RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C14ORF180 (Homo sapiens)

Ensembl gene IDs: ENSG00000184601, ENSG00000274126

Ensembl transcript IDs: ENST00000331952.6, ENST00000410013.1, ENST00000557649.6, ENST00000618752.2, ENST00000619279.4, ENST00000630349.2

Found 648 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCAAGCAGCAGGGCCAGGGCTCAGGCTGTCTCGGAGCCCCCGGAGTaGTTGAGCTCTCCTGGAAGCCCTGCCCGTCCTGCCCGTCCTGCC +
Preference number: 1 (lower is better)
Translates to: PSSRARAQAVSEPPE*LSSPGSPARPARPA
Trigger: GGCAGGACGGGCAGGACGGGCAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGAGACAGCCTGAGCCCTGGCCCTGCTGCTTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
3UTR CCA 90 bp CAGGGCAAAGGGAGCCGGCCGGGCATCCCTCAAGACCCAGGGGCTTaGTCAGCCCCTGCCCGAGTGGACACATCCACTCCCAGGCCTGCA +
Preference number: 1 (lower is better)
Translates to: QGKGSRPGIPQDPGA*SAPARVDTSTPRPA
Trigger: TGCAGGCCTGGGAGTGGATGTGTCCACTCGGGCAGGGGCTGACCAAGCCCCTGGGTCTTGAGGGATGCCCGGCCGGCTCCCTTTGCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
3UTR GCA 90 bp GTAGCGTGGGACCCCGCAAAGCCAGGCACGTCCTTGCGTTGCCTTTaGAGTGGACAGACAGCAGCGGCTGGGGGAGATCGGCCTGTGCGG +
Preference number: 1 (lower is better)
Translates to: VAWDPAKPGTSLRCL*SGQTAAAGGDRPVR
Trigger: CCGCACAGGCCGATCTCCCCCAGCCGCTGCTGTCTGTCCACTGCAAAGGCAACGCAAGGACGTGCCTGGCTTTGCGGGGTCCCACGCTAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
3UTR CCA 90 bp AGCCCCTGCCCGAGTGGACACATCCACTCCCAGGCCTGCAGGAGATaGGGAGGTTCCAGGCGCCCAGGACATCCGCTTTGGCCACTGAGG +
Preference number: 1 (lower is better)
Translates to: SPCPSGHIHSQACRR*GGSRRPGHPLWPLR
Trigger: CCTCAGTGGCCAAAGCGGATGTCCTGGGCGCCTGGAACCTCCCCATCTCCTGCAGGCCTGGGAGTGGATGTGTCCACTCGGGCAGGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
3UTR CCA 90 bp GTGGGACCCCGCAAAGCCAGGCACGTCCTTGCGTTGCCTTTGCAGTaGACAGACAGCAGCGGCTGGGGGAGATCGGCCTGTGCGGTGTCC +
Preference number: 1 (lower is better)
Translates to: VGPRKARHVLALPLQ*TDSSGWGRSACAVS
Trigger: GGACACCGCACAGGCCGATCTCCCCCAGCCGCTGCTGTCTGTCCACTGCAAAGGCAACGCAAGGACGTGCCTGGCTTTGCGGGGTCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
3UTR TCA 90 bp TTGAACACGGGCAGTGTGTCCCCCTCCTCAAGAGGGTGCACACGGTaGTGGCCGGGCCAGGCCCTAGCAGCAGCAGGAGTTCCTGCTGGG +
Preference number: 1 (lower is better)
Translates to: LNTGSVSPSSRGCTR*WPGQALAAAGVPAG
Trigger: CCCAGCAGGAACTCCTGCTGCTGCTAGGGCCTGGCCCGGCCATCACCGTGTGCACCCTCTTGAGGAGGGGGACACACTGCCCGTGTTCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
3UTR GCA 90 bp GAGGTCGTAGCGTGGGACCCCGCAAAGCCAGGCACGTCCTTGCGTTaGCTTTGCAGTGGACAGACAGCAGCGGCTGGGGGAGATCGGCCT +
Preference number: 1 (lower is better)
Translates to: EVVAWDPAKPGTSLR*LCSGQTAAAGGDRP
Trigger: AGGCCGATCTCCCCCAGCCGCTGCTGTCTGTCCACTGCAAAGGCAACGCAAGGACGTGCCTGGCTTTGCGGGGTCCCACGCTACGACCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
3UTR TCA 90 bp CCACTTCACCTGTTCCCTGGCACCTGGAGTTGCAGGGACACACCCTaGCTGCAGGGCAAAGGGAGCCGGCCGGGCATCCCTCAAGACCCA +
Preference number: 1 (lower is better)
Translates to: PLHLFPGTWSCRDTP*LQGKGSRPGIPQDP
Trigger: TGGGTCTTGAGGGATGCCCGGCCGGCTCCCTTTGCCCTGCAGTCAGGGTGTGTCCCTGCAACTCCAGGTGCCAGGGAACAGGTGAAGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
3UTR CCA 90 bp TGTCTCCCAGTTAAGTGGTGGGACAAACAGGAACCACCGGGTGGATaGTCGGCCGTGCCCACCCGCCTCAGGCTAACCTCGAGGACGCTG +
Preference number: 1 (lower is better)
Translates to: CLPVKWWDKQEPPGG*SAVPTRLRLTSRTL
Trigger: CAGCGTCCTCGAGGTTAGCCTGAGGCGGGTGGGCACGGCCGACCATCCACCCGGTGGTTCCTGTTTGTCCCACCACTTAACTGGGAGACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
3UTR GCA 90 bp GGAGAGGCCCCTGGTGTTTGTCATCCACAGGGCTCCCTTCAGCTCTaGAATCCGGCGACAAAGCCACAACCACAGACGGTCTCCGGGACC +
Preference number: 1 (lower is better)
Translates to: GEAPGVCHPQGSLQL*NPATKPQPQTVSGT
Trigger: GGTCCCGGAGACCGTCTGTGGTTGTGGCTTTGTCGCCGGATTGCAGAGCTGAAGGGAGCCCTGTGGATGACAAACACCAGGGGCCTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
3UTR TCA 90 bp GACCTGGGCTCAGAGGATGGCACCTCACATCAAAGGGACCCACCTTaGCAACCAGACCCTTCCCTCCCCGTGGGGTTTCGAGGTCTGGAT +
Preference number: 1 (lower is better)
Translates to: DLGSEDGTSHQRDPP*QPDPSLPVGFRGLD
Trigger: ATCCAGACCTCGAAACCCCACGGGGAGGGAAGGGTCTGGTTGTCAAGGTGGGTCCCTTTGATGTGAGGTGCCATCCTCTGAGCCCAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
3UTR TCA 90 bp ACCTCCACCCGCAACTCTGGGCTCCCTGGATTCCAAAGCTGGAAGTaGCCCTGGAGACCACTTCACCTGTTCCCTGGCACCTGGAGTTGC +
Preference number: 1 (lower is better)
Translates to: TSTRNSGLPGFQSWK*PWRPLHLFPGTWSC
Trigger: GCAACTCCAGGTGCCAGGGAACAGGTGAAGTGGTCTCCAGGGTCACTTCCAGCTTTGGAATCCAGGGAGCCCAGAGTTGCGGGTGGAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
3UTR CCA 90 bp ATTCCAAAGCTGGAAGTGACCCTGGAGACCACTTCACCTGTTCCCTaGCACCTGGAGTTGCAGGGACACACCCTGACTGCAGGGCAAAGG +
Preference number: 1 (lower is better)
Translates to: IPKLEVTLETTSPVP*HLELQGHTLTAGQR
Trigger: CCTTTGCCCTGCAGTCAGGGTGTGTCCCTGCAACTCCAGGTGCCAGGGAACAGGTGAAGTGGTCTCCAGGGTCACTTCCAGCTTTGGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
3UTR CCA 90 bp GCCACTTCTGGAAACAGCCCCTTTTGTTACCTCCACCCGCAACTCTaGGCTCCCTGGATTCCAAAGCTGGAAGTGACCCTGGAGACCACT +
Preference number: 1 (lower is better)
Translates to: ATSGNSPFCYLHPQL*APWIPKLEVTLETT
Trigger: AGTGGTCTCCAGGGTCACTTCCAGCTTTGGAATCCAGGGAGCCCAGAGTTGCGGGTGGAGGTAACAAAAGGGGCTGTTTCCAGAAGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
3UTR CCA 90 bp GGAAACAGCCCCTTTTGTTACCTCCACCCGCAACTCTGGGCTCCCTaGATTCCAAAGCTGGAAGTGACCCTGGAGACCACTTCACCTGTT +
Preference number: 1 (lower is better)
Translates to: GNSPFCYLHPQLWAP*IPKLEVTLETTSPV
Trigger: AACAGGTGAAGTGGTCTCCAGGGTCACTTCCAGCTTTGGAATCCAGGGAGCCCAGAGTTGCGGGTGGAGGTAACAAAAGGGGCTGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
3UTR CCA 90 bp AGGAAGCCACGGTGTGTTTTAATAAAACAGTGTCTCCCAGTTAAGTaGTGGGACAAACAGGAACCACCGGGTGGATGGTCGGCCGTGCCC +
Preference number: 1 (lower is better)
Translates to: RKPRCVLIKQCLPVK*WDKQEPPGGWSAVP
Trigger: GGGCACGGCCGACCATCCACCCGGTGGTTCCTGTTTGTCCCACCACTTAACTGGGAGACACTGTTTTATTAAAACACACCGTGGCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
3UTR CAA 90 bp GCAGGGCAAAGGGAGCCGGCCGGGCATCCCTCAAGACCCAGGGGCTaGGTCAGCCCCTGCCCGAGTGGACACATCCACTCCCAGGCCTGC +
Preference number: 2 (lower is better)
Translates to: AGQREPAGHPSRPRG*VSPCPSGHIHSQAC
Trigger: GCAGGCCTGGGAGTGGATGTGTCCACTCGGGCAGGGGCTGACCAAGCCCCTGGGTCTTGAGGGATGCCCGGCCGGCTCCCTTTGCCCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
3UTR-3UTR CCA 90 bp GTGGGACAAACAGGAACCACCGGGTGGATGGTCGGCCGTGCCCACCCGCCTCAGCCCACAGGCCCCAGCTaGTGGGTGGTGCTGGCTGGC +
Preference number: 2 (lower is better)
Translates to: VGQTGTTGWMVGRAHPPQPTGPS*WVVLAG
Trigger: GCCAGCCAGCACCACCCACCAGCTGGGGCCTGTGGG...CTGAGGCGGGTGGGCACGGCCGACCATCCACCCGGTGGTTCCTGTTTGTCCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
3UTR-3UTR CCA 90 bp GCAATCCGGCGACAAAGCCACAACCACAGACGGTCTCCGGGACCCACAGGCCCCGCTGGTGGGTGGTGCTaGCTGGCCCCGGGCTCAGCT +
Preference number: 2 (lower is better)
Translates to: AIRRQSHNHRRSPGPTGPAGGWC*LAPGSA
Trigger: AGCTGAGCCCGGGGCCAGCCAGCACCACCCACCAGC...GGGGCCTGTGGGTCCCGGAGACCGTCTGTGGTTGTGGCTTTGTCGCCGGATTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
3UTR-3UTR TCA 90 bp GCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCTCAAGAGGACAGGAGGGCTGTGCTaGCTAGTGTGGCGGGGCCGC +
Preference number: 2 (lower is better)
Translates to: ASSEQPLEHGQCVPLLKRTGGLC*LVWRGR
Trigger: GCGGCCCCGCCACACTAGTCAGCACAGCCCTCCTGT...CCTCTTGAGGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
3UTR-3UTR TCA 90 bp CCAGGCCCTAGCAGCAGCAGGAGTTCCTGCTGGGACGAGGGAGGGGTCTTTGGGACAGGAGGGCTGTGCTaGCTAGTGTGGCGGGGCCGC +
Preference number: 2 (lower is better)
Translates to: PGPSSSRSSCWDEGGVFGTGGLC*LVWRGR
Trigger: GCGGCCCCGCCACACTAGTCAGCACAGCCCTCCTGT...CCCAAAGACCCCTCCCTCGTCCCAGCAGGAACTCCTGCTGCTGCTAGGGCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
3UTR CAA 90 bp CGTAGCGTGGGACCCCGCAAAGCCAGGCACGTCCTTGCGTTGCCTTaGCAGTGGACAGACAGCAGCGGCTGGGGGAGATCGGCCTGTGCG +
Preference number: 2 (lower is better)
Translates to: RSVGPRKARHVLALP*QWTDSSGWGRSACA
Trigger: CGCACAGGCCGATCTCCCCCAGCCGCTGCTGTCTGTCCACTGCAAAGGCAACGCAAGGACGTGCCTGGCTTTGCGGGGTCCCACGCTACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
3UTR-3UTR TCA 90 bp TCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCTCAAGAGGGTGCACACAGGAGGGCTGTGCTaGCTAGTGTGGCGGGGCCGC +
Preference number: 2 (lower is better)
Translates to: SEQPLEHGQCVPLLKRVHTGGLC*LVWRGR
Trigger: GCGGCCCCGCCACACTAGTCAGCACAGCCCTCCTGT...GTGCACCCTCTTGAGGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
3UTR-3UTR TCA 90 bp GCAATCCGGCGACAAAGCCACAACCACAGACGGTCTCCGGGACCCACAGGCCCCCTCCGAGCAGCCCCTTaGACACGGGCAGTGTGTCCC +
Preference number: 2 (lower is better)
Translates to: AIRRQSHNHRRSPGPTGPLRAAP*TRAVCP
Trigger: GGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAG...GGGGCCTGTGGGTCCCGGAGACCGTCTGTGGTTGTGGCTTTGTCGCCGGATTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
3UTR-3UTR TCA 90 bp GCAATCCGGCGACAAAGCCACAACCACAGACGGTCTCCGGGACCCACAGGCCCCAGCCCCCGGAGTGCTTaGGCTCTCCTGGAAGCCCTG +
Preference number: 2 (lower is better)
Translates to: AIRRQSHNHRRSPGPTGPSPRSA*ALLEAL
Trigger: CAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCT...GGGGCCTGTGGGTCCCGGAGACCGTCTGTGGTTGTGGCTTTGTCGCCGGATTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
3UTR-3UTR TCA 90 bp CTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCAGCCCCCGGAGTGCTTaGGCTCTCCTGGAAGCCCTG +
Preference number: 2 (lower is better)
Translates to: LGLPPPSSPLNTGSVSPSSPRSA*ALLEAL
Trigger: CAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCT...GGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
3UTR-3UTR CCA 90 bp CTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCCGAGGGAGGGGTCTTTaGGTGAGCCTGGGGAGCCTC +
Preference number: 2 (lower is better)
Translates to: LGLPPPSSPLNTGSVSPSRGRGL*VSLGSL
Trigger: GAGGCTCCCCAGGCTCACCCAAAGACCCCTCCCTCG...GGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
3UTR-3UTR CCA 90 bp GTGGGACAAACAGGAACCACCGGGTGGATGGTCGGCCGTGCCCACCCGCCTCAGGTGCTTGAGCTCTCCTaGAAGCCCTGCCCGTCCTGC +
Preference number: 2 (lower is better)
Translates to: VGQTGTTGWMVGRAHPPQVLELS*KPCPSC
Trigger: GCAGGACGGGCAGGGCTTCCAGGAGAGCTCAAGCAC...CTGAGGCGGGTGGGCACGGCCGACCATCCACCCGGTGGTTCCTGTTTGTCCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
3UTR-3UTR CCA 90 bp GTGGGACAAACAGGAACCACCGGGTGGATGGTCGGCCGTGCCCACCCGCCTCAGCCCCCACGTAGGGTCTaGAGAGGCCCCTGGTGTTTG +
Preference number: 2 (lower is better)
Translates to: VGQTGTTGWMVGRAHPPQPPRRV*RGPWCL
Trigger: CAAACACCAGGGGCCTCTCCAGACCCTACGTGGGGG...CTGAGGCGGGTGGGCACGGCCGACCATCCACCCGGTGGTTCCTGTTTGTCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
3UTR-3UTR TCA 90 bp TCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCTCAAGAGGGTGCACAGCCCCCGGAGTGCTTaGGCTCTCCTGGAAGCCCTG +
Preference number: 2 (lower is better)
Translates to: SEQPLEHGQCVPLLKRVHSPRSA*ALLEAL
Trigger: CAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCT...GTGCACCCTCTTGAGGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
3UTR-3UTR GCA 90 bp CTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCTCGGAGCCCCCGGAGTaGTTGAGCTCTCCTGGAAGC +
Preference number: 2 (lower is better)
Translates to: LGLPPPSSPLNTGSVSPSSEPPE*LSSPGS
Trigger: GCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGA...GGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
3UTR-3UTR CCA 90 bp ACCCTGGAGACCACTTCACCTGTTCCCTGGCACCTGGAGTTGCAGGGACACACCCCCACAGGCCCCAGCTaGTGGGTGGTGCTGGCTGGC +
Preference number: 2 (lower is better)
Translates to: TLETTSPVPWHLELQGHTPTGPS*WVVLAG
Trigger: GCCAGCCAGCACCACCCACCAGCTGGGGCCTGTGGG...GGTGTGTCCCTGCAACTCCAGGTGCCAGGGAACAGGTGAAGTGGTCTCCAGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
3UTR-3UTR CCA 90 bp GGACAAACAGGAACCACCGGGTGGATGGTCGGCCGTGCCCACCCGCCTCAGGCTCTGGGCAGTTCTGCCTaGTGTCTAACCGTGGGCCTC +
Preference number: 2 (lower is better)
Translates to: GQTGTTGWMVGRAHPPQALGSSA*CLTVGL
Trigger: GAGGCCCACGGTTAGACACCAGGCAGAACTGCCCAG...AGCCTGAGGCGGGTGGGCACGGCCGACCATCCACCCGGTGGTTCCTGTTTGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
3UTR-3UTR CCA 90 bp GTGGGACAAACAGGAACCACCGGGTGGATGGTCGGCCGTGCCCACCCGCCTCAGCTGGGCAGTTCTGCCTaGTGTCTAACCGTGGGCCTC +
Preference number: 2 (lower is better)
Translates to: VGQTGTTGWMVGRAHPPQLGSSA*CLTVGL
Trigger: GAGGCCCACGGTTAGACACCAGGCAGAACTGCCCAG...CTGAGGCGGGTGGGCACGGCCGACCATCCACCCGGTGGTTCCTGTTTGTCCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
3UTR CAA 90 bp GAAGTGACCCTGGAGACCACTTCACCTGTTCCCTGGCACCTGGAGTaGCAGGGACACACCCTGACTGCAGGGCAAAGGGAGCCGGCCGGG +
Preference number: 2 (lower is better)
Translates to: EVTLETTSPVPWHLE*QGHTLTAGQREPAG
Trigger: CCCGGCCGGCTCCCTTTGCCCTGCAGTCAGGGTGTGTCCCTGCAACTCCAGGTGCCAGGGAACAGGTGAAGTGGTCTCCAGGGTCACTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
3UTR-3UTR TCA 90 bp CACGTAGGGTCTGGAGAGGCCCCTGGTGTTTGTCATCCACAGGGCTCCCTTCAGACAGGAGGGCTGTGCTaGCTAGTGTGGCGGGGCCGC +
Preference number: 2 (lower is better)
Translates to: HVGSGEAPGVCHPQGSLQTGGLC*LVWRGR
Trigger: GCGGCCCCGCCACACTAGTCAGCACAGCCCTCCTGT...CTGAAGGGAGCCCTGTGGATGACAAACACCAGGGGCCTCTCCAGACCCTACGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
3UTR-3UTR TCA 90 bp GCAATCCGGCGACAAAGCCACAACCACAGACGGTCTCCGGGACCCACAGGCCCCCACAGATGGCTGTTCTaGAGGTCGGGGGTGTCTGGG +
Preference number: 2 (lower is better)
Translates to: AIRRQSHNHRRSPGPTGPHRWLF*RSGVSG
Trigger: CCCAGACACCCCCGACCTTCAGAACAGCCATCTGTG...GGGGCCTGTGGGTCCCGGAGACCGTCTGTGGTTGTGGCTTTGTCGCCGGATTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
3UTR-3UTR TCA 90 bp GTGGGACAAACAGGAACCACCGGGTGGATGGTCGGCCGTGCCCACCCGCCTCAGTCGAGGACGCTGGTCTaGTTGTCCCTGTGTCTCTCC +
Preference number: 2 (lower is better)
Translates to: VGQTGTTGWMVGRAHPPQSRTLV*LSLCLS
Trigger: GGAGAGACACAGGGACAATCAGACCAGCGTCCTCGA...CTGAGGCGGGTGGGCACGGCCGACCATCCACCCGGTGGTTCCTGTTTGTCCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
3UTR-3UTR CCA 90 bp GGACAAACAGGAACCACCGGGTGGATGGTCGGCCGTGCCCACCCGCCTCAGGCTACCCTTCCCTCCCCGTaGGGTTTCGAGGTCTGGATT +
Preference number: 2 (lower is better)
Translates to: GQTGTTGWMVGRAHPPQATLPSP*GFEVWI
Trigger: AATCCAGACCTCGAAACCCCACGGGGAGGGAAGGGT...AGCCTGAGGCGGGTGGGCACGGCCGACCATCCACCCGGTGGTTCCTGTTTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
3UTR-3UTR CCA 90 bp GCCTGCAGGAGATGGGGAGGTTCCAGGCGCCCAGGACATCCGCTTTGGCCACTGCCTGGCCTGCAGAGCTaGGCACAGATGGCTGTTCTG +
Preference number: 2 (lower is better)
Translates to: ACRRWGGSRRPGHPLWPLPGLQS*AQMAVL
Trigger: CAGAACAGCCATCTGTGCCCAGCTCTGCAGGCCAGG...CAGTGGCCAAAGCGGATGTCCTGGGCGCCTGGAACCTCCCCATCTCCTGCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
3UTR-3UTR CCA 90 bp TCTGGGAGCCGCTGCTTCTGCATCCAGAATATGGGGCAGGAACCTGCCCATCCTGCTGGTGGGTGGTGCTaGCTGGCCCCGGGCTCAGCT +
Preference number: 2 (lower is better)
Translates to: SGSRCFCIQNMGQEPAHPAGGWC*LAPGSA
Trigger: AGCTGAGCCCGGGGCCAGCCAGCACCACCCACCAGC...AGGATGGGCAGGTTCCTGCCCCATATTCTGGATGCAGAAGCAGCGGCTCCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
3UTR CAA 90 bp ACACCTGAGGTCGTAGCGTGGGACCCCGCAAAGCCAGGCACGTCCTaGCGTTGCCTTTGCAGTGGACAGACAGCAGCGGCTGGGGGAGAT +
Preference number: 2 (lower is better)
Translates to: TPEVVAWDPAKPGTS*RCLCSGQTAAAGGD
Trigger: ATCTCCCCCAGCCGCTGCTGTCTGTCCACTGCAAAGGCAACGCAAGGACGTGCCTGGCTTTGCGGGGTCCCACGCTACGACCTCAGGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
3UTR-3UTR TCA 90 bp AATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTAGAGGGTGCACACGGTaGTGGCCGGGCCAGGCCCTA +
Preference number: 2 (lower is better)
Translates to: NRKRLGLPPPSSPLNTGSRGCTR*WPGQAL
Trigger: TAGGGCCTGGCCCGGCCATCACCGTGTGCACCCTCT...ACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
3UTR-3UTR TCA 90 bp AAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCTCCGAGCAGCCCCTTaGACACGGGCAGTGTGTCCC +
Preference number: 2 (lower is better)
Translates to: KRLGLPPPSSPLNTGSVSLRAAP*TRAVCP
Trigger: GGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAG...GGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
3UTR-3UTR GCA 90 bp CCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGCGGGGCCGCCTGCTGTaGCCCCCATGTCCGATCTCA +
Preference number: 2 (lower is better)
Translates to: PTSHNRKRLGLPPPSSPLRGRLL*PPCPIS
Trigger: TGAGATCGGACATGGGGGGCACAGCAGGCGGCCCCG...CAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
3UTR-3UTR CCA 90 bp CAGGGCTCCCTTCAGCTCTGCAATCCGGCGACAAAGCCACAACCACAGACGGTCCGAGGGAGGGGTCTTTaGGTGAGCCTGGGGAGCCTC +
Preference number: 2 (lower is better)
Translates to: QGSLQLCNPATKPQPQTVRGRGL*VSLGSL
Trigger: GAGGCTCCCCAGGCTCACCCAAAGACCCCTCCCTCG...GACCGTCTGTGGTTGTGGCTTTGTCGCCGGATTGCAGAGCTGAAGGGAGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
3UTR-3UTR TCA 90 bp GATTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCACAGGAGGGCTGTGCTaGCTAGTGTGGCGGGGCCGC +
Preference number: 2 (lower is better)
Translates to: DSPQAIIAKGWVCLLRAATGGLC*LVWRGR
Trigger: GCGGCCCCGCCACACTAGTCAGCACAGCCCTCCTGT...GGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
3UTR-3UTR TCA 90 bp AGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGAGAGGGTGCACACGGTaGTGGCCGGGCCAGGCCCTA +
Preference number: 2 (lower is better)
Translates to: SHNRKRLGLPPPSSPLNTRGCTR*WPGQAL
Trigger: TAGGGCCTGGCCCGGCCATCACCGTGTGCACCCTCT...CGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
3UTR-3UTR GCA 90 bp AGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGCGGGGCCGCCTGCTGTaGCCCCCATGTCCGATCTCA +
Preference number: 2 (lower is better)
Translates to: SHNRKRLGLPPPSSPLNTRGRLL*PPCPIS
Trigger: TGAGATCGGACATGGGGGGCACAGCAGGCGGCCCCG...CGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
3UTR-3UTR GCA 90 bp GATTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCGGGGCCGCCTGCTGTaGCCCCCATGTCCGATCTCA +
Preference number: 2 (lower is better)
Translates to: DSPQAIIAKGWVCLLRAARGRLL*PPCPIS
Trigger: TGAGATCGGACATGGGGGGCACAGCAGGCGGCCCCG...GGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
3UTR-3UTR GCA 90 bp AAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCTCGGAGCCCCCGGAGTaGTTGAGCTCTCCTGGAAGC +
Preference number: 2 (lower is better)
Translates to: KRLGLPPPSSPLNTGSVSSEPPE*LSSPGS
Trigger: GCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGA...GGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
3UTR-3UTR GCA 90 bp GGCTCCCTTCAGCTCTGCAATCCGGCGACAAAGCCACAACCACAGACGGTCTCCTCGGAGCCCCCGGAGTaGTTGAGCTCTCCTGGAAGC +
Preference number: 2 (lower is better)
Translates to: GSLQLCNPATKPQPQTVSSEPPE*LSSPGS
Trigger: GCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGA...GGAGACCGTCTGTGGTTGTGGCTTTGTCGCCGGATTGCAGAGCTGAAGGGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
3UTR-3UTR GCA 90 bp TCTGGGAGCCGCTGCTTCTGCATCCAGAATATGGGGCAGGAACCTGCCCATCCTGGGACACACCCTGACTaGAGGGCAAAGGGAGCCGGC +
Preference number: 2 (lower is better)
Translates to: SGSRCFCIQNMGQEPAHPGTHPD*RAKGAG
Trigger: GCCGGCTCCCTTTGCCCTGCAGTCAGGGTGTGTCCC...AGGATGGGCAGGTTCCTGCCCCATATTCTGGATGCAGAAGCAGCGGCTCCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
3UTR-3UTR CCA 90 bp CCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGCGAGGGAGGGGTCTTTaGGTGAGCCTGGGGAGCCTC +
Preference number: 2 (lower is better)
Translates to: PTSHNRKRLGLPPPSSPLRGRGL*VSLGSL
Trigger: GAGGCTCCCCAGGCTCACCCAAAGACCCCTCCCTCG...CAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
3UTR-3UTR CCA 90 bp TCTGGGAGCCGCTGCTTCTGCATCCAGAATATGGGGCAGGAACCTGCCCATCCTCGAGGGAGGGGTCTTTaGGTGAGCCTGGGGAGCCTC +
Preference number: 2 (lower is better)
Translates to: SGSRCFCIQNMGQEPAHPRGRGL*VSLGSL
Trigger: GAGGCTCCCCAGGCTCACCCAAAGACCCCTCCCTCG...AGGATGGGCAGGTTCCTGCCCCATATTCTGGATGCAGAAGCAGCGGCTCCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
3UTR-3UTR CCA 90 bp TCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCTCAAGAGGGTGAGCAGGAGTTCCTGCTaGGACGAGGGAGGGGTCTTT +
Preference number: 2 (lower is better)
Translates to: SSEQPLEHGQCVPLLKRVSRSSC*DEGGVF
Trigger: AAAGACCCCTCCCTCGTCCCAGCAGGAACTCCTGCT...CACCCTCTTGAGGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
3UTR-3UTR CCA 90 bp GGCTCCCTTCAGCTCTGCAATCCGGCGACAAAGCCACAACCACAGACGGTCTCCGTGCTTGAGCTCTCCTaGAAGCCCTGCCCGTCCTGC +
Preference number: 2 (lower is better)
Translates to: GSLQLCNPATKPQPQTVSVLELS*KPCPSC
Trigger: GCAGGACGGGCAGGGCTTCCAGGAGAGCTCAAGCAC...GGAGACCGTCTGTGGTTGTGGCTTTGTCGCCGGATTGCAGAGCTGAAGGGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
3UTR-3UTR CCA 90 bp GGAGCCGCTGCTTCTGCATCCAGAATATGGGGCAGGAACCTGCCCATCCTCCTTACAGGAACCACCGGGTaGATGGTCGGCCGTGCCCAC +
Preference number: 2 (lower is better)
Translates to: GAAASASRIWGRNLPILLTGTTG*MVGRAH
Trigger: GTGGGCACGGCCGACCATCCACCCGGTGGTTCCTGT...AAGGAGGATGGGCAGGTTCCTGCCCCATATTCTGGATGCAGAAGCAGCGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
3UTR CAA 90 bp GCCCTAGCAGCAGCAGGAGTTCCTGCTGGGACGAGGGAGGGGTCTTaGGGTGAGCCTGGGGAGCCTCAACTGTTAGCAGTCGAATCCTCT +
Preference number: 2 (lower is better)
Translates to: ALAAAGVPAGTREGS*GEPGEPQLLAVESS
Trigger: AGAGGATTCGACTGCTAACAGTTGAGGCTCCCCAGGCTCACCCAAAGACCCCTCCCTCGTCCCAGCAGGAACTCCTGCTGCTGCTAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
3UTR-3UTR TCA 90 bp GAAACAGCCCCTTTTGTTACCTCCACCCGCAACTCTGGGCTCCCTGGATTCCAAAGAGGGTGCACACGGTaGTGGCCGGGCCAGGCCCTA +
Preference number: 2 (lower is better)
Translates to: ETAPFVTSTRNSGLPGFQRGCTR*WPGQAL
Trigger: TAGGGCCTGGCCCGGCCATCACCGTGTGCACCCTCT...TTGGAATCCAGGGAGCCCAGAGTTGCGGGTGGAGGTAACAAAAGGGGCTGTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
3UTR-3UTR GCA 90 bp CACGTAGGGTCTGGAGAGGCCCCTGGTGTTTGTCATCCACAGGGCTCCCTTCAGGCAAAAGGCTGGGTTTaGCTCCTCCGAGCAGCCCCT +
Preference number: 2 (lower is better)
Translates to: HVGSGEAPGVCHPQGSLQAKGWV*LLRAAP
Trigger: AGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGC...CTGAAGGGAGCCCTGTGGATGACAAACACCAGGGGCCTCTCCAGACCCTACGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
3UTR-3UTR GCA 90 bp GGCTCCCTTCAGCTCTGCAATCCGGCGACAAAGCCACAACCACAGACGGTCTCCGCAAAAGGCTGGGTTTaGCTCCTCCGAGCAGCCCCT +
Preference number: 2 (lower is better)
Translates to: GSLQLCNPATKPQPQTVSAKGWV*LLRAAP
