Pregenerated sensors for C4ORF45 (Homo sapiens)
Ensembl gene IDs: ENSG00000164123Ensembl transcript IDs: ENST00000434826.3, ENST00000505647.1, ENST00000508011.1
Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CAAGGGTGCTGTGAGAATCTTCTGAAAATTAGGGATATAACTGCTTTTTACTGCATTTGGGCTTTAAGCTaGAGCGTACTCTTGCAAGAC | + |
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Preference number: 2 (lower is better) Translates to: QGCCENLLKIRDITAFYCIWALS*SVLLQD Trigger: GTCTTGCAAGAGTACGCTTCAGCTTAAAGCCCAAAT...GCAGTAAAAAGCAGTTATATCCCTAATTTTCAGAAGATTCTCACAGCACCCTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000434826.3 |
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| 3UTR-3UTR TCA 90 bp | CAACAAGGGTGCTGTGAGAATCTTCTGAAAATTAGGGATATAACTGCTTTTTACTGTCCTGGGGCAATATaGGAAGCACTTGTGGATTAT | + |
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Preference number: 2 (lower is better) Translates to: QQGCCENLLKIRDITAFYCPGAI*EALVDY Trigger: ATAATCCACAAGTGCTTCTCATATTGCCCCAGGACA...GTAAAAAGCAGTTATATCCCTAATTTTCAGAAGATTCTCACAGCACCCTTGTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000434826.3 |
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| 3UTR TCA 72 bp | AGCGTACTCTTGCAAGACATCTGTCCTGGGGCAATATaGGAAGCACTTGTGGATTATTATGATCTTATTTTT | + |
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Preference number: 3 (lower is better) Translates to: SVLLQDICPGAI*EALVDYYDLIF Trigger: AAAAATAAGATCATAATAATCCACAAGTGCTTCTCATATTGCCCCAGGACAGATGTCTTGCAAGAGTACGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434826.3 |
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| CDS-3UTR TCA 90 bp | TATTTGGGCTTTAAGCTGAAGCGTACTCTTGCAAGACATCTGTCCTGGGGCAATTCCTCTCCCTGCTTGTaGCCTGCACCAGGTGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: YLGFKLKRTLARHLSWGNSSPCL*PAPGGC Trigger: GCAACCACCTGGTGCAGGTCACAAGCAGGGAGAGGA...ATTGCCCCAGGACAGATGTCTTGCAAGAGTACGCTTCAGCTTAAAGCCCAAATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434826.3 |
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| CDS-3UTR CCA 90 bp | AAGCTGAAGCGTACTCTTGCAAGACATCTGTCCTGGGGCAATATGAGAAGCACTCTTCGGCAGCTTAGGTaGTTTGGAAGCTCTTGGCAA | + |
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Preference number: 4 (lower is better) Translates to: KLKRTLARHLSWGNMRSTLRQLR*FGSSWQ Trigger: TTGCCAAGAGCTTCCAAACCACCTAAGCTGCCGAAG...AGTGCTTCTCATATTGCCCCAGGACAGATGTCTTGCAAGAGTACGCTTCAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434826.3 |
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| CDS-3UTR TCA 90 bp | AAGCTGAAGCGTACTCTTGCAAGACATCTGTCCTGGGGCAATATGAGAAGCACTTGTCCTGGGGCAATATaGGAAGCACTTGTGGATTAT | + |
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Preference number: 4 (lower is better) Translates to: KLKRTLARHLSWGNMRSTCPGAI*EALVDY Trigger: ATAATCCACAAGTGCTTCTCATATTGCCCCAGGACA...AGTGCTTCTCATATTGCCCCAGGACAGATGTCTTGCAAGAGTACGCTTCAGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000434826.3 |
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| CDS-3UTR TCA 90 bp | AGCCCCATAACCTGGGGTCAAATCCAAGTTCTGCTACTTCCTAACCATGTACTCATTTGGGCTTTAAGCTaGAGCGTACTCTTGCAAGAC | + |
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Preference number: 4 (lower is better) Translates to: SPITWGQIQVLLLPNHVLIWALS*SVLLQD Trigger: GTCTTGCAAGAGTACGCTTCAGCTTAAAGCCCAAAT...GAGTACATGGTTAGGAAGTAGCAGAACTTGGATTTGACCCCAGGTTATGGGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000434826.3 |
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| CDS-3UTR GCA 90 bp | TATTTGGGCTTTAAGCTGAAGCGTACTCTTGCAAGACATCTGTCCTGGGGCAATTCGAAAGCACTCATATaGCAGGCAAAAGAAGCGCGA | + |
