Pregenerated sensors for C6ORF163 (Homo sapiens)
Ensembl gene IDs: ENSG00000203872Ensembl transcript IDs: ENST00000369574.2, ENST00000388923.5, ENST00000608326.1, ENST00000608891.1
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TCCACAGCTTCGACCTTCTCTCTGTGGCATTCCATCATAATCCTTTaGATTCTGTGGACCATGCGCTGTTCTGCAGCCAAGTGCTCTCTC | + |
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Preference number: 5 (lower is better) Translates to: STASTFSLWHSIIIL*ILWTMRCSAAKCSL Trigger: GAGAGAGCACTTGGCTGCAGAACAGCGCATGGTCCACAGAATCCAAAGGATTATGATGGAATGCCACAGAGAGAAGGTCGAAGCTGTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000369574.2 ENST00000388923.5 ENST00000608326.1 |
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| CDS CCA 90 bp | GAGGTCTTAGCACATTATACAGCTCTCTCTCTCCCTGTTCCTATTTaGGTGCTAGGGCTAGCATCAGGAGAAGGGAAGTGGAATGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: EVLAHYTALSLPVPI*VLGLASGEGKWNAF Trigger: GAAGGCATTCCACTTCCCTTCTCCTGATGCTAGCCCTAGCACCCAAATAGGAACAGGGAGAGAGAGAGCTGTATAATGTGCTAAGACCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000608326.1 |
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| CDS GCA 90 bp | CTGGATCCACATTCCTCCTTTCCCAGCTGCCGGAGTAAGTCTAGCTaGAGCAGTAAACCATTAAGCCAACTCACTAAAAGGGTAAGCATG | + |
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Preference number: 5 (lower is better) Translates to: LDPHSSFPSCRSKSS*SSKPLSQLTKRVSM Trigger: CATGCTTACCCTTTTAGTGAGTTGGCTTAATGGTTTACTGCTGCAGCTAGACTTACTCCGGCAGCTGGGAAAGGAGGAATGTGGATCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608326.1 |
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| CDS TCA 90 bp | GCTCACTACATACCCCACCCATACTGCTTGATCTTTCCAGGACTTTaGACTCTTGCAGCACCTATGTGCTATTTGTACCAGTCCATCCAG | + |
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Preference number: 5 (lower is better) Translates to: AHYIPHPYCLIFPGL*TLAAPMCYLYQSIQ Trigger: CTGGATGGACTGGTACAAATAGCACATAGGTGCTGCAAGAGTTCAAAGTCCTGGAAAGATCAAGCAGTATGGGTGGGGTATGTAGTGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608891.1 |
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| CDS GCA 90 bp | CATACCCCACCCATACTGCTTGATCTTTCCAGGACTTTGAACTCTTaGAGCACCTATGTGCTATTTGTACCAGTCCATCCAGCCTTGCTT | + |
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Preference number: 5 (lower is better) Translates to: HTPPILLDLSRTLNS*STYVLFVPVHPALL Trigger: AAGCAAGGCTGGATGGACTGGTACAAATAGCACATAGGTGCTGCAAGAGTTCAAAGTCCTGGAAAGATCAAGCAGTATGGGTGGGGTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608891.1 |
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| CDS TCA 90 bp | ATTTCCTCCACGGCTTTGCTCACTACATACCCCACCCATACTGCTTaGTCTTTCCAGGACTTTGAACTCTTGCAGCACCTATGTGCTATT | + |
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Preference number: 5 (lower is better) Translates to: ISSTALLTTYPTHTA*SFQDFELLQHLCAI Trigger: AATAGCACATAGGTGCTGCAAGAGTTCAAAGTCCTGGAAAGATCAAGCAGTATGGGTGGGGTATGTAGTGAGCAAAGCCGTGGAGGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608891.1 |
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| CDS GCA 90 bp | CAGTTTATCCATCATATTGCCAAGAGTGGCCTGATGTGTTTTCTCTaGTTCTTGAAGCACTTCCTGTACCTCTTCTTGCCTCTGCCTCTG | + |
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Preference number: 5 (lower is better) Translates to: QFIHHIAKSGLMCFL*FLKHFLYLFLPLPL Trigger: CAGAGGCAGAGGCAAGAAGAGGTACAGGAAGTGCTTCAAGAAGCAGAGAAAACACATCAGGCCACTCTTGGCAATATGATGGATAAACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000369574.2 ENST00000388923.5 ENST00000608326.1 ENST00000608891.1 |