Trigger: AGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGC...GGAGACCGTCTGTGGTTGTGGCTTTGTCGCCGGATTGCAGAGCTGAAGGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
3UTR-3UTR CCA 90 bp AGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGCGAGGGAGGGGTCTTTaGGTGAGCCTGGGGAGCCTC +
Preference number: 2 (lower is better)
Translates to: SHNRKRLGLPPPSSPLNTRGRGL*VSLGSL
Trigger: GAGGCTCCCCAGGCTCACCCAAAGACCCCTCCCTCG...CGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
3UTR CAA 90 bp AGACCTGGGCTCAGAGGATGGCACCTCACATCAAAGGGACCCACCTaGACAACCAGACCCTTCCCTCCCCGTGGGGTTTCGAGGTCTGGA +
Preference number: 2 (lower is better)
Translates to: RPGLRGWHLTSKGPT*TTRPFPPRGVSRSG
Trigger: TCCAGACCTCGAAACCCCACGGGGAGGGAAGGGTCTGGTTGTCAAGGTGGGTCCCTTTGATGTGAGGTGCCATCCTCTGAGCCCAGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
3UTR CAA 90 bp GGCCTGCAGGAGATGGGGAGGTTCCAGGCGCCCAGGACATCCGCTTaGGCCACTGAGGCCGATTCCTTAGCAAATCGGTTCTGGTTTCTC +
Preference number: 2 (lower is better)
Translates to: GLQEMGRFQAPRTSA*ATEADSLANRFWFL
Trigger: GAGAAACCAGAACCGATTTGCTAAGGAATCGGCCTCAGTGGCCAAAGCGGATGTCCTGGGCGCCTGGAACCTCCCCATCTCCTGCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
3UTR-3UTR TCA 90 bp AGAGGATGGCACCTCACATCAAAGGGACCCACCTTGACAACCAGACCCTTCCCTAGCCCCCGGAGTGCTTaGGCTCTCCTGGAAGCCCTG +
Preference number: 2 (lower is better)
Translates to: RGWHLTSKGPTLTTRPFPSPRSA*ALLEAL
Trigger: CAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCT...AGGGAAGGGTCTGGTTGTCAAGGTGGGTCCCTTTGATGTGAGGTGCCATCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
3UTR-3UTR GCA 90 bp TCGAGGTCTGGATTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCGGGGCCGCCTGCTGTaGCCCCCATGTCCGATCTCA +
Preference number: 2 (lower is better)
Translates to: SRSGFPTSHNRKRLGLPPRGRLL*PPCPIS
Trigger: TGAGATCGGACATGGGGGGCACAGCAGGCGGCCCCG...AGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAATCCAGACCTCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
3UTR-3UTR CCA 90 bp CACCTTGACAACCAGACCCTTCCCTCCCCGTGGGGTTTCGAGGTCTGGATTCCCAGCAGGAGTTCCTGCTaGGACGAGGGAGGGGTCTTT +
Preference number: 2 (lower is better)
Translates to: HLDNQTLPSPWGFEVWIPSRSSC*DEGGVF
Trigger: AAAGACCCCTCCCTCGTCCCAGCAGGAACTCCTGCT...GGGAATCCAGACCTCGAAACCCCACGGGGAGGGAAGGGTCTGGTTGTCAAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
3UTR-3UTR CCA 90 bp CACCTTGACAACCAGACCCTTCCCTCCCCGTGGGGTTTCGAGGTCTGGATTCCCACCCTTCCCTCCCCGTaGGGTTTCGAGGTCTGGATT +
Preference number: 2 (lower is better)
Translates to: HLDNQTLPSPWGFEVWIPTLPSP*GFEVWI
Trigger: AATCCAGACCTCGAAACCCCACGGGGAGGGAAGGGT...GGGAATCCAGACCTCGAAACCCCACGGGGAGGGAAGGGTCTGGTTGTCAAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
3UTR-3UTR CCA 90 bp AGACCTGGGCTCAGAGGATGGCACCTCACATCAAAGGGACCCACCTTGACAACCGTGCTTGAGCTCTCCTaGAAGCCCTGCCCGTCCTGC +
Preference number: 2 (lower is better)
Translates to: RPGLRGWHLTSKGPTLTTVLELS*KPCPSC
Trigger: GCAGGACGGGCAGGGCTTCCAGGAGAGCTCAAGCAC...GGTTGTCAAGGTGGGTCCCTTTGATGTGAGGTGCCATCCTCTGAGCCCAGGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
3UTR-3UTR CCA 90 bp ACCCTGGAGACCACTTCACCTGTTCCCTGGCACCTGGAGTTGCAGGGACACACCCCAGGACATCCGCTTTaGCCACTGAGGCCGATTCCT +
Preference number: 2 (lower is better)
Translates to: TLETTSPVPWHLELQGHTPGHPL*PLRPIP
Trigger: AGGAATCGGCCTCAGTGGCCAAAGCGGATGTCCTGG...GGTGTGTCCCTGCAACTCCAGGTGCCAGGGAACAGGTGAAGTGGTCTCCAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
3UTR-3UTR GCA 90 bp AGAGGATGGCACCTCACATCAAAGGGACCCACCTTGACAACCAGACCCTTCCCTAGCAGCAGGAGTTCCTaGTGGGACGAGGGAGGGGTC +
Preference number: 2 (lower is better)
Translates to: RGWHLTSKGPTLTTRPFPSSRSS*WDEGGV
Trigger: GACCCCTCCCTCGTCCCAGCAGGAACTCCTGCTGCT...AGGGAAGGGTCTGGTTGTCAAGGTGGGTCCCTTTGATGTGAGGTGCCATCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
3UTR-3UTR GCA 90 bp AGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGCAAAAGGCTGGGTTTaGCTCCTCCGAGCAGCCCCT +
Preference number: 2 (lower is better)
Translates to: SHNRKRLGLPPPSSPLNTAKGWV*LLRAAP
Trigger: AGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGC...CGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
3UTR-3UTR GCA 90 bp TTCTGGAAACAGCCCCTTTTGTTACCTCCACCCGCAACTCTGGGCTCCCTGGATTGGGTGTGCCTGGCCTaGAGAGCTGGGCACAGATGG +
Preference number: 2 (lower is better)
Translates to: FWKQPLLLPPPATLGSLDWVCLA*RAGHRW
Trigger: CCATCTGTGCCCAGCTCTGCAGGCCAGGCACACCCA...ATCCAGGGAGCCCAGAGTTGCGGGTGGAGGTAACAAAAGGGGCTGTTTCCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
3UTR-3UTR GCA 90 bp GGAGCCGCTGCTTCTGCATCCAGAATATGGGGCAGGAACCTGCCCATCCTCCTTTCTCCTGGGCAGTTCTaGCTGGTGTCTAACCGTGGG +
Preference number: 2 (lower is better)
Translates to: GAAASASRIWGRNLPILLSPGQF*LVSNRG
Trigger: CCCACGGTTAGACACCAGGCAGAACTGCCCAGGAGA...AAGGAGGATGGGCAGGTTCCTGCCCCATATTCTGGATGCAGAAGCAGCGGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
3UTR-3UTR CCA 90 bp CCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAGCAGGAGTTCCTGCTaGGACGAGGGAGGGGTCTTT +
Preference number: 2 (lower is better)
Translates to: PTSHNRKRLGLPPPSSPLSRSSC*DEGGVF
Trigger: AAAGACCCCTCCCTCGTCCCAGCAGGAACTCCTGCT...CAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
3UTR-3UTR TCA 90 bp TTCTGGAAACAGCCCCTTTTGTTACCTCCACCCGCAACTCTGGGCTCCCTGGATCACAGATGGCTGTTCTaGAGGTCGGGGGTGTCTGGG +
Preference number: 2 (lower is better)
Translates to: FWKQPLLLPPPATLGSLDHRWLF*RSGVSG
Trigger: CCCAGACACCCCCGACCTTCAGAACAGCCATCTGTG...ATCCAGGGAGCCCAGAGTTGCGGGTGGAGGTAACAAAAGGGGCTGTTTCCAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
3UTR-3UTR CCA 90 bp AGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGAGCAGGAGTTCCTGCTaGGACGAGGGAGGGGTCTTT +
Preference number: 2 (lower is better)
Translates to: SHNRKRLGLPPPSSPLNTSRSSC*DEGGVF
Trigger: AAAGACCCCTCCCTCGTCCCAGCAGGAACTCCTGCT...CGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
3UTR-3UTR CCA 90 bp GAAACAGCCCCTTTTGTTACCTCCACCCGCAACTCTGGGCTCCCTGGATTCCAACCTGGCCTGCAGAGCTaGGCACAGATGGCTGTTCTG +
Preference number: 2 (lower is better)
Translates to: ETAPFVTSTRNSGLPGFQPGLQS*AQMAVL
Trigger: CAGAACAGCCATCTGTGCCCAGCTCTGCAGGCCAGG...TTGGAATCCAGGGAGCCCAGAGTTGCGGGTGGAGGTAACAAAAGGGGCTGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
3UTR-3UTR CCA 90 bp TCGAGGTCTGGATTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTGTGCTTGAGCTCTCCTaGAAGCCCTGCCCGTCCTGC +
Preference number: 2 (lower is better)
Translates to: SRSGFPTSHNRKRLGLPPVLELS*KPCPSC
Trigger: GCAGGACGGGCAGGGCTTCCAGGAGAGCTCAAGCAC...AGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAATCCAGACCTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
3UTR-3UTR TCA 90 bp GGAGCCGCTGCTTCTGCATCCAGAATATGGGGCAGGAACCTGCCCATCCTCCTTATCCGCTTTGGCCACTaGGGCCGATTCCTTAGCAAA +
Preference number: 2 (lower is better)
Translates to: GAAASASRIWGRNLPILLIRFGH*GRFLSK
Trigger: TTTGCTAAGGAATCGGCCTCAGTGGCCAAAGCGGAT...AAGGAGGATGGGCAGGTTCCTGCCCCATATTCTGGATGCAGAAGCAGCGGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
3UTR-3UTR CCA 90 bp AGAGGATGGCACCTCACATCAAAGGGACCCACCTTGACAACCAGACCCTTCCCTAGCAGGAGTTCCTGCTaGGACGAGGGAGGGGTCTTT +
Preference number: 2 (lower is better)
Translates to: RGWHLTSKGPTLTTRPFPSRSSC*DEGGVF
Trigger: AAAGACCCCTCCCTCGTCCCAGCAGGAACTCCTGCT...AGGGAAGGGTCTGGTTGTCAAGGTGGGTCCCTTTGATGTGAGGTGCCATCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
3UTR-3UTR CCA 90 bp AAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCATAATCGCAAAAGGCTaGGTTTGCCTCCTCCGAGCA +
Preference number: 2 (lower is better)
Translates to: KRLGLPPPSSPLNTGSVSIIAKG*VCLLRA
Trigger: TGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTAT...GGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
3UTR-3UTR CCA 90 bp AATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTATAATCGCAAAAGGCTaGGTTTGCCTCCTCCGAGCA +
Preference number: 2 (lower is better)
Translates to: NRKRLGLPPPSSPLNTGSIIAKG*VCLLRA
Trigger: TGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTAT...ACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
3UTR-3UTR GCA 90 bp TGTGTTTTAATAAAACAGTGTCTCCCAGTTAAGTGGTGGGACAAACAGGAACCAGGTGTCTGGGCCCCTTaGTGTCCCCTCGGCTTCTAC +
Preference number: 2 (lower is better)
Translates to: CVLIKQCLPVKWWDKQEPGVWAP*CPLGFY
Trigger: GTAGAAGCCGAGGGGACAGCAAGGGGCCCAGACACC...TGGTTCCTGTTTGTCCCACCACTTAACTGGGAGACACTGTTTTATTAAAACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
3UTR-3UTR GCA 90 bp TGTGTTTTAATAAAACAGTGTCTCCCAGTTAAGTGGTGGGACAAACAGGAACCATGGGTGTGCCTGGCCTaGAGAGCTGGGCACAGATGG +
Preference number: 2 (lower is better)
Translates to: CVLIKQCLPVKWWDKQEPWVCLA*RAGHRW
Trigger: CCATCTGTGCCCAGCTCTGCAGGCCAGGCACACCCA...TGGTTCCTGTTTGTCCCACCACTTAACTGGGAGACACTGTTTTATTAAAACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
3UTR-3UTR GCA 90 bp TGTGTTTTAATAAAACAGTGTCTCCCAGTTAAGTGGTGGGACAAACAGGAACCATCGGAGCCCCCGGAGTaGTTGAGCTCTCCTGGAAGC +
Preference number: 2 (lower is better)
Translates to: CVLIKQCLPVKWWDKQEPSEPPE*LSSPGS
Trigger: GCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGA...TGGTTCCTGTTTGTCCCACCACTTAACTGGGAGACACTGTTTTATTAAAACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
3UTR TCA 72 bp CCAGGGCTCAGGCTGTCTCGGAGCCCCCGGAGTGCTTaGGCTCTCCTGGAAGCCCTGCCCGTCCTGCCCGTC +
Preference number: 3 (lower is better)
Translates to: PGLRLSRSPRSA*ALLEALPVLPV
Trigger: GACGGGCAGGACGGGCAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGAGACAGCCTGAGCCCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
3UTR CCA 72 bp GGGAGCCGGCCGGGCATCCCTCAAGACCCAGGGGCTTaGTCAGCCCCTGCCCGAGTGGACACATCCACTCCC +
Preference number: 3 (lower is better)
Translates to: GSRPGIPQDPGA*SAPARVDTSTP
Trigger: GGGAGTGGATGTGTCCACTCGGGCAGGGGCTGACCAAGCCCCTGGGTCTTGAGGGATGCCCGGCCGGCTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
3UTR-3UTR CAA 90 bp GGACAAACAGGAACCACCGGGTGGATGGTCGGCCGTGCCCACCCGCCTCAGGCTCCTCCGAGCAGCCCCTaGAACACGGGCAGTGTGTCC +
Preference number: 3 (lower is better)
Translates to: GQTGTTGWMVGRAHPPQAPPSSP*NTGSVS
Trigger: GGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGG...AGCCTGAGGCGGGTGGGCACGGCCGACCATCCACCCGGTGGTTCCTGTTTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
3UTR-3UTR CAA 90 bp GTGGGACAAACAGGAACCACCGGGTGGATGGTCGGCCGTGCCCACCCGCCTCAGCGCAAAAGGCTGGGTTaGCCTCCTCCGAGCAGCCCC +
Preference number: 3 (lower is better)
Translates to: VGQTGTTGWMVGRAHPPQRKRLG*PPPSSP
Trigger: GGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCG...CTGAGGCGGGTGGGCACGGCCGACCATCCACCCGGTGGTTCCTGTTTGTCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
3UTR-3UTR CAA 90 bp GCAATCCGGCGACAAAGCCACAACCACAGACGGTCTCCGGGACCCACAGGCCCCACGAGGGAGGGGTCTTaGGGTGAGCCTGGGGAGCCT +
Preference number: 3 (lower is better)
Translates to: AIRRQSHNHRRSPGPTGPTREGS*GEPGEP
Trigger: AGGCTCCCCAGGCTCACCCAAAGACCCCTCCCTCGT...GGGGCCTGTGGGTCCCGGAGACCGTCTGTGGTTGTGGCTTTGTCGCCGGATTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
3UTR-3UTR CAA 90 bp CTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCCGCAAAAGGCTGGGTTaGCCTCCTCCGAGCAGCCCC +
Preference number: 3 (lower is better)
Translates to: LGLPPPSSPLNTGSVSPSRKRLG*PPPSSP
Trigger: GGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCG...GGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
3UTR TCA 72 bp TGCCTGGCCTGCAGAGCTGGGCACAGATGGCTGTTCTaGAGGTCGGGGGTGTCTGGGCCCCTTGCTGTCCCC +
Preference number: 3 (lower is better)
Translates to: CLACRAGHRWLF*RSGVSGPLAVP
Trigger: GGGGACAGCAAGGGGCCCAGACACCCCCGACCTTCAGAACAGCCATCTGTGCCCAGCTCTGCAGGCCAGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
3UTR GCA 72 bp GCGTGGGACCCCGCAAAGCCAGGCACGTCCTTGCGTTaGCTTTGCAGTGGACAGACAGCAGCGGCTGGGGGA +
Preference number: 3 (lower is better)
Translates to: AWDPAKPGTSLR*LCSGQTAAAGG
Trigger: TCCCCCAGCCGCTGCTGTCTGTCCACTGCAAAGGCAACGCAAGGACGTGCCTGGCTTTGCGGGGTCCCACGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
3UTR CCA 72 bp CTTGCGTTGCCTTTGCAGTGGACAGACAGCAGCGGCTaGGGGAGATCGGCCTGTGCGGTGTCCCCCGTCAGA +
Preference number: 3 (lower is better)
Translates to: LALPLQWTDSSG*GRSACAVSPVR
Trigger: TCTGACGGGGGACACCGCACAGGCCGATCTCCCCCAGCCGCTGCTGTCTGTCCACTGCAAAGGCAACGCAAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
3UTR CCA 72 bp GTTAAGTGGTGGGACAAACAGGAACCACCGGGTGGATaGTCGGCCGTGCCCACCCGCCTCAGGCTAACCTCG +
Preference number: 3 (lower is better)
Translates to: VKWWDKQEPPGG*SAVPTRLRLTS
Trigger: CGAGGTTAGCCTGAGGCGGGTGGGCACGGCCGACCATCCACCCGGTGGTTCCTGTTTGTCCCACCACTTAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
3UTR CCA 72 bp CGCAAAGCCAGGCACGTCCTTGCGTTGCCTTTGCAGTaGACAGACAGCAGCGGCTGGGGGAGATCGGCCTGT +
Preference number: 3 (lower is better)
Translates to: RKARHVLALPLQ*TDSSGWGRSAC
Trigger: ACAGGCCGATCTCCCCCAGCCGCTGCTGTCTGTCCACTGCAAAGGCAACGCAAGGACGTGCCTGGCTTTGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
3UTR-3UTR CAA 90 bp GGCTCCCTTCAGCTCTGCAATCCGGCGACAAAGCCACAACCACAGACGGTCTCCACGAGGGAGGGGTCTTaGGGTGAGCCTGGGGAGCCT +
Preference number: 3 (lower is better)
Translates to: GSLQLCNPATKPQPQTVSTREGS*GEPGEP
Trigger: AGGCTCCCCAGGCTCACCCAAAGACCCCTCCCTCGT...GGAGACCGTCTGTGGTTGTGGCTTTGTCGCCGGATTGCAGAGCTGAAGGGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
3UTR-3UTR CAA 90 bp CACCTTGACAACCAGACCCTTCCCTCCCCGTGGGGTTTCGAGGTCTGGATTCCCACGAGGGAGGGGTCTTaGGGTGAGCCTGGGGAGCCT +
Preference number: 3 (lower is better)
Translates to: HLDNQTLPSPWGFEVWIPTREGS*GEPGEP
Trigger: AGGCTCCCCAGGCTCACCCAAAGACCCCTCCCTCGT...GGGAATCCAGACCTCGAAACCCCACGGGGAGGGAAGGGTCTGGTTGTCAAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
3UTR-3UTR CAA 90 bp CACCTTGACAACCAGACCCTTCCCTCCCCGTGGGGTTTCGAGGTCTGGATTCCCCGCAAAAGGCTGGGTTaGCCTCCTCCGAGCAGCCCC +
Preference number: 3 (lower is better)
Translates to: HLDNQTLPSPWGFEVWIPRKRLG*PPPSSP
Trigger: GGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCG...GGGAATCCAGACCTCGAAACCCCACGGGGAGGGAAGGGTCTGGTTGTCAAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
3UTR-3UTR CAA 90 bp GGCTCCCTTCAGCTCTGCAATCCGGCGACAAAGCCACAACCACAGACGGTCTCCGGGTGTCTGGGCCCCTaGCTGTCCCCTCGGCTTCTA +
Preference number: 3 (lower is better)
Translates to: GSLQLCNPATKPQPQTVSGCLGP*LSPRLL
Trigger: TAGAAGCCGAGGGGACAGCAAGGGGCCCAGACACCC...GGAGACCGTCTGTGGTTGTGGCTTTGTCGCCGGATTGCAGAGCTGAAGGGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
3UTR-3UTR CAA 90 bp CTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCAGGCAGCAGCCCCTTTaGGCCCCCATGATTCACCAA +
Preference number: 3 (lower is better)
Translates to: LGLPPPSSPLNTGSVSPSRQQPL*APMIHQ
Trigger: TTGGTGAATCATGGGGGCCAAAAGGGGCTGCTGCCT...GGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
3UTR-3UTR CAA 90 bp GCCTGCAGGAGATGGGGAGGTTCCAGGCGCCCAGGACATCCGCTTTGGCCACTGAGGCAGCAGCCCCTTTaGGCCCCCATGATTCACCAA +
Preference number: 3 (lower is better)
Translates to: ACRRWGGSRRPGHPLWPLRQQPL*APMIHQ
Trigger: TTGGTGAATCATGGGGGCCAAAAGGGGCTGCTGCCT...CAGTGGCCAAAGCGGATGTCCTGGGCGCCTGGAACCTCCCCATCTCCTGCAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
3UTR-3UTR CAA 90 bp ACCCTGGAGACCACTTCACCTGTTCCCTGGCACCTGGAGTTGCAGGGACACACCTCAAGACCCAGGGGCTaGGTCAGCCCCTGCCCGAGT +
Preference number: 3 (lower is better)
Translates to: TLETTSPVPWHLELQGHTSRPRG*VSPCPS
Trigger: ACTCGGGCAGGGGCTGACCAAGCCCCTGGGTCTTGA...GGTGTGTCCCTGCAACTCCAGGTGCCAGGGAACAGGTGAAGTGGTCTCCAGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
3UTR-3UTR CAA 90 bp TTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCACGAGGGAGGGGTCTTaGGGTGAGCCTGGGGAGCCT +
Preference number: 3 (lower is better)
Translates to: FPTSHNRKRLGLPPPSSPTREGS*GEPGEP
Trigger: AGGCTCCCCAGGCTCACCCAAAGACCCCTCCCTCGT...GGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
3UTR-3UTR CAA 90 bp TTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCCGCAAAAGGCTGGGTTaGCCTCCTCCGAGCAGCCCC +
Preference number: 3 (lower is better)
Translates to: FPTSHNRKRLGLPPPSSPRKRLG*PPPSSP
Trigger: GGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCG...GGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
3UTR-3UTR CAA 90 bp TCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCTCAAGAGGGTGAGGCAGCAGCCCCTTTaGGCCCCCATGATTCACCAA +
Preference number: 3 (lower is better)
Translates to: SSEQPLEHGQCVPLLKRVRQQPL*APMIHQ
Trigger: TTGGTGAATCATGGGGGCCAAAAGGGGCTGCTGCCT...CACCCTCTTGAGGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
3UTR TCA 72 bp CCCACCCGCCTCAGGCTAACCTCGAGGACGCTGGTCTaGTTGTCCCTGTGTCTCTCCTGGGCAGTTCTGCCT +
Preference number: 3 (lower is better)
Translates to: PTRLRLTSRTLV*LSLCLSWAVLP
Trigger: AGGCAGAACTGCCCAGGAGAGACACAGGGACAATCAGACCAGCGTCCTCGAGGTTAGCCTGAGGCGGGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
3UTR-3UTR CAA 90 bp AGACCTGGGCTCAGAGGATGGCACCTCACATCAAAGGGACCCACCTTGACAACCACGAGGGAGGGGTCTTaGGGTGAGCCTGGGGAGCCT +
Preference number: 3 (lower is better)
Translates to: RPGLRGWHLTSKGPTLTTTREGS*GEPGEP
Trigger: AGGCTCCCCAGGCTCACCCAAAGACCCCTCCCTCGT...GGTTGTCAAGGTGGGTCCCTTTGATGTGAGGTGCCATCCTCTGAGCCCAGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
3UTR-3UTR CAA 90 bp GAGGGGTCTTTGGGTGAGCCTGGGGAGCCTCAACTGTTAGCAGTCGAATCCTCTGAGCCCCCGGAGTGCTaGAGCTCTCCTGGAAGCCCT +
Preference number: 3 (lower is better)
Translates to: EGSLGEPGEPQLLAVESSEPPEC*SSPGSP
Trigger: AGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTC...AGAGGATTCGACTGCTAACAGTTGAGGCTCCCCAGGCTCACCCAAAGACCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
3UTR-3UTR CAA 90 bp ACCCTGGAGACCACTTCACCTGTTCCCTGGCACCTGGAGTTGCAGGGACACACCAGAGGCCCCTGGTGTTaGTCATCCACAGGGCTCCCT +
Preference number: 3 (lower is better)
Translates to: TLETTSPVPWHLELQGHTRGPWC*SSTGLP
Trigger: AGGGAGCCCTGTGGATGACAAACACCAGGGGCCTCT...GGTGTGTCCCTGCAACTCCAGGTGCCAGGGAACAGGTGAAGTGGTCTCCAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
3UTR-3UTR CAA 90 bp TCTGGGAGCCGCTGCTTCTGCATCCAGAATATGGGGCAGGAACCTGCCCATCCTCCCTGGCACCTGGAGTaGCAGGGACACACCCTGACT +
Preference number: 3 (lower is better)
Translates to: SGSRCFCIQNMGQEPAHPPWHLE*QGHTLT
Trigger: AGTCAGGGTGTGTCCCTGCAACTCCAGGTGCCAGGG...AGGATGGGCAGGTTCCTGCCCCATATTCTGGATGCAGAAGCAGCGGCTCCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
3UTR-3UTR CAA 90 bp AGAGGATGGCACCTCACATCAAAGGGACCCACCTTGACAACCAGACCCTTCCCTCCTCCGAGCAGCCCCTaGAACACGGGCAGTGTGTCC +
Preference number: 3 (lower is better)
Translates to: RGWHLTSKGPTLTTRPFPPPSSP*NTGSVS
Trigger: GGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGG...AGGGAAGGGTCTGGTTGTCAAGGTGGGTCCCTTTGATGTGAGGTGCCATCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
3UTR-3UTR CAA 90 bp GAAACAGCCCCTTTTGTTACCTCCACCCGCAACTCTGGGCTCCCTGGATTCCAACCTCCGAGCAGCCCCTaGAACACGGGCAGTGTGTCC +
Preference number: 3 (lower is better)
Translates to: ETAPFVTSTRNSGLPGFQPPSSP*NTGSVS
Trigger: GGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGG...TTGGAATCCAGGGAGCCCAGAGTTGCGGGTGGAGGTAACAAAAGGGGCTGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
3UTR-3UTR CAA 90 bp AGAGGATGGCACCTCACATCAAAGGGACCCACCTTGACAACCAGACCCTTCCCTCGCAAAAGGCTGGGTTaGCCTCCTCCGAGCAGCCCC +
Preference number: 3 (lower is better)
Translates to: RGWHLTSKGPTLTTRPFPRKRLG*PPPSSP
Trigger: GGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCG...AGGGAAGGGTCTGGTTGTCAAGGTGGGTCCCTTTGATGTGAGGTGCCATCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
3UTR-3UTR CAA 90 bp CAGGGCTCCCTTCAGCTCTGCAATCCGGCGACAAAGCCACAACCACAGACGGTCAGGCAGCAGCCCCTTTaGGCCCCCATGATTCACCAA +
Preference number: 3 (lower is better)
Translates to: QGSLQLCNPATKPQPQTVRQQPL*APMIHQ
Trigger: TTGGTGAATCATGGGGGCCAAAAGGGGCTGCTGCCT...GACCGTCTGTGGTTGTGGCTTTGTCGCCGGATTGCAGAGCTGAAGGGAGCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
3UTR CCA 72 bp CTGGAAGTGACCCTGGAGACCACTTCACCTGTTCCCTaGCACCTGGAGTTGCAGGGACACACCCTGACTGCA +
Preference number: 3 (lower is better)
Translates to: LEVTLETTSPVP*HLELQGHTLTA
Trigger: TGCAGTCAGGGTGTGTCCCTGCAACTCCAGGTGCCAGGGAACAGGTGAAGTGGTCTCCAGGGTCACTTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
3UTR TCA 72 bp TCAGAGGATGGCACCTCACATCAAAGGGACCCACCTTaGCAACCAGACCCTTCCCTCCCCGTGGGGTTTCGA +
Preference number: 3 (lower is better)
Translates to: SEDGTSHQRDPP*QPDPSLPVGFR
Trigger: TCGAAACCCCACGGGGAGGGAAGGGTCTGGTTGTCAAGGTGGGTCCCTTTGATGTGAGGTGCCATCCTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
3UTR GCA 72 bp CCTGGTGTTTGTCATCCACAGGGCTCCCTTCAGCTCTaGAATCCGGCGACAAAGCCACAACCACAGACGGTC +
Preference number: 3 (lower is better)
Translates to: PGVCHPQGSLQL*NPATKPQPQTV
Trigger: GACCGTCTGTGGTTGTGGCTTTGTCGCCGGATTGCAGAGCTGAAGGGAGCCCTGTGGATGACAAACACCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
3UTR GCA 72 bp TGGTCTGATTGTCCCTGTGTCTCTCCTGGGCAGTTCTaGCTGGTGTCTAACCGTGGGCCTCCCTGCTTTGTT +
Preference number: 3 (lower is better)
Translates to: WSDCPCVSPGQF*LVSNRGPPCFV
Trigger: AACAAAGCAGGGAGGCCCACGGTTAGACACCAGGCAGAACTGCCCAGGAGAGACACAGGGACAATCAGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
3UTR CCA 72 bp CCCTTTTGTTACCTCCACCCGCAACTCTGGGCTCCCTaGATTCCAAAGCTGGAAGTGACCCTGGAGACCACT +
Preference number: 3 (lower is better)
Translates to: PFCYLHPQLWAP*IPKLEVTLETT
Trigger: AGTGGTCTCCAGGGTCACTTCCAGCTTTGGAATCCAGGGAGCCCAGAGTTGCGGGTGGAGGTAACAAAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
3UTR CCA 72 bp GGAAACAGCCCCTTTTGTTACCTCCACCCGCAACTCTaGGCTCCCTGGATTCCAAAGCTGGAAGTGACCCTG +
Preference number: 3 (lower is better)
Translates to: GNSPFCYLHPQL*APWIPKLEVTL
Trigger: CAGGGTCACTTCCAGCTTTGGAATCCAGGGAGCCCAGAGTTGCGGGTGGAGGTAACAAAAGGGGCTGTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
3UTR-3UTR CAA 90 bp TGTGTTTTAATAAAACAGTGTCTCCCAGTTAAGTGGTGGGACAAACAGGAACCAGGGTGTCTGGGCCCCTaGCTGTCCCCTCGGCTTCTA +
Preference number: 3 (lower is better)
Translates to: CVLIKQCLPVKWWDKQEPGCLGP*LSPRLL
Trigger: TAGAAGCCGAGGGGACAGCAAGGGGCCCAGACACCC...TGGTTCCTGTTTGTCCCACCACTTAACTGGGAGACACTGTTTTATTAAAACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
3UTR-3UTR CAA 90 bp TGTGTTTTAATAAAACAGTGTCTCCCAGTTAAGTGGTGGGACAAACAGGAACCAGAGCCCCCGGAGTGCTaGAGCTCTCCTGGAAGCCCT +
Preference number: 3 (lower is better)
Translates to: CVLIKQCLPVKWWDKQEPEPPEC*SSPGSP
Trigger: AGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTC...TGGTTCCTGTTTGTCCCACCACTTAACTGGGAGACACTGTTTTATTAAAACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
