RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C17ORF107 (Homo sapiens)

Ensembl gene IDs: ENSG00000205710

Ensembl transcript IDs: ENST00000381365.4, ENST00000521575.1

Found 296 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCCTGCGGCTTGGGCTACCCGGCTCAGCGCTGCACCCGGATCCCTaGCGTCTGGGGCTGGGCCCGCGCTGCCGTCTAGTCGCCGCGCCT +
Preference number: 1 (lower is better)
Translates to: ALRLGLPGSALHPDP*RLGLGPRCRLVAAP
Trigger: AGGCGCGGCGACTAGACGGCAGCGCGGGCCCAGCCCCAGACGGCAGGGATCCGGGTGCAGCGCTGAGCCGGGTAGCCCAAGCCGCAGGGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521575.1
3UTR GCA 90 bp CCGTGCCCCCGTCCCGCAGAGAACGGCGAGTGGGCCATCGACTTCTaGCCGGGGGTGATCCGCCGCCACCACGGTGGCGCCACCGACGGC +
Preference number: 1 (lower is better)
Translates to: PCPRPAENGEWAIDF*PGVIRRHHGGATDG
Trigger: GCCGTCGGTGGCGCCACCGTGGTGGCGGCGGATCACCCCCGGGCAGAAGTCGATGGCCCACTCGCCGTTCTCTGCGGGACGGGGGCACGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR GCA 90 bp TTGCCGAACCCCCTGCCCTGCGGCTTGGGCTACCCGGCTCAGCGCTaGACCCGGATCCCTGCCGTCTGGGGCTGGGCCCGCGCTGCCGTC +
Preference number: 1 (lower is better)
Translates to: LPNPLPCGLGYPAQR*TRIPAVWGWARAAV
Trigger: GACGGCAGCGCGGGCCCAGCCCCAGACGGCAGGGATCCGGGTGCAGCGCTGAGCCGGGTAGCCCAAGCCGCAGGGCAGGGGGTTCGGCAA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521575.1
3UTR TCA 90 bp GTCCCGCAGAGAACGGCGAGTGGGCCATCGACTTCTGCCCGGGGGTaGTCCGCCGCCACCACGGTGGCGCCACCGACGGCCCAGGGGAGA +
Preference number: 1 (lower is better)
Translates to: VPQRTASGPSTSARG*SAATTVAPPTAQGR
Trigger: TCTCCCCTGGGCCGTCGGTGGCGCCACCGTGGTGGCGGCGGATCACCCCCGGGCAGAAGTCGATGGCCCACTCGCCGTTCTCTGCGGGAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR CCA 90 bp GGGCGGGGCTTCGCGCTGGAGGCGGAGCCAGGCGTAGGCACTGGGTaGGACGCTCCAGCGCGGCCGGAGGTACAGATGGGAACAGAGGCG +
Preference number: 1 (lower is better)
Translates to: GRGFALEAEPGVGTG*DAPARPEVQMGTEA
Trigger: CGCCTCTGTTCCCATCTGTACCTCCGGCCGCGCTGGAGCGTCCCACCCAGTGCCTACGCCTGGCTCCGCCTCCAGCGCGAAGCCCCGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR CCA 90 bp CCCCCAAACCCGGGCTCGCTCCCGGGAGGCGGGGCCCGCTCTCACTaGCTCTCCCTCCAGCCGGCGGCCAGAAATGCACGGTCTCCATCA +
Preference number: 1 (lower is better)
Translates to: PPNPGSLPGGGARSH*LSLQPAARNARSPS
Trigger: TGATGGAGACCGTGCATTTCTGGCCGCCGGCTGGAGGGAGAGCCAGTGAGAGCGGGCCCCGCCTCCCGGGAGCGAGCCCGGGTTTGGGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR CCA 90 bp CTCGGGGCGGGGCTTCGCGCTGGAGGCGGAGCCAGGCGTAGGCACTaGGTGGGACGCTCCAGCGCGGCCGGAGGTACAGATGGGAACAGA +
Preference number: 1 (lower is better)
Translates to: LGAGLRAGGGARRRH*VGRSSAAGGTDGNR
Trigger: TCTGTTCCCATCTGTACCTCCGGCCGCGCTGGAGCGTCCCACCCAGTGCCTACGCCTGGCTCCGCCTCCAGCGCGAAGCCCCGCCCCGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR CCA 90 bp CGCGGCCGGAGGTACAGATGGGAACAGAGGCGTGCGGGCTGGGCTTaGGTGAAGGGGTGGGCTTGGGATCGCGGCCCCGCTAGATCCCAG +
Preference number: 1 (lower is better)
Translates to: RGRRYRWEQRRAGWA*VKGWAWDRGPARSQ
Trigger: CTGGGATCTAGCGGGGCCGCGATCCCAAGCCCACCCCTTCACCCAAGCCCAGCCCGCACGCCTCTGTTCCCATCTGTACCTCCGGCCGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR CCA 90 bp CTCCAGCGCGGCCGGAGGTACAGATGGGAACAGAGGCGTGCGGGCTaGGCTTGGGTGAAGGGGTGGGCTTGGGATCGCGGCCCCGCTAGA +
Preference number: 1 (lower is better)
Translates to: LQRGRRYRWEQRRAG*AWVKGWAWDRGPAR
Trigger: TCTAGCGGGGCCGCGATCCCAAGCCCACCCCTTCACCCAAGCCCAGCCCGCACGCCTCTGTTCCCATCTGTACCTCCGGCCGCGCTGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR TCA 90 bp GAGTGGCCTACGACGCCAACGTGCTCGTCTACGAGGGCGGCTCCGTaGCGTGGCTGCCTCCGGCCATCTACCGCAGCGTCTGCGCAGTGG +
Preference number: 1 (lower is better)
Translates to: EWPTTPTCSSTRAAP*RGCLRPSTAASAQW
Trigger: CCACTGCGCAGACGCTGCGGTAGATGGCCGGAGGCAGCCACGTCACGGAGCCGCCCTCGTAGACGAGCACGTTGGCGTCGTAGGCCACTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR CCA 90 bp GCTCTGGCTGTCTCGCCCCGCCCTGGGCTTTATTCGGACGCTGGGTaGGGCTGGTACGGGGATGGAGTCCCTGGTCCGCCGTCCTCCTCA +
Preference number: 1 (lower is better)
Translates to: ALAVSPRPGLYSDAG*GWYGDGVPGPPSSS
Trigger: TGAGGAGGACGGCGGACCAGGGACTCCATCCCCGTACCAGCCCCACCCAGCGTCCGAATAAAGCCCAGGGCGGGGCGAGACAGCCAGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
3UTR CCA 90 bp GCCTACGACGCCAACGTGCTCGTCTACGAGGGCGGCTCCGTGACGTaGCTGCCTCCGGCCATCTACCGCAGCGTCTGCGCAGTGGAGGTC +
Preference number: 1 (lower is better)
Translates to: AYDANVLVYEGGSVT*LPPAIYRSVCAVEV
Trigger: GACCTCCACTGCGCAGACGCTGCGGTAGATGGCCGGAGGCAGCCACGTCACGGAGCCGCCCTCGTAGACGAGCACGTTGGCGTCGTAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR TCA 90 bp GCCGGAGGTACAGATGGGAACAGAGGCGTGCGGGCTGGGCTTGGGTaGAGGGGTGGGCTTGGGATCGCGGCCCCGCTAGATCCCAGCTTC +
Preference number: 1 (lower is better)
Translates to: AGGTDGNRGVRAGLG*RGGLGIAAPLDPSF
Trigger: GAAGCTGGGATCTAGCGGGGCCGCGATCCCAAGCCCACCCCTTCACCCAAGCCCAGCCCGCACGCCTCTGTTCCCATCTGTACCTCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR GCA 90 bp GGGGCTGGTACGGGGATGGAGTCCCTGGTCCGCCGTCCTCCTCACTaGTGCTGGACGTCACCTGGAGGTCTCCCGAGTAGCTCTCTTGGG +
Preference number: 1 (lower is better)
Translates to: GAGTGMESLVRRPPH*CWTSPGGLPSSSLG
Trigger: CCCAAGAGAGCTACTCGGGAGACCTCCAGGTGACGTCCAGCAGCAGTGAGGAGGACGGCGGACCAGGGACTCCATCCCCGTACCAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
3UTR GCA 90 bp CGGGGCCCGCTCTCACTGGCTCTCCCTCCAGCCGGCGGCCAGAAATaGACGGTCTCCATCAACGTCCTGCTCGCCCAGACCGTCTTCTTG +
Preference number: 1 (lower is better)
Translates to: RGPLSLALPPAGGQK*TVSINVLLAQTVFL
Trigger: CAAGAAGACGGTCTGGGCGAGCAGGACGTTGATGGAGACCGTGCATTTCTGGCCGCCGGCTGGAGGGAGAGCCAGTGAGAGCGGGCCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR CCA 90 bp TACAGATGGGAACAGAGGCGTGCGGGCTGGGCTTGGGTGAAGGGGTaGGCTTGGGATCGCGGCCCCGCTAGATCCCAGCTTCCAGGGCTG +
Preference number: 1 (lower is better)
Translates to: YRWEQRRAGWAWVKG*AWDRGPARSQLPGL
Trigger: CAGCCCTGGAAGCTGGGATCTAGCGGGGCCGCGATCCCAAGCCCACCCCTTCACCCAAGCCCAGCCCGCACGCCTCTGTTCCCATCTGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR GCA 90 bp GCTGGTACGGGGATGGAGTCCCTGGTCCGCCGTCCTCCTCACTGCTaGTGGACGTCACCTGGAGGTCTCCCGAGTAGCTCTCTTGGGGGA +
Preference number: 1 (lower is better)
Translates to: AGTGMESLVRRPPHC*WTSPGGLPSSSLGG
Trigger: TCCCCCAAGAGAGCTACTCGGGAGACCTCCAGGTGACGTCCAGCAGCAGTGAGGAGGACGGCGGACCAGGGACTCCATCCCCGTACCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
3UTR CCA 90 bp GGTACGGGGATGGAGTCCCTGGTCCGCCGTCCTCCTCACTGCTGCTaGACGTCACCTGGAGGTCTCCCGAGTAGCTCTCTTGGGGGACAG +
Preference number: 1 (lower is better)
Translates to: GTGMESLVRRPPHCC*TSPGGLPSSSLGGQ
Trigger: CTGTCCCCCAAGAGAGCTACTCGGGAGACCTCCAGGTGACGTCCAGCAGCAGTGAGGAGGACGGCGGACCAGGGACTCCATCCCCGTACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
3UTR CCA 90 bp GCTTTATTCGGACGCTGGGTGGGGCTGGTACGGGGATGGAGTCCCTaGTCCGCCGTCCTCCTCACTGCTGCTGGACGTCACCTGGAGGTC +
Preference number: 1 (lower is better)
Translates to: ALFGRWVGLVRGWSP*SAVLLTAAGRHLEV
Trigger: GACCTCCAGGTGACGTCCAGCAGCAGTGAGGAGGACGGCGGACCAGGGACTCCATCCCCGTACCAGCCCCACCCAGCGTCCGAATAAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
3UTR TCA 90 bp CCGTCTTCTTGTTCCTCATTGCCCAGAAAATCCCAGAGACTTCTCTaGGCGTGCCGCTCCTGGGCAGGTGAAGCCGGAGCCCCCGCGGGG +
Preference number: 1 (lower is better)
Translates to: PSSCSSLPRKSQRLL*ACRSWAGEAGAPAG
Trigger: CCCCGCGGGGGCTCCGGCTTCACCTGCCCAGGAGCGGCACGCTCAGAGAAGTCTCTGGGATTTTCTGGGCAATGAGGAACAAGAAGACGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR GCA 90 bp AGGCCTAGCTGCTGTTGCGACTGTCGCAGGAATGAGGCAGACCCCTaGAGACCCCGTCCACACAGGCATAGCCATGCTCCCTGGACTAGG +
Preference number: 1 (lower is better)
Translates to: RPSCCCDCRRNEADP*RPRPHRHSHAPWTR
Trigger: CCTAGTCCAGGGAGCATGGCTATGCCTGTGTGGACGGGGTCTGCAGGGGTCTGCCTCATTCCTGCGACAGTCGCAACAGCAGCTAGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521575.1
3UTR TCA 90 bp AGAATGCCCTTTTCTGTCCGTAATTGCCCCCATCCTGACGGCCCATaGCCCTGGTGCAGACAGCCGCAGCCTCCTCTTCAGCCCGCTGTC +
Preference number: 1 (lower is better)
Translates to: RMPFSVRNCPHPDGP*PWCRQPQPPLQPAV
Trigger: GACAGCGGGCTGAAGAGGAGGCTGCGGCTGTCTGCACCAGGGTCATGGGCCGTCAGGATGGGGGCAATTACGGACAGAAAAGGGCATTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR GCA 90 bp TCCCTCCAGCCGGCGGCCAGAAATGCACGGTCTCCATCAACGTCCTaGTCGCCCAGACCGTCTTCTTGTTCCTCATTGCCCAGAAAATCC +
Preference number: 1 (lower is better)
Translates to: SLQPAARNARSPSTS*SPRPSSCSSLPRKS
Trigger: GGATTTTCTGGGCAATGAGGAACAAGAAGACGGTCTGGGCGAGCAGGACGTTGATGGAGACCGTGCATTTCTGGCCGCCGGCTGGAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR TCA 90 bp GTGCAGACCTGTGCAAAAAGCTCGGTTTCCCCGAGCCCACAGTATTaGTGGCCAGTTCGGAGTGGCCTACGACGCCAACGTGCTCGTCTA +
Preference number: 1 (lower is better)
Translates to: VQTCAKSSVSPSPQY*WPVRSGLRRQRARL
Trigger: TAGACGAGCACGTTGGCGTCGTAGGCCACTCCGAACTGGCCATCAATACTGTGGGCTCGGGGAAACCGAGCTTTTTGCACAGGTCTGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR GCA 90 bp CTCCATCAACGTCCTGCTCGCCCAGACCGTCTTCTTGTTCCTCATTaGCCAGAAAATCCCAGAGACTTCTCTGAGCGTGCCGCTCCTGGG +
Preference number: 1 (lower is better)
Translates to: LHQRPARPDRLLVPH*PENPRDFSERAAPG
Trigger: CCCAGGAGCGGCACGCTCAGAGAAGTCTCTGGGATTTTCTGGGCAATGAGGAACAAGAAGACGGTCTGGGCGAGCAGGACGTTGATGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR TCA 90 bp GGGACTTCCACGGTGGGCTTGCCCCGGACCAACGACACTGGAGGATaGCTTCCACAACTGGGTTTAGCTTACCCCTGTCCTGAAATCATT +
Preference number: 1 (lower is better)
Translates to: GTSTVGLPRTNDTGG*LPQLGLAYPCPEII
Trigger: AATGATTTCAGGACAGGGGTAAGCTAAACCCAGTTGTGGAAGTCATCCTCCAGTGTCGTTGGTCCGGGGCAAGCCCACCGTGGAAGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR GCA 90 bp TTTATCACCATCTCTTCAACAACTATGACCCAGGAAGCCGGCCAGTaGGGGAGCCTGAGGATACTGTCACCATCAGCCTCAAGGTCACCC +
Preference number: 1 (lower is better)
Translates to: FITISSTTMTQEAGQ*GSLRILSPSASRSP
Trigger: GGGTGACCTTGAGGCTGATGGTGACAGTATCCTCAGGCTCCCGCACTGGCCGGCTTCCTGGGTCATAGTTGTTGAAGAGATGGTGATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR GCA 90 bp GTTACTCTAGTCCTGCCTTCTGGCTTTCCATACCCTCAACGAGAATaGCCTTTTCTGTCCGTAATTGCCCCCATCCTGACGGCCCATGAC +
Preference number: 1 (lower is better)
Translates to: VTLVLPSGFPYPQRE*PFLSVIAPILTAHD
Trigger: GTCATGGGCCGTCAGGATGGGGGCAATTACGGACAGAAAAGGGCATTCTCGTTGAGGGTATGGAAAGCCAGAAGGCAGGACTAGAGTAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR GCA 90 bp CCGCAGCTCTCAGACGTACAATGCCGAAGAGGTGGAGTTCACTTTTaGCGTAGACAACGACGGCAAGACCATCAACAAGATCGACATCGA +
Preference number: 1 (lower is better)
Translates to: PQLSDVQCRRGGVHF*RRQRRQDHQQDRHR
Trigger: TCGATGTCGATCTTGTTGATGGTCTTGCCGTCGTTGTCTACGGCAAAAGTGAACTCCACCTCTTCGGCATTGTACGTCTGAGAGCTGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR TCA 90 bp ATGAAAAAGAGGAGACTCTCACCACTAGCGTCTGGATTGGAATCGTaGGTCAAATCTGGGGAATGGTGTGAGGTCTTGTCCAGGGCACCC +
Preference number: 1 (lower is better)
Translates to: MKKRRLSPLASGLES*VKSGEWCEVLSRAP
Trigger: GGGTGCCCTGGACAAGACCTCACACCATTCCCCAGATTTGACTCACGATTCCAATCCAGACGCTAGTGGTGAGAGTCTCCTCTTTTTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR CCA 90 bp TTAGGATTGGCAGGATTACCGACTCAACTACAGCAAGGACGACTTTaGGGGTATAGAAACCCTGCGAGTCCCTTCAGAACTCGTGTGGCT +
Preference number: 1 (lower is better)
Translates to: LGLAGLPTQLQQGRL*GYRNPASPFRTRVA
Trigger: AGCCACACGAGTTCTGAAGGGACTCGCAGGGTTTCTATACCCCCAAAGTCGTCCTTGCTGTAGTTGAGTCGGTAATCCTGCCAATCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR-3UTR GCA 90 bp GGACGCTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGGTCCGCCGTCCTCCTCCCGAACCCCCTGCCCTaGGGCTTGGGCTACCCGGCT +
Preference number: 2 (lower is better)
Translates to: GRWVGLVRGWSPWSAVLLPNPLP*GLGYPA
Trigger: AGCCGGGTAGCCCAAGCCGCAGGGCAGGGGGTTCGG...GAGGAGGACGGCGGACCAGGGACTCCATCCCCGTACCAGCCCCACCCAGCGTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521575.1
3UTR-3UTR CCA 90 bp GCGGAGCCAGGCGTAGGCACTGGGTGGGACGCTCCAGCGCGGCCGGAGGTACAGTCAGAGCTTCTGGGGTaGGCTCCCGGCCCTGGCTCC +
Preference number: 2 (lower is better)
Translates to: AEPGVGTGWDAPARPEVQSELLG*APGPGS
Trigger: GGAGCCAGGGCCGGGAGCCCACCCCAGAAGCTCTGA...CTGTACCTCCGGCCGCGCTGGAGCGTCCCACCCAGTGCCTACGCCTGGCTCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR-3UTR GCA 90 bp GTAGCTCTCTTGGGGGACAGTCCGGCTCAGTGCCTCCCTAGCCCCGCCGCCTCTGACAGTCCGGCTCAGTaGCTCCCTAGCCCCGCCGCC +
Preference number: 2 (lower is better)
Translates to: VALLGDSPAQCLPSPAASDSPAQ*LPSPAA
Trigger: GGCGGCGGGGCTAGGGAGGCACTGAGCCGGACTGTC...AGAGGCGGCGGGGCTAGGGAGGCACTGAGCCGGACTGTCCCCCAAGAGAGCTAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
3UTR-3UTR GCA 90 bp GACGCTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGGTCCGCCGTCCTCCTCAAGTCGCCGCGCCTCCTaGTGCAGCCACAGGGCTGAG +
Preference number: 2 (lower is better)
Translates to: DAGWGWYGDGVPGPPSSSSRRAS*CSHRAE
Trigger: CTCAGCCCTGTGGCTGCAGCAGGAGGCGCGGCGACT...TGAGGAGGACGGCGGACCAGGGACTCCATCCCCGTACCAGCCCCACCCAGCGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521575.1
3UTR-3UTR TCA 90 bp GACGCTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGGTCCGCCGTCCTCCTCAACTCACCCCGTGTCCTaGGCTCACCGGTTCTCCGGG +
Preference number: 2 (lower is better)
Translates to: DAGWGWYGDGVPGPPSSSTHPVS*AHRFSG
Trigger: CCCGGAGAACCGGTGAGCTCAGGACACGGGGTGAGT...TGAGGAGGACGGCGGACCAGGGACTCCATCCCCGTACCAGCCCCACCCAGCGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521575.1