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| CDS GCA 90 bp | TCCTATTTGGGTGCTAGGGCTAGCATCAGGAGAAGGGAAGTGGAATaGCTTCACATTACATGCCTTTCTTTAGCATGTGGTTCTTTGTGG | + |
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Preference number: 5 (lower is better) Translates to: SYLGARASIRRREVE*LHITCLSLACGSLW Trigger: CCACAAAGAACCACATGCTAAAGAAAGGCATGTAATGTGAAGGCATTCCACTTCCCTTCTCCTGATGCTAGCCCTAGCACCCAAATAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000608326.1 |
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| CDS CCA 90 bp | AATGGTGCTAAAAGCCCCTGCCATAGAAGGTATGGGCACCAGATTTaGGAAGATTTAAGTAGTTGCTCCTTCCCAGACTCTAGCATTAAG | + |
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Preference number: 5 (lower is better) Translates to: NGAKSPCHRRYGHQI*EDLSSCSFPDSSIK Trigger: CTTAATGCTAGAGTCTGGGAAGGAGCAACTACTTAAATCTTCCCAAATCTGGTGCCCATACCTTCTATGGCAGGGGCTTTTAGCACCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388923.5 |
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| CDS GCA 90 bp | GCATTCCATCATAATCCTTTGGATTCTGTGGACCATGCGCTGTTCTaGAGCCAAGTGCTCTCTCTTCATTTCGTCATCCATGTTTTGATA | + |
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Preference number: 5 (lower is better) Translates to: AFHHNPLDSVDHALF*SQVLSLHFVIHVLI Trigger: TATCAAAACATGGATGACGAAATGAAGAGAGAGCACTTGGCTGCAGAACAGCGCATGGTCCACAGAATCCAAAGGATTATGATGGAATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000369574.2 ENST00000388923.5 ENST00000608326.1 |
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| CDS CCA 90 bp | AAGGGAAGTGGAATGCCTTCACATTACATGCCTTTCTTTAGCATGTaGTTCTTTGTGGGTTTAACTGCTTCAGTATGGAGTGAGCTAAGG | + |
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Preference number: 5 (lower is better) Translates to: KGSGMPSHYMPFFSM*FFVGLTASVWSELR Trigger: CCTTAGCTCACTCCATACTGAAGCAGTTAAACCCACAAAGAACCACATGCTAAAGAAAGGCATGTAATGTGAAGGCATTCCACTTCCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000608326.1 |
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| CDS CCA 90 bp | AGGGTAAGCATGGACAGATTGAAAGCCTTGATGCCAGATTTCCCTTaGGTTTCTCTGTTAAAAGAGTCAAGAAATTCCATTTCATGCAGT | + |
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Preference number: 5 (lower is better) Translates to: RVSMDRLKALMPDFP*VSLLKESRNSISCS Trigger: ACTGCATGAAATGGAATTTCTTGACTCTTTTAACAGAGAAACCCAAGGGAAATCTGGCATCAAGGCTTTCAATCTGTCCATGCTTACCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608326.1 |
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| CDS GCA 72 bp | CCCAGCCTGCAGTGCAGTGTCGCCATTTCGGCTCACTaGAACCTCCGCCTCCCGTTTCAAGTGATTCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: PSLQCSVAISAH*NLRLPFQVILL Trigger: CAGGAGAATCACTTGAAACGGGAGGCGGAGGTTGCAGTGAGCCGAAATGGCGACACTGCACTGCAGGCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000608326.1 |
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| CDS CAA 72 bp | GGAGGGAATTCACAGCACTGTCAGGCCTGGATAGAGTaGGTCATTCCCCTCATCACACCCAGTCCACACAGC | + |
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Preference number: 6 (lower is better) Translates to: GGNSQHCQAWIE*VIPLITPSPHS Trigger: GCTGTGTGGACTGGGTGTGATGAGGGGAATGACCAACTCTATCCAGGCCTGACAGTGCTGTGAATTCCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608326.1 |
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| CDS GCA 72 bp | AATTTCCTCCACGGCTTTGCTTTTCTGGGCCTGGATTaGTTCCTGGGCGATGTGTCTTTCTTCAGCCCTGGC | + |
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Preference number: 6 (lower is better) Translates to: NFLHGFAFLGLD*FLGDVSFFSPG Trigger: GCCAGGGCTGAAGAAAGACACATCGCCCAGGAAGCAATCCAGGCCCAGAAAAGCAAAGCCGTGGAGGAAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000369574.2 ENST00000388923.5 ENST00000608326.1 |