3UTR CCA 72 bp CGGTGTGTTTTAATAAAACAGTGTCTCCCAGTTAAGTaGTGGGACAAACAGGAACCACCGGGTGGATGGTCG +
Preference number: 3 (lower is better)
Translates to: RCVLIKQCLPVK*WDKQEPPGGWS
Trigger: CGACCATCCACCCGGTGGTTCCTGTTTGTCCCACCACTTAACTGGGAGACACTGTTTTATTAAAACACACCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR TCA 90 bp ACGGTGATGGCCGGGCCAGGCCCTAGCAGCAGCAGGAGTTCCTGCTGGGACGAGGGCCGCGCCAGCAGGTaGGGGCCACGTGCCGCAGGT +
Preference number: 4 (lower is better)
Translates to: TVMAGPGPSSSRSSCWDEGRASR*GPRAAG
Trigger: ACCTGCGGCACGTGGCCCTCACCTGCTGGCGCGGCC...CTCGTCCCAGCAGGAACTCCTGCTGCTGCTAGGGCCTGGCCCGGCCATCACCGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR GCA 90 bp ACGGTGATGGCCGGGCCAGGCCCTAGCAGCAGCAGGAGTTCCTGCTGGGACGAGCCTCCCTCTCTGCCCTaGACACCCGCGGGCCCCACG +
Preference number: 4 (lower is better)
Translates to: TVMAGPGPSSSRSSCWDEPPSLP*TPAGPT
Trigger: CGTGGGGCCCGCGGGTGTGCAGGGCAGAGAGGGAGG...CTCGTCCCAGCAGGAACTCCTGCTGCTGCTAGGGCCTGGCCCGGCCATCACCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR GCA 90 bp GCTGTCTCGGAGCCCCCGGAGTGCTTGAGCTCTCCTGGAAGCCCTGCCCGTCCTCCTCCCTCTCTGCCCTaGACACCCGCGGGCCCCACG +
Preference number: 4 (lower is better)
Translates to: AVSEPPECLSSPGSPARPPPSLP*TPAGPT
Trigger: CGTGGGGCCCGCGGGTGTGCAGGGCAGAGAGGGAGG...AGGACGGGCAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGAGACAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR GCA 90 bp GGCTCAGGCTGTCTCGGAGCCCCCGGAGTGCTTGAGCTCTCCTGGAAGCCCTGCGTCCTCCAGTGCCGTTaGCACGGGCTTGGCCCGGCC +
Preference number: 4 (lower is better)
Translates to: GSGCLGAPGVLELSWKPCVLQCR*HGLGPA
Trigger: GGCCGGGCCAAGCCCGTGGCAACGGCACTGGAGGAC...GCAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGAGACAGCCTGAGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR CCA 90 bp ACGGTGATGGCCGGGCCAGGCCCTAGCAGCAGCAGGAGTTCCTGCTGGGACGAGTTGGCCTCTGGGCGGTaGTGCTCCGGCCGGCTCCGT +
Preference number: 4 (lower is better)
Translates to: TVMAGPGPSSSRSSCWDELASGR*CSGRLR
Trigger: ACGGAGCCGGCCGGAGCACCACCGCCCAGAGGCCAA...CTCGTCCCAGCAGGAACTCCTGCTGCTGCTAGGGCCTGGCCCGGCCATCACCGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp GTGGGACAAACAGGAACCACCGGGTGGATGGTCGGCCGTGCCCACCCGCCTCAGCGCCTCGAGGTCCTCTaGGGCTTGGCCTCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: VGQTGTTGWMVGRAHPPQRLEVL*GLASGR
Trigger: CCGCCCAGAGGCCAAGCCCCAGAGGACCTCGAGGCG...CTGAGGCGGGTGGGCACGGCCGACCATCCACCCGGTGGTTCCTGTTTGTCCCAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR CCA 90 bp ACGGTGATGGCCGGGCCAGGCCCTAGCAGCAGCAGGAGTTCCTGCTGGGACGAGGGCCCCGGGCTCAGCTaGGTGTGCCTGGCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: TVMAGPGPSSSRSSCWDEGPGLS*VCLACR
Trigger: TCTGCAGGCCAGGCACACCCAGCTGAGCCCGGGGCC...CTCGTCCCAGCAGGAACTCCTGCTGCTGCTAGGGCCTGGCCCGGCCATCACCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp GGCTCAGGCTGTCTCGGAGCCCCCGGAGTGCTTGAGCTCTCCTGGAAGCCCTGCGCTGGTGGGTGGTGCTaGCTGGCCCCGGGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: GSGCLGAPGVLELSWKPCAGGWC*LAPGSA
Trigger: AGCTGAGCCCGGGGCCAGCCAGCACCACCCACCAGC...GCAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGAGACAGCCTGAGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR CCA 90 bp GCTGTCTCGGAGCCCCCGGAGTGCTTGAGCTCTCCTGGAAGCCCTGCCCGTCCTCCCACAGGCCCCAGCTaGTGGGTGGTGCTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: AVSEPPECLSSPGSPARPPTGPS*WVVLAG
Trigger: GCCAGCCAGCACCACCCACCAGCTGGGGCCTGTGGG...AGGACGGGCAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGAGACAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR CCA 90 bp GCTCAGGCTGTCTCGGAGCCCCCGGAGTGCTTGAGCTCTCCTGGAAGCCCTGCCGAACCACCGGGTGGATaGTCGGCCGTGCCCACCCGC +
Preference number: 4 (lower is better)
Translates to: AQAVSEPPECLSSPGSPAEPPGG*SAVPTR
Trigger: GCGGGTGGGCACGGCCGACCATCCACCCGGTGGTTC...GGCAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGAGACAGCCTGAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR TCA 90 bp ACGGTGATGGCCGGGCCAGGCCCTAGCAGCAGCAGGAGTTCCTGCTGGGACGAGACAGGAGGGCTGTGCTaGCTAGTGTGGCGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: TVMAGPGPSSSRSSCWDETGGLC*LVWRGR
Trigger: GCGGCCCCGCCACACTAGTCAGCACAGCCCTCCTGT...CTCGTCCCAGCAGGAACTCCTGCTGCTGCTAGGGCCTGGCCCGGCCATCACCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR TCA 90 bp GGACAAACAGGAACCACCGGGTGGATGGTCGGCCGTGCCCACCCGCCTCAGGCTACAGGAGGGCTGTGCTaGCTAGTGTGGCGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: GQTGTTGWMVGRAHPPQATGGLC*LVWRGR
Trigger: GCGGCCCCGCCACACTAGTCAGCACAGCCCTCCTGT...AGCCTGAGGCGGGTGGGCACGGCCGACCATCCACCCGGTGGTTCCTGTTTGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR TCA 90 bp ACGGTGATGGCCGGGCCAGGCCCTAGCAGCAGCAGGAGTTCCTGCTGGGACGAGAGAGGGTGCACACGGTaGTGGCCGGGCCAGGCCCTA +
Preference number: 4 (lower is better)
Translates to: TVMAGPGPSSSRSSCWDERGCTR*WPGQAL
Trigger: TAGGGCCTGGCCCGGCCATCACCGTGTGCACCCTCT...CTCGTCCCAGCAGGAACTCCTGCTGCTGCTAGGGCCTGGCCCGGCCATCACCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR TCA 90 bp GCAATCCGGCGACAAAGCCACAACCACAGACGGTCTCCGGGACCCACAGGCCCCGCCGGCCGGGCACCCTaGCAGTGGCTGTGGCGTTCT +
Preference number: 4 (lower is better)
Translates to: AIRRQSHNHRRSPGPTGPAGRAP*QWLWRS
Trigger: AGAACGCCACAGCCACTGTCAGGGTGCCCGGCCGGC...GGGGCCTGTGGGTCCCGGAGACCGTCTGTGGTTGTGGCTTTGTCGCCGGATTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR GCA 90 bp TCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCTCAAGAGGGTGCACCCTCCCTCTCTGCCCTaGACACCCGCGGGCCCCACG +
Preference number: 4 (lower is better)
Translates to: SEQPLEHGQCVPLLKRVHPPSLP*TPAGPT
Trigger: CGTGGGGCCCGCGGGTGTGCAGGGCAGAGAGGGAGG...GTGCACCCTCTTGAGGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR GCA 90 bp GGCTCAGGCTGTCTCGGAGCCCCCGGAGTGCTTGAGCTCTCCTGGAAGCCCTGCGTTGTCCTCCCTCTCTaGCCTGCACACCCGCGGGCC +
Preference number: 4 (lower is better)
Translates to: GSGCLGAPGVLELSWKPCVVLPL*PAHPRA
Trigger: GGCCCGCGGGTGTGCAGGGCAGAGAGGGAGGACAAC...GCAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGAGACAGCCTGAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR GCA 90 bp CTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCGCCTCTGGGCGGTGGTaGTCCGGCCGGCTCCGTTTC +
Preference number: 4 (lower is better)
Translates to: LGLPPPSSPLNTGSVSPSASGRW*SGRLRF
Trigger: GAAACGGAGCCGGCCGGAGCACCACCGCCCAGAGGC...GGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR GCA 90 bp GCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCTCAAGAGGGTCCTCCAGTGCCGTTaGCACGGGCTTGGCCCGGCC +
Preference number: 4 (lower is better)
Translates to: ASSEQPLEHGQCVPLLKRVLQCR*HGLGPA
Trigger: GGCCGGGCCAAGCCCGTGGCAACGGCACTGGAGGAC...CCTCTTGAGGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR GCA 90 bp GCCTGCAGGAGATGGGGAGGTTCCAGGCGCCCAGGACATCCGCTTTGGCCACTGGTCCTCCAGTGCCGTTaGCACGGGCTTGGCCCGGCC +
Preference number: 4 (lower is better)
Translates to: ACRRWGGSRRPGHPLWPLVLQCR*HGLGPA
Trigger: GGCCGGGCCAAGCCCGTGGCAACGGCACTGGAGGAC...CAGTGGCCAAAGCGGATGTCCTGGGCGCCTGGAACCTCCCCATCTCCTGCAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR GCA 90 bp GCTGTCTCGGAGCCCCCGGAGTGCTTGAGCTCTCCTGGAAGCCCTGCCCGTCCTCCGCAGGTCCTCCAGTaGCGTTGCCACGGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: AVSEPPECLSSPGSPARPPQVLQ*RCHGLG
Trigger: GCCAAGCCCGTGGCAACGGCACTGGAGGACCTGCGG...AGGACGGGCAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGAGACAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR GCA 90 bp GTGGGACAAACAGGAACCACCGGGTGGATGGTCGGCCGTGCCCACCCGCCTCAGCCGCAGGTCCTCCAGTaGCGTTGCCACGGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: VGQTGTTGWMVGRAHPPQPQVLQ*RCHGLG
Trigger: GCCAAGCCCGTGGCAACGGCACTGGAGGACCTGCGG...CTGAGGCGGGTGGGCACGGCCGACCATCCACCCGGTGGTTCCTGTTTGTCCCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR GCA 90 bp GCTCAGGCTGTCTCGGAGCCCCCGGAGTGCTTGAGCTCTCCTGGAAGCCCTGCCCCGCAGGTCCTCCAGTaGCGTTGCCACGGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: AQAVSEPPECLSSPGSPAPQVLQ*RCHGLG
Trigger: GCCAAGCCCGTGGCAACGGCACTGGAGGACCTGCGG...GGCAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGAGACAGCCTGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR GCA 90 bp ACGGTGATGGCCGGGCCAGGCCCTAGCAGCAGCAGGAGTTCCTGCTGGGACGAGCGGGGCCGCCTGCTGTaGCCCCCATGTCCGATCTCA +
Preference number: 4 (lower is better)
Translates to: TVMAGPGPSSSRSSCWDERGRLL*PPCPIS
Trigger: TGAGATCGGACATGGGGGGCACAGCAGGCGGCCCCG...CTCGTCCCAGCAGGAACTCCTGCTGCTGCTAGGGCCTGGCCCGGCCATCACCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp GCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCTCAAGAGGCCGAGGGCTCTGATCTaGAGGCGCCACCGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: ASSEQPLEHGQCVPLLKRPRALI*RRHRPL
Trigger: CAGCGGGCGGTGGCGCCTCCAGATCAGAGCCCTCGG...CCTCTTGAGGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331952.6
ENST00000557649.6
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp CTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCCGCCTCGAGGTCCTCTaGGGCTTGGCCTCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: LGLPPPSSPLNTGSVSPSRLEVL*GLASGR
Trigger: CCGCCCAGAGGCCAAGCCCCAGAGGACCTCGAGGCG...GGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp GGCTCAGGCTGTCTCGGAGCCCCCGGAGTGCTTGAGCTCTCCTGGAAGCCCTGCCCGTTGCCACGGGCTTaGCCCGGCCGCAGTATAGGC +
Preference number: 4 (lower is better)
Translates to: GSGCLGAPGVLELSWKPCPLPRA*PGRSIG
Trigger: GCCTATACTGCGGCCGGGCCAAGCCCGTGGCAACGG...GCAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGAGACAGCCTGAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR CCA 90 bp GCCTGCAGGAGATGGGGAGGTTCCAGGCGCCCAGGACATCCGCTTTGGCCACTGGCTGGTGGGTGGTGCTaGCTGGCCCCGGGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: ACRRWGGSRRPGHPLWPLAGGWC*LAPGSA
Trigger: AGCTGAGCCCGGGGCCAGCCAGCACCACCCACCAGC...CAGTGGCCAAAGCGGATGTCCTGGGCGCCTGGAACCTCCCCATCTCCTGCAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CCA 90 bp ACGGTGATGGCCGGGCCAGGCCCTAGCAGCAGCAGGAGTTCCTGCTGGGACGAGGGACAGCCCGGTCCATaGGGAGGCCGTCAACCACGG +
Preference number: 4 (lower is better)
Translates to: TVMAGPGPSSSRSSCWDEGQPGP*GGRQPR
Trigger: CCGTGGTTGACGGCCTCCCCATGGACCGGGCTGTCC...CTCGTCCCAGCAGGAACTCCTGCTGCTGCTAGGGCCTGGCCCGGCCATCACCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR CCA 90 bp GCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCTCAAGAGGGAACCACCGGGTGGATaGTCGGCCGTGCCCACCCGC +
Preference number: 4 (lower is better)
Translates to: ASSEQPLEHGQCVPLLKREPPGG*SAVPTR
Trigger: GCGGGTGGGCACGGCCGACCATCCACCCGGTGGTTC...CCTCTTGAGGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR CCA 90 bp GCCTGCAGGAGATGGGGAGGTTCCAGGCGCCCAGGACATCCGCTTTGGCCACTGGAACCACCGGGTGGATaGTCGGCCGTGCCCACCCGC +
Preference number: 4 (lower is better)
Translates to: ACRRWGGSRRPGHPLWPLEPPGG*SAVPTR
Trigger: GCGGGTGGGCACGGCCGACCATCCACCCGGTGGTTC...CAGTGGCCAAAGCGGATGTCCTGGGCGCCTGGAACCTCCCCATCTCCTGCAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
3UTR CAA 72 bp AGGGAGCCGGCCGGGCATCCCTCAAGACCCAGGGGCTaGGTCAGCCCCTGCCCGAGTGGACACATCCACTCC +
Preference number: 4 (lower is better)
Translates to: REPAGHPSRPRG*VSPCPSGHIHS
Trigger: GGAGTGGATGTGTCCACTCGGGCAGGGGCTGACCAAGCCCCTGGGTCTTGAGGGATGCCCGGCCGGCTCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR TCA 90 bp AAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCGGCCGCGCCAGCAGGTaGGGGCCACGTGCCGCAGGT +
Preference number: 4 (lower is better)
Translates to: KRLGLPPPSSPLNTGSVSGRASR*GPRAAG
Trigger: ACCTGCGGCACGTGGCCCTCACCTGCTGGCGCGGCC...GGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR TCA 90 bp GGACAAACAGGAACCACCGGGTGGATGGTCGGCCGTGCCCACCCGCCTCAGGCTAGCCCCCGGAGTGCTTaGGCTCTCCTGGAAGCCCTG +
Preference number: 4 (lower is better)
Translates to: GQTGTTGWMVGRAHPPQASPRSA*ALLEAL
Trigger: CAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCT...AGCCTGAGGCGGGTGGGCACGGCCGACCATCCACCCGGTGGTTCCTGTTTGTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR TCA 90 bp GGCTCAGGCTGTCTCGGAGCCCCCGGAGTGCTTGAGCTCTCCTGGAAGCCCTGCAGCCCCCGGAGTGCTTaGGCTCTCCTGGAAGCCCTG +
Preference number: 4 (lower is better)
Translates to: GSGCLGAPGVLELSWKPCSPRSA*ALLEAL
Trigger: CAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCT...GCAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGAGACAGCCTGAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR TCA 90 bp ACGGTGATGGCCGGGCCAGGCCCTAGCAGCAGCAGGAGTTCCTGCTGGGACGAGCTCCGAGCAGCCCCTTaGACACGGGCAGTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: TVMAGPGPSSSRSSCWDELRAAP*TRAVCP
Trigger: GGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAG...CTCGTCCCAGCAGGAACTCCTGCTGCTGCTAGGGCCTGGCCCGGCCATCACCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR TCA 90 bp GCTGTCTCGGAGCCCCCGGAGTGCTTGAGCTCTCCTGGAAGCCCTGCCCGTCCTCCATTACGGCGACACTaGGCAGTGGCCTCAGCGGCC +
Preference number: 4 (lower is better)
Translates to: AVSEPPECLSSPGSPARPPLRRH*AVASAA
Trigger: GGCCGCTGAGGCCACTGCTCAGTGTCGCCGTAATGG...AGGACGGGCAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGAGACAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR TCA 90 bp GTGGGACAAACAGGAACCACCGGGTGGATGGTCGGCCGTGCCCACCCGCCTCAGGGGGTGGCTCAGGCCTaGTCAGCCCCGAGATCCACT +
Preference number: 4 (lower is better)
Translates to: VGQTGTTGWMVGRAHPPQGVAQA*SAPRST
Trigger: AGTGGATCTCGGGGCTGATCAGGCCTGAGCCACCCC...CTGAGGCGGGTGGGCACGGCCGACCATCCACCCGGTGGTTCCTGTTTGTCCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR TCA 90 bp TCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCTCAAGAGGGTGGCCGGCCGGGCACCCTaGCAGTGGCTGTGGCGTTCT +
Preference number: 4 (lower is better)
Translates to: SSEQPLEHGQCVPLLKRVAGRAP*QWLWRS
Trigger: AGAACGCCACAGCCACTGTCAGGGTGCCCGGCCGGC...CACCCTCTTGAGGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR GCA 90 bp GCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCTCAAGAGGGTTGTCCTCCCTCTCTaGCCTGCACACCCGCGGGCC +
Preference number: 4 (lower is better)
Translates to: ASSEQPLEHGQCVPLLKRVVLPL*PAHPRA
Trigger: GGCCCGCGGGTGTGCAGGGCAGAGAGGGAGGACAAC...CCTCTTGAGGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR GCA 90 bp CTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCCCGCAGGTCCTCCAGTaGCGTTGCCACGGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: LGLPPPSSPLNTGSVSPSPQVLQ*RCHGLG
Trigger: GCCAAGCCCGTGGCAACGGCACTGGAGGACCTGCGG...GGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR GCA 90 bp CCAGGCCCTAGCAGCAGCAGGAGTTCCTGCTGGGACGAGGGAGGGGTCTTTGGGCCGCAGGTCCTCCAGTaGCGTTGCCACGGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: PGPSSSRSSCWDEGGVFGPQVLQ*RCHGLG
Trigger: GCCAAGCCCGTGGCAACGGCACTGGAGGACCTGCGG...CCCAAAGACCCCTCCCTCGTCCCAGCAGGAACTCCTGCTGCTGCTAGGGCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR GCA 90 bp CCAGGCCCTAGCAGCAGCAGGAGTTCCTGCTGGGACGAGGGAGGGGTCTTTGGGGCCACGTGCCGCAGGTaGAGGACAAGGCCGAGGAGC +
Preference number: 4 (lower is better)
Translates to: PGPSSSRSSCWDEGGVFGATCRR*RTRPRS
Trigger: GCTCCTCGGCCTTGTCCTGCACCTGCGGCACGTGGC...CCCAAAGACCCCTCCCTCGTCCCAGCAGGAACTCCTGCTGCTGCTAGGGCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR GCA 90 bp CTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCGCCACGTGCCGCAGGTaGAGGACAAGGCCGAGGAGC +
Preference number: 4 (lower is better)
Translates to: LGLPPPSSPLNTGSVSPSATCRR*RTRPRS
Trigger: GCTCCTCGGCCTTGTCCTGCACCTGCGGCACGTGGC...GGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR GCA 90 bp GAGTTCCTGCTGGGACGAGGGAGGGGTCTTTGGGTGAGCCTGGGGAGCCTCAACCCGTCCTGCCCGTCCTaGCCGTCAGAGCCGCAGGAG +
Preference number: 4 (lower is better)
Translates to: EFLLGRGRGLWVSLGSLNPSCPS*PSEPQE
Trigger: CTCCTGCGGCTCTGACGGGCAGGACGGGCAGGACGG...GTTGAGGCTCCCCAGGCTCACCCAAAGACCCCTCCCTCGTCCCAGCAGGAACTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR GCA 90 bp GCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCTCAAGAGGCGGGGCCGCCTGCTGTaGCCCCCATGTCCGATCTCA +
Preference number: 4 (lower is better)
Translates to: ASSEQPLEHGQCVPLLKRRGRLL*PPCPIS
Trigger: TGAGATCGGACATGGGGGGCACAGCAGGCGGCCCCG...CCTCTTGAGGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR GCA 90 bp GGACAAACAGGAACCACCGGGTGGATGGTCGGCCGTGCCCACCCGCCTCAGGCTCTGGGCTCCTGCTGGTaGTGTACCTCCGGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: GQTGTTGWMVGRAHPPQALGSCW*CTSGVA
Trigger: AGCCACCCCGGAGGTACAGCACCAGCAGGAGCCCAG...AGCCTGAGGCGGGTGGGCACGGCCGACCATCCACCCGGTGGTTCCTGTTTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR CCA 90 bp GAGTTCCTGCTGGGACGAGGGAGGGGTCTTTGGGTGAGCCTGGGGAGCCTCAACCCGAGGGCTCTGATCTaGAGGCGCCACCGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: EFLLGRGRGLWVSLGSLNPRALI*RRHRPL
Trigger: CAGCGGGCGGTGGCGCCTCCAGATCAGAGCCCTCGG...GTTGAGGCTCCCCAGGCTCACCCAAAGACCCCTCCCTCGTCCCAGCAGGAACTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331952.6
ENST00000557649.6
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp GAGTTCCTGCTGGGACGAGGGAGGGGTCTTTGGGTGAGCCTGGGGAGCCTCAACTTGGCCTCTGGGCGGTaGTGCTCCGGCCGGCTCCGT +
Preference number: 4 (lower is better)
Translates to: EFLLGRGRGLWVSLGSLNLASGR*CSGRLR
Trigger: ACGGAGCCGGCCGGAGCACCACCGCCCAGAGGCCAA...GTTGAGGCTCCCCAGGCTCACCCAAAGACCCCTCCCTCGTCCCAGCAGGAACTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp GCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCTCAAGAGGCCGTTGCCACGGGCTTaGCCCGGCCGCAGTATAGGC +
Preference number: 4 (lower is better)
Translates to: ASSEQPLEHGQCVPLLKRPLPRA*PGRSIG
Trigger: GCCTATACTGCGGCCGGGCCAAGCCCGTGGCAACGG...CCTCTTGAGGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp ACGGTGATGGCCGGGCCAGGCCCTAGCAGCAGCAGGAGTTCCTGCTGGGACGAGCGAGGGAGGGGTCTTTaGGTGAGCCTGGGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: TVMAGPGPSSSRSSCWDERGRGL*VSLGSL
Trigger: GAGGCTCCCCAGGCTCACCCAAAGACCCCTCCCTCG...CTCGTCCCAGCAGGAACTCCTGCTGCTGCTAGGGCCTGGCCCGGCCATCACCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp GGACAAACAGGAACCACCGGGTGGATGGTCGGCCGTGCCCACCCGCCTCAGGCTCGAGGGAGGGGTCTTTaGGTGAGCCTGGGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: GQTGTTGWMVGRAHPPQARGRGL*VSLGSL
Trigger: GAGGCTCCCCAGGCTCACCCAAAGACCCCTCCCTCG...AGCCTGAGGCGGGTGGGCACGGCCGACCATCCACCCGGTGGTTCCTGTTTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR CCA 90 bp GAGTTCCTGCTGGGACGAGGGAGGGGTCTTTGGGTGAGCCTGGGGAGCCTCAACCCCACAGGCCCCAGCTaGTGGGTGGTGCTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: EFLLGRGRGLWVSLGSLNPTGPS*WVVLAG
Trigger: GCCAGCCAGCACCACCCACCAGCTGGGGCCTGTGGG...GTTGAGGCTCCCCAGGCTCACCCAAAGACCCCTCCCTCGTCCCAGCAGGAACTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp GTGGGACAAACAGGAACCACCGGGTGGATGGTCGGCCGTGCCCACCCGCCTCAGACAGGAACCACCGGGTaGATGGTCGGCCGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: VGQTGTTGWMVGRAHPPQTGTTG*MVGRAH
Trigger: GTGGGCACGGCCGACCATCCACCCGGTGGTTCCTGT...CTGAGGCGGGTGGGCACGGCCGACCATCCACCCGGTGGTTCCTGTTTGTCCCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR CCA 90 bp ACGGTGATGGCCGGGCCAGGCCCTAGCAGCAGCAGGAGTTCCTGCTGGGACGAGCCTGAGGTCGTAGCGTaGGACCCCGCAAAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: TVMAGPGPSSSRSSCWDEPEVVA*DPAKPG
Trigger: GCCTGGCTTTGCGGGGTCCCACGCTACGACCTCAGG...CTCGTCCCAGCAGGAACTCCTGCTGCTGCTAGGGCCTGGCCCGGCCATCACCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR TCA 90 bp GAGTTCCTGCTGGGACGAGGGAGGGGTCTTTGGGTGAGCCTGGGGAGCCTCAACACAGGAGGGCTGTGCTaGCTAGTGTGGCGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: EFLLGRGRGLWVSLGSLNTGGLC*LVWRGR
Trigger: GCGGCCCCGCCACACTAGTCAGCACAGCCCTCCTGT...GTTGAGGCTCCCCAGGCTCACCCAAAGACCCCTCCCTCGTCCCAGCAGGAACTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR TCA 90 bp TCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCTCAAGAGGGTGCACAGAGGGTGCACACGGTaGTGGCCGGGCCAGGCCCTA +
Preference number: 4 (lower is better)
Translates to: SEQPLEHGQCVPLLKRVHRGCTR*WPGQAL
Trigger: TAGGGCCTGGCCCGGCCATCACCGTGTGCACCCTCT...GTGCACCCTCTTGAGGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR TCA 90 bp TCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCTCAAGAGGGTGAGAGGGTGCACACGGTaGTGGCCGGGCCAGGCCCTA +
Preference number: 4 (lower is better)
Translates to: SSEQPLEHGQCVPLLKRVRGCTR*WPGQAL
Trigger: TAGGGCCTGGCCCGGCCATCACCGTGTGCACCCTCT...CACCCTCTTGAGGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR TCA 90 bp CACGTAGGGTCTGGAGAGGCCCCTGGTGTTTGTCATCCACAGGGCTCCCTTCAGTGGCCTCAGCGGCCCTaGGGGCCCCGGCTGACTTGC +
Preference number: 4 (lower is better)
Translates to: HVGSGEAPGVCHPQGSLQWPQRP*GPRLTC
Trigger: GCAAGTCAGCCGGGGCCCTCAGGGCCGCTGAGGCCA...CTGAAGGGAGCCCTGTGGATGACAAACACCAGGGGCCTCTCCAGACCCTACGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR TCA 90 bp CTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCCCATTACGGCGACACTaGGCAGTGGCCTCAGCGGCC +
Preference number: 4 (lower is better)
Translates to: LGLPPPSSPLNTGSVSPSPLRRH*AVASAA
Trigger: GGCCGCTGAGGCCACTGCTCAGTGTCGCCGTAATGG...GGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR GCA 90 bp TCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCTCAAGAGGGTGGTTGTCCTCCCTCTCTaGCCTGCACACCCGCGGGCC +
Preference number: 4 (lower is better)
Translates to: SSEQPLEHGQCVPLLKRVVVLPL*PAHPRA
Trigger: GGCCCGCGGGTGTGCAGGGCAGAGAGGGAGGACAAC...CACCCTCTTGAGGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR GCA 90 bp TCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCTCAAGAGGGTGCCGCAGGTCCTCCAGTaGCGTTGCCACGGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: SSEQPLEHGQCVPLLKRVPQVLQ*RCHGLG
Trigger: GCCAAGCCCGTGGCAACGGCACTGGAGGACCTGCGG...CACCCTCTTGAGGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR GCA 90 bp GCTGTCTCGGAGCCCCCGGAGTGCTTGAGCTCTCCTGGAAGCCCTGCCCGTCCTTCGGAGCCCCCGGAGTaGTTGAGCTCTCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: AVSEPPECLSSPGSPARPSEPPE*LSSPGS
Trigger: GCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGA...AGGACGGGCAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGAGACAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR GCA 90 bp GCTCAGGCTGTCTCGGAGCCCCCGGAGTGCTTGAGCTCTCCTGGAAGCCCTGCCTCGGAGCCCCCGGAGTaGTTGAGCTCTCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: AQAVSEPPECLSSPGSPASEPPE*LSSPGS
Trigger: GCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGA...GGCAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGAGACAGCCTGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR GCA 90 bp GGCTCAGGCTGTCTCGGAGCCCCCGGAGTGCTTGAGCTCTCCTGGAAGCCCTGCTGGGTGTGCCTGGCCTaGAGAGCTGGGCACAGATGG +