3UTR-3UTR CCA 90 bp GGACGCTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGGTCCGCCGTCCTCCTCTGTCTCGCCCCGCCCTaGGCTTTATTCGGACGCTGG +
Preference number: 2 (lower is better)
Translates to: GRWVGLVRGWSPWSAVLLCLAPP*ALFGRW
Trigger: CCAGCGTCCGAATAAAGCCCAGGGCGGGGCGAGACA...GAGGAGGACGGCGGACCAGGGACTCCATCCCCGTACCAGCCCCACCCAGCGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
3UTR-3UTR GCA 90 bp TTTATTCGGACGCTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGGTCCGCCGTGACAGTCCGGCTCAGTaGCTCCCTAGCCCCGCCGCC +
Preference number: 2 (lower is better)
Translates to: FIRTLGGAGTGMESLVRRDSPAQ*LPSPAA
Trigger: GGCGGCGGGGCTAGGGAGGCACTGAGCCGGACTGTC...ACGGCGGACCAGGGACTCCATCCCCGTACCAGCCCCACCCAGCGTCCGAATAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
3UTR-3UTR GCA 90 bp GAACAGAGGCGTGCGGGCTGGGCTTGGGTGAAGGGGTGGGCTTGGGATCGCGGCCGCCGTCCTCCTCACTaGTGCTGGACGTCACCTGGA +
Preference number: 2 (lower is better)
Translates to: EQRRAGWAWVKGWAWDRGRRPPH*CWTSPG
Trigger: TCCAGGTGACGTCCAGCAGCAGTGAGGAGGACGGCG...GCCGCGATCCCAAGCCCACCCCTTCACCCAAGCCCAGCCCGCACGCCTCTGTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR-3UTR GCA 90 bp TCTGGCTGTCTCGCCCCGCCCTGGGCTTTATTCGGACGCTGGGTGGGGCTGGTAGCTTGCCGAACCCCCTaGCCTGCGGCTTGGGCTACC +
Preference number: 2 (lower is better)
Translates to: SGCLAPPWALFGRWVGLVACRTP*PAAWAT
Trigger: GGTAGCCCAAGCCGCAGGGCAGGGGGTTCGGCAAGC...TACCAGCCCCACCCAGCGTCCGAATAAAGCCCAGGGCGGGGCGAGACAGCCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521575.1
3UTR-3UTR GCA 90 bp TTTATTCGGACGCTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGGTCCGCCGTACCGCAGCCCCAGCTTaGCGAACCCCCTGCCCTGCG +
Preference number: 2 (lower is better)
Translates to: FIRTLGGAGTGMESLVRRTAAPA*RTPCPA
Trigger: CGCAGGGCAGGGGGTTCGGCAAGCTGGGGCTGCGGT...ACGGCGGACCAGGGACTCCATCCCCGTACCAGCCCCACCCAGCGTCCGAATAAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000521575.1
3UTR-3UTR CCA 90 bp CTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGGTCCGCCGTCCTCCTCACTGCGGCCAGTGTGAAGGGTaGGGGCGTGGCCAAAACCCA +
Preference number: 2 (lower is better)
Translates to: LGGAGTGMESLVRRPPHCGQCEG*GRGQNP
Trigger: TGGGTTTTGGCCACGCCCCCACCCTTCACACTGGCC...GCAGTGAGGAGGACGGCGGACCAGGGACTCCATCCCCGTACCAGCCCCACCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
3UTR-3UTR CCA 90 bp AAAAGCTCTGGCTGTCTCGCCCCGCCCTGGGCTTTATTCGGACGCTGGGTGGGGCCCTGCCCTGCGGCTTaGGCTACCCGGCTCAGCGCT +
Preference number: 2 (lower is better)
Translates to: KSSGCLAPPWALFGRWVGPCPAA*ATRLSA
Trigger: AGCGCTGAGCCGGGTAGCCCAAGCCGCAGGGCAGGG...CCCCACCCAGCGTCCGAATAAAGCCCAGGGCGGGGCGAGACAGCCAGAGCTTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521575.1
3UTR CAA 90 bp CTCACTGCTGCTGGACGTCACCTGGAGGTCTCCCGAGTAGCTCTCTaGGGGGACAGTCCGGCTCAGTGCCTCCCTAGCCCCGCCGCCTCT +
Preference number: 2 (lower is better)
Translates to: LTAAGRHLEVSRVAL*GDSPAQCLPSPAAS
Trigger: AGAGGCGGCGGGGCTAGGGAGGCACTGAGCCGGACTGTCCCCCAAGAGAGCTACTCGGGAGACCTCCAGGTGACGTCCAGCAGCAGTGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
3UTR-3UTR GCA 90 bp GCTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGGTCCGCCGTCCTCCTCACTGGCCGGCGGCCAGAAATaGACGGTCTCCATCAACGTC +
Preference number: 2 (lower is better)
Translates to: AGWGWYGDGVPGPPSSSLAGGQK*TVSINV
Trigger: GACGTTGATGGAGACCGTGCATTTCTGGCCGCCGGC...CAGTGAGGAGGACGGCGGACCAGGGACTCCATCCCCGTACCAGCCCCACCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR-3UTR GCA 90 bp ATGGCCAGTTCGGAGTGGCCTACGACGCCAACGTGCTCGTCTACGAGGGCGGCTTGGGCCATCGACTTCTaGCCGGGGGTGATCCGCCGC +
Preference number: 2 (lower is better)
Translates to: MASSEWPTTPTCSSTRAAWAIDF*PGVIRR
Trigger: GCGGCGGATCACCCCCGGGCAGAAGTCGATGGCCCA...AGCCGCCCTCGTAGACGAGCACGTTGGCGTCGTAGGCCACTCCGAACTGGCCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR-3UTR CCA 90 bp GACGCTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGGTCCGCCGTCCTCCTCACCTCCTCACTGCTGCTaGACGTCACCTGGAGGTCTC +
Preference number: 2 (lower is better)
Translates to: DAGWGWYGDGVPGPPSSSPPHCC*TSPGGL
Trigger: GAGACCTCCAGGTGACGTCCAGCAGCAGTGAGGAGG...TGAGGAGGACGGCGGACCAGGGACTCCATCCCCGTACCAGCCCCACCCAGCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
3UTR-3UTR CCA 90 bp CGCCCTGGGCTTTATTCGGACGCTGGGTGGGGCTGGTACGGGGATGGAGTCCCTCGGGGATGGAGTCCCTaGTCCGCCGTCCTCCTCACT +
Preference number: 2 (lower is better)
Translates to: RPGLYSDAGWGWYGDGVPRGWSP*SAVLLT
Trigger: AGTGAGGAGGACGGCGGACCAGGGACTCCATCCCCG...AGGGACTCCATCCCCGTACCAGCCCCACCCAGCGTCCGAATAAAGCCCAGGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
3UTR-3UTR CCA 90 bp AAAAGCTCTGGCTGTCTCGCCCCGCCCTGGGCTTTATTCGGACGCTGGGTGGGGGGGCTGGTACGGGGATaGAGTCCCTGGTCCGCCGTC +
Preference number: 2 (lower is better)
Translates to: KSSGCLAPPWALFGRWVGGLVRG*SPWSAV
Trigger: GACGGCGGACCAGGGACTCCATCCCCGTACCAGCCC...CCCCACCCAGCGTCCGAATAAAGCCCAGGGCGGGGCGAGACAGCCAGAGCTTTT
67% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
3UTR-3UTR CCA 90 bp CCCTGGGCTTTATTCGGACGCTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGGGACGCTGGGTGGGGCTaGTACGGGGATGGAGTCCCT +
Preference number: 2 (lower is better)
Translates to: PWALFGRWVGLVRGWSPWDAGWG*YGDGVP
Trigger: AGGGACTCCATCCCCGTACCAGCCCCACCCAGCGTC...CCAGGGACTCCATCCCCGTACCAGCCCCACCCAGCGTCCGAATAAAGCCCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
3UTR-3UTR GCA 90 bp CAGACCCCTGCAGACCCCGTCCACACAGGCATAGCCATGCTCCCTGGACTAGGATACCCGGCTCAGCGCTaGACCCGGATCCCTGCCGTC +
Preference number: 2 (lower is better)
Translates to: QTPADPVHTGIAMLPGLGYPAQR*TRIPAV
Trigger: GACGGCAGGGATCCGGGTGCAGCGCTGAGCCGGGTA...TCCTAGTCCAGGGAGCATGGCTATGCCTGTGTGGACGGGGTCTGCAGGGGTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521575.1
3UTR-3UTR CCA 90 bp CTGGAGGTCTCCCGAGTAGCTCTCTTGGGGGACAGTCCGGCTCAGTGCCTCCCTGACGCTGGGTGGGGCTaGTACGGGGATGGAGTCCCT +
Preference number: 2 (lower is better)
Translates to: LEVSRVALLGDSPAQCLPDAGWG*YGDGVP
Trigger: AGGGACTCCATCCCCGTACCAGCCCCACCCAGCGTC...AGGGAGGCACTGAGCCGGACTGTCCCCCAAGAGAGCTACTCGGGAGACCTCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
3UTR-3UTR CCA 90 bp GCCCTGGGCTTTATTCGGACGCTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGTGTCTCGCCCCGCCCTaGGCTTTATTCGGACGCTGG +
Preference number: 2 (lower is better)
Translates to: ALGFIRTLGGAGTGMESLCLAPP*ALFGRW
Trigger: CCAGCGTCCGAATAAAGCCCAGGGCGGGGCGAGACA...CAGGGACTCCATCCCCGTACCAGCCCCACCCAGCGTCCGAATAAAGCCCAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
3UTR-3UTR CCA 90 bp CCCTGGGCTTTATTCGGACGCTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGGGGCCAGTGTGAAGGGTaGGGGCGTGGCCAAAACCCA +
Preference number: 2 (lower is better)
Translates to: PWALFGRWVGLVRGWSPWGQCEG*GRGQNP
Trigger: TGGGTTTTGGCCACGCCCCCACCCTTCACACTGGCC...CCAGGGACTCCATCCCCGTACCAGCCCCACCCAGCGTCCGAATAAAGCCCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
3UTR-3UTR CCA 90 bp AAAGCTCTGGCTGTCTCGCCCCGCCCTGGGCTTTATTCGGACGCTGGGTGGGGCCCTCCTCACTGCTGCTaGACGTCACCTGGAGGTCTC +
Preference number: 2 (lower is better)
Translates to: KALAVSPRPGLYSDAGWGPPHCC*TSPGGL
Trigger: GAGACCTCCAGGTGACGTCCAGCAGCAGTGAGGAGG...GCCCCACCCAGCGTCCGAATAAAGCCCAGGGCGGGGCGAGACAGCCAGAGCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
3UTR-3UTR CCA 90 bp CCCTGGGCTTTATTCGGACGCTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGGTATTCGGACGCTGGGTaGGGCTGGTACGGGGATGGA +
Preference number: 2 (lower is better)
Translates to: PWALFGRWVGLVRGWSPWYSDAG*GWYGDG
Trigger: TCCATCCCCGTACCAGCCCCACCCAGCGTCCGAATA...CCAGGGACTCCATCCCCGTACCAGCCCCACCCAGCGTCCGAATAAAGCCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
3UTR-3UTR TCA 90 bp TCACCTGGAGGTCTCCCGAGTAGCTCTCTTGGGGGACAGTCCGGCTCAGTGCCTCGACTGTCGCAGGAATaGGGCAGACCCCTGCAGACC +
Preference number: 2 (lower is better)
Translates to: SPGGLPSSSLGGQSGSVPRLSQE*GRPLQT
Trigger: GGTCTGCAGGGGTCTGCCTCATTCCTGCGACAGTCG...AGGCACTGAGCCGGACTGTCCCCCAAGAGAGCTACTCGGGAGACCTCCAGGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521575.1
3UTR-3UTR GCA 90 bp AAAAGCTCTGGCTGTCTCGCCCCGCCCTGGGCTTTATTCGGACGCTGGGTGGGGCGTCCTCCTCACTGCTaGTGGACGTCACCTGGAGGT +
Preference number: 2 (lower is better)
Translates to: KSSGCLAPPWALFGRWVGRPPHC*WTSPGG
Trigger: ACCTCCAGGTGACGTCCAGCAGCAGTGAGGAGGACG...CCCCACCCAGCGTCCGAATAAAGCCCAGGGCGGGGCGAGACAGCCAGAGCTTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
3UTR-3UTR GCA 90 bp TTTATTCGGACGCTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGGTCCGCCGTAATGAGGCAGACCCCTaGAGACCCCGTCCACACAGG +
Preference number: 2 (lower is better)
Translates to: FIRTLGGAGTGMESLVRRNEADP*RPRPHR
Trigger: CCTGTGTGGACGGGGTCTGCAGGGGTCTGCCTCATT...ACGGCGGACCAGGGACTCCATCCCCGTACCAGCCCCACCCAGCGTCCGAATAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000521575.1
3UTR-3UTR GCA 90 bp CCCTGGGCTTTATTCGGACGCTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGGATTCCGAGGCCTAGCTaGTGTTGCGACTGTCGCAGG +
Preference number: 2 (lower is better)
Translates to: PWALFGRWVGLVRGWSPWIPRPS*CCDCRR
Trigger: CCTGCGACAGTCGCAACAGCAGCTAGGCCTCGGAAT...CCAGGGACTCCATCCCCGTACCAGCCCCACCCAGCGTCCGAATAAAGCCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521575.1
3UTR-3UTR GCA 90 bp GCGGAGCCAGGCGTAGGCACTGGGTGGGACGCTCCAGCGCGGCCGGAGGTACAGCTTCTTGTTCCTCATTaGCCAGAAAATCCCAGAGAC +
Preference number: 2 (lower is better)
Translates to: AEPGVGTGWDAPARPEVQLLVPH*PENPRD
Trigger: GTCTCTGGGATTTTCTGGGCAATGAGGAACAAGAAG...CTGTACCTCCGGCCGCGCTGGAGCGTCCCACCCAGTGCCTACGCCTGGCTCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR-3UTR TCA 90 bp GTGGGACGCTCCAGCGCGGCCGGAGGTACAGATGGGAACAGAGGCGTGCGGGCTAACGACACTGGAGGATaGCTTCCACAACTGGGTTTA +
Preference number: 2 (lower is better)
Translates to: VGRSSAAGGTDGNRGVRANDTGG*LPQLGL
Trigger: TAAACCCAGTTGTGGAAGTCATCCTCCAGTGTCGTT...AGCCCGCACGCCTCTGTTCCCATCTGTACCTCCGGCCGCGCTGGAGCGTCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR-3UTR GCA 90 bp CTCGGTTTCCCCGAGCCCACAGTATTGATGGCCAGTTCGGAGTGGCCTACGACGCGTCCTCCTCACTGCTaGTGGACGTCACCTGGAGGT +
Preference number: 2 (lower is better)
Translates to: LGFPEPTVLMASSEWPTTRPPHC*WTSPGG
Trigger: ACCTCCAGGTGACGTCCAGCAGCAGTGAGGAGGACG...CGTCGTAGGCCACTCCGAACTGGCCATCAATACTGTGGGCTCGGGGAAACCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR-3UTR GCA 90 bp TGGGCTTTATTCGGACGCTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGGTCCTCTCCATCAACGTCCTaGTCGCCCAGACCGTCTTCT +
Preference number: 2 (lower is better)
Translates to: WALFGRWVGLVRGWSPWSSPSTS*SPRPSS
Trigger: AGAAGACGGTCTGGGCGAGCAGGACGTTGATGGAGA...GGACCAGGGACTCCATCCCCGTACCAGCCCCACCCAGCGTCCGAATAAAGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR-3UTR CCA 90 bp AAAAAGCTCGGTTTCCCCGAGCCCACAGTATTGATGGCCAGTTCGGAGTGGCCTGGCGGCTCCGTGACGTaGCTGCCTCCGGCCATCTAC +
Preference number: 2 (lower is better)
Translates to: KKLGFPEPTVLMASSEWPGGSVT*LPPAIY
Trigger: GTAGATGGCCGGAGGCAGCCACGTCACGGAGCCGCC...AGGCCACTCCGAACTGGCCATCAATACTGTGGGCTCGGGGAAACCGAGCTTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR CAA 90 bp TGGGAGATGCAGGGCACGCGGCCTTCCATCCCCCACCCCTTAGGATaGGCAGGATTACCGACTCAACTACAGCAAGGACGACTTTGGGGG +
Preference number: 2 (lower is better)
Translates to: WEMQGTRPSIPHPLG*AGLPTQLQQGRLWG
Trigger: CCCCCAAAGTCGTCCTTGCTGTAGTTGAGTCGGTAATCCTGCCAATCCTAAGGGGTGGGGGATGGAAGGCCGCGTGCCCTGCATCTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR CAA 90 bp GGTGCAGACCTGTGCAAAAAGCTCGGTTTCCCCGAGCCCACAGTATaGATGGCCAGTTCGGAGTGGCCTACGACGCCAACGTGCTCGTCT +
Preference number: 2 (lower is better)
Translates to: GADLCKKLGFPEPTV*MASSEWPTTPTCSS
Trigger: AGACGAGCACGTTGGCGTCGTAGGCCACTCCGAACTGGCCATCAATACTGTGGGCTCGGGGAAACCGAGCTTTTTGCACAGGTCTGCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR-3UTR TCA 90 bp AAAAAGCTCGGTTTCCCCGAGCCCACAGTATTGATGGCCAGTTCGGAGTGGCCTTCCCAGAGACTTCTCTaGGCGTGCCGCTCCTGGGCA +
Preference number: 2 (lower is better)
Translates to: KKLGFPEPTVLMASSEWPSQRLL*ACRSWA
Trigger: TGCCCAGGAGCGGCACGCTCAGAGAAGTCTCTGGGA...AGGCCACTCCGAACTGGCCATCAATACTGTGGGCTCGGGGAAACCGAGCTTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR-3UTR GCA 90 bp CAGAACTGTTCGCTTATTTTCCGGTGGGAAGAGCTACTCCGAGGCCCGGACGATTGCTCGCCTACTTCCTaGCGGCGCAGGGTAAGCAGT +
Preference number: 2 (lower is better)
Translates to: QNCSLIFRWEELLRGPDDCSPTS*RRRVSS
Trigger: ACTGCTTACCCTGCGCCGGCAGGAAGTAGGCGAGCA...ATCGTCCGGGCCTCGGAGTAGCTCTTCCCACCGGAAAATAAGCGAACAGTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR-3UTR CCA 90 bp ACTGTTCGCTTATTTTCCGGTGGGAAGAGCTACTCCGAGGCCCGGACGATTATTGGCCGGAGGTACAGATaGGAACAGAGGCGTGCGGGC +
Preference number: 2 (lower is better)
Translates to: TVRLFSGGKSYSEARTIIGRRYR*EQRRAG
Trigger: GCCCGCACGCCTCTGTTCCCATCTGTACCTCCGGCC...AATAATCGTCCGGGCCTCGGAGTAGCTCTTCCCACCGGAAAATAAGCGAACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR-3UTR GCA 90 bp GAGGTGGAGTTCACTTTTGCCGTAGACAACGACGGCAAGACCATCAACAAGATCCTTCCACGGTGGGCTTaGCCCGGACCAACGACACTG +
Preference number: 2 (lower is better)
Translates to: EVEFTFAVDNDGKTINKILPRWA*PGPTTL
Trigger: CAGTGTCGTTGGTCCGGGGCAAGCCCACCGTGGAAG...GATCTTGTTGATGGTCTTGCCGTCGTTGTCTACGGCAAAAGTGAACTCCACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR CAA 90 bp AAATGCACGGTCTCCATCAACGTCCTGCTCGCCCAGACCGTCTTCTaGTTCCTCATTGCCCAGAAAATCCCAGAGACTTCTCTGAGCGTG +
