RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C7ORF26 (Homo sapiens)

Ensembl gene IDs: ENSG00000146576

Ensembl transcript IDs: ENST00000344417.10, ENST00000359073.9, ENST00000440409.1, ENST00000445375.5, ENST00000472693.1, ENST00000477298.1

Found 248 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAGCAGTGGCAGAGCCAGGACCCCACAGGCGAGGATGCGTGGGAGTaGGCTCTGCACGGGGCCTGTGGCCCACGGAGCTCCGGCCGTAGC +
Preference number: 1 (lower is better)
Translates to: KQWQSQDPTGEDAWE*ALHGACGPRSSGRS
Trigger: GCTACGGCCGGAGCTCCGTGGGCCACAGGCCCCGTGCAGAGCCCACTCCCACGCATCCTCGCCTGTGGGGTCCTGGCTCTGCCACTGCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445375.5
3UTR CCA 90 bp ACGGAGAAGCAGTGGCAGAGCCAGGACCCCACAGGCGAGGATGCGTaGGAGTGGGCTCTGCACGGGGCCTGTGGCCCACGGAGCTCCGGC +
Preference number: 1 (lower is better)
Translates to: TEKQWQSQDPTGEDA*EWALHGACGPRSSG
Trigger: GCCGGAGCTCCGTGGGCCACAGGCCCCGTGCAGAGCCCACTCCCACGCATCCTCGCCTGTGGGGTCCTGGCTCTGCCACTGCTTCTCCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445375.5
3UTR CCA 90 bp GGCACGGACCACCCGGGGGTCCAGGCGGTGGACACGGAGAAGCAGTaGCAGAGCCAGGACCCCACAGGCGAGGATGCGTGGGAGTGGGCT +
Preference number: 1 (lower is better)
Translates to: GTDHPGVQAVDTEKQ*QSQDPTGEDAWEWA
Trigger: AGCCCACTCCCACGCATCCTCGCCTGTGGGGTCCTGGCTCTGCCACTGCTTCTCCGTGTCCACCGCCTGGACCCCCGGGTGGTCCGTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445375.5
3UTR GCA 90 bp GGACACGGAGAAGCAGTGGCAGAGCCAGGACCCCACAGGCGAGGATaGGTGGGAGTGGGCTCTGCACGGGGCCTGTGGCCCACGGAGCTC +
Preference number: 1 (lower is better)
Translates to: GHGEAVAEPGPHRRG*VGVGSARGLWPTEL
Trigger: GAGCTCCGTGGGCCACAGGCCCCGTGCAGAGCCCACTCCCACGCATCCTCGCCTGTGGGGTCCTGGCTCTGCCACTGCTTCTCCGTGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445375.5
3UTR GCA 90 bp ACTCCCGGGCGCGCAGCCCACACAGGTGGCCTCCACGTCAGCCTCTaGGGCTCTCTGCTGCGCTGGGACACACAGAACAGCTGGCCACAG +
Preference number: 1 (lower is better)
Translates to: TPGRAAHTGGLHVSL*GSLLRWDTQNSWPQ
Trigger: CTGTGGCCAGCTGTTCTGTGTGTCCCAGCGCAGCAGAGAGCCGCAGAGGCTGACGTGGAGGCCACCTGTGTGGGCTGCGCGCCCGGGAGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445375.5
3UTR TCA 90 bp CTGCATGTCAAAGAATGCGACCGGGTGGGAAGCACCTGGACTCCGTaGCACCAAGACGGTTCTGCCGGCGGGGAGGGGCTGCCCGACCCC +
Preference number: 1 (lower is better)
Translates to: LHVKECDRVGSTWTP*HQDGSAGGEGLPDP
Trigger: GGGGTCGGGCAGCCCCTCCCCGCCGGCAGAACCGTCTTGGTGTCACGGAGTCCAGGTGCTTCCCACCCGGTCGCATTCTTTGACATGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
3UTR GCA 90 bp GGGGACACATCGTCTTCACGAGGAAAGAGGCCAGACACACGGGCTTaGACCCGTGGCTCCTGCCGTCACACTCCTCGCCACACAGGCTGT +
Preference number: 1 (lower is better)
Translates to: GDTSSSRGKRPDTRA*TRGSCRHTPRHTGC
Trigger: ACAGCCTGTGTGGCGAGGAGTGTGACGGCAGGAGCCACGGGTGCAAGCCCGTGTGTCTGGCCTCTTTCCTCGTGAAGACGATGTGTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
3UTR GCA 90 bp GCAGGCTCTCGGCAGAGGCTGGACTCTTCCCTCCACCATCCAATCTaGATGTCAAAGAATGCGACCGGGTGGGAAGCACCTGGACTCCGT +
Preference number: 1 (lower is better)
Translates to: AGSRQRLDSSLHHPI*MSKNATGWEAPGLR
Trigger: ACGGAGTCCAGGTGCTTCCCACCCGGTCGCATTCTTTGACATGCAGATTGGATGGTGGAGGGAAGAGTCCAGCCTCTGCCGAGAGCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
3UTR CCA 90 bp ATCGTCTTCACGAGGAAAGAGGCCAGACACACGGGCTTGCACCCGTaGCTCCTGCCGTCACACTCCTCGCCACACAGGCTGTGTCTGAAA +
Preference number: 1 (lower is better)
Translates to: IVFTRKEARHTGLHP*LLPSHSSPHRLCLK
Trigger: TTTCAGACACAGCCTGTGTGGCGAGGAGTGTGACGGCAGGAGCCACGGGTGCAAGCCCGTGTGTCTGGCCTCTTTCCTCGTGAAGACGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
3UTR CCA 90 bp TCTTCCCTCCACCATCCAATCTGCATGTCAAAGAATGCGACCGGGTaGGAAGCACCTGGACTCCGTGACACCAAGACGGTTCTGCCGGCG +
Preference number: 1 (lower is better)
Translates to: SSLHHPICMSKNATG*EAPGLRDTKTVLPA
Trigger: CGCCGGCAGAACCGTCTTGGTGTCACGGAGTCCAGGTGCTTCCCACCCGGTCGCATTCTTTGACATGCAGATTGGATGGTGGAGGGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
3UTR GCA 90 bp TGGCTCCTGCCGTCACACTCCTCGCCACACAGGCTGTGTCTGAAATaGGCAGAGAACAGAGGCTCCCAGGATCGGCATCTTTTAAAAATG +
Preference number: 1 (lower is better)
Translates to: WLLPSHSSPHRLCLK*AENRGSQDRHLLKM
Trigger: CATTTTTAAAAGATGCCGATCCTGGGAGCCTCTGTTCTCTGCGCATTTCAGACACAGCCTGTGTGGCGAGGAGTGTGACGGCAGGAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
3UTR-3UTR CCA 90 bp GCACGGACCACCCGGGGGTCCAGGCGGTGGACACGGAGAAGCAGTGGCAGAGCCTCTGCACGGGGCCTGTaGCCCACGGAGCTCCGGCCG +
Preference number: 2 (lower is better)
Translates to: ARTTRGSRRWTRRSSGRASARGL*PTELRP
Trigger: CGGCCGGAGCTCCGTGGGCCACAGGCCCCGTGCAGA...GGCTCTGCCACTGCTTCTCCGTGTCCACCGCCTGGACCCCCGGGTGGTCCGTGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445375.5
3UTR-3UTR CCA 90 bp CGTGGGAGTGGGCTCTGCACGGGGCCTGTGGCCCACGGAGCTCCGGCCGTAGCACGCAGCCCACACAGGTaGCCTCCACGTCAGCCTCTG +
Preference number: 2 (lower is better)
Translates to: RGSGLCTGPVAHGAPAVARSPHR*PPRQPL
Trigger: CAGAGGCTGACGTGGAGGCCACCTGTGTGGGCTGCG...TGCTACGGCCGGAGCTCCGTGGGCCACAGGCCCCGTGCAGAGCCCACTCCCACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445375.5
3UTR-3UTR GCA 90 bp CGGACCACCCGGGGGTCCAGGCGGTGGACACGGAGAAGCAGTGGCAGAGCCAGGCTCCACGTCAGCCTCTaGGGCTCTCTGCTGCGCTGG +
Preference number: 2 (lower is better)
Translates to: RTTRGSRRWTRRSSGRARLHVSL*GSLLRW
Trigger: CCAGCGCAGCAGAGAGCCGCAGAGGCTGACGTGGAG...CCTGGCTCTGCCACTGCTTCTCCGTGTCCACCGCCTGGACCCCCGGGTGGTCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445375.5
3UTR-3UTR CCA 90 bp GGCCGTAGCACTCCCGGGCGCGCAGCCCACACAGGTGGCCTCCACGTCAGCCTCGGCTCTCTGCTGCGCTaGGACACACAGAACAGCTGG +
Preference number: 2 (lower is better)
Translates to: GRSTPGRAAHTGGLHVSLGSLLR*DTQNSW
Trigger: CCAGCTGTTCTGTGTGTCCCAGCGCAGCAGAGAGCC...GAGGCTGACGTGGAGGCCACCTGTGTGGGCTGCGCGCCCGGGAGTGCTACGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445375.5
3UTR-3UTR GCA 90 bp AGGCGAGGATGCGTGGGAGTGGGCTCTGCACGGGGCCTGTGGCCCACGGAGCTCTCTGCGGCTCTCTGCTaGGCTGGGACACACAGAACA +
Preference number: 2 (lower is better)
Translates to: RRGCVGVGSARGLWPTELSAALC*AGTHRT
Trigger: TGTTCTGTGTGTCCCAGCGCAGCAGAGAGCCGCAGA...GAGCTCCGTGGGCCACAGGCCCCGTGCAGAGCCCACTCCCACGCATCCTCGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445375.5
3UTR-3UTR CCA 90 bp TGGGAAGCACCTGGACTCCGTGACACCAAGACGGTTCTGCCGGCGGGGAGGGGCCCCGAGGTTCTCTTCTaGGAGTCCGGCCACCCCTTC +
Preference number: 2 (lower is better)
Translates to: WEAPGLRDTKTVLPAGRGPEVLF*ESGHPF
Trigger: GAAGGGGTGGCCGGACTCCCAGAAGAGAACCTCGGG...GCCCCTCCCCGCCGGCAGAACCGTCTTGGTGTCACGGAGTCCAGGTGCTTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
3UTR-3UTR CCA 90 bp AGACACACGGGCTTGCACCCGTGGCTCCTGCCGTCACACTCCTCGCCACACAGGCCCGAGGTTCTCTTCTaGGAGTCCGGCCACCCCTTC +
Preference number: 2 (lower is better)
Translates to: RHTGLHPWLLPSHSSPHRPEVLF*ESGHPF
Trigger: GAAGGGGTGGCCGGACTCCCAGAAGAGAACCTCGGG...CCTGTGTGGCGAGGAGTGTGACGGCAGGAGCCACGGGTGCAAGCCCGTGTGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
3UTR CAA 90 bp CGGGGACACATCGTCTTCACGAGGAAAGAGGCCAGACACACGGGCTaGCACCCGTGGCTCCTGCCGTCACACTCCTCGCCACACAGGCTG +
Preference number: 2 (lower is better)
Translates to: RGHIVFTRKEARHTG*HPWLLPSHSSPHRL
Trigger: CAGCCTGTGTGGCGAGGAGTGTGACGGCAGGAGCCACGGGTGCAAGCCCGTGTGTCTGGCCTCTTTCCTCGTGAAGACGATGTGTCCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
3UTR-3UTR GCA 90 bp CACTCCTCGCCACACAGGCTGTGTCTGAAATGCGCAGAGAACAGAGGCTCCCAGACACCAAGACGGTTCTaGCGGCGGGGAGGGGCTGCC +
Preference number: 2 (lower is better)
Translates to: HSSPHRLCLKCAENRGSQTPRRF*RRGGAA
Trigger: GGCAGCCCCTCCCCGCCGGCAGAACCGTCTTGGTGT...CTGGGAGCCTCTGTTCTCTGCGCATTTCAGACACAGCCTGTGTGGCGAGGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
3UTR-3UTR GCA 90 bp AGCCCACTTTTTCTGGCGGGGACACATCGTCTTCACGAGGAAAGAGGCCAGACAACACCAAGACGGTTCTaGCGGCGGGGAGGGGCTGCC +
Preference number: 2 (lower is better)
Translates to: SPLFLAGTHRLHEERGQTTPRRF*RRGGAA
Trigger: GGCAGCCCCTCCCCGCCGGCAGAACCGTCTTGGTGT...TGTCTGGCCTCTTTCCTCGTGAAGACGATGTGTCCCCGCCAGAAAAAGTGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
3UTR-3UTR CCA 90 bp GGAGCCCACTTTTTCTGGCGGGGACACATCGTCTTCACGAGGAAAGAGGCCAGAACGGGCTTGCACCCGTaGCTCCTGCCGTCACACTCC +
Preference number: 2 (lower is better)
Translates to: GAHFFWRGHIVFTRKEARTGLHP*LLPSHS
Trigger: GGAGTGTGACGGCAGGAGCCACGGGTGCAAGCCCGT...TCTGGCCTCTTTCCTCGTGAAGACGATGTGTCCCCGCCAGAAAAAGTGGGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
3UTR-3UTR CCA 90 bp AGAAGGAGCCCACTTTTTCTGGCGGGGACACATCGTCTTCACGAGGAAAGAGGCACGGGCTTGCACCCGTaGCTCCTGCCGTCACACTCC +
Preference number: 2 (lower is better)
Translates to: RRSPLFLAGTHRLHEERGTGLHP*LLPSHS
Trigger: GGAGTGTGACGGCAGGAGCCACGGGTGCAAGCCCGT...GCCTCTTTCCTCGTGAAGACGATGTGTCCCCGCCAGAAAAAGTGGGCTCCTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
3UTR-3UTR TCA 90 bp ACACAGGCTGTGTCTGAAATGCGCAGAGAACAGAGGCTCCCAGGATCGGCATCTAGCACCTGGACTCCGTaGCACCAAGACGGTTCTGCC +
Preference number: 2 (lower is better)
Translates to: TQAVSEMRREQRLPGSASSTWTP*HQDGSA
Trigger: GGCAGAACCGTCTTGGTGTCACGGAGTCCAGGTGCT...AGATGCCGATCCTGGGAGCCTCTGTTCTCTGCGCATTTCAGACACAGCCTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
3UTR-3UTR GCA 90 bp AGAAGGAGCCCACTTTTTCTGGCGGGGACACATCGTCTTCACGAGGAAAGAGGCCTGCATGTCAAAGAATaGGACCGGGTGGGAAGCACC +
Preference number: 2 (lower is better)
Translates to: RRSPLFLAGTHRLHEERGLHVKE*DRVGST
Trigger: GGTGCTTCCCACCCGGTCGCATTCTTTGACATGCAG...GCCTCTTTCCTCGTGAAGACGATGTGTCCCCGCCAGAAAAAGTGGGCTCCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
3UTR-3UTR GCA 90 bp ACACAGGCTGTGTCTGAAATGCGCAGAGAACAGAGGCTCCCAGGATCGGCATCTCTGCATGTCAAAGAATaGGACCGGGTGGGAAGCACC +
Preference number: 2 (lower is better)
Translates to: TQAVSEMRREQRLPGSASLHVKE*DRVGST
Trigger: GGTGCTTCCCACCCGGTCGCATTCTTTGACATGCAG...AGATGCCGATCCTGGGAGCCTCTGTTCTCTGCGCATTTCAGACACAGCCTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
3UTR GCA 72 bp AGGACCCCACAGGCGAGGATGCGTGGGAGTGGGCTCTaGACGGGGCCTGTGGCCCACGGAGCTCCGGCCGTA +
Preference number: 3 (lower is better)
Translates to: RTPQARMRGSGL*TGPVAHGAPAV
Trigger: TACGGCCGGAGCTCCGTGGGCCACAGGCCCCGTGCAGAGCCCACTCCCACGCATCCTCGCCTGTGGGGTCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445375.5
3UTR CCA 72 bp CACCCGGGGGTCCAGGCGGTGGACACGGAGAAGCAGTaGCAGAGCCAGGACCCCACAGGCGAGGATGCGTGG +
Preference number: 3 (lower is better)
Translates to: HPGVQAVDTEKQ*QSQDPTGEDAW
Trigger: CCACGCATCCTCGCCTGTGGGGTCCTGGCTCTGCCACTGCTTCTCCGTGTCCACCGCCTGGACCCCCGGGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445375.5
3UTR TCA 72 bp AAAGAATGCGACCGGGTGGGAAGCACCTGGACTCCGTaGCACCAAGACGGTTCTGCCGGCGGGGAGGGGCTG +
Preference number: 3 (lower is better)
Translates to: KECDRVGSTWTP*HQDGSAGGEGL
Trigger: CAGCCCCTCCCCGCCGGCAGAACCGTCTTGGTGTCACGGAGTCCAGGTGCTTCCCACCCGGTCGCATTCTTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
3UTR GCA 72 bp CAGGTGGCCTCCACGTCAGCCTCTGCGGCTCTCTGCTaGGCTGGGACACACAGAACAGCTGGCCACAGTCTC +
Preference number: 3 (lower is better)
Translates to: QVASTSASAALC*AGTHRTAGHSL
Trigger: GAGACTGTGGCCAGCTGTTCTGTGTGTCCCAGCGCAGCAGAGAGCCGCAGAGGCTGACGTGGAGGCCACCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445375.5
3UTR GCA 72 bp TCGTCTTCACGAGGAAAGAGGCCAGACACACGGGCTTaGACCCGTGGCTCCTGCCGTCACACTCCTCGCCAC +