Preference number: 4 (lower is better)
Translates to: GSGCLGAPGVLELSWKPCWVCLA*RAGHRW
Trigger: CCATCTGTGCCCAGCTCTGCAGGCCAGGCACACCCA...GCAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGAGACAGCCTGAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR GCA 90 bp GCTCAGGCTGTCTCGGAGCCCCCGGAGTGCTTGAGCTCTCCTGGAAGCCCTGCCTGGGTGTGCCTGGCCTaGAGAGCTGGGCACAGATGG +
Preference number: 4 (lower is better)
Translates to: AQAVSEPPECLSSPGSPAWVCLA*RAGHRW
Trigger: CCATCTGTGCCCAGCTCTGCAGGCCAGGCACACCCA...GGCAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGAGACAGCCTGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR GCA 90 bp GCTCAGGCTGTCTCGGAGCCCCCGGAGTGCTTGAGCTCTCCTGGAAGCCCTGCCCGCTGGCCTTTCCTCTaGAGGGCGGAGGCAGAACAC +
Preference number: 4 (lower is better)
Translates to: AQAVSEPPECLSSPGSPARWPFL*RAEAEH
Trigger: GTGTTCTGCCTCCGCCCTGCAGAGGAAAGGCCAGCG...GGCAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGAGACAGCCTGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR GCA 90 bp GGCTCAGGCTGTCTCGGAGCCCCCGGAGTGCTTGAGCTCTCCTGGAAGCCCTGCCGCTGGCCTTTCCTCTaGAGGGCGGAGGCAGAACAC +
Preference number: 4 (lower is better)
Translates to: GSGCLGAPGVLELSWKPCRWPFL*RAEAEH
Trigger: GTGTTCTGCCTCCGCCCTGCAGAGGAAAGGCCAGCG...GCAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGAGACAGCCTGAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR GCA 90 bp CCAGGCCCTAGCAGCAGCAGGAGTTCCTGCTGGGACGAGGGAGGGGTCTTTGGGGGGACACACCCTGACTaGAGGGCAAAGGGAGCCGGC +
Preference number: 4 (lower is better)
Translates to: PGPSSSRSSCWDEGGVFGGTHPD*RAKGAG
Trigger: GCCGGCTCCCTTTGCCCTGCAGTCAGGGTGTGTCCC...CCCAAAGACCCCTCCCTCGTCCCAGCAGGAACTCCTGCTGCTGCTAGGGCCTGG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CCA 90 bp GCTGTCTCGGAGCCCCCGGAGTGCTTGAGCTCTCCTGGAAGCCCTGCCCGTCCTCTGACGTCGTGTCTCTaGCCGGGAGTCAGGGCTCAC +
Preference number: 4 (lower is better)
Translates to: AVSEPPECLSSPGSPARPLTSCL*PGVRAH
Trigger: GTGAGCCCTGACTCCCGGCCAGAGACACGACGTCAG...AGGACGGGCAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGAGACAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR CCA 90 bp CACCTTGACAACCAGACCCTTCCCTCCCCGTGGGGTTTCGAGGTCTGGATTCCCCTGGGGCTTGGCCTCTaGGCGGTGGTGCTCCGGCCG +
Preference number: 4 (lower is better)
Translates to: HLDNQTLPSPWGFEVWIPLGLGL*AVVLRP
Trigger: CGGCCGGAGCACCACCGCCCAGAGGCCAAGCCCCAG...GGGAATCCAGACCTCGAAACCCCACGGGGAGGGAAGGGTCTGGTTGTCAAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp GGCTCCCTTCAGCTCTGCAATCCGGCGACAAAGCCACAACCACAGACGGTCTCCCTGGGGCTTGGCCTCTaGGCGGTGGTGCTCCGGCCG +
Preference number: 4 (lower is better)
Translates to: GSLQLCNPATKPQPQTVSLGLGL*AVVLRP
Trigger: CGGCCGGAGCACCACCGCCCAGAGGCCAAGCCCCAG...GGAGACCGTCTGTGGTTGTGGCTTTGTCGCCGGATTGCAGAGCTGAAGGGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR CCA 90 bp GGACAAACAGGAACCACCGGGTGGATGGTCGGCCGTGCCCACCCGCCTCAGGCTGTGGACGGTCACCGCTaGGGGTTCTCGGAACCACAC +
Preference number: 4 (lower is better)
Translates to: GQTGTTGWMVGRAHPPQAVDGHR*GFSEPH
Trigger: GTGTGGTTCCGAGAACCCCCAGCGGTGACCGTCCAC...AGCCTGAGGCGGGTGGGCACGGCCGACCATCCACCCGGTGGTTCCTGTTTGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR CCA 90 bp TCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCTCAAGAGGGTGCCGTTGCCACGGGCTTaGCCCGGCCGCAGTATAGGC +
Preference number: 4 (lower is better)
Translates to: SSEQPLEHGQCVPLLKRVPLPRA*PGRSIG
Trigger: GCCTATACTGCGGCCGGGCCAAGCCCGTGGCAACGG...CACCCTCTTGAGGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp GGCTCAGGCTGTCTCGGAGCCCCCGGAGTGCTTGAGCTCTCCTGGAAGCCCTGCTGGACACTGCCTCGCTaGCCTTTCCTCTGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: GSGCLGAPGVLELSWKPCWTLPR*PFLCRA
Trigger: CGCCCTGCAGAGGAAAGGCCAGCGAGGCAGTGTCCA...GCAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGAGACAGCCTGAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR CCA 90 bp GCTCAGGCTGTCTCGGAGCCCCCGGAGTGCTTGAGCTCTCCTGGAAGCCCTGCCTGGACACTGCCTCGCTaGCCTTTCCTCTGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: AQAVSEPPECLSSPGSPAWTLPR*PFLCRA
Trigger: CGCCCTGCAGAGGAAAGGCCAGCGAGGCAGTGTCCA...GGCAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGAGACAGCCTGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR CCA 90 bp GCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCTCAAGAGGCGTCAACCACGGGCTTaGTGGCCCCAGGAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: ASSEQPLEHGQCVPLLKRRQPRA*WPQEEL
Trigger: CAGCTCCTCCTGGGGCCACCAAGCCCGTGGTTGACG...CCTCTTGAGGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR CCA 90 bp GGCTCAGGCTGTCTCGGAGCCCCCGGAGTGCTTGAGCTCTCCTGGAAGCCCTGCCCCCCACGTAGGGTCTaGAGAGGCCCCTGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: GSGCLGAPGVLELSWKPCPPRRV*RGPWCL
Trigger: CAAACACCAGGGGCCTCTCCAGACCCTACGTGGGGG...GCAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGAGACAGCCTGAGCC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR CCA 90 bp GCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCTCAAGAGGACAGGAACCACCGGGTaGATGGTCGGCCGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: ASSEQPLEHGQCVPLLKRTGTTG*MVGRAH
Trigger: GTGGGCACGGCCGACCATCCACCCGGTGGTTCCTGT...CCTCTTGAGGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR CCA 90 bp GCCTGCAGGAGATGGGGAGGTTCCAGGCGCCCAGGACATCCGCTTTGGCCACTGACAGGAACCACCGGGTaGATGGTCGGCCGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: ACRRWGGSRRPGHPLWPLTGTTG*MVGRAH
Trigger: GTGGGCACGGCCGACCATCCACCCGGTGGTTCCTGT...CAGTGGCCAAAGCGGATGTCCTGGGCGCCTGGAACCTCCCCATCTCCTGCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CCA 90 bp GCTCAGGCTGTCTCGGAGCCCCCGGAGTGCTTGAGCTCTCCTGGAAGCCCTGCCCGTCAGAACCGGGGCTaGAGGGGTGTCCCAAGCACA +
Preference number: 4 (lower is better)
Translates to: AQAVSEPPECLSSPGSPARQNRG*RGVPST
Trigger: TGTGCTTGGGACACCCCTCCAGCCCCGGTTCTGACG...GGCAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGAGACAGCCTGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CCA 90 bp CCAGGCCCTAGCAGCAGCAGGAGTTCCTGCTGGGACGAGGGAGGGGTCTTTGGGACAGACAGCAGCGGCTaGGGGAGATCGGCCTGTGCG +
Preference number: 4 (lower is better)
Translates to: PGPSSSRSSCWDEGGVFGTDSSG*GRSACA
Trigger: CGCACAGGCCGATCTCCCCCAGCCGCTGCTGTCTGT...CCCAAAGACCCCTCCCTCGTCCCAGCAGGAACTCCTGCTGCTGCTAGGGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CCA 90 bp GCCTGCAGGAGATGGGGAGGTTCCAGGCGCCCAGGACATCCGCTTTGGCCACTGGCTGGATCGCAAAGCTaGGCCAGCTGGCAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: ACRRWGGSRRPGHPLWPLAGSQS*ASWQRP
Trigger: TGGCCGCTGCCAGCTGGCCCAGCTTTGCGATCCAGC...CAGTGGCCAAAGCGGATGTCCTGGGCGCCTGGAACCTCCCCATCTCCTGCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630349.2
CDS-3UTR CCA 90 bp GCCTGCAGGAGATGGGGAGGTTCCAGGCGCCCAGGACATCCGCTTTGGCCACTGGGGCCGGGTCTGTTGTaGCCTTCGTCCCGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: ACRRWGGSRRPGHPLWPLGPGLL*PSSRLQ
Trigger: CTGGAGACGGGACGAAGGCCACAACAGACCCGGCCC...CAGTGGCCAAAGCGGATGTCCTGGGCGCCTGGAACCTCCCCATCTCCTGCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630349.2
3UTR CAA 72 bp AGCGTGGGACCCCGCAAAGCCAGGCACGTCCTTGCGTaGCCTTTGCAGTGGACAGACAGCAGCGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: SVGPRKARHVLA*PLQWTDSSGWG
Trigger: CCCCCAGCCGCTGCTGTCTGTCCACTGCAAAGGCAACGCAAGGACGTGCCTGGCTTTGCGGGGTCCCACGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR TCA 90 bp ACGGTGATGGCCGGGCCAGGCCCTAGCAGCAGCAGGAGTTCCTGCTGGGACGAGCAGGCCCTTGAGAGTTaGGCCTCGGGCAGAACTGCA +
Preference number: 4 (lower is better)
Translates to: TVMAGPGPSSSRSSCWDEQALES*ASGRTA
Trigger: TGCAGTTCTGCCCGAGGCTCAACTCTCAAGGGCCTG...CTCGTCCCAGCAGGAACTCCTGCTGCTGCTAGGGCCTGGCCCGGCCATCACCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331952.6
ENST00000557649.6
ENST00000619279.4
ENST00000630349.2
CDS-3UTR TCA 90 bp ACGGTGATGGCCGGGCCAGGCCCTAGCAGCAGCAGGAGTTCCTGCTGGGACGAGGCACACACACAGCCCTaGCAGTGGCTGTGGCGTTCT +
Preference number: 4 (lower is better)
Translates to: TVMAGPGPSSSRSSCWDEAHTQP*QWLWRS
Trigger: AGAACGCCACAGCCACTGTCAGGGCTGTGTGTGTGC...CTCGTCCCAGCAGGAACTCCTGCTGCTGCTAGGGCCTGGCCCGGCCATCACCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331952.6
ENST00000619279.4
CDS-3UTR TCA 90 bp GAGGGGTCTTTGGGTGAGCCTGGGGAGCCTCAACTGTTAGCAGTCGAATCCTCTGGCCGCGCCAGCAGGTaGGGGCCACGTGCCGCAGGT +
Preference number: 4 (lower is better)
Translates to: EGSLGEPGEPQLLAVESSGRASR*GPRAAG
Trigger: ACCTGCGGCACGTGGCCCTCACCTGCTGGCGCGGCC...AGAGGATTCGACTGCTAACAGTTGAGGCTCCCCAGGCTCACCCAAAGACCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR TCA 90 bp AGACCTGGGCTCAGAGGATGGCACCTCACATCAAAGGGACCCACCTTGACAACCGGCCGCGCCAGCAGGTaGGGGCCACGTGCCGCAGGT +
Preference number: 4 (lower is better)
Translates to: RPGLRGWHLTSKGPTLTTGRASR*GPRAAG
Trigger: ACCTGCGGCACGTGGCCCTCACCTGCTGGCGCGGCC...GGTTGTCAAGGTGGGTCCCTTTGATGTGAGGTGCCATCCTCTGAGCCCAGGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR TCA 90 bp GAGTTCCTGCTGGGACGAGGGAGGGGTCTTTGGGTGAGCCTGGGGAGCCTCAACAGCCCCCGGAGTGCTTaGGCTCTCCTGGAAGCCCTG +
Preference number: 4 (lower is better)
Translates to: EFLLGRGRGLWVSLGSLNSPRSA*ALLEAL
Trigger: CAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCT...GTTGAGGCTCCCCAGGCTCACCCAAAGACCCCTCCCTCGTCCCAGCAGGAACTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR TCA 90 bp TCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCTCAAGAGGGTGCTCCGAGCAGCCCCTTaGACACGGGCAGTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: SSEQPLEHGQCVPLLKRVLRAAP*TRAVCP
Trigger: GGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAG...CACCCTCTTGAGGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR TCA 90 bp GCTCAGGCTGTCTCGGAGCCCCCGGAGTGCTTGAGCTCTCCTGGAAGCCCTGCCCACAGATGGCTGTTCTaGAGGTCGGGGGTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: AQAVSEPPECLSSPGSPAHRWLF*RSGVSG
Trigger: CCCAGACACCCCCGACCTTCAGAACAGCCATCTGTG...GGCAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGAGACAGCCTGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR TCA 90 bp GCAATCCGGCGACAAAGCCACAACCACAGACGGTCTCCGGGACCCACAGGCCCCCGCTGTCGCAGGGTGTaGACCAGAGCTGTTGCGGCT +
Preference number: 4 (lower is better)
Translates to: AIRRQSHNHRRSPGPTGPRCRRV*TRAVAA
Trigger: AGCCGCAACAGCTCTGGTTCACACCCTGCGACAGCG...GGGGCCTGTGGGTCCCGGAGACCGTCTGTGGTTGTGGCTTTGTCGCCGGATTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR GCA 90 bp AAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCGCCTCTGGGCGGTGGTaGTCCGGCCGGCTCCGTTTC +
Preference number: 4 (lower is better)
Translates to: KRLGLPPPSSPLNTGSVSASGRW*SGRLRF
Trigger: GAAACGGAGCCGGCCGGAGCACCACCGCCCAGAGGC...GGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR GCA 90 bp GGCTCCCTTCAGCTCTGCAATCCGGCGACAAAGCCACAACCACAGACGGTCTCCCCGTCCTGCCCGTCCTaGCCGTCAGAGCCGCAGGAG +
Preference number: 4 (lower is better)
Translates to: GSLQLCNPATKPQPQTVSPSCPS*PSEPQE
Trigger: CTCCTGCGGCTCTGACGGGCAGGACGGGCAGGACGG...GGAGACCGTCTGTGGTTGTGGCTTTGTCGCCGGATTGCAGAGCTGAAGGGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR GCA 90 bp CCAGGCCCTAGCAGCAGCAGGAGTTCCTGCTGGGACGAGGGAGGGGTCTTTGGGAGCAGCAGGAGTTCCTaGTGGGACGAGGGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: PGPSSSRSSCWDEGGVFGSSRSS*WDEGGV
Trigger: GACCCCTCCCTCGTCCCAGCAGGAACTCCTGCTGCT...CCCAAAGACCCCTCCCTCGTCCCAGCAGGAACTCCTGCTGCTGCTAGGGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR GCA 90 bp CTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCGGTGTCTGGGCCCCTTaGTGTCCCCTCGGCTTCTAC +
Preference number: 4 (lower is better)
Translates to: LGLPPPSSPLNTGSVSPSGVWAP*CPLGFY
Trigger: GTAGAAGCCGAGGGGACAGCAAGGGGCCCAGACACC...GGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR GCA 90 bp CCAGGCCCTAGCAGCAGCAGGAGTTCCTGCTGGGACGAGGGAGGGGTCTTTGGGTGGGTGTGCCTGGCCTaGAGAGCTGGGCACAGATGG +
Preference number: 4 (lower is better)
Translates to: PGPSSSRSSCWDEGGVFGWVCLA*RAGHRW
Trigger: CCATCTGTGCCCAGCTCTGCAGGCCAGGCACACCCA...CCCAAAGACCCCTCCCTCGTCCCAGCAGGAACTCCTGCTGCTGCTAGGGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR GCA 90 bp GCTCAGGCTGTCTCGGAGCCCCCGGAGTGCTTGAGCTCTCCTGGAAGCCCTGCCCCCTGGGGCTGCAGATaGAGGTTGTGCCTTCTTCCG +
Preference number: 4 (lower is better)
Translates to: AQAVSEPPECLSSPGSPAPWGCR*RLCLLP
Trigger: CGGAAGAAGGCACAACCTGCATCTGCAGCCCCAGGG...GGCAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGAGACAGCCTGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR GCA 90 bp AAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCGGGCCCCGGCTGACTTaGTGCTCTCGGGACAGCCCG +
Preference number: 4 (lower is better)
Translates to: KRLGLPPPSSPLNTGSVSGPRLT*CSRDSP
Trigger: CGGGCTGTCCCGAGAGCAGCAAGTCAGCCGGGGCCC...GGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR GCA 90 bp GGCTCCCTTCAGCTCTGCAATCCGGCGACAAAGCCACAACCACAGACGGTCTCCGGGCCCCGGCTGACTTaGTGCTCTCGGGACAGCCCG +
Preference number: 4 (lower is better)
Translates to: GSLQLCNPATKPQPQTVSGPRLT*CSRDSP
Trigger: CGGGCTGTCCCGAGAGCAGCAAGTCAGCCGGGGCCC...GGAGACCGTCTGTGGTTGTGGCTTTGTCGCCGGATTGCAGAGCTGAAGGGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR GCA 90 bp GGACAAACAGGAACCACCGGGTGGATGGTCGGCCGTGCCCACCCGCCTCAGGCTATCCACTCCCAGGCCTaGAGGAGATGGGGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: GQTGTTGWMVGRAHPPQAIHSQA*RRWGGS
Trigger: GGAACCTCCCCATCTCCTGCAGGCCTGGGAGTGGAT...AGCCTGAGGCGGGTGGGCACGGCCGACCATCCACCCGGTGGTTCCTGTTTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR GCA 90 bp GCTCAGGCTGTCTCGGAGCCCCCGGAGTGCTTGAGCTCTCCTGGAAGCCCTGCCGCCTGGGCCTGTGACTaGTCTGAGAGACCCAACCTC +
Preference number: 4 (lower is better)
Translates to: AQAVSEPPECLSSPGSPAAWACD*SERPNL
Trigger: GAGGTTGGGTCTCTCAGAGCAGTCACAGGCCCAGGC...GGCAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGAGACAGCCTGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR GCA 90 bp GGCTCAGGCTGTCTCGGAGCCCCCGGAGTGCTTGAGCTCTCCTGGAAGCCCTGCGTCTCCAGCCCTCTCTaGTGGATCGCAAAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GSGCLGAPGVLELSWKPCVSSPL*WIAKLG
Trigger: GCCCAGCTTTGCGATCCAGCAGAGAGGGCTGGAGAC...GCAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGAGACAGCCTGAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000630349.2
CDS-3UTR CCA 90 bp CACGTAGGGTCTGGAGAGGCCCCTGGTGTTTGTCATCCACAGGGCTCCCTTCAGCCGAGGGCTCTGATCTaGAGGCGCCACCGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: HVGSGEAPGVCHPQGSLQPRALI*RRHRPL
Trigger: CAGCGGGCGGTGGCGCCTCCAGATCAGAGCCCTCGG...CTGAAGGGAGCCCTGTGGATGACAAACACCAGGGGCCTCTCCAGACCCTACGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CCA 90 bp GCTGTCTCGGAGCCCCCGGAGTGCTTGAGCTCTCCTGGAAGCCCTGCCCGTCCTACTGGAACATGGTCCTaGTTCCCTCCTGGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: AVSEPPECLSSPGSPARPTGTWS*FPPGSP
Trigger: CGGGGAGCCAGGAGGGAACCAGGACCATGTTCCAGT...AGGACGGGCAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGAGACAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CCA 90 bp CTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCCTGACGTCGTGTCTCTaGCCGGGAGTCAGGGCTCAC +
Preference number: 4 (lower is better)
Translates to: LGLPPPSSPLNTGSVSPSLTSCL*PGVRAH
Trigger: GTGAGCCCTGACTCCCGGCCAGAGACACGACGTCAG...GGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp AATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTCTGGGGCTTGGCCTCTaGGCGGTGGTGCTCCGGCCG +
Preference number: 4 (lower is better)
Translates to: NRKRLGLPPPSSPLNTGSLGLGL*AVVLRP
Trigger: CGGCCGGAGCACCACCGCCCAGAGGCCAAGCCCCAG...ACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp GGCTCCCTTCAGCTCTGCAATCCGGCGACAAAGCCACAACCACAGACGGTCTCCCGCCTCGAGGTCCTCTaGGGCTTGGCCTCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: GSLQLCNPATKPQPQTVSRLEVL*GLASGR
Trigger: CCGCCCAGAGGCCAAGCCCCAGAGGACCTCGAGGCG...GGAGACCGTCTGTGGTTGTGGCTTTGTCGCCGGATTGCAGAGCTGAAGGGAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR CCA 90 bp TCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCTCAAGAGGGTGCGAGGGAGGGGTCTTTaGGTGAGCCTGGGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: SSEQPLEHGQCVPLLKRVRGRGL*VSLGSL
Trigger: GAGGCTCCCCAGGCTCACCCAAAGACCCCTCCCTCG...CACCCTCTTGAGGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp AAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCGCTGGTGGGTGGTGCTaGCTGGCCCCGGGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: KRLGLPPPSSPLNTGSVSAGGWC*LAPGSA
Trigger: AGCTGAGCCCGGGGCCAGCCAGCACCACCCACCAGC...GGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp CACGTAGGGTCTGGAGAGGCCCCTGGTGTTTGTCATCCACAGGGCTCCCTTCAGGCTGGTGGGTGGTGCTaGCTGGCCCCGGGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: HVGSGEAPGVCHPQGSLQAGGWC*LAPGSA
Trigger: AGCTGAGCCCGGGGCCAGCCAGCACCACCCACCAGC...CTGAAGGGAGCCCTGTGGATGACAAACACCAGGGGCCTCTCCAGACCCTACGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR CCA 90 bp GAGTTCCTGCTGGGACGAGGGAGGGGTCTTTGGGTGAGCCTGGGGAGCCTCAACGCCAGGCGGGGTGGCTaGGCTCCTGGGAAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: EFLLGRGRGLWVSLGSLNARRGG*APGKSL
Trigger: AAGGCTTTTCCCAGGAGCCCAGCCACCCCGCCTGGC...GTTGAGGCTCCCCAGGCTCACCCAAAGACCCCTCCCTCGTCCCAGCAGGAACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR CCA 90 bp GGACAAACAGGAACCACCGGGTGGATGGTCGGCCGTGCCCACCCGCCTCAGGCTACAGGCCTAACCCAATaGCCCTGGGGCTGCAGATGC +
Preference number: 4 (lower is better)
Translates to: GQTGTTGWMVGRAHPPQATGLTQ*PWGCRC
Trigger: GCATCTGCAGCCCCAGGGCCATTGGGTTAGGCCTGT...AGCCTGAGGCGGGTGGGCACGGCCGACCATCCACCCGGTGGTTCCTGTTTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR CCA 90 bp TCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCTCAAGAGGGTGGCTGTACCTCCGGGGTaGCTCAGGCCTGATCAGCCC +
Preference number: 4 (lower is better)
Translates to: SSEQPLEHGQCVPLLKRVAVPPG*LRPDQP
Trigger: GGGCTGATCAGGCCTGAGCCACCCCGGAGGTACAGC...CACCCTCTTGAGGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR CCA 90 bp GCTCAGGCTGTCTCGGAGCCCCCGGAGTGCTTGAGCTCTCCTGGAAGCCCTGCCGCGTTGCCTTTGCAGTaGACAGACAGCAGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: AQAVSEPPECLSSPGSPAALPLQ*TDSSGW
Trigger: CCAGCCGCTGCTGTCTGTCCACTGCAAAGGCAACGC...GGCAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGAGACAGCCTGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
3UTR CAA 72 bp GGACCCCGCAAAGCCAGGCACGTCCTTGCGTTGCCTTaGCAGTGGACAGACAGCAGCGGCTGGGGGAGATCG +
Preference number: 4 (lower is better)
Translates to: GPRKARHVLALP*QWTDSSGWGRS
Trigger: CGATCTCCCCCAGCCGCTGCTGTCTGTCCACTGCAAAGGCAACGCAAGGACGTGCCTGGCTTTGCGGGGTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR TCA 90 bp TCTGGGAGCCGCTGCTTCTGCATCCAGAATATGGGGCAGGAACCTGCCCATCCTCCTTCCCGAGGGCTCTaGTCTGGAGGCGCCACCGCC +
Preference number: 4 (lower is better)
Translates to: SGSRCFCIQNMGQEPAHPPSRGL*SGGATA
Trigger: GGCGGTGGCGCCTCCAGATCAGAGCCCTCGGGAAGG...AGGATGGGCAGGTTCCTGCCCCATATTCTGGATGCAGAAGCAGCGGCTCCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR TCA 90 bp CCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGTGCAGGGCACACAGGTaGACGGGCCAGGCCCGCCCA +
Preference number: 4 (lower is better)
Translates to: PTSHNRKRLGLPPPSSPLCRAHR*TGQARP
Trigger: TGGGCGGGCCTGGCCCGTTCACCTGTGTGCCCTGCA...CAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331952.6
ENST00000557649.6
ENST00000619279.4
ENST00000630349.2
CDS-3UTR TCA 90 bp AAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCACAGGAGGGCTGTGCTaGCTAGTGTGGCGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: KRLGLPPPSSPLNTGSVSTGGLC*LVWRGR
Trigger: GCGGCCCCGCCACACTAGTCAGCACAGCCCTCCTGT...GGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR TCA 90 bp CACGTAGGGTCTGGAGAGGCCCCTGGTGTTTGTCATCCACAGGGCTCCCTTCAGAGAGGGTGCACACGGTaGTGGCCGGGCCAGGCCCTA +
Preference number: 4 (lower is better)
Translates to: HVGSGEAPGVCHPQGSLQRGCTR*WPGQAL
Trigger: TAGGGCCTGGCCCGGCCATCACCGTGTGCACCCTCT...CTGAAGGGAGCCCTGTGGATGACAAACACCAGGGGCCTCTCCAGACCCTACGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR TCA 90 bp AAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCAGAGGGTGCACACGGTaGTGGCCGGGCCAGGCCCTA +
Preference number: 4 (lower is better)
Translates to: KRLGLPPPSSPLNTGSVSRGCTR*WPGQAL
Trigger: TAGGGCCTGGCCCGGCCATCACCGTGTGCACCCTCT...GGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR TCA 90 bp GGCTCAGGCTGTCTCGGAGCCCCCGGAGTGCTTGAGCTCTCCTGGAAGCCCTGCCAAAGGGACCCACCTTaGCAACCAGACCCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: GSGCLGAPGVLELSWKPCQRDPP*QPDPSL
Trigger: GAGGGAAGGGTCTGGTTGTCAAGGTGGGTCCCTTTG...GCAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGAGACAGCCTGAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR TCA 90 bp GGACAAACAGGAACCACCGGGTGGATGGTCGGCCGTGCCCACCCGCCTCAGGCTCAAAGGGACCCACCTTaGCAACCAGACCCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: GQTGTTGWMVGRAHPPQAQRDPP*QPDPSL
Trigger: GAGGGAAGGGTCTGGTTGTCAAGGTGGGTCCCTTTG...AGCCTGAGGCGGGTGGGCACGGCCGACCATCCACCCGGTGGTTCCTGTTTGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR TCA 90 bp GCCTGCAGGAGATGGGGAGGTTCCAGGCGCCCAGGACATCCGCTTTGGCCACTGCACAGATGGCTGTTCTaGAGGTCGGGGGTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: ACRRWGGSRRPGHPLWPLHRWLF*RSGVSG
Trigger: CCCAGACACCCCCGACCTTCAGAACAGCCATCTGTG...CAGTGGCCAAAGCGGATGTCCTGGGCGCCTGGAACCTCCCCATCTCCTGCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR TCA 90 bp GAGGGGTCTTTGGGTGAGCCTGGGGAGCCTCAACTGTTAGCAGTCGAATCCTCTTGGCCTCAGCGGCCCTaGGGGCCCCGGCTGACTTGC +
Preference number: 4 (lower is better)
Translates to: EGSLGEPGEPQLLAVESSWPQRP*GPRLTC
Trigger: GCAAGTCAGCCGGGGCCCTCAGGGCCGCTGAGGCCA...AGAGGATTCGACTGCTAACAGTTGAGGCTCCCCAGGCTCACCCAAAGACCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR TCA 90 bp GGAGCCGCTGCTTCTGCATCCAGAATATGGGGCAGGAACCTGCCCATCCTCCTTGCCGGCCGGGCACCCTaGCAGTGGCTGTGGCGTTCT +
Preference number: 4 (lower is better)
Translates to: GAAASASRIWGRNLPILLAGRAP*QWLWRS
Trigger: AGAACGCCACAGCCACTGTCAGGGTGCCCGGCCGGC...AAGGAGGATGGGCAGGTTCCTGCCCCATATTCTGGATGCAGAAGCAGCGGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR TCA 90 bp ACGGTGATGGCCGGGCCAGGCCCTAGCAGCAGCAGGAGTTCCTGCTGGGACGAGTCGAGGACGCTGGTCTaGTTGTCCCTGTGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: TVMAGPGPSSSRSSCWDESRTLV*LSLCLS