Preference number: 2 (lower is better)
Translates to: KCTVSINVLLAQTVF*FLIAQKIPETSLSV
Trigger: CACGCTCAGAGAAGTCTCTGGGATTTTCTGGGCAATGAGGAACAAGAAGACGGTCTGGGCGAGCAGGACGTTGATGGAGACCGTGCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR-3UTR CCA 90 bp GAAATCATTCTCGATTGTTACTCTAGTCCTGCCTTCTGGCTTTCCATACCCTCACGGGGATGGAGTCCCTaGTCCGCCGTCCTCCTCACT +
Preference number: 2 (lower is better)
Translates to: EIILDCYSSPAFWLSIPSRGWSP*SAVLLT
Trigger: AGTGAGGAGGACGGCGGACCAGGGACTCCATCCCCG...TGAGGGTATGGAAAGCCAGAAGGCAGGACTAGAGTAACAATCGAGAATGATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR-3UTR TCA 90 bp GACTTAGACACAGTATTTCGTTCCCAGGCACAGCATAATTGGTTTAGGAGACAGGTGCTGGAAAACAAGTaGGAACCGGGCCAGACGCCA +
Preference number: 2 (lower is better)
Translates to: DLDTVFRSQAQHNWFRRQVLENK*EPGQTP
Trigger: TGGCGTCTGGCCCGGTTCTCACTTGTTTTCCAGCAC...CTGTCTCCTAAACCAATTATGCTGTGCCTGGGAACGAAATACTGTGTCTAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR-3UTR TCA 90 bp ACACAGAGGCCTATACTGGTGAAGCCCCTGCCTGCTCAGAAAAACCCGCTTCTAAGCTTACCCCTGTCCTaGAATCATTCTCGATTGTTA +
Preference number: 2 (lower is better)
Translates to: TQRPILVKPLPAQKNPLLSLPLS*NHSRLL
Trigger: TAACAATCGAGAATGATTTCAGGACAGGGGTAAGCT...TAGAAGCGGGTTTTTCTGAGCAGGCAGGGGCTTCACCAGTATAGGCCTCTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR-3UTR TCA 90 bp GACTTAGACACAGTATTTCGTTCCCAGGCACAGCATAATTGGTTTAGGAGACAGTCTCTTCAACAACTATaGCCCAGGAAGCCGGCCAGT +
Preference number: 2 (lower is better)
Translates to: DLDTVFRSQAQHNWFRRQSLQQL*PRKPAS
Trigger: ACTGGCCGGCTTCCTGGGTCATAGTTGTTGAAGAGA...CTGTCTCCTAAACCAATTATGCTGTGCCTGGGAACGAAATACTGTGTCTAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR CCA 72 bp CCGGGCTCGCTCCCGGGAGGCGGGGCCCGCTCTCACTaGCTCTCCCTCCAGCCGGCGGCCAGAAATGCACGG +
Preference number: 3 (lower is better)
Translates to: PGSLPGGGARSH*LSLQPAARNAR
Trigger: CCGTGCATTTCTGGCCGCCGGCTGGAGGGAGAGCCAGTGAGAGCGGGCCCCGCCTCCCGGGAGCGAGCCCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR TCA 72 bp AGAACGGCGAGTGGGCCATCGACTTCTGCCCGGGGGTaGTCCGCCGCCACCACGGTGGCGCCACCGACGGCC +
Preference number: 3 (lower is better)
Translates to: RTASGPSTSARG*SAATTVAPPTA
Trigger: GGCCGTCGGTGGCGCCACCGTGGTGGCGGCGGATCACCCCCGGGCAGAAGTCGATGGCCCACTCGCCGTTCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR GCA 72 bp CGTCCCGCAGAGAACGGCGAGTGGGCCATCGACTTCTaGCCGGGGGTGATCCGCCGCCACCACGGTGGCGCC +
Preference number: 3 (lower is better)
Translates to: RPAENGEWAIDF*PGVIRRHHGGA
Trigger: GGCGCCACCGTGGTGGCGGCGGATCACCCCCGGGCAGAAGTCGATGGCCCACTCGCCGTTCTCTGCGGGACG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR GCA 72 bp CTTGGGCTACCCGGCTCAGCGCTGCACCCGGATCCCTaGCGTCTGGGGCTGGGCCCGCGCTGCCGTCTAGTC +
Preference number: 3 (lower is better)
Translates to: LGLPGSALHPDP*RLGLGPRCRLV
Trigger: GACTAGACGGCAGCGCGGGCCCAGCCCCAGACGGCAGGGATCCGGGTGCAGCGCTGAGCCGGGTAGCCCAAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521575.1
3UTR-3UTR CAA 90 bp GCTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGGTCCGCCGTCCTCCTCACTGCCCCTGCCCTGCGGCTaGGGCTACCCGGCTCAGCGC +
Preference number: 3 (lower is better)
Translates to: AGWGWYGDGVPGPPSSSLPLPCG*GYPAQR
Trigger: GCGCTGAGCCGGGTAGCCCAAGCCGCAGGGCAGGGG...CAGTGAGGAGGACGGCGGACCAGGGACTCCATCCCCGTACCAGCCCCACCCAGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521575.1
3UTR GCA 72 bp GCTGGGCCCGCGCTGCCGTCTAGTCGCCGCGCCTCCTaGTGCAGCCACAGGGCTGAGATCTGCATTGGGGGC +
Preference number: 3 (lower is better)
Translates to: AGPALPSSRRAS*CSHRAEICIGG
Trigger: GCCCCCAATGCAGATCTCAGCCCTGTGGCTGCAGCAGGAGGCGCGGCGACTAGACGGCAGCGCGGGCCCAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521575.1
3UTR CCA 72 bp GGGCTTCGCGCTGGAGGCGGAGCCAGGCGTAGGCACTaGGTGGGACGCTCCAGCGCGGCCGGAGGTACAGAT +
Preference number: 3 (lower is better)
Translates to: GLRAGGGARRRH*VGRSSAAGGTD
Trigger: ATCTGTACCTCCGGCCGCGCTGGAGCGTCCCACCCAGTGCCTACGCCTGGCTCCGCCTCCAGCGCGAAGCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR TCA 72 bp CCAGAGACTTCTCTGAGCGTGCCGCTCCTGGGCAGGTaGAGCCGGAGCCCCCGCGGGGGTGTGGCCAGTGTG +
Preference number: 3 (lower is better)
Translates to: PETSLSVPLLGR*SRSPRGGVASV
Trigger: CACACTGGCCACACCCCCGCGGGGGCTCCGGCTTCACCTGCCCAGGAGCGGCACGCTCAGAGAAGTCTCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR CCA 72 bp GTCTCGCCCCGCCCTGGGCTTTATTCGGACGCTGGGTaGGGCTGGTACGGGGATGGAGTCCCTGGTCCGCCG +
Preference number: 3 (lower is better)
Translates to: VSPRPGLYSDAG*GWYGDGVPGPP
Trigger: CGGCGGACCAGGGACTCCATCCCCGTACCAGCCCCACCCAGCGTCCGAATAAAGCCCAGGGCGGGGCGAGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
3UTR CCA 72 bp TTCGCGCTGGAGGCGGAGCCAGGCGTAGGCACTGGGTaGGACGCTCCAGCGCGGCCGGAGGTACAGATGGGA +
Preference number: 3 (lower is better)
Translates to: FALEAEPGVGTG*DAPARPEVQMG
Trigger: TCCCATCTGTACCTCCGGCCGCGCTGGAGCGTCCCACCCAGTGCCTACGCCTGGCTCCGCCTCCAGCGCGAA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR CCA 72 bp TGCAGACCCCGTCCACACAGGCATAGCCATGCTCCCTaGACTAGGAGCCGGGCGCTGGCGCCCACCGCAGCC +
Preference number: 3 (lower is better)
Translates to: CRPRPHRHSHAP*TRSRALAPTAA
Trigger: GGCTGCGGTGGGCGCCAGCGCCCGGCTCCTAGTCCAGGGAGCATGGCTATGCCTGTGTGGACGGGGTCTGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521575.1
3UTR CCA 72 bp CTGGGTGGGACGCTCCAGCGCGGCCGGAGGTACAGATaGGAACAGAGGCGTGCGGGCTGGGCTTGGGTGAAG +
Preference number: 3 (lower is better)
Translates to: LGGTLQRGRRYR*EQRRAGWAWVK
Trigger: CTTCACCCAAGCCCAGCCCGCACGCCTCTGTTCCCATCTGTACCTCCGGCCGCGCTGGAGCGTCCCACCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR CCA 72 bp GCCAACGTGCTCGTCTACGAGGGCGGCTCCGTGACGTaGCTGCCTCCGGCCATCTACCGCAGCGTCTGCGCA +
Preference number: 3 (lower is better)
Translates to: ANVLVYEGGSVT*LPPAIYRSVCA
Trigger: TGCGCAGACGCTGCGGTAGATGGCCGGAGGCAGCCACGTCACGGAGCCGCCCTCGTAGACGAGCACGTTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR TCA 72 bp ACGACGCCAACGTGCTCGTCTACGAGGGCGGCTCCGTaGCGTGGCTGCCTCCGGCCATCTACCGCAGCGTCT +
Preference number: 3 (lower is better)
Translates to: TTPTCSSTRAAP*RGCLRPSTAAS
Trigger: AGACGCTGCGGTAGATGGCCGGAGGCAGCCACGTCACGGAGCCGCCCTCGTAGACGAGCACGTTGGCGTCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR GCA 72 bp GGGATGGAGTCCCTGGTCCGCCGTCCTCCTCACTGCTaGTGGACGTCACCTGGAGGTCTCCCGAGTAGCTCT +
Preference number: 3 (lower is better)
Translates to: GMESLVRRPPHC*WTSPGGLPSSS
Trigger: AGAGCTACTCGGGAGACCTCCAGGTGACGTCCAGCAGCAGTGAGGAGGACGGCGGACCAGGGACTCCATCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
3UTR-3UTR CAA 90 bp TGGGCTTTATTCGGACGCTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGGTCCTCCCGAGTAGCTCTCTaGGGGGACAGTCCGGCTCAG +
Preference number: 3 (lower is better)
Translates to: WALFGRWVGLVRGWSPWSSRVAL*GDSPAQ
Trigger: CTGAGCCGGACTGTCCCCCAAGAGAGCTACTCGGGA...GGACCAGGGACTCCATCCCCGTACCAGCCCCACCCAGCGTCCGAATAAAGCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
3UTR GCA 72 bp GAGCTCACCGGTTCTCCGGGGATTCCGAGGCCTAGCTaGTGTTGCGACTGTCGCAGGAATGAGGCAGACCCC +
Preference number: 3 (lower is better)
Translates to: ELTGSPGIPRPS*CCDCRRNEADP
Trigger: GGGGTCTGCCTCATTCCTGCGACAGTCGCAACAGCAGCTAGGCCTCGGAATCCCCGGAGAACCGGTGAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521575.1
3UTR-3UTR CAA 90 bp CTCGGTTTCCCCGAGCCCACAGTATTGATGGCCAGTTCGGAGTGGCCTACGACGTCCCGAGTAGCTCTCTaGGGGGACAGTCCGGCTCAG +
Preference number: 3 (lower is better)
Translates to: LGFPEPTVLMASSEWPTTSRVAL*GDSPAQ
Trigger: CTGAGCCGGACTGTCCCCCAAGAGAGCTACTCGGGA...CGTCGTAGGCCACTCCGAACTGGCCATCAATACTGTGGGCTCGGGGAAACCGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR-3UTR CAA 90 bp ATTCCGAGGCCTAGCTGCTGTTGCGACTGTCGCAGGAATGAGGCAGACCCCTGCGGGCTGAGATCTGCATaGGGGGCACAGGGGTTAGCG +
Preference number: 3 (lower is better)
Translates to: IPRPSCCCDCRRNEADPCGLRSA*GAQGLA
Trigger: CGCTAACCCCTGTGCCCCCAATGCAGATCTCAGCCC...GCAGGGGTCTGCCTCATTCCTGCGACAGTCGCAACAGCAGCTAGGCCTCGGAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521575.1
3UTR GCA 72 bp TGCTGTTGCGACTGTCGCAGGAATGAGGCAGACCCCTaGAGACCCCGTCCACACAGGCATAGCCATGCTCCC +
Preference number: 3 (lower is better)
Translates to: CCCDCRRNEADP*RPRPHRHSHAP
Trigger: GGGAGCATGGCTATGCCTGTGTGGACGGGGTCTGCAGGGGTCTGCCTCATTCCTGCGACAGTCGCAACAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521575.1
3UTR GCA 72 bp ACCGGTTCTCCGGGGATTCCGAGGCCTAGCTGCTGTTaGGACTGTCGCAGGAATGAGGCAGACCCCTGCAGA +
Preference number: 3 (lower is better)
Translates to: TGSPGIPRPSCC*DCRRNEADPCR
Trigger: TCTGCAGGGGTCTGCCTCATTCCTGCGACAGTCGCAACAGCAGCTAGGCCTCGGAATCCCCGGAGAACCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521575.1
3UTR CCA 72 bp ATGGAGTCCCTGGTCCGCCGTCCTCCTCACTGCTGCTaGACGTCACCTGGAGGTCTCCCGAGTAGCTCTCTT +
Preference number: 3 (lower is better)
Translates to: MESLVRRPPHCC*TSPGGLPSSSL
Trigger: AAGAGAGCTACTCGGGAGACCTCCAGGTGACGTCCAGCAGCAGTGAGGAGGACGGCGGACCAGGGACTCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
3UTR CCA 72 bp TTCCCCGAGCCCACAGTATTGATGGCCAGTTCGGAGTaGCCTACGACGCCAACGTGCTCGTCTACGAGGGCG +
Preference number: 3 (lower is better)
Translates to: FPEPTVLMASSE*PTTPTCSSTRA
Trigger: CGCCCTCGTAGACGAGCACGTTGGCGTCGTAGGCCACTCCGAACTGGCCATCAATACTGTGGGCTCGGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR GCA 72 bp CCGGCGGCCAGAAATGCACGGTCTCCATCAACGTCCTaGTCGCCCAGACCGTCTTCTTGTTCCTCATTGCCC +
Preference number: 3 (lower is better)
Translates to: PAARNARSPSTS*SPRPSSCSSLP
Trigger: GGGCAATGAGGAACAAGAAGACGGTCTGGGCGAGCAGGACGTTGATGGAGACCGTGCATTTCTGGCCGCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR TCA 72 bp TGTTCCTCATTGCCCAGAAAATCCCAGAGACTTCTCTaGGCGTGCCGCTCCTGGGCAGGTGAAGCCGGAGCC +
Preference number: 3 (lower is better)
Translates to: CSSLPRKSQRLL*ACRSWAGEAGA
Trigger: GGCTCCGGCTTCACCTGCCCAGGAGCGGCACGCTCAGAGAAGTCTCTGGGATTTTCTGGGCAATGAGGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR-3UTR CAA 90 bp GTAGCTCTCTTGGGGGACAGTCCGGCTCAGTGCCTCCCTAGCCCCGCCGCCTCTTCTTCTTGTTCCTCATaGCCCAGAAAATCCCAGAGA +
Preference number: 3 (lower is better)
Translates to: VALLGDSPAQCLPSPAASSSCSS*PRKSQR
Trigger: TCTCTGGGATTTTCTGGGCAATGAGGAACAAGAAGA...AGAGGCGGCGGGGCTAGGGAGGCACTGAGCCGGACTGTCCCCCAAGAGAGCTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR TCA 72 bp ACGGTGGGCTTGCCCCGGACCAACGACACTGGAGGATaGCTTCCACAACTGGGTTTAGCTTACCCCTGTCCT +
Preference number: 3 (lower is better)
Translates to: TVGLPRTNDTGG*LPQLGLAYPCP
Trigger: AGGACAGGGGTAAGCTAAACCCAGTTGTGGAAGTCATCCTCCAGTGTCGTTGGTCCGGGGCAAGCCCACCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR CCA 72 bp GACTTCCACGGTGGGCTTGCCCCGGACCAACGACACTaGAGGATGACTTCCACAACTGGGTTTAGCTTACCC +
Preference number: 3 (lower is better)
Translates to: DFHGGLAPDQRH*RMTSTTGFSLP
Trigger: GGGTAAGCTAAACCCAGTTGTGGAAGTCATCCTCCAGTGTCGTTGGTCCGGGGCAAGCCCACCGTGGAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR TCA 72 bp TGTGCAAAAAGCTCGGTTTCCCCGAGCCCACAGTATTaGTGGCCAGTTCGGAGTGGCCTACGACGCCAACGT +
Preference number: 3 (lower is better)
Translates to: CAKSSVSPSPQY*WPVRSGLRRQR
Trigger: ACGTTGGCGTCGTAGGCCACTCCGAACTGGCCATCAATACTGTGGGCTCGGGGAAACCGAGCTTTTTGCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR GCA 72 bp CGTCCTGCTCGCCCAGACCGTCTTCTTGTTCCTCATTaGCCAGAAAATCCCAGAGACTTCTCTGAGCGTGCC +
Preference number: 3 (lower is better)
Translates to: RPARPDRLLVPH*PENPRDFSERA
Trigger: GGCACGCTCAGAGAAGTCTCTGGGATTTTCTGGGCAATGAGGAACAAGAAGACGGTCTGGGCGAGCAGGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR GCA 72 bp ATCTCTTCAACAACTATGACCCAGGAAGCCGGCCAGTaGGGGAGCCTGAGGATACTGTCACCATCAGCCTCA +
Preference number: 3 (lower is better)
Translates to: ISSTTMTQEAGQ*GSLRILSPSAS
Trigger: TGAGGCTGATGGTGACAGTATCCTCAGGCTCCCGCACTGGCCGGCTTCCTGGGTCATAGTTGTTGAAGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR GCA 72 bp GTCCTGCCTTCTGGCTTTCCATACCCTCAACGAGAATaGCCTTTTCTGTCCGTAATTGCCCCCATCCTGACG +
Preference number: 3 (lower is better)
Translates to: VLPSGFPYPQRE*PFLSVIAPILT
Trigger: CGTCAGGATGGGGGCAATTACGGACAGAAAAGGGCATTCTCGTTGAGGGTATGGAAAGCCAGAAGGCAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR-3UTR CAA 90 bp GAGGTGGAGTTCACTTTTGCCGTAGACAACGACGGCAAGACCATCAACAAGATCGCCCAGACCGTCTTCTaGTTCCTCATTGCCCAGAAA +
Preference number: 3 (lower is better)
Translates to: EVEFTFAVDNDGKTINKIAQTVF*FLIAQK
Trigger: TTTCTGGGCAATGAGGAACAAGAAGACGGTCTGGGC...GATCTTGTTGATGGTCTTGCCGTCGTTGTCTACGGCAAAAGTGAACTCCACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR TCA 72 bp AGGAGACTCTCACCACTAGCGTCTGGATTGGAATCGTaGGTCAAATCTGGGGAATGGTGTGAGGTCTTGTCC +
Preference number: 3 (lower is better)
Translates to: RRLSPLASGLES*VKSGEWCEVLS
Trigger: GGACAAGACCTCACACCATTCCCCAGATTTGACTCACGATTCCAATCCAGACGCTAGTGGTGAGAGTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR CCA 72 bp GCAGGATTACCGACTCAACTACAGCAAGGACGACTTTaGGGGTATAGAAACCCTGCGAGTCCCTTCAGAACT +
Preference number: 3 (lower is better)
Translates to: AGLPTQLQQGRL*GYRNPASPFRT
Trigger: AGTTCTGAAGGGACTCGCAGGGTTTCTATACCCCCAAAGTCGTCCTTGCTGTAGTTGAGTCGGTAATCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR GCA 72 bp TCAGACGTACAATGCCGAAGAGGTGGAGTTCACTTTTaGCGTAGACAACGACGGCAAGACCATCAACAAGAT +
Preference number: 3 (lower is better)
Translates to: SDVQCRRGGVHF*RRQRRQDHQQD