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Preference number: 4 (lower is better) Translates to: YLGFKLKRTLARHLSWGNSKALI*QAKEAR Trigger: TCGCGCTTCTTTTGCCTGGCATATGAGTGCTTTCGA...ATTGCCCCAGGACAGATGTCTTGCAAGAGTACGCTTCAGCTTAAAGCCCAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000434826.3 |
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| CDS-3UTR TCA 90 bp | AGCCCCATAACCTGGGGTCAAATCCAAGTTCTGCTACTTCCTAACCATGTACTCTCTTCATACTTGATATaGAAGCCACTCCCCAGTCTT | + |
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Preference number: 4 (lower is better) Translates to: SPITWGQIQVLLLPNHVLSSYLI*KPLPSL Trigger: AAGACTGGGGAGTGGCTTTCATATCAAGTATGAAGA...GAGTACATGGTTAGGAAGTAGCAGAACTTGGATTTGACCCCAGGTTATGGGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000434826.3 |
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| CDS-3UTR TCA 90 bp | GTTTATTTGGGCTTTAAGCTGAAGCGTACTCTTGCAAGACATCTGTCCTGGGGCTTAGTTCTTCATACTTaGTATGAAAGCCACTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: VYLGFKLKRTLARHLSWGLVLHT*YESHSP Trigger: TGGGGAGTGGCTTTCATATCAAGTATGAAGAACTAA...GCCCCAGGACAGATGTCTTGCAAGAGTACGCTTCAGCTTAAAGCCCAAATAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000434826.3 |
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| CDS-3UTR GCA 90 bp | AGAAAGATAGTACCTGTTCAACAAGGGTGCTGTGAGAATCTTCTGAAAATTAGGGCTGAAGCGTACTCTTaGAAGACATCTGTCCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: RKIVPVQQGCCENLLKIRAEAYS*KTSVLG Trigger: CCCCAGGACAGATGTCTTGCAAGAGTACGCTTCAGC...CCTAATTTTCAGAAGATTCTCACAGCACCCTTGTTGAACAGGTACTATCTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434826.3 |
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| CDS-3UTR TCA 90 bp | AGCCCCATAACCTGGGGTCAAATCCAAGTTCTGCTACTTCCTAACCATGTACTCGCCACTCCCCAGTCTTaGTTTGTTGATAAAATTATA | + |
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Preference number: 4 (lower is better) Translates to: SPITWGQIQVLLLPNHVLATPQS*FVDKII Trigger: TATAATTTTATCAACAAATCAAGACTGGGGAGTGGC...GAGTACATGGTTAGGAAGTAGCAGAACTTGGATTTGACCCCAGGTTATGGGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000434826.3 |
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| CDS-3UTR TCA 90 bp | ACTGTTTATTTGGGCTTTAAGCTGAAGCGTACTCTTGCAAGACATCTGTCCTGGGGTTGCCATGGGTTTTaGTATCTGTGGGTTATTGAA | + |
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Preference number: 4 (lower is better) Translates to: TVYLGFKLKRTLARHLSWGCHGF*YLWVIE Trigger: TTCAATAACCCACAGATATCAAAACCCATGGCAACC...CCAGGACAGATGTCTTGCAAGAGTACGCTTCAGCTTAAAGCCCAAATAAACAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000434826.3 |
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| CDS-3UTR GCA 90 bp | GTTTATTTGGGCTTTAAGCTGAAGCGTACTCTTGCAAGACATCTGTCCTGGGGCTCAAATCAGTTAAGCTaGACCAGAAAGAACGAAAGA | + |
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Preference number: 4 (lower is better) Translates to: VYLGFKLKRTLARHLSWGSNQLS*TRKNER Trigger: TCTTTCGTTCTTTCTGGTGCAGCTTAACTGATTTGA...GCCCCAGGACAGATGTCTTGCAAGAGTACGCTTCAGCTTAAAGCCCAAATAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434826.3 |
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| CDS-3UTR CCA 90 bp | ACTGTTTATTTGGGCTTTAAGCTGAAGCGTACTCTTGCAAGACATCTGTCCTGGCAGGACATGAGGTTTTaGTTGCCATGGGTTTTGATA | + |
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Preference number: 4 (lower is better) Translates to: TVYLGFKLKRTLARHLSWQDMRF*LPWVLI Trigger: TATCAAAACCCATGGCAACCAAAACCTCATGTCCTG...CCAGGACAGATGTCTTGCAAGAGTACGCTTCAGCTTAAAGCCCAAATAAACAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000434826.3 |