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| CDS CAA 90 bp | CTCCACAGCTTCGACCTTCTCTCTGTGGCATTCCATCATAATCCTTaGGATTCTGTGGACCATGCGCTGTTCTGCAGCCAAGTGCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: LHSFDLLSVAFHHNP*DSVDHALFCSQVLS Trigger: AGAGAGCACTTGGCTGCAGAACAGCGCATGGTCCACAGAATCCAAAGGATTATGATGGAATGCCACAGAGAGAAGGTCGAAGCTGTGGAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000369574.2 ENST00000388923.5 ENST00000608326.1 |
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| CDS CCA 72 bp | TTCCCCTCATCACACCCAGTCCACACAGCAGACAACTaGGGAGGTGAAATAAATGCCCGAAGAAAGGGACAT | + |
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Preference number: 6 (lower is better) Translates to: FPSSHPVHTADN*GGEINARRKGH Trigger: ATGTCCCTTTCTTCGGGCATTTATTTCACCTCCCCAGTTGTCTGCTGTGTGGACTGGGTGTGATGAGGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608326.1 |
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| CDS CCA 72 bp | TCGACCTTCTCTCTGTGGCATTCCATCATAATCCTTTaGATTCTGTGGACCATGCGCTGTTCTGCAGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: STFSLWHSIIIL*ILWTMRCSAAK Trigger: CTTGGCTGCAGAACAGCGCATGGTCCACAGAATCCAAAGGATTATGATGGAATGCCACAGAGAGAAGGTCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000369574.2 ENST00000388923.5 ENST00000608326.1 |
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| CDS CAA 90 bp | AGAGGTCTTAGCACATTATACAGCTCTCTCTCTCCCTGTTCCTATTaGGGTGCTAGGGCTAGCATCAGGAGAAGGGAAGTGGAATGCCTT | + |
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Preference number: 6 (lower is better) Translates to: RGLSTLYSSLSPCSY*GARASIRRREVECL Trigger: AAGGCATTCCACTTCCCTTCTCCTGATGCTAGCCCTAGCACCCAAATAGGAACAGGGAGAGAGAGAGCTGTATAATGTGCTAAGACCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000608326.1 |
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| CDS TCA 72 bp | ACGGCTTTGCTCACTACATACCCCACCCATACTGCTTaGTCTTTCCAGGACTTTGAACTCTTGCAGCACCTA | + |
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Preference number: 6 (lower is better) Translates to: TALLTTYPTHTA*SFQDFELLQHL Trigger: TAGGTGCTGCAAGAGTTCAAAGTCCTGGAAAGATCAAGCAGTATGGGTGGGGTATGTAGTGAGCAAAGCCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608891.1 |
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| CDS GCA 72 bp | CATTCCTCCTTTCCCAGCTGCCGGAGTAAGTCTAGCTaGAGCAGTAAACCATTAAGCCAACTCACTAAAAGG | + |
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Preference number: 6 (lower is better) Translates to: HSSFPSCRSKSS*SSKPLSQLTKR Trigger: CCTTTTAGTGAGTTGGCTTAATGGTTTACTGCTGCAGCTAGACTTACTCCGGCAGCTGGGAAAGGAGGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608326.1 |
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| CDS CAA 72 bp | ATTGCCAAGAGTGGCCTGATGTGTTTTCTCTGCTTCTaGAAGCACTTCCTGTACCTCTTCTTGCCTCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: IAKSGLMCFLCF*KHFLYLFLPLP Trigger: AGGCAGAGGCAAGAAGAGGTACAGGAAGTGCTTCAAGAAGCAGAGAAAACACATCAGGCCACTCTTGGCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000369574.2 ENST00000388923.5 ENST00000608326.1 ENST00000608891.1 |
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| CDS CAA 90 bp | CTGATGTGTTTTCTCTGCTTCTTGAAGCACTTCCTGTACCTCTTCTaGCCTCTGCCTCTGAGCTATGCCATAGAGGATGCTCATTTCATG | + |
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Preference number: 6 (lower is better) Translates to: LMCFLCFLKHFLYLF*PLPLSYAIEDAHFM Trigger: CATGAAATGAGCATCCTCTATGGCATAGCTCAGAGGCAGAGGCAAGAAGAGGTACAGGAAGTGCTTCAAGAAGCAGAGAAAACACATCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000369574.2 ENST00000388923.5 ENST00000608326.1 ENST00000608891.1 |