Trigger: GGAGAGACACAGGGACAATCAGACCAGCGTCCTCGA...CTCGTCCCAGCAGGAACTCCTGCTGCTGCTAGGGCCTGGCCCGGCCATCACCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR TCA 90 bp GCTCAGGCTGTCTCGGAGCCCCCGGAGTGCTTGAGCTCTCCTGGAAGCCCTGCCTCGAGGACGCTGGTCTaGTTGTCCCTGTGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: AQAVSEPPECLSSPGSPASRTLV*LSLCLS
Trigger: GGAGAGACACAGGGACAATCAGACCAGCGTCCTCGA...GGCAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGAGACAGCCTGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR GCA 90 bp AGACCTGGGCTCAGAGGATGGCACCTCACATCAAAGGGACCCACCTTGACAACCCCTCCCTCTCTGCCCTaGACACCCGCGGGCCCCACG +
Preference number: 4 (lower is better)
Translates to: RPGLRGWHLTSKGPTLTTPPSLP*TPAGPT
Trigger: CGTGGGGCCCGCGGGTGTGCAGGGCAGAGAGGGAGG...GGTTGTCAAGGTGGGTCCCTTTGATGTGAGGTGCCATCCTCTGAGCCCAGGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR GCA 90 bp GAGGGGTCTTTGGGTGAGCCTGGGGAGCCTCAACTGTTAGCAGTCGAATCCTCTCCTCCCTCTCTGCCCTaGACACCCGCGGGCCCCACG +
Preference number: 4 (lower is better)
Translates to: EGSLGEPGEPQLLAVESSPPSLP*TPAGPT
Trigger: CGTGGGGCCCGCGGGTGTGCAGGGCAGAGAGGGAGG...AGAGGATTCGACTGCTAACAGTTGAGGCTCCCCAGGCTCACCCAAAGACCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR GCA 90 bp TTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCGCCTCTGGGCGGTGGTaGTCCGGCCGGCTCCGTTTC +
Preference number: 4 (lower is better)
Translates to: FPTSHNRKRLGLPPPSSPASGRW*SGRLRF
Trigger: GAAACGGAGCCGGCCGGAGCACCACCGCCCAGAGGC...GGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR GCA 90 bp CACGTAGGGTCTGGAGAGGCCCCTGGTGTTTGTCATCCACAGGGCTCCCTTCAGGCCACGTGCCGCAGGTaGAGGACAAGGCCGAGGAGC +
Preference number: 4 (lower is better)
Translates to: HVGSGEAPGVCHPQGSLQATCRR*RTRPRS
Trigger: GCTCCTCGGCCTTGTCCTGCACCTGCGGCACGTGGC...CTGAAGGGAGCCCTGTGGATGACAAACACCAGGGGCCTCTCCAGACCCTACGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR GCA 90 bp ACCCTGGAGACCACTTCACCTGTTCCCTGGCACCTGGAGTTGCAGGGACACACCGCCACGTGCCGCAGGTaGAGGACAAGGCCGAGGAGC +
Preference number: 4 (lower is better)
Translates to: TLETTSPVPWHLELQGHTATCRR*RTRPRS
Trigger: GCTCCTCGGCCTTGTCCTGCACCTGCGGCACGTGGC...GGTGTGTCCCTGCAACTCCAGGTGCCAGGGAACAGGTGAAGTGGTCTCCAGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR GCA 90 bp AATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTCCGTCCTGCCCGTCCTaGCCGTCAGAGCCGCAGGAG +
Preference number: 4 (lower is better)
Translates to: NRKRLGLPPPSSPLNTGSPSCPS*PSEPQE
Trigger: CTCCTGCGGCTCTGACGGGCAGGACGGGCAGGACGG...ACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR GCA 90 bp TTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCCCGTCCTGCCCGTCCTaGCCGTCAGAGCCGCAGGAG +
Preference number: 4 (lower is better)
Translates to: FPTSHNRKRLGLPPPSSPPSCPS*PSEPQE
Trigger: CTCCTGCGGCTCTGACGGGCAGGACGGGCAGGACGG...GGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR GCA 90 bp TCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCTCAAGAGGGTGTCGGAGCCCCCGGAGTaGTTGAGCTCTCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: SSEQPLEHGQCVPLLKRVSEPPE*LSSPGS
Trigger: GCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGA...CACCCTCTTGAGGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR GCA 90 bp CACCTTGACAACCAGACCCTTCCCTCCCCGTGGGGTTTCGAGGTCTGGATTCCCCGGGGCCGCCTGCTGTaGCCCCCATGTCCGATCTCA +
Preference number: 4 (lower is better)
Translates to: HLDNQTLPSPWGFEVWIPRGRLL*PPCPIS
Trigger: TGAGATCGGACATGGGGGGCACAGCAGGCGGCCCCG...GGGAATCCAGACCTCGAAACCCCACGGGGAGGGAAGGGTCTGGTTGTCAAGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR GCA 90 bp GCAATCCGGCGACAAAGCCACAACCACAGACGGTCTCCGGGACCCACAGGCCCCGCAAAAGGCTGGGTTTaGCTCCTCCGAGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: AIRRQSHNHRRSPGPTGPAKGWV*LLRAAP
Trigger: AGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGC...GGGGCCTGTGGGTCCCGGAGACCGTCTGTGGTTGTGGCTTTGTCGCCGGATTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR GCA 90 bp TCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCTCAAGAGGGTGGGTGTCTGGGCCCCTTaGTGTCCCCTCGGCTTCTAC +
Preference number: 4 (lower is better)
Translates to: SSEQPLEHGQCVPLLKRVGVWAP*CPLGFY
Trigger: GTAGAAGCCGAGGGGACAGCAAGGGGCCCAGACACC...CACCCTCTTGAGGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR GCA 90 bp GTGGGACAAACAGGAACCACCGGGTGGATGGTCGGCCGTGCCCACCCGCCTCAGGGCTCCCTTCAGCTCTaGAATCCGGCGACAAAGCCA +
Preference number: 4 (lower is better)
Translates to: VGQTGTTGWMVGRAHPPQGSLQL*NPATKP
Trigger: TGGCTTTGTCGCCGGATTGCAGAGCTGAAGGGAGCC...CTGAGGCGGGTGGGCACGGCCGACCATCCACCCGGTGGTTCCTGTTTGTCCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR GCA 90 bp GCTGTCTCGGAGCCCCCGGAGTGCTTGAGCTCTCCTGGAAGCCCTGCCCGTCCTGGCTCCCTTCAGCTCTaGAATCCGGCGACAAAGCCA +
Preference number: 4 (lower is better)
Translates to: AVSEPPECLSSPGSPARPGSLQL*NPATKP
Trigger: TGGCTTTGTCGCCGGATTGCAGAGCTGAAGGGAGCC...AGGACGGGCAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGAGACAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR GCA 90 bp TCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCTCAAGAGGGTGGGCTTGGTCAGCCCCTaGCCGAGTGGACACATCCAC +
Preference number: 4 (lower is better)
Translates to: SSEQPLEHGQCVPLLKRVGLVSP*PSGHIH
Trigger: GTGGATGTGTCCACTCGGGCAGGGGCTGACCAAGCC...CACCCTCTTGAGGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CCA 90 bp CTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCGTCCTGGTTCCCTCCTaGCTCCCCGAGGGACAGAAA +
Preference number: 4 (lower is better)
Translates to: LGLPPPSSPLNTGSVSPSVLVPS*LPEGQK
Trigger: TTTCTGTCCCTCGGGGAGCCAGGAGGGAACCAGGAC...GGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000331952.6
ENST00000557649.6
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp CCAGGCCCTAGCAGCAGCAGGAGTTCCTGCTGGGACGAGGGAGGGGTCTTTGGGACTGGAACATGGTCCTaGTTCCCTCCTGGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: PGPSSSRSSCWDEGGVFGTGTWS*FPPGSP
Trigger: CGGGGAGCCAGGAGGGAACCAGGACCATGTTCCAGT...CCCAAAGACCCCTCCCTCGTCCCAGCAGGAACTCCTGCTGCTGCTAGGGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331952.6
ENST00000557649.6
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp AATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTTTGGCCTCTGGGCGGTaGTGCTCCGGCCGGCTCCGT +
Preference number: 4 (lower is better)
Translates to: NRKRLGLPPPSSPLNTGSLASGR*CSGRLR
Trigger: ACGGAGCCGGCCGGAGCACCACCGCCCAGAGGCCAA...ACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp GATTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCTGGGGCTTGGCCTCTaGGCGGTGGTGCTCCGGCCG +
Preference number: 4 (lower is better)
Translates to: DSPQAIIAKGWVCLLRAALGLGL*AVVLRP
Trigger: CGGCCGGAGCACCACCGCCCAGAGGCCAAGCCCCAG...GGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp AATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTCGCCTCGAGGTCCTCTaGGGCTTGGCCTCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: NRKRLGLPPPSSPLNTGSRLEVL*GLASGR
Trigger: CCGCCCAGAGGCCAAGCCCCAGAGGACCTCGAGGCG...ACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp AAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCGTTGCCACGGGCTTaGCCCGGCCGCAGTATAGGC +
Preference number: 4 (lower is better)
Translates to: KRLGLPPPSSPLNTGSVSPLPRA*PGRSIG
Trigger: GCCTATACTGCGGCCGGGCCAAGCCCGTGGCAACGG...GGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp GCTGTCTCGGAGCCCCCGGAGTGCTTGAGCTCTCCTGGAAGCCCTGCCCGTCCTAGCAGGAGTTCCTGCTaGGACGAGGGAGGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: AVSEPPECLSSPGSPARPSRSSC*DEGGVF
Trigger: AAAGACCCCTCCCTCGTCCCAGCAGGAACTCCTGCT...AGGACGGGCAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGAGACAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR CCA 90 bp GGCTCAGGCTGTCTCGGAGCCCCCGGAGTGCTTGAGCTCTCCTGGAAGCCCTGCAGCAGGAGTTCCTGCTaGGACGAGGGAGGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: GSGCLGAPGVLELSWKPCSRSSC*DEGGVF
Trigger: AAAGACCCCTCCCTCGTCCCAGCAGGAACTCCTGCT...GCAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGAGACAGCCTGAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR CCA 90 bp GCTGTCTCGGAGCCCCCGGAGTGCTTGAGCTCTCCTGGAAGCCCTGCCCGTCCTACCCTTCCCTCCCCGTaGGGTTTCGAGGTCTGGATT +
Preference number: 4 (lower is better)
Translates to: AVSEPPECLSSPGSPARPTLPSP*GFEVWI
Trigger: AATCCAGACCTCGAAACCCCACGGGGAGGGAAGGGT...AGGACGGGCAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGAGACAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR CCA 90 bp GCTCAGGCTGTCTCGGAGCCCCCGGAGTGCTTGAGCTCTCCTGGAAGCCCTGCCACCCTTCCCTCCCCGTaGGGTTTCGAGGTCTGGATT +
Preference number: 4 (lower is better)
Translates to: AQAVSEPPECLSSPGSPATLPSP*GFEVWI
Trigger: AATCCAGACCTCGAAACCCCACGGGGAGGGAAGGGT...GGCAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGAGACAGCCTGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR CCA 90 bp GTGGGACAAACAGGAACCACCGGGTGGATGGTCGGCCGTGCCCACCCGCCTCAGACCCTTCCCTCCCCGTaGGGTTTCGAGGTCTGGATT +
Preference number: 4 (lower is better)
Translates to: VGQTGTTGWMVGRAHPPQTLPSP*GFEVWI
Trigger: AATCCAGACCTCGAAACCCCACGGGGAGGGAAGGGT...CTGAGGCGGGTGGGCACGGCCGACCATCCACCCGGTGGTTCCTGTTTGTCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR CCA 90 bp AATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGGCCCCGGGCTCAGCTaGGTGTGCCTGGCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: NRKRLGLPPPSSPLNTGSGPGLS*VCLACR
Trigger: TCTGCAGGCCAGGCACACCCAGCTGAGCCCGGGGCC...ACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp GGAGCCGCTGCTTCTGCATCCAGAATATGGGGCAGGAACCTGCCCATCCTCCTTGGCCCCGGGCTCAGCTaGGTGTGCCTGGCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: GAAASASRIWGRNLPILLGPGLS*VCLACR
Trigger: TCTGCAGGCCAGGCACACCCAGCTGAGCCCGGGGCC...AAGGAGGATGGGCAGGTTCCTGCCCCATATTCTGGATGCAGAAGCAGCGGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CCA 90 bp CCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGGCTGGTGGGTGGTGCTaGCTGGCCCCGGGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PTSHNRKRLGLPPPSSPLAGGWC*LAPGSA
Trigger: AGCTGAGCCCGGGGCCAGCCAGCACCACCCACCAGC...CAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp AATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTCCCACAGGCCCCAGCTaGTGGGTGGTGCTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: NRKRLGLPPPSSPLNTGSPTGPS*WVVLAG
Trigger: GCCAGCCAGCACCACCCACCAGCTGGGGCCTGTGGG...ACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp TCTGGGAGCCGCTGCTTCTGCATCCAGAATATGGGGCAGGAACCTGCCCATCCTCCCACAGGCCCCAGCTaGTGGGTGGTGCTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SGSRCFCIQNMGQEPAHPPTGPS*WVVLAG
Trigger: GCCAGCCAGCACCACCCACCAGCTGGGGCCTGTGGG...AGGATGGGCAGGTTCCTGCCCCATATTCTGGATGCAGAAGCAGCGGCTCCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CCA 90 bp GGACAAACAGGAACCACCGGGTGGATGGTCGGCCGTGCCCACCCGCCTCAGGCTCCGGTGGAAGAAGACTaGGACCATGGACACTGCCTC +
Preference number: 4 (lower is better)
Translates to: GQTGTTGWMVGRAHPPQAPVEED*DHGHCL
Trigger: GAGGCAGTGTCCATGGTCCCAGTCTTCTTCCACCGG...AGCCTGAGGCGGGTGGGCACGGCCGACCATCCACCCGGTGGTTCCTGTTTGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR CCA 90 bp GGCTCAGGCTGTCTCGGAGCCCCCGGAGTGCTTGAGCTCTCCTGGAAGCCCTGCCCGGTGGAAGAAGACTaGGACCATGGACACTGCCTC +
Preference number: 4 (lower is better)
Translates to: GSGCLGAPGVLELSWKPCPVEED*DHGHCL
Trigger: GAGGCAGTGTCCATGGTCCCAGTCTTCTTCCACCGG...GCAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGAGACAGCCTGAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR CCA 90 bp GAGTTCCTGCTGGGACGAGGGAGGGGTCTTTGGGTGAGCCTGGGGAGCCTCAACAGCCCCGAGATCCACTaGCGGTCACAGCCTCGCTGT +
Preference number: 4 (lower is better)
Translates to: EFLLGRGRGLWVSLGSLNSPEIH*RSQPRC
Trigger: ACAGCGAGGCTGTGACCGCCAGTGGATCTCGGGGCT...GTTGAGGCTCCCCAGGCTCACCCAAAGACCCCTCCCTCGTCCCAGCAGGAACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR CCA 90 bp CTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCCTGTTCCCTGGCACCTaGAGTTGCAGGGACACACCC +
Preference number: 4 (lower is better)
Translates to: LGLPPPSSPLNTGSVSPSLFPGT*SCRDTP
Trigger: GGGTGTGTCCCTGCAACTCCAGGTGCCAGGGAACAG...GGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CCA 90 bp ACGGTGATGGCCGGGCCAGGCCCTAGCAGCAGCAGGAGTTCCTGCTGGGACGAGGAGAGACCCAACCTCTaGGAGCCGCTGCTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: TVMAGPGPSSSRSSCWDEERPNL*EPLLLH
Trigger: ATGCAGAAGCAGCGGCTCCCAGAGGTTGGGTCTCTC...CTCGTCCCAGCAGGAACTCCTGCTGCTGCTAGGGCCTGGCCCGGCCATCACCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR TCA 90 bp GAGGGGTCTTTGGGTGAGCCTGGGGAGCCTCAACTGTTAGCAGTCGAATCCTCTCCTTCCCGAGGGCTCTaGTCTGGAGGCGCCACCGCC +
Preference number: 4 (lower is better)
Translates to: EGSLGEPGEPQLLAVESSPSRGL*SGGATA
Trigger: GGCGGTGGCGCCTCCAGATCAGAGCCCTCGGGAAGG...AGAGGATTCGACTGCTAACAGTTGAGGCTCCCCAGGCTCACCCAAAGACCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331952.6
ENST00000557649.6
ENST00000619279.4
ENST00000630349.2
CDS-3UTR TCA 90 bp GAGTTCCTGCTGGGACGAGGGAGGGGTCTTTGGGTGAGCCTGGGGAGCCTCAACCAGGCCCTTGAGAGTTaGGCCTCGGGCAGAACTGCA +
Preference number: 4 (lower is better)
Translates to: EFLLGRGRGLWVSLGSLNQALES*ASGRTA
Trigger: TGCAGTTCTGCCCGAGGCTCAACTCTCAAGGGCCTG...GTTGAGGCTCCCCAGGCTCACCCAAAGACCCCTCCCTCGTCCCAGCAGGAACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331952.6
ENST00000557649.6
ENST00000619279.4
ENST00000630349.2
CDS-3UTR TCA 90 bp GAGTTCCTGCTGGGACGAGGGAGGGGTCTTTGGGTGAGCCTGGGGAGCCTCAACGCACACACACAGCCCTaGCAGTGGCTGTGGCGTTCT +
Preference number: 4 (lower is better)
Translates to: EFLLGRGRGLWVSLGSLNAHTQP*QWLWRS
Trigger: AGAACGCCACAGCCACTGTCAGGGCTGTGTGTGTGC...GTTGAGGCTCCCCAGGCTCACCCAAAGACCCCTCCCTCGTCCCAGCAGGAACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331952.6
ENST00000619279.4
CDS-3UTR TCA 90 bp TCGAGGTCTGGATTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTGGCCGCGCCAGCAGGTaGGGGCCACGTGCCGCAGGT +
Preference number: 4 (lower is better)
Translates to: SRSGFPTSHNRKRLGLPPGRASR*GPRAAG
Trigger: ACCTGCGGCACGTGGCCCTCACCTGCTGGCGCGGCC...AGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAATCCAGACCTCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR TCA 90 bp CCAGGCCCTAGCAGCAGCAGGAGTTCCTGCTGGGACGAGGGAGGGGTCTTTGGGCAAAGGGACCCACCTTaGCAACCAGACCCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: PGPSSSRSSCWDEGGVFGQRDPP*QPDPSL
Trigger: GAGGGAAGGGTCTGGTTGTCAAGGTGGGTCCCTTTG...CCCAAAGACCCCTCCCTCGTCCCAGCAGGAACTCCTGCTGCTGCTAGGGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR TCA 90 bp AATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTCCTGAGGGCCCCGGCTaGCTTGCTGCTCTCGGGACA +
Preference number: 4 (lower is better)
Translates to: NRKRLGLPPPSSPLNTGSPEGPG*LAALGT
Trigger: TGTCCCGAGAGCAGCAAGTCAGCCGGGGCCCTCAGG...ACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR GCA 90 bp TTCTGGAAACAGCCCCTTTTGTTACCTCCACCCGCAACTCTGGGCTCCCTGGATCCTCCCTCTCTGCCCTaGACACCCGCGGGCCCCACG +
Preference number: 4 (lower is better)
Translates to: FWKQPLLLPPPATLGSLDPPSLP*TPAGPT
Trigger: CGTGGGGCCCGCGGGTGTGCAGGGCAGAGAGGGAGG...ATCCAGGGAGCCCAGAGTTGCGGGTGGAGGTAACAAAAGGGGCTGTTTCCAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR GCA 90 bp AGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGCCTCTGGGCGGTGGTaGTCCGGCCGGCTCCGTTTC +
Preference number: 4 (lower is better)
Translates to: SHNRKRLGLPPPSSPLNTASGRW*SGRLRF
Trigger: GAAACGGAGCCGGCCGGAGCACCACCGCCCAGAGGC...CGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR GCA 90 bp GATTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCGCCTCTGGGCGGTGGTaGTCCGGCCGGCTCCGTTTC +
Preference number: 4 (lower is better)
Translates to: DSPQAIIAKGWVCLLRAAASGRW*SGRLRF
Trigger: GAAACGGAGCCGGCCGGAGCACCACCGCCCAGAGGC...GGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR GCA 90 bp GAGGGGTCTTTGGGTGAGCCTGGGGAGCCTCAACTGTTAGCAGTCGAATCCTCTGCCTCTGGGCGGTGGTaGTCCGGCCGGCTCCGTTTC +
Preference number: 4 (lower is better)
Translates to: EGSLGEPGEPQLLAVESSASGRW*SGRLRF
Trigger: GAAACGGAGCCGGCCGGAGCACCACCGCCCAGAGGC...AGAGGATTCGACTGCTAACAGTTGAGGCTCCCCAGGCTCACCCAAAGACCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR GCA 90 bp AGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGTCCTCCAGTGCCGTTaGCACGGGCTTGGCCCGGCC +
Preference number: 4 (lower is better)
Translates to: SHNRKRLGLPPPSSPLNTVLQCR*HGLGPA
Trigger: GGCCGGGCCAAGCCCGTGGCAACGGCACTGGAGGAC...CGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR GCA 90 bp GATTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCGTCCTGCCCGTCCTaGCCGTCAGAGCCGCAGGAG +
Preference number: 4 (lower is better)
Translates to: DSPQAIIAKGWVCLLRAAPSCPS*PSEPQE
Trigger: CTCCTGCGGCTCTGACGGGCAGGACGGGCAGGACGG...GGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR GCA 90 bp CTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCCAATGGCCCTGGGGCTaGAGATGCAGGTTGTGCCTT +
Preference number: 4 (lower is better)
Translates to: LGLPPPSSPLNTGSVSPSQWPWG*RCRLCL
Trigger: AAGGCACAACCTGCATCTGCAGCCCCAGGGCCATTG...GGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR GCA 90 bp GCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCTCAAGAGGTCTCCTGGGCAGTTCTaGCTGGTGTCTAACCGTGGG +
Preference number: 4 (lower is better)
Translates to: ASSEQPLEHGQCVPLLKRSPGQF*LVSNRG
Trigger: CCCACGGTTAGACACCAGGCAGAACTGCCCAGGAGA...CCTCTTGAGGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR GCA 90 bp GCTCAGGCTGTCTCGGAGCCCCCGGAGTGCTTGAGCTCTCCTGGAAGCCCTGCCGGCACGTCCTTGCGTTaGCTTTGCAGTGGACAGACA +
Preference number: 4 (lower is better)
Translates to: AQAVSEPPECLSSPGSPAGTSLR*LCSGQT
Trigger: TGTCTGTCCACTGCAAAGGCAACGCAAGGACGTGCC...GGCAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGAGACAGCCTGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CCA 90 bp GATTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCTTGGCCTCTGGGCGGTaGTGCTCCGGCCGGCTCCGT +
Preference number: 4 (lower is better)
Translates to: DSPQAIIAKGWVCLLRAALASGR*CSGRLR
Trigger: ACGGAGCCGGCCGGAGCACCACCGCCCAGAGGCCAA...GGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp AGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGTTGGCCTCTGGGCGGTaGTGCTCCGGCCGGCTCCGT +
Preference number: 4 (lower is better)
Translates to: SHNRKRLGLPPPSSPLNTLASGR*CSGRLR
Trigger: ACGGAGCCGGCCGGAGCACCACCGCCCAGAGGCCAA...CGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp AGAGGATGGCACCTCACATCAAAGGGACCCACCTTGACAACCAGACCCTTCCCTCTGGGGCTTGGCCTCTaGGCGGTGGTGCTCCGGCCG +
Preference number: 4 (lower is better)
Translates to: RGWHLTSKGPTLTTRPFPLGLGL*AVVLRP
Trigger: CGGCCGGAGCACCACCGCCCAGAGGCCAAGCCCCAG...AGGGAAGGGTCTGGTTGTCAAGGTGGGTCCCTTTGATGTGAGGTGCCATCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp CCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGCCGTTGCCACGGGCTTaGCCCGGCCGCAGTATAGGC +
Preference number: 4 (lower is better)
Translates to: PTSHNRKRLGLPPPSSPLPLPRA*PGRSIG
Trigger: GCCTATACTGCGGCCGGGCCAAGCCCGTGGCAACGG...CAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp CCAGGCCCTAGCAGCAGCAGGAGTTCCTGCTGGGACGAGGGAGGGGTCTTTGGGACCCTTCCCTCCCCGTaGGGTTTCGAGGTCTGGATT +
Preference number: 4 (lower is better)
Translates to: PGPSSSRSSCWDEGGVFGTLPSP*GFEVWI
Trigger: AATCCAGACCTCGAAACCCCACGGGGAGGGAAGGGT...CCCAAAGACCCCTCCCTCGTCCCAGCAGGAACTCCTGCTGCTGCTAGGGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp GATTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCGGCCCCGGGCTCAGCTaGGTGTGCCTGGCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: DSPQAIIAKGWVCLLRAAGPGLS*VCLACR
Trigger: TCTGCAGGCCAGGCACACCCAGCTGAGCCCGGGGCC...GGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp GAGGGGTCTTTGGGTGAGCCTGGGGAGCCTCAACTGTTAGCAGTCGAATCCTCTGGCCCCGGGCTCAGCTaGGTGTGCCTGGCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: EGSLGEPGEPQLLAVESSGPGLS*VCLACR
Trigger: TCTGCAGGCCAGGCACACCCAGCTGAGCCCGGGGCC...AGAGGATTCGACTGCTAACAGTTGAGGCTCCCCAGGCTCACCCAAAGACCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp AGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGCTGGTGGGTGGTGCTaGCTGGCCCCGGGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SHNRKRLGLPPPSSPLNTAGGWC*LAPGSA
Trigger: AGCTGAGCCCGGGGCCAGCCAGCACCACCCACCAGC...CGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp GAGGGGTCTTTGGGTGAGCCTGGGGAGCCTCAACTGTTAGCAGTCGAATCCTCTCCCACAGGCCCCAGCTaGTGGGTGGTGCTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: EGSLGEPGEPQLLAVESSPTGPS*WVVLAG
Trigger: GCCAGCCAGCACCACCCACCAGCTGGGGCCTGTGGG...AGAGGATTCGACTGCTAACAGTTGAGGCTCCCCAGGCTCACCCAAAGACCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp TTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCCAACCACGGGCTTGGTaGCCCCAGGAGGAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: FPTSHNRKRLGLPPPSSPQPRAW*PQEELG
Trigger: GCCCAGCTCCTCCTGGGGCCACCAAGCCCGTGGTTG...GGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR CCA 90 bp CACCTTGACAACCAGACCCTTCCCTCCCCGTGGGGTTTCGAGGTCTGGATTCCCCGTCAACCACGGGCTTaGTGGCCCCAGGAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: HLDNQTLPSPWGFEVWIPRQPRA*WPQEEL
Trigger: CAGCTCCTCCTGGGGCCACCAAGCCCGTGGTTGACG...GGGAATCCAGACCTCGAAACCCCACGGGGAGGGAAGGGTCTGGTTGTCAAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR CCA 90 bp TCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCTCAAGAGGGTGCACCTGGGCAGTTCTGCCTaGTGTCTAACCGTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: SEQPLEHGQCVPLLKRVHLGSSA*CLTVGL
Trigger: GAGGCCCACGGTTAGACACCAGGCAGAACTGCCCAG...GTGCACCCTCTTGAGGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR CCA 90 bp GCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCTCAAGAGGTCCCTGTGTCTCTCCTaGGCAGTTCTGCCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: ASSEQPLEHGQCVPLLKRSLCLS*AVLPGV
Trigger: GACACCAGGCAGAACTGCCCAGGAGAGACACAGGGA...CCTCTTGAGGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR CCA 90 bp GATTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCGAACCACCGGGTGGATaGTCGGCCGTGCCCACCCGC +
Preference number: 4 (lower is better)
Translates to: DSPQAIIAKGWVCLLRAAEPPGG*SAVPTR
Trigger: GCGGGTGGGCACGGCCGACCATCCACCCGGTGGTTC...GGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR CCA 90 bp TCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCTCAAGAGGGTGCTGTTCCCTGGCACCTaGAGTTGCAGGGACACACCC +
Preference number: 4 (lower is better)
Translates to: SSEQPLEHGQCVPLLKRVLFPGT*SCRDTP