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| CDS-3UTR TCA 90 bp | ATAGTACCTGTTCAACAAGGGTGCTGTGAGAATCTTCTGAAAATTAGGGATATATGCATATCCAGGACATaGGGTTTTGGTTGCCATGGG | + |
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Preference number: 4 (lower is better) Translates to: IVPVQQGCCENLLKIRDICISRT*GFGCHG Trigger: CCCATGGCAACCAAAACCTCATGTCCTGGATATGCA...TATATCCCTAATTTTCAGAAGATTCTCACAGCACCCTTGTTGAACAGGTACTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000434826.3 |
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| CDS-3UTR CCA 90 bp | ACTGTTTATTTGGGCTTTAAGCTGAAGCGTACTCTTGCAAGACATCTGTCCTGGGTAGATGTTGGCTTTTaGTATGATACAGATGCCATG | + |
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Preference number: 4 (lower is better) Translates to: TVYLGFKLKRTLARHLSWVDVGF*YDTDAM Trigger: CATGGCATCTGTATCATACCAAAAGCCAACATCTAC...CCAGGACAGATGTCTTGCAAGAGTACGCTTCAGCTTAAAGCCCAAATAAACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434826.3 |
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| CDS-3UTR CCA 90 bp | GGGGTCAAATCCAAGTTCTGCTACTTCCTAACCATGTACTCTTTCAAAGCCTTAAGGTTTTGGTTGCCATaGGTTTTGATATCTGTGGGT | + |
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Preference number: 4 (lower is better) Translates to: GVKSKFCYFLTMYSFKALRFWLP*VLISVG Trigger: ACCCACAGATATCAAAACCCATGGCAACCAAAACCT...TAAGGCTTTGAAAGAGTACATGGTTAGGAAGTAGCAGAACTTGGATTTGACCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000434826.3 |
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| CDS-3UTR TCA 90 bp | ACTGTTTATTTGGGCTTTAAGCTGAAGCGTACTCTTGCAAGACATCTGTCCTGGATATCTGTGGGTTATTaGATCAAGAGAAGCTTGACT | + |
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Preference number: 4 (lower is better) Translates to: TVYLGFKLKRTLARHLSWISVGY*IKRSLT Trigger: AGTCAAGCTTCTCTTGATTCAATAACCCACAGATAT...CCAGGACAGATGTCTTGCAAGAGTACGCTTCAGCTTAAAGCCCAAATAAACAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434826.3 |
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| CDS-3UTR GCA 90 bp | CAACAAGGGTGCTGTGAGAATCTTCTGAAAATTAGGGATATAACTGCTTTTTACAAGAACGAAAGACTCTaGAGTCTTTCCTCTCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: QQGCCENLLKIRDITAFYKNERL*SLSSPC Trigger: GCAGGGAGAGGAAAGACTGCAGAGTCTTTCGTTCTT...GTAAAAAGCAGTTATATCCCTAATTTTCAGAAGATTCTCACAGCACCCTTGTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000434826.3 |
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| CDS-3UTR TCA 90 bp | AGAAAGATAGTACCTGTTCAACAAGGGTGCTGTGAGAATCTTCTGAAAATTAGGCATTTGGAATTTCTCTaGTCAGTGTCCTCGAAAGCA | + |
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Preference number: 4 (lower is better) Translates to: RKIVPVQQGCCENLLKIRHLEFL*SVSSKA Trigger: TGCTTTCGAGGACACTGATCAGAGAAATTCCAAATG...CCTAATTTTCAGAAGATTCTCACAGCACCCTTGTTGAACAGGTACTATCTTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434826.3 |
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| CDS-3UTR GCA 90 bp | AGAAAGATAGTACCTGTTCAACAAGGGTGCTGTGAGAATCTTCTGAAAATTAGGGTCAAATCCAAGTTCTaGTACTTCCTAACCATGTAC | + |
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Preference number: 4 (lower is better) Translates to: RKIVPVQQGCCENLLKIRVKSKF*YFLTMY Trigger: GTACATGGTTAGGAAGTAGCAGAACTTGGATTTGAC...CCTAATTTTCAGAAGATTCTCACAGCACCCTTGTTGAACAGGTACTATCTTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434826.3 |
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| CDS-3UTR GCA 90 bp | CAACAAGGGTGCTGTGAGAATCTTCTGAAAATTAGGGATATAACTGCTTTTTACCCTGTTCAACAAGGGTaGTGTGAGAATCTTCTGAAA | + |
