RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CALN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000183166

Ensembl transcript IDs: ENST00000329008.9, ENST00000395275.7, ENST00000395276.6, ENST00000405452.3, ENST00000431984.5, ENST00000446128.1

Found 1641 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGGCAGCAGGGCAGGTAAGGGGGAAAGGCAGGTTGCTGCCTCCTTaGTCTGGCCTTGCTGGGCTGAACTCCAGGAAGTTTTGCAGAGGG +
Preference number: 1 (lower is better)
Translates to: QAAGQVRGKGRLLPP*SGLAGLNSRKFCRG
Trigger: CCCTCTGCAAAACTTCCTGGAGTTCAGCCCAGCAAGGCCAGACCAAGGAGGCAGCAACCTGCCTTTCCCCCTTACCTGCCCTGCTGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 90 bp TCATCCGGCATAGAGACGTGGTGGGTCTCCATGACTCCAGATGGCTaGGTGTGGGTATCAAAACCTCACCGCCAGTCCCAGTCCCCTCCC +
Preference number: 1 (lower is better)
Translates to: SSGIETWWVSMTPDG*VWVSKPHRQSQSPP
Trigger: GGGAGGGGACTGGGACTGGCGGTGAGGTTTTGATACCCACACCCAGCCATCTGGAGTCATGGAGACCCACCACGTCTCTATGCCGGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 90 bp GACCACACGTGGCCAGGCCAGCCCAAACCAGGGAGCTGTCCTGGGTaGTTGCATCCTTCATTTTCTGTCCATGCCCTCATAGGGCCTCAG +
Preference number: 1 (lower is better)
Translates to: DHTWPGQPKPGSCPG*LHPSFSVHALIGPQ
Trigger: CTGAGGCCCTATGAGGGCATGGACAGAAAATGAAGGATGCAACCACCCAGGACAGCTCCCTGGTTTGGGCTGGCCTGGCCACGTGTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 90 bp AAGGTCATCCGGCATAGAGACGTGGTGGGTCTCCATGACTCCAGATaGCTGGGTGTGGGTATCAAAACCTCACCGCCAGTCCCAGTCCCC +
Preference number: 1 (lower is better)
Translates to: KVIRHRDVVGLHDSR*LGVGIKTSPPVPVP
Trigger: GGGGACTGGGACTGGCGGTGAGGTTTTGATACCCACACCCAGCCATCTGGAGTCATGGAGACCCACCACGTCTCTATGCCGGATGACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 90 bp TGGCCTTGCTGGGCTGAACTCCAGGAAGTTTTGCAGAGGGACCTGTaGTCCCCCAGGCTCTTGGGAGCTTACATCTGCTCCCTCCTCCAT +
Preference number: 1 (lower is better)
Translates to: WPCWAELQEVLQRDL*SPRLLGAYICSLLH
Trigger: ATGGAGGAGGGAGCAGATGTAAGCTCCCAAGAGCCTGGGGGATCACAGGTCCCTCTGCAAAACTTCCTGGAGTTCAGCCCAGCAAGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 90 bp AAGGAAGGAGAGCAAGGACACAGTAAACACAGATCCCAGGACATGTaGCCACACGTGGCCAGGCCAGCCCAAACCAGGGAGCTGTCCTGG +
Preference number: 1 (lower is better)
Translates to: KEGEQGHSKHRSQDM*PHVARPAQTRELSW
Trigger: CCAGGACAGCTCCCTGGTTTGGGCTGGCCTGGCCACGTGTGGTCACATGTCCTGGGATCTGTGTTTACTGTGTCCTTGCTCTCCTTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 90 bp CACAGGCGGCAAAGCTGGGAGAAAGGCTCTCTGCAGGTTCCAAAATaGTGGTGCGGGATGGGCTCTAGGAACAGAAAGCCAAGTGCCGAC +
Preference number: 1 (lower is better)
Translates to: HRRQSWEKGSLQVPK*WCGMGSRNRKPSAD
Trigger: GTCGGCACTTGGCTTTCTGTTCCTAGAGCCCATCCCGCACCAGCATTTTGGAACCTGCAGAGAGCCTTTCTCCCAGCTTTGCCGCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 90 bp CTGCCTCCTTGGTCTGGCCTTGCTGGGCTGAACTCCAGGAAGTTTTaGAGAGGGACCTGTGATCCCCCAGGCTCTTGGGAGCTTACATCT +
Preference number: 1 (lower is better)
Translates to: LPPWSGLAGLNSRKF*RGTCDPPGSWELTS
Trigger: AGATGTAAGCTCCCAAGAGCCTGGGGGATCACAGGTCCCTCTGCAAAACTTCCTGGAGTTCAGCCCAGCAAGGCCAGACCAAGGAGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 90 bp AGGCGGCAAAGCTGGGAGAAAGGCTCTCTGCAGGTTCCAAAATGCTaGTGCGGGATGGGCTCTAGGAACAGAAAGCCAAGTGCCGACGGA +
Preference number: 1 (lower is better)
Translates to: RRQSWEKGSLQVPKC*CGMGSRNRKPSADG
Trigger: TCCGTCGGCACTTGGCTTTCTGTTCCTAGAGCCCATCCCGCACCAGCATTTTGGAACCTGCAGAGAGCCTTTCTCCCAGCTTTGCCGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 90 bp GGGGTGAGCTATTCCCTCTCAATTCCTGCGGAAGTCACTTCCAGCTaGGGCTACATGGCATCCCTTGGGCATGGGAGACCAGGACCTTCT +
Preference number: 1 (lower is better)
Translates to: GVSYSLSIPAEVTSS*GYMASLGHGRPGPS
Trigger: AGAAGGTCCTGGTCTCCCATGCCCAAGGGATGCCATGTAGCCCCAGCTGGAAGTGACTTCCGCAGGAATTGAGAGGGAATAGCTCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 90 bp AGCAAGGACACAGTAAACACAGATCCCAGGACATGTGACCACACGTaGCCAGGCCAGCCCAAACCAGGGAGCTGTCCTGGGTGGTTGCAT +
Preference number: 1 (lower is better)
Translates to: SKDTVNTDPRTCDHT*PGQPKPGSCPGWLH
Trigger: ATGCAACCACCCAGGACAGCTCCCTGGTTTGGGCTGGCCTGGCCACGTGTGGTCACATGTCCTGGGATCTGTGTTTACTGTGTCCTTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 90 bp CGGCAAAGCTGGGAGAAAGGCTCTCTGCAGGTTCCAAAATGCTGGTaGGGGATGGGCTCTAGGAACAGAAAGCCAAGTGCCGACGGAAAC +
Preference number: 1 (lower is better)
Translates to: RQSWEKGSLQVPKCW*GMGSRNRKPSADGN
Trigger: GTTTCCGTCGGCACTTGGCTTTCTGTTCCTAGAGCCCATCCCGCACCAGCATTTTGGAACCTGCAGAGAGCCTTTCTCCCAGCTTTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 90 bp TGGCGAGCTACCAGCCTGCTCTTGAAATGCACAGAGCCTTTCGTGTaGATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCAT +
Preference number: 1 (lower is better)
Translates to: WRATSLLLKCTEPFV*IRLMGSPMALNGLH
Trigger: ATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATCCACACGAAAGGCTCTGTGCATTTCAAGAGCAGGCTGGTAGCTCGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 90 bp AAAGCCCCCTCTTCTGTGGCAACCCTGAAGTCAGCCTCTTGGAACTaGGGGTTGACCTCAGCAGAGAGTCTCCTGTTGACCCTTGGGTTG +
Preference number: 1 (lower is better)
Translates to: KAPSSVATLKSASWN*GLTSAESLLLTLGL
Trigger: CAACCCAAGGGTCAACAGGAGACTCTCTGCTGAGGTCAACCCTCAGTTCCAAGAGGCTGACTTCAGGGTTGCCACAGAAGAGGGGGCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 90 bp TGCGGGATGGGCTCTAGGAACAGAAAGCCAAGTGCCGACGGAAACTaGGAGCACCCCAGCTCTACCAATGGCAGTCCTCTAGAAAAGGCA +
Preference number: 1 (lower is better)
Translates to: CGMGSRNRKPSADGN*EHPSSTNGSPLEKA
Trigger: TGCCTTTTCTAGAGGACTGCCATTGGTAGAGCTGGGGTGCTCTCAGTTTCCGTCGGCACTTGGCTTTCTGTTCCTAGAGCCCATCCCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 90 bp CAGCCAAGGTCACTGGTTCCTAAGTCCGGAGGACAGAATGAGGGGTaGGCTATTCCCTCTCAATTCCTGCGGAAGTCACTTCCAGCTGGG +
Preference number: 1 (lower is better)
Translates to: QPRSLVPKSGGQNEG*AIPSQFLRKSLPAG
Trigger: CCCAGCTGGAAGTGACTTCCGCAGGAATTGAGAGGGAATAGCTCACCCCTCATTCTGTCCTCCGGACTTAGGAACCAGTGACCTTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 90 bp GCCTTTCGTGTGGATCAGACTGATGGGCAGCCCCATGGCACTCAATaGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCT +
Preference number: 1 (lower is better)
Translates to: AFRVDQTDGQPHGTQ*PACFQSRPAIQRRP
Trigger: AGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATCCACACGAAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 90 bp AGGTCACTGGGAGCAAGAAGAAGGTCACCGTTAGGAAAGGAATCCTaGAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTC +
Preference number: 1 (lower is better)
Translates to: RSLGARRRSPLGKES*SLSRKQDGGASPEL
Trigger: GAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTCCTTTCCTAACGGTGACCTTCTTCTTGCTCCCAGTGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 90 bp GTCACCGTTAGGAAAGGAATCCTGCAGCCTTTCCAGAAAACAGGATaGCGGCGCCTCTCCAGAACTCCTTTTCCTCCCTACTCCTGCACA +
Preference number: 1 (lower is better)
Translates to: VTVRKGILQPFQKTG*RRLSRTPFPPYSCT
Trigger: TGTGCAGGAGTAGGGAGGAAAAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTCCTTTCCTAACGGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 90 bp ATTCCCTCTCAATTCCTGCGGAAGTCACTTCCAGCTGGGGCTACATaGCATCCCTTGGGCATGGGAGACCAGGACCTTCTGGAATCTTCA +
Preference number: 1 (lower is better)
Translates to: IPSQFLRKSLPAGAT*HPLGMGDQDLLESS
Trigger: TGAAGATTCCAGAAGGTCCTGGTCTCCCATGCCCAAGGGATGCCATGTAGCCCCAGCTGGAAGTGACTTCCGCAGGAATTGAGAGGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 90 bp GAGAGAGTTGAGAGCCACTGGCTTGTGCAACTCTCCACCAGGAGCTaGCAGGATCCTTTCTTGGCCAATCTAGGTCTTTCCCAGGGAGAA +
Preference number: 1 (lower is better)
Translates to: ERVESHWLVQLSTRS*QDPFLANLGLSQGE
Trigger: TTCTCCCTGGGAAAGACCTAGATTGGCCAAGAAAGGATCCTGTCAGCTCCTGGTGGAGAGTTGCACAAGCCAGTGGCTCTCAACTCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 90 bp AACTCCAGGAAGTTTTGCAGAGGGACCTGTGATCCCCCAGGCTCTTaGGAGCTTACATCTGCTCCCTCCTCCATATTATGGCTGAAGCCT +
Preference number: 1 (lower is better)
Translates to: NSRKFCRGTCDPPGS*ELTSAPSSILWLKP
Trigger: AGGCTTCAGCCATAATATGGAGGAGGGAGCAGATGTAAGCTCCCAAGAGCCTGGGGGATCACAGGTCCCTCTGCAAAACTTCCTGGAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 90 bp GGCGGCGCCTCTCCAGAACTCCTTTTCCTCCCTACTCCTGCACAGTaGCTAATCTCTCTGCCAATGAAATCTAACCCTCACCTCTTGAAG +
Preference number: 1 (lower is better)
Translates to: GGASPELLFLPTPAQ*LISLPMKSNPHLLK
Trigger: CTTCAAGAGGTGAGGGTTAGATTTCATTGGCAGAGAGATTAGCCACTGTGCAGGAGTAGGGAGGAAAAGGAGTTCTGGAGAGGCGCCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 90 bp TTTGTCAATCACTCAGCCTCCACACAGTTGGGCAGCCAAGGTCACTaGTTCCTAAGTCCGGAGGACAGAATGAGGGGTGAGCTATTCCCT +
Preference number: 1 (lower is better)
Translates to: FVNHSASTQLGSQGH*FLSPEDRMRGELFP
Trigger: AGGGAATAGCTCACCCCTCATTCTGTCCTCCGGACTTAGGAACCAGTGACCTTGGCTGCCCAACTGTGTGGAGGCTGAGTGATTGACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 90 bp ACCCTTGGGTTGAAAGAATGGGGAGTGGAGGTGACTGTGTGTTCATaGCTCTCTCTTGCTCTCTCACCATTATACCTGGATGGCTGCTGG +
Preference number: 1 (lower is better)
Translates to: TLGLKEWGVEVTVCS*LSLALSPLYLDGCW
Trigger: CCAGCAGCCATCCAGGTATAATGGTGAGAGAGCAAGAGAGAGGCATGAACACACAGTCACCTCCACTCCCCATTCTTTCAACCCAAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 90 bp ACCAGGGAGCTGTCCTGGGTGGTTGCATCCTTCATTTTCTGTCCATaGCCTCATAGGGCCTCAGGGAAACTGCTAGATTTAGGTGAAGAG +
Preference number: 1 (lower is better)
Translates to: TRELSWVVASFIFCP*PHRASGKLLDLGEE
Trigger: CTCTTCACCTAAATCTAGCAGTTTCCCTGAGGCCCTATGAGGGCATGGACAGAAAATGAAGGATGCAACCACCCAGGACAGCTCCCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 90 bp TTGGAACTGAGGGTTGACCTCAGCAGAGAGTCTCCTGTTGACCCTTaGGTTGAAAGAATGGGGAGTGGAGGTGACTGTGTGTTCATGCCT +
Preference number: 1 (lower is better)
Translates to: LELRVDLSRESPVDP*VERMGSGGDCVFMP
Trigger: AGGCATGAACACACAGTCACCTCCACTCCCCATTCTTTCAACCCAAGGGTCAACAGGAGACTCTCTGCTGAGGTCAACCCTCAGTTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 90 bp GTTCGGGGGTCAGGGAAAAACAGGAAAGTATATCCCTTCAAGATCTaGTATGCCCTCCCATCTAAGTCCAGATGGGAGAGGGCAAACTGC +
Preference number: 1 (lower is better)
Translates to: VRGSGKNRKVYPFKI*YALPSKSRWERANC
Trigger: GCAGTTTGCCCTCTCCCATCTGGACTTAGATGGGAGGGCATAGCAGATCTTGAAGGGATATACTTTCCTGTTTTTCCCTGACCCCCGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 90 bp ACATTCTGGAAGCCATTGCTAATAGTCCCGATGCTAGATTCTGTCTaGGGGCTTTGTGGGTATCTGGAAAGGTGGGGCGCAGCTTCTTTG +
Preference number: 1 (lower is better)
Translates to: TFWKPLLIVPMLDSV*GLCGYLERWGAASL
Trigger: CAAAGAAGCTGCGCCCCACCTTTCCAGATACCCACAAAGCCCCCAGACAGAATCTAGCATCGGGACTATTAGCAATGGCTTCCAGAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 90 bp ACTAGTTTGAAAGCCAACCCATCACACCTGAGGAAAAGAGATGGGTaGGTCTATGCCCGGCATGGGGGTTGTGCTCAACTGATGAACTAC +
Preference number: 1 (lower is better)
Translates to: TSLKANPSHLRKRDG*VYARHGGCAQLMNY
Trigger: GTAGTTCATCAGTTGAGCACAACCCCCATGCCGGGCATAGACTCACCCATCTCTTTTCCTCAGGTGTGATGGGTTGGCTTTCAAACTAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 90 bp GAAAGAATGGGGAGTGGAGGTGACTGTGTGTTCATGCCTCTCTCTTaGTCTCTCACCATTATACCTGGATGGCTGCTGGAATTCCGAGAT +
Preference number: 1 (lower is better)
Translates to: ERMGSGGDCVFMPLS*SLTIIPGWLLEFRD
Trigger: ATCTCGGAATTCCAGCAGCCATCCAGGTATAATGGTGAGAGAGCAAGAGAGAGGCATGAACACACAGTCACCTCCACTCCCCATTCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 90 bp ATGCACAAGGACCTTAACTTACAAAGGTCATCCGGCATAGAGACGTaGTGGGTCTCCATGACTCCAGATGGCTGGGTGTGGGTATCAAAA +
Preference number: 1 (lower is better)
Translates to: MHKDLNLQRSSGIET*WVSMTPDGWVWVSK
Trigger: TTTTGATACCCACACCCAGCCATCTGGAGTCATGGAGACCCACCACGTCTCTATGCCGGATGACCTTTGTAAGTTAAGGTCCTTGTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 90 bp GTATATCCCTTCAAGATCTGCTATGCCCTCCCATCTAAGTCCAGATaGGAGAGGGCAAACTGCCCAGGGCAGAGATTAAGGATGAAGTTG +
Preference number: 1 (lower is better)
Translates to: VYPFKICYALPSKSR*ERANCPGQRLRMKL
Trigger: CAACTTCATCCTTAATCTCTGCCCTGGGCAGTTTGCCCTCTCCCATCTGGACTTAGATGGGAGGGCATAGCAGATCTTGAAGGGATATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 90 bp CCAGACAAAAAGGCAGAGATACCACCCAGATTCTTTAAGGGTAATTaGCTCTCCCAGCAGGATACAGATGCAGAGAGTCAGGTTGCACTC +
Preference number: 1 (lower is better)
Translates to: PDKKAEIPPRFFKGN*LSQQDTDAESQVAL
Trigger: GAGTGCAACCTGACTCTCTGCATCTGTATCCTGCTGGGAGAGGCAATTACCCTTAAAGAATCTGGGTGGTATCTCTGCCTTTTTGTCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 90 bp TTTCAGATAGATTCTCCCCTTCTGGGGCAGTTGAGCAATCAGGTGTaGAGGGAAGATGGCTATGGTAAGGCCTTTAGGTTACGGACTCTT +
Preference number: 1 (lower is better)
Translates to: FQIDSPLLGQLSNQV*REDGYGKAFRLRTL
Trigger: AAGAGTCCGTAACCTAAAGGCCTTACCATAGCCATCTTCCCTCCACACCTGATTGCTCAACTGCCCCAGAAGGGGAGAATCTATCTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 90 bp ATGGGTCAAAGCTTTCTGAGGTCTCACCAGAAGCCAAGCAGATGTTaGTACCTTGCTCAAACAGCCTGCAGAACTGCGAGCCAAATAAAC +
Preference number: 1 (lower is better)
Translates to: MGQSFLRSHQKPSRC*YLAQTACRTASQIN
Trigger: GTTTATTTGGCTCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGTGAGACCTCAGAAAGCTTTGACCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 90 bp CTTATTCTGGATATGAGAGCTGCCAAGCTCCAATCGTCCTGGCCATaGTCAATCCCCAGCTGTGCTTCTATTTACACCCAACATATTGGG +
Preference number: 1 (lower is better)
Translates to: LILDMRAAKLQSSWP*SIPSCASIYTQHIG
Trigger: CCCAATATGTTGGGTGTAAATAGAAGCACAGCTGGGGATTGATCATGGCCAGGACGATTGGAGCTTGGCAGCTCTCATATCCAGAATAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 90 bp GATTTGAGGTCTTTTAAGACAGATGTTCTTCAGGGGTTGCAGCTCTaGAGACCTCCTGGTTATACAACCAGGATGTGTGACGTGCTGAAG +
Preference number: 1 (lower is better)
Translates to: DLRSFKTDVLQGLQL*RPPGYTTRMCDVLK
Trigger: CTTCAGCACGTCACACATCCTGGTTGTATAACCAGGAGGTCTGCAGAGCTGCAACCCCTGAAGAACATCTGTCTTAAAAGACCTCAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 90 bp AGCTCTGCAGACCTCCTGGTTATACAACCAGGATGTGTGACGTGCTaGAGTCTAAAAGTTTCATCTCAGTTCATCTGTACCATCACGGTG +
Preference number: 1 (lower is better)
Translates to: SSADLLVIQPGCVTC*SLKVSSQFICTITV
Trigger: CACCGTGATGGTACAGATGAACTGAGATGAAACTTTTAGACTTCAGCACGTCACACATCCTGGTTGTATAACCAGGAGGTCTGCAGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 90 bp CTTGTGTTCAAAAAGGAGCTCCCAGTTCCTAGTGCAATTCATGGGTaGAATCCAGACCCTCTCAGTAGGGAGCATTCACTCCATCTTGTT +
Preference number: 1 (lower is better)
Translates to: LVFKKELPVPSAIHG*NPDPLSREHSLHLV
Trigger: AACAAGATGGAGTGAATGCTCCCTACTGAGAGGGTCTGGATTTCACCCATGAATTGCACTAGGAACTGGGAGCTCCTTTTTGAACACAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 90 bp AAGCTTTCTGAGGTCTCACCAGAAGCCAAGCAGATGTTGATACCTTaGTCAAACAGCCTGCAGAACTGCGAGCCAAATAAACCTCTTTTC +
Preference number: 1 (lower is better)
Translates to: KLSEVSPEAKQMLIP*SNSLQNCEPNKPLF
Trigger: GAAAAGAGGTTTATTTGGCTCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGTGAGACCTCAGAAAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 90 bp ACAGACAGCGGACACCAAAAGAGAGACTTTATCACAACTGCCTCTTaGGACTTGTGTTCAAAAAGGAGCTCCCAGTTCCTAGTGCAATTC +
Preference number: 1 (lower is better)
Translates to: TDSGHQKRDFITTAS*DLCSKRSSQFLVQF
Trigger: GAATTGCACTAGGAACTGGGAGCTCCTTTTTGAACACAAGTCCCAAGAGGCAGTTGTGATAAAGTCTCTCTTTTGGTGTCCGCTGTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 90 bp AGCATCTCTTCTTGGAATCTGCCATTGTTTCCTCCAACTTTCTCCTaGATTCTGATTCACATGACCTTTGGGGAGGTGACTGACTCCCTT +
Preference number: 1 (lower is better)
Translates to: SISSWNLPLFPPTFS*ILIHMTFGEVTDSL
Trigger: AAGGGAGTCAGTCACCTCCCCAAAGGTCATGTGAATCAGAATTCAGGAGAAAGTTGGAGGAAACAATGGCAGATTCCAAGAAGAGATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 90 bp AGACCACACCTAAACCTCAGTTCACCAAAGTTCACGTGTTTGGCTTaGAGGAGTGTGCTCAACAGGCAAACCGATACTTTTAAAGATTGG +
Preference number: 1 (lower is better)
Translates to: RPHLNLSSPKFTCLA*RSVLNRQTDTFKDW
Trigger: CCAATCTTTAAAAGTATCGGTTTGCCTGTTGAGCACACTCCTGCAAGCCAAACACGTGAACTTTGGTGAACTGAGGTTTAGGTGTGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 90 bp TCTCCCAGCAGGATACAGATGCAGAGAGTCAGGTTGCACTCAGGCTaGATTGGAGTGTTCTTTAAGAAAATGTTCCCTATTTTTGTGTGC +
Preference number: 1 (lower is better)
Translates to: SPSRIQMQRVRLHSG*IGVFFKKMFPIFVC
Trigger: GCACACAAAAATAGGGAACATTTTCTTAAAGAACACTCCAATTCAGCCTGAGTGCAACCTGACTCTCTGCATCTGTATCCTGCTGGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 90 bp TTCATTTACAGACAGCGGACACCAAAAGAGAGACTTTATCACAACTaGCTCTTGGGACTTGTGTTCAAAAAGGAGCTCCCAGTTCCTAGT +
Preference number: 1 (lower is better)
Translates to: FIYRQRTPKERLYHN*LLGLVFKKELPVPS
Trigger: ACTAGGAACTGGGAGCTCCTTTTTGAACACAAGTCCCAAGAGGCAGTTGTGATAAAGTCTCTCTTTTGGTGTCCGCTGTCTGTAAATGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 90 bp AACTTTCTCCTGAATTCTGATTCACATGACCTTTGGGGAGGTGACTaGCTCCCTTTATTTTCACACTTGCCAAGACAGACAGAAAGCTCA +
Preference number: 1 (lower is better)
Translates to: NFLLNSDSHDLWGGD*LPLFSHLPRQTESS
Trigger: TGAGCTTTCTGTCTGTCTTGGCAAGTGTGAAAATAAAGGGAGTCAGTCACCTCCCCAAAGGTCATGTGAATCAGAATTCAGGAGAAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 90 bp TGTTCATGCCTCTCTCTTGCTCTCTCACCATTATACCTGGATGGCTaGTGGAATTCCGAGATGAAGATGAAGTTTTTCTCTAGAGTTATG +
Preference number: 1 (lower is better)
Translates to: CSCLSLALSPLYLDG*WNSEMKMKFFSRVM
Trigger: CATAACTCTAGAGAAAAACTTCATCTTCATCTCGGAATTCCAGCAGCCATCCAGGTATAATGGTGAGAGAGCAAGAGAGAGGCATGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 90 bp TCTTCTATCCCACTGGAAAATTCCAGCCTCTGCATCCTTTCCACTTaGACAATAACTTCTAACAGTGCGAGAAACACTAGTTTGAAAGCC +
Preference number: 1 (lower is better)
Translates to: SSIPLENSSLCILST*TITSNSARNTSLKA
Trigger: GGCTTTCAAACTAGTGTTTCTCGCACTGTTAGAAGTTATTGTCCAAGTGGAAAGGATGCAGAGGCTGGAATTTTCCAGTGGGATAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 90 bp CTTGGAGACGTTTTGAACAGTATTGTCATGTCTCTCGAGACCCTATaGAGAGTCCCAAATGAATATGAAGGAGAAACCACAGCTGTCAAA +
Preference number: 1 (lower is better)
Translates to: LGDVLNSIVMSLETL*RVPNEYEGETTAVK
Trigger: TTTGACAGCTGTGGTTTCTCCTTCATATTCATTTGGGACTCTTCATAGGGTCTCGAGAGACATGACAATACTGTTCAAAACGTCTCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 90 bp GCTTGCAGGAGTGTGCTCAACAGGCAAACCGATACTTTTAAAGATTaGAGGCTTAATATCTTGTTTGCCTTCCAAGATGATATTTCTGTC +
Preference number: 1 (lower is better)
Translates to: ACRSVLNRQTDTFKD*RLNILFAFQDDISV
Trigger: GACAGAAATATCATCTTGGAAGGCAAACAAGATATTAAGCCTCCAATCTTTAAAAGTATCGGTTTGCCTGTTGAGCACACTCCTGCAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 90 bp TCACTTAATAGCAGAAATCATCAACTAATACTGAATGAGAGAAAATaGGATGCTAATGAGGTAAATGGGAAGATGGTGATTGATGAGTTC +
Preference number: 1 (lower is better)
Translates to: SLNSRNHQLILNERK*DANEVNGKMVIDEF
Trigger: GAACTCATCAATCACCATCTTCCCATTTACCTCATTAGCATCCCATTTTCTCTCATTCAGTATTAGTTGATGATTTCTGCTATTAAGTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGGGTGAGGGGTGCAGCTaGAGACCGCCAGGGCTGCAC +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWGEGCS*RPPGLH
Trigger: GTGCAGCCCTGGCGGTCTTCAGCTGCACCCCTCACC...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 90 bp GCAGGCAGCAGGGCAGGTAAGGGGGAAAGGCAGGTTGCTGCCTCCTaGGTCTGGCCTTGCTGGGCTGAACTCCAGGAAGTTTTGCAGAGG +
Preference number: 2 (lower is better)
Translates to: AGSRAGKGERQVAAS*VWPCWAELQEVLQR
Trigger: CCTCTGCAAAACTTCCTGGAGTTCAGCCCAGCAAGGCCAGACCAAGGAGGCAGCAACCTGCCTTTCCCCCTTACCTGCCCTGCTGCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGGGGGCGCAGCTTCTTTaGGGATCAAGGGGGTCAGGG +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWGAQLL*GSRGSG
Trigger: CCCTGACCCCCTTGATCCCCAAAGAAGCTGCGCCCC...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 90 bp CACACGTGGCCAGGCCAGCCCAAACCAGGGAGCTGTCCTGGGTGGTaGCATCCTTCATTTTCTGTCCATGCCCTCATAGGGCCTCAGGGA +
Preference number: 2 (lower is better)
Translates to: HTWPGQPKPGSCPGW*HPSFSVHALIGPQG
Trigger: TCCCTGAGGCCCTATGAGGGCATGGACAGAAAATGAAGGATGCAACCACCCAGGACAGCTCCCTGGTTTGGGCTGGCCTGGCCACGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGACATGCGCGGTGAGCTaGAACACAGTGTGGCTGGCG +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWTCAVS*NTVWLA
Trigger: CGCCAGCCACACTGTGTTGCAGCTCACCGCGCATGT...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTTCTGCCCGCACGGCATaGACATGCGCGGTGAGCTGC +
Preference number: 2 (lower is better)
Translates to: ESCSLSRKQDGGASPELLSARTA*TCAVSC
Trigger: GCAGCTCACCGCGCATGTGCATGCCGTGCGGGCAGA...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGTCCCTGGGTGCCACATaGGGGGTTACCACAGTGGGA +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWSLGAT*GVTTVG
Trigger: TCCCACTGTGGTAACCCCCCATGTGGCACCCAGGGA...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGGTTGATCTCCAGTGCTaGAGGTGGGGCCTGCTGGGA +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWVDLQC*RWGLLG
Trigger: TCCCAGCAGGCCCCACCTCCAGCACTGGAGATCAAC...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATCATGCACATGCGCGGTaGGCTGCAACACAGTGTGGC +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHHAHAR*AATQCG
Trigger: GCCACACTGTGTTGCAGCTCACCGCGCATGTGCATG...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGGGTGAGGGGTGCAGCTaGAGACCGCCAGGGCTGCAC +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEGEGCS*RPPGLH
Trigger: GTGCAGCCCTGGCGGTCTTCAGCTGCACCCCTCACC...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCAGTGCCGACGGAAACTaGGAGCACCCCAGCTCTACC +
Preference number: 2 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSSADGN*EHPSST
Trigger: GGTAGAGCTGGGGTGCTCTCAGTTTCCGTCGGCACT...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATCGTGGTGGGTCTCCATaGCTCCAGATGGCTGGGTGT +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHRGGSP*LQMAGC
Trigger: ACACCCAGCCATCTGGAGTCATGGAGACCCACCACG...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATTCGTGTGGATCAGACTaGTGGGCAGCCCCATGGCAC +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHSCGSD*WAAPWH
Trigger: GTGCCATGGGGCTGCCCATCAGTCTGATCCACACGA...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATACATGCGCGGTGAGCTaGAACACAGTGTGGCTGGCG +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHTCAVS*NTVWLA
Trigger: CGCCAGCCACACTGTGTTGCAGCTCACCGCGCATGT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGGCTGGAGGTGGGGCCTaGTGGGAGATATTTGGGTCA +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWAGGGA*WEIFGS
Trigger: TGACCCAAATATCTCCCAGCAGGCCCCACCTCCAGC...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGGATCCCCCAGGCTCTTaGGAGCTTACATCTGCTCCC +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWDPPGS*ELTSAP
Trigger: GGGAGCAGATGTAAGCTCCCAAGAGCCTGGGGGATC...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCCCCTATGGATGTGGTTaGGTGGTTCGGGGGTCAGGG +
Preference number: 2 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSPYGCG*VVRGSG
Trigger: CCCTGACCCCCGAACCACCCAACCACATCCATAGGG...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATTCCCTGGGTGCCACATaGGGGGTTACCACAGTGGGA +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHSLGAT*GVTTVG
Trigger: TCCCACTGTGGTAACCCCCCATGTGGCACCCAGGGA...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATGGCATCCCTTGGGCATaGGAGACCAGGACCTTCTGG +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHGIPWA*ETRTFW
Trigger: CCAGAAGGTCCTGGTCTCCCATGCCCAAGGGATGCC...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGCTACATGGCATCCCTTaGGCATGGGAGACCAGGACC +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWLHGIP*AWETRT
Trigger: GGTCCTGGTCTCCCATGCCCAAGGGATGCCATGTAG...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 90 bp CAATTCCTGCGGAAGTCACTTCCAGCTGGGGCTACATGGCATCCCTaGGGCATGGGAGACCAGGACCTTCTGGAATCTTCAGCCGTGAGC +
Preference number: 2 (lower is better)
Translates to: QFLRKSLPAGATWHP*GMGDQDLLESSAVS
Trigger: GCTCACGGCTGAAGATTCCAGAAGGTCCTGGTCTCCCATGCCCAAGGGATGCCATGTAGCCCCAGCTGGAAGTGACTTCCGCAGGAATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGCATGCACATGCGCGGTaGGCTGCAACACAGTGTGGC +
Preference number: 2 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKHAHAR*AATQCG
Trigger: GCCACACTGTGTTGCAGCTCACCGCGCATGTGCATG...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGCTTGGAACTGAGGGTTaGCCTCAGCAGAGAGTCTCC +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWLGTEG*PQQRVS
Trigger: GGAGACTCTCTGCTGAGGTCAACCCTCAGTTCCAAG...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTCGTGGTGGGTCTCCATaGCTCCAGATGGCTGGGTGT +
Preference number: 2 (lower is better)
Translates to: ESCSLSRKQDGGASPELLRGGSP*LQMAGC
Trigger: ACACCCAGCCATCTGGAGTCATGGAGACCCACCACG...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCGTCCGGAGGACAGAATaGGGGGTGAGCTATTCCCTC +
Preference number: 2 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSVRRTE*GVSYSL
Trigger: GAGGGAATAGCTCACCCCTCATTCTGTCCTCCGGAC...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATGTCCGGAGGACAGAATaGGGGGTGAGCTATTCCCTC +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHVRRTE*GVSYSL
Trigger: GAGGGAATAGCTCACCCCTCATTCTGTCCTCCGGAC...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTTCTGCCCGCACGGCATaGACATGCGCGGTGAGCTGC +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCSARTA*TCAVSC
Trigger: GCAGCTCACCGCGCATGTGCATGCCGTGCGGGCAGA...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATGGAAAGGCAGGTTGCTaGCTCCTTGGTCTGGCCTTG +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHGKAGC*LLGLAL
Trigger: CAAGGCCAGACCAAGGAGGCAGCAACCTGCCTTTCC...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTTGGGGAGGGTGGGCTTaGTTCCAGGTCACTGGGAGC +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSWGGWA*FQVTGS
Trigger: GCTCCCAGTGACCTGGAAGCAAGCCCACCCTCCCCA...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATTCCGTGTCTGCTGTGTaGAGGAAGAGTCTGCCCGCA +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHSVSAV*RKSLPA
Trigger: TGCGGGCAGACTCTTCCTCCACACAGCAGACACGGA...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGCCAGATGGCTGGGTGTaGGTATCAAAACCTCACCGC +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWPDGWV*VSKPHR
Trigger: GCGGTGAGGTTTTGATACCCACACCCAGCCATCTGG...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATGATCCCCCAGGCTCTTaGGAGCTTACATCTGCTCCC +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHDPPGS*ELTSAP
Trigger: GGGAGCAGATGTAAGCTCCCAAGAGCCTGGGGGATC...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATGGTCCTGCACCCCTATaGATGTGGTTGGGTGGTTCG +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHGPAPL*MWLGGS
Trigger: CGAACCACCCAACCACATCCATAGGGGTGCAGGACC...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATGGCAGCCAAGGTCACTaGTTCCTAAGTCCGGAGGAC +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHGSQGH*FLSPED
Trigger: GTCCTCCGGACTTAGGAACCAGTGACCTTGGCTGCC...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATGGGTATCTGGAAAGGTaGGGCGCAGCTTCTTTGGGG +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHGYLER*GAASLG
Trigger: CCCCAAAGAAGCTGCGCCCCACCTTTCCAGATACCC...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCGGGTATCTGGAAAGGTaGGGCGCAGCTTCTTTGGGG +
Preference number: 2 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSGYLER*GAASLG
Trigger: CCCCAAAGAAGCTGCGCCCCACCTTTCCAGATACCC...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGCCTTGGGTTCTTTACTaGACGGTTCCATCGTCCGCA +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWPWVLY*TVPSSA
Trigger: TGCGGACGATGGAACCGTTCAGTAAAGAACCCAAGG...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGCTTCTGTGGCAACCCTaGAGTCAGCCTCTTGGAACT +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWLLWQP*SQPLGT
Trigger: AGTTCCAAGAGGCTGACTTCAGGGTTGCCACAGAAG...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTCGTGGTGGGTCTCCATaGCTCCAGATGGCTGGGTGT +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSRGGSP*LQMAGC
Trigger: ACACCCAGCCATCTGGAGTCATGGAGACCCACCACG...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATAGGAAAAGAGATGGGTaGGTCTATGCCCGGCATGGG +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHRKRDG*VYARHG
Trigger: CCCATGCCGGGCATAGACTCACCCATCTCTTTTCCT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTACATGCGCGGTGAGCTaGAACACAGTGTGGCTGGCG +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSTCAVS*NTVWLA
Trigger: CGCCAGCCACACTGTGTTGCAGCTCACCGCGCATGT...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTTGTGGAGGAAGAGTCTaGCCGCACGGCATGCACATG +
Preference number: 2 (lower is better)
Translates to: ESCSLSRKQDGGASPELLCGGRV*PHGMHM
Trigger: CATGTGCATGCCGTGCGGGCAGACTCTTCCTCCACA...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATCTGCAGGTTCCAAAATaGTGGTGCGGGATGGGCTCT +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHLQVPK*WCGMGS
Trigger: AGAGCCCATCCCGCACCAGCATTTTGGAACCTGCAG...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTAACCTGCCTCACCCCTaGCCCAAAGAAGCAGGGATG +
Preference number: 2 (lower is better)
Translates to: ESCSLSRKQDGGASPELLNLPHP*PKEAGM
Trigger: CATCCCTGCTTCTTTGGGGCAGGGGTGAGGCAGGTT...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATTCCTTGGTCTGGCCTTaGTGGGCTGAACTCCAGGAA +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHSLVWP*WAELQE
Trigger: TTCCTGGAGTTCAGCCCAGCAAGGCCAGACCAAGGA...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTGGAAAGGCAGGTTGCTaGCTCCTTGGTCTGGCCTTG +
Preference number: 2 (lower is better)
Translates to: ESCSLSRKQDGGASPELLGKAGC*LLGLAL
Trigger: CAAGGCCAGACCAAGGAGGCAGCAACCTGCCTTTCC...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTTGGGGAGGGTGGGCTTaGTTCCAGGTCACTGGGAGC +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCWGGWA*FQVTGS
Trigger: GCTCCCAGTGACCTGGAAGCAAGCCCACCCTCCCCA...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTGGGCTGGGAGTTGGCTaGCTGACAAGGAAGGCTTCC +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSGLGVG*LTRKAS
Trigger: GGAAGCCTTCCTTGTCAGGCAGCCAACTCCCAGCCC...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGATGTTCTTCAGGGGTTaGAGCTCTGCAGACCTCCTG +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWMFFRG*SSADLL
Trigger: CAGGAGGTCTGCAGAGCTGCAACCCCTGAAGAACAT...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATTCTTGCTGTGTGACGTaGCTGCTCCCCCTTCACCTT +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHSCCVT*LLPLHL
Trigger: AAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGA...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGTCTTGCTCCTGTTCTTaGTGTGTGACGTGCCTGCTC +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWSCSCS*CVTCLL
Trigger: GAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGA...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCTCCGGCATAGAGACGTaGTGGGTCTCCATGACTCCA +
Preference number: 2 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSSGIET*WVSMTP
Trigger: TGGAGTCATGGAGACCCACCACGTCTCTATGCCGGA...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATTCCGGCATAGAGACGTaGTGGGTCTCCATGACTCCA +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHSGIET*WVSMTP
Trigger: TGGAGTCATGGAGACCCACCACGTCTCTATGCCGGA...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCCAAGAAAGCTTCTGGTaGCTCGCTACTGGAAGGGGG +
Preference number: 2 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSQESFW*LATGRG
Trigger: CCCCCTTCCAGTAGCGAGCCACCAGAAGCTTTCTTG...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTGATCCCCCAGGCTCTTaGGAGCTTACATCTGCTCCC +
Preference number: 2 (lower is better)
Translates to: ESCSLSRKQDGGASPELLDPPGS*ELTSAP
Trigger: GGGAGCAGATGTAAGCTCCCAAGAGCCTGGGGGATC...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGGGGCGCAGCTTCTTTaGGGATCAAGGGGGTCAGGG +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCGAQLL*GSRGSG
Trigger: CCCTGACCCCCTTGATCCCCAAAGAAGCTGCGCCCC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGCAGGGTAGGGGCAGGTaGCCGGGCAAGCTTTTCCAC +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEQGRGR*PGKLFH
Trigger: GTGGAAAAGCTTGCCCGGCCACCTGCCCCTACCCTG...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 90 bp AGAAAAGGAGACTGGCACCTCTTCTCCTCTCTCTTGCTCCTGTTCTaGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCACCATGGGT +
Preference number: 2 (lower is better)
Translates to: RKGDWHLFSSLLLLF*LCDVPAPPSPSTMG
Trigger: ACCCATGGTGGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGAGGAGAAGAGGTGCCAGTCTCCTTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTCATGCACATGCGCGGTaGGCTGCAACACAGTGTGGC +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCHAHAR*AATQCG
Trigger: GCCACACTGTGTTGCAGCTCACCGCGCATGTGCATG...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTCTTGGAACTGAGGGTTaGCCTCAGCAGAGAGTCTCC +
Preference number: 2 (lower is better)
Translates to: ESCSLSRKQDGGASPELLLGTEG*PQQRVS
Trigger: GGAGACTCTCTGCTGAGGTCAACCCTCAGTTCCAAG...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATCTTCTGTGGCAACCCTaGAGTCAGCCTCTTGGAACT +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHLLWQP*SQPLGT
Trigger: AGTTCCAAGAGGCTGACTTCAGGGTTGCCACAGAAG...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTCTGGCCTTGCTGGGCTaGACTCCAGGAAGTTTTGCA +
Preference number: 2 (lower is better)
Translates to: ESCSLSRKQDGGASPELLLALLG*TPGSFA
Trigger: TGCAAAACTTCCTGGAGTTCAGCCCAGCAAGGCCAG...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGTCTGTACCATCACGGTaGTATAGGAAAAGGGGCCCT +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWSVPSR*YRKRGP
Trigger: AGGGCCCCTTTTCCTATATCACCGTGATGGTACAGA...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGCCCTTCTGGGGCAGTTaGGCAATCAGGTGTGGAGGG +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEPFWGS*AIRCGG
Trigger: CCCTCCACACCTGATTGCTCAACTGCCCCAGAAGGG...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATACTCCTGATCTTAAGTaGTCCACCTGCCTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHTPDLK*STCLGL
Trigger: GAGGCCAAGGCAGGTGGATCACTTAAGATCAGGAGT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATCCAACCCATCACACCTaGGGAAAAGAGATGGGTGAG +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHPTHHT*GKEMGE
Trigger: CTCACCCATCTCTTTTCCTCAGGTGTGATGGGTTGG...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGAACTCCAGGAAGTTTTaGAGAGGGACCTGTGATCCC +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWNSRKF*RGTCDP
Trigger: GGGATCACAGGTCCCTCTGCAAAACTTCCTGGAGTT...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAGGGGGAAAGGCAGGTTaGTGCCTCCTTGGTCTGGCC +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRGGKAG*CLLGLA
Trigger: GGCCAGACCAAGGAGGCAGCAACCTGCCTTTCCCCC...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGGGCTGGGAGTTGGCTaGCTGACAAGGAAGGCTTCC +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCGLGVG*LTRKAS
Trigger: GGAAGCCTTCCTTGTCAGGCAGCCAACTCCCAGCCC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGTGCAGAGAGTCAGGTTaGACTCAGGCTGAATTGGAG +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWCRESG*TQAELE
Trigger: CTCCAATTCAGCCTGAGTGCAACCTGACTCTCTGCA...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGCCAGCAGGATACAGATaGAGAGAGTCAGGTTGCACT +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWPAGYR*RESGCT
Trigger: AGTGCAACCTGACTCTCTGCATCTGTATCCTGCTGG...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGGCTGTCCTGGGTGGTTaGATCCTTCATTTTCTGTCC +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWAVLGG*ILHFLS
Trigger: GGACAGAAAATGAAGGATGCAACCACCCAGGACAGC...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTCATGTTGATCTCCAGTaGTGGAGGTGGGGCCTGCTG +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSHVDLQ*WRWGLL
Trigger: CAGCAGGCCCCACCTCCAGCACTGGAGATCAACATG...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGCTTGGGTTGAAAGAATaGGGAGTGGAGGTGACTGTG +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWLGLKE*GVEVTV
Trigger: CACAGTCACCTCCACTCCCCATTCTTTCAACCCAAG...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATAATGCTGGTGCGGGATaGGCTCTAGGAACAGAAAGC +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHNAGAG*ALGTES
Trigger: GCTTTCTGTTCCTAGAGCCCATCCCGCACCAGCATT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGCTCCATGACTCCAGATaGCTGGGTGTGGGTATCAAA +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWLHDSR*LGVGIK
Trigger: TTTGATACCCACACCCAGCCATCTGGAGTCATGGAG...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATTTGGTCTGGCCTTGCTaGGCTGAACTCCAGGAAGTT +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHLVWPC*AELQEV
Trigger: AACTTCCTGGAGTTCAGCCCAGCAAGGCCAGACCAA...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCCCATCTAAGTCCAGATaGGAGAGGGCAAACTGCCCA +
Preference number: 2 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSPSKSR*ERANCP
Trigger: TGGGCAGTTTGCCCTCTCCCATCTGGACTTAGATGG...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTCCCTATGGATGTGGTTaGGTGGTTCGGGGGTCAGGG +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCPYGCG*VVRGSG
Trigger: CCCTGACCCCCGAACCACCCAACCACATCCATAGGG...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGTTGCTTCCAGGTCACTaGGAGCAAGAAGAAGGTCAC +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWLLPGH*EQEEGH
Trigger: GTGACCTTCTTCTTGCTCCCAGTGACCTGGAAGCAA...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTAACAGGGCTGGGAGTTaGCTGCCTGACAAGGAAGGC +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSNRAGS*LPDKEG
Trigger: GCCTTCCTTGTCAGGCAGCCAACTCCCAGCCCTGTT...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTCAGCCTCCACACAGTTaGGCAGCCAAGGTCACTGGT +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSQPPHS*AAKVTG
Trigger: ACCAGTGACCTTGGCTGCCCAACTGTGTGGAGGCTG...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTGGGTATCTGGAAAGGTaGGGCGCAGCTTCTTTGGGG +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSGYLER*GAASLG
Trigger: CCCCAAAGAAGCTGCGCCCCACCTTTCCAGATACCC...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATGTCAGATCAGTCACGTaGGACCCAAGCACATTCTGG +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHVRSVT*DPSTFW
Trigger: CCAGAATGTGCTTGGGTCCCACGTGACTGATCTGAC...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATGGACTCTTAGCTCCATaGGGATCACTGAAGAGGCCA +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHGLLAP*GSLKRP
Trigger: TGGCCTCTTCAGTGATCCCCATGGAGCTAAGAGTCC...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGGTGAGCCACCGCACCTaGTCCTTAATGCTTCTTTTC +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWVSHRT*SLMLLF
Trigger: GAAAAGAAGCATTAAGGACCAGGTGCGGTGGCTCAC...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGCATCCTCCCAGGAATaGCGAGCTACCAGCCTGCTC +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCASSQE*RATSLL
Trigger: GAGCAGGCTGGTAGCTCGCCATTCCTGGGAGGATGC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 90 bp TGCGGGTTGTTAAGAAAAGGAGACTGGCACCTCTTCTCCTCTCTCTaGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCT +
Preference number: 2 (lower is better)
Translates to: CGLLRKGDWHLFSSL*LLFLLCDVPAPPSP
Trigger: AGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGAGGAGAAGAGGTGCCAGTCTCCTTTTCTTAACAACCCGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGACATGCACATGCGCGGTaGGCTGCAACACAGTGTGGC +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRHAHAR*AATQCG
Trigger: GCCACACTGTGTTGCAGCTCACCGCGCATGTGCATG...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTCTTCTGTGGCAACCCTaGAGTCAGCCTCTTGGAACT +
Preference number: 2 (lower is better)
Translates to: ESCSLSRKQDGGASPELLLLWQP*SQPLGT
Trigger: AGTTCCAAGAGGCTGACTTCAGGGTTGCCACAGAAG...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGGTGAGGGGTGCAGCTaGAGACCGCCAGGGCTGCAC +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGGEGCS*RPPGLH
Trigger: GTGCAGCCCTGGCGGTCTTCAGCTGCACCCCTCACC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAAGTGCCGACGGAAACTaGGAGCACCCCAGCTCTACC +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRSADGN*EHPSST
Trigger: GGTAGAGCTGGGGTGCTCTCAGTTTCCGTCGGCACT...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTTGGGAGTTGGCTGCCTaGCAAGGAAGGCTTCCCTAT +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSWELAA*QGRLPY
Trigger: ATAGGGAAGCCTTCCTTGTCAGGCAGCCAACTCCCA...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGAGCATAAAATTTGTGTaGACAGGGCTGGGAGTTGGC +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWSIKFV*TGLGVG
Trigger: GCCAACTCCCAGCCCTGTTCACACAAATTTTATGCT...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCGGACAGAATGAGGGGTaGGCTATTCCCTCTCAATTC +
Preference number: 2 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSGQNEG*AIPSQF
Trigger: GAATTGAGAGGGAATAGCTCACCCCTCATTCTGTCC...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGGTCCGGAGGACAGAATaGGGGGTGAGCTATTCCCTC +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEVRRTE*GVSYSL
Trigger: GAGGGAATAGCTCACCCCTCATTCTGTCCTCCGGAC...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGCGCTTTATGATTCTATaGATGGGAAGTTGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWRFMIL*MGSWEG
Trigger: CCCCTCCCAACTTCCCATTCATAGAATCATAAAGCG...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGACGCACGGCATGCACATaGGCGGTGAGCTGCAACACA +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRRTACT*AVSCNT
Trigger: TGTGTTGCAGCTCACCGCGCATGTGCATGCCGTGCG...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTCTGCAGGTTCCAAAATaGTGGTGCGGGATGGGCTCT +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSLQVPK*WCGMGS
Trigger: AGAGCCCATCCCGCACCAGCATTTTGGAACCTGCAG...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATGGGAGAAAGGCTCTCTaGAGGTTCCAAAATGCTGGT +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHGRKAL*RFQNAG
Trigger: ACCAGCATTTTGGAACCTGCAGAGAGCCTTTCTCCC...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCGAAAGTTTCTACAGCTaGCCTCAGGCTGTTGCCAGT +
Preference number: 2 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSESFYS*PQAVAS
Trigger: ACTGGCAACAGCCTGAGGGCAGCTGTAGAAACTTTC...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTTCCTTGGTCTGGCCTTaGTGGGCTGAACTCCAGGAA +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSSLVWP*WAELQE
Trigger: TTCCTGGAGTTCAGCCCAGCAAGGCCAGACCAAGGA...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATGTCTACTTAGGGTCCTaGACCCCTATGGATGTGGTT +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHVYLGS*TPMDVV
Trigger: AACCACATCCATAGGGGTGCAGGACCCTAAGTAGAC...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCGTCTACTTAGGGTCCTaGACCCCTATGGATGTGGTT +
Preference number: 2 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSVYLGS*TPMDVV
Trigger: AACCACATCCATAGGGGTGCAGGACCCTAAGTAGAC...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGTTTCCTCCCTACTCCTaGACAGTGGCTAATCTCTCT +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWFPPYS*TVANLS
Trigger: AGAGAGATTAGCCACTGTGCAGGAGTAGGGAGGAAA...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCCCAGCAGGATACAGATaGAGAGAGTCAGGTTGCACT +
Preference number: 2 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSPAGYR*RESGCT
Trigger: AGTGCAACCTGACTCTCTGCATCTGTATCCTGCTGG...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCTTCACGTGTTTGGCTTaGAGGAGTGTGCTCAACAGG +
Preference number: 2 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSFTCLA*RSVLNR
Trigger: CCTGTTGAGCACACTCCTGCAAGCCAAACACGTGAA...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCTTCATTTTCTGTCCATaGCCTCATAGGGCCTCAGGG +
Preference number: 2 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSFIFCP*PHRASG
Trigger: CCCTGAGGCCCTATGAGGGCATGGACAGAAAATGAA...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTCATGTTGATCTCCAGTaGTGGAGGTGGGGCCTGCTG +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCHVDLQ*WRWGLL
Trigger: CAGCAGGCCCCACCTCCAGCACTGGAGATCAACATG...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGAGATGGGTGAGTCTATaGCCGGCATGGGGGTTGTGC +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSERWVSL*PAWGLC
Trigger: GCACAACCCCCATGCCGGGCATAGACTCACCCATCT...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTTCCGTGTCTGCTGTGTaGAGGAAGAGTCTGCCCGCA +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCSVSAV*RKSLPA
Trigger: TGCGGGCAGACTCTTCCTCCACACAGCAGACACGGA...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGTCTCACCATTATACCTaGATGGCTGCTGGAATTCCG +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWSHHYT*MAAGIP
Trigger: CGGAATTCCAGCAGCCATCCAGGTATAATGGTGAGA...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTCCAGATGGCTGGGTGTaGGTATCAAAACCTCACCGC +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSPDGWV*VSKPHR
Trigger: GCGGTGAGGTTTTGATACCCACACCCAGCCATCTGG...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGATGACTCCAGATGGCTaGGTGTGGGTATCAAAACCT +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWMTPDG*VWVSKP
Trigger: AGGTTTTGATACCCACACCCAGCCATCTGGAGTCAT...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCCTCCATGACTCCAGATaGCTGGGTGTGGGTATCAAA +
Preference number: 2 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSLHDSR*LGVGIK
Trigger: TTTGATACCCACACCCAGCCATCTGGAGTCATGGAG...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATAGACAAGAAAGCTTCTaGTGGCTCGCTACTGGAAGG +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHRQESF*WLATGR
Trigger: CCTTCCAGTAGCGAGCCACCAGAAGCTTTCTTGTCT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCAGACAAGAAAGCTTCTaGTGGCTCGCTACTGGAAGG +
Preference number: 2 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSRQESF*WLATGR
Trigger: CCTTCCAGTAGCGAGCCACCAGAAGCTTTCTTGTCT...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGATCCCTGGGTGCCACATaGGGGGTTACCACAGTGGGA +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRSLGAT*GVTTVG
Trigger: TCCCACTGTGGTAACCCCCCATGTGGCACCCAGGGA...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTAACAGGGCTGGGAGTTaGCTGCCTGACAAGGAAGGC +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCNRAGS*LPDKEG
Trigger: GCCTTCCTTGTCAGGCAGCCAACTCCCAGCCCTGTT...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAGGCATCCCTTGGGCATaGGAGACCAGGACCTTCTGG +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRGIPWA*ETRTFW
Trigger: CCAGAAGGTCCTGGTCTCCCATGCCCAAGGGATGCC...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGCTACATGGCATCCCTTaGGCATGGGAGACCAGGACC +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSELHGIP*AWETRT
Trigger: GGTCCTGGTCTCCCATGCCCAAGGGATGCCATGTAG...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGGGCAGCCAAGGTCACTaGTTCCTAAGTCCGGAGGAC +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEGSQGH*FLSPED
Trigger: GTCCTCCGGACTTAGGAACCAGTGACCTTGGCTGCC...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTCAGCCTCCACACAGTTaGGCAGCCAAGGTCACTGGT +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCQPPHS*AAKVTG
Trigger: ACCAGTGACCTTGGCTGCCCAACTGTGTGGAGGCTG...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGGGTATCTGGAAAGGTaGGGCGCAGCTTCTTTGGGG +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCGYLER*GAASLG
Trigger: CCCCAAAGAAGCTGCGCCCCACCTTTCCAGATACCC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATTTGGCAAACTCAGGGTaGAATGCAAGGGTTGCCATG +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHLANSG*NARVAM
Trigger: CATGGCAACCCTTGCATTCCACCCTGAGTTTGCCAA...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCTTGGCAAACTCAGGGTaGAATGCAAGGGTTGCCATG +
Preference number: 2 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSLANSG*NARVAM
Trigger: CATGGCAACCCTTGCATTCCACCCTGAGTTTGCCAA...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGCTGCTGGGAGATATTTaGGTCATAGGGACAGATTCC +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWLLGDI*VIGTDS
Trigger: GGAATCTGTCCCTATGACCCAAATATCTCCCAGCAG...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGTCAGCCTCTTGGAACTaGGGGTTGACCTCAGCAGAG +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSESASWN*GLTSAE
Trigger: CTCTGCTGAGGTCAACCCTCAGTTCCAAGAGGCTGA...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATGCGATTAGGGAAGAATaGCATCACACACGAAGAAGC +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHAIREE*HHTRRS
Trigger: GCTTCTTCGTGTGTGATGTCATTCTTCCCTAATCGC...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGCTGGCCTTGCTGGGCTaGACTCCAGGAAGTTTTGCA +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSELALLG*TPGSFA
Trigger: TGCAAAACTTCCTGGAGTTCAGCCCAGCAAGGCCAG...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTTGGAGGAGGGGGCTTTaGAGAATCATCCCTGGGGTT +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCWRRGL*RIIPGV
Trigger: AACCCCAGGGATGATTCTTCAAAGCCCCCTCCTCCA...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCACACCCAGACATTTCTaGAACCACTGGGTTTGCCTA +
Preference number: 2 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSTPRHF*NHWVCL
Trigger: TAGGCAAACCCAGTGGTTTCAGAAATGTCTGGGTGT...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGTTGTCAAGTGAGATTTaGGACAGGGCAGGTATTGAG +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWLSSEI*DRAGIE
Trigger: CTCAATACCTGCCCTGTCTCAAATCTCACTTGACAA...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTACTCCTGATCTTAAGTaGTCCACCTGCCTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSTPDLK*STCLGL
Trigger: GAGGCCAAGGCAGGTGGATCACTTAAGATCAGGAGT...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATAGTGCAATTCATGGGTaGAATCCAGACCCTCTCAGT +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHSAIHG*NPDPLS
Trigger: ACTGAGAGGGTCTGGATTTCACCCATGAATTGCACT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATCTTTGGGGAGGTGACTaGCTCCCTTTATTTTCACAC +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHLWGGD*LPLFSH
Trigger: GTGTGAAAATAAAGGGAGTCAGTCACCTCCCCAAAG...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGTCTGCCCGCACGGCATaGACATGCGCGGTGAGCTGC +