Trigger: GGGTGTGTCCCTGCAACTCCAGGTGCCAGGGAACAG...CACCCTCTTGAGGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CCA 90 bp TCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCTCAAGAGGGTGCACTCCAGCCCTCTCTGCTaGATCGCAAAGCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: SEQPLEHGQCVPLLKRVHSSPLC*IAKLGQ
Trigger: CTGGCCCAGCTTTGCGATCCAGCAGAGAGGGCTGGA...GTGCACCCTCTTGAGGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000630349.2
CDS-3UTR TCA 90 bp GAAACAGCCCCTTTTGTTACCTCCACCCGCAACTCTGGGCTCCCTGGATTCCAACCTTCCCGAGGGCTCTaGTCTGGAGGCGCCACCGCC +
Preference number: 4 (lower is better)
Translates to: ETAPFVTSTRNSGLPGFQPSRGL*SGGATA
Trigger: GGCGGTGGCGCCTCCAGATCAGAGCCCTCGGGAAGG...TTGGAATCCAGGGAGCCCAGAGTTGCGGGTGGAGGTAACAAAAGGGGCTGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR TCA 90 bp TTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCAGCCCCCGGAGTGCTTaGGCTCTCCTGGAAGCCCTG +
Preference number: 4 (lower is better)
Translates to: FPTSHNRKRLGLPPPSSPSPRSA*ALLEAL
Trigger: CAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCT...GGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR TCA 90 bp AGACCTGGGCTCAGAGGATGGCACCTCACATCAAAGGGACCCACCTTGACAACCAGAGGGTGCACACGGTaGTGGCCGGGCCAGGCCCTA +
Preference number: 4 (lower is better)
Translates to: RPGLRGWHLTSKGPTLTTRGCTR*WPGQAL
Trigger: TAGGGCCTGGCCCGGCCATCACCGTGTGCACCCTCT...GGTTGTCAAGGTGGGTCCCTTTGATGTGAGGTGCCATCCTCTGAGCCCAGGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR TCA 90 bp CCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGCTCCGAGCAGCCCCTTaGACACGGGCAGTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: PTSHNRKRLGLPPPSSPLLRAAP*TRAVCP
Trigger: GGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAG...CAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR TCA 90 bp AGACCTGGGCTCAGAGGATGGCACCTCACATCAAAGGGACCCACCTTGACAACCCCTGAGGGCCCCGGCTaGCTTGCTGCTCTCGGGACA +
Preference number: 4 (lower is better)
Translates to: RPGLRGWHLTSKGPTLTTPEGPG*LAALGT
Trigger: TGTCCCGAGAGCAGCAAGTCAGCCGGGGCCCTCAGG...GGTTGTCAAGGTGGGTCCCTTTGATGTGAGGTGCCATCCTCTGAGCCCAGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR TCA 90 bp CCAGGCCCTAGCAGCAGCAGGAGTTCCTGCTGGGACGAGGGAGGGGTCTTTGGGCGGCTCACAACCAGCTaGGAAGTTTCCATTACGGCG +
Preference number: 4 (lower is better)
Translates to: PGPSSSRSSCWDEGGVFGRLTTS*EVSITA
Trigger: CGCCGTAATGGAAACTTCTCAGCTGGTTGTGAGCCG...CCCAAAGACCCCTCCCTCGTCCCAGCAGGAACTCCTGCTGCTGCTAGGGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR TCA 90 bp GTGGGACAAACAGGAACCACCGGGTGGATGGTCGGCCGTGCCCACCCGCCTCAGTTCCAAAGCTGGAAGTaGCCCTGGAGACCACTTCAC +
Preference number: 4 (lower is better)
Translates to: VGQTGTTGWMVGRAHPPQFQSWK*PWRPLH
Trigger: GTGAAGTGGTCTCCAGGGTCACTTCCAGCTTTGGAA...CTGAGGCGGGTGGGCACGGCCGACCATCCACCCGGTGGTTCCTGTTTGTCCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR GCA 90 bp GCAATCCGGCGACAAAGCCACAACCACAGACGGTCTCCGGGACCCACAGGCCCCAGGGCTCACGGCTCCTaGTGCAGTCCTCATTTACTG +
Preference number: 4 (lower is better)
Translates to: AIRRQSHNHRRSPGPTGPRAHGS*CSPHLL
Trigger: CAGTAAATGAGGACTGCAGCAGGAGCCGTGAGCCCT...GGGGCCTGTGGGTCCCGGAGACCGTCTGTGGTTGTGGCTTTGTCGCCGGATTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR GCA 90 bp AGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGTTGTCCTCCCTCTCTaGCCTGCACACCCGCGGGCC +
Preference number: 4 (lower is better)
Translates to: SHNRKRLGLPPPSSPLNTVVLPL*PAHPRA
Trigger: GGCCCGCGGGTGTGCAGGGCAGAGAGGGAGGACAAC...CGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR GCA 90 bp AGAGGATGGCACCTCACATCAAAGGGACCCACCTTGACAACCAGACCCTTCCCTGTCCTCCAGTGCCGTTaGCACGGGCTTGGCCCGGCC +
Preference number: 4 (lower is better)
Translates to: RGWHLTSKGPTLTTRPFPVLQCR*HGLGPA
Trigger: GGCCGGGCCAAGCCCGTGGCAACGGCACTGGAGGAC...AGGGAAGGGTCTGGTTGTCAAGGTGGGTCCCTTTGATGTGAGGTGCCATCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR GCA 90 bp AGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGCCACGTGCCGCAGGTaGAGGACAAGGCCGAGGAGC +
Preference number: 4 (lower is better)
Translates to: SHNRKRLGLPPPSSPLNTATCRR*RTRPRS
Trigger: GCTCCTCGGCCTTGTCCTGCACCTGCGGCACGTGGC...CGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR GCA 90 bp GAGGGGTCTTTGGGTGAGCCTGGGGAGCCTCAACTGTTAGCAGTCGAATCCTCTCGGGGCCGCCTGCTGTaGCCCCCATGTCCGATCTCA +
Preference number: 4 (lower is better)
Translates to: EGSLGEPGEPQLLAVESSRGRLL*PPCPIS
Trigger: TGAGATCGGACATGGGGGGCACAGCAGGCGGCCCCG...AGAGGATTCGACTGCTAACAGTTGAGGCTCCCCAGGCTCACCCAAAGACCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR GCA 90 bp GGCTCCCTTCAGCTCTGCAATCCGGCGACAAAGCCACAACCACAGACGGTCTCCGGTGTCTGGGCCCCTTaGTGTCCCCTCGGCTTCTAC +
Preference number: 4 (lower is better)
Translates to: GSLQLCNPATKPQPQTVSGVWAP*CPLGFY
Trigger: GTAGAAGCCGAGGGGACAGCAAGGGGCCCAGACACC...GGAGACCGTCTGTGGTTGTGGCTTTGTCGCCGGATTGCAGAGCTGAAGGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR GCA 90 bp AAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCGGTGTCTGGGCCCCTTaGTGTCCCCTCGGCTTCTAC +
Preference number: 4 (lower is better)
Translates to: KRLGLPPPSSPLNTGSVSGVWAP*CPLGFY
Trigger: GTAGAAGCCGAGGGGACAGCAAGGGGCCCAGACACC...GGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR GCA 90 bp CACCTTGACAACCAGACCCTTCCCTCCCCGTGGGGTTTCGAGGTCTGGATTCCCTGGGTGTGCCTGGCCTaGAGAGCTGGGCACAGATGG +
Preference number: 4 (lower is better)
Translates to: HLDNQTLPSPWGFEVWIPWVCLA*RAGHRW
Trigger: CCATCTGTGCCCAGCTCTGCAGGCCAGGCACACCCA...GGGAATCCAGACCTCGAAACCCCACGGGGAGGGAAGGGTCTGGTTGTCAAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR GCA 90 bp AGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGCCCCGGCTGACTTGCTaGTCTCGGGACAGCCCGGTC +
Preference number: 4 (lower is better)
Translates to: SHNRKRLGLPPPSSPLNTPRLTC*SRDSPV
Trigger: GACCGGGCTGTCCCGAGAGCAGCAAGTCAGCCGGGG...CGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR GCA 90 bp TCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCTCAAGAGGGTGCACGGCTCCCTTCAGCTCTaGAATCCGGCGACAAAGCCA +
Preference number: 4 (lower is better)
Translates to: SEQPLEHGQCVPLLKRVHGSLQL*NPATKP
Trigger: TGGCTTTGTCGCCGGATTGCAGAGCTGAAGGGAGCC...GTGCACCCTCTTGAGGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR GCA 90 bp CACGTAGGGTCTGGAGAGGCCCCTGGTGTTTGTCATCCACAGGGCTCCCTTCAGGGCTTGGTCAGCCCCTaGCCGAGTGGACACATCCAC +
Preference number: 4 (lower is better)
Translates to: HVGSGEAPGVCHPQGSLQGLVSP*PSGHIH
Trigger: GTGGATGTGTCCACTCGGGCAGGGGCTGACCAAGCC...CTGAAGGGAGCCCTGTGGATGACAAACACCAGGGGCCTCTCCAGACCCTACGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR GCA 90 bp CCAGGCCCTAGCAGCAGCAGGAGTTCCTGCTGGGACGAGGGAGGGGTCTTTGGGTCCTTGCGTTGCCTTTaGAGTGGACAGACAGCAGCG +
Preference number: 4 (lower is better)
Translates to: PGPSSSRSSCWDEGGVFGSLRCL*SGQTAA
Trigger: CGCTGCTGTCTGTCCACTGCAAAGGCAACGCAAGGA...CCCAAAGACCCCTCCCTCGTCCCAGCAGGAACTCCTGCTGCTGCTAGGGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CCA 90 bp TCGAGGTCTGGATTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCTGGGGCTTGGCCTCTaGGCGGTGGTGCTCCGGCCG +
Preference number: 4 (lower is better)
Translates to: SRSGFPTSHNRKRLGLPPLGLGL*AVVLRP
Trigger: CGGCCGGAGCACCACCGCCCAGAGGCCAAGCCCCAG...AGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAATCCAGACCTCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp AGAGGATGGCACCTCACATCAAAGGGACCCACCTTGACAACCAGACCCTTCCCTCGCCTCGAGGTCCTCTaGGGCTTGGCCTCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: RGWHLTSKGPTLTTRPFPRLEVL*GLASGR
Trigger: CCGCCCAGAGGCCAAGCCCCAGAGGACCTCGAGGCG...AGGGAAGGGTCTGGTTGTCAAGGTGGGTCCCTTTGATGTGAGGTGCCATCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp CACCTTGACAACCAGACCCTTCCCTCCCCGTGGGGTTTCGAGGTCTGGATTCCCGTGGACGGTCACCGCTaGGGGTTCTCGGAACCACAC +
Preference number: 4 (lower is better)
Translates to: HLDNQTLPSPWGFEVWIPVDGHR*GFSEPH
Trigger: GTGTGGTTCCGAGAACCCCCAGCGGTGACCGTCCAC...GGGAATCCAGACCTCGAAACCCCACGGGGAGGGAAGGGTCTGGTTGTCAAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp CAGGGCTCCCTTCAGCTCTGCAATCCGGCGACAAAGCCACAACCACAGACGGTCGTGCTTGAGCTCTCCTaGAAGCCCTGCCCGTCCTGC +
Preference number: 4 (lower is better)
Translates to: QGSLQLCNPATKPQPQTVVLELS*KPCPSC
Trigger: GCAGGACGGGCAGGGCTTCCAGGAGAGCTCAAGCAC...GACCGTCTGTGGTTGTGGCTTTGTCGCCGGATTGCAGAGCTGAAGGGAGCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR CCA 90 bp TTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCCGAGGGAGGGGTCTTTaGGTGAGCCTGGGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: FPTSHNRKRLGLPPPSSPRGRGL*VSLGSL
Trigger: GAGGCTCCCCAGGCTCACCCAAAGACCCCTCCCTCG...GGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp GAGTTCCTGCTGGGACGAGGGAGGGGTCTTTGGGTGAGCCTGGGGAGCCTCAACAGCAGGAGTTCCTGCTaGGACGAGGGAGGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: EFLLGRGRGLWVSLGSLNSRSSC*DEGGVF
Trigger: AAAGACCCCTCCCTCGTCCCAGCAGGAACTCCTGCT...GTTGAGGCTCCCCAGGCTCACCCAAAGACCCCTCCCTCGTCCCAGCAGGAACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp CCAGGCCCTAGCAGCAGCAGGAGTTCCTGCTGGGACGAGGGAGGGGTCTTTGGGCCTGGGCTCAGAGGATaGCACCTCACATCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: PGPSSSRSSCWDEGGVFGPGLRG*HLTSKG
Trigger: TCCCTTTGATGTGAGGTGCCATCCTCTGAGCCCAGG...CCCAAAGACCCCTCCCTCGTCCCAGCAGGAACTCCTGCTGCTGCTAGGGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp CTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCCCTGGGCTCAGAGGATaGCACCTCACATCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: LGLPPPSSPLNTGSVSPSPGLRG*HLTSKG
Trigger: TCCCTTTGATGTGAGGTGCCATCCTCTGAGCCCAGG...GGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp AGACCTGGGCTCAGAGGATGGCACCTCACATCAAAGGGACCCACCTTGACAACCCAACCACGGGCTTGGTaGCCCCAGGAGGAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: RPGLRGWHLTSKGPTLTTQPRAW*PQEELG
Trigger: GCCCAGCTCCTCCTGGGGCCACCAAGCCCGTGGTTG...GGTTGTCAAGGTGGGTCCCTTTGATGTGAGGTGCCATCCTCTGAGCCCAGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR CCA 90 bp GATTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCGGACAGCCCGGTCCATaGGGAGGCCGTCAACCACGG +
Preference number: 4 (lower is better)
Translates to: DSPQAIIAKGWVCLLRAAGQPGP*GGRQPR
Trigger: CCGTGGTTGACGGCCTCCCCATGGACCGGGCTGTCC...GGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR CCA 90 bp AATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGCTGTACCTCCGGGGTaGCTCAGGCCTGATCAGCCC +
Preference number: 4 (lower is better)
Translates to: NRKRLGLPPPSSPLNTGSAVPPG*LRPDQP
Trigger: GGGCTGATCAGGCCTGAGCCACCCCGGAGGTACAGC...ACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR CCA 90 bp CTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCACTGGAACATGGTCCTaGGCTCCTGCTGGTGCTGTA +
Preference number: 4 (lower is better)
Translates to: LGLPPPSSPLNTGSVSPSTGTWS*APAGAV
Trigger: TACAGCACCAGCAGGAGCCCAGGACCATGTTCCAGT...GGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR CCA 90 bp CACCTTGACAACCAGACCCTTCCCTCCCCGTGGGGTTTCGAGGTCTGGATTCCCCCCCCACGTAGGGTCTaGAGAGGCCCCTGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: HLDNQTLPSPWGFEVWIPPPRRV*RGPWCL
Trigger: CAAACACCAGGGGCCTCTCCAGACCCTACGTGGGGG...GGGAATCCAGACCTCGAAACCCCACGGGGAGGGAAGGGTCTGGTTGTCAAGGTG
62% GC, longest homopolymer 8 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR CCA 90 bp CCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGCAGCCCCTGCCCGAGTaGACACATCCACTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: PTSHNRKRLGLPPPSSPLQPLPE*THPLPG
Trigger: GCCTGGGAGTGGATGTGTCCACTCGGGCAGGGGCTG...CAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CCA 90 bp TTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCCAGCCCCTGCCCGAGTaGACACATCCACTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: FPTSHNRKRLGLPPPSSPQPLPE*THPLPG
Trigger: GCCTGGGAGTGGATGTGTCCACTCGGGCAGGGGCTG...GGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CCA 90 bp GCCTGCAGGAGATGGGGAGGTTCCAGGCGCCCAGGACATCCGCTTTGGCCACTGACTTCACCTGTTCCCTaGCACCTGGAGTTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: ACRRWGGSRRPGHPLWPLTSPVP*HLELQG
Trigger: TCCCTGCAACTCCAGGTGCCAGGGAACAGGTGAAGT...CAGTGGCCAAAGCGGATGTCCTGGGCGCCTGGAACCTCCCCATCTCCTGCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CCA 90 bp GAGTTCCTGCTGGGACGAGGGAGGGGTCTTTGGGTGAGCCTGGGGAGCCTCAACCTCCACCCGCAACTCTaGGCTCCCTGGATTCCAAAG +
Preference number: 4 (lower is better)
Translates to: EFLLGRGRGLWVSLGSLNLHPQL*APWIPK
Trigger: CTTTGGAATCCAGGGAGCCCAGAGTTGCGGGTGGAG...GTTGAGGCTCCCCAGGCTCACCCAAAGACCCCTCCCTCGTCCCAGCAGGAACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CCA 90 bp TTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCACAGACAGCAGCGGCTaGGGGAGATCGGCCTGTGCG +
Preference number: 4 (lower is better)
Translates to: FPTSHNRKRLGLPPPSSPTDSSG*GRSACA
Trigger: CGCACAGGCCGATCTCCCCCAGCCGCTGCTGTCTGT...GGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
3UTR CAA 72 bp GCAGCAGGAGTTCCTGCTGGGACGAGGGAGGGGTCTTaGGGTGAGCCTGGGGAGCCTCAACTGTTAGCAGTC +
Preference number: 4 (lower is better)
Translates to: AAGVPAGTREGS*GEPGEPQLLAV
Trigger: GACTGCTAACAGTTGAGGCTCCCCAGGCTCACCCAAAGACCCCTCCCTCGTCCCAGCAGGAACTCCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR TCA 90 bp TCGAGGTCTGGATTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCTTCCCGAGGGCTCTaGTCTGGAGGCGCCACCGCC +
Preference number: 4 (lower is better)
Translates to: SRSGFPTSHNRKRLGLPPPSRGL*SGGATA
Trigger: GGCGGTGGCGCCTCCAGATCAGAGCCCTCGGGAAGG...AGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAATCCAGACCTCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331952.6
ENST00000557649.6
ENST00000619279.4
ENST00000630349.2
CDS-3UTR TCA 90 bp AAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCAGGCCCTTGAGAGTTaGGCCTCGGGCAGAACTGCA +
Preference number: 4 (lower is better)
Translates to: KRLGLPPPSSPLNTGSVSQALES*ASGRTA
Trigger: TGCAGTTCTGCCCGAGGCTCAACTCTCAAGGGCCTG...GGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331952.6
ENST00000557649.6
ENST00000619279.4
ENST00000630349.2
CDS-3UTR TCA 90 bp AATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTTGGGGCACAGTCCAGTaGGGTCCTGGACCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: NRKRLGLPPPSSPLNTGSWGTVQ*GPGPSW
Trigger: CCAAGAGGGTCCAGGACCTCACTGGACTGTGCCCCA...ACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000331952.6
ENST00000557649.6
ENST00000619279.4
ENST00000630349.2
CDS-3UTR TCA 90 bp TCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCTCAAGAGGGTGCACTCATTCTTTCTGGTCTaGCGTCGTGTCTCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: SEQPLEHGQCVPLLKRVHSFFLV*RRVSGR
Trigger: CCGGCCAGAGACACGACGTCAGACCAGAAAGAATGA...GTGCACCCTCTTGAGGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR TCA 90 bp GAGTTCCTGCTGGGACGAGGGAGGGGTCTTTGGGTGAGCCTGGGGAGCCTCAACTCATTCTTTCTGGTCTaGCGTCGTGTCTCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: EFLLGRGRGLWVSLGSLNSFFLV*RRVSGR
Trigger: CCGGCCAGAGACACGACGTCAGACCAGAAAGAATGA...GTTGAGGCTCCCCAGGCTCACCCAAAGACCCCTCCCTCGTCCCAGCAGGAACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR TCA 90 bp AGACCTGGGCTCAGAGGATGGCACCTCACATCAAAGGGACCCACCTTGACAACCAGCCCCCGGAGTGCTTaGGCTCTCCTGGAAGCCCTG +
Preference number: 4 (lower is better)
Translates to: RPGLRGWHLTSKGPTLTTSPRSA*ALLEAL
Trigger: CAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCT...GGTTGTCAAGGTGGGTCCCTTTGATGTGAGGTGCCATCCTCTGAGCCCAGGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR TCA 90 bp GAGGGGTCTTTGGGTGAGCCTGGGGAGCCTCAACTGTTAGCAGTCGAATCCTCTCTCCGAGCAGCCCCTTaGACACGGGCAGTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: EGSLGEPGEPQLLAVESSLRAAP*TRAVCP
Trigger: GGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAG...AGAGGATTCGACTGCTAACAGTTGAGGCTCCCCAGGCTCACCCAAAGACCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR TCA 90 bp GAGGGGTCTTTGGGTGAGCCTGGGGAGCCTCAACTGTTAGCAGTCGAATCCTCTGGGGTGGCTCAGGCCTaGTCAGCCCCGAGATCCACT +
Preference number: 4 (lower is better)
Translates to: EGSLGEPGEPQLLAVESSGVAQA*SAPRST
Trigger: AGTGGATCTCGGGGCTGATCAGGCCTGAGCCACCCC...AGAGGATTCGACTGCTAACAGTTGAGGCTCCCCAGGCTCACCCAAAGACCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR GCA 90 bp GAGTTCCTGCTGGGACGAGGGAGGGGTCTTTGGGTGAGCCTGGGGAGCCTCAACAGGGCTCACGGCTCCTaGTGCAGTCCTCATTTACTG +
Preference number: 4 (lower is better)
Translates to: EFLLGRGRGLWVSLGSLNRAHGS*CSPHLL
Trigger: CAGTAAATGAGGACTGCAGCAGGAGCCGTGAGCCCT...GTTGAGGCTCCCCAGGCTCACCCAAAGACCCCTCCCTCGTCCCAGCAGGAACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR GCA 90 bp TCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCTCAAGAGGGTGAGGGCTCACGGCTCCTaGTGCAGTCCTCATTTACTG +
Preference number: 4 (lower is better)
Translates to: SSEQPLEHGQCVPLLKRVRAHGS*CSPHLL
Trigger: CAGTAAATGAGGACTGCAGCAGGAGCCGTGAGCCCT...CACCCTCTTGAGGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR GCA 90 bp AATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTAGCAGCAGGAGTTCCTaGTGGGACGAGGGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: NRKRLGLPPPSSPLNTGSSSRSS*WDEGGV
Trigger: GACCCCTCCCTCGTCCCAGCAGGAACTCCTGCTGCT...ACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR GCA 90 bp AAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCGCAAAAGGCTGGGTTTaGCTCCTCCGAGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: KRLGLPPPSSPLNTGSVSAKGWV*LLRAAP
Trigger: AGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGC...GGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR GCA 90 bp TTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCGGTGTCTGGGCCCCTTaGTGTCCCCTCGGCTTCTAC +
Preference number: 4 (lower is better)
Translates to: FPTSHNRKRLGLPPPSSPGVWAP*CPLGFY
Trigger: GTAGAAGCCGAGGGGACAGCAAGGGGCCCAGACACC...GGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR GCA 90 bp GTGGGACAAACAGGAACCACCGGGTGGATGGTCGGCCGTGCCCACCCGCCTCAGTGCAGATGCAGGTTGTaGCTTCTTCCGGTGGAAGAA +
Preference number: 4 (lower is better)
Translates to: VGQTGTTGWMVGRAHPPQCRCRL*LLPVEE
Trigger: TTCTTCCACCGGAAGAAGGCACAACCTGCATCTGCA...CTGAGGCGGGTGGGCACGGCCGACCATCCACCCGGTGGTTCCTGTTTGTCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR GCA 90 bp GATTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCGGGACACACCCTGACTaGAGGGCAAAGGGAGCCGGC +
Preference number: 4 (lower is better)
Translates to: DSPQAIIAKGWVCLLRAAGTHPD*RAKGAG
Trigger: GCCGGCTCCCTTTGCCCTGCAGTCAGGGTGTGTCCC...GGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR GCA 90 bp AAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCGCCTGGGCCTGTGACTaGTCTGAGAGACCCAACCTC +
Preference number: 4 (lower is better)
Translates to: KRLGLPPPSSPLNTGSVSAWACD*SERPNL
Trigger: GAGGTTGGGTCTCTCAGAGCAGTCACAGGCCCAGGC...GGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CCA 90 bp CCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGCTGACGTCGTGTCTCTaGCCGGGAGTCAGGGCTCAC +
Preference number: 4 (lower is better)
Translates to: PTSHNRKRLGLPPPSSPLLTSCL*PGVRAH
Trigger: GTGAGCCCTGACTCCCGGCCAGAGACACGACGTCAG...CAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp ACGGTGATGGCCGGGCCAGGCCCTAGCAGCAGCAGGAGTTCCTGCTGGGACGAGCCTCCTCATTCTTTCTaGTCTGACGTCGTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: TVMAGPGPSSSRSSCWDEPPHSF*SDVVSL
Trigger: CAGAGACACGACGTCAGACCAGAAAGAATGAGGAGG...CTCGTCCCAGCAGGAACTCCTGCTGCTGCTAGGGCCTGGCCCGGCCATCACCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp TCGAGGTCTGGATTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTTTGGCCTCTGGGCGGTaGTGCTCCGGCCGGCTCCGT +
Preference number: 4 (lower is better)
Translates to: SRSGFPTSHNRKRLGLPPLASGR*CSGRLR
Trigger: ACGGAGCCGGCCGGAGCACCACCGCCCAGAGGCCAA...AGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAATCCAGACCTCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp TCGAGGTCTGGATTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCGCCTCGAGGTCCTCTaGGGCTTGGCCTCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: SRSGFPTSHNRKRLGLPPRLEVL*GLASGR
Trigger: CCGCCCAGAGGCCAAGCCCCAGAGGACCTCGAGGCG...AGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAATCCAGACCTCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp AATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGGACGGTCACCGCTaGGGGTTCTCGGAACCACAC +
Preference number: 4 (lower is better)
Translates to: NRKRLGLPPPSSPLNTGSVDGHR*GFSEPH
Trigger: GTGTGGTTCCGAGAACCCCCAGCGGTGACCGTCCAC...ACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp CCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGGTGCTTGAGCTCTCCTaGAAGCCCTGCCCGTCCTGC +
Preference number: 4 (lower is better)
Translates to: PTSHNRKRLGLPPPSSPLVLELS*KPCPSC
Trigger: GCAGGACGGGCAGGGCTTCCAGGAGAGCTCAAGCAC...CAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp GATTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCGAGGGAGGGGTCTTTaGGTGAGCCTGGGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: DSPQAIIAKGWVCLLRAARGRGL*VSLGSL
Trigger: GAGGCTCCCCAGGCTCACCCAAAGACCCCTCCCTCG...GGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp ACGGTGATGGCCGGGCCAGGCCCTAGCAGCAGCAGGAGTTCCTGCTGGGACGAGATAATCGCAAAAGGCTaGGTTTGCCTCCTCCGAGCA +
Preference number: 4 (lower is better)
Translates to: TVMAGPGPSSSRSSCWDEIIAKG*VCLLRA
Trigger: TGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTAT...CTCGTCCCAGCAGGAACTCCTGCTGCTGCTAGGGCCTGGCCCGGCCATCACCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp AAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCTGGCCTGCAGAGCTaGGCACAGATGGCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: KRLGLPPPSSPLNTGSVSPGLQS*AQMAVL
Trigger: CAGAACAGCCATCTGTGCCCAGCTCTGCAGGCCAGG...GGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp CACCTTGACAACCAGACCCTTCCCTCCCCGTGGGGTTTCGAGGTCTGGATTCCCCCTGGCCTGCAGAGCTaGGCACAGATGGCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: HLDNQTLPSPWGFEVWIPPGLQS*AQMAVL
Trigger: CAGAACAGCCATCTGTGCCCAGCTCTGCAGGCCAGG...GGGAATCCAGACCTCGAAACCCCACGGGGAGGGAAGGGTCTGGTTGTCAAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp GAGGGGTCTTTGGGTGAGCCTGGGGAGCCTCAACTGTTAGCAGTCGAATCCTCTGCCAGGCGGGGTGGCTaGGCTCCTGGGAAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: EGSLGEPGEPQLLAVESSARRGG*APGKSL
Trigger: AAGGCTTTTCCCAGGAGCCCAGCCACCCCGCCTGGC...AGAGGATTCGACTGCTAACAGTTGAGGCTCCCCAGGCTCACCCAAAGACCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR CCA 90 bp ACGGTGATGGCCGGGCCAGGCCCTAGCAGCAGCAGGAGTTCCTGCTGGGACGAGTCATTTACTGGAACATaGTCCTGGGCTCCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: TVMAGPGPSSSRSSCWDESFTGT*SWAPAG
