCTGTGAGCAGGAGAAGCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR CCA 90 bp GGGCAGGCAACGACATTAATGAGCCCAATCTGGCCAAGAGGTTGGAGGCTTGAGAAGGCTTCTACGCCTTaGGGCTCCCTCCTGGGCCTC +
Preference number: 2 (lower is better)
Translates to: GQATTLMSPIWPRGWRLEKASTP*GSLLGL
Trigger: GAGGCCCAGGAGGGAGCCCCAAGGCGTAGAAGCCTT...CTCAAGCCTCCAACCTCTTGGCCAGATTGGGCTCATTAATGTCGTTGCCTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR GCA 90 bp GGGCAGGCAACGACATTAATGAGCCCAATCTGGCCAAGAGGTTGGAGGCTTGAGCTGCTCCACTTGCTCTaGCTTCCTCCCTCTGCCGGA +
Preference number: 2 (lower is better)
Translates to: GQATTLMSPIWPRGWRLELLHLL*LPPSAG
Trigger: TCCGGCAGAGGGAGGAAGGCAGAGCAAGTGGAGCAG...CTCAAGCCTCCAACCTCTTGGCCAGATTGGGCTCATTAATGTCGTTGCCTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR GCA 90 bp CTGGAAGCTGGTGGGCACCGCTTCTCCTGCTCACAGCTTCAACAAGGCTTCTACAAGCCCTGCTCCACTTaGTCTGCCTTCCTCCCTCTG +
Preference number: 2 (lower is better)
Translates to: LEAGGHRFSCSQLQQGFYKPCST*SAFLPL
Trigger: CAGAGGGAGGAAGGCAGAGCAAGTGGAGCAGGGCTT...GTAGAAGCCTTGTTGAAGCTGTGAGCAGGAGAAGCGGTGCCCACCAGCTTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR GCA 90 bp CTGGAAGCTGGTGGGCACCGCTTCTCCTGCTCACAGCTTCAACAAGGCTTCTACCTGGCAGCAGGCTGGTaGTTCTGGCCAGAAACTGCT +
Preference number: 2 (lower is better)
Translates to: LEAGGHRFSCSQLQQGFYLAAGW*FWPETA
Trigger: AGCAGTTTCTGGCCAGAAGCACCAGCCTGCTGCCAG...GTAGAAGCCTTGTTGAAGCTGTGAGCAGGAGAAGCGGTGCCCACCAGCTTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR GCA 90 bp AAGCTTTTCACGACAAACAGCACAGACCCAGGCGAGAGCTATCTACGTACACTGCCTCCTATGAGGGGCTaGCCCGCTGGCAGCAGGCTG +
Preference number: 2 (lower is better)
Translates to: KLFTTNSTDPGESYLRTLPPMRG*PAGSRL
Trigger: CAGCCTGCTGCCAGCGGGGCAGCCCCTCATAGGAGG...CAGTGTACGTAGATAGCTCTCGCCTGGGTCTGTGCTGTTTGTCGTGAAAAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR CCA 90 bp CATTGGGTGTGTGCACGGAGGACATGTGGCCAGGATAAGAATTCCTTGCAGCCCAGACCTGGAAGCTGGTaGGCACCGCTTCTCCTGCTC +
Preference number: 2 (lower is better)
Translates to: HWVCARRTCGQDKNSLQPRPGSW*APLLLL
Trigger: GAGCAGGAGAAGCGGTGCCCACCAGCTTCCAGGTCT...GGGCTGCAAGGAATTCTTATCCTGGCCACATGTCCTCCGTGCACACACCCAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR GCA 90 bp CTGGAAGCTGGTGGGCACCGCTTCTCCTGCTCACAGCTTCAACAAGGCTTCTACCTGCCTTCCTCCCTCTaGCGGATAGACACCAGGTTT +
Preference number: 2 (lower is better)
Translates to: LEAGGHRFSCSQLQQGFYLPSSL*RIDTRF
Trigger: AAACCTGGTGTCTATCCGGCAGAGGGAGGAAGGCAG...GTAGAAGCCTTGTTGAAGCTGTGAGCAGGAGAAGCGGTGCCCACCAGCTTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR GCA 90 bp AGCCTGGCCAGCCCATTAAGCTTTTCACGACAAACAGCACAGACCCAGGCGAGACTGGCAGCAGGCTGGTaGTTCTGGCCAGAAACTGCT +
Preference number: 2 (lower is better)
Translates to: SLASPLSFSRQTAQTQARLAAGW*FWPETA
Trigger: AGCAGTTTCTGGCCAGAAGCACCAGCCTGCTGCCAG...TCTCGCCTGGGTCTGTGCTGTTTGTCGTGAAAAGCTTAATGGGCTGGCCAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR GCA 90 bp AGCCTGGCCAGCCCATTAAGCTTTTCACGACAAACAGCACAGACCCAGGCGAGAGGGCACCGCTTCTCCTaGTCACAGCTTCAACAAGGC +
Preference number: 2 (lower is better)
Translates to: SLASPLSFSRQTAQTQARGHRFS*SQLQQG
Trigger: GCCTTGTTGAAGCTGTGAGCAGGAGAAGCGGTGCCC...TCTCGCCTGGGTCTGTGCTGTTTGTCGTGAAAAGCTTAATGGGCTGGCCAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR GCA 90 bp AGAGCTCACAGGCAGACCACCATGGGGAGCTGCCTGTCATTCATGCAGATGGGCGCTATCTACGTACACTaGACAGAGCCACGGCACGTA +
Preference number: 2 (lower is better)
Translates to: RAHRQTTMGSCLSFMQMGAIYVH*TEPRHV
Trigger: TACGTGCCGTGGCTCTGTGCAGTGTACGTAGATAGC...GCCCATCTGCATGAATGACAGGCAGCTCCCCATGGTGGTCTGCCTGTGAGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR CCA 90 bp CAACAAGGCTTCTACGCCTTGGGGCTCCCTCCTGGGCCTCCTATGAGGGGCTGCGATAGACACCAGGTTTaGAAGAGCAGAGGAGTTGAA +
Preference number: 2 (lower is better)
Translates to: QQGFYALGLPPGPPMRGCDRHQV*KSRGVE
Trigger: TTCAACTCCTCTGCTCTTCCAAACCTGGTGTCTATC...GCAGCCCCTCATAGGAGGCCCAGGAGGGAGCCCCAAGGCGTAGAAGCCTTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR CCA 90 bp TTTCACGACAAACAGCACAGACCCAGGCGAGAGCTATCTACGTACACTGCACAGAAGGCTTCTACGCCTTaGGGCTCCCTCCTGGGCCTC +
Preference number: 2 (lower is better)
Translates to: FHDKQHRPRRELSTYTAQKASTP*GSLLGL
Trigger: GAGGCCCAGGAGGGAGCCCCAAGGCGTAGAAGCCTT...CTGTGCAGTGTACGTAGATAGCTCTCGCCTGGGTCTGTGCTGTTTGTCGTGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR CCA 90 bp TGGGTGTGTGCACGGAGGACATGTGGCCAGGATAAGAATTCCTTGCAGCCCTTAAGACCTGGAAGCTGGTaGGCACCGCTTCTCCTGCTC +
Preference number: 2 (lower is better)
Translates to: WVCARRTCGQDKNSLQPLRPGSW*APLLLL
Trigger: GAGCAGGAGAAGCGGTGCCCACCAGCTTCCAGGTCT...TAAGGGCTGCAAGGAATTCTTATCCTGGCCACATGTCCTCCGTGCACACACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR CCA 90 bp TTTCACGACAAACAGCACAGACCCAGGCGAGAGCTATCTACGTACACTGCACAGGGGAGACCTGGAAGCTaGTGGGCACCGCTTCTCCTG +
Preference number: 2 (lower is better)
Translates to: FHDKQHRPRRELSTYTAQGRPGS*WAPLLL
Trigger: CAGGAGAAGCGGTGCCCACCAGCTTCCAGGTCTCCC...CTGTGCAGTGTACGTAGATAGCTCTCGCCTGGGTCTGTGCTGTTTGTCGTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR CCA 90 bp CACCATGGGGAGCTGCCTGTCATTCATGCAGATGGGCAGGCAACGACATTAATGACGGCACGTAGGGTGTaGGGCATAGAGCAGGCAGGT +
Preference number: 2 (lower is better)
Translates to: HHGELPVIHADGQATTLMTARRV*GIEQAG
Trigger: ACCTGCCTGCTCTATGCCCCACACCCTACGTGCCGT...CATTAATGTCGTTGCCTGCCCATCTGCATGAATGACAGGCAGCTCCCCATGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR CCA 90 bp TGGGTGTGTGCACGGAGGACATGTGGCCAGGATAAGAATTCCTTGCAGCCCTTAACGGCACGTAGGGTGTaGGGCATAGAGCAGGCAGGT +
Preference number: 2 (lower is better)
Translates to: WVCARRTCGQDKNSLQPLTARRV*GIEQAG
Trigger: ACCTGCCTGCTCTATGCCCCACACCCTACGTGCCGT...TAAGGGCTGCAAGGAATTCTTATCCTGGCCACATGTCCTCCGTGCACACACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR CCA 90 bp GGGGTGGAGGGCGAGGAAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAATCTGGCCAAGAGGTTaGAGGCTTGAGAGGTGGGAG +
Preference number: 2 (lower is better)
Translates to: GVEGEETGEGQEWCAGLSIWPRG*RLERWE
Trigger: CTCCCACCTCTCAAGCCTCCAACCTCTTGGCCAGAT...TGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTTCCTCGCCCTCCACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR GCA 90 bp CTCACAGGCAGACCACCATGGGGAGCTGCCTGTCATTCATGCAGATGGGCAGGCTGCTCCATATGGCTTTaGTTGGAGAAGGTGACACAG +
Preference number: 2 (lower is better)
Translates to: LTGRPPWGAACHSCRWAGCSIWL*LEKVTQ
Trigger: CTGTGTCACCTTCTCCAAGCAAAGCCATATGGAGCA...GCCTGCCCATCTGCATGAATGACAGGCAGCTCCCCATGGTGGTCTGCCTGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR CCA 90 bp TTTCACGACAAACAGCACAGACCCAGGCGAGAGCTATCTACGTACACTGCACAGAGACCTGGAAGCTGGTaGGCACCGCTTCTCCTGCTC +
Preference number: 2 (lower is better)
Translates to: FHDKQHRPRRELSTYTAQRPGSW*APLLLL
Trigger: GAGCAGGAGAAGCGGTGCCCACCAGCTTCCAGGTCT...CTGTGCAGTGTACGTAGATAGCTCTCGCCTGGGTCTGTGCTGTTTGTCGTGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR GCA 90 bp GCAGGCTGGTGCTTCTGGCCAGAAACTGCTCCTGCTAAGCCCTGCTCCACTTGCATGTCTCCTGAAAATTaGAGTGACATAGGCACAGGC +
Preference number: 2 (lower is better)
Translates to: AGWCFWPETAPAKPCSTCMSPEN*SDIGTG
Trigger: GCCTGTGCCTATGTCACTGCAATTTTCAGGAGACAT...GCAAGTGGAGCAGGGCTTAGCAGGAGCAGTTTCTGGCCAGAAGCACCAGCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR GCA 90 bp GGGGTGGAGGGCGAGGAAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAGGGAGTCTGGGTAGATaGTCCATATGGCTTTGCTTG +
Preference number: 2 (lower is better)
Translates to: GVEGEETGEGQEWCAGLSGSLGR*SIWLCL
Trigger: CAAGCAAAGCCATATGGAGCATCTACCCAGACTCCC...TGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTTCCTCGCCCTCCACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR CCA 90 bp GCGAGGAAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAAGGAGAGAAAACGGCACGTAGGGTGTaGGGCATAGAGCAGGCAGGT +
Preference number: 2 (lower is better)
Translates to: ARKLGKDKNGVLDFQGEKTARRV*GIEQAG
Trigger: ACCTGCCTGCTCTATGCCCCACACCCTACGTGCCGT...TTTCTCTCCTTGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTTCCTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR CCA 90 bp CATTGGGTGTGTGCACGGAGGACATGTGGCCAGGATAAGAATTCCTTGCAGCCCTGCAGAGTGGGAGTCTaGGTAGATGCTCCATATGGC +
Preference number: 2 (lower is better)
Translates to: HWVCARRTCGQDKNSLQPCRVGV*VDAPYG
Trigger: GCCATATGGAGCATCTACCCAGACTCCCACTCTGCA...GGGCTGCAAGGAATTCTTATCCTGGCCACATGTCCTCCGTGCACACACCCAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR GCA 90 bp CAGGGAGACCTGGAAGCTGGTGGGCACCGCTTCTCCTGCTCACAGCTTCAACAAATGTCTCCTGAAAATTaGAGTGACATAGGCACAGGC +
Preference number: 2 (lower is better)
Translates to: QGDLEAGGHRFSCSQLQQMSPEN*SDIGTG
Trigger: GCCTGTGCCTATGTCACTGCAATTTTCAGGAGACAT...TTGTTGAAGCTGTGAGCAGGAGAAGCGGTGCCCACCAGCTTCCAGGTCTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR GCA 90 bp ACCGCTTCTCCTGCTCACAGCTTCAACAAGGCTTCTACGCCTTGGGGCTCCCTCATGTCTCCTGAAAATTaGAGTGACATAGGCACAGGC +
Preference number: 2 (lower is better)
Translates to: TASPAHSFNKASTPWGSLMSPEN*SDIGTG
Trigger: GCCTGTGCCTATGTCACTGCAATTTTCAGGAGACAT...GAGGGAGCCCCAAGGCGTAGAAGCCTTGTTGAAGCTGTGAGCAGGAGAAGCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR GCA 90 bp GCGAGGAAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAAGGAGAGAAACTGGCAGCAGGCTGGTaGTTCTGGCCAGAAACTGCT +
Preference number: 2 (lower is better)
Translates to: ARKLGKDKNGVLDFQGEKLAAGW*FWPETA
Trigger: AGCAGTTTCTGGCCAGAAGCACCAGCCTGCTGCCAG...TTTCTCTCCTTGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTTCCTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR GCA 90 bp ACATGTGGCCAGGATAAGAATTCCTTGCAGCCCTTACTCATGAACTTCTTTCTACCTCCTATGAGGGGCTaGCCCGCTGGCAGCAGGCTG +
Preference number: 2 (lower is better)
Translates to: TCGQDKNSLQPLLMNFFLPPMRG*PAGSRL
Trigger: CAGCCTGCTGCCAGCGGGGCAGCCCCTCATAGGAGG...TAGAAAGAAGTTCATGAGTAAGGGCTGCAAGGAATTCTTATCCTGGCCACATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR GCA 90 bp CTGGCTGGGTCTCAGCGCACTTGGGAGCTAATCCTGGAGTTAAGGATTAGAACTGCTGCCTGTCATTCATaGAGATGGGCAGGCAACGAC +
Preference number: 2 (lower is better)
Translates to: LAGSQRTWELILELRIRTAACHS*RWAGND
Trigger: GTCGTTGCCTGCCCATCTGCATGAATGACAGGCAGC...AGTTCTAATCCTTAACTCCAGGATTAGCTCCCAAGTGCGCTGAGACCCAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR GCA 90 bp AGGAAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAAGGAGAGAAAAGGGAAGGGCCAGAAGTGTaGTGGCTGGGTCTCAGCGCA +
Preference number: 2 (lower is better)
Translates to: RKLGKDKNGVLDFQGEKREGPEV*WLGLSA
Trigger: TGCGCTGAGACCCAGCCAGCACACTTCTGGCCCTTC...CCTTTTCTCTCCTTGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR CCA 90 bp AAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAAGGAGAGAAAAGGGAACAGGTCAGGGAGACCTaGAAGCTGGTGGGCACCGCT +
Preference number: 2 (lower is better)
Translates to: KLGKDKNGVLDFQGEKREQVRET*KLVGTA
Trigger: AGCGGTGCCCACCAGCTTCCAGGTCTCCCTGACCTG...TTCCCTTTTCTCTCCTTGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR CCA 90 bp GAAGAGCTCACAGGCAGACCACCATGGGGAGCTGCCTGTCATTCATGCAGATGGTTAATGAGCCCAATCTaGCCAAGAGGTTGGAGGCTT +
Preference number: 2 (lower is better)
Translates to: EELTGRPPWGAACHSCRWLMSPI*PRGWRL
Trigger: AAGCCTCCAACCTCTTGGCCAGATTGGGCTCATTAA...CCATCTGCATGAATGACAGGCAGCTCCCCATGGTGGTCTGCCTGTGAGCTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR CAA 90 bp AACTTCTTTCTATTCCACTTTGGAGGGTGTGGCACTGCTTTTAGATaGAGGCAGGGAGAAGGGCCAGAAGTGTGCTGGCTGGGTCTCAGC +
Preference number: 2 (lower is better)
Translates to: NFFLFHFGGCGTAFR*RQGEGPEVCWLGLS
Trigger: GCTGAGACCCAGCCAGCACACTTCTGGCCCTTCTCCCTGCCTCAATCTAAAAGCAGTGCCACACCCTCCAAAGTGGAATAGAAAGAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR GCA 90 bp AAGCTTTTCACGACAAACAGCACAGACCCAGGCGAGAGCTATCTACGTACACTGCTGCCTTCCTCCCTCTaGCGGATAGACACCAGGTTT +
Preference number: 2 (lower is better)
Translates to: KLFTTNSTDPGESYLRTLLPSSL*RIDTRF
Trigger: AAACCTGGTGTCTATCCGGCAGAGGGAGGAAGGCAG...CAGTGTACGTAGATAGCTCTCGCCTGGGTCTGTGCTGTTTGTCGTGAAAAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR CCA 90 bp AAGCTGGTGGGCACCGCTTCTCCTGCTCACAGCTTCAACAAGGCTTCTACGCCTGATAGACACCAGGTTTaGAAGAGCAGAGGAGTTGAA +
Preference number: 2 (lower is better)
Translates to: KLVGTASPAHSFNKASTPDRHQV*KSRGVE
Trigger: TTCAACTCCTCTGCTCTTCCAAACCTGGTGTCTATC...AGGCGTAGAAGCCTTGTTGAAGCTGTGAGCAGGAGAAGCGGTGCCCACCAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR TCA 90 bp GGCTGGTGCTTCTGGCCAGAAACTGCTCCTGCTAAGCCCTGCTCCACTTGCTCTGAAGAGCAGAGGAGTTaGATATGTCTCCTGAAAATT +
Preference number: 2 (lower is better)
Translates to: GWCFWPETAPAKPCSTCSEEQRS*ICLLKI
Trigger: AATTTTCAGGAGACATATTCAACTCCTCTGCTCTTC...AGAGCAAGTGGAGCAGGGCTTAGCAGGAGCAGTTTCTGGCCAGAAGCACCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR GCA 90 bp AAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAAGGAGAGAAAAGGGAAGGGCACCGCTTCTCCTaGTCACAGCTTCAACAAGGC +
Preference number: 2 (lower is better)
Translates to: KLGKDKNGVLDFQGEKREGHRFS*SQLQQG
Trigger: GCCTTGTTGAAGCTGTGAGCAGGAGAAGCGGTGCCC...TTCCCTTTTCTCTCCTTGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR GCA 90 bp AGGAAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAAGGAGAGAAAAGGACTCCATTGGGTGTGTaGACGGAGGACATGTGGCCA +
Preference number: 2 (lower is better)
Translates to: RKLGKDKNGVLDFQGEKRTPLGV*TEDMWP
Trigger: TGGCCACATGTCCTCCGTGCACACACCCAATGGAGT...CCTTTTCTCTCCTTGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR CCA 90 bp AGCCTGGCCAGCCCATTAAGCTTTTCACGACAAACAGCACAGACCCAGGCGAGAGATAGACACCAGGTTTaGAAGAGCAGAGGAGTTGAA +
Preference number: 2 (lower is better)
Translates to: SLASPLSFSRQTAQTQARDRHQV*KSRGVE
Trigger: TTCAACTCCTCTGCTCTTCCAAACCTGGTGTCTATC...TCTCGCCTGGGTCTGTGCTGTTTGTCGTGAAAAGCTTAATGGGCTGGCCAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR CCA 90 bp ACATGTGGCCAGGATAAGAATTCCTTGCAGCCCTTACTCATGAACTTCTTTCTAAAGGCTTCTACGCCTTaGGGCTCCCTCCTGGGCCTC +
Preference number: 2 (lower is better)
Translates to: TCGQDKNSLQPLLMNFFLKASTP*GSLLGL
Trigger: GAGGCCCAGGAGGGAGCCCCAAGGCGTAGAAGCCTT...TAGAAAGAAGTTCATGAGTAAGGGCTGCAAGGAATTCTTATCCTGGCCACATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR CCA 90 bp GCGAGGAAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAAGGAGAGAAAGGGTCTCAGCGCACTTaGGAGCTAATCCTGGAGTTA +
Preference number: 2 (lower is better)
Translates to: ARKLGKDKNGVLDFQGEKGSQRT*ELILEL
Trigger: TAACTCCAGGATTAGCTCCCAAGTGCGCTGAGACCC...TTTCTCTCCTTGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTTCCTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR CCA 90 bp TTCCTTGCAGCCCTTACTCATGAACTTCTTTCTATTCCACTTTGGAGGGTGTGGCAGAAGTGTGCTGGCTaGGTCTCAGCGCACTTGGGA +
Preference number: 2 (lower is better)
Translates to: FLAALTHELLSIPLWRVWQKCAG*VSAHLG
Trigger: TCCCAAGTGCGCTGAGACCCAGCCAGCACACTTCTG...CCACACCCTCCAAAGTGGAATAGAAAGAAGTTCATGAGTAAGGGCTGCAAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR CCA 90 bp AGGAAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAAGGAGAGAAAAGGTGCAGAGTGGGAGTCTaGGTAGATGCTCCATATGGC +
Preference number: 2 (lower is better)
Translates to: RKLGKDKNGVLDFQGEKRCRVGV*VDAPYG
Trigger: GCCATATGGAGCATCTACCCAGACTCCCACTCTGCA...CCTTTTCTCTCCTTGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR CCA 90 bp CTGGCTGGGTCTCAGCGCACTTGGGAGCTAATCCTGGAGTTAAGGATTAGAACTTTAATGAGCCCAATCTaGCCAAGAGGTTGGAGGCTT +
Preference number: 2 (lower is better)
Translates to: LAGSQRTWELILELRIRTLMSPI*PRGWRL
Trigger: AAGCCTCCAACCTCTTGGCCAGATTGGGCTCATTAA...AGTTCTAATCCTTAACTCCAGGATTAGCTCCCAAGTGCGCTGAGACCCAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR CCA 90 bp TTCCTTGCAGCCCTTACTCATGAACTTCTTTCTATTCCACTTTGGAGGGTGTGGACAGGCAGACCACCATaGGGAGCTGCCTGTCATTCA +
Preference number: 2 (lower is better)
Translates to: FLAALTHELLSIPLWRVWTGRPP*GAACHS
Trigger: TGAATGACAGGCAGCTCCCCATGGTGGTCTGCCTGT...CCACACCCTCCAAAGTGGAATAGAAAGAAGTTCATGAGTAAGGGCTGCAAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR CAA 90 bp CATTGGGTGTGTGCACGGAGGACATGTGGCCAGGATAAGAATTCCTaGCAGCCCTTACTCATGAACTTCTTTCTATTCCACTTTGGAGGG +
Preference number: 2 (lower is better)
Translates to: HWVCARRTCGQDKNS*QPLLMNFFLFHFGG
Trigger: CCCTCCAAAGTGGAATAGAAAGAAGTTCATGAGTAAGGGCTGCAAGGAATTCTTATCCTGGCCACATGTCCTCCGTGCACACACCCAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR GCA 90 bp ACATGTGGCCAGGATAAGAATTCCTTGCAGCCCTTACTCATGAACTTCTTTCTAGCTCCTGCTAAGCCCTaGTCCACTTGCTCTGCCTTC +
Preference number: 2 (lower is better)
Translates to: TCGQDKNSLQPLLMNFFLAPAKP*STCSAF
Trigger: GAAGGCAGAGCAAGTGGAGCAGGGCTTAGCAGGAGC...TAGAAAGAAGTTCATGAGTAAGGGCTGCAAGGAATTCTTATCCTGGCCACATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR GCA 90 bp ACATGTGGCCAGGATAAGAATTCCTTGCAGCCCTTACTCATGAACTTCTTTCTAGCTATCTACGTACACTaGACAGAGCCACGGCACGTA +
Preference number: 2 (lower is better)
Translates to: TCGQDKNSLQPLLMNFFLAIYVH*TEPRHV
Trigger: TACGTGCCGTGGCTCTGTGCAGTGTACGTAGATAGC...TAGAAAGAAGTTCATGAGTAAGGGCTGCAAGGAATTCTTATCCTGGCCACATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR CCA 90 bp AATTCCTTGCAGCCCTTACTCATGAACTTCTTTCTATTCCACTTTGGAGGGTGTTGCAGAGTGGGAGTCTaGGTAGATGCTCCATATGGC +
Preference number: 2 (lower is better)
Translates to: NSLQPLLMNFFLFHFGGCCRVGV*VDAPYG
Trigger: GCCATATGGAGCATCTACCCAGACTCCCACTCTGCA...ACACCCTCCAAAGTGGAATAGAAAGAAGTTCATGAGTAAGGGCTGCAAGGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR CCA 90 bp GCGAGGAAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAAGGAGAGAAATGTCATTCATGCAGATaGGCAGGCAACGACATTAAT +
Preference number: 2 (lower is better)
Translates to: ARKLGKDKNGVLDFQGEKCHSCR*AGNDIN
Trigger: ATTAATGTCGTTGCCTGCCCATCTGCATGAATGACA...TTTCTCTCCTTGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTTCCTCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR CCA 90 bp AATTCCTTGCAGCCCTTACTCATGAACTTCTTTCTATTCCACTTTGGAGGGTGTGGGTCTCAGCGCACTTaGGAGCTAATCCTGGAGTTA +
Preference number: 2 (lower is better)
Translates to: NSLQPLLMNFFLFHFGGCGSQRT*ELILEL
Trigger: TAACTCCAGGATTAGCTCCCAAGTGCGCTGAGACCC...ACACCCTCCAAAGTGGAATAGAAAGAAGTTCATGAGTAAGGGCTGCAAGGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR TCA 90 bp TGTCATTCATGCAGATGGGCAGGCAACGACATTAATGAGCCCAATCTGGCCAAGGAAGAGCAGAGGAGTTaGATATGTCTCCTGAAAATT +
Preference number: 2 (lower is better)
Translates to: CHSCRWAGNDINEPNLAKEEQRS*ICLLKI