Preference number: 2 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPSARTA*TCAVSC
Trigger: GCAGCTCACCGCGCATGTGCATGCCGTGCGGGCAGA...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTGAACAGAAAGCCAAGTaGCGACGGAAACTGAGAGCA +
Preference number: 2 (lower is better)
Translates to: ESCSLSRKQDGGASPELLEQKAK*RRKLRA
Trigger: TGCTCTCAGTTTCCGTCGGCACTTGGCTTTCTGTTC...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATATTGGAGACCTTGGGTaGTCCAAGTCTGAAAAGGCA +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHIGDLG*SKSEKA
Trigger: TGCCTTTTCAGACTTGGAGCACCCAAGGTCTCCAAT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTGAAAGTTTCTACAGCTaGCCTCAGGCTGTTGCCAGT +
Preference number: 2 (lower is better)
Translates to: ESCSLSRKQDGGASPELLESFYS*PQAVAS
Trigger: ACTGGCAACAGCCTGAGGGCAGCTGTAGAAACTTTC...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTAACTCCAGGAAGTTTTaGAGAGGGACCTGTGATCCC +
Preference number: 2 (lower is better)
Translates to: ESCSLSRKQDGGASPELLNSRKF*RGTCDP
Trigger: GGGATCACAGGTCCCTCTGCAAAACTTCCTGGAGTT...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAGGGGGAAAGGCAGGTTaGTGCCTCCTTGGTCTGGCC +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPGGKAG*CLLGLA
Trigger: GGCCAGACCAAGGAGGCAGCAACCTGCCTTTCCCCC...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATGAAGTACTCATTTTCTaGCCTGAAGACCAGCCTCAG +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHEVLIF*PEDQPQ
Trigger: CTGAGGCTGGTCTTCAGGGCAGAAAATGAGTACTTC...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGCAGTCTGCAGAGGAATaGATTCTCCTAGATTTTCCC +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWQSAEE*ILLDFP
Trigger: GGGAAAATCTAGGAGAATGCATTCCTCTGCAGACTG...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCCTCTCTCTAGCAGTCTaGAGAGGAATGCATTCTCCT +
Preference number: 2 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSLSLAV*RGMHSP
Trigger: AGGAGAATGCATTCCTCTGCAGACTGCTAGAGAGAG...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGCAAAGCAGCCAGGGTaGAAGTCACCGGGACAAACT +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCAKQPG*KSPGQT
Trigger: AGTTTGTCCCGGTGACTTGCACCCTGGCTGCTTTGC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGGGGGGTACCTGCTCTTaGAGCAAGAATGAGCCAACC +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEGGTCS*SKNEPT
Trigger: GGTTGGCTCATTCTTGCTGCAAGAGCAGGTACCCCC...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTCAGGGGTTGCAGCTCTaGAGACCTCCTGGTTATACA +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSQGLQL*RPPGYT
Trigger: TGTATAACCAGGAGGTCTGCAGAGCTGCAACCCCTG...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGAACAGCCTGCAGAACTaGGAGCCAAATAAACCTCTT +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWNSLQN*EPNKPL
Trigger: AAGAGGTTTATTTGGCTCGCAGTTCTGCAGGCTGTT...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCCTTGCTCAAACAGCCTaGAGAACTGCGAGCCAAATA +
Preference number: 2 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSLAQTA*RTASQI
Trigger: TATTTGGCTCGCAGTTCTGCAGGCTGTTTGAGCAAG...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGTCTTGCTGTGTGACGTaGCTGCTCCCCCTTCACCTT +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSESCCVT*LLPLHL
Trigger: AAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGA...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTCCGGCATGGGGGTTGTaGTCAACTGATGAACTACCC +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCPAWGL*STDELP
Trigger: GGGTAGTTCATCAGTTGAGCACAACCCCCATGCCGG...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAGGAAGGAAGCCAGGGTaGGATGGAAAGCCCCCTCTT +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRGRKPG*DGKPPL
Trigger: AAGAGGGGGCTTTCCATCCCACCCTGGCTTCCTTCC...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTAATGCTGGTGCGGGATaGGCTCTAGGAACAGAAAGC +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSNAGAG*ALGTES
Trigger: GCTTTCTGTTCCTAGAGCCCATCCCGCACCAGCATT...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTCAGGTTCCAAAATGCTaGTGCGGGATGGGCTCTAGG +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCQVPKC*CGMGSR
Trigger: CCTAGAGCCCATCCCGCACCAGCATTTTGGAACCTG...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTCCAGATGGCTGGGTGTaGGTATCAAAACCTCACCGC +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCPDGWV*VSKPHR
Trigger: GCGGTGAGGTTTTGATACCCACACCCAGCCATCTGG...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGCCAGATGGCTGGGTGTaGGTATCAAAACCTCACCGC +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEPDGWV*VSKPHR
Trigger: GCGGTGAGGTTTTGATACCCACACCCAGCCATCTGG...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGTCCGGCATAGAGACGTaGTGGGTCTCCATGACTCCA +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSESGIET*WVSMTP
Trigger: TGGAGTCATGGAGACCCACCACGTCTCTATGCCGGA...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGCAAGAAAGCTTCTGGTaGCTCGCTACTGGAAGGGGG +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEQESFW*LATGRG
Trigger: CCCCCTTCCAGTAGCGAGCCACCAGAAGCTTTCTTG...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAGATCCCCCAGGCTCTTaGGAGCTTACATCTGCTCCC +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRDPPGS*ELTSAP
Trigger: GGGAGCAGATGTAAGCTCCCAAGAGCCTGGGGGATC...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTCCATCTAAGTCCAGATaGGAGAGGGCAAACTGCCCA +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSPSKSR*ERANCP
Trigger: TGGGCAGTTTGCCCTCTCCCATCTGGACTTAGATGG...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAGGTCCTGCACCCCTATaGATGTGGTTGGGTGGTTCG +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRGPAPL*MWLGGS
Trigger: CGAACCACCCAACCACATCCATAGGGGTGCAGGACC...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAAACAGGGCTGGGAGTTaGCTGCCTGACAAGGAAGGC +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRNRAGS*LPDKEG
Trigger: GCCTTCCTTGTCAGGCAGCCAACTCCCAGCCCTGTT...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGTGTCTGGGGGCTTTGTaGGTATCTGGAAAGGTGGGG +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSECLGAL*VSGKVG
Trigger: CCCCACCTTTCCAGATACCCACAAAGCCCCCAGACA...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATGGACTGTCTTGTGGGTaGGACTGGAAAAACCTCATT +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHGLSCG*DWKNLI
Trigger: AATGAGGTTTTTCCAGTCCCACCCACAAGACAGTCC...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTAGTCTATGCCCGGCATaGGGGTTGTGCTCAACTGAT +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSSLCPA*GLCSTD
Trigger: ATCAGTTGAGCACAACCCCCATGCCGGGCATAGACT...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTCCTCAGGTCCAGGGATaGAGCAATATCGCAGTTGCA +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSPQVQG*SNIAVA
Trigger: TGCAACTGCGATATTGCTCCATCCCTGGACCTGAGG...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATTCCTGGATTCAGAACTaGGGAAGAAAATCAGACCCC +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHSWIQN*GRKSDP
Trigger: GGGGTCTGATTTTCTTCCCCAGTTCTGAATCCAGGA...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATCACCAACCCAATGCCTaGACAGACTTTCTGAGTCTA +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHHQPNA*TDFLSL
Trigger: TAGACTCAGAAAGTCTGTCCAGGCATTGGGTTGGTG...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGAAACCATTAAAGCACTaGAGACAGCCCTTTAGTGTC +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWKPLKH*RQPFSV
Trigger: GACACTAAAGGGCTGTCTTCAGTGCTTTAATGGTTT...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTAATGGGGAGTGGAGGTaGCTGTGTGTTCATGCCTCT +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCNGEWR*LCVHAS
Trigger: AGAGGCATGAACACACAGTCACCTCCACTCCCCATT...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGAATGGGGAGTGGAGGTaGCTGTGTGTTCATGCCTCT +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSENGEWR*LCVHAS
Trigger: AGAGGCATGAACACACAGTCACCTCCACTCCCCATT...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGACTTGGAACTGAGGGTTaGCCTCAGCAGAGAGTCTCC +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRLGTEG*PQQRVS
Trigger: GGAGACTCTCTGCTGAGGTCAACCCTCAGTTCCAAG...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGATCAGCCTCTTGGAACTaGGGGTTGACCTCAGCAGAG +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRSASWN*GLTSAE
Trigger: CTCTGCTGAGGTCAACCCTCAGTTCCAAGAGGCTGA...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACGTGGTGGGTCTCCATaGCTCCAGATGGCTGGGTGT +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPRGGSP*LQMAGC
Trigger: ACACCCAGCCATCTGGAGTCATGGAGACCCACCACG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTCAAACTCTGAGCTCCTaGAGTCTAAGGAATGCCGCT +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSQTLSS*SLRNAA
Trigger: AGCGGCATTCCTTAGACTTCAGGAGCTCAGAGTTTG...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGACTGCTAGATTTAGGTaGAGAGCAACGTGCAAAACT +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWTARFR*RATCKT
Trigger: AGTTTTGCACGTTGCTCTTCACCTAAATCTAGCAGT...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAAGATCCCAGGACATGTaGCCACACGTGGCCAGGCCA +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPRSQDM*PHVARP
Trigger: TGGCCTGGCCACGTGTGGTCACATGTCCTGGGATCT...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACCCTTCTGGGGCAGTTaGGCAATCAGGTGTGGAGGG +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPPFWGS*AIRCGG
Trigger: CCCTCCACACCTGATTGCTCAACTGCCCCAGAAGGG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACCTGTTCTTGCTGTGTaGCGTGCCTGCTCCCCCTTC +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPPVLAV*RACSPF
Trigger: GAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGGCTTGTTGGTGTAATTaGTCTCATTGCTCCAAACCA +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWACWCN*SHCSKP
Trigger: TGGTTTGGAGCAATGAGATCAATTACACCAACAAGC...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGTCTCTCGAGACCCTATaGAGAGTCCCAAATGAATAT +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWSLETL*RVPNEY
Trigger: ATATTCATTTGGGACTCTTCATAGGGTCTCGAGAGA...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATCCTCCAACTTTCTCCTaGATTCTGATTCACATGACC +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHPPTFS*ILIHMT
Trigger: GGTCATGTGAATCAGAATTCAGGAGAAAGTTGGAGG...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAACATGCGCGGTGAGCTaGAACACAGTGTGGCTGGCG +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPTCAVS*NTVWLA
Trigger: CGCCAGCCACACTGTGTTGCAGCTCACCGCGCATGT...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTGGGAGAAAGGCTCTCTaGAGGTTCCAAAATGCTGGT +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSGRKAL*RFQNAG
Trigger: ACCAGCATTTTGGAACCTGCAGAGAGCCTTTCTCCC...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTATTGGAGACCTTGGGTaGTCCAAGTCTGAAAAGGCA +
Preference number: 2 (lower is better)
Translates to: ESCSLSRKQDGGASPELLIGDLG*SKSEKA
Trigger: TGCCTTTTCAGACTTGGAGCACCCAAGGTCTCCAAT...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATTTGGGAGCTTACATCTaGTCCCTCCTCCATATTATG +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHLGAYI*SLLHIM
Trigger: CATAATATGGAGGAGGGAGCAGATGTAAGCTCCCAA...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGATCCTTGGTCTGGCCTTaGTGGGCTGAACTCCAGGAA +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRSLVWP*WAELQE
Trigger: TTCCTGGAGTTCAGCCCAGCAAGGCCAGACCAAGGA...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTGTCTACTTAGGGTCCTaGACCCCTATGGATGTGGTT +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSVYLGS*TPMDVV
Trigger: AACCACATCCATAGGGGTGCAGGACCCTAAGTAGAC...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAGCAAAGCAGCCAGGGTaGAAGTCACCGGGACAAACT +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRAKQPG*KSPGQT
Trigger: AGTTTGTCCCGGTGACTTGCACCCTGGCTGCTTTGC...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAGGGCTGGGAGTTGGCTaGCTGACAAGGAAGGCTTCC +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPGLGVG*LTRKAS
Trigger: GGAAGCCTTCCTTGTCAGGCAGCCAACTCCCAGCCC...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAGGGGGTACCTGCTCTTaGAGCAAGAATGAGCCAACC +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRGGTCS*SKNEPT
Trigger: GGTTGGCTCATTCTTGCTGCAAGAGCAGGTACCCCC...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATGTGGAATGCAAGGGTTaGCATGGTAATATCCCTCTT +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHVECKG*HGNIPL
Trigger: AAGAGGGATATTACCATGGCAACCCTTGCATTCCAC...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCAAACTCAGGGTGGAATaGAAGGGTTGCCATGGTAAT +
Preference number: 2 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSKLRVE*KGCHGN
Trigger: ATTACCATGGCAACCCTTGCATTCCACCCTGAGTTT...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATAAACTCAGGGTGGAATaGAAGGGTTGCCATGGTAAT +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHKLRVE*KGCHGN
Trigger: ATTACCATGGCAACCCTTGCATTCCACCCTGAGTTT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGTTCTTTAAGGGTAATTaGCTCTCCCAGCAGGATACA +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWFFKGN*LSQQDT
Trigger: TGTATCCTGCTGGGAGAGGCAATTACCCTTAAAGAA...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTTTCATTTTCTGTCCATaGCCTCATAGGGCCTCAGGG +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSFIFCP*PHRASG
Trigger: CCCTGAGGCCCTATGAGGGCATGGACAGAAAATGAA...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTTCTTGCTCCTGTTCTTaGTGTGTGACGTGCCTGCTC +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCSCSCS*CVTCLL
Trigger: GAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGA...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATATCGCAGTTGCACCTTaGATTCCCTGGAATATTCCT +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHIAVAP*IPWNIP
Trigger: AGGAATATTCCAGGGAATGCAAGGTGCAACTGCGAT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTTCTCACCATTATACCTaGATGGCTGCTGGAATTCCG +
Preference number: 2 (lower is better)
Translates to: ESCSLSRKQDGGASPELLSHHYT*MAAGIP
Trigger: CGGAATTCCAGCAGCCATCCAGGTATAATGGTGAGA...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGACAGGTTCCAAAATGCTaGTGCGGGATGGGCTCTAGG +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRQVPKC*CGMGSR
Trigger: CCTAGAGCCCATCCCGCACCAGCATTTTGGAACCTG...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTATGACTCCAGATGGCTaGGTGTGGGTATCAAAACCT +
Preference number: 2 (lower is better)
Translates to: ESCSLSRKQDGGASPELLMTPDG*VWVSKP
Trigger: AGGTTTTGATACCCACACCCAGCCATCTGGAGTCAT...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGATCCGGCATAGAGACGTaGTGGGTCTCCATGACTCCA +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRSGIET*WVSMTP
Trigger: TGGAGTCATGGAGACCCACCACGTCTCTATGCCGGA...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGACAAGAAAGCTTCTGGTaGCTCGCTACTGGAAGGGGG +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRQESFW*LATGRG
Trigger: CCCCCTTCCAGTAGCGAGCCACCAGAAGCTTTCTTG...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACCCTATGGATGTGGTTaGGTGGTTCGGGGGTCAGGG +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPPYGCG*VVRGSG
Trigger: CCCTGACCCCCGAACCACCCAACCACATCCATAGGG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTCCTACTCCTGCACAGTaGCTAATCTCTCTGCCAATG +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSPTPAQ*LISLPM
Trigger: CATTGGCAGAGAGATTAGCCACTGTGCAGGAGTAGG...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTTTCCAGAAAACAGGATaGCGGCGCCTCTCCAGAACT +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCFQKTG*RRLSRT
Trigger: AGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAA...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGGAAGTCACTTCCAGCTaGGGCTACATGGCATCCCTT +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEEVTSS*GYMASL
Trigger: AAGGGATGCCATGTAGCCCCAGCTGGAAGTGACTTC...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGATGTCTGGGGGCTTTGTaGGTATCTGGAAAGGTGGGG +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRCLGAL*VSGKVG
Trigger: CCCCACCTTTCCAGATACCCACAAAGCCCCCAGACA...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGGTCAGATCAGTCACGTaGGACCCAAGCACATTCTGG +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEVRSVT*DPSTFW
Trigger: CCAGAATGTGCTTGGGTCCCACGTGACTGATCTGAC...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGTCAGATCAGTCACGTaGGACCCAAGCACATTCTGG +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCVRSVT*DPSTFW
Trigger: CCAGAATGTGCTTGGGTCCCACGTGACTGATCTGAC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTGCTCTGCAGACCTCCTaGTTATACAACCAGGATGTG +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSALQTS*LYNQDV
Trigger: CACATCCTGGTTGTATAACCAGGAGGTCTGCAGAGC...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGGACTCTTAGCTCCATaGGGATCACTGAAGAGGCCA +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCGLLAP*GSLKRP
Trigger: TGGCCTCTTCAGTGATCCCCATGGAGCTAAGAGTCC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTGTGAGCCACCGCACCTaGTCCTTAATGCTTCTTTTC +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSVSHRT*SLMLLF
Trigger: GAAAAGAAGCATTAAGGACCAGGTGCGGTGGCTCAC...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGCAGGGTAGGGGCAGGTaGCCGGGCAAGCTTTTCCAC +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGQGRGR*PGKLFH
Trigger: GTGGAAAAGCTTGCCCGGCCACCTGCCCCTACCCTG...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTCCTGAGGAAAAGAGATaGGTGAGTCTATGCCCGGCA +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCPEEKR*VSLCPA
Trigger: TGCCGGGCATAGACTCACCCATCTCTTTTCCTCAGG...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTCCTCAGGTCCAGGGATaGAGCAATATCGCAGTTGCA +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCPQVQG*SNIAVA
Trigger: TGCAACTGCGATATTGCTCCATCCCTGGACCTGAGG...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 90 bp GCACAGTGGCTAATCTCTCTGCCAATGAAATCTAACCCTCACCTCTaGAAGGGTCTCTGTTCTCCAGCAGGAGGCAGAAGAACTCGCAGA +
Preference number: 2 (lower is better)
Translates to: AQWLISLPMKSNPHL*KGLCSPAGGRRTRR
Trigger: TCTGCGAGTTCTTCTGCCTCCTGCTGGAGAACAGAGACCCTTCAAGAGGTGAGGGTTAGATTTCATTGGCAGAGAGATTAGCCACTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 90 bp TTTGTCAGATCAGTCACGTGGGACCCAAGCACATTCTGGAAGCCATaGCTAATAGTCCCGATGCTAGATTCTGTCTGGGGGCTTTGTGGG +
Preference number: 2 (lower is better)
Translates to: FVRSVTWDPSTFWKP*LIVPMLDSVWGLCG
Trigger: CCCACAAAGCCCCCAGACAGAATCTAGCATCGGGACTATTAGCAATGGCTTCCAGAATGTGCTTGGGTCCCACGTGACTGATCTGACAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATAAACCATTAAAGCACTaGAGACAGCCCTTTAGTGTC +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHKPLKH*RQPFSV
Trigger: GACACTAAAGGGCTGTCTTCAGTGCTTTAATGGTTT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGGGTGAGGGGTGCAGCTaGAGACCGCCAGGGCTGCAC +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREGEGCS*RPPGLH
Trigger: GTGCAGCCCTGGCGGTCTTCAGCTGCACCCCTCACC...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGAGTGCCGACGGAAACTaGGAGCACCCCAGCTCTACC +
Preference number: 2 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPSADGN*EHPSST
Trigger: GGTAGAGCTGGGGTGCTCTCAGTTTCCGTCGGCACT...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTGTCAGTTGCAGAATCTaGAGGCCAGAAGATCTTATG +
Preference number: 2 (lower is better)
Translates to: ESCSLSRKQDGGASPELLVSCRI*RPEDLM
Trigger: CATAAGATCTTCTGGCCTTCAGATTCTGCAACTGAC...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATGACTTGGAATGGTGTTaGAAACAGATCCTTGGATTC +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHDLEWC*KQILGF
Trigger: GAATCCAAGGATCTGTTTTCAACACCATTCCAAGTC...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATATTCATAGTAGTGGCTaGCATCTAGGAAAAGTCAGG +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHIHSSG*HLGKVR
Trigger: CCTGACTTTTCCTAGATGTCAGCCACTACTATGAAT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGTTGCAGAGGGACCTGTaGTCCCCCAGGCTCTTGGGA +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGLQRDL*SPRLLG
Trigger: TCCCAAGAGCCTGGGGGATCACAGGTCCCTCTGCAA...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTACACCCAGACATTTCTaGAACCACTGGGTTTGCCTA +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSTPRHF*NHWVCL
Trigger: TAGGCAAACCCAGTGGTTTCAGAAATGTCTGGGTGT...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATACTGCTAGATTTAGGTaGAGAGCAACGTGCAAAACT +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHTARFR*RATCKT
Trigger: AGTTTTGCACGTTGCTCTTCACCTAAATCTAGCAGT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGAGATCCCAGGACATGTaGCCACACGTGGCCAGGCCA +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGRSQDM*PHVARP
Trigger: TGGCCTGGCCACGTGTGGTCACATGTCCTGGGATCT...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTTCTGTACCATCACGGTaGTATAGGAAAAGGGGCCCT +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCSVPSR*YRKRGP
Trigger: AGGGCCCCTTTTCCTATATCACCGTGATGGTACAGA...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGCCCCAAATTTCATGTTaGTCTCCAGTGCTGGAGGTG +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEPQISC*SPVLEV
Trigger: CACCTCCAGCACTGGAGATCAACATGAAATTTGGGG...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGGCTTTAGAGAAACCTaGAGCCAGGGAGGAATGTCA +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCGFRET*SQGGMS
Trigger: TGACATTCCTCCCTGGCTTCAGGTTTCTCTAAAGCC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTCAGAAAGCTCATCTTTaGTGCTCCCTCGAGTCAGCA +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCQKAHL*CSLESA
Trigger: TGCTGACTCGAGGGAGCATCAAAGATGAGCTTTCTG...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACTCTCCACCAGGAGCTaGCAGGATCCTTTCTTGGCC +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPLSTRS*QDPFLA
Trigger: GGCCAAGAAAGGATCCTGTCAGCTCCTGGTGGAGAG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCATGTGGAGGAAGAGTCTaGCCGCACGGCATGCACATG +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPCGGRV*PHGMHM
Trigger: CATGTGCATGCCGTGCGGGCAGACTCTTCCTCCACA...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCTTCATGCCTCTCTCTTaGTCTCTCACCATTATACCT +
Preference number: 2 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSFMPLS*SLTIIP
Trigger: AGGTATAATGGTGAGAGAGCAAGAGAGAGGCATGAA...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTTTGGGAGCTTACATCTaGTCCCTCCTCCATATTATG +
Preference number: 2 (lower is better)
Translates to: ESCSLSRKQDGGASPELLLGAYI*SLLHIM
Trigger: CATAATATGGAGGAGGGAGCAGATGTAAGCTCCCAA...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTAACTCCAGGAAGTTTTaGAGAGGGACCTGTGATCCC +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCNSRKF*RGTCDP
Trigger: GGGATCACAGGTCCCTCTGCAAAACTTCCTGGAGTT...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAGGAAAGGCAGGTTGCTaGCTCCTTGGTCTGGCCTTG +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPGKAGC*LLGLAL
Trigger: CAAGGCCAGACCAAGGAGGCAGCAACCTGCCTTTCC...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTTATCCCTTCAAGATCTaGTATGCCCTCCCATCTAAG +
Preference number: 2 (lower is better)
Translates to: ESCSLSRKQDGGASPELLYPFKI*YALPSK
Trigger: CTTAGATGGGAGGGCATAGCAGATCTTGAAGGGATA...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGTCTACTTAGGGTCCTaGACCCCTATGGATGTGGTT +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCVYLGS*TPMDVV
Trigger: AACCACATCCATAGGGGTGCAGGACCCTAAGTAGAC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTTTTCCTCCCTACTCCTaGACAGTGGCTAATCTCTCT +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSFPPYS*TVANLS
Trigger: AGAGAGATTAGCCACTGTGCAGGAGTAGGGAGGAAA...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATAGGAAAATGCCTTCTTaGTCATCACTTGTGCTTTCC +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHRKMPS*SSLVLS
Trigger: GGAAAGCACAAGTGATGAGCAAGAAGGCATTTTCCT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTTGCAGAGAGTCAGGTTaGACTCAGGCTGAATTGGAG +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCCRESG*TQAELE
Trigger: CTCCAATTCAGCCTGAGTGCAACCTGACTCTCTGCA...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTTGGCTTGCAGGAGTGTaGTCAACAGGCAAACCGATA +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCWLAGV*STGKPI
Trigger: TATCGGTTTGCCTGTTGAGCACACTCCTGCAAGCCA...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGTTCACGTGTTTGGCTTaGAGGAGTGTGCTCAACAGG +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEFTCLA*RSVLNR
Trigger: CCTGTTGAGCACACTCCTGCAAGCCAAACACGTGAA...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGGCTCTTTTGGATAACTaGAAGATCGTAGACCATTTG +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWALLDN*KIVDHL
Trigger: CAAATGGTCTACGATCTTGCAGTTATCCAAAAGAGC...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGTTCATTTTCTGTCCATaGCCTCATAGGGCCTCAGGG +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEFIFCP*PHRASG
Trigger: CCCTGAGGCCCTATGAGGGCATGGACAGAAAATGAA...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGCTGTCCTGGGTGGTTaGATCCTTCATTTTCTGTCC +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCAVLGG*ILHFLS
Trigger: GGACAGAAAATGAAGGATGCAACCACCCAGGACAGC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGGAGCTTAGCAGCTTCTaGAAGGAAGGAGAGCAAGGA +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEELSSF*KEGEQG
Trigger: TCCTTGCTCTCCTTCCTTGCAGAAGCTGCTAAGCTC...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAATGTTCTTCAGGGGTTaGAGCTCTGCAGACCTCCTG +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRMFFRG*SSADLL
Trigger: CAGGAGGTCTGCAGAGCTGCAACCCCTGAAGAACAT...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAAGATGGGTGAGTCTATaGCCGGCATGGGGGTTGTGC +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPRWVSL*PAWGLC
Trigger: GCACAACCCCCATGCCGGGCATAGACTCACCCATCT...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATTTGAGTTCTTTCTTCTaGTCTCCTGGCCTCAGTTTA +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHLSSFF*SPGLSL
Trigger: TAAACTGAGGCCAGGAGAGCAGAAGAAAGAACTCAA...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCATCCGTGTCTGCTGTGTaGAGGAAGAGTCTGCCCGCA +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPSVSAV*RKSLPA
Trigger: TGCGGGCAGACTCTTCCTCCACACAGCAGACACGGA...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGCTTGGGTTGAAAGAATaGGGAGTGGAGGTGACTGTG +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSELGLKE*GVEVTV
Trigger: CACAGTCACCTCCACTCCCCATTCTTTCAACCCAAG...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAGGAAGGAAGCCAGGGTaGGATGGAAAGCCCCCTCTT +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPGRKPG*DGKPPL
Trigger: AAGAGGGGGCTTTCCATCCCACCCTGGCTTCCTTCC...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAAATGCTGGTGCGGGATaGGCTCTAGGAACAGAAAGC +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRNAGAG*ALGTES
Trigger: GCTTTCTGTTCCTAGAGCCCATCCCGCACCAGCATT...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGCTCCATGACTCCAGATaGCTGGGTGTGGGTATCAAA +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSELHDSR*LGVGIK
Trigger: TTTGATACCCACACCCAGCCATCTGGAGTCATGGAG...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGTTGAAAACAGATCCTTaGATTCAGTTCTCTTCCCCA +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWLKTDP*IQFSSP
Trigger: TGGGGAAGAGAACTGAATCCAAGGATCTGTTTTCAA...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGATTGGTCTGGCCTTGCTaGGCTGAACTCCAGGAAGTT +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRLVWPC*AELQEV
Trigger: AACTTCCTGGAGTTCAGCCCAGCAAGGCCAGACCAA...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGACCATCTAAGTCCAGATaGGAGAGGGCAAACTGCCCA +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRPSKSR*ERANCP
Trigger: TGGGCAGTTTGCCCTCTCCCATCTGGACTTAGATGG...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAATGGATGTGGTTGGGTaGTTCGGGGGTCAGGGAAAA +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRMDVVG*FGGQGK
Trigger: TTTTCCCTGACCCCCGAACCACCCAACCACATCCAT...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGCCTACTCCTGCACAGTaGCTAATCTCTCTGCCAATG +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEPTPAQ*LISLPM
Trigger: CATTGGCAGAGAGATTAGCCACTGTGCAGGAGTAGG...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACTACATGGCATCCCTTaGGCATGGGAGACCAGGACC +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPLHGIP*AWETRT
Trigger: GGTCCTGGTCTCCCATGCCCAAGGGATGCCATGTAG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAGAAGTCACTTCCAGCTaGGGCTACATGGCATCCCTT +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELREVTSS*GYMASL
Trigger: AAGGGATGCCATGTAGCCCCAGCTGGAAGTGACTTC...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTATGCTAGATTCTGTCTaGGGGCTTTGTGGGTATCTG +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSMLDSV*GLCGYL
Trigger: CAGATACCCACAAAGCCCCCAGACAGAATCTAGCAT...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGGGAGCTGTCCTGGGTaGTTGCATCCTTCATTTTCT +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCGSCPG*LHPSFS
Trigger: AGAAAATGAAGGATGCAACCACCCAGGACAGCTCCC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGCTCTGCAGACCTCCTaGTTATACAACCAGGATGTG +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCALQTS*LYNQDV
Trigger: CACATCCTGGTTGTATAACCAGGAGGTCTGCAGAGC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTAATTATCATGGAGACTaGGTCGGTAAGAGGCAGCCC +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCNYHGD*VGKRQP
Trigger: GGGCTGCCTCTTACCGACCCAGTCTCCATGATAATT...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTCCCCATGGCACTCAATaGCCTGCATGTTTCCAAAGT +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCPHGTQ*PACFQS
Trigger: ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGG...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCATGGGTGGAAGAGTCCTaGCTCCTGGGCTTTCTCCAG +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPWVEES*LLGFLQ
Trigger: CTGGAGAAAGCCCAGGAGCCAGGACTCTTCCACCCA...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATGAAAAAGCTTCTTCCTaGATTCAGAACTGGGGAAGA +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHEKASS*IQNWGR
Trigger: TCTTCCCCAGTTCTGAATCCAGGAAGAAGCTTTTTC...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGCGATTAGGGAAGAATaGCATCACACACGAAGAAGC +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCAIREE*HHTRRS
Trigger: GCTTCTTCGTGTGTGATGTCATTCTTCCCTAATCGC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATACTTGCAGAGGTGAATaGGAAAACTTTCATTGGAGA +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHTCRGE*ENFHWR
Trigger: TCTCCAATGAAAGTTTTCTCATTCACCTCTGCAAGT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATCCTCCATATTATGGCTaGAGCCTTAGTTTTACTTGT +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHPPYYG*SLSFTC
Trigger: ACAAGTAAAACTAAGGCTTCAGCCATAATATGGAGG...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGACAAACTCTGAGCTCCTaGAGTCTAAGGAATGCCGCT +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRQTLSS*SLRNAA
Trigger: AGCGGCATTCCTTAGACTTCAGGAGCTCAGAGTTTG...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTAGCATAAAATTTGTGTaGACAGGGCTGGGAGTTGGC +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCSIKFV*TGLGVG
Trigger: GCCAACTCCCAGCCCTGTTCACACAAATTTTATGCT...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTTTGTCAAGTGAGATTTaGGACAGGGCAGGTATTGAG +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSLSSEI*DRAGIE
Trigger: CTCAATACCTGCCCTGTCTCAAATCTCACTTGACAA...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGACTGTCTTTGATTTATaGCCTGAGTCTGGACTTAAA +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWTVFDL*PESGLK
Trigger: TTTAAGTCCAGACTCAGGTCATAAATCAAAGACAGT...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGATCTGTACCATCACGGTaGTATAGGAAAAGGGGCCCT +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRSVPSR*YRKRGP
Trigger: AGGGCCCCTTTTCCTATATCACCGTGATGGTACAGA...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGGAGAATGTTCTGATTTaGGGTCTTTTAAGACAGATG +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWENVLI*GLLRQM
Trigger: CATCTGTCTTAAAAGACCTCAAATCAGAACATTCTC...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAAGGAAAAGAGATGGGTaGGTCTATGCCCGGCATGGG +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPRKRDG*VYARHG
Trigger: CCCATGCCGGGCATAGACTCACCCATCTCTTTTCCT...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTCGAGAAACACTAGTTTaGAAGCCAACCCATCACACC +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCRETLV*KPTHHT
Trigger: GGTGTGATGGGTTGGCTTTCAAACTAGTGTTTCTCG...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGCGAGAAACACTAGTTTaGAAGCCAACCCATCACACC +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSERETLV*KPTHHT
Trigger: GGTGTGATGGGTTGGCTTTCAAACTAGTGTTTCTCG...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAGAGGCATTCTGGGCTTaGCAGATGTCAGCATCCTCC +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPEAFWA*QMSASS
Trigger: GGAGGATGCTGACATCTGTCAAGCCCAGAATGCCTC...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGTGTGGAGGAAGAGTCTaGCCGCACGGCATGCACATG +
Preference number: 2 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPCGGRV*PHGMHM
Trigger: CATGTGCATGCCGTGCGGGCAGACTCTTCCTCCACA...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTAAGTGCAACCCCAGTTaGACTCAACCTTGGGTTCTT +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCKCNPS*TQPWVL
Trigger: AAGAACCCAAGGTTGAGTGCAACTGGGGTTGCACTT...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTTTATACCTGGATGGCTaGTGGAATTCCGAGATGAAG +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSLYLDG*WNSEMK
Trigger: CTTCATCTCGGAATTCCAGCAGCCATCCAGGTATAA...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTTTCATGCCTCTCTCTTaGTCTCTCACCATTATACCT +
Preference number: 2 (lower is better)
Translates to: ESCSLSRKQDGGASPELLFMPLS*SLTIIP
Trigger: AGGTATAATGGTGAGAGAGCAAGAGAGAGGCATGAA...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAGAACAGAAAGCCAAGTaGCGACGGAAACTGAGAGCA +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELREQKAK*RRKLRA
Trigger: TGCTCTCAGTTTCCGTCGGCACTTGGCTTTCTGTTC...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAGGGAGAAAGGCTCTCTaGAGGTTCCAAAATGCTGGT +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRGRKAL*RFQNAG
Trigger: ACCAGCATTTTGGAACCTGCAGAGAGCCTTTCTCCC...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGAACCTGCCTCACCCCTaGCCCAAAGAAGCAGGGATG +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGNLPHP*PKEAGM
Trigger: CATCCCTGCTTCTTTGGGGCAGGGGTGAGGCAGGTT...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGAAAAATCCTACCCACTaGATAGAGACAAGAAAGCTT +
Preference number: 2 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWKNPTH*IETRKL
Trigger: AAGCTTTCTTGTCTCTATGCAGTGGGTAGGATTTTT...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAGCAAAGCAGCCAGGGTaGAAGTCACCGGGACAAACT +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPAKQPG*KSPGQT
Trigger: AGTTTGTCCCGGTGACTTGCACCCTGGCTGCTTTGC...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGATTCACGTGTTTGGCTTaGAGGAGTGTGCTCAACAGG +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRFTCLA*RSVLNR
Trigger: CCTGTTGAGCACACTCCTGCAAGCCAAACACGTGAA...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATGCTCTTTTGGATAACTaGAAGATCGTAGACCATTTG +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHALLDN*KIVDHL
Trigger: CAAATGGTCTACGATCTTGCAGTTATCCAAAAGAGC...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCGCTCTTTTGGATAACTaGAAGATCGTAGACCATTTG +
Preference number: 2 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSALLDN*KIVDHL
Trigger: CAAATGGTCTACGATCTTGCAGTTATCCAAAAGAGC...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGATTCATTTTCTGTCCATaGCCTCATAGGGCCTCAGGG +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRFIFCP*PHRASG
Trigger: CCCTGAGGCCCTATGAGGGCATGGACAGAAAATGAA...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTAACAGCCTGCAGAACTaGGAGCCAAATAAACCTCTT +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSNSLQN*EPNKPL
Trigger: AAGAGGTTTATTTGGCTCGCAGTTCTGCAGGCTGTT...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGCTTGCTCAAACAGCCTaGAGAACTGCGAGCCAAATA +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSELAQTA*RTASQI
Trigger: TATTTGGCTCGCAGTTCTGCAGGCTGTTTGAGCAAG...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACCGGCATGGGGGTTGTaGTCAACTGATGAACTACCC +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPPAWGL*STDELP
Trigger: GGGTAGTTCATCAGTTGAGCACAACCCCCATGCCGG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGAGCAATATCGCAGTTaGACCTTGCATTCCCTGGAA +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCEQYRS*TLHSLE
Trigger: TTCCAGGGAATGCAAGGTGCAACTGCGATATTGCTC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAAGAGCCACTGGCTTGTaGAACTCTCCACCAGGAGCT +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPRATGL*NSPPGA
Trigger: AGCTCCTGGTGGAGAGTTGCACAAGCCAGTGGCTCT...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGTCCGTGTCTGCTGTGTaGAGGAAGAGTCTGCCCGCA +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGSVSAV*RKSLPA
Trigger: TGCGGGCAGACTCTTCCTCCACACAGCAGACACGGA...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGGGAAGGAAGCCAGGGTaGGATGGAAAGCCCCCTCTT +
Preference number: 2 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPGRKPG*DGKPPL
Trigger: AAGAGGGGGCTTTCCATCCCACCCTGGCTTCCTTCC...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATTTGAAAACAGATCCTTaGATTCAGTTCTCTTCCCCA +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHLKTDP*IQFSSP
Trigger: TGGGGAAGAGAACTGAATCCAAGGATCTGTTTTCAA...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGGCAGCCAAGGTCACTaGTTCCTAAGTCCGGAGGAC +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGGSQGH*FLSPED
Trigger: GTCCTCCGGACTTAGGAACCAGTGACCTTGGCTGCC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCATGTCTGGGGGCTTTGTaGGTATCTGGAAAGGTGGGG +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPCLGAL*VSGKVG
Trigger: CCCCACCTTTCCAGATACCCACAAAGCCCCCAGACA...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGATTGGCAAACTCAGGGTaGAATGCAAGGGTTGCCATG +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRLANSG*NARVAM
Trigger: CATGGCAACCCTTGCATTCCACCCTGAGTTTGCCAA...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTCAAAGTTCACGTGTTTaGCTTGCAGGAGTGTGCTCA +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCQSSRV*LAGVCS
Trigger: TGAGCACACTCCTGCAAGCCAAACACGTGAACTTTG...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAGTGAGCCACCGCACCTaGTCCTTAATGCTTCTTTTC +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRVSHRT*SLMLLF
Trigger: GAAAAGAAGCATTAAGGACCAGGTGCGGTGGCTCAC...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAAATTATCATGGAGACTaGGTCGGTAAGAGGCAGCCC +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRNYHGD*VGKRQP
Trigger: GGGCTGCCTCTTACCGACCCAGTCTCCATGATAATT...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTCTGCTGGGAGATATTTaGGTCATAGGGACAGATTCC +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCLLGDI*VIGTDS
Trigger: GGAATCTGTCCCTATGACCCAAATATCTCCCAGCAG...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGGACTGTCTTGTGGGTaGGACTGGAAAAACCTCATT +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCGLSCG*DWKNLI
Trigger: AATGAGGTTTTTCCAGTCCCACCCACAAGACAGTCC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGTGGGTGGAAGAGTCCTaGCTCCTGGGCTTTCTCCAG +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGWVEES*LLGFLQ
Trigger: CTGGAGAAAGCCCAGGAGCCAGGACTCTTCCACCCA...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATTTTTTGGTTGGTCCTTaGAGAAAAAGCTTCTTCCTG +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHFLVGP*RKSFFL
Trigger: CAGGAAGAAGCTTTTTCTCCAAGGACCAACCAAAAA...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAAATGGGGAGTGGAGGTaGCTGTGTGTTCATGCCTCT +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPNGEWR*LCVHAS
Trigger: AGAGGCATGAACACACAGTCACCTCCACTCCCCATT...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGTCAGTTGCAGAATCTaGAGGCCAGAAGATCTTATG +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCVSCRI*RPEDLM
Trigger: CATAAGATCTTCTGGCCTTCAGATTCTGCAACTGAC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTATTCATAGTAGTGGCTaGCATCTAGGAAAAGTCAGG +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSIHSSG*HLGKVR
Trigger: CCTGACTTTTCCTAGATGTCAGCCACTACTATGAAT...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTGATTACTGGCTAATCTaGCTACACAAGCTTGAATTC +
Preference number: 2 (lower is better)
Translates to: ESCSLSRKQDGGASPELLDYWLI*LHKLEF
Trigger: GAATTCAAGCTTGTGTAGTCAGATTAGCCAGTAATC...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTCCTCCATATTATGGCTaGAGCCTTAGTTTTACTTGT +
Preference number: 2 (lower is better)
Translates to: ESCSLSRKQDGGASPELLPPYYG*SLSFTC
Trigger: ACAAGTAAAACTAAGGCTTCAGCCATAATATGGAGG...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAACTCATTTTCTGCCCTaGAGACCAGCCTCAGCTGCA +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPTHFLP*RPASAA
Trigger: TGCAGCTGAGGCTGGTCTTCAGGGCAGAAAATGAGT...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGTGGGAGTTGGCTGCCTaGCAAGGAAGGCTTCCCTAT +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGWELAA*QGRLPY
Trigger: ATAGGGAAGCCTTCCTTGTCAGGCAGCCAACTCCCA...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTAGACAGGGCAGGTATTaGGAAAGAAGACTCATAAGA +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSRQGRY*ERRLIR
Trigger: TCTTATGAGTCTTCTTTCTCAATACCTGCCCTGTCT...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGTTGTCAAGTGAGATTTaGGACAGGGCAGGTATTGAG +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSELSSEI*DRAGIE
Trigger: CTCAATACCTGCCCTGTCTCAAATCTCACTTGACAA...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCGAGAATGTTCTGATTTaGGGTCTTTTAAGACAGATG +
Preference number: 2 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSENVLI*GLLRQM
Trigger: CATCTGTCTTAAAAGACCTCAAATCAGAACATTCTC...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACAGATTCCTCATGAATaGCTCGGTGCCCTCCCTGTA +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPQIPHE*LGALPV
Trigger: TACAGGGAGGGCACCGAGTCATTCATGAGGAATCTG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACCAACCCATCACACCTaGGGAAAAGAGATGGGTGAG +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPPTHHT*GKEMGE
Trigger: CTCACCCATCTCTTTTCCTCAGGTGTGATGGGTTGG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAAAGTGCAACCCCAGTTaGACTCAACCTTGGGTTCTT +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRKCNPS*TQPWVL
Trigger: AAGAACCCAAGGTTGAGTGCAACTGGGGTTGCACTT...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTTTATACCTGGATGGCTaGTGGAATTCCGAGATGAAG +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCLYLDG*WNSEMK
Trigger: CTTCATCTCGGAATTCCAGCAGCCATCCAGGTATAA...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTTTCATGCCTCTCTCTTaGTCTCTCACCATTATACCT +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSFMPLS*SLTIIP
Trigger: AGGTATAATGGTGAGAGAGCAAGAGAGAGGCATGAA...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCAAAAATCCTACCCACTaGATAGAGACAAGAAAGCTT +
Preference number: 2 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSKNPTH*IETRKL
Trigger: AAGCTTTCTTGTCTCTATGCAGTGGGTAGGATTTTT...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATAAAAATCCTACCCACTaGATAGAGACAAGAAAGCTT +
Preference number: 2 (lower is better)
Translates to: THVPSLMTATITATPPPHKNPTH*IETRKL
Trigger: AAGCTTTCTTGTCTCTATGCAGTGGGTAGGATTTTT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGTTGGGAGCTTACATCTaGTCCCTCCTCCATATTATG +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSELGAYI*SLLHIM
Trigger: CATAATATGGAGGAGGGAGCAGATGTAAGCTCCCAA...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGGGGGGAAAGGCAGGTTaGTGCCTCCTTGGTCTGGCC +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREGGKAG*CLLGLA
Trigger: GGCCAGACCAAGGAGGCAGCAACCTGCCTTTCCCCC...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAGAAGTACTCATTTTCTaGCCTGAAGACCAGCCTCAG +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELREVLIF*PEDQPQ
Trigger: CTGAGGCTGGTCTTCAGGGCAGAAAATGAGTACTTC...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGTGGGGAGGGTGGGCTTaGTTCCAGGTCACTGGGAGC +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREWGGWA*FQVTGS
Trigger: GCTCCCAGTGACCTGGAAGCAAGCCCACCCTCCCCA...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTCAGTCTGCAGAGGAATaGATTCTCCTAGATTTTCCC +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCQSAEE*ILLDFP
Trigger: GGGAAAATCTAGGAGAATGCATTCCTCTGCAGACTG...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGGGGGTACCTGCTCTTaGAGCAAGAATGAGCCAACC +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGGGTCS*SKNEPT
Trigger: GGTTGGCTCATTCTTGCTGCAAGAGCAGGTACCCCC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
49% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGAAACTCAGGGTGGAATaGAAGGGTTGCCATGGTAAT +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEKLRVE*KGCHGN
Trigger: ATTACCATGGCAACCCTTGCATTCCACCCTGAGTTT...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAATGTTCTTCAGGGGTTaGAGCTCTGCAGACCTCCTG +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPMFFRG*SSADLL
Trigger: CAGGAGGTCTGCAGAGCTGCAACCCCTGAAGAACAT...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGATCGCAGTTGCACCTTaGATTCCCTGGAATATTCCT +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEIAVAP*IPWNIP
Trigger: AGGAATATTCCAGGGAATGCAAGGTGCAACTGCGAT...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGACCATTATACCTGGATaGCTGCTGGAATTCCGAGAT +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSETIIPG*LLEFRD
Trigger: ATCTCGGAATTCCAGCAGCCATCCAGGTATAATGGT...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGATCTCACCATTATACCTaGATGGCTGCTGGAATTCCG +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRSHHYT*MAAGIP
Trigger: CGGAATTCCAGCAGCCATCCAGGTATAATGGTGAGA...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGCAGGTTCCAAAATGCTaGTGCGGGATGGGCTCTAGG +
Preference number: 2 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPQVPKC*CGMGSR
Trigger: CCTAGAGCCCATCCCGCACCAGCATTTTGGAACCTG...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTTTGAAAACAGATCCTTaGATTCAGTTCTCTTCCCCA +
Preference number: 2 (lower is better)
Translates to: ESCSLSRKQDGGASPELLLKTDP*IQFSSP
Trigger: TGGGGAAGAGAACTGAATCCAAGGATCTGTTTTCAA...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCATTGGTCTGGCCTTGCTaGGCTGAACTCCAGGAAGTT +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPLVWPC*AELQEV
Trigger: AACTTCCTGGAGTTCAGCCCAGCAAGGCCAGACCAA...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACCATCTAAGTCCAGATaGGAGAGGGCAAACTGCCCA +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPPSKSR*ERANCP
Trigger: TGGGCAGTTTGCCCTCTCCCATCTGGACTTAGATGG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGGCTTTGTGGGTATCTaGAAAGGTGGGGCGCAGCTT +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGGFVGI*KGGAQL
Trigger: AAGCTGCGCCCCACCTTTCCAGATACCCACAAAGCC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGTGTCTGGGGGCTTTGTaGGTATCTGGAAAGGTGGGG +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGCLGAL*VSGKVG
Trigger: CCCCACCTTTCCAGATACCCACAAAGCCCCCAGACA...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGACCCAAGCACATTCTaGAAGCCATTGCTAATAGTC +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCDPSTF*KPLLIV
Trigger: GACTATTAGCAATGGCTTCCAGAATGTGCTTGGGTC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGACAAAGTTCACGTGTTTaGCTTGCAGGAGTGTGCTCA +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRQSSRV*LAGVCS
Trigger: TGAGCACACTCCTGCAAGCCAAACACGTGAACTTTG...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAACCAGGGAGCTGTCCTaGGTGGTTGCATCCTTCATT +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPTRELS*VVASFI
Trigger: AATGAAGGATGCAACCACCCAGGACAGCTCCCTGGT...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAGGACTCTTAGCTCCATaGGGATCACTGAAGAGGCCA +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPGLLAP*GSLKRP
Trigger: TGGCCTCTTCAGTGATCCCCATGGAGCTAAGAGTCC...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGCAGGGTAGGGGCAGGTaGCCGGGCAAGCTTTTCCAC +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREQGRGR*PGKLFH
Trigger: GTGGAAAAGCTTGCCCGGCCACCTGCCCCTACCCTG...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAAACCTAGATAGTGGGTaGAAGAGTCCTGGCTCCTGG +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPNLDSG*KSPGSW
Trigger: CCAGGAGCCAGGACTCTTCCACCCACTATCTAGGTT...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAAGAGTTGAGAGCCACTaGCTTGTGCAACTCTCCACC +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPRVESH*LVQLST
Trigger: GGTGGAGAGTTGCACAAGCCAGTGGCTCTCAACTCT...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 90 bp ATAGTCTCCCACAGAGGGAAAGTTTCTACAGCTGCCCTCAGGCTGTaGCCAGTAGCACTTGCAGAGGTGAATGAGAAAACTTTCATTGGA +
Preference number: 2 (lower is better)
Translates to: IVSHRGKVSTAALRL*PVALAEVNEKTFIG
Trigger: TCCAATGAAAGTTTTCTCATTCACCTCTGCAAGTGCTACTGGCAACAGCCTGAGGGCAGCTGTAGAAACTTTCCCTCTGTGGGAGACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 90 bp CATGGGTCAAAGCTTTCTGAGGTCTCACCAGAAGCCAAGCAGATGTaGATACCTTGCTCAAACAGCCTGCAGAACTGCGAGCCAAATAAA +
Preference number: 2 (lower is better)
Translates to: HGSKLSEVSPEAKQM*IPCSNSLQNCEPNK