Trigger: ATCTTGTTGATGGTCTTGCCGTCGTTGTCTACGGCAAAAGTGAACTCCACCTCTTCGGCATTGTACGTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR TCA 90 bp GCTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGGTCCGCCGTCCTCCTCACTGGCGGGCGCCCCGCTCTaGCAGCCAGCTGACCGTGCC +
Preference number: 4 (lower is better)
Translates to: AGWGWYGDGVPGPPSSSLAGAPL*QPADRA
Trigger: GGCACGGTCAGCTGGCTGTCAGAGCGGGGCGCCCGC...CAGTGAGGAGGACGGCGGACCAGGGACTCCATCCCCGTACCAGCCCCACCCAGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR CCA 90 bp GCGGAGCCAGGCGTAGGCACTGGGTGGGACGCTCCAGCGCGGCCGGAGGTACAGGGAGGGAAGCCGGCCTaGGGTGCGGGCTGGACTTGG +
Preference number: 4 (lower is better)
Translates to: AEPGVGTGWDAPARPEVQGGKPA*GAGWTW
Trigger: CCAAGTCCAGCCCGCACCCCAGGCCGGCTTCCCTCC...CTGTACCTCCGGCCGCGCTGGAGCGTCCCACCCAGTGCCTACGCCTGGCTCCGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR TCA 90 bp TCGGACGCTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGGTCCGCCGTCCTCCGCTCTGACAGCCAGCTaGCCGTGCCCCCGTCCCGCA +
Preference number: 4 (lower is better)
Translates to: SDAGWGWYGDGVPGPPSSALTAS*PCPRPA
Trigger: TGCGGGACGGGGGCACGGTCAGCTGGCTGTCAGAGC...GGAGGACGGCGGACCAGGGACTCCATCCCCGTACCAGCCCCACCCAGCGTCCGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR GCA 90 bp CTGCCGTCTGGGGCTGGGCCCGCGCTGCCGTCTAGTCGCCGCGCCTCCTGCTGCGCAGGCAGCATCCCCTaGATCTTCGGTTCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: LPSGAGPALPSSRRASCCAGSIP*IFGSGG
Trigger: GCCACCCGAACCGAAGATGCAGGGGATGCTGCCTGC...GCAGCAGGAGGCGCGGCGACTAGACGGCAGCGCGGGCCCAGCCCCAGACGGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521575.1
CDS-3UTR GCA 90 bp TCGGACGCTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGGTCCGCCGTCCTCCGACAGTCCGGCTCAGTaGCTCCCTAGCCCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: SDAGWGWYGDGVPGPPSSDSPAQ*LPSPAA
Trigger: GGCGGCGGGGCTAGGGAGGCACTGAGCCGGACTGTC...GGAGGACGGCGGACCAGGGACTCCATCCCCGTACCAGCCCCACCCAGCGTCCGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR CCA 90 bp CTGCCGTCTGGGGCTGGGCCCGCGCTGCCGTCTAGTCGCCGCGCCTCCTGCTGCGGCCAGTGTGAAGGGTaGGGGCGTGGCCAAAACCCA +
Preference number: 4 (lower is better)
Translates to: LPSGAGPALPSSRRASCCGQCEG*GRGQNP
Trigger: TGGGTTTTGGCCACGCCCCCACCCTTCACACTGGCC...GCAGCAGGAGGCGCGGCGACTAGACGGCAGCGCGGGCCCAGCCCCAGACGGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521575.1
CDS-3UTR TCA 90 bp GACGCTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGGTCCGCCGTCCTCCTCAACTTCTGCCCGGGGGTaGTCCGCCGCCACCACGGTG +
Preference number: 4 (lower is better)
Translates to: DAGWGWYGDGVPGPPSSSTSARG*SAATTV
Trigger: CACCGTGGTGGCGGCGGATCACCCCCGGGCAGAAGT...TGAGGAGGACGGCGGACCAGGGACTCCATCCCCGTACCAGCCCCACCCAGCGTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR GCA 90 bp GGCTGTCTCGCCCCGCCCTGGGCTTTATTCGGACGCTGGGTGGGGCTGGTACGGCCGAACCCCCTGCCCTaGGGCTTGGGCTACCCGGCT +
Preference number: 4 (lower is better)
Translates to: GCLAPPWALFGRWVGLVRPNPLP*GLGYPA
Trigger: AGCCGGGTAGCCCAAGCCGCAGGGCAGGGGGTTCGG...CCGTACCAGCCCCACCCAGCGTCCGAATAAAGCCCAGGGCGGGGCGAGACAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR CCA 90 bp GGCTGTCTCGCCCCGCCCTGGGCTTTATTCGGACGCTGGGTGGGGCTGGTACGGCCCTGCCCTGCGGCTTaGGCTACCCGGCTCAGCGCT +
Preference number: 4 (lower is better)
Translates to: GCLAPPWALFGRWVGLVRPCPAA*ATRLSA
Trigger: AGCGCTGAGCCGGGTAGCCCAAGCCGCAGGGCAGGG...CCGTACCAGCCCCACCCAGCGTCCGAATAAAGCCCAGGGCGGGGCGAGACAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR CCA 90 bp CTCTTGGGGGACAGTCCGGCTCAGTGCCTCCCTAGCCCCGCCGCCTCTGGCCCCCGGGGATGGAGTCCCTaGTCCGCCGTCCTCCTCACT +
Preference number: 4 (lower is better)
Translates to: LLGDSPAQCLPSPAASGPRGWSP*SAVLLT
Trigger: AGTGAGGAGGACGGCGGACCAGGGACTCCATCCCCG...GGGGCCAGAGGCGGCGGGGCTAGGGAGGCACTGAGCCGGACTGTCCCCCAAGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000521575.1
CDS-3UTR TCA 90 bp TGGGCTTGGGTGAAGGGGTGGGCTTGGGATCGCGGCCCCGCTAGATCCCAGCTTACGAGGGCGGCTCCGTaGCGTGGCTGCCTCCGGCCA +
Preference number: 4 (lower is better)
Translates to: WAWVKGWAWDRGPARSQLTRAAP*RGCLRP
Trigger: TGGCCGGAGGCAGCCACGTCACGGAGCCGCCCTCGT...AAGCTGGGATCTAGCGGGGCCGCGATCCCAAGCCCACCCCTTCACCCAAGCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR GCA 90 bp TCTGGCTGTCTCGCCCCGCCCTGGGCTTTATTCGGACGCTGGGTGGGGCTGGTACTGCACCCGGATCCCTaGCGTCTGGGGCTGGGCCCG +
Preference number: 4 (lower is better)
Translates to: SGCLAPPWALFGRWVGLVLHPDP*RLGLGP
Trigger: CGGGCCCAGCCCCAGACGGCAGGGATCCGGGTGCAG...TACCAGCCCCACCCAGCGTCCGAATAAAGCCCAGGGCGGGGCGAGACAGCCAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR GCA 90 bp TTCCTGCCGGCGCAGGGTAAGCAGTGGCCCCGAACCTACCCCCAAACCCGGGCTACCGCAGCCCCAGCTTaGCGAACCCCCTGCCCTGCG +
Preference number: 4 (lower is better)
Translates to: FLPAQGKQWPRTYPQTRATAAPA*RTPCPA
Trigger: CGCAGGGCAGGGGGTTCGGCAAGCTGGGGCTGCGGT...AGCCCGGGTTTGGGGGTAGGTTCGGGGCCACTGCTTACCCTGCGCCGGCAGGAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR CCA 90 bp GACGCTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGGTCCGCCGTCCTCCTCAGGGCTGGTACGGGGATaGAGTCCCTGGTCCGCCGTC +
Preference number: 4 (lower is better)
Translates to: DAGWGWYGDGVPGPPSSSGLVRG*SPWSAV
Trigger: GACGGCGGACCAGGGACTCCATCCCCGTACCAGCCC...TGAGGAGGACGGCGGACCAGGGACTCCATCCCCGTACCAGCCCCACCCAGCGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR CCA 90 bp CTGGGGCTGGGCCCGCGCTGCCGTCTAGTCGCCGCGCCTCCTGCTGCAGCCACATATTCGGACGCTGGGTaGGGCTGGTACGGGGATGGA +
Preference number: 4 (lower is better)
Translates to: LGLGPRCRLVAAPPAAATYSDAG*GWYGDG
Trigger: TCCATCCCCGTACCAGCCCCACCCAGCGTCCGAATA...TGTGGCTGCAGCAGGAGGCGCGGCGACTAGACGGCAGCGCGGGCCCAGCCCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521575.1
CDS-3UTR CCA 90 bp CGCCCTGGGCTTTATTCGGACGCTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGGGGCCCGCTCTCACTaGCTCTCCCTCCAGCCGGCG +
Preference number: 4 (lower is better)
Translates to: RPGLYSDAGWGWYGDGVPGARSH*LSLQPA
Trigger: CGCCGGCTGGAGGGAGAGCCAGTGAGAGCGGGCCCC...AGGGACTCCATCCCCGTACCAGCCCCACCCAGCGTCCGAATAAAGCCCAGGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR CCA 90 bp CCCAGAGACTTCTCTGAGCGTGCCGCTCCTGGGCAGGTGAAGCCGGAGCCCCCGTCAGAGCTTCTGGGGTaGGCTCCCGGCCCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: PRDFSERAAPGQVKPEPPSELLG*APGPGS
Trigger: GGAGCCAGGGCCGGGAGCCCACCCCAGAAGCTCTGA...CGGGGGCTCCGGCTTCACCTGCCCAGGAGCGGCACGCTCAGAGAAGTCTCTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR CCA 90 bp GACGCTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGGTCCGCCGTCCTCCTCACCAGGTCAGAGCTTCTaGGGTGGGCTCCCGGCCCTG +
Preference number: 4 (lower is better)
Translates to: DAGWGWYGDGVPGPPSSSPGQSF*GGLPAL
Trigger: CAGGGCCGGGAGCCCACCCCAGAAGCTCTGACCTGG...TGAGGAGGACGGCGGACCAGGGACTCCATCCCCGTACCAGCCCCACCCAGCGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR CCA 90 bp GCTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGGTCCGCCGTCCTCCTCACTGCAGAGGCGTGCGGGCTaGGCTTGGGTGAAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: AGWGWYGDGVPGPPSSSLQRRAG*AWVKGW
Trigger: CCACCCCTTCACCCAAGCCCAGCCCGCACGCCTCTG...CAGTGAGGAGGACGGCGGACCAGGGACTCCATCCCCGTACCAGCCCCACCCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR CCA 90 bp CCCTGGGCTTTATTCGGACGCTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGGGGCGTAGGCACTGGGTaGGACGCTCCAGCGCGGCCG +
Preference number: 4 (lower is better)
Translates to: PWALFGRWVGLVRGWSPWGVGTG*DAPARP
Trigger: CGGCCGCGCTGGAGCGTCCCACCCAGTGCCTACGCC...CCAGGGACTCCATCCCCGTACCAGCCCCACCCAGCGTCCGAATAAAGCCCAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR CCA 90 bp CCTGGAGGTCTCCCGAGTAGCTCTCTTGGGGGACAGTCCGGCTCAGTGCCTCCCGGCCAGACGCCAGGCTaGAGGGAAGCCGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: PGGLPSSSLGGQSGSVPPGQTPG*REAGLG
Trigger: CCCCAGGCCGGCTTCCCTCCAGCCTGGCGTCTGGCC...GGGAGGCACTGAGCCGGACTGTCCCCCAAGAGAGCTACTCGGGAGACCTCCAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR TCA 90 bp GCTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGGTCCGCCGTCCTCCTCACTGCATCCTGACGGCCCATaGCCCTGGTGCAGACAGCCG +
Preference number: 4 (lower is better)
Translates to: AGWGWYGDGVPGPPSSSLHPDGP*PWCRQP
Trigger: CGGCTGTCTGCACCAGGGTCATGGGCCGTCAGGATG...CAGTGAGGAGGACGGCGGACCAGGGACTCCATCCCCGTACCAGCCCCACCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR GCA 90 bp GTAGCTCTCTTGGGGGACAGTCCGGCTCAGTGCCTCCCTAGCCCCGCCGCCTCTAGTCGCCGCGCCTCCTaGTGCAGCCACAGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: VALLGDSPAQCLPSPAASSRRAS*CSHRAE
Trigger: CTCAGCCCTGTGGCTGCAGCAGGAGGCGCGGCGACT...AGAGGCGGCGGGGCTAGGGAGGCACTGAGCCGGACTGTCCCCCAAGAGAGCTAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR GCA 90 bp TCCCGAGTAGCTCTCTTGGGGGACAGTCCGGCTCAGTGCCTCCCTAGCCCCGCCGCTTGCCGAACCCCCTaGCCTGCGGCTTGGGCTACC +
Preference number: 4 (lower is better)
Translates to: SRVALLGDSPAQCLPSPAACRTP*PAAWAT
Trigger: GGTAGCCCAAGCCGCAGGGCAGGGGGTTCGGCAAGC...GGCGGGGCTAGGGAGGCACTGAGCCGGACTGTCCCCCAAGAGAGCTACTCGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR GCA 90 bp CCCTGGGCTTTATTCGGACGCTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGGACCGCAGCCCCAGCTTaGCGAACCCCCTGCCCTGCG +
Preference number: 4 (lower is better)
Translates to: PWALFGRWVGLVRGWSPWTAAPA*RTPCPA
Trigger: CGCAGGGCAGGGGGTTCGGCAAGCTGGGGCTGCGGT...CCAGGGACTCCATCCCCGTACCAGCCCCACCCAGCGTCCGAATAAAGCCCAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR GCA 90 bp CTGGCTGTCTCGCCCCGCCCTGGGCTTTATTCGGACGCTGGGTGGGGCTGGTACGCGCCAGGTGGGAGATaGAGGGCACGCGGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: LAVSPRPGLYSDAGWGWYAPGGR*RARGLP
Trigger: TGGAAGGCCGCGTGCCCTGCATCTCCCACCTGGCGC...GTACCAGCCCCACCCAGCGTCCGAATAAAGCCCAGGGCGGGGCGAGACAGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR CCA 90 bp CTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGGTCCGCCGTCCTCCTCACTGCGACGCTGGGTGGGGCTaGTACGGGGATGGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: LGGAGTGMESLVRRPPHCDAGWG*YGDGVP
Trigger: AGGGACTCCATCCCCGTACCAGCCCCACCCAGCGTC...GCAGTGAGGAGGACGGCGGACCAGGGACTCCATCCCCGTACCAGCCCCACCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR TCA 90 bp GACGCTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGGTCCGCCGTCCTCCTCATCCCAGAGACTTCTCTaGGCGTGCCGCTCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: DAGWGWYGDGVPGPPSSSSQRLL*ACRSWA
Trigger: TGCCCAGGAGCGGCACGCTCAGAGAAGTCTCTGGGA...TGAGGAGGACGGCGGACCAGGGACTCCATCCCCGTACCAGCCCCACCCAGCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR GCA 90 bp CGCCCTGGGCTTTATTCGGACGCTGGGTGGGGCTGGTACGGGGATGGAGTCCCTAGTCGCCGCGCCTCCTaGTGCAGCCACAGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: RPGLYSDAGWGWYGDGVPSRRAS*CSHRAE
Trigger: CTCAGCCCTGTGGCTGCAGCAGGAGGCGCGGCGACT...AGGGACTCCATCCCCGTACCAGCCCCACCCAGCGTCCGAATAAAGCCCAGGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR GCA 90 bp GGGATTCCGAGGCCTAGCTGCTGTTGCGACTGTCGCAGGAATGAGGCAGACCCCCTGCACCCGGATCCCTaGCGTCTGGGGCTGGGCCCG +
Preference number: 4 (lower is better)
Translates to: GIPRPSCCCDCRRNEADPLHPDP*RLGLGP
Trigger: CGGGCCCAGCCCCAGACGGCAGGGATCCGGGTGCAG...GGGGTCTGCCTCATTCCTGCGACAGTCGCAACAGCAGCTAGGCCTCGGAATCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521575.1
CDS-3UTR GCA 90 bp CCCGGGAAAAGCTCTGGCTGTCTCGCCCCGCCCTGGGCTTTATTCGGACGCTGGTACCCGGCTCAGCGCTaGACCCGGATCCCTGCCGTC +
Preference number: 4 (lower is better)
Translates to: PGKSSGCLAPPWALFGRWYPAQR*TRIPAV
Trigger: GACGGCAGGGATCCGGGTGCAGCGCTGAGCCGGGTA...CCAGCGTCCGAATAAAGCCCAGGGCGGGGCGAGACAGCCAGAGCTTTTCCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR GCA 90 bp TTTATTCGGACGCTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGGTCCGCCGTCCGAACCCCCTGCCCTaGGGCTTGGGCTACCCGGCT +
Preference number: 4 (lower is better)
Translates to: FIRTLGGAGTGMESLVRRPNPLP*GLGYPA
Trigger: AGCCGGGTAGCCCAAGCCGCAGGGCAGGGGGTTCGG...ACGGCGGACCAGGGACTCCATCCCCGTACCAGCCCCACCCAGCGTCCGAATAAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR GCA 90 bp TCGGACGCTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGGTCCGCCGTCCTCCAATGAGGCAGACCCCTaGAGACCCCGTCCACACAGG +
Preference number: 4 (lower is better)
Translates to: SDAGWGWYGDGVPGPPSSNEADP*RPRPHR
Trigger: CCTGTGTGGACGGGGTCTGCAGGGGTCTGCCTCATT...GGAGGACGGCGGACCAGGGACTCCATCCCCGTACCAGCCCCACCCAGCGTCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR GCA 90 bp GCTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGGTCCGCCGTCCTCCTCACTGCGCCGTCCTCCTCACTaGTGCTGGACGTCACCTGGA +
Preference number: 4 (lower is better)
Translates to: AGWGWYGDGVPGPPSSSLRRPPH*CWTSPG
Trigger: TCCAGGTGACGTCCAGCAGCAGTGAGGAGGACGGCG...CAGTGAGGAGGACGGCGGACCAGGGACTCCATCCCCGTACCAGCCCCACCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR CCA 90 bp TCCCGAGTAGCTCTCTTGGGGGACAGTCCGGCTCAGTGCCTCCCTAGCCCCGCCGGACAGGAGAAGGGCTaGGGGACGCGTCTGTCGTCG +
Preference number: 4 (lower is better)
Translates to: SRVALLGDSPAQCLPSPAGQEKG*GTRLSS
Trigger: CGACGACAGACGCGTCCCCCAGCCCTTCTCCTGTCC...GGCGGGGCTAGGGAGGCACTGAGCCGGACTGTCCCCCAAGAGAGCTACTCGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR CCA 90 bp CCTGGAGGTCTCCCGAGTAGCTCTCTTGGGGGACAGTCCGGCTCAGTGCCTCCCGGGTGTCCAGGGAGCTaGGGGTCCCCTTCATGGCCG +
Preference number: 4 (lower is better)
Translates to: PGGLPSSSLGGQSGSVPPGCPGS*GSPSWP