Trigger: AATTTTCAGGAGACATATTCAACTCCTCTGCTCTTC...CTTGGCCAGATTGGGCTCATTAATGTCGTTGCCTGCCCATCTGCATGAATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR TCA 90 bp AAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAAGGAGAGAAAAGGGAAGAAGAGCAGAGGAGTTaGATATGTCTCCTGAAAATT +
Preference number: 2 (lower is better)
Translates to: KLGKDKNGVLDFQGEKREEEQRS*ICLLKI
Trigger: AATTTTCAGGAGACATATTCAACTCCTCTGCTCTTC...TTCCCTTTTCTCTCCTTGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR GCA 72 bp GCCTTGGGGCTCCCTCCTGGGCCTCCTATGAGGGGCTaGCCCGCTGGCAGCAGGCTGGTGCTTCTGGCCAGA +
Preference number: 3 (lower is better)
Translates to: ALGLPPGPPMRG*PAGSRLVLLAR
Trigger: TCTGGCCAGAAGCACCAGCCTGCTGCCAGCGGGGCAGCCCCTCATAGGAGGCCCAGGAGGGAGCCCCAAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR GCA 72 bp CAGGGAGACCTGGAAGCTGGTGGGCACCGCTTCTCCTaGTCACAGCTTCAACAAGGCTTCTACGCCTTGGGG +
Preference number: 3 (lower is better)
Translates to: QGDLEAGGHRFS*SQLQQGFYALG
Trigger: CCCCAAGGCGTAGAAGCCTTGTTGAAGCTGTGAGCAGGAGAAGCGGTGCCCACCAGCTTCCAGGTCTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR CCA 72 bp GGGCATAGAGCAGGCAGGTCAGGGAGACCTGGAAGCTaGTGGGCACCGCTTCTCCTGCTCACAGCTTCAACA +
Preference number: 3 (lower is better)
Translates to: GHRAGRSGRPGS*WAPLLLLTAST
Trigger: TGTTGAAGCTGTGAGCAGGAGAAGCGGTGCCCACCAGCTTCCAGGTCTCCCTGACCTGCCTGCTCTATGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR CCA 72 bp CTACGTACACTGCACAGAGCCACGGCACGTAGGGTGTaGGGCATAGAGCAGGCAGGTCAGGGAGACCTGGAA +
Preference number: 3 (lower is better)
Translates to: LRTLHRATARRV*GIEQAGQGDLE
Trigger: TTCCAGGTCTCCCTGACCTGCCTGCTCTATGCCCCACACCCTACGTGCCGTGGCTCTGTGCAGTGTACGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR GCA 72 bp TGGTGCTTCTGGCCAGAAACTGCTCCTGCTAAGCCCTaGTCCACTTGCTCTGCCTTCCTCCCTCTGCCGGAT +
Preference number: 3 (lower is better)
Translates to: WCFWPETAPAKP*STCSAFLPLPD
Trigger: ATCCGGCAGAGGGAGGAAGGCAGAGCAAGTGGAGCAGGGCTTAGCAGGAGCAGTTTCTGGCCAGAAGCACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR CCA 72 bp CATAGAGCAGGCAGGTCAGGGAGACCTGGAAGCTGGTaGGCACCGCTTCTCCTGCTCACAGCTTCAACAAGG +
Preference number: 3 (lower is better)
Translates to: HRAGRSGRPGSW*APLLLLTASTR
Trigger: CCTTGTTGAAGCTGTGAGCAGGAGAAGCGGTGCCCACCAGCTTCCAGGTCTCCCTGACCTGCCTGCTCTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR CAA 90 bp CACCATGGGGAGCTGCCTGTCATTCATGCAGATGGGCAGGCAACGACATTAATGCAAGGCTTCTACGCCTaGGGGCTCCCTCCTGGGCCT +
Preference number: 3 (lower is better)
Translates to: HHGELPVIHADGQATTLMQGFYA*GLPPGP
Trigger: AGGCCCAGGAGGGAGCCCCAAGGCGTAGAAGCCTTG...CATTAATGTCGTTGCCTGCCCATCTGCATGAATGACAGGCAGCTCCCCATGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR CAA 90 bp GAAGAGCTCACAGGCAGACCACCATGGGGAGCTGCCTGTCATTCATGCAGATGGCAAGAGGTTGGAGGCTaGAGAGGTGGGAGTGAGTGT +
Preference number: 3 (lower is better)
Translates to: EELTGRPPWGAACHSCRWQEVGG*RGGSEC
Trigger: ACACTCACTCCCACCTCTCAAGCCTCCAACCTCTTG...CCATCTGCATGAATGACAGGCAGCTCCCCATGGTGGTCTGCCTGTGAGCTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR CCA 72 bp TGTGTGCAGAGTGGGAGTCTGGGTAGATGCTCCATATaGCTTTGCTTGGAGAAGGTGACACAGCCTGGCCAG +
Preference number: 3 (lower is better)
Translates to: CVQSGSLGRCSI*LCLEKVTQPGQ
Trigger: CTGGCCAGGCTGTGTCACCTTCTCCAAGCAAAGCCATATGGAGCATCTACCCAGACTCCCACTCTGCACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR CCA 72 bp AGACCACCATGGGGAGCTGCCTGTCATTCATGCAGATaGGCAGGCAACGACATTAATGAGCCCAATCTGGCC +
Preference number: 3 (lower is better)
Translates to: RPPWGAACHSCR*AGNDINEPNLA
Trigger: GGCCAGATTGGGCTCATTAATGTCGTTGCCTGCCCATCTGCATGAATGACAGGCAGCTCCCCATGGTGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR CCA 72 bp GGATTAGAACTTGAAGAGCTCACAGGCAGACCACCATaGGGAGCTGCCTGTCATTCATGCAGATGGGCAGGC +
Preference number: 3 (lower is better)
Translates to: GLELEELTGRPP*GAACHSCRWAG
Trigger: GCCTGCCCATCTGCATGAATGACAGGCAGCTCCCCATGGTGGTCTGCCTGTGAGCTCTTCAAGTTCTAATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR GCA 72 bp GGAGGGCGAGGAAACTGGGGAAGGACAAGAATGGTGTaGTGGACTTTCAAGGAGAGAAAAGGGAACAGAGGC +
Preference number: 3 (lower is better)
Translates to: GGRGNWGRTRMV*WTFKERKGNRG
Trigger: GCCTCTGTTCCCTTTTCTCTCCTTGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTTCCTCGCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR CAA 90 bp ACATGTGGCCAGGATAAGAATTCCTTGCAGCCCTTACTCATGAACTTCTTTCTACAAGGCTTCTACGCCTaGGGGCTCCCTCCTGGGCCT +
Preference number: 3 (lower is better)
Translates to: TCGQDKNSLQPLLMNFFLQGFYA*GLPPGP
Trigger: AGGCCCAGGAGGGAGCCCCAAGGCGTAGAAGCCTTG...TAGAAAGAAGTTCATGAGTAAGGGCTGCAAGGAATTCTTATCCTGGCCACATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR CAA 90 bp CACCATGGGGAGCTGCCTGTCATTCATGCAGATGGGCAGGCAACGACATTAATGTCCATATGGCTTTGCTaGGAGAAGGTGACACAGCCT +
Preference number: 3 (lower is better)
Translates to: HHGELPVIHADGQATTLMSIWLC*EKVTQP
Trigger: AGGCTGTGTCACCTTCTCCAAGCAAAGCCATATGGA...CATTAATGTCGTTGCCTGCCCATCTGCATGAATGACAGGCAGCTCCCCATGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR TCA 72 bp ACTTGGGAGCTAATCCTGGAGTTAAGGATTAGAACTTaGAGAGCTCACAGGCAGACCACCATGGGGAGCTGC +
Preference number: 3 (lower is better)
Translates to: TWELILELRIRT*RAHRQTTMGSC
Trigger: GCAGCTCCCCATGGTGGTCTGCCTGTGAGCTCTTCAAGTTCTAATCCTTAACTCCAGGATTAGCTCCCAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR CAA 90 bp GCGAGGAAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAAGGAGAGAAATCTTTCTATTCCACTTaGGAGGGTGTGGCACTGCTT +
Preference number: 3 (lower is better)
Translates to: ARKLGKDKNGVLDFQGEKSFYST*EGVALL
Trigger: AAGCAGTGCCACACCCTCCAAAGTGGAATAGAAAGA...TTTCTCTCCTTGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTTCCTCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR CAA 90 bp AGGAAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAAGGAGAGAAAAGGTCTTTCTATTCCACTTaGGAGGGTGTGGCACTGCTT +
Preference number: 3 (lower is better)
Translates to: RKLGKDKNGVLDFQGEKRSFYST*EGVALL
Trigger: AAGCAGTGCCACACCCTCCAAAGTGGAATAGAAAGA...CCTTTTCTCTCCTTGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR-3UTR CAA 90 bp ACATGTGGCCAGGATAAGAATTCCTTGCAGCCCTTACTCATGAACTTCTTTCTATCCATATGGCTTTGCTaGGAGAAGGTGACACAGCCT +
Preference number: 3 (lower is better)
Translates to: TCGQDKNSLQPLLMNFFLSIWLC*EKVTQP
Trigger: AGGCTGTGTCACCTTCTCCAAGCAAAGCCATATGGA...TAGAAAGAAGTTCATGAGTAAGGGCTGCAAGGAATTCTTATCCTGGCCACATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp CAACAAGGCTTCTACGCCTTGGGGCTCCCTCCTGGGCCTCCTATGAGGGGCTGCCCTGTTCTCCACCTCTaGGCGGACGCCCGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: QQGFYALGLPPGPPMRGCPVLHL*ADARAV
Trigger: CACAGCCCGGGCGTCCGCCCAGAGGTGGAGAACAGG...GCAGCCCCTCATAGGAGGCCCAGGAGGGAGCCCCAAGGCGTAGAAGCCTTGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp AGAGCTCACAGGCAGACCACCATGGGGAGCTGCCTGTCATTCATGCAGATGGGCTGCCACCAGGGGCAGTaGGCCGGCGGCCATGCTGGC +
Preference number: 4 (lower is better)
Translates to: RAHRQTTMGSCLSFMQMGCHQGQ*AGGHAG
Trigger: GCCAGCATGGCCGCCGGCCCACTGCCCCTGGTGGCA...GCCCATCTGCATGAATGACAGGCAGCTCCCCATGGTGGTCTGCCTGTGAGCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp CCTCCTATGAGGGGCTGCCCCGCTGGCAGCAGGCTGGTGCTTCTGGCCAGAAACCTGCTCCACTTGCTCTaGCTTCCTCCCTCTGCCGGA +
Preference number: 4 (lower is better)
Translates to: PPMRGCPAGSRLVLLARNLLHLL*LPPSAG
Trigger: TCCGGCAGAGGGAGGAAGGCAGAGCAAGTGGAGCAG...GTTTCTGGCCAGAAGCACCAGCCTGCTGCCAGCGGGGCAGCCCCTCATAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp CAACAAGGCTTCTACGCCTTGGGGCTCCCTCCTGGGCCTCCTATGAGGGGCTGCCTGGGCCAGCACTTCTaGAGCCACGTAGCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: QQGFYALGLPPGPPMRGCLGQHF*SHVAWG
Trigger: ACCCCAGGCTACGTGGCTCCAGAAGTGCTGGCCCAG...GCAGCCCCTCATAGGAGGCCCAGGAGGGAGCCCCAAGGCGTAGAAGCCTTGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp GGGGTGGAGGGCGAGGAAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCATGCCACCAGGGGCAGTaGGCCGGCGGCCATGCTGGC +
Preference number: 4 (lower is better)
Translates to: GVEGEETGEGQEWCAGLSCHQGQ*AGGHAG
Trigger: GCCAGCATGGCCGCCGGCCCACTGCCCCTGGTGGCA...TGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTTCCTCGCCCTCCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp CCTCCTATGAGGGGCTGCCCCGCTGGCAGCAGGCTGGTGCTTCTGGCCAGAAACAGACCTGGAAGCTGGTaGGCACCGCTTCTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: PPMRGCPAGSRLVLLARNRPGSW*APLLLL
Trigger: GAGCAGGAGAAGCGGTGCCCACCAGCTTCCAGGTCT...GTTTCTGGCCAGAAGCACCAGCCTGCTGCCAGCGGGGCAGCCCCTCATAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp CAACAAGGCTTCTACGCCTTGGGGCTCCCTCCTGGGCCTCCTATGAGGGGCTGCGGGAGACCTGGAAGCTaGTGGGCACCGCTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: QQGFYALGLPPGPPMRGCGRPGS*WAPLLL
Trigger: CAGGAGAAGCGGTGCCCACCAGCTTCCAGGTCTCCC...GCAGCCCCTCATAGGAGGCCCAGGAGGGAGCCCCAAGGCGTAGAAGCCTTGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp CAGGGAGACCTGGAAGCTGGTGGGCACCGCTTCTCCTGCTCACAGCTTCAACAAGACTCCAGTCTGCCCTaGCCGGCAGTGGGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: QGDLEAGGHRFSCSQLQQDSSLP*PAVGAA
Trigger: GGCAGCTCCCACTGCCGGGCAGGGCAGACTGGAGTC...TTGTTGAAGCTGTGAGCAGGAGAAGCGGTGCCCACCAGCTTCCAGGTCTCCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp GGCTGGTGCTTCTGGCCAGAAACTGCTCCTGCTAAGCCCTGCTCCACTTGCTCTCCTGTTCTCCACCTCTaGGCGGACGCCCGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: GWCFWPETAPAKPCSTCSPVLHL*ADARAV
Trigger: CACAGCCCGGGCGTCCGCCCAGAGGTGGAGAACAGG...AGAGCAAGTGGAGCAGGGCTTAGCAGGAGCAGTTTCTGGCCAGAAGCACCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp GGGCAGGCAACGACATTAATGAGCCCAATCTGGCCAAGAGGTTGGAGGCTTGAGTGCCACCAGGGGCAGTaGGCCGGCGGCCATGCTGGC +
Preference number: 4 (lower is better)
Translates to: GQATTLMSPIWPRGWRLECHQGQ*AGGHAG
Trigger: GCCAGCATGGCCGCCGGCCCACTGCCCCTGGTGGCA...CTCAAGCCTCCAACCTCTTGGCCAGATTGGGCTCATTAATGTCGTTGCCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp CTCACAGGCAGACCACCATGGGGAGCTGCCTGTCATTCATGCAGATGGGCAGGCCTTGGGGCTCCCTCCTaGGCCTCCTATGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LTGRPPWGAACHSCRWAGLGAPS*ASYEGL
Trigger: CAGCCCCTCATAGGAGGCCCAGGAGGGAGCCCCAAG...GCCTGCCCATCTGCATGAATGACAGGCAGCTCCCCATGGTGGTCTGCCTGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp GCAGGCTGGTGCTTCTGGCCAGAAACTGCTCCTGCTAAGCCCTGCTCCACTTGCCTTGGGGCTCCCTCCTaGGCCTCCTATGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: AGWCFWPETAPAKPCSTCLGAPS*ASYEGL
Trigger: CAGCCCCTCATAGGAGGCCCAGGAGGGAGCCCCAAG...GCAAGTGGAGCAGGGCTTAGCAGGAGCAGTTTCTGGCCAGAAGCACCAGCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp CAACAAGGCTTCTACGCCTTGGGGCTCCCTCCTGGGCCTCCTATGAGGGGCTGCACGGCACGTAGGGTGTaGGGCATAGAGCAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: QQGFYALGLPPGPPMRGCTARRV*GIEQAG
Trigger: ACCTGCCTGCTCTATGCCCCACACCCTACGTGCCGT...GCAGCCCCTCATAGGAGGCCCAGGAGGGAGCCCCAAGGCGTAGAAGCCTTGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR TCA 90 bp CAACAAGGCTTCTACGCCTTGGGGCTCCCTCCTGGGCCTCCTATGAGGGGCTGCGATCTGGAGGCTGACTaGTGGGTAGATGTCCCGGTG +
Preference number: 4 (lower is better)
Translates to: QQGFYALGLPPGPPMRGCDLEAD*WVDVPV
Trigger: CACCGGGACATCTACCCATCAGTCAGCCTCCAGATC...GCAGCCCCTCATAGGAGGCCCAGGAGGGAGCCCCAAGGCGTAGAAGCCTTGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp CAACAAGGCTTCTACGCCTTGGGGCTCCCTCCTGGGCCTCCTATGAGGGGCTGCAAGCCCTGCTCCACTTaGTCTGCCTTCCTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: QQGFYALGLPPGPPMRGCKPCST*SAFLPL
Trigger: CAGAGGGAGGAAGGCAGAGCAAGTGGAGCAGGGCTT...GCAGCCCCTCATAGGAGGCCCAGGAGGGAGCCCCAAGGCGTAGAAGCCTTGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp CTCACAGGCAGACCACCATGGGGAGCTGCCTGTCATTCATGCAGATGGGCAGGCGGGAGACCTGGAAGCTaGTGGGCACCGCTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: LTGRPPWGAACHSCRWAGGRPGS*WAPLLL
Trigger: CAGGAGAAGCGGTGCCCACCAGCTTCCAGGTCTCCC...GCCTGCCCATCTGCATGAATGACAGGCAGCTCCCCATGGTGGTCTGCCTGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp GCACCGCTTCTCCTGCTCACAGCTTCAACAAGGCTTCTACGCCTTGGGGCTCCCCAGGTCAGGGAGACCTaGAAGCTGGTGGGCACCGCT +
Preference number: 4 (lower is better)
Translates to: APLLLLTASTRLLRLGAPQVRET*KLVGTA
Trigger: AGCGGTGCCCACCAGCTTCCAGGTCTCCCTGACCTG...GGGAGCCCCAAGGCGTAGAAGCCTTGTTGAAGCTGTGAGCAGGAGAAGCGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR TCA 90 bp CAACAAGGCTTCTACGCCTTGGGGCTCCCTCCTGGGCCTCCTATGAGGGGCTGCGTCCCGGAAGGCAGGTaGCTTCTTGATGCACTTCAG +
Preference number: 4 (lower is better)
Translates to: QQGFYALGLPPGPPMRGCVPEGR*LLDALQ
Trigger: CTGAAGTGCATCAAGAAGTCACCTGCCTTCCGGGAC...GCAGCCCCTCATAGGAGGCCCAGGAGGGAGCCCCAAGGCGTAGAAGCCTTGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp CTCACAGGCAGACCACCATGGGGAGCTGCCTGTCATTCATGCAGATGGGCAGGCCTGCTCCACTTGCTCTaGCTTCCTCCCTCTGCCGGA +
Preference number: 4 (lower is better)
Translates to: LTGRPPWGAACHSCRWAGLLHLL*LPPSAG
Trigger: TCCGGCAGAGGGAGGAAGGCAGAGCAAGTGGAGCAG...GCCTGCCCATCTGCATGAATGACAGGCAGCTCCCCATGGTGGTCTGCCTGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp GGGCAGGCAACGACATTAATGAGCCCAATCTGGCCAAGAGGTTGGAGGCTTGAGCCTCCTATGAGGGGCTaGCCCGCTGGCAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: GQATTLMSPIWPRGWRLEPPMRG*PAGSRL
Trigger: CAGCCTGCTGCCAGCGGGGCAGCCCCTCATAGGAGG...CTCAAGCCTCCAACCTCTTGGCCAGATTGGGCTCATTAATGTCGTTGCCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp CATTGGGTGTGTGCACGGAGGACATGTGGCCAGGATAAGAATTCCTTGCAGCCCCCTCCTATGAGGGGCTaGCCCGCTGGCAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: HWVCARRTCGQDKNSLQPPPMRG*PAGSRL
Trigger: CAGCCTGCTGCCAGCGGGGCAGCCCCTCATAGGAGG...GGGCTGCAAGGAATTCTTATCCTGGCCACATGTCCTCCGTGCACACACCCAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp CCTCCTATGAGGGGCTGCCCCGCTGGCAGCAGGCTGGTGCTTCTGGCCAGAAACACCACCATGGGGAGCTaGCTGTCATTCATGCAGATG +
Preference number: 4 (lower is better)
Translates to: PPMRGCPAGSRLVLLARNTTMGS*LSFMQM
Trigger: CATCTGCATGAATGACAGGCAGCTCCCCATGGTGGT...GTTTCTGGCCAGAAGCACCAGCCTGCTGCCAGCGGGGCAGCCCCTCATAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp GGGGTGGAGGGCGAGGAAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAGGCCGGCGGCCATGCTaGCAGGGTAATTGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: GVEGEETGEGQEWCAGLSGRRPC*QGNWVR
Trigger: CCTGACCCAATTACCCTGCCAGCATGGCCGCCGGCC...TGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTTCCTCGCCCTCCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp CAGGGAGACCTGGAAGCTGGTGGGCACCGCTTCTCCTGCTCACAGCTTCAACAAAAGGCTTCTACGCCTTaGGGCTCCCTCCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: QGDLEAGGHRFSCSQLQQKASTP*GSLLGL
Trigger: GAGGCCCAGGAGGGAGCCCCAAGGCGTAGAAGCCTT...TTGTTGAAGCTGTGAGCAGGAGAAGCGGTGCCCACCAGCTTCCAGGTCTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR CAA 72 bp TTCTCCTGCTCACAGCTTCAACAAGGCTTCTACGCCTaGGGGCTCCCTCCTGGGCCTCCTATGAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: FSCSQLQQGFYA*GLPPGPPMRGC
Trigger: GCAGCCCCTCATAGGAGGCCCAGGAGGGAGCCCCAAGGCGTAGAAGCCTTGTTGAAGCTGTGAGCAGGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR TCA 90 bp ACCGCTTCTCCTGCTCACAGCTTCAACAAGGCTTCTACGCCTTGGGGCTCCCTCCCACAGCTGCTGCGTTaGAGGCTTGCCTCCACTTGC +
Preference number: 4 (lower is better)
Translates to: TASPAHSFNKASTPWGSLPQLLR*RLASTC
Trigger: GCAAGTGGAGGCAAGCCTTCAACGCAGCAGCTGTGG...GAGGGAGCCCCAAGGCGTAGAAGCCTTGTTGAAGCTGTGAGCAGGAGAAGCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp CTCACAGGCAGACCACCATGGGGAGCTGCCTGTCATTCATGCAGATGGGCAGGCTCTCATTCTCCAGGCTaGTGTCCCGGAAGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: LTGRPPWGAACHSCRWAGSHSPG*CPGRQV
Trigger: CACCTGCCTTCCGGGACAGCAGCCTGGAGAATGAGA...GCCTGCCCATCTGCATGAATGACAGGCAGCTCCCCATGGTGGTCTGCCTGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp GCAGGCTGGTGCTTCTGGCCAGAAACTGCTCCTGCTAAGCCCTGCTCCACTTGCGTGCACCACAGCTGCTaGGTTGAAGGCTTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: AGWCFWPETAPAKPCSTCVHHSC*VEGLPP
Trigger: TGGAGGCAAGCCTTCAACGCAGCAGCTGTGGTGCAC...GCAAGTGGAGCAGGGCTTAGCAGGAGCAGTTTCTGGCCAGAAGCACCAGCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp ACCGCTTCTCCTGCTCACAGCTTCAACAAGGCTTCTACGCCTTGGGGCTCCCTCCGGACGCCCGGGCTGTaGAGGTTCATGTGTAGCTTC +
Preference number: 4 (lower is better)
Translates to: TASPAHSFNKASTPWGSLRTPGL*RFMCSF
Trigger: GAAGCTACACATGAACCTGCACAGCCCGGGCGTCCG...GAGGGAGCCCCAAGGCGTAGAAGCCTTGTTGAAGCTGTGAGCAGGAGAAGCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp AAGCTGGTGGGCACCGCTTCTCCTGCTCACAGCTTCAACAAGGCTTCTACGCCTAGACAGACTCCAGTCTaGCCTGCCCGGCAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: KLVGTASPAHSFNKASTPRQTPV*PARQWE
Trigger: CTCCCACTGCCGGGCAGGGCAGACTGGAGTCTGTCT...AGGCGTAGAAGCCTTGTTGAAGCTGTGAGCAGGAGAAGCGGTGCCCACCAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp CACCATGGGGAGCTGCCTGTCATTCATGCAGATGGGCAGGCAACGACATTAATGCCTCCTATGAGGGGCTaGCCCGCTGGCAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: HHGELPVIHADGQATTLMPPMRG*PAGSRL
Trigger: CAGCCTGCTGCCAGCGGGGCAGCCCCTCATAGGAGG...CATTAATGTCGTTGCCTGCCCATCTGCATGAATGACAGGCAGCTCCCCATGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp GCAGGCTGGTGCTTCTGGCCAGAAACTGCTCCTGCTAAGCCCTGCTCCACTTGCGGGCACCGCTTCTCCTaGTCACAGCTTCAACAAGGC +
Preference number: 4 (lower is better)
Translates to: AGWCFWPETAPAKPCSTCGHRFS*SQLQQG
Trigger: GCCTTGTTGAAGCTGTGAGCAGGAGAAGCGGTGCCC...GCAAGTGGAGCAGGGCTTAGCAGGAGCAGTTTCTGGCCAGAAGCACCAGCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp ACCGCTTCTCCTGCTCACAGCTTCAACAAGGCTTCTACGCCTTGGGGCTCCCTCGAAGGGCCAGAAGTGTaGTGGCTGGGTCTCAGCGCA +
Preference number: 4 (lower is better)
Translates to: TASPAHSFNKASTPWGSLEGPEV*WLGLSA
Trigger: TGCGCTGAGACCCAGCCAGCACACTTCTGGCCCTTC...GAGGGAGCCCCAAGGCGTAGAAGCCTTGTTGAAGCTGTGAGCAGGAGAAGCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp CTCACAGGCAGACCACCATGGGGAGCTGCCTGTCATTCATGCAGATGGGCAGGCGCCGACAAGACCTGCTaGATCACCAGACTGGCATCC +
Preference number: 4 (lower is better)
Translates to: LTGRPPWGAACHSCRWAGADKTC*ITRLAS
Trigger: GGATGCCAGTCTGGTGATCCAGCAGGTCTTGTCGGC...GCCTGCCCATCTGCATGAATGACAGGCAGCTCCCCATGGTGGTCTGCCTGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp CTCACAGGCAGACCACCATGGGGAGCTGCCTGTCATTCATGCAGATGGGCAGGCAGGCTGCTGCTGATGTaGAGGGAGCCATTGACCAGG +