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| CDS CAA 90 bp | TGCTCACTACATACCCCACCCATACTGCTTGATCTTTCCAGGACTTaGAACTCTTGCAGCACCTATGTGCTATTTGTACCAGTCCATCCA | + |
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Preference number: 6 (lower is better) Translates to: CSLHTPPILLDLSRT*NSCSTYVLFVPVHP Trigger: TGGATGGACTGGTACAAATAGCACATAGGTGCTGCAAGAGTTCAAAGTCCTGGAAAGATCAAGCAGTATGGGTGGGGTATGTAGTGAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608891.1 |
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| CDS GCA 72 bp | CATAATCCTTTGGATTCTGTGGACCATGCGCTGTTCTaGAGCCAAGTGCTCTCTCTTCATTTCGTCATCCAT | + |
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Preference number: 6 (lower is better) Translates to: HNPLDSVDHALF*SQVLSLHFVIH Trigger: ATGGATGACGAAATGAAGAGAGAGCACTTGGCTGCAGAACAGCGCATGGTCCACAGAATCCAAAGGATTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000369574.2 ENST00000388923.5 ENST00000608326.1 |
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| CDS CCA 72 bp | AAAAGCCCCTGCCATAGAAGGTATGGGCACCAGATTTaGGAAGATTTAAGTAGTTGCTCCTTCCCAGACTCT | + |
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Preference number: 6 (lower is better) Translates to: KSPCHRRYGHQI*EDLSSCSFPDS Trigger: AGAGTCTGGGAAGGAGCAACTACTTAAATCTTCCCAAATCTGGTGCCCATACCTTCTATGGCAGGGGCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388923.5 |
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| CDS TCA 72 bp | ATACCCCACCCATACTGCTTGATCTTTCCAGGACTTTaGACTCTTGCAGCACCTATGTGCTATTTGTACCAG | + |
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Preference number: 6 (lower is better) Translates to: IPHPYCLIFPGL*TLAAPMCYLYQ Trigger: CTGGTACAAATAGCACATAGGTGCTGCAAGAGTTCAAAGTCCTGGAAAGATCAAGCAGTATGGGTGGGGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608891.1 |
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| CDS GCA 72 bp | GAAATCTTTCCAATTTGTCATGATTCCCAGTTGTTTTaGTATAGACAGCAGCTCCCCCTGGGTGTTAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: EIFPICHDSQLF*YRQQLPLGVSQ Trigger: CTGGCTAACACCCAGGGGGAGCTGCTGTCTATAGCAAAACAACTGGGAATCATGACAAATTGGAAAGATTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000369574.2 ENST00000388923.5 ENST00000608326.1 ENST00000608891.1 |
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| CDS GCA 72 bp | CCCATACTGCTTGATCTTTCCAGGACTTTGAACTCTTaGAGCACCTATGTGCTATTTGTACCAGTCCATCCA | + |
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Preference number: 6 (lower is better) Translates to: PILLDLSRTLNS*STYVLFVPVHP Trigger: TGGATGGACTGGTACAAATAGCACATAGGTGCTGCAAGAGTTCAAAGTCCTGGAAAGATCAAGCAGTATGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000608891.1 |
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| CDS CCA 72 bp | ATTCCCAGTTGTTTTGCTATAGACAGCAGCTCCCCCTaGGTGTTAGCCAGTTTATCCATCATATTGCCAAGA | + |
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Preference number: 6 (lower is better) Translates to: IPSCFAIDSSSP*VLASLSIILPR Trigger: TCTTGGCAATATGATGGATAAACTGGCTAACACCCAGGGGGAGCTGCTGTCTATAGCAAAACAACTGGGAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000369574.2 ENST00000388923.5 ENST00000608326.1 ENST00000608891.1 |
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| CDS CAA 72 bp | CATACCCCACCCATACTGCTTGATCTTTCCAGGACTTaGAACTCTTGCAGCACCTATGTGCTATTTGTACCA | + |
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Preference number: 6 (lower is better) Translates to: HTPPILLDLSRT*NSCSTYVLFVP Trigger: TGGTACAAATAGCACATAGGTGCTGCAAGAGTTCAAAGTCCTGGAAAGATCAAGCAGTATGGGTGGGGTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608891.1 |