Trigger: TTTATTTGGCTCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGTGAGACCTCAGAAAGCTTTGACCCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 90 bp TTGTCTCCCTCAGGTCCAGGGATGGAGCAATATCGCAGTTGCACCTaGCATTCCCTGGAATATTCCTTCCTAATTAGCCTGCTCTTCTAT +
Preference number: 2 (lower is better)
Translates to: LSPSGPGMEQYRSCT*HSLEYSFLISLLFY
Trigger: ATAGAAGAGCAGGCTAATTAGGAAGGAATATTCCAGGGAATGCAAGGTGCAACTGCGATATTGCTCCATCCCTGGACCTGAGGGAGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTAAACCATTAAAGCACTaGAGACAGCCCTTTAGTGTC +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCKPLKH*RQPFSV
Trigger: GACACTAAAGGGCTGTCTTCAGTGCTTTAATGGTTT...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGCTTCTGTGGCAACCCTaGAGTCAGCCTCTTGGAACT +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGLLWQP*SQPLGT
Trigger: AGTTCCAAGAGGCTGACTTCAGGGTTGCCACAGAAG...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGAGTGCCGACGGAAACTaGGAGCACCCCAGCTCTACC +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKRESADGN*EHPSST
Trigger: GGTAGAGCTGGGGTGCTCTCAGTTTCCGTCGGCACT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTATTCATAGTAGTGGCTaGCATCTAGGAAAAGTCAGG +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCIHSSG*HLGKVR
Trigger: CCTGACTTTTCCTAGATGTCAGCCACTACTATGAAT...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGATTCATAGTAGTGGCTaGCATCTAGGAAAAGTCAGG +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEIHSSG*HLGKVR
Trigger: CCTGACTTTTCCTAGATGTCAGCCACTACTATGAAT...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTCCTCCATATTATGGCTaGAGCCTTAGTTTTACTTGT +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSPPYYG*SLSFTC
Trigger: ACAAGTAAAACTAAGGCTTCAGCCATAATATGGAGG...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGTTGCAGAGGGACCTGTaGTCCCCCAGGCTCTTGGGA +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKRELQRDL*SPRLLG
Trigger: TCCCAAGAGCCTGGGGGATCACAGGTCCCTCTGCAA...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGACTCATTTTCTGCCCTaGAGACCAGCCTCAGCTGCA +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGTHFLP*RPASAA
Trigger: TGCAGCTGAGGCTGGTCTTCAGGGCAGAAAATGAGT...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAGGACAGAATGAGGGGTaGGCTATTCCCTCTCAATTC +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPGQNEG*AIPSQF
Trigger: GAATTGAGAGGGAATAGCTCACCCCTCATTCTGTCC...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAAGGTTGCACTCAGGCTaGATTGGAGTGTTCTTTAAG +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRRLHSG*IGVFFK
Trigger: CTTAAAGAACACTCCAATTCAGCCTGAGTGCAACCT...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGACTGCTAGATTTAGGTaGAGAGCAACGTGCAAAACT +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSETARFR*RATCKT
Trigger: AGTTTTGCACGTTGCTCTTCACCTAAATCTAGCAGT...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGAGATCCCAGGACATGTaGCCACACGTGGCCAGGCCA +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKRERSQDM*PHVARP
Trigger: TGGCCTGGCCACGTGTGGTCACATGTCCTGGGATCT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTGAAGCTGAACAGTTGTaGCACTCAAATTATCATGGA +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSEAEQL*HSNYHG
Trigger: TCCATGATAATTTGAGTGTCACAACTGTTCAGCTTC...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGCCTGTTCTTGCTGTGTaGCGTGCCTGCTCCCCCTTC +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREPVLAV*RACSPF
Trigger: GAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGG...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGATTATACCTGGATGGCTaGTGGAATTCCGAGATGAAG +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRLYLDG*WNSEMK
Trigger: CTTCATCTCGGAATTCCAGCAGCCATCCAGGTATAA...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGGGGCTGGGAGTTGGCTaGCTGACAAGGAAGGCTTCC +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREGLGVG*LTRKAS
Trigger: GGAAGCCTTCCTTGTCAGGCAGCCAACTCCCAGCCC...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGAGGAAAATGCCTTCTTaGTCATCACTTGTGCTTTCC +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSERKMPS*SSLVLS
Trigger: GGAAAGCACAAGTGATGAGCAAGAAGGCATTTTCCT...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCATGCAGAGAGTCAGGTTaGACTCAGGCTGAATTGGAG +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPCRESG*TQAELE
Trigger: CTCCAATTCAGCCTGAGTGCAACCTGACTCTCTGCA...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGTTCTTTAAGGGTAATTaGCTCTCCCAGCAGGATACA +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEFFKGN*LSQQDT
Trigger: TGTATCCTGCTGGGAGAGGCAATTACCCTTAAAGAA...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGTCTTGCTCCTGTTCTTaGTGTGTGACGTGCCTGCTC +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGSCSCS*CVTCLL
Trigger: GAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGA...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACTTGGGTTGAAAGAATaGGGAGTGGAGGTGACTGTG +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPLGLKE*GVEVTV
Trigger: CACAGTCACCTCCACTCCCCATTCTTTCAACCCAAG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGTTGGTCTGGCCTTGCTaGGCTGAACTCCAGGAAGTT +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGLVWPC*AELQEV
Trigger: AACTTCCTGGAGTTCAGCCCAGCAAGGCCAGACCAA...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGGCACCCCTATGGATGTaGTTGGGTGGTTCGGGGGTC +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREAPLWM*LGGSGV
Trigger: GACCCCCGAACCACCCAACCACATCCATAGGGGTGC...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCATTGCTTCCAGGTCACTaGGAGCAAGAAGAAGGTCAC +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPLLPGH*EQEEGH
Trigger: GTGACCTTCTTCTTGCTCCCAGTGACCTGGAAGCAA...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGAAGTCACTTCCAGCTaGGGCTACATGGCATCCCTT +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGEVTSS*GYMASL
Trigger: AAGGGATGCCATGTAGCCCCAGCTGGAAGTGACTTC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAGACCCAAGCACATTCTaGAAGCCATTGCTAATAGTC +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRDPSTF*KPLLIV
Trigger: GACTATTAGCAATGGCTTCCAGAATGTGCTTGGGTC...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAGGGAGCTGTCCTGGGTaGTTGCATCCTTCATTTTCT +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPGSCPG*LHPSFS
Trigger: AGAAAATGAAGGATGCAACCACCCAGGACAGCTCCC...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTTTTGGAGAAATAGTGTaGCAAAATGACCCAATAGGG +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSFGEIV*QNDPIG
Trigger: CCCTATTGGGTCATTTTGCCACACTATTTCTCCAAA...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTATGACTATGGGCCTTTaGAGAAATAGTGTGGCAAAA +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSMTMGL*RNSVAK
Trigger: TTTTGCCACACTATTTCTCCAAAGGCCCATAGTCAT...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACCCCATGGCACTCAATaGCCTGCATGTTTCCAAAGT +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPPHGTQ*PACFQS
Trigger: ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAGGGTTTTATGTTGCCTaGGGCAGAAGGGTTAGAGAC +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPGFYVA*GRRVRD
Trigger: GTCTCTAACCCTTCTGCCCCAGGCAACATAAAACCC...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 90 bp AGCGGACACCAAAAGAGAGACTTTATCACAACTGCCTCTTGGGACTaGTGTTCAAAAAGGAGCTCCCAGTTCCTAGTGCAATTCATGGGT +
Preference number: 2 (lower is better)
Translates to: SGHQKRDFITTASWD*CSKRSSQFLVQFMG
Trigger: ACCCATGAATTGCACTAGGAACTGGGAGCTCCTTTTTGAACACAAGTCCCAAGAGGCAGTTGTGATAAAGTCTCTCTTTTGGTGTCCGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAGCGATTAGGGAAGAATaGCATCACACACGAAGAAGC +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPAIREE*HHTRRS
Trigger: GCTTCTTCGTGTGTGATGTCATTCTTCCCTAATCGC...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGCCTCCATATTATGGCTaGAGCCTTAGTTTTACTTGT +
Preference number: 2 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEPPYYG*SLSFTC
Trigger: ACAAGTAAAACTAAGGCTTCAGCCATAATATGGAGG...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAAGCATAAAATTTGTGTaGACAGGGCTGGGAGTTGGC +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPSIKFV*TGLGVG
Trigger: GCCAACTCCCAGCCCTGTTCACACAAATTTTATGCT...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAAGACAGGGCAGGTATTaGGAAAGAAGACTCATAAGA +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRRQGRY*ERRLIR
Trigger: TCTTATGAGTCTTCTTTCTCAATACCTGCCCTGTCT...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGAAGCTGAACAGTTGTaGCACTCAAATTATCATGGA +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCEAEQL*HSNYHG
Trigger: TCCATGATAATTTGAGTGTCACAACTGTTCAGCTTC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGCCCCAAATTTCATGTTaGTCTCCAGTGCTGGAGGTG +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGPQISC*SPVLEV
Trigger: CACCTCCAGCACTGGAGATCAACATGAAATTTGGGG...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGGCTTTAGAGAAACCTaGAGCCAGGGAGGAATGTCA +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGGFRET*SQGGMS
Trigger: TGACATTCCTCCCTGGCTTCAGGTTTCTCTAAAGCC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGCAGAAAGCTCATCTTTaGTGCTCCCTCGAGTCAGCA +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGQKAHL*CSLESA
Trigger: TGCTGACTCGAGGGAGCATCAAAGATGAGCTTTCTG...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAAAGTGCAACCCCAGTTaGACTCAACCTTGGGTTCTT +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPKCNPS*TQPWVL
Trigger: AAGAACCCAAGGTTGAGTGCAACTGGGGTTGCACTT...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGGAACAGAAAGCCAAGTaGCGACGGAAACTGAGAGCA +
Preference number: 2 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPEQKAK*RRKLRA
Trigger: TGCTCTCAGTTTCCGTCGGCACTTGGCTTTCTGTTC...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGAACCTGCCTCACCCCTaGCCCAAAGAAGCAGGGATG +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKRENLPHP*PKEAGM
Trigger: CATCCCTGCTTCTTTGGGGCAGGGGTGAGGCAGGTT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGAAAGTTTCTACAGCTaGCCTCAGGCTGTTGCCAGT +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGESFYS*PQAVAS
Trigger: ACTGGCAACAGCCTGAGGGCAGCTGTAGAAACTTTC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAGAAGTACTCATTTTCTaGCCTGAAGACCAGCCTCAG +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPEVLIF*PEDQPQ
Trigger: CTGAGGCTGGTCTTCAGGGCAGAAAATGAGTACTTC...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACTCTCTCTAGCAGTCTaGAGAGGAATGCATTCTCCT +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPLSLAV*RGMHSP
Trigger: AGGAGAATGCATTCCTCTGCAGACTGCTAGAGAGAG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGTGGCTTGCAGGAGTGTaGTCAACAGGCAAACCGATA +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGWLAGV*STGKPI
Trigger: TATCGGTTTGCCTGTTGAGCACACTCCTGCAAGCCA...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGAGCTTAGCAGCTTCTaGAAGGAAGGAGAGCAAGGA +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGELSSF*KEGEQG
Trigger: TCCTTGCTCTCCTTCCTTGCAGAAGCTGCTAAGCTC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACTTGCTCAAACAGCCTaGAGAACTGCGAGCCAAATA +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPLAQTA*RTASQI
Trigger: TATTTGGCTCGCAGTTCTGCAGGCTGTTTGAGCAAG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGGCTGGAGGTGGGGCCTaGTGGGAGATATTTGGGTCA +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREAGGGA*WEIFGS
Trigger: TGACCCAAATATCTCCCAGCAGGCCCCACCTCCAGC...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTTCTCTTCTTGGAATCTaGCATTGTTTCCTCCAACTT +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCSLLGI*HCFLQL
Trigger: AAGTTGGAGGAAACAATGGCAGATTCCAAGAAGAGA...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGCTCCATGACTCCAGATaGCTGGGTGTGGGTATCAAA +
Preference number: 2 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPLHDSR*LGVGIK
Trigger: TTTGATACCCACACCCAGCCATCTGGAGTCATGGAG...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGAGACAAGAAAGCTTCTaGTGGCTCGCTACTGGAAGG +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGRQESF*WLATGR
Trigger: CCTTCCAGTAGCGAGCCACCAGAAGCTTTCTTGTCT...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGGGCAGCCAAGGTCACTaGTTCCTAAGTCCGGAGGAC +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREGSQGH*FLSPED
Trigger: GTCCTCCGGACTTAGGAACCAGTGACCTTGGCTGCC...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGCAGCCTCCACACAGTTaGGCAGCCAAGGTCACTGGT +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREQPPHS*AAKVTG
Trigger: ACCAGTGACCTTGGCTGCCCAACTGTGTGGAGGCTG...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAATGCTAGATTCTGTCTaGGGGCTTTGTGGGTATCTG +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPMLDSV*GLCGYL
Trigger: CAGATACCCACAAAGCCCCCAGACAGAATCTAGCAT...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTATGACTATGGGCCTTTaGAGAAATAGTGTGGCAAAA +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCMTMGL*RNSVAK
Trigger: TTTTGCCACACTATTTCTCCAAAGGCCCATAGTCAT...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCATTGAGCAATCAGGTGTaGAGGGAAGATGGCTATGGT +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPLSNQV*REDGYG
Trigger: ACCATAGCCATCTTCCCTCCACACCTGATTGCTCAA...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGTGAGCCACCGCACCTaGTCCTTAATGCTTCTTTTC +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGVSHRT*SLMLLF
Trigger: GAAAAGAAGCATTAAGGACCAGGTGCGGTGGCTCAC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGAATTATCATGGAGACTaGGTCGGTAAGAGGCAGCCC +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGNYHGD*VGKRQP
Trigger: GGGCTGCCTCTTACCGACCCAGTCTCCATGATAATT...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTTGCATCCTTTCCACTTaGACAATAACTTCTAACAGT +
Preference number: 2 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSCILST*TITSNS
Trigger: ACTGTTAGAAGTTATTGTCCAAGTGGAAAGGATGCA...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGTGGGTGGAAGAGTCCTaGCTCCTGGGCTTTCTCCAG +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREWVEES*LLGFLQ
Trigger: CTGGAGAAAGCCCAGGAGCCAGGACTCTTCCACCCA...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGAGGGTTAGAGACTTGTaGATCCTGCAGCTGCTCTCT +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGRVRDL*ILQLLS
Trigger: AGAGAGCAGCTGCAGGATCCACAAGTCTCTAACCCT...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGGGTTTTATGTTGCCTaGGGCAGAAGGGTTAGAGAC +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGGFYVA*GRRVRD
Trigger: GTCTCTAACCCTTCTGCCCCAGGCAACATAAAACCC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 90 bp TGCCTAAGACCACACCTAAACCTCAGTTCACCAAAGTTCACGTGTTaGGCTTGCAGGAGTGTGCTCAACAGGCAAACCGATACTTTTAAA +
Preference number: 2 (lower is better)
Translates to: CLRPHLNLSSPKFTC*ACRSVLNRQTDTFK
Trigger: TTTAAAAGTATCGGTTTGCCTGTTGAGCACACTCCTGCAAGCCAAACACGTGAACTTTGGTGAACTGAGGTTTAGGTGTGGTCTTAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 90 bp TACAGACAGCGGACACCAAAAGAGAGACTTTATCACAACTGCCTCTaGGGACTTGTGTTCAAAAAGGAGCTCCCAGTTCCTAGTGCAATT +
Preference number: 2 (lower is better)
Translates to: YRQRTPKERLYHNCL*GLVFKKELPVPSAI
Trigger: AATTGCACTAGGAACTGGGAGCTCCTTTTTGAACACAAGTCCCAAGAGGCAGTTGTGATAAAGTCTCTCTTTTGGTGTCCGCTGTCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGTCAGCCTCTTGGAACTaGGGGTTGACCTCAGCAGAG +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKRESASWN*GLTSAE
Trigger: CTCTGCTGAGGTCAACCCTCAGTTCCAAGAGGCTGA...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAGTCAGTTGCAGAATCTaGAGGCCAGAAGATCTTATG +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPVSCRI*RPEDLM
Trigger: CATAAGATCTTCTGGCCTTCAGATTCTGCAACTGAC...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAGATTACTGGCTAATCTaGCTACACAAGCTTGAATTC +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRDYWLI*LHKLEF
Trigger: GAATTCAAGCTTGTGTAGTCAGATTAGCCAGTAATC...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGTGGAGGAGGGGGCTTTaGAGAATCATCCCTGGGGTT +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREWRRGL*RIIPGV
Trigger: AACCCCAGGGATGATTCTTCAAAGCCCCCTCCTCCA...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGTGGGAGTTGGCTGCCTaGCAAGGAAGGCTTCCCTAT +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREWELAA*QGRLPY
Trigger: ATAGGGAAGCCTTCCTTGTCAGGCAGCCAACTCCCA...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAAGGTTGCACTCAGGCTaGATTGGAGTGTTCTTTAAG +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPRLHSG*IGVFFK
Trigger: CTTAAAGAACACTCCAATTCAGCCTGAGTGCAACCT...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGACACCCAGACATTTCTaGAACCACTGGGTTTGCCTA +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGTPRHF*NHWVCL
Trigger: TAGGCAAACCCAGTGGTTTCAGAAATGTCTGGGTGT...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGCGCTTTATGATTCTATaGATGGGAAGTTGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGRFMIL*MGSWEG
Trigger: CCCCTCCCAACTTCCCATTCATAGAATCATAAAGCG...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTACTGTCTTTGATTTATaGCCTGAGTCTGGACTTAAA +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCTVFDL*PESGLK
Trigger: TTTAAGTCCAGACTCAGGTCATAAATCAAAGACAGT...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAGAGGACAATCCCGAGTaGCTTAGTCAAAGCAAGTAT +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPEDNPE*LSQSKY
Trigger: ATACTTGCTTTGACTAAGTCACTCGGGATTGTCCTC...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGCTTTGGGGAGGTGACTaGCTCCCTTTATTTTCACAC +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGLWGGD*LPLFSH
Trigger: GTGTGAAAATAAAGGGAGTCAGTCACCTCCCCAAAG...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACCTCCAACTTTCTCCTaGATTCTGATTCACATGACC +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPPPTFS*ILIHMT
Trigger: GGTCATGTGAATCAGAATTCAGGAGAAAGTTGGAGG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTAAAAATCCTACCCACTaGATAGAGACAAGAAAGCTT +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCKNPTH*IETRKL
Trigger: AAGCTTTCTTGTCTCTATGCAGTGGGTAGGATTTTT...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGTCCTTGGTCTGGCCTTaGTGGGCTGAACTCCAGGAA +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKRESLVWP*WAELQE
Trigger: TTCCTGGAGTTCAGCCCAGCAAGGCCAGACCAAGGA...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCATATCCCTTCAAGATCTaGTATGCCCTCCCATCTAAG +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPYPFKI*YALPSK
Trigger: CTTAGATGGGAGGGCATAGCAGATCTTGAAGGGATA...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACAGTCTGCAGAGGAATaGATTCTCCTAGATTTTCCC +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPQSAEE*ILLDFP
Trigger: GGGAAAATCTAGGAGAATGCATTCCTCTGCAGACTG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGTCTTGCTGTGTGACGTaGCTGCTCCCCCTTCACCTT +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKRESCCVT*LLPLHL
Trigger: AAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGA...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAATCGCAGTTGCACCTTaGATTCCCTGGAATATTCCT +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPIAVAP*IPWNIP
Trigger: AGGAATATTCCAGGGAATGCAAGGTGCAACTGCGAT...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGAGCAATATCGCAGTTaGACCTTGCATTCCCTGGAA +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGEQYRS*TLHSLE
Trigger: TTCCAGGGAATGCAAGGTGCAACTGCGATATTGCTC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCATCAGAGGACAGCATCTaGAGCCCTTTAAGAACTTTC +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPSEDSI*SPLRTF
Trigger: GAAAGTTCTTAAAGGGCTGCAGATGCTGTCCTCTGA...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGCAAAGTTCACGTGTTTaGCTTGCAGGAGTGTGCTCA +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGQSSRV*LAGVCS
Trigger: TGAGCACACTCCTGCAAGCCAAACACGTGAACTTTG...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGATTTGGAGAAATAGTGTaGCAAAATGACCCAATAGGG +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRFGEIV*QNDPIG
Trigger: CCCTATTGGGTCATTTTGCCACACTATTTCTCCAAA...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCATTAAGAAAAGGAGACTaGCACCTCTTCTCCTCTCTC +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPLRKGD*HLFSSL
Trigger: GAGAGAGGAGAAGAGGTGCCAGTCTCCTTTTCTTAA...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 90 bp ACTCAGGCTGAATTGGAGTGTTCTTTAAGAAAATGTTCCCTATTTTaGTGTGCCTTGGCAAACTCAGGGTGGAATGCAAGGGTTGCCATG +
Preference number: 2 (lower is better)
Translates to: TQAELECSLRKCSLF*CALANSGWNARVAM
Trigger: CATGGCAACCCTTGCATTCCACCCTGAGTTTGCCAAGGCACACAAAAATAGGGAACATTTTCTTAAAGAACACTCCAATTCAGCCTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 90 bp CCAGCAGGATACAGATGCAGAGAGTCAGGTTGCACTCAGGCTGAATaGGAGTGTTCTTTAAGAAAATGTTCCCTATTTTTGTGTGCCTTG +
Preference number: 2 (lower is better)
Translates to: PAGYRCRESGCTQAE*ECSLRKCSLFLCAL
Trigger: CAAGGCACACAAAAATAGGGAACATTTTCTTAAAGAACACTCCAATTCAGCCTGAGTGCAACCTGACTCTCTGCATCTGTATCCTGCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 90 bp CCTTTCTTGGCCAATCTAGGTCTTTCCCAGGGAGAACAACAGGGCTaGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGA +
Preference number: 2 (lower is better)
Translates to: PFLANLGLSQGEQQG*LEKQLLGRQSTLGR
Trigger: TCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTGTTGTTCTCCCTGGGAAAGACCTAGATTGGCCAAGAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGAATGGGGAGTGGAGGTaGCTGTGTGTTCATGCCTCT +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKRENGEWR*LCVHAS
Trigger: AGAGGCATGAACACACAGTCACCTCCACTCCCCATT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAGAGAATGTTCTGATTTaGGGTCTTTTAAGACAGATG +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRENVLI*GLLRQM
Trigger: CATCTGTCTTAAAAGACCTCAAATCAGAACATTCTC...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAGCTTGTTGGTGTAATTaGTCTCATTGCTCCAAACCA +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPACWCN*SHCSKP
Trigger: TGGTTTGGAGCAATGAGATCAATTACACCAACAAGC...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGCCTCCAACTTTCTCCTaGATTCTGATTCACATGACC +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGPPTFS*ILIHMT
Trigger: GGTCATGTGAATCAGAATTCAGGAGAAAGTTGGAGG...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGTTGGGAGCTTACATCTaGTCCCTCCTCCATATTATG +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGLGAYI*SLLHIM
Trigger: CATAATATGGAGGAGGGAGCAGATGTAAGCTCCCAA...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGCAGGGGTTGCAGCTCTaGAGACCTCCTGGTTATACA +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREQGLQL*RPPGYT
Trigger: TGTATAACCAGGAGGTCTGCAGAGCTGCAACCCCTG...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGTCAGAGGACAGCATCTaGAGCCCTTTAAGAACTTTC +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGSEDSI*SPLRTF
Trigger: GAAAGTTCTTAAAGGGCTGCAGATGCTGTCCTCTGA...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAAGACTTTATCACAACTaGCTCTTGGGACTTGTGTTC +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPRLYHN*LLGLVF
Trigger: GAACACAAGTCCCAAGAGGCAGTTGTGATAAAGTCT...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGACCAGGGAGCTGTCCTaGGTGGTTGCATCCTTCATT +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKRETRELS*VVASFI
Trigger: AATGAAGGATGCAACCACCCAGGACAGCTCCCTGGT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGTTAAGAAAAGGAGACTaGCACCTCTTCTCCTCTCTC +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGLRKGD*HLFSSL
Trigger: GAGAGAGGAGAAGAGGTGCCAGTCTCCTTTTCTTAA...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTACTAAGAGAAATGCTTaGCTTGTTGGTGTAATTGAT +
Preference number: 2 (lower is better)
Translates to: KAGTAQHSASLISHLKGCTKRNA*LVGVID
Trigger: ATCAATTACACCAACAAGCCAAGCATTTCTCTTAGT...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCATCTTGTGGGTGGGACTaGAAAAACCTCATTCTTTGT +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPSCGWD*KNLILC
Trigger: ACAAAGAATGAGGTTTTTCCAGTCCCACCCACAAGA...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGAGTCTATGCCCGGCATaGGGGTTGTGCTCAACTGAT +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKRESLCPA*GLCSTD
Trigger: ATCAGTTGAGCACAACCCCCATGCCGGGCATAGACT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGACAGAGCCTTTCGTGTaGATCAGACTGATGGGCAGC +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKRETEPFV*IRLMGS
Trigger: GCTGCCCATCAGTCTGATCCACACGAAAGGCTCTGT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGAACCTAGATAGTGGGTaGAAGAGTCCTGGCTCCTGG +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKRENLDSG*KSPGSW
Trigger: CCAGGAGCCAGGACTCTTCCACCCACTATCTAGGTT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 90 bp GGGAAACTGCTAGATTTAGGTGAAGAGCAACGTGCAAAACTGTCTTaGATTTATGACCTGAGTCTGGACTTAAACCGAGTACGAGGCATT +
Preference number: 2 (lower is better)
Translates to: GKLLDLGEEQRAKLS*IYDLSLDLNRVRGI
Trigger: AATGCCTCGTACTCGGTTTAAGTCCAGACTCAGGTCATAAATCAAAGACAGTTTTGCACGTTGCTCTTCACCTAAATCTAGCAGTTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGACTTGGAATGGTGTTaGAAACAGATCCTTGGATTC +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGDLEWC*KQILGF
Trigger: GAATCCAAGGATCTGTTTTCAACACCATTCCAAGTC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAGATTACTGGCTAATCTaGCTACACAAGCTTGAATTC +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPDYWLI*LHKLEF
Trigger: GAATTCAAGCTTGTGTAGTCAGATTAGCCAGTAATC...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGCAAACTCTGAGCTCCTaGAGTCTAAGGAATGCCGCT +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREQTLSS*SLRNAA
Trigger: AGCGGCATTCCTTAGACTTCAGGAGCTCAGAGTTTG...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGGGACAGAATGAGGGGTaGGCTATTCCCTCTCAATTC +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREGQNEG*AIPSQF
Trigger: GAATTGAGAGGGAATAGCTCACCCCTCATTCTGTCC...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGGATGTGTGACGTGCTaGAGTCTAAAAGTTTCATCT +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGGCVTC*SLKVSS
Trigger: AGATGAAACTTTTAGACTTCAGCACGTCACACATCC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGCCCCAAATTTCATGTTaGTCTCCAGTGCTGGAGGTG +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREPQISC*SPVLEV
Trigger: CACCTCCAGCACTGGAGATCAACATGAAATTTGGGG...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGTTCATGCCTCTCTCTTaGTCTCTCACCATTATACCT +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGFMPLS*SLTIIP
Trigger: AGGTATAATGGTGAGAGAGCAAGAGAGAGGCATGAA...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAGATGTATTAATATTCTaGATTTGGACCGGTTCTAGT +
Preference number: 2 (lower is better)
Translates to: TRSQADVDTLLKQPAELRDVLIF*IWTGSS
Trigger: ACTAGAACCGGTCCAAATGCAGAATATTAATACATC...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGAGGAAAATGCCTTCTTaGTCATCACTTGTGCTTTCC +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGRKMPS*SSLVLS
Trigger: GGAAAGCACAAGTGATGAGCAAGAAGGCATTTTCCT...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGTTCTTTAAGGGTAATTaGCTCTCCCAGCAGGATACA +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGFFKGN*LSQQDT
Trigger: TGTATCCTGCTGGGAGAGGCAATTACCCTTAAAGAA...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGTGGCTTGCAGGAGTGTaGTCAACAGGCAAACCGATA +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREWLAGV*STGKPI
Trigger: TATCGGTTTGCCTGTTGAGCACACTCCTGCAAGCCA...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGCCTACTCCTGCACAGTaGCTAATCTCTCTGCCAATG +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREPTPAQ*LISLPM
Trigger: CATTGGCAGAGAGATTAGCCACTGTGCAGGAGTAGG...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGGGGAGCTGTCCTGGGTaGTTGCATCCTTCATTTTCT +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREGSCPG*LHPSFS
Trigger: AGAAAATGAAGGATGCAACCACCCAGGACAGCTCCC...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGATCACAACTGCCTCTTaGGACTTGTGTTCAAAAAGG +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGITTAS*DLCSKR
Trigger: CCTTTTTGAACACAAGTCCCAAGAGGCAGTTGTGAT...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 90 bp GAATTGGAGTGTTCTTTAAGAAAATGTTCCCTATTTTTGTGTGCCTaGGCAAACTCAGGGTGGAATGCAAGGGTTGCCATGGTAATATCC +
Preference number: 2 (lower is better)
Translates to: ELECSLRKCSLFLCA*ANSGWNARVAMVIS
Trigger: GGATATTACCATGGCAACCCTTGCATTCCACCCTGAGTTTGCCAAGGCACACAAAAATAGGGAACATTTTCTTAAAGAACACTCCAATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 90 bp CTCCCTTTATTTTCACACTTGCCAAGACAGACAGAAAGCTCATCTTaGATGCTCCCTCGAGTCAGCAAGTCCTTAGAGAATAAACAAAAC +
Preference number: 2 (lower is better)
Translates to: LPLFSHLPRQTESSS*MLPRVSKSLENKQN
Trigger: GTTTTGTTTATTCTCTAAGGACTTGCTGACTCGAGGGAGCATCAAAGATGAGCTTTCTGTCTGTCTTGGCAAGTGTGAAAATAAAGGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGACTTGCAGAGGTGAATaGGAAAACTTTCATTGGAGA +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGTCRGE*ENFHWR
Trigger: TCTCCAATGAAAGTTTTCTCATTCACCTCTGCAAGT...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGACACCCAGACATTTCTaGAACCACTGGGTTTGCCTA +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKRETPRHF*NHWVCL
Trigger: TAGGCAAACCCAGTGGTTTCAGAAATGTCTGGGTGT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGCGCTTTATGATTCTATaGATGGGAAGTTGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKRERFMIL*MGSWEG
Trigger: CCCCTCCCAACTTCCCATTCATAGAATCATAAAGCG...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGATTGGAGACCTTGGGTaGTCCAAGTCTGAAAAGGCA +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREIGDLG*SKSEKA
Trigger: TGCCTTTTCAGACTTGGAGCACCCAAGGTCTCCAAT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGCTCTCTCTAGCAGTCTaGAGAGGAATGCATTCTCCT +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKRELSLAV*RGMHSP
Trigger: AGGAGAATGCATTCCTCTGCAGACTGCTAGAGAGAG...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGTCTCTTCTTGGAATCTaGCATTGTTTCCTCCAACTT +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGSLLGI*HCFLQL
Trigger: AAGTTGGAGGAAACAATGGCAGATTCCAAGAAGAGA...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGATGCTAGATTCTGTCTaGGGGCTTTGTGGGTATCTG +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREMLDSV*GLCGYL
Trigger: CAGATACCCACAAAGCCCCCAGACAGAATCTAGCAT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGCAAAGTTCACGTGTTTaGCTTGCAGGAGTGTGCTCA +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREQSSRV*LAGVCS
Trigger: TGAGCACACTCCTGCAAGCCAAACACGTGAACTTTG...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGATGACTATGGGCCTTTaGAGAAATAGTGTGGCAAAA +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGMTMGL*RNSVAK
Trigger: TTTTGCCACACTATTTCTCCAAAGGCCCATAGTCAT...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGTTGAGCAATCAGGTGTaGAGGGAAGATGGCTATGGT +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKRELSNQV*REDGYG
Trigger: ACCATAGCCATCTTCCCTCCACACCTGATTGCTCAA...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGGGACTGTCTTGTGGGTaGGACTGGAAAAACCTCATT +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREGLSCG*DWKNLI
Trigger: AATGAGGTTTTTCCAGTCCCACCCACAAGACAGTCC...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGGTCAGTTGCAGAATCTaGAGGCCAGAAGATCTTATG +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREVSCRI*RPEDLM
Trigger: CATAAGATCTTCTGGCCTTCAGATTCTGCAACTGAC...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGGAGGACAATCCCGAGTaGCTTAGTCAAAGCAAGTAT +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREEDNPE*LSQSKY
Trigger: ATACTTGCTTTGACTAAGTCACTCGGGATTGTCCTC...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAGATGTATTAATATTCTaGATTTGGACCGGTTCTAGT +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPDVLIF*IWTGSS
Trigger: ACTAGAACCGGTCCAAATGCAGAATATTAATACATC...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGGTGGAATGCAAGGGTTaGCATGGTAATATCCCTCTT +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREVECKG*HGNIPL
Trigger: AAGAGGGATATTACCATGGCAACCCTTGCATTCCAC...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGAACATATACTGGAAGTaGTGTTATAGTGGCCAGAAA +
Preference number: 2 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGNIYWK*CYSGQK
Trigger: TTTCTGGCCACTATAACAGCACTTCCAGTATATGTT...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGTTAAGAAAAGGAGACTaGCACCTCTTCTCCTCTCTC +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKRELRKGD*HLFSSL
Trigger: GAGAGAGGAGAAGAGGTGCCAGTCTCCTTTTCTTAA...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAACTAAGAGAAATGCTTaGCTTGTTGGTGTAATTGAT +
Preference number: 2 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPTKRNA*LVGVID
Trigger: ATCAATTACACCAACAAGCCAAGCATTTCTCTTAGT...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGAAACCATTAAAGCACTaGAGACAGCCCTTTAGTGTC +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREKPLKH*RQPFSV
Trigger: GACACTAAAGGGCTGTCTTCAGTGCTTTAATGGTTT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGAGACAGGGCAGGTATTaGGAAAGAAGACTCATAAGA +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKRERQGRY*ERRLIR
Trigger: TCTTATGAGTCTTCTTTCTCAATACCTGCCCTGTCT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGGGATGTGTGACGTGCTaGAGTCTAAAAGTTTCATCT +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKREGCVTC*SLKVSS
Trigger: AGATGAAACTTTTAGACTTCAGCACGTCACACATCC...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGTCTCTCGAGACCCTATaGAGAGTCCCAAATGAATAT +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKRESLETL*RVPNEY
Trigger: ATATTCATTTGGGACTCTTCATAGGGTCTCGAGAGA...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR GCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGAGGAAAATGCCTTCTTaGTCATCACTTGTGCTTTCC +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKRERKMPS*SSLVLS
Trigger: GGAAAGCACAAGTGATGAGCAAGAAGGCATTTTCCT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGACTTGCAGAGGTGAATaGGAAAACTTTCATTGGAGA +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKRETCRGE*ENFHWR
Trigger: TCTCCAATGAAAGTTTTCTCATTCACCTCTGCAAGT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGTGCATCCTTTCCACTTaGACAATAACTTCTAACAGT +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKRECILST*TITSNS
Trigger: ACTGTTAGAAGTTATTGTCCAAGTGGAAAGGATGCA...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGACTAAGAGAAATGCTTaGCTTGTTGGTGTAATTGAT +
Preference number: 2 (lower is better)
Translates to: NIHQFALFHLQTADTKRETKRNA*LVGVID
Trigger: ATCAATTACACCAACAAGCCAAGCATTTCTCTTAGT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 72 bp TGTGTGGAGGAAGAGTCTGCCCGCACGGCATGCACATaGGCGGTGAGCTGCAACACAGTGTGGCTGGCGGGA +
Preference number: 3 (lower is better)
Translates to: CVEEESARTACT*AVSCNTVWLAG
Trigger: TCCCGCCAGCCACACTGTGTTGCAGCTCACCGCGCATGTGCATGCCGTGCGGGCAGACTCTTCCTCCACACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 72 bp GTCTGCTGTGTGGAGGAAGAGTCTGCCCGCACGGCATaGACATGCGCGGTGAGCTGCAACACAGTGTGGCTG +
Preference number: 3 (lower is better)
Translates to: VCCVEEESARTA*TCAVSCNTVWL
Trigger: CAGCCACACTGTGTTGCAGCTCACCGCGCATGTGCATGCCGTGCGGGCAGACTCTTCCTCCACACAGCAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCCTGGGGAGGGTGGGCTaGCTTCCAGGTCACTGGGAG +
Preference number: 3 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSLGRVG*LPGHWE
Trigger: CTCCCAGTGACCTGGAAGCAAGCCCACCCTCCCCAG...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 72 bp TCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGAGTCTaGCCGCACGGCATGCACATGCGCGGTGAGCTGCAA +
Preference number: 3 (lower is better)
Translates to: SIGPCLLCGGRV*PHGMHMRGELQ
Trigger: TTGCAGCTCACCGCGCATGTGCATGCCGTGCGGGCAGACTCTTCCTCCACACAGCAGACACGGACCTATGGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATAGGGGGAAAGGCAGGTaGCTGCCTCCTTGGTCTGGC +
Preference number: 3 (lower is better)
Translates to: THVPSLMTATITATPPPHRGKGR*LPPWSG
Trigger: GCCAGACCAAGGAGGCAGCAACCTGCCTTTCCCCCT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 72 bp TGGTCTGGCCTTGCTGGGCTGAACTCCAGGAAGTTTTaGAGAGGGACCTGTGATCCCCCAGGCTCTTGGGAG +
Preference number: 3 (lower is better)
Translates to: WSGLAGLNSRKF*RGTCDPPGSWE
Trigger: CTCCCAAGAGCCTGGGGGATCACAGGTCCCTCTGCAAAACTTCCTGGAGTTCAGCCCAGCAAGGCCAGACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 72 bp GGGGAAAGGCAGGTTGCTGCCTCCTTGGTCTGGCCTTaGTGGGCTGAACTCCAGGAAGTTTTGCAGAGGGAC +
Preference number: 3 (lower is better)
Translates to: GERQVAASLVWP*WAELQEVLQRD
Trigger: GTCCCTCTGCAAAACTTCCTGGAGTTCAGCCCAGCAAGGCCAGACCAAGGAGGCAGCAACCTGCCTTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 72 bp ACGTGGTGGGTCTCCATGACTCCAGATGGCTGGGTGTaGGTATCAAAACCTCACCGCCAGTCCCAGTCCCCT +
Preference number: 3 (lower is better)
Translates to: TWWVSMTPDGWV*VSKPHRQSQSP
Trigger: AGGGGACTGGGACTGGCGGTGAGGTTTTGATACCCACACCCAGCCATCTGGAGTCATGGAGACCCACCACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 72 bp GGGCAGGTAAGGGGGAAAGGCAGGTTGCTGCCTCCTTaGTCTGGCCTTGCTGGGCTGAACTCCAGGAAGTTT +
Preference number: 3 (lower is better)
Translates to: GQVRGKGRLLPP*SGLAGLNSRKF
Trigger: AAACTTCCTGGAGTTCAGCCCAGCAAGGCCAGACCAAGGAGGCAGCAACCTGCCTTTCCCCCTTACCTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 72 bp ACAGTAAACACAGATCCCAGGACATGTGACCACACGTaGCCAGGCCAGCCCAAACCAGGGAGCTGTCCTGGG +
Preference number: 3 (lower is better)
Translates to: TVNTDPRTCDHT*PGQPKPGSCPG
Trigger: CCCAGGACAGCTCCCTGGTTTGGGCTGGCCTGGCCACGTGTGGTCACATGTCCTGGGATCTGTGTTTACTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGCCTGAAGTCAGCCTCTaGGAACTGAGGGTTGACCTC +
Preference number: 3 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWPEVSL*ELRVDL
Trigger: GAGGTCAACCCTCAGTTCCAAGAGGCTGACTTCAGG...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTCAGGTTGCTGCCTCCTaGGTCTGGCCTTGCTGGGCT +
Preference number: 3 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSQVAAS*VWPCWA
Trigger: AGCCCAGCAAGGCCAGACCAAGGAGGCAGCAACCTG...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGGATGTTCTTCAGGGGTaGCAGCTCTGCAGACCTCCT +
Preference number: 3 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWDVLQG*QLCRPP
Trigger: AGGAGGTCTGCAGAGCTGCAACCCCTGAAGAACATC...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 72 bp CCAGGGTGCAAGTCACCGGGACAAACTCTGAGCTCCTaGAGTCTAAGGAATGCCGCTAGCTCAGGGCCGTCT +
Preference number: 3 (lower is better)
Translates to: PGCKSPGQTLSS*SLRNAASSGPS
Trigger: AGACGGCCCTGAGCTAGCGGCATTCCTTAGACTTCAGGAGCTCAGAGTTTGTCCCGGTGACTTGCACCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 72 bp GAGCAAGGACACAGTAAACACAGATCCCAGGACATGTaGCCACACGTGGCCAGGCCAGCCCAAACCAGGGAG +
Preference number: 3 (lower is better)
Translates to: EQGHSKHRSQDM*PHVARPAQTRE
Trigger: CTCCCTGGTTTGGGCTGGCCTGGCCACGTGTGGTCACATGTCCTGGGATCTGTGTTTACTGTGTCCTTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 72 bp CATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTaGAGGAAGAGTCTGCCCGCACGGCATGCACATGCG +
Preference number: 3 (lower is better)
Translates to: HPSIVHRSVSAV*RKSLPARHAHA
Trigger: CGCATGTGCATGCCGTGCGGGCAGACTCTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 72 bp CGGCATAGAGACGTGGTGGGTCTCCATGACTCCAGATaGCTGGGTGTGGGTATCAAAACCTCACCGCCAGTC +
Preference number: 3 (lower is better)
Translates to: RHRDVVGLHDSR*LGVGIKTSPPV
Trigger: GACTGGCGGTGAGGTTTTGATACCCACACCCAGCCATCTGGAGTCATGGAGACCCACCACGTCTCTATGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 72 bp CACTCAGCCTCCACACAGTTGGGCAGCCAAGGTCACTaGTTCCTAAGTCCGGAGGACAGAATGAGGGGTGAG +
Preference number: 3 (lower is better)
Translates to: HSASTQLGSQGH*FLSPEDRMRGE
Trigger: CTCACCCCTCATTCTGTCCTCCGGACTTAGGAACCAGTGACCTTGGCTGCCCAACTGTGTGGAGGCTGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATCCTGAAGTCAGCCTCTaGGAACTGAGGGTTGACCTC +
Preference number: 3 (lower is better)
Translates to: THVPSLMTATITATPPPHPEVSL*ELRVDL
Trigger: GAGGTCAACCCTCAGTTCCAAGAGGCTGACTTCAGG...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTCAGGTTGCTGCCTCCTaGGTCTGGCCTTGCTGGGCT +
Preference number: 3 (lower is better)
Translates to: KAGTAQHSASLISHLKGCQVAAS*VWPCWA
Trigger: AGCCCAGCAAGGCCAGACCAAGGAGGCAGCAACCTG...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGCCCCTATGGATGTGGTaGGGTGGTTCGGGGGTCAGG +
Preference number: 3 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEPLWMW*GGSGVR
Trigger: CCTGACCCCCGAACCACCCAACCACATCCATAGGGG...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATATGGAGGAGGGGGCTTaGAAGAATCATCCCTGGGGT +
Preference number: 3 (lower is better)
Translates to: THVPSLMTATITATPPPHMEEGA*KNHPWG
Trigger: ACCCCAGGGATGATTCTTCAAAGCCCCCTCCTCCAT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCATGGAGGAGGGGGCTTaGAAGAATCATCCCTGGGGT +
Preference number: 3 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSMEEGA*KNHPWG
Trigger: ACCCCAGGGATGATTCTTCAAAGCCCCCTCCTCCAT...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGGTTCACGTGTTTGGCTaGCAGGAGTGTGCTCAACAG +
Preference number: 3 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWVHVFG*QECAQQ
Trigger: CTGTTGAGCACACTCCTGCAAGCCAAACACGTGAAC...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTCCCCTTCTGGGGCAGTaGAGCAATCAGGTGTGGAGG +
Preference number: 3 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSPLLGQ*SNQVWR
Trigger: CCTCCACACCTGATTGCTCAACTGCCCCAGAAGGGG...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATTGCCCGGCATGGGGGTaGTGCTCAACTGATGAACTA +
Preference number: 3 (lower is better)
Translates to: THVPSLMTATITATPPPHCPAWG*CSTDEL
Trigger: TAGTTCATCAGTTGAGCACAACCCCCATGCCGGGCA...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 72 bp TGGGCTGAACTCCAGGAAGTTTTGCAGAGGGACCTGTaGTCCCCCAGGCTCTTGGGAGCTTACATCTGCTCC +
Preference number: 3 (lower is better)
Translates to: WAELQEVLQRDL*SPRLLGAYICS
Trigger: GGAGCAGATGTAAGCTCCCAAGAGCCTGGGGGATCACAGGTCCCTCTGCAAAACTTCCTGGAGTTCAGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 72 bp ATAGAGACGTGGTGGGTCTCCATGACTCCAGATGGCTaGGTGTGGGTATCAAAACCTCACCGCCAGTCCCAG +
Preference number: 3 (lower is better)
Translates to: IETWWVSMTPDG*VWVSKPHRQSQ
Trigger: CTGGGACTGGCGGTGAGGTTTTGATACCCACACCCAGCCATCTGGAGTCATGGAGACCCACCACGTCTCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 72 bp GGAAGTCACTTCCAGCTGGGGCTACATGGCATCCCTTaGGCATGGGAGACCAGGACCTTCTGGAATCTTCAG +
Preference number: 3 (lower is better)
Translates to: GSHFQLGLHGIP*AWETRTFWNLQ
Trigger: CTGAAGATTCCAGAAGGTCCTGGTCTCCCATGCCCAAGGGATGCCATGTAGCCCCAGCTGGAAGTGACTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCCTGTTGACCCTTGGGTaGAAAGAATGGGGAGTGGAG +
Preference number: 3 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSLLTLG*KEWGVE
Trigger: CTCCACTCCCCATTCTTTCAACCCAAGGGTCAACAG...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGGCAGAGAGTCTCCTGTaGACCCTTGGGTTGAAAGAA +
Preference number: 3 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWAESLL*TLGLKE
Trigger: TTCTTTCAACCCAAGGGTCAACAGGAGACTCTCTGC...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGACCCCTATGGATGTGGTaGGGTGGTTCGGGGGTCAGG +
Preference number: 3 (lower is better)
Translates to: TRSQADVDTLLKQPAELRPLWMW*GGSGVR
Trigger: CCTGACCCCCGAACCACCCAACCACATCCATAGGGG...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGTCTAACCCTCACCTCTaGAAGGGTCTCTGTTCTCCA +
Preference number: 3 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWSNPHL*KGLCSP
Trigger: TGGAGAACAGAGACCCTTCAAGAGGTGAGGGTTAGA...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGCTACATGGCATCCCTaGGGCATGGGAGACCAGGAC +
Preference number: 3 (lower is better)
Translates to: KAGTAQHSASLISHLKGCATWHP*GMGDQD
Trigger: GTCCTGGTCTCCCATGCCCAAGGGATGCCATGTAGC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCGTTCACGTGTTTGGCTaGCAGGAGTGTGCTCAACAG +
Preference number: 3 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSVHVFG*QECAQQ
Trigger: CTGTTGAGCACACTCCTGCAAGCCAAACACGTGAAC...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCCCAAAGTTCACGTGTTaGGCTTGCAGGAGTGTGCTC +
Preference number: 3 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSPKFTC*ACRSVL
Trigger: GAGCACACTCCTGCAAGCCAAACACGTGAACTTTGG...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGAGCTGTCCTGGGTGGTaGCATCCTTCATTTTCTGTC +
Preference number: 3 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWSCPGW*HPSFSV
Trigger: GACAGAAAATGAAGGATGCAACCACCCAGGACAGCT...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGCCCCTTCTGGGGCAGTaGAGCAATCAGGTGTGGAGG +
Preference number: 3 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEPLLGQ*SNQVWR
Trigger: CCTCCACACCTGATTGCTCAACTGCCCCAGAAGGGG...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGCTCTTCTCCTCTCTCTaGCTCCTGTTCTTGCTGTGT +
Preference number: 3 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWLFSSL*LLFLLC
Trigger: ACACAGCAAGAACAGGAGCAAGAGAGAGGAGAAGAG...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATTTTCCTTGGAGAGAGTaGAGAGCCACTGGCTTGTGC +
Preference number: 3 (lower is better)
Translates to: THVPSLMTATITATPPPHFPWRE*RATGLC
Trigger: GCACAAGCCAGTGGCTCTCAACTCTCTCCAAGGAAA...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 72 bp GGCTCTAGGAACAGAAAGCCAAGTGCCGACGGAAACTaGGAGCACCCCAGCTCTACCAATGGCAGTCCTCTA +
Preference number: 3 (lower is better)
Translates to: GSRNRKPSADGN*EHPSSTNGSPL
Trigger: TAGAGGACTGCCATTGGTAGAGCTGGGGTGCTCTCAGTTTCCGTCGGCACTTGGCTTTCTGTTCCTAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 72 bp TCTCCTCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTaGCTGCTCCCCCTTCACCTTCCACCATGGGTCAAA +
Preference number: 3 (lower is better)
Translates to: SPLSCSCSCCVT*LLPLHLPPWVK
Trigger: TTTGACCCATGGTGGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGAGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 72 bp AAGAGATGGGTGAGTCTATGCCCGGCATGGGGGTTGTaGTCAACTGATGAACTACCCCAAGGTCAGGGTAGG +
Preference number: 3 (lower is better)
Translates to: KRWVSLCPAWGL*STDELPQGQGR
Trigger: CCTACCCTGACCTTGGGGTAGTTCATCAGTTGAGCACAACCCCCATGCCGGGCATAGACTCACCCATCTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGCAGTTGCACTCAACCTaGGGTTCTTTACTGAACGGT +
Preference number: 3 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWQLHST*GSLLNG
Trigger: ACCGTTCAGTAAAGAACCCAAGGTTGAGTGCAACTG...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTCTGTTGACCCTTGGGTaGAAAGAATGGGGAGTGGAG +
Preference number: 3 (lower is better)
Translates to: ESCSLSRKQDGGASPELLLLTLG*KEWGVE
Trigger: CTCCACTCCCCATTCTTTCAACCCAAGGGTCAACAG...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTCCTGAAGTCAGCCTCTaGGAACTGAGGGTTGACCTC +
Preference number: 3 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSPEVSL*ELRVDL
Trigger: GAGGTCAACCCTCAGTTCCAAGAGGCTGACTTCAGG...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGCTTTCATTGGAGACCTaGGGTGCTCCAAGTCTGAAA +
Preference number: 3 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWLSLET*GAPSLK
Trigger: TTTCAGACTTGGAGCACCCAAGGTCTCCAATGAAAG...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATCCCCCAAATTTCATGTaGATCTCCAGTGCTGGAGGT +
Preference number: 3 (lower is better)
Translates to: THVPSLMTATITATPPPHPPNFM*ISSAGG
Trigger: ACCTCCAGCACTGGAGATCAACATGAAATTTGGGGG...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 72 bp TCTTCTGTGGCAACCCTGAAGTCAGCCTCTTGGAACTaGGGGTTGACCTCAGCAGAGAGTCTCCTGTTGACC +
Preference number: 3 (lower is better)
Translates to: SSVATLKSASWN*GLTSAESLLLT
Trigger: GGTCAACAGGAGACTCTCTGCTGAGGTCAACCCTCAGTTCCAAGAGGCTGACTTCAGGGTTGCCACAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 72 bp GAGAGCCACTGGCTTGTGCAACTCTCCACCAGGAGCTaGCAGGATCCTTTCTTGGCCAATCTAGGTCTTTCC +
Preference number: 3 (lower is better)
Translates to: ESHWLVQLSTRS*QDPFLANLGLS
Trigger: GGAAAGACCTAGATTGGCCAAGAAAGGATCCTGTCAGCTCCTGGTGGAGAGTTGCACAAGCCAGTGGCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 72 bp TACGATCACAGCGACCCCTCCTCCCCATCCAACAGTTaGCAGTTCACCAACCCAATGCCTGGACAGACTTTC +
Preference number: 3 (lower is better)
Translates to: YDHSDPSSPSNS*QFTNPMPGQTF
Trigger: GAAAGTCTGTCCAGGCATTGGGTTGGTGAACTGTCAACTGTTGGATGGGGAGGAGGGGTCGCTGTGATCGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 72 bp CAAAGCTGGGAGAAAGGCTCTCTGCAGGTTCCAAAATaGTGGTGCGGGATGGGCTCTAGGAACAGAAAGCCA +
Preference number: 3 (lower is better)
Translates to: QSWEKGSLQVPK*WCGMGSRNRKP
Trigger: TGGCTTTCTGTTCCTAGAGCCCATCCCGCACCAGCATTTTGGAACCTGCAGAGAGCCTTTCTCCCAGCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 72 bp AGGGTTGACCTCAGCAGAGAGTCTCCTGTTGACCCTTaGGTTGAAAGAATGGGGAGTGGAGGTGACTGTGTG +
Preference number: 3 (lower is better)
Translates to: RVDLSRESPVDP*VERMGSGGDCV
Trigger: CACACAGTCACCTCCACTCCCCATTCTTTCAACCCAAGGGTCAACAGGAGACTCTCTGCTGAGGTCAACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 72 bp GACCTTAACTTACAAAGGTCATCCGGCATAGAGACGTaGTGGGTCTCCATGACTCCAGATGGCTGGGTGTGG +
Preference number: 3 (lower is better)
Translates to: DLNLQRSSGIET*WVSMTPDGWVW
Trigger: CCACACCCAGCCATCTGGAGTCATGGAGACCCACCACGTCTCTATGCCGGATGACCTTTGTAAGTTAAGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 72 bp AGGAAAGGAATCCTGCAGCCTTTCCAGAAAACAGGATaGCGGCGCCTCTCCAGAACTCCTTTTCCTCCCTAC +
Preference number: 3 (lower is better)
Translates to: RKGILQPFQKTG*RRLSRTPFPPY
Trigger: GTAGGGAGGAAAAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTCCTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 72 bp ACCAGCCTGCTCTTGAAATGCACAGAGCCTTTCGTGTaGATCAGACTGATGGGCAGCCCCATGGCACTCAAT +
