RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C6ORF89 (Homo sapiens)

Ensembl gene IDs: ENSG00000198663

Ensembl transcript IDs: ENST00000355190.7, ENST00000359359.6, ENST00000373685.1, ENST00000480824.7

Found 519 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGATGTGGTGCACGAGAAGGAGAGCACCTGTCCGTCTCCCTGACATaGTTCTGGAAGAGGCTGCTGGGGATGTGGAGACTGGGGGTGGGG +
Preference number: 1 (lower is better)
Translates to: GCGAREGEHLSVSLT*FWKRLLGMWRLGVG
Trigger: CCCCACCCCCAGTCTCCACATCCCCAGCAGCCTCTTCCAGAAGCATGTCAGGGAGACGGACAGGTGCTCTCCTTCTCGTGCACCACATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR TCA 90 bp GCTGACCCCCATCCCTGGGTTCTCCCACCCCAACGGAGGCACATCTaGGTCAACGACATCCACAGCTGTCTTCTTCGGCACCATGCCGTG +
Preference number: 1 (lower is better)
Translates to: ADPHPWVLPPQRRHI*VNDIHSCLLRHHAV
Trigger: CACGGCATGGTGCCGAAGAAGACAGCTGTGGATGTCGTTGACTCAGATGTGCCTCCGTTGGGGTGGGAGAACCCAGGGATGGGGGTCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR TCA 90 bp GACTTGGATGTGGTGCACGAGAAGGAGAGCACCTGTCCGTCTCCCTaGCATGCTTCTGGAAGAGGCTGCTGGGGATGTGGAGACTGGGGG +
Preference number: 1 (lower is better)
Translates to: DLDVVHEKESTCPSP*HASGRGCWGCGDWG
Trigger: CCCCCAGTCTCCACATCCCCAGCAGCCTCTTCCAGAAGCATGTCAGGGAGACGGACAGGTGCTCTCCTTCTCGTGCACCACATCCAAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR GCA 90 bp ATACTAAAAGCTCAAGCCATTCAGAGCCGCTGTGGCTGTGACAGCTaGCTGCCTCCCTCTGCTCCCTGGGACCATCCAGGGCCACCACAC +
Preference number: 1 (lower is better)
Translates to: ILKAQAIQSRCGCDS*LPPSAPWDHPGPPH
Trigger: GTGTGGTGGCCCTGGATGGTCCCAGGGAGCAGAGGGAGGCAGGCAGCTGTCACAGCCACAGCGGCTCTGAATGGCTTGAGCTTTTAGTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR GCA 90 bp CAGTGCTTGCCGCCATGGCTCATTCTTGGATTGATGGCTGCTGCCTaGCTGACAGACACACTAGGCAGAGGCGGAAGGGTCTCTGGTCCA +
Preference number: 1 (lower is better)
Translates to: QCLPPWLILGLMAAA*LTDTLGRGGRVSGP
Trigger: TGGACCAGAGACCCTTCCGCCTCTGCCTAGTGTGTCTGTCAGGCAGGCAGCAGCCATCAATCCAAGAATGAGCCATGGCGGCAAGCACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR GCA 90 bp CACACAGTGCTTGCCGCCATGGCTCATTCTTGGATTGATGGCTGCTaGCTGCCTGACAGACACACTAGGCAGAGGCGGAAGGGTCTCTGG +
Preference number: 1 (lower is better)
Translates to: HTVLAAMAHSWIDGC*LPDRHTRQRRKGLW
Trigger: CCAGAGACCCTTCCGCCTCTGCCTAGTGTGTCTGTCAGGCAGGCAGCAGCCATCAATCCAAGAATGAGCCATGGCGGCAAGCACTGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR GCA 90 bp CTCCACACAGTGCTTGCCGCCATGGCTCATTCTTGGATTGATGGCTaGTGCCTGCCTGACAGACACACTAGGCAGAGGCGGAAGGGTCTC +
Preference number: 1 (lower is better)
Translates to: LHTVLAAMAHSWIDG*CLPDRHTRQRRKGL
Trigger: GAGACCCTTCCGCCTCTGCCTAGTGTGTCTGTCAGGCAGGCAGCAGCCATCAATCCAAGAATGAGCCATGGCGGCAAGCACTGTGTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR CCA 90 bp TGGCATCCTGCTGTGCAGGGCCTTGATCATCAGAAAGGGACTGGCTaGCAACCCCTAGCCACTCCTGTCGCTCTGGCCAGTAGTAGATTC +
Preference number: 1 (lower is better)
Translates to: WHPAVQGLDHQKGTG*QPLATPVALASSRF
Trigger: GAATCTACTACTGGCCAGAGCGACAGGAGTGGCTAGGGGTTGCCAGCCAGTCCCTTTCTGATGATCAAGGCCCTGCACAGCAGGATGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR CCA 90 bp AGGGTTTCTCTTCAAGGCCAGCATTTAGTCACACTGCGTCCACGGTaGGTGGACTTGGATGTGGTGCACGAGAAGGAGAGCACCTGTCCG +
Preference number: 1 (lower is better)
Translates to: RVSLQGQHLVTLRPR*VDLDVVHEKESTCP
Trigger: CGGACAGGTGCTCTCCTTCTCGTGCACCACATCCAAGTCCACCCACCGTGGACGCAGTGTGACTAAATGCTGGCCTTGAAGAGAAACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR CCA 90 bp CTGGGTTCCTTTCTCCACACAGTGCTTGCCGCCATGGCTCATTCTTaGATTGATGGCTGCTGCCTGCCTGACAGACACACTAGGCAGAGG +
Preference number: 1 (lower is better)
Translates to: LGSFLHTVLAAMAHS*IDGCCLPDRHTRQR
Trigger: CCTCTGCCTAGTGTGTCTGTCAGGCAGGCAGCAGCCATCAATCCAAGAATGAGCCATGGCGGCAAGCACTGTGTGGAGAAAGGAACCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR CCA 90 bp TCAGACCTCGGCTGGGTTCCTTTCTCCACACAGTGCTTGCCGCCATaGCTCATTCTTGGATTGATGGCTGCTGCCTGCCTGACAGACACA +
Preference number: 1 (lower is better)
Translates to: SDLGWVPFSTQCLPP*LILGLMAAACLTDT
Trigger: TGTGTCTGTCAGGCAGGCAGCAGCCATCAATCCAAGAATGAGCCATGGCGGCAAGCACTGTGTGGAGAAAGGAACCCAGCCGAGGTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR TCA 90 bp CCACAGCTGTCTTCTTCGGCACCATGCCGTGATGCCGCAGGAAAATaGTGTGCTATGGAACCAGCTACCTACCTGCCAGCGGTTAACTGC +
Preference number: 1 (lower is better)
Translates to: PQLSSSAPCRDAAGK*CAMEPATYLPAVNC
Trigger: GCAGTTAACCGCTGGCAGGTAGGTAGCTGGTTCCATAGCACATCATTTTCCTGCGGCATCACGGCATGGTGCCGAAGAAGACAGCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR TCA 90 bp CCCACTGCTGTTCATGAGACCCACAGAGAAAGAGGGCCTGAGAGATaGGATGCAGGCTCCTCCAGGAATGAAGAGGGCTTCACAACCATC +
Preference number: 1 (lower is better)
Translates to: PTAVHETHRERGPER*DAGSSRNEEGFTTI
Trigger: GATGGTTGTGAAGCCCTCTTCATTCCTGGAGGAGCCTGCATCTCATCTCTCAGGCCCTCTTTCTCTGTGGGTCTCATGAACAGCAGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR TCA 90 bp TGCTACAGAGCTGTCTCCACAAGCGCCTTCACTCTCCTAGCTTCCTaGCCCTGCCATGCATCGGTTCTGTACACAACATCTGCAGGTCCA +
Preference number: 1 (lower is better)
Translates to: CYRAVSTSAFTLLAS*PCHASVLYTTSAGP
Trigger: TGGACCTGCAGATGTTGTGTACAGAACCGATGCATGGCAGGGTCAGGAAGCTAGGAGAGTGAAGGCGCTTGTGGAGACAGCTCTGTAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR CCA 90 bp GGCAGGGAAACCAGAGACACTGAGGGACCTGGACAACAGACAAGCTaGCTGAGGGTTTCTCTTCAAGGCCAGCATTTAGTCACACTGCGT +
Preference number: 1 (lower is better)
Translates to: GRETRDTEGPGQQTS*LRVSLQGQHLVTLR
Trigger: ACGCAGTGTGACTAAATGCTGGCCTTGAAGAGAAACCCTCAGCCAGCTTGTCTGTTGTCCAGGTCCCTCAGTGTCTCTGGTTTCCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR GCA 90 bp CTGCTGGTGACACAAACACATTCCCGGAGGCTTCCGTGTTTCATTTaGTACAGAGCTGTCTCCACAAGCGCCTTCACTCTCCTAGCTTCC +
Preference number: 1 (lower is better)
Translates to: LLVTQTHSRRLPCFI*YRAVSTSAFTLLAS
Trigger: GGAAGCTAGGAGAGTGAAGGCGCTTGTGGAGACAGCTCTGTAGCAAATGAAACACGGAAGCCTCCGGGAATGTGTTTGTGTCACCAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR TCA 90 bp TCTGAGTCAACGACATCCACAGCTGTCTTCTTCGGCACCATGCCGTaGTGCCGCAGGAAAATGATGTGCTATGGAACCAGCTACCTACCT +
Preference number: 1 (lower is better)
Translates to: SESTTSTAVFFGTMP*CRRKMMCYGTSYLP
Trigger: AGGTAGGTAGCTGGTTCCATAGCACATCATTTTCCTGCGGCATCACGGCATGGTGCCGAAGAAGACAGCTGTGGATGTCGTTGACTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR CCA 90 bp TGTCCTTTGCAAGCCCATAGACAAACAGGCCATTCAAGTGCTCAATaGTCCCCACTGCTGTTCATGAGACCCACAGAGAAAGAGGGCCTG +
Preference number: 1 (lower is better)
Translates to: CPLQAHRQTGHSSAQ*SPLLFMRPTEKEGL
Trigger: CAGGCCCTCTTTCTCTGTGGGTCTCATGAACAGCAGTGGGGACCATTGAGCACTTGAATGGCCTGTTTGTCTATGGGCTTGCAAAGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR CCA 90 bp AGAACTTCTTTAATCAGCCATGGCCTTCCAAAAAGTAGAGTGATGTaGCAGGCAAGACAGGGACAAGCAGGCCCACCTGGTAAAGGATGG +
Preference number: 1 (lower is better)
Translates to: RTSLISHGLPKSRVM*QARQGQAGPPGKGW
Trigger: CCATCCTTTACCAGGTGGGCCTGCTTGTCCCTGTCTTGCCTGCCACATCACTCTACTTTTTGGAAGGCCATGGCTGATTAAAGAAGTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
3UTR GCA 90 bp GTGATGCCGCAGGAAAATGATGTGCTATGGAACCAGCTACCTACCTaGCAGCGGTTAACTGCTCTAAGCCTCCACTTATTTACTTGCAAA +
Preference number: 1 (lower is better)
Translates to: VMPQENDVLWNQLPT*QRLTALSLHLFTCK
Trigger: TTTGCAAGTAAATAAGTGGAGGCTTAGAGCAGTTAACCGCTGGCAGGTAGGTAGCTGGTTCCATAGCACATCATTTTCCTGCGGCATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR TCA 90 bp TCTTCACATGGTGGAAGTCTTTACCAGTTTGTAGTATCCTGCACTTaGACACATACTAAAAGCTCAAGCCATTCAGAGCCGCTGTGGCTG +
Preference number: 1 (lower is better)
Translates to: SSHGGSLYQFVVSCT*THTKSSSHSEPLWL
Trigger: CAGCCACAGCGGCTCTGAATGGCTTGAGCTTTTAGTATGTGTTCAAGTGCAGGATACTACAAACTGGTAAAGACTTCCACCATGTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR GCA 90 bp CCTAGCTTCCTGACCCTGCCATGCATCGGTTCTGTACACAACATCTaGAGGTCCAAATACAGAGAGAATTTCAGCCTAAAGTACAACTTT +
Preference number: 1 (lower is better)
Translates to: PSFLTLPCIGSVHNI*RSKYRENFSLKYNF
Trigger: AAAGTTGTACTTTAGGCTGAAATTCTCTCTGTATTTGGACCTGCAGATGTTGTGTACAGAACCGATGCATGGCAGGGTCAGGAAGCTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR CCA 90 bp CAGACTCTAGCCTGGCATCACGGAGACTCCAAGAGCCACGGACAATaGGAAAGAAGTGTACTTCTTGAATGCAATTCAAAGTTATCTGAA +
Preference number: 1 (lower is better)
Translates to: QTLAWHHGDSKSHGQ*ERSVLLECNSKLSE
Trigger: TTCAGATAACTTTGAATTGCATTCAAGAAGTACACTTCTTTCCCATTGTCCGTGGCTCTTGGAGTCTCCGTGATGCCAGGCTAGAGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
3UTR CCA 90 bp GTCCCTCCTCTGTCACACATCTGGAAGAATGTGGAGACAGGAAAATaGCTGGACACAGTTGTGTTTCAGCTACATTCACTCTTAAAAAGA +
Preference number: 1 (lower is better)
Translates to: VPPLSHIWKNVETGK*LDTVVFQLHSLLKR
Trigger: TCTTTTTAAGAGTGAATGTAGCTGAAACACAACTGTGTCCAGCCATTTTCCTGTCTCCACATTCTTCCAGATGTGTGACAGAGGAGGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR CCA 90 bp CTTGGGAGTTACCATTTTGAATTATTATATAATCAGACTCTAGCCTaGCATCACGGAGACTCCAAGAGCCACGGACAATGGGAAAGAAGT +
Preference number: 1 (lower is better)
Translates to: LGSYHFELLYNQTLA*HHGDSKSHGQWERS
Trigger: ACTTCTTTCCCATTGTCCGTGGCTCTTGGAGTCTCCGTGATGCCAGGCTAGAGTCTGATTATATAATAATTCAAAATGGTAACTCCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
3UTR TCA 90 bp CTGCCTCTGATCCATAATTCTGACATAGACACCTACTGCATCCTTTaGTTTCTGCAATTCAGAACCAGAGGCCAAAGTGTAGTTTGCTTT +
Preference number: 1 (lower is better)
Translates to: LPLIHNSDIDTYCIL*FLQFRTRGQSVVCF
Trigger: AAAGCAAACTACACTTTGGCCTCTGGTTCTGAATTGCAGAAATCAAAGGATGCAGTAGGTGTCTATGTCAGAATTATGGATCAGAGGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR TCA 90 bp TTGTCAGGAGAGCTCAAAATCCTAAGAGGCCCTTCTGTTTATAACTaGTTCTCGAAAGGTAGACAAAATTGCCTCTCTCTGTGCAAACAG +
Preference number: 1 (lower is better)
Translates to: LSGELKILRGPSVYN*FSKGRQNCLSLCKQ
Trigger: CTGTTTGCACAGAGAGAGGCAATTTTGTCTACCTTTCGAGAATCAGTTATAAACAGAAGGGCCTCTTAGGATTTTGAGCTCTCCTGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR GCA 90 bp TTTTTCATCAACCATAATAAGTATGGTATCCATTCACTACTTGACTaGTGGAGAGCTCAGGACATTTGGACAGAATGCTTCAAACTGGGG +
Preference number: 1 (lower is better)
Translates to: FFINHNKYGIHSLLD*WRAQDIWTECFKLG
Trigger: CCCCAGTTTGAAGCATTCTGTCCAAATGTCCTGAGCTCTCCAGCAGTCAAGTAGTGAATGGATACCATACTTATTATGGTTGATGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR CCA 90 bp ACCTGGCTTTCTCCTTTATGGACAAGGAGATGCAAACATTTGCTTTaGGGTTTGAACATTCACTACGAAAGTGACTGGGTAATAAGCAAA +
Preference number: 1 (lower is better)
Translates to: TWLSPLWTRRCKHLL*GLNIHYESDWVISK
Trigger: TTTGCTTATTACCCAGTCACTTTCGTAGTGAATGTTCAAACCCCAAAGCAAATGTTTGCATCTCCTTGTCCATAAAGGAGAAAGCCAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR CCA 90 bp CTTATTTACTTGCAAAATGGGGATCTAACACCTACTTTACAGGATTaGGTGAAGATTAAAGGAGATCATGTATATCAGGCACTTTGTAAA +
Preference number: 1 (lower is better)
Translates to: LIYLQNGDLTPTLQD*VKIKGDHVYQALCK
Trigger: TTTACAAAGTGCCTGATATACATGATCTCCTTTAATCTTCACCCAATCCTGTAAAGTAGGTGTTAGATCCCCATTTTGCAAGTAAATAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR-3UTR TCA 90 bp CCGGAAGGAGAGCTGCAGCTGACCCTGGCACCTGTCCCCGATGATGGCGGGAGCAGGCTGAATCCTTCCTaGGCCACCTGCAGGAAGAGT +
Preference number: 2 (lower is better)
Translates to: PEGELQLTLAPVPDDGGSRLNPS*ATCRKS
Trigger: ACTCTTCCTGCAGGTGGCTCAGGAAGGATTCAGCCT...GCTCCCGCCATCATCGGGGACAGGTGCCAGGGTCAGCTGCAGCTCTCCTTCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR-3UTR GCA 90 bp GTGGGCTCTGGCCCCGCCAAGGCAGGGAGGACTAGGGCCGAGCTTCTGAGAAGCACCAGCCCTGTTTCCTaGCTGAAGGGCAGCATCAAG +
Preference number: 2 (lower is better)
Translates to: VGSGPAKAGRTRAELLRSTSPVS*LKGSIK
Trigger: CTTGATGCTGCCCTTCAGGCAGGAAACAGGGCTGGT...GCTTCTCAGAAGCTCGGCCCTAGTCCTCCCTGCCTTGGCGGGGCCAGAGCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
3UTR-3UTR CCA 90 bp GCCATGCAGGTGAAGAAAGGCACCAGCCCTGTTTCCTGCCTGAAGGGCAGCATCAGGAGGGCGAGGCTCTaGCCACTGCCTTGCAGCTCA +
Preference number: 2 (lower is better)
Translates to: AMQVKKGTSPVSCLKGSIRRARL*PLPCSS
Trigger: TGAGCTGCAAGGCAGTGGCCAGAGCCTCGCCCTCCT...GATGCTGCCCTTCAGGCAGGAAACAGGGCTGGTGCCTTTCTTCACCTGCATGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
3UTR-3UTR CCA 90 bp AGTCAGACCCTAAAGATCAAACCCAGGGAGGCACCCTCTCCCCAGGCCAGCTACAGGAGGGCGAGGCTCTaGCCACTGCCTTGCAGCTCA +
Preference number: 2 (lower is better)
Translates to: SQTLKIKPREAPSPQASYRRARL*PLPCSS
Trigger: TGAGCTGCAAGGCAGTGGCCAGAGCCTCGCCCTCCT...GTAGCTGGCCTGGGGAGAGGGTGCCTCCCTGGGTTTGATCTTTAGGGTCTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
3UTR-3UTR CCA 90 bp GGGAGGCACCCTCTCCCCAGGCCAGCTACTCTAACTCATAACCCTCTGAAGACAAGCAGTAGTGGGCTCTaGCCCCGCCAAGGCAGGGAG +
Preference number: 2 (lower is better)
Translates to: GRHPLPRPATLTHNPLKTSSSGL*PRQGRE
Trigger: CTCCCTGCCTTGGCGGGGCCAGAGCCCACTACTGCT...TGTCTTCAGAGGGTTATGAGTTAGAGTAGCTGGCCTGGGGAGAGGGTGCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
3UTR-3UTR CCA 90 bp GCGCTGAGTCCCTGTCTTGCCTGTGACTCCTCCTTCCCCGACCCTCGGCATTGGTCATCAGAAAGGGACTaGCTGGCAACCCCTAGCCAC +
Preference number: 2 (lower is better)
Translates to: ALSPCLACDSSFPDPRHWSSERD*LATPSH
Trigger: GTGGCTAGGGGTTGCCAGCCAGTCCCTTTCTGATGA...CCAATGCCGAGGGTCGGGGAAGGAGGAGTCACAGGCAAGACAGGGACTCAGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR-3UTR TCA 90 bp GCGCTGAGTCCCTGTCTTGCCTGTGACTCCTCCTTCCCCGACCCTCGGCATTGGACCCACAACTGGAATTaGGCAGAGTCCCTCCTCTGT +
Preference number: 2 (lower is better)
Translates to: ALSPCLACDSSFPDPRHWTHNWN*AESLLC
Trigger: ACAGAGGAGGGACTCTGCTCAATTCCAGTTGTGGGT...CCAATGCCGAGGGTCGGGGAAGGAGGAGTCACAGGCAAGACAGGGACTCAGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR-3UTR TCA 90 bp GCGCTGAGTCCCTGTCTTGCCTGTGACTCCTCCTTCCCCGACCCTCGGCATTGGGAGCGATGGTGTCAATaGAGCCTGGCACAGAGAAGA +
Preference number: 2 (lower is better)
Translates to: ALSPCLACDSSFPDPRHWERWCQ*SLAQRR
Trigger: TCTTCTCTGTGCCAGGCTTCATTGACACCATCGCTC...CCAATGCCGAGGGTCGGGGAAGGAGGAGTCACAGGCAAGACAGGGACTCAGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR-3UTR CCA 90 bp CCGGAAGGAGAGCTGCAGCTGACCCTGGCACCTGTCCCCGATGATGGCGGGAGCTTTCCCCTTTCAACCTaGTTTTCGGCTCTGGAAGCT +
Preference number: 2 (lower is better)
Translates to: PEGELQLTLAPVPDDGGSFPLST*FSALEA
Trigger: AGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGAAA...GCTCCCGCCATCATCGGGGACAGGTGCCAGGGTCAGCTGCAGCTCTCCTTCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR-3UTR CCA 90 bp GGCTGGGTTCCTTTCTCCACACAGTGCTTGCCGCCATGGCTCATTCTTGGATTGAGCAGTAGTGGGCTCTaGCCCCGCCAAGGCAGGGAG +
Preference number: 2 (lower is better)
Translates to: GWVPFSTQCLPPWLILGLSSSGL*PRQGRE
Trigger: CTCCCTGCCTTGGCGGGGCCAGAGCCCACTACTGCT...CAATCCAAGAATGAGCCATGGCGGCAAGCACTGTGTGGAGAAAGGAACCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR-3UTR TCA 90 bp AGTCAGACCCTAAAGATCAAACCCAGGGAGGCACCCTCTCCCCAGGCCAGCTACGCCCTGTTTCCTGCCTaGAGGGCAGCATCAAGGTCA +
Preference number: 2 (lower is better)
Translates to: SQTLKIKPREAPSPQASYALFPA*RAASRS
Trigger: TGACCTTGATGCTGCCCTTCAGGCAGGAAACAGGGC...GTAGCTGGCCTGGGGAGAGGGTGCCTCCCTGGGTTTGATCTTTAGGGTCTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
3UTR-3UTR GCA 90 bp GCCATGCAGGTGAAGAAAGGCACCAGCCCTGTTTCCTGCCTGAAGGGCAGCATCCTCTGGCCACTGCCTTaGAGCTCACAGCTGGTTCAC +
Preference number: 2 (lower is better)
Translates to: AMQVKKGTSPVSCLKGSILWPLP*SSQLVH
Trigger: GTGAACCAGCTGTGAGCTGCAAGGCAGTGGCCAGAG...GATGCTGCCCTTCAGGCAGGAAACAGGGCTGGTGCCTTTCTTCACCTGCATGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
3UTR-3UTR GCA 90 bp CCGGAAGGAGAGCTGCAGCTGACCCTGGCACCTGTCCCCGATGATGGCGGGAGCCTTCCGTGTTTCATTTaGTACAGAGCTGTCTCCACA +
Preference number: 2 (lower is better)
Translates to: PEGELQLTLAPVPDDGGSLPCFI*YRAVST
Trigger: TGTGGAGACAGCTCTGTAGCAAATGAAACACGGAAG...GCTCCCGCCATCATCGGGGACAGGTGCCAGGGTCAGCTGCAGCTCTCCTTCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR-3UTR TCA 90 bp CCGGAAGGAGAGCTGCAGCTGACCCTGGCACCTGTCCCCGATGATGGCGGGAGCAAAGTAAGTGTACACTaGGTCCTATGCTGGGTTTTG +
Preference number: 2 (lower is better)
Translates to: PEGELQLTLAPVPDDGGSKVSVH*VLCWVL
Trigger: CAAAACCCAGCATAGGACTCAGTGTACACTTACTTT...GCTCCCGCCATCATCGGGGACAGGTGCCAGGGTCAGCTGCAGCTCTCCTTCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR-3UTR CCA 90 bp GCGCTGAGTCCCTGTCTTGCCTGTGACTCCTCCTTCCCCGACCCTCGGCATTGGCCTCTGTCACACATCTaGAAGAATGTGGAGACAGGA +
Preference number: 2 (lower is better)
Translates to: ALSPCLACDSSFPDPRHWPLSHI*KNVETG
Trigger: TCCTGTCTCCACATTCTTCCAGATGTGTGACAGAGG...CCAATGCCGAGGGTCGGGGAAGGAGGAGTCACAGGCAAGACAGGGACTCAGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR CAA 90 bp GTTCCTTTCTCCACACAGTGCTTGCCGCCATGGCTCATTCTTGGATaGATGGCTGCTGCCTGCCTGACAGACACACTAGGCAGAGGCGGA +
Preference number: 2 (lower is better)
Translates to: VPFSTQCLPPWLILG*MAAACLTDTLGRGG
Trigger: TCCGCCTCTGCCTAGTGTGTCTGTCAGGCAGGCAGCAGCCATCAATCCAAGAATGAGCCATGGCGGCAAGCACTGTGTGGAGAAAGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR-3UTR TCA 90 bp TCAAACCCAGGGAGGCACCCTCTCCCCAGGCCAGCTACTCTAACTCATAACCCTAGGCTGAATCCTTCCTaGGCCACCTGCAGGAAGAGT +
Preference number: 2 (lower is better)
Translates to: SNPGRHPLPRPATLTHNPRLNPS*ATCRKS
Trigger: ACTCTTCCTGCAGGTGGCTCAGGAAGGATTCAGCCT...AGGGTTATGAGTTAGAGTAGCTGGCCTGGGGAGAGGGTGCCTCCCTGGGTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
3UTR-3UTR TCA 90 bp TTGCTGACCCCCATCCCTGGGTTCTCCCACCCCAACGGAGGCACATCTGAGTCAGATGCCGCAGGAAAATaGTGTGCTATGGAACCAGCT +
Preference number: 2 (lower is better)
Translates to: LLTPIPGFSHPNGGTSESDAAGK*CAMEPA
Trigger: AGCTGGTTCCATAGCACATCATTTTCCTGCGGCATC...TGACTCAGATGTGCCTCCGTTGGGGTGGGAGAACCCAGGGATGGGGGTCAGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR-3UTR GCA 90 bp GCGCTGAGTCCCTGTCTTGCCTGTGACTCCTCCTTCCCCGACCCTCGGCATTGGTGGTTCACACATGCATaGAAAGGGCAGGTAACTAAG +
Preference number: 2 (lower is better)
Translates to: ALSPCLACDSSFPDPRHWWFTHA*KGQVTK
Trigger: CTTAGTTACCTGCCCTTTGCATGCATGTGTGAACCA...CCAATGCCGAGGGTCGGGGAAGGAGGAGTCACAGGCAAGACAGGGACTCAGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR-3UTR GCA 90 bp GGGAGGCACCCTCTCCCCAGGCCAGCTACTCTAACTCATAACCCTCTGAAGACATTAGAACCTGTTGGCTaGCCTCTCCACTGCCAGGGA +
Preference number: 2 (lower is better)
Translates to: GRHPLPRPATLTHNPLKTLEPVG*PLHCQG
Trigger: TCCCTGGCAGTGGAGAGGGCAGCCAACAGGTTCTAA...TGTCTTCAGAGGGTTATGAGTTAGAGTAGCTGGCCTGGGGAGAGGGTGCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
3UTR-3UTR CCA 90 bp GGCAGGCAAGACAGGGACAAGCAGGCCCACCTGGTAAAGGATGGCTCTGACATTGTCTCAGATGGGTGCTaGCAGAGTCCTAGCCAAGTG +
Preference number: 2 (lower is better)
Translates to: GRQDRDKQAHLVKDGSDIVSDGC*QSPSQV
Trigger: CACTTGGCTAGGACTCTGCCAGCACCCATCTGAGAC...AATGTCAGAGCCATCCTTTACCAGGTGGGCCTGCTTGTCCCTGTCTTGCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
3UTR-3UTR CCA 90 bp CCGGAAGGAGAGCTGCAGCTGACCCTGGCACCTGTCCCCGATGATGGCGGGAGCGCCCACCATCACGCCTaGGTAATTTTTGTATTTTTA +
Preference number: 2 (lower is better)
Translates to: PEGELQLTLAPVPDDGGSAHHHA*VIFVFL
Trigger: TAAAAATACAAAAATTACCCAGGCGTGATGGTGGGC...GCTCCCGCCATCATCGGGGACAGGTGCCAGGGTCAGCTGCAGCTCTCCTTCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR CAA 90 bp ATCCTGACAACCCTCTTTCCCACACCGGGTCATACAGAGGGACTTTaGATGCTTCCAGCTAGATGGCAGGGGCATCCTGTGGCATCCTGC +
Preference number: 2 (lower is better)
Translates to: ILTTLFPTPGHTEGL*MLPARWQGHPVASC
Trigger: GCAGGATGCCACAGGATGCCCCTGCCATCTAGCTGGAAGCATCAAAAGTCCCTCTGTATGACCCGGTGTGGGAAAGAGGGTTGTCAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR-3UTR TCA 90 bp GGCTTCCGTGTTTCATTTGCTACAGAGCTGTCTCCACAAGCGCCTTCACTCTCCCTAGGGCCGAGCTTCTaGGAAGCCATCCAGATAGGC +
Preference number: 2 (lower is better)
Translates to: GFRVSFATELSPQAPSLSLGPSF*EAIQIG
Trigger: GCCTATCTGGATGGCTTCTCAGAAGCTCGGCCCTAG...GGAGAGTGAAGGCGCTTGTGGAGACAGCTCTGTAGCAAATGAAACACGGAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR-3UTR GCA 90 bp AGTCAGACCCTAAAGATCAAACCCAGGGAGGCACCCTCTCCCCAGGCCAGCTACCAGCTGGTTCACACATaGATGCAAAGGGCAGGTAAC +
Preference number: 2 (lower is better)
Translates to: SQTLKIKPREAPSPQASYQLVHT*MQRAGN
Trigger: GTTACCTGCCCTTTGCATGCATGTGTGAACCAGCTG...GTAGCTGGCCTGGGGAGAGGGTGCCTCCCTGGGTTTGATCTTTAGGGTCTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
3UTR-3UTR CCA 90 bp AGAAAGTCAGACCCTAAAGATCAAACCCAGGGAGGCACCCTCTCCCCAGGCCAGCCTGGTTTTCGGCTCTaGAAGCTGTTCCTGTGCACA +
Preference number: 2 (lower is better)
Translates to: RKSDPKDQTQGGTLSPGQPGFRL*KLFLCT
Trigger: TGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGG...CTGGCCTGGGGAGAGGGTGCCTCCCTGGGTTTGATCTTTAGGGTCTGACTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
3UTR-3UTR GCA 90 bp CAAGACAGGGACAAGCAGGCCCACCTGGTAAAGGATGGCTCTGACATTAGAACCACCAGCCCTGTTTCCTaGCTGAAGGGCAGCATCAAG +
Preference number: 2 (lower is better)
Translates to: QDRDKQAHLVKDGSDIRTTSPVS*LKGSIK
Trigger: CTTGATGCTGCCCTTCAGGCAGGAAACAGGGCTGGT...GGTTCTAATGTCAGAGCCATCCTTTACCAGGTGGGCCTGCTTGTCCCTGTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
3UTR-3UTR GCA 90 bp GGCTGGGTTCCTTTCTCCACACAGTGCTTGCCGCCATGGCTCATTCTTGGATTGTGGACTTGGATGTGGTaGACGAGAAGGAGAGCACCT +
Preference number: 2 (lower is better)
Translates to: GWVPFSTQCLPPWLILGLWTWMW*TRRRAP
Trigger: AGGTGCTCTCCTTCTCGTGCACCACATCCAAGTCCA...CAATCCAAGAATGAGCCATGGCGGCAAGCACTGTGTGGAGAAAGGAACCCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR-3UTR CCA 90 bp AGTCAGACCCTAAAGATCAAACCCAGGGAGGCACCCTCTCCCCAGGCCAGCTACCTTGCAGCTCACAGCTaGTTCACACATGCATGCAAA +
Preference number: 2 (lower is better)
Translates to: SQTLKIKPREAPSPQASYLAAHS*FTHACK
Trigger: TTTGCATGCATGTGTGAACCAGCTGTGAGCTGCAAG...GTAGCTGGCCTGGGGAGAGGGTGCCTCCCTGGGTTTGATCTTTAGGGTCTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
3UTR-3UTR CCA 90 bp CAAGACAGGGACAAGCAGGCCCACCTGGTAAAGGATGGCTCTGACATTAGAACCGTCTCAGATGGGTGCTaGCAGAGTCCTAGCCAAGTG +
Preference number: 2 (lower is better)
Translates to: QDRDKQAHLVKDGSDIRTVSDGC*QSPSQV
Trigger: CACTTGGCTAGGACTCTGCCAGCACCCATCTGAGAC...GGTTCTAATGTCAGAGCCATCCTTTACCAGGTGGGCCTGCTTGTCCCTGTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
3UTR CAA 90 bp GCTGCTGGTGACACAAACACATTCCCGGAGGCTTCCGTGTTTCATTaGCTACAGAGCTGTCTCCACAAGCGCCTTCACTCTCCTAGCTTC +
Preference number: 2 (lower is better)
Translates to: AAGDTNTFPEASVFH*LQSCLHKRLHSPSF