Preference number: 4 (lower is better)
Translates to: LTGRPPWGAACHSCRWAGRLLLM*REPLTR
Trigger: CCTGGTCAATGGCTCCCTCCACATCAGCAGCAGCCT...GCCTGCCCATCTGCATGAATGACAGGCAGCTCCCCATGGTGGTCTGCCTGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp GAAGAGCTCACAGGCAGACCACCATGGGGAGCTGCCTGTCATTCATGCAGATGGTGCCCTGCCCGGCAGTaGGAGCTGCCACTGGCTTTA +
Preference number: 4 (lower is better)
Translates to: EELTGRPPWGAACHSCRWCPARQ*ELPLAL
Trigger: TAAAGCCAGTGGCAGCTCCCACTGCCGGGCAGGGCA...CCATCTGCATGAATGACAGGCAGCTCCCCATGGTGGTCTGCCTGTGAGCTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp CTGGAAGCTGGTGGGCACCGCTTCTCCTGCTCACAGCTTCAACAAGGCTTCTACAAGGCTTCTACGCCTTaGGGCTCCCTCCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: LEAGGHRFSCSQLQQGFYKASTP*GSLLGL
Trigger: GAGGCCCAGGAGGGAGCCCCAAGGCGTAGAAGCCTT...GTAGAAGCCTTGTTGAAGCTGTGAGCAGGAGAAGCGGTGCCCACCAGCTTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp AGAGCTCACAGGCAGACCACCATGGGGAGCTGCCTGTCATTCATGCAGATGGGCGGGCCAGAAGTGTGCTaGCTGGGTCTCAGCGCACTT +
Preference number: 4 (lower is better)
Translates to: RAHRQTTMGSCLSFMQMGGPEVC*LGLSAL
Trigger: AAGTGCGCTGAGACCCAGCCAGCACACTTCTGGCCC...GCCCATCTGCATGAATGACAGGCAGCTCCCCATGGTGGTCTGCCTGTGAGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp CCTCCTATGAGGGGCTGCCCCGCTGGCAGCAGGCTGGTGCTTCTGGCCAGAAACGCAGCTCTTCTCCTTTaGCTTTCCAAAGCGTTGGGA +
Preference number: 4 (lower is better)
Translates to: PPMRGCPAGSRLVLLARNAALLL*LSKALG
Trigger: TCCCAACGCTTTGGAAAGCCAAAGGAGAAGAGCTGC...GTTTCTGGCCAGAAGCACCAGCCTGCTGCCAGCGGGGCAGCCCCTCATAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651530.1
CDS-3UTR TCA 90 bp GCACCGCTTCTCCTGCTCACAGCTTCAACAAGGCTTCTACGCCTTGGGGCTCCCCCGTCAATCCAGGGATaGCTCAAGGCCTTCTCACAG +
Preference number: 4 (lower is better)
Translates to: APLLLLTASTRLLRLGAPPSIQG*LKAFSQ
Trigger: CTGTGAGAAGGCCTTGAGTCATCCCTGGATTGACGG...GGGAGCCCCAAGGCGTAGAAGCCTTGTTGAAGCTGTGAGCAGGAGAAGCGGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR TCA 90 bp GGCTGGTGCTTCTGGCCAGAAACTGCTCCTGCTAAGCCCTGCTCCACTTGCTCTGATCTGGAGGCTGACTaGTGGGTAGATGTCCCGGTG +
Preference number: 4 (lower is better)
Translates to: GWCFWPETAPAKPCSTCSDLEAD*WVDVPV
Trigger: CACCGGGACATCTACCCATCAGTCAGCCTCCAGATC...AGAGCAAGTGGAGCAGGGCTTAGCAGGAGCAGTTTCTGGCCAGAAGCACCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR TCA 90 bp CTCACAGGCAGACCACCATGGGGAGCTGCCTGTCATTCATGCAGATGGGCAGGCGAGGTTTCTGAGGCTTaGGTTTCAGGCGGCCTGTTC +
Preference number: 4 (lower is better)
Translates to: LTGRPPWGAACHSCRWAGEVSEA*VSGGLF
Trigger: GAACAGGCCGCCTGAAACTCAAGCCTCAGAAACCTC...GCCTGCCCATCTGCATGAATGACAGGCAGCTCCCCATGGTGGTCTGCCTGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR TCA 90 bp GCACCGCTTCTCCTGCTCACAGCTTCAACAAGGCTTCTACGCCTTGGGGCTCCCGAGGTTTCTGAGGCTTaGGTTTCAGGCGGCCTGTTC +
Preference number: 4 (lower is better)
Translates to: APLLLLTASTRLLRLGAPEVSEA*VSGGLF
Trigger: GAACAGGCCGCCTGAAACTCAAGCCTCAGAAACCTC...GGGAGCCCCAAGGCGTAGAAGCCTTGTTGAAGCTGTGAGCAGGAGAAGCGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp GCAGCAGGCTGGTGCTTCTGGCCAGAAACTGCTCCTGCTAAGCCCTGCTCCACTACTGCCGACAAGACCTaGTGGATCACCAGACTGGCA +
Preference number: 4 (lower is better)
Translates to: AAGWCFWPETAPAKPCSTTADKT*WITRLA
Trigger: TGCCAGTCTGGTGATCCAGCAGGTCTTGTCGGCAGT...AGTGGAGCAGGGCTTAGCAGGAGCAGTTTCTGGCCAGAAGCACCAGCCTGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp CTCACAGGCAGACCACCATGGGGAGCTGCCTGTCATTCATGCAGATGGGCAGGCACTGCCGACAAGACCTaGTGGATCACCAGACTGGCA +
Preference number: 4 (lower is better)
Translates to: LTGRPPWGAACHSCRWAGTADKT*WITRLA
Trigger: TGCCAGTCTGGTGATCCAGCAGGTCTTGTCGGCAGT...GCCTGCCCATCTGCATGAATGACAGGCAGCTCCCCATGGTGGTCTGCCTGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp CAGGGAGACCTGGAAGCTGGTGGGCACCGCTTCTCCTGCTCACAGCTTCAACAAGTGGTGCACCACAGCTaGTGCGTTGAAGGCTTGCCT +
Preference number: 4 (lower is better)
Translates to: QGDLEAGGHRFSCSQLQQVVHHS*CVEGLP
Trigger: AGGCAAGCCTTCAACGCAGCAGCTGTGGTGCACCAC...TTGTTGAAGCTGTGAGCAGGAGAAGCGGTGCCCACCAGCTTCCAGGTCTCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp CACCATGGGGAGCTGCCTGTCATTCATGCAGATGGGCAGGCAACGACATTAATGGTGGGCCGGCGGCCATaGTGGCAGGGTAATTGGGTC +
Preference number: 4 (lower is better)
Translates to: HHGELPVIHADGQATTLMVGRRP*WQGNWV
Trigger: GACCCAATTACCCTGCCAGCATGGCCGCCGGCCCAC...CATTAATGTCGTTGCCTGCCCATCTGCATGAATGACAGGCAGCTCCCCATGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp AGAGCTCACAGGCAGACCACCATGGGGAGCTGCCTGTCATTCATGCAGATGGGCGCTCCTGCTAAGCCCTaGTCCACTTGCTCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: RAHRQTTMGSCLSFMQMGAPAKP*STCSAF
Trigger: GAAGGCAGAGCAAGTGGAGCAGGGCTTAGCAGGAGC...GCCCATCTGCATGAATGACAGGCAGCTCCCCATGGTGGTCTGCCTGTGAGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp ACCGCTTCTCCTGCTCACAGCTTCAACAAGGCTTCTACGCCTTGGGGCTCCCTCGGGCACCGCTTCTCCTaGTCACAGCTTCAACAAGGC +
Preference number: 4 (lower is better)
Translates to: TASPAHSFNKASTPWGSLGHRFS*SQLQQG
Trigger: GCCTTGTTGAAGCTGTGAGCAGGAGAAGCGGTGCCC...GAGGGAGCCCCAAGGCGTAGAAGCCTTGTTGAAGCTGTGAGCAGGAGAAGCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp CTCACAGGCAGACCACCATGGGGAGCTGCCTGTCATTCATGCAGATGGGCAGGCACTCCATTGGGTGTGTaGACGGAGGACATGTGGCCA +
Preference number: 4 (lower is better)
Translates to: LTGRPPWGAACHSCRWAGTPLGV*TEDMWP
Trigger: TGGCCACATGTCCTCCGTGCACACACCCAATGGAGT...GCCTGCCCATCTGCATGAATGACAGGCAGCTCCCCATGGTGGTCTGCCTGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp CAGGGAGACCTGGAAGCTGGTGGGCACCGCTTCTCCTGCTCACAGCTTCAACAAGCCGACAAGACCTGCTaGATCACCAGACTGGCATCC +
Preference number: 4 (lower is better)
Translates to: QGDLEAGGHRFSCSQLQQADKTC*ITRLAS
Trigger: GGATGCCAGTCTGGTGATCCAGCAGGTCTTGTCGGC...TTGTTGAAGCTGTGAGCAGGAGAAGCGGTGCCCACCAGCTTCCAGGTCTCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp TTTCACGACAAACAGCACAGACCCAGGCGAGAGCTATCTACGTACACTGCACAGCCTGTTCTCCACCTCTaGGCGGACGCCCGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: FHDKQHRPRRELSTYTAQPVLHL*ADARAV
Trigger: CACAGCCCGGGCGTCCGCCCAGAGGTGGAGAACAGG...CTGTGCAGTGTACGTAGATAGCTCTCGCCTGGGTCTGTGCTGTTTGTCGTGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp CATTGGGTGTGTGCACGGAGGACATGTGGCCAGGATAAGAATTCCTTGCAGCCCAAGGCTTCTACGCCTTaGGGCTCCCTCCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: HWVCARRTCGQDKNSLQPKASTP*GSLLGL
Trigger: GAGGCCCAGGAGGGAGCCCCAAGGCGTAGAAGCCTT...GGGCTGCAAGGAATTCTTATCCTGGCCACATGTCCTCCGTGCACACACCCAATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp CAACAAGGCTTCTACGCCTTGGGGCTCCCTCCTGGGCCTCCTATGAGGGGCTGCCTGGTCTTGAACTCCTaGGATCAAGCAGCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: QQGFYALGLPPGPPMRGCLVLNS*DQAALL
Trigger: GAGAAGAGCTGCTTGATCCCAGGAGTTCAAGACCAG...GCAGCCCCTCATAGGAGGCCCAGGAGGGAGCCCCAAGGCGTAGAAGCCTTGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651530.1
CDS-3UTR TCA 90 bp CAGGGAGACCTGGAAGCTGGTGGGCACCGCTTCTCCTGCTCACAGCTTCAACAACCGTCAATCCAGGGATaGCTCAAGGCCTTCTCACAG +
Preference number: 4 (lower is better)
Translates to: QGDLEAGGHRFSCSQLQQPSIQG*LKAFSQ
Trigger: CTGTGAGAAGGCCTTGAGTCATCCCTGGATTGACGG...TTGTTGAAGCTGTGAGCAGGAGAAGCGGTGCCCACCAGCTTCCAGGTCTCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR TCA 90 bp AGCCTGGCCAGCCCATTAAGCTTTTCACGACAAACAGCACAGACCCAGGCGAGACCACAGCTGCTGCGTTaGAGGCTTGCCTCCACTTGC +
Preference number: 4 (lower is better)
Translates to: SLASPLSFSRQTAQTQARPQLLR*RLASTC
Trigger: GCAAGTGGAGGCAAGCCTTCAACGCAGCAGCTGTGG...TCTCGCCTGGGTCTGTGCTGTTTGTCGTGAAAAGCTTAATGGGCTGGCCAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp GAAGAGCTCACAGGCAGACCACCATGGGGAGCTGCCTGTCATTCATGCAGATGGTCTCATTCTCCAGGCTaGTGTCCCGGAAGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: EELTGRPPWGAACHSCRWSHSPG*CPGRQV
Trigger: CACCTGCCTTCCGGGACAGCAGCCTGGAGAATGAGA...CCATCTGCATGAATGACAGGCAGCTCCCCATGGTGGTCTGCCTGTGAGCTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp AAGCTGGTGGGCACCGCTTCTCCTGCTCACAGCTTCAACAAGGCTTCTACGCCTGTGCACCACAGCTGCTaGGTTGAAGGCTTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: KLVGTASPAHSFNKASTPVHHSC*VEGLPP
Trigger: TGGAGGCAAGCCTTCAACGCAGCAGCTGTGGTGCAC...AGGCGTAGAAGCCTTGTTGAAGCTGTGAGCAGGAGAAGCGGTGCCCACCAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp CTGGAAGCTGGTGGGCACCGCTTCTCCTGCTCACAGCTTCAACAAGGCTTCTACGTGGTGCACCACAGCTaGTGCGTTGAAGGCTTGCCT +
Preference number: 4 (lower is better)
Translates to: LEAGGHRFSCSQLQQGFYVVHHS*CVEGLP
Trigger: AGGCAAGCCTTCAACGCAGCAGCTGTGGTGCACCAC...GTAGAAGCCTTGTTGAAGCTGTGAGCAGGAGAAGCGGTGCCCACCAGCTTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp GGGCAGGCAACGACATTAATGAGCCCAATCTGGCCAAGAGGTTGGAGGCTTGAGCGGACGCCCGGGCTGTaGAGGTTCATGTGTAGCTTC +
Preference number: 4 (lower is better)
Translates to: GQATTLMSPIWPRGWRLERTPGL*RFMCSF
Trigger: GAAGCTACACATGAACCTGCACAGCCCGGGCGTCCG...CTCAAGCCTCCAACCTCTTGGCCAGATTGGGCTCATTAATGTCGTTGCCTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp AGCCTGGCCAGCCCATTAAGCTTTTCACGACAAACAGCACAGACCCAGGCGAGACGGACGCCCGGGCTGTaGAGGTTCATGTGTAGCTTC +
Preference number: 4 (lower is better)
Translates to: SLASPLSFSRQTAQTQARRTPGL*RFMCSF
Trigger: GAAGCTACACATGAACCTGCACAGCCCGGGCGTCCG...TCTCGCCTGGGTCTGTGCTGTTTGTCGTGAAAAGCTTAATGGGCTGGCCAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp GCAGGCTGGTGCTTCTGGCCAGAAACTGCTCCTGCTAAGCCCTGCTCCACTTGCGCTATCTACGTACACTaGACAGAGCCACGGCACGTA +
Preference number: 4 (lower is better)
Translates to: AGWCFWPETAPAKPCSTCAIYVH*TEPRHV
Trigger: TACGTGCCGTGGCTCTGTGCAGTGTACGTAGATAGC...GCAAGTGGAGCAGGGCTTAGCAGGAGCAGTTTCTGGCCAGAAGCACCAGCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp GGGCAGGCAACGACATTAATGAGCCCAATCTGGCCAAGAGGTTGGAGGCTTGAGGAAGGGCCAGAAGTGTaGTGGCTGGGTCTCAGCGCA +
Preference number: 4 (lower is better)
Translates to: GQATTLMSPIWPRGWRLEEGPEV*WLGLSA
Trigger: TGCGCTGAGACCCAGCCAGCACACTTCTGGCCCTTC...CTCAAGCCTCCAACCTCTTGGCCAGATTGGGCTCATTAATGTCGTTGCCTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp ACCGCTTCTCCTGCTCACAGCTTCAACAAGGCTTCTACGCCTTGGGGCTCCCTCACTCCATTGGGTGTGTaGACGGAGGACATGTGGCCA +
Preference number: 4 (lower is better)
Translates to: TASPAHSFNKASTPWGSLTPLGV*TEDMWP
Trigger: TGGCCACATGTCCTCCGTGCACACACCCAATGGAGT...GAGGGAGCCCCAAGGCGTAGAAGCCTTGTTGAAGCTGTGAGCAGGAGAAGCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp CTGGCTGGGTCTCAGCGCACTTGGGAGCTAATCCTGGAGTTAAGGATTAGAACTCTTGGGGCTCCCTCCTaGGCCTCCTATGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LAGSQRTWELILELRIRTLGAPS*ASYEGL
Trigger: CAGCCCCTCATAGGAGGCCCAGGAGGGAGCCCCAAG...AGTTCTAATCCTTAACTCCAGGATTAGCTCCCAAGTGCGCTGAGACCCAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp GCAGGCTGGTGCTTCTGGCCAGAAACTGCTCCTGCTAAGCCCTGCTCCACTTGCTGCAGAGTGGGAGTCTaGGTAGATGCTCCATATGGC +
Preference number: 4 (lower is better)
Translates to: AGWCFWPETAPAKPCSTCCRVGV*VDAPYG
Trigger: GCCATATGGAGCATCTACCCAGACTCCCACTCTGCA...GCAAGTGGAGCAGGGCTTAGCAGGAGCAGTTTCTGGCCAGAAGCACCAGCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp ACCGCTTCTCCTGCTCACAGCTTCAACAAGGCTTCTACGCCTTGGGGCTCCCTCATCTGGCCAAGAGGTTaGAGGCTTGAGAGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: TASPAHSFNKASTPWGSLIWPRG*RLERWE
Trigger: CTCCCACCTCTCAAGCCTCCAACCTCTTGGCCAGAT...GAGGGAGCCCCAAGGCGTAGAAGCCTTGTTGAAGCTGTGAGCAGGAGAAGCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp AGAGCTCACAGGCAGACCACCATGGGGAGCTGCCTGTCATTCATGCAGATGGGCATCTGGCCAAGAGGTTaGAGGCTTGAGAGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: RAHRQTTMGSCLSFMQMGIWPRG*RLERWE
Trigger: CTCCCACCTCTCAAGCCTCCAACCTCTTGGCCAGAT...GCCCATCTGCATGAATGACAGGCAGCTCCCCATGGTGGTCTGCCTGTGAGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp AAGCTGGTGGGCACCGCTTCTCCTGCTCACAGCTTCAACAAGGCTTCTACGCCTCAGAAGTGTGCTGGCTaGGTCTCAGCGCACTTGGGA +
Preference number: 4 (lower is better)
Translates to: KLVGTASPAHSFNKASTPQKCAG*VSAHLG
Trigger: TCCCAAGTGCGCTGAGACCCAGCCAGCACACTTCTG...AGGCGTAGAAGCCTTGTTGAAGCTGTGAGCAGGAGAAGCGGTGCCCACCAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp GGGCAGGCAACGACATTAATGAGCCCAATCTGGCCAAGAGGTTGGAGGCTTGAGGGGCCAGAAGTGTGCTaGCTGGGTCTCAGCGCACTT +
Preference number: 4 (lower is better)
Translates to: GQATTLMSPIWPRGWRLEGPEVC*LGLSAL
Trigger: AAGTGCGCTGAGACCCAGCCAGCACACTTCTGGCCC...CTCAAGCCTCCAACCTCTTGGCCAGATTGGGCTCATTAATGTCGTTGCCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp AGCCTGGCCAGCCCATTAAGCTTTTCACGACAAACAGCACAGACCCAGGCGAGAGGGCCAGAAGTGTGCTaGCTGGGTCTCAGCGCACTT +
Preference number: 4 (lower is better)
Translates to: SLASPLSFSRQTAQTQARGPEVC*LGLSAL
Trigger: AAGTGCGCTGAGACCCAGCCAGCACACTTCTGGCCC...TCTCGCCTGGGTCTGTGCTGTTTGTCGTGAAAAGCTTAATGGGCTGGCCAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp CCTCCTATGAGGGGCTGCCCCGCTGGCAGCAGGCTGGTGCTTCTGGCCAGAAACCTTTCTATTCCACTTTaGAGGGTGTGGCACTGCTTT +
Preference number: 4 (lower is better)
Translates to: PPMRGCPAGSRLVLLARNLSIPL*RVWHCF
Trigger: AAAGCAGTGCCACACCCTCCAAAGTGGAATAGAAAG...GTTTCTGGCCAGAAGCACCAGCCTGCTGCCAGCGGGGCAGCCCCTCATAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp GGGCAGGCAACGACATTAATGAGCCCAATCTGGCCAAGAGGTTGGAGGCTTGAGATGAAGCTGGAGGGGTaGAGGGCGAGGAAACTGGGG +
Preference number: 4 (lower is better)
Translates to: GQATTLMSPIWPRGWRLEMKLEG*RARKLG
Trigger: CCCCAGTTTCCTCGCCCTCCACCCCTCCAGCTTCAT...CTCAAGCCTCCAACCTCTTGGCCAGATTGGGCTCATTAATGTCGTTGCCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR TCA 90 bp GGGCAGGCAACGACATTAATGAGCCCAATCTGGCCAAGAGGTTGGAGGCTTGAGGGGAAGAATCCTGCTTaGGCTCCCACTCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: GQATTLMSPIWPRGWRLEGKNPA*APTPAP
Trigger: AGGAGCTGGAGTGGGAGCTCAAGCAGGATTCTTCCC...CTCAAGCCTCCAACCTCTTGGCCAGATTGGGCTCATTAATGTCGTTGCCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR TCA 90 bp GCAGCAGGCTGGTGCTTCTGGCCAGAAACTGCTCCTGCTAAGCCCTGCTCCACTGACTGGAACTGGGGCTaGAATAAATGCCCAAGTTGC +
Preference number: 4 (lower is better)
Translates to: AAGWCFWPETAPAKPCSTDWNWG*NKCPSC
Trigger: GCAACTTGGGCATTTATTTCAGCCCCAGTTCCAGTC...AGTGGAGCAGGGCTTAGCAGGAGCAGTTTCTGGCCAGAAGCACCAGCCTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000009105.5
CDS-3UTR TCA 90 bp CTGGAAGCTGGTGGGCACCGCTTCTCCTGCTCACAGCTTCAACAAGGCTTCTACGTCCCGGAAGGCAGGTaGCTTCTTGATGCACTTCAG +
Preference number: 4 (lower is better)
Translates to: LEAGGHRFSCSQLQQGFYVPEGR*LLDALQ
Trigger: CTGAAGTGCATCAAGAAGTCACCTGCCTTCCGGGAC...GTAGAAGCCTTGTTGAAGCTGTGAGCAGGAGAAGCGGTGCCCACCAGCTTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR TCA 90 bp CTGGAAGCTGGTGGGCACCGCTTCTCCTGCTCACAGCTTCAACAAGGCTTCTACTCTGGATCTGGAGGCTaGCTGATGGGTAGATGTCCC +
Preference number: 4 (lower is better)
Translates to: LEAGGHRFSCSQLQQGFYSGSGG*LMGRCP
Trigger: GGGACATCTACCCATCAGTCAGCCTCCAGATCCAGA...GTAGAAGCCTTGTTGAAGCTGTGAGCAGGAGAAGCGGTGCCCACCAGCTTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR TCA 90 bp CTGGAAGCTGGTGGGCACCGCTTCTCCTGCTCACAGCTTCAACAAGGCTTCTACGAGGTTTCTGAGGCTTaGGTTTCAGGCGGCCTGTTC +
Preference number: 4 (lower is better)
Translates to: LEAGGHRFSCSQLQQGFYEVSEA*VSGGLF
Trigger: GAACAGGCCGCCTGAAACTCAAGCCTCAGAAACCTC...GTAGAAGCCTTGTTGAAGCTGTGAGCAGGAGAAGCGGTGCCCACCAGCTTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR TCA 90 bp GGGGTGGAGGGCGAGGAAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAGGGTCTAGAGGTTTCTaGGGCTTGAGTTTCAGGCGG +
Preference number: 4 (lower is better)
Translates to: GVEGEETGEGQEWCAGLSGSRGF*GLSFRR
Trigger: CCGCCTGAAACTCAAGCCTCAGAAACCTCTAGACCC...TGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTTCCTCGCCCTCCACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp TGTCATTCATGCAGATGGGCAGGCAACGACATTAATGAGCCCAATCTGGCCAAGGTGGGCCGGCGGCCATaGTGGCAGGGTAATTGGGTC +
Preference number: 4 (lower is better)
Translates to: CHSCRWAGNDINEPNLAKVGRRP*WQGNWV
Trigger: GACCCAATTACCCTGCCAGCATGGCCGCCGGCCCAC...CTTGGCCAGATTGGGCTCATTAATGTCGTTGCCTGCCCATCTGCATGAATGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp AAGCTTTTCACGACAAACAGCACAGACCCAGGCGAGAGCTATCTACGTACACTGGTGGGCCGGCGGCCATaGTGGCAGGGTAATTGGGTC +
Preference number: 4 (lower is better)
Translates to: KLFTTNSTDPGESYLRTLVGRRP*WQGNWV
Trigger: GACCCAATTACCCTGCCAGCATGGCCGCCGGCCCAC...CAGTGTACGTAGATAGCTCTCGCCTGGGTCTGTGCTGTTTGTCGTGAAAAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp CAGAGTGGGAGTCTGGGTAGATGCTCCATATGGCTTTGCTTGGAGAAGGTGACAAGACAGACTCCAGTCTaGCCTGCCCGGCAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: QSGSLGRCSIWLCLEKVTRQTPV*PARQWE
Trigger: CTCCCACTGCCGGGCAGGGCAGACTGGAGTCTGTCT...TGTCACCTTCTCCAAGCAAAGCCATATGGAGCATCTACCCAGACTCCCACTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp GGCTGGTGCTTCTGGCCAGAAACTGCTCCTGCTAAGCCCTGCTCCACTTGCTCTACCACCATGGGGAGCTaGCTGTCATTCATGCAGATG +
Preference number: 4 (lower is better)
Translates to: GWCFWPETAPAKPCSTCSTTMGS*LSFMQM
Trigger: CATCTGCATGAATGACAGGCAGCTCCCCATGGTGGT...AGAGCAAGTGGAGCAGGGCTTAGCAGGAGCAGTTTCTGGCCAGAAGCACCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp TGGGTGTGTGCACGGAGGACATGTGGCCAGGATAAGAATTCCTTGCAGCCCTTAGGGAGTGCTACACTGTaGTCCAGGACAGGTGCCTCG +
Preference number: 4 (lower is better)
Translates to: WVCARRTCGQDKNSLQPLGSATL*SRTGAS
Trigger: CGAGGCACCTGTCCTGGACCACAGTGTAGCACTCCC...TAAGGGCTGCAAGGAATTCTTATCCTGGCCACATGTCCTCCGTGCACACACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp TGTCATTCATGCAGATGGGCAGGCAACGACATTAATGAGCCCAATCTGGCCAAGGGCCGGCGGCCATGCTaGCAGGGTAATTGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: CHSCRWAGNDINEPNLAKGRRPC*QGNWVR
Trigger: CCTGACCCAATTACCCTGCCAGCATGGCCGCCGGCC...CTTGGCCAGATTGGGCTCATTAATGTCGTTGCCTGCCCATCTGCATGAATGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp CCTGTCATTCATGCAGATGGGCAGGCAACGACATTAATGAGCCCAATCTGGCCATGCCCTGCCCGGCAGTaGGAGCTGCCACTGGCTTTA +
Preference number: 4 (lower is better)
Translates to: PVIHADGQATTLMSPIWPCPARQ*ELPLAL
Trigger: TAAAGCCAGTGGCAGCTCCCACTGCCGGGCAGGGCA...TGGCCAGATTGGGCTCATTAATGTCGTTGCCTGCCCATCTGCATGAATGACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp CACCATGGGGAGCTGCCTGTCATTCATGCAGATGGGCAGGCAACGACATTAATGAGACCTGGAAGCTGGTaGGCACCGCTTCTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: HHGELPVIHADGQATTLMRPGSW*APLLLL