Preference number: 3 (lower is better)
Translates to: TSLLLKCTEPFV*IRLMGSPMALN
Trigger: ATTGAGTGCCATGGGGCTGCCCATCAGTCTGATCCACACGAAAGGCTCTGTGCATTTCAAGAGCAGGCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTCTGTTGACCCTTGGGTaGAAAGAATGGGGAGTGGAG +
Preference number: 3 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSLLTLG*KEWGVE
Trigger: CTCCACTCCCCATTCTTTCAACCCAAGGGTCAACAG...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGCTGAAAATGAGTCAGTaGCAGAATCTGAAGGCCAGA +
Preference number: 3 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWLKMSQ*QNLKAR
Trigger: TCTGGCCTTCAGATTCTGCAACTGACTCATTTTCAG...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACAGGTTGCTGCCTCCTaGGTCTGGCCTTGCTGGGCT +
Preference number: 3 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPQVAAS*VWPCWA
Trigger: AGCCCAGCAAGGCCAGACCAAGGAGGCAGCAACCTG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACCCCTATGGATGTGGTaGGGTGGTTCGGGGGTCAGG +
Preference number: 3 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPPLWMW*GGSGVR
Trigger: CCTGACCCCCGAACCACCCAACCACATCCATAGGGG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCTTGGGAGGGGCATTATaGTCAAAAGCAGCTGTCCAT +
Preference number: 3 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSLGGAL*SKAAVH
Trigger: ATGGACAGCTGCTTTTGACAATAATGCCCCTCCCAA...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGATGTTCTTCAGGGGTaGCAGCTCTGCAGACCTCCT +
Preference number: 3 (lower is better)
Translates to: KAGTAQHSASLISHLKGCDVLQG*QLCRPP
Trigger: AGGAGGTCTGCAGAGCTGCAACCCCTGAAGAACATC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCGCAGATGTTGATACCTaGCTCAAACAGCCTGCAGAA +
Preference number: 3 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSADVDT*LKQPAE
Trigger: TTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGC...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 72 bp CCCATCACACCTGAGGAAAAGAGATGGGTGAGTCTATaGCCGGCATGGGGGTTGTGCTCAACTGATGAACTA +
Preference number: 3 (lower is better)
Translates to: PITPEEKRWVSL*PAWGLCSTDEL
Trigger: TAGTTCATCAGTTGAGCACAACCCCCATGCCGGGCATAGACTCACCCATCTCTTTTCCTCAGGTGTGATGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 72 bp AAGCCATTGCTAATAGTCCCGATGCTAGATTCTGTCTaGGGGCTTTGTGGGTATCTGGAAAGGTGGGGCGCA +
Preference number: 3 (lower is better)
Translates to: KPLLIVPMLDSV*GLCGYLERWGA
Trigger: TGCGCCCCACCTTTCCAGATACCCACAAAGCCCCCAGACAGAATCTAGCATCGGGACTATTAGCAATGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTCAGTTGCACTCAACCTaGGGTTCTTTACTGAACGGT +
Preference number: 3 (lower is better)
Translates to: ESCSLSRKQDGGASPELLQLHST*GSLLNG
Trigger: ACCGTTCAGTAAAGAACCCAAGGTTGAGTGCAACTG...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGCTGTTGACCCTTGGGTaGAAAGAATGGGGAGTGGAG +
Preference number: 3 (lower is better)
Translates to: QWPACFQSRPAIQRRPSELLTLG*KEWGVE
Trigger: CTCCACTCCCCATTCTTTCAACCCAAGGGTCAACAG...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTGCAGAGAGTCTCCTGTaGACCCTTGGGTTGAAAGAA +
Preference number: 3 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSAESLL*TLGLKE
Trigger: TTCTTTCAACCCAAGGGTCAACAGGAGACTCTCTGC...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTCTTTCATTGGAGACCTaGGGTGCTCCAAGTCTGAAA +
Preference number: 3 (lower is better)
Translates to: ESCSLSRKQDGGASPELLLSLET*GAPSLK
Trigger: TTTCAGACTTGGAGCACCCAAGGTCTCCAATGAAAG...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTTCTAACCCTCACCTCTaGAAGGGTCTCTGTTCTCCA +
Preference number: 3 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSSNPHL*KGLCSP
Trigger: TGGAGAACAGAGACCCTTCAAGAGGTGAGGGTTAGA...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGTTCTGTCTGGGGGCTTaGTGGGTATCTGGAAAGGTG +
Preference number: 3 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEFCLGA*WVSGKV
Trigger: CACCTTTCCAGATACCCACAAAGCCCCCAGACAGAA...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTTTCTGTCTGGGGGCTTaGTGGGTATCTGGAAAGGTG +
Preference number: 3 (lower is better)
Translates to: KAGTAQHSASLISHLKGCFCLGA*WVSGKV
Trigger: CACCTTTCCAGATACCCACAAAGCCCCCAGACAGAA...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGGTTCACGTGTTTGGCTaGCAGGAGTGTGCTCAACAG +
Preference number: 3 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEVHVFG*QECAQQ
Trigger: CTGTTGAGCACACTCCTGCAAGCCAAACACGTGAAC...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTCCCCCAAATTTCATGTaGATCTCCAGTGCTGGAGGT +
Preference number: 3 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSPPNFM*ISSAGG
Trigger: ACCTCCAGCACTGGAGATCAACATGAAATTTGGGGG...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGGGAGCAATATCGCAGTaGCACCTTGCATTCCCTGGA +
Preference number: 3 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEGAISQ*HLAFPG
Trigger: TCCAGGGAATGCAAGGTGCAACTGCGATATTGCTCC...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATAGTACCGTCCACACTTaGAGTTCTTTCTTCTGCTCT +
Preference number: 3 (lower is better)
Translates to: THVPSLMTATITATPPPHSTVHT*SSFFCS
Trigger: AGAGCAGAAGAAAGAACTCAAAGTGTGGACGGTACT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTTCTAACCCTCACCTCTaGAAGGGTCTCTGTTCTCCA +
Preference number: 3 (lower is better)
Translates to: KAGTAQHSASLISHLKGCSNPHL*KGLCSP
Trigger: TGGAGAACAGAGACCCTTCAAGAGGTGAGGGTTAGA...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATAAGGAAAATGCCTTCTaGCTCATCACTTGTGCTTTC +
Preference number: 3 (lower is better)
Translates to: THVPSLMTATITATPPPHKENAF*LITCAF
Trigger: GAAAGCACAAGTGATGAGCAAGAAGGCATTTTCCTT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGAAATGTTCCCTATTTTaGTGTGCCTTGGCAAACTCA +
Preference number: 3 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWKCSLF*CALANS
Trigger: TGAGTTTGCCAAGGCACACAAAAATAGGGAACATTT...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGTGGAGGCTTAATATCTaGTTTGCCTTCCAAGATGAT +
Preference number: 3 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWWRLNI*FAFQDD
Trigger: ATCATCTTGGAAGGCAAACAAGATATTAAGCCTCCA...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTCTGAAACCACTGGGTTaGCCTAAGACCACACCTAAA +
Preference number: 3 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSLKPLG*PKTTPK
Trigger: TTTAGGTGTGGTCTTAGGCAAACCCAGTGGTTTCAG...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTTTGGGAGGGGCATTATaGTCAAAAGCAGCTGTCCAT +
Preference number: 3 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSLGGAL*SKAAVH
Trigger: ATGGACAGCTGCTTTTGACAATAATGCCCCTCCCAA...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATCGTGCAAAACTGTCTTaGATTTATGACCTGAGTCTG +
Preference number: 3 (lower is better)
Translates to: THVPSLMTATITATPPPHRAKLS*IYDLSL
Trigger: CAGACTCAGGTCATAAATCAAAGACAGTTTTGCACG...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTCTCTTCTCCTCTCTCTaGCTCCTGTTCTTGCTGTGT +
Preference number: 3 (lower is better)
Translates to: KAGTAQHSASLISHLKGCLFSSL*LLFLLC
Trigger: ACACAGCAAGAACAGGAGCAAGAGAGAGGAGAAGAG...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATTGCCTTGGAGACGTTTaGAACAGTATTGTCATGTCT +
Preference number: 3 (lower is better)
Translates to: THVPSLMTATITATPPPHCLGDV*NSIVMS
Trigger: AGACATGACAATACTGTTCAAAACGTCTCCAAGGCA...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTTTTCAGAGGACTGTCTaGTGGGTGGGACTGGAAAAA +
Preference number: 3 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSFQRTV*WVGLEK
Trigger: TTTTTCCAGTCCCACCCACAAGACAGTCCTCTGAAA...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTGCGAGAAACACTAGTTaGAAAGCCAACCCATCACAC +
Preference number: 3 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSARNTS*KANPSH
Trigger: GTGTGATGGGTTGGCTTTCAAACTAGTGTTTCTCGC...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 72 bp TGCAACCCCAGTTGCACTCAACCTTGGGTTCTTTACTaGACGGTTCCATCGTCCGCATCCATCCATAGTCCA +
Preference number: 3 (lower is better)
Translates to: CNPSCTQPWVLY*TVPSSASIHSP
Trigger: TGGACTATGGATGGATGCGGACGATGGAACCGTTCAGTAAAGAACCCAAGGTTGAGTGCAACTGGGGTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 72 bp TCACTGGTTCCTAAGTCCGGAGGACAGAATGAGGGGTaGGCTATTCCCTCTCAATTCCTGCGGAAGTCACTT +
Preference number: 3 (lower is better)
Translates to: SLVPKSGGQNEG*AIPSQFLRKSL
Trigger: AAGTGACTTCCGCAGGAATTGAGAGGGAATAGCTCACCCCTCATTCTGTCCTCCGGACTTAGGAACCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 72 bp AGCTTTCTGAGGTCTCACCAGAAGCCAAGCAGATGTTaGTACCTTGCTCAAACAGCCTGCAGAACTGCGAGC +
Preference number: 3 (lower is better)
Translates to: SFLRSHQKPSRC*YLAQTACRTAS
Trigger: GCTCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGTGAGACCTCAGAAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 72 bp ATTCATAGTCTCCCACAGAGGGAAAGTTTCTACAGCTaGCCTCAGGCTGTTGCCAGTAGCACTTGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: IHSLPQRESFYS*PQAVASSTCRG
Trigger: ACCTCTGCAAGTGCTACTGGCAACAGCCTGAGGGCAGCTGTAGAAACTTTCCCTCTGTGGGAGACTATGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 72 bp GATTCTCCCCTTCTGGGGCAGTTGAGCAATCAGGTGTaGAGGGAAGATGGCTATGGTAAGGCCTTTAGGTTA +
Preference number: 3 (lower is better)
Translates to: DSPLLGQLSNQV*REDGYGKAFRL
Trigger: TAACCTAAAGGCCTTACCATAGCCATCTTCCCTCCACACCTGATTGCTCAACTGCCCCAGAAGGGGAGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGCAGTTGCACTCAACCTaGGGTTCTTTACTGAACGGT +
Preference number: 3 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEQLHST*GSLLNG
Trigger: ACCGTTCAGTAAAGAACCCAAGGTTGAGTGCAACTG...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATAATAAAGACCTGAGCTaGGAAAAGTACAAAGGGAAC +
Preference number: 3 (lower is better)
Translates to: THVPSLMTATITATPPPHNKDLS*EKYKGN
Trigger: GTTCCCTTTGTACTTTTCCAAGCTCAGGTCTTTATT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGATCTAACCCTCACCTCTaGAAGGGTCTCTGTTCTCCA +
Preference number: 3 (lower is better)
Translates to: TRSQADVDTLLKQPAELRSNPHL*KGLCSP
Trigger: TGGAGAACAGAGACCCTTCAAGAGGTGAGGGTTAGA...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGCTGGGGAGGGTGGGCTaGCTTCCAGGTCACTGGGAG +
Preference number: 3 (lower is better)
Translates to: NIHQFALFHLQTADTKRELGRVG*LPGHWE
Trigger: CTCCCAGTGACCTGGAAGCAAGCCCACCCTCCCCAG...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTACATTCTGGAAGCCATaGCTAATAGTCCCGATGCTA +
Preference number: 3 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSTFWKP*LIVPML
Trigger: TAGCATCGGGACTATTAGCAATGGCTTCCAGAATGT...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGTTGGGAGGGGCATTATaGTCAAAAGCAGCTGTCCAT +
Preference number: 3 (lower is better)
Translates to: QWPACFQSRPAIQRRPSELGGAL*SKAAVH
Trigger: ATGGACAGCTGCTTTTGACAATAATGCCCCTCCCAA...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAAGCTGTCCTGGGTGGTaGCATCCTTCATTTTCTGTC +
Preference number: 3 (lower is better)
Translates to: TRSQADVDTLLKQPAELRSCPGW*HPSFSV
Trigger: GACAGAAAATGAAGGATGCAACCACCCAGGACAGCT...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAGATGTTCTTCAGGGGTaGCAGCTCTGCAGACCTCCT +
Preference number: 3 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPDVLQG*QLCRPP
Trigger: AGGAGGTCTGCAGAGCTGCAACCCCTGAAGAACATC...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGGCAGATGTTGATACCTaGCTCAAACAGCCTGCAGAA +
Preference number: 3 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEADVDT*LKQPAE
Trigger: TTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGC...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTTTTCAGAGGACTGTCTaGTGGGTGGGACTGGAAAAA +
Preference number: 3 (lower is better)
Translates to: KAGTAQHSASLISHLKGCFQRTV*WVGLEK
Trigger: TTTTTCCAGTCCCACCCACAAGACAGTCCTCTGAAA...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCATGCCCGGCATGGGGGTaGTGCTCAACTGATGAACTA +
Preference number: 3 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPCPAWG*CSTDEL
Trigger: TAGTTCATCAGTTGAGCACAACCCCCATGCCGGGCA...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCATTGAGAGCCACTGGCTaGTGCAACTCTCCACCAGGA +
Preference number: 3 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPLRATG*CNSPPG
Trigger: TCCTGGTGGAGAGTTGCACAAGCCAGTGGCTCTCAA...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 72 bp GATATGAGAGCTGCCAAGCTCCAATCGTCCTGGCCATaGTCAATCCCCAGCTGTGCTTCTATTTACACCCAA +
Preference number: 3 (lower is better)
Translates to: DMRAAKLQSSWP*SIPSCASIYTQ
Trigger: TTGGGTGTAAATAGAAGCACAGCTGGGGATTGATCATGGCCAGGACGATTGGAGCTTGGCAGCTCTCATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 72 bp CTGTCCTGGGTGGTTGCATCCTTCATTTTCTGTCCATaGCCTCATAGGGCCTCAGGGAAACTGCTAGATTTA +
Preference number: 3 (lower is better)
Translates to: LSWVVASFIFCP*PHRASGKLLDL
Trigger: TAAATCTAGCAGTTTCCCTGAGGCCCTATGAGGGCATGGACAGAAAATGAAGGATGCAACCACCCAGGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 72 bp AATTTTCCTTGGAGAGAGTTGAGAGCCACTGGCTTGTaGAACTCTCCACCAGGAGCTGACAGGATCCTTTCT +
Preference number: 3 (lower is better)
Translates to: NFPWRELRATGL*NSPPGADRILS
Trigger: AGAAAGGATCCTGTCAGCTCCTGGTGGAGAGTTGCACAAGCCAGTGGCTCTCAACTCTCTCCAAGGAAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGCTGAAAATGAGTCAGTaGCAGAATCTGAAGGCCAGA +
Preference number: 3 (lower is better)
Translates to: QWPACFQSRPAIQRRPSELKMSQ*QNLKAR
Trigger: TCTGGCCTTCAGATTCTGCAACTGACTCATTTTCAG...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGATGGAGGAGGGGGCTTaGAAGAATCATCCCTGGGGT +
Preference number: 3 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGMEEGA*KNHPWG
Trigger: ACCCCAGGGATGATTCTTCAAAGCCCCCTCCTCCAT...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTACATTCTGGAAGCCATaGCTAATAGTCCCGATGCTA +
Preference number: 3 (lower is better)
Translates to: KAGTAQHSASLISHLKGCTFWKP*LIVPML
Trigger: TAGCATCGGGACTATTAGCAATGGCTTCCAGAATGT...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGACTGAAACCACTGGGTTaGCCTAAGACCACACCTAAA +
Preference number: 3 (lower is better)
Translates to: TRSQADVDTLLKQPAELRLKPLG*PKTTPK
Trigger: TTTAGGTGTGGTCTTAGGCAAACCCAGTGGTTTCAG...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTTCTATGAATGGGAAGTaGGGAGGGGCATTATTGTCA +
Preference number: 3 (lower is better)
Translates to: KAGTAQHSASLISHLKGCSMNGK*GGALLS
Trigger: TGACAATAATGCCCCTCCCAACTTCCCATTCATAGA...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTCGTGCAAAACTGTCTTaGATTTATGACCTGAGTCTG +
Preference number: 3 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSRAKLS*IYDLSL
Trigger: CAGACTCAGGTCATAAATCAAAGACAGTTTTGCACG...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTTGCCTTGGAGACGTTTaGAACAGTATTGTCATGTCT +
Preference number: 3 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSCLGDV*NSIVMS
Trigger: AGACATGACAATACTGTTCAAAACGTCTCCAAGGCA...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAGGAGCAATATCGCAGTaGCACCTTGCATTCCCTGGA +
Preference number: 3 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPGAISQ*HLAFPG
Trigger: TCCAGGGAATGCAAGGTGCAACTGCGATATTGCTCC...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATATACACCAATTTGCATaGTTTCATTTACAGACAGCG +
Preference number: 3 (lower is better)
Translates to: THVPSLMTATITATPPPHIHQFA*FHLQTA
Trigger: CGCTGTCTGTAAATGAAACAATGCAAATTGGTGTAT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 72 bp GAAAACTTTCATTGGAGACCTTGGGTGCTCCAAGTCTaGAAAGGCAGTAGGGAGAAAGCTGAGCAGGAAGAC +
Preference number: 3 (lower is better)
Translates to: ENFHWRPWVLQV*KGSREKAEQED
Trigger: GTCTTCCTGCTCAGCTTTCTCCCTACTGCCTTTTCAGACTTGGAGCACCCAAGGTCTCCAATGAAAGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 72 bp AAAAAGGAGCTCCCAGTTCCTAGTGCAATTCATGGGTaGAATCCAGACCCTCTCAGTAGGGAGCATTCACTC +
Preference number: 3 (lower is better)
Translates to: KKELPVPSAIHG*NPDPLSREHSL
Trigger: GAGTGAATGCTCCCTACTGAGAGGGTCTGGATTTCACCCATGAATTGCACTAGGAACTGGGAGCTCCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 72 bp AAGGCAGAGATACCACCCAGATTCTTTAAGGGTAATTaGCTCTCCCAGCAGGATACAGATGCAGAGAGTCAG +
Preference number: 3 (lower is better)
Translates to: KAEIPPRFFKGN*LSQQDTDAESQ
Trigger: CTGACTCTCTGCATCTGTATCCTGCTGGGAGAGGCAATTACCCTTAAAGAATCTGGGTGGTATCTCTGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 72 bp GAGGTCTCACCAGAAGCCAAGCAGATGTTGATACCTTaGTCAAACAGCCTGCAGAACTGCGAGCCAAATAAA +
Preference number: 3 (lower is better)
Translates to: EVSPEAKQMLIP*SNSLQNCEPNK
Trigger: TTTATTTGGCTCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGTGAGACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 72 bp GCTCCAATCGTCCTGGCCATGATCAATCCCCAGCTGTaGTTCTATTTACACCCAACATATTGGGGGCAATAT +
Preference number: 3 (lower is better)
Translates to: APIVLAMINPQL*FYLHPTYWGQY
Trigger: ATATTGCCCCCAATATGTTGGGTGTAAATAGAAGCACAGCTGGGGATTGATCATGGCCAGGACGATTGGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 72 bp TCTCCAGAACTCCTTTTCCTCCCTACTCCTGCACAGTaGCTAATCTCTCTGCCAATGAAATCTAACCCTCAC +
Preference number: 3 (lower is better)
Translates to: SPELLFLPTPAQ*LISLPMKSNPH
Trigger: GTGAGGGTTAGATTTCATTGGCAGAGAGATTAGCCACTGTGCAGGAGTAGGGAGGAAAAGGAGTTCTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 72 bp TTTAAGAACTTTCTTTGTCTCCCTCAGGTCCAGGGATaGAGCAATATCGCAGTTGCACCTTGCATTCCCTGG +
Preference number: 3 (lower is better)
Translates to: FKNFLCLPQVQG*SNIAVAPCIPW
Trigger: CCAGGGAATGCAAGGTGCAACTGCGATATTGCTCCATCCCTGGACCTGAGGGAGACAAAGAAAGTTCTTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGGCTACATGGCATCCCTaGGGCATGGGAGACCAGGAC +
Preference number: 3 (lower is better)
Translates to: NIHQFALFHLQTADTKREATWHP*GMGDQD
Trigger: GTCCTGGTCTCCCATGCCCAAGGGATGCCATGTAGC...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGAAGGAAAATGCCTTCTaGCTCATCACTTGTGCTTTC +
Preference number: 3 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEKENAF*LITCAF
Trigger: GAAAGCACAAGTGATGAGCAAGAAGGCATTTTCCTT...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAACATTCTGGAAGCCATaGCTAATAGTCCCGATGCTA +
Preference number: 3 (lower is better)
Translates to: TRSQADVDTLLKQPAELRTFWKP*LIVPML
Trigger: TAGCATCGGGACTATTAGCAATGGCTTCCAGAATGT...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTAAATGTTCCCTATTTTaGTGTGCCTTGGCAAACTCA +
Preference number: 3 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSKCSLF*CALANS
Trigger: TGAGTTTGCCAAGGCACACAAAAATAGGGAACATTT...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGCCAAAGTTCACGTGTTaGGCTTGCAGGAGTGTGCTC +
Preference number: 3 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGPKFTC*ACRSVL
Trigger: GAGCACACTCCTGCAAGCCAAACACGTGAACTTTGG...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGCCCCTTCTGGGGCAGTaGAGCAATCAGGTGTGGAGG +
Preference number: 3 (lower is better)
Translates to: NIHQFALFHLQTADTKREPLLGQ*SNQVWR
Trigger: CCTCCACACCTGATTGCTCAACTGCCCCAGAAGGGG...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTTGCCTTGGAGACGTTTaGAACAGTATTGTCATGTCT +
Preference number: 3 (lower is better)
Translates to: KAGTAQHSASLISHLKGCCLGDV*NSIVMS
Trigger: AGACATGACAATACTGTTCAAAACGTCTCCAAGGCA...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAACTGCCTCTTGGGACTaGTGTTCAAAAAGGAGCTCC +
Preference number: 3 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPTASWD*CSKRSS
Trigger: GGAGCTCCTTTTTGAACACAAGTCCCAAGAGGCAGT...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACAGTTGCACTCAACCTaGGGTTCTTTACTGAACGGT +
Preference number: 3 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPQLHST*GSLLNG
Trigger: ACCGTTCAGTAAAGAACCCAAGGTTGAGTGCAACTG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGAATAAAGACCTGAGCTaGGAAAAGTACAAAGGGAAC +
Preference number: 3 (lower is better)
Translates to: QWPACFQSRPAIQRRPSENKDLS*EKYKGN
Trigger: GTTCCCTTTGTACTTTTCCAAGCTCAGGTCTTTATT...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAAAGGAAAATGCCTTCTaGCTCATCACTTGTGCTTTC +
Preference number: 3 (lower is better)
Translates to: TRSQADVDTLLKQPAELRKENAF*LITCAF
Trigger: GAAAGCACAAGTGATGAGCAAGAAGGCATTTTCCTT...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTTGGAGGCTTAATATCTaGTTTGCCTTCCAAGATGAT +
Preference number: 3 (lower is better)
Translates to: KAGTAQHSASLISHLKGCWRLNI*FAFQDD
Trigger: ATCATCTTGGAAGGCAAACAAGATATTAAGCCTCCA...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACTGAAACCACTGGGTTaGCCTAAGACCACACCTAAA +
Preference number: 3 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPLKPLG*PKTTPK
Trigger: TTTAGGTGTGGTCTTAGGCAAACCCAGTGGTTTCAG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCATTGGGAGGGGCATTATaGTCAAAAGCAGCTGTCCAT +
Preference number: 3 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPLGGAL*SKAAVH
Trigger: ATGGACAGCTGCTTTTGACAATAATGCCCCTCCCAA...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCATATCGCAGTTGCACCTaGCATTCCCTGGAATATTCC +
Preference number: 3 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPYRSCT*HSLEYS
Trigger: GGAATATTCCAGGGAATGCAAGGTGCAACTGCGATA...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGACTGCCTCTTGGGACTaGTGTTCAAAAAGGAGCTCC +
Preference number: 3 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGTASWD*CSKRSS
Trigger: GGAGCTCCTTTTTGAACACAAGTCCCAAGAGGCAGT...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 72 bp GAGGTGAATGAGAAAACTTTCATTGGAGACCTTGGGTaGTCCAAGTCTGAAAAGGCAGTAGGGAGAAAGCTG +
Preference number: 3 (lower is better)
Translates to: EVNEKTFIGDLG*SKSEKAVGRKL
Trigger: CAGCTTTCTCCCTACTGCCTTTTCAGACTTGGAGCACCCAAGGTCTCCAATGAAAGTTTTCTCATTCACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 72 bp TCAGGGAAAAACAGGAAAGTATATCCCTTCAAGATCTaGTATGCCCTCCCATCTAAGTCCAGATGGGAGAGG +
Preference number: 3 (lower is better)
Translates to: SGKNRKVYPFKI*YALPSKSRWER
Trigger: CCTCTCCCATCTGGACTTAGATGGGAGGGCATAGCAGATCTTGAAGGGATATACTTTCCTGTTTTTCCCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 72 bp CCTCTCCCAGCAGGATACAGATGCAGAGAGTCAGGTTaGACTCAGGCTGAATTGGAGTGTTCTTTAAGAAAA +
Preference number: 3 (lower is better)
Translates to: PLPAGYRCRESG*TQAELECSLRK
Trigger: TTTTCTTAAAGAACACTCCAATTCAGCCTGAGTGCAACCTGACTCTCTGCATCTGTATCCTGCTGGGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 72 bp TCTTTTAAGACAGATGTTCTTCAGGGGTTGCAGCTCTaGAGACCTCCTGGTTATACAACCAGGATGTGTGAC +
Preference number: 3 (lower is better)
Translates to: SFKTDVLQGLQL*RPPGYTTRMCD
Trigger: GTCACACATCCTGGTTGTATAACCAGGAGGTCTGCAGAGCTGCAACCCCTGAAGAACATCTGTCTTAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 72 bp AGACAGCGGACACCAAAAGAGAGACTTTATCACAACTaGCTCTTGGGACTTGTGTTCAAAAAGGAGCTCCCA +
Preference number: 3 (lower is better)
Translates to: RQRTPKERLYHN*LLGLVFKKELP
Trigger: TGGGAGCTCCTTTTTGAACACAAGTCCCAAGAGGCAGTTGTGATAAAGTCTCTCTTTTGGTGTCCGCTGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 72 bp CCTCCCCATCCAACAGTTGACAGTTCACCAACCCAATaGCTGGACAGACTTTCTGAGTCTAATTTTTCTCCA +
Preference number: 3 (lower is better)
Translates to: PPHPTVDSSPTQ*LDRLSESNFSP
Trigger: TGGAGAAAAATTAGACTCAGAAAGTCTGTCCAGGCATTGGGTTGGTGAACTGTCAACTGTTGGATGGGGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 72 bp TTTGTCAGATCAGTCACGTGGGACCCAAGCACATTCTaGAAGCCATTGCTAATAGTCCCGATGCTAGATTCT +
Preference number: 3 (lower is better)
Translates to: FVRSVTWDPSTF*KPLLIVPMLDS
Trigger: AGAATCTAGCATCGGGACTATTAGCAATGGCTTCCAGAATGTGCTTGGGTCCCACGTGACTGATCTGACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 72 bp GGGAAAAAGAACAAGAATCTAGGGTTTTATGTTGCCTaGGGCAGAAGGGTTAGAGACTTGTGGATCCTGCAG +
Preference number: 3 (lower is better)
Translates to: GKKNKNLGFYVA*GRRVRDLWILQ
Trigger: CTGCAGGATCCACAAGTCTCTAACCCTTCTGCCCCAGGCAACATAAAACCCTAGATTCTTGTTCTTTTTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGCCTGAAGTCAGCCTCTaGGAACTGAGGGTTGACCTC +
Preference number: 3 (lower is better)
Translates to: NIHQFALFHLQTADTKREPEVSL*ELRVDL
Trigger: GAGGTCAACCCTCAGTTCCAAGAGGCTGACTTCAGG...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACTGAAAATGAGTCAGTaGCAGAATCTGAAGGCCAGA +
Preference number: 3 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPLKMSQ*QNLKAR
Trigger: TCTGGCCTTCAGATTCTGCAACTGACTCATTTTCAG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAAGACTTGGAATGGTGTaGAAAACAGATCCTTGGATT +
Preference number: 3 (lower is better)
Translates to: TRSQADVDTLLKQPAELRRLGMV*KTDPWI
Trigger: AATCCAAGGATCTGTTTTCAACACCATTCCAAGTCT...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGCTTTCATTGGAGACCTaGGGTGCTCCAAGTCTGAAA +
Preference number: 3 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGLSLET*GAPSLK
Trigger: TTTCAGACTTGGAGCACCCAAGGTCTCCAATGAAAG...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGCAGATGTTGATACCTaGCTCAAACAGCCTGCAGAA +
Preference number: 3 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGADVDT*LKQPAE
Trigger: TTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGCGAGAAACACTAGTTaGAAAGCCAACCCATCACAC +
Preference number: 3 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGARNTS*KANPSH
Trigger: GTGTGATGGGTTGGCTTTCAAACTAGTGTTTCTCGC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGTATCGCAGTTGCACCTaGCATTCCCTGGAATATTCC +
Preference number: 3 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGYRSCT*HSLEYS
Trigger: GGAATATTCCAGGGAATGCAAGGTGCAACTGCGATA...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAAGTACCGTCCACACTTaGAGTTCTTTCTTCTGCTCT +
Preference number: 3 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPSTVHT*SSFFCS
Trigger: AGAGCAGAAGAAAGAACTCAAAGTGTGGACGGTACT...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTATACACCAATTTGCATaGTTTCATTTACAGACAGCG +
Preference number: 3 (lower is better)
Translates to: KAGTAQHSASLISHLKGCIHQFA*FHLQTA
Trigger: CGCTGTCTGTAAATGAAACAATGCAAATTGGTGTAT...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 72 bp TGTTCCCTATTTTTGTGTGCCTTGGCAAACTCAGGGTaGAATGCAAGGGTTGCCATGGTAATATCCCTCTTT +
Preference number: 3 (lower is better)
Translates to: CSLFLCALANSG*NARVAMVISLF
Trigger: AAAGAGGGATATTACCATGGCAACCCTTGCATTCCACCCTGAGTTTGCCAAGGCACACAAAAATAGGGAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 72 bp GGACACCAAAAGAGAGACTTTATCACAACTGCCTCTTaGGACTTGTGTTCAAAAAGGAGCTCCCAGTTCCTA +
Preference number: 3 (lower is better)
Translates to: GHQKRDFITTAS*DLCSKRSSQFL
Trigger: TAGGAACTGGGAGCTCCTTTTTGAACACAAGTCCCAAGAGGCAGTTGTGATAAAGTCTCTCTTTTGGTGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGGAAGTGCAACCCCAGTaGCACTCAACCTTGGGTTCT +
Preference number: 3 (lower is better)
Translates to: NIHQFALFHLQTADTKREEVQPQ*HSTLGS
Trigger: AGAACCCAAGGTTGAGTGCAACTGGGGTTGCACTTC...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGCTGAAAATGAGTCAGTaGCAGAATCTGAAGGCCAGA +
Preference number: 3 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGLKMSQ*QNLKAR
Trigger: TCTGGCCTTCAGATTCTGCAACTGACTCATTTTCAG...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGTCTATGAATGGGAAGTaGGGAGGGGCATTATTGTCA +
Preference number: 3 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGSMNGK*GGALLS
Trigger: TGACAATAATGCCCCTCCCAACTTCCCATTCATAGA...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACGTGCAAAACTGTCTTaGATTTATGACCTGAGTCTG +
Preference number: 3 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPRAKLS*IYDLSL
Trigger: CAGACTCAGGTCATAAATCAAAGACAGTTTTGCACG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGGGAGCAATATCGCAGTaGCACCTTGCATTCCCTGGA +
Preference number: 3 (lower is better)
Translates to: NIHQFALFHLQTADTKREGAISQ*HLAFPG
Trigger: TCCAGGGAATGCAAGGTGCAACTGCGATATTGCTCC...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACCTTTATTTTCACACTaGCCAAGACAGACAGAAAGC +
Preference number: 3 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPPLFSH*PRQTES
Trigger: GCTTTCTGTCTGTCTTGGCAAGTGTGAAAATAAAGG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 72 bp GGGAGCTTACATCTGCTCCCTCCTCCATATTATGGCTaGAGCCTTAGTTTTACTTGTGCTCATCAGGAATAT +
Preference number: 3 (lower is better)
Translates to: GSLHLLPPPYYG*SLSFTCAHQEY
Trigger: ATATTCCTGATGAGCACAAGTAAAACTAAGGCTTCAGCCATAATATGGAGGAGGGAGCAGATGTAAGCTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 72 bp GACCTCCTGGTTATACAACCAGGATGTGTGACGTGCTaGAGTCTAAAAGTTTCATCTCAGTTCATCTGTACC +
Preference number: 3 (lower is better)
Translates to: DLLVIQPGCVTC*SLKVSSQFICT
Trigger: GGTACAGATGAACTGAGATGAAACTTTTAGACTTCAGCACGTCACACATCCTGGTTGTATAACCAGGAGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 72 bp GGGATCACTGAAGAGGCCAATGAGAATGTTCTGATTTaGGGTCTTTTAAGACAGATGTTCTTCAGGGGTTGC +
Preference number: 3 (lower is better)
Translates to: GITEEANENVLI*GLLRQMFFRGC
Trigger: GCAACCCCTGAAGAACATCTGTCTTAAAAGACCTCAAATCAGAACATTCTCATTGGCCTCTTCAGTGATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 72 bp CTCTCTCTTGCTCTCTCACCATTATACCTGGATGGCTaGTGGAATTCCGAGATGAAGATGAAGTTTTTCTCT +
Preference number: 3 (lower is better)
Translates to: LSLALSPLYLDG*WNSEMKMKFFS
Trigger: AGAGAAAAACTTCATCTTCATCTCGGAATTCCAGCAGCCATCCAGGTATAATGGTGAGAGAGCAAGAGAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR GCA 72 bp GTTCACCAAAGTTCACGTGTTTGGCTTGCAGGAGTGTaGTCAACAGGCAAACCGATACTTTTAAAGATTGGA +
Preference number: 3 (lower is better)
Translates to: VHQSSRVWLAGV*STGKPILLKIG
Trigger: TCCAATCTTTAAAAGTATCGGTTTGCCTGTTGAGCACACTCCTGCAAGCCAAACACGTGAACTTTGGTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 72 bp CCCATCCAACAGTTGACAGTTCACCAACCCAATGCCTaGACAGACTTTCTGAGTCTAATTTTTCTCCAAAGT +
Preference number: 3 (lower is better)
Translates to: PIQQLTVHQPNA*TDFLSLIFLQS
Trigger: ACTTTGGAGAAAAATTAGACTCAGAAAGTCTGTCCAGGCATTGGGTTGGTGAACTGTCAACTGTTGGATGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGGCAGAGAGTCTCCTGTaGACCCTTGGGTTGAAAGAA +
Preference number: 3 (lower is better)
Translates to: NIHQFALFHLQTADTKREAESLL*TLGLKE
Trigger: TTCTTTCAACCCAAGGGTCAACAGGAGACTCTCTGC...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGCTCTTCTCCTCTCTCTaGCTCCTGTTCTTGCTGTGT +
Preference number: 3 (lower is better)
Translates to: NIHQFALFHLQTADTKRELFSSL*LLFLLC
Trigger: ACACAGCAAGAACAGGAGCAAGAGAGAGGAGAAGAG...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGCCCCCAAATTTCATGTaGATCTCCAGTGCTGGAGGT +
Preference number: 3 (lower is better)
Translates to: NIHQFALFHLQTADTKREPPNFM*ISSAGG
Trigger: ACCTCCAGCACTGGAGATCAACATGAAATTTGGGGG...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGTATCACAACTGCCTCTaGGGACTTGTGTTCAAAAAG +
Preference number: 3 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGYHNCL*GLVFKK
Trigger: CTTTTTGAACACAAGTCCCAAGAGGCAGTTGTGATA...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGAATAAACAAAACCTCTaGCCTGCAAGCTGTGACACA +
Preference number: 3 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGNKQNL*PASCDT
Trigger: TGTGTCACAGCTTGCAGGCAAGAGGTTTTGTTTATT...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGCTTTCATTGGAGACCTaGGGTGCTCCAAGTCTGAAA +
Preference number: 3 (lower is better)
Translates to: NIHQFALFHLQTADTKRELSLET*GAPSLK
Trigger: TTTCAGACTTGGAGCACCCAAGGTCTCCAATGAAAG...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGTGGAGGCTTAATATCTaGTTTGCCTTCCAAGATGAT +
Preference number: 3 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGWRLNI*FAFQDD
Trigger: ATCATCTTGGAAGGCAAACAAGATATTAAGCCTCCA...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGCTGAAACCACTGGGTTaGCCTAAGACCACACCTAAA +
Preference number: 3 (lower is better)
Translates to: NIHQFALFHLQTADTKRELKPLG*PKTTPK
Trigger: TTTAGGTGTGGTCTTAGGCAAACCCAGTGGTTTCAG...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGTATCGCAGTTGCACCTaGCATTCCCTGGAATATTCC +
Preference number: 3 (lower is better)
Translates to: NIHQFALFHLQTADTKREYRSCT*HSLEYS
Trigger: GGAATATTCCAGGGAATGCAAGGTGCAACTGCGATA...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 72 bp AGGATACAGATGCAGAGAGTCAGGTTGCACTCAGGCTaGATTGGAGTGTTCTTTAAGAAAATGTTCCCTATT +
Preference number: 3 (lower is better)
Translates to: RIQMQRVRLHSG*IGVFFKKMFPI
Trigger: AATAGGGAACATTTTCTTAAAGAACACTCCAATTCAGCCTGAGTGCAACCTGACTCTCTGCATCTGTATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGTATCACAACTGCCTCTaGGGACTTGTGTTCAAAAAG +
Preference number: 3 (lower is better)
Translates to: NIHQFALFHLQTADTKREYHNCL*GLVFKK
Trigger: CTTTTTGAACACAAGTCCCAAGAGGCAGTTGTGATA...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 72 bp AGGAAAAGTCAGGAAATTACAGACTTGGAATGGTGTTaGAAACAGATCCTTGGATTCAGTTCTCTTCCCCAA +
Preference number: 3 (lower is better)
Translates to: RKSQEITDLEWC*KQILGFSSLPQ
Trigger: TTGGGGAAGAGAACTGAATCCAAGGATCTGTTTTCAACACCATTCCAAGTCTGTAATTTCCTGACTTTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 72 bp GTTTTGAACAGTATTGTCATGTCTCTCGAGACCCTATaGAGAGTCCCAAATGAATATGAAGGAGAAACCACA +
Preference number: 3 (lower is better)
Translates to: VLNSIVMSLETL*RVPNEYEGETT
Trigger: TGTGGTTTCTCCTTCATATTCATTTGGGACTCTTCATAGGGTCTCGAGAGACATGACAATACTGTTCAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGAGACTTGGAATGGTGTaGAAAACAGATCCTTGGATT +
Preference number: 3 (lower is better)
Translates to: NIHQFALFHLQTADTKRERLGMV*KTDPWI
Trigger: AATCCAAGGATCTGTTTTCAACACCATTCCAAGTCT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR-3UTR CAA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGAATAAAGACCTGAGCTaGGAAAAGTACAAAGGGAAC +
Preference number: 3 (lower is better)
Translates to: NIHQFALFHLQTADTKRENKDLS*EKYKGN
Trigger: GTTCCCTTTGTACTTTTCCAAGCTCAGGTCTTTATT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 72 bp AGTGTGCTCAACAGGCAAACCGATACTTTTAAAGATTaGAGGCTTAATATCTTGTTTGCCTTCCAAGATGAT +
Preference number: 3 (lower is better)
Translates to: SVLNRQTDTFKD*RLNILFAFQDD
Trigger: ATCATCTTGGAAGGCAAACAAGATATTAAGCCTCCAATCTTTAAAAGTATCGGTTTGCCTGTTGAGCACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR TCA 72 bp GAAGGCCAGAAGATCTTATGTGAAAATACAGTCGTTTaGTCTCTCCATCTTTCCATTTTGGATTGCATTTCT +
Preference number: 3 (lower is better)
Translates to: EGQKILCENTVV*SLHLSILDCIS
Trigger: AGAAATGCAATCCAAAATGGAAAGATGGAGAGATCAAACGACTGTATTTTCACATAAGATCTTCTGGCCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CCA 72 bp AGCAGAAATCATCAACTAATACTGAATGAGAGAAAATaGGATGCTAATGAGGTAAATGGGAAGATGGTGATT +
Preference number: 3 (lower is better)
Translates to: SRNHQLILNERK*DANEVNGKMVI
Trigger: AATCACCATCTTCCCATTTACCTCATTAGCATCCCATTTTCTCTCATTCAGTATTAGTTGATGATTTCTGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCGGTGAGGGGTGCAGCTaGAGACCGCCAGGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSGEGCS*RPPGLH
Trigger: GTGCAGCCCTGGCGGTCTTCAGCTGCACCCCTCACC...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGTCTTTTCCCTCTTGCTaGGCCGGGGCTCCGCAGCCC +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWSFPSC*AGAPQP
Trigger: GGGCTGCGGAGCCCCGGCCCAGCAAGAGGGAAAAGA...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000329008.9
CDS-3UTR GCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGTGGCTGGCGGGAGGCTaGTACTCCATGCCGCTCCGG +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKWLAGG*YSMPLR
Trigger: CCGGAGCGGCATGGAGTAGCAGCCTCCCGCCAGCCA...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGGGGGGCGGTGCGGAATaGATGCGCCGAGCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEGGGAE*MRRAGS
Trigger: GCTGCCCGCTCGGCGCATCCATTCCGCACCGCCCCC...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000329008.9
CDS-3UTR CCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGGCATCTTTTCCCAGGTaGGGAAGTCGGGGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWASFPR*GSRGPG
Trigger: GCCAGGCCCCCGACTTCCCCACCTGGGAAAAGATGC...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000395275.7
CDS-3UTR TCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGCGTGGTGGGTCTCCATaGCTCCAGATGGCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWRGGSP*LQMAGC
Trigger: ACACCCAGCCATCTGGAGTCATGGAGACCCACCACG...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGAGATCCCAGGACATGTaGCCACACGTGGCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWRSQDM*PHVARP
Trigger: TGGCCTGGCCACGTGTGGTCACATGTCCTGGGATCT...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGCCTGTTCTTGCTGTGTaGCGTGCCTGCTCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWPVLAV*RACSPF
Trigger: GAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGG...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGCGGTGCGGAATGGATaGGCCGAGCGGGCAGCGCTC +
Preference number: 4 (lower is better)
Translates to: KAGTAQHSASLISHLKGCAVRNG*AERAAL
Trigger: GAGCGCTGCCCGCTCGGCGCATCCATTCCGCACCGC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329008.9
CDS-3UTR GCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTTGGCTGGCGGGAGGCTaGTACTCCATGCCGCTCCGG +
Preference number: 4 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSWLAGG*YSMPLR
Trigger: CCGGAGCGGCATGGAGTAGCAGCCTCCCGCCAGCCA...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGCGCACGGCATGCACATaGGCGGTGAGCTGCAACACA +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWRTACT*AVSCNT
Trigger: TGTGTTGCAGCTCACCGCGCATGTGCATGCCGTGCG...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCGGGGGAAAGGCAGGTTaGTGCCTCCTTGGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSGGKAG*CLLGLA
Trigger: GGCCAGACCAAGGAGGCAGCAACCTGCCTTTCCCCC...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATGGGGGAAAGGCAGGTTaGTGCCTCCTTGGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: THVPSLMTATITATPPPHGGKAG*CLLGLA
Trigger: GGCCAGACCAAGGAGGCAGCAACCTGCCTTTCCCCC...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCTGGGGAGGGTGGGCTTaGTTCCAGGTCACTGGGAGC +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSWGGWA*FQVTGS
Trigger: GCTCCCAGTGACCTGGAAGCAAGCCCACCCTCCCCA...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATCAGGGTAGGGGCAGGTaGCCGGGCAAGCTTTTCCAC +
Preference number: 4 (lower is better)
Translates to: THVPSLMTATITATPPPHQGRGR*PGKLFH
Trigger: GTGGAAAAGCTTGCCCGGCCACCTGCCCCTACCCTG...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 72 bp AGGGCAGGTAAGGGGGAAAGGCAGGTTGCTGCCTCCTaGGTCTGGCCTTGCTGGGCTGAACTCCAGGAAGTT +
Preference number: 4 (lower is better)
Translates to: RAGKGERQVAAS*VWPCWAELQEV
Trigger: AACTTCCTGGAGTTCAGCCCAGCAAGGCCAGACCAAGGAGGCAGCAACCTGCCTTTCCCCCTTACCTGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCCATGCACATGCGCGGTaGGCTGCAACACAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSHAHAR*AATQCG
Trigger: GCCACACTGTGTTGCAGCTCACCGCGCATGTGCATG...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGGTGAGGGGTGCAGCTaGAGACCGCCAGGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: KAGTAQHSASLISHLKGCGEGCS*RPPGLH
Trigger: GTGCAGCCCTGGCGGTCTTCAGCTGCACCCCTCACC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATTTGCAGAGGGACCTGTaGTCCCCCAGGCTCTTGGGA +
Preference number: 4 (lower is better)
Translates to: THVPSLMTATITATPPPHLQRDL*SPRLLG
Trigger: TCCCAAGAGCCTGGGGGATCACAGGTCCCTCTGCAA...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCAGATCCCAGGACATGTaGCCACACGTGGCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSRSQDM*PHVARP
Trigger: TGGCCTGGCCACGTGTGGTCACATGTCCTGGGATCT...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGCTCTCCACCAGGAGCTaGCAGGATCCTTTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWLSTRS*QDPFLA
Trigger: GGCCAAGAAAGGATCCTGTCAGCTCCTGGTGGAGAG...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGGCTGTTCGCTGTCACTaGCAGCAGAGAGCGATCGGT +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWAVRCH*QQRAIG
Trigger: ACCGATCGCTCTCTGCTGGCAGTGACAGCGAACAGC...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
CDS-3UTR GCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCGGGCTGGGAGTTGGCTaGCTGACAAGGAAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSGLGVG*LTRKAS
Trigger: GGAAGCCTTCCTTGTCAGGCAGCCAACTCCCAGCCC...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGAGATGGGTGAGTCTATaGCCGGCATGGGGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWRWVSL*PAWGLC
Trigger: GCACAACCCCCATGCCGGGCATAGACTCACCCATCT...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGCCGGCGGTCACATGGTaGAACGGCATCTTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWPAVTW*NGIFSL
Trigger: GAGGGAAAAGATGCCGTTCCACCATGTGACCGCCGG...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329008.9
CDS-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATGCACCCCTATGGATGTaGTTGGGTGGTTCGGGGGTC +
Preference number: 4 (lower is better)
Translates to: THVPSLMTATITATPPPHAPLWM*LGGSGV
Trigger: GACCCCCGAACCACCCAACCACATCCATAGGGGTGC...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCGGCATCCCTTGGGCATaGGAGACCAGGACCTTCTGG +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSGIPWA*ETRTFW
Trigger: CCAGAAGGTCCTGGTCTCCCATGCCCAAGGGATGCC...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGCAGGGTAGGGGCAGGTaGCCGGGCAAGCTTTTCCAC +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKQGRGR*PGKLFH
Trigger: GTGGAAAAGCTTGCCCGGCCACCTGCCCCTACCCTG...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCGCATCCTCCCAGGAATaGCGAGCTACCAGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSASSQE*RATSLL
Trigger: GAGCAGGCTGGTAGCTCGCCATTCCTGGGAGGATGC...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGCTCTCCGGGTTGCTCTaGCAGCCGCATCGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSELSGLL*QPHRGS
Trigger: GGACCCCCGATGCGGCTGCCAGAGCAACCCGGAGAG...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395275.7
CDS-3UTR TCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCACCATCGCGACCTTCTaGAGACACCAGTTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSTIATF*RHQFGA
Trigger: GGCCCCAAACTGGTGTCTTCAGAAGGTCGCGATGGT...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
CDS-3UTR TCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTCATGCACATGCGCGGTaGGCTGCAACACAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLHAHAR*AATQCG
Trigger: GCCACACTGTGTTGCAGCTCACCGCGCATGTGCATG...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTAGTGCCGACGGAAACTaGGAGCACCCCAGCTCTACC +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLSADGN*EHPSST
Trigger: GGTAGAGCTGGGGTGCTCTCAGTTTCCGTCGGCACT...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGTTGCAGAGGGACCTGTaGTCCCCCAGGCTCTTGGGA +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKLQRDL*SPRLLG
Trigger: TCCCAAGAGCCTGGGGGATCACAGGTCCCTCTGCAA...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGTGGGAGTTGGCTGCCTaGCAAGGAAGGCTTCCCTAT +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWWELAA*QGRLPY
Trigger: ATAGGGAAGCCTTCCTTGTCAGGCAGCCAACTCCCA...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGCCCTTCTGGGGCAGTTaGGCAATCAGGTGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKPFWGS*AIRCGG
Trigger: CCCTCCACACCTGATTGCTCAACTGCCCCAGAAGGG...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCCTCTCCACCAGGAGCTaGCAGGATCCTTTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSLSTRS*QDPFLA
Trigger: GGCCAAGAAAGGATCCTGTCAGCTCCTGGTGGAGAG...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTGCATCTTTTCCCTCTTaGTGGGCCGGGGCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSASFPS*WAGAPQ
Trigger: CTGCGGAGCCCCGGCCCAGCAAGAGGGAAAAGATGC...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329008.9
CDS-3UTR GCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCGCTGTTCGCTGTCACTaGCAGCAGAGAGCGATCGGT +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSAVRCH*QQRAIG
Trigger: ACCGATCGCTCTCTGCTGGCAGTGACAGCGAACAGC...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
CDS-3UTR GCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATGAGGCTGCTACTCCATaGCGCTCCGGAGTATCTGGT +
Preference number: 4 (lower is better)
Translates to: THVPSLMTATITATPPPHEAATP*RSGVSG
Trigger: ACCAGATACTCCGGAGCGGCATGGAGTAGCAGCCTC...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCGAGGCTGCTACTCCATaGCGCTCCGGAGTATCTGGT +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSEAATP*RSGVSG
Trigger: ACCAGATACTCCGGAGCGGCATGGAGTAGCAGCCTC...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCAACCTGCCTCACCCCTaGCCCAAAGAAGCAGGGATG +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSNLPHP*PKEAGM
Trigger: CATCCCTGCTTCTTTGGGGCAGGGGTGAGGCAGGTT...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTGGGCTGGGAGTTGGCTaGCTGACAAGGAAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLGLGVG*LTRKAS
Trigger: GGAAGCCTTCCTTGTCAGGCAGCCAACTCCCAGCCC...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGTCTTGCTGTGTGACGTaGCTGCTCCCCCTTCACCTT +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWSCCVT*LLPLHL
Trigger: AAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGA...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATGCTGGAGGTGGGGCCTaGTGGGAGATATTTGGGTCA +
Preference number: 4 (lower is better)
Translates to: THVPSLMTATITATPPPHAGGGA*WEIFGS
Trigger: TGACCCAAATATCTCCCAGCAGGCCCCACCTCCAGC...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCTCCTCCCGGTGGGCTTaGGGTCTTGCTGACTTCAAG +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSSSRWA*GLADFK
Trigger: CTTGAAGTCAGCAAGACCGCAAGCCCACCGGGAGGA...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395275.7
ENST00000395276.6
CDS-3UTR GCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGTTCCCCTCTCCGGGTTaGTCTGGCAGCCGCATCGGG +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEFPSPG*SGSRIG
Trigger: CCCGATGCGGCTGCCAGAGCAACCCGGAGAGGGGAA...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395275.7
CDS-3UTR CCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGAGCTGCAACACAGTGTaGCTGGCGGGAGGCTGCTAC +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKSCNTV*LAGGCY
Trigger: GTAGCAGCCTCCCGCCAGCCACACTGTGTTGCAGCT...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCGGAAGGAAGCCAGGGTaGGATGGAAAGCCCCCTCTT +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSGRKPG*DGKPPL
Trigger: AAGAGGGGGCTTTCCATCCCACCCTGGCTTCCTTCC...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGTCCGGCATAGAGACGTaGTGGGTCTCCATGACTCCA +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWSGIET*WVSMTP
Trigger: TGGAGTCATGGAGACCCACCACGTCTCTATGCCGGA...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTCCCTATGGATGTGGTTaGGTGGTTCGGGGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLPYGCG*VVRGSG
Trigger: CCCTGACCCCCGAACCACCCAACCACATCCATAGGG...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGCCCTATGGATGTGGTTaGGTGGTTCGGGGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKPYGCG*VVRGSG
Trigger: CCCTGACCCCCGAACCACCCAACCACATCCATAGGG...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCGGTCCTGCACCCCTATaGATGTGGTTGGGTGGTTCG +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSGPAPL*MWLGGS
Trigger: CGAACCACCCAACCACATCCATAGGGGTGCAGGACC...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTTCCCTGGGTGCCACATaGGGGGTTACCACAGTGGGA +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLSLGAT*GVTTVG
Trigger: TCCCACTGTGGTAACCCCCCATGTGGCACCCAGGGA...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTGGCATCCCTTGGGCATaGGAGACCAGGACCTTCTGG +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLGIPWA*ETRTFW
Trigger: CCAGAAGGTCCTGGTCTCCCATGCCCAAGGGATGCC...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATCTACATGGCATCCCTTaGGCATGGGAGACCAGGACC +
Preference number: 4 (lower is better)
Translates to: THVPSLMTATITATPPPHLHGIP*AWETRT
Trigger: GGTCCTGGTCTCCCATGCCCAAGGGATGCCATGTAG...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCGGCAGCCAAGGTCACTaGTTCCTAAGTCCGGAGGAC +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSGSQGH*FLSPED
Trigger: GTCCTCCGGACTTAGGAACCAGTGACCTTGGCTGCC...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATCAGCCTCCACACAGTTaGGCAGCCAAGGTCACTGGT +
Preference number: 4 (lower is better)
Translates to: THVPSLMTATITATPPPHQPPHS*AAKVTG
Trigger: ACCAGTGACCTTGGCTGCCCAACTGTGTGGAGGCTG...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGTGTCTGGGGGCTTTGTaGGTATCTGGAAAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWCLGAL*VSGKVG
Trigger: CCCCACCTTTCCAGATACCCACAAAGCCCCCAGACA...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCTGGGTGGAAGAGTCCTaGCTCCTGGGCTTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSWVEES*LLGFLQ
Trigger: CTGGAGAAAGCCCAGGAGCCAGGACTCTTCCACCCA...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCCCGGCGGTCACATGGTaGAACGGCATCTTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSPAVTW*NGIFSQ
Trigger: CTGGGAAAAGATGCCGTTCCACCATGTGACCGCCGG...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395275.7
3UTR CAA 72 bp CCAGGCCAGCCCAAACCAGGGAGCTGTCCTGGGTGGTaGCATCCTTCATTTTCTGTCCATGCCCTCATAGGG +
Preference number: 4 (lower is better)
Translates to: PGQPKPGSCPGW*HPSFSVHALIG
Trigger: CCCTATGAGGGCATGGACAGAAAATGAAGGATGCAACCACCCAGGACAGCTCCCTGGTTTGGGCTGGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATCTTGGAACTGAGGGTTaGCCTCAGCAGAGAGTCTCC +
Preference number: 4 (lower is better)
Translates to: THVPSLMTATITATPPPHLGTEG*PQQRVS
Trigger: GGAGACTCTCTGCTGAGGTCAACCCTCAGTTCCAAG...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTTTGCAGAGGGACCTGTaGTCCCCCAGGCTCTTGGGA +
Preference number: 4 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSLQRDL*SPRLLG