Trigger: GAAGCTAGGAGAGTGAAGGCGCTTGTGGAGACAGCTCTGTAGCAAATGAAACACGGAAGCCTCCGGGAATGTGTTTGTGTCACCAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR-3UTR TCA 90 bp GCGCTGAGTCCCTGTCTTGCCTGTGACTCCTCCTTCCCCGACCCTCGGCATTGGAACTGCTTAACAACATaGCTTTCATACGTACACAAG +
Preference number: 2 (lower is better)
Translates to: ALSPCLACDSSFPDPRHWNCLTT*LSYVHK
Trigger: CTTGTGTACGTATGAAAGTCATGTTGTTAAGCAGTT...CCAATGCCGAGGGTCGGGGAAGGAGGAGTCACAGGCAAGACAGGGACTCAGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR-3UTR GCA 90 bp GGCTGGGTTCCTTTCTCCACACAGTGCTTGCCGCCATGGCTCATTCTTGGATTGTTCCTGACCCTGCCATaGATCGGTTCTGTACACAAC +
Preference number: 2 (lower is better)
Translates to: GWVPFSTQCLPPWLILGLFLTLP*IGSVHN
Trigger: GTTGTGTACAGAACCGATGCATGGCAGGGTCAGGAA...CAATCCAAGAATGAGCCATGGCGGCAAGCACTGTGTGGAGAAAGGAACCCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR-3UTR CCA 90 bp AAATTATGCAGGGCAGGGAAACCAGAGACACTGAGGGACCTGGACAACAGACAACAGAAAGGGACTGGCTaGCAACCCCTAGCCACTCCT +
Preference number: 2 (lower is better)
Translates to: KLCRAGKPETLRDLDNRQQKGTG*QPLATP
Trigger: AGGAGTGGCTAGGGGTTGCCAGCCAGTCCCTTTCTG...TTGTCTGTTGTCCAGGTCCCTCAGTGTCTCTGGTTTCCCTGCCCTGCATAATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR-3UTR CCA 90 bp TTGCTGACCCCCATCCCTGGGTTCTCCCACCCCAACGGAGGCACATCTGAGTCAAGAGCTCAGGACATTTaGACAGAATGCTTCAAACTG +
Preference number: 2 (lower is better)
Translates to: LLTPIPGFSHPNGGTSESRAQDI*TECFKL
Trigger: CAGTTTGAAGCATTCTGTCCAAATGTCCTGAGCTCT...TGACTCAGATGTGCCTCCGTTGGGGTGGGAGAACCCAGGGATGGGGGTCAGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR-3UTR CCA 90 bp GCGCTGAGTCCCTGTCTTGCCTGTGACTCCTCCTTCCCCGACCCTCGGCATTGGCACTACGAAAGTGACTaGGTAATAAGCAAACTCATT +
Preference number: 2 (lower is better)
Translates to: ALSPCLACDSSFPDPRHWHYESD*VISKLI
Trigger: AATGAGTTTGCTTATTACCCAGTCACTTTCGTAGTG...CCAATGCCGAGGGTCGGGGAAGGAGGAGTCACAGGCAAGACAGGGACTCAGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR-3UTR TCA 90 bp AGCTCTGTGAACTCTGCTTGTCCTTTGCAAGCCCATAGACAAACAGGCCATTCAGCCCTGTTTCCTGCCTaGAGGGCAGCATCAAGGTCA +
Preference number: 2 (lower is better)
Translates to: SSVNSACPLQAHRQTGHSALFPA*RAASRS
Trigger: TGACCTTGATGCTGCCCTTCAGGCAGGAAACAGGGC...TGAATGGCCTGTTTGTCTATGGGCTTGCAAAGGACAAGCAGAGTTCACAGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR-3UTR TCA 90 bp TTGCTGACCCCCATCCCTGGGTTCTCCCACCCCAACGGAGGCACATCTGAGTCACTTTACAGGATTGGGTaGAGATTAAAGGAGATCATG +
Preference number: 2 (lower is better)
Translates to: LLTPIPGFSHPNGGTSESLYRIG*RLKEIM
Trigger: CATGATCTCCTTTAATCTTCACCCAATCCTGTAAAG...TGACTCAGATGTGCCTCCGTTGGGGTGGGAGAACCCAGGGATGGGGGTCAGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR-3UTR TCA 90 bp ATGAAGCCTGGCACAGAGAAGATGTCCCAACTCCCCAGTTTCTGTCTGAAACTCTTCGGCACCATGCCGTaGTGCCGCAGGAAAATGATG +
Preference number: 2 (lower is better)
Translates to: MKPGTEKMSQLPSFCLKLFGTMP*CRRKMM
Trigger: CATCATTTTCCTGCGGCATCACGGCATGGTGCCGAA...GAGTTTCAGACAGAAACTGGGGAGTTGGGACATCTTCTCTGTGCCAGGCTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR-3UTR GCA 90 bp ACTCTAGCCTGGCATCACGGAGACTCCAAGAGCCACGGACAATGGGAAAGAAGTCAGCTGGTTCACACATaGATGCAAAGGGCAGGTAAC +
Preference number: 2 (lower is better)
Translates to: TLAWHHGDSKSHGQWERSQLVHT*MQRAGN
Trigger: GTTACCTGCCCTTTGCATGCATGTGTGAACCAGCTG...ACTTCTTTCCCATTGTCCGTGGCTCTTGGAGTCTCCGTGATGCCAGGCTAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
3UTR-3UTR TCA 90 bp AAATTATGCAGGGCAGGGAAACCAGAGACACTGAGGGACCTGGACAACAGACAAAGGCTCCTCCAGGAATaGAGAGGGCTTCACAACCAT +
Preference number: 2 (lower is better)
Translates to: KLCRAGKPETLRDLDNRQRLLQE*RGLHNH
Trigger: ATGGTTGTGAAGCCCTCTTCATTCCTGGAGGAGCCT...TTGTCTGTTGTCCAGGTCCCTCAGTGTCTCTGGTTTCCCTGCCCTGCATAATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR-3UTR GCA 90 bp GGCTGGGTTCCTTTCTCCACACAGTGCTTGCCGCCATGGCTCATTCTTGGATTGGACATTTGGACAGAATaGTTCAAACTGGGGCCAAAG +
Preference number: 2 (lower is better)
Translates to: GWVPFSTQCLPPWLILGLDIWTE*FKLGPK
Trigger: CTTTGGCCCCAGTTTGAAGCATTCTGTCCAAATGTC...CAATCCAAGAATGAGCCATGGCGGCAAGCACTGTGTGGAGAAAGGAACCCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR-3UTR GCA 90 bp CTCTGTAGTGGGAGGCCACATGAAAGTGAACCTAACTCATGTACAGAGGTCATCTGTGGCATCCTGCTGTaGAGGGCCTTGATCATCAGA +
Preference number: 2 (lower is better)
Translates to: LCSGRPHESEPNSCTEVICGILL*RALIIR
Trigger: TCTGATGATCAAGGCCCTGCACAGCAGGATGCCACA...GATGACCTCTGTACATGAGTTAGGTTCACTTTCATGTGGCCTCCCACTACAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR-3UTR GCA 90 bp GGCTTCCGTGTTTCATTTGCTACAGAGCTGTCTCCACAAGCGCCTTCACTCTCCCATTCACTACTTGACTaGTGGAGAGCTCAGGACATT +
Preference number: 2 (lower is better)
Translates to: GFRVSFATELSPQAPSLSHSLLD*WRAQDI
Trigger: AATGTCCTGAGCTCTCCAGCAGTCAAGTAGTGAATG...GGAGAGTGAAGGCGCTTGTGGAGACAGCTCTGTAGCAAATGAAACACGGAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR-3UTR CCA 90 bp AAATTATGCAGGGCAGGGAAACCAGAGACACTGAGGGACCTGGACAACAGACAAAATCAGACTCTAGCCTaGCATCACGGAGACTCCAAG +
Preference number: 2 (lower is better)
Translates to: KLCRAGKPETLRDLDNRQNQTLA*HHGDSK
Trigger: CTTGGAGTCTCCGTGATGCCAGGCTAGAGTCTGATT...TTGTCTGTTGTCCAGGTCCCTCAGTGTCTCTGGTTTCCCTGCCCTGCATAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR CAA 90 bp GACAGAGGATCACATAGGCAGTTGTACACCCAGCTGACAAACACTTaGGGTCTGGATTTCCTCCCCCAACCACATTACATCAGCTTTGAC +
Preference number: 2 (lower is better)
Translates to: DRGSHRQLYTQLTNT*GLDFLPQPHYISFD
Trigger: GTCAAAGCTGATGTAATGTGGTTGGGGGAGGAAATCCAGACCCAAAGTGTTTGTCAGCTGGGTGTACAACTGCCTATGTGATCCTCTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
3UTR CAA 90 bp GGCTCTGATGTTTCTATCCTGAGCTCTGTGAACTCTGCTTGTCCTTaGCAAGCCCATAGACAAACAGGCCATTCAAGTGCTCAATGGTCC +
Preference number: 2 (lower is better)
Translates to: GSDVSILSSVNSACP*QAHRQTGHSSAQWS
Trigger: GGACCATTGAGCACTTGAATGGCCTGTTTGTCTATGGGCTTGCAAAGGACAAGCAGAGTTCACAGAGCTCAGGATAGAAACATCAGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR-3UTR CCA 90 bp AAATTATGCAGGGCAGGGAAACCAGAGACACTGAGGGACCTGGACAACAGACAACAGAATGCTTCAAACTaGGGCCAAAGTAGCCTGTCT +
Preference number: 2 (lower is better)
Translates to: KLCRAGKPETLRDLDNRQQNASN*GQSSLS
Trigger: AGACAGGCTACTTTGGCCCCAGTTTGAAGCATTCTG...TTGTCTGTTGTCCAGGTCCCTCAGTGTCTCTGGTTTCCCTGCCCTGCATAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR-3UTR TCA 90 bp AGTTACCATTTTGAATTATTATATAATCAGACTCTAGCCTGGCATCACGGAGACAGCTGGCCATGCAGGTaGAGAAAGGCACCAGCCCTG +
Preference number: 2 (lower is better)
Translates to: SYHFELLYNQTLAWHHGDSWPCR*RKAPAL
Trigger: CAGGGCTGGTGCCTTTCTTCACCTGCATGGCCAGCT...GTCTCCGTGATGCCAGGCTAGAGTCTGATTATATAATAATTCAAAATGGTAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
3UTR-3UTR GCA 90 bp AAATTATGCAGGGCAGGGAAACCAGAGACACTGAGGGACCTGGACAACAGACAATCTGTACACAACATCTaGAGGTCCAAATACAGAGAG +
Preference number: 2 (lower is better)
Translates to: KLCRAGKPETLRDLDNRQSVHNI*RSKYRE
Trigger: CTCTCTGTATTTGGACCTGCAGATGTTGTGTACAGA...TTGTCTGTTGTCCAGGTCCCTCAGTGTCTCTGGTTTCCCTGCCCTGCATAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR-3UTR CCA 90 bp ACTCTAACTCATAACCCTCTGAAGACACTTGGTAAAGGCAACACAGCTGACGAGTTTCCCCTTTCAACCTaGTTTTCGGCTCTGGAAGCT +
Preference number: 2 (lower is better)
Translates to: TLTHNPLKTLGKGNTADEFPLST*FSALEA
Trigger: AGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGAAA...CTCGTCAGCTGTGTTGCCTTTACCAAGTGTCTTCAGAGGGTTATGAGTTAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
3UTR-3UTR CCA 90 bp GAAGAGGGCTTCACAACCATCTTCACTCGTCATTGTCTGCCTCTGATCCATAATCTTGCAGCTCACAGCTaGTTCACACATGCATGCAAA +
Preference number: 2 (lower is better)
Translates to: EEGFTTIFTRHCLPLIHNLAAHS*FTHACK
Trigger: TTTGCATGCATGTGTGAACCAGCTGTGAGCTGCAAG...ATTATGGATCAGAGGCAGACAATGACGAGTGAAGATGGTTGTGAAGCCCTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR-3UTR CCA 90 bp AGCTCTGTGAACTCTGCTTGTCCTTTGCAAGCCCATAGACAAACAGGCCATTCAGCTTTTTCTTCATCTTaGCAATGGCATGACCAGTGG +
Preference number: 2 (lower is better)
Translates to: SSVNSACPLQAHRQTGHSAFSSS*QWHDQW
Trigger: CCACTGGTCATGCCATTGCCAAGATGAAGAAAAAGC...TGAATGGCCTGTTTGTCTATGGGCTTGCAAAGGACAAGCAGAGTTCACAGAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR-3UTR GCA 90 bp ACTCTAACTCATAACCCTCTGAAGACACTTGGTAAAGGCAACACAGCTGACGAGTGGTTCACACATGCATaGAAAGGGCAGGTAACTAAG +
Preference number: 2 (lower is better)
Translates to: TLTHNPLKTLGKGNTADEWFTHA*KGQVTK
Trigger: CTTAGTTACCTGCCCTTTGCATGCATGTGTGAACCA...CTCGTCAGCTGTGTTGCCTTTACCAAGTGTCTTCAGAGGGTTATGAGTTAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
3UTR-3UTR TCA 90 bp CATTTGCTTTGGGGTTTGAACATTCACTACGAAAGTGACTGGGTAATAAGCAAAATCTTGGCAATGGCATaGCCAGTGGCCAGCTATCTA +
Preference number: 2 (lower is better)
Translates to: HLLWGLNIHYESDWVISKILAMA*PVASYL
Trigger: TAGATAGCTGGCCACTGGTCATGCCATTGCCAAGAT...TTTGCTTATTACCCAGTCACTTTCGTAGTGAATGTTCAAACCCCAAAGCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR-3UTR CCA 90 bp CTTTGGGGTTTGAACATTCACTACGAAAGTGACTGGGTAATAAGCAAACTCATTTCACTACTTGACTGCTaGAGAGCTCAGGACATTTGG +
Preference number: 2 (lower is better)
Translates to: LWGLNIHYESDWVISKLISLLDC*RAQDIW
Trigger: CCAAATGTCCTGAGCTCTCCAGCAGTCAAGTAGTGA...AATGAGTTTGCTTATTACCCAGTCACTTTCGTAGTGAATGTTCAAACCCCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR CAA 90 bp GGTAATGAGTGTGGAACTTGTATACTCAAGAGAGCTTTTCCTTCATaGTCAGGAGAGCTCAAAATCCTAAGAGGCCCTTCTGTTTATAAC +
Preference number: 2 (lower is better)
Translates to: GNECGTCILKRAFPS*SGELKILRGPSVYN
Trigger: GTTATAAACAGAAGGGCCTCTTAGGATTTTGAGCTCTCCTGACAATGAAGGAAAAGCTCTCTTGAGTATACAAGTTCCACACTCATTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR TCA 72 bp AGGAGAGCTGCAGCTGACCCTGGCACCTGTCCCCGATaGTGGCGGGAGCACTGCGCTGAGTCCCTGTCTTGC +
Preference number: 3 (lower is better)
Translates to: RRAAADPGTCPR*WREHCAESLSC
Trigger: GCAAGACAGGGACTCAGCGCAGTGCTCCCGCCATCATCGGGGACAGGTGCCAGGGTCAGCTGCAGCTCTCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR GCA 72 bp TCACACTGCGTCCACGGTGGGTGGACTTGGATGTGGTaGACGAGAAGGAGAGCACCTGTCCGTCTCCCTGAC +
Preference number: 3 (lower is better)
Translates to: SHCVHGGWTWMW*TRRRAPVRLPD
Trigger: GTCAGGGAGACGGACAGGTGCTCTCCTTCTCGTGCACCACATCCAAGTCCACCCACCGTGGACGCAGTGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR CCA 72 bp GCTGTGCAGGGCCTTGATCATCAGAAAGGGACTGGCTaGCAACCCCTAGCCACTCCTGTCGCTCTGGCCAGT +
Preference number: 3 (lower is better)
Translates to: AVQGLDHQKGTG*QPLATPVALAS
Trigger: ACTGGCCAGAGCGACAGGAGTGGCTAGGGGTTGCCAGCCAGTCCCTTTCTGATGATCAAGGCCCTGCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR TCA 72 bp GTGGTGCACGAGAAGGAGAGCACCTGTCCGTCTCCCTaGCATGCTTCTGGAAGAGGCTGCTGGGGATGTGGA +
Preference number: 3 (lower is better)
Translates to: VVHEKESTCPSP*HASGRGCWGCG
Trigger: TCCACATCCCCAGCAGCCTCTTCCAGAAGCATGTCAGGGAGACGGACAGGTGCTCTCCTTCTCGTGCACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR GCA 72 bp CCGCCATGGCTCATTCTTGGATTGATGGCTGCTGCCTaGCTGACAGACACACTAGGCAGAGGCGGAAGGGTC +
Preference number: 3 (lower is better)
Translates to: PPWLILGLMAAA*LTDTLGRGGRV
Trigger: GACCCTTCCGCCTCTGCCTAGTGTGTCTGTCAGGCAGGCAGCAGCCATCAATCCAAGAATGAGCCATGGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR GCA 72 bp GTGCTTGCCGCCATGGCTCATTCTTGGATTGATGGCTaGTGCCTGCCTGACAGACACACTAGGCAGAGGCGG +
Preference number: 3 (lower is better)
Translates to: VLAAMAHSWIDG*CLPDRHTRQRR
Trigger: CCGCCTCTGCCTAGTGTGTCTGTCAGGCAGGCAGCAGCCATCAATCCAAGAATGAGCCATGGCGGCAAGCAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR-3UTR CAA 90 bp AGAAAGTCAGACCCTAAAGATCAAACCCAGGGAGGCACCCTCTCCCCAGGCCAGGCTCTGGCCACTGCCTaGCAGCTCACAGCTGGTTCA +
Preference number: 3 (lower is better)
Translates to: RKSDPKDQTQGGTLSPGQALATA*QLTAGS
Trigger: TGAACCAGCTGTGAGCTGCAAGGCAGTGGCCAGAGC...CTGGCCTGGGGAGAGGGTGCCTCCCTGGGTTTGATCTTTAGGGTCTGACTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
3UTR TCA 72 bp CATCCCTGGGTTCTCCCACCCCAACGGAGGCACATCTaGGTCAACGACATCCACAGCTGTCTTCTTCGGCAC +
Preference number: 3 (lower is better)
Translates to: HPWVLPPQRRHI*VNDIHSCLLRH
Trigger: GTGCCGAAGAAGACAGCTGTGGATGTCGTTGACTCAGATGTGCCTCCGTTGGGGTGGGAGAACCCAGGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR GCA 72 bp CTTGCCGCCATGGCTCATTCTTGGATTGATGGCTGCTaGCTGCCTGACAGACACACTAGGCAGAGGCGGAAG +
Preference number: 3 (lower is better)
Translates to: LAAMAHSWIDGC*LPDRHTRQRRK
Trigger: CTTCCGCCTCTGCCTAGTGTGTCTGTCAGGCAGGCAGCAGCCATCAATCCAAGAATGAGCCATGGCGGCAAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR CCA 72 bp GGTCATACAGAGGGACTTTTGATGCTTCCAGCTAGATaGCAGGGGCATCCTGTGGCATCCTGCTGTGCAGGG +
Preference number: 3 (lower is better)
Translates to: GHTEGLLMLPAR*QGHPVASCCAG
Trigger: CCCTGCACAGCAGGATGCCACAGGATGCCCCTGCCATCTAGCTGGAAGCATCAAAAGTCCCTCTGTATGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR CCA 72 bp CTTCAAGGCCAGCATTTAGTCACACTGCGTCCACGGTaGGTGGACTTGGATGTGGTGCACGAGAAGGAGAGC +
Preference number: 3 (lower is better)
Translates to: LQGQHLVTLRPR*VDLDVVHEKES
Trigger: GCTCTCCTTCTCGTGCACCACATCCAAGTCCACCCACCGTGGACGCAGTGTGACTAAATGCTGGCCTTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR TCA 72 bp GTCTTATCGTCACCCTGCAGCCCCACTTTCTCATCCTaGCAACCCTCTTTCCCACACCGGGTCATACAGAGG +
Preference number: 3 (lower is better)
Translates to: VLSSPCSPTFSS*QPSFPHRVIQR
Trigger: CCTCTGTATGACCCGGTGTGGGAAAGAGGGTTGTCAGGATGAGAAAGTGGGGCTGCAGGGTGACGATAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR TCA 72 bp TCTTCTTCGGCACCATGCCGTGATGCCGCAGGAAAATaGTGTGCTATGGAACCAGCTACCTACCTGCCAGCG +
Preference number: 3 (lower is better)
Translates to: SSSAPCRDAAGK*CAMEPATYLPA
Trigger: CGCTGGCAGGTAGGTAGCTGGTTCCATAGCACATCATTTTCCTGCGGCATCACGGCATGGTGCCGAAGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR TCA 72 bp ACGACATCCACAGCTGTCTTCTTCGGCACCATGCCGTaGTGCCGCAGGAAAATGATGTGCTATGGAACCAGC +
Preference number: 3 (lower is better)
Translates to: TTSTAVFFGTMP*CRRKMMCYGTS
Trigger: GCTGGTTCCATAGCACATCATTTTCCTGCGGCATCACGGCATGGTGCCGAAGAAGACAGCTGTGGATGTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR TCA 72 bp GCTGTCTCCACAAGCGCCTTCACTCTCCTAGCTTCCTaGCCCTGCCATGCATCGGTTCTGTACACAACATCT +
Preference number: 3 (lower is better)
Translates to: AVSTSAFTLLAS*PCHASVLYTTS
Trigger: AGATGTTGTGTACAGAACCGATGCATGGCAGGGTCAGGAAGCTAGGAGAGTGAAGGCGCTTGTGGAGACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR GCA 72 bp GCCATGCAGGTGAAGAAAGGCACCAGCCCTGTTTCCTaGCTGAAGGGCAGCATCAAGGTCATAGTGTCCAAA +
Preference number: 3 (lower is better)
Translates to: AMQVKKGTSPVS*LKGSIKVIVSK
Trigger: TTTGGACACTATGACCTTGATGCTGCCCTTCAGGCAGGAAACAGGGCTGGTGCCTTTCTTCACCTGCATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
3UTR GCA 72 bp AACTCAGACCTCGGCTGGGTTCCTTTCTCCACACAGTaGTTGCCGCCATGGCTCATTCTTGGATTGATGGCT +
Preference number: 3 (lower is better)
Translates to: NSDLGWVPFSTQ*LPPWLILGLMA
Trigger: AGCCATCAATCCAAGAATGAGCCATGGCGGCAAGCACTGTGTGGAGAAAGGAACCCAGCCGAGGTCTGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR CCA 72 bp TTTCTCCACACAGTGCTTGCCGCCATGGCTCATTCTTaGATTGATGGCTGCTGCCTGCCTGACAGACACACT +
Preference number: 3 (lower is better)
Translates to: FLHTVLAAMAHS*IDGCCLPDRHT
Trigger: AGTGTGTCTGTCAGGCAGGCAGCAGCCATCAATCCAAGAATGAGCCATGGCGGCAAGCACTGTGTGGAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR-3UTR CAA 90 bp GGCTGGGTTCCTTTCTCCACACAGTGCTTGCCGCCATGGCTCATTCTTGGATTGGCTTCCGTGTTTCATTaGCTACAGAGCTGTCTCCAC +
Preference number: 3 (lower is better)
Translates to: GWVPFSTQCLPPWLILGLASVFH*LQSCLH
Trigger: GTGGAGACAGCTCTGTAGCAAATGAAACACGGAAGC...CAATCCAAGAATGAGCCATGGCGGCAAGCACTGTGTGGAGAAAGGAACCCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR TCA 72 bp GCACAGAGAAGATGTCCCAACTCCCCAGTTTCTGTCTaGAACTCAGACCTCGGCTGGGTTCCTTTCTCCACA +
Preference number: 3 (lower is better)
Translates to: AQRRCPNSPVSV*NSDLGWVPFST
Trigger: TGTGGAGAAAGGAACCCAGCCGAGGTCTGAGTTTCAGACAGAAACTGGGGAGTTGGGACATCTTCTCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR CCA 72 bp TTAATCAGCCATGGCCTTCCAAAAAGTAGAGTGATGTaGCAGGCAAGACAGGGACAAGCAGGCCCACCTGGT +
Preference number: 3 (lower is better)
Translates to: LISHGLPKSRVM*QARQGQAGPPG
Trigger: ACCAGGTGGGCCTGCTTGTCCCTGTCTTGCCTGCCACATCACTCTACTTTTTGGAAGGCCATGGCTGATTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
3UTR CCA 72 bp ACCAGAGACACTGAGGGACCTGGACAACAGACAAGCTaGCTGAGGGTTTCTCTTCAAGGCCAGCATTTAGTC +
Preference number: 3 (lower is better)
Translates to: TRDTEGPGQQTS*LRVSLQGQHLV
Trigger: GACTAAATGCTGGCCTTGAAGAGAAACCCTCAGCCAGCTTGTCTGTTGTCCAGGTCCCTCAGTGTCTCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR GCA 72 bp ACACAAACACATTCCCGGAGGCTTCCGTGTTTCATTTaGTACAGAGCTGTCTCCACAAGCGCCTTCACTCTC +
Preference number: 3 (lower is better)
Translates to: TQTHSRRLPCFI*YRAVSTSAFTL
Trigger: GAGAGTGAAGGCGCTTGTGGAGACAGCTCTGTAGCAAATGAAACACGGAAGCCTCCGGGAATGTGTTTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR-3UTR CAA 90 bp ACTAGGGCCGAGCTTCTGAGAAGCCATCCAGATAGGCAAGGGAGAAGGGGAGGGGAAGAAAGCATTACCTaGGGAGTTACCATTTTGAAT +
Preference number: 3 (lower is better)
Translates to: TRAELLRSHPDRQGRRGGEESIT*GVTILN
Trigger: ATTCAAAATGGTAACTCCCAAGGTAATGCTTTCTTC...CCCTCCCCTTCTCCCTTGCCTATCTGGATGGCTTCTCAGAAGCTCGGCCCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
3UTR-3UTR CAA 90 bp GGCTTCCGTGTTTCATTTGCTACAGAGCTGTCTCCACAAGCGCCTTCACTCTCCAACTCTGCTTGTCCTTaGCAAGCCCATAGACAAACA +
Preference number: 3 (lower is better)
Translates to: GFRVSFATELSPQAPSLSNSACP*QAHRQT
Trigger: TGTTTGTCTATGGGCTTGCAAAGGACAAGCAGAGTT...GGAGAGTGAAGGCGCTTGTGGAGACAGCTCTGTAGCAAATGAAACACGGAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR CCA 72 bp CAAGCCCATAGACAAACAGGCCATTCAAGTGCTCAATaGTCCCCACTGCTGTTCATGAGACCCACAGAGAAA +
Preference number: 3 (lower is better)
Translates to: QAHRQTGHSSAQ*SPLLFMRPTEK
Trigger: TTTCTCTGTGGGTCTCATGAACAGCAGTGGGGACCATTGAGCACTTGAATGGCCTGTTTGTCTATGGGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR CCA 72 bp GCCTGGCATCACGGAGACTCCAAGAGCCACGGACAATaGGAAAGAAGTGTACTTCTTGAATGCAATTCAAAG +
Preference number: 3 (lower is better)
Translates to: AWHHGDSKSHGQ*ERSVLLECNSK
Trigger: CTTTGAATTGCATTCAAGAAGTACACTTCTTTCCCATTGTCCGTGGCTCTTGGAGTCTCCGTGATGCCAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
3UTR-3UTR CAA 90 bp GGCTTCCGTGTTTCATTTGCTACAGAGCTGTCTCCACAAGCGCCTTCACTCTCCCATTTGCTTTGGGGTTaGAACATTCACTACGAAAGT +
Preference number: 3 (lower is better)
Translates to: GFRVSFATELSPQAPSLSHLLWG*NIHYES
Trigger: ACTTTCGTAGTGAATGTTCAAACCCCAAAGCAAATG...GGAGAGTGAAGGCGCTTGTGGAGACAGCTCTGTAGCAAATGAAACACGGAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR GCA 72 bp CAGGAAAATGATGTGCTATGGAACCAGCTACCTACCTaGCAGCGGTTAACTGCTCTAAGCCTCCACTTATTT +
Preference number: 3 (lower is better)
Translates to: QENDVLWNQLPT*QRLTALSLHLF
Trigger: AAATAAGTGGAGGCTTAGAGCAGTTAACCGCTGGCAGGTAGGTAGCTGGTTCCATAGCACATCATTTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR GCA 72 bp CTGACCCTGCCATGCATCGGTTCTGTACACAACATCTaGAGGTCCAAATACAGAGAGAATTTCAGCCTAAAG +
Preference number: 3 (lower is better)
Translates to: LTLPCIGSVHNI*RSKYRENFSLK
Trigger: CTTTAGGCTGAAATTCTCTCTGTATTTGGACCTGCAGATGTTGTGTACAGAACCGATGCATGGCAGGGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR GCA 72 bp AGTACAAAATGGGACTTAGGGGACTTTCCCACGGGATaGCTCAGAATACCAACACATGCAAGGGTTTCTTAT +
Preference number: 3 (lower is better)
Translates to: STKWDLGDFPTG*LRIPTHARVSY
Trigger: ATAAGAAACCCTTGCATGTGTTGGTATTCTGAGGCATCCCGTGGGAAAGTCCCCTAAGTCCCATTTTGTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR TCA 72 bp GAGCTCAAAATCCTAAGAGGCCCTTCTGTTTATAACTaGTTCTCGAAAGGTAGACAAAATTGCCTCTCTCTG +
Preference number: 3 (lower is better)
Translates to: ELKILRGPSVYN*FSKGRQNCLSL
Trigger: CAGAGAGAGGCAATTTTGTCTACCTTTCGAGAATCAGTTATAAACAGAAGGGCCTCTTAGGATTTTGAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR TCA 72 bp AGTCTGGACATTTCGCAGTCTCCAGGGAGAGGAATATaGCAGATGTATTTGGCACTAATGCTTAAATTATGC +
Preference number: 3 (lower is better)
Translates to: SLDISQSPGRGI*QMYLALMLKLC
Trigger: GCATAATTTAAGCATTAGTGCCAAATACATCTGTCATATTCCTCTCCCTGGAGACTGCGAAATGTCCAGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR-3UTR CAA 90 bp TTTTTCATCAACCATAATAAGTATGGTATCCATTCACTACTTGACTGCTGGAGACACCTCACCTTGTCTTaGTTTCGCAGCACAGACAGA +
Preference number: 3 (lower is better)
Translates to: FFINHNKYGIHSLLDCWRHLTLS*FRSTDR
Trigger: TCTGTCTGTGCTGCGAAACAAAGACAAGGTGAGGTG...TCTCCAGCAGTCAAGTAGTGAATGGATACCATACTTATTATGGTTGATGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR-3UTR CAA 90 bp TTTTTCATCAACCATAATAAGTATGGTATCCATTCACTACTTGACTGCTGGAGAAGGCCTCTAAAGCACTaGTTTACACATAGCCCTTCC +
Preference number: 3 (lower is better)
Translates to: FFINHNKYGIHSLLDCWRRPLKH*FTHSPS
Trigger: GGAAGGGCTATGTGTAAACAAGTGCTTTAGAGGCCT...TCTCCAGCAGTCAAGTAGTGAATGGATACCATACTTATTATGGTTGATGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR TCA 72 bp ACATTTGCTTTGGGGTTTGAACATTCACTACGAAAGTaGCTGGGTAATAAGCAAACTCATTCCAGGCTGTAT +
Preference number: 3 (lower is better)
Translates to: TFALGFEHSLRK*LGNKQTHSRLY
Trigger: ATACAGCCTGGAATGAGTTTGCTTATTACCCAGTCACTTTCGTAGTGAATGTTCAAACCCCAAAGCAAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR CCA 72 bp TTGCTTTGGGGTTTGAACATTCACTACGAAAGTGACTaGGTAATAAGCAAACTCATTCCAGGCTGTATTAAA +
Preference number: 3 (lower is better)
Translates to: LLWGLNIHYESD*VISKLIPGCIK
Trigger: TTTAATACAGCCTGGAATGAGTTTGCTTATTACCCAGTCACTTTCGTAGTGAATGTTCAAACCCCAAAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR GCA 90 bp CCGGAAGGAGAGCTGCAGCTGACCCTGGCACCTGTCCCCGATGATGGCGGGAGCGTGAGTAAGGGTGGCTaGACAGGTGAGCCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: PEGELQLTLAPVPDDGGSVSKGG*TGEPPA
Trigger: GGCAGGGGGCTCACCTGTGCAGCCACCCTTACTCAC...GCTCCCGCCATCATCGGGGACAGGTGCCAGGGTCAGCTGCAGCTCTCCTTCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp AGTGCTGCCTCAGCAGTAGTGGGCTCTGGCCCCGCCAAGGCAGGGAGGACTAGGACCCTGCGGAGTTCCTaGCTTGCTGACCCCCATCCC +
Preference number: 4 (lower is better)
Translates to: SAASAVVGSGPAKAGRTRTLRSS*LADPHP
Trigger: GGGATGGGGGTCAGCAAGCCAGGAACTCCGCAGGGT...CCTAGTCCTCCCTGCCTTGGCGGGGCCAGAGCCCACTACTGCTGAGGCAGCACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR TCA 90 bp GTGGGCTCTGGCCCCGCCAAGGCAGGGAGGACTAGGGCCGAGCTTCTGAGAAGCTCTGACATGCCACACTaGTGGCCGGTCTGTCTCACC +