Trigger: CGGCCATGAAGGGGACCCCCAGCTCCCTGGACACCC...GGGAGGCACTGAGCCGGACTGTCCCCCAAGAGAGCTACTCGGGAGACCTCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR CCA 90 bp GGACGCTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGGTCCGCCGTCCTCCTCGGAGGGCCACCTCGGTaGAGCTGTGGAAGTGGTAGA +
Preference number: 4 (lower is better)
Translates to: GRWVGLVRGWSPWSAVLLGGPPR*SCGSGR
Trigger: TCTACCACTTCCACAGCTCCACCGAGGTGGCCCTCC...GAGGAGGACGGCGGACCAGGGACTCCATCCCCGTACCAGCCCCACCCAGCGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR CCA 90 bp TCTGGCTGTCTCGCCCCGCCCTGGGCTTTATTCGGACGCTGGGTGGGGCTGGTAGACAGAAGCGGGGGCTaGAGGGCCACCTCGGTGGAG +
Preference number: 4 (lower is better)
Translates to: SGCLAPPWALFGRWVGLVDRSGG*RATSVE
Trigger: CTCCACCGAGGTGGCCCTCCAGCCCCCGCTTCTGTC...TACCAGCCCCACCCAGCGTCCGAATAAAGCCCAGGGCGGGGCGAGACAGCCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR CCA 90 bp CCTGGAGGTCTCCCGAGTAGCTCTCTTGGGGGACAGTCCGGCTCAGTGCCTCCCGCCTGGGGTGCGGGCTaGACTTGGTTGGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: PGGLPSSSLGGQSGSVPPAWGAG*TWLGKG
Trigger: CCCCTTCCCCAACCAAGTCCAGCCCGCACCCCAGGC...GGGAGGCACTGAGCCGGACTGTCCCCCAAGAGAGCTACTCGGGAGACCTCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR TCA 90 bp CTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGGTCCGCCGTCCTCCTCACTGCTGGGAGGAGGAACGGTaGTGTCATGCCTTCCGGGCT +
Preference number: 4 (lower is better)
Translates to: LGGAGTGMESLVRRPPHCWEEER*CHAFRA
Trigger: AGCCCGGAAGGCATGACATCACCGTTCCTCCTCCCA...GCAGTGAGGAGGACGGCGGACCAGGGACTCCATCCCCGTACCAGCCCCACCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR TCA 90 bp CCTGGAGGTCTCCCGAGTAGCTCTCTTGGGGGACAGTCCGGCTCAGTGCCTCCCGAGAAGCCGTGTTTGTaGGGTCAGCGCGCGGCGCCT +
Preference number: 4 (lower is better)
Translates to: PGGLPSSSLGGQSGSVPPEKPCL*GQRAAP
Trigger: AGGCGCCGCGCGCTGACCTCACAAACACGGCTTCTC...GGGAGGCACTGAGCCGGACTGTCCCCCAAGAGAGCTACTCGGGAGACCTCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR TCA 90 bp AAAGCTCTGGCTGTCTCGCCCCGCCCTGGGCTTTATTCGGACGCTGGGTGGGGCACTCACCCCGTGTCCTaGGCTCACCGGTTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: KALAVSPRPGLYSDAGWGTHPVS*AHRFSG
Trigger: CCCGGAGAACCGGTGAGCTCAGGACACGGGGTGAGT...GCCCCACCCAGCGTCCGAATAAAGCCCAGGGCGGGGCGAGACAGCCAGAGCTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR TCA 90 bp GACGCTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGGTCCGCCGTCCTCCTCACCGAGCCCACAGTATTaGTGGCCAGTTCGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: DAGWGWYGDGVPGPPSSSPSPQY*WPVRSG
Trigger: GCCACTCCGAACTGGCCATCAATACTGTGGGCTCGG...TGAGGAGGACGGCGGACCAGGGACTCCATCCCCGTACCAGCCCCACCCAGCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR GCA 90 bp TCACCCCGTGTCCTGAGCTCACCGGTTCTCCGGGGATTCCGAGGCCTAGCTGCTTACCCGGCTCAGCGCTaGACCCGGATCCCTGCCGTC +
Preference number: 4 (lower is better)
Translates to: SPRVLSSPVLRGFRGLAAYPAQR*TRIPAV
Trigger: GACGGCAGGGATCCGGGTGCAGCGCTGAGCCGGGTA...AGCAGCTAGGCCTCGGAATCCCCGGAGAACCGGTGAGCTCAGGACACGGGGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521575.1
CDS-3UTR GCA 90 bp AAAAGCTCTGGCTGTCTCGCCCCGCCCTGGGCTTTATTCGGACGCTGGGTGGGGGCTTGCCGAACCCCCTaGCCTGCGGCTTGGGCTACC +
Preference number: 4 (lower is better)
Translates to: KSSGCLAPPWALFGRWVGACRTP*PAAWAT
Trigger: GGTAGCCCAAGCCGCAGGGCAGGGGGTTCGGCAAGC...CCCCACCCAGCGTCCGAATAAAGCCCAGGGCGGGGCGAGACAGCCAGAGCTTTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR GCA 90 bp CTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGGTCCGCCGTCCTCCTCACTGCTGCTCGCCTACTTCCTaGCGGCGCAGGGTAAGCAGT +
Preference number: 4 (lower is better)
Translates to: LGGAGTGMESLVRRPPHCCSPTS*RRRVSS
Trigger: ACTGCTTACCCTGCGCCGGCAGGAAGTAGGCGAGCA...GCAGTGAGGAGGACGGCGGACCAGGGACTCCATCCCCGTACCAGCCCCACCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR GCA 90 bp TCGGACGCTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGGTCCGCCGTCCTCCATCTACCGCAGCGTCTaGGCAGTGGAGGTCACCTAC +
Preference number: 4 (lower is better)
Translates to: SDAGWGWYGDGVPGPPSSIYRSV*AVEVTY
Trigger: GTAGGTGACCTCCACTGCGCAGACGCTGCGGTAGAT...GGAGGACGGCGGACCAGGGACTCCATCCCCGTACCAGCCCCACCCAGCGTCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR CCA 90 bp AGTGGCCTACGACGCCAACGTGCTCGTCTACGAGGGCGGCTCCGTGACGTGGCTGGACAGGAGAAGGGCTaGGGGACGCGTCTGTCGTCG +
Preference number: 4 (lower is better)
Translates to: SGLRRQRARLRGRLRDVAGQEKG*GTRLSS
Trigger: CGACGACAGACGCGTCCCCCAGCCCTTCTCCTGTCC...AGCCACGTCACGGAGCCGCCCTCGTAGACGAGCACGTTGGCGTCGTAGGCCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR CCA 90 bp GTAGCTCTCTTGGGGGACAGTCCGGCTCAGTGCCTCCCTAGCCCCGCCGCCTCTCATAGCCATGCTCCCTaGACTAGGAGCCGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: VALLGDSPAQCLPSPAASHSHAP*TRSRAL
Trigger: CAGCGCCCGGCTCCTAGTCCAGGGAGCATGGCTATG...AGAGGCGGCGGGGCTAGGGAGGCACTGAGCCGGACTGTCCCCCAAGAGAGCTAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR CCA 90 bp CCCAGAGACTTCTCTGAGCGTGCCGCTCCTGGGCAGGTGAAGCCGGAGCCCCCGTATTCGGACGCTGGGTaGGGCTGGTACGGGGATGGA +
Preference number: 4 (lower is better)
Translates to: PRDFSERAAPGQVKPEPPYSDAG*GWYGDG
Trigger: TCCATCCCCGTACCAGCCCCACCCAGCGTCCGAATA...CGGGGGCTCCGGCTTCACCTGCCCAGGAGCGGCACGCTCAGAGAAGTCTCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR CCA 90 bp CTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGGTCCGCCGTCCTCCTCACTGCTGCTCATCTCGGGCCTaGTGCTGCTCGCCTACTTCC +
Preference number: 4 (lower is better)
Translates to: LGGAGTGMESLVRRPPHCCSSRA*CCSPTS
Trigger: GGAAGTAGGCGAGCAGCACCAGGCCCGAGATGAGCA...GCAGTGAGGAGGACGGCGGACCAGGGACTCCATCCCCGTACCAGCCCCACCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR CCA 90 bp AAAGCTCTGGCTGTCTCGCCCCGCCCTGGGCTTTATTCGGACGCTGGGTGGGGCAGGGGACTTCCACGGTaGGCTTGCCCCGGACCAACG +
Preference number: 4 (lower is better)
Translates to: KALAVSPRPGLYSDAGWGRGLPR*ACPGPT
Trigger: CGTTGGTCCGGGGCAAGCCCACCGTGGAAGTCCCCT...GCCCCACCCAGCGTCCGAATAAAGCCCAGGGCGGGGCGAGACAGCCAGAGCTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR CCA 90 bp TCACCTGGAGGTCTCCCGAGTAGCTCTCTTGGGGGACAGTCCGGCTCAGTGCCTCCAGGCAGCGCCAGGTaGGAGATGCAGGGCACGCGG +
Preference number: 4 (lower is better)
Translates to: SPGGLPSSSLGGQSGSVPPGSAR*EMQGTR
Trigger: CCGCGTGCCCTGCATCTCCCACCTGGCGCTGCCTGG...AGGCACTGAGCCGGACTGTCCCCCAAGAGAGCTACTCGGGAGACCTCCAGGTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR TCA 90 bp AAAAGCTCTGGCTGTCTCGCCCCGCCCTGGGCTTTATTCGGACGCTGGGTGGGGGAGAAGCCGTGTTTGTaGGGTCAGCGCGCGGCGCCT +
Preference number: 4 (lower is better)
Translates to: KSSGCLAPPWALFGRWVGEKPCL*GQRAAP
Trigger: AGGCGCCGCGCGCTGACCTCACAAACACGGCTTCTC...CCCCACCCAGCGTCCGAATAAAGCCCAGGGCGGGGCGAGACAGCCAGAGCTTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR TCA 90 bp CCTGGAGGTCTCCCGAGTAGCTCTCTTGGGGGACAGTCCGGCTCAGTGCCTCCCCGACTGTCGCAGGAATaGGGCAGACCCCTGCAGACC +
Preference number: 4 (lower is better)
Translates to: PGGLPSSSLGGQSGSVPPRLSQE*GRPLQT
Trigger: GGTCTGCAGGGGTCTGCCTCATTCCTGCGACAGTCG...GGGAGGCACTGAGCCGGACTGTCCCCCAAGAGAGCTACTCGGGAGACCTCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR GCA 90 bp GAACAGAGGCGTGCGGGCTGGGCTTGGGTGAAGGGGTGGGCTTGGGATCGCGGCATTCCGAGGCCTAGCTaGTGTTGCGACTGTCGCAGG +
Preference number: 4 (lower is better)
Translates to: EQRRAGWAWVKGWAWDRGIPRPS*CCDCRR
Trigger: CCTGCGACAGTCGCAACAGCAGCTAGGCCTCGGAAT...GCCGCGATCCCAAGCCCACCCCTTCACCCAAGCCCAGCCCGCACGCCTCTGTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR GCA 90 bp CCTGGAGGTCTCCCGAGTAGCTCTCTTGGGGGACAGTCCGGCTCAGTGCCTCCCCGCCGTCCTCCTCACTaGTGCTGGACGTCACCTGGA +
Preference number: 4 (lower is better)
Translates to: PGGLPSSSLGGQSGSVPPRRPPH*CWTSPG
Trigger: TCCAGGTGACGTCCAGCAGCAGTGAGGAGGACGGCG...GGGAGGCACTGAGCCGGACTGTCCCCCAAGAGAGCTACTCGGGAGACCTCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR CCA 90 bp CCGAGGCCTAGCTGCTGTTGCGACTGTCGCAGGAATGAGGCAGACCCCTGCAGAGGGTGTCCAGGGAGCTaGGGGTCCCCTTCATGGCCG +
Preference number: 4 (lower is better)
Translates to: PRPSCCCDCRRNEADPCRGCPGS*GSPSWP
Trigger: CGGCCATGAAGGGGACCCCCAGCTCCCTGGACACCC...TCTGCAGGGGTCTGCCTCATTCCTGCGACAGTCGCAACAGCAGCTAGGCCTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521575.1
CDS-3UTR CCA 90 bp ATTCCGAGGCCTAGCTGCTGTTGCGACTGTCGCAGGAATGAGGCAGACCCCTGCCCCTGCCCTGCGGCTTaGGCTACCCGGCTCAGCGCT +
Preference number: 4 (lower is better)
Translates to: IPRPSCCCDCRRNEADPCPCPAA*ATRLSA
Trigger: AGCGCTGAGCCGGGTAGCCCAAGCCGCAGGGCAGGG...GCAGGGGTCTGCCTCATTCCTGCGACAGTCGCAACAGCAGCTAGGCCTCGGAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521575.1
CDS-3UTR CCA 90 bp CCTGGAGGTCTCCCGAGTAGCTCTCTTGGGGGACAGTCCGGCTCAGTGCCTCCCCATAGCCATGCTCCCTaGACTAGGAGCCGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: PGGLPSSSLGGQSGSVPPHSHAP*TRSRAL
Trigger: CAGCGCCCGGCTCCTAGTCCAGGGAGCATGGCTATG...GGGAGGCACTGAGCCGGACTGTCCCCCAAGAGAGCTACTCGGGAGACCTCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR CCA 90 bp TTTATTCGGACGCTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGGTCCGCCGTGACGCTGGGTGGGGCTaGTACGGGGATGGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: FIRTLGGAGTGMESLVRRDAGWG*YGDGVP
Trigger: AGGGACTCCATCCCCGTACCAGCCCCACCCAGCGTC...ACGGCGGACCAGGGACTCCATCCCCGTACCAGCCCCACCCAGCGTCCGAATAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR CCA 90 bp CCTGGAGGTCTCCCGAGTAGCTCTCTTGGGGGACAGTCCGGCTCAGTGCCTCCCGGCCAGTGTGAAGGGTaGGGGCGTGGCCAAAACCCA +
Preference number: 4 (lower is better)
Translates to: PGGLPSSSLGGQSGSVPPGQCEG*GRGQNP
Trigger: TGGGTTTTGGCCACGCCCCCACCCTTCACACTGGCC...GGGAGGCACTGAGCCGGACTGTCCCCCAAGAGAGCTACTCGGGAGACCTCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR TCA 90 bp GCCCTGGGCTTTATTCGGACGCTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGTGGGAGGAGGAACGGTaGTGTCATGCCTTCCGGGCT +
Preference number: 4 (lower is better)
Translates to: ALGFIRTLGGAGTGMESLWEEER*CHAFRA
Trigger: AGCCCGGAAGGCATGACATCACCGTTCCTCCTCCCA...CAGGGACTCCATCCCCGTACCAGCCCCACCCAGCGTCCGAATAAAGCCCAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR GCA 90 bp GGCTGTCTCGCCCCGCCCTGGGCTTTATTCGGACGCTGGGTGGGGCTGGTACGGCAGATATTCATGGGCTaGGGCCACGGAGAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: GCLAPPWALFGRWVGLVRQIFMG*GHGEFQ
Trigger: CTGGAACTCTCCGTGGCCGCAGCCCATGAATATCTG...CCGTACCAGCCCCACCCAGCGTCCGAATAAAGCCCAGGGCGGGGCGAGACAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR GCA 90 bp TCTGGCTGTCTCGCCCCGCCCTGGGCTTTATTCGGACGCTGGGTGGGGCTGGTAAATGAGGCAGACCCCTaGAGACCCCGTCCACACAGG +
Preference number: 4 (lower is better)
Translates to: SGCLAPPWALFGRWVGLVNEADP*RPRPHR
Trigger: CCTGTGTGGACGGGGTCTGCAGGGGTCTGCCTCATT...TACCAGCCCCACCCAGCGTCCGAATAAAGCCCAGGGCGGGGCGAGACAGCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR GCA 90 bp CTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGGTCCGCCGTCCTCCTCACTGCAGGCCTAGCTGCTGTTaGGACTGTCGCAGGAATGAG +
Preference number: 4 (lower is better)
Translates to: LGGAGTGMESLVRRPPHCRPSCC*DCRRNE
Trigger: CTCATTCCTGCGACAGTCGCAACAGCAGCTAGGCCT...GCAGTGAGGAGGACGGCGGACCAGGGACTCCATCCCCGTACCAGCCCCACCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR GCA 90 bp CCCGGGAAAAGCTCTGGCTGTCTCGCCCCGCCCTGGGCTTTATTCGGACGCTGGCGTCCTCCTCACTGCTaGTGGACGTCACCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: PGKSSGCLAPPWALFGRWRPPHC*WTSPGG
Trigger: ACCTCCAGGTGACGTCCAGCAGCAGTGAGGAGGACG...CCAGCGTCCGAATAAAGCCCAGGGCGGGGCGAGACAGCCAGAGCTTTTCCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR GCA 90 bp CTGCCGTCTGGGGCTGGGCCCGCGCTGCCGTCTAGTCGCCGCGCCTCCTGCTGCCTCATTGTCATGAATTaGGTCATCGTGCTCAACGTG +
Preference number: 4 (lower is better)
Translates to: LPSGAGPALPSSRRASCCLIVMN*VIVLNV
Trigger: CACGTTGAGCACGATGACGCAATTCATGACAATGAG...GCAGCAGGAGGCGCGGCGACTAGACGGCAGCGCGGGCCCAGCCCCAGACGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521575.1
CDS-3UTR CCA 90 bp AGTGGCCTACGACGCCAACGTGCTCGTCTACGAGGGCGGCTCCGTGACGTGGCTTGGGGGTCCCCTTCATaGCCGCCACAAGTGGTAGGA +
Preference number: 4 (lower is better)
Translates to: SGLRRQRARLRGRLRDVAWGSPS*PPQVVG
Trigger: TCCTACCACTTGTGGCGGCCATGAAGGGGACCCCCA...AGCCACGTCACGGAGCCGCCCTCGTAGACGAGCACGTTGGCGTCGTAGGCCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR CCA 90 bp GACGCTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGGTCCGCCGTCCTCCTCATGCTCCAGATATTCATaGGCTGCGGCCACGGAGAGT +
Preference number: 4 (lower is better)
Translates to: DAGWGWYGDGVPGPPSSSCSRYS*AAATES
Trigger: ACTCTCCGTGGCCGCAGCCCATGAATATCTGGAGCA...TGAGGAGGACGGCGGACCAGGGACTCCATCCCCGTACCAGCCCCACCCAGCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR CCA 90 bp CTGGCTGTCTCGCCCCGCCCTGGGCTTTATTCGGACGCTGGGTGGGGCTGGTACCATCTTCGGTTCGGGTaGCTCCAGGGACTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: LAVSPRPGLYSDAGWGWYHLRFG*LQGLQL
Trigger: GAGCTGAAGTCCCTGGAGCCACCCGAACCGAAGATG...GTACCAGCCCCACCCAGCGTCCGAATAAAGCCCAGGGCGGGGCGAGACAGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR CCA 90 bp CTCCCTCCAGCCGGCGGCCAGAAATGCACGGTCTCCATCAACGTCCTGCTCGCCCCTCCTCACTGCTGCTaGACGTCACCTGGAGGTCTC +
Preference number: 4 (lower is better)
Translates to: LPPAGGQKCTVSINVLLAPPHCC*TSPGGL
Trigger: GAGACCTCCAGGTGACGTCCAGCAGCAGTGAGGAGG...GGCGAGCAGGACGTTGATGGAGACCGTGCATTTCTGGCCGCCGGCTGGAGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR CCA 90 bp CCCGGGAAAAGCTCTGGCTGTCTCGCCCCGCCCTGGGCTTTATTCGGACGCTGGCCTCCTCACTGCTGCTaGACGTCACCTGGAGGTCTC +