Trigger: GAGCAGGAGAAGCGGTGCCCACCAGCTTCCAGGTCT...CATTAATGTCGTTGCCTGCCCATCTGCATGAATGACAGGCAGCTCCCCATGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp GGCTGGTGCTTCTGGCCAGAAACTGCTCCTGCTAAGCCCTGCTCCACTTGCTCTGGGTCTCAGCGCACTTaGGAGCTAATCCTGGAGTTA +
Preference number: 4 (lower is better)
Translates to: GWCFWPETAPAKPCSTCSGSQRT*ELILEL
Trigger: TAACTCCAGGATTAGCTCCCAAGTGCGCTGAGACCC...AGAGCAAGTGGAGCAGGGCTTAGCAGGAGCAGTTTCTGGCCAGAAGCACCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp CAACAAGGCTTCTACGCCTTGGGGCTCCCTCCTGGGCCTCCTATGAGGGGCTGCCTTTCTATTCCACTTTaGAGGGTGTGGCACTGCTTT +
Preference number: 4 (lower is better)
Translates to: QQGFYALGLPPGPPMRGCLSIPL*RVWHCF
Trigger: AAAGCAGTGCCACACCCTCCAAAGTGGAATAGAAAG...GCAGCCCCTCATAGGAGGCCCAGGAGGGAGCCCCAAGGCGTAGAAGCCTTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp CAGGGAGACCTGGAAGCTGGTGGGCACCGCTTCTCCTGCTCACAGCTTCAACAACAATGTGACTCAGGATaGCACACTGGAGTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: QGDLEAGGHRFSCSQLQQQCDSG*HTGVAA
Trigger: AGCTGCCACTCCAGTGTGCCATCCTGAGTCACATTG...TTGTTGAAGCTGTGAGCAGGAGAAGCGGTGCCCACCAGCTTCCAGGTCTCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651530.1
CDS-3UTR TCA 90 bp GGCTGGTGCTTCTGGCCAGAAACTGCTCCTGCTAAGCCCTGCTCCACTTGCTCTCTTCTGAGGATGCCTTaGTGCCAAAAGAGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: GWCFWPETAPAKPCSTCSLLRMP*CQKSQG
Trigger: TCCCTGACTCTTTTGGCATCAAGGCATCCTCAGAAG...AGAGCAAGTGGAGCAGGGCTTAGCAGGAGCAGTTTCTGGCCAGAAGCACCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000009105.5
CDS-3UTR TCA 90 bp CTCACAGGCAGACCACCATGGGGAGCTGCCTGTCATTCATGCAGATGGGCAGGCAGGCAGGTGACTTCTTaGTGCACTTCAGAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: LTGRPPWGAACHSCRWAGRQVTS*CTSEQR
Trigger: TCTTTGCTCTGAAGTGCATCAAGAAGTCACCTGCCT...GCCTGCCCATCTGCATGAATGACAGGCAGCTCCCCATGGTGGTCTGCCTGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR TCA 90 bp GAAGAGCTCACAGGCAGACCACCATGGGGAGCTGCCTGTCATTCATGCAGATGGCAGAAACAAGCTGCATaGCCAGGTAGTAGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: EELTGRPPWGAACHSCRWQKQAA*PGSSGW
Trigger: CCACCCACTACTACCTGGTCATGCAGCTTGTTTCTG...CCATCTGCATGAATGACAGGCAGCTCCCCATGGTGGTCTGCCTGTGAGCTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR TCA 90 bp CAGGGAGACCTGGAAGCTGGTGGGCACCGCTTCTCCTGCTCACAGCTTCAACAACACCAGGAAAACTTCTaGGAAAGCTCCTCCAGTTGC +
Preference number: 4 (lower is better)
Translates to: QGDLEAGGHRFSCSQLQQHQENF*ESSSSC
Trigger: GCAACTGGAGGAGCTTTCTCAGAAGTTTTCCTGGTG...TTGTTGAAGCTGTGAGCAGGAGAAGCGGTGCCCACCAGCTTCCAGGTCTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651530.1
CDS-3UTR GCA 90 bp GCAGGCTGGTGCTTCTGGCCAGAAACTGCTCCTGCTAAGCCCTGCTCCACTTGCAATCCACTCACTAGGTaGTGCACGCTTCCCATTAAG +
Preference number: 4 (lower is better)
Translates to: AGWCFWPETAPAKPCSTCNPLTR*CTLPIK
Trigger: CTTAATGGGAAGCGTGCAGCACCTAGTGAGTGGATT...GCAAGTGGAGCAGGGCTTAGCAGGAGCAGTTTCTGGCCAGAAGCACCAGCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000009105.5
CDS-3UTR GCA 90 bp TGGGTGTGTGCACGGAGGACATGTGGCCAGGATAAGAATTCCTTGCAGCCCTTAGTGGTGCACCACAGCTaGTGCGTTGAAGGCTTGCCT +
Preference number: 4 (lower is better)
Translates to: WVCARRTCGQDKNSLQPLVVHHS*CVEGLP
Trigger: AGGCAAGCCTTCAACGCAGCAGCTGTGGTGCACCAC...TAAGGGCTGCAAGGAATTCTTATCCTGGCCACATGTCCTCCGTGCACACACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp TTCCTTGCAGCCCTTACTCATGAACTTCTTTCTATTCCACTTTGGAGGGTGTGGGACTCCAGTCTGCCCTaGCCGGCAGTGGGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: FLAALTHELLSIPLWRVWDSSLP*PAVGAA
Trigger: GGCAGCTCCCACTGCCGGGCAGGGCAGACTGGAGTC...CCACACCCTCCAAAGTGGAATAGAAAGAAGTTCATGAGTAAGGGCTGCAAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp GGGCAGGCAACGACATTAATGAGCCCAATCTGGCCAAGAGGTTGGAGGCTTGAGCTGCCTTCCTCCCTCTaGCGGATAGACACCAGGTTT +
Preference number: 4 (lower is better)
Translates to: GQATTLMSPIWPRGWRLELPSSL*RIDTRF
Trigger: AAACCTGGTGTCTATCCGGCAGAGGGAGGAAGGCAG...CTCAAGCCTCCAACCTCTTGGCCAGATTGGGCTCATTAATGTCGTTGCCTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp CCTGTCATTCATGCAGATGGGCAGGCAACGACATTAATGAGCCCAATCTGGCCACTGCTCCACTTGCTCTaGCTTCCTCCCTCTGCCGGA +
Preference number: 4 (lower is better)
Translates to: PVIHADGQATTLMSPIWPLLHLL*LPPSAG
Trigger: TCCGGCAGAGGGAGGAAGGCAGAGCAAGTGGAGCAG...TGGCCAGATTGGGCTCATTAATGTCGTTGCCTGCCCATCTGCATGAATGACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp TGGGTGTGTGCACGGAGGACATGTGGCCAGGATAAGAATTCCTTGCAGCCCTTACTGGCAGCAGGCTGGTaGTTCTGGCCAGAAACTGCT +
Preference number: 4 (lower is better)
Translates to: WVCARRTCGQDKNSLQPLLAAGW*FWPETA
Trigger: AGCAGTTTCTGGCCAGAAGCACCAGCCTGCTGCCAG...TAAGGGCTGCAAGGAATTCTTATCCTGGCCACATGTCCTCCGTGCACACACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp GCAGGCTGGTGCTTCTGGCCAGAAACTGCTCCTGCTAAGCCCTGCTCCACTTGCTGCTCCATATGGCTTTaGTTGGAGAAGGTGACACAG +
Preference number: 4 (lower is better)
Translates to: AGWCFWPETAPAKPCSTCCSIWL*LEKVTQ
Trigger: CTGTGTCACCTTCTCCAAGCAAAGCCATATGGAGCA...GCAAGTGGAGCAGGGCTTAGCAGGAGCAGTTTCTGGCCAGAAGCACCAGCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp TGGGTGTGTGCACGGAGGACATGTGGCCAGGATAAGAATTCCTTGCAGCCCTTAGCCGACAAGACCTGCTaGATCACCAGACTGGCATCC +
Preference number: 4 (lower is better)
Translates to: WVCARRTCGQDKNSLQPLADKTC*ITRLAS
Trigger: GGATGCCAGTCTGGTGATCCAGCAGGTCTTGTCGGC...TAAGGGCTGCAAGGAATTCTTATCCTGGCCACATGTCCTCCGTGCACACACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp GCGAGGAAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAAGGAGAGAAACTGGGCCAGCACTTCTaGAGCCACGTAGCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: ARKLGKDKNGVLDFQGEKLGQHF*SHVAWG
Trigger: ACCCCAGGCTACGTGGCTCCAGAAGTGCTGGCCCAG...TTTCTCTCCTTGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTTCCTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp CAGAGTGGGAGTCTGGGTAGATGCTCCATATGGCTTTGCTTGGAGAAGGTGACAGGGAGTGCTACACTGTaGTCCAGGACAGGTGCCTCG +
Preference number: 4 (lower is better)
Translates to: QSGSLGRCSIWLCLEKVTGSATL*SRTGAS
Trigger: CGAGGCACCTGTCCTGGACCACAGTGTAGCACTCCC...TGTCACCTTCTCCAAGCAAAGCCATATGGAGCATCTACCCAGACTCCCACTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp CACCATGGGGAGCTGCCTGTCATTCATGCAGATGGGCAGGCAACGACATTAATGAGGCTGCTGCTGATGTaGAGGGAGCCATTGACCAGG +
Preference number: 4 (lower is better)
Translates to: HHGELPVIHADGQATTLMRLLLM*REPLTR
Trigger: CCTGGTCAATGGCTCCCTCCACATCAGCAGCAGCCT...CATTAATGTCGTTGCCTGCCCATCTGCATGAATGACAGGCAGCTCCCCATGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp AAGCTTTTCACGACAAACAGCACAGACCCAGGCGAGAGCTATCTACGTACACTGTGCCCTGCCCGGCAGTaGGAGCTGCCACTGGCTTTA +
Preference number: 4 (lower is better)
Translates to: KLFTTNSTDPGESYLRTLCPARQ*ELPLAL
Trigger: TAAAGCCAGTGGCAGCTCCCACTGCCGGGCAGGGCA...CAGTGTACGTAGATAGCTCTCGCCTGGGTCTGTGCTGTTTGTCGTGAAAAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp AAGCTTTTCACGACAAACAGCACAGACCCAGGCGAGAGCTATCTACGTACACTGCAGGTCAGGGAGACCTaGAAGCTGGTGGGCACCGCT +
Preference number: 4 (lower is better)
Translates to: KLFTTNSTDPGESYLRTLQVRET*KLVGTA
Trigger: AGCGGTGCCCACCAGCTTCCAGGTCTCCCTGACCTG...CAGTGTACGTAGATAGCTCTCGCCTGGGTCTGTGCTGTTTGTCGTGAAAAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp GAAGAGCTCACAGGCAGACCACCATGGGGAGCTGCCTGTCATTCATGCAGATGGTGCAGAGTGGGAGTCTaGGTAGATGCTCCATATGGC +
Preference number: 4 (lower is better)
Translates to: EELTGRPPWGAACHSCRWCRVGV*VDAPYG
Trigger: GCCATATGGAGCATCTACCCAGACTCCCACTCTGCA...CCATCTGCATGAATGACAGGCAGCTCCCCATGGTGGTCTGCCTGTGAGCTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp GCAGCAGGCTGGTGCTTCTGGCCAGAAACTGCTCCTGCTAAGCCCTGCTCCACTTTAATGAGCCCAATCTaGCCAAGAGGTTGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: AAGWCFWPETAPAKPCSTLMSPI*PRGWRL
Trigger: AAGCCTCCAACCTCTTGGCCAGATTGGGCTCATTAA...AGTGGAGCAGGGCTTAGCAGGAGCAGTTTCTGGCCAGAAGCACCAGCCTGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp AAGCTGGTGGGCACCGCTTCTCCTGCTCACAGCTTCAACAAGGCTTCTACGCCTGGGTCTCAGCGCACTTaGGAGCTAATCCTGGAGTTA +
Preference number: 4 (lower is better)
Translates to: KLVGTASPAHSFNKASTPGSQRT*ELILEL
Trigger: TAACTCCAGGATTAGCTCCCAAGTGCGCTGAGACCC...AGGCGTAGAAGCCTTGTTGAAGCTGTGAGCAGGAGAAGCGGTGCCCACCAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR TCA 90 bp CTGGCTGGGTCTCAGCGCACTTGGGAGCTAATCCTGGAGTTAAGGATTAGAACTGGGAAGAATCCTGCTTaGGCTCCCACTCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LAGSQRTWELILELRIRTGKNPA*APTPAP
Trigger: AGGAGCTGGAGTGGGAGCTCAAGCAGGATTCTTCCC...AGTTCTAATCCTTAACTCCAGGATTAGCTCCCAAGTGCGCTGAGACCCAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR TCA 90 bp TTTCACGACAAACAGCACAGACCCAGGCGAGAGCTATCTACGTACACTGCACAGGATCTGGAGGCTGACTaGTGGGTAGATGTCCCGGTG +
Preference number: 4 (lower is better)
Translates to: FHDKQHRPRRELSTYTAQDLEAD*WVDVPV
Trigger: CACCGGGACATCTACCCATCAGTCAGCCTCCAGATC...CTGTGCAGTGTACGTAGATAGCTCTCGCCTGGGTCTGTGCTGTTTGTCGTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR TCA 90 bp CAACAAGGCTTCTACGCCTTGGGGCTCCCTCCTGGGCCTCCTATGAGGGGCTGCGAAGAGCAGAGGAGTTaGATATGTCTCCTGAAAATT +
Preference number: 4 (lower is better)
Translates to: QQGFYALGLPPGPPMRGCEEQRS*ICLLKI
Trigger: AATTTTCAGGAGACATATTCAACTCCTCTGCTCTTC...GCAGCCCCTCATAGGAGGCCCAGGAGGGAGCCCCAAGGCGTAGAAGCCTTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp GAAGAGCTCACAGGCAGACCACCATGGGGAGCTGCCTGTCATTCATGCAGATGGCCACTCACTAGGTGCTaGACGCTTCCCATTAAGCAA +
Preference number: 4 (lower is better)
Translates to: EELTGRPPWGAACHSCRWPLTRC*TLPIKQ
Trigger: TTGCTTAATGGGAAGCGTGCAGCACCTAGTGAGTGG...CCATCTGCATGAATGACAGGCAGCTCCCCATGGTGGTCTGCCTGTGAGCTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000009105.5
CDS-3UTR GCA 90 bp GGGCAGGCAACGACATTAATGAGCCCAATCTGGCCAAGAGGTTGGAGGCTTGAGGCTATCTACGTACACTaGACAGAGCCACGGCACGTA +
Preference number: 4 (lower is better)
Translates to: GQATTLMSPIWPRGWRLEAIYVH*TEPRHV
Trigger: TACGTGCCGTGGCTCTGTGCAGTGTACGTAGATAGC...CTCAAGCCTCCAACCTCTTGGCCAGATTGGGCTCATTAATGTCGTTGCCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp GGCTGGTGCTTCTGGCCAGAAACTGCTCCTGCTAAGCCCTGCTCCACTTGCTCTTGCTCCATATGGCTTTaGTTGGAGAAGGTGACACAG +
Preference number: 4 (lower is better)
Translates to: GWCFWPETAPAKPCSTCSCSIWL*LEKVTQ
Trigger: CTGTGTCACCTTCTCCAAGCAAAGCCATATGGAGCA...AGAGCAAGTGGAGCAGGGCTTAGCAGGAGCAGTTTCTGGCCAGAAGCACCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp CTCACAGGCAGACCACCATGGGGAGCTGCCTGTCATTCATGCAGATGGGCAGGCATTGGAAGAAAAAGATaGCACCACAGATTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: LTGRPPWGAACHSCRWAGIGRKR*HHRFRG
Trigger: GCCCCTGAATCTGTGGTGGCATCTTTTTCTTCCAAT...GCCTGCCCATCTGCATGAATGACAGGCAGCTCCCCATGGTGGTCTGCCTGTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651530.1
CDS-3UTR CCA 90 bp GCAGCAGGCTGGTGCTTCTGGCCAGAAACTGCTCCTGCTAAGCCCTGCTCCACTCGTTTCTTCATAGAATaGGGGGTATCCACAGAGCAA +
Preference number: 4 (lower is better)
Translates to: AAGWCFWPETAPAKPCSTRFFIE*GVSTEQ
Trigger: TTGCTCTGTGGATACCCCCCATTCTATGAAGAAACG...AGTGGAGCAGGGCTTAGCAGGAGCAGTTTCTGGCCAGAAGCACCAGCCTGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp AAGCTGGTGGGCACCGCTTCTCCTGCTCACAGCTTCAACAAGGCTTCTACGCCTGCCACTGGCTTTAACTaGTACCATGACCTCCGACTT +
Preference number: 4 (lower is better)
Translates to: KLVGTASPAHSFNKASTPATGFN*YHDLRL
Trigger: AAGTCGGAGGTCATGGTACCAGTTAAAGCCAGTGGC...AGGCGTAGAAGCCTTGTTGAAGCTGTGAGCAGGAGAAGCGGTGCCCACCAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp CTCACAGGCAGACCACCATGGGGAGCTGCCTGTCATTCATGCAGATGGGCAGGCGATAGACACCAGGTTTaGAAGAGCAGAGGAGTTGAA +
Preference number: 4 (lower is better)
Translates to: LTGRPPWGAACHSCRWAGDRHQV*KSRGVE
Trigger: TTCAACTCCTCTGCTCTTCCAAACCTGGTGTCTATC...GCCTGCCCATCTGCATGAATGACAGGCAGCTCCCCATGGTGGTCTGCCTGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp TGTCATTCATGCAGATGGGCAGGCAACGACATTAATGAGCCCAATCTGGCCAAGACGGCACGTAGGGTGTaGGGCATAGAGCAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: CHSCRWAGNDINEPNLAKTARRV*GIEQAG
Trigger: ACCTGCCTGCTCTATGCCCCACACCCTACGTGCCGT...CTTGGCCAGATTGGGCTCATTAATGTCGTTGCCTGCCCATCTGCATGAATGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp AGAGCTCACAGGCAGACCACCATGGGGAGCTGCCTGTCATTCATGCAGATGGGCGGTAGATGCTCCATATaGCTTTGCTTGGAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: RAHRQTTMGSCLSFMQMGGRCSI*LCLEKV
Trigger: CACCTTCTCCAAGCAAAGCCATATGGAGCATCTACC...GCCCATCTGCATGAATGACAGGCAGCTCCCCATGGTGGTCTGCCTGTGAGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp CACCATGGGGAGCTGCCTGTCATTCATGCAGATGGGCAGGCAACGACATTAATGACAGGCAGACCACCATaGGGAGCTGCCTGTCATTCA +
Preference number: 4 (lower is better)
Translates to: HHGELPVIHADGQATTLMTGRPP*GAACHS
Trigger: TGAATGACAGGCAGCTCCCCATGGTGGTCTGCCTGT...CATTAATGTCGTTGCCTGCCCATCTGCATGAATGACAGGCAGCTCCCCATGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp GGGCAGGCAACGACATTAATGAGCCCAATCTGGCCAAGAGGTTGGAGGCTTGAGGGGTCTCAGCGCACTTaGGAGCTAATCCTGGAGTTA +
Preference number: 4 (lower is better)
Translates to: GQATTLMSPIWPRGWRLEGSQRT*ELILEL
Trigger: TAACTCCAGGATTAGCTCCCAAGTGCGCTGAGACCC...CTCAAGCCTCCAACCTCTTGGCCAGATTGGGCTCATTAATGTCGTTGCCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp TGGGTGTGTGCACGGAGGACATGTGGCCAGGATAAGAATTCCTTGCAGCCCTTAGGAGGGCGAGGAAACTaGGGAAGGACAAGAATGGTG +
Preference number: 4 (lower is better)
Translates to: WVCARRTCGQDKNSLQPLGGRGN*GRTRMV
Trigger: CACCATTCTTGTCCTTCCCCAGTTTCCTCGCCCTCC...TAAGGGCTGCAAGGAATTCTTATCCTGGCCACATGTCCTCCGTGCACACACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp TGTCATTCATGCAGATGGGCAGGCAACGACATTAATGAGCCCAATCTGGCCAAGATGAAGCTGGAGGGGTaGAGGGCGAGGAAACTGGGG +
Preference number: 4 (lower is better)
Translates to: CHSCRWAGNDINEPNLAKMKLEG*RARKLG
Trigger: CCCCAGTTTCCTCGCCCTCCACCCCTCCAGCTTCAT...CTTGGCCAGATTGGGCTCATTAATGTCGTTGCCTGCCCATCTGCATGAATGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
3UTR CAA 72 bp CTATTCCACTTTGGAGGGTGTGGCACTGCTTTTAGATaGAGGCAGGGAGAAGGGCCAGAAGTGTGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LFHFGGCGTAFR*RQGEGPEVCWL
Trigger: CAGCCAGCACACTTCTGGCCCTTCTCCCTGCCTCAATCTAAAAGCAGTGCCACACCCTCCAAAGTGGAATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR TCA 90 bp CTGGCTGGGTCTCAGCGCACTTGGGAGCTAATCCTGGAGTTAAGGATTAGAACTGTCCCGGAAGGCAGGTaGCTTCTTGATGCACTTCAG +
Preference number: 4 (lower is better)
Translates to: LAGSQRTWELILELRIRTVPEGR*LLDALQ
Trigger: CTGAAGTGCATCAAGAAGTCACCTGCCTTCCGGGAC...AGTTCTAATCCTTAACTCCAGGATTAGCTCCCAAGTGCGCTGAGACCCAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR TCA 90 bp CAGAGTGGGAGTCTGGGTAGATGCTCCATATGGCTTTGCTTGGAGAAGGTGACACCGTCAATCCAGGGATaGCTCAAGGCCTTCTCACAG +
Preference number: 4 (lower is better)
Translates to: QSGSLGRCSIWLCLEKVTPSIQG*LKAFSQ
Trigger: CTGTGAGAAGGCCTTGAGTCATCCCTGGATTGACGG...TGTCACCTTCTCCAAGCAAAGCCATATGGAGCATCTACCCAGACTCCCACTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR TCA 90 bp CAGAGTGGGAGTCTGGGTAGATGCTCCATATGGCTTTGCTTGGAGAAGGTGACATCTGGATCTGGAGGCTaGCTGATGGGTAGATGTCCC +
Preference number: 4 (lower is better)
Translates to: QSGSLGRCSIWLCLEKVTSGSGG*LMGRCP
Trigger: GGGACATCTACCCATCAGTCAGCCTCCAGATCCAGA...TGTCACCTTCTCCAAGCAAAGCCATATGGAGCATCTACCCAGACTCCCACTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR TCA 90 bp AGGAAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAAGGAGAGAAAAGGCCACAGCTGCTGCGTTaGAGGCTTGCCTCCACTTGC +
Preference number: 4 (lower is better)
Translates to: RKLGKDKNGVLDFQGEKRPQLLR*RLASTC
Trigger: GCAAGTGGAGGCAAGCCTTCAACGCAGCAGCTGTGG...CCTTTTCTCTCCTTGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR TCA 90 bp CAGAGTGGGAGTCTGGGTAGATGCTCCATATGGCTTTGCTTGGAGAAGGTGACAGGGTCTAGAGGTTTCTaGGGCTTGAGTTTCAGGCGG +
Preference number: 4 (lower is better)
Translates to: QSGSLGRCSIWLCLEKVTGSRGF*GLSFRR
Trigger: CCGCCTGAAACTCAAGCCTCAGAAACCTCTAGACCC...TGTCACCTTCTCCAAGCAAAGCCATATGGAGCATCTACCCAGACTCCCACTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR TCA 90 bp CCTGTCATTCATGCAGATGGGCAGGCAACGACATTAATGAGCCCAATCTGGCCAGGGTCTAGAGGTTTCTaGGGCTTGAGTTTCAGGCGG +
Preference number: 4 (lower is better)
Translates to: PVIHADGQATTLMSPIWPGSRGF*GLSFRR
Trigger: CCGCCTGAAACTCAAGCCTCAGAAACCTCTAGACCC...TGGCCAGATTGGGCTCATTAATGTCGTTGCCTGCCCATCTGCATGAATGACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp CAGAGTGGGAGTCTGGGTAGATGCTCCATATGGCTTTGCTTGGAGAAGGTGACAACTGCCGACAAGACCTaGTGGATCACCAGACTGGCA +
Preference number: 4 (lower is better)
Translates to: QSGSLGRCSIWLCLEKVTTADKT*WITRLA
Trigger: TGCCAGTCTGGTGATCCAGCAGGTCTTGTCGGCAGT...TGTCACCTTCTCCAAGCAAAGCCATATGGAGCATCTACCCAGACTCCCACTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp GCAGGCTGGTGCTTCTGGCCAGAAACTGCTCCTGCTAAGCCCTGCTCCACTTGCAGTCTCTGTGGACGATaGCATTCTCATGTAGGTATT +
Preference number: 4 (lower is better)
Translates to: AGWCFWPETAPAKPCSTCSLCGR*HSHVGI
Trigger: AATACCTACATGAGAATGGCATCGTCCACAGAGACT...GCAAGTGGAGCAGGGCTTAGCAGGAGCAGTTTCTGGCCAGAAGCACCAGCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp AATTCCTTGCAGCCCTTACTCATGAACTTCTTTCTATTCCACTTTGGAGGGTGTGACTCCAGTCTGCCCTaGCCGGCAGTGGGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: NSLQPLLMNFFLFHFGGCDSSLP*PAVGAA
Trigger: GGCAGCTCCCACTGCCGGGCAGGGCAGACTGGAGTC...ACACCCTCCAAAGTGGAATAGAAAGAAGTTCATGAGTAAGGGCTGCAAGGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp CAGAGTGGGAGTCTGGGTAGATGCTCCATATGGCTTTGCTTGGAGAAGGTGACACTGCCTTCCTCCCTCTaGCGGATAGACACCAGGTTT +
Preference number: 4 (lower is better)
Translates to: QSGSLGRCSIWLCLEKVTLPSSL*RIDTRF
Trigger: AAACCTGGTGTCTATCCGGCAGAGGGAGGAAGGCAG...TGTCACCTTCTCCAAGCAAAGCCATATGGAGCATCTACCCAGACTCCCACTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp AAGCTTTTCACGACAAACAGCACAGACCCAGGCGAGAGCTATCTACGTACACTGAAGCCCTGCTCCACTTaGTCTGCCTTCCTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: KLFTTNSTDPGESYLRTLKPCST*SAFLPL
Trigger: CAGAGGGAGGAAGGCAGAGCAAGTGGAGCAGGGCTT...CAGTGTACGTAGATAGCTCTCGCCTGGGTCTGTGCTGTTTGTCGTGAAAAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp AAGCTTTTCACGACAAACAGCACAGACCCAGGCGAGAGCTATCTACGTACACTGCTGGCAGCAGGCTGGTaGTTCTGGCCAGAAACTGCT +
Preference number: 4 (lower is better)
Translates to: KLFTTNSTDPGESYLRTLLAAGW*FWPETA
Trigger: AGCAGTTTCTGGCCAGAAGCACCAGCCTGCTGCCAG...CAGTGTACGTAGATAGCTCTCGCCTGGGTCTGTGCTGTTTGTCGTGAAAAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp AGCCTGGCCAGCCCATTAAGCTTTTCACGACAAACAGCACAGACCCAGGCGAGAGGGAGTCTGGGTAGATaGTCCATATGGCTTTGCTTG +