Preference number: 4 (lower is better)
Translates to: VGSGPAKAGRTRAELLRSSDMPH*WPVCLT
Trigger: GGTGAGACAGACCGGCCATCAGTGTGGCATGTCAGA...GCTTCTCAGAAGCTCGGCCCTAGTCCTCCCTGCCTTGGCGGGGCCAGAGCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR TCA 90 bp GTGGGCTCTGGCCCCGCCAAGGCAGGGAGGACTAGGGCCGAGCTTCTGAGAAGCACTGGAAGGGAGGGATaGGCTGCAACATGGCCTCAC +
Preference number: 4 (lower is better)
Translates to: VGSGPAKAGRTRAELLRSTGREG*AATWPH
Trigger: GTGAGGCCATGTTGCAGCTCATCCCTCCCTTCCAGT...GCTTCTCAGAAGCTCGGCCCTAGTCCTCCCTGCCTTGGCGGGGCCAGAGCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR TCA 90 bp GTGGGCTCTGGCCCCGCCAAGGCAGGGAGGACTAGGGCCGAGCTTCTGAGAAGCGTCTCCTCAGAGAGCTaGCTTCTGGGCATACGCATC +
Preference number: 4 (lower is better)
Translates to: VGSGPAKAGRTRAELLRSVSSES*LLGIRI
Trigger: GATGCGTATGCCCAGAAGTCAGCTCTCTGAGGAGAC...GCTTCTCAGAAGCTCGGCCCTAGTCCTCCCTGCCTTGGCGGGGCCAGAGCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR TCA 90 bp CCGGAAGGAGAGCTGCAGCTGACCCTGGCACCTGTCCCCGATGATGGCGGGAGCAGCCCTGTCAAATCCTaGCAGTTCCAGGCCTCCACT +
Preference number: 4 (lower is better)
Translates to: PEGELQLTLAPVPDDGGSSPVKS*QFQAST
Trigger: AGTGGAGGCCTGGAACTGTCAGGATTTGACAGGGCT...GCTCCCGCCATCATCGGGGACAGGTGCCAGGGTCAGCTGCAGCTCTCCTTCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR TCA 90 bp CCGGAAGGAGAGCTGCAGCTGACCCTGGCACCTGTCCCCGATGATGGCGGGAGCGAGCGATGGTGTCAATaGAGCCTGGCACAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: PEGELQLTLAPVPDDGGSERWCQ*SLAQRR
Trigger: TCTTCTCTGTGCCAGGCTTCATTGACACCATCGCTC...GCTCCCGCCATCATCGGGGACAGGTGCCAGGGTCAGCTGCAGCTCTCCTTCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR TCA 90 bp AGAAAGTCAGACCCTAAAGATCAAACCCAGGGAGGCACCCTCTCCCCAGGCCAGGGCACCTGTCCCCGATaGTGGCGGGAGCACTGCGCT +
Preference number: 4 (lower is better)
Translates to: RKSDPKDQTQGGTLSPGQGTCPR*WREHCA
Trigger: AGCGCAGTGCTCCCGCCATCATCGGGGACAGGTGCC...CTGGCCTGGGGAGAGGGTGCCTCCCTGGGTTTGATCTTTAGGGTCTGACTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR GCA 90 bp GGCTTCCGTGTTTCATTTGCTACAGAGCTGTCTCCACAAGCGCCTTCACTCTCCCGCCTCGGGGACAGCTaGCGCCGGGCGAGGAGGATG +
Preference number: 4 (lower is better)
Translates to: GFRVSFATELSPQAPSLSRLGDS*RRARRM
Trigger: CATCCTCCTCGCCCGGCGGCAGCTGTCCCCGAGGCG...GGAGAGTGAAGGCGCTTGTGGAGACAGCTCTGTAGCAAATGAAACACGGAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp AGTGCTGCCTCAGCAGTAGTGGGCTCTGGCCCCGCCAAGGCAGGGAGGACTAGGATGCTTCCAGCTAGATaGCAGGGGCATCCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: SAASAVVGSGPAKAGRTRMLPAR*QGHPVA
Trigger: TGCCACAGGATGCCCCTGCCATCTAGCTGGAAGCAT...CCTAGTCCTCCCTGCCTTGGCGGGGCCAGAGCCCACTACTGCTGAGGCAGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR TCA 90 bp GCGCTGAGTCCCTGTCTTGCCTGTGACTCCTCCTTCCCCGACCCTCGGCATTGGAATGTGATGGATGAGTaGGCGCCAGGTGTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: ALSPCLACDSSFPDPRHWNVMDE*APGVSS
Trigger: GGAGCTCACACCTGGCGCTCACTCATCCATCACATT...CCAATGCCGAGGGTCGGGGAAGGAGGAGTCACAGGCAAGACAGGGACTCAGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR TCA 90 bp AGTGCTGCCTCAGCAGTAGTGGGCTCTGGCCCCGCCAAGGCAGGGAGGACTAGGAATGGGATGCTACTGTaGGTAAGGGTGGCTGCACAG +
Preference number: 4 (lower is better)
Translates to: SAASAVVGSGPAKAGRTRNGMLL*VRVAAQ
Trigger: CTGTGCAGCCACCCTTACTCACAGTAGCATCCCATT...CCTAGTCCTCCCTGCCTTGGCGGGGCCAGAGCCCACTACTGCTGAGGCAGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR GCA 90 bp CCGGAAGGAGAGCTGCAGCTGACCCTGGCACCTGTCCCCGATGATGGCGGGAGCGGCTCTGACTCATTCTaGTCACAGTCGTTTGTCCAC +
Preference number: 4 (lower is better)
Translates to: PEGELQLTLAPVPDDGGSGSDSF*SQSFVH
Trigger: GTGGACAAACGACTGTGAGCAGAATGAGTCAGAGCC...GCTCCCGCCATCATCGGGGACAGGTGCCAGGGTCAGCTGCAGCTCTCCTTCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR GCA 90 bp GTGGGCTCTGGCCCCGCCAAGGCAGGGAGGACTAGGGCCGAGCTTCTGAGAAGCCAGCTGGTTCACACATaGATGCAAAGGGCAGGTAAC +
Preference number: 4 (lower is better)
Translates to: VGSGPAKAGRTRAELLRSQLVHT*MQRAGN
Trigger: GTTACCTGCCCTTTGCATGCATGTGTGAACCAGCTG...GCTTCTCAGAAGCTCGGCCCTAGTCCTCCCTGCCTTGGCGGGGCCAGAGCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR GCA 90 bp AGTGCTGCCTCAGCAGTAGTGGGCTCTGGCCCCGCCAAGGCAGGGAGGACTAGGTCTTCTTCGGCACCATaGCGTGATGCCGCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: SAASAVVGSGPAKAGRTRSSSAP*RDAAGK
Trigger: TTTTCCTGCGGCATCACGGCATGGTGCCGAAGAAGA...CCTAGTCCTCCCTGCCTTGGCGGGGCCAGAGCCCACTACTGCTGAGGCAGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR GCA 90 bp GGCAGGCAAGACAGGGACAAGCAGGCCCACCTGGTAAAGGATGGCTCTGACATTGCTGTGACAGCTGCCTaGCTCCCTCTGCTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: GRQDRDKQAHLVKDGSDIAVTAA*LPLLPG
Trigger: CCCAGGGAGCAGAGGGAGGCAGGCAGCTGTCACAGC...AATGTCAGAGCCATCCTTTACCAGGTGGGCCTGCTTGTCCCTGTCTTGCCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp CCGGAAGGAGAGCTGCAGCTGACCCTGGCACCTGTCCCCGATGATGGCGGGAGCCCAGGGGTCAAAGTCTaGAAAGGGTCTGTCTTCATC +
Preference number: 4 (lower is better)
Translates to: PEGELQLTLAPVPDDGGSPGVKV*KGSVFI
Trigger: GATGAAGACAGACCCTTTCCAGACTTTGACCCCTGG...GCTCCCGCCATCATCGGGGACAGGTGCCAGGGTCAGCTGCAGCTCTCCTTCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp GTGGGCTCTGGCCCCGCCAAGGCAGGGAGGACTAGGGCCGAGCTTCTGAGAAGCAGACCTTCCAGTGGGTaGTGTCGACATAGCCGATAT +
Preference number: 4 (lower is better)
Translates to: VGSGPAKAGRTRAELLRSRPSSG*CRHSRY
Trigger: ATATCGGCTATGTCGACACCACCCACTGGAAGGTCT...GCTTCTCAGAAGCTCGGCCCTAGTCCTCCCTGCCTTGGCGGGGCCAGAGCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR CCA 90 bp GTGGGCTCTGGCCCCGCCAAGGCAGGGAGGACTAGGGCCGAGCTTCTGAGAAGCTCTTCATCTTGGCAATaGCATGACCAGTGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: VGSGPAKAGRTRAELLRSSSSWQ*HDQWPA
Trigger: AGCTGGCCACTGGTCATGCCATTGCCAAGATGAAGA...GCTTCTCAGAAGCTCGGCCCTAGTCCTCCCTGCCTTGGCGGGGCCAGAGCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp GGCAGGCAAGACAGGGACAAGCAGGCCCACCTGGTAAAGGATGGCTCTGACATTGGCAGGGGCATCCTGTaGCATCCTGCTGTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: GRQDRDKQAHLVKDGSDIGRGIL*HPAVQG
Trigger: GCCCTGCACAGCAGGATGCCACAGGATGCCCCTGCC...AATGTCAGAGCCATCCTTTACCAGGTGGGCCTGCTTGTCCCTGTCTTGCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp GCGCTGAGTCCCTGTCTTGCCTGTGACTCCTCCTTCCCCGACCCTCGGCATTGGGGGTGGACTTGGATGTaGTGCACGAGAAGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: ALSPCLACDSSFPDPRHWGWTWM*CTRRRA
Trigger: TGCTCTCCTTCTCGTGCACCACATCCAAGTCCACCC...CCAATGCCGAGGGTCGGGGAAGGAGGAGTCACAGGCAAGACAGGGACTCAGCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp AGAAAGTCAGACCCTAAAGATCAAACCCAGGGAGGCACCCTCTCCCCAGGCCAGCCTCCCTCTGCTCCCTaGGACCATCCAGGGCCACCA +
Preference number: 4 (lower is better)
Translates to: RKSDPKDQTQGGTLSPGQPPSAP*DHPGPP
Trigger: TGGTGGCCCTGGATGGTCCCAGGGAGCAGAGGGAGG...CTGGCCTGGGGAGAGGGTGCCTCCCTGGGTTTGATCTTTAGGGTCTGACTTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR TCA 90 bp GTGGGCTCTGGCCCCGCCAAGGCAGGGAGGACTAGGGCCGAGCTTCTGAGAAGCGACCCTTCTCAGCTGTaGGATTATGAACCCAAGGTT +
Preference number: 4 (lower is better)
Translates to: VGSGPAKAGRTRAELLRSDPSQL*DYEPKV
Trigger: AACCTTGGGTTCATAATCTCACAGCTGAGAAGGGTC...GCTTCTCAGAAGCTCGGCCCTAGTCCTCCCTGCCTTGGCGGGGCCAGAGCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359359.6
CDS-3UTR GCA 90 bp AGTGCTGCCTCAGCAGTAGTGGGCTCTGGCCCCGCCAAGGCAGGGAGGACTAGGGGCTCTGACTCATTCTaGTCACAGTCGTTTGTCCAC +
Preference number: 4 (lower is better)
Translates to: SAASAVVGSGPAKAGRTRGSDSF*SQSFVH
Trigger: GTGGACAAACGACTGTGAGCAGAATGAGTCAGAGCC...CCTAGTCCTCCCTGCCTTGGCGGGGCCAGAGCCCACTACTGCTGAGGCAGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR GCA 90 bp CCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTCGCCTCGGGGACAGCTaGCGCCGGGCGAGGAGGATG +
Preference number: 4 (lower is better)
Translates to: PLSTWFSALEAVPVHSSIRLGDS*RRARRM
Trigger: CATCCTCCTCGCCCGGCGGCAGCTGTCCCCGAGGCG...AATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355190.7
ENST00000373685.1
ENST00000480824.7
CDS-3UTR GCA 90 bp CCGGAAGGAGAGCTGCAGCTGACCCTGGCACCTGTCCCCGATGATGGCGGGAGCGACTTTCCCACGGGATaGCTCAGAATACCAACACAT +
Preference number: 4 (lower is better)
Translates to: PEGELQLTLAPVPDDGGSDFPTG*LRIPTH
Trigger: ATGTGTTGGTATTCTGAGGCATCCCGTGGGAAAGTC...GCTCCCGCCATCATCGGGGACAGGTGCCAGGGTCAGCTGCAGCTCTCCTTCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp AGTGCTGCCTCAGCAGTAGTGGGCTCTGGCCCCGCCAAGGCAGGGAGGACTAGGCCAGGGGTCAAAGTCTaGAAAGGGTCTGTCTTCATC +
Preference number: 4 (lower is better)
Translates to: SAASAVVGSGPAKAGRTRPGVKV*KGSVFI
Trigger: GATGAAGACAGACCCTTTCCAGACTTTGACCCCTGG...CCTAGTCCTCCCTGCCTTGGCGGGGCCAGAGCCCACTACTGCTGAGGCAGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR CCA 90 bp GCGCTGAGTCCCTGTCTTGCCTGTGACTCCTCCTTCCCCGACCCTCGGCATTGGGGAGGGAAGCCTGTCTaGATAAGATGGGGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: ALSPCLACDSSFPDPRHWGGKPV*IRWGFL
Trigger: CAGAAAGCCCCATCTTATCCAGACAGGCTTCCCTCC...CCAATGCCGAGGGTCGGGGAAGGAGGAGTCACAGGCAAGACAGGGACTCAGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR TCA 90 bp AGAAAGTCAGACCCTAAAGATCAAACCCAGGGAGGCACCCTCTCCCCAGGCCAGAGCTGGCCATGCAGGTaGAGAAAGGCACCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: RKSDPKDQTQGGTLSPGQSWPCR*RKAPAL
Trigger: CAGGGCTGGTGCCTTTCTTCACCTGCATGGCCAGCT...CTGGCCTGGGGAGAGGGTGCCTCCCTGGGTTTGATCTTTAGGGTCTGACTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR TCA 90 bp GCCATGCAGGTGAAGAAAGGCACCAGCCCTGTTTCCTGCCTGAAGGGCAGCATCTCATCGGAGTTTCACTaGAGCCCGTGGAGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: AMQVKKGTSPVSCLKGSISSEFH*SPWRRL
Trigger: GAGCCTCCTCCACGGGCTTCAGTGAAACTCCGATGA...GATGCTGCCCTTCAGGCAGGAAACAGGGCTGGTGCCTTTCTTCACCTGCATGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR TCA 90 bp GGCTTCCGTGTTTCATTTGCTACAGAGCTGTCTCCACAAGCGCCTTCACTCTCCAAGGAGAGCTGCAGCTaGCCCTGGCACCTGTCCCCG +
Preference number: 4 (lower is better)
Translates to: GFRVSFATELSPQAPSLSKESCS*PWHLSP
Trigger: CGGGGACAGGTGCCAGGGTCAGCTGCAGCTCTCCTT...GGAGAGTGAAGGCGCTTGTGGAGACAGCTCTGTAGCAAATGAAACACGGAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR GCA 90 bp GCCATGCAGGTGAAGAAAGGCACCAGCCCTGTTTCCTGCCTGAAGGGCAGCATCAAGGGAGGGATGAGCTaGAACATGGCCTCACCGCTG +
Preference number: 4 (lower is better)
Translates to: AMQVKKGTSPVSCLKGSIKGGMS*NMASPL
Trigger: CAGCGGTGAGGCCATGTTGCAGCTCATCCCTCCCTT...GATGCTGCCCTTCAGGCAGGAAACAGGGCTGGTGCCTTTCTTCACCTGCATGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR GCA 90 bp CCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTTCCGCCTCGGGGACAGCTaGCGCCGGGCGAGGAGGATG +
Preference number: 4 (lower is better)
Translates to: PFNLVFGSGSCSCAQFYFRLGDS*RRARRM
Trigger: CATCCTCCTCGCCCGGCGGCAGCTGTCCCCGAGGCG...GAAATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355190.7
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CCA 90 bp ACTCTAGCCTGGCATCACGGAGACTCCAAGAGCCACGGACAATGGGAAAGAAGTAGCAGTAGTGGGCTCTaGCCCCGCCAAGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: TLAWHHGDSKSHGQWERSSSSGL*PRQGRE
Trigger: CTCCCTGCCTTGGCGGGGCCAGAGCCCACTACTGCT...ACTTCTTTCCCATTGTCCGTGGCTCTTGGAGTCTCCGTGATGCCAGGCTAGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR CCA 90 bp AGTGCTGCCTCAGCAGTAGTGGGCTCTGGCCCCGCCAAGGCAGGGAGGACTAGGTTTCCTATTCTGAGCTaGCAGTTCGGAAACCACGTG +
Preference number: 4 (lower is better)
Translates to: SAASAVVGSGPAKAGRTRFPILS*QFGNHV
Trigger: CACGTGGTTTCCGAACTGCCAGCTCAGAATAGGAAA...CCTAGTCCTCCCTGCCTTGGCGGGGCCAGAGCCCACTACTGCTGAGGCAGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp CCGGAAGGAGAGCTGCAGCTGACCCTGGCACCTGTCCCCGATGATGGCGGGAGCGTGGAGACAGGAAAATaGCTGGACACAGTTGTGTTT +
Preference number: 4 (lower is better)
Translates to: PEGELQLTLAPVPDDGGSVETGK*LDTVVF
Trigger: AAACACAACTGTGTCCAGCCATTTTCCTGTCTCCAC...GCTCCCGCCATCATCGGGGACAGGTGCCAGGGTCAGCTGCAGCTCTCCTTCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp AGTGCTGCCTCAGCAGTAGTGGGCTCTGGCCCCGCCAAGGCAGGGAGGACTAGGCCTCTGTCACACATCTaGAAGAATGTGGAGACAGGA +
Preference number: 4 (lower is better)
Translates to: SAASAVVGSGPAKAGRTRPLSHI*KNVETG
Trigger: TCCTGTCTCCACATTCTTCCAGATGTGTGACAGAGG...CCTAGTCCTCCCTGCCTTGGCGGGGCCAGAGCCCACTACTGCTGAGGCAGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp GGGAGGCACCCTCTCCCCAGGCCAGCTACTCTAACTCATAACCCTCTGAAGACACTCCTGTCACCTCCCTaGAAGGGTCCACAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: GRHPLPRPATLTHNPLKTLLSPP*KGPQCW
Trigger: CCAGCACTGTGGACCCTTCCAGGGAGGTGACAGGAG...TGTCTTCAGAGGGTTATGAGTTAGAGTAGCTGGCCTGGGGAGAGGGTGCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR TCA 90 bp AGAAAGTCAGACCCTAAAGATCAAACCCAGGGAGGCACCCTCTCCCCAGGCCAGGCCCTGTTTCCTGCCTaGAGGGCAGCATCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: RKSDPKDQTQGGTLSPGQALFPA*RAASRS
Trigger: TGACCTTGATGCTGCCCTTCAGGCAGGAAACAGGGC...CTGGCCTGGGGAGAGGGTGCCTCCCTGGGTTTGATCTTTAGGGTCTGACTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR TCA 90 bp AGAAAGTCAGACCCTAAAGATCAAACCCAGGGAGGCACCCTCTCCCCAGGCCAGCTAGGGCCGAGCTTCTaGGAAGCCATCCAGATAGGC +
Preference number: 4 (lower is better)
Translates to: RKSDPKDQTQGGTLSPGQLGPSF*EAIQIG
Trigger: GCCTATCTGGATGGCTTCTCAGAAGCTCGGCCCTAG...CTGGCCTGGGGAGAGGGTGCCTCCCTGGGTTTGATCTTTAGGGTCTGACTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR TCA 90 bp AGTCAGACCCTAAAGATCAAACCCAGGGAGGCACCCTCTCCCCAGGCCAGCTACTTCGGCACCATGCCGTaGTGCCGCAGGAAAATGATG +
Preference number: 4 (lower is better)
Translates to: SQTLKIKPREAPSPQASYFGTMP*CRRKMM
Trigger: CATCATTTTCCTGCGGCATCACGGCATGGTGCCGAA...GTAGCTGGCCTGGGGAGAGGGTGCCTCCCTGGGTTTGATCTTTAGGGTCTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR GCA 90 bp AGTGCTGCCTCAGCAGTAGTGGGCTCTGGCCCCGCCAAGGCAGGGAGGACTAGGAATTGCCTCTCTCTGTaGAAACAGACATGCGCCTTT +
Preference number: 4 (lower is better)
Translates to: SAASAVVGSGPAKAGRTRNCLSL*KQTCAF
Trigger: AAAGGCGCATGTCTGTTTGCACAGAGAGAGGCAATT...CCTAGTCCTCCCTGCCTTGGCGGGGCCAGAGCCCACTACTGCTGAGGCAGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR GCA 90 bp CCGGAAGGAGAGCTGCAGCTGACCCTGGCACCTGTCCCCGATGATGGCGGGAGCCTAATGCTTAAATTATaGAGGGCAGGGAAACCAGAG +
Preference number: 4 (lower is better)
Translates to: PEGELQLTLAPVPDDGGSLMLKL*RAGKPE
Trigger: CTCTGGTTTCCCTGCCCTGCATAATTTAAGCATTAG...GCTCCCGCCATCATCGGGGACAGGTGCCAGGGTCAGCTGCAGCTCTCCTTCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp GCCATGCAGGTGAAGAAAGGCACCAGCCCTGTTTCCTGCCTGAAGGGCAGCATCCAATGTCTTCGGCACTaGAAGGGAGGGATGAGCTGC +
Preference number: 4 (lower is better)
Translates to: AMQVKKGTSPVSCLKGSIQCLRH*KGGMSC
Trigger: GCAGCTCATCCCTCCCTTCCAGTGCCGAAGACATTG...GATGCTGCCCTTCAGGCAGGAAACAGGGCTGGTGCCTTTCTTCACCTGCATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR CCA 90 bp ACTAGGGCCGAGCTTCTGAGAAGCCATCCAGATAGGCAAGGGAGAAGGGGAGGGCAATGTCTTCGGCACTaGAAGGGAGGGATGAGCTGC +
Preference number: 4 (lower is better)
Translates to: TRAELLRSHPDRQGRRGGQCLRH*KGGMSC
Trigger: GCAGCTCATCCCTCCCTTCCAGTGCCGAAGACATTG...CCCTCCCCTTCTCCCTTGCCTATCTGGATGGCTTCTCAGAAGCTCGGCCCTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR CCA 90 bp GGGAGGCACCCTCTCCCCAGGCCAGCTACTCTAACTCATAACCCTCTGAAGACACAGAAAGGGACTGGCTaGCAACCCCTAGCCACTCCT +
Preference number: 4 (lower is better)
Translates to: GRHPLPRPATLTHNPLKTQKGTG*QPLATP
Trigger: AGGAGTGGCTAGGGGTTGCCAGCCAGTCCCTTTCTG...TGTCTTCAGAGGGTTATGAGTTAGAGTAGCTGGCCTGGGGAGAGGGTGCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp GCCATGCAGGTGAAGAAAGGCACCAGCCCTGTTTCCTGCCTGAAGGGCAGCATCTCATCAGAAAGGGACTaGCTGGCAACCCCTAGCCAC +
Preference number: 4 (lower is better)
Translates to: AMQVKKGTSPVSCLKGSISSERD*LATPSH
Trigger: GTGGCTAGGGGTTGCCAGCCAGTCCCTTTCTGATGA...GATGCTGCCCTTCAGGCAGGAAACAGGGCTGGTGCCTTTCTTCACCTGCATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp CAGACTCTAGCCTGGCATCACGGAGACTCCAAGAGCCACGGACAATGGGAAAGATGCGTCCACGGTGGGTaGACTTGGATGTGGTGCACG +
Preference number: 4 (lower is better)
Translates to: QTLAWHHGDSKSHGQWERCVHGG*TWMWCT
Trigger: CGTGCACCACATCCAAGTCCACCCACCGTGGACGCA...TCTTTCCCATTGTCCGTGGCTCTTGGAGTCTCCGTGATGCCAGGCTAGAGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp AGAAAGTCAGACCCTAAAGATCAAACCCAGGGAGGCACCCTCTCCCCAGGCCAGACACTGCGTCCACGGTaGGTGGACTTGGATGTGGTG +
Preference number: 4 (lower is better)
Translates to: RKSDPKDQTQGGTLSPGQTLRPR*VDLDVV
Trigger: CACCACATCCAAGTCCACCCACCGTGGACGCAGTGT...CTGGCCTGGGGAGAGGGTGCCTCCCTGGGTTTGATCTTTAGGGTCTGACTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR TCA 90 bp AGTCAGACCCTAAAGATCAAACCCAGGGAGGCACCCTCTCCCCAGGCCAGCTACAATCTGCAGGTTCTGTaGTCCCCAGCTGCTGTGAGA +
Preference number: 4 (lower is better)
Translates to: SQTLKIKPREAPSPQASYNLQVL*SPAAVR
Trigger: TCTCACAGCAGCTGGGGATCACAGAACCTGCAGATT...GTAGCTGGCCTGGGGAGAGGGTGCCTCCCTGGGTTTGATCTTTAGGGTCTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359359.6
CDS-3UTR TCA 90 bp TGCCTGAAGGGCAGCATCAAGGTCATAGTGTCCAAAGGCCCGGAAGAGGTCAGTTCTGACATGCCACACTaGTGGCCGGTCTGTCTCACC +
Preference number: 4 (lower is better)
Translates to: CLKGSIKVIVSKGPEEVSSDMPH*WPVCLT
Trigger: GGTGAGACAGACCGGCCATCAGTGTGGCATGTCAGA...ACTGACCTCTTCCGGGCCTTTGGACACTATGACCTTGATGCTGCCCTTCAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR TCA 90 bp TTGCTGACCCCCATCCCTGGGTTCTCCCACCCCAACGGAGGCACATCTGAGTCATTCAATTGCCTTCTCTaGCATGCCACACTGATGGCC +
Preference number: 4 (lower is better)
Translates to: LLTPIPGFSHPNGGTSESFNCLL*HATLMA
Trigger: GGCCATCAGTGTGGCATGTCAGAGAAGGCAATTGAA...TGACTCAGATGTGCCTCCGTTGGGGTGGGAGAACCCAGGGATGGGGGTCAGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR TCA 90 bp GGCAGGCAAGACAGGGACAAGCAGGCCCACCTGGTAAAGGATGGCTCTGACATTAGGCTGAATCCTTCCTaGGCCACCTGCAGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: GRQDRDKQAHLVKDGSDIRLNPS*ATCRKS
Trigger: ACTCTTCCTGCAGGTGGCTCAGGAAGGATTCAGCCT...AATGTCAGAGCCATCCTTTACCAGGTGGGCCTGCTTGTCCCTGTCTTGCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR TCA 90 bp GGCAGGCAAGACAGGGACAAGCAGGCCCACCTGGTAAAGGATGGCTCTGACATTACTCTCCTAGCTTCCTaGCCCTGCCATGCATCGGTT +
Preference number: 4 (lower is better)
Translates to: GRQDRDKQAHLVKDGSDITLLAS*PCHASV
Trigger: AACCGATGCATGGCAGGGTCAGGAAGCTAGGAGAGT...AATGTCAGAGCCATCCTTTACCAGGTGGGCCTGCTTGTCCCTGTCTTGCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR GCA 90 bp CAGACTCTAGCCTGGCATCACGGAGACTCCAAGAGCCACGGACAATGGGAAAGATCTGGGCACAGCCAGTaGAGTTGGCAGGAATGGGCT +
Preference number: 4 (lower is better)
Translates to: QTLAWHHGDSKSHGQWERSGHSQ*SWQEWA
Trigger: AGCCCATTCCTGCCAACTGCACTGGCTGTGCCCAGA...TCTTTCCCATTGTCCGTGGCTCTTGGAGTCTCCGTGATGCCAGGCTAGAGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR GCA 90 bp TGCCTGAAGGGCAGCATCAAGGTCATAGTGTCCAAAGGCCCGGAAGAGGTCAGTTCTGGGCACAGCCAGTaGAGTTGGCAGGAATGGGCT +
Preference number: 4 (lower is better)
Translates to: CLKGSIKVIVSKGPEEVSSGHSQ*SWQEWA
Trigger: AGCCCATTCCTGCCAACTGCACTGGCTGTGCCCAGA...ACTGACCTCTTCCGGGCCTTTGGACACTATGACCTTGATGCTGCCCTTCAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR GCA 90 bp TTGCTGACCCCCATCCCTGGGTTCTCCCACCCCAACGGAGGCACATCTGAGTCACAGCTGGTTCACACATaGATGCAAAGGGCAGGTAAC +
Preference number: 4 (lower is better)
Translates to: LLTPIPGFSHPNGGTSESQLVHT*MQRAGN
Trigger: GTTACCTGCCCTTTGCATGCATGTGTGAACCAGCTG...TGACTCAGATGTGCCTCCGTTGGGGTGGGAGAACCCAGGGATGGGGGTCAGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR GCA 90 bp AGAAAGTCAGACCCTAAAGATCAAACCCAGGGAGGCACCCTCTCCCCAGGCCAGACCAGCCCTGTTTCCTaGCTGAAGGGCAGCATCAAG +
Preference number: 4 (lower is better)
Translates to: RKSDPKDQTQGGTLSPGQTSPVS*LKGSIK
Trigger: CTTGATGCTGCCCTTCAGGCAGGAAACAGGGCTGGT...CTGGCCTGGGGAGAGGGTGCCTCCCTGGGTTTGATCTTTAGGGTCTGACTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR GCA 90 bp AGAAAGTCAGACCCTAAAGATCAAACCCAGGGAGGCACCCTCTCCCCAGGCCAGTTAGAACCTGTTGGCTaGCCTCTCCACTGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: RKSDPKDQTQGGTLSPGQLEPVG*PLHCQG
Trigger: TCCCTGGCAGTGGAGAGGGCAGCCAACAGGTTCTAA...CTGGCCTGGGGAGAGGGTGCCTCCCTGGGTTTGATCTTTAGGGTCTGACTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR GCA 90 bp AGTCAGACCCTAAAGATCAAACCCAGGGAGGCACCCTCTCCCCAGGCCAGCTACTGGATTGATGGCTGCTaGCTGCCTGACAGACACACT +
Preference number: 4 (lower is better)
Translates to: SQTLKIKPREAPSPQASYWIDGC*LPDRHT
Trigger: AGTGTGTCTGTCAGGCAGGCAGCAGCCATCAATCCA...GTAGCTGGCCTGGGGAGAGGGTGCCTCCCTGGGTTTGATCTTTAGGGTCTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp GGGAGGCACCCTCTCCCCAGGCCAGCTACTCTAACTCATAACCCTCTGAAGACACACAGCCAGTGCAGTTaGCAGGAATGGGCTCTGACT +
Preference number: 4 (lower is better)
Translates to: GRHPLPRPATLTHNPLKTHSQCS*QEWALT
Trigger: AGTCAGAGCCCATTCCTGCCAACTGCACTGGCTGTG...TGTCTTCAGAGGGTTATGAGTTAGAGTAGCTGGCCTGGGGAGAGGGTGCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR CCA 90 bp AGAAAGTCAGACCCTAAAGATCAAACCCAGGGAGGCACCCTCTCCCCAGGCCAGCACAGCCAGTGCAGTTaGCAGGAATGGGCTCTGACT +
Preference number: 4 (lower is better)
Translates to: RKSDPKDQTQGGTLSPGQHSQCS*QEWALT
Trigger: AGTCAGAGCCCATTCCTGCCAACTGCACTGGCTGTG...CTGGCCTGGGGAGAGGGTGCCTCCCTGGGTTTGATCTTTAGGGTCTGACTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR CCA 90 bp TCAAACCCAGGGAGGCACCCTCTCCCCAGGCCAGCTACTCTAACTCATAACCCTGTCTCAGATGGGTGCTaGCAGAGTCCTAGCCAAGTG +
Preference number: 4 (lower is better)
Translates to: SNPGRHPLPRPATLTHNPVSDGC*QSPSQV
Trigger: CACTTGGCTAGGACTCTGCCAGCACCCATCTGAGAC...AGGGTTATGAGTTAGAGTAGCTGGCCTGGGGAGAGGGTGCCTCCCTGGGTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR CCA 90 bp GGCTGGGTTCCTTTCTCCACACAGTGCTTGCCGCCATGGCTCATTCTTGGATTGCACGGTGGGTGGACTTaGATGTGGTGCACGAGAAGG +
Preference number: 4 (lower is better)
Translates to: GWVPFSTQCLPPWLILGLHGGWT*MWCTRR
Trigger: CCTTCTCGTGCACCACATCCAAGTCCACCCACCGTG...CAATCCAAGAATGAGCCATGGCGGCAAGCACTGTGTGGAGAAAGGAACCCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR CAA 72 bp TCCACACAGTGCTTGCCGCCATGGCTCATTCTTGGATaGATGGCTGCTGCCTGCCTGACAGACACACTAGGC +
Preference number: 4 (lower is better)
Translates to: STQCLPPWLILG*MAAACLTDTLG
Trigger: GCCTAGTGTGTCTGTCAGGCAGGCAGCAGCCATCAATCCAAGAATGAGCCATGGCGGCAAGCACTGTGTGGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR TCA 90 bp AGTCAGACCCTAAAGATCAAACCCAGGGAGGCACCCTCTCCCCAGGCCAGCTACGATCCCCAGCTGCTGTaGGAGATCAATAGACACAAG +