Preference number: 3 (lower is better)
Translates to: SSSRGKRPDTRA*TRGSCRHTPRH
Trigger: GTGGCGAGGAGTGTGACGGCAGGAGCCACGGGTGCAAGCCCGTGTGTCTGGCCTCTTTCCTCGTGAAGACGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
3UTR GCA 72 bp ACACAGGTGGCCTCCACGTCAGCCTCTGCGGCTCTCTaGTGCGCTGGGACACACAGAACAGCTGGCCACAGT +
Preference number: 3 (lower is better)
Translates to: TQVASTSASAAL*CAGTHRTAGHS
Trigger: ACTGTGGCCAGCTGTTCTGTGTGTCCCAGCGCAGCAGAGAGCCGCAGAGGCTGACGTGGAGGCCACCTGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445375.5
3UTR TCA 72 bp TCCTGCCGTCACACTCCTCGCCACACAGGCTGTGTCTaGAATGCGCAGAGAACAGAGGCTCCCAGGATCGGC +
Preference number: 3 (lower is better)
Translates to: SCRHTPRHTGCV*NAQRTEAPRIG
Trigger: GCCGATCCTGGGAGCCTCTGTTCTCTGCGCATTTCAGACACAGCCTGTGTGGCGAGGAGTGTGACGGCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
3UTR-3UTR CAA 90 bp CCCAATAAAACTGAGAAGTTCCTTTCCGAGGTGAGGGGAATTCCTGACAGCCTCGCCAGACACACGGGCTaGCACCCGTGGCTCCTGCCG +
Preference number: 3 (lower is better)
Translates to: PNKTEKFLSEVRGIPDSLARHTG*HPWLLP
Trigger: CGGCAGGAGCCACGGGTGCAAGCCCGTGTGTCTGGC...GAGGCTGTCAGGAATTCCCCTCACCTCGGAAAGGAACTTCTCAGTTTTATTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
3UTR GCA 72 bp CGGCAGAGGCTGGACTCTTCCCTCCACCATCCAATCTaGATGTCAAAGAATGCGACCGGGTGGGAAGCACCT +
Preference number: 3 (lower is better)
Translates to: RQRLDSSLHHPI*MSKNATGWEAP
Trigger: AGGTGCTTCCCACCCGGTCGCATTCTTTGACATGCAGATTGGATGGTGGAGGGAAGAGTCCAGCCTCTGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
3UTR CCA 72 bp CACCATCCAATCTGCATGTCAAAGAATGCGACCGGGTaGGAAGCACCTGGACTCCGTGACACCAAGACGGTT +
Preference number: 3 (lower is better)
Translates to: HHPICMSKNATG*EAPGLRDTKTV
Trigger: AACCGTCTTGGTGTCACGGAGTCCAGGTGCTTCCCACCCGGTCGCATTCTTTGACATGCAGATTGGATGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
3UTR-3UTR CAA 90 bp AAAACTGAGAAGTTCCTTTCCGAGGTGAGGGGAATTCCTGACAGCCTCCCTGAGGTGCTGCACATAAGCTaGTGGTCACTACGCAGCCTG +
Preference number: 3 (lower is better)
Translates to: KTEKFLSEVRGIPDSLPEVLHIS*WSLRSL
Trigger: CAGGCTGCGTAGTGACCACAAGCTTATGTGCAGCAC...CTCAGGGAGGCTGTCAGGAATTCCCCTCACCTCGGAAAGGAACTTCTCAGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR GCA 90 bp CGGAGCTCCGGCCGTAGCACTCCCGGGCGCGCAGCCCACACAGGTGGCCTCCACGAGGCCATGGCCACCTaGAGAGCCTGCGCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: RSSGRSTPGRAAHTGGLHEAMAT*RACASR
Trigger: CCGGCTGGCGCAGGCTCTGCAGGTGGCCATGGCCTC...GTGGAGGCCACCTGTGTGGGCTGCGCGCCCGGGAGTGCTACGGCCGGAGCTCCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445375.5
CDS-3UTR CCA 90 bp GCCGTAGCACTCCCGGGCGCGCAGCCCACACAGGTGGCCTCCACGTCAGCCTCTTCTGCACGGGGCCTGTaGCCCACGGAGCTCCGGCCG +
Preference number: 4 (lower is better)
Translates to: AVALPGAQPTQVASTSASSARGL*PTELRP
Trigger: CGGCCGGAGCTCCGTGGGCCACAGGCCCCGTGCAGA...AGAGGCTGACGTGGAGGCCACCTGTGTGGGCTGCGCGCCCGGGAGTGCTACGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445375.5
CDS-3UTR CCA 90 bp GGAGCTCCGGCCGTAGCACTCCCGGGCGCGCAGCCCACACAGGTGGCCTCCACGCGGGGGTCCAGGCGGTaGACACGGAGAAGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: GAPAVALPGAQPTQVASTRGSRR*TRRSSG
Trigger: GCCACTGCTTCTCCGTGTCCACCGCCTGGACCCCCG...CGTGGAGGCCACCTGTGTGGGCTGCGCGCCCGGGAGTGCTACGGCCGGAGCTCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445375.5
CDS-3UTR GCA 90 bp GGAGCTCCGGCCGTAGCACTCCCGGGCGCGCAGCCCACACAGGTGGCCTCCACGCTCCACGTCAGCCTCTaGGGCTCTCTGCTGCGCTGG +
Preference number: 4 (lower is better)
Translates to: GAPAVALPGAQPTQVASTLHVSL*GSLLRW
Trigger: CCAGCGCAGCAGAGAGCCGCAGAGGCTGACGTGGAG...CGTGGAGGCCACCTGTGTGGGCTGCGCGCCCGGGAGTGCTACGGCCGGAGCTCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445375.5
CDS-3UTR CCA 90 bp GGGGCCTGTGGCCCACGGAGCTCCGGCCGTAGCACTCCCGGGCGCGCAGCCCACGGCTCTCTGCTGCGCTaGGACACACAGAACAGCTGG +
Preference number: 4 (lower is better)
Translates to: GACGPRSSGRSTPGRAAHGSLLR*DTQNSW
Trigger: CCAGCTGTTCTGTGTGTCCCAGCGCAGCAGAGAGCC...GTGGGCTGCGCGCCCGGGAGTGCTACGGCCGGAGCTCCGTGGGCCACAGGCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445375.5
CDS-3UTR CCA 90 bp GAGTGGGCTCTGCACGGGGCCTGTGGCCCACGGAGCTCCGGCCGTAGCACTCCCCGCAGCCCACACAGGTaGCCTCCACGTCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: EWALHGACGPRSSGRSTPRSPHR*PPRQPL
Trigger: CAGAGGCTGACGTGGAGGCCACCTGTGTGGGCTGCG...GGGAGTGCTACGGCCGGAGCTCCGTGGGCCACAGGCCCCGTGCAGAGCCCACTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445375.5
CDS-3UTR CCA 90 bp CGTGGGAGTGGGCTCTGCACGGGGCCTGTGGCCCACGGAGCTCCGGCCGTAGCAACAGGCGAGGATGCGTaGGAGTGGGCTCTGCACGGG +
Preference number: 4 (lower is better)
Translates to: RGSGLCTGPVAHGAPAVATGEDA*EWALHG
Trigger: CCCGTGCAGAGCCCACTCCCACGCATCCTCGCCTGT...TGCTACGGCCGGAGCTCCGTGGGCCACAGGCCCCGTGCAGAGCCCACTCCCACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445375.5
CDS-3UTR CCA 90 bp GCACGGACCACCCGGGGGTCCAGGCGGTGGACACGGAGAAGCAGTGGCAGAGCCGAGGATGCGTGGGAGTaGGCTCTGCACGGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: ARTTRGSRRWTRRSSGRAEDAWE*ALHGAC
Trigger: ACAGGCCCCGTGCAGAGCCCACTCCCACGCATCCTC...GGCTCTGCCACTGCTTCTCCGTGTCCACCGCCTGGACCCCCGGGTGGTCCGTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445375.5
CDS-3UTR CCA 90 bp CCGGCCGTAGCACTCCCGGGCGCGCAGCCCACACAGGTGGCCTCCACGTCAGCCGACACGGAGAAGCAGTaGCAGAGCCAGGACCCCACA +
Preference number: 4 (lower is better)
Translates to: PAVALPGAQPTQVASTSADTEKQ*QSQDPT
Trigger: TGTGGGGTCCTGGCTCTGCCACTGCTTCTCCGTGTC...GGCTGACGTGGAGGCCACCTGTGTGGGCTGCGCGCCCGGGAGTGCTACGGCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445375.5
CDS-3UTR GCA 90 bp GCCTGTGGCCCACGGAGCTCCGGCCGTAGCACTCCCGGGCGCGCAGCCCACACATCTGCGGCTCTCTGCTaGGCTGGGACACACAGAACA +
Preference number: 4 (lower is better)
Translates to: ACGPRSSGRSTPGRAAHTSAALC*AGTHRT
Trigger: TGTTCTGTGTGTCCCAGCGCAGCAGAGAGCCGCAGA...TGTGTGGGCTGCGCGCCCGGGAGTGCTACGGCCGGAGCTCCGTGGGCCACAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445375.5
CDS-3UTR GCA 90 bp GCACGGACCACCCGGGGGTCCAGGCGGTGGACACGGAGAAGCAGTGGCAGAGCCGCCTCTGCGGCTCTCTaGTGCGCTGGGACACACAGA +
Preference number: 4 (lower is better)
Translates to: ARTTRGSRRWTRRSSGRAASAAL*CAGTHR
Trigger: TCTGTGTGTCCCAGCGCAGCAGAGAGCCGCAGAGGC...GGCTCTGCCACTGCTTCTCCGTGTCCACCGCCTGGACCCCCGGGTGGTCCGTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445375.5
CDS-3UTR CCA 90 bp GGAGCTCCGGCCGTAGCACTCCCGGGCGCGCAGCCCACACAGGTGGCCTCCACGGAGAGCTCAATCTCCTaGGAGGCGTTGAGGGGGTTC +
Preference number: 4 (lower is better)
Translates to: GAPAVALPGAQPTQVASTESSIS*EALRGF
Trigger: GAACCCCCTCAACGCCTCCCAGGAGATTGAGCTCTC...CGTGGAGGCCACCTGTGTGGGCTGCGCGCCCGGGAGTGCTACGGCCGGAGCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445375.5
CDS-3UTR CCA 90 bp TCCGGCCGTAGCACTCCCGGGCGCGCAGCCCACACAGGTGGCCTCCACGTCAGCGAAGCCCCAGGAAGCTaGCCTTGCAAACGACCCCGA +
Preference number: 4 (lower is better)
Translates to: SGRSTPGRAAHTGGLHVSEAPGS*PCKRPR
Trigger: TCGGGGTCGTTTGCAAGGCCAGCTTCCTGGGGCTTC...GCTGACGTGGAGGCCACCTGTGTGGGCTGCGCGCCCGGGAGTGCTACGGCCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445375.5
CDS-3UTR TCA 90 bp GGGAGTGGGCTCTGCACGGGGCCTGTGGCCCACGGAGCTCCGGCCGTAGCACTCCATCCGCCAACCTGTTaGTCTCCTCTACCAGCGGGA +
Preference number: 4 (lower is better)
Translates to: GSGLCTGPVAHGAPAVALHPPTC*SPLPAG
Trigger: TCCCGCTGGTAGAGGAGATCAACAGGTTGGCGGATG...GAGTGCTACGGCCGGAGCTCCGTGGGCCACAGGCCCCGTGCAGAGCCCACTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445375.5
CDS-3UTR GCA 90 bp GGGTGGGAAGCACCTGGACTCCGTGACACCAAGACGGTTCTGCCGGCGGGGAGGTGCACCCGTGGCTCCTaGCGTCACACTCCTCGCCAC +
Preference number: 4 (lower is better)
Translates to: GWEAPGLRDTKTVLPAGRCTRGS*RHTPRH
Trigger: GTGGCGAGGAGTGTGACGGCAGGAGCCACGGGTGCA...CCTCCCCGCCGGCAGAACCGTCTTGGTGTCACGGAGTCCAGGTGCTTCCCACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR GCA 90 bp CTGCACGGGGCCTGTGGCCCACGGAGCTCCGGCCGTAGCACTCCCGGGCGCGCACCAGGAAGCTGGCCTTaGAAACGACCCCGAAATTCA +
Preference number: 4 (lower is better)
Translates to: LHGACGPRSSGRSTPGRAPGSWP*KRPRNS
Trigger: TGAATTTCGGGGTCGTTTGCAAGGCCAGCTTCCTGG...TGCGCGCCCGGGAGTGCTACGGCCGGAGCTCCGTGGGCCACAGGCCCCGTGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445375.5
CDS-3UTR CCA 90 bp CAGGACCCCACAGGCGAGGATGCGTGGGAGTGGGCTCTGCACGGGGCCTGTGGCACCAGCGGGACCATGTaGTCGAAGAGGATCAGCCCC +
Preference number: 4 (lower is better)
Translates to: QDPTGEDAWEWALHGACGTSGTM*SKRISP
Trigger: GGGGCTGATCCTCTTCGACCACATGGTCCCGCTGGT...GCCACAGGCCCCGTGCAGAGCCCACTCCCACGCATCCTCGCCTGTGGGGTCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445375.5
CDS-3UTR CCA 90 bp GAAGCACCTGGACTCCGTGACACCAAGACGGTTCTGCCGGCGGGGAGGGGCTGCGGTCACTACGCAGCCTaGGCTCAGCTCACGGGGCTG +
Preference number: 4 (lower is better)
Translates to: EAPGLRDTKTVLPAGRGCGHYAA*AQLTGL
Trigger: CAGCCCCGTGAGCTGAGCCCAGGCTGCGTAGTGACC...GCAGCCCCTCCCCGCCGGCAGAACCGTCTTGGTGTCACGGAGTCCAGGTGCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR GCA 90 bp AGTGGGCTCTGCACGGGGCCTGTGGCCCACGGAGCTCCGGCCGTAGCACTCCCGTTCTTCTCGGTCAGGTaGAGCTGCAGCGTCATGAGC +
Preference number: 4 (lower is better)
Translates to: SGLCTGPVAHGAPAVALPFFSVR*SCSVMS
Trigger: GCTCATGACGCTGCAGCTGCACCTGACCGAGAAGAA...CGGGAGTGCTACGGCCGGAGCTCCGTGGGCCACAGGCCCCGTGCAGAGCCCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445375.5
CDS-3UTR CCA 90 bp GCTCTGCACGGGGCCTGTGGCCCACGGAGCTCCGGCCGTAGCACTCCCGGGCGCTATTATGGGGCAGCCTaGAGCACAAGGTTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: ALHGACGPRSSGRSTPGRYYGAA*STRFSG
Trigger: ACCTGAGAACCTTGTGCTCCAGGCTGCCCCATAATA...GCGCCCGGGAGTGCTACGGCCGGAGCTCCGTGGGCCACAGGCCCCGTGCAGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445375.5
CDS-3UTR TCA 90 bp CCCACAGGCGAGGATGCGTGGGAGTGGGCTCTGCACGGGGCCTGTGGCCCACGGGCTGAGGTGGAGTTTTaGGTACAAGAGGTGGGAGTC +
Preference number: 4 (lower is better)
Translates to: PTGEDAWEWALHGACGPRAEVEF*VQEVGV
Trigger: GACTCCCACCTCTTGTACTCAAAACTCCACCTCAGC...CCGTGGGCCACAGGCCCCGTGCAGAGCCCACTCCCACGCATCCTCGCCTGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445375.5
CDS-3UTR TCA 90 bp TCTGGGAGTCCGGCCACCCCTTCCATCTCGAAAGGCTTCGTCCAGCGAGAGCGCCCTAGCGGATGGGCCTaGAGGGAAAGGTCACGCCGG +
Preference number: 4 (lower is better)
Translates to: SGSPATPSISKGFVQRERPSGWA*RERSRR
Trigger: CCGGCGTGACCTTTCCCTTCAGGCCCATCCGCTAGG...GCGCTCTCGCTGGACGAAGCCTTTCGAGATGGAAGGGGTGGCCGGACTCCCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR GCA 90 bp TGCACGGGACCCGAGATCACCAGCTGGAGGAGGCTGAATTCCAAGCAGAAGCCCGAGGCCATGGCCACCTaGAGAGCCTGCGCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: CTGPEITSWRRLNSKQKPEAMAT*RACASR
Trigger: CCGGCTGGCGCAGGCTCTGCAGGTGGCCATGGCCTC...GGGCTTCTGCTTGGAATTCAGCCTCCTCCAGCTGGTGATCTCGGGTCCCGTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440409.1
CDS-3UTR GCA 90 bp TCTGGGAGTCCGGCCACCCCTTCCATCTCGAAAGGCTTCGTCCAGCGAGAGCGCCCAGACACACGGGCTTaGACCCGTGGCTCCTGCCGT +
Preference number: 4 (lower is better)
Translates to: SGSPATPSISKGFVQRERPDTRA*TRGSCR
Trigger: ACGGCAGGAGCCACGGGTGCAAGCCCGTGTGTCTGG...GCGCTCTCGCTGGACGAAGCCTTTCGAGATGGAAGGGGTGGCCGGACTCCCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR CCA 90 bp GAAGCACCTGGACTCCGTGACACCAAGACGGTTCTGCCGGCGGGGAGGGGCTGCACCAGCGGGACCATGTaGTCGAAGAGGATCAGCCCC +