Trigger: ACCAGCAGGAGCCCAGGACCATGTTCCAGTAAATGA...CTCGTCCCAGCAGGAACTCCTGCTGCTGCTAGGGCCTGGCCCGGCCATCACCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR CCA 90 bp AATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTCCCCCACGTAGGGTCTaGAGAGGCCCCTGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: NRKRLGLPPPSSPLNTGSPPRRV*RGPWCL
Trigger: CAAACACCAGGGGCCTCTCCAGACCCTACGTGGGGG...ACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR CCA 90 bp CCAGGCCCTAGCAGCAGCAGGAGTTCCTGCTGGGACGAGGGAGGGGTCTTTGGGTCTGCATCCAGAATATaGGGCAGGAACCTGCCCATC +
Preference number: 4 (lower is better)
Translates to: PGPSSSRSSCWDEGGVFGSASRI*GRNLPI
Trigger: GATGGGCAGGTTCCTGCCCCATATTCTGGATGCAGA...CCCAAAGACCCCTCCCTCGTCCCAGCAGGAACTCCTGCTGCTGCTAGGGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CCA 90 bp TTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCCGTCAGAACCGGGGCTaGAGGGGTGTCCCAAGCACA +
Preference number: 4 (lower is better)
Translates to: FPTSHNRKRLGLPPPSSPRQNRG*RGVPST
Trigger: TGTGCTTGGGACACCCCTCCAGCCCCGGTTCTGACG...GGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR TCA 90 bp GATTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCTGGGGCACAGTCCAGTaGGGTCCTGGACCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: DSPQAIIAKGWVCLLRAAWGTVQ*GPGPSW
Trigger: CCAAGAGGGTCCAGGACCTCACTGGACTGTGCCCCA...GGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000331952.6
ENST00000557649.6
ENST00000619279.4
ENST00000630349.2
CDS-3UTR TCA 90 bp GATTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCGCTGTCGCAGGGTGTaGACCAGAGCTGTTGCGGCT +
Preference number: 4 (lower is better)
Translates to: DSPQAIIAKGWVCLLRAARCRRV*TRAVAA
Trigger: AGCCGCAACAGCTCTGGTTCACACCCTGCGACAGCG...GGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR GCA 90 bp GATTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCTCGGAGCCCCCGGAGTaGTTGAGCTCTCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: DSPQAIIAKGWVCLLRAASEPPE*LSSPGS
Trigger: GCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGA...GGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR GCA 90 bp GAGGGGTCTTTGGGTGAGCCTGGGGAGCCTCAACTGTTAGCAGTCGAATCCTCTAGCAGCAGGAGTTCCTaGTGGGACGAGGGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: EGSLGEPGEPQLLAVESSSSRSS*WDEGGV
Trigger: GACCCCTCCCTCGTCCCAGCAGGAACTCCTGCTGCT...AGAGGATTCGACTGCTAACAGTTGAGGCTCCCCAGGCTCACCCAAAGACCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR GCA 90 bp AGACCTGGGCTCAGAGGATGGCACCTCACATCAAAGGGACCCACCTTGACAACCAGCAGCAGGAGTTCCTaGTGGGACGAGGGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: RPGLRGWHLTSKGPTLTTSSRSS*WDEGGV
Trigger: GACCCCTCCCTCGTCCCAGCAGGAACTCCTGCTGCT...GGTTGTCAAGGTGGGTCCCTTTGATGTGAGGTGCCATCCTCTGAGCCCAGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR GCA 90 bp CCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGGCAAAAGGCTGGGTTTaGCTCCTCCGAGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: PTSHNRKRLGLPPPSSPLAKGWV*LLRAAP
Trigger: AGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGC...CAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR GCA 90 bp GGAGCCGCTGCTTCTGCATCCAGAATATGGGGCAGGAACCTGCCCATCCTCCTTGCAAAAGGCTGGGTTTaGCTCCTCCGAGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: GAAASASRIWGRNLPILLAKGWV*LLRAAP
Trigger: AGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGC...AAGGAGGATGGGCAGGTTCCTGCCCCATATTCTGGATGCAGAAGCAGCGGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR GCA 90 bp GATTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCTGGGTGTGCCTGGCCTaGAGAGCTGGGCACAGATGG +
Preference number: 4 (lower is better)
Translates to: DSPQAIIAKGWVCLLRAAWVCLA*RAGHRW
Trigger: CCATCTGTGCCCAGCTCTGCAGGCCAGGCACACCCA...GGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR GCA 90 bp GGCTCCCTTCAGCTCTGCAATCCGGCGACAAAGCCACAACCACAGACGGTCTCCTGGGACCATGGACACTaGCTCGCTGGCCTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: GSLQLCNPATKPQPQTVSWDHGH*LAGLSS
Trigger: AGAGGAAAGGCCAGCGAGGCAGTGTCCATGGTCCCA...GGAGACCGTCTGTGGTTGTGGCTTTGTCGCCGGATTGCAGAGCTGAAGGGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR GCA 90 bp AATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTCCCTGGGGCTGCAGATaGAGGTTGTGCCTTCTTCCG +
Preference number: 4 (lower is better)
Translates to: NRKRLGLPPPSSPLNTGSPWGCR*RLCLLP
Trigger: CGGAAGAAGGCACAACCTGCATCTGCAGCCCCAGGG...ACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR GCA 90 bp CACGTAGGGTCTGGAGAGGCCCCTGGTGTTTGTCATCCACAGGGCTCCCTTCAGGGCTCCCTTCAGCTCTaGAATCCGGCGACAAAGCCA +
Preference number: 4 (lower is better)
Translates to: HVGSGEAPGVCHPQGSLQGSLQL*NPATKP
Trigger: TGGCTTTGTCGCCGGATTGCAGAGCTGAAGGGAGCC...CTGAAGGGAGCCCTGTGGATGACAAACACCAGGGGCCTCTCCAGACCCTACGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR GCA 90 bp AAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCTCTCCTGGGCAGTTCTaGCTGGTGTCTAACCGTGGG +
Preference number: 4 (lower is better)
Translates to: KRLGLPPPSSPLNTGSVSSPGQF*LVSNRG
Trigger: CCCACGGTTAGACACCAGGCAGAACTGCCCAGGAGA...GGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR GCA 90 bp CACCTTGACAACCAGACCCTTCCCTCCCCGTGGGGTTTCGAGGTCTGGATTCCCTCTCCTGGGCAGTTCTaGCTGGTGTCTAACCGTGGG +
Preference number: 4 (lower is better)
Translates to: HLDNQTLPSPWGFEVWIPSPGQF*LVSNRG
Trigger: CCCACGGTTAGACACCAGGCAGAACTGCCCAGGAGA...GGGAATCCAGACCTCGAAACCCCACGGGGAGGGAAGGGTCTGGTTGTCAAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR GCA 90 bp TCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCTCAAGAGGGTGCACACCTCTGGGAGCCGCTaGTTCTGCATCCAGAATATG +
Preference number: 4 (lower is better)
Translates to: SEQPLEHGQCVPLLKRVHTSGSR*FCIQNM
Trigger: CATATTCTGGATGCAGAAGCAGCGGCTCCCAGAGGT...GTGCACCCTCTTGAGGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR GCA 90 bp GAAACAGCCCCTTTTGTTACCTCCACCCGCAACTCTGGGCTCCCTGGATTCCAAGGGGAGATCGGCCTGTaGGGTGTCCCCCGTCAGAAC +
Preference number: 4 (lower is better)
Translates to: ETAPFVTSTRNSGLPGFQGEIGL*GVPRQN
Trigger: GTTCTGACGGGGGACACCGCACAGGCCGATCTCCCC...TTGGAATCCAGGGAGCCCAGAGTTGCGGGTGGAGGTAACAAAAGGGGCTGTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR GCA 90 bp AGAGGATGGCACCTCACATCAAAGGGACCCACCTTGACAACCAGACCCTTCCCTGGGGAGATCGGCCTGTaGGGTGTCCCCCGTCAGAAC +
Preference number: 4 (lower is better)
Translates to: RGWHLTSKGPTLTTRPFPGEIGL*GVPRQN
Trigger: GTTCTGACGGGGGACACCGCACAGGCCGATCTCCCC...AGGGAAGGGTCTGGTTGTCAAGGTGGGTCCCTTTGATGTGAGGTGCCATCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CCA 90 bp TTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCACTGGAACATGGTCCTaGTTCCCTCCTGGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: FPTSHNRKRLGLPPPSSPTGTWS*FPPGSP
Trigger: CGGGGAGCCAGGAGGGAACCAGGACCATGTTCCAGT...GGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000331952.6
ENST00000557649.6
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp GAGGGGTCTTTGGGTGAGCCTGGGGAGCCTCAACTGTTAGCAGTCGAATCCTCTCTGACGTCGTGTCTCTaGCCGGGAGTCAGGGCTCAC +
Preference number: 4 (lower is better)
Translates to: EGSLGEPGEPQLLAVESSLTSCL*PGVRAH
Trigger: GTGAGCCCTGACTCCCGGCCAGAGACACGACGTCAG...AGAGGATTCGACTGCTAACAGTTGAGGCTCCCCAGGCTCACCCAAAGACCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp AGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGCTGACGTCGTGTCTCTaGCCGGGAGTCAGGGCTCAC +
Preference number: 4 (lower is better)
Translates to: SHNRKRLGLPPPSSPLNTLTSCL*PGVRAH
Trigger: GTGAGCCCTGACTCCCGGCCAGAGACACGACGTCAG...CGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp AGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGTGGACGGTCACCGCTaGGGGTTCTCGGAACCACAC +
Preference number: 4 (lower is better)
Translates to: SHNRKRLGLPPPSSPLNTVDGHR*GFSEPH
Trigger: GTGTGGTTCCGAGAACCCCCAGCGGTGACCGTCCAC...CGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp GAGGGGTCTTTGGGTGAGCCTGGGGAGCCTCAACTGTTAGCAGTCGAATCCTCTGTGCTTGAGCTCTCCTaGAAGCCCTGCCCGTCCTGC +
Preference number: 4 (lower is better)
Translates to: EGSLGEPGEPQLLAVESSVLELS*KPCPSC
Trigger: GCAGGACGGGCAGGGCTTCCAGGAGAGCTCAAGCAC...AGAGGATTCGACTGCTAACAGTTGAGGCTCCCCAGGCTCACCCAAAGACCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp CCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGCCTGGCCTGCAGAGCTaGGCACAGATGGCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: PTSHNRKRLGLPPPSSPLPGLQS*AQMAVL
Trigger: CAGAACAGCCATCTGTGCCCAGCTCTGCAGGCCAGG...CAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp TCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCTCAAGAGGGTGCACGCAGTCCTCATTTACTaGAACATGGTCCTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: SEQPLEHGQCVPLLKRVHAVLIY*NMVLGS
Trigger: GGAGCCCAGGACCATGTTCCAGTAAATGAGGACTGC...GTGCACCCTCTTGAGGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR CCA 90 bp GAAACAGCCCCTTTTGTTACCTCCACCCGCAACTCTGGGCTCCCTGGATTCCAAACAGGAACCACCGGGTaGATGGTCGGCCGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: ETAPFVTSTRNSGLPGFQTGTTG*MVGRAH
Trigger: GTGGGCACGGCCGACCATCCACCCGGTGGTTCCTGT...TTGGAATCCAGGGAGCCCAGAGTTGCGGGTGGAGGTAACAAAAGGGGCTGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CCA 90 bp GAGTTCCTGCTGGGACGAGGGAGGGGTCTTTGGGTGAGCCTGGGGAGCCTCAACCAACTCTGGGCTCCCTaGATTCCAAAGCTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: EFLLGRGRGLWVSLGSLNQLWAP*IPKLEV
Trigger: CACTTCCAGCTTTGGAATCCAGGGAGCCCAGAGTTG...GTTGAGGCTCCCCAGGCTCACCCAAAGACCCCTCCCTCGTCCCAGCAGGAACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
3UTR CAA 72 bp CTCAGAGGATGGCACCTCACATCAAAGGGACCCACCTaGACAACCAGACCCTTCCCTCCCCGTGGGGTTTCG +
Preference number: 4 (lower is better)
Translates to: LRGWHLTSKGPT*TTRPFPPRGVS
Trigger: CGAAACCCCACGGGGAGGGAAGGGTCTGGTTGTCAAGGTGGGTCCCTTTGATGTGAGGTGCCATCCTCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
3UTR CAA 72 bp GAGATGGGGAGGTTCCAGGCGCCCAGGACATCCGCTTaGGCCACTGAGGCCGATTCCTTAGCAAATCGGTTC +
Preference number: 4 (lower is better)
Translates to: EMGRFQAPRTSA*ATEADSLANRF
Trigger: GAACCGATTTGCTAAGGAATCGGCCTCAGTGGCCAAAGCGGATGTCCTGGGCGCCTGGAACCTCCCCATCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR TCA 90 bp GAGGGGTCTTTGGGTGAGCCTGGGGAGCCTCAACTGTTAGCAGTCGAATCCTCTCAGGCCCTTGAGAGTTaGGCCTCGGGCAGAACTGCA +
Preference number: 4 (lower is better)
Translates to: EGSLGEPGEPQLLAVESSQALES*ASGRTA
Trigger: TGCAGTTCTGCCCGAGGCTCAACTCTCAAGGGCCTG...AGAGGATTCGACTGCTAACAGTTGAGGCTCCCCAGGCTCACCCAAAGACCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331952.6
ENST00000557649.6
ENST00000619279.4
ENST00000630349.2
CDS-3UTR TCA 90 bp AGAGGATGGCACCTCACATCAAAGGGACCCACCTTGACAACCAGACCCTTCCCTTGGGGCACAGTCCAGTaGGGTCCTGGACCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: RGWHLTSKGPTLTTRPFPWGTVQ*GPGPSW
Trigger: CCAAGAGGGTCCAGGACCTCACTGGACTGTGCCCCA...AGGGAAGGGTCTGGTTGTCAAGGTGGGTCCCTTTGATGTGAGGTGCCATCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331952.6
ENST00000557649.6
ENST00000619279.4
ENST00000630349.2
CDS-3UTR TCA 90 bp TTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCCAAAGGGACCCACCTTaGCAACCAGACCCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: FPTSHNRKRLGLPPPSSPQRDPP*QPDPSL
Trigger: GAGGGAAGGGTCTGGTTGTCAAGGTGGGTCCCTTTG...GGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR TCA 90 bp GATTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCACAGATGGCTGTTCTaGAGGTCGGGGGTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: DSPQAIIAKGWVCLLRAAHRWLF*RSGVSG
Trigger: CCCAGACACCCCCGACCTTCAGAACAGCCATCTGTG...GGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR TCA 90 bp AGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGCACAGATGGCTGTTCTaGAGGTCGGGGGTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: SHNRKRLGLPPPSSPLNTHRWLF*RSGVSG
Trigger: CCCAGACACCCCCGACCTTCAGAACAGCCATCTGTG...CGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR TCA 90 bp TTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTCGAGGACGCTGGTCTaGTTGTCCCTGTGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: FPTSHNRKRLGLPPPSSPSRTLV*LSLCLS
Trigger: GGAGAGACACAGGGACAATCAGACCAGCGTCCTCGA...GGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR GCA 90 bp AAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCAGGGCTCACGGCTCCTaGTGCAGTCCTCATTTACTG +
Preference number: 4 (lower is better)
Translates to: KRLGLPPPSSPLNTGSVSRAHGS*CSPHLL
Trigger: CAGTAAATGAGGACTGCAGCAGGAGCCGTGAGCCCT...GGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR GCA 90 bp TTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTCTCCTGGGCAGTTCTaGCTGGTGTCTAACCGTGGG +
Preference number: 4 (lower is better)
Translates to: FPTSHNRKRLGLPPPSSPSPGQF*LVSNRG
Trigger: CCCACGGTTAGACACCAGGCAGAACTGCCCAGGAGA...GGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR GCA 90 bp AAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCTCCTTGCGTTGCCTTTaGAGTGGACAGACAGCAGCG +
Preference number: 4 (lower is better)
Translates to: KRLGLPPPSSPLNTGSVSSLRCL*SGQTAA
Trigger: CGCTGCTGTCTGTCCACTGCAAAGGCAACGCAAGGA...GGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR GCA 90 bp GGCTCCCTTCAGCTCTGCAATCCGGCGACAAAGCCACAACCACAGACGGTCTCCGGCACGTCCTTGCGTTaGCTTTGCAGTGGACAGACA +
Preference number: 4 (lower is better)
Translates to: GSLQLCNPATKPQPQTVSGTSLR*LCSGQT
Trigger: TGTCTGTCCACTGCAAAGGCAACGCAAGGACGTGCC...GGAGACCGTCTGTGGTTGTGGCTTTGTCGCCGGATTGCAGAGCTGAAGGGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR GCA 90 bp TCTGGGAGCCGCTGCTTCTGCATCCAGAATATGGGGCAGGAACCTGCCCATCCTAGCCAGGCACGTCCTTaGGTTGCCTTTGCAGTGGAC +
Preference number: 4 (lower is better)
Translates to: SGSRCFCIQNMGQEPAHPSQARP*VAFAVD
Trigger: GTCCACTGCAAAGGCAACGCAAGGACGTGCCTGGCT...AGGATGGGCAGGTTCCTGCCCCATATTCTGGATGCAGAAGCAGCGGCTCCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CCA 90 bp GAGGGGTCTTTGGGTGAGCCTGGGGAGCCTCAACTGTTAGCAGTCGAATCCTCTGTCCTGGTTCCCTCCTaGCTCCCCGAGGGACAGAAA +
Preference number: 4 (lower is better)
Translates to: EGSLGEPGEPQLLAVESSVLVPS*LPEGQK
Trigger: TTTCTGTCCCTCGGGGAGCCAGGAGGGAACCAGGAC...AGAGGATTCGACTGCTAACAGTTGAGGCTCCCCAGGCTCACCCAAAGACCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000331952.6
ENST00000557649.6
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp TCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCTCAAGAGGGTGCCTCCTCATTCTTTCTaGTCTGACGTCGTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: SSEQPLEHGQCVPLLKRVPPHSF*SDVVSL
Trigger: CAGAGACACGACGTCAGACCAGAAAGAATGAGGAGG...CACCCTCTTGAGGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp AGAGGATGGCACCTCACATCAAAGGGACCCACCTTGACAACCAGACCCTTCCCTGTGGACGGTCACCGCTaGGGGTTCTCGGAACCACAC +
Preference number: 4 (lower is better)
Translates to: RGWHLTSKGPTLTTRPFPVDGHR*GFSEPH
Trigger: GTGTGGTTCCGAGAACCCCCAGCGGTGACCGTCCAC...AGGGAAGGGTCTGGTTGTCAAGGTGGGTCCCTTTGATGTGAGGTGCCATCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp AGAGGATGGCACCTCACATCAAAGGGACCCACCTTGACAACCAGACCCTTCCCTGTGCTTGAGCTCTCCTaGAAGCCCTGCCCGTCCTGC +
Preference number: 4 (lower is better)
Translates to: RGWHLTSKGPTLTTRPFPVLELS*KPCPSC
Trigger: GCAGGACGGGCAGGGCTTCCAGGAGAGCTCAAGCAC...AGGGAAGGGTCTGGTTGTCAAGGTGGGTCCCTTTGATGTGAGGTGCCATCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp TTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCAGCAGGAGTTCCTGCTaGGACGAGGGAGGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: FPTSHNRKRLGLPPPSSPSRSSC*DEGGVF
Trigger: AAAGACCCCTCCCTCGTCCCAGCAGGAACTCCTGCT...GGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp CACCTTGACAACCAGACCCTTCCCTCCCCGTGGGGTTTCGAGGTCTGGATTCCCCCTGGGCTCAGAGGATaGCACCTCACATCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: HLDNQTLPSPWGFEVWIPPGLRG*HLTSKG
Trigger: TCCCTTTGATGTGAGGTGCCATCCTCTGAGCCCAGG...GGGAATCCAGACCTCGAAACCCCACGGGGAGGGAAGGGTCTGGTTGTCAAGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp GGCTCCCTTCAGCTCTGCAATCCGGCGACAAAGCCACAACCACAGACGGTCTCCCCTGGGCTCAGAGGATaGCACCTCACATCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: GSLQLCNPATKPQPQTVSPGLRG*HLTSKG
Trigger: TCCCTTTGATGTGAGGTGCCATCCTCTGAGCCCAGG...GGAGACCGTCTGTGGTTGTGGCTTTGTCGCCGGATTGCAGAGCTGAAGGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR CCA 90 bp GATTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTGGCCTGCAGAGCTaGGCACAGATGGCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: DSPQAIIAKGWVCLLRAAPGLQS*AQMAVL
Trigger: CAGAACAGCCATCTGTGCCCAGCTCTGCAGGCCAGG...GGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp AGACCTGGGCTCAGAGGATGGCACCTCACATCAAAGGGACCCACCTTGACAACCACAGGCCTAACCCAATaGCCCTGGGGCTGCAGATGC +
Preference number: 4 (lower is better)
Translates to: RPGLRGWHLTSKGPTLTTTGLTQ*PWGCRC
Trigger: GCATCTGCAGCCCCAGGGCCATTGGGTTAGGCCTGT...GGTTGTCAAGGTGGGTCCCTTTGATGTGAGGTGCCATCCTCTGAGCCCAGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR CCA 90 bp AGAGGATGGCACCTCACATCAAAGGGACCCACCTTGACAACCAGACCCTTCCCTAGCCCCGAGATCCACTaGCGGTCACAGCCTCGCTGT +
Preference number: 4 (lower is better)
Translates to: RGWHLTSKGPTLTTRPFPSPEIH*RSQPRC
Trigger: ACAGCGAGGCTGTGACCGCCAGTGGATCTCGGGGCT...AGGGAAGGGTCTGGTTGTCAAGGTGGGTCCCTTTGATGTGAGGTGCCATCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR CCA 90 bp AGACCTGGGCTCAGAGGATGGCACCTCACATCAAAGGGACCCACCTTGACAACCCTGGGCAGTTCTGCCTaGTGTCTAACCGTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: RPGLRGWHLTSKGPTLTTLGSSA*CLTVGL
Trigger: GAGGCCCACGGTTAGACACCAGGCAGAACTGCCCAG...GGTTGTCAAGGTGGGTCCCTTTGATGTGAGGTGCCATCCTCTGAGCCCAGGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR CCA 90 bp AATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTCCAGGACATCCGCTTTaGCCACTGAGGCCGATTCCT +
Preference number: 4 (lower is better)
Translates to: NRKRLGLPPPSSPLNTGSPGHPL*PLRPIP
Trigger: AGGAATCGGCCTCAGTGGCCAAAGCGGATGTCCTGG...ACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CCA 90 bp CAGGGCTCCCTTCAGCTCTGCAATCCGGCGACAAAGCCACAACCACAGACGGTCACTTCACCTGTTCCCTaGCACCTGGAGTTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: QGSLQLCNPATKPQPQTVTSPVP*HLELQG
Trigger: TCCCTGCAACTCCAGGTGCCAGGGAACAGGTGAAGT...GACCGTCTGTGGTTGTGGCTTTGTCGCCGGATTGCAGAGCTGAAGGGAGCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CCA 90 bp GGAGCCGCTGCTTCTGCATCCAGAATATGGGGCAGGAACCTGCCCATCCTCCTTGAGAGACCCAACCTCTaGGAGCCGCTGCTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: GAAASASRIWGRNLPILLERPNL*EPLLLH
Trigger: ATGCAGAAGCAGCGGCTCCCAGAGGTTGGGTCTCTC...AAGGAGGATGGGCAGGTTCCTGCCCCATATTCTGGATGCAGAAGCAGCGGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CCA 90 bp TCGAGGTCTGGATTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCTGAGGTCGTAGCGTaGGACCCCGCAAAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: SRSGFPTSHNRKRLGLPPPEVVA*DPAKPG
Trigger: GCCTGGCTTTGCGGGGTCCCACGCTACGACCTCAGG...AGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAATCCAGACCTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR TCA 90 bp AGACCTGGGCTCAGAGGATGGCACCTCACATCAAAGGGACCCACCTTGACAACCCAAAGGGACCCACCTTaGCAACCAGACCCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: RPGLRGWHLTSKGPTLTTQRDPP*QPDPSL
Trigger: GAGGGAAGGGTCTGGTTGTCAAGGTGGGTCCCTTTG...GGTTGTCAAGGTGGGTCCCTTTGATGTGAGGTGCCATCCTCTGAGCCCAGGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR TCA 90 bp AGAGGATGGCACCTCACATCAAAGGGACCCACCTTGACAACCAGACCCTTCCCTCACAGATGGCTGTTCTaGAGGTCGGGGGTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: RGWHLTSKGPTLTTRPFPHRWLF*RSGVSG
Trigger: CCCAGACACCCCCGACCTTCAGAACAGCCATCTGTG...AGGGAAGGGTCTGGTTGTCAAGGTGGGTCCCTTTGATGTGAGGTGCCATCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR TCA 90 bp AAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCTTCCAAAGCTGGAAGTaGCCCTGGAGACCACTTCAC +
Preference number: 4 (lower is better)
Translates to: KRLGLPPPSSPLNTGSVSFQSWK*PWRPLH
Trigger: GTGAAGTGGTCTCCAGGGTCACTTCCAGCTTTGGAA...GGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR GCA 90 bp CTCTTTCTAATAAAATCTCACATGGACCCAACACAGGAGACAGGAGGGCTGTGCCCGTCCTGCCCGTCCTaGCCGTCAGAGCCGCAGGAG +
Preference number: 4 (lower is better)
Translates to: LFLIKSHMDPTQETGGLCPSCPS*PSEPQE
Trigger: CTCCTGCGGCTCTGACGGGCAGGACGGGCAGGACGG...GCACAGCCCTCCTGTCTCCTGTGTTGGGTCCATGTGAGATTTTATTAGAAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR GCA 90 bp TCGAGGTCTGGATTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTAGCAGCAGGAGTTCCTaGTGGGACGAGGGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: SRSGFPTSHNRKRLGLPPSSRSS*WDEGGV
Trigger: GACCCCTCCCTCGTCCCAGCAGGAACTCCTGCTGCT...AGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAATCCAGACCTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR GCA 90 bp TCGAGGTCTGGATTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTTGGGTGTGCCTGGCCTaGAGAGCTGGGCACAGATGG +
Preference number: 4 (lower is better)
Translates to: SRSGFPTSHNRKRLGLPPWVCLA*RAGHRW
Trigger: CCATCTGTGCCCAGCTCTGCAGGCCAGGCACACCCA...AGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAATCCAGACCTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR GCA 90 bp AGACCTGGGCTCAGAGGATGGCACCTCACATCAAAGGGACCCACCTTGACAACCTGGGACCATGGACACTaGCTCGCTGGCCTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: RPGLRGWHLTSKGPTLTTWDHGH*LAGLSS
Trigger: AGAGGAAAGGCCAGCGAGGCAGTGTCCATGGTCCCA...GGTTGTCAAGGTGGGTCCCTTTGATGTGAGGTGCCATCCTCTGAGCCCAGGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR GCA 90 bp GATTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCAATGGCCCTGGGGCTaGAGATGCAGGTTGTGCCTT +
Preference number: 4 (lower is better)
Translates to: DSPQAIIAKGWVCLLRAAQWPWG*RCRLCL
Trigger: AAGGCACAACCTGCATCTGCAGCCCCAGGGCCATTG...GGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR GCA 90 bp GAAACAGCCCCTTTTGTTACCTCCACCCGCAACTCTGGGCTCCCTGGATTCCAAATCCACTCCCAGGCCTaGAGGAGATGGGGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: ETAPFVTSTRNSGLPGFQIHSQA*RRWGGS
Trigger: GGAACCTCCCCATCTCCTGCAGGCCTGGGAGTGGAT...TTGGAATCCAGGGAGCCCAGAGTTGCGGGTGGAGGTAACAAAAGGGGCTGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR GCA 90 bp CACGTAGGGTCTGGAGAGGCCCCTGGTGTTTGTCATCCACAGGGCTCCCTTCAGACCTCTGGGAGCCGCTaGTTCTGCATCCAGAATATG +