Preference number: 4 (lower is better)
Translates to: SLASPLSFSRQTAQTQARGSLGR*SIWLCL
Trigger: CAAGCAAAGCCATATGGAGCATCTACCCAGACTCCC...TCTCGCCTGGGTCTGTGCTGTTTGTCGTGAAAAGCTTAATGGGCTGGCCAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp CACCATGGGGAGCTGCCTGTCATTCATGCAGATGGGCAGGCAACGACATTAATGACCACCATGGGGAGCTaGCTGTCATTCATGCAGATG +
Preference number: 4 (lower is better)
Translates to: HHGELPVIHADGQATTLMTTMGS*LSFMQM
Trigger: CATCTGCATGAATGACAGGCAGCTCCCCATGGTGGT...CATTAATGTCGTTGCCTGCCCATCTGCATGAATGACAGGCAGCTCCCCATGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp AGAGCTCACAGGCAGACCACCATGGGGAGCTGCCTGTCATTCATGCAGATGGGCAGGACAAGAATGGTGTaGTGGACTTTCAAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: RAHRQTTMGSCLSFMQMGRTRMV*WTFKER
Trigger: TCTCTCCTTGAAAGTCCAGCACACCATTCTTGTCCT...GCCCATCTGCATGAATGACAGGCAGCTCCCCATGGTGGTCTGCCTGTGAGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp AAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAAGGAGAGAAAAGGGAACTGGGCCAGCACTTCTaGAGCCACGTAGCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: KLGKDKNGVLDFQGEKRELGQHF*SHVAWG
Trigger: ACCCCAGGCTACGTGGCTCCAGAAGTGCTGGCCCAG...TTCCCTTTTCTCTCCTTGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp GCGAGGAAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAAGGAGAGAAAAGGCTGCTGCTGATGTaGAGGGAGCCATTGACCAGG +
Preference number: 4 (lower is better)
Translates to: ARKLGKDKNGVLDFQGEKRLLLM*REPLTR
Trigger: CCTGGTCAATGGCTCCCTCCACATCAGCAGCAGCCT...TTTCTCTCCTTGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTTCCTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp GGCTGGTGCTTCTGGCCAGAAACTGCTCCTGCTAAGCCCTGCTCCACTTGCTCTGATAGACACCAGGTTTaGAAGAGCAGAGGAGTTGAA +
Preference number: 4 (lower is better)
Translates to: GWCFWPETAPAKPCSTCSDRHQV*KSRGVE
Trigger: TTCAACTCCTCTGCTCTTCCAAACCTGGTGTCTATC...AGAGCAAGTGGAGCAGGGCTTAGCAGGAGCAGTTTCTGGCCAGAAGCACCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp CAGGGAGACCTGGAAGCTGGTGGGCACCGCTTCTCCTGCTCACAGCTTCAACAAGATAGACACCAGGTTTaGAAGAGCAGAGGAGTTGAA +
Preference number: 4 (lower is better)
Translates to: QGDLEAGGHRFSCSQLQQDRHQV*KSRGVE
Trigger: TTCAACTCCTCTGCTCTTCCAAACCTGGTGTCTATC...TTGTTGAAGCTGTGAGCAGGAGAAGCGGTGCCCACCAGCTTCCAGGTCTCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp AAGCTTTTCACGACAAACAGCACAGACCCAGGCGAGAGCTATCTACGTACACTGGCAGGCTGGTGCTTCTaGCCAGAAACTGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: KLFTTNSTDPGESYLRTLAGWCF*PETAPA
Trigger: AGCAGGAGCAGTTTCTGGCCAGAAGCACCAGCCTGC...CAGTGTACGTAGATAGCTCTCGCCTGGGTCTGTGCTGTTTGTCGTGAAAAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp AGGAAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAAGGAGAGAAAAGGAGACCTGGAAGCTGGTaGGCACCGCTTCTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: RKLGKDKNGVLDFQGEKRRPGSW*APLLLL
Trigger: GAGCAGGAGAAGCGGTGCCCACCAGCTTCCAGGTCT...CCTTTTCTCTCCTTGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp GAAGAGCTCACAGGCAGACCACCATGGGGAGCTGCCTGTCATTCATGCAGATGGGGTAGATGCTCCATATaGCTTTGCTTGGAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: EELTGRPPWGAACHSCRWGRCSI*LCLEKV
Trigger: CACCTTCTCCAAGCAAAGCCATATGGAGCATCTACC...CCATCTGCATGAATGACAGGCAGCTCCCCATGGTGGTCTGCCTGTGAGCTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp GCACCGCTTCTCCTGCTCACAGCTTCAACAAGGCTTCTACGCCTTGGGGCTCCCTGTCATTCATGCAGATaGGCAGGCAACGACATTAAT +
Preference number: 4 (lower is better)
Translates to: APLLLLTASTRLLRLGAPCHSCR*AGNDIN
Trigger: ATTAATGTCGTTGCCTGCCCATCTGCATGAATGACA...GGGAGCCCCAAGGCGTAGAAGCCTTGTTGAAGCTGTGAGCAGGAGAAGCGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp GCAGGCTGGTGCTTCTGGCCAGAAACTGCTCCTGCTAAGCCCTGCTCCACTTGCTGTCATTCATGCAGATaGGCAGGCAACGACATTAAT +
Preference number: 4 (lower is better)
Translates to: AGWCFWPETAPAKPCSTCCHSCR*AGNDIN
Trigger: ATTAATGTCGTTGCCTGCCCATCTGCATGAATGACA...GCAAGTGGAGCAGGGCTTAGCAGGAGCAGTTTCTGGCCAGAAGCACCAGCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp TTTCACGACAAACAGCACAGACCCAGGCGAGAGCTATCTACGTACACTGCACAGGGAGGGCGAGGAAACTaGGGAAGGACAAGAATGGTG +
Preference number: 4 (lower is better)
Translates to: FHDKQHRPRRELSTYTAQGGRGN*GRTRMV
Trigger: CACCATTCTTGTCCTTCCCCAGTTTCCTCGCCCTCC...CTGTGCAGTGTACGTAGATAGCTCTCGCCTGGGTCTGTGCTGTTTGTCGTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp TTAAGCTTTTCACGACAAACAGCACAGACCCAGGCGAGAGCTATCTACGTACACATGAAGCTGGAGGGGTaGAGGGCGAGGAAACTGGGG +
Preference number: 4 (lower is better)
Translates to: LSFSRQTAQTQARAIYVHMKLEG*RARKLG
Trigger: CCCCAGTTTCCTCGCCCTCCACCCCTCCAGCTTCAT...GTGTACGTAGATAGCTCTCGCCTGGGTCTGTGCTGTTTGTCGTGAAAAGCTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR TCA 90 bp GCGAGGAAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAAGGAGAGAAATCTGGATCTGGAGGCTaGCTGATGGGTAGATGTCCC +
Preference number: 4 (lower is better)
Translates to: ARKLGKDKNGVLDFQGEKSGSGG*LMGRCP
Trigger: GGGACATCTACCCATCAGTCAGCCTCCAGATCCAGA...TTTCTCTCCTTGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTTCCTCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR TCA 90 bp CAGAGTGGGAGTCTGGGTAGATGCTCCATATGGCTTTGCTTGGAGAAGGTGACATGCCCAAACTGGTCTTaGACTCCTGGGATCAAGCAG +
Preference number: 4 (lower is better)
Translates to: QSGSLGRCSIWLCLEKVTCPNWS*TPGIKQ
Trigger: CTGCTTGATCCCAGGAGTTCAAGACCAGTTTGGGCA...TGTCACCTTCTCCAAGCAAAGCCATATGGAGCATCTACCCAGACTCCCACTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651530.1
CDS-3UTR GCA 90 bp AGAGCTCACAGGCAGACCACCATGGGGAGCTGCCTGTCATTCATGCAGATGGGCTTCCCAGTCAGTCTTTaGTTCACCAGGAAAACTTCT +
Preference number: 4 (lower is better)
Translates to: RAHRQTTMGSCLSFMQMGFPVSL*FTRKTS
Trigger: AGAAGTTTTCCTGGTGAAGCAAAGACTGACTGGGAA...GCCCATCTGCATGAATGACAGGCAGCTCCCCATGGTGGTCTGCCTGTGAGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp CACCATGGGGAGCTGCCTGTCATTCATGCAGATGGGCAGGCAACGACATTAATGGGTAGTAGTGGGTGGTaGTCTCATAGATGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: HHGELPVIHADGQATTLMGSSGW*SHRCPP
Trigger: TGGAGGACATCTATGAGAGCACCACCCACTACTACC...CATTAATGTCGTTGCCTGCCCATCTGCATGAATGACAGGCAGCTCCCCATGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp TTAAGCTTTTCACGACAAACAGCACAGACCCAGGCGAGAGCTATCTACGTACACGTGGTCCAGGACAGGTaGCTCGGTGATGGTGATCTC +
Preference number: 4 (lower is better)
Translates to: LSFSRQTAQTQARAIYVHVVQDR*LGDGDL
Trigger: GAGATCACCATCACCGAGGCACCTGTCCTGGACCAC...GTGTACGTAGATAGCTCTCGCCTGGGTCTGTGCTGTTTGTCGTGAAAAGCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp CTGGAAGCTGGTGGGCACCGCTTCTCCTGCTCACAGCTTCAACAAGGCTTCTACATGTCTCCTGAAAATTaGAGTGACATAGGCACAGGC +
Preference number: 4 (lower is better)
Translates to: LEAGGHRFSCSQLQQGFYMSPEN*SDIGTG
Trigger: GCCTGTGCCTATGTCACTGCAATTTTCAGGAGACAT...GTAGAAGCCTTGTTGAAGCTGTGAGCAGGAGAAGCGGTGCCCACCAGCTTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp GCGAGGAAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAAGGAGAGAAACTGCCTTCCTCCCTCTaGCGGATAGACACCAGGTTT +
Preference number: 4 (lower is better)
Translates to: ARKLGKDKNGVLDFQGEKLPSSL*RIDTRF
Trigger: AAACCTGGTGTCTATCCGGCAGAGGGAGGAAGGCAG...TTTCTCTCCTTGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTTCCTCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp AGGAAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAAGGAGAGAAAAGGGCTCCTGCTAAGCCCTaGTCCACTTGCTCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: RKLGKDKNGVLDFQGEKRAPAKP*STCSAF
Trigger: GAAGGCAGAGCAAGTGGAGCAGGGCTTAGCAGGAGC...CCTTTTCTCTCCTTGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp AGGAAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAAGGAGAGAAAAGGGGGCACCGCTTCTCCTaGTCACAGCTTCAACAAGGC +
Preference number: 4 (lower is better)
Translates to: RKLGKDKNGVLDFQGEKRGHRFS*SQLQQG
Trigger: GCCTTGTTGAAGCTGTGAGCAGGAGAAGCGGTGCCC...CCTTTTCTCTCCTTGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp CAGAGTGGGAGTCTGGGTAGATGCTCCATATGGCTTTGCTTGGAGAAGGTGACAGCTATCTACGTACACTaGACAGAGCCACGGCACGTA +
Preference number: 4 (lower is better)
Translates to: QSGSLGRCSIWLCLEKVTAIYVH*TEPRHV
Trigger: TACGTGCCGTGGCTCTGTGCAGTGTACGTAGATAGC...TGTCACCTTCTCCAAGCAAAGCCATATGGAGCATCTACCCAGACTCCCACTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp TGTCATTCATGCAGATGGGCAGGCAACGACATTAATGAGCCCAATCTGGCCAAGGCTGCCTGTCATTCATaGAGATGGGCAGGCAACGAC +
Preference number: 4 (lower is better)
Translates to: CHSCRWAGNDINEPNLAKAACHS*RWAGND
Trigger: GTCGTTGCCTGCCCATCTGCATGAATGACAGGCAGC...CTTGGCCAGATTGGGCTCATTAATGTCGTTGCCTGCCCATCTGCATGAATGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp GAAGAGCTCACAGGCAGACCACCATGGGGAGCTGCCTGTCATTCATGCAGATGGAGGACAAGAATGGTGTaGTGGACTTTCAAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: EELTGRPPWGAACHSCRWRTRMV*WTFKER
Trigger: TCTCTCCTTGAAAGTCCAGCACACCATTCTTGTCCT...CCATCTGCATGAATGACAGGCAGCTCCCCATGGTGGTCTGCCTGTGAGCTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp CAGGGAGACCTGGAAGCTGGTGGGCACCGCTTCTCCTGCTCACAGCTTCAACAATTTCTTCACTTGGCATaGCCACTAAAAAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: QGDLEAGGHRFSCSQLQQFLHLA*PLKRSH
Trigger: GTGGCTTCTTTTTAGTGGGCATGCCAAGTGAAGAAA...TTGTTGAAGCTGTGAGCAGGAGAAGCGGTGCCCACCAGCTTCCAGGTCTCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651530.1
CDS-3UTR CCA 90 bp GGGGTGGAGGGCGAGGAAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCATTTTCCGGATGTTGGTaGTCTGTTTCTTCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: GVEGEETGEGQEWCAGLSFSGCW*SVSSRN
Trigger: GTTCCTGGAAGAAACAGACCACCAACATCCGGAAAA...TGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTTCCTCGCCCTCCACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp GGGGTGGAGGGCGAGGAAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCACGTTTCTTCATAGAATaGGGGGTATCCACAGAGCAA +
Preference number: 4 (lower is better)
Translates to: GVEGEETGEGQEWCAGLSRFFIE*GVSTEQ
Trigger: TTGCTCTGTGGATACCCCCCATTCTATGAAGAAACG...TGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTTCCTCGCCCTCCACCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp AGAGCTCACAGGCAGACCACCATGGGGAGCTGCCTGTCATTCATGCAGATGGGCTCCTTCTCAAGCAAGTaGCAAATAAAGTCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: RAHRQTTMGSCLSFMQMGSFSSK*QIKSLA
Trigger: AGCCAAGGACTTTATTTGCCACTTGCTTGAGAAGGA...GCCCATCTGCATGAATGACAGGCAGCTCCCCATGGTGGTCTGCCTGTGAGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp TTAAGCTTTTCACGACAAACAGCACAGACCCAGGCGAGAGCTATCTACGTACACGCAGGCTGGTGCTTCTaGCCAGAAACTGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: LSFSRQTAQTQARAIYVHAGWCF*PETAPA
Trigger: AGCAGGAGCAGTTTCTGGCCAGAAGCACCAGCCTGC...GTGTACGTAGATAGCTCTCGCCTGGGTCTGTGCTGTTTGTCGTGAAAAGCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp AAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAAGGAGAGAAAAGGGAAACGGCACGTAGGGTGTaGGGCATAGAGCAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: KLGKDKNGVLDFQGEKRETARRV*GIEQAG
Trigger: ACCTGCCTGCTCTATGCCCCACACCCTACGTGCCGT...TTCCCTTTTCTCTCCTTGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp CCTGTCATTCATGCAGATGGGCAGGCAACGACATTAATGAGCCCAATCTGGCCATGCAGAGTGGGAGTCTaGGTAGATGCTCCATATGGC +
Preference number: 4 (lower is better)
Translates to: PVIHADGQATTLMSPIWPCRVGV*VDAPYG
Trigger: GCCATATGGAGCATCTACCCAGACTCCCACTCTGCA...TGGCCAGATTGGGCTCATTAATGTCGTTGCCTGCCCATCTGCATGAATGACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp AAGCTTTTCACGACAAACAGCACAGACCCAGGCGAGAGCTATCTACGTACACTGATCTGGCCAAGAGGTTaGAGGCTTGAGAGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: KLFTTNSTDPGESYLRTLIWPRG*RLERWE
Trigger: CTCCCACCTCTCAAGCCTCCAACCTCTTGGCCAGAT...CAGTGTACGTAGATAGCTCTCGCCTGGGTCTGTGCTGTTTGTCGTGAAAAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp AAGCTTTTCACGACAAACAGCACAGACCCAGGCGAGAGCTATCTACGTACACTGACAGGCAGACCACCATaGGGAGCTGCCTGTCATTCA +
Preference number: 4 (lower is better)
Translates to: KLFTTNSTDPGESYLRTLTGRPP*GAACHS
Trigger: TGAATGACAGGCAGCTCCCCATGGTGGTCTGCCTGT...CAGTGTACGTAGATAGCTCTCGCCTGGGTCTGTGCTGTTTGTCGTGAAAAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp AGGAAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAAGGAGAGAAAAGGCAGAAGTGTGCTGGCTaGGTCTCAGCGCACTTGGGA +
Preference number: 4 (lower is better)
Translates to: RKLGKDKNGVLDFQGEKRQKCAG*VSAHLG
Trigger: TCCCAAGTGCGCTGAGACCCAGCCAGCACACTTCTG...CCTTTTCTCTCCTTGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp GCAGGCTGGTGCTTCTGGCCAGAAACTGCTCCTGCTAAGCCCTGCTCCACTTGCACAAGAATGGTGTGCTaGACTTTCAAGGAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: AGWCFWPETAPAKPCSTCTRMVC*TFKERK
Trigger: TTTTCTCTCCTTGAAAGTCCAGCACACCATTCTTGT...GCAAGTGGAGCAGGGCTTAGCAGGAGCAGTTTCTGGCCAGAAGCACCAGCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR TCA 90 bp AAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAAGGAGAGAAAAGGGAAGGGAAGAATCCTGCTTaGGCTCCCACTCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: KLGKDKNGVLDFQGEKREGKNPA*APTPAP
Trigger: AGGAGCTGGAGTGGGAGCTCAAGCAGGATTCTTCCC...TTCCCTTTTCTCTCCTTGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR TCA 90 bp GCGAGGAAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAAGGAGAGAAACAGAAACAAGCTGCATaGCCAGGTAGTAGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: ARKLGKDKNGVLDFQGEKQKQAA*PGSSGW
Trigger: CCACCCACTACTACCTGGTCATGCAGCTTGTTTCTG...TTTCTCTCCTTGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTTCCTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR TCA 90 bp GGGGTGGAGGGCGAGGAAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAAATAAAGTCCTTGGCTaGCTCAGAAATGTCATCCCA +
Preference number: 4 (lower is better)
Translates to: GVEGEETGEGQEWCAGLSNKVLG*LRNVIP
Trigger: TGGGATGACATTTCTGAGTCAGCCAAGGACTTTATT...TGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTTCCTCGCCCTCCACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR TCA 90 bp GAAGAGCTCACAGGCAGACCACCATGGGGAGCTGCCTGTCATTCATGCAGATGGAGAGTGCAGATACAGTaGGAACAAAAAGACTCGTCT +
Preference number: 4 (lower is better)
Translates to: EELTGRPPWGAACHSCRWRVQIQ*EQKDSS
Trigger: AGACGAGTCTTTTTGTTCTCACTGTATCTGCACTCT...CCATCTGCATGAATGACAGGCAGCTCCCCATGGTGGTCTGCCTGTGAGCTCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651530.1
CDS-3UTR TCA 90 bp CAGAGTGGGAGTCTGGGTAGATGCTCCATATGGCTTTGCTTGGAGAAGGTGACAATGCCACTTTCAATGTaGCTCAGGATGGCACACTGG +
Preference number: 4 (lower is better)
Translates to: QSGSLGRCSIWLCLEKVTMPLSM*LRMAHW
Trigger: CCAGTGTGCCATCCTGAGTCACATTGAAAGTGGCAT...TGTCACCTTCTCCAAGCAAAGCCATATGGAGCATCTACCCAGACTCCCACTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651530.1
CDS-3UTR TCA 90 bp CATTGGGTGTGTGCACGGAGGACATGTGGCCAGGATAAGAATTCCTTGCAGCCCTCTATAGTTTGGGAATaGCCCCTAGAGACAGAGACT +
Preference number: 4 (lower is better)
Translates to: HWVCARRTCGQDKNSLQPSIVWE*PLETET
Trigger: AGTCTCTGTCTCTAGGGGTCATTCCCAAACTATAGA...GGGCTGCAAGGAATTCTTATCCTGGCCACATGTCCTCCGTGCACACACCCAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651530.1
CDS-3UTR GCA 90 bp TTCCTTGCAGCCCTTACTCATGAACTTCTTTCTATTCCACTTTGGAGGGTGTGGTCTCATTCTCCAGGCTaGTGTCCCGGAAGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: FLAALTHELLSIPLWRVWSHSPG*CPGRQV
Trigger: CACCTGCCTTCCGGGACAGCAGCCTGGAGAATGAGA...CCACACCCTCCAAAGTGGAATAGAAAGAAGTTCATGAGTAAGGGCTGCAAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp TTCCTTGCAGCCCTTACTCATGAACTTCTTTCTATTCCACTTTGGAGGGTGTGGGTGCACCACAGCTGCTaGGTTGAAGGCTTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: FLAALTHELLSIPLWRVWVHHSC*VEGLPP
Trigger: TGGAGGCAAGCCTTCAACGCAGCAGCTGTGGTGCAC...CCACACCCTCCAAAGTGGAATAGAAAGAAGTTCATGAGTAAGGGCTGCAAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp ACATGTGGCCAGGATAAGAATTCCTTGCAGCCCTTACTCATGAACTTCTTTCTAAGACAGACTCCAGTCTaGCCTGCCCGGCAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: TCGQDKNSLQPLLMNFFLRQTPV*PARQWE
Trigger: CTCCCACTGCCGGGCAGGGCAGACTGGAGTCTGTCT...TAGAAAGAAGTTCATGAGTAAGGGCTGCAAGGAATTCTTATCCTGGCCACATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp AGGAAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAAGGAGAGAAAAGGGCTGCCTGTCATTCATaGAGATGGGCAGGCAACGAC +
Preference number: 4 (lower is better)
Translates to: RKLGKDKNGVLDFQGEKRAACHS*RWAGND
Trigger: GTCGTTGCCTGCCCATCTGCATGAATGACAGGCAGC...CCTTTTCTCTCCTTGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp GCAGGCTGGTGCTTCTGGCCAGAAACTGCTCCTGCTAAGCCCTGCTCCACTTGCTACAGAGTCAATTCATaGCACTTTCAATGTGACTCA +
Preference number: 4 (lower is better)
Translates to: AGWCFWPETAPAKPCSTCYRVNS*HFQCDS
Trigger: TGAGTCACATTGAAAGTGGCATGAATTGACTCTGTA...GCAAGTGGAGCAGGGCTTAGCAGGAGCAGTTTCTGGCCAGAAGCACCAGCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651530.1
CDS-3UTR CCA 90 bp GGCTGGTGCTTCTGGCCAGAAACTGCTCCTGCTAAGCCCTGCTCCACTTGCTCTAAGTTGCTTACAAAGTaGCTCTTCAAATCCACTCAC +
Preference number: 4 (lower is better)
Translates to: GWCFWPETAPAKPCSTCSKLLTK*LFKSTH
Trigger: GTGAGTGGATTTGAAGAGCCACTTTGTAAGCAACTT...AGAGCAAGTGGAGCAGGGCTTAGCAGGAGCAGTTTCTGGCCAGAAGCACCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000009105.5
CDS-3UTR CCA 90 bp GAAGAGCTCACAGGCAGACCACCATGGGGAGCTGCCTGTCATTCATGCAGATGGTTAGCAAAGTTCTTCTaGATCTGGAGGCTGACTGAT +
Preference number: 4 (lower is better)
Translates to: EELTGRPPWGAACHSCRWLAKFF*IWRLTD
Trigger: ATCAGTCAGCCTCCAGATCCAGAAGAACTTTGCTAA...CCATCTGCATGAATGACAGGCAGCTCCCCATGGTGGTCTGCCTGTGAGCTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp TTTCACGACAAACAGCACAGACCCAGGCGAGAGCTATCTACGTACACTGCACAGGCCACTGGCTTTAACTaGTACCATGACCTCCGACTT +
Preference number: 4 (lower is better)
Translates to: FHDKQHRPRRELSTYTAQATGFN*YHDLRL
Trigger: AAGTCGGAGGTCATGGTACCAGTTAAAGCCAGTGGC...CTGTGCAGTGTACGTAGATAGCTCTCGCCTGGGTCTGTGCTGTTTGTCGTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp TGGGTGTGTGCACGGAGGACATGTGGCCAGGATAAGAATTCCTTGCAGCCCTTAGGTAGATGCTCCATATaGCTTTGCTTGGAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: WVCARRTCGQDKNSLQPLGRCSI*LCLEKV
Trigger: CACCTTCTCCAAGCAAAGCCATATGGAGCATCTACC...TAAGGGCTGCAAGGAATTCTTATCCTGGCCACATGTCCTCCGTGCACACACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp CATTGGGTGTGTGCACGGAGGACATGTGGCCAGGATAAGAATTCCTTGCAGCCCCTTTCTATTCCACTTTaGAGGGTGTGGCACTGCTTT +