Preference number: 4 (lower is better)
Translates to: SQTLKIKPREAPSPQASYDPQLL*EINRHK
Trigger: CTTGTGTCTATTGATCTCTCACAGCAGCTGGGGATC...GTAGCTGGCCTGGGGAGAGGGTGCCTCCCTGGGTTTGATCTTTAGGGTCTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359359.6
CDS-3UTR TCA 90 bp CAAGACAGGGACAAGCAGGCCCACCTGGTAAAGGATGGCTCTGACATTAGAACCGGCATGGCCACAGACTaGCAATGTCTTCGGCACTGG +
Preference number: 4 (lower is better)
Translates to: QDRDKQAHLVKDGSDIRTGMATD*QCLRHW
Trigger: CCAGTGCCGAAGACATTGTCAGTCTGTGGCCATGCC...GGTTCTAATGTCAGAGCCATCCTTTACCAGGTGGGCCTGCTTGTCCCTGTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR TCA 90 bp CAAGACAGGGACAAGCAGGCCCACCTGGTAAAGGATGGCTCTGACATTAGAACCGCCCTGTTTCCTGCCTaGAGGGCAGCATCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: QDRDKQAHLVKDGSDIRTALFPA*RAASRS
Trigger: TGACCTTGATGCTGCCCTTCAGGCAGGAAACAGGGC...GGTTCTAATGTCAGAGCCATCCTTTACCAGGTGGGCCTGCTTGTCCCTGTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR TCA 90 bp ACTCTAGCCTGGCATCACGGAGACTCCAAGAGCCACGGACAATGGGAAAGAAGTCTAGGGCCGAGCTTCTaGGAAGCCATCCAGATAGGC +
Preference number: 4 (lower is better)
Translates to: TLAWHHGDSKSHGQWERSLGPSF*EAIQIG
Trigger: GCCTATCTGGATGGCTTCTCAGAAGCTCGGCCCTAG...ACTTCTTTCCCATTGTCCGTGGCTCTTGGAGTCTCCGTGATGCCAGGCTAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR TCA 90 bp GGGAGGCACCCTCTCCCCAGGCCAGCTACTCTAACTCATAACCCTCTGAAGACAAGGCTCCTCCAGGAATaGAGAGGGCTTCACAACCAT +
Preference number: 4 (lower is better)
Translates to: GRHPLPRPATLTHNPLKTRLLQE*RGLHNH
Trigger: ATGGTTGTGAAGCCCTCTTCATTCCTGGAGGAGCCT...TGTCTTCAGAGGGTTATGAGTTAGAGTAGCTGGCCTGGGGAGAGGGTGCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR TCA 90 bp GGCAGGCAAGACAGGGACAAGCAGGCCCACCTGGTAAAGGATGGCTCTGACATTAATGCCTGCTGCTGGTaGCACAAACACATTCCCGGA +
Preference number: 4 (lower is better)
Translates to: GRQDRDKQAHLVKDGSDINACCW*HKHIPG
Trigger: TCCGGGAATGTGTTTGTGTCACCAGCAGCAGGCATT...AATGTCAGAGCCATCCTTTACCAGGTGGGCCTGCTTGTCCCTGTCTTGCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR TCA 90 bp GGGAGGCACCCTCTCCCCAGGCCAGCTACTCTAACTCATAACCCTCTGAAGACAAACAGACAAGCTGGCTaGGGGTTTCTCTTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: GRHPLPRPATLTHNPLKTNRQAG*GFLFKA
Trigger: GGCCTTGAAGAGAAACCCTCAGCCAGCTTGTCTGTT...TGTCTTCAGAGGGTTATGAGTTAGAGTAGCTGGCCTGGGGAGAGGGTGCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR GCA 90 bp GGCTTCCGTGTTTCATTTGCTACAGAGCTGTCTCCACAAGCGCCTTCACTCTCCGCTTCTGGAAGAGGCTaGTGGGGATGTGGAGACTGG +
Preference number: 4 (lower is better)
Translates to: GFRVSFATELSPQAPSLSASGRG*WGCGDW
Trigger: CCAGTCTCCACATCCCCAGCAGCCTCTTCCAGAAGC...GGAGAGTGAAGGCGCTTGTGGAGACAGCTCTGTAGCAAATGAAACACGGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp AGAAAGTCAGACCCTAAAGATCAAACCCAGGGAGGCACCCTCTCCCCAGGCCAGAGCAGCGCCACCACTTaGCGAAAAACCCTTCAGAGA +
Preference number: 4 (lower is better)
Translates to: RKSDPKDQTQGGTLSPGQSSATT*RKTLQR
Trigger: TCTCTGAAGGGTTTTTCGCCAAGTGGTGGCGCTGCT...CTGGCCTGGGGAGAGGGTGCCTCCCTGGGTTTGATCTTTAGGGTCTGACTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR CCA 90 bp AGTCAGACCCTAAAGATCAAACCCAGGGAGGCACCCTCTCCCCAGGCCAGCTACCTGGCTCTATTGGCATaGCCACAGACTGACAATGTC +
Preference number: 4 (lower is better)
Translates to: SQTLKIKPREAPSPQASYLALLA*PQTDNV
Trigger: GACATTGTCAGTCTGTGGCCATGCCAATAGAGCCAG...GTAGCTGGCCTGGGGAGAGGGTGCCTCCCTGGGTTTGATCTTTAGGGTCTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR CCA 90 bp TCAAACCCAGGGAGGCACCCTCTCCCCAGGCCAGCTACTCTAACTCATAACCCTATCCCCTGGCTCTATTaGCATGGCCACAGACTGACA +
Preference number: 4 (lower is better)
Translates to: SNPGRHPLPRPATLTHNPIPWLY*HGHRLT
Trigger: TGTCAGTCTGTGGCCATGCCAATAGAGCCAGGGGAT...AGGGTTATGAGTTAGAGTAGCTGGCCTGGGGAGAGGGTGCCTCCCTGGGTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR CCA 90 bp TCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATAGGAGGGCGAGGCTCTaGCCACTGCCTTGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: SPFNLVFGSGSCSCAQFYRRARL*PLPCSS
Trigger: TGAGCTGCAAGGCAGTGGCCAGAGCCTCGCCCTCCT...ATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR CCA 90 bp CCGGAAGGAGAGCTGCAGCTGACCCTGGCACCTGTCCCCGATGATGGCGGGAGCCACTACGAAAGTGACTaGGTAATAAGCAAACTCATT +
Preference number: 4 (lower is better)
Translates to: PEGELQLTLAPVPDDGGSHYESD*VISKLI
Trigger: AATGAGTTTGCTTATTACCCAGTCACTTTCGTAGTG...GCTCCCGCCATCATCGGGGACAGGTGCCAGGGTCAGCTGCAGCTCTCCTTCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp CAAGACAGGGACAAGCAGGCCCACCTGGTAAAGGATGGCTCTGACATTAGAACCCCCAAGGAGCTGCTGTaGGGAGCGATGGTGTCAATG +
Preference number: 4 (lower is better)
Translates to: QDRDKQAHLVKDGSDIRTPKELL*GAMVSM
Trigger: CATTGACACCATCGCTCCCCACAGCAGCTCCTTGGG...GGTTCTAATGTCAGAGCCATCCTTTACCAGGTGGGCCTGCTTGTCCCTGTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR CAA 72 bp ACCCTCTTTCCCACACCGGGTCATACAGAGGGACTTTaGATGCTTCCAGCTAGATGGCAGGGGCATCCTGTG +
Preference number: 4 (lower is better)
Translates to: TLFPTPGHTEGL*MLPARWQGHPV
Trigger: CACAGGATGCCCCTGCCATCTAGCTGGAAGCATCAAAAGTCCCTCTGTATGACCCGGTGTGGGAAAGAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR CAA 72 bp TCAGACCTCGGCTGGGTTCCTTTCTCCACACAGTGCTaGCCGCCATGGCTCATTCTTGGATTGATGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SDLGWVPFSTQC*PPWLILGLMAA
Trigger: AGCAGCCATCAATCCAAGAATGAGCCATGGCGGCAAGCACTGTGTGGAGAAAGGAACCCAGCCGAGGTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR TCA 90 bp ATGAAGCCTGGCACAGAGAAGATGTCCCAACTCCCCAGTTTCTGTCTGAAACTCAGCTGGCCATGCAGGTaGAGAAAGGCACCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: MKPGTEKMSQLPSFCLKLSWPCR*RKAPAL
Trigger: CAGGGCTGGTGCCTTTCTTCACCTGCATGGCCAGCT...GAGTTTCAGACAGAAACTGGGGAGTTGGGACATCTTCTCTGTGCCAGGCTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR TCA 90 bp GGCAGGCAAGACAGGGACAAGCAGGCCCACCTGGTAAAGGATGGCTCTGACATTAGTTGTACACCCAGCTaGCAAACACTTTGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: GRQDRDKQAHLVKDGSDISCTPS*QTLWVW
Trigger: CCAGACCCAAAGTGTTTGTCAGCTGGGTGTACAACT...AATGTCAGAGCCATCCTTTACCAGGTGGGCCTGCTTGTCCCTGTCTTGCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR TCA 90 bp AGTCAGACCCTAAAGATCAAACCCAGGGAGGCACCCTCTCCCCAGGCCAGCTACTATCCATTCACTACTTaGCTGCTGGAGAGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: SQTLKIKPREAPSPQASYYPFTT*LLESSG
Trigger: TCCTGAGCTCTCCAGCAGTCAAGTAGTGAATGGATA...GTAGCTGGCCTGGGGAGAGGGTGCCTCCCTGGGTTTGATCTTTAGGGTCTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR TCA 90 bp GGCTTCCGTGTTTCATTTGCTACAGAGCTGTCTCCACAAGCGCCTTCACTCTCCCAACGGAGGCACATCTaGGTCAACGACATCCACAGC +
Preference number: 4 (lower is better)
Translates to: GFRVSFATELSPQAPSLSQRRHI*VNDIHS
Trigger: GCTGTGGATGTCGTTGACTCAGATGTGCCTCCGTTG...GGAGAGTGAAGGCGCTTGTGGAGACAGCTCTGTAGCAAATGAAACACGGAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR TCA 90 bp CTTTGCAAGCCCATAGACAAACAGGCCATTCAAGTGCTCAATGGTCCCCACTGCACCTGTCCGTCTCCCTaGCATGCTTCTGGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: LCKPIDKQAIQVLNGPHCTCPSP*HASGRG
Trigger: GCCTCTTCCAGAAGCATGTCAGGGAGACGGACAGGT...GCAGTGGGGACCATTGAGCACTTGAATGGCCTGTTTGTCTATGGGCTTGCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR GCA 90 bp CAAGACAGGGACAAGCAGGCCCACCTGGTAAAGGATGGCTCTGACATTAGAACCTTAGAACCTGTTGGCTaGCCTCTCCACTGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: QDRDKQAHLVKDGSDIRTLEPVG*PLHCQG
Trigger: TCCCTGGCAGTGGAGAGGGCAGCCAACAGGTTCTAA...GGTTCTAATGTCAGAGCCATCCTTTACCAGGTGGGCCTGCTTGTCCCTGTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR GCA 90 bp GGCTGGGTTCCTTTCTCCACACAGTGCTTGCCGCCATGGCTCATTCTTGGATTGGTCTTATCGTCACCCTaGAGCCCCACTTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: GWVPFSTQCLPPWLILGLVLSSP*SPTFSS
Trigger: GGATGAGAAAGTGGGGCTGCAGGGTGACGATAAGAC...CAATCCAAGAATGAGCCATGGCGGCAAGCACTGTGTGGAGAAAGGAACCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR GCA 90 bp CAAGACAGGGACAAGCAGGCCCACCTGGTAAAGGATGGCTCTGACATTAGAACCGGGAGGACAGGGAAATaGCTGCTGCTGGTGACACAA +
Preference number: 4 (lower is better)
Translates to: QDRDKQAHLVKDGSDIRTGRTGK*LLLVTQ
Trigger: TTGTGTCACCAGCAGCAGGCATTTCCCTGTCCTCCC...GGTTCTAATGTCAGAGCCATCCTTTACCAGGTGGGCCTGCTTGTCCCTGTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp GAAGAGGGCTTCACAACCATCTTCACTCGTCATTGTCTGCCTCTGATCCATAATAGCAGTAGTGGGCTCTaGCCCCGCCAAGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: EEGFTTIFTRHCLPLIHNSSSGL*PRQGRE
Trigger: CTCCCTGCCTTGGCGGGGCCAGAGCCCACTACTGCT...ATTATGGATCAGAGGCAGACAATGACGAGTGAAGATGGTTGTGAAGCCCTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp AGTGCTGCCTCAGCAGTAGTGGGCTCTGGCCCCGCCAAGGCAGGGAGGACTAGGCATACATTCTTCACATaGTGGAAGTCTTTACCAGTT +
Preference number: 4 (lower is better)
Translates to: SAASAVVGSGPAKAGRTRHTFFT*WKSLPV
Trigger: AACTGGTAAAGACTTCCACCATGTGAAGAATGTATG...CCTAGTCCTCCCTGCCTTGGCGGGGCCAGAGCCCACTACTGCTGAGGCAGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR TCA 90 bp CCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTTCTGACATGCCACACTaGTGGCCGGTCTGTCTCACC +
Preference number: 4 (lower is better)
Translates to: PLSTWFSALEAVPVHSSISDMPH*WPVCLT
Trigger: GGTGAGACAGACCGGCCATCAGTGTGGCATGTCAGA...AATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR TCA 90 bp TTCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATCTGACATGCCACACTaGTGGCCGGTCTGTCTCACC +
Preference number: 4 (lower is better)
Translates to: FPFQPGFRLWKLFLCTVLSDMPH*WPVCLT
Trigger: GGTGAGACAGACCGGCCATCAGTGTGGCATGTCAGA...TAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR TCA 90 bp CCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTGGCATGGCCACAGACTaGCAATGTCTTCGGCACTGG +
Preference number: 4 (lower is better)
Translates to: PLSTWFSALEAVPVHSSIGMATD*QCLRHW
Trigger: CCAGTGCCGAAGACATTGTCAGTCTGTGGCCATGCC...AATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR TCA 90 bp GGCTTCCGTGTTTCATTTGCTACAGAGCTGTCTCCACAAGCGCCTTCACTCTCCACCCACAACTGGAATTaGGCAGAGTCCCTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: GFRVSFATELSPQAPSLSTHNWN*AESLLC
Trigger: ACAGAGGAGGGACTCTGCTCAATTCCAGTTGTGGGT...GGAGAGTGAAGGCGCTTGTGGAGACAGCTCTGTAGCAAATGAAACACGGAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR TCA 90 bp CTCTGTAGTGGGAGGCCACATGAAAGTGAACCTAACTCATGTACAGAGGTCATCCTCGGCATTGGTTACTaGCCCTTCCCCAGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: LCSGRPHESEPNSCTEVILGIGY*PFPRVE
Trigger: CTCCACCCTGGGGAAGGGTCAGTAACCAATGCCGAG...GATGACCTCTGTACATGAGTTAGGTTCACTTTCATGTGGCCTCCCACTACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR GCA 90 bp TTTCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTTCTGGGCACAGCCAGTaGAGTTGGCAGGAATGGGCT +
Preference number: 4 (lower is better)
Translates to: FPLSTWFSALEAVPVHSSSGHSQ*SWQEWA
Trigger: AGCCCATTCCTGCCAACTGCACTGGCTGTGCCCAGA...AGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR GCA 90 bp CCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTTCTGGGCACAGCCAGTaGAGTTGGCAGGAATGGGCT +
Preference number: 4 (lower is better)
Translates to: PLSTWFSALEAVPVHSSISGHSQ*SWQEWA
Trigger: AGCCCATTCCTGCCAACTGCACTGGCTGTGCCCAGA...AATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR GCA 90 bp TTCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTAAAGGGAGGGATGAGCTaGAACATGGCCTCACCGCTG +
Preference number: 4 (lower is better)
Translates to: FPFQPGFRLWKLFLCTVLKGGMS*NMASPL
Trigger: CAGCGGTGAGGCCATGTTGCAGCTCATCCCTCCCTT...TAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR GCA 90 bp TCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATAAGGGAGGGATGAGCTaGAACATGGCCTCACCGCTG +
Preference number: 4 (lower is better)
Translates to: SPFNLVFGSGSCSCAQFYKGGMS*NMASPL
Trigger: CAGCGGTGAGGCCATGTTGCAGCTCATCCCTCCCTT...ATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR GCA 90 bp GGCTGGGTTCCTTTCTCCACACAGTGCTTGCCGCCATGGCTCATTCTTGGATTGAACCAGCTACCTACCTaGCAGCGGTTAACTGCTCTA +
Preference number: 4 (lower is better)
Translates to: GWVPFSTQCLPPWLILGLNQLPT*QRLTAL
Trigger: TAGAGCAGTTAACCGCTGGCAGGTAGGTAGCTGGTT...CAATCCAAGAATGAGCCATGGCGGCAAGCACTGTGTGGAGAAAGGAACCCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR GCA 90 bp AGTCAGACCCTAAAGATCAAACCCAGGGAGGCACCCTCTCCCCAGGCCAGCTACCTGTGCAAACAGACATaGGCCTTTCTCTCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: SQTLKIKPREAPSPQASYLCKQT*AFLSLS
Trigger: AGAAAGAGAGAGAAAGGCGCATGTCTGTTTGCACAG...GTAGCTGGCCTGGGGAGAGGGTGCCTCCCTGGGTTTGATCTTTAGGGTCTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR GCA 90 bp GAAGAGGGCTTCACAACCATCTTCACTCGTCATTGTCTGCCTCTGATCCATAATCCTGCCCCAAGGAGCTaGTGTGGGGAGCGATGGTGT +
Preference number: 4 (lower is better)
Translates to: EEGFTTIFTRHCLPLIHNPAPRS*CGERWC
Trigger: ACACCATCGCTCCCCACAGCAGCTCCTTGGGGCAGG...ATTATGGATCAGAGGCAGACAATGACGAGTGAAGATGGTTGTGAAGCCCTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp GGGAGGCACCCTCTCCCCAGGCCAGCTACTCTAACTCATAACCCTCTGAAGACATTTCCCCTTTCAACCTaGTTTTCGGCTCTGGAAGCT +
Preference number: 4 (lower is better)
Translates to: GRHPLPRPATLTHNPLKTFPLST*FSALEA
Trigger: AGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGAAA...TGTCTTCAGAGGGTTATGAGTTAGAGTAGCTGGCCTGGGGAGAGGGTGCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR CCA 90 bp TCAAACCCAGGGAGGCACCCTCTCCCCAGGCCAGCTACTCTAACTCATAACCCTCTTGCAGCTCACAGCTaGTTCACACATGCATGCAAA +
Preference number: 4 (lower is better)
Translates to: SNPGRHPLPRPATLTHNPLAAHS*FTHACK
Trigger: TTTGCATGCATGTGTGAACCAGCTGTGAGCTGCAAG...AGGGTTATGAGTTAGAGTAGCTGGCCTGGGGAGAGGGTGCCTCCCTGGGTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR CCA 90 bp AAGAAAGGCACCAGCCCTGTTTCCTGCCTGAAGGGCAGCATCAAGGTCATAGTGGTGGAGGTGGGGAGTTaGTTAGGTGGTCTTATCGTC +
Preference number: 4 (lower is better)
Translates to: KKGTSPVSCLKGSIKVIVVEVGS*LGGLIV
Trigger: GACGATAAGACCACCTAACCAACTCCCCACCTCCAC...CACTATGACCTTGATGCTGCCCTTCAGGCAGGAAACAGGGCTGGTGCCTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR TCA 90 bp GCCATGCAGGTGAAGAAAGGCACCAGCCCTGTTTCCTGCCTGAAGGGCAGCATCTCAGCTGTGAGATTATaGACCCAAGGTTTAAAGCTC +
Preference number: 4 (lower is better)
Translates to: AMQVKKGTSPVSCLKGSISAVRL*TQGLKL
Trigger: GAGCTTTAAACCTTGGGTTCATAATCTCACAGCTGA...GATGCTGCCCTTCAGGCAGGAAACAGGGCTGGTGCCTTTCTTCACCTGCATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359359.6
CDS-3UTR TCA 90 bp GGCAGGCAAGACAGGGACAAGCAGGCCCACCTGGTAAAGGATGGCTCTGACATTTCACAAAGTAGGCAGTaGGCAAGATTAATCCCAAGG +
Preference number: 4 (lower is better)
Translates to: GRQDRDKQAHLVKDGSDISQSRQ*ARLIPR
Trigger: CCTTGGGATTAATCTTGCTCACTGCCTACTTTGTGA...AATGTCAGAGCCATCCTTTACCAGGTGGGCCTGCTTGTCCCTGTCTTGCCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR TCA 90 bp TCAAACCCAGGGAGGCACCCTCTCCCCAGGCCAGCTACTCTAACTCATAACCCTCAGGTGCTAATGGGCTaGAAGGTTGAATCACAAAGT +
Preference number: 4 (lower is better)
Translates to: SNPGRHPLPRPATLTHNPQVLMG*KVESQS
Trigger: ACTTTGTGATTCAACCTTTCAGCCCATTAGCACCTG...AGGGTTATGAGTTAGAGTAGCTGGCCTGGGGAGAGGGTGCCTCCCTGGGTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR TCA 90 bp CCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTAATGTGATGGATGAGTaGGCGCCAGGTGTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: PLSTWFSALEAVPVHSSINVMDE*APGVSS
Trigger: GGAGCTCACACCTGGCGCTCACTCATCCATCACATT...AATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR TCA 90 bp CCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTTACTGGAAGGGAGGGATaGGCTGCAACATGGCCTCAC +
Preference number: 4 (lower is better)
Translates to: PFQPGFRLWKLFLCTVLFTGREG*AATWPH
Trigger: GTGAGGCCATGTTGCAGCTCATCCCTCCCTTCCAGT...AAATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR TCA 90 bp CCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTTCACTGGAAGGGAGGGATaGGCTGCAACATGGCCTCAC +
Preference number: 4 (lower is better)
Translates to: PFNLVFGSGSCSCAQFYFTGREG*AATWPH
Trigger: GTGAGGCCATGTTGCAGCTCATCCCTCCCTTCCAGT...GAAATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR TCA 90 bp CCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTTGGCATGGCCACAGACTaGCAATGTCTTCGGCACTGG +
Preference number: 4 (lower is better)
Translates to: PFQPGFRLWKLFLCTVLFGMATD*QCLRHW
Trigger: CCAGTGCCGAAGACATTGTCAGTCTGTGGCCATGCC...AAATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR TCA 90 bp AGAAAGTCAGACCCTAAAGATCAAACCCAGGGAGGCACCCTCTCCCCAGGCCAGTATTTCCTACAGTTCTaGGAAAGCGGTTCCATCGCA +
Preference number: 4 (lower is better)
Translates to: RKSDPKDQTQGGTLSPGQYFLQF*ESGSIA
Trigger: TGCGATGGAACCGCTTTCTCAGAACTGTAGGAAATA...CTGGCCTGGGGAGAGGGTGCCTCCCTGGGTTTGATCTTTAGGGTCTGACTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR TCA 90 bp TCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATCCCCACTGCTGTTCATaGGACCCACAGAGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: SPFNLVFGSGSCSCAQFYPHCCS*DPQRKR
Trigger: CCTCTTTCTCTGTGGGTCTCATGAACAGCAGTGGGG...ATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR TCA 90 bp AAATTATGCAGGGCAGGGAAACCAGAGACACTGAGGGACCTGGACAACAGACAACCGTGGAGGAGGCTCTaGTGTTTCTATCCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: KLCRAGKPETLRDLDNRQPWRRL*CFYPEL
Trigger: GAGCTCAGGATAGAAACATCAGAGCCTCCTCCACGG...TTGTCTGTTGTCCAGGTCCCTCAGTGTCTCTGGTTTCCCTGCCCTGCATAATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR TCA 90 bp TTCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATCCCCAGTTTCTGTCTaGAACTCAGACCTCGGCTGG +
Preference number: 4 (lower is better)
Translates to: FPFQPGFRLWKLFLCTVLSPVSV*NSDLGW
Trigger: CCAGCCGAGGTCTGAGTTTCAGACAGAAACTGGGGA...TAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR GCA 90 bp AGAAAGTCAGACCCTAAAGATCAAACCCAGGGAGGCACCCTCTCCCCAGGCCAGTCTTCATCACCCCCATaGAGAGGAACTCCCTTATTT +
Preference number: 4 (lower is better)
Translates to: RKSDPKDQTQGGTLSPGQSSSPP*RGTPLF
Trigger: AAATAAGGGAGTTCCTCTGCATGGGGGTGATGAAGA...CTGGCCTGGGGAGAGGGTGCCTCCCTGGGTTTGATCTTTAGGGTCTGACTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR GCA 90 bp ACTAGGGCCGAGCTTCTGAGAAGCCATCCAGATAGGCAAGGGAGAAGGGGAGGGTGGAAGCTGTTCCTGTaGACAGTTCTATTTCCTACA +
Preference number: 4 (lower is better)
Translates to: TRAELLRSHPDRQGRRGGWKLFL*TVLFPT
Trigger: TGTAGGAAATAGAACTGTGCACAGGAACAGCTTCCA...CCCTCCCCTTCTCCCTTGCCTATCTGGATGGCTTCTCAGAAGCTCGGCCCTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR GCA 90 bp AGGACTAGGGCCGAGCTTCTGAGAAGCCATCCAGATAGGCAAGGGAGAAGGGGATGGTTCACACATGCATaGAAAGGGCAGGTAACTAAG +
Preference number: 4 (lower is better)
Translates to: RTRAELLRSHPDRQGRRGWFTHA*KGQVTK
Trigger: CTTAGTTACCTGCCCTTTGCATGCATGTGTGAACCA...TCCCCTTCTCCCTTGCCTATCTGGATGGCTTCTCAGAAGCTCGGCCCTAGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR GCA 90 bp ATGAAGCCTGGCACAGAGAAGATGTCCCAACTCCCCAGTTTCTGTCTGAAACTCACCAGCCCTGTTTCCTaGCTGAAGGGCAGCATCAAG +
Preference number: 4 (lower is better)
Translates to: MKPGTEKMSQLPSFCLKLTSPVS*LKGSIK
Trigger: CTTGATGCTGCCCTTCAGGCAGGAAACAGGGCTGGT...GAGTTTCAGACAGAAACTGGGGAGTTGGGACATCTTCTCTGTGCCAGGCTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR GCA 90 bp TCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATACAATCTTGGCTCACTaGAATCTCCGCCTCCCCGGT +
Preference number: 4 (lower is better)
Translates to: SPFNLVFGSGSCSCAQFYTILAH*NLRLPG
Trigger: ACCGGGGAGGCGGAGATTGCAGTGAGCCAAGATTGT...ATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR GCA 90 bp AAGAAAGGCACCAGCCCTGTTTCCTGCCTGAAGGGCAGCATCAAGGTCATAGTGTTCCTGACCCTGCCATaGATCGGTTCTGTACACAAC +
Preference number: 4 (lower is better)
Translates to: KKGTSPVSCLKGSIKVIVFLTLP*IGSVHN
Trigger: GTTGTGTACAGAACCGATGCATGGCAGGGTCAGGAA...CACTATGACCTTGATGCTGCCCTTCAGGCAGGAAACAGGGCTGGTGCCTTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp AGGACTAGGGCCGAGCTTCTGAGAAGCCATCCAGATAGGCAAGGGAGAAGGGGACTGACATGTACTTCTTaGCAATGGGCAAGGACATCA +
Preference number: 4 (lower is better)
Translates to: RTRAELLRSHPDRQGRRGLTCTS*QWARTS
Trigger: TGATGTCCTTGCCCATTGCCAAGAAGTACATGTCAG...TCCCCTTCTCCCTTGCCTATCTGGATGGCTTCTCAGAAGCTCGGCCCTAGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR CCA 90 bp TCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATCACAGCCAGTGCAGTTaGCAGGAATGGGCTCTGACT +
Preference number: 4 (lower is better)
Translates to: SPFNLVFGSGSCSCAQFYHSQCS*QEWALT
Trigger: AGTCAGAGCCCATTCCTGCCAACTGCACTGGCTGTG...ATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CCA 90 bp TCAAACCCAGGGAGGCACCCTCTCCCCAGGCCAGCTACTCTAACTCATAACCCTCGTCTTGATCACCAGTaGATGGAGCCTCTCAAATTT +
Preference number: 4 (lower is better)
Translates to: SNPGRHPLPRPATLTHNPRLDHQ*MEPLKF
Trigger: AAATTTGAGAGGCTCCATCCACTGGTGATCAAGACG...AGGGTTATGAGTTAGAGTAGCTGGCCTGGGGAGAGGGTGCCTCCCTGGGTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR CCA 90 bp CAGACTCTAGCCTGGCATCACGGAGACTCCAAGAGCCACGGACAATGGGAAAGACCATGGATAAGGAAATaGGAACCACCGCTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: QTLAWHHGDSKSHGQWERPWIRK*EPPLRK
Trigger: TTTCCTGAGCGGTGGTTCCCATTTCCTTATCCATGG...TCTTTCCCATTGTCCGTGGCTCTTGGAGTCTCCGTGATGCCAGGCTAGAGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR CCA 90 bp TTCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTACAATGTCTTCGGCACTaGAAGGGAGGGATGAGCTGC +
Preference number: 4 (lower is better)
Translates to: FPFQPGFRLWKLFLCTVLQCLRH*KGGMSC
Trigger: GCAGCTCATCCCTCCCTTCCAGTGCCGAAGACATTG...TAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CCA 90 bp CCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTCAATGTCTTCGGCACTaGAAGGGAGGGATGAGCTGC +
Preference number: 4 (lower is better)
Translates to: PLSTWFSALEAVPVHSSIQCLRH*KGGMSC
Trigger: GCAGCTCATCCCTCCCTTCCAGTGCCGAAGACATTG...AATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CCA 90 bp AAGAAAGGCACCAGCCCTGTTTCCTGCCTGAAGGGCAGCATCAAGGTCATAGTGAGACCTTCCAGTGGGTaGTGTCGACATAGCCGATAT +
Preference number: 4 (lower is better)
Translates to: KKGTSPVSCLKGSIKVIVRPSSG*CRHSRY
Trigger: ATATCGGCTATGTCGACACCACCCACTGGAAGGTCT...CACTATGACCTTGATGCTGCCCTTCAGGCAGGAAACAGGGCTGGTGCCTTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR CCA 90 bp AGGACTAGGGCCGAGCTTCTGAGAAGCCATCCAGATAGGCAAGGGAGAAGGGGAGAAAATGATGTGCTATaGAACCAGCTACCTACCTGC +
Preference number: 4 (lower is better)