Preference number: 4 (lower is better)
Translates to: EAPGLRDTKTVLPAGRGCTSGTM*SKRISP
Trigger: GGGGCTGATCCTCTTCGACCACATGGTCCCGCTGGT...GCAGCCCCTCCCCGCCGGCAGAACCGTCTTGGTGTCACGGAGTCCAGGTGCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR CCA 90 bp GTCCGGCCACCCCTTCCATCTCGAAAGGCTTCGTCCAGCGAGAGCGCAGAAGGCCCGGAGATGAAGGTGTaGCCGGGATGCGTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: VRPPLPSRKASSSESAEGPEMKV*PGCVGR
Trigger: CCTGCCCACGCATCCCGGCCACACCTTCATCTCCGG...GCCTTCTGCGCTCTCGCTGGACGAAGCCTTTCGAGATGGAAGGGGTGGCCGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR CCA 90 bp GCACGGACCACCCGGGGGTCCAGGCGGTGGACACGGAGAAGCAGTGGCAGAGCCGACACACAGAACAGCTaGCCACAGTCTCCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: ARTTRGSRRWTRRSSGRADTQNS*PQSPQS
Trigger: GCTCTGAGGAGACTGTGGCCAGCTGTTCTGTGTGTC...GGCTCTGCCACTGCTTCTCCGTGTCCACCGCCTGGACCCCCGGGTGGTCCGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445375.5
CDS-3UTR GCA 90 bp AGGCACGGACCACCCGGGGGTCCAGGCGGTGGACACGGAGAAGCAGTGGCAGAGTCAGGTCATCTCTCGTaGACAGCAGAGCTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: RHGPPGGPGGGHGEAVAESGHLS*TAELLR
Trigger: CCTCAGGAGCTCTGCTGTGCACGAGAGATGACCTGA...CTCTGCCACTGCTTCTCCGTGTCCACCGCCTGGACCCCCGGGTGGTCCGTGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445375.5
CDS-3UTR CCA 90 bp GAGTGGGCTCTGCACGGGGCCTGTGGCCCACGGAGCTCCGGCCGTAGCACTCCCTGCAGGACGCTGAGGTaGAGTTTTGAGTACAAGAGG +
Preference number: 4 (lower is better)
Translates to: EWALHGACGPRSSGRSTPCRTLR*SFEYKR
Trigger: CCTCTTGTACTCAAAACTCCACCTCAGCGTCCTGCA...GGGAGTGCTACGGCCGGAGCTCCGTGGGCCACAGGCCCCGTGCAGAGCCCACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445375.5
CDS-3UTR GCA 90 bp AGAAGGAGCCCACTTTTTCTGGCGGGGACACATCGTCTTCACGAGGAAAGAGGCCCCGGGGCCCGGGACTaGGCCGCTACCCGTGGAAAC +
Preference number: 4 (lower is better)
Translates to: RRSPLFLAGTHRLHEERGPGARD*AATRGN
Trigger: GTTTCCACGGGTAGCGGCGCAGTCCCGGGCCCCGGG...GCCTCTTTCCTCGTGAAGACGATGTGTCCCCGCCAGAAAAAGTGGGCTCCTTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR CCA 90 bp GAAGCACCTGGACTCCGTGACACCAAGACGGTTCTGCCGGCGGGGAGGGGCTGCCCCGAGATCACCAGCTaGAGGAGGTTATTATGGGGC +
Preference number: 4 (lower is better)
Translates to: EAPGLRDTKTVLPAGRGCPEITS*RRLLWG
Trigger: GCCCCATAATAACCTCCTCCAGCTGGTGATCTCGGG...GCAGCCCCTCCCCGCCGGCAGAACCGTCTTGGTGTCACGGAGTCCAGGTGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR CCA 90 bp CCCTTCCCCGAGGTTCTCTTCTGGGAGTCCGGCCACCCCTTCCATCTCGAAAGGCCCGAGGTTCTCTTCTaGGAGTCCGGCCACCCCTTC +
Preference number: 4 (lower is better)
Translates to: PFPEVLFWESGHPFHLERPEVLF*ESGHPF
Trigger: GAAGGGGTGGCCGGACTCCCAGAAGAGAACCTCGGG...CCTTTCGAGATGGAAGGGGTGGCCGGACTCCCAGAAGAGAACCTCGGGGAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR CCA 90 bp CGAGGTTCTCTTCTGGGAGTCCGGCCACCCCTTCCATCTCGAAAGGCTTCGTCCACGGGCTTGCACCCGTaGCTCCTGCCGTCACACTCC +
Preference number: 4 (lower is better)
Translates to: RGSLLGVRPPLPSRKASSTGLHP*LLPSHS
Trigger: GGAGTGTGACGGCAGGAGCCACGGGTGCAAGCCCGT...GGACGAAGCCTTTCGAGATGGAAGGGGTGGCCGGACTCCCAGAAGAGAACCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR TCA 90 bp CACTCCTCGCCACACAGGCTGTGTCTGAAATGCGCAGAGAACAGAGGCTCCCAGAGGTCACGCCGGAGATaGAGGTGTGGCCGGGATGCG +
Preference number: 4 (lower is better)
Translates to: HSSPHRLCLKCAENRGSQRSRRR*RCGRDA
Trigger: CGCATCCCGGCCACACCTTCATCTCCGGCGTGACCT...CTGGGAGCCTCTGTTCTCTGCGCATTTCAGACACAGCCTGTGTGGCGAGGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR TCA 90 bp CCGTGGCTCCTGCCGTCACACTCCTCGCCACACAGGCTGTGTCTGAAATGCGCAAGCACCTGGACTCCGTaGCACCAAGACGGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: PWLLPSHSSPHRLCLKCASTWTP*HQDGSA
Trigger: GGCAGAACCGTCTTGGTGTCACGGAGTCCAGGTGCT...TGCGCATTTCAGACACAGCCTGTGTGGCGAGGAGTGTGACGGCAGGAGCCACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR GCA 90 bp GCAGAGGCTGGACTCTTCCCTCCACCATCCAATCTGCATGTCAAAGAATGCGACCCCGGGGCCCGGGACTaGGCCGCTACCCGTGGAAAC +
Preference number: 4 (lower is better)
Translates to: AEAGLFPPPSNLHVKECDPGARD*AATRGN
Trigger: GTTTCCACGGGTAGCGGCGCAGTCCCGGGCCCCGGG...GTCGCATTCTTTGACATGCAGATTGGATGGTGGAGGGAAGAGTCCAGCCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR GCA 90 bp ATCCAATCTGCATGTCAAAGAATGCGACCGGGTGGGAAGCACCTGGACTCCGTGGAGGCCATGGCCACCTaGAGAGCCTGCGCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: IQSACQRMRPGGKHLDSVEAMAT*RACASR
Trigger: CCGGCTGGCGCAGGCTCTGCAGGTGGCCATGGCCTC...CACGGAGTCCAGGTGCTTCCCACCCGGTCGCATTCTTTGACATGCAGATTGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR GCA 90 bp AGGCTGGACTCTTCCCTCCACCATCCAATCTGCATGTCAAAGAATGCGACCGGGGAGGCCATGGCCACCTaGAGAGCCTGCGCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: RLDSSLHHPICMSKNATGEAMAT*RACASR
Trigger: CCGGCTGGCGCAGGCTCTGCAGGTGGCCATGGCCTC...CCCGGTCGCATTCTTTGACATGCAGATTGGATGGTGGAGGGAAGAGTCCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR GCA 90 bp GAAGCACCTGGACTCCGTGACACCAAGACGGTTCTGCCGGCGGGGAGGGGCTGCAGGCTGTGTCTGAAATaGGCAGAGAACAGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: EAPGLRDTKTVLPAGRGCRLCLK*AENRGS
Trigger: GGAGCCTCTGTTCTCTGCGCATTTCAGACACAGCCT...GCAGCCCCTCCCCGCCGGCAGAACCGTCTTGGTGTCACGGAGTCCAGGTGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR GCA 90 bp GTCCGGCCACCCCTTCCATCTCGAAAGGCTTCGTCCAGCGAGAGCGCAGAAGGCACAGAGTCCTTGGTTTaGTCCTTGGGCTGCGCGCTG +
Preference number: 4 (lower is better)
Translates to: VRPPLPSRKASSSESAEGTESLV*SLGCAL
Trigger: CAGCGCGCAGCCCAAGGAGCAAACCAAGGACTCTGT...GCCTTCTGCGCTCTCGCTGGACGAAGCCTTTCGAGATGGAAGGGGTGGCCGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359073.9
CDS-3UTR CCA 90 bp CGAGGTTCTCTTCTGGGAGTCCGGCCACCCCTTCCATCTCGAAAGGCTTCGTCCGCGCGCTGCGCTCCTTaGGCACCTGGAACACGAACT +
Preference number: 4 (lower is better)
Translates to: RGSLLGVRPPLPSRKASSARCAP*APGTRT
Trigger: AGTTCGTGTTCCAGGTGCCCAAGGAGCGCAGCGCGC...GGACGAAGCCTTTCGAGATGGAAGGGGTGGCCGGACTCCCAGAAGAGAACCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR CCA 90 bp GGGTGGGAAGCACCTGGACTCCGTGACACCAAGACGGTTCTGCCGGCGGGGAGGTGGAGGAGGTTATTATaGGGCAGCCTGGAGCACAAG +
Preference number: 4 (lower is better)
Translates to: GWEAPGLRDTKTVLPAGRWRRLL*GSLEHK
Trigger: CTTGTGCTCCAGGCTGCCCCATAATAACCTCCTCCA...CCTCCCCGCCGGCAGAACCGTCTTGGTGTCACGGAGTCCAGGTGCTTCCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR CCA 90 bp TTCTCTTCTGGGAGTCCGGCCACCCCTTCCATCTCGAAAGGCTTCGTCCAGCGACCGGAGATGAAGGTGTaGCCGGGATGCGTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: FSSGSPATPSISKGFVQRPEMKV*PGCVGR
Trigger: CCTGCCCACGCATCCCGGCCACACCTTCATCTCCGG...TCGCTGGACGAAGCCTTTCGAGATGGAAGGGGTGGCCGGACTCCCAGAAGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
3UTR CAA 72 bp ATCGTCTTCACGAGGAAAGAGGCCAGACACACGGGCTaGCACCCGTGGCTCCTGCCGTCACACTCCTCGCCA +
Preference number: 4 (lower is better)
Translates to: IVFTRKEARHTG*HPWLLPSHSSP
Trigger: TGGCGAGGAGTGTGACGGCAGGAGCCACGGGTGCAAGCCCGTGTGTCTGGCCTCTTTCCTCGTGAAGACGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR GCA 90 bp AAAACTGAGAAGTTCCTTTCCGAGGTGAGGGGAATTCCTGACAGCCTCCCTGAGTCAGGGGGCCATCGCTaGTGCCGCCGGCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: KTEKFLSEVRGIPDSLPESGGHR*CRRPAG
Trigger: GCCTGCTGGCCGGCGGCAGCAGCGATGGCCCCCTGA...CTCAGGGAGGCTGTCAGGAATTCCCCTCACCTCGGAAAGGAACTTCTCAGTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344417.10
CDS-3UTR GCA 90 bp ATCCAATCTGCATGTCAAAGAATGCGACCGGGTGGGAAGCACCTGGACTCCGTGACACCAAGACGGTTCTaGCGGCGGGGAGGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: IQSACQRMRPGGKHLDSVTPRRF*RRGGAA
Trigger: GGCAGCCCCTCCCCGCCGGCAGAACCGTCTTGGTGT...CACGGAGTCCAGGTGCTTCCCACCCGGTCGCATTCTTTGACATGCAGATTGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR GCA 90 bp CACCATCCAATCTGCATGTCAAAGAATGCGACCGGGTGGGAAGCACCTGGACTCACACCAAGACGGTTCTaGCGGCGGGGAGGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: HHPICMSKNATGWEAPGLTPRRF*RRGGAA
Trigger: GGCAGCCCCTCCCCGCCGGCAGAACCGTCTTGGTGT...GAGTCCAGGTGCTTCCCACCCGGTCGCATTCTTTGACATGCAGATTGGATGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR GCA 90 bp GGAGCCCACTTTTTCTGGCGGGGACACATCGTCTTCACGAGGAAAGAGGCCAGATGCACCCGTGGCTCCTaGCGTCACACTCCTCGCCAC +
Preference number: 4 (lower is better)
Translates to: GAHFFWRGHIVFTRKEARCTRGS*RHTPRH
Trigger: GTGGCGAGGAGTGTGACGGCAGGAGCCACGGGTGCA...TCTGGCCTCTTTCCTCGTGAAGACGATGTGTCCCCGCCAGAAAAAGTGGGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR GCA 90 bp TCTGCATGTCAAAGAATGCGACCGGGTGGGAAGCACCTGGACTCCGTGACACCACCAGACACACGGGCTTaGACCCGTGGCTCCTGCCGT +
Preference number: 4 (lower is better)
Translates to: SACQRMRPGGKHLDSVTPPDTRA*TRGSCR
Trigger: ACGGCAGGAGCCACGGGTGCAAGCCCGTGTGTCTGG...TGGTGTCACGGAGTCCAGGTGCTTCCCACCCGGTCGCATTCTTTGACATGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR CCA 90 bp CCCTTCCCCGAGGTTCTCTTCTGGGAGTCCGGCCACCCCTTCCATCTCGAAAGGGAGAGCTCAATCTCCTaGGAGGCGTTGAGGGGGTTC +
Preference number: 4 (lower is better)
Translates to: PFPEVLFWESGHPFHLERESSIS*EALRGF
Trigger: GAACCCCCTCAACGCCTCCCAGGAGATTGAGCTCTC...CCTTTCGAGATGGAAGGGGTGGCCGGACTCCCAGAAGAGAACCTCGGGGAAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR CCA 90 bp CCACACAGGCTGTGTCTGAAATGCGCAGAGAACAGAGGCTCCCAGGATCGGCATACGGGCTTGCACCCGTaGCTCCTGCCGTCACACTCC +
Preference number: 4 (lower is better)
Translates to: PHRLCLKCAENRGSQDRHTGLHP*LLPSHS
Trigger: GGAGTGTGACGGCAGGAGCCACGGGTGCAAGCCCGT...ATGCCGATCCTGGGAGCCTCTGTTCTCTGCGCATTTCAGACACAGCCTGTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR CCA 90 bp TCTGGGAGTCCGGCCACCCCTTCCATCTCGAAAGGCTTCGTCCAGCGAGAGCGCCTGCACATAAGCTTGTaGTCACTACGCAGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: SGSPATPSISKGFVQRERLHISL*SLRSLG
Trigger: GCCCAGGCTGCGTAGTGACCACAAGCTTATGTGCAG...GCGCTCTCGCTGGACGAAGCCTTTCGAGATGGAAGGGGTGGCCGGACTCCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR TCA 90 bp CTGGGAGTCCGGCCACCCCTTCCATCTCGAAAGGCTTCGTCCAGCGAGAGCGCAATCTGCTTCAGCGTCTaGATGGATCCCGGCACCAAA +
Preference number: 4 (lower is better)
Translates to: LGVRPPLPSRKASSSESAICFSV*MDPGTK
Trigger: TTTGGTGCCGGGATCCATTCAGACGCTGAAGCAGAT...TGCGCTCTCGCTGGACGAAGCCTTTCGAGATGGAAGGGGTGGCCGGACTCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR TCA 90 bp TGCACGGGACCCGAGATCACCAGCTGGAGGAGGCTGAATTCCAAGCAGAAGCCCCATCCGCCAACCTGTTaGTCTCCTCTACCAGCGGGA +
Preference number: 4 (lower is better)
Translates to: CTGPEITSWRRLNSKQKPHPPTC*SPLPAG
Trigger: TCCCGCTGGTAGAGGAGATCAACAGGTTGGCGGATG...GGGCTTCTGCTTGGAATTCAGCCTCCTCCAGCTGGTGATCTCGGGTCCCGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440409.1
CDS-3UTR TCA 90 bp AGGCTGGACTCTTCCCTCCACCATCCAATCTGCATGTCAAAGAATGCGACCGGGCCTAGCGGATGGGCCTaGAGGGAAAGGTCACGCCGG +
Preference number: 4 (lower is better)
Translates to: RLDSSLHHPICMSKNATGPSGWA*RERSRR
Trigger: CCGGCGTGACCTTTCCCTTCAGGCCCATCCGCTAGG...CCCGGTCGCATTCTTTGACATGCAGATTGGATGGTGGAGGGAAGAGTCCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR GCA 90 bp CCCTTCCCCGAGGTTCTCTTCTGGGAGTCCGGCCACCCCTTCCATCTCGAAAGGTTCTTCTCGGTCAGGTaGAGCTGCAGCGTCATGAGC +
Preference number: 4 (lower is better)
Translates to: PFPEVLFWESGHPFHLERFFSVR*SCSVMS