Preference number: 4 (lower is better)
Translates to: HWVCARRTCGQDKNSLQPLSIPL*RVWHCF
Trigger: AAAGCAGTGCCACACCCTCCAAAGTGGAATAGAAAG...GGGCTGCAAGGAATTCTTATCCTGGCCACATGTCCTCCGTGCACACACCCAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp AGGAAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAAGGAGAGAAAAGGGGAGGGCGAGGAAACTaGGGAAGGACAAGAATGGTG +
Preference number: 4 (lower is better)
Translates to: RKLGKDKNGVLDFQGEKRGGRGN*GRTRMV
Trigger: CACCATTCTTGTCCTTCCCCAGTTTCCTCGCCCTCC...CCTTTTCTCTCCTTGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp GCGAGGAAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAAGGAGAGAAAGCTGGAGGTAGCAGATaGGACAGAGTGCAGATACAG +
Preference number: 4 (lower is better)
Translates to: ARKLGKDKNGVLDFQGEKAGGSR*DRVQIQ
Trigger: CTGTATCTGCACTCTGTCCCATCTGCTACCTCCAGC...TTTCTCTCCTTGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTTCCTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651530.1
CDS-3UTR TCA 90 bp TTAAGCTTTTCACGACAAACAGCACAGACCCAGGCGAGAGCTATCTACGTACACCAGAAACAAGCTGCATaGCCAGGTAGTAGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: LSFSRQTAQTQARAIYVHQKQAA*PGSSGW
Trigger: CCACCCACTACTACCTGGTCATGCAGCTTGTTTCTG...GTGTACGTAGATAGCTCTCGCCTGGGTCTGTGCTGTTTGTCGTGAAAAGCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR TCA 90 bp TGTCATTCATGCAGATGGGCAGGCAACGACATTAATGAGCCCAATCTGGCCAAGTCATGTGGGCGCTGCTaGGTTATGTTGATGGCAGTT +
Preference number: 4 (lower is better)
Translates to: CHSCRWAGNDINEPNLAKSCGRC*VMLMAV
Trigger: AACTGCCATCAACATAACTCAGCAGCGCCCACATGA...CTTGGCCAGATTGGGCTCATTAATGTCGTTGCCTGCCCATCTGCATGAATGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651530.1
CDS-3UTR GCA 90 bp GCGAGGAAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAAGGAGAGAAAGGGAGTCTGGGTAGATaGTCCATATGGCTTTGCTTG +
Preference number: 4 (lower is better)
Translates to: ARKLGKDKNGVLDFQGEKGSLGR*SIWLCL
Trigger: CAAGCAAAGCCATATGGAGCATCTACCCAGACTCCC...TTTCTCTCCTTGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTTCCTCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp AAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAAGGAGAGAAAAGGGAAACTCCATTGGGTGTGTaGACGGAGGACATGTGGCCA +
Preference number: 4 (lower is better)
Translates to: KLGKDKNGVLDFQGEKRETPLGV*TEDMWP
Trigger: TGGCCACATGTCCTCCGTGCACACACCCAATGGAGT...TTCCCTTTTCTCTCCTTGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp TTTCACGACAAACAGCACAGACCCAGGCGAGAGCTATCTACGTACACTGCACAGAGACAGAGACTCCACTaGAGCTGTGGAGAGATTTCT +
Preference number: 4 (lower is better)
Translates to: FHDKQHRPRRELSTYTAQRQRLH*SCGEIS
Trigger: AGAAATCTCTCCACAGCTGCAGTGGAGTCTCTGTCT...CTGTGCAGTGTACGTAGATAGCTCTCGCCTGGGTCTGTGCTGTTTGTCGTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651530.1
CDS-3UTR CCA 90 bp TGGGTGTGTGCACGGAGGACATGTGGCCAGGATAAGAATTCCTTGCAGCCCTTATTTTCCGGATGTTGGTaGTCTGTTTCTTCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: WVCARRTCGQDKNSLQPLFSGCW*SVSSRN
Trigger: GTTCCTGGAAGAAACAGACCACCAACATCCGGAAAA...TAAGGGCTGCAAGGAATTCTTATCCTGGCCACATGTCCTCCGTGCACACACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp TGTCATTCATGCAGATGGGCAGGCAACGACATTAATGAGCCCAATCTGGCCAAGCCAGGTAGTAGTGGGTaGTGCTCTCATAGATGTCCT +
Preference number: 4 (lower is better)
Translates to: CHSCRWAGNDINEPNLAKPGSSG*CSHRCP
Trigger: AGGACATCTATGAGAGCACCACCCACTACTACCTGG...CTTGGCCAGATTGGGCTCATTAATGTCGTTGCCTGCCCATCTGCATGAATGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp GGGCAGGCAACGACATTAATGAGCCCAATCTGGCCAAGAGGTTGGAGGCTTGAGTCCTTCTCAAGCAAGTaGCAAATAAAGTCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: GQATTLMSPIWPRGWRLESFSSK*QIKSLA
Trigger: AGCCAAGGACTTTATTTGCCACTTGCTTGAGAAGGA...CTCAAGCCTCCAACCTCTTGGCCAGATTGGGCTCATTAATGTCGTTGCCTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp ACATGTGGCCAGGATAAGAATTCCTTGCAGCCCTTACTCATGAACTTCTTTCTAGGGAGTGCTACACTGTaGTCCAGGACAGGTGCCTCG +
Preference number: 4 (lower is better)
Translates to: TCGQDKNSLQPLLMNFFLGSATL*SRTGAS
Trigger: CGAGGCACCTGTCCTGGACCACAGTGTAGCACTCCC...TAGAAAGAAGTTCATGAGTAAGGGCTGCAAGGAATTCTTATCCTGGCCACATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp AAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAAGGAGAGAAAAGGGAAACAGGCAGACCACCATaGGGAGCTGCCTGTCATTCA +
Preference number: 4 (lower is better)
Translates to: KLGKDKNGVLDFQGEKRETGRPP*GAACHS
Trigger: TGAATGACAGGCAGCTCCCCATGGTGGTCTGCCTGT...TTCCCTTTTCTCTCCTTGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR TCA 90 bp AGCCTGGCCAGCCCATTAAGCTTTTCACGACAAACAGCACAGACCCAGGCGAGAGAAGAGCAGAGGAGTTaGATATGTCTCCTGAAAATT +
Preference number: 4 (lower is better)
Translates to: SLASPLSFSRQTAQTQAREEQRS*ICLLKI
Trigger: AATTTTCAGGAGACATATTCAACTCCTCTGCTCTTC...TCTCGCCTGGGTCTGTGCTGTTTGTCGTGAAAAGCTTAATGGGCTGGCCAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR TCA 90 bp AGCCTGGCCAGCCCATTAAGCTTTTCACGACAAACAGCACAGACCCAGGCGAGAATTCATTCAGTAGGATaGTCCCAGCACTTCCATAAA +
Preference number: 4 (lower is better)
Translates to: SLASPLSFSRQTAQTQARIHSVG*SQHFHK
Trigger: TTTATGGAAGTGCTGGGATCATCCTACTGAATGAAT...TCTCGCCTGGGTCTGTGCTGTTTGTCGTGAAAAGCTTAATGGGCTGGCCAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651530.1
CDS-3UTR TCA 90 bp CAGAGTGGGAGTCTGGGTAGATGCTCCATATGGCTTTGCTTGGAGAAGGTGACAGCTGCTGAGTTATGTTaGTGGCAGTTGTATCTGACA +
Preference number: 4 (lower is better)
Translates to: QSGSLGRCSIWLCLEKVTAAELC*WQLYLT
Trigger: TGTCAGATACAACTGCCATCAACATAACTCAGCAGC...TGTCACCTTCTCCAAGCAAAGCCATATGGAGCATCTACCCAGACTCCCACTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651530.1
CDS-3UTR GCA 90 bp GAAGAGCTCACAGGCAGACCACCATGGGGAGCTGCCTGTCATTCATGCAGATGGAATAAATGCCCAAGTTaGTTACAAAGTGGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: EELTGRPPWGAACHSCRWNKCPS*LQSGSS
Trigger: TGAAGAGCCACTTTGTAAGCAACTTGGGCATTTATT...CCATCTGCATGAATGACAGGCAGCTCCCCATGGTGGTCTGCCTGTGAGCTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000009105.5
CDS-3UTR GCA 90 bp CACCATGGGGAGCTGCCTGTCATTCATGCAGATGGGCAGGCAACGACATTAATGTTCCCAGTCAGTCTTTaGTTCACCAGGAAAACTTCT +
Preference number: 4 (lower is better)
Translates to: HHGELPVIHADGQATTLMFPVSL*FTRKTS
Trigger: AGAAGTTTTCCTGGTGAAGCAAAGACTGACTGGGAA...CATTAATGTCGTTGCCTGCCCATCTGCATGAATGACAGGCAGCTCCCCATGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp TTAAGCTTTTCACGACAAACAGCACAGACCCAGGCGAGAGCTATCTACGTACACGGTAGTAGTGGGTGGTaGTCTCATAGATGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LSFSRQTAQTQARAIYVHGSSGW*SHRCPP
Trigger: TGGAGGACATCTATGAGAGCACCACCCACTACTACC...GTGTACGTAGATAGCTCTCGCCTGGGTCTGTGCTGTTTGTCGTGAAAAGCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp AATTCCTTGCAGCCCTTACTCATGAACTTCTTTCTATTCCACTTTGGAGGGTGTGTGGTCCAGGACAGGTaGCTCGGTGATGGTGATCTC +
Preference number: 4 (lower is better)
Translates to: NSLQPLLMNFFLFHFGGCVVQDR*LGDGDL
Trigger: GAGATCACCATCACCGAGGCACCTGTCCTGGACCAC...ACACCCTCCAAAGTGGAATAGAAAGAAGTTCATGAGTAAGGGCTGCAAGGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp ACATGTGGCCAGGATAAGAATTCCTTGCAGCCCTTACTCATGAACTTCTTTCTACTGGCAGCAGGCTGGTaGTTCTGGCCAGAAACTGCT +
Preference number: 4 (lower is better)
Translates to: TCGQDKNSLQPLLMNFFLLAAGW*FWPETA
Trigger: AGCAGTTTCTGGCCAGAAGCACCAGCCTGCTGCCAG...TAGAAAGAAGTTCATGAGTAAGGGCTGCAAGGAATTCTTATCCTGGCCACATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp TGTCATTCATGCAGATGGGCAGGCAACGACATTAATGAGCCCAATCTGGCCAAGTGCTCCATATGGCTTTaGTTGGAGAAGGTGACACAG +
Preference number: 4 (lower is better)
Translates to: CHSCRWAGNDINEPNLAKCSIWL*LEKVTQ
Trigger: CTGTGTCACCTTCTCCAAGCAAAGCCATATGGAGCA...CTTGGCCAGATTGGGCTCATTAATGTCGTTGCCTGCCCATCTGCATGAATGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp AGGAAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAAGGAGAGAAAAGGGGGAGTCTGGGTAGATaGTCCATATGGCTTTGCTTG +
Preference number: 4 (lower is better)
Translates to: RKLGKDKNGVLDFQGEKRGSLGR*SIWLCL
Trigger: CAAGCAAAGCCATATGGAGCATCTACCCAGACTCCC...CCTTTTCTCTCCTTGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp CCTGTCATTCATGCAGATGGGCAGGCAACGACATTAATGAGCCCAATCTGGCCATTTTCCGGATGTTGGTaGTCTGTTTCTTCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: PVIHADGQATTLMSPIWPFSGCW*SVSSRN
Trigger: GTTCCTGGAAGAAACAGACCACCAACATCCGGAAAA...TGGCCAGATTGGGCTCATTAATGTCGTTGCCTGCCCATCTGCATGAATGACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp AGGAAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAAGGAGAGAAAAGGCCAGGTAGTAGTGGGTaGTGCTCTCATAGATGTCCT +
Preference number: 4 (lower is better)
Translates to: RKLGKDKNGVLDFQGEKRPGSSG*CSHRCP
Trigger: AGGACATCTATGAGAGCACCACCCACTACTACCTGG...CCTTTTCTCTCCTTGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp TGTCATTCATGCAGATGGGCAGGCAACGACATTAATGAGCCCAATCTGGCCAAGACTCCACTGCAGCTGTaGAGAGATTTCTTCACTTGG +
Preference number: 4 (lower is better)
Translates to: CHSCRWAGNDINEPNLAKTPLQL*RDFFTW
Trigger: CCAAGTGAAGAAATCTCTCCACAGCTGCAGTGGAGT...CTTGGCCAGATTGGGCTCATTAATGTCGTTGCCTGCCCATCTGCATGAATGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651530.1
CDS-3UTR TCA 90 bp AGGAAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAAGGAGAGAAAAGGAGGCAGGTGACTTCTTaGTGCACTTCAGAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: RKLGKDKNGVLDFQGEKRRQVTS*CTSEQR
Trigger: TCTTTGCTCTGAAGTGCATCAAGAAGTCACCTGCCT...CCTTTTCTCTCCTTGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR TCA 90 bp TTAAGCTTTTCACGACAAACAGCACAGACCCAGGCGAGAGCTATCTACGTACACAGGCAGGTGACTTCTTaGTGCACTTCAGAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: LSFSRQTAQTQARAIYVHRQVTS*CTSEQR
Trigger: TCTTTGCTCTGAAGTGCATCAAGAAGTCACCTGCCT...GTGTACGTAGATAGCTCTCGCCTGGGTCTGTGCTGTTTGTCGTGAAAAGCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR TCA 90 bp CACCATGGGGAGCTGCCTGTCATTCATGCAGATGGGCAGGCAACGACATTAATGGAAGAGCAGAGGAGTTaGATATGTCTCCTGAAAATT +
Preference number: 4 (lower is better)
Translates to: HHGELPVIHADGQATTLMEEQRS*ICLLKI
Trigger: AATTTTCAGGAGACATATTCAACTCCTCTGCTCTTC...CATTAATGTCGTTGCCTGCCCATCTGCATGAATGACAGGCAGCTCCCCATGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR TCA 90 bp ACATGTGGCCAGGATAAGAATTCCTTGCAGCCCTTACTCATGAACTTCTTTCTACAGAGGCCAGGGTGCTaGGCAACCTCTCATTCATTC +
Preference number: 4 (lower is better)
Translates to: TCGQDKNSLQPLLMNFFLQRPGC*ATSHSF
Trigger: GAATGAATGAGAGGTTGCTCAGCACCCTGGCCTCTG...TAGAAAGAAGTTCATGAGTAAGGGCTGCAAGGAATTCTTATCCTGGCCACATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651530.1
CDS-3UTR GCA 90 bp TTCCTTGCAGCCCTTACTCATGAACTTCTTTCTATTCCACTTTGGAGGGTGTGGGGTAGTAGTGGGTGGTaGTCTCATAGATGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: FLAALTHELLSIPLWRVWGSSGW*SHRCPP
Trigger: TGGAGGACATCTATGAGAGCACCACCCACTACTACC...CCACACCCTCCAAAGTGGAATAGAAAGAAGTTCATGAGTAAGGGCTGCAAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp CTGGCTGGGTCTCAGCGCACTTGGGAGCTAATCCTGGAGTTAAGGATTAGAACTAGTCTCTGTGGACGATaGCATTCTCATGTAGGTATT +
Preference number: 4 (lower is better)
Translates to: LAGSQRTWELILELRIRTSLCGR*HSHVGI
Trigger: AATACCTACATGAGAATGGCATCGTCCACAGAGACT...AGTTCTAATCCTTAACTCCAGGATTAGCTCCCAAGTGCGCTGAGACCCAGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp AAGCTTTTCACGACAAACAGCACAGACCCAGGCGAGAGCTATCTACGTACACTGATGTCTCCTGAAAATTaGAGTGACATAGGCACAGGC +
Preference number: 4 (lower is better)
Translates to: KLFTTNSTDPGESYLRTLMSPEN*SDIGTG
Trigger: GCCTGTGCCTATGTCACTGCAATTTTCAGGAGACAT...CAGTGTACGTAGATAGCTCTCGCCTGGGTCTGTGCTGTTTGTCGTGAAAAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp ACATGTGGCCAGGATAAGAATTCCTTGCAGCCCTTACTCATGAACTTCTTTCTAGCTGCCTGTCATTCATaGAGATGGGCAGGCAACGAC +
Preference number: 4 (lower is better)
Translates to: TCGQDKNSLQPLLMNFFLAACHS*RWAGND
Trigger: GTCGTTGCCTGCCCATCTGCATGAATGACAGGCAGC...TAGAAAGAAGTTCATGAGTAAGGGCTGCAAGGAATTCTTATCCTGGCCACATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp GCGAGGAAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAAGGAGAGAAACGTTTCTTCATAGAATaGGGGGTATCCACAGAGCAA +
Preference number: 4 (lower is better)
Translates to: ARKLGKDKNGVLDFQGEKRFFIE*GVSTEQ
Trigger: TTGCTCTGTGGATACCCCCCATTCTATGAAGAAACG...TTTCTCTCCTTGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTTCCTCGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp CCTGTCATTCATGCAGATGGGCAGGCAACGACATTAATGAGCCCAATCTGGCCATTAGCAAAGTTCTTCTaGATCTGGAGGCTGACTGAT +
Preference number: 4 (lower is better)
Translates to: PVIHADGQATTLMSPIWPLAKFF*IWRLTD
Trigger: ATCAGTCAGCCTCCAGATCCAGAAGAACTTTGCTAA...TGGCCAGATTGGGCTCATTAATGTCGTTGCCTGCCCATCTGCATGAATGACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp TTAAGCTTTTCACGACAAACAGCACAGACCCAGGCGAGAGCTATCTACGTACACTTAATGAGCCCAATCTaGCCAAGAGGTTGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: LSFSRQTAQTQARAIYVHLMSPI*PRGWRL
Trigger: AAGCCTCCAACCTCTTGGCCAGATTGGGCTCATTAA...GTGTACGTAGATAGCTCTCGCCTGGGTCTGTGCTGTTTGTCGTGAAAAGCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp TGGGTGTGTGCACGGAGGACATGTGGCCAGGATAAGAATTCCTTGCAGCCCTTAACAAGAATGGTGTGCTaGACTTTCAAGGAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: WVCARRTCGQDKNSLQPLTRMVC*TFKERK
Trigger: TTTTCTCTCCTTGAAAGTCCAGCACACCATTCTTGT...TAAGGGCTGCAAGGAATTCTTATCCTGGCCACATGTCCTCCGTGCACACACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp CACCATGGGGAGCTGCCTGTCATTCATGCAGATGGGCAGGCAACGACATTAATGACAAGAATGGTGTGCTaGACTTTCAAGGAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: HHGELPVIHADGQATTLMTRMVC*TFKERK
Trigger: TTTTCTCTCCTTGAAAGTCCAGCACACCATTCTTGT...CATTAATGTCGTTGCCTGCCCATCTGCATGAATGACAGGCAGCTCCCCATGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp TTCCTTGCAGCCCTTACTCATGAACTTCTTTCTATTCCACTTTGGAGGGTGTGGAGGTTTTCCGGATGTTaGTGGTCTGTTTCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: FLAALTHELLSIPLWRVWRFSGC*WSVSSR
Trigger: CCTGGAAGAAACAGACCACCAACATCCGGAAAACCT...CCACACCCTCCAAAGTGGAATAGAAAGAAGTTCATGAGTAAGGGCTGCAAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp AAGCTTTTCACGACAAACAGCACAGACCCAGGCGAGAGCTATCTACGTACACTGTTAGCAAAGTTCTTCTaGATCTGGAGGCTGACTGAT +
Preference number: 4 (lower is better)
Translates to: KLFTTNSTDPGESYLRTLLAKFF*IWRLTD
Trigger: ATCAGTCAGCCTCCAGATCCAGAAGAACTTTGCTAA...CAGTGTACGTAGATAGCTCTCGCCTGGGTCTGTGCTGTTTGTCGTGAAAAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp TTAAGCTTTTCACGACAAACAGCACAGACCCAGGCGAGAGCTATCTACGTACACCTCTTCATTGTCATGTaGGCGCTGCTGAGTTATGTT +
Preference number: 4 (lower is better)
Translates to: LSFSRQTAQTQARAIYVHLFIVM*ALLSYV
Trigger: AACATAACTCAGCAGCGCCCACATGACAATGAAGAG...GTGTACGTAGATAGCTCTCGCCTGGGTCTGTGCTGTTTGTCGTGAAAAGCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651530.1
3UTR CAA 72 bp TGTGCACGGAGGACATGTGGCCAGGATAAGAATTCCTaGCAGCCCTTACTCATGAACTTCTTTCTATTCCAC +
Preference number: 4 (lower is better)
Translates to: CARRTCGQDKNS*QPLLMNFFLFH
Trigger: GTGGAATAGAAAGAAGTTCATGAGTAAGGGCTGCAAGGAATTCTTATCCTGGCCACATGTCCTCCGTGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR TCA 90 bp AGGAAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAAGGAGAGAAAAGGAATAAAGTCCTTGGCTaGCTCAGAAATGTCATCCCA +
Preference number: 4 (lower is better)
Translates to: RKLGKDKNGVLDFQGEKRNKVLG*LRNVIP
Trigger: TGGGATGACATTTCTGAGTCAGCCAAGGACTTTATT...CCTTTTCTCTCCTTGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp TTAAGCTTTTCACGACAAACAGCACAGACCCAGGCGAGAGCTATCTACGTACACAGTCTCTGTGGACGATaGCATTCTCATGTAGGTATT +
Preference number: 4 (lower is better)
Translates to: LSFSRQTAQTQARAIYVHSLCGR*HSHVGI
Trigger: AATACCTACATGAGAATGGCATCGTCCACAGAGACT...GTGTACGTAGATAGCTCTCGCCTGGGTCTGTGCTGTTTGTCGTGAAAAGCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp ACATGTGGCCAGGATAAGAATTCCTTGCAGCCCTTACTCATGAACTTCTTTCTACCAGGTAGTAGTGGGTaGTGCTCTCATAGATGTCCT +
Preference number: 4 (lower is better)
Translates to: TCGQDKNSLQPLLMNFFLPGSSG*CSHRCP
Trigger: AGGACATCTATGAGAGCACCACCCACTACTACCTGG...TAGAAAGAAGTTCATGAGTAAGGGCTGCAAGGAATTCTTATCCTGGCCACATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CCA 90 bp AGGAAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAAGGAGAGAAAAGGTGTCATTCATGCAGATaGGCAGGCAACGACATTAAT +
Preference number: 4 (lower is better)
Translates to: RKLGKDKNGVLDFQGEKRCHSCR*AGNDIN
Trigger: ATTAATGTCGTTGCCTGCCCATCTGCATGAATGACA...CCTTTTCTCTCCTTGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR GCA 90 bp ACATGTGGCCAGGATAAGAATTCCTTGCAGCCCTTACTCATGAACTTCTTTCTAAGGACAAGAATGGTGTaGTGGACTTTCAAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: TCGQDKNSLQPLLMNFFLRTRMV*WTFKER
Trigger: TCTCTCCTTGAAAGTCCAGCACACCATTCTTGTCCT...TAGAAAGAAGTTCATGAGTAAGGGCTGCAAGGAATTCTTATCCTGGCCACATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR TCA 90 bp AATTCCTTGCAGCCCTTACTCATGAACTTCTTTCTATTCCACTTTGGAGGGTGTAATAAAGTCCTTGGCTaGCTCAGAAATGTCATCCCA +
Preference number: 4 (lower is better)
Translates to: NSLQPLLMNFFLFHFGGCNKVLG*LRNVIP
Trigger: TGGGATGACATTTCTGAGTCAGCCAAGGACTTTATT...ACACCCTCCAAAGTGGAATAGAAAGAAGTTCATGAGTAAGGGCTGCAAGGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR TCA 90 bp AATTCCTTGCAGCCCTTACTCATGAACTTCTTTCTATTCCACTTTGGAGGGTGTGATGGCAGTTGTATCTaGCATGCTAATGTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: NSLQPLLMNFFLFHFGGCDGSCI*HANVLS
Trigger: AGAAAGCACATTAGCATGTCAGATACAACTGCCATC...ACACCCTCCAAAGTGGAATAGAAAGAAGTTCATGAGTAAGGGCTGCAAGGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651530.1
CDS-3UTR CCA 90 bp AATTCCTTGCAGCCCTTACTCATGAACTTCTTTCTATTCCACTTTGGAGGGTGTTCCTTCTCAAGCAAGTaGCAAATAAAGTCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: NSLQPLLMNFFLFHFGGCSFSSK*QIKSLA
Trigger: AGCCAAGGACTTTATTTGCCACTTGCTTGAGAAGGA...ACACCCTCCAAAGTGGAATAGAAAGAAGTTCATGAGTAAGGGCTGCAAGGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR TCA 90 bp AATTCCTTGCAGCCCTTACTCATGAACTTCTTTCTATTCCACTTTGGAGGGTGTAATTTTAGGTGGTGGTaGTCACTCTGTACCAGTTAT +
Preference number: 4 (lower is better)
Translates to: NSLQPLLMNFFLFHFGGCNFRWW*SLCTSY
Trigger: ATAACTGGTACAGAGTGATCACCACCACCTAAAATT...ACACCCTCCAAAGTGGAATAGAAAGAAGTTCATGAGTAAGGGCTGCAAGGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651530.1
CDS-3UTR CCA 90 bp AATTCCTTGCAGCCCTTACTCATGAACTTCTTTCTATTCCACTTTGGAGGGTGTGCAGGTGTTATTTCCTaGTTCTATAGTTTGGGAATG +