Translates to: RTRAELLRSHPDRQGRRGENDVL*NQLPTC
Trigger: GCAGGTAGGTAGCTGGTTCCATAGCACATCATTTTC...TCCCCTTCTCCCTTGCCTATCTGGATGGCTTCTCAGAAGCTCGGCCCTAGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR TCA 90 bp GGGAGGCACCCTCTCCCCAGGCCAGCTACTCTAACTCATAACCCTCTGAAGACAGTTTGTCATAAATGCTaGTCTCGTTGGCAGCAAGAT +
Preference number: 4 (lower is better)
Translates to: GRHPLPRPATLTHNPLKTVCHKC*SRWQQD
Trigger: ATCTTGCTGCCAACGAGATCAGCATTTATGACAAAC...TGTCTTCAGAGGGTTATGAGTTAGAGTAGCTGGCCTGGGGAGAGGGTGCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR TCA 90 bp CCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTTAATGTGATGGATGAGTaGGCGCCAGGTGTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: PFQPGFRLWKLFLCTVLFNVMDE*APGVSS
Trigger: GGAGCTCACACCTGGCGCTCACTCATCCATCACATT...AAATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR TCA 90 bp ACTCTAACTCATAACCCTCTGAAGACACTTGGTAAAGGCAACACAGCTGACGAGACTGGAAGGGAGGGATaGGCTGCAACATGGCCTCAC +
Preference number: 4 (lower is better)
Translates to: TLTHNPLKTLGKGNTADETGREG*AATWPH
Trigger: GTGAGGCCATGTTGCAGCTCATCCCTCCCTTCCAGT...CTCGTCAGCTGTGTTGCCTTTACCAAGTGTCTTCAGAGGGTTATGAGTTAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR TCA 90 bp CCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTCCCACTTTCTCATCCTaGCAACCCTCTTTCCCACAC +
Preference number: 4 (lower is better)
Translates to: PLSTWFSALEAVPVHSSIPTFSS*QPSFPH
Trigger: GTGTGGGAAAGAGGGTTGTCAGGATGAGAAAGTGGG...AATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR TCA 90 bp GCCATGCAGGTGAAGAAAGGCACCAGCCCTGTTTCCTGCCTGAAGGGCAGCATCCATTCACTACGAAAGTaGCTGGGTAATAAGCAAACT +
Preference number: 4 (lower is better)
Translates to: AMQVKKGTSPVSCLKGSIHSLRK*LGNKQT
Trigger: AGTTTGCTTATTACCCAGTCACTTTCGTAGTGAATG...GATGCTGCCCTTCAGGCAGGAAACAGGGCTGGTGCCTTTCTTCACCTGCATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR TCA 90 bp AGCTCTGTGAACTCTGCTTGTCCTTTGCAAGCCCATAGACAAACAGGCCATTCAGGAAACCAGAGACACTaGGGGACCTGGACAACAGAC +
Preference number: 4 (lower is better)
Translates to: SSVNSACPLQAHRQTGHSGNQRH*GTWTTD
Trigger: GTCTGTTGTCCAGGTCCCTCAGTGTCTCTGGTTTCC...TGAATGGCCTGTTTGTCTATGGGCTTGCAAAGGACAAGCAGAGTTCACAGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR GCA 90 bp ACTCTAGCCTGGCATCACGGAGACTCCAAGAGCCACGGACAATGGGAAAGAAGTGACACAAGTGGATCCTaGAGGTACCTTGCATGTTCA +
Preference number: 4 (lower is better)
Translates to: TLAWHHGDSKSHGQWERSDTSGS*RYLACS
Trigger: TGAACATGCAAGGTACCTGCAGGATCCACTTGTGTC...ACTTCTTTCCCATTGTCCGTGGCTCTTGGAGTCTCCGTGATGCCAGGCTAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359359.6
CDS-3UTR GCA 90 bp AGCTCTGTGAACTCTGCTTGTCCTTTGCAAGCCCATAGACAAACAGGCCATTCATTGATGGCTGCTGCCTaGCTGACAGACACACTAGGC +
Preference number: 4 (lower is better)
Translates to: SSVNSACPLQAHRQTGHSLMAAA*LTDTLG
Trigger: GCCTAGTGTGTCTGTCAGGCAGGCAGCAGCCATCAA...TGAATGGCCTGTTTGTCTATGGGCTTGCAAAGGACAAGCAGAGTTCACAGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR GCA 90 bp CCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTTCTTGGATTGATGGCTaGTGCCTGCCTGACAGACAC +
Preference number: 4 (lower is better)
Translates to: PLSTWFSALEAVPVHSSISWIDG*CLPDRH
Trigger: GTGTCTGTCAGGCAGGCAGCAGCCATCAATCCAAGA...AATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR GCA 90 bp TTTCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTCCTTTCTCCACACAGTaGTTGCCGCCATGGCTCATT +
Preference number: 4 (lower is better)
Translates to: FPLSTWFSALEAVPVHSSPFSTQ*LPPWLI
Trigger: AATGAGCCATGGCGGCAAGCACTGTGTGGAGAAAGG...AGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp GGCTGGGTTCCTTTCTCCACACAGTGCTTGCCGCCATGGCTCATTCTTGGATTGCTGACATGTACTTCTTaGCAATGGGCAAGGACATCA +
Preference number: 4 (lower is better)
Translates to: GWVPFSTQCLPPWLILGLLTCTS*QWARTS
Trigger: TGATGTCCTTGCCCATTGCCAAGAAGTACATGTCAG...CAATCCAAGAATGAGCCATGGCGGCAAGCACTGTGTGGAGAAAGGAACCCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp CCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTAGCAGCGCCACCACTTaGCGAAAAACCCTTCAGAGA +
Preference number: 4 (lower is better)
Translates to: PLSTWFSALEAVPVHSSISSATT*RKTLQR
Trigger: TCTCTGAAGGGTTTTTCGCCAAGTGGTGGCGCTGCT...AATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CCA 90 bp TTCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTAAGCAGCGCCACCACTTaGCGAAAAACCCTTCAGAGA +
Preference number: 4 (lower is better)
Translates to: FPFQPGFRLWKLFLCTVLSSATT*RKTLQR
Trigger: TCTCTGAAGGGTTTTTCGCCAAGTGGTGGCGCTGCT...TAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CCA 90 bp ACTCTAGCCTGGCATCACGGAGACTCCAAGAGCCACGGACAATGGGAAAGAAGTCAGAGGTCTCCTCCATaGATAAGGAAATGGGAACCA +
Preference number: 4 (lower is better)
Translates to: TLAWHHGDSKSHGQWERSQRSPP*IRKWEP
Trigger: TGGTTCCCATTTCCTTATCCATGGAGGAGACCTCTG...ACTTCTTTCCCATTGTCCGTGGCTCTTGGAGTCTCCGTGATGCCAGGCTAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR CCA 90 bp TGCCTGAAGGGCAGCATCAAGGTCATAGTGTCCAAAGGCCCGGAAGAGGTCAGTGGCATCTTTTGGAAATaGCAGGTGAGTGAAAACAGG +
Preference number: 4 (lower is better)
Translates to: CLKGSIKVIVSKGPEEVSGIFWK*QVSENR
Trigger: CCTGTTTTCACTCACCTGCCATTTCCAAAAGATGCC...ACTGACCTCTTCCGGGCCTTTGGACACTATGACCTTGATGCTGCCCTTCAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR CCA 90 bp TCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATATCCCCTGGCTCTATTaGCATGGCCACAGACTGACA +
Preference number: 4 (lower is better)
Translates to: SPFNLVFGSGSCSCAQFYIPWLY*HGHRLT
Trigger: TGTCAGTCTGTGGCCATGCCAATAGAGCCAGGGGAT...ATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CCA 90 bp CCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTATCCCCTGGCTCTATTaGCATGGCCACAGACTGACA +
Preference number: 4 (lower is better)
Translates to: PLSTWFSALEAVPVHSSIIPWLY*HGHRLT
Trigger: TGTCAGTCTGTGGCCATGCCAATAGAGCCAGGGGAT...AATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CCA 90 bp CCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTATAGCCGATATCCCCTaGCTCTATTGGCATGGCCAC +
Preference number: 4 (lower is better)
Translates to: PLSTWFSALEAVPVHSSIIADIP*LYWHGH
Trigger: GTGGCCATGCCAATAGAGCCAGGGGATATCGGCTAT...AATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CCA 90 bp CCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTCAGATGACCAAAGGCTaGACCCCTCTGGCTATAACG +
Preference number: 4 (lower is better)
Translates to: PLSTWFSALEAVPVHSSIQMTKG*TPLAIT
Trigger: CGTTATAGCCAGAGGGGTCCAGCCTTTGGTCATCTG...AATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CCA 90 bp TCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATCCTGGTTTTCGGCTCTaGAAGCTGTTCCTGTGCACA +
Preference number: 4 (lower is better)
Translates to: SPFNLVFGSGSCSCAQFYPGFRL*KLFLCT
Trigger: TGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGG...ATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CCA 90 bp TTCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTACCTGGTTTTCGGCTCTaGAAGCTGTTCCTGTGCACA +
Preference number: 4 (lower is better)
Translates to: FPFQPGFRLWKLFLCTVLPGFRL*KLFLCT
Trigger: TGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGG...TAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CCA 90 bp TTTCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTCCTGGTTTTCGGCTCTaGAAGCTGTTCCTGTGCACA +
Preference number: 4 (lower is better)
Translates to: FPLSTWFSALEAVPVHSSPGFRL*KLFLCT
Trigger: TGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGG...AGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CCA 90 bp ATGAAGCCTGGCACAGAGAAGATGTCCCAACTCCCCAGTTTCTGTCTGAAACTCCCTGGTTTTCGGCTCTaGAAGCTGTTCCTGTGCACA +
Preference number: 4 (lower is better)
Translates to: MKPGTEKMSQLPSFCLKLPGFRL*KLFLCT
Trigger: TGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGG...GAGTTTCAGACAGAAACTGGGGAGTTGGGACATCTTCTCTGTGCCAGGCTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp CAAGACAGGGACAAGCAGGCCCACCTGGTAAAGGATGGCTCTGACATTAGAACCCTTGCAGCTCACAGCTaGTTCACACATGCATGCAAA +
Preference number: 4 (lower is better)
Translates to: QDRDKQAHLVKDGSDIRTLAAHS*FTHACK
Trigger: TTTGCATGCATGTGTGAACCAGCTGTGAGCTGCAAG...GGTTCTAATGTCAGAGCCATCCTTTACCAGGTGGGCCTGCTTGTCCCTGTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR CCA 90 bp AGCTCTGTGAACTCTGCTTGTCCTTTGCAAGCCCATAGACAAACAGGCCATTCAGTCTCAGATGGGTGCTaGCAGAGTCCTAGCCAAGTG +
Preference number: 4 (lower is better)
Translates to: SSVNSACPLQAHRQTGHSVSDGC*QSPSQV
Trigger: CACTTGGCTAGGACTCTGCCAGCACCCATCTGAGAC...TGAATGGCCTGTTTGTCTATGGGCTTGCAAAGGACAAGCAGAGTTCACAGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp GGCAGGCAAGACAGGGACAAGCAGGCCCACCTGGTAAAGGATGGCTCTGACATTAAGAGCCACGGACAATaGGAAAGAAGTGTACTTCTT +
Preference number: 4 (lower is better)
Translates to: GRQDRDKQAHLVKDGSDIKSHGQ*ERSVLL
Trigger: AAGAAGTACACTTCTTTCCCATTGTCCGTGGCTCTT...AATGTCAGAGCCATCCTTTACCAGGTGGGCCTGCTTGTCCCTGTCTTGCCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR CCA 90 bp ACTCTAGCCTGGCATCACGGAGACTCCAAGAGCCACGGACAATGGGAAAGAAGTTCACTACTTGACTGCTaGAGAGCTCAGGACATTTGG +
Preference number: 4 (lower is better)
Translates to: TLAWHHGDSKSHGQWERSSLLDC*RAQDIW
Trigger: CCAAATGTCCTGAGCTCTCCAGCAGTCAAGTAGTGA...ACTTCTTTCCCATTGTCCGTGGCTCTTGGAGTCTCCGTGATGCCAGGCTAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp ACTAGGGCCGAGCTTCTGAGAAGCCATCCAGATAGGCAAGGGAGAAGGGGAGGGGCCCACCATCACGCCTaGGTAATTTTTGTATTTTTA +
Preference number: 4 (lower is better)
Translates to: TRAELLRSHPDRQGRRGGAHHHA*VIFVFL
Trigger: TAAAAATACAAAAATTACCCAGGCGTGATGGTGGGC...CCCTCCCCTTCTCCCTTGCCTATCTGGATGGCTTCTCAGAAGCTCGGCCCTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp GCCATGCAGGTGAAGAAAGGCACCAGCCCTGTTTCCTGCCTGAAGGGCAGCATCCTTTCTCCTATAACCTaGCTTTCTCCTTTATGGACA +
Preference number: 4 (lower is better)
Translates to: AMQVKKGTSPVSCLKGSILSPIT*LSPLWT
Trigger: TGTCCATAAAGGAGAAAGCCAGGTTATAGGAGAAAG...GATGCTGCCCTTCAGGCAGGAAACAGGGCTGGTGCCTTTCTTCACCTGCATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR CAA 72 bp GACACAAACACATTCCCGGAGGCTTCCGTGTTTCATTaGCTACAGAGCTGTCTCCACAAGCGCCTTCACTCT +
Preference number: 4 (lower is better)
Translates to: DTNTFPEASVFH*LQSCLHKRLHS
Trigger: AGAGTGAAGGCGCTTGTGGAGACAGCTCTGTAGCAAATGAAACACGGAAGCCTCCGGGAATGTGTTTGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR TCA 90 bp TTCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTCAATTGCCTTCTCTaGCATGCCACACTGATGGCC +
Preference number: 4 (lower is better)
Translates to: FPFQPGFRLWKLFLCTVLFNCLL*HATLMA
Trigger: GGCCATCAGTGTGGCATGTCAGAGAAGGCAATTGAA...TAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR TCA 90 bp TTTCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTTTCAATTGCCTTCTCTaGCATGCCACACTGATGGCC +
Preference number: 4 (lower is better)
Translates to: FPLSTWFSALEAVPVHSSFNCLL*HATLMA
Trigger: GGCCATCAGTGTGGCATGTCAGAGAAGGCAATTGAA...AGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR TCA 90 bp CCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTTTCAATTGCCTTCTCTaGCATGCCACACTGATGGCC +
Preference number: 4 (lower is better)
Translates to: PLSTWFSALEAVPVHSSIFNCLL*HATLMA
Trigger: GGCCATCAGTGTGGCATGTCAGAGAAGGCAATTGAA...AATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR TCA 90 bp CCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTTCCAACTCTGGCCAAAGTaGGCTTTGCTACAGGGGGAA +
Preference number: 4 (lower is better)
Translates to: PFNLVFGSGSCSCAQFYFQLWPK*ALLQGE
Trigger: TTCCCCCTGTAGCAAAGCTCACTTTGGCCAGAGTTG...GAAATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373685.1
CDS-3UTR TCA 90 bp ATGAAGCCTGGCACAGAGAAGATGTCCCAACTCCCCAGTTTCTGTCTGAAACTCTCCCTTGATCACAACTaGGCGGCTGAGAACTGGAAA +
Preference number: 4 (lower is better)
Translates to: MKPGTEKMSQLPSFCLKLSLDHN*AAENWK
Trigger: TTTCCAGTTCTCAGCCGCTCAGTTGTGATCAAGGGA...GAGTTTCAGACAGAAACTGGGGAGTTGGGACATCTTCTCTGTGCCAGGCTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR TCA 90 bp GCCATGCAGGTGAAGAAAGGCACCAGCCCTGTTTCCTGCCTGAAGGGCAGCATCAACTGCTTAACAACATaGCTTTCATACGTACACAAG +
Preference number: 4 (lower is better)
Translates to: AMQVKKGTSPVSCLKGSINCLTT*LSYVHK
Trigger: CTTGTGTACGTATGAAAGTCATGTTGTTAAGCAGTT...GATGCTGCCCTTCAGGCAGGAAACAGGGCTGGTGCCTTTCTTCACCTGCATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR TCA 90 bp ATGAAGCCTGGCACAGAGAAGATGTCCCAACTCCCCAGTTTCTGTCTGAAACTCGATGCCGCAGGAAAATaGTGTGCTATGGAACCAGCT +
Preference number: 4 (lower is better)
Translates to: MKPGTEKMSQLPSFCLKLDAAGK*CAMEPA
Trigger: AGCTGGTTCCATAGCACATCATTTTCCTGCGGCATC...GAGTTTCAGACAGAAACTGGGGAGTTGGGACATCTTCTCTGTGCCAGGCTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR TCA 90 bp CATTTGCTTTGGGGTTTGAACATTCACTACGAAAGTGACTGGGTAATAAGCAAAGCGGGAGCACTGCGCTaGGTCCCTGTCTTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: HLLWGLNIHYESDWVISKAGALR*VPVLPV
Trigger: CACAGGCAAGACAGGGACTCAGCGCAGTGCTCCCGC...TTTGCTTATTACCCAGTCACTTTCGTAGTGAATGTTCAAACCCCAAAGCAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR GCA 90 bp TGCCTGAAGGGCAGCATCAAGGTCATAGTGTCCAAAGGCCCGGAAGAGGTCAGTAAAGCTCCAAAGTTTTaGTGTAGTGTGGATGGCAAG +
Preference number: 4 (lower is better)
Translates to: CLKGSIKVIVSKGPEEVSKAPKF*CSVDGK
Trigger: CTTGCCATCCACACTACAGCAAAACTTTGGAGCTTT...ACTGACCTCTTCCGGGCCTTTGGACACTATGACCTTGATGCTGCCCTTCAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359359.6
CDS-3UTR GCA 90 bp CCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTTTTGCCTTCTCTGACATaGCACACTGATGGCCGGTCT +
Preference number: 4 (lower is better)
Translates to: PFQPGFRLWKLFLCTVLFLPSLT*HTDGRS
Trigger: AGACCGGCCATCAGTGTGGCATGTCAGAGAAGGCAA...AAATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR GCA 90 bp TTCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTAGGCTCTGACTCATTCTaGTCACAGTCGTTTGTCCAC +
Preference number: 4 (lower is better)
Translates to: FPFQPGFRLWKLFLCTVLGSDSF*SQSFVH
Trigger: GTGGACAAACGACTGTGAGCAGAATGAGTCAGAGCC...TAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR GCA 90 bp CCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTAAGGCTGTAAAAGCTTaGACAAAGCCGGCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: PLSTWFSALEAVPVHSSIKAVKA*TKPASR
Trigger: TCTGGAGGCCGGCTTTGTGCAAGCTTTTACAGCCTT...AATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR GCA 90 bp ACTCTAGCCTGGCATCACGGAGACTCCAAGAGCCACGGACAATGGGAAAGAAGTTTTAAAAACAAACCCTaGGGAGTTCCTGGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: TLAWHHGDSKSHGQWERSFKNKP*GVPGLL
Trigger: CAGCAAGCCAGGAACTCCGCAGGGTTTGTTTTTAAA...ACTTCTTTCCCATTGTCCGTGGCTCTTGGAGTCTCCGTGATGCCAGGCTAGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR GCA 90 bp GGGAGGCACCCTCTCCCCAGGCCAGCTACTCTAACTCATAACCCTCTGAAGACAAAAGGTAGACAAAATTaGCTCTCTCTGTGCAAACAG +
Preference number: 4 (lower is better)
Translates to: GRHPLPRPATLTHNPLKTKGRQN*LSLCKQ
Trigger: CTGTTTGCACAGAGAGAGGCAATTTTGTCTACCTTT...TGTCTTCAGAGGGTTATGAGTTAGAGTAGCTGGCCTGGGGAGAGGGTGCCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR GCA 90 bp CTTTGGGGTTTGAACATTCACTACGAAAGTGACTGGGTAATAAGCAAACTCATTAGGGCCACCACACCCTaGTCCCGGAAGGAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: LWGLNIHYESDWVISKLIRATTP*SRKESC
Trigger: GCAGCTCTCCTTCCGGGAGCAGGGTGTGGTGGCCCT...AATGAGTTTGCTTATTACCCAGTCACTTTCGTAGTGAATGTTCAAACCCCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp GGGAGGCACCCTCTCCCCAGGCCAGCTACTCTAACTCATAACCCTCTGAAGACAGAAAATCAAGAGTCCTaGAGCAGTTCCATAATACTC +
Preference number: 4 (lower is better)
Translates to: GRHPLPRPATLTHNPLKTENQES*SSSIIL
Trigger: GAGTATTATGGAACTGCTCCAGGACTCTTGATTTTC...TGTCTTCAGAGGGTTATGAGTTAGAGTAGCTGGCCTGGGGAGAGGGTGCCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359359.6
CDS-3UTR CCA 90 bp TGCCTGAAGGGCAGCATCAAGGTCATAGTGTCCAAAGGCCCGGAAGAGGTCAGTGTCTTTCTCTTTCTCTaGTGTTCTCAGACGATCCAA +
Preference number: 4 (lower is better)
Translates to: CLKGSIKVIVSKGPEEVSVFLFL*CSQTIQ
Trigger: TTGGATCGTCTGAGAACACCAGAGAAAGAGAAAGAC...ACTGACCTCTTCCGGGCCTTTGGACACTATGACCTTGATGCTGCCCTTCAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359359.6
CDS-3UTR CCA 90 bp ACTCTAACTCATAACCCTCTGAAGACACTTGGTAAAGGCAACACAGCTGACGAGACAGTTCCAGGAGTGTaGAGGGACCCTTCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: TLTHNPLKTLGKGNTADETVPGV*RDPSQL
Trigger: CAGCTGAGAAGGGTCCCTCCACACTCCTGGAACTGT...CTCGTCAGCTGTGTTGCCTTTACCAAGTGTCTTCAGAGGGTTATGAGTTAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359359.6
CDS-3UTR CCA 90 bp TTCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTACCAGGGGTCAAAGTCTaGAAAGGGTCTGTCTTCATC +
Preference number: 4 (lower is better)
Translates to: FPFQPGFRLWKLFLCTVLPGVKV*KGSVFI
Trigger: GATGAAGACAGACCCTTTCCAGACTTTGACCCCTGG...TAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CCA 90 bp TTTCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTCCAGGGGTCAAAGTCTaGAAAGGGTCTGTCTTCATC +
Preference number: 4 (lower is better)
Translates to: FPLSTWFSALEAVPVHSSPGVKV*KGSVFI
Trigger: GATGAAGACAGACCCTTTCCAGACTTTGACCCCTGG...AGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CCA 90 bp TCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTGCAGTTGGCAGGAATaGGCTCTGACTCATTCTGCT +
Preference number: 4 (lower is better)
Translates to: SPFNLVFGSGSCSCAQFYCSWQE*ALTHSA
Trigger: AGCAGAATGAGTCAGAGCCCATTCCTGCCAACTGCA...ATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CCA 90 bp TTTCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTCCTCTCAAATTTCCTTaGGGCGTCTTCCAGGAGCAT +
Preference number: 4 (lower is better)
Translates to: FPLSTWFSALEAVPVHSSPLKFP*GVFQEH
Trigger: ATGCTCCTGGAAGACGCCCCAAGGAAATTTGAGAGG...AGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CCA 90 bp CCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTCTGGCTCTATTGGCATaGCCACAGACTGACAATGTC +
Preference number: 4 (lower is better)
Translates to: PLSTWFSALEAVPVHSSILALLA*PQTDNV
Trigger: GACATTGTCAGTCTGTGGCCATGCCAATAGAGCCAG...AATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CCA 90 bp TTTCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTCTGGCTCTATTGGCATaGCCACAGACTGACAATGTC +
Preference number: 4 (lower is better)
Translates to: FPLSTWFSALEAVPVHSSLALLA*PQTDNV
Trigger: GACATTGTCAGTCTGTGGCCATGCCAATAGAGCCAG...AGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CCA 90 bp CCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTTATAGCCGATATCCCCTaGCTCTATTGGCATGGCCAC +
Preference number: 4 (lower is better)
Translates to: PFQPGFRLWKLFLCTVLFIADIP*LYWHGH
Trigger: GTGGCCATGCCAATAGAGCCAGGGGATATCGGCTAT...AAATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CCA 90 bp CCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTTCATAGCCGATATCCCCTaGCTCTATTGGCATGGCCAC +
Preference number: 4 (lower is better)
Translates to: PFNLVFGSGSCSCAQFYFIADIP*LYWHGH
Trigger: GTGGCCATGCCAATAGAGCCAGGGGATATCGGCTAT...GAAATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CCA 90 bp AGCTCTGTGAACTCTGCTTGTCCTTTGCAAGCCCATAGACAAACAGGCCATTCAATAGCCGATATCCCCTaGCTCTATTGGCATGGCCAC +
Preference number: 4 (lower is better)
Translates to: SSVNSACPLQAHRQTGHSIADIP*LYWHGH
Trigger: GTGGCCATGCCAATAGAGCCAGGGGATATCGGCTAT...TGAATGGCCTGTTTGTCTATGGGCTTGCAAAGGACAAGCAGAGTTCACAGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp TTTCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTAGACCTTCCAGTGGGTaGTGTCGACATAGCCGATAT +
Preference number: 4 (lower is better)
Translates to: FPLSTWFSALEAVPVHSSRPSSG*CRHSRY
Trigger: ATATCGGCTATGTCGACACCACCCACTGGAAGGTCT...AGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CCA 90 bp TCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATAGACCTTCCAGTGGGTaGTGTCGACATAGCCGATAT +
Preference number: 4 (lower is better)
Translates to: SPFNLVFGSGSCSCAQFYRPSSG*CRHSRY
Trigger: ATATCGGCTATGTCGACACCACCCACTGGAAGGTCT...ATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CCA 90 bp TCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATAATCAGACTCTAGCCTaGCATCACGGAGACTCCAAG +
Preference number: 4 (lower is better)
Translates to: SPFNLVFGSGSCSCAQFYNQTLA*HHGDSK
Trigger: CTTGGAGTCTCCGTGATGCCAGGCTAGAGTCTGATT...ATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR CCA 90 bp CCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTTCGGGGAGTTGGTTAGGTaGTCTTATCGTCACCCTGCA +
Preference number: 4 (lower is better)
Translates to: PFNLVFGSGSCSCAQFYFGELVR*SYRHPA
Trigger: TGCAGGGTGACGATAAGACCACCTAACCAACTCCCC...GAAATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp GGCTGGGTTCCTTTCTCCACACAGTGCTTGCCGCCATGGCTCATTCTTGGATTGAGAGCTCAGGACATTTaGACAGAATGCTTCAAACTG +
Preference number: 4 (lower is better)
Translates to: GWVPFSTQCLPPWLILGLRAQDI*TECFKL
Trigger: CAGTTTGAAGCATTCTGTCCAAATGTCCTGAGCTCT...CAATCCAAGAATGAGCCATGGCGGCAAGCACTGTGTGGAGAAAGGAACCCAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp CATTTGCTTTGGGGTTTGAACATTCACTACGAAAGTGACTGGGTAATAAGCAAAGCTGACCCCCATCCCTaGGTTCTCCCACCCCAACGG +
Preference number: 4 (lower is better)
Translates to: HLLWGLNIHYESDWVISKADPHP*VLPPQR
Trigger: CCGTTGGGGTGGGAGAACCCAGGGATGGGGGTCAGC...TTTGCTTATTACCCAGTCACTTTCGTAGTGAATGTTCAAACCCCAAAGCAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp CCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTCAGTGCTTGCCGCCATaGCTCATTCTTGGATTGATG +
Preference number: 4 (lower is better)
Translates to: PLSTWFSALEAVPVHSSIQCLPP*LILGLM
Trigger: CATCAATCCAAGAATGAGCCATGGCGGCAAGCACTG...AATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR TCA 90 bp ACTCTAGCCTGGCATCACGGAGACTCCAAGAGCCACGGACAATGGGAAAGAAGTGTTTGTCATAAATGCTaGTCTCGTTGGCAGCAAGAT +
Preference number: 4 (lower is better)
Translates to: TLAWHHGDSKSHGQWERSVCHKC*SRWQQD
Trigger: ATCTTGCTGCCAACGAGATCAGCATTTATGACAAAC...ACTTCTTTCCCATTGTCCGTGGCTCTTGGAGTCTCCGTGATGCCAGGCTAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR TCA 90 bp GGCAGGCAAGACAGGGACAAGCAGGCCCACCTGGTAAAGGATGGCTCTGACATTAACTCCCTTATTTTCTaGCATGTACTTCTTGGCAAT +
Preference number: 4 (lower is better)
Translates to: GRQDRDKQAHLVKDGSDINSLIF*HVLLGN
Trigger: ATTGCCAAGAAGTACATGTCAGAAAATAAGGGAGTT...AATGTCAGAGCCATCCTTTACCAGGTGGGCCTGCTTGTCCCTGTCTTGCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR TCA 90 bp TTCCACTTTGCTTGGGAAACTACAAGAACTTCTTTAATCAGCCATGGCCTTCCAGGCATGGCCACAGACTaGCAATGTCTTCGGCACTGG +