Trigger: TCCCAAGAGCCTGGGGGATCACAGGTCCCTCTGCAA...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCCTGGCCTTGCTGGGCTaGACTCCAGGAAGTTTTGCA +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSLALLG*TPGSFA
Trigger: TGCAAAACTTCCTGGAGTTCAGCCCAGCAAGGCCAG...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCTGGGAGTTGGCTGCCTaGCAAGGAAGGCTTCCCTAT +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSWELAA*QGRLPY
Trigger: ATAGGGAAGCCTTCCTTGTCAGGCAGCCAACTCCCA...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTTCGTGTGGATCAGACTaGTGGGCAGCCCCATGGCAC +
Preference number: 4 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSSCGSD*WAAPWH
Trigger: GTGCCATGGGGCTGCCCATCAGTCTGATCCACACGA...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCGAGGCATTCTGGGCTTaGCAGATGTCAGCATCCTCC +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSEAFWA*QMSASS
Trigger: GGAGGATGCTGACATCTGTCAAGCCCAGAATGCCTC...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGTTCCTTGGAGAGAGTTaGGAGCCACTGGCTTGTGCA +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWFLGES*EPLACA
Trigger: TGCACAAGCCAGTGGCTCTCAACTCTCTCCAAGGAA...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATTCCATGTCCAAGCGCTaGATGATGATGGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: THVPSLMTATITATPPPHSMSKR*MMMASS
Trigger: GGAGCTGGCCATCATCATGCAGCGCTTGGACATGGA...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
CDS-3UTR GCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGGAGGCTGCTACTCCATaGCGCTCCGGAGTATCTGGT +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKEAATP*RSGVSG
Trigger: ACCAGATACTCCGGAGCGGCATGGAGTAGCAGCCTC...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGATCTGCCCGCACGGCATaGACATGCGCGGTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: TRSQADVDTLLKQPAELRSARTA*TCAVSC
Trigger: GCAGCTCACCGCGCATGTGCATGCCGTGCGGGCAGA...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGTGTGGAGGAAGAGTCTaGCCGCACGGCATGCACATG +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKCGGRV*PHGMHM
Trigger: CATGTGCATGCCGTGCGGGCAGACTCTTCCTCCACA...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGAACCTGCCTCACCCCTaGCCCAAAGAAGCAGGGATG +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKNLPHP*PKEAGM
Trigger: CATCCCTGCTTCTTTGGGGCAGGGGTGAGGCAGGTT...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCTCCTTGGTCTGGCCTTaGTGGGCTGAACTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSSLVWP*WAELQE
Trigger: TTCCTGGAGTTCAGCCCAGCAAGGCCAGACCAAGGA...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGGCTGGAGGTGGGGCCTaGTGGGAGATATTTGGGTCA +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKAGGGA*WEIFGS
Trigger: TGACCCAAATATCTCCCAGCAGGCCCCACCTCCAGC...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTCATGTTGATCTCCAGTaGTGGAGGTGGGGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLHVDLQ*WRWGLL
Trigger: CAGCAGGCCCCACCTCCAGCACTGGAGATCAACATG...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCCCGGCATGGGGGTTGTaGTCAACTGATGAACTACCC +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSPAWGL*STDELP
Trigger: GGGTAGTTCATCAGTTGAGCACAACCCCCATGCCGG...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGAGATGGGTGAGTCTATaGCCGGCATGGGGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKRWVSL*PAWGLC
Trigger: GCACAACCCCCATGCCGGGCATAGACTCACCCATCT...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATAGAGCCACTGGCTTGTaGAACTCTCCACCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: THVPSLMTATITATPPPHRATGL*NSPPGA
Trigger: AGCTCCTGGTGGAGAGTTGCACAAGCCAGTGGCTCT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATAAGCCGGCGGTCACATaGTGGAACGGCATCTTTTCC +
Preference number: 4 (lower is better)
Translates to: THVPSLMTATITATPPPHKPAVT*WNGIFS
Trigger: GGAAAAGATGCCGTTCCACCATGTGACCGCCGGCTT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
CDS-3UTR CCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGTCATCAAAATCCACCTaGCCATCCCCGTCCATGTCC +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWSSKST*PSPSMS
Trigger: GGACATGGACGGGGATGGCCAGGTGGATTTTGATGA...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
CDS-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATCCGCTCCGGAGTATCTaGTTGGCTGCAATCAGCATG +
Preference number: 4 (lower is better)
Translates to: THVPSLMTATITATPPPHPLRSI*LAAISM
Trigger: CATGCTGATTGCAGCCAACCAGATACTCCGGAGCGG...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTTCCGTGTCTGCTGTGTaGAGGAAGAGTCTGCCCGCA +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLSVSAV*RKSLPA
Trigger: TGCGGGCAGACTCTTCCTCCACACAGCAGACACGGA...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCCAGGTTCCAAAATGCTaGTGCGGGATGGGCTCTAGG +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSQVPKC*CGMGSR
Trigger: CCTAGAGCCCATCCCGCACCAGCATTTTGGAACCTG...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATCAAGAAAGCTTCTGGTaGCTCGCTACTGGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: THVPSLMTATITATPPPHQESFW*LATGRG
Trigger: CCCCCTTCCAGTAGCGAGCCACCAGAAGCTTTCTTG...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGCCATCTAAGTCCAGATaGGAGAGGGCAAACTGCCCA +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWPSKSR*ERANCP
Trigger: TGGGCAGTTTGCCCTCTCCCATCTGGACTTAGATGG...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGATGGATGTGGTTGGGTaGTTCGGGGGTCAGGGAAAA +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWMDVVG*FGGQGK
Trigger: TTTTCCCTGACCCCCGAACCACCCAACCACATCCAT...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTCCCTATGGATGTGGTTaGGTGGTTCGGGGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSPYGCG*VVRGSG
Trigger: CCCTGACCCCCGAACCACCCAACCACATCCATAGGG...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGTTCCAGAAAACAGGATaGCGGCGCCTCTCCAGAACT +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWFQKTG*RRLSRT
Trigger: AGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAA...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGAACAGGGCTGGGAGTTaGCTGCCTGACAAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKNRAGS*LPDKEG
Trigger: GCCTTCCTTGTCAGGCAGCCAACTCCCAGCCCTGTT...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTAACAGGGCTGGGAGTTaGCTGCCTGACAAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLNRAGS*LPDKEG
Trigger: GCCTTCCTTGTCAGGCAGCCAACTCCCAGCCCTGTT...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTCTACATGGCATCCCTTaGGCATGGGAGACCAGGACC +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLLHGIP*AWETRT
Trigger: GGTCCTGGTCTCCCATGCCCAAGGGATGCCATGTAG...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTGGCAGCCAAGGTCACTaGTTCCTAAGTCCGGAGGAC +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLGSQGH*FLSPED
Trigger: GTCCTCCGGACTTAGGAACCAGTGACCTTGGCTGCC...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTCAGCCTCCACACAGTTaGGCAGCCAAGGTCACTGGT +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLQPPHS*AAKVTG
Trigger: ACCAGTGACCTTGGCTGCCCAACTGTGTGGAGGCTG...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTGGGTATCTGGAAAGGTaGGGCGCAGCTTCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLGYLER*GAASLG
Trigger: CCCCAAAGAAGCTGCGCCCCACCTTTCCAGATACCC...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGACCAGGGAGCTGTCCTaGGTGGTTGCATCCTTCATT +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWTRELS*VVASFI
Trigger: AATGAAGGATGCAACCACCCAGGACAGCTCCCTGGT...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTGTTGATCTCCAGTGCTaGAGGTGGGGCCTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSVDLQC*RWGLLG
Trigger: TCCCAGCAGGCCCCACCTCCAGCACTGGAGATCAAC...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGAGTCTATGCCCGGCATaGGGGTTGTGCTCAACTGAT +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWSLCPA*GLCSTD
Trigger: ATCAGTTGAGCACAACCCCCATGCCGGGCATAGACT...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGACAGAGCCTTTCGTGTaGATCAGACTGATGGGCAGC +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWTEPFV*IRLMGS
Trigger: GCTGCCCATCAGTCTGATCCACACGAAAGGCTCTGT...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGTGGGTGGAAGAGTCCTaGCTCCTGGGCTTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKWVEES*LLGFLQ
Trigger: CTGGAGAAAGCCCAGGAGCCAGGACTCTTCCACCCA...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGAACCTAGATAGTGGGTaGAAGAGTCCTGGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWNLDSG*KSPGSW
Trigger: CCAGGAGCCAGGACTCTTCCACCCACTATCTAGGTT...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATCTCTCTCCCTGGTCATaGGTGGGCCACATCAAAAGC +
Preference number: 4 (lower is better)
Translates to: THVPSLMTATITATPPPHLSPWS*VGHIKS
Trigger: GCTTTTGATGTGGCCCACCCATGACCAGGGAGAGAG...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGGTCTGCTCCTCCCGGTaGGCTTGCGGTCTTGCTGAC +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEVCSSR*ACGLAD
Trigger: GTCAGCAAGACCGCAAGCCCACCGGGAGGAGCAGAC...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395275.7
ENST00000395276.6
CDS-3UTR TCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGCATGCACATGCGCGGTaGGCTGCAACACAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEHAHAR*AATQCG
Trigger: GCCACACTGTGTTGCAGCTCACCGCGCATGTGCATG...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTTCAGCCTCTTGGAACTaGGGGTTGACCTCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLSASWN*GLTSAE
Trigger: CTCTGCTGAGGTCAACCCTCAGTTCCAAGAGGCTGA...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCCTTCTGTGGCAACCCTaGAGTCAGCCTCTTGGAACT +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSLLWQP*SQPLGT
Trigger: AGTTCCAAGAGGCTGACTTCAGGGTTGCCACAGAAG...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGCTGGCCTTGCTGGGCTaGACTCCAGGAAGTTTTGCA +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKLALLG*TPGSFA
Trigger: TGCAAAACTTCCTGGAGTTCAGCCCAGCAAGGCCAG...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGTGGAGGAGGGGGCTTTaGAGAATCATCCCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKWRRGL*RIIPGV
Trigger: AACCCCAGGGATGATTCTTCAAAGCCCCCTCCTCCA...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCACTCATTTTCTGCCCTaGAGACCAGCCTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSTHFLP*RPASAA
Trigger: TGCAGCTGAGGCTGGTCTTCAGGGCAGAAAATGAGT...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGCAAACTCTGAGCTCCTaGAGTCTAAGGAATGCCGCT +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWQTLSS*SLRNAA
Trigger: AGCGGCATTCCTTAGACTTCAGGAGCTCAGAGTTTG...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGTGGGAGTTGGCTGCCTaGCAAGGAAGGCTTCCCTAT +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKWELAA*QGRLPY
Trigger: ATAGGGAAGCCTTCCTTGTCAGGCAGCCAACTCCCA...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTCCCTTCTGGGGCAGTTaGGCAATCAGGTGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: KAGTAQHSASLISHLKGCPFWGS*AIRCGG
Trigger: CCCTCCACACCTGATTGCTCAACTGCCCCAGAAGGG...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTCCTGTTCTTGCTGTGTaGCGTGCCTGCTCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: KAGTAQHSASLISHLKGCPVLAV*RACSPF
Trigger: GAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGG...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGTCGTGTGGATCAGACTaGTGGGCAGCCCCATGGCAC +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSESCGSD*WAAPWH
Trigger: GTGCCATGGGGCTGCCCATCAGTCTGATCCACACGA...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTGAGGCATTCTGGGCTTaGCAGATGTCAGCATCCTCC +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLEAFWA*QMSASS
Trigger: GGAGGATGCTGACATCTGTCAAGCCCAGAATGCCTC...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGGGCTTTAGAGAAACCTaGAGCCAGGGAGGAATGTCA +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWGFRET*SQGGMS
Trigger: TGACATTCCTCCCTGGCTTCAGGTTTCTCTAAAGCC...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGCAGAAAGCTCATCTTTaGTGCTCCCTCGAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWQKAHL*CSLESA
Trigger: TGCTGACTCGAGGGAGCATCAAAGATGAGCTTTCTG...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCATGGCTGGCGGGAGGCTaGTACTCCATGCCGCTCCGG +
Preference number: 4 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPWLAGG*YSMPLR
Trigger: CCGGAGCGGCATGGAGTAGCAGCCTCCCGCCAGCCA...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTACATGCGCGGTGAGCTaGAACACAGTGTGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: KAGTAQHSASLISHLKGCTCAVS*NTVWLA
Trigger: CGCCAGCCACACTGTGTTGCAGCTCACCGCGCATGT...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGACATGCGCGGTGAGCTaGAACACAGTGTGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSETCAVS*NTVWLA
Trigger: CGCCAGCCACACTGTGTTGCAGCTCACCGCGCATGT...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGCGCACGGCATGCACATaGGCGGTGAGCTGCAACACA +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSERTACT*AVSCNT
Trigger: TGTGTTGCAGCTCACCGCGCATGTGCATGCCGTGCG...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTAACCTGCCTCACCCCTaGCCCAAAGAAGCAGGGATG +
Preference number: 4 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSNLPHP*PKEAGM
Trigger: CATCCCTGCTTCTTTGGGGCAGGGGTGAGGCAGGTT...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGGAAAGTTTCTACAGCTaGCCTCAGGCTGTTGCCAGT +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWESFYS*PQAVAS
Trigger: ACTGGCAACAGCCTGAGGGCAGCTGTAGAAACTTTC...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGTCCTTGGTCTGGCCTTaGTGGGCTGAACTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKSLVWP*WAELQE
Trigger: TTCCTGGAGTTCAGCCCAGCAAGGCCAGACCAAGGA...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGTTCATTTTCTGTCCATaGCCTCATAGGGCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWFIFCP*PHRASG
Trigger: CCCTGAGGCCCTATGAGGGCATGGACAGAAAATGAA...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCATGTTCTTCAGGGGTTaGAGCTCTGCAGACCTCCTG +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSMFFRG*SSADLL
Trigger: CAGGAGGTCTGCAGAGCTGCAACCCCTGAAGAACAT...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTTCTTGCTGTGTGACGTaGCTGCTCCCCCTTCACCTT +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLSCCVT*LLPLHL
Trigger: AAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGA...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATTCTTGCTCCTGTTCTTaGTGTGTGACGTGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: THVPSLMTATITATPPPHSCSCS*CVTCLL
Trigger: GAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGA...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGAGAGCCACTGGCTTGTaGAACTCTCCACCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKRATGL*NSPPGA
Trigger: AGCTCCTGGTGGAGAGTTGCACAAGCCAGTGGCTCT...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGTCTGGATATGAGAGCTaGCAAGCTCCAATCGTCCTG +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWSGYES*QAPIVL
Trigger: CAGGACGATTGGAGCTTGGCAGCTCTCATATCCAGA...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGGCAACACAGTGTGGCTaGCGGGAGGCTGCTACTCCA +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEATQCG*REAATP
Trigger: TGGAGTAGCAGCCTCCCGCCAGCCACACTGTGTTGC...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTAGCTGCAACACAGTGTaGCTGGCGGGAGGCTGCTAC +
Preference number: 4 (lower is better)
Translates to: KAGTAQHSASLISHLKGCSCNTV*LAGGCY
Trigger: GTAGCAGCCTCCCGCCAGCCACACTGTGTTGCAGCT...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTGGAAGGAAGCCAGGGTaGGATGGAAAGCCCCCTCTT +
Preference number: 4 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSGRKPG*DGKPPL
Trigger: AAGAGGGGGCTTTCCATCCCACCCTGGCTTCCTTCC...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTTCCGGCATAGAGACGTaGTGGGTCTCCATGACTCCA +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLSGIET*WVSMTP
Trigger: TGGAGTCATGGAGACCCACCACGTCTCTATGCCGGA...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTCAAGAAAGCTTCTGGTaGCTCGCTACTGGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLQESFW*LATGRG
Trigger: CCCCCTTCCAGTAGCGAGCCACCAGAAGCTTTCTTG...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTGATCCCCCAGGCTCTTaGGAGCTTACATCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSDPPGS*ELTSAP
Trigger: GGGAGCAGATGTAAGCTCCCAAGAGCCTGGGGGATC...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATCCATCTAAGTCCAGATaGGAGAGGGCAAACTGCCCA +
Preference number: 4 (lower is better)
Translates to: THVPSLMTATITATPPPHPSKSR*ERANCP
Trigger: TGGGCAGTTTGCCCTCTCCCATCTGGACTTAGATGG...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGCACCCCTATGGATGTaGTTGGGTGGTTCGGGGGTC +
Preference number: 4 (lower is better)
Translates to: KAGTAQHSASLISHLKGCAPLWM*LGGSGV
Trigger: GACCCCCGAACCACCCAACCACATCCATAGGGGTGC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGGCACCCCTATGGATGTaGTTGGGTGGTTCGGGGGTC +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEAPLWM*LGGSGV
Trigger: GACCCCCGAACCACCCAACCACATCCATAGGGGTGC...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGCCTACTCCTGCACAGTaGCTAATCTCTCTGCCAATG +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWPTPAQ*LISLPM
Trigger: CATTGGCAGAGAGATTAGCCACTGTGCAGGAGTAGG...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCTTCCAGAAAACAGGATaGCGGCGCCTCTCCAGAACT +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSFQKTG*RRLSRT
Trigger: AGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAA...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATGAAGTCACTTCCAGCTaGGGCTACATGGCATCCCTT +
Preference number: 4 (lower is better)
Translates to: THVPSLMTATITATPPPHEVTSS*GYMASL
Trigger: AAGGGATGCCATGTAGCCCCAGCTGGAAGTGACTTC...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTGGCTTTGTGGGTATCTaGAAAGGTGGGGCGCAGCTT +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLGFVGI*KGGAQL
Trigger: AAGCTGCGCCCCACCTTTCCAGATACCCACAAAGCC...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTTGTCTGGGGGCTTTGTaGGTATCTGGAAAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLCLGAL*VSGKVG
Trigger: CCCCACCTTTCCAGATACCCACAAAGCCCCCAGACA...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCACCAGGGAGCTGTCCTaGGTGGTTGCATCCTTCATT +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSTRELS*VVASFI
Trigger: AATGAAGGATGCAACCACCCAGGACAGCTCCCTGGT...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGTTGATCTCCAGTGCTaGAGGTGGGGCCTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: KAGTAQHSASLISHLKGCVDLQC*RWGLLG
Trigger: TCCCAGCAGGCCCCACCTCCAGCACTGGAGATCAAC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGACAGGGTAGGGGCAGGTaGCCGGGCAAGCTTTTCCAC +
Preference number: 4 (lower is better)
Translates to: TRSQADVDTLLKQPAELRQGRGR*PGKLFH
Trigger: GTGGAAAAGCTTGCCCGGCCACCTGCCCCTACCCTG...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCCCTGAGGAAAAGAGATaGGTGAGTCTATGCCCGGCA +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSPEEKR*VSLCPA
Trigger: TGCCGGGCATAGACTCACCCATCTCTTTTCCTCAGG...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATCCTGAGGAAAAGAGATaGGTGAGTCTATGCCCGGCA +
Preference number: 4 (lower is better)
Translates to: THVPSLMTATITATPPPHPEEKR*VSLCPA
Trigger: TGCCGGGCATAGACTCACCCATCTCTTTTCCTCAGG...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCCCTCAGGTCCAGGGATaGAGCAATATCGCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSPQVQG*SNIAVA
Trigger: TGCAACTGCGATATTGCTCCATCCCTGGACCTGAGG...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATCCTCAGGTCCAGGGATaGAGCAATATCGCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: THVPSLMTATITATPPPHPQVQG*SNIAVA
Trigger: TGCAACTGCGATATTGCTCCATCCCTGGACCTGAGG...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATACAGAGCCTTTCGTGTaGATCAGACTGATGGGCAGC +
Preference number: 4 (lower is better)
Translates to: THVPSLMTATITATPPPHTEPFV*IRLMGS
Trigger: GCTGCCCATCAGTCTGATCCACACGAAAGGCTCTGT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGCTCTCTCCCTGGTCATaGGTGGGCCACATCAAAAGC +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKLSPWS*VGHIKS
Trigger: GCTTTTGATGTGGCCCACCCATGACCAGGGAGAGAG...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCAGAGTTGAGAGCCACTaGCTTGTGCAACTCTCCACC +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSRVESH*LVQLST
Trigger: GGTGGAGAGTTGCACAAGCCAGTGGCTCTCAACTCT...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGGGAAGTCGGGGGCCTaGCTCCTCGGCGGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGGKSGA*LLGGSS
Trigger: AGAGGAGCCGCCGAGGAGCCAGGCCCCCGACTTCCC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000395275.7
3UTR CAA 72 bp GCATCCTCCCAGGAATGGCGAGCTACCAGCCTGCTCTaGAAATGCACAGAGCCTTTCGTGTGGATCAGACTG +
Preference number: 4 (lower is better)
Translates to: ASSQEWRATSLL*KCTEPFVWIRL
Trigger: CAGTCTGATCCACACGAAAGGCTCTGTGCATTTCAAGAGCAGGCTGGTAGCTCGCCATTCCTGGGAGGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 72 bp GGGTTTTATGTTGCCTGGGGCAGAAGGGTTAGAGACTaGTGGATCCTGCAGCTGCTCTCTTCCTGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: GFYVAWGRRVRD*WILQLLSSCPL
Trigger: GAGAGGGCAGGAAGAGAGCAGCTGCAGGATCCACAAGTCTCTAACCCTTCTGCCCCAGGCAACATAAAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCCAGAGAGCGATCGGTTaGGGTAATTCCCCTTGTACA +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSQRAIG*GNSPCT
Trigger: TGTACAAGGGGAATTACCTCAACCGATCGCTCTCTG...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
CDS-3UTR TCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGACCATCGCGACCTTCTaGAGACACCAGTTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSETIATF*RHQFGA
Trigger: GGCCCCAAACTGGTGTCTTCAGAAGGTCGCGATGGT...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
CDS-3UTR TCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTAATGGGGAGTGGAGGTaGCTGTGTGTTCATGCCTCT +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLNGEWR*LCVHAS
Trigger: AGAGGCATGAACACACAGTCACCTCCACTCCCCATT...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGGGTGAGGGGTGCAGCTaGAGACCGCCAGGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPGEGCS*RPPGLH
Trigger: GTGCAGCCCTGGCGGTCTTCAGCTGCACCCCTCACC...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGACGTGGTGGGTCTCCATaGCTCCAGATGGCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: TRSQADVDTLLKQPAELRRGGSP*LQMAGC
Trigger: ACACCCAGCCATCTGGAGTCATGGAGACCCACCACG...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTACTCATTTTCTGCCCTaGAGACCAGCCTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLTHFLP*RPASAA
Trigger: TGCAGCTGAGGCTGGTCTTCAGGGCAGAAAATGAGT...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATCAAACTCTGAGCTCCTaGAGTCTAAGGAATGCCGCT +
Preference number: 4 (lower is better)
Translates to: THVPSLMTATITATPPPHQTLSS*SLRNAA
Trigger: AGCGGCATTCCTTAGACTTCAGGAGCTCAGAGTTTG...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGTCCGGAGGACAGAATaGGGGGTGAGCTATTCCCTC +
Preference number: 4 (lower is better)
Translates to: KAGTAQHSASLISHLKGCVRRTE*GVSYSL
Trigger: GAGGGAATAGCTCACCCCTCATTCTGTCCTCCGGAC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGACACCCAGACATTTCTaGAACCACTGGGTTTGCCTA +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWTPRHF*NHWVCL
Trigger: TAGGCAAACCCAGTGGTTTCAGAAATGTCTGGGTGT...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATTCTGTACCATCACGGTaGTATAGGAAAAGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: THVPSLMTATITATPPPHSVPSR*YRKRGP
Trigger: AGGGCCCCTTTTCCTATATCACCGTGATGGTACAGA...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGACCCTTCTGGGGCAGTTaGGCAATCAGGTGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: TRSQADVDTLLKQPAELRPFWGS*AIRCGG
Trigger: CCCTCCACACCTGATTGCTCAACTGCCCCAGAAGGG...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGACTCCTGATCTTAAGTaGTCCACCTGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKTPDLK*STCLGL
Trigger: GAGGCCAAGGCAGGTGGATCACTTAAGATCAGGAGT...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTCAGATTCCTCATGAATaGCTCGGTGCCCTCCCTGTA +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLQIPHE*LGALPV
Trigger: TACAGGGAGGGCACCGAGTCATTCATGAGGAATCTG...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATCCCCAAATTTCATGTTaGTCTCCAGTGCTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: THVPSLMTATITATPPPHPQISC*SPVLEV
Trigger: CACCTCCAGCACTGGAGATCAACATGAAATTTGGGG...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCCCCCAAATTTCATGTTaGTCTCCAGTGCTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSPQISC*SPVLEV
Trigger: CACCTCCAGCACTGGAGATCAACATGAAATTTGGGG...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTAGGAAAAGAGATGGGTaGGTCTATGCCCGGCATGGG +
Preference number: 4 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSRKRDG*VYARHG
Trigger: CCCATGCCGGGCATAGACTCACCCATCTCTTTTCCT...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCGGCTTTAGAGAAACCTaGAGCCAGGGAGGAATGTCA +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSGFRET*SQGGMS
Trigger: TGACATTCCTCCCTGGCTTCAGGTTTCTCTAAAGCC...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGCTTTGGGGAGGTGACTaGCTCCCTTTATTTTCACAC +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWLWGGD*LPLFSH
Trigger: GTGTGAAAATAAAGGGAGTCAGTCACCTCCCCAAAG...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTTTCCTTGGAGAGAGTTaGGAGCCACTGGCTTGTGCA +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLFLGES*EPLACA
Trigger: TGCACAAGCCAGTGGCTCTCAACTCTCTCCAAGGAA...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCTCCCCATCCAACAGTTaGCAGTTCACCAACCCAATG +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSSPSNS*QFTNPM
Trigger: CATTGGGTTGGTGAACTGTCAACTGTTGGATGGGGA...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGGGCTTATTCTGGATATaGGAGCTGCCAAGCTCCAAT +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWGLFWI*ELPSSN
Trigger: ATTGGAGCTTGGCAGCTCTCATATCCAGAATAAGCC...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATCAGGTCTGTCTGTTCTaGTTCTGGGAATGCACTCCT +
Preference number: 4 (lower is better)
Translates to: THVPSLMTATITATPPPHQVCLF*FWECTP
Trigger: AGGAGTGCATTCCCAGAAGCAGAACAGACAGACCTG...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAACATGCGCGGTGAGCTaGAACACAGTGTGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: TRSQADVDTLLKQPAELRTCAVS*NTVWLA
Trigger: CGCCAGCCACACTGTGTTGCAGCTCACCGCGCATGT...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCATCTGCCCGCACGGCATaGACATGCGCGGTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPSARTA*TCAVSC
Trigger: GCAGCTCACCGCGCATGTGCATGCCGTGCGGGCAGA...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGTGTGGAGGAAGAGTCTaGCCGCACGGCATGCACATG +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSECGGRV*PHGMHM
Trigger: CATGTGCATGCCGTGCGGGCAGACTCTTCCTCCACA...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCGGGAGAAAGGCTCTCTaGAGGTTCCAAAATGCTGGT +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSGRKAL*RFQNAG
Trigger: ACCAGCATTTTGGAACCTGCAGAGAGCCTTTCTCCC...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATAACTCCAGGAAGTTTTaGAGAGGGACCTGTGATCCC +
Preference number: 4 (lower is better)
Translates to: THVPSLMTATITATPPPHNSRKF*RGTCDP
Trigger: GGGATCACAGGTCCCTCTGCAAAACTTCCTGGAGTT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGGAAAGGCAGGTTGCTaGCTCCTTGGTCTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: KAGTAQHSASLISHLKGCGKAGC*LLGLAL
Trigger: CAAGGCCAGACCAAGGAGGCAGCAACCTGCCTTTCC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGCTCTCTCTAGCAGTCTaGAGAGGAATGCATTCTCCT +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWLSLAV*RGMHSP
Trigger: AGGAGAATGCATTCCTCTGCAGACTGCTAGAGAGAG...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCTGCAGAGAGTCAGGTTaGACTCAGGCTGAATTGGAG +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSCRESG*TQAELE
Trigger: CTCCAATTCAGCCTGAGTGCAACCTGACTCTCTGCA...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCTGGCTTGCAGGAGTGTaGTCAACAGGCAAACCGATA +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSWLAGV*STGKPI
Trigger: TATCGGTTTGCCTGTTGAGCACACTCCTGCAAGCCA...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATTTCACGTGTTTGGCTTaGAGGAGTGTGCTCAACAGG +
Preference number: 4 (lower is better)
Translates to: THVPSLMTATITATPPPHFTCLA*RSVLNR
Trigger: CCTGTTGAGCACACTCCTGCAAGCCAAACACGTGAA...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCGCTGTCCTGGGTGGTTaGATCCTTCATTTTCTGTCC +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSAVLGG*ILHFLS
Trigger: GGACAGAAAATGAAGGATGCAACCACCCAGGACAGC...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTCAGGGGTTGCAGCTCTaGAGACCTCCTGGTTATACA +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLQGLQL*RPPGYT
Trigger: TGTATAACCAGGAGGTCTGCAGAGCTGCAACCCCTG...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGCAGGGGTTGCAGCTCTaGAGACCTCCTGGTTATACA +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKQGLQL*RPPGYT
Trigger: TGTATAACCAGGAGGTCTGCAGAGCTGCAACCCCTG...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTATGTTCTTCAGGGGTTaGAGCTCTGCAGACCTCCTG +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLMFFRG*SSADLL
Trigger: CAGGAGGTCTGCAGAGCTGCAACCCCTGAAGAACAT...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGCTGGAGGTGGGGCCTaGTGGGAGATATTTGGGTCA +
Preference number: 4 (lower is better)
Translates to: KAGTAQHSASLISHLKGCAGGGA*WEIFGS
Trigger: TGACCCAAATATCTCCCAGCAGGCCCCACCTCCAGC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATTCTGGATATGAGAGCTaGCAAGCTCCAATCGTCCTG +
Preference number: 4 (lower is better)
Translates to: THVPSLMTATITATPPPHSGYES*QAPIVL
Trigger: CAGGACGATTGGAGCTTGGCAGCTCTCATATCCAGA...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTTCCTCCCGGTGGGCTTaGGGTCTTGCTGACTTCAAG +
Preference number: 4 (lower is better)
Translates to: KAGTAQHSASLISHLKGCSSRWA*GLADFK
Trigger: CTTGAAGTCAGCAAGACCGCAAGCCCACCGGGAGGA...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395275.7
ENST00000395276.6
CDS-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGACTCGGAGCGCGATCTaGGCGCGTGCCTCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGTRSAI*ARASLS
Trigger: GGACAGGGAGGCACGCGCCCAGATCGCGCTCCGAGT...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329008.9
CDS-3UTR CCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTTCATCAAAATCCACCTaGCCATCCCCGTCCATGTCC +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLSSKST*PSPSMS
Trigger: GGACATGGACGGGGATGGCCAGGTGGATTTTGATGA...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
CDS-3UTR CCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCCCTTCAAACTCTGTTTaGCAGTTCCCCGAGGTCTCA +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSPSNSV*QFPEVS
Trigger: TGAGACCTCGGGGAACTGCCAAACAGAGTTTGAAGG...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAAGCTGCAACACAGTGTaGCTGGCGGGAGGCTGCTAC +
Preference number: 4 (lower is better)
Translates to: TRSQADVDTLLKQPAELRSCNTV*LAGGCY
Trigger: GTAGCAGCCTCCCGCCAGCCACACTGTGTTGCAGCT...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATCTTGGGTTGAAAGAATaGGGAGTGGAGGTGACTGTG +
Preference number: 4 (lower is better)
Translates to: THVPSLMTATITATPPPHLGLKE*GVEVTV
Trigger: CACAGTCACCTCCACTCCCCATTCTTTCAACCCAAG...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGGAAGGAAGCCAGGGTaGGATGGAAAGCCCCCTCTT +
Preference number: 4 (lower is better)
Translates to: KAGTAQHSASLISHLKGCGRKPG*DGKPPL
Trigger: AAGAGGGGGCTTTCCATCCCACCCTGGCTTCCTTCC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGAATGCTGGTGCGGGATaGGCTCTAGGAACAGAAAGC +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKNAGAG*ALGTES
Trigger: GCTTTCTGTTCCTAGAGCCCATCCCGCACCAGCATT...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATCTCCATGACTCCAGATaGCTGGGTGTGGGTATCAAA +
Preference number: 4 (lower is better)
Translates to: THVPSLMTATITATPPPHLHDSR*LGVGIK
Trigger: TTTGATACCCACACCCAGCCATCTGGAGTCATGGAG...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGATCCCCCAGGCTCTTaGGAGCTTACATCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: KAGTAQHSASLISHLKGCDPPGS*ELTSAP
Trigger: GGGAGCAGATGTAAGCTCCCAAGAGCCTGGGGGATC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGCCATCTAAGTCCAGATaGGAGAGGGCAAACTGCCCA +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKPSKSR*ERANCP
Trigger: TGGGCAGTTTGCCCTCTCCCATCTGGACTTAGATGG...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTATGGATGTGGTTGGGTaGTTCGGGGGTCAGGGAAAA +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLMDVVG*FGGQGK
Trigger: TTTTCCCTGACCCCCGAACCACCCAACCACATCCAT...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGGGTCCTGCACCCCTATaGATGTGGTTGGGTGGTTCG +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEGPAPL*MWLGGS
Trigger: CGAACCACCCAACCACATCCATAGGGGTGCAGGACC...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGTTCCAGAAAACAGGATaGCGGCGCCTCTCCAGAACT +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKFQKTG*RRLSRT
Trigger: AGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAA...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGGAAGTCACTTCCAGCTaGGGCTACATGGCATCCCTT +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKEVTSS*GYMASL
Trigger: AAGGGATGCCATGTAGCCCCAGCTGGAAGTGACTTC...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGGGGTATCTGGAAAGGTaGGGCGCAGCTTCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEGYLER*GAASLG
Trigger: CCCCAAAGAAGCTGCGCCCCACCTTTCCAGATACCC...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTGTCAGATCAGTCACGTaGGACCCAAGCACATTCTGG +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLVRSVT*DPSTFW
Trigger: CCAGAATGTGCTTGGGTCCCACGTGACTGATCTGAC...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCGGGAGCTGTCCTGGGTaGTTGCATCCTTCATTTTCT +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSGSCPG*LHPSFS
Trigger: AGAAAATGAAGGATGCAACCACCCAGGACAGCTCCC...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATGCTCTGCAGACCTCCTaGTTATACAACCAGGATGTG +
Preference number: 4 (lower is better)
Translates to: THVPSLMTATITATPPPHALQTS*LYNQDV
Trigger: CACATCCTGGTTGTATAACCAGGAGGTCTGCAGAGC...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGGGACTCTTAGCTCCATaGGGATCACTGAAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKGLLAP*GSLKRP
Trigger: TGGCCTCTTCAGTGATCCCCATGGAGCTAAGAGTCC...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATGTGAGCCACCGCACCTaGTCCTTAATGCTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: THVPSLMTATITATPPPHVSHRT*SLMLLF
Trigger: GAAAAGAAGCATTAAGGACCAGGTGCGGTGGCTCAC...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAGTTGATCTCCAGTGCTaGAGGTGGGGCCTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: TRSQADVDTLLKQPAELRVDLQC*RWGLLG
Trigger: TCCCAGCAGGCCCCACCTCCAGCACTGGAGATCAAC...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGAGTCTATGCCCGGCATaGGGGTTGTGCTCAACTGAT +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKSLCPA*GLCSTD
Trigger: ATCAGTTGAGCACAACCCCCATGCCGGGCATAGACT...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGCCTGAGGAAAAGAGATaGGTGAGTCTATGCCCGGCA +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKPEEKR*VSLCPA
Trigger: TGCCGGGCATAGACTCACCCATCTCTTTTCCTCAGG...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTTGGGTGGAAGAGTCCTaGCTCCTGGGCTTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: KAGTAQHSASLISHLKGCWVEES*LLGFLQ
Trigger: CTGGAGAAAGCCCAGGAGCCAGGACTCTTCCACCCA...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGTCCTGGATTCAGAACTaGGGAAGAAAATCAGACCCC +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWSWIQN*GRKSDP
Trigger: GGGGTCTGATTTTCTTCCCCAGTTCTGAATCCAGGA...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 72 bp CTACGATCACAGCGACCCCTCCTCCCCATCCAACAGTaGACAGTTCACCAACCCAATGCCTGGACAGACTTT +
Preference number: 4 (lower is better)
Translates to: LRSQRPLLPIQQ*TVHQPNAWTDF
Trigger: AAAGTCTGTCCAGGCATTGGGTTGGTGAACTGTCAACTGTTGGATGGGGAGGAGGGGTCGCTGTGATCGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTCCTTGGGTTCTTTACTaGACGGTTCCATCGTCCGCA +
Preference number: 4 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSPWVLY*TVPSSA
Trigger: TGCGGACGATGGAACCGTTCAGTAAAGAACCCAAGG...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGCTTGGAACTGAGGGTTaGCCTCAGCAGAGAGTCTCC +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSELGTEG*PQQRVS
Trigger: GGAGACTCTCTGCTGAGGTCAACCCTCAGTTCCAAG...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGTGGAGGAGGGGGCTTTaGAGAATCATCCCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEWRRGL*RIIPGV
Trigger: AACCCCAGGGATGATTCTTCAAAGCCCCCTCCTCCA...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGAGGTTGCACTCAGGCTaGATTGGAGTGTTCTTTAAG +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWRLHSG*IGVFFK
Trigger: CTTAAAGAACACTCCAATTCAGCCTGAGTGCAACCT...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCCGCTTTATGATTCTATaGATGGGAAGTTGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSRFMIL*MGSWEG
Trigger: CCCCTCCCAACTTCCCATTCATAGAATCATAAAGCG...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGGAGGACAATCCCGAGTaGCTTAGTCAAAGCAAGTAT +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWEDNPE*LSQSKY
Trigger: ATACTTGCTTTGACTAAGTCACTCGGGATTGTCCTC...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTCAGATTCCTCATGAATaGCTCGGTGCCCTCCCTGTA +
Preference number: 4 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSQIPHE*LGALPV
Trigger: TACAGGGAGGGCACCGAGTCATTCATGAGGAATCTG...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCCGAGAAACACTAGTTTaGAAGCCAACCCATCACACC +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSRETLV*KPTHHT
Trigger: GGTGTGATGGGTTGGCTTTCAAACTAGTGTTTCTCG...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGAGGCATTCTGGGCTTaGCAGATGTCAGCATCCTCC +
Preference number: 4 (lower is better)
Translates to: KAGTAQHSASLISHLKGCEAFWA*QMSASS
Trigger: GGAGGATGCTGACATCTGTCAAGCCCAGAATGCCTC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTTCCCCATCCAACAGTTaGCAGTTCACCAACCCAATG +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLSPSNS*QFTNPM
Trigger: CATTGGGTTGGTGAACTGTCAACTGTTGGATGGGGA...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGCAATCGTCCTGGCCATaGTCAATCCCCAGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEQSSWP*SIPSCA
Trigger: AGCACAGCTGGGGATTGATCATGGCCAGGACGATTG...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATGGCTTATTCTGGATATaGGAGCTGCCAAGCTCCAAT +
Preference number: 4 (lower is better)
Translates to: THVPSLMTATITATPPPHGLFWI*ELPSSN
Trigger: ATTGGAGCTTGGCAGCTCTCATATCCAGAATAAGCC...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGTCTGCCCGCACGGCATaGACATGCGCGGTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGSARTA*TCAVSC
Trigger: GCAGCTCACCGCGCATGTGCATGCCGTGCGGGCAGA...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGTTATACCTGGATGGCTaGTGGAATTCCGAGATGAAG +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWLYLDG*WNSEMK
Trigger: CTTCATCTCGGAATTCCAGCAGCCATCCAGGTATAA...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGGAACAGAAAGCCAAGTaGCGACGGAAACTGAGAGCA +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKEQKAK*RRKLRA
Trigger: TGCTCTCAGTTTCCGTCGGCACTTGGCTTTCTGTTC...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGGAAAGTTTCTACAGCTaGCCTCAGGCTGTTGCCAGT +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKESFYS*PQAVAS
Trigger: ACTGGCAACAGCCTGAGGGCAGCTGTAGAAACTTTC...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTGTCTACTTAGGGTCCTaGACCCCTATGGATGTGGTT +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLVYLGS*TPMDVV
Trigger: AACCACATCCATAGGGGTGCAGGACCCTAAGTAGAC...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCGAAGTACTCATTTTCTaGCCTGAAGACCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSEVLIF*PEDQPQ
Trigger: CTGAGGCTGGTCTTCAGGGCAGAAAATGAGTACTTC...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATTTTCCTCCCTACTCCTaGACAGTGGCTAATCTCTCT +
Preference number: 4 (lower is better)
Translates to: THVPSLMTATITATPPPHFPPYS*TVANLS
Trigger: AGAGAGATTAGCCACTGTGCAGGAGTAGGGAGGAAA...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCATGGGGAGGGTGGGCTTaGTTCCAGGTCACTGGGAGC +
Preference number: 4 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPWGGWA*FQVTGS
Trigger: GCTCCCAGTGACCTGGAAGCAAGCCCACCCTCCCCA...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGGTGGAATGCAAGGGTTaGCATGGTAATATCCCTCTT +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWVECKG*HGNIPL
Trigger: AAGAGGGATATTACCATGGCAACCCTTGCATTCCAC...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGAAACTCAGGGTGGAATaGAAGGGTTGCCATGGTAAT +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWKLRVE*KGCHGN
Trigger: ATTACCATGGCAACCCTTGCATTCCACCCTGAGTTT...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTCCAGCAGGATACAGATaGAGAGAGTCAGGTTGCACT +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLPAGYR*RESGCT
Trigger: AGTGCAACCTGACTCTCTGCATCTGTATCCTGCTGG...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGGCTGTCCTGGGTGGTTaGATCCTTCATTTTCTGTCC +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKAVLGG*ILHFLS
Trigger: GGACAGAAAATGAAGGATGCAACCACCCAGGACAGC...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGCCGGCATGGGGGTTGTaGTCAACTGATGAACTACCC +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEPAWGL*STDELP
Trigger: GGGTAGTTCATCAGTTGAGCACAACCCCCATGCCGG...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGATCGCAGTTGCACCTTaGATTCCCTGGAATATTCCT +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWIAVAP*IPWNIP
Trigger: AGGAATATTCCAGGGAATGCAAGGTGCAACTGCGAT...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGGAGACTTGTGGATCCTaGAGCTGCTCTCTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEETCGS*SCSLPA
Trigger: GGCAGGAAGAGAGCAGCTGCAGGATCCACAAGTCTC...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTAGAGCCACTGGCTTGTaGAACTCTCCACCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: KAGTAQHSASLISHLKGCRATGL*NSPPGA
Trigger: AGCTCCTGGTGGAGAGTTGCACAAGCCAGTGGCTCT...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGATCCGTGTCTGCTGTGTaGAGGAAGAGTCTGCCCGCA +
Preference number: 4 (lower is better)
Translates to: TRSQADVDTLLKQPAELRSVSAV*RKSLPA
Trigger: TGCGGGCAGACTCTTCCTCCACACAGCAGACACGGA...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATATGACTCCAGATGGCTaGGTGTGGGTATCAAAACCT +
Preference number: 4 (lower is better)
Translates to: THVPSLMTATITATPPPHMTPDG*VWVSKP
Trigger: AGGTTTTGATACCCACACCCAGCCATCTGGAGTCAT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTTTGGTCTGGCCTTGCTaGGCTGAACTCCAGGAAGTT +
Preference number: 4 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSLVWPC*AELQEV
Trigger: AACTTCCTGGAGTTCAGCCCAGCAAGGCCAGACCAA...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTCCTACTCCTGCACAGTaGCTAATCTCTCTGCCAATG +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLPTPAQ*LISLPM
Trigger: CATTGGCAGAGAGATTAGCCACTGTGCAGGAGTAGG...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAGGGGCGCAGCTTCTTTaGGGATCAAGGGGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPGAQLL*GSRGSG
Trigger: CCCTGACCCCCTTGATCCCCAAAGAAGCTGCGCCCC...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCATGCTAGATTCTGTCTaGGGGCTTTGTGGGTATCTG +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSMLDSV*GLCGYL
Trigger: CAGATACCCACAAAGCCCCCAGACAGAATCTAGCAT...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTGGGAGCTGTCCTGGGTaGTTGCATCCTTCATTTTCT +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLGSCPG*LHPSFS
Trigger: AGAAAATGAAGGATGCAACCACCCAGGACAGCTCCC...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTACCAGGGAGCTGTCCTaGGTGGTTGCATCCTTCATT +
Preference number: 4 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSTRELS*VVASFI
Trigger: AATGAAGGATGCAACCACCCAGGACAGCTCCCTGGT...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGGTGAGCCACCGCACCTaGTCCTTAATGCTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKVSHRT*SLMLLF
Trigger: GAAAAGAAGCATTAAGGACCAGGTGCGGTGGCTCAC...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTAATTATCATGGAGACTaGGTCGGTAAGAGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLNYHGD*VGKRQP
Trigger: GGGCTGCCTCTTACCGACCCAGTCTCCATGATAATT...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCGGACTGTCTTGTGGGTaGGACTGGAAAAACCTCATT +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSGLSCG*DWKNLI
Trigger: AATGAGGTTTTTCCAGTCCCACCCACAAGACAGTCC...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTCCCCATGGCACTCAATaGCCTGCATGTTTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLPHGTQ*PACFQS
Trigger: ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGG...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTAACCTAGATAGTGGGTaGAAGAGTCCTGGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSNLDSG*KSPGSW
Trigger: CCAGGAGCCAGGACTCTTCCACCCACTATCTAGGTT...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGCTCTCTCCCTGGTCATaGGTGGGCCACATCAAAAGC +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSELSPWS*VGHIKS
Trigger: GCTTTTGATGTGGCCCACCCATGACCAGGGAGAGAG...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTGGGTTTTATGTTGCCTaGGGCAGAAGGGTTAGAGAC +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLGFYVA*GRRVRD
Trigger: GTCTCTAACCCTTCTGCCCCAGGCAACATAAAACCC...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCCACCAACCCAATGCCTaGACAGACTTTCTGAGTCTA +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSHQPNA*TDFLSL
Trigger: TAGACTCAGAAAGTCTGTCCAGGCATTGGGTTGGTG...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 72 bp CCCTGCCAAGGAGATGAAGCTGAAGTGCAACCCCAGTaGCACTCAACCTTGGGTTCTTTACTGAACGGTTCC +
Preference number: 4 (lower is better)
Translates to: PCQGDEAEVQPQ*HSTLGSLLNGS
Trigger: GGAACCGTTCAGTAAAGAACCCAAGGTTGAGTGCAACTGGGGTTGCACTTCAGCTTCATCTCCTTGGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 72 bp TCAGTCACGTGGGACCCAAGCACATTCTGGAAGCCATaGCTAATAGTCCCGATGCTAGATTCTGTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: SVTWDPSTFWKP*LIVPMLDSVWG
Trigger: CCCCCAGACAGAATCTAGCATCGGGACTATTAGCAATGGCTTCCAGAATGTGCTTGGGTCCCACGTGACTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGCCTTGGGTTCTTTACTaGACGGTTCCATCGTCCGCA +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEPWVLY*TVPSSA
Trigger: TGCGGACGATGGAACCGTTCAGTAAAGAACCCAAGG...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTCTTCTGTGGCAACCCTaGAGTCAGCCTCTTGGAACT +
Preference number: 4 (lower is better)
Translates to: KAGTAQHSASLISHLKGCLLWQP*SQPLGT
Trigger: AGTTCCAAGAGGCTGACTTCAGGGTTGCCACAGAAG...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGGCGATTAGGGAAGAATaGCATCACACACGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKAIREE*HHTRRS
Trigger: GCTTCTTCGTGTGTGATGTCATTCTTCCCTAATCGC...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGATTCATAGTAGTGGCTaGCATCTAGGAAAAGTCAGG +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWIHSSG*HLGKVR
Trigger: CCTGACTTTTCCTAGATGTCAGCCACTACTATGAAT...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTAGCATAAAATTTGTGTaGACAGGGCTGGGAGTTGGC +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLSIKFV*TGLGVG
Trigger: GCCAACTCCCAGCCCTGTTCACACAAATTTTATGCT...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTGGACAGAATGAGGGGTaGGCTATTCCCTCTCAATTC +
Preference number: 4 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSGQNEG*AIPSQF
Trigger: GAATTGAGAGGGAATAGCTCACCCCTCATTCTGTCC...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCAGGTTGCACTCAGGCTaGATTGGAGTGTTCTTTAAG +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSRLHSG*IGVFFK
Trigger: CTTAAAGAACACTCCAATTCAGCCTGAGTGCAACCT...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATAGGTTGCACTCAGGCTaGATTGGAGTGTTCTTTAAG +
Preference number: 4 (lower is better)
Translates to: THVPSLMTATITATPPPHRLHSG*IGVFFK
Trigger: CTTAAAGAACACTCCAATTCAGCCTGAGTGCAACCT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATTTGTCAAGTGAGATTTaGGACAGGGCAGGTATTGAG +
Preference number: 4 (lower is better)
Translates to: THVPSLMTATITATPPPHLSSEI*DRAGIE
Trigger: CTCAATACCTGCCCTGTCTCAAATCTCACTTGACAA...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTACTCCTGATCTTAAGTaGTCCACCTGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: KAGTAQHSASLISHLKGCTPDLK*STCLGL
Trigger: GAGGCCAAGGCAGGTGGATCACTTAAGATCAGGAGT...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTCAGATTCCTCATGAATaGCTCGGTGCCCTCCCTGTA +
Preference number: 4 (lower is better)
Translates to: KAGTAQHSASLISHLKGCQIPHE*LGALPV
Trigger: TACAGGGAGGGCACCGAGTCATTCATGAGGAATCTG...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAAGGAAAAGAGATGGGTaGGTCTATGCCCGGCATGGG +
Preference number: 4 (lower is better)
Translates to: TRSQADVDTLLKQPAELRRKRDG*VYARHG
Trigger: CCCATGCCGGGCATAGACTCACCCATCTCTTTTCCT...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGCCAACCCATCACACCTaGGGAAAAGAGATGGGTGAG +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEPTHHT*GKEMGE
Trigger: CTCACCCATCTCTTTTCCTCAGGTGTGATGGGTTGG...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTCAGAAAGCTCATCTTTaGTGCTCCCTCGAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSQKAHL*CSLESA