Preference number: 4 (lower is better)
Translates to: PGKSSGCLAPPWALFGRWPPHCC*TSPGGL
Trigger: GAGACCTCCAGGTGACGTCCAGCAGCAGTGAGGAGG...CCAGCGTCCGAATAAAGCCCAGGGCGGGGCGAGACAGCCAGAGCTTTTCCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR CCA 90 bp CCACGGTGGGCTTGCCCCGGACCAACGACACTGGAGGATGACTTCCACAACTGGCGGGGATGGAGTCCCTaGTCCGCCGTCCTCCTCACT +
Preference number: 4 (lower is better)
Translates to: PRWACPGPTTLEDDFHNWRGWSP*SAVLLT
Trigger: AGTGAGGAGGACGGCGGACCAGGGACTCCATCCCCG...CCAGTTGTGGAAGTCATCCTCCAGTGTCGTTGGTCCGGGGCAAGCCCACCGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR CCA 90 bp CTGGAGGTCTCCCGAGTAGCTCTCTTGGGGGACAGTCCGGCTCAGTGCCTCCCTTGTCTCGCCCCGCCCTaGGCTTTATTCGGACGCTGG +
Preference number: 4 (lower is better)
Translates to: LEVSRVALLGDSPAQCLPCLAPP*ALFGRW
Trigger: CCAGCGTCCGAATAAAGCCCAGGGCGGGGCGAGACA...AGGGAGGCACTGAGCCGGACTGTCCCCCAAGAGAGCTACTCGGGAGACCTCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR CCA 90 bp ATGGCCAGTTCGGAGTGGCCTACGACGCCAACGTGCTCGTCTACGAGGGCGGCTGCGCAGGGTAAGCAGTaGCCCCGAACCTACCCCCAA +
Preference number: 4 (lower is better)
Translates to: MASSEWPTTPTCSSTRAAAQGKQ*PRTYPQ
Trigger: TTGGGGGTAGGTTCGGGGCCACTGCTTACCCTGCGC...AGCCGCCCTCGTAGACGAGCACGTTGGCGTCGTAGGCCACTCCGAACTGGCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR CCA 90 bp ATGGCCAGTTCGGAGTGGCCTACGACGCCAACGTGCTCGTCTACGAGGGCGGCTGCAGAGAACGGCGAGTaGGCCATCGACTTCTGCCCG +
Preference number: 4 (lower is better)
Translates to: MASSEWPTTPTCSSTRAAAENGE*AIDFCP
Trigger: CGGGCAGAAGTCGATGGCCCACTCGCCGTTCTCTGC...AGCCGCCCTCGTAGACGAGCACGTTGGCGTCGTAGGCCACTCCGAACTGGCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR CCA 90 bp TGGGCTTGGGTGAAGGGGTGGGCTTGGGATCGCGGCCCCGCTAGATCCCAGCTTGCAGCGTCTGCGCAGTaGAGGTCACCTACTTCCCCT +
Preference number: 4 (lower is better)
Translates to: WAWVKGWAWDRGPARSQLAASAQ*RSPTSP
Trigger: AGGGGAAGTAGGTGACCTCCACTGCGCAGACGCTGC...AAGCTGGGATCTAGCGGGGCCGCGATCCCAAGCCCACCCCTTCACCCAAGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR CCA 90 bp CCCGGGAAAAGCTCTGGCTGTCTCGCCCCGCCCTGGGCTTTATTCGGACGCTGGATGGCCAGTTCGGAGTaGCCTACGACGCCAACGTGC +
Preference number: 4 (lower is better)
Translates to: PGKSSGCLAPPWALFGRWMASSE*PTTPTC
Trigger: GCACGTTGGCGTCGTAGGCCACTCCGAACTGGCCAT...CCAGCGTCCGAATAAAGCCCAGGGCGGGGCGAGACAGCCAGAGCTTTTCCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR CCA 90 bp CTGGAGGTCTCCCGAGTAGCTCTCTTGGGGGACAGTCCGGCTCAGTGCCTCCCTGGTGCGGGCTGGACTTaGTTGGGGAAGGGGGTACTC +
Preference number: 4 (lower is better)
Translates to: LEVSRVALLGDSPAQCLPGAGWT*LGKGVL
Trigger: GAGTACCCCCTTCCCCAACCAAGTCCAGCCCGCACC...AGGGAGGCACTGAGCCGGACTGTCCCCCAAGAGAGCTACTCGGGAGACCTCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR CCA 90 bp CTGGCTGTCTCGCCCCGCCCTGGGCTTTATTCGGACGCTGGGTGGGGCTGGTACCCACCTCTAACAAGGTaGTGCCGAAGCTCACGAGGC +
Preference number: 4 (lower is better)
Translates to: LAVSPRPGLYSDAGWGWYPPLTR*CRSSRG
Trigger: GCCTCGTGAGCTTCGGCACCACCTTGTTAGAGGTGG...GTACCAGCCCCACCCAGCGTCCGAATAAAGCCCAGGGCGGGGCGAGACAGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521575.1
CDS-3UTR TCA 90 bp CCTGGAGGTCTCCCGAGTAGCTCTCTTGGGGGACAGTCCGGCTCAGTGCCTCCCAGAGGCCTATACTGGTaGAGCCCCTGCCTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: PGGLPSSSLGGQSGSVPPRGLYW*SPCLLR
Trigger: TCTGAGCAGGCAGGGGCTTCACCAGTATAGGCCTCT...GGGAGGCACTGAGCCGGACTGTCCCCCAAGAGAGCTACTCGGGAGACCTCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR GCA 90 bp TCCCGAGTAGCTCTCTTGGGGGACAGTCCGGCTCAGTGCCTCCCTAGCCCCGCCCAGATATTCATGGGCTaGGGCCACGGAGAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: SRVALLGDSPAQCLPSPAQIFMG*GHGEFQ
Trigger: CTGGAACTCTCCGTGGCCGCAGCCCATGAATATCTG...GGCGGGGCTAGGGAGGCACTGAGCCGGACTGTCCCCCAAGAGAGCTACTCGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR GCA 90 bp TTCCTGCCGGCGCAGGGTAAGCAGTGGCCCCGAACCTACCCCCAAACCCGGGCTTCTCTAACAAGGTGGTaGCGAAGCTCACGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: FLPAQGKQWPRTYPQTRASLTRW*RSSRGW
Trigger: CCAGCCTCGTGAGCTTCGGCACCACCTTGTTAGAGA...AGCCCGGGTTTGGGGGTAGGTTCGGGGCCACTGCTTACCCTGCGCCGGCAGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR GCA 90 bp GTAGCTCTCTTGGGGGACAGTCCGGCTCAGTGCCTCCCTAGCCCCGCCGCCTCTAGGCCTAGCTGCTGTTaGGACTGTCGCAGGAATGAG +
Preference number: 4 (lower is better)
Translates to: VALLGDSPAQCLPSPAASRPSCC*DCRRNE
Trigger: CTCATTCCTGCGACAGTCGCAACAGCAGCTAGGCCT...AGAGGCGGCGGGGCTAGGGAGGCACTGAGCCGGACTGTCCCCCAAGAGAGCTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR GCA 90 bp GCCCTGGGCTTTATTCGGACGCTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGATTCCGAGGCCTAGCTaGTGTTGCGACTGTCGCAGG +
Preference number: 4 (lower is better)
Translates to: ALGFIRTLGGAGTGMESLIPRPS*CCDCRR
Trigger: CCTGCGACAGTCGCAACAGCAGCTAGGCCTCGGAAT...CAGGGACTCCATCCCCGTACCAGCCCCACCCAGCGTCCGAATAAAGCCCAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR GCA 90 bp CGCCGTCCTCCTCACTGCTGCTGGACGTCACCTGGAGGTCTCCCGAGTAGCTCTCGTCCTCCTCACTGCTaGTGGACGTCACCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: RRPPHCCWTSPGGLPSSSRPPHC*WTSPGG
Trigger: ACCTCCAGGTGACGTCCAGCAGCAGTGAGGAGGACG...AGAGCTACTCGGGAGACCTCCAGGTGACGTCCAGCAGCAGTGAGGAGGACGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR GCA 90 bp CGCCGTCCTCCTCACTGCTGCTGGACGTCACCTGGAGGTCTCCCGAGTAGCTCTTCATCGTGCCCTGTGTaGTCATCTCGGGCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: RRPPHCCWTSPGGLPSSSSSCPV*SSRAWC
Trigger: GCACCAGGCCCGAGATGAGCACACAGGGCACGATGA...AGAGCTACTCGGGAGACCTCCAGGTGACGTCCAGCAGCAGTGAGGAGGACGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR CCA 90 bp AAAAGCTCTGGCTGTCTCGCCCCGCCCTGGGCTTTATTCGGACGCTGGGTGGGGGGAGGGCCACCTCGGTaGAGCTGTGGAAGTGGTAGA +
Preference number: 4 (lower is better)
Translates to: KSSGCLAPPWALFGRWVGGGPPR*SCGSGR
Trigger: TCTACCACTTCCACAGCTCCACCGAGGTGGCCCTCC...CCCCACCCAGCGTCCGAATAAAGCCCAGGGCGGGGCGAGACAGCCAGAGCTTTT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR CCA 90 bp TCTGGCTGTCTCGCCCCGCCCTGGGCTTTATTCGGACGCTGGGTGGGGCTGGTACATCTTCGGTTCGGGTaGCTCCAGGGACTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: SGCLAPPWALFGRWVGLVHLRFG*LQGLQL
Trigger: GAGCTGAAGTCCCTGGAGCCACCCGAACCGAAGATG...TACCAGCCCCACCCAGCGTCCGAATAAAGCCCAGGGCGGGGCGAGACAGCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR CCA 90 bp CCCTGGGCTTTATTCGGACGCTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGGTCACGAGGCTGGCTGTaGCTTCTCTCAACACCAGCC +
Preference number: 4 (lower is better)
Translates to: PWALFGRWVGLVRGWSPWSRGWL*LLSTPA
Trigger: GGCTGGTGTTGAGAGAAGCCACAGCCAGCCTCGTGA...CCAGGGACTCCATCCCCGTACCAGCCCCACCCAGCGTCCGAATAAAGCCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR CCA 90 bp CGCCCTGGGCTTTATTCGGACGCTGGGTGGGGCTGGTACGGGGATGGAGTCCCTTCACGAGGCTGGCTGTaGCTTCTCTCAACACCAGCC +
Preference number: 4 (lower is better)
Translates to: RPGLYSDAGWGWYGDGVPSRGWL*LLSTPA
Trigger: GGCTGGTGTTGAGAGAAGCCACAGCCAGCCTCGTGA...AGGGACTCCATCCCCGTACCAGCCCCACCCAGCGTCCGAATAAAGCCCAGGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR TCA 90 bp TCTGGCTGTCTCGCCCCGCCCTGGGCTTTATTCGGACGCTGGGTGGGGCTGGTAGCCTCAAGGTCACCCTaGCGAATCTCATCTCACTGG +
Preference number: 4 (lower is better)
Translates to: SGCLAPPWALFGRWVGLVASRSP*RISSHW
Trigger: CCAGTGAGATGAGATTCGTCAGGGTGACCTTGAGGC...TACCAGCCCCACCCAGCGTCCGAATAAAGCCCAGGGCGGGGCGAGACAGCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR TCA 90 bp CTGGCTGTCTCGCCCCGCCCTGGGCTTTATTCGGACGCTGGGTGGGGCTGGTACCCTCTTCATTGCCAATaGCCCTTCCTTCTTGACCCC +
Preference number: 4 (lower is better)
Translates to: LAVSPRPGLYSDAGWGWYPLHCQ*PFLLDP
Trigger: GGGGTCAAGAAGGAAGGGTCATTGGCAATGAAGAGG...GTACCAGCCCCACCCAGCGTCCGAATAAAGCCCAGGGCGGGGCGAGACAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR TCA 90 bp CTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGGTCCGCCGTCCTCCTCACTGCCCACGCTCATTGTCATaGATTGCGTCATCGTGCTCA +
Preference number: 4 (lower is better)
Translates to: LGGAGTGMESLVRRPPHCPRSLS*IASSCS
Trigger: TGAGCACGATGACGCAATTCATGACAATGAGCGTGG...GCAGTGAGGAGGACGGCGGACCAGGGACTCCATCCCCGTACCAGCCCCACCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521575.1
CDS-3UTR GCA 90 bp CGCCGTCCTCCTCACTGCTGCTGGACGTCACCTGGAGGTCTCCCGAGTAGCTCTGGAACGGTGATGTCATaGCTTCCGGGCTCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: RRPPHCCWTSPGGLPSSSGTVMS*LPGSSG
Trigger: ACCTGAGGAGCCCGGAAGGCATGACATCACCGTTCC...AGAGCTACTCGGGAGACCTCCAGGTGACGTCCAGCAGCAGTGAGGAGGACGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR GCA 90 bp CCCTGGGCTTTATTCGGACGCTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGGGGTGAAGCCCCTGCCTaGTCAGAAAAACCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: PWALFGRWVGLVRGWSPWGEAPA*SEKPAS
Trigger: AGAAGCGGGTTTTTCTGAGCAGGCAGGGGCTTCACC...CCAGGGACTCCATCCCCGTACCAGCCCCACCCAGCGTCCGAATAAAGCCCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR CCA 90 bp ACCGGTTCTCCGGGGATTCCGAGGCCTAGCTGCTGTTGCGACTGTCGCAGGAATTGTCTCGCCCCGCCCTaGGCTTTATTCGGACGCTGG +
Preference number: 4 (lower is better)
Translates to: TGSPGIPRPSCCCDCRRNCLAPP*ALFGRW
Trigger: CCAGCGTCCGAATAAAGCCCAGGGCGGGGCGAGACA...ATTCCTGCGACAGTCGCAACAGCAGCTAGGCCTCGGAATCCCCGGAGAACCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521575.1
CDS-3UTR CCA 90 bp CTGGCTGTCTCGCCCCGCCCTGGGCTTTATTCGGACGCTGGGTGGGGCTGGTACTCGCTTATTTTCCGGTaGGAAGAGCTACTCCGAGGC +
Preference number: 4 (lower is better)
Translates to: LAVSPRPGLYSDAGWGWYSLIFR*EELLRG
Trigger: GCCTCGGAGTAGCTCTTCCCACCGGAAAATAAGCGA...GTACCAGCCCCACCCAGCGTCCGAATAAAGCCCAGGGCGGGGCGAGACAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR TCA 90 bp TCACCTGGAGGTCTCCCGAGTAGCTCTCTTGGGGGACAGTCCGGCTCAGTGCCTGTGCTGGAAAACAAGTaGGAACCGGGCCAGACGCCA +
Preference number: 4 (lower is better)
Translates to: SPGGLPSSSLGGQSGSVPVLENK*EPGQTP
Trigger: TGGCGTCTGGCCCGGTTCTCACTTGTTTTCCAGCAC...AGGCACTGAGCCGGACTGTCCCCCAAGAGAGCTACTCGGGAGACCTCCAGGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR GCA 90 bp CAGACCCCTGCAGACCCCGTCCACACAGGCATAGCCATGCTCCCTGGACTAGGAGGAACGGTGATGTCATaGCTTCCGGGCTCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: QTPADPVHTGIAMLPGLGGTVMS*LPGSSG
Trigger: ACCTGAGGAGCCCGGAAGGCATGACATCACCGTTCC...TCCTAGTCCAGGGAGCATGGCTATGCCTGTGTGGACGGGGTCTGCAGGGGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521575.1
CDS-3UTR GCA 90 bp AAAAGCTCTGGCTGTCTCGCCCCGCCCTGGGCTTTATTCGGACGCTGGGTGGGGTCTCCATCAACGTCCTaGTCGCCCAGACCGTCTTCT +
Preference number: 4 (lower is better)
Translates to: KSSGCLAPPWALFGRWVGSPSTS*SPRPSS
Trigger: AGAAGACGGTCTGGGCGAGCAGGACGTTGATGGAGA...CCCCACCCAGCGTCCGAATAAAGCCCAGGGCGGGGCGAGACAGCCAGAGCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR GCA 90 bp AAAAAGCTCGGTTTCCCCGAGCCCACAGTATTGATGGCCAGTTCGGAGTGGCCTTGGGCCATCGACTTCTaGCCGGGGGTGATCCGCCGC +
Preference number: 4 (lower is better)
Translates to: KKLGFPEPTVLMASSEWPWAIDF*PGVIRR
Trigger: GCGGCGGATCACCCCCGGGCAGAAGTCGATGGCCCA...AGGCCACTCCGAACTGGCCATCAATACTGTGGGCTCGGGGAAACCGAGCTTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR GCA 90 bp TGGGCTTGGGTGAAGGGGTGGGCTTGGGATCGCGGCCCCGCTAGATCCCAGCTTTTTTCTGTCCGTAATTaGCCCCATCCTGACGGCCCA +
Preference number: 4 (lower is better)
Translates to: WAWVKGWAWDRGPARSQLFSVRN*PHPDGP
Trigger: TGGGCCGTCAGGATGGGGGCAATTACGGACAGAAAA...AAGCTGGGATCTAGCGGGGCCGCGATCCCAAGCCCACCCCTTCACCCAAGCCCA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR CCA 90 bp CAGAACTGTTCGCTTATTTTCCGGTGGGAAGAGCTACTCCGAGGCCCGGACGATGGCGGCTCCGTGACGTaGCTGCCTCCGGCCATCTAC +
Preference number: 4 (lower is better)
Translates to: QNCSLIFRWEELLRGPDDGGSVT*LPPAIY
Trigger: GTAGATGGCCGGAGGCAGCCACGTCACGGAGCCGCC...ATCGTCCGGGCCTCGGAGTAGCTCTTCCCACCGGAAAATAAGCGAACAGTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR GCA 90 bp CTCCCTCCAGCCGGCGGCCAGAAATGCACGGTCTCCATCAACGTCCTGCTCGCCGGTGGAGTTCACTTTTaGCGTAGACAACGACGGCAA +
Preference number: 4 (lower is better)
Translates to: LPPAGGQKCTVSINVLLAGGVHF*RRQRRQ
Trigger: TTGCCGTCGTTGTCTACGGCAAAAGTGAACTCCACC...GGCGAGCAGGACGTTGATGGAGACCGTGCATTTCTGGCCGCCGGCTGGAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR GCA 90 bp CCCGGGAAAAGCTCTGGCTGTCTCGCCCCGCCCTGGGCTTTATTCGGACGCTGGCTCTCAGACGTACAATaGCGAAGAGGTGGAGTTCAC +
Preference number: 4 (lower is better)
Translates to: PGKSSGCLAPPWALFGRWLSDVQ*RRGGVH
Trigger: GTGAACTCCACCTCTTCGGCATTGTACGTCTGAGAG...CCAGCGTCCGAATAAAGCCCAGGGCGGGGCGAGACAGCCAGAGCTTTTCCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR GCA 90 bp ACCGGTTCTCCGGGGATTCCGAGGCCTAGCTGCTGTTGCGACTGTCGCAGGAATCCTCTAACAAGGTGGTaGCGAAGCTCACGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: TGSPGIPRPSCCCDCRRNPLTRW*RSSRGW
Trigger: CCAGCCTCGTGAGCTTCGGCACCACCTTGTTAGAGG...ATTCCTGCGACAGTCGCAACAGCAGCTAGGCCTCGGAATCCCCGGAGAACCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521575.1
CDS-3UTR CCA 90 bp ACACAGAGGCCTATACTGGTGAAGCCCCTGCCTGCTCAGAAAAACCCGCTTCTAGACAGAAGCGGGGGCTaGAGGGCCACCTCGGTGGAG +
Preference number: 4 (lower is better)
Translates to: TQRPILVKPLPAQKNPLLDRSGG*RATSVE
Trigger: CTCCACCGAGGTGGCCCTCCAGCCCCCGCTTCTGTC...TAGAAGCGGGTTTTTCTGAGCAGGCAGGGGCTTCACCAGTATAGGCCTCTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR CCA 90 bp CCACGGTGGGCTTGCCCCGGACCAACGACACTGGAGGATGACTTCCACAACTGGCGAAGCTCACGAGGCTaGCTGTGGCTTCTCTCAACA +