Preference number: 4 (lower is better)
Translates to: FHFAWETTRTSLISHGLPGMATD*QCLRHW
Trigger: CCAGTGCCGAAGACATTGTCAGTCTGTGGCCATGCC...TGGAAGGCCATGGCTGATTAAAGAAGTTCTTGTAGTTTCCCAAGCAAAGTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR TCA 90 bp CCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTTCAGTTGTACACCCAGCTaGCAAACACTTTGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: PFNLVFGSGSCSCAQFYFSCTPS*QTLWVW
Trigger: CCAGACCCAAAGTGTTTGTCAGCTGGGTGTACAACT...GAAATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR TCA 90 bp TCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATATACAGAGGGACTTTTaGTGCTTCCAGCTAGATGGC +
Preference number: 4 (lower is better)
Translates to: SPFNLVFGSGSCSCAQFYIQRDF*CFQLDG
Trigger: GCCATCTAGCTGGAAGCATCAAAAGTCCCTCTGTAT...ATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR TCA 90 bp AAGAAAGGCACCAGCCCTGTTTCCTGCCTGAAGGGCAGCATCAAGGTCATAGTGCCACCATGCCCAGCTTaGACCACTTTTATTTTATTC +
Preference number: 4 (lower is better)
Translates to: KKGTSPVSCLKGSIKVIVPPCPA*TTFILF
Trigger: GAATAAAATAAAAGTGGTTCAAGCTGGGCATGGTGG...CACTATGACCTTGATGCTGCCCTTCAGGCAGGAAACAGGGCTGGTGCCTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR TCA 90 bp TTTCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTGTGATGGGTCACCACTaGAAGGTAATGAGTGTGGAA +
Preference number: 4 (lower is better)
Translates to: FPLSTWFSALEAVPVHSSVMGHH*KVMSVE
Trigger: TTCCACACTCATTACCTTTCAGTGGTGACCCATCAC...AGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR GCA 90 bp TTTCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTTCTGTGATCCCCAGCTaGTGTGAGAGATCAATAGAC +
Preference number: 4 (lower is better)
Translates to: FPLSTWFSALEAVPVHSSSVIPS*CERSID
Trigger: GTCTATTGATCTCTCACAGCAGCTGGGGATCACAGA...AGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359359.6
CDS-3UTR GCA 90 bp CCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTTGGCTCTGACTCATTCTaGTCACAGTCGTTTGTCCAC +
Preference number: 4 (lower is better)
Translates to: PFQPGFRLWKLFLCTVLFGSDSF*SQSFVH
Trigger: GTGGACAAACGACTGTGAGCAGAATGAGTCAGAGCC...AAATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR GCA 90 bp TTCCACTTTGCTTGGGAAACTACAAGAACTTCTTTAATCAGCCATGGCCTTCCAAAGGGAGGGATGAGCTaGAACATGGCCTCACCGCTG +
Preference number: 4 (lower is better)
Translates to: FHFAWETTRTSLISHGLPKGGMS*NMASPL
Trigger: CAGCGGTGAGGCCATGTTGCAGCTCATCCCTCCCTT...TGGAAGGCCATGGCTGATTAAAGAAGTTCTTGTAGTTTCCCAAGCAAAGTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR GCA 90 bp CTTTGCAAGCCCATAGACAAACAGGCCATTCAAGTGCTCAATGGTCCCCACTGCACTCTGCTTGTCCTTTaGAAGCCCATAGACAAACAG +
Preference number: 4 (lower is better)
Translates to: LCKPIDKQAIQVLNGPHCTLLVL*KPIDKQ
Trigger: CTGTTTGTCTATGGGCTTGCAAAGGACAAGCAGAGT...GCAGTGGGGACCATTGAGCACTTGAATGGCCTGTTTGTCTATGGGCTTGCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR GCA 90 bp CTTTGCAAGCCCATAGACAAACAGGCCATTCAAGTGCTCAATGGTCCCCACTGCGACATTTGGACAGAATaGTTCAAACTGGGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: LCKPIDKQAIQVLNGPHCDIWTE*FKLGPK
Trigger: CTTTGGCCCCAGTTTGAAGCATTCTGTCCAAATGTC...GCAGTGGGGACCATTGAGCACTTGAATGGCCTGTTTGTCTATGGGCTTGCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR GCA 90 bp GAAGAGGGCTTCACAACCATCTTCACTCGTCATTGTCTGCCTCTGATCCATAATTGGACTTGGATGTGGTaGACGAGAAGGAGAGCACCT +
Preference number: 4 (lower is better)
Translates to: EEGFTTIFTRHCLPLIHNWTWMW*TRRRAP
Trigger: AGGTGCTCTCCTTCTCGTGCACCACATCCAAGTCCA...ATTATGGATCAGAGGCAGACAATGACGAGTGAAGATGGTTGTGAAGCCCTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp CCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTTTGCAGTTGGCAGGAATaGGCTCTGACTCATTCTGCT +
Preference number: 4 (lower is better)
Translates to: PFQPGFRLWKLFLCTVLFCSWQE*ALTHSA
Trigger: AGCAGAATGAGTCAGAGCCCATTCCTGCCAACTGCA...AAATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CCA 90 bp CCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTTCTGCAGTTGGCAGGAATaGGCTCTGACTCATTCTGCT +
Preference number: 4 (lower is better)
Translates to: PFNLVFGSGSCSCAQFYFCSWQE*ALTHSA
Trigger: AGCAGAATGAGTCAGAGCCCATTCCTGCCAACTGCA...GAAATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CCA 90 bp CCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTTCCCTCTCAAATTTCCTTaGGGCGTCTTCCAGGAGCAT +
Preference number: 4 (lower is better)
Translates to: PFNLVFGSGSCSCAQFYFPLKFP*GVFQEH
Trigger: ATGCTCCTGGAAGACGCCCCAAGGAAATTTGAGAGG...GAAATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CCA 90 bp TTTCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTCCATGGATAAGGAAATaGGAACCACCGCTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: FPLSTWFSALEAVPVHSSPWIRK*EPPLRK
Trigger: TTTCCTGAGCGGTGGTTCCCATTTCCTTATCCATGG...AGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CCA 90 bp TTCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTACAGAGGTCTCCTCCATaGATAAGGAAATGGGAACCA +
Preference number: 4 (lower is better)
Translates to: FPFQPGFRLWKLFLCTVLQRSPP*IRKWEP
Trigger: TGGTTCCCATTTCCTTATCCATGGAGGAGACCTCTG...TAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CCA 90 bp TCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATCAGAGGTCTCCTCCATaGATAAGGAAATGGGAACCA +
Preference number: 4 (lower is better)
Translates to: SPFNLVFGSGSCSCAQFYQRSPP*IRKWEP
Trigger: TGGTTCCCATTTCCTTATCCATGGAGGAGACCTCTG...ATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CCA 90 bp CCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTTCCTGGCTCTATTGGCATaGCCACAGACTGACAATGTC +
Preference number: 4 (lower is better)
Translates to: PFNLVFGSGSCSCAQFYFLALLA*PQTDNV
Trigger: GACATTGTCAGTCTGTGGCCATGCCAATAGAGCCAG...GAAATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CCA 90 bp ACTCTAACTCATAACCCTCTGAAGACACTTGGTAAAGGCAACACAGCTGACGAGCAGATGACCAAAGGCTaGACCCCTCTGGCTATAACG +
Preference number: 4 (lower is better)
Translates to: TLTHNPLKTLGKGNTADEQMTKG*TPLAIT
Trigger: CGTTATAGCCAGAGGGGTCCAGCCTTTGGTCATCTG...CTCGTCAGCTGTGTTGCCTTTACCAAGTGTCTTCAGAGGGTTATGAGTTAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR CCA 90 bp GAAGAGGGCTTCACAACCATCTTCACTCGTCATTGTCTGCCTCTGATCCATAATCAGATGACCAAAGGCTaGACCCCTCTGGCTATAACG +
Preference number: 4 (lower is better)
Translates to: EEGFTTIFTRHCLPLIHNQMTKG*TPLAIT
Trigger: CGTTATAGCCAGAGGGGTCCAGCCTTTGGTCATCTG...ATTATGGATCAGAGGCAGACAATGACGAGTGAAGATGGTTGTGAAGCCCTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp TCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTTTCCCCTTTCAACCTaGTTTTCGGCTCTGGAAGCT +
Preference number: 4 (lower is better)
Translates to: SPFNLVFGSGSCSCAQFYFPLST*FSALEA
Trigger: AGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGAAA...ATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CCA 90 bp CCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTTTTCCCCTTTCAACCTaGTTTTCGGCTCTGGAAGCT +
Preference number: 4 (lower is better)
Translates to: PLSTWFSALEAVPVHSSIFPLST*FSALEA
Trigger: AGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGAAA...AATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CCA 90 bp GGCAGGCAAGACAGGGACAAGCAGGCCCACCTGGTAAAGGATGGCTCTGACATTAGGCACTTTGTAAACTaGAATGTACTAGACAAATGC +
Preference number: 4 (lower is better)
Translates to: GRQDRDKQAHLVKDGSDIRHFVN*NVLDKC
Trigger: GCATTTGTCTAGTACATTCCAGTTTACAAAGTGCCT...AATGTCAGAGCCATCCTTTACCAGGTGGGCCTGCTTGTCCCTGTCTTGCCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp AGAAAGTCAGACCCTAAAGATCAAACCCAGGGAGGCACCCTCTCCCCAGGCCAGCCTACTTTACAGGATTaGGTGAAGATTAAAGGAGAT +
Preference number: 4 (lower is better)
Translates to: RKSDPKDQTQGGTLSPGQPTLQD*VKIKGD
Trigger: ATCTCCTTTAATCTTCACCCAATCCTGTAAAGTAGG...CTGGCCTGGGGAGAGGGTGCCTCCCTGGGTTTGATCTTTAGGGTCTGACTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp CAAGACAGGGACAAGCAGGCCCACCTGGTAAAGGATGGCTCTGACATTAGAACCTTGCAGTGTGAAGAATaGGATGCTACTGTGAGTAAG +
Preference number: 4 (lower is better)
Translates to: QDRDKQAHLVKDGSDIRTLQCEE*DATVSK
Trigger: CTTACTCACAGTAGCATCCCATTCTTCACACTGCAA...GGTTCTAATGTCAGAGCCATCCTTTACCAGGTGGGCCTGCTTGTCCCTGTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR TCA 90 bp TCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTCACAAAGTAGGCAGTaGGCAAGATTAATCCCAAGG +
Preference number: 4 (lower is better)
Translates to: SPFNLVFGSGSCSCAQFYSQSRQ*ARLIPR
Trigger: CCTTGGGATTAATCTTGCTCACTGCCTACTTTGTGA...ATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR TCA 90 bp CCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTTCACAAAGTAGGCAGTaGGCAAGATTAATCCCAAGG +
Preference number: 4 (lower is better)
Translates to: PLSTWFSALEAVPVHSSISQSRQ*ARLIPR
Trigger: CCTTGGGATTAATCTTGCTCACTGCCTACTTTGTGA...AATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR TCA 90 bp TTCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTACAGGTGCTAATGGGCTaGAAGGTTGAATCACAAAGT +
Preference number: 4 (lower is better)
Translates to: FPFQPGFRLWKLFLCTVLQVLMG*KVESQS
Trigger: ACTTTGTGATTCAACCTTTCAGCCCATTAGCACCTG...TAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR TCA 90 bp ATGAAGCCTGGCACAGAGAAGATGTCCCAACTCCCCAGTTTCTGTCTGAAACTCCAGGTGCTAATGGGCTaGAAGGTTGAATCACAAAGT +
Preference number: 4 (lower is better)
Translates to: MKPGTEKMSQLPSFCLKLQVLMG*KVESQS
Trigger: ACTTTGTGATTCAACCTTTCAGCCCATTAGCACCTG...GAGTTTCAGACAGAAACTGGGGAGTTGGGACATCTTCTCTGTGCCAGGCTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR TCA 90 bp CCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTTATTTCCTACAGTTCTaGGAAAGCGGTTCCATCGCA +
Preference number: 4 (lower is better)
Translates to: PLSTWFSALEAVPVHSSIYFLQF*ESGSIA
Trigger: TGCGATGGAACCGCTTTCTCAGAACTGTAGGAAATA...AATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR TCA 90 bp TTCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATATTTCCTACAGTTCTaGGAAAGCGGTTCCATCGCA +
Preference number: 4 (lower is better)
Translates to: FPFQPGFRLWKLFLCTVLYFLQF*ESGSIA
Trigger: TGCGATGGAACCGCTTTCTCAGAACTGTAGGAAATA...TAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR TCA 90 bp TTTCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTTACAGGGGGAAGTTCTaGAGAGTTAGCCTGATTCTA +
Preference number: 4 (lower is better)
Translates to: FPLSTWFSALEAVPVHSSYRGKF*RVSLIL
Trigger: TAGAATCAGGCTAACTCTTCAGAACTTCCCCCTGTA...AGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373685.1
CDS-3UTR TCA 90 bp TCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATGTTATTTTCCTATTCTaGGCTGGCAGTTCGGAAACC +
Preference number: 4 (lower is better)
Translates to: SPFNLVFGSGSCSCAQFYVIFLF*AGSSET
Trigger: GGTTTCCGAACTGCCAGCTCAGAATAGGAAAATAAC...ATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR TCA 90 bp TTTCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTTTCTTTCCTTTCCTTTaGCAGAGTTTCGCTCTGTCG +
Preference number: 4 (lower is better)
Translates to: FPLSTWFSALEAVPVHSSFFPFL*QSFALS
Trigger: CGACAGAGCGAAACTCTGTCAAAGGAAAGGAAAGAA...AGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR TCA 90 bp CCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTTCAGGCTGTATTAAAATaGCTGAGGCCATCACCTGCA +
Preference number: 4 (lower is better)
Translates to: PFQPGFRLWKLFLCTVLFQAVLK*LRPSPA
Trigger: TGCAGGTGATGGCCTCAGTCATTTTAATACAGCCTG...AAATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR GCA 90 bp TCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTCTTCATCACCCCCATaGAGAGGAACTCCCTTATTT +
Preference number: 4 (lower is better)
Translates to: SPFNLVFGSGSCSCAQFYSSSPP*RGTPLF
Trigger: AAATAAGGGAGTTCCTCTGCATGGGGGTGATGAAGA...ATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR GCA 90 bp CCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTCTTCCGTGTTTCATTTaGTACAGAGCTGTCTCCACA +
Preference number: 4 (lower is better)
Translates to: PLSTWFSALEAVPVHSSILPCFI*YRAVST
Trigger: TGTGGAGACAGCTCTGTAGCAAATGAAACACGGAAG...AATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp TTTCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTGACCTTTTTGTTTACTaGAGCTGTTGTCCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: FPLSTWFSALEAVPVHSSDLFVY*SCCPLP
Trigger: AGGGAGAGGACAACAGCTCCAGTAAACAAAAAGGTC...AGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359359.6
CDS-3UTR CCA 90 bp TTCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTAATCAATAGACACAAGTaGATCCTGCAGGTACCTTGC +
Preference number: 4 (lower is better)
Translates to: FPFQPGFRLWKLFLCTVLINRHK*ILQVPC
Trigger: GCAAGGTACCTGCAGGATCCACTTGTGTCTATTGAT...TAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359359.6
CDS-3UTR CCA 90 bp CCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTCTGACATGTACTTCTTaGCAATGGGCAAGGACATCA +
Preference number: 4 (lower is better)
Translates to: PLSTWFSALEAVPVHSSILTCTS*QWARTS
Trigger: TGATGTCCTTGCCCATTGCCAAGAAGTACATGTCAG...AATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CCA 90 bp TTTCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTCTGACATGTACTTCTTaGCAATGGGCAAGGACATCA +
Preference number: 4 (lower is better)
Translates to: FPLSTWFSALEAVPVHSSLTCTS*QWARTS
Trigger: TGATGTCCTTGCCCATTGCCAAGAAGTACATGTCAG...AGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CCA 90 bp ACTCTAACTCATAACCCTCTGAAGACACTTGGTAAAGGCAACACAGCTGACGAGCCTCTCAAATTTCCTTaGGGCGTCTTCCAGGAGCAT +
Preference number: 4 (lower is better)
Translates to: TLTHNPLKTLGKGNTADEPLKFP*GVFQEH
Trigger: ATGCTCCTGGAAGACGCCCCAAGGAAATTTGAGAGG...CTCGTCAGCTGTGTTGCCTTTACCAAGTGTCTTCAGAGGGTTATGAGTTAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR CCA 90 bp TCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATCGTCTTGATCACCAGTaGATGGAGCCTCTCAAATTT +
Preference number: 4 (lower is better)
Translates to: SPFNLVFGSGSCSCAQFYRLDHQ*MEPLKF
Trigger: AAATTTGAGAGGCTCCATCCACTGGTGATCAAGACG...ATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CCA 90 bp CCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTTCCCATGGATAAGGAAATaGGAACCACCGCTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: PFNLVFGSGSCSCAQFYFPWIRK*EPPLRK
Trigger: TTTCCTGAGCGGTGGTTCCCATTTCCTTATCCATGG...GAAATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CCA 90 bp CCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTGGCATCTTTTGGAAATaGCAGGTGAGTGAAAACAGG +
Preference number: 4 (lower is better)
Translates to: PLSTWFSALEAVPVHSSIGIFWK*QVSENR
Trigger: CCTGTTTTCACTCACCTGCCATTTCCAAAAGATGCC...AATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CCA 90 bp TTTCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTGGCATCTTTTGGAAATaGCAGGTGAGTGAAAACAGG +
Preference number: 4 (lower is better)
Translates to: FPLSTWFSALEAVPVHSSGIFWK*QVSENR
Trigger: CCTGTTTTCACTCACCTGCCATTTCCAAAAGATGCC...AGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CCA 90 bp TTCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTAGGCATCTTTTGGAAATaGCAGGTGAGTGAAAACAGG +
Preference number: 4 (lower is better)
Translates to: FPFQPGFRLWKLFLCTVLGIFWK*QVSENR
Trigger: CCTGTTTTCACTCACCTGCCATTTCCAAAAGATGCC...TAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CCA 90 bp AGTTACCATTTTGAATTATTATATAATCAGACTCTAGCCTGGCATCACGGAGACAGGAGGGCGAGGCTCTaGCCACTGCCTTGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: SYHFELLYNQTLAWHHGDRRARL*PLPCSS
Trigger: TGAGCTGCAAGGCAGTGGCCAGAGCCTCGCCCTCCT...GTCTCCGTGATGCCAGGCTAGAGTCTGATTATATAATAATTCAAAATGGTAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR CCA 90 bp ACTCTAACTCATAACCCTCTGAAGACACTTGGTAAAGGCAACACAGCTGACGAGAATCAGACTCTAGCCTaGCATCACGGAGACTCCAAG +
Preference number: 4 (lower is better)
Translates to: TLTHNPLKTLGKGNTADENQTLA*HHGDSK
Trigger: CTTGGAGTCTCCGTGATGCCAGGCTAGAGTCTGATT...CTCGTCAGCTGTGTTGCCTTTACCAAGTGTCTTCAGAGGGTTATGAGTTAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR CCA 90 bp AGCTCTGTGAACTCTGCTTGTCCTTTGCAAGCCCATAGACAAACAGGCCATTCACATTCAAGTGCTCAATaGTCCCCACTGCTGTTCATG +
Preference number: 4 (lower is better)
Translates to: SSVNSACPLQAHRQTGHSHSSAQ*SPLLFM
Trigger: CATGAACAGCAGTGGGGACCATTGAGCACTTGAATG...TGAATGGCCTGTTTGTCTATGGGCTTGCAAAGGACAAGCAGAGTTCACAGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp TTCCACTTTGCTTGGGAAACTACAAGAACTTCTTTAATCAGCCATGGCCTTCCAAGCTTCCTGTGTAGCTaGGATTACAGGCGCCCACCA +
Preference number: 4 (lower is better)
Translates to: FHFAWETTRTSLISHGLPSFLCS*DYRRPP
Trigger: TGGTGGGCGCCTGTAATCCCAGCTACACAGGAAGCT...TGGAAGGCCATGGCTGATTAAAGAAGTTCTTGTAGTTTCCCAAGCAAAGTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp ACTCTAACTCATAACCCTCTGAAGACACTTGGTAAAGGCAACACAGCTGACGAGCAGGCTGGAATGAAGTaGCACAATCTTGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: TLTHNPLKTLGKGNTADEQAGMK*HNLGSL
Trigger: CAGTGAGCCAAGATTGTGCCACTTCATTCCAGCCTG...CTCGTCAGCTGTGTTGCCTTTACCAAGTGTCTTCAGAGGGTTATGAGTTAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp TTTCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTAGACAGGAAAATGGCTaGACACAGTTGTGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: FPLSTWFSALEAVPVHSSRQENG*TQLCFS
Trigger: GCTGAAACACAACTGTGTCCAGCCATTTTCCTGTCT...AGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR TCA 90 bp ACTCTAACTCATAACCCTCTGAAGACACTTGGTAAAGGCAACACAGCTGACGAGTACTCCTGTCTGCCCTaGCCTTTTTGTTTACTGGAG +
Preference number: 4 (lower is better)
Translates to: TLTHNPLKTLGKGNTADEYSCLP*PFCLLE
Trigger: CTCCAGTAAACAAAAAGGTCAGGGCAGACAGGAGTA...CTCGTCAGCTGTGTTGCCTTTACCAAGTGTCTTCAGAGGGTTATGAGTTAGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359359.6
CDS-3UTR TCA 90 bp CCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTGTTTGTCATAAATGCTaGTCTCGTTGGCAGCAAGAT +
Preference number: 4 (lower is better)
Translates to: PLSTWFSALEAVPVHSSIVCHKC*SRWQQD
Trigger: ATCTTGCTGCCAACGAGATCAGCATTTATGACAAAC...AATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR TCA 90 bp TTTCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTGTTTGTCATAAATGCTaGTCTCGTTGGCAGCAAGAT +
Preference number: 4 (lower is better)
Translates to: FPLSTWFSALEAVPVHSSVCHKC*SRWQQD
Trigger: ATCTTGCTGCCAACGAGATCAGCATTTATGACAAAC...AGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR TCA 90 bp CCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTTCTCACAAAGTAGGCAGTaGGCAAGATTAATCCCAAGG +
Preference number: 4 (lower is better)
Translates to: PFNLVFGSGSCSCAQFYFSQSRQ*ARLIPR
Trigger: CCTTGGGATTAATCTTGCTCACTGCCTACTTTGTGA...GAAATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR TCA 90 bp CCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTTCCAGGTGCTAATGGGCTaGAAGGTTGAATCACAAAGT +
Preference number: 4 (lower is better)
Translates to: PFNLVFGSGSCSCAQFYFQVLMG*KVESQS
Trigger: ACTTTGTGATTCAACCTTTCAGCCCATTAGCACCTG...GAAATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR TCA 90 bp TTTTTCATCAACCATAATAAGTATGGTATCCATTCACTACTTGACTGCTGGAGATCCCTGTCTTGCCTGTaGCTCCTCCTTCCCCGACCC +
Preference number: 4 (lower is better)
Translates to: FFINHNKYGIHSLLDCWRSLSCL*LLLPRP
Trigger: GGGTCGGGGAAGGAGGAGTCACAGGCAAGACAGGGA...TCTCCAGCAGTCAAGTAGTGAATGGATACCATACTTATTATGGTTGATGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR GCA 90 bp CCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTTCTCTTCATCACCCCCATaGAGAGGAACTCCCTTATTT +
Preference number: 4 (lower is better)
Translates to: PFNLVFGSGSCSCAQFYFSSSPP*RGTPLF
Trigger: AAATAAGGGAGTTCCTCTGCATGGGGGTGATGAAGA...GAAATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR GCA 90 bp TTCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATGGAAGCTGTTCCTGTaGACAGTTCTATTTCCTACA +
Preference number: 4 (lower is better)
Translates to: FPFQPGFRLWKLFLCTVLWKLFL*TVLFPT
Trigger: TGTAGGAAATAGAACTGTGCACAGGAACAGCTTCCA...TAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR GCA 90 bp CTCTGTAGTGGGAGGCCACATGAAAGTGAACCTAACTCATGTACAGAGGTCATCTTCAAGCAATTTTCCTaGCTCAGCTTCCTGTGTAGC +
Preference number: 4 (lower is better)
Translates to: LCSGRPHESEPNSCTEVIFKQFS*LSFLCS
Trigger: GCTACACAGGAAGCTGAGGCAGGAAAATTGCTTGAA...GATGACCTCTGTACATGAGTTAGGTTCACTTTCATGTGGCCTCCCACTACAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp TTCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTGATCACCAGTGGATaGAGCCTCTCAAATTTCCTT +
Preference number: 4 (lower is better)
Translates to: FPFQPGFRLWKLFLCTVLLITSG*SLSNFL
Trigger: AAGGAAATTTGAGAGGCTCCATCCACTGGTGATCAA...TAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CCA 90 bp CCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTTCCGTCTTGATCACCAGTaGATGGAGCCTCTCAAATTT +
Preference number: 4 (lower is better)
Translates to: PFNLVFGSGSCSCAQFYFRLDHQ*MEPLKF
Trigger: AAATTTGAGAGGCTCCATCCACTGGTGATCAAGACG...GAAATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CCA 90 bp CTCTGTAGTGGGAGGCCACATGAAAGTGAACCTAACTCATGTACAGAGGTCATCCGTCTTGATCACCAGTaGATGGAGCCTCTCAAATTT +
Preference number: 4 (lower is better)
Translates to: LCSGRPHESEPNSCTEVIRLDHQ*MEPLKF
Trigger: AAATTTGAGAGGCTCCATCCACTGGTGATCAAGACG...GATGACCTCTGTACATGAGTTAGGTTCACTTTCATGTGGCCTCCCACTACAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp CCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTTCGCTTTTTCTTCATCTTaGCAATGGCATGACCAGTGG +
Preference number: 4 (lower is better)
Translates to: PFNLVFGSGSCSCAQFYFAFSSS*QWHDQW
Trigger: CCACTGGTCATGCCATTGCCAAGATGAAGAAAAAGC...GAAATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp TTCCACTTTGCTTGGGAAACTACAAGAACTTCTTTAATCAGCCATGGCCTTCCACCACTCCTGTCGCTCTaGCCAGTAGTAGATTCTGCT +
Preference number: 4 (lower is better)
Translates to: FHFAWETTRTSLISHGLPPLLSL*PVVDSA
Trigger: AGCAGAATCTACTACTGGCCAGAGCGACAGGAGTGG...TGGAAGGCCATGGCTGATTAAAGAAGTTCTTGTAGTTTCCCAAGCAAAGTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR CAA 72 bp GTTTCTATCCTGAGCTCTGTGAACTCTGCTTGTCCTTaGCAAGCCCATAGACAAACAGGCCATTCAAGTGCT +
Preference number: 4 (lower is better)
Translates to: VSILSSVNSACP*QAHRQTGHSSA
Trigger: AGCACTTGAATGGCCTGTTTGTCTATGGGCTTGCAAAGGACAAGCAGAGTTCACAGAGCTCAGGATAGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR TCA 90 bp CCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTTTGGACATTTAAGATGTaGAGGGCAAGAGTGAAATGG +