Trigger: GCTCATGACGCTGCAGCTGCACCTGACCGAGAAGAA...CCTTTCGAGATGGAAGGGGTGGCCGGACTCCCAGAAGAGAACCTCGGGGAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR CCA 90 bp CCACACAGGCTGTGTCTGAAATGCGCAGAGAACAGAGGCTCCCAGGATCGGCATCTGCGCCGCTACCCGTaGAAACAAAGAGGCGCGACC +
Preference number: 4 (lower is better)
Translates to: PHRLCLKCAENRGSQDRHLRRYP*KQRGAT
Trigger: GGTCGCGCCTCTTTGTTTCCACGGGTAGCGGCGCAG...ATGCCGATCCTGGGAGCCTCTGTTCTCTGCGCATTTCAGACACAGCCTGTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR CCA 90 bp CACCCGTGGCTCCTGCCGTCACACTCCTCGCCACACAGGCTGTGTCTGAAATGCGCTTCAGCGTCTGAATaGATCCCGGCACCAAACAGC +
Preference number: 4 (lower is better)
Translates to: HPWLLPSHSSPHRLCLKCASASE*IPAPNS
Trigger: GCTGTTTGGTGCCGGGATCCATTCAGACGCTGAAGC...GCATTTCAGACACAGCCTGTGTGGCGAGGAGTGTGACGGCAGGAGCCACGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR CCA 90 bp CCGTGGCTCCTGCCGTCACACTCCTCGCCACACAGGCTGTGTCTGAAATGCGCAACGGAGGTGATGAACTaGCAGCAGAATCTCGGGCTG +
Preference number: 4 (lower is better)
Translates to: PWLLPSHSSPHRLCLKCATEVMN*QQNLGL
Trigger: CAGCCCGAGATTCTGCTGCCAGTTCATCACCTCCGT...TGCGCATTTCAGACACAGCCTGTGTGGCGAGGAGTGTGACGGCAGGAGCCACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR CCA 90 bp TGCACGGGACCCGAGATCACCAGCTGGAGGAGGCTGAATTCCAAGCAGAAGCCCGAGAGCTCAATCTCCTaGGAGGCGTTGAGGGGGTTC +
Preference number: 4 (lower is better)
Translates to: CTGPEITSWRRLNSKQKPESSIS*EALRGF
Trigger: GAACCCCCTCAACGCCTCCCAGGAGATTGAGCTCTC...GGGCTTCTGCTTGGAATTCAGCCTCCTCCAGCTGGTGATCTCGGGTCCCGTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440409.1
CDS-3UTR CCA 90 bp ATCCAATCTGCATGTCAAAGAATGCGACCGGGTGGGAAGCACCTGGACTCCGTGGGTCACTACGCAGCCTaGGCTCAGCTCACGGGGCTG +
Preference number: 4 (lower is better)
Translates to: IQSACQRMRPGGKHLDSVGHYAA*AQLTGL
Trigger: CAGCCCCGTGAGCTGAGCCCAGGCTGCGTAGTGACC...CACGGAGTCCAGGTGCTTCCCACCCGGTCGCATTCTTTGACATGCAGATTGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR CCA 90 bp GAGATCACCAGCTGGAGGAGGCTGAATTCCAAGCAGAAGCCCCAGGAAGCTGGCGAAGCCCCAGGAAGCTaGCCTTGCAAACGACCCCGA +
Preference number: 4 (lower is better)
Translates to: EITSWRRLNSKQKPQEAGEAPGS*PCKRPR
Trigger: TCGGGGTCGTTTGCAAGGCCAGCTTCCTGGGGCTTC...GCCAGCTTCCTGGGGCTTCTGCTTGGAATTCAGCCTCCTCCAGCTGGTGATCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000440409.1
CDS-3UTR GCA 90 bp TGCACGGGACCCGAGATCACCAGCTGGAGGAGGCTGAATTCCAAGCAGAAGCCCTCAGGTCATCTCTCGTaGACAGCAGAGCTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: CTGPEITSWRRLNSKQKPSGHLS*TAELLR
Trigger: CCTCAGGAGCTCTGCTGTGCACGAGAGATGACCTGA...GGGCTTCTGCTTGGAATTCAGCCTCCTCCAGCTGGTGATCTCGGGTCCCGTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440409.1
CDS-3UTR CCA 90 bp AGCCCACTTTTTCTGGCGGGGACACATCGTCTTCACGAGGAAAGAGGCCAGACACTGCGCCGCTACCCGTaGAAACAAAGAGGCGCGACC +
Preference number: 4 (lower is better)
Translates to: SPLFLAGTHRLHEERGQTLRRYP*KQRGAT
Trigger: GGTCGCGCCTCTTTGTTTCCACGGGTAGCGGCGCAG...TGTCTGGCCTCTTTCCTCGTGAAGACGATGTGTCCCCGCCAGAAAAAGTGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR CCA 90 bp CTTTTAAAAATGCACGCAGCAGGCTCTCGGCAGAGGCTGGACTCTTCCCTCCACGCGCGCTGCGCTCCTTaGGCACCTGGAACACGAACT +
Preference number: 4 (lower is better)
Translates to: LLKMHAAGSRQRLDSSLHARCAP*APGTRT
Trigger: AGTTCGTGTTCCAGGTGCCCAAGGAGCGCAGCGCGC...GTGGAGGGAAGAGTCCAGCCTCTGCCGAGAGCCTGCTGCGTGCATTTTTAAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR CCA 90 bp GGAGCCCACTTTTTCTGGCGGGGACACATCGTCTTCACGAGGAAAGAGGCCAGAACCAGCGGGACCATGTaGTCGAAGAGGATCAGCCCC +
Preference number: 4 (lower is better)
Translates to: GAHFFWRGHIVFTRKEARTSGTM*SKRISP
Trigger: GGGGCTGATCCTCTTCGACCACATGGTCCCGCTGGT...TCTGGCCTCTTTCCTCGTGAAGACGATGTGTCCCCGCCAGAAAAAGTGGGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR CCA 90 bp CACCCGTGGCTCCTGCCGTCACACTCCTCGCCACACAGGCTGTGTCTGAAATGCTGGAGGAGGTTATTATaGGGCAGCCTGGAGCACAAG +
Preference number: 4 (lower is better)
Translates to: HPWLLPSHSSPHRLCLKCWRRLL*GSLEHK
Trigger: CTTGTGCTCCAGGCTGCCCCATAATAACCTCCTCCA...GCATTTCAGACACAGCCTGTGTGGCGAGGAGTGTGACGGCAGGAGCCACGGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR CCA 90 bp TTCCATCTCGAAAGGCTTCGTCCAGCGAGAGCGCAGAAGGCACACACGGGCCAGCCCGAGATCACCAGCTaGAGGAGGTTATTATGGGGC +
Preference number: 4 (lower is better)
Translates to: FHLERLRPARAQKAHTGQPEITS*RRLLWG
Trigger: GCCCCATAATAACCTCCTCCAGCTGGTGATCTCGGG...CTGGCCCGTGTGTGCCTTCTGCGCTCTCGCTGGACGAAGCCTTTCGAGATGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR CCA 90 bp CTTTTAAAAATGCACGCAGCAGGCTCTCGGCAGAGGCTGGACTCTTCCCTCCACCCCGAGGTTCTCTTCTaGGAGTCCGGCCACCCCTTC +
Preference number: 4 (lower is better)
Translates to: LLKMHAAGSRQRLDSSLHPEVLF*ESGHPF
Trigger: GAAGGGGTGGCCGGACTCCCAGAAGAGAACCTCGGG...GTGGAGGGAAGAGTCCAGCCTCTGCCGAGAGCCTGCTGCGTGCATTTTTAAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR CCA 90 bp CATAAGCTTGTGGTCACTACGCAGCCTGGGCTCAGCTCACGGGGCTGCAGAAGGCTGCACATAAGCTTGTaGTCACTACGCAGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: HKLVVTTQPGLSSRGCRRLHISL*SLRSLG
Trigger: GCCCAGGCTGCGTAGTGACCACAAGCTTATGTGCAG...CCTTCTGCAGCCCCGTGAGCTGAGCCCAGGCTGCGTAGTGACCACAAGCTTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR TCA 90 bp TTCCATCTCGAAAGGCTTCGTCCAGCGAGAGCGCAGAAGGCACACACGGGCCAGATCTGCTTCAGCGTCTaGATGGATCCCGGCACCAAA +
Preference number: 4 (lower is better)
Translates to: FHLERLRPARAQKAHTGQICFSV*MDPGTK
Trigger: TTTGGTGCCGGGATCCATTCAGACGCTGAAGCAGAT...CTGGCCCGTGTGTGCCTTCTGCGCTCTCGCTGGACGAAGCCTTTCGAGATGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR TCA 90 bp CCCGAGGTTCTCTTCTGGGAGTCCGGCCACCCCTTCCATCTCGAAAGGCTTCGTGCTGAGGTGGAGTTTTaGGTACAAGAGGTGGGAGTC +
Preference number: 4 (lower is better)
Translates to: PEVLFWESGHPFHLERLRAEVEF*VQEVGV
Trigger: GACTCCCACCTCTTGTACTCAAAACTCCACCTCAGC...ACGAAGCCTTTCGAGATGGAAGGGGTGGCCGGACTCCCAGAAGAGAACCTCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344417.10
CDS-3UTR TCA 90 bp AAAACTGAGAAGTTCCTTTCCGAGGTGAGGGGAATTCCTGACAGCCTCCCTGAGAGGTCACGCCGGAGATaGAGGTGTGGCCGGGATGCG +
Preference number: 4 (lower is better)
Translates to: KTEKFLSEVRGIPDSLPERSRRR*RCGRDA
Trigger: CGCATCCCGGCCACACCTTCATCTCCGGCGTGACCT...CTCAGGGAGGCTGTCAGGAATTCCCCTCACCTCGGAAAGGAACTTCTCAGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR TCA 90 bp CACCATCCAATCTGCATGTCAAAGAATGCGACCGGGTGGGAAGCACCTGGACTCAGCACCTGGACTCCGTaGCACCAAGACGGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: HHPICMSKNATGWEAPGLSTWTP*HQDGSA
Trigger: GGCAGAACCGTCTTGGTGTCACGGAGTCCAGGTGCT...GAGTCCAGGTGCTTCCCACCCGGTCGCATTCTTTGACATGCAGATTGGATGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR GCA 90 bp GGAGCCCACTTTTTCTGGCGGGGACACATCGTCTTCACGAGGAAAGAGGCCAGATCGGTCAGGTGCAGCTaGAGCGTCATGAGCACTTGC +
Preference number: 4 (lower is better)
Translates to: GAHFFWRGHIVFTRKEARSVRCS*SVMSTC
Trigger: GCAAGTGCTCATGACGCTGCAGCTGCACCTGACCGA...TCTGGCCTCTTTCCTCGTGAAGACGATGTGTCCCCGCCAGAAAAAGTGGGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR GCA 90 bp TTCTCTTCTGGGAGTCCGGCCACCCCTTCCATCTCGAAAGGCTTCGTCCAGCGACTCAGCTCACGGGGCTaGAGAAGGAGCCCACTTTTT +
Preference number: 4 (lower is better)
Translates to: FSSGSPATPSISKGFVQRLSSRG*RRSPLF
Trigger: AAAAAGTGGGCTCCTTCTGCAGCCCCGTGAGCTGAG...TCGCTGGACGAAGCCTTTCGAGATGGAAGGGGTGGCCGGACTCCCAGAAGAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR GCA 90 bp TGCACGGGACCCGAGATCACCAGCTGGAGGAGGCTGAATTCCAAGCAGAAGCCCCCAGGAAGCTGGCCTTaGAAACGACCCCGAAATTCA +
Preference number: 4 (lower is better)
Translates to: CTGPEITSWRRLNSKQKPPGSWP*KRPRNS
Trigger: TGAATTTCGGGGTCGTTTGCAAGGCCAGCTTCCTGG...GGGCTTCTGCTTGGAATTCAGCCTCCTCCAGCTGGTGATCTCGGGTCCCGTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440409.1
CDS-3UTR CCA 90 bp CATAAGCTTGTGGTCACTACGCAGCCTGGGCTCAGCTCACGGGGCTGCAGAAGGACACAGCCACCGCCATaGAGACCAGTTTTCCCAACA +
Preference number: 4 (lower is better)
Translates to: HKLVVTTQPGLSSRGCRRTQPPP*RPVFPT
Trigger: TGTTGGGAAAACTGGTCTCCATGGCGGTGGCTGTGT...CCTTCTGCAGCCCCGTGAGCTGAGCCCAGGCTGCGTAGTGACCACAAGCTTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR CCA 90 bp TCCGGCCACCCCTTCCATCTCGAAAGGCTTCGTCCAGCGAGAGCGCAGAAGGCATATTATGGGGCAGCCTaGAGCACAAGGTTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: SGHPFHLERLRPARAQKAYYGAA*STRFSG
Trigger: ACCTGAGAACCTTGTGCTCCAGGCTGCCCCATAATA...TGCCTTCTGCGCTCTCGCTGGACGAAGCCTTTCGAGATGGAAGGGGTGGCCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR CCA 90 bp ATCCAATCTGCATGTCAAAGAATGCGACCGGGTGGGAAGCACCTGGACTCCGTGGCTCTCGGCAGAGGCTaGACTCTTCCCTCCACCATC +
Preference number: 4 (lower is better)
Translates to: IQSACQRMRPGGKHLDSVALGRG*TLPSTI
Trigger: GATGGTGGAGGGAAGAGTCCAGCCTCTGCCGAGAGC...CACGGAGTCCAGGTGCTTCCCACCCGGTCGCATTCTTTGACATGCAGATTGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR CCA 90 bp GCAGAAGGAGCCCACTTTTTCTGGCGGGGACACATCGTCTTCACGAGGAAAGAGGCTCTCGGCAGAGGCTaGACTCTTCCCTCCACCATC +
Preference number: 4 (lower is better)
Translates to: AEGAHFFWRGHIVFTRKEALGRG*TLPSTI
Trigger: GATGGTGGAGGGAAGAGTCCAGCCTCTGCCGAGAGC...CTCTTTCCTCGTGAAGACGATGTGTCCCCGCCAGAAAAAGTGGGCTCCTTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR CCA 90 bp GAGATCACCAGCTGGAGGAGGCTGAATTCCAAGCAGAAGCCCCAGGAAGCTGGCCCCGAGATCACCAGCTaGAGGAGGCTGAATTCCAAG +
Preference number: 4 (lower is better)
Translates to: EITSWRRLNSKQKPQEAGPEITS*RRLNSK
Trigger: CTTGGAATTCAGCCTCCTCCAGCTGGTGATCTCGGG...GCCAGCTTCCTGGGGCTTCTGCTTGGAATTCAGCCTCCTCCAGCTGGTGATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440409.1
CDS-3UTR TCA 90 bp GGGTGGGAAGCACCTGGACTCCGTGACACCAAGACGGTTCTGCCGGCGGGGAGGCCTCAAAAATCCAGGTaGCAATCATTTCAAGCAAGT +
Preference number: 4 (lower is better)
Translates to: GWEAPGLRDTKTVLPAGRPQKSR*QSFQAS
Trigger: ACTTGCTTGAAATGATTGTCACCTGGATTTTTGAGG...CCTCCCCGCCGGCAGAACCGTCTTGGTGTCACGGAGTCCAGGTGCTTCCCACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR TCA 90 bp CTCCCAGGATCGGCATCTTTTAAAAATGCACGCAGCAGGCTCTCGGCAGAGGCTCATCCGCCAACCTGTTaGTCTCCTCTACCAGCGGGA +
Preference number: 4 (lower is better)
Translates to: LPGSASFKNARSRLSAEAHPPTC*SPLPAG
Trigger: TCCCGCTGGTAGAGGAGATCAACAGGTTGGCGGATG...AGCCTCTGCCGAGAGCCTGCTGCGTGCATTTTTAAAAGATGCCGATCCTGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR TCA 90 bp CACTCCTCGCCACACAGGCTGTGTCTGAAATGCGCAGAGAACAGAGGCTCCCAGCACACAGGCTGTGTCTaGAATGCGCAGAGAACAGAG +
Preference number: 4 (lower is better)
Translates to: HSSPHRLCLKCAENRGSQHTGCV*NAQRTE
Trigger: CTCTGTTCTCTGCGCATTTCAGACACAGCCTGTGTG...CTGGGAGCCTCTGTTCTCTGCGCATTTCAGACACAGCCTGTGTGGCGAGGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR TCA 90 bp CCACACAGGCTGTGTCTGAAATGCGCAGAGAACAGAGGCTCCCAGGATCGGCATAGTTCCTTTCCGAGGTaGGGGGAATTCCTGACAGCC +
Preference number: 4 (lower is better)
Translates to: PHRLCLKCAENRGSQDRHSSFPR*GEFLTA
Trigger: GGCTGTCAGGAATTCCCCTCACCTCGGAAAGGAACT...ATGCCGATCCTGGGAGCCTCTGTTCTCTGCGCATTTCAGACACAGCCTGTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR GCA 90 bp TTTTTCTGGCGGGGACACATCGTCTTCACGAGGAAAGAGGCCAGACACACGGGCAGCGTCATGAGCACTTaGAGGACGCTTGGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: FFWRGHIVFTRKEARHTGSVMST*RTLGSS
Trigger: TGAGGACCCAAGCGTCCTGCAAGTGCTCATGACGCT...GCCCGTGTGTCTGGCCTCTTTCCTCGTGAAGACGATGTGTCCCCGCCAGAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359073.9