Preference number: 4 (lower is better)
Translates to: PRWACPGPTTLEDDFHNWRSSRG*LWLLST
Trigger: TGTTGAGAGAAGCCACAGCCAGCCTCGTGAGCTTCG...CCAGTTGTGGAAGTCATCCTCCAGTGTCGTTGGTCCGGGGCAAGCCCACCGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR CCA 90 bp TCACCTGGAGGTCTCCCGAGTAGCTCTCTTGGGGGACAGTCCGGCTCAGTGCCTCGAAGCTCACGAGGCTaGCTGTGGCTTCTCTCAACA +
Preference number: 4 (lower is better)
Translates to: SPGGLPSSSLGGQSGSVPRSSRG*LWLLST
Trigger: TGTTGAGAGAAGCCACAGCCAGCCTCGTGAGCTTCG...AGGCACTGAGCCGGACTGTCCCCCAAGAGAGCTACTCGGGAGACCTCCAGGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR CCA 90 bp ACACAGAGGCCTATACTGGTGAAGCCCCTGCCTGCTCAGAAAAACCCGCTTCTAGGGCTGGTACGGGGATaGAGTCCCTGGTCCGCCGTC +
Preference number: 4 (lower is better)
Translates to: TQRPILVKPLPAQKNPLLGLVRG*SPWSAV
Trigger: GACGGCGGACCAGGGACTCCATCCCCGTACCAGCCC...TAGAAGCGGGTTTTTCTGAGCAGGCAGGGGCTTCACCAGTATAGGCCTCTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR CCA 90 bp ATGGCCAGTTCGGAGTGGCCTACGACGCCAACGTGCTCGTCTACGAGGGCGGCTCCGGACCAACGACACTaGAGGATGACTTCCACAACT +
Preference number: 4 (lower is better)
Translates to: MASSEWPTTPTCSSTRAAPDQRH*RMTSTT
Trigger: AGTTGTGGAAGTCATCCTCCAGTGTCGTTGGTCCGG...AGCCGCCCTCGTAGACGAGCACGTTGGCGTCGTAGGCCACTCCGAACTGGCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR CAA 72 bp CAGGGCACGCGGCCTTCCATCCCCCACCCCTTAGGATaGGCAGGATTACCGACTCAACTACAGCAAGGACGA +
Preference number: 4 (lower is better)
Translates to: QGTRPSIPHPLG*AGLPTQLQQGR
Trigger: TCGTCCTTGCTGTAGTTGAGTCGGTAATCCTGCCAATCCTAAGGGGTGGGGGATGGAAGGCCGCGTGCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR TCA 90 bp ACACAGAGGCCTATACTGGTGAAGCCCCTGCCTGCTCAGAAAAACCCGCTTCTAACTCACCCCGTGTCCTaGGCTCACCGGTTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: TQRPILVKPLPAQKNPLLTHPVS*AHRFSG
Trigger: CCCGGAGAACCGGTGAGCTCAGGACACGGGGTGAGT...TAGAAGCGGGTTTTTCTGAGCAGGCAGGGGCTTCACCAGTATAGGCCTCTGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR TCA 90 bp CCCTGGGCTTTATTCGGACGCTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGGTCTGGATTGGAATCGTaGGTCAAATCTGGGGAATGG +
Preference number: 4 (lower is better)
Translates to: PWALFGRWVGLVRGWSPWSGLES*VKSGEW
Trigger: CCATTCCCCAGATTTGACTCACGATTCCAATCCAGA...CCAGGGACTCCATCCCCGTACCAGCCCCACCCAGCGTCCGAATAAAGCCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR TCA 90 bp TCTGGCTGTCTCGCCCCGCCCTGGGCTTTATTCGGACGCTGGGTGGGGCTGGTACTCCCATCTGCAGAATaGAAAAGAGGAGACTCTCAC +
Preference number: 4 (lower is better)
Translates to: SGCLAPPWALFGRWVGLVLPSAE*KRGDSH
Trigger: GTGAGAGTCTCCTCTTTTTCATTCTGCAGATGGGAG...TACCAGCCCCACCCAGCGTCCGAATAAAGCCCAGGGCGGGGCGAGACAGCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR TCA 90 bp CCACGGTGGGCTTGCCCCGGACCAACGACACTGGAGGATGACTTCCACAACTGGTCTCTTCAACAACTATaGCCCAGGAAGCCGGCCAGT +
Preference number: 4 (lower is better)
Translates to: PRWACPGPTTLEDDFHNWSLQQL*PRKPAS
Trigger: ACTGGCCGGCTTCCTGGGTCATAGTTGTTGAAGAGA...CCAGTTGTGGAAGTCATCCTCCAGTGTCGTTGGTCCGGGGCAAGCCCACCGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR CCA 90 bp CCCTGGGCTTTATTCGGACGCTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGGTCCTTATTTTCGTCATaGTGGTCGCCACGCTCATTG +
Preference number: 4 (lower is better)
Translates to: PWALFGRWVGLVRGWSPWSLFSS*WSPRSL
Trigger: CAATGAGCGTGGCGACCACCATGACGAAAATAAGGA...CCAGGGACTCCATCCCCGTACCAGCCCCACCCAGCGTCCGAATAAAGCCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR CCA 90 bp CCACGGTGGGCTTGCCCCGGACCAACGACACTGGAGGATGACTTCCACAACTGGCCTTCAGAACTCGTGTaGCTGCCAGAGATTGTGCTG +
Preference number: 4 (lower is better)
Translates to: PRWACPGPTTLEDDFHNWPSELV*LPEIVL
Trigger: CAGCACAATCTCTGGCAGCCACACGAGTTCTGAAGG...CCAGTTGTGGAAGTCATCCTCCAGTGTCGTTGGTCCGGGGCAAGCCCACCGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR CCA 90 bp GAACAGAGGCGTGCGGGCTGGGCTTGGGTGAAGGGGTGGGCTTGGGATCGCGGCCAGGCACAGCATAATTaGTTTAGGAGACAGATACTG +
Preference number: 4 (lower is better)
Translates to: EQRRAGWAWVKGWAWDRGQAQHN*FRRQIL
Trigger: CAGTATCTGTCTCCTAAACCAATTATGCTGTGCCTG...GCCGCGATCCCAAGCCCACCCCTTCACCCAAGCCCAGCCCGCACGCCTCTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR TCA 90 bp CAGAACTGTTCGCTTATTTTCCGGTGGGAAGAGCTACTCCGAGGCCCGGACGATGCCAGTGCGGGAGCCTaGGGATACTGTCACCATCAG +
Preference number: 4 (lower is better)
Translates to: QNCSLIFRWEELLRGPDDASAGA*GYCHHQ
Trigger: CTGATGGTGACAGTATCCTCAGGCTCCCGCACTGGC...ATCGTCCGGGCCTCGGAGTAGCTCTTCCCACCGGAAAATAAGCGAACAGTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR GCA 90 bp ATGGCCAGTTCGGAGTGGCCTACGACGCCAACGTGCTCGTCTACGAGGGCGGCTAGCTCTCTGAACCTCTaGTCCAGATATTCATGGGCT +
Preference number: 4 (lower is better)
Translates to: MASSEWPTTPTCSSTRAASSLNL*SRYSWA
Trigger: AGCCCATGAATATCTGGAGCAGAGGTTCAGAGAGCT...AGCCGCCCTCGTAGACGAGCACGTTGGCGTCGTAGGCCACTCCGAACTGGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR GCA 90 bp TGGGCTTGGGTGAAGGGGTGGGCTTGGGATCGCGGCCCCGCTAGATCCCAGCTTCTTCTTGTTCCTCATTaGCCAGAAAATCCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: WAWVKGWAWDRGPARSQLLLVPH*PENPRD
Trigger: GTCTCTGGGATTTTCTGGGCAATGAGGAACAAGAAG...AAGCTGGGATCTAGCGGGGCCGCGATCCCAAGCCCACCCCTTCACCCAAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR GCA 90 bp AAAAAGCTCGGTTTCCCCGAGCCCACAGTATTGATGGCCAGTTCGGAGTGGCCTGCCGGCGGCCAGAAATaGACGGTCTCCATCAACGTC +
Preference number: 4 (lower is better)
Translates to: KKLGFPEPTVLMASSEWPAGGQK*TVSINV
Trigger: GACGTTGATGGAGACCGTGCATTTCTGGCCGCCGGC...AGGCCACTCCGAACTGGCCATCAATACTGTGGGCTCGGGGAAACCGAGCTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR GCA 90 bp CCACGGTGGGCTTGCCCCGGACCAACGACACTGGAGGATGACTTCCACAACTGGGGTACTCTGAGAGGGTaGAGACCTGTGCAAAAAGCT +
Preference number: 4 (lower is better)
Translates to: PRWACPGPTTLEDDFHNWGTLRG*RPVQKA
Trigger: AGCTTTTTGCACAGGTCTGCACCCTCTCAGAGTACC...CCAGTTGTGGAAGTCATCCTCCAGTGTCGTTGGTCCGGGGCAAGCCCACCGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR GCA 90 bp ACACAGAGGCCTATACTGGTGAAGCCCCTGCCTGCTCAGAAAAACCCGCTTCTACAGGAAGCCGGCCAGTaGGGGAGCCTGAGGATACTG +
Preference number: 4 (lower is better)
Translates to: TQRPILVKPLPAQKNPLLQEAGQ*GSLRIL
Trigger: CAGTATCCTCAGGCTCCCGCACTGGCCGGCTTCCTG...TAGAAGCGGGTTTTTCTGAGCAGGCAGGGGCTTCACCAGTATAGGCCTCTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR GCA 90 bp GCCCTGGGCTTTATTCGGACGCTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGGGAAGAACGAGGAACTaGGTCTTTATCACCATCTCT +
Preference number: 4 (lower is better)
Translates to: ALGFIRTLGGAGTGMESLGRTRN*VFITIS
Trigger: AGAGATGGTGATAAAGACGCAGTTCCTCGTTCTTCC...CAGGGACTCCATCCCCGTACCAGCCCCACCCAGCGTCCGAATAAAGCCCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR CCA 90 bp TCTGGCTGTCTCGCCCCGCCCTGGGCTTTATTCGGACGCTGGGTGGGGCTGGTATTATTTTCGTCATGGTaGTCGCCACGCTCATTGTCA +
Preference number: 4 (lower is better)
Translates to: SGCLAPPWALFGRWVGLVLFSSW*SPRSLS
Trigger: TGACAATGAGCGTGGCGACCACCATGACGAAAATAA...TACCAGCCCCACCCAGCGTCCGAATAAAGCCCAGGGCGGGGCGAGACAGCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR CCA 90 bp ACTGTTCGCTTATTTTCCGGTGGGAAGAGCTACTCCGAGGCCCGGACGATTATTGTGAAGGGGTGGGCTTaGGATCGCGGCCCCGCTAGA +
Preference number: 4 (lower is better)
Translates to: TVRLFSGGKSYSEARTIIVKGWA*DRGPAR
Trigger: TCTAGCGGGGCCGCGATCCCAAGCCCACCCCTTCAC...AATAATCGTCCGGGCCTCGGAGTAGCTCTTCCCACCGGAAAATAAGCGAACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR CCA 90 bp GAGGTGGAGTTCACTTTTGCCGTAGACAACGACGGCAAGACCATCAACAAGATCGCTTGGGTGAAGGGGTaGGCTTGGGATCGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: EVEFTFAVDNDGKTINKIAWVKG*AWDRGP
Trigger: GGGGCCGCGATCCCAAGCCCACCCCTTCACCCAAGC...GATCTTGTTGATGGTCTTGCCGTCGTTGTCTACGGCAAAAGTGAACTCCACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR CCA 90 bp GTCCTGCCTTCTGGCTTTCCATACCCTCAACGAGAATGCCCTTTTCTGTCCGTAGGCCGGAGGTACAGATaGGAACAGAGGCGTGCGGGC +
Preference number: 4 (lower is better)
Translates to: VLPSGFPYPQRECPFLSVGRRYR*EQRRAG
Trigger: GCCCGCACGCCTCTGTTCCCATCTGTACCTCCGGCC...TACGGACAGAAAAGGGCATTCTCGTTGAGGGTATGGAAAGCCAGAAGGCAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR CCA 90 bp TGGGCTTTATTCGGACGCTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGGTCCTGCCAGAGATTGTGCTaGAAAACAAGTGAGAACCGG +
Preference number: 4 (lower is better)
Translates to: WALFGRWVGLVRGWSPWSCQRLC*KTSENR
Trigger: CCGGTTCTCACTTGTTTTCCAGCACAATCTCTGGCA...GGACCAGGGACTCCATCCCCGTACCAGCCCCACCCAGCGTCCGAATAAAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381365.4
3UTR CAA 72 bp CTGTGCAAAAAGCTCGGTTTCCCCGAGCCCACAGTATaGATGGCCAGTTCGGAGTGGCCTACGACGCCAACG +
Preference number: 4 (lower is better)
Translates to: LCKKLGFPEPTV*MASSEWPTTPT
Trigger: CGTTGGCGTCGTAGGCCACTCCGAACTGGCCATCAATACTGTGGGCTCGGGGAAACCGAGCTTTTTGCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR TCA 90 bp ACTGGCTCTCCCTCCAGCCGGCGGCCAGAAATGCACGGTCTCCATCAACGTCCTAACGACACTGGAGGATaGCTTCCACAACTGGGTTTA +
Preference number: 4 (lower is better)
Translates to: TGSPSSRRPEMHGLHQRPNDTGG*LPQLGL
Trigger: TAAACCCAGTTGTGGAAGTCATCCTCCAGTGTCGTT...AGGACGTTGATGGAGACCGTGCATTTCTGGCCGCCGGCTGGAGGGAGAGCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR GCA 90 bp ACCCCTGTCCTGAAATCATTCTCGATTGTTACTCTAGTCCTGCCTTCTGGCTTTGACAGTCCGGCTCAGTaGCTCCCTAGCCCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: TPVLKSFSIVTLVLPSGFDSPAQ*LPSPAA
Trigger: GGCGGCGGGGCTAGGGAGGCACTGAGCCGGACTGTC...AAAGCCAGAAGGCAGGACTAGAGTAACAATCGAGAATGATTTCAGGACAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR GCA 90 bp CCCTGGGCTTTATTCGGACGCTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGGTACCCTCAACGAGAATaGCCTTTTCTGTCCGTAATT +
Preference number: 4 (lower is better)
Translates to: PWALFGRWVGLVRGWSPWYPQRE*PFLSVI
Trigger: AATTACGGACAGAAAAGGGCATTCTCGTTGAGGGTA...CCAGGGACTCCATCCCCGTACCAGCCCCACCCAGCGTCCGAATAAAGCCCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR TCA 90 bp CGCCGTCCTCCTCACTGCTGCTGGACGTCACCTGGAGGTCTCCCGAGTAGCTCTAGCTTACCCCTGTCCTaGAATCATTCTCGATTGTTA +
Preference number: 4 (lower is better)
Translates to: RRPPHCCWTSPGGLPSSSSLPLS*NHSRLL
Trigger: TAACAATCGAGAATGATTTCAGGACAGGGGTAAGCT...AGAGCTACTCGGGAGACCTCCAGGTGACGTCCAGCAGCAGTGAGGAGGACGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR GCA 90 bp ACACAGAGGCCTATACTGGTGAAGCCCCTGCCTGCTCAGAAAAACCCGCTTCTACAGAGGGGAGAGAGGTaGTCCAGCCTCTTCATTGCC +
Preference number: 4 (lower is better)
Translates to: TQRPILVKPLPAQKNPLLQRGER*SSLFIA
Trigger: GGCAATGAAGAGGCTGGAGCACCTCTCTCCCCTCTG...TAGAAGCGGGTTTTTCTGAGCAGGCAGGGGCTTCACCAGTATAGGCCTCTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR CCA 90 bp GACTTAGACACAGTATTTCGTTCCCAGGCACAGCATAATTGGTTTAGGAGACAGGCCAGGCGTAGGCACTaGGTGGGACGCTCCAGCGCG +
Preference number: 4 (lower is better)
Translates to: DLDTVFRSQAQHNWFRRQARRRH*VGRSSA
Trigger: CGCGCTGGAGCGTCCCACCCAGTGCCTACGCCTGGC...CTGTCTCCTAAACCAATTATGCTGTGCCTGGGAACGAAATACTGTGTCTAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR GCA 90 bp ATTGTTACTCTAGTCCTGCCTTCTGGCTTTCCATACCCTCAACGAGAATGCCCTCTTCCACGGTGGGCTTaGCCCGGACCAACGACACTG +
Preference number: 4 (lower is better)
Translates to: IVTLVLPSGFPYPQRECPLPRWA*PGPTTL
Trigger: CAGTGTCGTTGGTCCGGGGCAAGCCCACCGTGGAAG...AGGGCATTCTCGTTGAGGGTATGGAAAGCCAGAAGGCAGGACTAGAGTAACAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR GCA 90 bp GAAATCATTCTCGATTGTTACTCTAGTCCTGCCTTCTGGCTTTCCATACCCTCAGAAGCCGGCCTGGGGTaGGGGCTGGACTTGGTTGGG +
Preference number: 4 (lower is better)
Translates to: EIILDCYSSPAFWLSIPSEAGLG*GLDLVG
Trigger: CCCAACCAAGTCCAGCCCGCACCCCAGGCCGGCTTC...TGAGGGTATGGAAAGCCAGAAGGCAGGACTAGAGTAACAATCGAGAATGATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR CCA 90 bp GAGGTGGAGTTCACTTTTGCCGTAGACAACGACGGCAAGACCATCAACAAGATCCGGGCTGGACTTGGTTaGGGAAGGGGGTACTCTGAG +
Preference number: 4 (lower is better)
Translates to: EVEFTFAVDNDGKTINKIRAGLG*GRGYSE
Trigger: CTCAGAGTACCCCCTTCCCCAACCAAGTCCAGCCCG...GATCTTGTTGATGGTCTTGCCGTCGTTGTCTACGGCAAAAGTGAACTCCACCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR GCA 90 bp ACCCCTGTCCTGAAATCATTCTCGATTGTTACTCTAGTCCTGCCTTCTGGCTTTGCAGGCAGCATCCCCTaGATCTTCGGTTCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: TPVLKSFSIVTLVLPSGFAGSIP*IFGSGG
Trigger: GCCACCCGAACCGAAGATGCAGGGGATGCTGCCTGC...AAAGCCAGAAGGCAGGACTAGAGTAACAATCGAGAATGATTTCAGGACAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR GCA 90 bp ACCCCTGTCCTGAAATCATTCTCGATTGTTACTCTAGTCCTGCCTTCTGGCTTTCCTACGACGCCAACGTaGTCGTCTACGAGGGCGGCT +
Preference number: 4 (lower is better)
Translates to: TPVLKSFSIVTLVLPSGFPTTPT*SSTRAA
Trigger: AGCCGCCCTCGTAGACGAGCACGTTGGCGTCGTAGG...AAAGCCAGAAGGCAGGACTAGAGTAACAATCGAGAATGATTTCAGGACAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR TCA 90 bp GACTTAGACACAGTATTTCGTTCCCAGGCACAGCATAATTGGTTTAGGAGACAGGGGAAGGGGGTACTCTaGGAGGGTGCAGACCTGTGC +
Preference number: 4 (lower is better)
Translates to: DLDTVFRSQAQHNWFRRQGKGVL*EGADLC
Trigger: GCACAGGTCTGCACCCTCTCAGAGTACCCCCTTCCC...CTGTCTCCTAAACCAATTATGCTGTGCCTGGGAACGAAATACTGTGTCTAAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR TCA 90 bp AAAAAGCTCGGTTTCCCCGAGCCCACAGTATTGATGGCCAGTTCGGAGTGGCCTGCTCACTTCTGGCCCTaGAATCTCACTTCAATCATC +