Preference number: 4 (lower is better)
Translates to: PFQPGFRLWKLFLCTVLFWTFKM*RARVKW
Trigger: CCATTTCACTCTTGCCCTTCACATCTTAAATGTCCA...AAATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR TCA 90 bp TTCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTACTTTACAGGATTGGGTaGAGATTAAAGGAGATCATG +
Preference number: 4 (lower is better)
Translates to: FPFQPGFRLWKLFLCTVLLYRIG*RLKEIM
Trigger: CATGATCTCCTTTAATCTTCACCCAATCCTGTAAAG...TAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR TCA 90 bp TTCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTAGAATTGAAAAACAAGTaGTGTAAACTCCAAGGGGAC +
Preference number: 4 (lower is better)
Translates to: FPFQPGFRLWKLFLCTVLELKNK*CKLQGD
Trigger: GTCCCCTTGGAGTTTACATCACTTGTTTTTCAATTC...TAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR TCA 90 bp ACTCTAACTCATAACCCTCTGAAGACACTTGGTAAAGGCAACACAGCTGACGAGCCAGGGAGAGGAATATaGCAGATGTATTTGGCACTA +
Preference number: 4 (lower is better)
Translates to: TLTHNPLKTLGKGNTADEPGRGI*QMYLAL
Trigger: TAGTGCCAAATACATCTGTCATATTCCTCTCCCTGG...CTCGTCAGCTGTGTTGCCTTTACCAAGTGTCTTCAGAGGGTTATGAGTTAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR GCA 90 bp CCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTTCTGGAAGCTGTTCCTGTaGACAGTTCTATTTCCTACA +
Preference number: 4 (lower is better)
Translates to: PFNLVFGSGSCSCAQFYFWKLFL*TVLFPT
Trigger: TGTAGGAAATAGAACTGTGCACAGGAACAGCTTCCA...GAAATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR GCA 90 bp AGTTACCATTTTGAATTATTATATAATCAGACTCTAGCCTGGCATCACGGAGACCTCTGGCCACTGCCTTaGAGCTCACAGCTGGTTCAC +
Preference number: 4 (lower is better)
Translates to: SYHFELLYNQTLAWHHGDLWPLP*SSQLVH
Trigger: GTGAACCAGCTGTGAGCTGCAAGGCAGTGGCCAGAG...GTCTCCGTGATGCCAGGCTAGAGTCTGATTATATAATAATTCAAAATGGTAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR GCA 90 bp TTCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTACAGAATACCAACACATaGAAGGGTTTCTTATGGACA +
Preference number: 4 (lower is better)
Translates to: FPFQPGFRLWKLFLCTVLQNTNT*KGFLWT
Trigger: TGTCCATAAGAAACCCTTGCATGTGTTGGTATTCTG...TAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp TTCCACTTTGCTTGGGAAACTACAAGAACTTCTTTAATCAGCCATGGCCTTCCACCTCTCAAATTTCCTTaGGGCGTCTTCCAGGAGCAT +
Preference number: 4 (lower is better)
Translates to: FHFAWETTRTSLISHGLPPLKFP*GVFQEH
Trigger: ATGCTCCTGGAAGACGCCCCAAGGAAATTTGAGAGG...TGGAAGGCCATGGCTGATTAAAGAAGTTCTTGTAGTTTCCCAAGCAAAGTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR CCA 90 bp CCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTTCTTGATCACCAGTGGATaGAGCCTCTCAAATTTCCTT +
Preference number: 4 (lower is better)
Translates to: PFNLVFGSGSCSCAQFYFLITSG*SLSNFL
Trigger: AAGGAAATTTGAGAGGCTCCATCCACTGGTGATCAA...GAAATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CCA 90 bp TTTTTCATCAACCATAATAAGTATGGTATCCATTCACTACTTGACTGCTGGAGACCCGACCCTCGGCATTaGTTACTGACCCTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: FFINHNKYGIHSLLDCWRPDPRH*LLTLPQ
Trigger: CTGGGGAAGGGTCAGTAACCAATGCCGAGGGTCGGG...TCTCCAGCAGTCAAGTAGTGAATGGATACCATACTTATTATGGTTGATGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR TCA 90 bp TCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTTTAGATCCCATTCCTaGCACCATAAGCTTGAAAAT +
Preference number: 4 (lower is better)
Translates to: SPFNLVFGSGSCSCAQFYFRSHS*HHKLEN
Trigger: ATTTTCAAGCTTATGGTGTCAGGAATGGGATCTAAA...ATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000359359.6
CDS-3UTR TCA 90 bp TTTCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTAACTCCCTTATTTTCTaGCATGTACTTCTTGGCAAT +
Preference number: 4 (lower is better)
Translates to: FPLSTWFSALEAVPVHSSNSLIF*HVLLGN
Trigger: ATTGCCAAGAAGTACATGTCAGAAAATAAGGGAGTT...AGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR TCA 90 bp TCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATAACTCCCTTATTTTCTaGCATGTACTTCTTGGCAAT +
Preference number: 4 (lower is better)
Translates to: SPFNLVFGSGSCSCAQFYNSLIF*HVLLGN
Trigger: ATTGCCAAGAAGTACATGTCAGAAAATAAGGGAGTT...ATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR TCA 90 bp CCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTTCATTTGCTTTGGGGTTTaGACATTCACTACGAAAGTG +
Preference number: 4 (lower is better)
Translates to: PFNLVFGSGSCSCAQFYFICFGV*TFTTKV
Trigger: CACTTTCGTAGTGAATGTTCAAACCCCAAAGCAAAT...GAAATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR GCA 90 bp AGTTACCATTTTGAATTATTATATAATCAGACTCTAGCCTGGCATCACGGAGACTCCGTCTCCCTGACATaGTTCTGGAAGAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SYHFELLYNQTLAWHHGDSVSLT*FWKRLL
Trigger: CAGCAGCCTCTTCCAGAAGCATGTCAGGGAGACGGA...GTCTCCGTGATGCCAGGCTAGAGTCTGATTATATAATAATTCAAAATGGTAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp ACTCTAACTCATAACCCTCTGAAGACACTTGGTAAAGGCAACACAGCTGACGAGAGTTTTGCTGTAGTGTaGATGGCAAGGACAGTCTTT +
Preference number: 4 (lower is better)
Translates to: TLTHNPLKTLGKGNTADESFAVV*MARTVF
Trigger: AAAGACTGTCCTTGCCATCCACACTACAGCAAAACT...CTCGTCAGCTGTGTTGCCTTTACCAAGTGTCTTCAGAGGGTTATGAGTTAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359359.6
CDS-3UTR CCA 90 bp TTCCACTTTGCTTGGGAAACTACAAGAACTTCTTTAATCAGCCATGGCCTTCCACCATGGATAAGGAAATaGGAACCACCGCTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: FHFAWETTRTSLISHGLPPWIRK*EPPLRK
Trigger: TTTCCTGAGCGGTGGTTCCCATTTCCTTATCCATGG...TGGAAGGCCATGGCTGATTAAAGAAGTTCTTGTAGTTTCCCAAGCAAAGTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR CCA 90 bp TTCCACTTTGCTTGGGAAACTACAAGAACTTCTTTAATCAGCCATGGCCTTCCATTTCCCCTTTCAACCTaGTTTTCGGCTCTGGAAGCT +
Preference number: 4 (lower is better)
Translates to: FHFAWETTRTSLISHGLPFPLST*FSALEA
Trigger: AGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGAAA...TGGAAGGCCATGGCTGATTAAAGAAGTTCTTGTAGTTTCCCAAGCAAAGTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR CCA 90 bp ACTCTAACTCATAACCCTCTGAAGACACTTGGTAAAGGCAACACAGCTGACGAGAAGAGCCACGGACAATaGGAAAGAAGTGTACTTCTT +
Preference number: 4 (lower is better)
Translates to: TLTHNPLKTLGKGNTADEKSHGQ*ERSVLL
Trigger: AAGAAGTACACTTCTTTCCCATTGTCCGTGGCTCTT...CTCGTCAGCTGTGTTGCCTTTACCAAGTGTCTTCAGAGGGTTATGAGTTAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR CCA 90 bp TTCCACTTTGCTTGGGAAACTACAAGAACTTCTTTAATCAGCCATGGCCTTCCAGGACAACAGACAAGCTaGCTGAGGGTTTCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: FHFAWETTRTSLISHGLPGQQTS*LRVSLQ
Trigger: TTGAAGAGAAACCCTCAGCCAGCTTGTCTGTTGTCC...TGGAAGGCCATGGCTGATTAAAGAAGTTCTTGTAGTTTCCCAAGCAAAGTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp TTCCACTTTGCTTGGGAAACTACAAGAACTTCTTTAATCAGCCATGGCCTTCCACCTGTCTGGATAAGATaGGGCTTTCTGGGAATGTCA +
Preference number: 4 (lower is better)
Translates to: FHFAWETTRTSLISHGLPPVWIR*GFLGMS
Trigger: TGACATTCCCAGAAAGCCCCATCTTATCCAGACAGG...TGGAAGGCCATGGCTGATTAAAGAAGTTCTTGTAGTTTCCCAAGCAAAGTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR TCA 90 bp CCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTTAACTCCCTTATTTTCTaGCATGTACTTCTTGGCAAT +
Preference number: 4 (lower is better)
Translates to: PFQPGFRLWKLFLCTVLFNSLIF*HVLLGN
Trigger: ATTGCCAAGAAGTACATGTCAGAAAATAAGGGAGTT...AAATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR TCA 90 bp TTCCACTTTGCTTGGGAAACTACAAGAACTTCTTTAATCAGCCATGGCCTTCCATATTTCCTACAGTTCTaGGAAAGCGGTTCCATCGCA +
Preference number: 4 (lower is better)
Translates to: FHFAWETTRTSLISHGLPYFLQF*ESGSIA
Trigger: TGCGATGGAACCGCTTTCTCAGAACTGTAGGAAATA...TGGAAGGCCATGGCTGATTAAAGAAGTTCTTGTAGTTTCCCAAGCAAAGTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR GCA 90 bp ACTCTAACTCATAACCCTCTGAAGACACTTGGTAAAGGCAACACAGCTGACGAGCATAATACTCCTGTCTaGCCTGACCTTTTTGTTTAC +
Preference number: 4 (lower is better)
Translates to: TLTHNPLKTLGKGNTADEHNTPV*PDLFVY
Trigger: GTAAACAAAAAGGTCAGGGCAGACAGGAGTATTATG...CTCGTCAGCTGTGTTGCCTTTACCAAGTGTCTTCAGAGGGTTATGAGTTAGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359359.6
CDS-3UTR GCA 90 bp CTTTGGGGTTTGAACATTCACTACGAAAGTGACTGGGTAATAAGCAAACTCATTAACAGGCCATTCAAGTaGTCAATGGTCCCCACTGCT +
Preference number: 4 (lower is better)
Translates to: LWGLNIHYESDWVISKLINRPFK*SMVPTA
Trigger: AGCAGTGGGGACCATTGAGCACTTGAATGGCCTGTT...AATGAGTTTGCTTATTACCCAGTCACTTTCGTAGTGAATGTTCAAACCCCAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR CAA 72 bp CCAGCGGTTAACTGCTCTAAGCCTCCACTTATTTACTaGCAAAATGGGGATCTAACACCTACTTTACAGGAT +
Preference number: 4 (lower is better)
Translates to: PAVNCSKPPLIY*QNGDLTPTLQD
Trigger: ATCCTGTAAAGTAGGTGTTAGATCCCCATTTTGCAAGTAAATAAGTGGAGGCTTAGAGCAGTTAACCGCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480824.7
3UTR CAA 72 bp TGTGGAACTTGTATACTCAAGAGAGCTTTTCCTTCATaGTCAGGAGAGCTCAAAATCCTAAGAGGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: CGTCILKRAFPS*SGELKILRGPS
Trigger: AGAAGGGCCTCTTAGGATTTTGAGCTCTCCTGACAATGAAGGAAAAGCTCTCTTGAGTATACAAGTTCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp TTCCACTTTGCTTGGGAAACTACAAGAACTTCTTTAATCAGCCATGGCCTTCCATTGATCACCAGTGGATaGAGCCTCTCAAATTTCCTT +
Preference number: 4 (lower is better)
Translates to: FHFAWETTRTSLISHGLPLITSG*SLSNFL
Trigger: AAGGAAATTTGAGAGGCTCCATCCACTGGTGATCAA...TGGAAGGCCATGGCTGATTAAAGAAGTTCTTGTAGTTTCCCAAGCAAAGTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR CCA 90 bp TTCCACTTTGCTTGGGAAACTACAAGAACTTCTTTAATCAGCCATGGCCTTCCAAGGGCAAGAGTGAAATaGGGAAAGGAATACAGAGTA +
Preference number: 4 (lower is better)
Translates to: FHFAWETTRTSLISHGLPRARVK*GKEYRV
Trigger: TACTCTGTATTCCTTTCCCCATTTCACTCTTGCCCT...TGGAAGGCCATGGCTGATTAAAGAAGTTCTTGTAGTTTCCCAAGCAAAGTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp AGTTACCATTTTGAATTATTATATAATCAGACTCTAGCCTGGCATCACGGAGACGGTGTCAATGAAGCCTaGCACAGAGAAGATGTCCCA +
Preference number: 4 (lower is better)
Translates to: SYHFELLYNQTLAWHHGDGVNEA*HREDVP
Trigger: TGGGACATCTTCTCTGTGCCAGGCTTCATTGACACC...GTCTCCGTGATGCCAGGCTAGAGTCTGATTATATAATAATTCAAAATGGTAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp CTTTGGGGTTTGAACATTCACTACGAAAGTGACTGGGTAATAAGCAAACTCATTCTGTGGAAAGAAGTATaGAGGGAAGCCTGTCTGGAT +
Preference number: 4 (lower is better)
Translates to: LWGLNIHYESDWVISKLILWKEV*REACLD
Trigger: ATCCAGACAGGCTTCCCTCCATACTTCTTTCCACAG...AATGAGTTTGCTTATTACCCAGTCACTTTCGTAGTGAATGTTCAAACCCCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR GCA 90 bp CATTTGCTTTGGGGTTTGAACATTCACTACGAAAGTGACTGGGTAATAAGCAAACATTCACTACTTGACTaGTGGAGAGCTCAGGACATT +
Preference number: 4 (lower is better)
Translates to: HLLWGLNIHYESDWVISKHSLLD*WRAQDI
Trigger: AATGTCCTGAGCTCTCCAGCAGTCAAGTAGTGAATG...TTTGCTTATTACCCAGTCACTTTCGTAGTGAATGTTCAAACCCCAAAGCAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp AGTTACCATTTTGAATTATTATATAATCAGACTCTAGCCTGGCATCACGGAGACCAGAGGTCTCCTCCATaGATAAGGAAATGGGAACCA +
Preference number: 4 (lower is better)
Translates to: SYHFELLYNQTLAWHHGDQRSPP*IRKWEP
Trigger: TGGTTCCCATTTCCTTATCCATGGAGGAGACCTCTG...GTCTCCGTGATGCCAGGCTAGAGTCTGATTATATAATAATTCAAAATGGTAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR GCA 90 bp CATTTGCTTTGGGGTTTGAACATTCACTACGAAAGTGACTGGGTAATAAGCAAATGGAAGCTGTTCCTGTaGACAGTTCTATTTCCTACA +
Preference number: 4 (lower is better)
Translates to: HLLWGLNIHYESDWVISKWKLFL*TVLFPT
Trigger: TGTAGGAAATAGAACTGTGCACAGGAACAGCTTCCA...TTTGCTTATTACCCAGTCACTTTCGTAGTGAATGTTCAAACCCCAAAGCAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp TTTTTCATCAACCATAATAAGTATGGTATCCATTCACTACTTGACTGCTGGAGACAGAATGCTTCAAACTaGGGCCAAAGTAGCCTGTCT +
Preference number: 4 (lower is better)
Translates to: FFINHNKYGIHSLLDCWRQNASN*GQSSLS
Trigger: AGACAGGCTACTTTGGCCCCAGTTTGAAGCATTCTG...TCTCCAGCAGTCAAGTAGTGAATGGATACCATACTTATTATGGTTGATGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR TCA 90 bp AGTTACCATTTTGAATTATTATATAATCAGACTCTAGCCTGGCATCACGGAGACAAAGTAAGTGTACACTaGGTCCTATGCTGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: SYHFELLYNQTLAWHHGDKVSVH*VLCWVL
Trigger: CAAAACCCAGCATAGGACTCAGTGTACACTTACTTT...GTCTCCGTGATGCCAGGCTAGAGTCTGATTATATAATAATTCAAAATGGTAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR GCA 90 bp TTTTTCATCAACCATAATAAGTATGGTATCCATTCACTACTTGACTGCTGGAGATCTTCATCACCCCCATaGAGAGGAACTCCCTTATTT +
Preference number: 4 (lower is better)
Translates to: FFINHNKYGIHSLLDCWRSSSPP*RGTPLF
Trigger: AAATAAGGGAGTTCCTCTGCATGGGGGTGATGAAGA...TCTCCAGCAGTCAAGTAGTGAATGGATACCATACTTATTATGGTTGATGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR TCA 90 bp CTTTGGGGTTTGAACATTCACTACGAAAGTGACTGGGTAATAAGCAAACTCATTCCTTCTGTTTATAACTaGTTCTCGAAAGGTAGACAA +
Preference number: 4 (lower is better)
Translates to: LWGLNIHYESDWVISKLIPSVYN*FSKGRQ
Trigger: TTGTCTACCTTTCGAGAATCAGTTATAAACAGAAGG...AATGAGTTTGCTTATTACCCAGTCACTTTCGTAGTGAATGTTCAAACCCCAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR GCA 90 bp TTTTTCATCAACCATAATAAGTATGGTATCCATTCACTACTTGACTGCTGGAGATCTGTACACAACATCTaGAGGTCCAAATACAGAGAG +
Preference number: 4 (lower is better)
Translates to: FFINHNKYGIHSLLDCWRSVHNI*RSKYRE
Trigger: CTCTCTGTATTTGGACCTGCAGATGTTGTGTACAGA...TCTCCAGCAGTCAAGTAGTGAATGGATACCATACTTATTATGGTTGATGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CCA 90 bp TTTTTCATCAACCATAATAAGTATGGTATCCATTCACTACTTGACTGCTGGAGATTGATCACCAGTGGATaGAGCCTCTCAAATTTCCTT +
Preference number: 4 (lower is better)
Translates to: FFINHNKYGIHSLLDCWRLITSG*SLSNFL
Trigger: AAGGAAATTTGAGAGGCTCCATCCACTGGTGATCAA...TCTCCAGCAGTCAAGTAGTGAATGGATACCATACTTATTATGGTTGATGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CAA 90 bp AGTGCTGCCTCAGCAGTAGTGGGCTCTGGCCCCGCCAAGGCAGGGAGGACTAGGTGCGGAGTTCCTGGCTaGCTGACCCCCATCCCTGGG +
Preference number: 5 (lower is better)
Translates to: SAASAVVGSGPAKAGRTRCGVPG*LTPIPG
Trigger: CCCAGGGATGGGGGTCAGCAAGCCAGGAACTCCGCA...CCTAGTCCTCCCTGCCTTGGCGGGGCCAGAGCCCACTACTGCTGAGGCAGCACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CAA 90 bp CCGGAAGGAGAGCTGCAGCTGACCCTGGCACCTGTCCCCGATGATGGCGGGAGCTCTGACATGTACTTCTaGGCAATGGGCAAGGACATC +
Preference number: 5 (lower is better)
Translates to: PEGELQLTLAPVPDDGGSSDMYF*AMGKDI
Trigger: GATGTCCTTGCCCATTGCCAAGAAGTACATGTCAGA...GCTCCCGCCATCATCGGGGACAGGTGCCAGGGTCAGCTGCAGCTCTCCTTCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CAA 90 bp AGAAAGTCAGACCCTAAAGATCAAACCCAGGGAGGCACCCTCTCCCCAGGCCAGGCACAGCCAGTGCAGTaGGCAGGAATGGGCTCTGAC +
Preference number: 5 (lower is better)
Translates to: RKSDPKDQTQGGTLSPGQAQPVQ*AGMGSD
Trigger: GTCAGAGCCCATTCCTGCCAACTGCACTGGCTGTGC...CTGGCCTGGGGAGAGGGTGCCTCCCTGGGTTTGATCTTTAGGGTCTGACTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR CAA 90 bp TCAAACCCAGGGAGGCACCCTCTCCCCAGGCCAGCTACTCTAACTCATAACCCTGCACAGCCAGTGCAGTaGGCAGGAATGGGCTCTGAC +
Preference number: 5 (lower is better)
Translates to: SNPGRHPLPRPATLTHNPAQPVQ*AGMGSD
Trigger: GTCAGAGCCCATTCCTGCCAACTGCACTGGCTGTGC...AGGGTTATGAGTTAGAGTAGCTGGCCTGGGGAGAGGGTGCCTCCCTGGGTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR CAA 90 bp AGGACTAGGGCCGAGCTTCTGAGAAGCCATCCAGATAGGCAAGGGAGAAGGGGAGCTCTGGCCACTGCCTaGCAGCTCACAGCTGGTTCA +
Preference number: 5 (lower is better)
Translates to: RTRAELLRSHPDRQGRRGALATA*QLTAGS
Trigger: TGAACCAGCTGTGAGCTGCAAGGCAGTGGCCAGAGC...TCCCCTTCTCCCTTGCCTATCTGGATGGCTTCTCAGAAGCTCGGCCCTAGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR CAA 90 bp TTGCTGACCCCCATCCCTGGGTTCTCCCACCCCAACGGAGGCACATCTGAGTCACAGCTGACAAACACTTaGGGTCTGGATTTCCTCCCC +
Preference number: 5 (lower is better)
Translates to: LLTPIPGFSHPNGGTSESQLTNT*GLDFLP
Trigger: GGGGAGGAAATCCAGACCCAAAGTGTTTGTCAGCTG...TGACTCAGATGTGCCTCCGTTGGGGTGGGAGAACCCAGGGATGGGGGTCAGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CAA 90 bp ACTAGGGCCGAGCTTCTGAGAAGCCATCCAGATAGGCAAGGGAGAAGGGGAGGGGAAACCACGTGTCCCTaGATCACAACTGAGCGGCTG +
Preference number: 5 (lower is better)
Translates to: TRAELLRSHPDRQGRRGGETTCP*ITTERL
Trigger: CAGCCGCTCAGTTGTGATCAAGGGACACGTGGTTTC...CCCTCCCCTTCTCCCTTGCCTATCTGGATGGCTTCTCAGAAGCTCGGCCCTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CAA 90 bp GTGGGCTCTGGCCCCGCCAAGGCAGGGAGGACTAGGGCCGAGCTTCTGAGAAGCGCCACCATGCCCAGCTaGAACCACTTTTATTTTATT +
Preference number: 5 (lower is better)
Translates to: VGSGPAKAGRTRAELLRSATMPS*NHFYFI
Trigger: AATAAAATAAAAGTGGTTCAAGCTGGGCATGGTGGC...GCTTCTCAGAAGCTCGGCCCTAGTCCTCCCTGCCTTGGCGGGGCCAGAGCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CAA 90 bp TGCCTGAAGGGCAGCATCAAGGTCATAGTGTCCAAAGGCCCGGAAGAGGTCAGTCCACGGTGGGTGGACTaGGATGTGGTGCACGAGAAG +
Preference number: 5 (lower is better)
Translates to: CLKGSIKVIVSKGPEEVSPRWVD*DVVHEK
Trigger: CTTCTCGTGCACCACATCCAAGTCCACCCACCGTGG...ACTGACCTCTTCCGGGCCTTTGGACACTATGACCTTGATGCTGCCCTTCAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CAA 90 bp GCCATGCAGGTGAAGAAAGGCACCAGCCCTGTTTCCTGCCTGAAGGGCAGCATCTCTGCTCACAGTCGTTaGTCCACCAGGGGTCAAAGT +
Preference number: 5 (lower is better)
Translates to: AMQVKKGTSPVSCLKGSISAHSR*STRGQS
Trigger: ACTTTGACCCCTGGTGGACAAACGACTGTGAGCAGA...GATGCTGCCCTTCAGGCAGGAAACAGGGCTGGTGCCTTTCTTCACCTGCATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR CAA 90 bp AGAAAGTCAGACCCTAAAGATCAAACCCAGGGAGGCACCCTCTCCCCAGGCCAGGCCTCTCAAATTTCCTaGGGGCGTCTTCCAGGAGCA +
Preference number: 5 (lower is better)
Translates to: RKSDPKDQTQGGTLSPGQASQIS*GRLPGA
Trigger: TGCTCCTGGAAGACGCCCCAAGGAAATTTGAGAGGC...CTGGCCTGGGGAGAGGGTGCCTCCCTGGGTTTGATCTTTAGGGTCTGACTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR CAA 90 bp AGAAAGTCAGACCCTAAAGATCAAACCCAGGGAGGCACCCTCTCCCCAGGCCAGAAGCAGCGCCACCACTaGGCGAAAAACCCTTCAGAG +
Preference number: 5 (lower is better)
Translates to: RKSDPKDQTQGGTLSPGQKQRHH*AKNPSE
Trigger: CTCTGAAGGGTTTTTCGCCAAGTGGTGGCGCTGCTT...CTGGCCTGGGGAGAGGGTGCCTCCCTGGGTTTGATCTTTAGGGTCTGACTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR CAA 90 bp AGGACTAGGGCCGAGCTTCTGAGAAGCCATCCAGATAGGCAAGGGAGAAGGGGAAAGCAGCGCCACCACTaGGCGAAAAACCCTTCAGAG +
Preference number: 5 (lower is better)
Translates to: RTRAELLRSHPDRQGRRGKQRHH*AKNPSE
Trigger: CTCTGAAGGGTTTTTCGCCAAGTGGTGGCGCTGCTT...TCCCCTTCTCCCTTGCCTATCTGGATGGCTTCTCAGAAGCTCGGCCCTAGTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR CAA 90 bp AAGAAAGGCACCAGCCCTGTTTCCTGCCTGAAGGGCAGCATCAAGGTCATAGTGGCTCTGGCCACTGCCTaGCAGCTCACAGCTGGTTCA +
Preference number: 5 (lower is better)
Translates to: KKGTSPVSCLKGSIKVIVALATA*QLTAGS
Trigger: TGAACCAGCTGTGAGCTGCAAGGCAGTGGCCAGAGC...CACTATGACCTTGATGCTGCCCTTCAGGCAGGAAACAGGGCTGGTGCCTTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR CAA 90 bp AGTCAGACCCTAAAGATCAAACCCAGGGAGGCACCCTCTCCCCAGGCCAGCTACCAGCTGACAAACACTTaGGGTCTGGATTTCCTCCCC +
Preference number: 5 (lower is better)
Translates to: SQTLKIKPREAPSPQASYQLTNT*GLDFLP
Trigger: GGGGAGGAAATCCAGACCCAAAGTGTTTGTCAGCTG...GTAGCTGGCCTGGGGAGAGGGTGCCTCCCTGGGTTTGATCTTTAGGGTCTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR CAA 90 bp CTTTGCAAGCCCATAGACAAACAGGCCATTCAAGTGCTCAATGGTCCCCACTGCCCCCGACCCTCGGCATaGGTTACTGACCCTTCCCCA +
Preference number: 5 (lower is better)
Translates to: LCKPIDKQAIQVLNGPHCPRPSA*VTDPSP
Trigger: TGGGGAAGGGTCAGTAACCAATGCCGAGGGTCGGGG...GCAGTGGGGACCATTGAGCACTTGAATGGCCTGTTTGTCTATGGGCTTGCAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS GCA 90 bp TGGGCACAGCCAGTGCAGTTGGCAGGAATGGGCTCTGACTCATTCTaGTCACAGTCGTTTGTCCACCAGGGGTCAAAGTCTGGAAAGGGT +
Preference number: 5 (lower is better)
Translates to: WAQPVQLAGMGSDSF*SQSFVHQGSKSGKG
Trigger: ACCCTTTCCAGACTTTGACCCCTGGTGGACAAACGACTGTGAGCAGAATGAGTCAGAGCCCATTCCTGCCAACTGCACTGGCTGTGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CAA 90 bp GGGAGGCACCCTCTCCCCAGGCCAGCTACTCTAACTCATAACCCTCTGAAGACAGATCCTGCAGGTACCTaGCATGTTCACTCAGTGCTC +
Preference number: 5 (lower is better)
Translates to: GRHPLPRPATLTHNPLKTDPAGT*HVHSVL
Trigger: GAGCACTGAGTGAACATGCAAGGTACCTGCAGGATC...TGTCTTCAGAGGGTTATGAGTTAGAGTAGCTGGCCTGGGGAGAGGGTGCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359359.6
CDS CCA 90 bp AATTTCCTTGGGGCGTCTTCCAGGAGCATCACCTTCAGGTGTTTCTaGGCACAGCCAGTGCAGTTGGCAGGAATGGGCTCTGACTCATTC +
Preference number: 5 (lower is better)
Translates to: NFLGASSRSITFRCF*AQPVQLAGMGSDSF
Trigger: GAATGAGTCAGAGCCCATTCCTGCCAACTGCACTGGCTGTGCCCAGAAACACCTGAAGGTGATGCTCCTGGAAGACGCCCCAAGGAAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS CCA 90 bp GATAAGGAAATGGGAACCACCGCTCAGGAAAGCAGCGCCACCACTTaGCGAAAAACCCTTCAGAGAAGCCTTCTGTCGCCTCAGGGTACT +
Preference number: 5 (lower is better)
Translates to: DKEMGTTAQESSATT*RKTLQRSLLSPQGT
Trigger: AGTACCCTGAGGCGACAGAAGGCTTCTCTGAAGGGTTTTTCGCCAAGTGGTGGCGCTGCTTTCCTGAGCGGTGGTTCCCATTTCCTTATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CAA 90 bp AGTCAGACCCTAAAGATCAAACCCAGGGAGGCACCCTCTCCCCAGGCCAGCTACTCTGACATGTACTTCTaGGCAATGGGCAAGGACATC +
Preference number: 5 (lower is better)
Translates to: SQTLKIKPREAPSPQASYSDMYF*AMGKDI
Trigger: GATGTCCTTGCCCATTGCCAAGAAGTACATGTCAGA...GTAGCTGGCCTGGGGAGAGGGTGCCTCCCTGGGTTTGATCTTTAGGGTCTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR CAA 90 bp GGCTGGGTTCCTTTCTCCACACAGTGCTTGCCGCCATGGCTCATTCTTGGATTGTCTGCTCACAGTCGTTaGTCCACCAGGGGTCAAAGT +
Preference number: 5 (lower is better)
Translates to: GWVPFSTQCLPPWLILGLSAHSR*STRGQS
Trigger: ACTTTGACCCCTGGTGGACAAACGACTGTGAGCAGA...CAATCCAAGAATGAGCCATGGCGGCAAGCACTGTGTGGAGAAAGGAACCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CAA 90 bp CCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTGCACAGCCAGTGCAGTaGGCAGGAATGGGCTCTGAC +
Preference number: 5 (lower is better)
Translates to: PLSTWFSALEAVPVHSSIAQPVQ*AGMGSD
Trigger: GTCAGAGCCCATTCCTGCCAACTGCACTGGCTGTGC...AATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CAA 90 bp ACTCTAGCCTGGCATCACGGAGACTCCAAGAGCCACGGACAATGGGAAAGAAGTGCCTCTCAAATTTCCTaGGGGCGTCTTCCAGGAGCA +
Preference number: 5 (lower is better)
Translates to: TLAWHHGDSKSHGQWERSASQIS*GRLPGA
Trigger: TGCTCCTGGAAGACGCCCCAAGGAAATTTGAGAGGC...ACTTCTTTCCCATTGTCCGTGGCTCTTGGAGTCTCCGTGATGCCAGGCTAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR CAA 90 bp AGTGCTGCCTCAGCAGTAGTGGGCTCTGGCCCCGCCAAGGCAGGGAGGACTAGGATCAAAATAGTTGCTTaGTTCCTAAGAAACCCTCTC +