CDS-3UTR CCA 90 bp TTCCATCTCGAAAGGCTTCGTCCAGCGAGAGCGCAGAAGGCACACACGGGCCAGTGCAGGACGCTGAGGTaGAGTTTTGAGTACAAGAGG +
Preference number: 4 (lower is better)
Translates to: FHLERLRPARAQKAHTGQCRTLR*SFEYKR
Trigger: CCTCTTGTACTCAAAACTCCACCTCAGCGTCCTGCA...CTGGCCCGTGTGTGCCTTCTGCGCTCTCGCTGGACGAAGCCTTTCGAGATGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344417.10
CDS-3UTR CCA 90 bp TTTAAAAATGCACGCAGCAGGCTCTCGGCAGAGGCTGGACTCTTCCCTCCACCAGAGAGCTCAATCTCCTaGGAGGCGTTGAGGGGGTTC +
Preference number: 4 (lower is better)
Translates to: FKNARSRLSAEAGLFPPPESSIS*EALRGF
Trigger: GAACCCCCTCAACGCCTCCCAGGAGATTGAGCTCTC...TGGTGGAGGGAAGAGTCCAGCCTCTGCCGAGAGCCTGCTGCGTGCATTTTTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR CCA 90 bp AGGCTGGACTCTTCCCTCCACCATCCAATCTGCATGTCAAAGAATGCGACCGGGAAGAATGCGACCGGGTaGGAAGCACCTGGACTCCGT +
Preference number: 4 (lower is better)
Translates to: RLDSSLHHPICMSKNATGKNATG*EAPGLR
Trigger: ACGGAGTCCAGGTGCTTCCCACCCGGTCGCATTCTT...CCCGGTCGCATTCTTTGACATGCAGATTGGATGGTGGAGGGAAGAGTCCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR CCA 90 bp ATCCAATCTGCATGTCAAAGAATGCGACCGGGTGGGAAGCACCTGGACTCCGTGAAGAATGCGACCGGGTaGGAAGCACCTGGACTCCGT +
Preference number: 4 (lower is better)
Translates to: IQSACQRMRPGGKHLDSVKNATG*EAPGLR
Trigger: ACGGAGTCCAGGTGCTTCCCACCCGGTCGCATTCTT...CACGGAGTCCAGGTGCTTCCCACCCGGTCGCATTCTTTGACATGCAGATTGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR CCA 90 bp TTCCATCTCGAAAGGCTTCGTCCAGCGAGAGCGCAGAAGGCACACACGGGCCAGCACTTGCAGGACGCTTaGGTCCTCAAAAATCCAGGT +
Preference number: 4 (lower is better)
Translates to: FHLERLRPARAQKAHTGQHLQDA*VLKNPG
Trigger: ACCTGGATTTTTGAGGACCCAAGCGTCCTGCAAGTG...CTGGCCCGTGTGTGCCTTCTGCGCTCTCGCTGGACGAAGCCTTTCGAGATGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359073.9
CDS-3UTR CCA 90 bp TGCACGGGACCCGAGATCACCAGCTGGAGGAGGCTGAATTCCAAGCAGAAGCCCACTACCGTCTTATTATaGGGCAGCCTGGAGCACAAG +
Preference number: 4 (lower is better)
Translates to: CTGPEITSWRRLNSKQKPTTVLL*GSLEHK
Trigger: CTTGTGCTCCAGGCTGCCCCATAATAAGACGGTAGT...GGGCTTCTGCTTGGAATTCAGCCTCCTCCAGCTGGTGATCTCGGGTCCCGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440409.1
CDS-3UTR TCA 90 bp CAGGATCGGCATCTTTTAAAAATGCACGCAGCAGGCTCTCGGCAGAGGCTGGACAGTTCCTTTCCGAGGTaGGGGGAATTCCTGACAGCC +
Preference number: 4 (lower is better)
Translates to: QDRHLLKMHAAGSRQRLDSSFPR*GEFLTA
Trigger: GGCTGTCAGGAATTCCCCTCACCTCGGAAAGGAACT...GTCCAGCCTCTGCCGAGAGCCTGCTGCGTGCATTTTTAAAAGATGCCGATCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR TCA 90 bp AAAACTGAGAAGTTCCTTTCCGAGGTGAGGGGAATTCCTGACAGCCTCCCTGAGGCAGCTGCAGCGTCATaGGCACTTGCAGGACGCTTG +
Preference number: 4 (lower is better)
Translates to: KTEKFLSEVRGIPDSLPEAAAAS*ALAGRL
Trigger: CAAGCGTCCTGCAAGTGCTCATGACGCTGCAGCTGC...CTCAGGGAGGCTGTCAGGAATTCCCCTCACCTCGGAAAGGAACTTCTCAGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359073.9
CDS-3UTR GCA 90 bp CACCATCCAATCTGCATGTCAAAGAATGCGACCGGGTGGGAAGCACCTGGACTCTTCTTCTCGGTCAGGTaGAGCTGCAGCGTCATGAGC +
Preference number: 4 (lower is better)
Translates to: HHPICMSKNATGWEAPGLFFSVR*SCSVMS
Trigger: GCTCATGACGCTGCAGCTGCACCTGACCGAGAAGAA...GAGTCCAGGTGCTTCCCACCCGGTCGCATTCTTTGACATGCAGATTGGATGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR GCA 90 bp ATCCAATCTGCATGTCAAAGAATGCGACCGGGTGGGAAGCACCTGGACTCCGTGTCAGGTCATCTCTCGTaGACAGCAGAGCTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: IQSACQRMRPGGKHLDSVSGHLS*TAELLR
Trigger: CCTCAGGAGCTCTGCTGTGCACGAGAGATGACCTGA...CACGGAGTCCAGGTGCTTCCCACCCGGTCGCATTCTTTGACATGCAGATTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR GCA 90 bp CAGGATCGGCATCTTTTAAAAATGCACGCAGCAGGCTCTCGGCAGAGGCTGGACCTGCATGTCAAAGAATaGGACCGGGTGGGAAGCACC +
Preference number: 4 (lower is better)
Translates to: QDRHLLKMHAAGSRQRLDLHVKE*DRVGST
Trigger: GGTGCTTCCCACCCGGTCGCATTCTTTGACATGCAG...GTCCAGCCTCTGCCGAGAGCCTGCTGCGTGCATTTTTAAAAGATGCCGATCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR CCA 90 bp CCGTGGCTCCTGCCGTCACACTCCTCGCCACACAGGCTGTGTCTGAAATGCGCACATCTACAAGGGCCTTaGCTAACCTCACACAGTAAA +
Preference number: 4 (lower is better)
Translates to: PWLLPSHSSPHRLCLKCAHLQGP*LTSHSK
Trigger: TTTACTGTGTGAGGTTAGCCAAGGCCCTTGTAGATG...TGCGCATTTCAGACACAGCCTGTGTGGCGAGGAGTGTGACGGCAGGAGCCACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR CCA 90 bp ACACAGGCTGTGTCTGAAATGCGCAGAGAACAGAGGCTCCCAGGATCGGCATCTACGGAGGTGATGAACTaGCAGCAGAATCTCGGGCTG +
Preference number: 4 (lower is better)
Translates to: TQAVSEMRREQRLPGSASTEVMN*QQNLGL
Trigger: CAGCCCGAGATTCTGCTGCCAGTTCATCACCTCCGT...AGATGCCGATCCTGGGAGCCTCTGTTCTCTGCGCATTTCAGACACAGCCTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR CCA 90 bp GAGATCACCAGCTGGAGGAGGCTGAATTCCAAGCAGAAGCCCCAGGAAGCTGGCTATTATGGGGCAGCCTaGAGCACAAGGTTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: EITSWRRLNSKQKPQEAGYYGAA*STRFSG
Trigger: ACCTGAGAACCTTGTGCTCCAGGCTGCCCCATAATA...GCCAGCTTCCTGGGGCTTCTGCTTGGAATTCAGCCTCCTCCAGCTGGTGATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440409.1
CDS-3UTR CCA 90 bp CTTTTAAAAATGCACGCAGCAGGCTCTCGGCAGAGGCTGGACTCTTCCCTCCACGGAGCCCACTTTTTCTaGCGGGGACACATCGTCTTC +
Preference number: 4 (lower is better)
Translates to: LLKMHAAGSRQRLDSSLHGAHFF*RGHIVF
Trigger: GAAGACGATGTGTCCCCGCCAGAAAAAGTGGGCTCC...GTGGAGGGAAGAGTCCAGCCTCTGCCGAGAGCCTGCTGCGTGCATTTTTAAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR CCA 90 bp GGCAGAGGCTGGACTCTTCCCTCCACCATCCAATCTGCATGTCAAAGAATGCGAGCCGAACAGAGTCCTTaGTTTGCTCCTTGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: GRGWTLPSTIQSACQRMRAEQSP*FAPWAA
Trigger: CGCAGCCCAAGGAGCAAACCAAGGACTCTGTTCGGC...TCGCATTCTTTGACATGCAGATTGGATGGTGGAGGGAAGAGTCCAGCCTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359073.9
CDS-3UTR TCA 90 bp AGGCTGGACTCTTCCCTCCACCATCCAATCTGCATGTCAAAGAATGCGACCGGGATCTCGGGCTGGCACTaGATATCTGCTTCAGCGTCT +
Preference number: 4 (lower is better)
Translates to: RLDSSLHHPICMSKNATGISGWH*ISASAS
Trigger: AGACGCTGAAGCAGATATTCAGTGCCAGCCCGAGAT...CCCGGTCGCATTCTTTGACATGCAGATTGGATGGTGGAGGGAAGAGTCCAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR TCA 90 bp AAAACTGAGAAGTTCCTTTCCGAGGTGAGGGGAATTCCTGACAGCCTCCCTGAGCATCCGCCAACCTGTTaGTCTCCTCTACCAGCGGGA +
Preference number: 4 (lower is better)
Translates to: KTEKFLSEVRGIPDSLPEHPPTC*SPLPAG
Trigger: TCCCGCTGGTAGAGGAGATCAACAGGTTGGCGGATG...CTCAGGGAGGCTGTCAGGAATTCCCCTCACCTCGGAAAGGAACTTCTCAGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR TCA 90 bp AGAAGGAGCCCACTTTTTCTGGCGGGGACACATCGTCTTCACGAGGAAAGAGGCCACACAGGCTGTGTCTaGAATGCGCAGAGAACAGAG +
Preference number: 4 (lower is better)
Translates to: RRSPLFLAGTHRLHEERGHTGCV*NAQRTE
Trigger: CTCTGTTCTCTGCGCATTTCAGACACAGCCTGTGTG...GCCTCTTTCCTCGTGAAGACGATGTGTCCCCGCCAGAAAAAGTGGGCTCCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR GCA 90 bp ACACAGGCTGTGTCTGAAATGCGCAGAGAACAGAGGCTCCCAGGATCGGCATCTTTTATAAGCCAGGGGTaGCTTCACGCACCAGCGGAT +
Preference number: 4 (lower is better)
Translates to: TQAVSEMRREQRLPGSASFISQG*LHAPAD
Trigger: ATCCGCTGGTGCGTGAAGGCACCCCTGGCTTATAAA...AGATGCCGATCCTGGGAGCCTCTGTTCTCTGCGCATTTCAGACACAGCCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344417.10
CDS-3UTR GCA 90 bp CTCTCGGCAGAGGCTGGACTCTTCCCTCCACCATCCAATCTGCATGTCAAAGAACTGCATGTCAAAGAATaGGACCGGGTGGGAAGCACC +
Preference number: 4 (lower is better)
Translates to: LSAEAGLFPPPSNLHVKELHVKE*DRVGST
Trigger: GGTGCTTCCCACCCGGTCGCATTCTTTGACATGCAG...TTCTTTGACATGCAGATTGGATGGTGGAGGGAAGAGTCCAGCCTCTGCCGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR GCA 90 bp TTTAAAAATGCACGCAGCAGGCTCTCGGCAGAGGCTGGACTCTTCCCTCCACCAAGGCTGTGTCTGAAATaGGCAGAGAACAGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: FKNARSRLSAEAGLFPPPRLCLK*AENRGS
Trigger: GGAGCCTCTGTTCTCTGCGCATTTCAGACACAGCCT...TGGTGGAGGGAAGAGTCCAGCCTCTGCCGAGAGCCTGCTGCGTGCATTTTTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR GCA 90 bp GGCAGAGGCTGGACTCTTCCCTCCACCATCCAATCTGCATGTCAAAGAATGCGACTCAGCTCACGGGGCTaGAGAAGGAGCCCACTTTTT +
Preference number: 4 (lower is better)
Translates to: GRGWTLPSTIQSACQRMRLSSRG*RRSPLF
Trigger: AAAAAGTGGGCTCCTTCTGCAGCCCCGTGAGCTGAG...TCGCATTCTTTGACATGCAGATTGGATGGTGGAGGGAAGAGTCCAGCCTCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR CCA 90 bp CCCGAGGTTCTCTTCTGGGAGTCCGGCCACCCCTTCCATCTCGAAAGGCTTCGTCATCTACAAGGGCCTTaGCTAACCTCACACAGTAAA +
Preference number: 4 (lower is better)
Translates to: PEVLFWESGHPFHLERLRHLQGP*LTSHSK
Trigger: TTTACTGTGTGAGGTTAGCCAAGGCCCTTGTAGATG...ACGAAGCCTTTCGAGATGGAAGGGGTGGCCGGACTCCCAGAAGAGAACCTCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR TCA 90 bp AGCCCACTTTTTCTGGCGGGGACACATCGTCTTCACGAGGAAAGAGGCCAGACATCGGCTTTGTTCCCTTaGGGGCTGAAAAGGGATGAA +
Preference number: 4 (lower is better)
Translates to: SPLFLAGTHRLHEERGQTSALFP*GLKRDE
Trigger: TTCATCCCTTTTCAGCCCTCAAGGGAACAAAGCCGA...TGTCTGGCCTCTTTCCTCGTGAAGACGATGTGTCCCCGCCAGAAAAAGTGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR TCA 90 bp GAGATCACCAGCTGGAGGAGGCTGAATTCCAAGCAGAAGCCCCAGGAAGCTGGCTGGCAAGGAGTAGGATaGGAAATTCACAAACACCAC +
Preference number: 4 (lower is better)
Translates to: EITSWRRLNSKQKPQEAGWQGVG*EIHKHH
Trigger: GTGGTGTTTGTGAATTTCTCATCCTACTCCTTGCCA...GCCAGCTTCCTGGGGCTTCTGCTTGGAATTCAGCCTCCTCCAGCTGGTGATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440409.1
CDS-3UTR CCA 90 bp GGCAGAGGCTGGACTCTTCCCTCCACCATCCAATCTGCATGTCAAAGAATGCGAACACAGCCACCGCCATaGAGACCAGTTTTCCCAACA +
Preference number: 4 (lower is better)
Translates to: GRGWTLPSTIQSACQRMRTQPPP*RPVFPT
Trigger: TGTTGGGAAAACTGGTCTCCATGGCGGTGGCTGTGT...TCGCATTCTTTGACATGCAGATTGGATGGTGGAGGGAAGAGTCCAGCCTCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR CCA 90 bp GAGAACAGAGGCTCCCAGGATCGGCATCTTTTAAAAATGCACGCAGCAGGCTCTGCTTCAGCGTCTGAATaGATCCCGGCACCAAACAGC +
Preference number: 4 (lower is better)
Translates to: ENRGSQDRHLLKMHAAGSASASE*IPAPNS
Trigger: GCTGTTTGGTGCCGGGATCCATTCAGACGCTGAAGC...AGAGCCTGCTGCGTGCATTTTTAAAAGATGCCGATCCTGGGAGCCTCTGTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR TCA 90 bp GGCAGAGGCTGGACTCTTCCCTCCACCATCCAATCTGCATGTCAAAGAATGCGAATCCAACGAGCGGGGTaGGCTCTAAGAATCCTATTG +
Preference number: 4 (lower is better)
Translates to: GRGWTLPSTIQSACQRMRIQRAG*ALRILL
Trigger: CAATAGGATTCTTAGAGCTCACCCCGCTCGTTGGAT...TCGCATTCTTTGACATGCAGATTGGATGGTGGAGGGAAGAGTCCAGCCTCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344417.10
CDS-3UTR CCA 90 bp CCCAATAAAACTGAGAAGTTCCTTTCCGAGGTGAGGGGAATTCCTGACAGCCTCGGAGCCCACTTTTTCTaGCGGGGACACATCGTCTTC +
Preference number: 4 (lower is better)
Translates to: PNKTEKFLSEVRGIPDSLGAHFF*RGHIVF
Trigger: GAAGACGATGTGTCCCCGCCAGAAAAAGTGGGCTCC...GAGGCTGTCAGGAATTCCCCTCACCTCGGAAAGGAACTTCTCAGTTTTATTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR GCA 90 bp AATAAAACTGAGAAGTTCCTTTCCGAGGTGAGGGGAATTCCTGACAGCCTCCCTTCAGGTCATCTCTCGTaGACAGCAGAGCTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: NKTEKFLSEVRGIPDSLPSGHLS*TAELLR
Trigger: CCTCAGGAGCTCTGCTGTGCACGAGAGATGACCTGA...AGGGAGGCTGTCAGGAATTCCCCTCACCTCGGAAAGGAACTTCTCAGTTTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR CCA 90 bp GAACAGAGGCTCCCAGGATCGGCATCTTTTAAAAATGCACGCAGCAGGCTCTCGGCCGAACAGAGTCCTTaGTTTGCTCCTGGAAATAAT +