Trigger: TGCTGACTCGAGGGAGCATCAAAGATGAGCTTTCTG...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGCTTTGGGGAGGTGACTaGCTCCCTTTATTTTCACAC +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKLWGGD*LPLFSH
Trigger: GTGTGAAAATAAAGGGAGTCAGTCACCTCCCCAAAG...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGACGTCAGCGAAGGCACTaGGACTCTGTGTGCGGAATT +
Preference number: 4 (lower is better)
Translates to: TRSQADVDTLLKQPAELRRQRRH*DSVCGI
Trigger: AATTCCGCACACAGAGTCTCAGTGCCTTCGCTGACG...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395275.7
CDS-3UTR GCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGATCCATGTCCAAGCGCTaGATGATGATGGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: TRSQADVDTLLKQPAELRSMSKR*MMMASS
Trigger: GGAGCTGGCCATCATCATGCAGCGCTTGGACATGGA...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
CDS-3UTR GCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGTTCTGCTTCTGGGAATaGACTCCTTCAAACTCTGTT +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWFCFWE*TPSNSV
Trigger: AACAGAGTTTGAAGGAGTGCATTCCCAGAAGCAGAA...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGAAGTGCAACCCCAGTTaGACTCAACCTTGGGTTCTT +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKKCNPS*TQPWVL
Trigger: AAGAACCCAAGGTTGAGTGCAACTGGGGTTGCACTT...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCTTATACCTGGATGGCTaGTGGAATTCCGAGATGAAG +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSLYLDG*WNSEMK
Trigger: CTTCATCTCGGAATTCCAGCAGCCATCCAGGTATAA...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGTTCATGCCTCTCTCTTaGTCTCTCACCATTATACCT +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWFMPLS*SLTIIP
Trigger: AGGTATAATGGTGAGAGAGCAAGAGAGAGGCATGAA...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGACTGCAGGTTCCAAAATaGTGGTGCGGGATGGGCTCT +
Preference number: 4 (lower is better)
Translates to: TRSQADVDTLLKQPAELRLQVPK*WCGMGS
Trigger: AGAGCCCATCCCGCACCAGCATTTTGGAACCTGCAG...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGATTGGAGACCTTGGGTaGTCCAAGTCTGAAAAGGCA +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKIGDLG*SKSEKA
Trigger: TGCCTTTTCAGACTTGGAGCACCCAAGGTCTCCAAT...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATTATCCCTTCAAGATCTaGTATGCCCTCCCATCTAAG +
Preference number: 4 (lower is better)
Translates to: THVPSLMTATITATPPPHYPFKI*YALPSK
Trigger: CTTAGATGGGAGGGCATAGCAGATCTTGAAGGGATA...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTGAAGTACTCATTTTCTaGCCTGAAGACCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLEVLIF*PEDQPQ
Trigger: CTGAGGCTGGTCTTCAGGGCAGAAAATGAGTACTTC...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGTTTCCTCCCTACTCCTaGACAGTGGCTAATCTCTCT +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKFPPYS*TVANLS
Trigger: AGAGAGATTAGCCACTGTGCAGGAGTAGGGAGGAAA...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTTGCAGAGAGTCAGGTTaGACTCAGGCTGAATTGGAG +
Preference number: 4 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSCRESG*TQAELE
Trigger: CTCCAATTCAGCCTGAGTGCAACCTGACTCTCTGCA...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTGAGCTTAGCAGCTTCTaGAAGGAAGGAGAGCAAGGA +
Preference number: 4 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSELSSF*KEGEQG
Trigger: TCCTTGCTCTCCTTCCTTGCAGAAGCTGCTAAGCTC...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTATGTTCTTCAGGGGTTaGAGCTCTGCAGACCTCCTG +
Preference number: 4 (lower is better)
Translates to: KAGTAQHSASLISHLKGCMFFRG*SSADLL
Trigger: CAGGAGGTCTGCAGAGCTGCAACCCCTGAAGAACAT...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCATCGCAGTTGCACCTTaGATTCCCTGGAATATTCCT +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSIAVAP*IPWNIP
Trigger: AGGAATATTCCAGGGAATGCAAGGTGCAACTGCGAT...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTGAGCAATATCGCAGTTaGACCTTGCATTCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLEQYRS*TLHSLE
Trigger: TTCCAGGGAATGCAAGGTGCAACTGCGATATTGCTC...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGTTGAGTTCTTTCTTCTaGTCTCCTGGCCTCAGTTTA +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWLSSFF*SPGLSL
Trigger: TAAACTGAGGCCAGGAGAGCAGAAGAAAGAACTCAA...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGAGACTTTATCACAACTaGCTCTTGGGACTTGTGTTC +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWRLYHN*LLGLVF
Trigger: GAACACAAGTCCCAAGAGGCAGTTGTGATAAAGTCT...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAGAGACTTGTGGATCCTaGAGCTGCTCTCTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: TRSQADVDTLLKQPAELRETCGS*SCSLPA
Trigger: GGCAGGAAGAGAGCAGCTGCAGGATCCACAAGTCTC...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAAGAGCCACTGGCTTGTaGAACTCTCCACCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: TRSQADVDTLLKQPAELRRATGL*NSPPGA
Trigger: AGCTCCTGGTGGAGAGTTGCACAAGCCAGTGGCTCT...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGCATCTTTTCCCTGTGTaGGGAATTTATTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWHLFPV*GIYSFC
Trigger: GCAGAAGGAATAAATTCCGCACACAGGGAAAAGATG...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395276.6
CDS-3UTR CCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTCCTTCAAACTCTGTTTaGCAGTTCCCCGAGGTCTCA +
Preference number: 4 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSPSNSV*QFPEVS
Trigger: TGAGACCTCGGGGAACTGCCAAACAGAGTTTGAAGG...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAGCAACACAGTGTGGCTaGCGGGAGGCTGCTACTCCA +
Preference number: 4 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPATQCG*REAATP
Trigger: TGGAGTAGCAGCCTCCCGCCAGCCACACTGTGTTGC...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCACCATTATACCTGGATaGCTGCTGGAATTCCGAGAT +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSTIIPG*LLEFRD
Trigger: ATCTCGGAATTCCAGCAGCCATCCAGGTATAATGGT...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGTCTCACCATTATACCTaGATGGCTGCTGGAATTCCG +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKSHHYT*MAAGIP
Trigger: CGGAATTCCAGCAGCCATCCAGGTATAATGGTGAGA...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTCTTGGGTTGAAAGAATaGGGAGTGGAGGTGACTGTG +
Preference number: 4 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSLGLKE*GVEVTV
Trigger: CACAGTCACCTCCACTCCCCATTCTTTCAACCCAAG...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGTTGGTCTGGCCTTGCTaGGCTGAACTCCAGGAAGTT +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSELVWPC*AELQEV
Trigger: AACTTCCTGGAGTTCAGCCCAGCAAGGCCAGACCAA...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGCCATCTAAGTCCAGATaGGAGAGGGCAAACTGCCCA +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEPSKSR*ERANCP
Trigger: TGGGCAGTTTGCCCTCTCCCATCTGGACTTAGATGG...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGATGGATGTGGTTGGGTaGTTCGGGGGTCAGGGAAAA +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEMDVVG*FGGQGK
Trigger: TTTTCCCTGACCCCCGAACCACCCAACCACATCCAT...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCATCCCTGGGTGCCACATaGGGGGTTACCACAGTGGGA +
Preference number: 4 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPSLGAT*GVTTVG
Trigger: TCCCACTGTGGTAACCCCCCATGTGGCACCCAGGGA...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGGGGGCGCAGCTTCTTTaGGGATCAAGGGGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPGAQLL*GSRGSG
Trigger: CCCTGACCCCCTTGATCCCCAAAGAAGCTGCGCCCC...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAGGCTTTGTGGGTATCTaGAAAGGTGGGGCGCAGCTT +
Preference number: 4 (lower is better)
Translates to: TRSQADVDTLLKQPAELRGFVGI*KGGAQL
Trigger: AAGCTGCGCCCCACCTTTCCAGATACCCACAAAGCC...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCGACCCAAGCACATTCTaGAAGCCATTGCTAATAGTC +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSDPSTF*KPLLIV
Trigger: GACTATTAGCAATGGCTTCCAGAATGTGCTTGGGTC...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTTTGGCAAACTCAGGGTaGAATGCAAGGGTTGCCATG +
Preference number: 4 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSLANSG*NARVAM
Trigger: CATGGCAACCCTTGCATTCCACCCTGAGTTTGCCAA...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGCAAAGTTCACGTGTTTaGCTTGCAGGAGTGTGCTCA +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKQSSRV*LAGVCS
Trigger: TGAGCACACTCCTGCAAGCCAAACACGTGAACTTTG...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTCAAAGTTCACGTGTTTaGCTTGCAGGAGTGTGCTCA +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLQSSRV*LAGVCS
Trigger: TGAGCACACTCCTGCAAGCCAAACACGTGAACTTTG...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTTTGAGCAATCAGGTGTaGAGGGAAGATGGCTATGGT +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLLSNQV*REDGYG
Trigger: ACCATAGCCATCTTCCCTCCACACCTGATTGCTCAA...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATTTAAGAAAAGGAGACTaGCACCTCTTCTCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: THVPSLMTATITATPPPHLRKGD*HLFSSL
Trigger: GAGAGAGGAGAAGAGGTGCCAGTCTCCTTTTCTTAA...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGCTGCTGGGAGATATTTaGGTCATAGGGACAGATTCC +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKLLGDI*VIGTDS
Trigger: GGAATCTGTCCCTATGACCCAAATATCTCCCAGCAG...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGTCTTGTGGGTGGGACTaGAAAAACCTCATTCTTTGT +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWSCGWD*KNLILC
Trigger: ACAAAGAATGAGGTTTTTCCAGTCCCACCCACAAGA...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTACAGAGCCTTTCGTGTaGATCAGACTGATGGGCAGC +
Preference number: 4 (lower is better)
Translates to: KAGTAQHSASLISHLKGCTEPFV*IRLMGS
Trigger: GCTGCCCATCAGTCTGATCCACACGAAAGGCTCTGT...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAGCATCCTCCCAGGAATaGCGAGCTACCAGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPASSQE*RATSLL
Trigger: GAGCAGGCTGGTAGCTCGCCATTCCTGGGAGGATGC...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGATCACAACTGCCTCTTaGGACTTGTGTTCAAAAAGG +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWITTAS*DLCSKR
Trigger: CCTTTTTGAACACAAGTCCCAAGAGGCAGTTGTGAT...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTGGGTTTTATGTTGCCTaGGGCAGAAGGGTTAGAGAC +
Preference number: 4 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSGFYVA*GRRVRD
Trigger: GTCTCTAACCCTTCTGCCCCAGGCAACATAAAACCC...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGAGAGTTGAGAGCCACTaGCTTGTGCAACTCTCCACC +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSERVESH*LVQLST
Trigger: GGTGGAGAGTTGCACAAGCCAGTGGCTCTCAACTCT...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTTCCTGGATTCAGAACTaGGGAAGAAAATCAGACCCC +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLSWIQN*GRKSDP
Trigger: GGGGTCTGATTTTCTTCCCCAGTTCTGAATCCAGGA...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGTCCTGGATTCAGAACTaGGGAAGAAAATCAGACCCC +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKSWIQN*GRKSDP
Trigger: GGGGTCTGATTTTCTTCCCCAGTTCTGAATCCAGGA...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGCATGCACATGCGCGGTaGGCTGCAACACAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGHAHAR*AATQCG
Trigger: GCCACACTGTGTTGCAGCTCACCGCGCATGTGCATG...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAAATGGGGAGTGGAGGTaGCTGTGTGTTCATGCCTCT +
Preference number: 4 (lower is better)
Translates to: TRSQADVDTLLKQPAELRNGEWR*LCVHAS
Trigger: AGAGGCATGAACACACAGTCACCTCCACTCCCCATT...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGAGTGCCGACGGAAACTaGGAGCACCCCAGCTCTACC +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGSADGN*EHPSST
Trigger: GGTAGAGCTGGGGTGCTCTCAGTTTCCGTCGGCACT...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTGCGATTAGGGAAGAATaGCATCACACACGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSAIREE*HHTRRS
Trigger: GCTTCTTCGTGTGTGATGTCATTCTTCCCTAATCGC...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGCGTGGTGGGTCTCCATaGCTCCAGATGGCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGRGGSP*LQMAGC
Trigger: ACACCCAGCCATCTGGAGTCATGGAGACCCACCACG...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGGTCAGTTGCAGAATCTaGAGGCCAGAAGATCTTATG +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKVSCRI*RPEDLM
Trigger: CATAAGATCTTCTGGCCTTCAGATTCTGCAACTGAC...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCATTCATAGTAGTGGCTaGCATCTAGGAAAAGTCAGG +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSIHSSG*HLGKVR
Trigger: CCTGACTTTTCCTAGATGTCAGCCACTACTATGAAT...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGGATTACTGGCTAATCTaGCTACACAAGCTTGAATTC +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWDYWLI*LHKLEF
Trigger: GAATTCAAGCTTGTGTAGTCAGATTAGCCAGTAATC...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGACTTGCAGAGGTGAATaGGAAAACTTTCATTGGAGA +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWTCRGE*ENFHWR
Trigger: TCTCCAATGAAAGTTTTCTCATTCACCTCTGCAAGT...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGCCTCCATATTATGGCTaGAGCCTTAGTTTTACTTGT +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWPPYYG*SLSFTC
Trigger: ACAAGTAAAACTAAGGCTTCAGCCATAATATGGAGG...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTTTGTCAAGTGAGATTTaGGACAGGGCAGGTATTGAG +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLLSSEI*DRAGIE
Trigger: CTCAATACCTGCCCTGTCTCAAATCTCACTTGACAA...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGTCTGTACCATCACGGTaGTATAGGAAAAGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSESVPSR*YRKRGP
Trigger: AGGGCCCCTTTTCCTATATCACCGTGATGGTACAGA...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCGCTTGTTGGTGTAATTaGTCTCATTGCTCCAAACCA +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSACWCN*SHCSKP
Trigger: TGGTTTGGAGCAATGAGATCAATTACACCAACAAGC...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATTCTCTCGAGACCCTATaGAGAGTCCCAAATGAATAT +
Preference number: 4 (lower is better)
Translates to: THVPSLMTATITATPPPHSLETL*RVPNEY
Trigger: ATATTCATTTGGGACTCTTCATAGGGTCTCGAGAGA...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGGGCTTTAGAGAAACCTaGAGCCAGGGAGGAATGTCA +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEGFRET*SQGGMS
Trigger: TGACATTCCTCCCTGGCTTCAGGTTTCTCTAAAGCC...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTGGCTTATTCTGGATATaGGAGCTGCCAAGCTCCAAT +
Preference number: 4 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSGLFWI*ELPSSN
Trigger: ATTGGAGCTTGGCAGCTCTCATATCCAGAATAAGCC...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGCAGGTCTGTCTGTTCTaGTTCTGGGAATGCACTCCT +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEQVCLF*FWECTP
Trigger: AGGAGTGCATTCCCAGAAGCAGAACAGACAGACCTG...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGCGCACGGCATGCACATaGGCGGTGAGCTGCAACACA +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGRTACT*AVSCNT
Trigger: TGTGTTGCAGCTCACCGCGCATGTGCATGCCGTGCG...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGAACAGAAAGCCAAGTaGCGACGGAAACTGAGAGCA +
Preference number: 4 (lower is better)
Translates to: KAGTAQHSASLISHLKGCEQKAK*RRKLRA
Trigger: TGCTCTCAGTTTCCGTCGGCACTTGGCTTTCTGTTC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGTTGGGAGCTTACATCTaGTCCCTCCTCCATATTATG +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKLGAYI*SLLHIM
Trigger: CATAATATGGAGGAGGGAGCAGATGTAAGCTCCCAA...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGTATCCCTTCAAGATCTaGTATGCCCTCCCATCTAAG +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKYPFKI*YALPSK
Trigger: CTTAGATGGGAGGGCATAGCAGATCTTGAAGGGATA...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTCAGTCTGCAGAGGAATaGATTCTCCTAGATTTTCCC +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLQSAEE*ILLDFP
Trigger: GGGAAAATCTAGGAGAATGCATTCCTCTGCAGACTG...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGGGGCTGGGAGTTGGCTaGCTGACAAGGAAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPGLGVG*LTRKAS
Trigger: GGAAGCCTTCCTTGTCAGGCAGCCAACTCCCAGCCC...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGGTGGAATGCAAGGGTTaGCATGGTAATATCCCTCTT +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKVECKG*HGNIPL
Trigger: AAGAGGGATATTACCATGGCAACCCTTGCATTCCAC...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTAAACTCAGGGTGGAATaGAAGGGTTGCCATGGTAAT +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLKLRVE*KGCHGN
Trigger: ATTACCATGGCAACCCTTGCATTCCACCCTGAGTTT...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGTGGCTTGCAGGAGTGTaGTCAACAGGCAAACCGATA +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEWLAGV*STGKPI
Trigger: TATCGGTTTGCCTGTTGAGCACACTCCTGCAAGCCA...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGAACAGCCTGCAGAACTaGGAGCCAAATAAACCTCTT +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKNSLQN*EPNKPL
Trigger: AAGAGGTTTATTTGGCTCGCAGTTCTGCAGGCTGTT...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACATGTTGATCTCCAGTaGTGGAGGTGGGGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPHVDLQ*WRWGLL
Trigger: CAGCAGGCCCCACCTCCAGCACTGGAGATCAACATG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTGAGCAATATCGCAGTTaGACCTTGCATTCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSEQYRS*TLHSLE
Trigger: TTCCAGGGAATGCAAGGTGCAACTGCGATATTGCTC...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGAGTCATTTACTACTGTaGTTTGAGAGACAACTCACG +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWSHLLL*FERQLT
Trigger: CGTGAGTTGTCTCTCAAAGCACAGTAGTAAATGACT...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGCAACACAGTGTGGCTaGCGGGAGGCTGCTACTCCA +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGATQCG*REAATP
Trigger: TGGAGTAGCAGCCTCCCGCCAGCCACACTGTGTTGC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGAGCTGCAACACAGTGTaGCTGGCGGGAGGCTGCTAC +
Preference number: 4 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPSCNTV*LAGGCY
Trigger: GTAGCAGCCTCCCGCCAGCCACACTGTGTTGCAGCT...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTACCATTATACCTGGATaGCTGCTGGAATTCCGAGAT +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLTIIPG*LLEFRD
Trigger: ATCTCGGAATTCCAGCAGCCATCCAGGTATAATGGT...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGACCATTATACCTGGATaGCTGCTGGAATTCCGAGAT +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKTIIPG*LLEFRD
Trigger: ATCTCGGAATTCCAGCAGCCATCCAGGTATAATGGT...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGAGACAAGAAAGCTTCTaGTGGCTCGCTACTGGAAGG +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSERQESF*WLATGR
Trigger: CCTTCCAGTAGCGAGCCACCAGAAGCTTTCTTGTCT...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTAGACAAGAAAGCTTCTaGTGGCTCGCTACTGGAAGG +
Preference number: 4 (lower is better)
Translates to: KAGTAQHSASLISHLKGCRQESF*WLATGR
Trigger: CCTTCCAGTAGCGAGCCACCAGAAGCTTTCTTGTCT...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGCCCTATGGATGTGGTTaGGTGGTTCGGGGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPPYGCG*VVRGSG
Trigger: CCCTGACCCCCGAACCACCCAACCACATCCATAGGG...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAGGTCCTGCACCCCTATaGATGTGGTTGGGTGGTTCG +
Preference number: 4 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPGPAPL*MWLGGS
Trigger: CGAACCACCCAACCACATCCATAGGGGTGCAGGACC...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTTTGCTTCCAGGTCACTaGGAGCAAGAAGAAGGTCAC +
Preference number: 4 (lower is better)
Translates to: KAGTAQHSASLISHLKGCLLPGH*EQEEGH
Trigger: GTGACCTTCTTCTTGCTCCCAGTGACCTGGAAGCAA...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGGGCATCCCTTGGGCATaGGAGACCAGGACCTTCTGG +
Preference number: 4 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPGIPWA*ETRTFW
Trigger: CCAGAAGGTCCTGGTCTCCCATGCCCAAGGGATGCC...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTGACCCAAGCACATTCTaGAAGCCATTGCTAATAGTC +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLDPSTF*KPLLIV
Trigger: GACTATTAGCAATGGCTTCCAGAATGTGCTTGGGTC...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTTTGGCAAACTCAGGGTaGAATGCAAGGGTTGCCATG +
Preference number: 4 (lower is better)
Translates to: KAGTAQHSASLISHLKGCLANSG*NARVAM
Trigger: CATGGCAACCCTTGCATTCCACCCTGAGTTTGCCAA...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGTTTGGAGAAATAGTGTaGCAAAATGACCCAATAGGG +
Preference number: 4 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWFGEIV*QNDPIG
Trigger: CCCTATTGGGTCATTTTGCCACACTATTTCTCCAAA...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATTCTTGTGGGTGGGACTaGAAAAACCTCATTCTTTGT +
Preference number: 4 (lower is better)
Translates to: THVPSLMTATITATPPPHSCGWD*KNLILC
Trigger: ACAAAGAATGAGGTTTTTCCAGTCCCACCCACAAGA...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGACCTCAGGTCCAGGGATaGAGCAATATCGCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: TRSQADVDTLLKQPAELRPQVQG*SNIAVA
Trigger: TGCAACTGCGATATTGCTCCATCCCTGGACCTGAGG...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGCCCCATGGCACTCAATaGCCTGCATGTTTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEPHGTQ*PACFQS
Trigger: ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGG...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGCATCCTCCCAGGAATaGCGAGCTACCAGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGASSQE*RATSLL
Trigger: GAGCAGGCTGGTAGCTCGCCATTCCTGGGAGGATGC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTAGGGTTAGAGACTTGTaGATCCTGCAGCTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: KAGTAQHSASLISHLKGCRVRDL*ILQLLS
Trigger: AGAGAGCAGCTGCAGGATCCACAAGTCTCTAACCCT...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGGGTTTTATGTTGCCTaGGGCAGAAGGGTTAGAGAC +
Preference number: 4 (lower is better)
Translates to: KAGTAQHSASLISHLKGCGFYVA*GRRVRD
Trigger: GTCTCTAACCCTTCTGCCCCAGGCAACATAAAACCC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 72 bp GATGAAGCTGAAGTGCAACCCCAGTTGCACTCAACCTaGGGTTCTTTACTGAACGGTTCCATCGTCCGCATC +
Preference number: 4 (lower is better)
Translates to: DEAEVQPQLHST*GSLLNGSIVRI
Trigger: GATGCGGACGATGGAACCGTTCAGTAAAGAACCCAAGGTTGAGTGCAACTGGGGTTGCACTTCAGCTTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 72 bp TTGACCTCAGCAGAGAGTCTCCTGTTGACCCTTGGGTaGAAAGAATGGGGAGTGGAGGTGACTGTGTGTTCA +
Preference number: 4 (lower is better)
Translates to: LTSAESLLLTLG*KEWGVEVTVCS
Trigger: TGAACACACAGTCACCTCCACTCCCCATTCTTTCAACCCAAGGGTCAACAGGAGACTCTCTGCTGAGGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGACAGAGAGCGATCGGTTaGGGTAATTCCCCTTGTACA +
Preference number: 4 (lower is better)
Translates to: TRSQADVDTLLKQPAELRQRAIG*GNSPCT
Trigger: TGTACAAGGGGAATTACCTCAACCGATCGCTCTCTG...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
CDS-3UTR TCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGAAACCATTAAAGCACTaGAGACAGCCCTTTAGTGTC +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKKPLKH*RQPFSV
Trigger: GACACTAAAGGGCTGTCTTCAGTGCTTTAATGGTTT...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCATCAGCCTCTTGGAACTaGGGGTTGACCTCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPSASWN*GLTSAE
Trigger: CTCTGCTGAGGTCAACCCTCAGTTCCAAGAGGCTGA...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTGTCAGTTGCAGAATCTaGAGGCCAGAAGATCTTATG +
Preference number: 4 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSVSCRI*RPEDLM
Trigger: CATAAGATCTTCTGGCCTTCAGATTCTGCAACTGAC...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTGACTTGGAATGGTGTTaGAAACAGATCCTTGGATTC +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLDLEWC*KQILGF
Trigger: GAATCCAAGGATCTGTTTTCAACACCATTCCAAGTC...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCGATTACTGGCTAATCTaGCTACACAAGCTTGAATTC +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSDYWLI*LHKLEF
Trigger: GAATTCAAGCTTGTGTAGTCAGATTAGCCAGTAATC...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACTGGCCTTGCTGGGCTaGACTCCAGGAAGTTTTGCA +
Preference number: 4 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPLALLG*TPGSFA
Trigger: TGCAAAACTTCCTGGAGTTCAGCCCAGCAAGGCCAG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCATGGAGGAGGGGGCTTTaGAGAATCATCCCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPWRRGL*RIIPGV
Trigger: AACCCCAGGGATGATTCTTCAAAGCCCCCTCCTCCA...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGAGCATAAAATTTGTGTaGACAGGGCTGGGAGTTGGC +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSESIKFV*TGLGVG
Trigger: GCCAACTCCCAGCCCTGTTCACACAAATTTTATGCT...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGTCCGGAGGACAGAATaGGGGGTGAGCTATTCCCTC +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGVRRTE*GVSYSL
Trigger: GAGGGAATAGCTCACCCCTCATTCTGTCCTCCGGAC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGACACCCAGACATTTCTaGAACCACTGGGTTTGCCTA +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSETPRHF*NHWVCL
Trigger: TAGGCAAACCCAGTGGTTTCAGAAATGTCTGGGTGT...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTGAGGACAATCCCGAGTaGCTTAGTCAAAGCAAGTAT +
Preference number: 4 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSEDNPE*LSQSKY
Trigger: ATACTTGCTTTGACTAAGTCACTCGGGATTGTCCTC...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTAGTGCAATTCATGGGTaGAATCCAGACCCTCTCAGT +
Preference number: 4 (lower is better)
Translates to: KAGTAQHSASLISHLKGCSAIHG*NPDPLS
Trigger: ACTGAGAGGGTCTGGATTTCACCCATGAATTGCACT...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTCTTTGGGGAGGTGACTaGCTCCCTTTATTTTCACAC +
Preference number: 4 (lower is better)
Translates to: KAGTAQHSASLISHLKGCLWGGD*LPLFSH
Trigger: GTGTGAAAATAAAGGGAGTCAGTCACCTCCCCAAAG...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGCTCTCCACCAGGAGCTaGCAGGATCCTTTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPLSTRS*QDPFLA
Trigger: GGCCAAGAAAGGATCCTGTCAGCTCCTGGTGGAGAG...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGGCTTATTCTGGATATaGGAGCTGCCAAGCTCCAAT +
Preference number: 4 (lower is better)
Translates to: KAGTAQHSASLISHLKGCGLFWI*ELPSSN
Trigger: ATTGGAGCTTGGCAGCTCTCATATCCAGAATAAGCC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTCAAACTGCCAGAATATaGTGTCTATCGTGTTCCCAA +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLQTARI*CLSCSQ
Trigger: TTGGGAACACGATAGACAGCATATTCTGGCAGTTTG...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
CDS-3UTR GCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGTCTGCCCGCACGGCATaGACATGCGCGGTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: NIHQFALFHLQTADTKRESARTA*TCAVSC
Trigger: GCAGCTCACCGCGCATGTGCATGCCGTGCGGGCAGA...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCATCCTTGGTCTGGCCTTaGTGGGCTGAACTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPSLVWP*WAELQE
Trigger: TTCCTGGAGTTCAGCCCAGCAAGGCCAGACCAAGGA...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGGGAAAGGCAGGTTGCTaGCTCCTTGGTCTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPGKAGC*LLGLAL
Trigger: CAAGGCCAGACCAAGGAGGCAGCAACCTGCCTTTCC...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGCTCTCTCTAGCAGTCTaGAGAGGAATGCATTCTCCT +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSELSLAV*RGMHSP
Trigger: AGGAGAATGCATTCCTCTGCAGACTGCTAGAGAGAG...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAGGGGGTACCTGCTCTTaGAGCAAGAATGAGCCAACC +
Preference number: 4 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPGGTCS*SKNEPT
Trigger: GGTTGGCTCATTCTTGCTGCAAGAGCAGGTACCCCC...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTAAACTCAGGGTGGAATaGAAGGGTTGCCATGGTAAT +
Preference number: 4 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSKLRVE*KGCHGN
Trigger: ATTACCATGGCAACCCTTGCATTCCACCCTGAGTTT...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGACCAGCAGGATACAGATaGAGAGAGTCAGGTTGCACT +
Preference number: 4 (lower is better)
Translates to: TRSQADVDTLLKQPAELRPAGYR*RESGCT
Trigger: AGTGCAACCTGACTCTCTGCATCTGTATCCTGCTGG...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGTTCTTTAAGGGTAATTaGCTCTCCCAGCAGGATACA +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKFFKGN*LSQQDT
Trigger: TGTATCCTGCTGGGAGAGGCAATTACCCTTAAAGAA...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGATGGCTTGCAGGAGTGTaGTCAACAGGCAAACCGATA +
Preference number: 4 (lower is better)
Translates to: TRSQADVDTLLKQPAELRWLAGV*STGKPI
Trigger: TATCGGTTTGCCTGTTGAGCACACTCCTGCAAGCCA...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGCATGTTGATCTCCAGTaGTGGAGGTGGGGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPHVDLQ*WRWGLL
Trigger: CAGCAGGCCCCACCTCCAGCACTGGAGATCAACATG...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGGAGCAATATCGCAGTTaGACCTTGCATTCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEEQYRS*TLHSLE
Trigger: TTCCAGGGAATGCAAGGTGCAACTGCGATATTGCTC...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTTCAGAGGACAGCATCTaGAGCCCTTTAAGAACTTTC +
Preference number: 4 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSSEDSI*SPLRTF
Trigger: GAAAGTTCTTAAAGGGCTGCAGATGCTGTCCTCTGA...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTTTGAGTTCTTTCTTCTaGTCTCCTGGCCTCAGTTTA +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLLSSFF*SPGLSL
Trigger: TAAACTGAGGCCAGGAGAGCAGAAGAAAGAACTCAA...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTAGACTTTATCACAACTaGCTCTTGGGACTTGTGTTC +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLRLYHN*LLGLVF
Trigger: GAACACAAGTCCCAAGAGGCAGTTGTGATAAAGTCT...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATTCTCTTCTTGGAATCTaGCATTGTTTCCTCCAACTT +
Preference number: 4 (lower is better)
Translates to: THVPSLMTATITATPPPHSLLGI*HCFLQL
Trigger: AAGTTGGAGGAAACAATGGCAGATTCCAAGAAGAGA...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAGAGACTTGTGGATCCTaGAGCTGCTCTCTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPETCGS*SCSLPA
Trigger: GGCAGGAAGAGAGCAGCTGCAGGATCCACAAGTCTC...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGATCAATCCCCAGCTGTaGTTCTATTTACACCCAACA +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKINPQL*FYLHPT
Trigger: TGTTGGGTGTAAATAGAAGCACAGCTGGGGATTGAT...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGATCTGGATATGAGAGCTaGCAAGCTCCAATCGTCCTG +
Preference number: 4 (lower is better)
Translates to: TRSQADVDTLLKQPAELRSGYES*QAPIVL
Trigger: CAGGACGATTGGAGCTTGGCAGCTCTCATATCCAGA...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGACTTGGGTTGAAAGAATaGGGAGTGGAGGTGACTGTG +
Preference number: 4 (lower is better)
Translates to: TRSQADVDTLLKQPAELRLGLKE*GVEVTV
Trigger: CACAGTCACCTCCACTCCCCATTCTTTCAACCCAAG...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGGAAGGAAGCCAGGGTaGGATGGAAAGCCCCCTCTT +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGGRKPG*DGKPPL
Trigger: AAGAGGGGGCTTTCCATCCCACCCTGGCTTCCTTCC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTATGACTCCAGATGGCTaGGTGTGGGTATCAAAACCT +
Preference number: 4 (lower is better)
Translates to: KAGTAQHSASLISHLKGCMTPDG*VWVSKP
Trigger: AGGTTTTGATACCCACACCCAGCCATCTGGAGTCAT...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCATCCGGCATAGAGACGTaGTGGGTCTCCATGACTCCA +
Preference number: 4 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPSGIET*WVSMTP
Trigger: TGGAGTCATGGAGACCCACCACGTCTCTATGCCGGA...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCTTGAAAACAGATCCTTaGATTCAGTTCTCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSLKTDP*IQFSSP
Trigger: TGGGGAAGAGAACTGAATCCAAGGATCTGTTTTCAA...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGATCCCCCAGGCTCTTaGGAGCTTACATCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGDPPGS*ELTSAP
Trigger: GGGAGCAGATGTAAGCTCCCAAGAGCCTGGGGGATC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGATTGCTTCCAGGTCACTaGGAGCAAGAAGAAGGTCAC +
Preference number: 4 (lower is better)
Translates to: TRSQADVDTLLKQPAELRLLPGH*EQEEGH
Trigger: GTGACCTTCTTCTTGCTCCCAGTGACCTGGAAGCAA...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGAACAGGGCTGGGAGTTaGCTGCCTGACAAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGNRAGS*LPDKEG
Trigger: GCCTTCCTTGTCAGGCAGCCAACTCCCAGCCCTGTT...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGGGCAGCCAAGGTCACTaGTTCCTAAGTCCGGAGGAC +
Preference number: 4 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPGSQGH*FLSPED
Trigger: GTCCTCCGGACTTAGGAACCAGTGACCTTGGCTGCC...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGGGTATCTGGAAAGGTaGGGCGCAGCTTCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGGYLER*GAASLG
Trigger: CCCCAAAGAAGCTGCGCCCCACCTTTCCAGATACCC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTGACCCAAGCACATTCTaGAAGCCATTGCTAATAGTC +
Preference number: 4 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSDPSTF*KPLLIV
Trigger: GACTATTAGCAATGGCTTCCAGAATGTGCTTGGGTC...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCTTTGGAGAAATAGTGTaGCAAAATGACCCAATAGGG +
Preference number: 4 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSFGEIV*QNDPIG
Trigger: CCCTATTGGGTCATTTTGCCACACTATTTCTCCAAA...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATTTTGGAGAAATAGTGTaGCAAAATGACCCAATAGGG +
Preference number: 4 (lower is better)
Translates to: THVPSLMTATITATPPPHFGEIV*QNDPIG
Trigger: CCCTATTGGGTCATTTTGCCACACTATTTCTCCAAA...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAGCTCTGCAGACCTCCTaGTTATACAACCAGGATGTG +
Preference number: 4 (lower is better)
Translates to: TRSQADVDTLLKQPAELRALQTS*LYNQDV
Trigger: CACATCCTGGTTGTATAACCAGGAGGTCTGCAGAGC...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGACCCCATGGCACTCAATaGCCTGCATGTTTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: TRSQADVDTLLKQPAELRPHGTQ*PACFQS
Trigger: ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGG...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGTGGGTGGAAGAGTCCTaGCTCCTGGGCTTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPWVEES*LLGFLQ
Trigger: CTGGAGAAAGCCCAGGAGCCAGGACTCTTCCACCCA...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGATCACAACTGCCTCTTaGGACTTGTGTTCAAAAAGG +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKITTAS*DLCSKR
Trigger: CCTTTTTGAACACAAGTCCCAAGAGGCAGTTGTGAT...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATACAAGCATCTCTTCTTaGAATCTGCCATTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: THVPSLMTATITATPPPHTSISS*NLPLFP
Trigger: AGGAAACAATGGCAGATTCCAAGAAGAGATGCTTGT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAAGGGTTAGAGACTTGTaGATCCTGCAGCTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: TRSQADVDTLLKQPAELRRVRDL*ILQLLS
Trigger: AGAGAGCAGCTGCAGGATCCACAAGTCTCTAACCCT...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGGAAAAAGCTTCTTCCTaGATTCAGAACTGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKEKASS*IQNWGR
Trigger: TCTTCCCCAGTTCTGAATCCAGGAAGAAGCTTTTTC...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 72 bp CACAGAGGGAAAGTTTCTACAGCTGCCCTCAGGCTGTaGCCAGTAGCACTTGCAGAGGTGAATGAGAAAACT +
Preference number: 4 (lower is better)
Translates to: HRGKVSTAALRL*PVALAEVNEKT
Trigger: AGTTTTCTCATTCACCTCTGCAAGTGCTACTGGCAACAGCCTGAGGGCAGCTGTAGAAACTTTCCCTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 72 bp CCACACCTAAACCTCAGTTCACCAAAGTTCACGTGTTaGGCTTGCAGGAGTGTGCTCAACAGGCAAACCGAT +
Preference number: 4 (lower is better)
Translates to: PHLNLSSPKFTC*ACRSVLNRQTD
Trigger: ATCGGTTTGCCTGTTGAGCACACTCCTGCAAGCCAAACACGTGAACTTTGGTGAACTGAGGTTTAGGTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 72 bp AAGCTTTCTGAGGTCTCACCAGAAGCCAAGCAGATGTaGATACCTTGCTCAAACAGCCTGCAGAACTGCGAG +
Preference number: 4 (lower is better)
Translates to: KLSEVSPEAKQM*IPCSNSLQNCE
Trigger: CTCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGTGAGACCTCAGAAAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGTCAGCCTCTTGGAACTaGGGGTTGACCTCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGSASWN*GLTSAE
Trigger: CTCTGCTGAGGTCAACCCTCAGTTCCAAGAGGCTGA...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGGATTACTGGCTAATCTaGCTACACAAGCTTGAATTC +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKDYWLI*LHKLEF
Trigger: GAATTCAAGCTTGTGTAGTCAGATTAGCCAGTAATC...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGACTTGCAGAGGTGAATaGGAAAACTTTCATTGGAGA +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKTCRGE*ENFHWR
Trigger: TCTCCAATGAAAGTTTTCTCATTCACCTCTGCAAGT...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGCTGGCCTTGCTGGGCTaGACTCCAGGAAGTTTTGCA +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGLALLG*TPGSFA
Trigger: TGCAAAACTTCCTGGAGTTCAGCCCAGCAAGGCCAG...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAAGCATAAAATTTGTGTaGACAGGGCTGGGAGTTGGC +
Preference number: 4 (lower is better)
Translates to: TRSQADVDTLLKQPAELRSIKFV*TGLGVG
Trigger: GCCAACTCCCAGCCCTGTTCACACAAATTTTATGCT...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTTTGTCAAGTGAGATTTaGGACAGGGCAGGTATTGAG +
Preference number: 4 (lower is better)
Translates to: KAGTAQHSASLISHLKGCLSSEI*DRAGIE
Trigger: CTCAATACCTGCCCTGTCTCAAATCTCACTTGACAA...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGACGCTTTATGATTCTATaGATGGGAAGTTGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: TRSQADVDTLLKQPAELRRFMIL*MGSWEG
Trigger: CCCCTCCCAACTTCCCATTCATAGAATCATAAAGCG...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTACTGCTAGATTTAGGTaGAGAGCAACGTGCAAAACT +
Preference number: 4 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSTARFR*RATCKT
Trigger: AGTTTTGCACGTTGCTCTTCACCTAAATCTAGCAGT...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATGAGAATGTTCTGATTTaGGGTCTTTTAAGACAGATG +
Preference number: 4 (lower is better)
Translates to: THVPSLMTATITATPPPHENVLI*GLLRQM
Trigger: CATCTGTCTTAAAAGACCTCAAATCAGAACATTCTC...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAACTCCTGATCTTAAGTaGTCCACCTGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPTPDLK*STCLGL
Trigger: GAGGCCAAGGCAGGTGGATCACTTAAGATCAGGAGT...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTGAAGCTGAACAGTTGTaGCACTCAAATTATCATGGA +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLEAEQL*HSNYHG
Trigger: TCCATGATAATTTGAGTGTCACAACTGTTCAGCTTC...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGGAAGCTGAACAGTTGTaGCACTCAAATTATCATGGA +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKEAEQL*HSNYHG
Trigger: TCCATGATAATTTGAGTGTCACAACTGTTCAGCTTC...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGGAGGACAATCCCGAGTaGCTTAGTCAAAGCAAGTAT +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEEDNPE*LSQSKY
Trigger: ATACTTGCTTTGACTAAGTCACTCGGGATTGTCCTC...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGACGAGAAACACTAGTTTaGAAGCCAACCCATCACACC +
Preference number: 4 (lower is better)
Translates to: TRSQADVDTLLKQPAELRRETLV*KPTHHT
Trigger: GGTGTGATGGGTTGGCTTTCAAACTAGTGTTTCTCG...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTCCTCCAACTTTCTCCTaGATTCTGATTCACATGACC +
Preference number: 4 (lower is better)
Translates to: KAGTAQHSASLISHLKGCPPTFS*ILIHMT
Trigger: GGTCATGTGAATCAGAATTCAGGAGAAAGTTGGAGG...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGCAATCGTCCTGGCCATaGTCAATCCCCAGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPQSSWP*SIPSCA
Trigger: AGCACAGCTGGGGATTGATCATGGCCAGGACGATTG...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGTCCAGAGTTATCCTTTaGATGTCAAACTGCCAGAAT +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKSRVIL*MSNCQN
Trigger: ATTCTGGCAGTTTGACATGCAAAGGATAACTCTGGA...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
CDS-3UTR GCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGCTGCAGGTTCCAAAATaGTGGTGCGGGATGGGCTCT +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGLQVPK*WCGMGS
Trigger: AGAGCCCATCCCGCACCAGCATTTTGGAACCTGCAG...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGCAGTCTGCAGAGGAATaGATTCTCCTAGATTTTCCC +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEQSAEE*ILLDFP
Trigger: GGGAAAATCTAGGAGAATGCATTCCTCTGCAGACTG...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGGCAAAGCAGCCAGGGTaGAAGTCACCGGGACAAACT +
Preference number: 4 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPAKQPG*KSPGQT
Trigger: AGTTTGTCCCGGTGACTTGCACCCTGGCTGCTTTGC...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGGGGGGTACCTGCTCTTaGAGCAAGAATGAGCCAACC +
Preference number: 4 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPGGTCS*SKNEPT
Trigger: GGTTGGCTCATTCTTGCTGCAAGAGCAGGTACCCCC...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTAGGAAAATGCCTTCTTaGTCATCACTTGTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSRKMPS*SSLVLS
Trigger: GGAAAGCACAAGTGATGAGCAAGAAGGCATTTTCCT...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACAGGGGTTGCAGCTCTaGAGACCTCCTGGTTATACA +
Preference number: 4 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPQGLQL*RPPGYT
Trigger: TGTATAACCAGGAGGTCTGCAGAGCTGCAACCCCTG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGAACAGCCTGCAGAACTaGGAGCCAAATAAACCTCTT +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSENSLQN*EPNKPL
Trigger: AAGAGGTTTATTTGGCTCGCAGTTCTGCAGGCTGTT...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGACTTGCTCAAACAGCCTaGAGAACTGCGAGCCAAATA +
Preference number: 4 (lower is better)
Translates to: TRSQADVDTLLKQPAELRLAQTA*RTASQI
Trigger: TATTTGGCTCGCAGTTCTGCAGGCTGTTTGAGCAAG...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGTCTTGCTGTGTGACGTaGCTGCTCCCCCTTCACCTT +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGSCCVT*LLPLHL
Trigger: AAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGA...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGTCTTGCTGTGTGACGTaGCTGCTCCCCCTTCACCTT +
Preference number: 4 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPSCCVT*LLPLHL
Trigger: AAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGA...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGCCGGCATGGGGGTTGTaGTCAACTGATGAACTACCC +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGPAWGL*STDELP
Trigger: GGGTAGTTCATCAGTTGAGCACAACCCCCATGCCGG...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTTCTCTTCTTGGAATCTaGCATTGTTTCCTCCAACTT +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLSLLGI*HCFLQL
Trigger: AAGTTGGAGGAAACAATGGCAGATTCCAAGAAGAGA...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGGAGACTTGTGGATCCTaGAGCTGCTCTCTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPETCGS*SCSLPA
Trigger: GGCAGGAAGAGAGCAGCTGCAGGATCCACAAGTCTC...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGAGTCATTTACTACTGTaGTTTGAGAGACAACTCACG +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKSHLLL*FERQLT
Trigger: CGTGAGTTGTCTCTCAAAGCACAGTAGTAAATGACT...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTATCAATCCCCAGCTGTaGTTCTATTTACACCCAACA +
Preference number: 4 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSINPQL*FYLHPT
Trigger: TGTTGGGTGTAAATAGAAGCACAGCTGGGGATTGAT...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGCCGCTCCGGAGTATCTaGTTGGCTGCAATCAGCATG +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGPLRSI*LAAISM
Trigger: CATGCTGATTGCAGCCAACCAGATACTCCGGAGCGG...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGCCGCTCCGGAGTATCTaGTTGGCTGCAATCAGCATG +
Preference number: 4 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPPLRSI*LAAISM
Trigger: CATGCTGATTGCAGCCAACCAGATACTCCGGAGCGG...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAAATGCTGGTGCGGGATaGGCTCTAGGAACAGAAAGC +
Preference number: 4 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPNAGAG*ALGTES
Trigger: GCTTTCTGTTCCTAGAGCCCATCCCGCACCAGCATT...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGCCAGATGGCTGGGTGTaGGTATCAAAACCTCACCGC +
Preference number: 4 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPPDGWV*VSKPHR
Trigger: GCGGTGAGGTTTTGATACCCACACCCAGCCATCTGG...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGCCAGATGGCTGGGTGTaGGTATCAAAACCTCACCGC +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGPDGWV*VSKPHR
Trigger: GCGGTGAGGTTTTGATACCCACACCCAGCCATCTGG...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGTGTCTGGGGGCTTTGTaGGTATCTGGAAAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPCLGAL*VSGKVG
Trigger: CCCCACCTTTCCAGATACCCACAAAGCCCCCAGACA...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGGACCCAAGCACATTCTaGAAGCCATTGCTAATAGTC +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEDPSTF*KPLLIV
Trigger: GACTATTAGCAATGGCTTCCAGAATGTGCTTGGGTC...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGATTGAGCAATCAGGTGTaGAGGGAAGATGGCTATGGT +
Preference number: 4 (lower is better)
Translates to: TRSQADVDTLLKQPAELRLSNQV*REDGYG
Trigger: ACCATAGCCATCTTCCCTCCACACCTGATTGCTCAA...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTTTAAGAAAAGGAGACTaGCACCTCTTCTCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: KAGTAQHSASLISHLKGCLRKGD*HLFSSL
Trigger: GAGAGAGGAGAAGAGGTGCCAGTCTCCTTTTCTTAA...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGTTAAGAAAAGGAGACTaGCACCTCTTCTCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSELRKGD*HLFSSL
Trigger: GAGAGAGGAGAAGAGGTGCCAGTCTCCTTTTCTTAA...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAAGTCTATGCCCGGCATaGGGGTTGTGCTCAACTGAT +
Preference number: 4 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPSLCPA*GLCSTD
Trigger: ATCAGTTGAGCACAACCCCCATGCCGGGCATAGACT...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGTTTTTGGTTGGTCCTTaGAGAAAAAGCTTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKFLVGP*RKSFFL
Trigger: CAGGAAGAAGCTTTTTCTCCAAGGACCAACCAAAAA...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 72 bp CTAATCTCTCTGCCAATGAAATCTAACCCTCACCTCTaGAAGGGTCTCTGTTCTCCAGCAGGAGGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: LISLPMKSNPHL*KGLCSPAGGRR
Trigger: TCTTCTGCCTCCTGCTGGAGAACAGAGACCCTTCAAGAGGTGAGGGTTAGATTTCATTGGCAGAGAGATTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 72 bp TCAGGTCCAGGGATGGAGCAATATCGCAGTTGCACCTaGCATTCCCTGGAATATTCCTTCCTAATTAGCCTG +
Preference number: 4 (lower is better)
Translates to: SGPGMEQYRSCT*HSLEYSFLISL
Trigger: CAGGCTAATTAGGAAGGAATATTCCAGGGAATGCAAGGTGCAACTGCGATATTGCTCCATCCCTGGACCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACAGAGAGCGATCGGTTaGGGTAATTCCCCTTGTACA +
Preference number: 4 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPQRAIG*GNSPCT
Trigger: TGTACAAGGGGAATTACCTCAACCGATCGCTCTCTG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
CDS-3UTR TCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGAAACCATTAAAGCACTaGAGACAGCCCTTTAGTGTC +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEKPLKH*RQPFSV
Trigger: GACACTAAAGGGCTGTCTTCAGTGCTTTAATGGTTT...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGAATGGGGAGTGGAGGTaGCTGTGTGTTCATGCCTCT +
Preference number: 4 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPNGEWR*LCVHAS
Trigger: AGAGGCATGAACACACAGTCACCTCCACTCCCCATT...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAGTCAGTTGCAGAATCTaGAGGCCAGAAGATCTTATG +
Preference number: 4 (lower is better)
Translates to: TRSQADVDTLLKQPAELRVSCRI*RPEDLM
Trigger: CATAAGATCTTCTGGCCTTCAGATTCTGCAACTGAC...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGGACTTGGAATGGTGTTaGAAACAGATCCTTGGATTC +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEDLEWC*KQILGF
Trigger: GAATCCAAGGATCTGTTTTCAACACCATTCCAAGTC...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGACTTGGAATGGTGTTaGAAACAGATCCTTGGATTC +
Preference number: 4 (lower is better)
Translates to: KAGTAQHSASLISHLKGCDLEWC*KQILGF
Trigger: GAATCCAAGGATCTGTTTTCAACACCATTCCAAGTC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGAGACAGGGCAGGTATTaGGAAAGAAGACTCATAAGA +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSERQGRY*ERRLIR
Trigger: TCTTATGAGTCTTCTTTCTCAATACCTGCCCTGTCT...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTACTGTCTTTGATTTATaGCCTGAGTCTGGACTTAAA +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLTVFDL*PESGLK
Trigger: TTTAAGTCCAGACTCAGGTCATAAATCAAAGACAGT...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGACTGTCTTTGATTTATaGCCTGAGTCTGGACTTAAA +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKTVFDL*PESGLK
Trigger: TTTAAGTCCAGACTCAGGTCATAAATCAAAGACAGT...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTACTGCTAGATTTAGGTaGAGAGCAACGTGCAAAACT +
Preference number: 4 (lower is better)
Translates to: KAGTAQHSASLISHLKGCTARFR*RATCKT
Trigger: AGTTTTGCACGTTGCTCTTCACCTAAATCTAGCAGT...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGCCCTTCTGGGGCAGTTaGGCAATCAGGTGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: NIHQFALFHLQTADTKREPFWGS*AIRCGG
Trigger: CCCTCCACACCTGATTGCTCAACTGCCCCAGAAGGG...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAGAGGACAATCCCGAGTaGCTTAGTCAAAGCAAGTAT +
Preference number: 4 (lower is better)
Translates to: TRSQADVDTLLKQPAELREDNPE*LSQSKY
Trigger: ATACTTGCTTTGACTAAGTCACTCGGGATTGTCCTC...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGTCTCTCGAGACCCTATaGAGAGTCCCAAATGAATAT +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSESLETL*RVPNEY