Preference number: 4 (lower is better)
Translates to: KKLGFPEPTVLMASSEWPAHFWP*NLTSII
Trigger: GATGATTGAAGTGAGATTTCAGGGCCAGAAGTGAGC...AGGCCACTCCGAACTGGCCATCAATACTGTGGGCTCGGGGAAACCGAGCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR GCA 90 bp ACCCCTGTCCTGAAATCATTCTCGATTGTTACTCTAGTCCTGCCTTCTGGCTTTGAGGGTGCAGACCTGTaGAAAAAGCTCGGTTTCCCC +
Preference number: 4 (lower is better)
Translates to: TPVLKSFSIVTLVLPSGFEGADL*KKLGFP
Trigger: GGGGAAACCGAGCTTTTTGCACAGGTCTGCACCCTC...AAAGCCAGAAGGCAGGACTAGAGTAACAATCGAGAATGATTTCAGGACAGGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR CCA 90 bp ATTGTTACTCTAGTCCTGCCTTCTGGCTTTCCATACCCTCAACGAGAATGCCCTAGATCTCTAACAAGGTaGTGCCGAAGCTCACGAGGC +
Preference number: 4 (lower is better)
Translates to: IVTLVLPSGFPYPQRECPRSLTR*CRSSRG
Trigger: GCCTCGTGAGCTTCGGCACCACCTTGTTAGAGATCT...AGGGCATTCTCGTTGAGGGTATGGAAAGCCAGAAGGCAGGACTAGAGTAACAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR CCA 90 bp GACTTAGACACAGTATTTCGTTCCCAGGCACAGCATAATTGGTTTAGGAGACAGCAGCAAGGACGACTTTaGGGGTATAGAAACCCTGCG +
Preference number: 4 (lower is better)
Translates to: DLDTVFRSQAQHNWFRRQQQGRL*GYRNPA
Trigger: CGCAGGGTTTCTATACCCCCAAAGTCGTCCTTGCTG...CTGTCTCCTAAACCAATTATGCTGTGCCTGGGAACGAAATACTGTGTCTAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR GCA 90 bp GAAATCATTCTCGATTGTTACTCTAGTCCTGCCTTCTGGCTTTCCATACCCTCACAGAACTCGTGTGGCTaGCAGAGATTGTGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: EIILDCYSSPAFWLSIPSQNSCG*QRLCWK
Trigger: TTTCCAGCACAATCTCTGGCAGCCACACGAGTTCTG...TGAGGGTATGGAAAGCCAGAAGGCAGGACTAGAGTAACAATCGAGAATGATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR CCA 90 bp ACCCCTGTCCTGAAATCATTCTCGATTGTTACTCTAGTCCTGCCTTCTGGCTTTCTCACCACTAGCGTCTaGATTGGAATCGTGAGTCAA +
Preference number: 4 (lower is better)
Translates to: TPVLKSFSIVTLVLPSGFLTTSV*IGIVSQ
Trigger: TTGACTCACGATTCCAATCCAGACGCTAGTGGTGAG...AAAGCCAGAAGGCAGGACTAGAGTAACAATCGAGAATGATTTCAGGACAGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR CAA 90 bp CCCTGGGCTTTATTCGGACGCTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGGCCCCTGCCCTGCGGCTaGGGCTACCCGGCTCAGCGC +
Preference number: 5 (lower is better)
Translates to: PWALFGRWVGLVRGWSPWPLPCG*GYPAQR
Trigger: GCGCTGAGCCGGGTAGCCCAAGCCGCAGGGCAGGGG...CCAGGGACTCCATCCCCGTACCAGCCCCACCCAGCGTCCGAATAAAGCCCAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS GCA 90 bp CCGTCTGGGGCTGGGCCCGCGCTGCCGTCTAGTCGCCGCGCCTCCTaGTGCAGCCACAGGGCTGAGATCTCTAACAAGGTGGTGCCGAAG +
Preference number: 5 (lower is better)
Translates to: PSGAGPALPSSRRAS*CSHRAEISNKVVPK
Trigger: CTTCGGCACCACCTTGTTAGAGATCTCAGCCCTGTGGCTGCAGCAGGAGGCGCGGCGACTAGACGGCAGCGCGGGCCCAGCCCCAGACGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR CAA 90 bp GGCTGTCTCGCCCCGCCCTGGGCTTTATTCGGACGCTGGGTGGGGCTGGTACGGTCCCGAGTAGCTCTCTaGGGGGACAGTCCGGCTCAG +
Preference number: 5 (lower is better)
Translates to: GCLAPPWALFGRWVGLVRSRVAL*GDSPAQ
Trigger: CTGAGCCGGACTGTCCCCCAAGAGAGCTACTCGGGA...CCGTACCAGCCCCACCCAGCGTCCGAATAAAGCCCAGGGCGGGGCGAGACAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR CAA 90 bp TTCCTGCCGGCGCAGGGTAAGCAGTGGCCCCGAACCTACCCCCAAACCCGGGCTACTTCCACGGTGGGCTaGCCCCGGACCAACGACACT +
Preference number: 5 (lower is better)
Translates to: FLPAQGKQWPRTYPQTRATSTVG*PRTNDT
Trigger: AGTGTCGTTGGTCCGGGGCAAGCCCACCGTGGAAGT...AGCCCGGGTTTGGGGGTAGGTTCGGGGCCACTGCTTACCCTGCGCCGGCAGGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS TCA 90 bp CAGCTGGAGGGCGTAACCAGCCCGTACCAGGAGAAGCCGTGTTTGTaGGGTCAGCGCGCGGCGCCTTCGGTAGCTGGGAGGAGGAACGGT +
Preference number: 5 (lower is better)
Translates to: QLEGVTSPYQEKPCL*GQRAAPSVAGRRNG
Trigger: ACCGTTCCTCCTCCCAGCTACCGAAGGCGCCGCGCGCTGACCTCACAAACACGGCTTCTCCTGGTACGGGCTGGTTACGCCCTCCAGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR CAA 90 bp AAAAGCTCTGGCTGTCTCGCCCCGCCCTGGGCTTTATTCGGACGCTGGGTGGGGGGGTGCGGGCTGGACTaGGTTGGGGAAGGGGGTACT +
Preference number: 5 (lower is better)
Translates to: KSSGCLAPPWALFGRWVGGCGLD*VGEGGT
Trigger: AGTACCCCCTTCCCCAACCAAGTCCAGCCCGCACCC...CCCCACCCAGCGTCCGAATAAAGCCCAGGGCGGGGCGAGACAGCCAGAGCTTTT
66% GC, longest homopolymer 7 nt, total homopolymer stretches 24 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR CAA 90 bp CCCTGGGCTTTATTCGGACGCTGGGTGGGGCTGGTACGGGGATGGAGTCCCTGGGGGCTGAGATCTGCATaGGGGGCACAGGGGTTAGCG +
Preference number: 5 (lower is better)
Translates to: PWALFGRWVGLVRGWSPWGLRSA*GAQGLA
Trigger: CGCTAACCCCTGTGCCCCCAATGCAGATCTCAGCCC...CCAGGGACTCCATCCCCGTACCAGCCCCACCCAGCGTCCGAATAAAGCCCAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000521575.1
CDS-3UTR CAA 90 bp ACACAGAGGCCTATACTGGTGAAGCCCCTGCCTGCTCAGAAAAACCCGCTTCTACCCCTGCCCTGCGGCTaGGGCTACCCGGCTCAGCGC +
Preference number: 5 (lower is better)
Translates to: TQRPILVKPLPAQKNPLLPLPCG*GYPAQR
Trigger: GCGCTGAGCCGGGTAGCCCAAGCCGCAGGGCAGGGG...TAGAAGCGGGTTTTTCTGAGCAGGCAGGGGCTTCACCAGTATAGGCCTCTGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR CAA 90 bp TGGGCTTGGGTGAAGGGGTGGGCTTGGGATCGCGGCCCCGCTAGATCCCAGCTTAATGACCCTTCCTTCTaGACCCCATCGCAGGCAGGG +
Preference number: 5 (lower is better)
Translates to: WAWVKGWAWDRGPARSQLNDPSF*TPSQAG
Trigger: CCCTGCCTGCGATGGGGTCAAGAAGGAAGGGTCATT...AAGCTGGGATCTAGCGGGGCCGCGATCCCAAGCCCACCCCTTCACCCAAGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS CCA 90 bp CTGAGATCTCTAACAAGGTGGTGCCGAAGCTCACGAGGCTGGCTGTaGCTTCTCTCAACACCAGCCCCAGGGTGGGCTTCGGGGCAGGCA +
Preference number: 5 (lower is better)
Translates to: LRSLTRWCRSSRGWL*LLSTPAPGWASGQA
Trigger: TGCCTGCCCCGAAGCCCACCCTGGGGCTGGTGTTGAGAGAAGCCACAGCCAGCCTCGTGAGCTTCGGCACCACCTTGTTAGAGATCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS CCA 90 bp GGCTCCAGGGACTTCAGCTCTCTGAACCTCTGCTCCAGATATTCATaGGCTGCGGCCACGGAGAGTTCCAGGGAAGACAGAAGCGGGGGC +
Preference number: 5 (lower is better)
Translates to: GSRDFSSLNLCSRYS*AAATESSREDRSGG
Trigger: GCCCCCGCTTCTGTCTTCCCTGGAACTCTCCGTGGCCGCAGCCCATGAATATCTGGAGCAGAGGTTCAGAGAGCTGAAGTCCCTGGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS CCA 90 bp GGTGGGCTTCGGGGCAGGCAGCATCCCCTGCATCTTCGGTTCGGGTaGCTCCAGGGACTTCAGCTCTCTGAACCTCTGCTCCAGATATTC +
Preference number: 5 (lower is better)
Translates to: GGLRGRQHPLHLRFG*LQGLQLSEPLLQIF
Trigger: GAATATCTGGAGCAGAGGTTCAGAGAGCTGAAGTCCCTGGAGCCACCCGAACCGAAGATGCAGGGGATGCTGCCTGCCCCGAAGCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR CAA 90 bp CTGGAGGTCTCCCGAGTAGCTCTCTTGGGGGACAGTCCGGCTCAGTGCCTCCCTGAATGGTGTGAGGTCTaGTCCAGGGCACCCCTTTTC +
Preference number: 5 (lower is better)
Translates to: LEVSRVALLGDSPAQCLPEWCEV*SRAPLF
Trigger: GAAAAGGGGTGCCCTGGACAAGACCTCACACCATTC...AGGGAGGCACTGAGCCGGACTGTCCCCCAAGAGAGCTACTCGGGAGACCTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR CAA 90 bp GGCTGTCTCGCCCCGCCCTGGGCTTTATTCGGACGCTGGGTGGGGCTGGTACGGGCTCATTGTCATGAATaGCGTCATCGTGCTCAACGT +
Preference number: 5 (lower is better)
Translates to: GCLAPPWALFGRWVGLVRAHCHE*RHRAQR
Trigger: ACGTTGAGCACGATGACGCAATTCATGACAATGAGC...CCGTACCAGCCCCACCCAGCGTCCGAATAAAGCCCAGGGCGGGGCGAGACAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521575.1
CDS TCA 90 bp GTGAGGTCAGCGCGCGGCGCCTTCGGTAGCTGGGAGGAGGAACGGTaGTGTCATGCCTTCCGGGCTCCTCAGGTTCCTTATTTTCGTCAT +
Preference number: 5 (lower is better)
Translates to: VRSARGAFGSWEEER*CHAFRAPQVPYFRH
Trigger: ATGACGAAAATAAGGAACCTGAGGAGCCCGGAAGGCATGACATCACCGTTCCTCCTCCCAGCTACCGAAGGCGCCGCGCGCTGACCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS CCA 90 bp TGGAGCTGTGGAAGTGGTAGATCCACATCAGGGTGTCCAGGGAGCTaGGGGTCCCCTTCATGGCCGCCACAAGTGGTAGGACAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: WSCGSGRSTSGCPGS*GSPSWPPQVVGQEK
Trigger: CTTCTCCTGTCCTACCACTTGTGGCGGCCATGAAGGGGACCCCCAGCTCCCTGGACACCCTGATGTGGATCTACCACTTCCACAGCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS TCA 90 bp TCCCCTGCATCTTCGGTTCGGGTGGCTCCAGGGACTTCAGCTCTCTaGACCTCTGCTCCAGATATTCATGGGCTGCGGCCACGGAGAGTT +
Preference number: 5 (lower is better)
Translates to: SPASSVRVAPGTSAL*TSAPDIHGLRPRRV
Trigger: AACTCTCCGTGGCCGCAGCCCATGAATATCTGGAGCAGAGGTTCAGAGAGCTGAAGTCCCTGGAGCCACCCGAACCGAAGATGCAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS GCA 90 bp ATCTTCGGTTCGGGTGGCTCCAGGGACTTCAGCTCTCTGAACCTCTaGTCCAGATATTCATGGGCTGCGGCCACGGAGAGTTCCAGGGAA +
Preference number: 5 (lower is better)
Translates to: IFGSGGSRDFSSLNL*SRYSWAAATESSRE
Trigger: TTCCCTGGAACTCTCCGTGGCCGCAGCCCATGAATATCTGGAGCAGAGGTTCAGAGAGCTGAAGTCCCTGGAGCCACCCGAACCGAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS-3UTR CAA 90 bp AGTGGCCTACGACGCCAACGTGCTCGTCTACGAGGGCGGCTCCGTGACGTGGCTTCTTCTTGTTCCTCATaGCCCAGAAAATCCCAGAGA +
Preference number: 5 (lower is better)
Translates to: SGLRRQRARLRGRLRDVASSCSS*PRKSQR
Trigger: TCTCTGGGATTTTCTGGGCAATGAGGAACAAGAAGA...AGCCACGTCACGGAGCCGCCCTCGTAGACGAGCACGTTGGCGTCGTAGGCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR CAA 90 bp GAGGTGGAGTTCACTTTTGCCGTAGACAACGACGGCAAGACCATCAACAAGATCTCCCGAGTAGCTCTCTaGGGGGACAGTCCGGCTCAG +
Preference number: 5 (lower is better)
Translates to: EVEFTFAVDNDGKTINKISRVAL*GDSPAQ
Trigger: CTGAGCCGGACTGTCCCCCAAGAGAGCTACTCGGGA...GATCTTGTTGATGGTCTTGCCGTCGTTGTCTACGGCAAAAGTGAACTCCACCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR CAA 90 bp ACTGTTCGCTTATTTTCCGGTGGGAAGAGCTACTCCGAGGCCCGGACGATTATTCCCGAGCCCACAGTATaGATGGCCAGTTCGGAGTGG +
Preference number: 5 (lower is better)
Translates to: TVRLFSGGKSYSEARTIIPEPTV*MASSEW
Trigger: CCACTCCGAACTGGCCATCAATACTGTGGGCTCGGG...AATAATCGTCCGGGCCTCGGAGTAGCTCTTCCCACCGGAAAATAAGCGAACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR CAA 90 bp CAGAACTGTTCGCTTATTTTCCGGTGGGAAGAGCTACTCCGAGGCCCGGACGATCCCCACCCCTTAGGATaGGCAGGATTACCGACTCAA +
Preference number: 5 (lower is better)
Translates to: QNCSLIFRWEELLRGPDDPHPLG*AGLPTQ
Trigger: TTGAGTCGGTAATCCTGCCAATCCTAAGGGGTGGGG...ATCGTCCGGGCCTCGGAGTAGCTCTTCCCACCGGAAAATAAGCGAACAGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS-3UTR CAA 90 bp GAAATCATTCTCGATTGTTACTCTAGTCCTGCCTTCTGGCTTTCCATACCCTCAGCCCAGACCGTCTTCTaGTTCCTCATTGCCCAGAAA +
Preference number: 5 (lower is better)
Translates to: EIILDCYSSPAFWLSIPSAQTVF*FLIAQK
Trigger: TTTCTGGGCAATGAGGAACAAGAAGACGGTCTGGGC...TGAGGGTATGGAAAGCCAGAAGGCAGGACTAGAGTAACAATCGAGAATGATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS GCA 72 bp GCTGGGCCCGCGCTGCCGTCTAGTCGCCGCGCCTCCTaGTGCAGCCACAGGGCTGAGATCTCTAACAAGGTG +
Preference number: 6 (lower is better)
Translates to: AGPALPSSRRAS*CSHRAEISNKV
Trigger: CACCTTGTTAGAGATCTCAGCCCTGTGGCTGCAGCAGGAGGCGCGGCGACTAGACGGCAGCGCGGGCCCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS TCA 72 bp GGCGTAACCAGCCCGTACCAGGAGAAGCCGTGTTTGTaGGGTCAGCGCGCGGCGCCTTCGGTAGCTGGGAGG +
Preference number: 6 (lower is better)
Translates to: GVTSPYQEKPCL*GQRAAPSVAGR
Trigger: CCTCCCAGCTACCGAAGGCGCCGCGCGCTGACCTCACAAACACGGCTTCTCCTGGTACGGGCTGGTTACGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS TCA 72 bp GCGCGCGGCGCCTTCGGTAGCTGGGAGGAGGAACGGTaGTGTCATGCCTTCCGGGCTCCTCAGGTTCCTTAT +
Preference number: 6 (lower is better)
Translates to: ARGAFGSWEEER*CHAFRAPQVPY
Trigger: ATAAGGAACCTGAGGAGCCCGGAAGGCATGACATCACCGTTCCTCCTCCCAGCTACCGAAGGCGCCGCGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS CCA 72 bp CGGGGCAGGCAGCATCCCCTGCATCTTCGGTTCGGGTaGCTCCAGGGACTTCAGCTCTCTGAACCTCTGCTC +
Preference number: 6 (lower is better)
Translates to: RGRQHPLHLRFG*LQGLQLSEPLL
Trigger: GAGCAGAGGTTCAGAGAGCTGAAGTCCCTGGAGCCACCCGAACCGAAGATGCAGGGGATGCTGCCTGCCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS GCA 72 bp GCTGCAGCCACAGGGCTGAGATCTCTAACAAGGTGGTaGCGAAGCTCACGAGGCTGGCTGTGGCTTCTCTCA +
Preference number: 6 (lower is better)
Translates to: AAATGLRSLTRW*RSSRGWLWLLS
Trigger: TGAGAGAAGCCACAGCCAGCCTCGTGAGCTTCGGCACCACCTTGTTAGAGATCTCAGCCCTGTGGCTGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381365.4
CDS GCA 72 bp TTCGTCATGGTGGTCGCCACGCTCATTGTCATGAATTaGGTCATCGTGCTCAACGTGTCCCAGCGGACGCCC +
Preference number: 6 (lower is better)
Translates to: FVMVVATLIVMN*VIVLNVSQRTP
Trigger: GGGCGTCCGCTGGGACACGTTGAGCACGATGACGCAATTCATGACAATGAGCGTGGCGACCACCATGACGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521575.1
CDS CAA 72 bp TTTCGTCATGGTGGTCGCCACGCTCATTGTCATGAATaGCGTCATCGTGCTCAACGTGTCCCAGCGGACGCC +
Preference number: 6 (lower is better)
Translates to: FRHGGRHAHCHE*RHRAQRVPADA
Trigger: GGCGTCCGCTGGGACACGTTGAGCACGATGACGCAATTCATGACAATGAGCGTGGCGACCACCATGACGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521575.1
CDS CCA 72 bp GACTTCAGCTCTCTGAACCTCTGCTCCAGATATTCATaGGCTGCGGCCACGGAGAGTTCCAGGGAAGACAGA +
Preference number: 6 (lower is better)
Translates to: DFSSLNLCSRYS*AAATESSREDR
Trigger: TCTGTCTTCCCTGGAACTCTCCGTGGCCGCAGCCCATGAATATCTGGAGCAGAGGTTCAGAGAGCTGAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381365.4
ENST00000521575.1
CDS TCA 72 bp TTATTTTCGTCATGGTGGTCGCCACGCTCATTGTCATaGATTGCGTCATCGTGCTCAACGTGTCCCAGCGGA +
Preference number: 6 (lower is better)
Translates to: LFSSWWSPRSLS*IASSCSTCPSG
Trigger: TCCGCTGGGACACGTTGAGCACGATGACGCAATTCATGACAATGAGCGTGGCGACCACCATGACGAAAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521575.1