Preference number: 4 (lower is better)
Translates to: EQRLPGSASFKNARSRLSAEQSP*FAPGNN
Trigger: ATTATTTCCAGGAGCAAACCAAGGACTCTGTTCGGC...CGAGAGCCTGCTGCGTGCATTTTTAAAAGATGCCGATCCTGGGAGCCTCTGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344417.10
CDS-3UTR CCA 90 bp AGCCCACTTTTTCTGGCGGGGACACATCGTCTTCACGAGGAAAGAGGCCAGACAATCCTATTGGCAGATTaGCCGCAATCGGAGTATTTA +
Preference number: 4 (lower is better)
Translates to: SPLFLAGTHRLHEERGQTILLAD*PQSEYL
Trigger: TAAATACTCCGATTGCGGCCAATCTGCCAATAGGAT...TGTCTGGCCTCTTTCCTCGTGAAGACGATGTGTCCCCGCCAGAAAAAGTGGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344417.10
CDS-3UTR TCA 90 bp AATAAAACTGAGAAGTTCCTTTCCGAGGTGAGGGGAATTCCTGACAGCCTCCCTTCGGCTTTGTTCCCTTaGGGGCTGAAAAGGGATGAA +
Preference number: 4 (lower is better)
Translates to: NKTEKFLSEVRGIPDSLPSALFP*GLKRDE
Trigger: TTCATCCCTTTTCAGCCCTCAAGGGAACAAAGCCGA...AGGGAGGCTGTCAGGAATTCCCCTCACCTCGGAAAGGAACTTCTCAGTTTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR TCA 90 bp GCAGAAGGAGCCCACTTTTTCTGGCGGGGACACATCGTCTTCACGAGGAAAGAGCCTCAAAAATCCAGGTaGCAATCATTTCAAGCAAGT +
Preference number: 4 (lower is better)
Translates to: AEGAHFFWRGHIVFTRKEPQKSR*QSFQAS
Trigger: ACTTGCTTGAAATGATTGTCACCTGGATTTTTGAGG...CTCTTTCCTCGTGAAGACGATGTGTCCCCGCCAGAAAAAGTGGGCTCCTTCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS GCA 90 bp GGCCCCCGCGCCGAGCGCGTCTCACTTCCGCCCGGGGCCCGGGACTaGGCCGCTACCCGTGGAAACAAAGAGGCGCGACCCGGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: GPRAERVSLPPGARD*AATRGNKEARPGPG
Trigger: CCCAGGCCCGGGTCGCGCCTCTTTGTTTCCACGGGTAGCGGCGCAGTCCCGGGCCCCGGGCGGAAGTGAGACGCGCTCGGCGCGGGGGCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS CCA 90 bp GCGCGTCTCACTTCCGCCCGGGGCCCGGGACTGCGCCGCTACCCGTaGAAACAAAGAGGCGCGACCCGGGCCTGGGCTGCGGCACCCGCC +
Preference number: 5 (lower is better)
Translates to: ARLTSARGPGLRRYP*KQRGATRAWAAAPA
Trigger: GGCGGGTGCCGCAGCCCAGGCCCGGGTCGCGCCTCTTTGTTTCCACGGGTAGCGGCGCAGTCCCGGGCCCCGGGCGGAAGTGAGACGCGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR CAA 90 bp GCCTGTGGCCCACGGAGCTCCGGCCGTAGCACTCCCGGGCGCGCAGCCCACACACAGCGTCATGAGCACTaGCAGGACGCTGAGGTGGAG +
Preference number: 5 (lower is better)
Translates to: ACGPRSSGRSTPGRAAHTQRHEH*QDAEVE
Trigger: CTCCACCTCAGCGTCCTGCAAGTGCTCATGACGCTG...TGTGTGGGCTGCGCGCCCGGGAGTGCTACGGCCGGAGCTCCGTGGGCCACAGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445375.5
CDS-3UTR CAA 90 bp GGAGCTCCGGCCGTAGCACTCCCGGGCGCGCAGCCCACACAGGTGGCCTCCACGTCATCCGCCAACCTGTaGATCTCCTCTACCAGCGGG +
Preference number: 5 (lower is better)
Translates to: GAPAVALPGAQPTQVASTSSANL*ISSTSG
Trigger: CCCGCTGGTAGAGGAGATCAACAGGTTGGCGGATGA...CGTGGAGGCCACCTGTGTGGGCTGCGCGCCCGGGAGTGCTACGGCCGGAGCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445375.5
CDS-3UTR CAA 90 bp CCCACAGGCGAGGATGCGTGGGAGTGGGCTCTGCACGGGGCCTGTGGCCCACGGATCTCCTGGGAGGCGTaGAGGGGGTTCAGTTCATCC +
Preference number: 5 (lower is better)
Translates to: PTGEDAWEWALHGACGPRISWEA*RGFSSS
Trigger: GGATGAACTGAACCCCCTCAACGCCTCCCAGGAGAT...CCGTGGGCCACAGGCCCCGTGCAGAGCCCACTCCCACGCATCCTCGCCTGTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445375.5
CDS-3UTR CAA 90 bp GGGAGTGGGCTCTGCACGGGGCCTGTGGCCCACGGAGCTCCGGCCGTAGCACTCCCCAGGAAGCTGGCCTaGCAAACGACCCCGAAATTC +
Preference number: 5 (lower is better)
Translates to: GSGLCTGPVAHGAPAVALPRKLA*QTTPKF
Trigger: GAATTTCGGGGTCGTTTGCAAGGCCAGCTTCCTGGG...GAGTGCTACGGCCGGAGCTCCGTGGGCCACAGGCCCCGTGCAGAGCCCACTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000445375.5
CDS-3UTR CAA 90 bp GGAGCTCCGGCCGTAGCACTCCCGGGCGCGCAGCCCACACAGGTGGCCTCCACGGGGTCCTTTGTGACCTaGTTGCTGACATGGCCATTG +
Preference number: 5 (lower is better)
Translates to: GAPAVALPGAQPTQVASTGSFVT*LLTWPL
Trigger: CAATGGCCATGTCAGCAACAAGGTCACAAAGGACCC...CGTGGAGGCCACCTGTGTGGGCTGCGCGCCCGGGAGTGCTACGGCCGGAGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445375.5
CDS GCA 90 bp AGGTCATCTCTCGTGCACAGCAGAGCTCCTGAGGCCATGGCCACCTaGAGAGCCTGCGCCAGCCGGTCCAGCGAGAGCTCAATCTCCTGG +
Preference number: 5 (lower is better)
Translates to: RSSLVHSRAPEAMAT*RACASRSSESSISW
Trigger: CCAGGAGATTGAGCTCTCGCTGGACCGGCTGGCGCAGGCTCTGCAGGTGGCCATGGCCTCAGGAGCTCTGCTGTGCACGAGAGATGACCT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344417.10
ENST00000359073.9
ENST00000440409.1
ENST00000445375.5
ENST00000472693.1
ENST00000477298.1
CDS CCA 90 bp GCTCCTGAAGGGAATTCAGTCTCTTGGGCTGCGCGCTGCGCTCCTTaGGCACCTGGAACACGAACTCCTCCAGCAGCTCCACGGGGCCCT +
Preference number: 5 (lower is better)
Translates to: APEGNSVSWAARCAP*APGTRTPPAAPRGP
Trigger: AGGGCCCCGTGGAGCTGCTGGAGGAGTTCGTGTTCCAGGTGCCCAAGGAGCGCAGCGCGCAGCCCAAGAGACTGAATTCCCTTCAGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344417.10
CDS CCA 90 bp GAACAGAGTCCTTGGTTTGCTCCTTGGGCTGCGCGCTGCGCTCCTTaGGCACCTGGAACACGAACTCCTCCAGCAGCTCCACGGGGCCCT +
Preference number: 5 (lower is better)
Translates to: EQSPWFAPWAARCAP*APGTRTPPAAPRGP
Trigger: AGGGCCCCGTGGAGCTGCTGGAGGAGTTCGTGTTCCAGGTGCCCAAGGAGCGCAGCGCGCAGCCCAAGGAGCAAACCAAGGACTCTGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359073.9
CDS-3UTR CAA 90 bp TCCGGCCACCCCTTCCATCTCGAAAGGCTTCGTCCAGCGAGAGCGCAGAAGGCATGGTACAACACCTCCTaGGCGGCGCTCAGCGCATCG +
Preference number: 5 (lower is better)
Translates to: SGHPFHLERLRPARAQKAWYNTS*AALSAS
Trigger: CGATGCGCTGAGCGCCGCCAAGGAGGTGTTGTACCA...TGCCTTCTGCGCTCTCGCTGGACGAAGCCTTTCGAGATGGAAGGGGTGGCCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR CAA 90 bp TTTTTCTGGCGGGGACACATCGTCTTCACGAGGAAAGAGGCCAGACACACGGGCGCCAGACACACGGGCTaGCACCCGTGGCTCCTGCCG +
Preference number: 5 (lower is better)
Translates to: FFWRGHIVFTRKEARHTGARHTG*HPWLLP
Trigger: CGGCAGGAGCCACGGGTGCAAGCCCGTGTGTCTGGC...GCCCGTGTGTCTGGCCTCTTTCCTCGTGAAGACGATGTGTCCCCGCCAGAAAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR CAA 90 bp AGCCCACTTTTTCTGGCGGGGACACATCGTCTTCACGAGGAAAGAGGCCAGACAGCCAGACACACGGGCTaGCACCCGTGGCTCCTGCCG +
Preference number: 5 (lower is better)
Translates to: SPLFLAGTHRLHEERGQTARHTG*HPWLLP
Trigger: CGGCAGGAGCCACGGGTGCAAGCCCGTGTGTCTGGC...TGTCTGGCCTCTTTCCTCGTGAAGACGATGTGTCCCCGCCAGAAAAAGTGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR CAA 90 bp TCCGGCCACCCCTTCCATCTCGAAAGGCTTCGTCCAGCGAGAGCGCAGAAGGCATCATCCGCCAACCTGTaGATCTCCTCTACCAGCGGG +
Preference number: 5 (lower is better)
Translates to: SGHPFHLERLRPARAQKASSANL*ISSTSG
Trigger: CCCGCTGGTAGAGGAGATCAACAGGTTGGCGGATGA...TGCCTTCTGCGCTCTCGCTGGACGAAGCCTTTCGAGATGGAAGGGGTGGCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS TCA 90 bp CAGCTGCAGCGTCATGAGCACTTGCAGGACGCTGAGGTGGAGTTTTaGGTACAAGAGGTGGGAGTCTCTGTCCATCCCCACGCCCGGGTC +
Preference number: 5 (lower is better)
Translates to: QLQRHEHLQDAEVEF*VQEVGVSVHPHARV
Trigger: GACCCGGGCGTGGGGATGGACAGAGACTCCCACCTCTTGTACTCAAAACTCCACCTCAGCGTCCTGCAAGTGCTCATGACGCTGCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344417.10
ENST00000445375.5
ENST00000472693.1
ENST00000477298.1
CDS-3UTR CAA 90 bp TGGGAAGCACCTGGACTCCGTGACACCAAGACGGTTCTGCCGGCGGGGAGGGGCTCCTTTGTGACCTTGTaGCTGACATGGCCATTGGAT +
Preference number: 5 (lower is better)
Translates to: WEAPGLRDTKTVLPAGRGSFVTL*LTWPLD
Trigger: ATCCAATGGCCATGTCAGCAACAAGGTCACAAAGGA...GCCCCTCCCCGCCGGCAGAACCGTCTTGGTGTCACGGAGTCCAGGTGCTTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344417.10
CDS-3UTR CAA 90 bp CCCGAGGTTCTCTTCTGGGAGTCCGGCCACCCCTTCCATCTCGAAAGGCTTCGTTCATCCGCCAACCTGTaGATCTCCTCTACCAGCGGG +
Preference number: 5 (lower is better)
Translates to: PEVLFWESGHPFHLERLRSSANL*ISSTSG
Trigger: CCCGCTGGTAGAGGAGATCAACAGGTTGGCGGATGA...ACGAAGCCTTTCGAGATGGAAGGGGTGGCCGGACTCCCAGAAGAGAACCTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR CAA 90 bp TGCACGGGACCCGAGATCACCAGCTGGAGGAGGCTGAATTCCAAGCAGAAGCCCTCATCCGCCAACCTGTaGATCTCCTCTACCAGCGGG +
Preference number: 5 (lower is better)
Translates to: CTGPEITSWRRLNSKQKPSSANL*ISSTSG
Trigger: CCCGCTGGTAGAGGAGATCAACAGGTTGGCGGATGA...GGGCTTCTGCTTGGAATTCAGCCTCCTCCAGCTGGTGATCTCGGGTCCCGTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440409.1
CDS-3UTR CAA 90 bp TGCACGGGACCCGAGATCACCAGCTGGAGGAGGCTGAATTCCAAGCAGAAGCCCCCCAGGAAGCTGGCCTaGCAAACGACCCCGAAATTC +
Preference number: 5 (lower is better)
Translates to: CTGPEITSWRRLNSKQKPPRKLA*QTTPKF
Trigger: GAATTTCGGGGTCGTTTGCAAGGCCAGCTTCCTGGG...GGGCTTCTGCTTGGAATTCAGCCTCCTCCAGCTGGTGATCTCGGGTCCCGTGCA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000440409.1
CDS GCA 90 bp GAAGTTGAAGCTCCTGAAGGGAATTCAGTCTCTTGGGCTGCGCGCTaGGCTCCTTGGGCACCTGGAACACGAACTCCTCCAGCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: EVEAPEGNSVSWAAR*APWAPGTRTPPAAP
Trigger: TGGAGCTGCTGGAGGAGTTCGTGTTCCAGGTGCCCAAGGAGCGCAGCGCGCAGCCCAAGAGACTGAATTCCCTTCAGGAGCTTCAACTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344417.10
CDS GCA 90 bp AAGAGGATCAGCCCCAGGCGCCCATACAGATTCTTCTCGGTCAGGTaGAGCTGCAGCGTCATGAGCACTTGCAGGACGCTGAGGTGGAGT +
Preference number: 5 (lower is better)
Translates to: KRISPRRPYRFFSVR*SCSVMSTCRTLRWS
Trigger: ACTCCACCTCAGCGTCCTGCAAGTGCTCATGACGCTGCAGCTGCACCTGACCGAGAAGAATCTGTATGGGCGCCTGGGGCTGATCCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344417.10
ENST00000445375.5
ENST00000472693.1
ENST00000477298.1
CDS GCA 90 bp AAGAGGATCAGCCCCAGGCGCCCATACAGATTCTTCTCGGTCAGGTaGAGCTGCAGCGTCATGAGCACTTGCAGGACGCTTGGGTCCTCA +
Preference number: 5 (lower is better)
Translates to: KRISPRRPYRFFSVR*SCSVMSTCRTLGSS
Trigger: TGAGGACCCAAGCGTCCTGCAAGTGCTCATGACGCTGCAGCTGCACCTGACCGAGAAGAATCTGTATGGGCGCCTGGGGCTGATCCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359073.9
CDS-3UTR CAA 90 bp ATCCAATCTGCATGTCAAAGAATGCGACCGGGTGGGAAGCACCTGGACTCCGTGTGGTACAACACCTCCTaGGCGGCGCTCAGCGCATCG +
Preference number: 5 (lower is better)
Translates to: IQSACQRMRPGGKHLDSVWYNTS*AALSAS
Trigger: CGATGCGCTGAGCGCCGCCAAGGAGGTGTTGTACCA...CACGGAGTCCAGGTGCTTCCCACCCGGTCGCATTCTTTGACATGCAGATTGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR CAA 90 bp GAGATCACCAGCTGGAGGAGGCTGAATTCCAAGCAGAAGCCCCAGGAAGCTGGCATCTCCTGGGAGGCGTaGAGGGGGTTCAGTTCATCC +
Preference number: 5 (lower is better)
Translates to: EITSWRRLNSKQKPQEAGISWEA*RGFSSS
Trigger: GGATGAACTGAACCCCCTCAACGCCTCCCAGGAGAT...GCCAGCTTCCTGGGGCTTCTGCTTGGAATTCAGCCTCCTCCAGCTGGTGATCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440409.1
CDS-3UTR CAA 90 bp TTCCATCTCGAAAGGCTTCGTCCAGCGAGAGCGCAGAAGGCACACACGGGCCAGGTGCTGCACATAAGCTaGTGGTCACTACGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: FHLERLRPARAQKAHTGQVLHIS*WSLRSL
Trigger: CAGGCTGCGTAGTGACCACAAGCTTATGTGCAGCAC...CTGGCCCGTGTGTGCCTTCTGCGCTCTCGCTGGACGAAGCCTTTCGAGATGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS GCA 90 bp ATCAGCCCCAGGCGCCCATACAGATTCTTCTCGGTCAGGTGCAGCTaGAGCGTCATGAGCACTTGCAGGACGCTGAGGTGGAGTTTTGAG +
Preference number: 5 (lower is better)
Translates to: ISPRRPYRFFSVRCS*SVMSTCRTLRWSFE
Trigger: CTCAAAACTCCACCTCAGCGTCCTGCAAGTGCTCATGACGCTGCAGCTGCACCTGACCGAGAAGAATCTGTATGGGCGCCTGGGGCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344417.10
ENST00000445375.5
ENST00000472693.1