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| CDS CAA 90 bp | CTGTTCTGCAGCCAAGTGCTCTCTCTTCATTTCGTCATCCATGTTTaGATACATCTCTGTCTTAGTTTTAGCTGTCACTTCCTGAGCCCA | + |
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Preference number: 6 (lower is better) Translates to: LFCSQVLSLHFVIHV*IHLCLSFSCHFLSP Trigger: TGGGCTCAGGAAGTGACAGCTAAAACTAAGACAGAGATGTATCAAAACATGGATGACGAAATGAAGAGAGAGCACTTGGCTGCAGAACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608326.1 |
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| CDS GCA 72 bp | GTGTCTGTCATTTGCTTCTTCAAGTGCTTTCTCCACTaGTTGTTTTTGACGTTCATTAGCCTGAGCCCATAC | + |
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Preference number: 6 (lower is better) Translates to: VSVICFFKCFLH*LFLTFISLSPY Trigger: GTATGGGCTCAGGCTAATGAACGTCAAAAACAAGCAGTGGAGAAAGCACTTGAAGAAGCAAATGACAGACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000388923.5 |
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| CDS CAA 72 bp | TCTGTCATTTGCTTCTTCAAGTGCTTTCTCCACTGCTaGTTTTTGACGTTCATTAGCCTGAGCCCATACTTC | + |
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Preference number: 6 (lower is better) Translates to: SVICFFKCFLHC*FLTFISLSPYF Trigger: GAAGTATGGGCTCAGGCTAATGAACGTCAAAAACAAGCAGTGGAGAAAGCACTTGAAGAAGCAAATGACAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000388923.5 |
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| CDS CAA 90 bp | CTGTTCTGCAGCCAAGTGCTCTCTCTTCATTTCGTCATCCATGTTTaGATACATCTCTGTCTTAGTTTTAGCTGTCACTTCCTGAAGCAA | + |
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Preference number: 6 (lower is better) Translates to: LFCSQVLSLHFVIHV*IHLCLSFSCHFLKQ Trigger: TTGCTTCAGGAAGTGACAGCTAAAACTAAGACAGAGATGTATCAAAACATGGATGACGAAATGAAGAGAGAGCACTTGGCTGCAGAACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369574.2 |
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| CDS GCA 72 bp | AGGTATGGGCACCAGATTTGGGAAGATTTAAGTAGTTaGTCCTTCCCAGACTCTAGCATTAAGTTGTTAACT | + |
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Preference number: 6 (lower is better) Translates to: RYGHQIWEDLSS*SFPDSSIKLLT Trigger: AGTTAACAACTTAATGCTAGAGTCTGGGAAGGAGCAACTACTTAAATCTTCCCAAATCTGGTGCCCATACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388923.5 |
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| CDS CCA 72 bp | CTTAAAAACACAGGGCAGCATATATTACGGTGGAGATaGACACATACTGCAAAAGCCCAACATTGTGTAGAA | + |
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Preference number: 6 (lower is better) Translates to: LKNTGQHILRWR*THTAKAQHCVE Trigger: TTCTACACAATGTTGGGCTTTTGCAGTATGTGTCCATCTCCACCGTAATATATGCTGCCCTGTGTTTTTAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000608326.1 |
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| CDS CCA 72 bp | GGAATGCCTTCACATTACATGCCTTTCTTTAGCATGTaGTTCTTTGTGGGTTTAACTGCTTCAGTATGGAGT | + |
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Preference number: 6 (lower is better) Translates to: GMPSHYMPFFSM*FFVGLTASVWS Trigger: ACTCCATACTGAAGCAGTTAAACCCACAAAGAACCACATGCTAAAGAAAGGCATGTAATGTGAAGGCATTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000608326.1 |
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| CDS CAA 72 bp | CTCACTAAAAGGGTAAGCATGGACAGATTGAAAGCCTaGATGCCAGATTTCCCTTGGGTTTCTCTGTTAAAA | + |
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Preference number: 6 (lower is better) Translates to: LTKRVSMDRLKA*MPDFPWVSLLK Trigger: TTTTAACAGAGAAACCCAAGGGAAATCTGGCATCAAGGCTTTCAATCTGTCCATGCTTACCCTTTTAGTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608326.1 |