Trigger: ATATTCATTTGGGACTCTTCATAGGGTCTCGAGAGA...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGCCAACCCATCACACCTaGGGAAAAGAGATGGGTGAG +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGPTHHT*GKEMGE
Trigger: CTCACCCATCTCTTTTCCTCAGGTGTGATGGGTTGG...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACAGAAAGCTCATCTTTaGTGCTCCCTCGAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPQKAHL*CSLESA
Trigger: TGCTGACTCGAGGGAGCATCAAAGATGAGCTTTCTG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGTTCCTTGGAGAGAGTTaGGAGCCACTGGCTTGTGCA +
Preference number: 4 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPFLGES*EPLACA
Trigger: TGCACAAGCCAGTGGCTCTCAACTCTCTCCAAGGAA...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTTTCTGCTTCTGGGAATaGACTCCTTCAAACTCTGTT +
Preference number: 4 (lower is better)
Translates to: KAGTAQHSASLISHLKGCFCFWE*TPSNSV
Trigger: AACAGAGTTTGAAGGAGTGCATTCCCAGAAGCAGAA...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGACATGCGCGGTGAGCTaGAACACAGTGTGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: NIHQFALFHLQTADTKRETCAVS*NTVWLA
Trigger: CGCCAGCCACACTGTGTTGCAGCTCACCGCGCATGT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGCGCACGGCATGCACATaGGCGGTGAGCTGCAACACA +
Preference number: 4 (lower is better)
Translates to: NIHQFALFHLQTADTKRERTACT*AVSCNT
Trigger: TGTGTTGCAGCTCACCGCGCATGTGCATGCCGTGCG...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGTTCATGCCTCTCTCTTaGTCTCTCACCATTATACCT +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEFMPLS*SLTIIP
Trigger: AGGTATAATGGTGAGAGAGCAAGAGAGAGGCATGAA...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAGAACAGAAAGCCAAGTaGCGACGGAAACTGAGAGCA +
Preference number: 4 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPEQKAK*RRKLRA
Trigger: TGCTCTCAGTTTCCGTCGGCACTTGGCTTTCTGTTC...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAGGGAGAAAGGCTCTCTaGAGGTTCCAAAATGCTGGT +
Preference number: 4 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPGRKAL*RFQNAG
Trigger: ACCAGCATTTTGGAACCTGCAGAGAGCCTTTCTCCC...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGAAAAATCCTACCCACTaGATAGAGACAAGAAAGCTT +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKKNPTH*IETRKL
Trigger: AAGCTTTCTTGTCTCTATGCAGTGGGTAGGATTTTT...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTAGGAAAATGCCTTCTTaGTCATCACTTGTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: KAGTAQHSASLISHLKGCRKMPS*SSLVLS
Trigger: GGAAAGCACAAGTGATGAGCAAGAAGGCATTTTCCT...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAGTGGAATGCAAGGGTTaGCATGGTAATATCCCTCTT +
Preference number: 4 (lower is better)
Translates to: TRSQADVDTLLKQPAELRVECKG*HGNIPL
Trigger: AAGAGGGATATTACCATGGCAACCCTTGCATTCCAC...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACCAGCAGGATACAGATaGAGAGAGTCAGGTTGCACT +
Preference number: 4 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPPAGYR*RESGCT
Trigger: AGTGCAACCTGACTCTCTGCATCTGTATCCTGCTGG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTTTCTTTAAGGGTAATTaGCTCTCCCAGCAGGATACA +
Preference number: 4 (lower is better)
Translates to: KAGTAQHSASLISHLKGCFFKGN*LSQQDT
Trigger: TGTATCCTGCTGGGAGAGGCAATTACCCTTAAAGAA...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCATGGCTTGCAGGAGTGTaGTCAACAGGCAAACCGATA +
Preference number: 4 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPWLAGV*STGKPI
Trigger: TATCGGTTTGCCTGTTGAGCACACTCCTGCAAGCCA...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCATTCACGTGTTTGGCTTaGAGGAGTGTGCTCAACAGG +
Preference number: 4 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPFTCLA*RSVLNR
Trigger: CCTGTTGAGCACACTCCTGCAAGCCAAACACGTGAA...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCATTCATTTTCTGTCCATaGCCTCATAGGGCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPFIFCP*PHRASG
Trigger: CCCTGAGGCCCTATGAGGGCATGGACAGAAAATGAA...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGCAGGGGTTGCAGCTCTaGAGACCTCCTGGTTATACA +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGQGLQL*RPPGYT
Trigger: TGTATAACCAGGAGGTCTGCAGAGCTGCAACCCCTG...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGATGTTCTTCAGGGGTTaGAGCTCTGCAGACCTCCTG +
Preference number: 4 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPMFFRG*SSADLL
Trigger: CAGGAGGTCTGCAGAGCTGCAACCCCTGAAGAACAT...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGTCTTGCTCCTGTTCTTaGTGTGTGACGTGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPSCSCS*CVTCLL
Trigger: GAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGA...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGATCAGAGGACAGCATCTaGAGCCCTTTAAGAACTTTC +
Preference number: 4 (lower is better)
Translates to: TRSQADVDTLLKQPAELRSEDSI*SPLRTF
Trigger: GAAAGTTCTTAAAGGGCTGCAGATGCTGTCCTCTGA...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTAACATATACTGGAAGTaGTGTTATAGTGGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: ESCSLSRKQDGGASPELLNIYWK*CYSGQK
Trigger: TTTCTGGCCACTATAACAGCACTTCCAGTATATGTT...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGTCATCAAAATCCACCTaGCCATCCCCGTCCATGTCC +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGSSKST*PSPSMS
Trigger: GGACATGGACGGGGATGGCCAGGTGGATTTTGATGA...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
CDS-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACTCCATGACTCCAGATaGCTGGGTGTGGGTATCAAA +
Preference number: 4 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPLHDSR*LGVGIK
Trigger: TTTGATACCCACACCCAGCCATCTGGAGTCATGGAG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAAGACAAGAAAGCTTCTaGTGGCTCGCTACTGGAAGG +
Preference number: 4 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPRQESF*WLATGR
Trigger: CCTTCCAGTAGCGAGCCACCAGAAGCTTTCTTGTCT...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGTTGGTCTGGCCTTGCTaGGCTGAACTCCAGGAAGTT +
Preference number: 4 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPLVWPC*AELQEV
Trigger: AACTTCCTGGAGTTCAGCCCAGCAAGGCCAGACCAA...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGGAAGTCACTTCCAGCTaGGGCTACATGGCATCCCTT +
Preference number: 4 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPEVTSS*GYMASL
Trigger: AAGGGATGCCATGTAGCCCCAGCTGGAAGTGACTTC...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGTCAGATCAGTCACGTaGGACCCAAGCACATTCTGG +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGVRSVT*DPSTFW
Trigger: CCAGAATGTGCTTGGGTCCCACGTGACTGATCTGAC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGGGACTCTTAGCTCCATaGGGATCACTGAAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPGLLAP*GSLKRP
Trigger: TGGCCTCTTCAGTGATCCCCATGGAGCTAAGAGTCC...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAGTGAGCCACCGCACCTaGTCCTTAATGCTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPVSHRT*SLMLLF
Trigger: GAAAAGAAGCATTAAGGACCAGGTGCGGTGGCTCAC...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATACTAAGAGAAATGCTTaGCTTGTTGGTGTAATTGAT +
Preference number: 4 (lower is better)
Translates to: THVPSLMTATITATPPPHTKRNA*LVGVID
Trigger: ATCAATTACACCAACAAGCCAAGCATTTCTCTTAGT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGTCTTGTGGGTGGGACTaGAAAAACCTCATTCTTTGT +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSESCGWD*KNLILC
Trigger: ACAAAGAATGAGGTTTTTCCAGTCCCACCCACAAGA...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGCCTGAGGAAAAGAGATaGGTGAGTCTATGCCCGGCA +
Preference number: 4 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPPEEKR*VSLCPA
Trigger: TGCCGGGCATAGACTCACCCATCTCTTTTCCTCAGG...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGTGCATCCTTTCCACTTaGACAATAACTTCTAACAGT +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKCILST*TITSNS
Trigger: ACTGTTAGAAGTTATTGTCCAAGTGGAAAGGATGCA...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGCCTCAGGTCCAGGGATaGAGCAATATCGCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGPQVQG*SNIAVA
Trigger: TGCAACTGCGATATTGCTCCATCCCTGGACCTGAGG...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGAGAGTTGAGAGCCACTaGCTTGTGCAACTCTCCACC +
Preference number: 4 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPRVESH*LVQLST
Trigger: GGTGGAGAGTTGCACAAGCCAGTGGCTCTCAACTCT...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTTGCTTTAATTTTCCTTaGAGAGAGTTGAGAGCCACT +
Preference number: 4 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSCFNFP*RELRAT
Trigger: AGTGGCTCTCAACTCTCTCCAAGGAAAATTAAAGCA...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGGAAAAAGCTTCTTCCTaGATTCAGAACTGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEEKASS*IQNWGR
Trigger: TCTTCCCCAGTTCTGAATCCAGGAAGAAGCTTTTTC...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAGGCCAAGAATGGTCATaGATTCATCAAAATCCACCT +
Preference number: 4 (lower is better)
Translates to: TRSQADVDTLLKQPAELRGQEWS*IHQNPP
Trigger: AGGTGGATTTTGATGAATTCATGACCATTCTTGGCC...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
CDS-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGACCATCGCGACCTTCTaGAGACACCAGTTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: NIHQFALFHLQTADTKRETIATF*RHQFGA
Trigger: GGCCCCAAACTGGTGTCTTCAGAAGGTCGCGATGGT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
CDS-3UTR TCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAGACTTGGAATGGTGTTaGAAACAGATCCTTGGATTC +
Preference number: 4 (lower is better)
Translates to: TRSQADVDTLLKQPAELRDLEWC*KQILGF
Trigger: GAATCCAAGGATCTGTTTTCAACACCATTCCAAGTC...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGCAAACTCTGAGCTCCTaGAGTCTAAGGAATGCCGCT +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGQTLSS*SLRNAA
Trigger: AGCGGCATTCCTTAGACTTCAGGAGCTCAGAGTTTG...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGGACAGAATGAGGGGTaGGCTATTCCCTCTCAATTC +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGGQNEG*AIPSQF
Trigger: GAATTGAGAGGGAATAGCTCACCCCTCATTCTGTCC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGGGACAGAATGAGGGGTaGGCTATTCCCTCTCAATTC +
Preference number: 4 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPGQNEG*AIPSQF
Trigger: GAATTGAGAGGGAATAGCTCACCCCTCATTCTGTCC...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACGCTTTATGATTCTATaGATGGGAAGTTGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPRFMIL*MGSWEG
Trigger: CCCCTCCCAACTTCCCATTCATAGAATCATAAAGCG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAGGATGTGTGACGTGCTaGAGTCTAAAAGTTTCATCT +
Preference number: 4 (lower is better)
Translates to: TRSQADVDTLLKQPAELRGCVTC*SLKVSS
Trigger: AGATGAAACTTTTAGACTTCAGCACGTCACACATCC...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAGCTTGTTGGTGTAATTaGTCTCATTGCTCCAAACCA +
Preference number: 4 (lower is better)
Translates to: TRSQADVDTLLKQPAELRACWCN*SHCSKP
Trigger: TGGTTTGGAGCAATGAGATCAATTACACCAACAAGC...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACGAGAAACACTAGTTTaGAAGCCAACCCATCACACC +
Preference number: 4 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPRETLV*KPTHHT
Trigger: GGTGTGATGGGTTGGCTTTCAAACTAGTGTTTCTCG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGTCCCCATCCAACAGTTaGCAGTTCACCAACCCAATG +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGSPSNS*QFTNPM
Trigger: CATTGGGTTGGTGAACTGTCAACTGTTGGATGGGGA...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGGCTGTTCGCTGTCACTaGCAGCAGAGAGCGATCGGT +
Preference number: 4 (lower is better)
Translates to: NIHQFALFHLQTADTKREAVRCH*QQRAIG
Trigger: ACCGATCGCTCTCTGCTGGCAGTGACAGCGAACAGC...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
CDS-3UTR GCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGACAAACTGCCAGAATATaGTGTCTATCGTGTTCCCAA +
Preference number: 4 (lower is better)
Translates to: TRSQADVDTLLKQPAELRQTARI*CLSCSQ
Trigger: TTGGGAACACGATAGACAGCATATTCTGGCAGTTTG...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
CDS-3UTR GCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGATTCTGCTTCTGGGAATaGACTCCTTCAAACTCTGTT +
Preference number: 4 (lower is better)
Translates to: TRSQADVDTLLKQPAELRFCFWE*TPSNSV
Trigger: AACAGAGTTTGAAGGAGTGCATTCCCAGAAGCAGAA...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGGAGGCTGCTACTCCATaGCGCTCCGGAGTATCTGGT +
Preference number: 4 (lower is better)
Translates to: NIHQFALFHLQTADTKREEAATP*RSGVSG
Trigger: ACCAGATACTCCGGAGCGGCATGGAGTAGCAGCCTC...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGTGTGGAGGAAGAGTCTaGCCGCACGGCATGCACATG +
Preference number: 4 (lower is better)
Translates to: NIHQFALFHLQTADTKRECGGRV*PHGMHM
Trigger: CATGTGCATGCCGTGCGGGCAGACTCTTCCTCCACA...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGATTCATGCCTCTCTCTTaGTCTCTCACCATTATACCT +
Preference number: 4 (lower is better)
Translates to: TRSQADVDTLLKQPAELRFMPLS*SLTIIP
Trigger: AGGTATAATGGTGAGAGAGCAAGAGAGAGGCATGAA...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGGGAGAAAGGCTCTCTaGAGGTTCCAAAATGCTGGT +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGGRKAL*RFQNAG
Trigger: ACCAGCATTTTGGAACCTGCAGAGAGCCTTTCTCCC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGAACTCCAGGAAGTTTTaGAGAGGGACCTGTGATCCC +
Preference number: 4 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPNSRKF*RGTCDP
Trigger: GGGATCACAGGTCCCTCTGCAAAACTTCCTGGAGTT...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGGTCTACTTAGGGTCCTaGACCCCTATGGATGTGGTT +
Preference number: 4 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPVYLGS*TPMDVV
Trigger: AACCACATCCATAGGGGTGCAGGACCCTAAGTAGAC...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGTCTACTTAGGGTCCTaGACCCCTATGGATGTGGTT +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGVYLGS*TPMDVV
Trigger: AACCACATCCATAGGGGTGCAGGACCCTAAGTAGAC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGCCAGCAGGATACAGATaGAGAGAGTCAGGTTGCACT +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGPAGYR*RESGCT
Trigger: AGTGCAACCTGACTCTCTGCATCTGTATCCTGCTGG...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGCTCTTTTGGATAACTaGAAGATCGTAGACCATTTG +
Preference number: 4 (lower is better)
Translates to: KAGTAQHSASLISHLKGCALLDN*KIVDHL
Trigger: CAAATGGTCTACGATCTTGCAGTTATCCAAAAGAGC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGCTGTCCTGGGTGGTTaGATCCTTCATTTTCTGTCC +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGAVLGG*ILHFLS
Trigger: GGACAGAAAATGAAGGATGCAACCACCCAGGACAGC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGAGATGGGTGAGTCTATaGCCGGCATGGGGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: NIHQFALFHLQTADTKRERWVSL*PAWGLC
Trigger: GCACAACCCCCATGCCGGGCATAGACTCACCCATCT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTAGTCATTTACTACTGTaGTTTGAGAGACAACTCACG +
Preference number: 4 (lower is better)
Translates to: KAGTAQHSASLISHLKGCSHLLL*FERQLT
Trigger: CGTGAGTTGTCTCTCAAAGCACAGTAGTAAATGACT...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGCTTGGGTTGAAAGAATaGGGAGTGGAGGTGACTGTG +
Preference number: 4 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPLGLKE*GVEVTV
Trigger: CACAGTCACCTCCACTCCCCATTCTTTCAACCCAAG...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAATGACTCCAGATGGCTaGGTGTGGGTATCAAAACCT +
Preference number: 4 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPMTPDG*VWVSKP
Trigger: AGGTTTTGATACCCACACCCAGCCATCTGGAGTCAT...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGGGTCCTGCACCCCTATaGATGTGGTTGGGTGGTTCG +
Preference number: 4 (lower is better)
Translates to: NIHQFALFHLQTADTKREGPAPL*MWLGGS
Trigger: CGAACCACCCAACCACATCCATAGGGGTGCAGGACC...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGCCTACTCCTGCACAGTaGCTAATCTCTCTGCCAATG +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGPTPAQ*LISLPM
Trigger: CATTGGCAGAGAGATTAGCCACTGTGCAGGAGTAGG...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGTTGCTTCCAGGTCACTaGGAGCAAGAAGAAGGTCAC +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGLLPGH*EQEEGH
Trigger: GTGACCTTCTTCTTGCTCCCAGTGACCTGGAAGCAA...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGTTGCTTCCAGGTCACTaGGAGCAAGAAGAAGGTCAC +
Preference number: 4 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPLLPGH*EQEEGH
Trigger: GTGACCTTCTTCTTGCTCCCAGTGACCTGGAAGCAA...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGGGAGCTGTCCTGGGTaGTTGCATCCTTCATTTTCT +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGGSCPG*LHPSFS
Trigger: AGAAAATGAAGGATGCAACCACCCAGGACAGCTCCC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGATGACTATGGGCCTTTaGAGAAATAGTGTGGCAAAA +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEMTMGL*RNSVAK
Trigger: TTTTGCCACACTATTTCTCCAAAGGCCCATAGTCAT...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGCTCTGCAGACCTCCTaGTTATACAACCAGGATGTG +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGALQTS*LYNQDV
Trigger: CACATCCTGGTTGTATAACCAGGAGGTCTGCAGAGC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGAATTATCATGGAGACTaGGTCGGTAAGAGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPNYHGD*VGKRQP
Trigger: GGGCTGCCTCTTACCGACCCAGTCTCCATGATAATT...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACTGCTGGGAGATATTTaGGTCATAGGGACAGATTCC +
Preference number: 4 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPLLGDI*VIGTDS
Trigger: GGAATCTGTCCCTATGACCCAAATATCTCCCAGCAG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGACTAAGAGAAATGCTTaGCTTGTTGGTGTAATTGAT +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKTKRNA*LVGVID
Trigger: ATCAATTACACCAACAAGCCAAGCATTTCTCTTAGT...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGCCCCATGGCACTCAATaGCCTGCATGTTTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPPHGTQ*PACFQS
Trigger: ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGG...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGTTACACCCAACATATTaGGGGCAATATACAAAATAC +
Preference number: 4 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKLHPTY*GQYTKY
Trigger: GTATTTTGTATATTGCCCCCAATATGTTGGGTGTAA...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 72 bp CGGACACCAAAAGAGAGACTTTATCACAACTGCCTCTaGGGACTTGTGTTCAAAAAGGAGCTCCCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: RTPKERLYHNCL*GLVFKKELPVP
Trigger: AGGAACTGGGAGCTCCTTTTTGAACACAAGTCCCAAGAGGCAGTTGTGATAAAGTCTCTCTTTTGGTGTCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGCTTGGAACTGAGGGTTaGCCTCAGCAGAGAGTCTCC +
Preference number: 4 (lower is better)
Translates to: NIHQFALFHLQTADTKRELGTEG*PQQRVS
Trigger: GGAGACTCTCTGCTGAGGTCAACCCTCAGTTCCAAG...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGACTGTCTTTGATTTATaGCCTGAGTCTGGACTTAAA +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSETVFDL*PESGLK
Trigger: TTTAAGTCCAGACTCAGGTCATAAATCAAAGACAGT...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGGAGAATGTTCTGATTTaGGGTCTTTTAAGACAGATG +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEENVLI*GLLRQM
Trigger: CATCTGTCTTAAAAGACCTCAAATCAGAACATTCTC...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAGAAGCTGAACAGTTGTaGCACTCAAATTATCATGGA +
Preference number: 4 (lower is better)
Translates to: TRSQADVDTLLKQPAELREAEQL*HSNYHG
Trigger: TCCATGATAATTTGAGTGTCACAACTGTTCAGCTTC...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGAGGAAAAGAGATGGGTaGGTCTATGCCCGGCATGGG +
Preference number: 4 (lower is better)
Translates to: NIHQFALFHLQTADTKRERKRDG*VYARHG
Trigger: CCCATGCCGGGCATAGACTCACCCATCTCTTTTCCT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGCGAGAAACACTAGTTTaGAAGCCAACCCATCACACC +
Preference number: 4 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPRETLV*KPTHHT
Trigger: GGTGTGATGGGTTGGCTTTCAAACTAGTGTTTCTCG...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGAGTGCAATTCATGGGTaGAATCCAGACCCTCTCAGT +
Preference number: 4 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPSAIHG*NPDPLS
Trigger: ACTGAGAGGGTCTGGATTTCACCCATGAATTGCACT...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGCTTTGGGGAGGTGACTaGCTCCCTTTATTTTCACAC +
Preference number: 4 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPLWGGD*LPLFSH
Trigger: GTGTGAAAATAAAGGGAGTCAGTCACCTCCCCAAAG...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGCAATCGTCCTGGCCATaGTCAATCCCCAGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: NIHQFALFHLQTADTKREQSSWP*SIPSCA
Trigger: AGCACAGCTGGGGATTGATCATGGCCAGGACGATTG...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGCTCTCTCTAGCAGTCTaGAGAGGAATGCATTCTCCT +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGLSLAV*RGMHSP
Trigger: AGGAGAATGCATTCCTCTGCAGACTGCTAGAGAGAG...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGGCAAAGCAGCCAGGGTaGAAGTCACCGGGACAAACT +
Preference number: 4 (lower is better)
Translates to: NIHQFALFHLQTADTKREAKQPG*KSPGQT
Trigger: AGTTTGTCCCGGTGACTTGCACCCTGGCTGCTTTGC...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGATCTCTTCTTGGAATCTaGCATTGTTTCCTCCAACTT +
Preference number: 4 (lower is better)
Translates to: TRSQADVDTLLKQPAELRSLLGI*HCFLQL
Trigger: AAGTTGGAGGAAACAATGGCAGATTCCAAGAAGAGA...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGTCTCACCATTATACCTaGATGGCTGCTGGAATTCCG +
Preference number: 4 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPSHHYT*MAAGIP
Trigger: CGGAATTCCAGCAGCCATCCAGGTATAATGGTGAGA...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGCAGGTTCCAAAATGCTaGTGCGGGATGGGCTCTAGG +
Preference number: 4 (lower is better)
Translates to: NIHQFALFHLQTADTKREQVPKC*CGMGSR
Trigger: CCTAGAGCCCATCCCGCACCAGCATTTTGGAACCTG...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGATTGAAAACAGATCCTTaGATTCAGTTCTCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: TRSQADVDTLLKQPAELRLKTDP*IQFSSP
Trigger: TGGGGAAGAGAACTGAATCCAAGGATCTGTTTTCAA...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGGGCTTTGTGGGTATCTaGAAAGGTGGGGCGCAGCTT +
Preference number: 4 (lower is better)
Translates to: NIHQFALFHLQTADTKREGFVGI*KGGAQL
Trigger: AAGCTGCGCCCCACCTTTCCAGATACCCACAAAGCC...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGATGCTAGATTCTGTCTaGGGGCTTTGTGGGTATCTG +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGMLDSV*GLCGYL
Trigger: CAGATACCCACAAAGCCCCCAGACAGAATCTAGCAT...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGTTGAGCAATCAGGTGTaGAGGGAAGATGGCTATGGT +
Preference number: 4 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPLSNQV*REDGYG
Trigger: ACCATAGCCATCTTCCCTCCACACCTGATTGCTCAA...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTACTAAGAGAAATGCTTaGCTTGTTGGTGTAATTGAT +
Preference number: 4 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSTKRNA*LVGVID
Trigger: ATCAATTACACCAACAAGCCAAGCATTTCTCTTAGT...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGGACTGTCTTGTGGGTaGGACTGGAAAAACCTCATT +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGGLSCG*DWKNLI
Trigger: AATGAGGTTTTTCCAGTCCCACCCACAAGACAGTCC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTTGCATCCTTTCCACTTaGACAATAACTTCTAACAGT +
Preference number: 4 (lower is better)
Translates to: KAGTAQHSASLISHLKGCCILST*TITSNS
Trigger: ACTGTTAGAAGTTATTGTCCAAGTGGAAAGGATGCA...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGCTCTCTCCCTGGTCATaGGTGGGCCACATCAAAAGC +
Preference number: 4 (lower is better)
Translates to: NIHQFALFHLQTADTKRELSPWS*VGHIKS
Trigger: GCTTTTGATGTGGCCCACCCATGACCAGGGAGAGAG...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGATGCTTTAATTTTCCTTaGAGAGAGTTGAGAGCCACT +
Preference number: 4 (lower is better)
Translates to: TRSQADVDTLLKQPAELRCFNFP*RELRAT
Trigger: AGTGGCTCTCAACTCTCTCCAAGGAAAATTAAAGCA...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGCACCAACCCAATGCCTaGACAGACTTTCTGAGTCTA +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGHQPNA*TDFLSL
Trigger: TAGACTCAGAAAGTCTGTCCAGGCATTGGGTTGGTG...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 72 bp GCCAATCTAGGTCTTTCCCAGGGAGAACAACAGGGCTaGTTAGAAAAACAATTACTGGGACGTCAGTCTACT +
Preference number: 4 (lower is better)
Translates to: ANLGLSQGEQQG*LEKQLLGRQST
Trigger: AGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTGTTGTTCTCCCTGGGAAAGACCTAGATTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGCCTTGGGTTCTTTACTaGACGGTTCCATCGTCCGCA +
Preference number: 4 (lower is better)
Translates to: NIHQFALFHLQTADTKREPWVLY*TVPSSA
Trigger: TGCGGACGATGGAACCGTTCAGTAAAGAACCCAAGG...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGCTTCTGTGGCAACCCTaGAGTCAGCCTCTTGGAACT +
Preference number: 4 (lower is better)
Translates to: NIHQFALFHLQTADTKRELLWQP*SQPLGT
Trigger: AGTTCCAAGAGGCTGACTTCAGGGTTGCCACAGAAG...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGACTCATTTTCTGCCCTaGAGACCAGCCTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: NIHQFALFHLQTADTKRETHFLP*RPASAA
Trigger: TGCAGCTGAGGCTGGTCTTCAGGGCAGAAAATGAGT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCATCTCTCGAGACCCTATaGAGAGTCCCAAATGAATAT +
Preference number: 4 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPSLETL*RVPNEY
Trigger: ATATTCATTTGGGACTCTTCATAGGGTCTCGAGAGA...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGCCAACCCATCACACCTaGGGAAAAGAGATGGGTGAG +
Preference number: 4 (lower is better)
Translates to: NIHQFALFHLQTADTKREPTHHT*GKEMGE
Trigger: CTCACCCATCTCTTTTCCTCAGGTGTGATGGGTTGG...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGTATCCCTTCAAGATCTaGTATGCCCTCCCATCTAAG +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGYPFKI*YALPSK
Trigger: CTTAGATGGGAGGGCATAGCAGATCTTGAAGGGATA...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGTATCCCTTCAAGATCTaGTATGCCCTCCCATCTAAG +
Preference number: 4 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPYPFKI*YALPSK
Trigger: CTTAGATGGGAGGGCATAGCAGATCTTGAAGGGATA...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGCAGTCTGCAGAGGAATaGATTCTCCTAGATTTTCCC +
Preference number: 4 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPQSAEE*ILLDFP
Trigger: GGGAAAATCTAGGAGAATGCATTCCTCTGCAGACTG...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAAGGAAAATGCCTTCTTaGTCATCACTTGTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPRKMPS*SSLVLS
Trigger: GGAAAGCACAAGTGATGAGCAAGAAGGCATTTTCCT...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGTGGAATGCAAGGGTTaGCATGGTAATATCCCTCTT +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGVECKG*HGNIPL
Trigger: AAGAGGGATATTACCATGGCAACCCTTGCATTCCAC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCATTCTTTAAGGGTAATTaGCTCTCCCAGCAGGATACA +
Preference number: 4 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPFFKGN*LSQQDT
Trigger: TGTATCCTGCTGGGAGAGGCAATTACCCTTAAAGAA...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGTCTTGCTCCTGTTCTTaGTGTGTGACGTGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: NIHQFALFHLQTADTKRESCSCS*CVTCLL
Trigger: GAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGA...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGAATGCTGGTGCGGGATaGGCTCTAGGAACAGAAAGC +
Preference number: 4 (lower is better)
Translates to: NIHQFALFHLQTADTKRENAGAG*ALGTES
Trigger: GCTTTCTGTTCCTAGAGCCCATCCCGCACCAGCATT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGATGGATGTGGTTGGGTaGTTCGGGGGTCAGGGAAAA +
Preference number: 4 (lower is better)
Translates to: NIHQFALFHLQTADTKREMDVVG*FGGQGK
Trigger: TTTTCCCTGACCCCCGAACCACCCAACCACATCCAT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGGAAGTCACTTCCAGCTaGGGCTACATGGCATCCCTT +
Preference number: 4 (lower is better)
Translates to: NIHQFALFHLQTADTKREEVTSS*GYMASL
Trigger: AAGGGATGCCATGTAGCCCCAGCTGGAAGTGACTTC...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGACTAAGAGAAATGCTTaGCTTGTTGGTGTAATTGAT +
Preference number: 4 (lower is better)
Translates to: QWPACFQSRPAIQRRPSETKRNA*LVGVID
Trigger: ATCAATTACACCAACAAGCCAAGCATTTCTCTTAGT...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAATCACAACTGCCTCTTaGGACTTGTGTTCAAAAAGG +
Preference number: 4 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPITTAS*DLCSKR
Trigger: CCTTTTTGAACACAAGTCCCAAGAGGCAGTTGTGAT...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 72 bp CAAAAGAGAGACTTTATCACAACTGCCTCTTGGGACTaGTGTTCAAAAAGGAGCTCCCAGTTCCTAGTGCAA +
Preference number: 4 (lower is better)
Translates to: QKRDFITTASWD*CSKRSSQFLVQ
Trigger: TTGCACTAGGAACTGGGAGCTCCTTTTTGAACACAAGTCCCAAGAGGCAGTTGTGATAAAGTCTCTCTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGGCCAAGAATGGTCATaGATTCATCAAAATCCACCT +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGGQEWS*IHQNPP
Trigger: AGGTGGATTTTGATGAATTCATGACCATTCTTGGCC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
CDS-3UTR TCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAACTTGCAGAGGTGAATaGGAAAACTTTCATTGGAGA +
Preference number: 4 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPTCRGE*ENFHWR
Trigger: TCTCCAATGAAAGTTTTCTCATTCACCTCTGCAAGT...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGAGACAGGGCAGGTATTaGGAAAGAAGACTCATAAGA +
Preference number: 4 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPRQGRY*ERRLIR
Trigger: TCTTATGAGTCTTCTTTCTCAATACCTGCCCTGTCT...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGGCTTGTTGGTGTAATTaGTCTCATTGCTCCAAACCA +
Preference number: 4 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPACWCN*SHCSKP
Trigger: TGGTTTGGAGCAATGAGATCAATTACACCAACAAGC...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGCTTGTTGGTGTAATTaGTCTCATTGCTCCAAACCA +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGACWCN*SHCSKP
Trigger: TGGTTTGGAGCAATGAGATCAATTACACCAACAAGC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGCAAACTGCCAGAATATaGTGTCTATCGTGTTCCCAA +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGQTARI*CLSCSQ
Trigger: TTGGGAACACGATAGACAGCATATTCTGGCAGTTTG...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
CDS-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCATCCAGAGTTATCCTTTaGATGTCAAACTGCCAGAAT +
Preference number: 4 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPSRVIL*MSNCQN
Trigger: ATTCTGGCAGTTTGACATGCAAAGGATAACTCTGGA...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
CDS-3UTR GCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGCAGGTCTGTCTGTTCTaGTTCTGGGAATGCACTCCT +
Preference number: 4 (lower is better)
Translates to: NIHQFALFHLQTADTKREQVCLF*FWECTP
Trigger: AGGAGTGCATTCCCAGAAGCAGAACAGACAGACCTG...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGGGGAGAAAGGCTCTCTaGAGGTTCCAAAATGCTGGT +
Preference number: 4 (lower is better)
Translates to: NIHQFALFHLQTADTKREGRKAL*RFQNAG
Trigger: ACCAGCATTTTGGAACCTGCAGAGAGCCTTTCTCCC...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGAACTCCAGGAAGTTTTaGAGAGGGACCTGTGATCCC +
Preference number: 4 (lower is better)
Translates to: NIHQFALFHLQTADTKRENSRKF*RGTCDP
Trigger: GGGATCACAGGTCCCTCTGCAAAACTTCCTGGAGTT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGTTCACGTGTTTGGCTTaGAGGAGTGTGCTCAACAGG +
Preference number: 4 (lower is better)
Translates to: NIHQFALFHLQTADTKREFTCLA*RSVLNR
Trigger: CCTGTTGAGCACACTCCTGCAAGCCAAACACGTGAA...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAGCTCTTTTGGATAACTaGAAGATCGTAGACCATTTG +
Preference number: 4 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPALLDN*KIVDHL
Trigger: CAAATGGTCTACGATCTTGCAGTTATCCAAAAGAGC...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGGAGCTTAGCAGCTTCTaGAAGGAAGGAGAGCAAGGA +
Preference number: 4 (lower is better)
Translates to: NIHQFALFHLQTADTKREELSSF*KEGEQG
Trigger: TCCTTGCTCTCCTTCCTTGCAGAAGCTGCTAAGCTC...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGAGACTTTATCACAACTaGCTCTTGGGACTTGTGTTC +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGRLYHN*LLGLVF
Trigger: GAACACAAGTCCCAAGAGGCAGTTGTGATAAAGTCT...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGATCAATCCCCAGCTGTaGTTCTATTTACACCCAACA +
Preference number: 4 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPINPQL*FYLHPT
Trigger: TGTTGGGTGTAAATAGAAGCACAGCTGGGGATTGAT...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGCCTTCAAACTCTGTTTaGCAGTTCCCCGAGGTCTCA +
Preference number: 4 (lower is better)
Translates to: NIHQFALFHLQTADTKREPSNSV*QFPEVS
Trigger: TGAGACCTCGGGGAACTGCCAAACAGAGTTTGAAGG...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGTTGGCAAACTCAGGGTaGAATGCAAGGGTTGCCATG +
Preference number: 4 (lower is better)
Translates to: NIHQFALFHLQTADTKRELANSG*NARVAM
Trigger: CATGGCAACCCTTGCATTCCACCCTGAGTTTGCCAA...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCATTTGGAGAAATAGTGTaGCAAAATGACCCAATAGGG +
Preference number: 4 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPFGEIV*QNDPIG
Trigger: CCCTATTGGGTCATTTTGCCACACTATTTCTCCAAA...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGAATTATCATGGAGACTaGGTCGGTAAGAGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: NIHQFALFHLQTADTKRENYHGD*VGKRQP
Trigger: GGGCTGCCTCTTACCGACCCAGTCTCCATGATAATT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGAGGGTTAGAGACTTGTaGATCCTGCAGCTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: NIHQFALFHLQTADTKRERVRDL*ILQLLS
Trigger: AGAGAGCAGCTGCAGGATCCACAAGTCTCTAACCCT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGGGGTTTTATGTTGCCTaGGGCAGAAGGGTTAGAGAC +
Preference number: 4 (lower is better)
Translates to: NIHQFALFHLQTADTKREGFYVA*GRRVRD
Trigger: GTCTCTAACCCTTCTGCCCCAGGCAACATAAAACCC...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCATGCTTTAATTTTCCTTaGAGAGAGTTGAGAGCCACT +
Preference number: 4 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPCFNFP*RELRAT
Trigger: AGTGGCTCTCAACTCTCTCCAAGGAAAATTAAAGCA...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGAAAAAGCTTCTTCCTaGATTCAGAACTGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGEKASS*IQNWGR
Trigger: TCTTCCCCAGTTCTGAATCCAGGAAGAAGCTTTTTC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGATTACACCCAACATATTaGGGGCAATATACAAAATAC +
Preference number: 4 (lower is better)
Translates to: TRSQADVDTLLKQPAELRLHPTY*GQYTKY
Trigger: GTATTTTGTATATTGCCCCCAATATGTTGGGTGTAA...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGATTACTGGCTAATCTaGCTACACAAGCTTGAATTC +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGDYWLI*LHKLEF
Trigger: GAATTCAAGCTTGTGTAGTCAGATTAGCCAGTAATC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGCCTCCATATTATGGCTaGAGCCTTAGTTTTACTTGT +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGPPYYG*SLSFTC
Trigger: ACAAGTAAAACTAAGGCTTCAGCCATAATATGGAGG...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGAGCATAAAATTTGTGTaGACAGGGCTGGGAGTTGGC +
Preference number: 4 (lower is better)
Translates to: NIHQFALFHLQTADTKRESIKFV*TGLGVG
Trigger: GCCAACTCCCAGCCCTGTTCACACAAATTTTATGCT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGGAAGTACTCATTTTCTaGCCTGAAGACCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: NIHQFALFHLQTADTKREEVLIF*PEDQPQ
Trigger: CTGAGGCTGGTCTTCAGGGCAGAAAATGAGTACTTC...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGCTTGCTCAAACAGCCTaGAGAACTGCGAGCCAAATA +
Preference number: 4 (lower is better)
Translates to: NIHQFALFHLQTADTKRELAQTA*RTASQI
Trigger: TATTTGGCTCGCAGTTCTGCAGGCTGTTTGAGCAAG...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAAACATATACTGGAAGTaGTGTTATAGTGGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPNIYWK*CYSGQK
Trigger: TTTCTGGCCACTATAACAGCACTTCCAGTATATGTT...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGTCTCACCATTATACCTaGATGGCTGCTGGAATTCCG +
Preference number: 4 (lower is better)
Translates to: NIHQFALFHLQTADTKRESHHYT*MAAGIP
Trigger: CGGAATTCCAGCAGCCATCCAGGTATAATGGTGAGA...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGTTGAAAACAGATCCTTaGATTCAGTTCTCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPLKTDP*IQFSSP
Trigger: TGGGGAAGAGAACTGAATCCAAGGATCTGTTTTCAA...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGACAAGCATCTCTTCTTaGAATCTGCCATTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGTSISS*NLPLFP
Trigger: AGGAAACAATGGCAGATTCCAAGAAGAGATGCTTGT...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGTTTTTGGTTGGTCCTTaGAGAAAAAGCTTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPFLVGP*RKSFFL
Trigger: CAGGAAGAAGCTTTTTCTCCAAGGACCAACCAAAAA...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 72 bp TGGACAATAACTTCTAACAGTGCGAGAAACACTAGTTaGAAAGCCAACCCATCACACCTGAGGAAAAGAGAT +
Preference number: 4 (lower is better)
Translates to: WTITSNSARNTS*KANPSHLRKRD
Trigger: ATCTCTTTTCCTCAGGTGTGATGGGTTGGCTTTCAAACTAGTGTTTCTCGCACTGTTAGAAGTTATTGTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 72 bp CGAGTCAGCAAGTCCTTAGAGAATAAACAAAACCTCTaGCCTGCAAGCTGTGACACATTTAACATACACCAA +
Preference number: 4 (lower is better)
Translates to: RVSKSLENKQNL*PASCDTFNIHQ
Trigger: TTGGTGTATGTTAAATGTGTCACAGCTTGCAGGCAAGAGGTTTTGTTTATTCTCTAAGGACTTGCTGACTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGTTATACCTGGATGGCTaGTGGAATTCCGAGATGAAG +
Preference number: 4 (lower is better)
Translates to: NIHQFALFHLQTADTKRELYLDG*WNSEMK
Trigger: CTTCATCTCGGAATTCCAGCAGCCATCCAGGTATAA...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGAAAAATCCTACCCACTaGATAGAGACAAGAAAGCTT +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGKNPTH*IETRKL
Trigger: AAGCTTTCTTGTCTCTATGCAGTGGGTAGGATTTTT...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGAACATATACTGGAAGTaGTGTTATAGTGGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPNIYWK*CYSGQK
Trigger: TTTCTGGCCACTATAACAGCACTTCCAGTATATGTT...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGTGCATCCTTTCCACTTaGACAATAACTTCTAACAGT +
Preference number: 4 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPCILST*TITSNS
Trigger: ACTGTTAGAAGTTATTGTCCAAGTGGAAAGGATGCA...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGGATGTATTAATATTCTaGATTTGGACCGGTTCTAGT +
Preference number: 4 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPDVLIF*IWTGSS
Trigger: ACTAGAACCGGTCCAAATGCAGAATATTAATACATC...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGATGTATTAATATTCTaGATTTGGACCGGTTCTAGT +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGDVLIF*IWTGSS
Trigger: ACTAGAACCGGTCCAAATGCAGAATATTAATACATC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGAGACTTTATCACAACTaGCTCTTGGGACTTGTGTTC +
Preference number: 4 (lower is better)
Translates to: NIHQFALFHLQTADTKRERLYHN*LLGLVF
Trigger: GAACACAAGTCCCAAGAGGCAGTTGTGATAAAGTCT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGATCAATCCCCAGCTGTaGTTCTATTTACACCCAACA +
Preference number: 4 (lower is better)
Translates to: NIHQFALFHLQTADTKREINPQL*FYLHPT
Trigger: TGTTGGGTGTAAATAGAAGCACAGCTGGGGATTGAT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGATCACAACTGCCTCTTaGGACTTGTGTTCAAAAAGG +
Preference number: 4 (lower is better)
Translates to: NIHQFALFHLQTADTKREITTAS*DLCSKR
Trigger: CCTTTTTGAACACAAGTCCCAAGAGGCAGTTGTGAT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGGAAAAAGCTTCTTCCTaGATTCAGAACTGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: NIHQFALFHLQTADTKREEKASS*IQNWGR
Trigger: TCTTCCCCAGTTCTGAATCCAGGAAGAAGCTTTTTC...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGTTACACCCAACATATTaGGGGCAATATACAAAATAC +
Preference number: 4 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGLHPTY*GQYTKY
Trigger: GTATTTTGTATATTGCCCCCAATATGTTGGGTGTAA...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
3UTR CAA 72 bp GTGAATTCTTACTTTATTAGTTCATGCAATTGCGGGTaGTTAAGAAAAGGAGACTGGCACCTCTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: VNSYFISSCNCG*LRKGDWHLFSS
Trigger: AGAGGAGAAGAGGTGCCAGTCTCCTTTTCTTAACAACCCGCAATTGCATGAACTAATAAAGTAAGAATTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGATGACTATGGGCCTTTaGAGAAATAGTGTGGCAAAA +
Preference number: 4 (lower is better)
Translates to: NIHQFALFHLQTADTKREMTMGL*RNSVAK
Trigger: TTTTGCCACACTATTTCTCCAAAGGCCCATAGTCAT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGTGCTTTAATTTTCCTTaGAGAGAGTTGAGAGCCACT +
Preference number: 4 (lower is better)
Translates to: NIHQFALFHLQTADTKRECFNFP*RELRAT
Trigger: AGTGGCTCTCAACTCTCTCCAAGGAAAATTAAAGCA...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGTTTTTGGTTGGTCCTTaGAGAAAAAGCTTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: NIHQFALFHLQTADTKREFLVGP*RKSFFL
Trigger: CAGGAAGAAGCTTTTTCTCCAAGGACCAACCAAAAA...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR TCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGACTGTCTTTGATTTATaGCCTGAGTCTGGACTTAAA +
Preference number: 4 (lower is better)
Translates to: NIHQFALFHLQTADTKRETVFDL*PESGLK
Trigger: TTTAAGTCCAGACTCAGGTCATAAATCAAAGACAGT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR GCA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGAAAAATCCTACCCACTaGATAGAGACAAGAAAGCTT +
Preference number: 4 (lower is better)
Translates to: NIHQFALFHLQTADTKREKNPTH*IETRKL
Trigger: AAGCTTTCTTGTCTCTATGCAGTGGGTAGGATTTTT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS GCA 90 bp GTGGAGGAAGAGTCTGCCCGCACGGCATGCACATGCGCGGTGAGCTaGAACACAGTGTGGCTGGCGGGAGGCTGCTACTCCATGCCGCTC +
Preference number: 5 (lower is better)
Translates to: VEEESARTACTCAVS*NTVWLAGGCYSMPL
Trigger: GAGCGGCATGGAGTAGCAGCCTCCCGCCAGCCACACTGTGTTGCAGCTCACCGCGCATGTGCATGCCGTGCGGGCAGACTCTTCCTCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS CCA 90 bp TCTGCCCGCACGGCATGCACATGCGCGGTGAGCTGCAACACAGTGTaGCTGGCGGGAGGCTGCTACTCCATGCCGCTCCGGAGTATCTGG +
Preference number: 5 (lower is better)
Translates to: SARTACTCAVSCNTV*LAGGCYSMPLRSIW
Trigger: CCAGATACTCCGGAGCGGCATGGAGTAGCAGCCTCCCGCCAGCCACACTGTGTTGCAGCTCACCGCGCATGTGCATGCCGTGCGGGCAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS TCA 90 bp GCTGTGTGGAGGAAGAGTCTGCCCGCACGGCATGCACATGCGCGGTaGGCTGCAACACAGTGTGGCTGGCGGGAGGCTGCTACTCCATGC +
Preference number: 5 (lower is better)
Translates to: AVWRKSLPARHAHAR*AATQCGWREAATPC
Trigger: GCATGGAGTAGCAGCCTCCCGCCAGCCACACTGTGTTGCAGCTCACCGCGCATGTGCATGCCGTGCGGGCAGACTCTTCCTCCACACAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS GCA 90 bp CGTGTCTGCTGTGTGGAGGAAGAGTCTGCCCGCACGGCATGCACATaGGCGGTGAGCTGCAACACAGTGTGGCTGGCGGGAGGCTGCTAC +
Preference number: 5 (lower is better)
Translates to: RVCCVEEESARTACT*AVSCNTVWLAGGCY
Trigger: GTAGCAGCCTCCCGCCAGCCACACTGTGTTGCAGCTCACCGCGCATGTGCATGCCGTGCGGGCAGACTCTTCCTCCACACAGCAGACACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS GCA 90 bp TGCACATGCGCGGTGAGCTGCAACACAGTGTGGCTGGCGGGAGGCTaGTACTCCATGCCGCTCCGGAGTATCTGGTTGGCTGCAATCAGC +
Preference number: 5 (lower is better)
Translates to: CTCAVSCNTVWLAGG*YSMPLRSIWLAAIS
Trigger: GCTGATTGCAGCCAACCAGATACTCCGGAGCGGCATGGAGTAGCAGCCTCCCGCCAGCCACACTGTGTTGCAGCTCACCGCGCATGTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS GCA 90 bp CTTAAAGATGGCGCGTCCGGAGTCGTCTGCTCCTCCCGGTGGGCTTaGGGTCTTGCTGACTTCAAGAACGAAGACGCAGACCGCGGCCGT +
Preference number: 5 (lower is better)
Translates to: LKDGASGVVCSSRWA*GLADFKNEDADRGR
Trigger: ACGGCCGCGGTCTGCGTCTTCGTTCTTGAAGTCAGCAAGACCGCAAGCCCACCGGGAGGAGCAGACGACTCCGGACGCGCCATCTTTAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395275.7
ENST00000395276.6
CDS-3UTR CAA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTCTTCCCCTCTCCGGGTaGCTCTGGCAGCCGCATCGG +
Preference number: 5 (lower is better)
Translates to: ESCSLSRKQDGGASPELLLPLSG*LWQPHR
Trigger: CCGATGCGGCTGCCAGAGCAACCCGGAGAGGGGAAG...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395275.7
CDS CCA 90 bp ACAGCTCTTAAAGATGGCGCGTCCGGAGTCGTCTGCTCCTCCCGGTaGGCTTGCGGTCTTGCTGACTTCAAGAACGAAGACGCAGACCGC +
Preference number: 5 (lower is better)
Translates to: TALKDGASGVVCSSR*ACGLADFKNEDADR
Trigger: GCGGTCTGCGTCTTCGTTCTTGAAGTCAGCAAGACCGCAAGCCCACCGGGAGGAGCAGACGACTCCGGACGCGCCATCTTTAAGAGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395275.7
ENST00000395276.6
CDS-3UTR CAA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCCAGGTTGCTGCCTCCTaGGTCTGGCCTTGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSQVAAS*VWPCWA
Trigger: AGCCCAGCAAGGCCAGACCAAGGAGGCAGCAACCTG...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCAGGGGGAAAGGCAGGTaGCTGCCTCCTTGGTCTGGC +
Preference number: 5 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSRGKGR*LPPWSG
Trigger: GCCAGACCAAGGAGGCAGCAACCTGCCTTTCCCCCT...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGCTGGGGAGGGTGGGCTaGCTTCCAGGTCACTGGGAG +
Preference number: 5 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKLGRVG*LPGHWE
Trigger: CTCCCAGTGACCTGGAAGCAAGCCCACCCTCCCCAG...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTCAGGTTGCTGCCTCCTaGGTCTGGCCTTGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: ESCSLSRKQDGGASPELLQVAAS*VWPCWA
Trigger: AGCCCAGCAAGGCCAGACCAAGGAGGCAGCAACCTG...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTAGGGGGAAAGGCAGGTaGCTGCCTCCTTGGTCTGGC +
Preference number: 5 (lower is better)
Translates to: ESCSLSRKQDGGASPELLRGKGR*LPPWSG
Trigger: GCCAGACCAAGGAGGCAGCAACCTGCCTTTCCCCCT...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCGCTACATGGCATCCCTaGGGCATGGGAGACCAGGAC +
Preference number: 5 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSATWHP*GMGDQD
Trigger: GTCCTGGTCTCCCATGCCCAAGGGATGCCATGTAGC...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS GCA 90 bp GCGGTGAGTGTTACAGCTCTTAAAGATGGCGCGTCCGGAGTCGTCTaGTCCTCCCGGTGGGCTTGCGGTCTTGCTGACTTCAAGAACGAA +
Preference number: 5 (lower is better)
Translates to: AVSVTALKDGASGVV*SSRWACGLADFKNE
Trigger: TTCGTTCTTGAAGTCAGCAAGACCGCAAGCCCACCGGGAGGAGCAGACGACTCCGGACGCGCCATCTTTAAGAGCTGTAACACTCACCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395275.7
ENST00000395276.6
CDS-3UTR CAA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGGGCATCTTTTCCCTCTaGCTGGGCCGGGGCTCCGCA +
Preference number: 5 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEGIFSL*LGRGSA
Trigger: TGCGGAGCCCCGGCCCAGCAAGAGGGAAAAGATGCC...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329008.9
CDS-3UTR CAA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTCCCCTATGGATGTGGTaGGGTGGTTCGGGGGTCAGG +
Preference number: 5 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSPLWMW*GGSGVR
Trigger: CCTGACCCCCGAACCACCCAACCACATCCATAGGGG...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGATGGAGGAGGGGGCTTaGAAGAATCATCCCTGGGGT +
Preference number: 5 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWMEEGA*KNHPWG
Trigger: ACCCCAGGGATGATTCTTCAAAGCCCCCTCCTCCAT...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTCTGGGGAGGGTGGGCTaGCTTCCAGGTCACTGGGAG +
Preference number: 5 (lower is better)
Translates to: KAGTAQHSASLISHLKGCLGRVG*LPGHWE
Trigger: CTCCCAGTGACCTGGAAGCAAGCCCACCCTCCCCAG...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGGCTACATGGCATCCCTaGGGCATGGGAGACCAGGAC +
Preference number: 5 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKATWHP*GMGDQD
Trigger: GTCCTGGTCTCCCATGCCCAAGGGATGCCATGTAGC...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGCCCCTTCTGGGGCAGTaGAGCAATCAGGTGTGGAGG +
Preference number: 5 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKPLLGQ*SNQVWR
Trigger: CCTCCACACCTGATTGCTCAACTGCCCCAGAAGGGG...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGTCCTTCAAACTCTGTTaGGCAGTTCCCCGAGGTCTC +
Preference number: 5 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWSFKLC*AVPRGL
Trigger: GAGACCTCGGGGAACTGCCAAACAGAGTTTGAAGGA...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGGAAGTGCAACCCCAGTaGCACTCAACCTTGGGTTCT +
Preference number: 5 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWEVQPQ*HSTLGS
Trigger: AGAACCCAAGGTTGAGTGCAACTGGGGTTGCACTTC...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGCTGTTGACCCTTGGGTaGAAAGAATGGGGAGTGGAG +
Preference number: 5 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWLLTLG*KEWGVE
Trigger: CTCCACTCCCCATTCTTTCAACCCAAGGGTCAACAG...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTAGGGGGAAAGGCAGGTaGCTGCCTCCTTGGTCTGGC +
Preference number: 5 (lower is better)
Translates to: KAGTAQHSASLISHLKGCRGKGR*LPPWSG
Trigger: GCCAGACCAAGGAGGCAGCAACCTGCCTTTCCCCCT...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTCCCCTATGGATGTGGTaGGGTGGTTCGGGGGTCAGG +
Preference number: 5 (lower is better)
Translates to: KAGTAQHSASLISHLKGCPLWMW*GGSGVR
Trigger: CCTGACCCCCGAACCACCCAACCACATCCATAGGGG...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCTTGAGAGCCACTGGCTaGTGCAACTCTCCACCAGGA +
Preference number: 5 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSLRATG*CNSPPG
Trigger: TCCTGGTGGAGAGTTGCACAAGCCAGTGGCTCTCAA...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGTTTCCTTGGAGAGAGTaGAGAGCCACTGGCTTGTGC +
Preference number: 5 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWFPWRE*RATGLC
Trigger: GCACAAGCCAGTGGCTCTCAACTCTCTCCAAGGAAA...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGTCTGAAGACACCAGTTaGGGGCCAAGAATGGTCATG +