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Preference number: 4 (lower is better) Translates to: QQGCCENLLKIRDITAFYPVQQG*CENLLK Trigger: TTTCAGAAGATTCTCACAGCACCCTTGTTGAACAGG...GTAAAAAGCAGTTATATCCCTAATTTTCAGAAGATTCTCACAGCACCCTTGTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000434826.3 |
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| CDS-3UTR CCA 90 bp | CAAGGGTGCTGTGAGAATCTTCTGAAAATTAGGGATATAACTGCTTTTTACTGCCCTTATCTGCAAAGCTaGGGAAATAATAGAACCTAT | + |
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Preference number: 4 (lower is better) Translates to: QGCCENLLKIRDITAFYCPYLQS*GNNRTY Trigger: ATAGGTTCTATTATTTCCCCAGCTTTGCAGATAAGG...GCAGTAAAAAGCAGTTATATCCCTAATTTTCAGAAGATTCTCACAGCACCCTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000434826.3 |
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| CDS-3UTR GCA 90 bp | AATTTCCTTATCTGCAAAGCTGGGGAAATAATAGAACCTATCTCCTATGGTTATAATGATGACTTACACTaGCTAACAAGAATAGCCCAT | + |
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Preference number: 4 (lower is better) Translates to: NFLICKAGEIIEPISYGYNDDLH*LTRIAH Trigger: ATGGGCTATTCTTGTTAGGCAGTGTAAGTCATCATT...ATAACCATAGGAGATAGGTTCTATTATTTCCCCAGCTTTGCAGATAAGGAAATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434826.3 |
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| CDS-3UTR CAA 90 bp | AGCCCCATAACCTGGGGTCAAATCCAAGTTCTGCTACTTCCTAACCATGTACTCGGCAGCTTAGGTGGTTaGGAAGCTCTTGGCAATGAT | + |
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Preference number: 5 (lower is better) Translates to: SPITWGQIQVLLLPNHVLGSLGG*EALGND Trigger: ATCATTGCCAAGAGCTTCCAAACCACCTAAGCTGCC...GAGTACATGGTTAGGAAGTAGCAGAACTTGGATTTGACCCCAGGTTATGGGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000434826.3 |
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| CDS-3UTR CAA 90 bp | TATTTGGGCTTTAAGCTGAAGCGTACTCTTGCAAGACATCTGTCCTGGGGCAATGTGGTTTGGAAGCTCTaGGCAATGATGACTTACACT | + |
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Preference number: 5 (lower is better) Translates to: YLGFKLKRTLARHLSWGNVVWKL*AMMTYT Trigger: AGTGTAAGTCATCATTGCCAAGAGCTTCCAAACCAC...ATTGCCCCAGGACAGATGTCTTGCAAGAGTACGCTTCAGCTTAAAGCCCAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434826.3 |
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| CDS TCA 90 bp | GATGACTTACACTGCCTAACAAGAATAGCCCATTTGGAATTTCTCTaGTCAGTGTCCTCGAAAGCACTCATATGCCAGGCAAAAGAAGCG | + |
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Preference number: 5 (lower is better) Translates to: DDLHCLTRIAHLEFL*SVSSKALICQAKEA Trigger: CGCTTCTTTTGCCTGGCATATGAGTGCTTTCGAGGACACTGATCAGAGAAATTCCAAATGGGCTATTCTTGTTAGGCAGTGTAAGTCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000434826.3 ENST00000505647.1 ENST00000508011.1 |
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| CDS-3UTR CAA 90 bp | AAGCTGAAGCGTACTCTTGCAAGACATCTGTCCTGGGGCAATATGAGAAGCACTTTCCAAACTGTTTATTaGGGCTTTAAGCTGAAGCGT | + |
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Preference number: 5 (lower is better) Translates to: KLKRTLARHLSWGNMRSTFQTVY*GFKLKR Trigger: ACGCTTCAGCTTAAAGCCCAAATAAACAGTTTGGAA...AGTGCTTCTCATATTGCCCCAGGACAGATGTCTTGCAAGAGTACGCTTCAGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434826.3 |
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| CDS CCA 90 bp | ACGCCAGATGCTGTTCTCCTACATAGGAGGTGTGCTGATGAATTTTaGGTAAATAATCCTTTATGTAGTCTGGACCTGATTTCCCAGAGT | + |
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Preference number: 5 (lower is better) Translates to: TPDAVLLHRRCADEF*VNNPLCSLDLISQS Trigger: ACTCTGGGAAATCAGGTCCAGACTACATAAAGGATTATTTACCCAAAATTCATCAGCACACCTCCTATGTAGGAGAACAGCATCTGGCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508011.1 |