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| CDS CAA 90 bp | AAGGGTAAGCATGGACAGATTGAAAGCCTTGATGCCAGATTTCCCTaGGGTTTCTCTGTTAAAAGAGTCAAGAAATTCCATTTCATGCAG | + |
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Preference number: 6 (lower is better) Translates to: KGKHGQIESLDARFP*GFSVKRVKKFHFMQ Trigger: CTGCATGAAATGGAATTTCTTGACTCTTTTAACAGAGAAACCCAAGGGAAATCTGGCATCAAGGCTTTCAATCTGTCCATGCTTACCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608326.1 |
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| CDS CAA 90 bp | TTAAGCCAACTCACTAAAAGGGTAAGCATGGACAGATTGAAAGCCTaGATGCCAGATTTCCCTTGGGTTTCTCTGTTAAAAGAGTCAAGA | + |
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Preference number: 6 (lower is better) Translates to: LSQLTKRVSMDRLKA*MPDFPWVSLLKESR Trigger: TCTTGACTCTTTTAACAGAGAAACCCAAGGGAAATCTGGCATCAAGGCTTTCAATCTGTCCATGCTTACCCTTTTAGTGAGTTGGCTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000608326.1 |
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| CDS CAA 90 bp | AGTAAACCATTAAGCCAACTCACTAAAAGGGTAAGCATGGACAGATaGAAAGCCTTGATGCCAGATTTCCCTTGGGTTTCTCTGTTAAAA | + |
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Preference number: 6 (lower is better) Translates to: SKPLSQLTKRVSMDR*KALMPDFPWVSLLK Trigger: TTTTAACAGAGAAACCCAAGGGAAATCTGGCATCAAGGCTTTCAATCTGTCCATGCTTACCCTTTTAGTGAGTTGGCTTAATGGTTTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608326.1 |
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| CDS CAA 90 bp | GACAACTGGGGAGGTGAAATAAATGCCCGAAGAAAGGGACATATTTaGTACACCCAAAGTAGAATGATGAGTGAATATTCAAGAGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: DNWGGEINARRKGHI*YTQSRMMSEYSRGL Trigger: AAGACCTCTTGAATATTCACTCATCATTCTACTTTGGGTGTACAAAATATGTCCCTTTCTTCGGGCATTTATTTCACCTCCCCAGTTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608326.1 |
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| CDS TCA 72 bp | TCCTGGCTTTCCTTTCCACCATTATCTAGTTATTTATaGGGGCTATTTAGGAGACACGTCCTTTTAGGAGAT | + |
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Preference number: 6 (lower is better) Translates to: SWLSFPPLSSYL*GLFRRHVLLGD Trigger: ATCTCCTAAAAGGACGTGTCTCCTAAATAGCCCTCATAAATAACTAGATAATGGTGGAAAGGAAAGCCAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000608326.1 |
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| CDS CAA 72 bp | GTTATGTTTCTGTCACTAGCAATTAAAAGTATATGTTaGGCGGCACAGAGTCTCCTACTAGTTCATCAGCGA | + |
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Preference number: 6 (lower is better) Translates to: VMFLSLAIKSIC*AAQSLLLVHQR Trigger: TCGCTGATGAACTAGTAGGAGACTCTGTGCCGCCAAACATATACTTTTAATTGCTAGTGACAGAAACATAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608326.1 |
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| CDS CAA 72 bp | CATGGACAGATTGAAAGCCTTGATGCCAGATTTCCCTaGGGTTTCTCTGTTAAAAGAGTCAAGAAATTCCAT | + |
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Preference number: 6 (lower is better) Translates to: HGQIESLDARFP*GFSVKRVKKFH Trigger: ATGGAATTTCTTGACTCTTTTAACAGAGAAACCCAAGGGAAATCTGGCATCAAGGCTTTCAATCTGTCCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608326.1 |
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| CDS CCA 72 bp | ATGGACAGATTGAAAGCCTTGATGCCAGATTTCCCTTaGGTTTCTCTGTTAAAAGAGTCAAGAAATTCCATT | + |
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Preference number: 6 (lower is better) Translates to: MDRLKALMPDFP*VSLLKESRNSI Trigger: AATGGAATTTCTTGACTCTTTTAACAGAGAAACCCAAGGGAAATCTGGCATCAAGGCTTTCAATCTGTCCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608326.1 |
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