Preference number: 5 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWSEDTS*GPRMVM
Trigger: CATGACCATTCTTGGCCCCAAACTGGTGTCTTCAGA...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
CDS-3UTR CAA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCTCCTTCAAACTCTGTTaGGCAGTTCCCCGAGGTCTC +
Preference number: 5 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSSFKLC*AVPRGL
Trigger: GAGACCTCGGGGAACTGCCAAACAGAGTTTGAAGGA...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCCTCCGGAGTATCTGGTaGGCTGCAATCAGCATGACA +
Preference number: 5 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSLRSIW*AAISMT
Trigger: TGTCATGCTGATTGCAGCCAACCAGATACTCCGGAG...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCGAAGTGCAACCCCAGTaGCACTCAACCTTGGGTTCT +
Preference number: 5 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSEVQPQ*HSTLGS
Trigger: AGAACCCAAGGTTGAGTGCAACTGGGGTTGCACTTC...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGCCTGAAGTCAGCCTCTaGGAACTGAGGGTTGACCTC +
Preference number: 5 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKPEVSL*ELRVDL
Trigger: GAGGTCAACCCTCAGTTCCAAGAGGCTGACTTCAGG...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGATGGAGGAGGGGGCTTaGAAGAATCATCCCTGGGGT +
Preference number: 5 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKMEEGA*KNHPWG
Trigger: ACCCCAGGGATGATTCTTCAAAGCCCCCTCCTCCAT...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGGCTACATGGCATCCCTaGGGCATGGGAGACCAGGAC +
Preference number: 5 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEATWHP*GMGDQD
Trigger: GTCCTGGTCTCCCATGCCCAAGGGATGCCATGTAGC...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGGATGTTCTTCAGGGGTaGCAGCTCTGCAGACCTCCT +
Preference number: 5 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKDVLQG*QLCRPP
Trigger: AGGAGGTCTGCAGAGCTGCAACCCCTGAAGAACATC...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGTGCCCGGCATGGGGGTaGTGCTCAACTGATGAACTA +
Preference number: 5 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKCPAWG*CSTDEL
Trigger: TAGTTCATCAGTTGAGCACAACCCCCATGCCGGGCA...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGACTGCCTCTTGGGACTaGTGTTCAAAAAGGAGCTCC +
Preference number: 5 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWTASWD*CSKRSS
Trigger: GGAGCTCCTTTTTGAACACAAGTCCCAAGAGGCAGT...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCAGAAGGGTTAGAGACTaGTGGATCCTGCAGCTGCTC +
Preference number: 5 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSRRVRD*WILQLL
Trigger: GAGCAGCTGCAGGATCCACAAGTCTCTAACCCTTCT...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGCTCCCCATCCAACAGTaGACAGTTCACCAACCCAAT +
Preference number: 5 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWLPIQQ*TVHQPN
Trigger: ATTGGGTTGGTGAACTGTCAACTGTTGGATGGGGAG...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCGCAGAGAGTCTCCTGTaGACCCTTGGGTTGAAAGAA +
Preference number: 5 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSAESLL*TLGLKE
Trigger: TTCTTTCAACCCAAGGGTCAACAGGAGACTCTCTGC...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGGTTCACGTGTTTGGCTaGCAGGAGTGTGCTCAACAG +
Preference number: 5 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKVHVFG*QECAQQ
Trigger: CTGTTGAGCACACTCCTGCAAGCCAAACACGTGAAC...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGTTGGGAGGGGCATTATaGTCAAAAGCAGCTGTCCAT +
Preference number: 5 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWLGGAL*SKAAVH
Trigger: ATGGACAGCTGCTTTTGACAATAATGCCCCTCCCAA...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCAGCTGTCCTGGGTGGTaGCATCCTTCATTTTCTGTC +
Preference number: 5 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSSCPGW*HPSFSV
Trigger: GACAGAAAATGAAGGATGCAACCACCCAGGACAGCT...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGGCAGATGTTGATACCTaGCTCAAACAGCCTGCAGAA +
Preference number: 5 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWADVDT*LKQPAE
Trigger: TTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGC...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGTTTCAGAGGACTGTCTaGTGGGTGGGACTGGAAAAA +
Preference number: 5 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWFQRTV*WVGLEK
Trigger: TTTTTCCAGTCCCACCCACAAGACAGTCCTCTGAAA...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGGCGAGAAACACTAGTTaGAAAGCCAACCCATCACAC +
Preference number: 5 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWARNTS*KANPSH
Trigger: GTGTGATGGGTTGGCTTTCAAACTAGTGTTTCTCGC...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGAGAGGCATTCTGGGCTaGACAGATGTCAGCATCCTC +
Preference number: 5 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKRGILG*TDVSIL
Trigger: GAGGATGCTGACATCTGTCAAGCCCAGAATGCCTCT...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTAGAGGCATTCTGGGCTaGACAGATGTCAGCATCCTC +
Preference number: 5 (lower is better)
Translates to: ESCSLSRKQDGGASPELLRGILG*TDVSIL
Trigger: GAGGATGCTGACATCTGTCAAGCCCAGAATGCCTCT...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCACTGCCTCTTGGGACTaGTGTTCAAAAAGGAGCTCC +
Preference number: 5 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSTASWD*CSKRSS
Trigger: GGAGCTCCTTTTTGAACACAAGTCCCAAGAGGCAGT...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTGAAGTGCAACCCCAGTaGCACTCAACCTTGGGTTCT +
Preference number: 5 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSEVQPQ*HSTLGS
Trigger: AGAACCCAAGGTTGAGTGCAACTGGGGTTGCACTTC...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATCTTTCATTGGAGACCTaGGGTGCTCCAAGTCTGAAA +
Preference number: 5 (lower is better)
Translates to: THVPSLMTATITATPPPHLSLET*GAPSLK
Trigger: TTTCAGACTTGGAGCACCCAAGGTCTCCAATGAAAG...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGATGGAGGAGGGGGCTTaGAAGAATCATCCCTGGGGT +
Preference number: 5 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEMEEGA*KNHPWG
Trigger: ACCCCAGGGATGATTCTTCAAAGCCCCCTCCTCCAT...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGACATTCTGGAAGCCATaGCTAATAGTCCCGATGCTA +
Preference number: 5 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWTFWKP*LIVPML
Trigger: TAGCATCGGGACTATTAGCAATGGCTTCCAGAATGT...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTCCAAAGTTCACGTGTTaGGCTTGCAGGAGTGTGCTC +
Preference number: 5 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSPKFTC*ACRSVL
Trigger: GAGCACACTCCTGCAAGCCAAACACGTGAACTTTGG...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATCTGAAACCACTGGGTTaGCCTAAGACCACACCTAAA +
Preference number: 5 (lower is better)
Translates to: THVPSLMTATITATPPPHLKPLG*PKTTPK
Trigger: TTTAGGTGTGGTCTTAGGCAAACCCAGTGGTTTCAG...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGGATGTTCTTCAGGGGTaGCAGCTCTGCAGACCTCCT +
Preference number: 5 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEDVLQG*QLCRPP
Trigger: AGGAGGTCTGCAGAGCTGCAACCCCTGAAGAACATC...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATGCAGATGTTGATACCTaGCTCAAACAGCCTGCAGAA +
Preference number: 5 (lower is better)
Translates to: THVPSLMTATITATPPPHADVDT*LKQPAE
Trigger: TTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGC...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGCTCTTCTCCTCTCTCTaGCTCCTGTTCTTGCTGTGT +
Preference number: 5 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKLFSSL*LLFLLC
Trigger: ACACAGCAAGAACAGGAGCAAGAGAGAGGAGAAGAG...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTCTCTTCTCCTCTCTCTaGCTCCTGTTCTTGCTGTGT +
Preference number: 5 (lower is better)
Translates to: ESCSLSRKQDGGASPELLLFSSL*LLFLLC
Trigger: ACACAGCAAGAACAGGAGCAAGAGAGAGGAGAAGAG...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTCCCCCAAATTTCATGTaGATCTCCAGTGCTGGAGGT +
Preference number: 5 (lower is better)
Translates to: ESCSLSRKQDGGASPELLPPNFM*ISSAGG
Trigger: ACCTCCAGCACTGGAGATCAACATGAAATTTGGGGG...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGCCCCCAAATTTCATGTaGATCTCCAGTGCTGGAGGT +
Preference number: 5 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKPPNFM*ISSAGG
Trigger: ACCTCCAGCACTGGAGATCAACATGAAATTTGGGGG...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGTGCCCGGCATGGGGGTaGTGCTCAACTGATGAACTA +
Preference number: 5 (lower is better)
Translates to: QWPACFQSRPAIQRRPSECPAWG*CSTDEL
Trigger: TAGTTCATCAGTTGAGCACAACCCCCATGCCGGGCA...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTTGCCCGGCATGGGGGTaGTGCTCAACTGATGAACTA +
Preference number: 5 (lower is better)
Translates to: KAGTAQHSASLISHLKGCCPAWG*CSTDEL
Trigger: TAGTTCATCAGTTGAGCACAACCCCCATGCCGGGCA...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTAGAGGCATTCTGGGCTaGACAGATGTCAGCATCCTC +
Preference number: 5 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSRGILG*TDVSIL
Trigger: GAGGATGCTGACATCTGTCAAGCCCAGAATGCCTCT...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTACTGCCTCTTGGGACTaGTGTTCAAAAAGGAGCTCC +
Preference number: 5 (lower is better)
Translates to: ESCSLSRKQDGGASPELLTASWD*CSKRSS
Trigger: GGAGCTCCTTTTTGAACACAAGTCCCAAGAGGCAGT...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGATTTACTACTGTGCTTaGAGAGACAACTCACGTCCC +
Preference number: 5 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWIYYCA*RDNSRP
Trigger: GGGACGTGAGTTGTCTCTCAAAGCACAGTAGTAAAT...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGTTCCAGAGTTATCCTTaGCATGTCAAACTGCCAGAA +
Preference number: 5 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWFQSYP*HVKLPE
Trigger: TTCTGGCAGTTTGACATGCAAAGGATAACTCTGGAA...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
CDS-3UTR CAA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGAAGTGCAACCCCAGTaGCACTCAACCTTGGGTTCT +
Preference number: 5 (lower is better)
Translates to: KAGTAQHSASLISHLKGCEVQPQ*HSTLGS
Trigger: AGAACCCAAGGTTGAGTGCAACTGGGGTTGCACTTC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTCTGTTGACCCTTGGGTaGAAAGAATGGGGAGTGGAG +
Preference number: 5 (lower is better)
Translates to: KAGTAQHSASLISHLKGCLLTLG*KEWGVE
Trigger: CTCCACTCCCCATTCTTTCAACCCAAGGGTCAACAG...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGCAGGTTGCTGCCTCCTaGGTCTGGCCTTGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGQVAAS*VWPCWA
Trigger: AGCCCAGCAAGGCCAGACCAAGGAGGCAGCAACCTG...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGAAGGAAAATGCCTTCTaGCTCATCACTTGTGCTTTC +
Preference number: 5 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWKENAF*LITCAF
Trigger: GAAAGCACAAGTGATGAGCAAGAAGGCATTTTCCTT...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATACATTCTGGAAGCCATaGCTAATAGTCCCGATGCTA +
Preference number: 5 (lower is better)
Translates to: THVPSLMTATITATPPPHTFWKP*LIVPML
Trigger: TAGCATCGGGACTATTAGCAATGGCTTCCAGAATGT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGTTCACGTGTTTGGCTaGCAGGAGTGTGCTCAACAG +
Preference number: 5 (lower is better)
Translates to: KAGTAQHSASLISHLKGCVHVFG*QECAQQ
Trigger: CTGTTGAGCACACTCCTGCAAGCCAAACACGTGAAC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGCTGAAACCACTGGGTTaGCCTAAGACCACACCTAAA +
Preference number: 5 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKLKPLG*PKTTPK
Trigger: TTTAGGTGTGGTCTTAGGCAAACCCAGTGGTTTCAG...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCTCTATGAATGGGAAGTaGGGAGGGGCATTATTGTCA +
Preference number: 5 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSSMNGK*GGALLS
Trigger: TGACAATAATGCCCCTCCCAACTTCCCATTCATAGA...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTCTCTTCTCCTCTCTCTaGCTCCTGTTCTTGCTGTGT +
Preference number: 5 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSLFSSL*LLFLLC
Trigger: ACACAGCAAGAACAGGAGCAAGAGAGAGGAGAAGAG...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGTGCCTTGGAGACGTTTaGAACAGTATTGTCATGTCT +
Preference number: 5 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWCLGDV*NSIVMS
Trigger: AGACATGACAATACTGTTCAAAACGTCTCCAAGGCA...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGTTTCAGAGGACTGTCTaGTGGGTGGGACTGGAAAAA +
Preference number: 5 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKFQRTV*WVGLEK
Trigger: TTTTTCCAGTCCCACCCACAAGACAGTCCTCTGAAA...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTAGAGGCATTCTGGGCTaGACAGATGTCAGCATCCTC +
Preference number: 5 (lower is better)
Translates to: KAGTAQHSASLISHLKGCRGILG*TDVSIL
Trigger: GAGGATGCTGACATCTGTCAAGCCCAGAATGCCTCT...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCAGTACCGTCCACACTTaGAGTTCTTTCTTCTGCTCT +
Preference number: 5 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSSTVHT*SSFFCS
Trigger: AGAGCAGAAGAAAGAACTCAAAGTGTGGACGGTACT...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTAGAAGGGTTAGAGACTaGTGGATCCTGCAGCTGCTC +
Preference number: 5 (lower is better)
Translates to: KAGTAQHSASLISHLKGCRRVRD*WILQLL
Trigger: GAGCAGCTGCAGGATCCACAAGTCTCTAACCCTTCT...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGATTGAGAGCCACTGGCTaGTGCAACTCTCCACCAGGA +
Preference number: 5 (lower is better)
Translates to: TRSQADVDTLLKQPAELRLRATG*CNSPPG
Trigger: TCCTGGTGGAGAGTTGCACAAGCCAGTGGCTCTCAA...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTCTCCCCATCCAACAGTaGACAGTTCACCAACCCAAT +
Preference number: 5 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSLPIQQ*TVHQPN
Trigger: ATTGGGTTGGTGAACTGTCAACTGTTGGATGGGGAG...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGTCTGAAGACACCAGTTaGGGGCCAAGAATGGTCATG +
Preference number: 5 (lower is better)
Translates to: QWPACFQSRPAIQRRPSESEDTS*GPRMVM
Trigger: CATGACCATTCTTGGCCCCAAACTGGTGTCTTCAGA...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
CDS-3UTR CAA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGATCCTTCAAACTCTGTTaGGCAGTTCCCCGAGGTCTC +
Preference number: 5 (lower is better)
Translates to: TRSQADVDTLLKQPAELRSFKLC*AVPRGL
Trigger: GAGACCTCGGGGAACTGCCAAACAGAGTTTGAAGGA...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGACTCCGGAGTATCTGGTaGGCTGCAATCAGCATGACA +
Preference number: 5 (lower is better)
Translates to: TRSQADVDTLLKQPAELRLRSIW*AAISMT
Trigger: TGTCATGCTGATTGCAGCCAACCAGATACTCCGGAG...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTCAGTTGCACTCAACCTaGGGTTCTTTACTGAACGGT +
Preference number: 5 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSQLHST*GSLLNG
Trigger: ACCGTTCAGTAAAGAACCCAAGGTTGAGTGCAACTG...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGCTGAAAATGAGTCAGTaGCAGAATCTGAAGGCCAGA +
Preference number: 5 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKLKMSQ*QNLKAR
Trigger: TCTGGCCTTCAGATTCTGCAACTGACTCATTTTCAG...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTCTTTCATTGGAGACCTaGGGTGCTCCAAGTCTGAAA +
Preference number: 5 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSLSLET*GAPSLK
Trigger: TTTCAGACTTGGAGCACCCAAGGTCTCCAATGAAAG...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGTCTAACCCTCACCTCTaGAAGGGTCTCTGTTCTCCA +
Preference number: 5 (lower is better)
Translates to: QWPACFQSRPAIQRRPSESNPHL*KGLCSP
Trigger: TGGAGAACAGAGACCCTTCAAGAGGTGAGGGTTAGA...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGACATTCTGGAAGCCATaGCTAATAGTCCCGATGCTA +
Preference number: 5 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKTFWKP*LIVPML
Trigger: TAGCATCGGGACTATTAGCAATGGCTTCCAGAATGT...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGACCAAAGTTCACGTGTTaGGCTTGCAGGAGTGTGCTC +
Preference number: 5 (lower is better)
Translates to: TRSQADVDTLLKQPAELRPKFTC*ACRSVL
Trigger: GAGCACACTCCTGCAAGCCAAACACGTGAACTTTGG...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGTCTATGAATGGGAAGTaGGGAGGGGCATTATTGTCA +
Preference number: 5 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKSMNGK*GGALLS
Trigger: TGACAATAATGCCCCTCCCAACTTCCCATTCATAGA...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCCGTGCAAAACTGTCTTaGATTTATGACCTGAGTCTG +
Preference number: 5 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSRAKLS*IYDLSL
Trigger: CAGACTCAGGTCATAAATCAAAGACAGTTTTGCACG...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGCCCCTTCTGGGGCAGTaGAGCAATCAGGTGTGGAGG +
Preference number: 5 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPPLLGQ*SNQVWR
Trigger: CCTCCACACCTGATTGCTCAACTGCCCCAGAAGGGG...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTCCCCCAAATTTCATGTaGATCTCCAGTGCTGGAGGT +
Preference number: 5 (lower is better)
Translates to: KAGTAQHSASLISHLKGCPPNFM*ISSAGG
Trigger: ACCTCCAGCACTGGAGATCAACATGAAATTTGGGGG...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTTATCGCAGTTGCACCTaGCATTCCCTGGAATATTCC +
Preference number: 5 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSYRSCT*HSLEYS
Trigger: GGAATATTCCAGGGAATGCAAGGTGCAACTGCGATA...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAGGAGCAATATCGCAGTaGCACCTTGCATTCCCTGGA +
Preference number: 5 (lower is better)
Translates to: TRSQADVDTLLKQPAELRGAISQ*HLAFPG
Trigger: TCCAGGGAATGCAAGGTGCAACTGCGATATTGCTCC...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGACTGCCTCTTGGGACTaGTGTTCAAAAAGGAGCTCC +
Preference number: 5 (lower is better)
Translates to: QWPACFQSRPAIQRRPSETASWD*CSKRSS
Trigger: GGAGCTCCTTTTTGAACACAAGTCCCAAGAGGCAGT...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCCCTTTATTTTCACACTaGCCAAGACAGACAGAAAGC +
Preference number: 5 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSPLFSH*PRQTES
Trigger: GCTTTCTGTCTGTCTTGGCAAGTGTGAAAATAAAGG...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGATTTCCTTGGAGAGAGTaGAGAGCCACTGGCTTGTGC +
Preference number: 5 (lower is better)
Translates to: TRSQADVDTLLKQPAELRFPWRE*RATGLC
Trigger: GCACAAGCCAGTGGCTCTCAACTCTCTCCAAGGAAA...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATGTTTTTGGTTGGTCCTaGGAGAAAAAGCTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: THVPSLMTATITATPPPHVFGWS*EKKLLP
Trigger: AGGAAGAAGCTTTTTCTCCAAGGACCAACCAAAAAC...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGAGTCATTGTTTTTGGTaGGTCCTTGGAGAAAAAGCT +
Preference number: 5 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWSHCFW*VLGEKA
Trigger: AGCTTTTTCTCCAAGGACCAACCAAAAACAATGACT...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGATTCCTTCTGCTGGGTaGTTGGTCTCGCCGACTTTA +
Preference number: 5 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEIPSAG*LVSPTL
Trigger: TAAAGTCGGCGAGACCAACAACCCAGCAGAAGGAAT...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395275.7
ENST00000395276.6
CDS-3UTR CAA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCAGGCTCTCTTCCTCATaGATAATGATGTTCTCAATG +
Preference number: 5 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSRLSSS*IMMFSM
Trigger: CATTGAGAACATCATTATCAATGAGGAAGAGAGCCT...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAGCAGAGAGTCTCCTGTaGACCCTTGGGTTGAAAGAA +
Preference number: 5 (lower is better)
Translates to: TRSQADVDTLLKQPAELRAESLL*TLGLKE
Trigger: TTCTTTCAACCCAAGGGTCAACAGGAGACTCTCTGC...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATAGACTTGGAATGGTGTaGAAAACAGATCCTTGGATT +
Preference number: 5 (lower is better)
Translates to: THVPSLMTATITATPPPHRLGMV*KTDPWI
Trigger: AATCCAAGGATCTGTTTTCAACACCATTCCAAGTCT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCAATAAAGACCTGAGCTaGGAAAAGTACAAAGGGAAC +
Preference number: 5 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSNKDLS*EKYKGN
Trigger: GTTCCCTTTGTACTTTTCCAAGCTCAGGTCTTTATT...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGAAGGAAAATGCCTTCTaGCTCATCACTTGTGCTTTC +
Preference number: 5 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKKENAF*LITCAF
Trigger: GAAAGCACAAGTGATGAGCAAGAAGGCATTTTCCTT...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp ACTCACGTCCCAAGTCTAATGACCGCTACGATCACAGCGACCCCTCCTCCCCATAAATGTTCCCTATTTTaGTGTGCCTTGGCAAACTCA +
Preference number: 5 (lower is better)
Translates to: THVPSLMTATITATPPPHKCSLF*CALANS
Trigger: TGAGTTTGCCAAGGCACACAAAAATAGGGAACATTT...ATGGGGAGGAGGGGTCGCTGTGATCGTAGCGGTCATTAGACTTGGGACGTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGCTGAAACCACTGGGTTaGCCTAAGACCACACCTAAA +
Preference number: 5 (lower is better)
Translates to: QWPACFQSRPAIQRRPSELKPLG*PKTTPK
Trigger: TTTAGGTGTGGTCTTAGGCAAACCCAGTGGTTTCAG...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGACTCTTCTCCTCTCTCTaGCTCCTGTTCTTGCTGTGT +
Preference number: 5 (lower is better)
Translates to: TRSQADVDTLLKQPAELRLFSSL*LLFLLC
Trigger: ACACAGCAAGAACAGGAGCAAGAGAGAGGAGAAGAG...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTTGCCTTGGAGACGTTTaGAACAGTATTGTCATGTCT +
Preference number: 5 (lower is better)
Translates to: ESCSLSRKQDGGASPELLCLGDV*NSIVMS
Trigger: AGACATGACAATACTGTTCAAAACGTCTCCAAGGCA...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTTATCACAACTGCCTCTaGGGACTTGTGTTCAAAAAG +
Preference number: 5 (lower is better)
Translates to: ESCSLSRKQDGGASPELLYHNCL*GLVFKK
Trigger: CTTTTTGAACACAAGTCCCAAGAGGCAGTTGTGATA...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp GGTAGGGGCAGGTGGCCGGGCAAGCTTTTCCACTTTCAGAGGACTGTCTTGTGGATACACCAATTTGCATaGTTTCATTTACAGACAGCG +
Preference number: 5 (lower is better)
Translates to: GRGRWPGKLFHFQRTVLWIHQFA*FHLQTA
Trigger: CGCTGTCTGTAAATGAAACAATGCAAATTGGTGTAT...CCACAAGACAGTCCTCTGAAAGTGGAAAAGCTTGCCCGGCCACCTGCCCCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCTTTTCTCCAAAGTCATaGTTTTTGGTTGGTCCTTGG +
Preference number: 5 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSFSPKS*FLVGPW
Trigger: CCAAGGACCAACCAAAAACAATGACTTTGGAGAAAA...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGACTCCCCATCCAACAGTaGACAGTTCACCAACCCAAT +
Preference number: 5 (lower is better)
Translates to: TRSQADVDTLLKQPAELRLPIQQ*TVHQPN
Trigger: ATTGGGTTGGTGAACTGTCAACTGTTGGATGGGGAG...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTATTTACTACTGTGCTTaGAGAGACAACTCACGTCCC +
Preference number: 5 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSIYYCA*RDNSRP
Trigger: GGGACGTGAGTTGTCTCTCAAAGCACAGTAGTAAAT...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS CCA 90 bp GTGGAACGGCATCTTTTCCCTGTGTGCGGAATTTATTCCTTCTGCTaGGTTGTTGGTCTCGCCGACTTTAAGAATAAAACCACGGACCTC +
Preference number: 5 (lower is better)
Translates to: VERHLFPVCGIYSFC*VVGLADFKNKTTDL
Trigger: GAGGTCCGTGGTTTTATTCTTAAAGTCGGCGAGACCAACAACCCAGCAGAAGGAATAAATTCCGCACACAGGGAAAAGATGCCGTTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395276.6
CDS-3UTR CAA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGAGGCTCTCTTCCTCATaGATAATGATGTTCTCAATG +
Preference number: 5 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKRLSSS*IMMFSM
Trigger: CATTGAGAACATCATTATCAATGAGGAAGAGAGCCT...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCACTCCGGAGTATCTGGTaGGCTGCAATCAGCATGACA +
Preference number: 5 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPLRSIW*AAISMT
Trigger: TGTCATGCTGATTGCAGCCAACCAGATACTCCGGAG...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGCCTGAAGTCAGCCTCTaGGAACTGAGGGTTGACCTC +
Preference number: 5 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGPEVSL*ELRVDL
Trigger: GAGGTCAACCCTCAGTTCCAAGAGGCTGACTTCAGG...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGCCTGAAGTCAGCCTCTaGGAACTGAGGGTTGACCTC +
Preference number: 5 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPPEVSL*ELRVDL
Trigger: GAGGTCAACCCTCAGTTCCAAGAGGCTGACTTCAGG...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTCTGAAAATGAGTCAGTaGCAGAATCTGAAGGCCAGA +
Preference number: 5 (lower is better)
Translates to: KAGTAQHSASLISHLKGCLKMSQ*QNLKAR
Trigger: TCTGGCCTTCAGATTCTGCAACTGACTCATTTTCAG...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGCAGGTTGCTGCCTCCTaGGTCTGGCCTTGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: NIHQFALFHLQTADTKREQVAAS*VWPCWA
Trigger: AGCCCAGCAAGGCCAGACCAAGGAGGCAGCAACCTG...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGATGGAGGAGGGGGCTTaGAAGAATCATCCCTGGGGT +
Preference number: 5 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPMEEGA*KNHPWG
Trigger: ACCCCAGGGATGATTCTTCAAAGCCCCCTCCTCCAT...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTAAGGAAAATGCCTTCTaGCTCATCACTTGTGCTTTC +
Preference number: 5 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSKENAF*LITCAF
Trigger: GAAAGCACAAGTGATGAGCAAGAAGGCATTTTCCTT...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGAAATGTTCCCTATTTTaGTGTGCCTTGGCAAACTCA +
Preference number: 5 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKKCSLF*CALANS
Trigger: TGAGTTTGCCAAGGCACACAAAAATAGGGAACATTT...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTAAATGTTCCCTATTTTaGTGTGCCTTGGCAAACTCA +
Preference number: 5 (lower is better)
Translates to: ESCSLSRKQDGGASPELLKCSLF*CALANS
Trigger: TGAGTTTGCCAAGGCACACAAAAATAGGGAACATTT...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGGATGTTCTTCAGGGGTaGCAGCTCTGCAGACCTCCT +
Preference number: 5 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPDVLQG*QLCRPP
Trigger: AGGAGGTCTGCAGAGCTGCAACCCCTGAAGAACATC...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAGCGAGAAACACTAGTTaGAAAGCCAACCCATCACAC +
Preference number: 5 (lower is better)
Translates to: TRSQADVDTLLKQPAELRARNTS*KANPSH
Trigger: GTGTGATGGGTTGGCTTTCAAACTAGTGTTTCTCGC...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTAGTACCGTCCACACTTaGAGTTCTTTCTTCTGCTCT +
Preference number: 5 (lower is better)
Translates to: KAGTAQHSASLISHLKGCSTVHT*SSFFCS
Trigger: AGAGCAGAAGAAAGAACTCAAAGTGTGGACGGTACT...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTTATCACAACTGCCTCTaGGGACTTGTGTTCAAAAAG +
Preference number: 5 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSYHNCL*GLVFKK
Trigger: CTTTTTGAACACAAGTCCCAAGAGGCAGTTGTGATA...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp TCTCTCTTGCTCCTGTTCTTGCTGTGTGACGTGCCTGCTCCCCCTTCACCTTCCATACACCAATTTGCATaGTTTCATTTACAGACAGCG +
Preference number: 5 (lower is better)
Translates to: SLLLLFLLCDVPAPPSPSIHQFA*FHLQTA
Trigger: CGCTGTCTGTAAATGAAACAATGCAAATTGGTGTAT...GGAAGGTGAAGGGGGAGCAGGCACGTCACACAGCAAGAACAGGAGCAAGAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTAATAAACAAAACCTCTaGCCTGCAAGCTGTGACACA +
Preference number: 5 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSNKQNL*PASCDT
Trigger: TGTGTCACAGCTTGCAGGCAAGAGGTTTTGTTTATT...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGTTGAGAGCCACTGGCTaGTGCAACTCTCCACCAGGA +
Preference number: 5 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPLRATG*CNSPPG
Trigger: TCCTGGTGGAGAGTTGCACAAGCCAGTGGCTCTCAA...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCATTTCCTTGGAGAGAGTaGAGAGCCACTGGCTTGTGC +
Preference number: 5 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPFPWRE*RATGLC
Trigger: GCACAAGCCAGTGGCTCTCAACTCTCTCCAAGGAAA...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp GAATCCTGCAGCCTTTCCAGAAAACAGGATGGCGGCGCCTCTCCAGAACTCCTTTTTTCTCCAAAGTCATaGTTTTTGGTTGGTCCTTGG +
Preference number: 5 (lower is better)
Translates to: ESCSLSRKQDGGASPELLFSPKS*FLVGPW
Trigger: CCAAGGACCAACCAAAAACAATGACTTTGGAGAAAA...AAGGAGTTCTGGAGAGGCGCCGCCATCCTGTTTTCTGGAAAGGCTGCAGGATTC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS GCA 90 bp ATGGTGGAACGGCATCTTTTCCCTGTGTGCGGAATTTATTCCTTCTaGTGGGTTGTTGGTCTCGCCGACTTTAAGAATAAAACCACGGAC +
Preference number: 5 (lower is better)
Translates to: MVERHLFPVCGIYSF*WVVGLADFKNKTTD
Trigger: GTCCGTGGTTTTATTCTTAAAGTCGGCGAGACCAACAACCCAGCAGAAGGAATAAATTCCGCACACAGGGAAAAGATGCCGTTCCACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395276.6
CDS-3UTR CAA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCATCTGAAGACACCAGTTaGGGGCCAAGAATGGTCATG +
Preference number: 5 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPSEDTS*GPRMVM
Trigger: CATGACCATTCTTGGCCCCAAACTGGTGTCTTCAGA...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
CDS-3UTR CAA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCATCTAACCCTCACCTCTaGAAGGGTCTCTGTTCTCCA +
Preference number: 5 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPSNPHL*KGLCSP
Trigger: TGGAGAACAGAGACCCTTCAAGAGGTGAGGGTTAGA...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGTTCACGTGTTTGGCTaGCAGGAGTGTGCTCAACAG +
Preference number: 5 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGVHVFG*QECAQQ
Trigger: CTGTTGAGCACACTCCTGCAAGCCAAACACGTGAAC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGATCTATGAATGGGAAGTaGGGAGGGGCATTATTGTCA +
Preference number: 5 (lower is better)
Translates to: TRSQADVDTLLKQPAELRSMNGK*GGALLS
Trigger: TGACAATAATGCCCCTCCCAACTTCCCATTCATAGA...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAAGCTGTCCTGGGTGGTaGCATCCTTCATTTTCTGTC +
Preference number: 5 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPSCPGW*HPSFSV
Trigger: GACAGAAAATGAAGGATGCAACCACCCAGGACAGCT...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGGAGCAATATCGCAGTaGCACCTTGCATTCCCTGGA +
Preference number: 5 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGGAISQ*HLAFPG
Trigger: TCCAGGGAATGCAAGGTGCAACTGCGATATTGCTCC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGGGAGCAATATCGCAGTaGCACCTTGCATTCCCTGGA +
Preference number: 5 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPGAISQ*HLAFPG
Trigger: TCCAGGGAATGCAAGGTGCAACTGCGATATTGCTCC...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAAGTACCGTCCACACTTaGAGTTCTTTCTTCTGCTCT +
Preference number: 5 (lower is better)
Translates to: TRSQADVDTLLKQPAELRSTVHT*SSFFCS
Trigger: AGAGCAGAAGAAAGAACTCAAAGTGTGGACGGTACT...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CATCGTCCGCATCCATCCATAGTCCATAGGTCCGTGTCTGCTGTGTGGAGGAAGATACACCAATTTGCATaGTTTCATTTACAGACAGCG +
Preference number: 5 (lower is better)
Translates to: HRPHPSIVHRSVSAVWRKIHQFA*FHLQTA
Trigger: CGCTGTCTGTAAATGAAACAATGCAAATTGGTGTAT...CTTCCTCCACACAGCAGACACGGACCTATGGACTATGGATGGATGCGGACGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGCCTTTATTTTCACACTaGCCAAGACAGACAGAAAGC +
Preference number: 5 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEPLFSH*PRQTES
Trigger: GCTTTCTGTCTGTCTTGGCAAGTGTGAAAATAAAGG...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp GATCAGACTGATGGGCAGCCCCATGGCACTCAATGGCCTGCATGTTTCCAAAGTGGAGAACAACAGGGCTaGTTAGAAAAACAATTACTG +
Preference number: 5 (lower is better)
Translates to: DQTDGQPHGTQWPACFQSGEQQG*LEKQLL
Trigger: CAGTAATTGTTTTTCTAACAAGCCCTGTTGTTCTCC...ACTTTGGAAACATGCAGGCCATTGAGTGCCATGGGGCTGCCCATCAGTCTGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGTTTCCTTGGAGAGAGTaGAGAGCCACTGGCTTGTGC +
Preference number: 5 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGFPWRE*RATGLC
Trigger: GCACAAGCCAGTGGCTCTCAACTCTCTCCAAGGAAA...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGAATTTACTACTGTGCTTaGAGAGACAACTCACGTCCC +
Preference number: 5 (lower is better)
Translates to: TRSQADVDTLLKQPAELRIYYCA*RDNSRP
Trigger: GGGACGTGAGTTGTCTCTCAAAGCACAGTAGTAAAT...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTAGACTTGGAATGGTGTaGAAAACAGATCCTTGGATT +
Preference number: 5 (lower is better)
Translates to: KAGTAQHSASLISHLKGCRLGMV*KTDPWI
Trigger: AATCCAAGGATCTGTTTTCAACACCATTCCAAGTCT...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGAGACTTGGAATGGTGTaGAAAACAGATCCTTGGATT +
Preference number: 5 (lower is better)
Translates to: QWPACFQSRPAIQRRPSERLGMV*KTDPWI
Trigger: AATCCAAGGATCTGTTTTCAACACCATTCCAAGTCT...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGTGGAGGCTTAATATCTaGTTTGCCTTCCAAGATGAT +
Preference number: 5 (lower is better)
Translates to: QWPACFQSRPAIQRRPSEWRLNI*FAFQDD
Trigger: ATCATCTTGGAAGGCAAACAAGATATTAAGCCTCCA...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGCCCCCAAATTTCATGTaGATCTCCAGTGCTGGAGGT +
Preference number: 5 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPPPNFM*ISSAGG
Trigger: ACCTCCAGCACTGGAGATCAACATGAAATTTGGGGG...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTGGAGAACAACAGGGCTaGTTAGAAAAACAATTACTG +
Preference number: 5 (lower is better)
Translates to: KAGTAQHSASLISHLKGCGEQQG*LEKQLL
Trigger: CAGTAATTGTTTTTCTAACAAGCCCTGTTGTTCTCC...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CAATGGCCTGCATGTTTCCAAAGTAGGCCAGCGATCCAGAGAAGACCTTCAGAGAGTCATTGTTTTTGGTaGGTCCTTGGAGAAAAAGCT +
Preference number: 5 (lower is better)
Translates to: QWPACFQSRPAIQRRPSESHCFW*VLGEKA
Trigger: AGCTTTTTCTCCAAGGACCAACCAAAAACAATGACT...CTCTGAAGGTCTTCTCTGGATCGCTGGCCTACTTTGGAAACATGCAGGCCATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp AAAGCAGGCACCGCTCAGCACTCAGCATCCCTCATTAGCCATTTAAAGGGCTGTCCAAAGTCATTGTTTTaGGTTGGTCCTTGGAGAAAA +
Preference number: 5 (lower is better)
Translates to: KAGTAQHSASLISHLKGCPKSLF*VGPWRK
Trigger: TTTTCTCCAAGGACCAACCAAAAACAATGACTTTGG...ACAGCCCTTTAAATGGCTAATGAGGGATGCTGAGTGCTGAGCGGTGCCTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGCTCCCCATCCAACAGTaGACAGTTCACCAACCCAAT +
Preference number: 5 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPLPIQQ*TVHQPN
Trigger: ATTGGGTTGGTGAACTGTCAACTGTTGGATGGGGAG...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGCAGTTGCACTCAACCTaGGGTTCTTTACTGAACGGT +
Preference number: 5 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPQLHST*GSLLNG
Trigger: ACCGTTCAGTAAAGAACCCAAGGTTGAGTGCAACTG...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp ACCAGAAGCCAAGCAGATGTTGATACCTTGCTCAAACAGCCTGCAGAACTGCGATGGAGGCTTAATATCTaGTTTGCCTTCCAAGATGAT +
Preference number: 5 (lower is better)
Translates to: TRSQADVDTLLKQPAELRWRLNI*FAFQDD
Trigger: ATCATCTTGGAAGGCAAACAAGATATTAAGCCTCCA...TCGCAGTTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGCTTGGCTTCTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGCTGAAACCACTGGGTTaGCCTAAGACCACACCTAAA +
Preference number: 5 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPLKPLG*PKTTPK
Trigger: TTTAGGTGTGGTCTTAGGCAAACCCAGTGGTTTCAG...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGTTGGGAGGGGCATTATaGTCAAAAGCAGCTGTCCAT +
Preference number: 5 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPLGGAL*SKAAVH
Trigger: ATGGACAGCTGCTTTTGACAATAATGCCCCTCCCAA...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGTTTCAGAGGACTGTCTaGTGGGTGGGACTGGAAAAA +
Preference number: 5 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPFQRTV*WVGLEK
Trigger: TTTTTCCAGTCCCACCCACAAGACAGTCCTCTGAAA...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGTATCGCAGTTGCACCTaGCATTCCCTGGAATATTCC +
Preference number: 5 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPYRSCT*HSLEYS
Trigger: GGAATATTCCAGGGAATGCAAGGTGCAACTGCGATA...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS TCA 90 bp GAATATGCTGTCTATCGTGTTCCCAAGAAAACCATCGCGACCTTCTaGAGACACCAGTTTGGGGCCAAGAATGGTCATGAATTCATCAAA +
Preference number: 5 (lower is better)
Translates to: EYAVYRVPKKTIATF*RHQFGAKNGHEFIK
Trigger: TTTGATGAATTCATGACCATTCTTGGCCCCAAACTGGTGTCTTCAGAAGGTCGCGATGGTTTTCTTGGGAACACGATAGACAGCATATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000431984.5
ENST00000446128.1
CDS-3UTR CAA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGCTCCGGAGTATCTGGTaGGCTGCAATCAGCATGACA +
Preference number: 5 (lower is better)
Translates to: NIHQFALFHLQTADTKRELRSIW*AAISMT
Trigger: TGTCATGCTGATTGCAGCCAACCAGATACTCCGGAG...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGCTGTTGACCCTTGGGTaGAAAGAATGGGGAGTGGAG +
Preference number: 5 (lower is better)
Translates to: NIHQFALFHLQTADTKRELLTLG*KEWGVE
Trigger: CTCCACTCCCCATTCTTTCAACCCAAGGGTCAACAG...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGCTGAAAATGAGTCAGTaGCAGAATCTGAAGGCCAGA +
Preference number: 5 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPLKMSQ*QNLKAR
Trigger: TCTGGCCTTCAGATTCTGCAACTGACTCATTTTCAG...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGGTTCACGTGTTTGGCTaGCAGGAGTGTGCTCAACAG +
Preference number: 5 (lower is better)
Translates to: NIHQFALFHLQTADTKREVHVFG*QECAQQ
Trigger: CTGTTGAGCACACTCCTGCAAGCCAAACACGTGAAC...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGCCAAAGTTCACGTGTTaGGCTTGCAGGAGTGTGCTC +
Preference number: 5 (lower is better)
Translates to: NIHQFALFHLQTADTKREPKFTC*ACRSVL
Trigger: GAGCACACTCCTGCAAGCCAAACACGTGAACTTTGG...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGATTTACTACTGTGCTTaGAGAGACAACTCACGTCCC +
Preference number: 5 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGIYYCA*RDNSRP
Trigger: GGGACGTGAGTTGTCTCTCAAAGCACAGTAGTAAAT...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCAAATAAAGACCTGAGCTaGGAAAAGTACAAAGGGAAC +
Preference number: 5 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPNKDLS*EKYKGN
Trigger: GTTCCCTTTGTACTTTTCCAAGCTCAGGTCTTTATT...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGAAGGAAAATGCCTTCTaGCTCATCACTTGTGCTTTC +
Preference number: 5 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPKENAF*LITCAF
Trigger: GAAAGCACAAGTGATGAGCAAGAAGGCATTTTCCTT...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp TTGATGAGTTCCGTCTTAGTGGCTTATTCTGGATATGAGAGCTGCCAAGCTCCATGGAGGCTTAATATCTaGTTTGCCTTCCAAGATGAT +
Preference number: 5 (lower is better)
Translates to: LMSSVLVAYSGYESCQAPWRLNI*FAFQDD
Trigger: ATCATCTTGGAAGGCAAACAAGATATTAAGCCTCCA...TGGAGCTTGGCAGCTCTCATATCCAGAATAAGCCACTAAGACGGAACTCATCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGCGTGCAAAACTGTCTTaGATTTATGACCTGAGTCTG +
Preference number: 5 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGRAKLS*IYDLSL
Trigger: CAGACTCAGGTCATAAATCAAAGACAGTTTTGCACG...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGAGCTGTCCTGGGTGGTaGCATCCTTCATTTTCTGTC +
Preference number: 5 (lower is better)
Translates to: NIHQFALFHLQTADTKRESCPGW*HPSFSV
Trigger: GACAGAAAATGAAGGATGCAACCACCCAGGACAGCT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGTGCCTTGGAGACGTTTaGAACAGTATTGTCATGTCT +
Preference number: 5 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPCLGDV*NSIVMS
Trigger: AGACATGACAATACTGTTCAAAACGTCTCCAAGGCA...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGAATAAACAAAACCTCTaGCCTGCAAGCTGTGACACA +
Preference number: 5 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPNKQNL*PASCDT
Trigger: TGTGTCACAGCTTGCAGGCAAGAGGTTTTGTTTATT...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGCCTTTATTTTCACACTaGCCAAGACAGACAGAAAGC +
Preference number: 5 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPPLFSH*PRQTES
Trigger: GCTTTCTGTCTGTCTTGGCAAGTGTGAAAATAAAGG...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGGTTTTTGGTTGGTCCTaGGAGAAAAAGCTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPVFGWS*EKKLLP
Trigger: AGGAAGAAGCTTTTTCTCCAAGGACCAACCAAAAAC...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGTTTTTGGTTGGTCCTaGGAGAAAAAGCTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGVFGWS*EKKLLP
Trigger: AGGAAGAAGCTTTTTCTCCAAGGACCAACCAAAAAC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGATTCCTTCTGCTGGGTaGTTGGTCTCGCCGACTTTA +
Preference number: 5 (lower is better)
Translates to: NIHQFALFHLQTADTKREIPSAG*LVSPTL
Trigger: TAAAGTCGGCGAGACCAACAACCCAGCAGAAGGAAT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395275.7
ENST00000395276.6
CDS-3UTR CAA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGAGGCTCTCTTCCTCATaGATAATGATGTTCTCAATG +
Preference number: 5 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGRLSSS*IMMFSM
Trigger: CATTGAGAACATCATTATCAATGAGGAAGAGAGCCT...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGTTGGGAGGGGCATTATaGTCAAAAGCAGCTGTCCAT +
Preference number: 5 (lower is better)
Translates to: NIHQFALFHLQTADTKRELGGAL*SKAAVH
Trigger: ATGGACAGCTGCTTTTGACAATAATGCCCCTCCCAA...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGGCAGATGTTGATACCTaGCTCAAACAGCCTGCAGAA +
Preference number: 5 (lower is better)
Translates to: NIHQFALFHLQTADTKREADVDT*LKQPAE
Trigger: TTCTGCAGGCTGTTTGAGCAAGGTATCAACATCTGC...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGGCGAGAAACACTAGTTaGAAAGCCAACCCATCACAC +
Preference number: 5 (lower is better)
Translates to: NIHQFALFHLQTADTKREARNTS*KANPSH
Trigger: GTGTGATGGGTTGGCTTTCAAACTAGTGTTTCTCGC...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGGGAGAACAACAGGGCTaGTTAGAAAAACAATTACTG +
Preference number: 5 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGGEQQG*LEKQLL
Trigger: CAGTAATTGTTTTTCTAACAAGCCCTGTTGTTCTCC...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGAGTCATTGTTTTTGGTaGGTCCTTGGAGAAAAAGCT +
Preference number: 5 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGSHCFW*VLGEKA
Trigger: AGCTTTTTCTCCAAGGACCAACCAAAAACAATGACT...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CAGGGCTTGTTAGAAAAACAATTACTGGGACGTCAGTCTACTTTAGGAAGAGGGCCAAAGTCATTGTTTTaGGTTGGTCCTTGGAGAAAA +
Preference number: 5 (lower is better)
Translates to: QGLLEKQLLGRQSTLGRGPKSLF*VGPWRK
Trigger: TTTTCTCCAAGGACCAACCAAAAACAATGACTTTGG...CCCTCTTCCTAAAGTAGACTGACGTCCCAGTAATTGTTTTTCTAACAAGCCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp CAAGGTAAGGGAAAGGTAAGATGCACAAGGACCTTAACTTACAAAGGTCATCCGTTTTCTCCAAAGTCATaGTTTTTGGTTGGTCCTTGG +
Preference number: 5 (lower is better)
Translates to: QGKGKVRCTRTLTYKGHPFSPKS*FLVGPW
Trigger: CCAAGGACCAACCAAAAACAATGACTTTGGAGAAAA...CGGATGACCTTTGTAAGTTAAGGTCCTTGTGCATCTTACCTTTCCCTTACCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGTGCCTTGGAGACGTTTaGAACAGTATTGTCATGTCT +
Preference number: 5 (lower is better)
Translates to: NIHQFALFHLQTADTKRECLGDV*NSIVMS
Trigger: AGACATGACAATACTGTTCAAAACGTCTCCAAGGCA...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGAATAAACAAAACCTCTaGCCTGCAAGCTGTGACACA +
Preference number: 5 (lower is better)
Translates to: NIHQFALFHLQTADTKRENKQNL*PASCDT
Trigger: TGTGTCACAGCTTGCAGGCAAGAGGTTTTGTTTATT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGAGGCTCTCTTCCTCATaGATAATGATGTTCTCAATG +
Preference number: 5 (lower is better)
Translates to: NIHQFALFHLQTADTKRERLSSS*IMMFSM
Trigger: CATTGAGAACATCATTATCAATGAGGAAGAGAGCCT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGTTTTCTCCAAAGTCATaGTTTTTGGTTGGTCCTTGG +
Preference number: 5 (lower is better)
Translates to: NIHQFALFHLQTADTKREFSPKS*FLVGPW
Trigger: CCAAGGACCAACCAAAAACAATGACTTTGGAGAAAA...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS-3UTR CAA 90 bp AACATACACCAATTTGCATTGTTTCATTTACAGACAGCGGACACCAAAAGAGAGATACACCAATTTGCATaGTTTCATTTACAGACAGCG +
Preference number: 5 (lower is better)
Translates to: NIHQFALFHLQTADTKREIHQFA*FHLQTA
Trigger: CGCTGTCTGTAAATGAAACAATGCAAATTGGTGTAT...CTCTCTTTTGGTGTCCGCTGTCTGTAAATGAAACAATGCAAATTGGTGTATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS GCA 72 bp TCCGAGGCCCGCAGGGAGGGGGCGGTGCGGAATGGATaGGCCGAGCGGGCAGCGCTCAGCCTCTCGCTCACA +
Preference number: 6 (lower is better)
Translates to: SEARREGAVRNG*AERAALSLSLT
Trigger: TGTGAGCGAGAGGCTGAGCGCTGCCCGCTCGGCGCATCCATTCCGCACCGCCCCCTCCCTGCGGGCCTCGGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329008.9
CDS CCA 72 bp TTCCTCCGAGGCCCGCAGGGAGGGGGCGGTGCGGAATaGATGCGCCGAGCGGGCAGCGCTCAGCCTCTCGCT +
Preference number: 6 (lower is better)
Translates to: FLRGPQGGGGAE*MRRAGSAQPLA
Trigger: AGCGAGAGGCTGAGCGCTGCCCGCTCGGCGCATCCATTCCGCACCGCCCCCTCCCTGCGGGCCTCGGAGGAA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329008.9
CDS GCA 72 bp GAGTCTGCCCGCACGGCATGCACATGCGCGGTGAGCTaGAACACAGTGTGGCTGGCGGGAGGCTGCTACTCC +
Preference number: 6 (lower is better)
Translates to: ESARTACTCAVS*NTVWLAGGCYS
Trigger: GGAGTAGCAGCCTCCCGCCAGCCACACTGTGTTGCAGCTCACCGCGCATGTGCATGCCGTGCGGGCAGACTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS CCA 72 bp ACGGCATGCACATGCGCGGTGAGCTGCAACACAGTGTaGCTGGCGGGAGGCTGCTACTCCATGCCGCTCCGG +
Preference number: 6 (lower is better)
Translates to: TACTCAVSCNTV*LAGGCYSMPLR
Trigger: CCGGAGCGGCATGGAGTAGCAGCCTCCCGCCAGCCACACTGTGTTGCAGCTCACCGCGCATGTGCATGCCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS TCA 72 bp AGGAAGAGTCTGCCCGCACGGCATGCACATGCGCGGTaGGCTGCAACACAGTGTGGCTGGCGGGAGGCTGCT +
Preference number: 6 (lower is better)
Translates to: RKSLPARHAHAR*AATQCGWREAA
Trigger: AGCAGCCTCCCGCCAGCCACACTGTGTTGCAGCTCACCGCGCATGTGCATGCCGTGCGGGCAGACTCTTCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS CAA 72 bp CCGGAGTCGTCTGCTCCTCCCGGTGGGCTTGCGGTCTaGCTGACTTCAAGAACGAAGACGCAGACCGCGGCC +
Preference number: 6 (lower is better)
Translates to: PESSAPPGGLAV*LTSRTKTQTAA
Trigger: GGCCGCGGTCTGCGTCTTCGTTCTTGAAGTCAGCAAGACCGCAAGCCCACCGGGAGGAGCAGACGACTCCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395275.7
ENST00000395276.6
CDS GCA 72 bp GCGGTGAGCTGCAACACAGTGTGGCTGGCGGGAGGCTaGTACTCCATGCCGCTCCGGAGTATCTGGTTGGCT +
Preference number: 6 (lower is better)
Translates to: AVSCNTVWLAGG*YSMPLRSIWLA
Trigger: AGCCAACCAGATACTCCGGAGCGGCATGGAGTAGCAGCCTCCCGCCAGCCACACTGTGTTGCAGCTCACCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS GCA 72 bp GGCGCGTCCGGAGTCGTCTGCTCCTCCCGGTGGGCTTaGGGTCTTGCTGACTTCAAGAACGAAGACGCAGAC +
Preference number: 6 (lower is better)
Translates to: GASGVVCSSRWA*GLADFKNEDAD
Trigger: GTCTGCGTCTTCGTTCTTGAAGTCAGCAAGACCGCAAGCCCACCGGGAGGAGCAGACGACTCCGGACGCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395275.7
ENST00000395276.6
CDS CAA 90 bp ATGGCGCGTCCGGAGTCGTCTGCTCCTCCCGGTGGGCTTGCGGTCTaGCTGACTTCAAGAACGAAGACGCAGACCGCGGCCGTGAGCTTT +
Preference number: 6 (lower is better)
Translates to: MARPESSAPPGGLAV*LTSRTKTQTAAVSF
Trigger: AAAGCTCACGGCCGCGGTCTGCGTCTTCGTTCTTGAAGTCAGCAAGACCGCAAGCCCACCGGGAGGAGCAGACGACTCCGGACGCGCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395275.7
ENST00000395276.6
CDS CCA 72 bp TTTCTCATTCTCGGGCTTCCCCTCTCCGGGTTGCTCTaGCAGCCGCATCGGGGGTCCAGGGCGATGTTCTCA +
Preference number: 6 (lower is better)
Translates to: FLILGLPLSGLL*QPHRGSRAMFS
Trigger: TGAGAACATCGCCCTGGACCCCCGATGCGGCTGCCAGAGCAACCCGGAGAGGGGAAGCCCGAGAATGAGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395275.7
CDS GCA 72 bp GCAACACAGTGTGGCTGGCGGGAGGCTGCTACTCCATaGCGCTCCGGAGTATCTGGTTGGCTGCAATCAGCA +
Preference number: 6 (lower is better)
Translates to: ATQCGWREAATP*RSGVSGWLQSA
Trigger: TGCTGATTGCAGCCAACCAGATACTCCGGAGCGGCATGGAGTAGCAGCCTCCCGCCAGCCACACTGTGTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
CDS GCA 72 bp GTTACAGCTCTTAAAGATGGCGCGTCCGGAGTCGTCTaGTCCTCCCGGTGGGCTTGCGGTCTTGCTGACTTC +
Preference number: 6 (lower is better)
Translates to: VTALKDGASGVV*SSRWACGLADF
Trigger: GAAGTCAGCAAGACCGCAAGCCCACCGGGAGGAGCAGACGACTCCGGACGCGCCATCTTTAAGAGCTGTAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395275.7
ENST00000395276.6
CDS CCA 72 bp AAAGATGGCGCGTCCGGAGTCGTCTGCTCCTCCCGGTaGGCTTGCGGTCTTGCTGACTTCAAGAACGAAGAC +
Preference number: 6 (lower is better)
Translates to: KDGASGVVCSSR*ACGLADFKNED
Trigger: GTCTTCGTTCTTGAAGTCAGCAAGACCGCAAGCCCACCGGGAGGAGCAGACGACTCCGGACGCGCCATCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395275.7
ENST00000395276.6
CDS TCA 72 bp GCTGTTCGCTGTCACTGCCAGCAGAGAGCGATCGGTTaGGGTAATTCCCCTTGTACAACAAGCCGGCGGTCA +
Preference number: 6 (lower is better)
Translates to: AVRCHCQQRAIG*GNSPCTTSRRS
Trigger: TGACCGCCGGCTTGTTGTACAAGGGGAATTACCTCAACCGATCGCTCTCTGCTGGCAGTGACAGCGAACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000431984.5
ENST00000446128.1
CDS GCA 72 bp CATATGAGGCTCTTCCGGACGCAGGTCTGTCTGTTCTaGTTCTGGGAATGCACTCCTTCAAACTCTGTTTGG +
Preference number: 6 (lower is better)
Translates to: HMRLFRTQVCLF*FWECTPSNSVW
Trigger: CCAAACAGAGTTTGAAGGAGTGCATTCCCAGAAGCAGAACAGACAGACCTGCGTCCGGAAGAGCCTCATATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
ENST00000431984.5
CDS CCA 72 bp TTCTGCTTCTGGGAATGCACTCCTTCAAACTCTGTTTaGCAGTTCCCCGAGGTCTCATTCAGGCTCTCTTCC +
Preference number: 6 (lower is better)
Translates to: FCFWECTPSNSV*QFPEVSFRLSS
Trigger: GGAAGAGAGCCTGAATGAGACCTCGGGGAACTGCCAAACAGAGTTTGAAGGAGTGCATTCCCAGAAGCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
ENST00000431984.5
CDS CAA 72 bp GTTCTGCTTCTGGGAATGCACTCCTTCAAACTCTGTTaGGCAGTTCCCCGAGGTCTCATTCAGGCTCTCTTC +
Preference number: 6 (lower is better)
Translates to: VLLLGMHSFKLC*AVPRGLIQALF
Trigger: GAAGAGAGCCTGAATGAGACCTCGGGGAACTGCCAAACAGAGTTTGAAGGAGTGCATTCCCAGAAGCAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000405452.3
ENST00000431984.5
CDS TCA 72 bp GTCTATCGTGTTCCCAAGAAAACCATCGCGACCTTCTaGAGACACCAGTTTGGGGCCAAGAATGGTCATGAA +
Preference number: 6 (lower is better)
Translates to: VYRVPKKTIATF*RHQFGAKNGHE
Trigger: TTCATGACCATTCTTGGCCCCAAACTGGTGTCTTCAGAAGGTCGCGATGGTTTTCTTGGGAACACGATAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000431984.5
ENST00000446128.1
CDS CAA 72 bp ATAGAGAATGTGCTTCAACTCTTCCAGAGTTATCCTTaGCATGTCAAACTGCCAGAATATGCTGTCTATCGT +
Preference number: 6 (lower is better)
Translates to: IENVLQLFQSYP*HVKLPEYAVYR
Trigger: ACGATAGACAGCATATTCTGGCAGTTTGACATGCAAAGGATAACTCTGGAAGAGTTGAAGCACATTCTCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329008.9
ENST00000395275.7
ENST00000395276.6
ENST00000431984.5