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| CDS-3UTR CAA 90 bp | AGAAAGATAGTACCTGTTCAACAAGGGTGCTGTGAGAATCTTCTGAAAATTAGGCCAGGACATGAGGTTTaGGTTGCCATGGGTTTTGAT | + |
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Preference number: 5 (lower is better) Translates to: RKIVPVQQGCCENLLKIRPGHEV*VAMGFD Trigger: ATCAAAACCCATGGCAACCAAAACCTCATGTCCTGG...CCTAATTTTCAGAAGATTCTCACAGCACCCTTGTTGAACAGGTACTATCTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000434826.3 |
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| CDS-3UTR CAA 90 bp | AATTTCCTTATCTGCAAAGCTGGGGAAATAATAGAACCTATCTCCTATGGTTATCTGGCAAGCTTCTATTaGAGGCAGGCCTCCATAAAT | + |
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Preference number: 5 (lower is better) Translates to: NFLICKAGEIIEPISYGYLASFY*RQASIN Trigger: ATTTATGGAGGCCTGCCTCAAATAGAAGCTTGCCAG...ATAACCATAGGAGATAGGTTCTATTATTTCCCCAGCTTTGCAGATAAGGAAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434826.3 |
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| CDS-3UTR CAA 90 bp | AGAAAGATAGTACCTGTTCAACAAGGGTGCTGTGAGAATCTTCTGAAAATTAGGGATATCTGTGGGTTATaGAATCAAGAGAAGCTTGAC | + |
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Preference number: 5 (lower is better) Translates to: RKIVPVQQGCCENLLKIRDICGL*NQEKLD Trigger: GTCAAGCTTCTCTTGATTCAATAACCCACAGATATC...CCTAATTTTCAGAAGATTCTCACAGCACCCTTGTTGAACAGGTACTATCTTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434826.3 |
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| CDS CCA 72 bp | TTTCCCAGAGTCATGGGAACAGAGAGGAAGATCACTTaGCCGGGGCTGGGACGGAAGCTGAGGGCTGATGAT | + |
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Preference number: 6 (lower is better) Translates to: FPRVMGTERKIT*PGLGRKLRADD Trigger: ATCATCAGCCCTCAGCTTCCGTCCCAGCCCCGGCCAAGTGATCTTCCTCTCTGTTCCCATGACTCTGGGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508011.1 |
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| CDS TCA 72 bp | CACTGCCTAACAAGAATAGCCCATTTGGAATTTCTCTaGTCAGTGTCCTCGAAAGCACTCATATGCCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: HCLTRIAHLEFL*SVSSKALICQA Trigger: TGCCTGGCATATGAGTGCTTTCGAGGACACTGATCAGAGAAATTCCAAATGGGCTATTCTTGTTAGGCAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000434826.3 ENST00000505647.1 ENST00000508011.1 |
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| CDS GCA 72 bp | GGATTTTCTTCTTCGGCTTCTTCAAATCAGTTAAGCTaGACCAGAAAGAACGAAAGACTCTGCAGTCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: GFSSSASSNQLS*TRKNERLCSLS Trigger: GGAAAGACTGCAGAGTCTTTCGTTCTTTCTGGTGCAGCTTAACTGATTTGAAGAAGCCGAAGAAGAAAATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434826.3 |
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| CDS CCA 72 bp | ATCATTTGTTTTCCCACAGTAGTAGATGTTGGCTTTTaGTATGATACAGATGCCATGGCTAAAGTCTTAACC | + |
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Preference number: 6 (lower is better) Translates to: IICFPTVVDVGF*YDTDAMAKVLT Trigger: GGTTAAGACTTTAGCCATGGCATCTGTATCATACCAAAAGCCAACATCTACTACTGTGGGAAAACAAATGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000434826.3 |
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| CDS CAA 72 bp | GTTTTGGTTGCCATGGGTTTTGATATCTGTGGGTTATaGAATCAAGAGAAGCTTGACTTAGTTCTTCATACT | + |
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Preference number: 6 (lower is better) Translates to: VLVAMGFDICGL*NQEKLDLVLHT Trigger: AGTATGAAGAACTAAGTCAAGCTTCTCTTGATTCAATAACCCACAGATATCAAAACCCATGGCAACCAAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000434826.3 |
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