Preference number: 4 (lower is better)
Translates to: NSLQPLLMNFFLFHFGGCAGVIS*FYSLGM
Trigger: CATTCCCAAACTATAGAACCAGGAAATAACACCTGC...ACACCCTCCAAAGTGGAATAGAAAGAAGTTCATGAGTAAGGGCTGCAAGGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651530.1
CDS CCA 90 bp CTGCCACCAGGGGCAGTGGGCCGGCGGCCATGCTGGCAGGGTAATTaGGTCAGGGCAGGGAGTGCTACACTGTGGTCCAGGACAGGTGCC +
Preference number: 5 (lower is better)
Translates to: LPPGAVGRRPCWQGN*VRAGSATLWSRTGA
Trigger: GGCACCTGTCCTGGACCACAGTGTAGCACTCCCTGCCCTGACCCAATTACCCTGCCAGCATGGCCGCCGGCCCACTGCCCCTGGTGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS GCA 90 bp AGGCAGTTGAGGGACCTGCCACCAGGGGCAGTGGGCCGGCGGCCATaGTGGCAGGGTAATTGGGTCAGGGCAGGGAGTGCTACACTGTGG +
Preference number: 5 (lower is better)
Translates to: RQLRDLPPGAVGRRP*WQGNWVRAGSATLW
Trigger: CCACAGTGTAGCACTCCCTGCCCTGACCCAATTACCCTGCCAGCATGGCCGCCGGCCCACTGCCCCTGGTGGCAGGTCCCTCAACTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS CCA 90 bp CAGTTGAGGGACCTGCCACCAGGGGCAGTGGGCCGGCGGCCATGCTaGCAGGGTAATTGGGTCAGGGCAGGGAGTGCTACACTGTGGTCC +
Preference number: 5 (lower is better)
Translates to: QLRDLPPGAVGRRPC*QGNWVRAGSATLWS
Trigger: GGACCACAGTGTAGCACTCCCTGCCCTGACCCAATTACCCTGCCAGCATGGCCGCCGGCCCACTGCCCCTGGTGGCAGGTCCCTCAACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CAA 90 bp CCTCCTATGAGGGGCTGCCCCGCTGGCAGCAGGCTGGTGCTTCTGGCCAGAAACCAAGGCTTCTACGCCTaGGGGCTCCCTCCTGGGCCT +
Preference number: 5 (lower is better)
Translates to: PPMRGCPAGSRLVLLARNQGFYA*GLPPGP
Trigger: AGGCCCAGGAGGGAGCCCCAAGGCGTAGAAGCCTTG...GTTTCTGGCCAGAAGCACCAGCCTGCTGCCAGCGGGGCAGCCCCTCATAGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CAA 90 bp GCACCGCTTCTCCTGCTCACAGCTTCAACAAGGCTTCTACGCCTTGGGGCTCCCCAAGGCTTCTACGCCTaGGGGCTCCCTCCTGGGCCT +
Preference number: 5 (lower is better)
Translates to: APLLLLTASTRLLRLGAPQGFYA*GLPPGP
Trigger: AGGCCCAGGAGGGAGCCCCAAGGCGTAGAAGCCTTG...GGGAGCCCCAAGGCGTAGAAGCCTTGTTGAAGCTGTGAGCAGGAGAAGCGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS TCA 90 bp GTGATGGTGATCTCAGGGGAGCTGGGTCTAGAGGTTTCTGAGGCTTaGGTTTCAGGCGGCCTGTTCTCCACCTCTGGGCGGACGCCCGGG +
Preference number: 5 (lower is better)
Translates to: VMVISGELGLEVSEA*VSGGLFSTSGRTPG
Trigger: CCCGGGCGTCCGCCCAGAGGTGGAGAACAGGCCGCCTGAAACTCAAGCCTCAGAAACCTCTAGACCCAGCTCCCCTGAGATCACCATCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000494990.1
ENST00000651530.1
CDS GCA 90 bp GTTTCAGGCGGCCTGTTCTCCACCTCTGGGCGGACGCCCGGGCTGTaGAGGTTCATGTGTAGCTTCCTCATGTGGTGCACCACAGCTGCT +
Preference number: 5 (lower is better)
Translates to: VSGGLFSTSGRTPGL*RFMCSFLMWCTTAA
Trigger: AGCAGCTGTGGTGCACCACATGAGGAAGCTACACATGAACCTGCACAGCCCGGGCGTCCGCCCAGAGGTGGAGAACAGGCCGCCTGAAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000494990.1
ENST00000651530.1
CDS-3UTR CAA 90 bp GCAGCAGGCTGGTGCTTCTGGCCAGAAACTGCTCCTGCTAAGCCCTGCTCCACTCCATTGACCAGGCAGTaGAGGGACCTGCCACCAGGG +
Preference number: 5 (lower is better)
Translates to: AAGWCFWPETAPAKPCSTPLTRQ*RDLPPG
Trigger: CCCTGGTGGCAGGTCCCTCAACTGCCTGGTCAATGG...AGTGGAGCAGGGCTTAGCAGGAGCAGTTTCTGGCCAGAAGCACCAGCCTGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CAA 90 bp CCTCCTATGAGGGGCTGCCCCGCTGGCAGCAGGCTGGTGCTTCTGGCCAGAAACCAAGAGGTTGGAGGCTaGAGAGGTGGGAGTGAGTGT +
Preference number: 5 (lower is better)
Translates to: PPMRGCPAGSRLVLLARNQEVGG*RGGSEC
Trigger: ACACTCACTCCCACCTCTCAAGCCTCCAACCTCTTG...GTTTCTGGCCAGAAGCACCAGCCTGCTGCCAGCGGGGCAGCCCCTCATAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CAA 90 bp GCAGCAGGCTGGTGCTTCTGGCCAGAAACTGCTCCTGCTAAGCCCTGCTCCACTCGGGAAGAATCCTGCTaGAGCTCCCACTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: AAGWCFWPETAPAKPCSTREESC*SSHSSS
Trigger: GGAGCTGGAGTGGGAGCTCAAGCAGGATTCTTCCCG...AGTGGAGCAGGGCTTAGCAGGAGCAGTTTCTGGCCAGAAGCACCAGCCTGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CAA 90 bp CAACAAGGCTTCTACGCCTTGGGGCTCCCTCCTGGGCCTCCTATGAGGGGCTGCGGCACTGCTTTTAGATaGAGGCAGGGAGAAGGGCCA +
Preference number: 5 (lower is better)
Translates to: QQGFYALGLPPGPPMRGCGTAFR*RQGEGP
Trigger: TGGCCCTTCTCCCTGCCTCAATCTAAAAGCAGTGCC...GCAGCCCCTCATAGGAGGCCCAGGAGGGAGCCCCAAGGCGTAGAAGCCTTGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS TCA 90 bp TGCCTCGGTGATGGTGATCTCAGGGGAGCTGGGTCTAGAGGTTTCTaGGGCTTGAGTTTCAGGCGGCCTGTTCTCCACCTCTGGGCGGAC +
Preference number: 5 (lower is better)
Translates to: CLGDGDLRGAGSRGF*GLSFRRPVLHLWAD
Trigger: GTCCGCCCAGAGGTGGAGAACAGGCCGCCTGAAACTCAAGCCTCAGAAACCTCTAGACCCAGCTCCCCTGAGATCACCATCACCGAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CAA 90 bp ACCGCTTCTCCTGCTCACAGCTTCAACAAGGCTTCTACGCCTTGGGGCTCCCTCCGGGAAGAATCCTGCTaGAGCTCCCACTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: TASPAHSFNKASTPWGSLREESC*SSHSSS
Trigger: GGAGCTGGAGTGGGAGCTCAAGCAGGATTCTTCCCG...GAGGGAGCCCCAAGGCGTAGAAGCCTTGTTGAAGCTGTGAGCAGGAGAAGCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CAA 90 bp GCACCGCTTCTCCTGCTCACAGCTTCAACAAGGCTTCTACGCCTTGGGGCTCCCACCACAGCTGCTGCGTaGAAGGCTTGCCTCCACTTG +
Preference number: 5 (lower is better)
Translates to: APLLLLTASTRLLRLGAPTTAAA*KACLHL
Trigger: CAAGTGGAGGCAAGCCTTCAACGCAGCAGCTGTGGT...GGGAGCCCCAAGGCGTAGAAGCCTTGTTGAAGCTGTGAGCAGGAGAAGCGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CAA 90 bp GCAGGCTGGTGCTTCTGGCCAGAAACTGCTCCTGCTAAGCCCTGCTCCACTTGCTGCTGCGTTGAAGGCTaGCCTCCACTTGCTCTTAGC +
Preference number: 5 (lower is better)
Translates to: AGWCFWPETAPAKPCSTCCCVEG*PPLALS
Trigger: GCTAAGAGCAAGTGGAGGCAAGCCTTCAACGCAGCA...GCAAGTGGAGCAGGGCTTAGCAGGAGCAGTTTCTGGCCAGAAGCACCAGCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CAA 90 bp CATTGGGTGTGTGCACGGAGGACATGTGGCCAGGATAAGAATTCCTTGCAGCCCCCATTGACCAGGCAGTaGAGGGACCTGCCACCAGGG +
Preference number: 5 (lower is better)
Translates to: HWVCARRTCGQDKNSLQPPLTRQ*RDLPPG
Trigger: CCCTGGTGGCAGGTCCCTCAACTGCCTGGTCAATGG...GGGCTGCAAGGAATTCTTATCCTGGCCACATGTCCTCCGTGCACACACCCAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CAA 90 bp GCAGCAGGCTGGTGCTTCTGGCCAGAAACTGCTCCTGCTAAGCCCTGCTCCACTTGGGTCTCAGCGCACTaGGGAGCTAATCCTGGAGTT +
Preference number: 5 (lower is better)
Translates to: AAGWCFWPETAPAKPCSTWVSAH*GANPGV
Trigger: AACTCCAGGATTAGCTCCCAAGTGCGCTGAGACCCA...AGTGGAGCAGGGCTTAGCAGGAGCAGTTTCTGGCCAGAAGCACCAGCCTGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CAA 90 bp CTCACAGGCAGACCACCATGGGGAGCTGCCTGTCATTCATGCAGATGGGCAGGCGGCACTGCTTTTAGATaGAGGCAGGGAGAAGGGCCA +
Preference number: 5 (lower is better)
Translates to: LTGRPPWGAACHSCRWAGGTAFR*RQGEGP
Trigger: TGGCCCTTCTCCCTGCCTCAATCTAAAAGCAGTGCC...GCCTGCCCATCTGCATGAATGACAGGCAGCTCCCCATGGTGGTCTGCCTGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CAA 90 bp CCTCCTATGAGGGGCTGCCCCGCTGGCAGCAGGCTGGTGCTTCTGGCCAGAAACTCTTTCTATTCCACTTaGGAGGGTGTGGCACTGCTT +
Preference number: 5 (lower is better)
Translates to: PPMRGCPAGSRLVLLARNSFYST*EGVALL
Trigger: AAGCAGTGCCACACCCTCCAAAGTGGAATAGAAAGA...GTTTCTGGCCAGAAGCACCAGCCTGCTGCCAGCGGGGCAGCCCCTCATAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CAA 90 bp CAACAAGGCTTCTACGCCTTGGGGCTCCCTCCTGGGCCTCCTATGAGGGGCTGCAAGGCAGGTGACTTCTaGATGCACTTCAGAGCAAAG +
Preference number: 5 (lower is better)
Translates to: QQGFYALGLPPGPPMRGCKAGDF*MHFRAK
Trigger: CTTTGCTCTGAAGTGCATCAAGAAGTCACCTGCCTT...GCAGCCCCTCATAGGAGGCCCAGGAGGGAGCCCCAAGGCGTAGAAGCCTTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CAA 90 bp CTGGAAGCTGGTGGGCACCGCTTCTCCTGCTCACAGCTTCAACAAGGCTTCTACACCACAGCTGCTGCGTaGAAGGCTTGCCTCCACTTG +
Preference number: 5 (lower is better)
Translates to: LEAGGHRFSCSQLQQGFYTTAAA*KACLHL
Trigger: CAAGTGGAGGCAAGCCTTCAACGCAGCAGCTGTGGT...GTAGAAGCCTTGTTGAAGCTGTGAGCAGGAGAAGCGGTGCCCACCAGCTTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CAA 90 bp AAGCTGGTGGGCACCGCTTCTCCTGCTCACAGCTTCAACAAGGCTTCTACGCCTATGTGGAGGGAGCCATaGACCAGGCAGTTGAGGGAC +
Preference number: 5 (lower is better)
Translates to: KLVGTASPAHSFNKASTPMWREP*TRQLRD
Trigger: GTCCCTCAACTGCCTGGTCAATGGCTCCCTCCACAT...AGGCGTAGAAGCCTTGTTGAAGCTGTGAGCAGGAGAAGCGGTGCCCACCAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CAA 90 bp CTGGCTGGGTCTCAGCGCACTTGGGAGCTAATCCTGGAGTTAAGGATTAGAACTCAAGGCTTCTACGCCTaGGGGCTCCCTCCTGGGCCT +
Preference number: 5 (lower is better)
Translates to: LAGSQRTWELILELRIRTQGFYA*GLPPGP
Trigger: AGGCCCAGGAGGGAGCCCCAAGGCGTAGAAGCCTTG...AGTTCTAATCCTTAACTCCAGGATTAGCTCCCAAGTGCGCTGAGACCCAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CAA 90 bp GGCTGGTGCTTCTGGCCAGAAACTGCTCCTGCTAAGCCCTGCTCCACTTGCTCTTGGGTCTCAGCGCACTaGGGAGCTAATCCTGGAGTT +
Preference number: 5 (lower is better)
Translates to: GWCFWPETAPAKPCSTCSWVSAH*GANPGV
Trigger: AACTCCAGGATTAGCTCCCAAGTGCGCTGAGACCCA...AGAGCAAGTGGAGCAGGGCTTAGCAGGAGCAGTTTCTGGCCAGAAGCACCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS GCA 90 bp CACAGGCTCCAGGAATCACATAATGAGACAGACTCCAGTCTGCCCTaGCCGGCAGTGGGAGCTGCCACTGGCTTTAACTGGTACCATGAC +
Preference number: 5 (lower is better)
Translates to: HRLQESHNETDSSLP*PAVGAATGFNWYHD
Trigger: GTCATGGTACCAGTTAAAGCCAGTGGCAGCTCCCACTGCCGGGCAGGGCAGACTGGAGTCTGTCTCATTATGTGATTCCTGGAGCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS GCA 90 bp ATAGGCACAGGCTCCAGGAATCACATAATGAGACAGACTCCAGTCTaGCCTGCCCGGCAGTGGGAGCTGCCACTGGCTTTAACTGGTACC +
Preference number: 5 (lower is better)
Translates to: IGTGSRNHIMRQTPV*PARQWELPLALTGT
Trigger: GGTACCAGTTAAAGCCAGTGGCAGCTCCCACTGCCGGGCAGGGCAGACTGGAGTCTGTCTCATTATGTGATTCCTGGAGCCTGTGCCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CAA 90 bp GAAGAGCTCACAGGCAGACCACCATGGGGAGCTGCCTGTCATTCATGCAGATGGTGCTGCGTTGAAGGCTaGCCTCCACTTGCTCTTAGC +
Preference number: 5 (lower is better)
Translates to: EELTGRPPWGAACHSCRWCCVEG*PPLALS
Trigger: GCTAAGAGCAAGTGGAGGCAAGCCTTCAACGCAGCA...CCATCTGCATGAATGACAGGCAGCTCCCCATGGTGGTCTGCCTGTGAGCTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CAA 90 bp CATTGGGTGTGTGCACGGAGGACATGTGGCCAGGATAAGAATTCCTTGCAGCCCATGTGGAGGGAGCCATaGACCAGGCAGTTGAGGGAC +
Preference number: 5 (lower is better)
Translates to: HWVCARRTCGQDKNSLQPMWREP*TRQLRD
Trigger: GTCCCTCAACTGCCTGGTCAATGGCTCCCTCCACAT...GGGCTGCAAGGAATTCTTATCCTGGCCACATGTCCTCCGTGCACACACCCAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS CCA 90 bp AGGAATCACATAATGAGACAGACTCCAGTCTGCCCTGCCCGGCAGTaGGAGCTGCCACTGGCTTTAACTGGTACCATGACCTCCGACTTG +
Preference number: 5 (lower is better)
Translates to: RNHIMRQTPVCPARQ*ELPLALTGTMTSDL
Trigger: CAAGTCGGAGGTCATGGTACCAGTTAAAGCCAGTGGCAGCTCCCACTGCCGGGCAGGGCAGACTGGAGTCTGTCTCATTATGTGATTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CAA 90 bp GAAGAGCTCACAGGCAGACCACCATGGGGAGCTGCCTGTCATTCATGCAGATGGGCTTCTGAGGATGCCTaGATGCCAAAAGAGTCAGGG +
Preference number: 5 (lower is better)
Translates to: EELTGRPPWGAACHSCRWASEDA*MPKESG
Trigger: CCCTGACTCTTTTGGCATCAAGGCATCCTCAGAAGC...CCATCTGCATGAATGACAGGCAGCTCCCCATGGTGGTCTGCCTGTGAGCTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000009105.5
CDS-3UTR CAA 90 bp CTCACAGGCAGACCACCATGGGGAGCTGCCTGTCATTCATGCAGATGGGCAGGCTTTTTGTTGGCCTTTTaGAGGAGTGTGGGCTCAGAG +
Preference number: 5 (lower is better)
Translates to: LTGRPPWGAACHSCRWAGFLLAF*RSVGSE
Trigger: CTCTGAGCCCACACTCCTCAAAAAGGCCAACAAAAA...GCCTGCCCATCTGCATGAATGACAGGCAGCTCCCCATGGTGGTCTGCCTGTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CAA 90 bp AGCCTGGCCAGCCCATTAAGCTTTTCACGACAAACAGCACAGACCCAGGCGAGACCAAGGTTAACTCCATaGGGTGTGTGCACGGAGGAC +
Preference number: 5 (lower is better)
Translates to: SLASPLSFSRQTAQTQARPRLTP*GVCTED
Trigger: GTCCTCCGTGCACACACCCAATGGAGTTAACCTTGG...TCTCGCCTGGGTCTGTGCTGTTTGTCGTGAAAAGCTTAATGGGCTGGCCAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CAA 90 bp GCACCGCTTCTCCTGCTCACAGCTTCAACAAGGCTTCTACGCCTTGGGGCTCCCTCCTGGTTCTATAGTTaGGGAATGACCCCTAGAGAC +
Preference number: 5 (lower is better)
Translates to: APLLLLTASTRLLRLGAPSWFYS*GMTPRD
Trigger: GTCTCTAGGGGTCATTCCCAAACTATAGAACCAGGA...GGGAGCCCCAAGGCGTAGAAGCCTTGTTGAAGCTGTGAGCAGGAGAAGCGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651530.1
CDS-3UTR CAA 90 bp AAGCTTTTCACGACAAACAGCACAGACCCAGGCGAGAGCTATCTACGTACACTGCGGGAAGAATCCTGCTaGAGCTCCCACTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: KLFTTNSTDPGESYLRTLREESC*SSHSSS
Trigger: GGAGCTGGAGTGGGAGCTCAAGCAGGATTCTTCCCG...CAGTGTACGTAGATAGCTCTCGCCTGGGTCTGTGCTGTTTGTCGTGAAAAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CAA 90 bp AGAGCTCACAGGCAGACCACCATGGGGAGCTGCCTGTCATTCATGCAGATGGGCCTTCCCAGTCAGTCTTaGCTTCACCAGGAAAACTTC +
Preference number: 5 (lower is better)
Translates to: RAHRQTTMGSCLSFMQMGLPSQS*LHQENF
Trigger: GAAGTTTTCCTGGTGAAGCAAAGACTGACTGGGAAG...GCCCATCTGCATGAATGACAGGCAGCTCCCCATGGTGGTCTGCCTGTGAGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CAA 90 bp TGGGTGTGTGCACGGAGGACATGTGGCCAGGATAAGAATTCCTTGCAGCCCTTATGCTGCGTTGAAGGCTaGCCTCCACTTGCTCTTAGC +
Preference number: 5 (lower is better)
Translates to: WVCARRTCGQDKNSLQPLCCVEG*PPLALS
Trigger: GCTAAGAGCAAGTGGAGGCAAGCCTTCAACGCAGCA...TAAGGGCTGCAAGGAATTCTTATCCTGGCCACATGTCCTCCGTGCACACACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CAA 90 bp CAGAGTGGGAGTCTGGGTAGATGCTCCATATGGCTTTGCTTGGAGAAGGTGACAACCACAGCTGCTGCGTaGAAGGCTTGCCTCCACTTG +
Preference number: 5 (lower is better)
Translates to: QSGSLGRCSIWLCLEKVTTTAAA*KACLHL
Trigger: CAAGTGGAGGCAAGCCTTCAACGCAGCAGCTGTGGT...TGTCACCTTCTCCAAGCAAAGCCATATGGAGCATCTACCCAGACTCCCACTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CAA 90 bp AAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAAGGAGAGAAAAGGGAACCATTGACCAGGCAGTaGAGGGACCTGCCACCAGGG +
Preference number: 5 (lower is better)
Translates to: KLGKDKNGVLDFQGEKREPLTRQ*RDLPPG
Trigger: CCCTGGTGGCAGGTCCCTCAACTGCCTGGTCAATGG...TTCCCTTTTCTCTCCTTGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CAA 90 bp GCGAGGAAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAAGGAGAGAAAATGTGGAGGGAGCCATaGACCAGGCAGTTGAGGGAC +
Preference number: 5 (lower is better)
Translates to: ARKLGKDKNGVLDFQGEKMWREP*TRQLRD
Trigger: GTCCCTCAACTGCCTGGTCAATGGCTCCCTCCACAT...TTTCTCTCCTTGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTTCCTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CAA 90 bp CTGGAAGCTGGTGGGCACCGCTTCTCCTGCTCACAGCTTCAACAAGGCTTCTACTTTTTGTTGGCCTTTTaGAGGAGTGTGGGCTCAGAG +
Preference number: 5 (lower is better)
Translates to: LEAGGHRFSCSQLQQGFYFLLAF*RSVGSE
Trigger: CTCTGAGCCCACACTCCTCAAAAAGGCCAACAAAAA...GTAGAAGCCTTGTTGAAGCTGTGAGCAGGAGAAGCGGTGCCCACCAGCTTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CAA 90 bp CATTGGGTGTGTGCACGGAGGACATGTGGCCAGGATAAGAATTCCTTGCAGCCCTCCATATGGCTTTGCTaGGAGAAGGTGACACAGCCT +
Preference number: 5 (lower is better)
Translates to: HWVCARRTCGQDKNSLQPSIWLC*EKVTQP
Trigger: AGGCTGTGTCACCTTCTCCAAGCAAAGCCATATGGA...GGGCTGCAAGGAATTCTTATCCTGGCCACATGTCCTCCGTGCACACACCCAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CAA 90 bp GGGCAGGCAACGACATTAATGAGCCCAATCTGGCCAAGAGGTTGGAGGCTTGAGTCCATATGGCTTTGCTaGGAGAAGGTGACACAGCCT +
Preference number: 5 (lower is better)
Translates to: GQATTLMSPIWPRGWRLESIWLC*EKVTQP
Trigger: AGGCTGTGTCACCTTCTCCAAGCAAAGCCATATGGA...CTCAAGCCTCCAACCTCTTGGCCAGATTGGGCTCATTAATGTCGTTGCCTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CAA 90 bp CTGGCTGGGTCTCAGCGCACTTGGGAGCTAATCCTGGAGTTAAGGATTAGAACTGGCACTGCTTTTAGATaGAGGCAGGGAGAAGGGCCA +
Preference number: 5 (lower is better)
Translates to: LAGSQRTWELILELRIRTGTAFR*RQGEGP
Trigger: TGGCCCTTCTCCCTGCCTCAATCTAAAAGCAGTGCC...AGTTCTAATCCTTAACTCCAGGATTAGCTCCCAAGTGCGCTGAGACCCAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CAA 90 bp AGAGCTCACAGGCAGACCACCATGGGGAGCTGCCTGTCATTCATGCAGATGGGCCAGGATAAGAATTCCTaGCAGCCCTTACTCATGAAC +
Preference number: 5 (lower is better)
Translates to: RAHRQTTMGSCLSFMQMGQDKNS*QPLLMN
Trigger: GTTCATGAGTAAGGGCTGCAAGGAATTCTTATCCTG...GCCCATCTGCATGAATGACAGGCAGCTCCCCATGGTGGTCTGCCTGTGAGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CAA 90 bp CAGAGTGGGAGTCTGGGTAGATGCTCCATATGGCTTTGCTTGGAGAAGGTGACACCAAGGTTAACTCCATaGGGTGTGTGCACGGAGGAC +
Preference number: 5 (lower is better)
Translates to: QSGSLGRCSIWLCLEKVTPRLTP*GVCTED
Trigger: GTCCTCCGTGCACACACCCAATGGAGTTAACCTTGG...TGTCACCTTCTCCAAGCAAAGCCATATGGAGCATCTACCCAGACTCCCACTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CAA 90 bp CATTGGGTGTGTGCACGGAGGACATGTGGCCAGGATAAGAATTCCTTGCAGCCCAAGGTTTTCCGGATGTaGGTGGTCTGTTTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: HWVCARRTCGQDKNSLQPKVFRM*VVCFFQ
Trigger: CTGGAAGAAACAGACCACCAACATCCGGAAAACCTT...GGGCTGCAAGGAATTCTTATCCTGGCCACATGTCCTCCGTGCACACACCCAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CAA 90 bp AGCCTGGCCAGCCCATTAAGCTTTTCACGACAAACAGCACAGACCCAGGCGAGAAAGGCTTGCCTCCACTaGCTCTTAGCAAAGTTCTTC +
Preference number: 5 (lower is better)
Translates to: SLASPLSFSRQTAQTQARKACLH*LLAKFF
Trigger: GAAGAACTTTGCTAAGAGCAAGTGGAGGCAAGCCTT...TCTCGCCTGGGTCTGTGCTGTTTGTCGTGAAAAGCTTAATGGGCTGGCCAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CAA 90 bp GGGCAGGCAACGACATTAATGAGCCCAATCTGGCCAAGAGGTTGGAGGCTTGAGTTTTTGTTGGCCTTTTaGAGGAGTGTGGGCTCAGAG +
Preference number: 5 (lower is better)
Translates to: GQATTLMSPIWPRGWRLEFLLAF*RSVGSE
Trigger: CTCTGAGCCCACACTCCTCAAAAAGGCCAACAAAAA...CTCAAGCCTCCAACCTCTTGGCCAGATTGGGCTCATTAATGTCGTTGCCTGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CAA 90 bp AAGCTTTTCACGACAAACAGCACAGACCCAGGCGAGAGCTATCTACGTACACTGCAAGAGGTTGGAGGCTaGAGAGGTGGGAGTGAGTGT +
Preference number: 5 (lower is better)
Translates to: KLFTTNSTDPGESYLRTLQEVGG*RGGSEC
Trigger: ACACTCACTCCCACCTCTCAAGCCTCCAACCTCTTG...CAGTGTACGTAGATAGCTCTCGCCTGGGTCTGTGCTGTTTGTCGTGAAAAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CAA 90 bp GCGAGGAAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAAGGAGAGAAATGGGTCTCAGCGCACTaGGGAGCTAATCCTGGAGTT +
Preference number: 5 (lower is better)
Translates to: ARKLGKDKNGVLDFQGEKWVSAH*GANPGV
Trigger: AACTCCAGGATTAGCTCCCAAGTGCGCTGAGACCCA...TTTCTCTCCTTGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTTCCTCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CAA 90 bp GCGAGGAAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAAGGAGAGAAACCAAGGTTAACTCCATaGGGTGTGTGCACGGAGGAC +