ENST00000477298.1
CDS CCA 90 bp AGGCAGCACACTCCAACACCGGGATTCGACACACAGCCACCGCCATaGAGACCAGTTTTCCCAACAAGCTCATCCGGCTGTCATCGGCTT +
Preference number: 5 (lower is better)
Translates to: RQHTPTPGFDTQPPP*RPVFPTSSSGCHRL
Trigger: AAGCCGATGACAGCCGGATGAGCTTGTTGGGAAAACTGGTCTCCATGGCGGTGGCTGTGTGTCGAATCCCGGTGTTGGAGTGTGCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344417.10
ENST00000359073.9
ENST00000472693.1
CDS CCA 90 bp GTCAGGTGCAGCTGCAGCGTCATGAGCACTTGCAGGACGCTGAGGTaGAGTTTTGAGTACAAGAGGTGGGAGTCTCTGTCCATCCCCACG +
Preference number: 5 (lower is better)
Translates to: VRCSCSVMSTCRTLR*SFEYKRWESLSIPT
Trigger: CGTGGGGATGGACAGAGACTCCCACCTCTTGTACTCAAAACTCCACCTCAGCGTCCTGCAAGTGCTCATGACGCTGCAGCTGCACCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344417.10
ENST00000445375.5
ENST00000472693.1
ENST00000477298.1
CDS TCA 90 bp CCAGGGGTGCCTTCACGCACCAGCGGATCAATCCAACGAGCGGGGTaGGCTCTAAGAATCCTATTGGCAGATTGGCCGCAATCGGAGTAT +
Preference number: 5 (lower is better)
Translates to: PGVPSRTSGSIQRAG*ALRILLADWPQSEY
Trigger: ATACTCCGATTGCGGCCAATCTGCCAATAGGATTCTTAGAGCTCACCCCGCTCGTTGGATTGATCCGCTGGTGCGTGAAGGCACCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000472693.1
CDS GCA 90 bp ATCAGCCCCAGGCGCCCATACAGATTCTTCTCGGTCAGGTGCAGCTaGAGCGTCATGAGCACTTGCAGGACGCTTGGGTCCTCAAAAATC +
Preference number: 5 (lower is better)
Translates to: ISPRRPYRFFSVRCS*SVMSTCRTLGSSKI
Trigger: GATTTTTGAGGACCCAAGCGTCCTGCAAGTGCTCATGACGCTGCAGCTGCACCTGACCGAGAAGAATCTGTATGGGCGCCTGGGGCTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359073.9
CDS CCA 90 bp GAATGGATCCCGGCACCAAACAGCAGTAGTCATCTACAAGGGCCTTaGCTAACCTCACACAGTAAACCACGGGCGTCCGCTGAAGCCAGG +
Preference number: 5 (lower is better)
Translates to: EWIPAPNSSSHLQGP*LTSHSKPRASAEAR
Trigger: CCTGGCTTCAGCGGACGCCCGTGGTTTACTGTGTGAGGTTAGCCAAGGCCCTTGTAGATGACTACTGCTGTTTGGTGCCGGGATCCATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR CAA 90 bp GCAGAAGGAGCCCACTTTTTCTGGCGGGGACACATCGTCTTCACGAGGAAAGAGATCTCCTGGGAGGCGTaGAGGGGGTTCAGTTCATCC +
Preference number: 5 (lower is better)
Translates to: AEGAHFFWRGHIVFTRKEISWEA*RGFSSS
Trigger: GGATGAACTGAACCCCCTCAACGCCTCCCAGGAGAT...CTCTTTCCTCGTGAAGACGATGTGTCCCCGCCAGAAAAAGTGGGCTCCTTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR CAA 90 bp CAGGATCGGCATCTTTTAAAAATGCACGCAGCAGGCTCTCGGCAGAGGCTGGACAACAGAGTCCTTGGTTaGCTCCTTGGGCTGCGCGCT +
Preference number: 5 (lower is better)
Translates to: QDRHLLKMHAAGSRQRLDNRVLG*LLGLRA
Trigger: AGCGCGCAGCCCAAGGAGCAAACCAAGGACTCTGTT...GTCCAGCCTCTGCCGAGAGCCTGCTGCGTGCATTTTTAAAAGATGCCGATCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359073.9
CDS CCA 90 bp CACCACTGGGTCTCATCCTCACTACCGTCTTATTATGGGGCAGCCTaGAGCACAAGGTTCTCAGGTCATCTCTCGTGCACAGCAGAGCTC +
Preference number: 5 (lower is better)
Translates to: HHWVSSSLPSYYGAA*STRFSGHLSCTAEL
Trigger: GAGCTCTGCTGTGCACGAGAGATGACCTGAGAACCTTGTGCTCCAGGCTGCCCCATAATAAGACGGTAGTGAGGATGAGACCCAGTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440409.1
CDS-3UTR CAA 90 bp AAAACTGAGAAGTTCCTTTCCGAGGTGAGGGGAATTCCTGACAGCCTCCCTGAGCAGCGTCATGAGCACTaGCAGGACGCTGAGGTGGAG +
Preference number: 5 (lower is better)
Translates to: KTEKFLSEVRGIPDSLPEQRHEH*QDAEVE
Trigger: CTCCACCTCAGCGTCCTGCAAGTGCTCATGACGCTG...CTCAGGGAGGCTGTCAGGAATTCCCCTCACCTCGGAAAGGAACTTCTCAGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344417.10
CDS-3UTR CAA 90 bp CTCTCGGCAGAGGCTGGACTCTTCCCTCCACCATCCAATCTGCATGTCAAAGAAATCTCCTGGGAGGCGTaGAGGGGGTTCAGTTCATCC +
Preference number: 5 (lower is better)
Translates to: LSAEAGLFPPPSNLHVKEISWEA*RGFSSS
Trigger: GGATGAACTGAACCCCCTCAACGCCTCCCAGGAGAT...TTCTTTGACATGCAGATTGGATGGTGGAGGGAAGAGTCCAGCCTCTGCCGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR CAA 90 bp CACCATCCAATCTGCATGTCAAAGAATGCGACCGGGTGGGAAGCACCTGGACTCGTGCTGCACATAAGCTaGTGGTCACTACGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: HHPICMSKNATGWEAPGLVLHIS*WSLRSL
Trigger: CAGGCTGCGTAGTGACCACAAGCTTATGTGCAGCAC...GAGTCCAGGTGCTTCCCACCCGGTCGCATTCTTTGACATGCAGATTGGATGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS-3UTR CAA 90 bp GAACAGAGGCTCCCAGGATCGGCATCTTTTAAAAATGCACGCAGCAGGCTCTCGTGCCGAACAGAGTCCTaGGTTTGCTCCTTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: EQRLPGSASFKNARSRLSCRTES*VCSLGC
Trigger: GCAGCCCAAGGAGCAAACCAAGGACTCTGTTCGGCA...CGAGAGCCTGCTGCGTGCATTTTTAAAAGATGCCGATCCTGGGAGCCTCTGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359073.9
CDS-3UTR CAA 90 bp AGAAGGAGCCCACTTTTTCTGGCGGGGACACATCGTCTTCACGAGGAAAGAGGCGCACTTGCAGGACGCTaGGGTCCTCAAAAATCCAGG +
Preference number: 5 (lower is better)
Translates to: RRSPLFLAGTHRLHEERGALAGR*GPQKSR
Trigger: CCTGGATTTTTGAGGACCCAAGCGTCCTGCAAGTGC...GCCTCTTTCCTCGTGAAGACGATGTGTCCCCGCCAGAAAAAGTGGGCTCCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000359073.9
CDS CCA 90 bp GAATGGATCCCGGCACCAAACAGCAGTAGTCATCTACAAGGGCCTTaGCTAACCTCACACAGTAAACCACGGGCGTCCGCTGGAAAGAAG +
Preference number: 5 (lower is better)
Translates to: EWIPAPNSSSHLQGP*LTSHSKPRASAGKK
Trigger: CTTCTTTCCAGCGGACGCCCGTGGTTTACTGTGTGAGGTTAGCCAAGGCCCTTGTAGATGACTACTGCTGTTTGGTGCCGGGATCCATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472693.1
CDS CCA 90 bp GCCCAGCTAGGAGTCCTGAGGATACTTACTTATTATGGGGCAGCCTaGAGCACAAGGTTCTCAGGTCATCTCTCGTGCACAGCAGAGCTC +
Preference number: 5 (lower is better)
Translates to: AQLGVLRILTYYGAA*STRFSGHLSCTAEL
Trigger: GAGCTCTGCTGTGCACGAGAGATGACCTGAGAACCTTGTGCTCCAGGCTGCCCCATAATAAGTAAGTATCCTCAGGACTCCTAGCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477298.1
CDS CCA 90 bp CAGCAAGCTGGCCCAGCTAGGAGTCCTGAGGATACTTACTTATTATaGGGCAGCCTGGAGCACAAGGTTCTCAGGTCATCTCTCGTGCAC +
Preference number: 5 (lower is better)
Translates to: QQAGPARSPEDTYLL*GSLEHKVLRSSLVH
Trigger: GTGCACGAGAGATGACCTGAGAACCTTGTGCTCCAGGCTGCCCCATAATAAGTAAGTATCCTCAGGACTCCTAGCTGGGCCAGCTTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477298.1
CDS-3UTR CAA 90 bp CACCATCCAATCTGCATGTCAAAGAATGCGACCGGGTGGGAAGCACCTGGACTCGGGTCCTTTGTGACCTaGTTGCTGACATGGCCATTG +
Preference number: 5 (lower is better)
Translates to: HHPICMSKNATGWEAPGLGSFVT*LLTWPL
Trigger: CAATGGCCATGTCAGCAACAAGGTCACAAAGGACCC...GAGTCCAGGTGCTTCCCACCCGGTCGCATTCTTTGACATGCAGATTGGATGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344417.10
CDS-3UTR CAA 90 bp CCCAATAAAACTGAGAAGTTCCTTTCCGAGGTGAGGGGAATTCCTGACAGCCTCCAGCGTCATGAGCACTaGCAGGACGCTTGGGTCCTC +
Preference number: 5 (lower is better)
Translates to: PNKTEKFLSEVRGIPDSLQRHEH*QDAWVL
Trigger: GAGGACCCAAGCGTCCTGCAAGTGCTCATGACGCTG...GAGGCTGTCAGGAATTCCCCTCACCTCGGAAAGGAACTTCTCAGTTTTATTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359073.9
CDS GCA 90 bp TACAGATTCTTCTCGGTCAGGTGCAGCTGCAGCGTCATGAGCACTTaGAGGACGCTGAGGTGGAGTTTTGAGTACAAGAGGTGGGAGTCT +
Preference number: 5 (lower is better)
Translates to: YRFFSVRCSCSVMST*RTLRWSFEYKRWES
Trigger: AGACTCCCACCTCTTGTACTCAAAACTCCACCTCAGCGTCCTGCAAGTGCTCATGACGCTGCAGCTGCACCTGACCGAGAAGAATCTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344417.10
ENST00000445375.5
ENST00000472693.1
ENST00000477298.1
CDS-3UTR CAA 90 bp AGCCCACTTTTTCTGGCGGGGACACATCGTCTTCACGAGGAAAGAGGCCAGACAGCTCTAAGAATCCTATaGGCAGATTGGCCGCAATCG +
Preference number: 5 (lower is better)
Translates to: SPLFLAGTHRLHEERGQTALRIL*ADWPQS
Trigger: CGATTGCGGCCAATCTGCCAATAGGATTCTTAGAGC...TGTCTGGCCTCTTTCCTCGTGAAGACGATGTGTCCCCGCCAGAAAAAGTGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344417.10
CDS GCA 90 bp GAAGCTGGCCTTGCAAACGACCCCGAAATTCAGAGTCCTGATGACTaGGTTTGTGGAGGTCTCCACGTGGCAAGGAGTAGGATGAGAAAT +
Preference number: 5 (lower is better)
Translates to: EAGLANDPEIQSPDD*VCGGLHVARSRMRN
Trigger: ATTTCTCATCCTACTCCTTGCCACGTGGAGACCTCCACAAACGCAGTCATCAGGACTCTGAATTTCGGGGTCGTTTGCAAGGCCAGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440409.1
CDS-3UTR CAA 90 bp TCTGCATGTCAAAGAATGCGACCGGGTGGGAAGCACCTGGACTCCGTGACACCAAATCCTATTGGCAGATaGGCCGCAATCGGAGTATTT +
Preference number: 5 (lower is better)
Translates to: SACQRMRPGGKHLDSVTPNPIGR*AAIGVF
Trigger: AAATACTCCGATTGCGGCCAATCTGCCAATAGGATT...TGGTGTCACGGAGTCCAGGTGCTTCCCACCCGGTCGCATTCTTTGACATGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344417.10
CDS TCA 90 bp CTGATGACTGCGTTTGTGGAGGTCTCCACGTGGCAAGGAGTAGGATaGGAAATTCACAAACACCACTGGGTCTCATCCTCACTACCGTCT +
Preference number: 5 (lower is better)
Translates to: LMTAFVEVSTWQGVG*EIHKHHWVSSSLPS
Trigger: AGACGGTAGTGAGGATGAGACCCAGTGGTGTTTGTGAATTTCTCATCCTACTCCTTGCCACGTGGAGACCTCCACAAACGCAGTCATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440409.1
CDS CCA 90 bp AATTCACAAACACCACTGGGTCTCATCCTCACTACCGTCTTATTATaGGGCAGCCTGGAGCACAAGGTTCTCAGGTCATCTCTCGTGCAC +
Preference number: 5 (lower is better)
Translates to: NSQTPLGLILTTVLL*GSLEHKVLRSSLVH
Trigger: GTGCACGAGAGATGACCTGAGAACCTTGTGCTCCAGGCTGCCCCATAATAAGACGGTAGTGAGGATGAGACCCAGTGGTGTTTGTGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440409.1
CDS TCA 90 bp CATCCGGCTGTCATCGGCTTTGTTCCCTTGAGGGCTGAAAAGGGATaGAAAAATAATCTGCCGAACAGAGTCCTTGGTTTGCTCCTTGGG +
Preference number: 5 (lower is better)
Translates to: HPAVIGFVPLRAEKG*KNNLPNRVLGLLLG
Trigger: CCCAAGGAGCAAACCAAGGACTCTGTTCGGCAGATTATTTTTTCATCCCTTTTCAGCCCTCAAGGGAACAAAGCCGATGACAGCCGGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359073.9
CDS-3UTR CAA 90 bp CCACACAGGCTGTGTCTGAAATGCGCAGAGAACAGAGGCTCCCAGGATCGGCATCATGATTTCAAGAAGTaGAAGCTCCTGAAGGGAATT +
Preference number: 5 (lower is better)
Translates to: PHRLCLKCAENRGSQDRHHDFKK*KLLKGI
Trigger: AATTCCCTTCAGGAGCTTCAACTTCTTGAAATCATG...ATGCCGATCCTGGGAGCCTCTGTTCTCTGCGCATTTCAGACACAGCCTGTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344417.10
CDS TCA 90 bp CATCCGGCTGTCATCGGCTTTGTTCCCTTGAGGGCTGAAAAGGGATaGAAAAATAATCTGCCGAACAGAGTCCTTGGTTTGCTCCTGGAA +
Preference number: 5 (lower is better)
Translates to: HPAVIGFVPLRAEKG*KNNLPNRVLGLLLE
Trigger: TTCCAGGAGCAAACCAAGGACTCTGTTCGGCAGATTATTTTTTCATCCCTTTTCAGCCCTCAAGGGAACAAAGCCGATGACAGCCGGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344417.10
CDS TCA 90 bp TCTGCCGAACAGAGTCCTTGGTTTGCTCCTGGAAATAATTGCACATaGTTTCAAGAAGTTGAAGCTCCTGAAGGGAATTCAGTCTCTTGG +
Preference number: 5 (lower is better)
Translates to: SAEQSPWFAPGNNCT*FQEVEAPEGNSVSW
Trigger: CCAAGAGACTGAATTCCCTTCAGGAGCTTCAACTTCTTGAAATCATGTGCAATTATTTCCAGGAGCAAACCAAGGACTCTGTTCGGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344417.10
CDS GCA 72 bp CGCCTGCTCCCTGCCTGCTCAGGGGGCCATCGCTGCTaGCGCCGGCCAGCAGGCGCCCGAAGGTCCGACTGC +
Preference number: 6 (lower is better)
Translates to: RLLPACSGGHRC*RRPAGARRSDC
Trigger: GCAGTCGGACCTTCGGGCGCCTGCTGGCCGGCGGCAGCAGCGATGGCCCCCTGAGCAGGCAGGGAGCAGGCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344417.10
CDS CCA 72 bp CGCTACCCGTGGAAACAAAGAGGCGCGACCCGGGCCTaGGCTGCGGCACCCGCCCGCTTGCCCGCCTGCCGC +
Preference number: 6 (lower is better)
Translates to: RYPWKQRGATRA*AAAPARLPACR
Trigger: GCGGCAGGCGGGCAAGCGGGCGGGTGCCGCAGCCCAGGCCCGGGTCGCGCCTCTTTGTTTCCACGGGTAGCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS CCA 72 bp TTGGCGGCGCTCAGCGCATCGCGGCGCAGCAGCGAGTaGCGGATGTCGCTCATGGTGCGGCCGCCGCGGCCC +
Preference number: 6 (lower is better)