Preference number: 5 (lower is better)
Translates to: SAASAVVGSGPAKAGRTRIKIVA*FLRNPL
Trigger: GAGAGGGTTTCTTAGGAACAAAGCAACTATTTTGAT...CCTAGTCCTCCCTGCCTTGGCGGGGCCAGAGCCCACTACTGCTGAGGCAGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CAA 90 bp AGGACTAGGGCCGAGCTTCTGAGAAGCCATCCAGATAGGCAAGGGAGAAGGGGAGTATCCATTCACTACTaGACTGCTGGAGAGCTCAGG +
Preference number: 5 (lower is better)
Translates to: RTRAELLRSHPDRQGRRGVSIHY*TAGELR
Trigger: CCTGAGCTCTCCAGCAGTCAAGTAGTGAATGGATAC...TCCCCTTCTCCCTTGCCTATCTGGATGGCTTCTCAGAAGCTCGGCCCTAGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS CCA 90 bp CTTTCCCGTCTTGATCACCAGTGGATGGAGCCTCTCAAATTTCCTTaGGGCGTCTTCCAGGAGCATCACCTTCAGGTGTTTCTGGGCACA +
Preference number: 5 (lower is better)
Translates to: LSRLDHQWMEPLKFP*GVFQEHHLQVFLGT
Trigger: TGTGCCCAGAAACACCTGAAGGTGATGCTCCTGGAAGACGCCCCAAGGAAATTTGAGAGGCTCCATCCACTGGTGATCAAGACGGGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CAA 90 bp GGGAGGCACCCTCTCCCCAGGCCAGCTACTCTAACTCATAACCCTCTGAAGACATCTGCCCTGACCTTTTaGTTTACTGGAGCTGTTGTC +
Preference number: 5 (lower is better)
Translates to: GRHPLPRPATLTHNPLKTSALTF*FTGAVV
Trigger: GACAACAGCTCCAGTAAACAAAAAGGTCAGGGCAGA...TGTCTTCAGAGGGTTATGAGTTAGAGTAGCTGGCCTGGGGAGAGGGTGCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359359.6
CDS-3UTR CAA 90 bp CCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTTCGCACAGCCAGTGCAGTaGGCAGGAATGGGCTCTGAC +
Preference number: 5 (lower is better)
Translates to: PFNLVFGSGSCSCAQFYFAQPVQ*AGMGSD
Trigger: GTCAGAGCCCATTCCTGCCAACTGCACTGGCTGTGC...GAAATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CAA 90 bp TTTCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTAGGGGCTTTCCCGTCTaGATCACCAGTGGATGGAGC +
Preference number: 5 (lower is better)
Translates to: FPLSTWFSALEAVPVHSSRGFPV*ITSGWS
Trigger: GCTCCATCCACTGGTGATCAAGACGGGAAAGCCCCT...AGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS TCA 90 bp GGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTTCCTACAGTTCTaGGAAAGCGGTTCCATCGCAGATGACCAAAGGCTGGACCCCTCT +
Preference number: 5 (lower is better)
Translates to: GSGSCSCAQFYFLQF*ESGSIADDQRLDPS
Trigger: AGAGGGGTCCAGCCTTTGGTCATCTGCGATGGAACCGCTTTCTCAGAACTGTAGGAAATAGAACTGTGCACAGGAACAGCTTCCAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CAA 90 bp TTTCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTGCCTCTCAAATTTCCTaGGGGCGTCTTCCAGGAGCA +
Preference number: 5 (lower is better)
Translates to: FPLSTWFSALEAVPVHSSASQIS*GRLPGA
Trigger: TGCTCCTGGAAGACGCCCCAAGGAAATTTGAGAGGC...AGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CAA 90 bp CCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTGCCTCTCAAATTTCCTaGGGGCGTCTTCCAGGAGCA +
Preference number: 5 (lower is better)
Translates to: PLSTWFSALEAVPVHSSIASQIS*GRLPGA
Trigger: TGCTCCTGGAAGACGCCCCAAGGAAATTTGAGAGGC...AATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CAA 90 bp CCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTTCAGGGGCTTTCCCGTCTaGATCACCAGTGGATGGAGC +
Preference number: 5 (lower is better)
Translates to: PFNLVFGSGSCSCAQFYFRGFPV*ITSGWS
Trigger: GCTCCATCCACTGGTGATCAAGACGGGAAAGCCCCT...GAAATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CAA 90 bp CCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTTAGGGGCTTTCCCGTCTaGATCACCAGTGGATGGAGC +
Preference number: 5 (lower is better)
Translates to: PFQPGFRLWKLFLCTVLFRGFPV*ITSGWS
Trigger: GCTCCATCCACTGGTGATCAAGACGGGAAAGCCCCT...AAATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CAA 90 bp GGGAGGCACCCTCTCCCCAGGCCAGCTACTCTAACTCATAACCCTCTGAAGACAGAAAAACACCTCACCTaGTCTTTGTTTCGCAGCACA +
Preference number: 5 (lower is better)
Translates to: GRHPLPRPATLTHNPLKTEKHLT*SLFRST
Trigger: TGTGCTGCGAAACAAAGACAAGGTGAGGTGTTTTTC...TGTCTTCAGAGGGTTATGAGTTAGAGTAGCTGGCCTGGGGAGAGGGTGCCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR CAA 90 bp CCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTCTCCTGGGCGAGGCCTaGTACCCTAGAGTAATTCCT +
Preference number: 5 (lower is better)
Translates to: PLSTWFSALEAVPVHSSILLGEA*YPRVIP
Trigger: AGGAATTACTCTAGGGTACAAGGCCTCGCCCAGGAG...AATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355190.7
ENST00000373685.1
CDS-3UTR CAA 90 bp TTTCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTCTCCTGGGCGAGGCCTaGTACCCTAGAGTAATTCCT +
Preference number: 5 (lower is better)
Translates to: FPLSTWFSALEAVPVHSSLLGEA*YPRVIP
Trigger: AGGAATTACTCTAGGGTACAAGGCCTCGCCCAGGAG...AGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355190.7
ENST00000373685.1
CDS-3UTR CAA 90 bp CCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTCTGCTGTGCAGGGCCTaGATCATCAGAAAGGGACTG +
Preference number: 5 (lower is better)
Translates to: PLSTWFSALEAVPVHSSILLCRA*IIRKGL
Trigger: CAGTCCCTTTCTGATGATCAAGGCCCTGCACAGCAG...AATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CAA 90 bp TGCCTGAAGGGCAGCATCAAGGTCATAGTGTCCAAAGGCCCGGAAGAGGTCAGTCATACAGAGGGACTTTaGATGCTTCCAGCTAGATGG +
Preference number: 5 (lower is better)
Translates to: CLKGSIKVIVSKGPEEVSHTEGL*MLPARW
Trigger: CCATCTAGCTGGAAGCATCAAAAGTCCCTCTGTATG...ACTGACCTCTTCCGGGCCTTTGGACACTATGACCTTGATGCTGCCCTTCAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CAA 90 bp GGGAGGCACCCTCTCCCCAGGCCAGCTACTCTAACTCATAACCCTCTGAAGACAAATGGCTGGACACAGTaGTGTTTCAGCTACATTCAC +
Preference number: 5 (lower is better)
Translates to: GRHPLPRPATLTHNPLKTNGWTQ*CFSYIH
Trigger: GTGAATGTAGCTGAAACACAACTGTGTCCAGCCATT...TGTCTTCAGAGGGTTATGAGTTAGAGTAGCTGGCCTGGGGAGAGGGTGCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CAA 90 bp TTTCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTTCTGCTCACAGTCGTTaGTCCACCAGGGGTCAAAGT +
Preference number: 5 (lower is better)
Translates to: FPLSTWFSALEAVPVHSSSAHSR*STRGQS
Trigger: ACTTTGACCCCTGGTGGACAAACGACTGTGAGCAGA...AGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CAA 90 bp TCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTCTGCTCACAGTCGTTaGTCCACCAGGGGTCAAAGT +
Preference number: 5 (lower is better)
Translates to: SPFNLVFGSGSCSCAQFYSAHSR*STRGQS
Trigger: ACTTTGACCCCTGGTGGACAAACGACTGTGAGCAGA...ATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CAA 90 bp CCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTTCAAGCAGCGCCACCACTaGGCGAAAAACCCTTCAGAG +
Preference number: 5 (lower is better)
Translates to: PFNLVFGSGSCSCAQFYFKQRHH*AKNPSE
Trigger: CTCTGAAGGGTTTTTCGCCAAGTGGTGGCGCTGCTT...GAAATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CAA 90 bp AAATTATGCAGGGCAGGGAAACCAGAGACACTGAGGGACCTGGACAACAGACAATTCTCCACACAGTGCTaGCCGCCATGGCTCATTCTT +
Preference number: 5 (lower is better)
Translates to: KLCRAGKPETLRDLDNRQFSTQC*PPWLIL
Trigger: AAGAATGAGCCATGGCGGCAAGCACTGTGTGGAGAA...TTGTCTGTTGTCCAGGTCCCTCAGTGTCTCTGGTTTCCCTGCCCTGCATAATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CAA 90 bp CAAGACAGGGACAAGCAGGCCCACCTGGTAAAGGATGGCTCTGACATTAGAACCCCTGACACCATAAGCTaGAAAATCAAGAGTCCTGGA +
Preference number: 5 (lower is better)
Translates to: QDRDKQAHLVKDGSDIRTPDTIS*KIKSPG
Trigger: TCCAGGACTCTTGATTTTCAAGCTTATGGTGTCAGG...GGTTCTAATGTCAGAGCCATCCTTTACCAGGTGGGCCTGCTTGTCCCTGTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359359.6
CDS-3UTR CAA 90 bp AGTCAGACCCTAAAGATCAAACCCAGGGAGGCACCCTCTCCCCAGGCCAGCTACGAAGAAAGCATTACCTaGGGAGTTACCATTTTGAAT +
Preference number: 5 (lower is better)
Translates to: SQTLKIKPREAPSPQASYEESIT*GVTILN
Trigger: ATTCAAAATGGTAACTCCCAAGGTAATGCTTTCTTC...GTAGCTGGCCTGGGGAGAGGGTGCCTCCCTGGGTTTGATCTTTAGGGTCTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR CAA 90 bp ACTCTAGCCTGGCATCACGGAGACTCCAAGAGCCACGGACAATGGGAAAGAAGTGAAAAACACCTCACCTaGTCTTTGTTTCGCAGCACA +
Preference number: 5 (lower is better)
Translates to: TLAWHHGDSKSHGQWERSEKHLT*SLFRST
Trigger: TGTGCTGCGAAACAAAGACAAGGTGAGGTGTTTTTC...ACTTCTTTCCCATTGTCCGTGGCTCTTGGAGTCTCCGTGATGCCAGGCTAGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR CAA 90 bp AAGAAAGGCACCAGCCCTGTTTCCTGCCTGAAGGGCAGCATCAAGGTCATAGTGGTCCTATGCTGGGTTTaGGTAGAAGGGAACAGAAAA +
Preference number: 5 (lower is better)
Translates to: KKGTSPVSCLKGSIKVIVVLCWV*VEGNRK
Trigger: TTTTCTGTTCCCTTCTACCAAAACCCAGCATAGGAC...CACTATGACCTTGATGCTGCCCTTCAGGCAGGAAACAGGGCTGGTGCCTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS TCA 90 bp GGGTCTGTCTTCATCACCCCCATGCAGAGGAACTCCCTTATTTTCTaGCATGTACTTCTTGGCAATGGGCAAGGACATCAGCCTAATGTG +
Preference number: 5 (lower is better)
Translates to: GSVFITPMQRNSLIF*HVLLGNGQGHQPNV
Trigger: CACATTAGGCTGATGTCCTTGCCCATTGCCAAGAAGTACATGTCAGAAAATAAGGGAGTTCCTCTGCATGGGGGTGATGAAGACAGACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CAA 90 bp CTTTGCAAGCCCATAGACAAACAGGCCATTCAAGTGCTCAATGGTCCCCACTGCGAGAGCTCAGGACATTaGGACAGAATGCTTCAAACT +
Preference number: 5 (lower is better)
Translates to: LCKPIDKQAIQVLNGPHCESSGH*DRMLQT
Trigger: AGTTTGAAGCATTCTGTCCAAATGTCCTGAGCTCTC...GCAGTGGGGACCATTGAGCACTTGAATGGCCTGTTTGTCTATGGGCTTGCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CAA 90 bp CAAGACAGGGACAAGCAGGCCCACCTGGTAAAGGATGGCTCTGACATTAGAACCAGAGCTTTTCCTTCATaGTCAGGAGAGCTCAAAATC +
Preference number: 5 (lower is better)
Translates to: QDRDKQAHLVKDGSDIRTRAFPS*SGELKI
Trigger: GATTTTGAGCTCTCCTGACAATGAAGGAAAAGCTCT...GGTTCTAATGTCAGAGCCATCCTTTACCAGGTGGGCCTGCTTGTCCCTGTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CAA 90 bp CCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTTCTCTGACATGTACTTCTaGGCAATGGGCAAGGACATC +
Preference number: 5 (lower is better)
Translates to: PFNLVFGSGSCSCAQFYFSDMYF*AMGKDI
Trigger: GATGTCCTTGCCCATTGCCAAGAAGTACATGTCAGA...GAAATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CAA 90 bp GAAGAGGGCTTCACAACCATCTTCACTCGTCATTGTCTGCCTCTGATCCATAATCACCTCACCTTGTCTTaGTTTCGCAGCACAGACAGA +
Preference number: 5 (lower is better)
Translates to: EEGFTTIFTRHCLPLIHNHLTLS*FRSTDR
Trigger: TCTGTCTGTGCTGCGAAACAAAGACAAGGTGAGGTG...ATTATGGATCAGAGGCAGACAATGACGAGTGAAGATGGTTGTGAAGCCCTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CAA 90 bp ACTCTAGCCTGGCATCACGGAGACTCCAAGAGCCACGGACAATGGGAAAGAAGTCCTCCACTTATTTACTaGCAAAATGGGGATCTAACA +
Preference number: 5 (lower is better)
Translates to: TLAWHHGDSKSHGQWERSPPLIY*QNGDLT
Trigger: TGTTAGATCCCCATTTTGCAAGTAAATAAGTGGAGG...ACTTCTTTCCCATTGTCCGTGGCTCTTGGAGTCTCCGTGATGCCAGGCTAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS TCA 90 bp TACAGTTCCAGGAGTGTGGAGGGACCCTTCTCAGCTGTGAGATTATaGACCCAAGGTTTAAAGCTCCAAAGTTTTGCTGTAGTGTGGATG +
Preference number: 5 (lower is better)
Translates to: YSSRSVEGPFSAVRL*TQGLKLQSFAVVWM
Trigger: CATCCACACTACAGCAAAACTTTGGAGCTTTAAACCTTGGGTTCATAATCTCACAGCTGAGAAGGGTCCCTCCACACTCCTGGAACTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359359.6
CDS TCA 90 bp ATTCTGAGCTGGCAGTTCGGAAACCACGTGTCCCTTGATCACAACTaGGCGGCTGAGAACTGGAAAATGATTGACTACAATGATTCATGC +
Preference number: 5 (lower is better)
Translates to: ILSWQFGNHVSLDHN*AAENWKMIDYNDSC
Trigger: GCATGAATCATTGTAGTCAATCATTTTCCAGTTCTCAGCCGCTCAGTTGTGATCAAGGGACACGTGGTTTCCGAACTGCCAGCTCAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CAA 90 bp TTCCACTTTGCTTGGGAAACTACAAGAACTTCTTTAATCAGCCATGGCCTTCCATGTTTACTGGAGCTGTaGTCCTCTCCCTCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: FHFAWETTRTSLISHGLPCLLEL*SSPSAA
Trigger: TGCTGCAGAGGGAGAGGACAACAGCTCCAGTAAACA...TGGAAGGCCATGGCTGATTAAAGAAGTTCTTGTAGTTTCCCAAGCAAAGTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359359.6
CDS-3UTR CAA 90 bp ACTCTAGCCTGGCATCACGGAGACTCCAAGAGCCACGGACAATGGGAAAGAAGTGAAGAAAGCATTACCTaGGGAGTTACCATTTTGAAT +
Preference number: 5 (lower is better)
Translates to: TLAWHHGDSKSHGQWERSEESIT*GVTILN
Trigger: ATTCAAAATGGTAACTCCCAAGGTAATGCTTTCTTC...ACTTCTTTCCCATTGTCCGTGGCTCTTGGAGTCTCCGTGATGCCAGGCTAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR CAA 90 bp CCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTATTTAACTCTGCTTGTCCTTaGCAAGCCCATAGACAAACA +
Preference number: 5 (lower is better)
Translates to: PFQPGFRLWKLFLCTVLFNSACP*QAHRQT
Trigger: TGTTTGTCTATGGGCTTGCAAAGGACAAGCAGAGTT...AAATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CAA 90 bp GAAGAGGGCTTCACAACCATCTTCACTCGTCATTGTCTGCCTCTGATCCATAATAGGCCTCTAAAGCACTaGTTTACACATAGCCCTTCC +
Preference number: 5 (lower is better)
Translates to: EEGFTTIFTRHCLPLIHNRPLKH*FTHSPS
Trigger: GGAAGGGCTATGTGTAAACAAGTGCTTTAGAGGCCT...ATTATGGATCAGAGGCAGACAATGACGAGTGAAGATGGTTGTGAAGCCCTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CAA 90 bp CTTTGCAAGCCCATAGACAAACAGGCCATTCAAGTGCTCAATGGTCCCCACTGCCATTTGCTTTGGGGTTaGAACATTCACTACGAAAGT +
Preference number: 5 (lower is better)
Translates to: LCKPIDKQAIQVLNGPHCHLLWG*NIHYES
Trigger: ACTTTCGTAGTGAATGTTCAAACCCCAAAGCAAATG...GCAGTGGGGACCATTGAGCACTTGAATGGCCTGTTTGTCTATGGGCTTGCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CAA 90 bp TTTCCCCTTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTGCACAGTTCTAGATTAATCCCAAGGTaGCGAGAACCTTATACACAA +
Preference number: 5 (lower is better)
Translates to: FPLSTWFSALEAVPVHSSRLIPR*REPYTQ
Trigger: TTGTGTATAAGGTTCTCGCAACCTTGGGATTAATCT...AGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAAGGGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS-3UTR CAA 90 bp TTCCACTTTGCTTGGGAAACTACAAGAACTTCTTTAATCAGCCATGGCCTTCCACACCTCACCTTGTCTTaGTTTCGCAGCACAGACAGA +
Preference number: 5 (lower is better)
Translates to: FHFAWETTRTSLISHGLPHLTLS*FRSTDR
Trigger: TCTGTCTGTGCTGCGAAACAAAGACAAGGTGAGGTG...TGGAAGGCCATGGCTGATTAAAGAAGTTCTTGTAGTTTCCCAAGCAAAGTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359359.6
ENST00000480824.7
CDS-3UTR CAA 90 bp AAATTATGCAGGGCAGGGAAACCAGAGACACTGAGGGACCTGGACAACAGACAACGTACACAAGTTTTGTaGTTCCTGTATTCATCCACA +
Preference number: 5 (lower is better)
Translates to: KLCRAGKPETLRDLDNRQRTQVL*FLYSST
Trigger: TGTGGATGAATACAGGAACAACAAAACTTGTGTACG...TTGTCTGTTGTCCAGGTCCCTCAGTGTCTCTGGTTTCCCTGCCCTGCATAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CAA 90 bp CTTTGCAAGCCCATAGACAAACAGGCCATTCAAGTGCTCAATGGTCCCCACTGCATACGTACACAAGTTTaGTTGTTCCTGTATTCATCC +
Preference number: 5 (lower is better)
Translates to: LCKPIDKQAIQVLNGPHCIRTQV*LFLYSS
Trigger: GGATGAATACAGGAACAACAAAACTTGTGTACGTAT...GCAGTGGGGACCATTGAGCACTTGAATGGCCTGTTTGTCTATGGGCTTGCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CAA 90 bp TTTTTCATCAACCATAATAAGTATGGTATCCATTCACTACTTGACTGCTGGAGAAGGGGCTTTCCCGTCTaGATCACCAGTGGATGGAGC +
Preference number: 5 (lower is better)
Translates to: FFINHNKYGIHSLLDCWRRGFPV*ITSGWS
Trigger: GCTCCATCCACTGGTGATCAAGACGGGAAAGCCCCT...TCTCCAGCAGTCAAGTAGTGAATGGATACCATACTTATTATGGTTGATGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CAA 90 bp AGTTACCATTTTGAATTATTATATAATCAGACTCTAGCCTGGCATCACGGAGACGACCCACAACTGGAATaGAGCAGAGTCCCTCCTCTG +
Preference number: 5 (lower is better)
Translates to: SYHFELLYNQTLAWHHGDDPQLE*SRVPPL
Trigger: CAGAGGAGGGACTCTGCTCAATTCCAGTTGTGGGTC...GTCTCCGTGATGCCAGGCTAGAGTCTGATTATATAATAATTCAAAATGGTAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CAA 90 bp TTTTTCATCAACCATAATAAGTATGGTATCCATTCACTACTTGACTGCTGGAGAGCTTCCGTGTTTCATTaGCTACAGAGCTGTCTCCAC +
Preference number: 5 (lower is better)
Translates to: FFINHNKYGIHSLLDCWRASVFH*LQSCLH
Trigger: GTGGAGACAGCTCTGTAGCAAATGAAACACGGAAGC...TCTCCAGCAGTCAAGTAGTGAATGGATACCATACTTATTATGGTTGATGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS-3UTR CAA 90 bp TTCCACTTTGCTTGGGAAACTACAAGAACTTCTTTAATCAGCCATGGCCTTCCAATGCAAACATTTGCTTaGGGGTTTGAACATTCACTA +
Preference number: 5 (lower is better)
Translates to: FHFAWETTRTSLISHGLPMQTFA*GFEHSL
Trigger: TAGTGAATGTTCAAACCCCAAAGCAAATGTTTGCAT...TGGAAGGCCATGGCTGATTAAAGAAGTTCTTGTAGTTTCCCAAGCAAAGTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS TCA 72 bp CCGATATCCCCTGGCTCTATTGGCATGGCCACAGACTaGCAATGTCTTCGGCACTGGAAGGGAGGGATGAGC +
Preference number: 6 (lower is better)
Translates to: PISPGSIGMATD*QCLRHWKGGMS
Trigger: GCTCATCCCTCCCTTCCAGTGCCGAAGACATTGTCAGTCTGTGGCCATGCCAATAGAGCCAGGGGATATCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS CCA 72 bp ATGGGAACCACCGCTCAGGAAAGCAGCGCCACCACTTaGCGAAAAACCCTTCAGAGAAGCCTTCTGTCGCCT +
Preference number: 6 (lower is better)
Translates to: MGTTAQESSATT*RKTLQRSLLSP
Trigger: AGGCGACAGAAGGCTTCTCTGAAGGGTTTTTCGCCAAGTGGTGGCGCTGCTTTCCTGAGCGGTGGTTCCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS CAA 72 bp AATGGGAACCACCGCTCAGGAAAGCAGCGCCACCACTaGGCGAAAAACCCTTCAGAGAAGCCTTCTGTCGCC +
Preference number: 6 (lower is better)
Translates to: NGNHRSGKQRHH*AKNPSEKPSVA
Trigger: GGCGACAGAAGGCTTCTCTGAAGGGTTTTTCGCCAAGTGGTGGCGCTGCTTTCCTGAGCGGTGGTTCCCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS CCA 72 bp TCCAACAGGGGCTTTCCCGTCTTGATCACCAGTGGATaGAGCCTCTCAAATTTCCTTGGGGCGTCTTCCAGG +
Preference number: 6 (lower is better)
Translates to: SNRGFPVLITSG*SLSNFLGASSR
Trigger: CCTGGAAGACGCCCCAAGGAAATTTGAGAGGCTCCATCCACTGGTGATCAAGACGGGAAAGCCCCTGTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS CCA 72 bp GGTGGTGTCGACATAGCCGATATCCCCTGGCTCTATTaGCATGGCCACAGACTGACAATGTCTTCGGCACTG +
Preference number: 6 (lower is better)
Translates to: GGVDIADIPWLY*HGHRLTMSSAL
Trigger: CAGTGCCGAAGACATTGTCAGTCTGTGGCCATGCCAATAGAGCCAGGGGATATCGGCTATGTCGACACCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS CAA 72 bp GGGTGGTGTCGACATAGCCGATATCCCCTGGCTCTATaGGCATGGCCACAGACTGACAATGTCTTCGGCACT +
Preference number: 6 (lower is better)
Translates to: GWCRHSRYPLAL*AWPQTDNVFGT
Trigger: AGTGCCGAAGACATTGTCAGTCTGTGGCCATGCCAATAGAGCCAGGGGATATCGGCTATGTCGACACCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS TCA 72 bp AATGGGCAAGGACATCAGCCTAATGTGATGGATGAGTaGGCGCCAGGTGTGAGCTCCAGAAAGCACTGGCTC +
Preference number: 6 (lower is better)
Translates to: NGQGHQPNVMDE*APGVSSRKHWL
Trigger: GAGCCAGTGCTTTCTGGAGCTCACACCTGGCGCTCACTCATCCATCACATTAGGCTGATGTCCTTGCCCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS GCA 72 bp CCAGTGCAGTTGGCAGGAATGGGCTCTGACTCATTCTaGTCACAGTCGTTTGTCCACCAGGGGTCAAAGTCT +
Preference number: 6 (lower is better)
Translates to: PVQLAGMGSDSF*SQSFVHQGSKS
Trigger: AGACTTTGACCCCTGGTGGACAAACGACTGTGAGCAGAATGAGTCAGAGCCCATTCCTGCCAACTGCACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS CCA 72 bp TCACCTTCAGGTGTTTCTGGGCACAGCCAGTGCAGTTaGCAGGAATGGGCTCTGACTCATTCTGCTCACAGT +
Preference number: 6 (lower is better)
Translates to: SPSGVSGHSQCS*QEWALTHSAHS
Trigger: ACTGTGAGCAGAATGAGTCAGAGCCCATTCCTGCCAACTGCACTGGCTGTGCCCAGAAACACCTGAAGGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS CCA 72 bp TGTCGACATAGCCGATATCCCCTGGCTCTATTGGCATaGCCACAGACTGACAATGTCTTCGGCACTGGAAGG +
Preference number: 6 (lower is better)
Translates to: CRHSRYPLALLA*PQTDNVFGTGR
Trigger: CCTTCCAGTGCCGAAGACATTGTCAGTCTGTGGCCATGCCAATAGAGCCAGGGGATATCGGCTATGTCGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS CAA 72 bp ATCACCTTCAGGTGTTTCTGGGCACAGCCAGTGCAGTaGGCAGGAATGGGCTCTGACTCATTCTGCTCACAG +
Preference number: 6 (lower is better)
Translates to: ITFRCFWAQPVQ*AGMGSDSFCSQ
Trigger: CTGTGAGCAGAATGAGTCAGAGCCCATTCCTGCCAACTGCACTGGCTGTGCCCAGAAACACCTGAAGGTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS GCA 72 bp CAGACGATCCAATCTGCAGGTTCTGTGATCCCCAGCTaGTGTGAGAGATCAATAGACACAAGTGGATCCTGC +
Preference number: 6 (lower is better)
Translates to: QTIQSAGSVIPS*CERSIDTSGSC
Trigger: GCAGGATCCACTTGTGTCTATTGATCTCTCACAGCAGCTGGGGATCACAGAACCTGCAGATTGGATCGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359359.6
CDS CCA 72 bp CTTGATCACCAGTGGATGGAGCCTCTCAAATTTCCTTaGGGCGTCTTCCAGGAGCATCACCTTCAGGTGTTT +
Preference number: 6 (lower is better)
Translates to: LDHQWMEPLKFP*GVFQEHHLQVF
Trigger: AAACACCTGAAGGTGATGCTCCTGGAAGACGCCCCAAGGAAATTTGAGAGGCTCCATCCACTGGTGATCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS TCA 72 bp GATCCAATCTGCAGGTTCTGTGATCCCCAGCTGCTGTaGGAGATCAATAGACACAAGTGGATCCTGCAGGTA +
Preference number: 6 (lower is better)
Translates to: DPICRFCDPQLL*EINRHKWILQV
Trigger: TACCTGCAGGATCCACTTGTGTCTATTGATCTCTCACAGCAGCTGGGGATCACAGAACCTGCAGATTGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359359.6
CDS CCA 72 bp GTAGTGTGGATGGCAAGGACAGTCTTTCTCTTTCTCTaGTGTTCTCAGACGATCCAATCTGCAGGTTCTGTG +
Preference number: 6 (lower is better)
Translates to: VVWMARTVFLFL*CSQTIQSAGSV
Trigger: CACAGAACCTGCAGATTGGATCGTCTGAGAACACCAGAGAAAGAGAAAGACTGTCCTTGCCATCCACACTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359359.6
CDS TCA 72 bp TTCATCACCCCCATGCAGAGGAACTCCCTTATTTTCTaGCATGTACTTCTTGGCAATGGGCAAGGACATCAG +
Preference number: 6 (lower is better)
Translates to: FITPMQRNSLIF*HVLLGNGQGHQ
Trigger: CTGATGTCCTTGCCCATTGCCAAGAAGTACATGTCAGAAAATAAGGGAGTTCCTCTGCATGGGGGTGATGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS TCA 72 bp TGGCAGTTCGGAAACCACGTGTCCCTTGATCACAACTaGGCGGCTGAGAACTGGAAAATGATTGACTACAAT +
Preference number: 6 (lower is better)
Translates to: WQFGNHVSLDHN*AAENWKMIDYN
Trigger: ATTGTAGTCAATCATTTTCCAGTTCTCAGCCGCTCAGTTGTGATCAAGGGACACGTGGTTTCCGAACTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480824.7
CDS GCA 72 bp TCAAGAGTCCTGGAGCAGTTCCATAATACTCCTGTCTaGCCTGACCTTTTTGTTTACTGGAGCTGTTGTCCT +
Preference number: 6 (lower is better)
Translates to: SRVLEQFHNTPV*PDLFVYWSCCP
Trigger: AGGACAACAGCTCCAGTAAACAAAAAGGTCAGGGCAGACAGGAGTATTATGGAACTGCTCCAGGACTCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359359.6
CDS GCA 72 bp TTTCAACCTGGTTTTCGGCTCTGGAAGCTGTTCCTGTaGACAGTTCTATTTCCTACAGTTCTGAGAAAGCGG +
Preference number: 6 (lower is better)
Translates to: FQPGFRLWKLFL*TVLFPTVLRKR
Trigger: CCGCTTTCTCAGAACTGTAGGAAATAGAACTGTGCACAGGAACAGCTTCCAGAGCCGAAAACCAGGTTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7
CDS TCA 72 bp CCAAATCAACAGTCTCTGAAAGTTTGTCATAAATGCTaGTCTCGTTGGCAGCAAGATCCATGTCTTCCAATA +
Preference number: 6 (lower is better)
Translates to: PNQQSLKVCHKC*SRWQQDPCLPI
Trigger: TATTGGAAGACATGGATCTTGCTGCCAACGAGATCAGCATTTATGACAAACTTTCAGAGACTGTTGATTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355190.7
ENST00000359359.6
ENST00000373685.1
ENST00000480824.7