Preference number: 5 (lower is better)
Translates to: ARKLGKDKNGVLDFQGEKPRLTP*GVCTED
Trigger: GTCCTCCGTGCACACACCCAATGGAGTTAACCTTGG...TTTCTCTCCTTGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTTCCTCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS CCA 90 bp TCAATTCATGCCACTTTCAATGTGACTCAGGATGGCACACTGGAGTaGCAGCTGGAGGTAGCAGATGGGACAGAGTGCAGATACAGTGAG +
Preference number: 5 (lower is better)
Translates to: SIHATFNVTQDGTLE*QLEVADGTECRYSE
Trigger: CTCACTGTATCTGCACTCTGTCCCATCTGCTACCTCCAGCTGCCACTCCAGTGTGCCATCCTGAGTCACATTGAAAGTGGCATGAATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651530.1
CDS CCA 90 bp CTTCTGAGAAAGCTCCTCCAGTTGCCCAAACTGGTCTTGAACTCCTaGGATCAAGCAGCTCTTCTCCTTTGGCTTTCCAAAGCGTTGGGA +
Preference number: 5 (lower is better)
Translates to: LLRKLLQLPKLVLNS*DQAALLLWLSKALG
Trigger: TCCCAACGCTTTGGAAAGCCAAAGGAGAAGAGCTGCTTGATCCCAGGAGTTCAAGACCAGTTTGGGCAACTGGAGGAGCTTTCTCAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651530.1
CDS-3UTR CAA 90 bp CACCATGGGGAGCTGCCTGTCATTCATGCAGATGGGCAGGCAACGACATTAATGAAGGTTTTCCGGATGTaGGTGGTCTGTTTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: HHGELPVIHADGQATTLMKVFRM*VVCFFQ
Trigger: CTGGAAGAAACAGACCACCAACATCCGGAAAACCTT...CATTAATGTCGTTGCCTGCCCATCTGCATGAATGACAGGCAGCTCCCCATGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CAA 90 bp TTAAGCTTTTCACGACAAACAGCACAGACCCAGGCGAGAGCTATCTACGTACACCAAGAGGTTGGAGGCTaGAGAGGTGGGAGTGAGTGT +
Preference number: 5 (lower is better)
Translates to: LSFSRQTAQTQARAIYVHQEVGG*RGGSEC
Trigger: ACACTCACTCCCACCTCTCAAGCCTCCAACCTCTTG...GTGTACGTAGATAGCTCTCGCCTGGGTCTGTGCTGTTTGTCGTGAAAAGCTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CAA 90 bp CACCATGGGGAGCTGCCTGTCATTCATGCAGATGGGCAGGCAACGACATTAATGTCTTTCTATTCCACTTaGGAGGGTGTGGCACTGCTT +
Preference number: 5 (lower is better)
Translates to: HHGELPVIHADGQATTLMSFYST*EGVALL
Trigger: AAGCAGTGCCACACCCTCCAAAGTGGAATAGAAAGA...CATTAATGTCGTTGCCTGCCCATCTGCATGAATGACAGGCAGCTCCCCATGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS TCA 90 bp TCAGGGGCTAGGCAGGTGTTATTTCCTGGTTCTATAGTTTGGGAATaGCCCCTAGAGACAGAGACTCCACTGCAGCTGTGGAGAGATTTC +
Preference number: 5 (lower is better)
Translates to: SGARQVLFPGSIVWE*PLETETPLQLWRDF
Trigger: GAAATCTCTCCACAGCTGCAGTGGAGTCTCTGTCTCTAGGGGTCATTCCCAAACTATAGAACCAGGAAATAACACCTGCCTAGCCCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651530.1
CDS-3UTR CAA 90 bp CTGGCTGGGTCTCAGCGCACTTGGGAGCTAATCCTGGAGTTAAGGATTAGAACTAAGGTTTTCCGGATGTaGGTGGTCTGTTTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: LAGSQRTWELILELRIRTKVFRM*VVCFFQ
Trigger: CTGGAAGAAACAGACCACCAACATCCGGAAAACCTT...AGTTCTAATCCTTAACTCCAGGATTAGCTCCCAAGTGCGCTGAGACCCAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CAA 90 bp CTGGCTGGGTCTCAGCGCACTTGGGAGCTAATCCTGGAGTTAAGGATTAGAACTAAGGCAGGTGACTTCTaGATGCACTTCAGAGCAAAG +
Preference number: 5 (lower is better)
Translates to: LAGSQRTWELILELRIRTKAGDF*MHFRAK
Trigger: CTTTGCTCTGAAGTGCATCAAGAAGTCACCTGCCTT...AGTTCTAATCCTTAACTCCAGGATTAGCTCCCAAGTGCGCTGAGACCCAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CAA 90 bp CTGGCTGGGTCTCAGCGCACTTGGGAGCTAATCCTGGAGTTAAGGATTAGAACTCCATTCTGTTCCATCTaGGACAGACCAAAGTCAGTG +
Preference number: 5 (lower is better)
Translates to: LAGSQRTWELILELRIRTPFCSI*DRPKSV
Trigger: CACTGACTTTGGTCTGTCCAAGATGGAACAGAATGG...AGTTCTAATCCTTAACTCCAGGATTAGCTCCCAAGTGCGCTGAGACCCAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CAA 90 bp CCTGTCATTCATGCAGATGGGCAGGCAACGACATTAATGAGCCCAATCTGGCCACCATTCTGTTCCATCTaGGACAGACCAAAGTCAGTG +
Preference number: 5 (lower is better)
Translates to: PVIHADGQATTLMSPIWPPFCSI*DRPKSV
Trigger: CACTGACTTTGGTCTGTCCAAGATGGAACAGAATGG...TGGCCAGATTGGGCTCATTAATGTCGTTGCCTGCCCATCTGCATGAATGACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CAA 90 bp GCGAGGAAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAAGGAGAGAAATCCATATGGCTTTGCTaGGAGAAGGTGACACAGCCT +
Preference number: 5 (lower is better)
Translates to: ARKLGKDKNGVLDFQGEKSIWLC*EKVTQP
Trigger: AGGCTGTGTCACCTTCTCCAAGCAAAGCCATATGGA...TTTCTCTCCTTGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTTCCTCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS GCA 90 bp TGCCCAAGTTGCTTACAAAGTGGCTCTTCAAATCCACTCACTAGGTaGTGCACGCTTCCCATTAAGCAAGGAGACCCTCTAAAGCCAAGA +
Preference number: 5 (lower is better)
Translates to: CPSCLQSGSSNPLTR*CTLPIKQGDPLKPR
Trigger: TCTTGGCTTTAGAGGGTCTCCTTGCTTAATGGGAAGCGTGCAGCACCTAGTGAGTGGATTTGAAGAGCCACTTTGTAAGCAACTTGGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000009105.5
CDS GCA 90 bp CACTTGGCATGCCCACTAAAAAGAAGCCACTACAGAGTCAATTCATaGCACTTTCAATGTGACTCAGGATGGCACACTGGAGTGGCAGCT +
Preference number: 5 (lower is better)
Translates to: HLACPLKRSHYRVNS*HFQCDSGWHTGVAA
Trigger: AGCTGCCACTCCAGTGTGCCATCCTGAGTCACATTGAAAGTGGCATGAATTGACTCTGTAGTGGCTTCTTTTTAGTGGGCATGCCAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651530.1
CDS-3UTR CAA 90 bp GCGAGGAAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAAGGAGAGAAACTTCCCAGTCAGTCTTaGCTTCACCAGGAAAACTTC +
Preference number: 5 (lower is better)
Translates to: ARKLGKDKNGVLDFQGEKLPSQS*LHQENF
Trigger: GAAGTTTTCCTGGTGAAGCAAAGACTGACTGGGAAG...TTTCTCTCCTTGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTTCCTCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CAA 90 bp GCGAGGAAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAAGGAGAGAAAAAGGCAGGTGACTTCTaGATGCACTTCAGAGCAAAG +
Preference number: 5 (lower is better)
Translates to: ARKLGKDKNGVLDFQGEKKAGDF*MHFRAK
Trigger: CTTTGCTCTGAAGTGCATCAAGAAGTCACCTGCCTT...TTTCTCTCCTTGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTTCCTCGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CAA 90 bp TTCCTTGCAGCCCTTACTCATGAACTTCTTTCTATTCCACTTTGGAGGGTGTGGCTTCCTTTCGACCCATaGCCTCCAGAGTTGAAGCTT +
Preference number: 5 (lower is better)
Translates to: FLAALTHELLSIPLWRVWLPFDP*PPELKL
Trigger: AAGCTTCAACTCTGGAGGCAATGGGTCGAAAGGAAG...CCACACCCTCCAAAGTGGAATAGAAAGAAGTTCATGAGTAAGGGCTGCAAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS TCA 90 bp GGATGCCTTGATGCCAAAAGAGTCAGGGAAGACTGGAACTGGGGCTaGAATAAATGCCCAAGTTGCTTACAAAGTGGCTCTTCAAATCCA +
Preference number: 5 (lower is better)
Translates to: GCLDAKRVREDWNWG*NKCPSCLQSGSSNP
Trigger: TGGATTTGAAGAGCCACTTTGTAAGCAACTTGGGCATTTATTTCAGCCCCAGTTCCAGTCTTCCCTGACTCTTTTGGCATCAAGGCATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000009105.5
CDS GCA 90 bp CCAAGTTGCTTACAAAGTGGCTCTTCAAATCCACTCACTAGGTGCTaGACGCTTCCCATTAAGCAAGGAGACCCTCTAAAGCCAAGAAAA +
Preference number: 5 (lower is better)
Translates to: PSCLQSGSSNPLTRC*TLPIKQGDPLKPRK
Trigger: TTTTCTTGGCTTTAGAGGGTCTCCTTGCTTAATGGGAAGCGTGCAGCACCTAGTGAGTGGATTTGAAGAGCCACTTTGTAAGCAACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000009105.5
CDS-3UTR CAA 90 bp AAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAAGGAGAGAAAAGGGAACCATTCTGTTCCATCTaGGACAGACCAAAGTCAGTG +
Preference number: 5 (lower is better)
Translates to: KLGKDKNGVLDFQGEKREPFCSI*DRPKSV
Trigger: CACTGACTTTGGTCTGTCCAAGATGGAACAGAATGG...TTCCCTTTTCTCTCCTTGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CAA 90 bp AAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAAGGAGAGAAAAGGGAAAAGGCTTGCCTCCACTaGCTCTTAGCAAAGTTCTTC +
Preference number: 5 (lower is better)
Translates to: KLGKDKNGVLDFQGEKREKACLH*LLAKFF
Trigger: GAAGAACTTTGCTAAGAGCAAGTGGAGGCAAGCCTT...TTCCCTTTTCTCTCCTTGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CAA 90 bp TTCCTTGCAGCCCTTACTCATGAACTTCTTTCTATTCCACTTTGGAGGGTGTGGAAGGCTTGCCTCCACTaGCTCTTAGCAAAGTTCTTC +
Preference number: 5 (lower is better)
Translates to: FLAALTHELLSIPLWRVWKACLH*LLAKFF
Trigger: GAAGAACTTTGCTAAGAGCAAGTGGAGGCAAGCCTT...CCACACCCTCCAAAGTGGAATAGAAAGAAGTTCATGAGTAAGGGCTGCAAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CAA 90 bp AGGAAACTGGGGAAGGACAAGAATGGTGTGCTGGACTTTCAAGGAGAGAAAAGGCAGGATAAGAATTCCTaGCAGCCCTTACTCATGAAC +
Preference number: 5 (lower is better)
Translates to: RKLGKDKNGVLDFQGEKRQDKNS*QPLLMN
Trigger: GTTCATGAGTAAGGGCTGCAAGGAATTCTTATCCTG...CCTTTTCTCTCCTTGAAAGTCCAGCACACCATTCTTGTCCTTCCCCAGTTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS-3UTR CAA 90 bp AATTCCTTGCAGCCCTTACTCATGAACTTCTTTCTATTCCACTTTGGAGGGTGTCTTCCCAGTCAGTCTTaGCTTCACCAGGAAAACTTC +
Preference number: 5 (lower is better)
Translates to: NSLQPLLMNFFLFHFGGCLPSQS*LHQENF
Trigger: GAAGTTTTCCTGGTGAAGCAAAGACTGACTGGGAAG...ACACCCTCCAAAGTGGAATAGAAAGAAGTTCATGAGTAAGGGCTGCAAGGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS TCA 90 bp GAGGGAAGGACTGATAATTACTCTTCATTGTCATGTGGGCGCTGCTaGGTTATGTTGATGGCAGTTGTATCTGACATGCTAATGTGCTTT +
Preference number: 5 (lower is better)
Translates to: EGRTDNYSSLSCGRC*VMLMAVVSDMLMCF
Trigger: AAAGCACATTAGCATGTCAGATACAACTGCCATCAACATAACTCAGCAGCGCCCACATGACAATGAAGAGTAATTATCAGTCCTTCCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651530.1
CDS-3UTR CAA 90 bp ACATGTGGCCAGGATAAGAATTCCTTGCAGCCCTTACTCATGAACTTCTTTCTACAGGATAAGAATTCCTaGCAGCCCTTACTCATGAAC +
Preference number: 5 (lower is better)
Translates to: TCGQDKNSLQPLLMNFFLQDKNS*QPLLMN
Trigger: GTTCATGAGTAAGGGCTGCAAGGAATTCTTATCCTG...TAGAAAGAAGTTCATGAGTAAGGGCTGCAAGGAATTCTTATCCTGGCCACATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS TCA 90 bp ATTGTCATGTGGGCGCTGCTGAGTTATGTTGATGGCAGTTGTATCTaGCATGCTAATGTGCTTTCTAATTTGAAGACCATATTGGAAGAA +
Preference number: 5 (lower is better)
Translates to: IVMWALLSYVDGSCI*HANVLSNLKTILEE
Trigger: TTCTTCCAATATGGTCTTCAAATTAGAAAGCACATTAGCATGTCAGATACAACTGCCATCAACATAACTCAGCAGCGCCCACATGACAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651530.1
CDS CAA 90 bp GGCACCAGGCTGCTGCTGATGTGGAGGGAGCCATTGACCAGGCAGTaGAGGGACCTGCCACCAGGGGCAGTGGGCCGGCGGCCATGCTGG +
Preference number: 6 (lower is better)
Translates to: GTRLLLMWREPLTRQ*RDLPPGAVGRRPCW
Trigger: CCAGCATGGCCGCCGGCCCACTGCCCCTGGTGGCAGGTCCCTCAACTGCCTGGTCAATGGCTCCCTCCACATCAGCAGCAGCCTGGTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS CCA 72 bp GACCTGCCACCAGGGGCAGTGGGCCGGCGGCCATGCTaGCAGGGTAATTGGGTCAGGGCAGGGAGTGCTACA +
Preference number: 6 (lower is better)
Translates to: DLPPGAVGRRPC*QGNWVRAGSAT
Trigger: TGTAGCACTCCCTGCCCTGACCCAATTACCCTGCCAGCATGGCCGCCGGCCCACTGCCCCTGGTGGCAGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS GCA 72 bp GGCCTGTTCTCCACCTCTGGGCGGACGCCCGGGCTGTaGAGGTTCATGTGTAGCTTCCTCATGTGGTGCACC +
Preference number: 6 (lower is better)
Translates to: GLFSTSGRTPGL*RFMCSFLMWCT
Trigger: GGTGCACCACATGAGGAAGCTACACATGAACCTGCACAGCCCGGGCGTCCGCCCAGAGGTGGAGAACAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000494990.1
ENST00000651530.1
CDS CAA 72 bp ATGGGCACCAGGCTGCTGCTGATGTGGAGGGAGCCATaGACCAGGCAGTTGAGGGACCTGCCACCAGGGGCA +
Preference number: 6 (lower is better)
Translates to: MGTRLLLMWREP*TRQLRDLPPGA
Trigger: TGCCCCTGGTGGCAGGTCCCTCAACTGCCTGGTCAATGGCTCCCTCCACATCAGCAGCAGCCTGGTGCCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS GCA 72 bp CAGGGCAGGGAGTGCTACACTGTGGTCCAGGACAGGTaGCTCGGTGATGGTGATCTCAGGGGAGCTGGGTCT +
Preference number: 6 (lower is better)
Translates to: QGRECYTVVQDR*LGDGDLRGAGS
Trigger: AGACCCAGCTCCCCTGAGATCACCATCACCGAGGCACCTGTCCTGGACCACAGTGTAGCACTCCCTGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS TCA 72 bp ATCTCAGGGGAGCTGGGTCTAGAGGTTTCTGAGGCTTaGGTTTCAGGCGGCCTGTTCTCCACCTCTGGGCGG +
Preference number: 6 (lower is better)
Translates to: ISGELGLEVSEA*VSGGLFSTSGR
Trigger: CCGCCCAGAGGTGGAGAACAGGCCGCCTGAAACTCAAGCCTCAGAAACCTCTAGACCCAGCTCCCCTGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000494990.1
ENST00000651530.1
CDS TCA 72 bp GATGGTGATCTCAGGGGAGCTGGGTCTAGAGGTTTCTaGGGCTTGAGTTTCAGGCGGCCTGTTCTCCACCTC +
Preference number: 6 (lower is better)
Translates to: DGDLRGAGSRGF*GLSFRRPVLHL
Trigger: GAGGTGGAGAACAGGCCGCCTGAAACTCAAGCCTCAGAAACCTCTAGACCCAGCTCCCCTGAGATCACCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000494990.1
ENST00000651530.1
CDS CCA 72 bp ATAATGAGACAGACTCCAGTCTGCCCTGCCCGGCAGTaGGAGCTGCCACTGGCTTTAACTGGTACCATGACC +
Preference number: 6 (lower is better)
Translates to: IMRQTPVCPARQ*ELPLALTGTMT
Trigger: GGTCATGGTACCAGTTAAAGCCAGTGGCAGCTCCCACTGCCGGGCAGGGCAGACTGGAGTCTGTCTCATTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000651530.1
CDS CAA 90 bp CCCATTAAGCAAGGAGACCCTCTAAAGCCAAGAAAAGAAGCAGGGTaGTCTTACCCAGGGACTCGGGAAGAATCCTGCTTGAGCTCCCAC +
Preference number: 6 (lower is better)
Translates to: PIKQGDPLKPRKEAG*SYPGTREESCLSSH
Trigger: GTGGGAGCTCAAGCAGGATTCTTCCCGAGTCCCTGGGTAAGACAACCCTGCTTCTTTTCTTGGCTTTAGAGGGTCTCCTTGCTTAATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000009105.5
CDS CAA 90 bp TCTGTTTCTTCCAGGAACTGCAGTCATCTTCTTCCTTTCGACCCATaGCCTCCAGAGTTGAAGCTTCTGAGGATGCCAGGGACTCGGGAA +
Preference number: 6 (lower is better)
Translates to: SVSSRNCSHLLPFDP*PPELKLLRMPGTRE
Trigger: TTCCCGAGTCCCTGGCATCCTCAGAAGCTTCAACTCTGGAGGCAATGGGTCGAAAGGAAGAAGATGACTGCAGTTCCTGGAAGAAACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361322.3
ENST00000423146.5
ENST00000651530.1
CDS TCA 72 bp AGGCAGGTGTTATTTCCTGGTTCTATAGTTTGGGAATaGCCCCTAGAGACAGAGACTCCACTGCAGCTGTGG +
Preference number: 6 (lower is better)
Translates to: RQVLFPGSIVWE*PLETETPLQLW
Trigger: CCACAGCTGCAGTGGAGTCTCTGTCTCTAGGGGTCATTCCCAAACTATAGAACCAGGAAATAACACCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651530.1
CDS CAA 72 bp GGTCTTGAACTCCTGGGATCAAGCAGCTCTTCTCCTTaGGCTTTCCAAAGCGTTGGGATTACAGGTATGAGC +
Preference number: 6 (lower is better)
Translates to: GLELLGSSSSSP*AFQSVGITGMS
Trigger: GCTCATACCTGTAATCCCAACGCTTTGGAAAGCCAAAGGAGAAGAGCTGCTTGATCCCAGGAGTTCAAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651530.1
CDS CAA 90 bp CCAGGAAAACTTCTGAGAAAGCTCCTCCAGTTGCCCAAACTGGTCTaGAACTCCTGGGATCAAGCAGCTCTTCTCCTTTGGCTTTCCAAA +
Preference number: 6 (lower is better)
Translates to: PGKLLRKLLQLPKLV*NSWDQAALLLWLSK
Trigger: TTTGGAAAGCCAAAGGAGAAGAGCTGCTTGATCCCAGGAGTTCAAGACCAGTTTGGGCAACTGGAGGAGCTTTCTCAGAAGTTTTCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651530.1
CDS GCA 72 bp TGCTTACAAAGTGGCTCTTCAAATCCACTCACTAGGTaGTGCACGCTTCCCATTAAGCAAGGAGACCCTCTA +
Preference number: 6 (lower is better)
Translates to: CLQSGSSNPLTR*CTLPIKQGDPL
Trigger: TAGAGGGTCTCCTTGCTTAATGGGAAGCGTGCAGCACCTAGTGAGTGGATTTGAAGAGCCACTTTGTAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000009105.5
CDS CAA 72 bp AGAGACTCCACTGCAGCTGTGGAGAGATTTCTTCACTaGGCATGCCCACTAAAAAGAAGCCACTACAGAGTC +
Preference number: 6 (lower is better)
Translates to: RDSTAAVERFLH*ACPLKRSHYRV
Trigger: GACTCTGTAGTGGCTTCTTTTTAGTGGGCATGCCAAGTGAAGAAATCTCTCCACAGCTGCAGTGGAGTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651530.1
CDS CAA 90 bp CCTAGAGACAGAGACTCCACTGCAGCTGTGGAGAGATTTCTTCACTaGGCATGCCCACTAAAAAGAAGCCACTACAGAGTCAATTCATGC +
Preference number: 6 (lower is better)
Translates to: PRDRDSTAAVERFLH*ACPLKRSHYRVNSC
Trigger: GCATGAATTGACTCTGTAGTGGCTTCTTTTTAGTGGGCATGCCAAGTGAAGAAATCTCTCCACAGCTGCAGTGGAGTCTCTGTCTCTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651530.1
CDS TCA 72 bp GAACAAAAAGACTCGTCTCTCAATTTTAGGTGGTGGTaGTCACTCTGTACCAGTTATCAGAGGCCAGGGTGC +
Preference number: 6 (lower is better)
Translates to: EQKDSSLNFRWW*SLCTSYQRPGC
Trigger: GCACCCTGGCCTCTGATAACTGGTACAGAGTGATCACCACCACCTAAAATTGAGAGACGAGTCTTTTTGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651530.1
CDS TCA 72 bp GCTGGAGGTAGCAGATGGGACAGAGTGCAGATACAGTaGGAACAAAAAGACTCGTCTCTCAATTTTAGGTGG +
Preference number: 6 (lower is better)
Translates to: AGGSRWDRVQIQ*EQKDSSLNFRW
Trigger: CCACCTAAAATTGAGAGACGAGTCTTTTTGTTCTCACTGTATCTGCACTCTGTCCCATCTGCTACCTCCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651530.1
CDS GCA 72 bp TTACAAAGTGGCTCTTCAAATCCACTCACTAGGTGCTaGACGCTTCCCATTAAGCAAGGAGACCCTCTAAAG +
Preference number: 6 (lower is better)
Translates to: LQSGSSNPLTRC*TLPIKQGDPLK
Trigger: CTTTAGAGGGTCTCCTTGCTTAATGGGAAGCGTGCAGCACCTAGTGAGTGGATTTGAAGAGCCACTTTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000009105.5
CDS CAA 90 bp GCTCCTGATCCCAGCACTTCCATAAAAATGAAGGTTTTCCGGATGTaGGTGGTCTGTTTCTTCCAGGAACTGCAGTCATCTTCTTCCTTT +
Preference number: 6 (lower is better)
Translates to: APDPSTSIKMKVFRM*VVCFFQELQSSSSF
Trigger: AAAGGAAGAAGATGACTGCAGTTCCTGGAAGAAACAGACCACCAACATCCGGAAAACCTTCATTTTTATGGAAGTGCTGGGATCAGGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000423146.5
CDS GCA 72 bp TGCCCACTAAAAAGAAGCCACTACAGAGTCAATTCATaGCACTTTCAATGTGACTCAGGATGGCACACTGGA +
Preference number: 6 (lower is better)
Translates to: CPLKRSHYRVNS*HFQCDSGWHTG
Trigger: TCCAGTGTGCCATCCTGAGTCACATTGAAAGTGGCATGAATTGACTCTGTAGTGGCTTCTTTTTAGTGGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651530.1
CDS CAA 72 bp CCCAGCACTTCCATAAAAATGAAGGTTTTCCGGATGTaGGTGGTCTGTTTCTTCCAGGAACTGCAGTCATCT +
Preference number: 6 (lower is better)
Translates to: PSTSIKMKVFRM*VVCFFQELQSS
Trigger: AGATGACTGCAGTTCCTGGAAGAAACAGACCACCAACATCCGGAAAACCTTCATTTTTATGGAAGTGCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000423146.5
ENST00000651530.1
CDS CCA 72 bp CTTCTCGAAAAGCTTAGACTCCGTTTCTTCATAGAATaGGGGGTATCCACAGAGCAATATGTAGGTGATGAC +
Preference number: 6 (lower is better)
Translates to: LLEKLRLRFFIE*GVSTEQYVGDD
Trigger: GTCATCACCTACATATTGCTCTGTGGATACCCCCCATTCTATGAAGAAACGGAGTCTAAGCTTTTCGAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000009105.5
ENST00000361322.3
ENST00000494990.1
ENST00000651530.1
CDS TCA 72 bp TGGGCGCTGCTGAGTTATGTTGATGGCAGTTGTATCTaGCATGCTAATGTGCTTTCTAATTTGAAGACCATA +
Preference number: 6 (lower is better)
Translates to: WALLSYVDGSCI*HANVLSNLKTI
Trigger: TATGGTCTTCAAATTAGAAAGCACATTAGCATGTCAGATACAACTGCCATCAACATAACTCAGCAGCGCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651530.1
CDS TCA 72 bp ACTGATAATTACTCTTCATTGTCATGTGGGCGCTGCTaGGTTATGTTGATGGCAGTTGTATCTGACATGCTA +
Preference number: 6 (lower is better)
Translates to: TDNYSSLSCGRC*VMLMAVVSDML
Trigger: TAGCATGTCAGATACAACTGCCATCAACATAACTCAGCAGCGCCCACATGACAATGAAGAGTAATTATCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651530.1