Translates to: LAALSASRRSSE*RMSLMVRPPRP
Trigger: GGGCCGCGGCGGCCGCACCATGAGCGACATCCGCCACTCGCTGCTGCGCCGCGATGCGCTGAGCGCCGCCAA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS CCA 72 bp ACTTCCGCCCGGGGCCCGGGACTGCGCCGCTACCCGTaGAAACAAAGAGGCGCGACCCGGGCCTGGGCTGCG +
Preference number: 6 (lower is better)
Translates to: TSARGPGLRRYP*KQRGATRAWAA
Trigger: CGCAGCCCAGGCCCGGGTCGCGCCTCTTTGTTTCCACGGGTAGCGGCGCAGTCCCGGGCCCCGGGCGGAAGT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS GCA 72 bp GCCGAGCGCGTCTCACTTCCGCCCGGGGCCCGGGACTaGGCCGCTACCCGTGGAAACAAAGAGGCGCGACCC +
Preference number: 6 (lower is better)
Translates to: AERVSLPPGARD*AATRGNKEARP
Trigger: GGGTCGCGCCTCTTTGTTTCCACGGGTAGCGGCGCAGTCCCGGGCCCCGGGCGGAAGTGAGACGCGCTCGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9
CDS CCA 72 bp TGCTCCTTGGGCTGCGCGCTGCGCTCCTTGGGCACCTaGAACACGAACTCCTCCAGCAGCTCCACGGGGCCC +
Preference number: 6 (lower is better)
Translates to: CSLGCALRSLGT*NTNSSSSSTGP
Trigger: GGGCCCCGTGGAGCTGCTGGAGGAGTTCGTGTTCCAGGTGCCCAAGGAGCGCAGCGCGCAGCCCAAGGAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359073.9
CDS CCA 72 bp AGTCTCTTGGGCTGCGCGCTGCGCTCCTTGGGCACCTaGAACACGAACTCCTCCAGCAGCTCCACGGGGCCC +
Preference number: 6 (lower is better)
Translates to: SLLGCALRSLGT*NTNSSSSSTGP
Trigger: GGGCCCCGTGGAGCTGCTGGAGGAGTTCGTGTTCCAGGTGCCCAAGGAGCGCAGCGCGCAGCCCAAGAGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344417.10
CDS CAA 90 bp CGAACAGAGTCCTTGGTTTGCTCCTTGGGCTGCGCGCTGCGCTCCTaGGGCACCTGGAACACGAACTCCTCCAGCAGCTCCACGGGGCCC +
Preference number: 6 (lower is better)
Translates to: RTESLVCSLGCALRS*GTWNTNSSSSSTGP
Trigger: GGGCCCCGTGGAGCTGCTGGAGGAGTTCGTGTTCCAGGTGCCCAAGGAGCGCAGCGCGCAGCCCAAGGAGCAAACCAAGGACTCTGTTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359073.9
CDS CCA 72 bp GCCTGCGCCAGCCGGTCCAGCGAGAGCTCAATCTCCTaGGAGGCGTTGAGGGGGTTCAGTTCATCCGCCAAC +
Preference number: 6 (lower is better)
Translates to: ACASRSSESSIS*EALRGFSSSAN
Trigger: GTTGGCGGATGAACTGAACCCCCTCAACGCCTCCCAGGAGATTGAGCTCTCGCTGGACCGGCTGGCGCAGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344417.10
ENST00000359073.9
ENST00000440409.1
ENST00000445375.5
ENST00000472693.1
ENST00000477298.1
CDS CCA 72 bp CCTTGGTTTGCTCCTTGGGCTGCGCGCTGCGCTCCTTaGGCACCTGGAACACGAACTCCTCCAGCAGCTCCA +
Preference number: 6 (lower is better)
Translates to: PWFAPWAARCAP*APGTRTPPAAP
Trigger: TGGAGCTGCTGGAGGAGTTCGTGTTCCAGGTGCCCAAGGAGCGCAGCGCGCAGCCCAAGGAGCAAACCAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359073.9
CDS CCA 72 bp GGGAATTCAGTCTCTTGGGCTGCGCGCTGCGCTCCTTaGGCACCTGGAACACGAACTCCTCCAGCAGCTCCA +
Preference number: 6 (lower is better)
Translates to: GNSVSWAARCAP*APGTRTPPAAP
Trigger: TGGAGCTGCTGGAGGAGTTCGTGTTCCAGGTGCCCAAGGAGCGCAGCGCGCAGCCCAAGAGACTGAATTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344417.10
CDS GCA 72 bp GCTCCTGAAGGGAATTCAGTCTCTTGGGCTGCGCGCTaGGCTCCTTGGGCACCTGGAACACGAACTCCTCCA +
Preference number: 6 (lower is better)
Translates to: APEGNSVSWAAR*APWAPGTRTPP
Trigger: TGGAGGAGTTCGTGTTCCAGGTGCCCAAGGAGCGCAGCGCGCAGCCCAAGAGACTGAATTCCCTTCAGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344417.10
CDS GCA 72 bp AGCCCCAGGCGCCCATACAGATTCTTCTCGGTCAGGTaGAGCTGCAGCGTCATGAGCACTTGCAGGACGCTG +
Preference number: 6 (lower is better)
Translates to: SPRRPYRFFSVR*SCSVMSTCRTL
Trigger: CAGCGTCCTGCAAGTGCTCATGACGCTGCAGCTGCACCTGACCGAGAAGAATCTGTATGGGCGCCTGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344417.10
ENST00000445375.5
ENST00000472693.1
ENST00000477298.1
CDS GCA 72 bp GAACAGAGTCCTTGGTTTGCTCCTTGGGCTGCGCGCTaGGCTCCTTGGGCACCTGGAACACGAACTCCTCCA +
Preference number: 6 (lower is better)
Translates to: EQSPWFAPWAAR*APWAPGTRTPP
Trigger: TGGAGGAGTTCGTGTTCCAGGTGCCCAAGGAGCGCAGCGCGCAGCCCAAGGAGCAAACCAAGGACTCTGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359073.9
CDS GCA 72 bp ATCTGCCGAACAGAGTCCTTGGTTTGCTCCTTGGGCTaGGCGCTGCGCTCCTTGGGCACCTGGAACACGAAC +
Preference number: 6 (lower is better)
Translates to: ICRTESLVCSLG*ALRSLGTWNTN
Trigger: GTTCGTGTTCCAGGTGCCCAAGGAGCGCAGCGCGCAGCCCAAGGAGCAAACCAAGGACTCTGTTCGGCAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359073.9
CDS GCA 72 bp AGGCGCCCATACAGATTCTTCTCGGTCAGGTGCAGCTaGAGCGTCATGAGCACTTGCAGGACGCTGAGGTGG +
Preference number: 6 (lower is better)
Translates to: RRPYRFFSVRCS*SVMSTCRTLRW
Trigger: CCACCTCAGCGTCCTGCAAGTGCTCATGACGCTGCAGCTGCACCTGACCGAGAAGAATCTGTATGGGCGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344417.10
ENST00000445375.5
ENST00000472693.1
ENST00000477298.1
CDS GCA 72 bp AGGCGCCCATACAGATTCTTCTCGGTCAGGTGCAGCTaGAGCGTCATGAGCACTTGCAGGACGCTTGGGTCC +
Preference number: 6 (lower is better)
Translates to: RRPYRFFSVRCS*SVMSTCRTLGS
Trigger: GGACCCAAGCGTCCTGCAAGTGCTCATGACGCTGCAGCTGCACCTGACCGAGAAGAATCTGTATGGGCGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359073.9
CDS GCA 72 bp AGCCCCAGGCGCCCATACAGATTCTTCTCGGTCAGGTaGAGCTGCAGCGTCATGAGCACTTGCAGGACGCTT +
Preference number: 6 (lower is better)
Translates to: SPRRPYRFFSVR*SCSVMSTCRTL
Trigger: AAGCGTCCTGCAAGTGCTCATGACGCTGCAGCTGCACCTGACCGAGAAGAATCTGTATGGGCGCCTGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359073.9
CDS CAA 90 bp ATCTCCTGGGAGGCGTTGAGGGGGTTCAGTTCATCCGCCAACCTGTaGATCTCCTCTACCAGCGGGACCATGTGGTCGAAGAGGATCAGC +
Preference number: 6 (lower is better)
Translates to: ISWEALRGFSSSANL*ISSTSGTMWSKRIS
Trigger: GCTGATCCTCTTCGACCACATGGTCCCGCTGGTAGAGGAGATCAACAGGTTGGCGGATGAACTGAACCCCCTCAACGCCTCCCAGGAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000344417.10
ENST00000359073.9
ENST00000445375.5
ENST00000472693.1
ENST00000477298.1
CDS CAA 72 bp GAGGCGTTGAGGGGGTTCAGTTCATCCGCCAACCTGTaGATCTCCTCTACCAGCGGGACCATGTGGTCGAAG +
Preference number: 6 (lower is better)
Translates to: EALRGFSSSANL*ISSTSGTMWSK
Trigger: CTTCGACCACATGGTCCCGCTGGTAGAGGAGATCAACAGGTTGGCGGATGAACTGAACCCCCTCAACGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344417.10
ENST00000359073.9
ENST00000440409.1
ENST00000445375.5
ENST00000472693.1
ENST00000477298.1
CDS CCA 72 bp CAAGAAGTTGAAGCTCCTGAAGGGAATTCAGTCTCTTaGGCTGCGCGCTGCGCTCCTTGGGCACCTGGAACA +
Preference number: 6 (lower is better)
Translates to: QEVEAPEGNSVS*AARCAPWAPGT
Trigger: TGTTCCAGGTGCCCAAGGAGCGCAGCGCGCAGCCCAAGAGACTGAATTCCCTTCAGGAGCTTCAACTTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344417.10
CDS CCA 72 bp CCGGCACCAAACAGCAGTAGTCATCTACAAGGGCCTTaGCTAACCTCACACAGTAAACCACGGGCGTCCGCT +
Preference number: 6 (lower is better)
Translates to: PAPNSSSHLQGP*LTSHSKPRASA
Trigger: AGCGGACGCCCGTGGTTTACTGTGTGAGGTTAGCCAAGGCCCTTGTAGATGACTACTGCTGTTTGGTGCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344417.10
ENST00000359073.9
ENST00000472693.1
CDS CAA 72 bp AAAATAATCTGCCGAACAGAGTCCTTGGTTTGCTCCTaGGGCTGCGCGCTGCGCTCCTTGGGCACCTGGAAC +
Preference number: 6 (lower is better)
Translates to: KIICRTESLVCS*GCALRSLGTWN
Trigger: GTTCCAGGTGCCCAAGGAGCGCAGCGCGCAGCCCAAGGAGCAAACCAAGGACTCTGTTCGGCAGATTATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359073.9
CDS TCA 72 bp CCTTCACGCACCAGCGGATCAATCCAACGAGCGGGGTaGGCTCTAAGAATCCTATTGGCAGATTGGCCGCAA +
Preference number: 6 (lower is better)
Translates to: PSRTSGSIQRAG*ALRILLADWPQ
Trigger: TTGCGGCCAATCTGCCAATAGGATTCTTAGAGCTCACCCCGCTCGTTGGATTGATCCGCTGGTGCGTGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000472693.1
CDS TCA 72 bp CGTCATGAGCACTTGCAGGACGCTGAGGTGGAGTTTTaGGTACAAGAGGTGGGAGTCTCTGTCCATCCCCAC +
Preference number: 6 (lower is better)
Translates to: RHEHLQDAEVEF*VQEVGVSVHPH
Trigger: GTGGGGATGGACAGAGACTCCCACCTCTTGTACTCAAAACTCCACCTCAGCGTCCTGCAAGTGCTCATGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344417.10
ENST00000445375.5
ENST00000472693.1
ENST00000477298.1
CDS CCA 72 bp AGCTGCAGCGTCATGAGCACTTGCAGGACGCTGAGGTaGAGTTTTGAGTACAAGAGGTGGGAGTCTCTGTCC +
Preference number: 6 (lower is better)
Translates to: SCSVMSTCRTLR*SFEYKRWESLS
Trigger: GGACAGAGACTCCCACCTCTTGTACTCAAAACTCCACCTCAGCGTCCTGCAAGTGCTCATGACGCTGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344417.10
ENST00000445375.5
ENST00000472693.1
ENST00000477298.1
CDS GCA 72 bp CTTGCAAACGACCCCGAAATTCAGAGTCCTGATGACTaGGTTTGTGGAGGTCTCCACGTGGCAAGGAGTAGG +
Preference number: 6 (lower is better)
Translates to: LANDPEIQSPDD*VCGGLHVARSR
Trigger: CCTACTCCTTGCCACGTGGAGACCTCCACAAACGCAGTCATCAGGACTCTGAATTTCGGGGTCGTTTGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440409.1
CDS CCA 72 bp AGATCACCAGCTGGAGGAGGTTATTATGGGGCAGCCTaGAGCACAAGGTTCTCAGGTCATCTCTCGTGCACA +
Preference number: 6 (lower is better)
Translates to: RSPAGGGYYGAA*STRFSGHLSCT
Trigger: TGTGCACGAGAGATGACCTGAGAACCTTGTGCTCCAGGCTGCCCCATAATAACCTCCTCCAGCTGGTGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344417.10
ENST00000359073.9
ENST00000472693.1
CDS CCA 72 bp CGACCCCGAAATTCAGAGTCTTATTATGGGGCAGCCTaGAGCACAAGGTTCTCAGGTCATCTCTCGTGCACA +
Preference number: 6 (lower is better)
Translates to: RPRNSESYYGAA*STRFSGHLSCT
Trigger: TGTGCACGAGAGATGACCTGAGAACCTTGTGCTCCAGGCTGCCCCATAATAAGACTCTGAATTTCGGGGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445375.5
CDS CCA 72 bp GCCCTACCTGAATTCCAAGCAGAAGCCCCAGGAAGCTaGCCTTGCAAACGACCCCGAAATTCAGAGTCTTAT +
Preference number: 6 (lower is better)
Translates to: ALPEFQAEAPGS*PCKRPRNSESY
Trigger: ATAAGACTCTGAATTTCGGGGTCGTTTGCAAGGCCAGCTTCCTGGGGCTTCTGCTTGGAATTCAGGTAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445375.5
CDS CCA 72 bp GTCTCATCCTCACTACCGTCTTATTATGGGGCAGCCTaGAGCACAAGGTTCTCAGGTCATCTCTCGTGCACA +
Preference number: 6 (lower is better)
Translates to: VSSSLPSYYGAA*STRFSGHLSCT
Trigger: TGTGCACGAGAGATGACCTGAGAACCTTGTGCTCCAGGCTGCCCCATAATAAGACGGTAGTGAGGATGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440409.1
CDS TCA 72 bp GCGTTTGTGGAGGTCTCCACGTGGCAAGGAGTAGGATaGGAAATTCACAAACACCACTGGGTCTCATCCTCA +
Preference number: 6 (lower is better)
Translates to: AFVEVSTWQGVG*EIHKHHWVSSS
Trigger: TGAGGATGAGACCCAGTGGTGTTTGTGAATTTCTCATCCTACTCCTTGCCACGTGGAGACCTCCACAAACGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440409.1
CDS CCA 72 bp GGAGTCCTGAGGATACTTACTTATTATGGGGCAGCCTaGAGCACAAGGTTCTCAGGTCATCTCTCGTGCACA +
Preference number: 6 (lower is better)
Translates to: GVLRILTYYGAA*STRFSGHLSCT
Trigger: TGTGCACGAGAGATGACCTGAGAACCTTGTGCTCCAGGCTGCCCCATAATAAGTAAGTATCCTCAGGACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477298.1
CDS CAA 90 bp GTCCTTGGTTTGCTCCTGGAAATAATTGCACATGATTTCAAGAAGTaGAAGCTCCTGAAGGGAATTCAGTCTCTTGGGCTGCGCGCTGCG +
Preference number: 6 (lower is better)
Translates to: VLGLLLEIIAHDFKK*KLLKGIQSLGLRAA
Trigger: CGCAGCGCGCAGCCCAAGAGACTGAATTCCCTTCAGGAGCTTCAACTTCTTGAAATCATGTGCAATTATTTCCAGGAGCAAACCAAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344417.10
CDS TCA 72 bp GTCATCGGCTTTGTTCCCTTGAGGGCTGAAAAGGGATaGAAAAATAATCTGCCGAACAGAGTCCTTGGTTTG +
Preference number: 6 (lower is better)
Translates to: VIGFVPLRAEKG*KNNLPNRVLGL
Trigger: CAAACCAAGGACTCTGTTCGGCAGATTATTTTTTCATCCCTTTTCAGCCCTCAAGGGAACAAAGCCGATGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344417.10
ENST00000359073.9