Preference number: 4 (lower is better)
Translates to: HVGSGEAPGVCHPQGSLQTSGSR*FCIQNM
Trigger: CATATTCTGGATGCAGAAGCAGCGGCTCCCAGAGGT...CTGAAGGGAGCCCTGTGGATGACAAACACCAGGGGCCTCTCCAGACCCTACGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CCA 90 bp AGAGGATGGCACCTCACATCAAAGGGACCCACCTTGACAACCAGACCCTTCCCTACTGGAACATGGTCCTaGTTCCCTCCTGGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: RGWHLTSKGPTLTTRPFPTGTWS*FPPGSP
Trigger: CGGGGAGCCAGGAGGGAACCAGGACCATGTTCCAGT...AGGGAAGGGTCTGGTTGTCAAGGTGGGTCCCTTTGATGTGAGGTGCCATCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331952.6
ENST00000557649.6
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp GATTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCAGCAGGAGTTCCTGCTaGGACGAGGGAGGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: DSPQAIIAKGWVCLLRAASRSSC*DEGGVF
Trigger: AAAGACCCCTCCCTCGTCCCAGCAGGAACTCCTGCT...GGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp GAGGGGTCTTTGGGTGAGCCTGGGGAGCCTCAACTGTTAGCAGTCGAATCCTCTACCCTTCCCTCCCCGTaGGGTTTCGAGGTCTGGATT +
Preference number: 4 (lower is better)
Translates to: EGSLGEPGEPQLLAVESSTLPSP*GFEVWI
Trigger: AATCCAGACCTCGAAACCCCACGGGGAGGGAAGGGT...AGAGGATTCGACTGCTAACAGTTGAGGCTCCCCAGGCTCACCCAAAGACCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp TTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCCCTGGGCTCAGAGGATaGCACCTCACATCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: FPTSHNRKRLGLPPPSSPPGLRG*HLTSKG
Trigger: TCCCTTTGATGTGAGGTGCCATCCTCTGAGCCCAGG...GGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp GCTTTGGCCACTGAGGCCGATTCCTTAGCAAATCGGTTCTGGTTTCTCTCATTTGGCCCCGGGCTCAGCTaGGTGTGCCTGGCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: ALATEADSLANRFWFLSFGPGLS*VCLACR
Trigger: TCTGCAGGCCAGGCACACCCAGCTGAGCCCGGGGCC...AAATGAGAGAAACCAGAACCGATTTGCTAAGGAATCGGCCTCAGTGGCCAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CCA 90 bp GATTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCTCCTGGGAAAAGCCTTaGCTCCCAGCCCAACGCTCA +
Preference number: 4 (lower is better)
Translates to: DSPQAIIAKGWVCLLRAASWEKP*LPAQRS
Trigger: TGAGCGTTGGGCTGGGAGCCAAGGCTTTTCCCAGGA...GGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR CCA 90 bp CAGGGCTCCCTTCAGCTCTGCAATCCGGCGACAAAGCCACAACCACAGACGGTCTGTGCCTTCTTCCGGTaGAAGAAGACTGGGACCATG +
Preference number: 4 (lower is better)
Translates to: QGSLQLCNPATKPQPQTVCAFFR*KKTGTM
Trigger: CATGGTCCCAGTCTTCTTCCACCGGAAGAAGGCACA...GACCGTCTGTGGTTGTGGCTTTGTCGCCGGATTGCAGAGCTGAAGGGAGCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR CCA 90 bp CCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGACTGGAACATGGTCCTaGGCTCCTGCTGGTGCTGTA +
Preference number: 4 (lower is better)
Translates to: PTSHNRKRLGLPPPSSPLTGTWS*APAGAV
Trigger: TACAGCACCAGCAGGAGCCCAGGACCATGTTCCAGT...CAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR CCA 90 bp GAGGGGTCTTTGGGTGAGCCTGGGGAGCCTCAACTGTTAGCAGTCGAATCCTCTTCCCTGTGTCTCTCCTaGGCAGTTCTGCCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: EGSLGEPGEPQLLAVESSSLCLS*AVLPGV
Trigger: GACACCAGGCAGAACTGCCCAGGAGAGACACAGGGA...AGAGGATTCGACTGCTAACAGTTGAGGCTCCCCAGGCTCACCCAAAGACCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR TCA 90 bp GAGGGGTCTTTGGGTGAGCCTGGGGAGCCTCAACTGTTAGCAGTCGAATCCTCTTCATTCTTTCTGGTCTaGCGTCGTGTCTCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: EGSLGEPGEPQLLAVESSSFFLV*RRVSGR
Trigger: CCGGCCAGAGACACGACGTCAGACCAGAAAGAATGA...AGAGGATTCGACTGCTAACAGTTGAGGCTCCCCAGGCTCACCCAAAGACCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR TCA 90 bp AGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGTCATTCTTTCTGGTCTaGCGTCGTGTCTCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: SHNRKRLGLPPPSSPLNTSFFLV*RRVSGR
Trigger: CCGGCCAGAGACACGACGTCAGACCAGAAAGAATGA...CGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR TCA 90 bp CTCTTTCTAATAAAATCTCACATGGACCCAACACAGGAGACAGGAGGGCTGTGCACAGGAGGGCTGTGCTaGCTAGTGTGGCGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: LFLIKSHMDPTQETGGLCTGGLC*LVWRGR
Trigger: GCGGCCCCGCCACACTAGTCAGCACAGCCCTCCTGT...GCACAGCCCTCCTGTCTCCTGTGTTGGGTCCATGTGAGATTTTATTAGAAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR TCA 90 bp GCTTTGGCCACTGAGGCCGATTCCTTAGCAAATCGGTTCTGGTTTCTCTCATTTACAGGAGGGCTGTGCTaGCTAGTGTGGCGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: ALATEADSLANRFWFLSFTGGLC*LVWRGR
Trigger: GCGGCCCCGCCACACTAGTCAGCACAGCCCTCCTGT...AAATGAGAGAAACCAGAACCGATTTGCTAAGGAATCGGCCTCAGTGGCCAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR TCA 90 bp GATTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCGGCTCACAACCAGCTaGGAAGTTTCCATTACGGCG +
Preference number: 4 (lower is better)
Translates to: DSPQAIIAKGWVCLLRAARLTTS*EVSITA
Trigger: CGCCGTAATGGAAACTTCTCAGCTGGTTGTGAGCCG...GGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR TCA 90 bp TTCTGGAAACAGCCCCTTTTGTTACCTCCACCCGCAACTCTGGGCTCCCTGGATTCGAGGACGCTGGTCTaGTTGTCCCTGTGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: FWKQPLLLPPPATLGSLDSRTLV*LSLCLS
Trigger: GGAGAGACACAGGGACAATCAGACCAGCGTCCTCGA...ATCCAGGGAGCCCAGAGTTGCGGGTGGAGGTAACAAAAGGGGCTGTTTCCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR TCA 90 bp AATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTATCCGCTTTGGCCACTaGGGCCGATTCCTTAGCAAA +
Preference number: 4 (lower is better)
Translates to: NRKRLGLPPPSSPLNTGSIRFGH*GRFLSK
Trigger: TTTGCTAAGGAATCGGCCTCAGTGGCCAAAGCGGAT...ACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR GCA 90 bp GCTTTGGCCACTGAGGCCGATTCCTTAGCAAATCGGTTCTGGTTTCTCTCATTTGTTGTCCTCCCTCTCTaGCCTGCACACCCGCGGGCC +
Preference number: 4 (lower is better)
Translates to: ALATEADSLANRFWFLSFVVLPL*PAHPRA
Trigger: GGCCCGCGGGTGTGCAGGGCAGAGAGGGAGGACAAC...AAATGAGAGAAACCAGAACCGATTTGCTAAGGAATCGGCCTCAGTGGCCAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR GCA 90 bp CACGTAGGGTCTGGAGAGGCCCCTGGTGTTTGTCATCCACAGGGCTCCCTTCAGTGCAGATGCAGGTTGTaGCTTCTTCCGGTGGAAGAA +
Preference number: 4 (lower is better)
Translates to: HVGSGEAPGVCHPQGSLQCRCRL*LLPVEE
Trigger: TTCTTCCACCGGAAGAAGGCACAACCTGCATCTGCA...CTGAAGGGAGCCCTGTGGATGACAAACACCAGGGGCCTCTCCAGACCCTACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR GCA 90 bp CTCTTTCTAATAAAATCTCACATGGACCCAACACAGGAGACAGGAGGGCTGTGCCCCCGGCTGACTTGCTaGTCTCGGGACAGCCCGGTC +
Preference number: 4 (lower is better)
Translates to: LFLIKSHMDPTQETGGLCPRLTC*SRDSPV
Trigger: GACCGGGCTGTCCCGAGAGCAGCAAGTCAGCCGGGG...GCACAGCCCTCCTGTCTCCTGTGTTGGGTCCATGTGAGATTTTATTAGAAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR CCA 90 bp AAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCTCATTTACTGGAACATaGTCCTGGTTCCCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: KRLGLPPPSSPLNTGSVSSFTGT*SWFPPG
Trigger: GCCAGGAGGGAACCAGGACCATGTTCCAGTAAATGA...GGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331952.6
ENST00000557649.6
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp CACCTTGACAACCAGACCCTTCCCTCCCCGTGGGGTTTCGAGGTCTGGATTCCCTCATTTACTGGAACATaGTCCTGGTTCCCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: HLDNQTLPSPWGFEVWIPSFTGT*SWFPPG
Trigger: GCCAGGAGGGAACCAGGACCATGTTCCAGTAAATGA...GGGAATCCAGACCTCGAAACCCCACGGGGAGGGAAGGGTCTGGTTGTCAAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331952.6
ENST00000557649.6
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp GGCTCCCTTCAGCTCTGCAATCCGGCGACAAAGCCACAACCACAGACGGTCTCCGCAGTCCTCATTTACTaGAACATGGTCCTGGTTCCC +
Preference number: 4 (lower is better)
Translates to: GSLQLCNPATKPQPQTVSAVLIY*NMVLVP
Trigger: GGGAACCAGGACCATGTTCCAGTAAATGAGGACTGC...GGAGACCGTCTGTGGTTGTGGCTTTGTCGCCGGATTGCAGAGCTGAAGGGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CCA 90 bp CTCTTTCTAATAAAATCTCACATGGACCCAACACAGGAGACAGGAGGGCTGTGCCCGTTGCCACGGGCTTaGCCCGGCCGCAGTATAGGC +
Preference number: 4 (lower is better)
Translates to: LFLIKSHMDPTQETGGLCPLPRA*PGRSIG
Trigger: GCCTATACTGCGGCCGGGCCAAGCCCGTGGCAACGG...GCACAGCCCTCCTGTCTCCTGTGTTGGGTCCATGTGAGATTTTATTAGAAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp AGAGGATGGCACCTCACATCAAAGGGACCCACCTTGACAACCAGACCCTTCCCTTCCTGGGAAAAGCCTTaGCTCCCAGCCCAACGCTCA +
Preference number: 4 (lower is better)
Translates to: RGWHLTSKGPTLTTRPFPSWEKP*LPAQRS
Trigger: TGAGCGTTGGGCTGGGAGCCAAGGCTTTTCCCAGGA...AGGGAAGGGTCTGGTTGTCAAGGTGGGTCCCTTTGATGTGAGGTGCCATCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR CCA 90 bp TCGAGGTCTGGATTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCTGGGCAGTTCTGCCTaGTGTCTAACCGTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: SRSGFPTSHNRKRLGLPPLGSSA*CLTVGL
Trigger: GAGGCCCACGGTTAGACACCAGGCAGAACTGCCCAG...AGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAATCCAGACCTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR CCA 90 bp AGAGGATGGCACCTCACATCAAAGGGACCCACCTTGACAACCAGACCCTTCCCTTCCCTGTGTCTCTCCTaGGCAGTTCTGCCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: RGWHLTSKGPTLTTRPFPSLCLS*AVLPGV
Trigger: GACACCAGGCAGAACTGCCCAGGAGAGACACAGGGA...AGGGAAGGGTCTGGTTGTCAAGGTGGGTCCCTTTGATGTGAGGTGCCATCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR CCA 90 bp AGAGGATGGCACCTCACATCAAAGGGACCCACCTTGACAACCAGACCCTTCCCTCCAGGACATCCGCTTTaGCCACTGAGGCCGATTCCT +
Preference number: 4 (lower is better)
Translates to: RGWHLTSKGPTLTTRPFPPGHPL*PLRPIP
Trigger: AGGAATCGGCCTCAGTGGCCAAAGCGGATGTCCTGG...AGGGAAGGGTCTGGTTGTCAAGGTGGGTCCCTTTGATGTGAGGTGCCATCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CCA 90 bp AATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTTCTGCATCCAGAATATaGGGCAGGAACCTGCCCATC +
Preference number: 4 (lower is better)
Translates to: NRKRLGLPPPSSPLNTGSSASRI*GRNLPI
Trigger: GATGGGCAGGTTCCTGCCCCATATTCTGGATGCAGA...ACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR GCA 90 bp TTCTGGAAACAGCCCCTTTTGTTACCTCCACCCGCAACTCTGGGCTCCCTGGATAGGGCTCACGGCTCCTaGTGCAGTCCTCATTTACTG +
Preference number: 4 (lower is better)
Translates to: FWKQPLLLPPPATLGSLDRAHGS*CSPHLL
Trigger: CAGTAAATGAGGACTGCAGCAGGAGCCGTGAGCCCT...ATCCAGGGAGCCCAGAGTTGCGGGTGGAGGTAACAAAAGGGGCTGTTTCCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CCA 90 bp TTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCGCAGTCCTCATTTACTaGAACATGGTCCTGGTTCCC +
Preference number: 4 (lower is better)
Translates to: FPTSHNRKRLGLPPPSSPAVLIY*NMVLVP
Trigger: GGGAACCAGGACCATGTTCCAGTAAATGAGGACTGC...GGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000331952.6
ENST00000557649.6
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp TTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCCCTCCTCATTCTTTCTaGTCTGACGTCGTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: FPTSHNRKRLGLPPPSSPPPHSF*SDVVSL
Trigger: CAGAGACACGACGTCAGACCAGAAAGAATGAGGAGG...GGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp AATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTCCTCCTCATTCTTTCTaGTCTGACGTCGTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: NRKRLGLPPPSSPLNTGSPPHSF*SDVVSL
Trigger: CAGAGACACGACGTCAGACCAGAAAGAATGAGGAGG...ACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp TTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCATAATCGCAAAAGGCTaGGTTTGCCTCCTCCGAGCA +
Preference number: 4 (lower is better)
Translates to: FPTSHNRKRLGLPPPSSPIIAKG*VCLLRA
Trigger: TGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTAT...GGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp AGAGGATGGCACCTCACATCAAAGGGACCCACCTTGACAACCAGACCCTTCCCTCCTGGGCTCAGAGGATaGCACCTCACATCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: RGWHLTSKGPTLTTRPFPPGLRG*HLTSKG
Trigger: TCCCTTTGATGTGAGGTGCCATCCTCTGAGCCCAGG...AGGGAAGGGTCTGGTTGTCAAGGTGGGTCCCTTTGATGTGAGGTGCCATCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp TTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTCATTTACTGGAACATaGTCCTGGGCTCCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: FPTSHNRKRLGLPPPSSPSFTGT*SWAPAG
Trigger: ACCAGCAGGAGCCCAGGACCATGTTCCAGTAAATGA...GGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR CCA 90 bp ACCCTGGAGACCACTTCACCTGTTCCCTGGCACCTGGAGTTGCAGGGACACACCTGTCTCCCAGTTAAGTaGTGGGACAAACAGGAACCA +
Preference number: 4 (lower is better)
Translates to: TLETTSPVPWHLELQGHTCLPVK*WDKQEP
Trigger: TGGTTCCTGTTTGTCCCACCACTTAACTGGGAGACA...GGTGTGTCCCTGCAACTCCAGGTGCCAGGGAACAGGTGAAGTGGTCTCCAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CCA 90 bp CACGTAGGGTCTGGAGAGGCCCCTGGTGTTTGTCATCCACAGGGCTCCCTTCAGCTTCTGGGCCACTTCTaGAAACAGCCCCTTTTGTTA +
Preference number: 4 (lower is better)
Translates to: HVGSGEAPGVCHPQGSLQLLGHF*KQPLLL
Trigger: TAACAAAAGGGGCTGTTTCCAGAAGTGGCCCAGAAG...CTGAAGGGAGCCCTGTGGATGACAAACACCAGGGGCCTCTCCAGACCCTACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CCA 90 bp AAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCTTCTGGGCCACTTCTaGAAACAGCCCCTTTTGTTA +
Preference number: 4 (lower is better)
Translates to: KRLGLPPPSSPLNTGSVSLLGHF*KQPLLL
Trigger: TAACAAAAGGGGCTGTTTCCAGAAGTGGCCCAGAAG...GGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR TCA 90 bp CTCTTTCTAATAAAATCTCACATGGACCCAACACAGGAGACAGGAGGGCTGTGCTGGGGCACAGTCCAGTaGGGTCCTGGACCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: LFLIKSHMDPTQETGGLCWGTVQ*GPGPSW
Trigger: CCAAGAGGGTCCAGGACCTCACTGGACTGTGCCCCA...GCACAGCCCTCCTGTCTCCTGTGTTGGGTCCATGTGAGATTTTATTAGAAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331952.6
ENST00000557649.6
ENST00000619279.4
ENST00000630349.2
CDS-3UTR GCA 90 bp CTCTTTCTAATAAAATCTCACATGGACCCAACACAGGAGACAGGAGGGCTGTGCGGTGTCTGGGCCCCTTaGTGTCCCCTCGGCTTCTAC +
Preference number: 4 (lower is better)
Translates to: LFLIKSHMDPTQETGGLCGVWAP*CPLGFY
Trigger: GTAGAAGCCGAGGGGACAGCAAGGGGCCCAGACACC...GCACAGCCCTCCTGTCTCCTGTGTTGGGTCCATGTGAGATTTTATTAGAAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp AGACCTGGGCTCAGAGGATGGCACCTCACATCAAAGGGACCCACCTTGACAACCTCATTTACTGGAACATaGTCCTGGTTCCCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: RPGLRGWHLTSKGPTLTTSFTGT*SWFPPG
Trigger: GCCAGGAGGGAACCAGGACCATGTTCCAGTAAATGA...GGTTGTCAAGGTGGGTCCCTTTGATGTGAGGTGCCATCCTCTGAGCCCAGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331952.6
ENST00000557649.6
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp AGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGCAGTCCTCATTTACTaGAACATGGTCCTGGTTCCC +
Preference number: 4 (lower is better)
Translates to: SHNRKRLGLPPPSSPLNTAVLIY*NMVLVP
Trigger: GGGAACCAGGACCATGTTCCAGTAAATGAGGACTGC...CGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331952.6
ENST00000557649.6
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp GAGGGGTCTTTGGGTGAGCCTGGGGAGCCTCAACTGTTAGCAGTCGAATCCTCTCCTCCTCATTCTTTCTaGTCTGACGTCGTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: EGSLGEPGEPQLLAVESSPPHSF*SDVVSL
Trigger: CAGAGACACGACGTCAGACCAGAAAGAATGAGGAGG...AGAGGATTCGACTGCTAACAGTTGAGGCTCCCCAGGCTCACCCAAAGACCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp CTCTTTCTAATAAAATCTCACATGGACCCAACACAGGAGACAGGAGGGCTGTGCGTGCTTGAGCTCTCCTaGAAGCCCTGCCCGTCCTGC +
Preference number: 4 (lower is better)
Translates to: LFLIKSHMDPTQETGGLCVLELS*KPCPSC
Trigger: GCAGGACGGGCAGGGCTTCCAGGAGAGCTCAAGCAC...GCACAGCCCTCCTGTCTCCTGTGTTGGGTCCATGTGAGATTTTATTAGAAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp AGACCTGGGCTCAGAGGATGGCACCTCACATCAAAGGGACCCACCTTGACAACCATAATCGCAAAAGGCTaGGTTTGCCTCCTCCGAGCA +
Preference number: 4 (lower is better)
Translates to: RPGLRGWHLTSKGPTLTTIIAKG*VCLLRA
Trigger: TGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTAT...GGTTGTCAAGGTGGGTCCCTTTGATGTGAGGTGCCATCCTCTGAGCCCAGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp GATTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCATAATCGCAAAAGGCTaGGTTTGCCTCCTCCGAGCA +
Preference number: 4 (lower is better)
Translates to: DSPQAIIAKGWVCLLRAAIIAKG*VCLLRA
Trigger: TGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTAT...GGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp TCTGGGAGCCGCTGCTTCTGCATCCAGAATATGGGGCAGGAACCTGCCCATCCTTGTCTCCCAGTTAAGTaGTGGGACAAACAGGAACCA +
Preference number: 4 (lower is better)
Translates to: SGSRCFCIQNMGQEPAHPCLPVK*WDKQEP
Trigger: TGGTTCCTGTTTGTCCCACCACTTAACTGGGAGACA...AGGATGGGCAGGTTCCTGCCCCATATTCTGGATGCAGAAGCAGCGGCTCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CCA 90 bp AGAGGATGGCACCTCACATCAAAGGGACCCACCTTGACAACCAGACCCTTCCCTGCAGTCCTCATTTACTaGAACATGGTCCTGGTTCCC +
Preference number: 4 (lower is better)
Translates to: RGWHLTSKGPTLTTRPFPAVLIY*NMVLVP
Trigger: GGGAACCAGGACCATGTTCCAGTAAATGAGGACTGC...AGGGAAGGGTCTGGTTGTCAAGGTGGGTCCCTTTGATGTGAGGTGCCATCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331952.6
ENST00000557649.6
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp AGAGGATGGCACCTCACATCAAAGGGACCCACCTTGACAACCAGACCCTTCCCTATAATCGCAAAAGGCTaGGTTTGCCTCCTCCGAGCA +
Preference number: 4 (lower is better)
Translates to: RGWHLTSKGPTLTTRPFPIIAKG*VCLLRA
Trigger: TGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTAT...AGGGAAGGGTCTGGTTGTCAAGGTGGGTCCCTTTGATGTGAGGTGCCATCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp CTCTTTCTAATAAAATCTCACATGGACCCAACACAGGAGACAGGAGGGCTGTGCCCTGGCCTGCAGAGCTaGGCACAGATGGCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: LFLIKSHMDPTQETGGLCPGLQS*AQMAVL
Trigger: CAGAACAGCCATCTGTGCCCAGCTCTGCAGGCCAGG...GCACAGCCCTCCTGTCTCCTGTGTTGGGTCCATGTGAGATTTTATTAGAAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp TCGAGGTCTGGATTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTGCAGTCCTCATTTACTaGAACATGGTCCTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: SRSGFPTSHNRKRLGLPPAVLIY*NMVLGS
Trigger: GGAGCCCAGGACCATGTTCCAGTAAATGAGGACTGC...AGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAATCCAGACCTCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR CCA 90 bp TCGAGGTCTGGATTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCAACTCTGGGCTCCCTaGATTCCAAAGCTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: SRSGFPTSHNRKRLGLPPQLWAP*IPKLEV
Trigger: CACTTCCAGCTTTGGAATCCAGGGAGCCCAGAGTTG...AGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAATCCAGACCTCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CCA 90 bp CTCTTTCTAATAAAATCTCACATGGACCCAACACAGGAGACAGGAGGGCTGTGCGCGTTGCCTTTGCAGTaGACAGACAGCAGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: LFLIKSHMDPTQETGGLCALPLQ*TDSSGW
Trigger: CCAGCCGCTGCTGTCTGTCCACTGCAAAGGCAACGC...GCACAGCCCTCCTGTCTCCTGTGTTGGGTCCATGTGAGATTTTATTAGAAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR GCA 90 bp CTCTTTCTAATAAAATCTCACATGGACCCAACACAGGAGACAGGAGGGCTGTGCAGCCAGGCACGTCCTTaGGTTGCCTTTGCAGTGGAC +
Preference number: 4 (lower is better)
Translates to: LFLIKSHMDPTQETGGLCSQARP*VAFAVD
Trigger: GTCCACTGCAAAGGCAACGCAAGGACGTGCCTGGCT...GCACAGCCCTCCTGTCTCCTGTGTTGGGTCCATGTGAGATTTTATTAGAAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CCA 90 bp TCGAGGTCTGGATTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCTCCTCATTCTTTCTaGTCTGACGTCGTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: SRSGFPTSHNRKRLGLPPPPHSF*SDVVSL
Trigger: CAGAGACACGACGTCAGACCAGAAAGAATGAGGAGG...AGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAATCCAGACCTCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CCA 90 bp GCTTTGGCCACTGAGGCCGATTCCTTAGCAAATCGGTTCTGGTTTCTCTCATTTTCCCTGTGTCTCTCCTaGGCAGTTCTGCCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: ALATEADSLANRFWFLSFSLCLS*AVLPGV
Trigger: GACACCAGGCAGAACTGCCCAGGAGAGACACAGGGA...AAATGAGAGAAACCAGAACCGATTTGCTAAGGAATCGGCCTCAGTGGCCAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CCA 90 bp GCTTTGGCCACTGAGGCCGATTCCTTAGCAAATCGGTTCTGGTTTCTCTCATTTCTCCACCCGCAACTCTaGGCTCCCTGGATTCCAAAG +
Preference number: 4 (lower is better)
Translates to: ALATEADSLANRFWFLSFLHPQL*APWIPK
Trigger: CTTTGGAATCCAGGGAGCCCAGAGTTGCGGGTGGAG...AAATGAGAGAAACCAGAACCGATTTGCTAAGGAATCGGCCTCAGTGGCCAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CCA 90 bp GCTTTGGCCACTGAGGCCGATTCCTTAGCAAATCGGTTCTGGTTTCTCTCATTTCAAAGCTGGGCCAGCTaGCAGCGGCCAGGCTATAAT +
Preference number: 4 (lower is better)
Translates to: ALATEADSLANRFWFLSFQSWAS*QRPGYN
Trigger: ATTATAGCCTGGCCGCTGCCAGCTGGCCCAGCTTTG...AAATGAGAGAAACCAGAACCGATTTGCTAAGGAATCGGCCTCAGTGGCCAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630349.2
CDS-3UTR TCA 90 bp CTCTTTCTAATAAAATCTCACATGGACCCAACACAGGAGACAGGAGGGCTGTGCTCATTCTTTCTGGTCTaGCGTCGTGTCTCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: LFLIKSHMDPTQETGGLCSFFLV*RRVSGR
Trigger: CCGGCCAGAGACACGACGTCAGACCAGAAAGAATGA...GCACAGCCCTCCTGTCTCCTGTGTTGGGTCCATGTGAGATTTTATTAGAAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR TCA 90 bp TGTGTTTTAATAAAACAGTGTCTCCCAGTTAAGTGGTGGGACAAACAGGAACCACTCCGAGCAGCCCCTTaGACACGGGCAGTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: CVLIKQCLPVKWWDKQEPLRAAP*TRAVCP
Trigger: GGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAG...TGGTTCCTGTTTGTCCCACCACTTAACTGGGAGACACTGTTTTATTAAAACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CCA 90 bp CTCTTTCTAATAAAATCTCACATGGACCCAACACAGGAGACAGGAGGGCTGTGCTGTGCCTTCTTCCGGTaGAAGAAGACTGGGACCATG +
Preference number: 4 (lower is better)
Translates to: LFLIKSHMDPTQETGGLCCAFFR*KKTGTM
Trigger: CATGGTCCCAGTCTTCTTCCACCGGAAGAAGGCACA...GCACAGCCCTCCTGTCTCCTGTGTTGGGTCCATGTGAGATTTTATTAGAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR CCA 90 bp TGTGTTTTAATAAAACAGTGTCTCCCAGTTAAGTGGTGGGACAAACAGGAACCACCCCCACGTAGGGTCTaGAGAGGCCCCTGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: CVLIKQCLPVKWWDKQEPPPRRV*RGPWCL
Trigger: CAAACACCAGGGGCCTCTCCAGACCCTACGTGGGGG...TGGTTCCTGTTTGTCCCACCACTTAACTGGGAGACACTGTTTTATTAAAACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR TCA 90 bp TGTGTTTTAATAAAACAGTGTCTCCCAGTTAAGTGGTGGGACAAACAGGAACCAATCCGCTTTGGCCACTaGGGCCGATTCCTTAGCAAA +
Preference number: 4 (lower is better)
Translates to: CVLIKQCLPVKWWDKQEPIRFGH*GRFLSK
Trigger: TTTGCTAAGGAATCGGCCTCAGTGGCCAAAGCGGAT...TGGTTCCTGTTTGTCCCACCACTTAACTGGGAGACACTGTTTTATTAAAACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS TCA 90 bp CTGCCCGTCCTGCCCGTCAGAGCCGCAGGAGGCCGCGCCAGCAGGTaGGGGCCACGTGCCGCAGGTGCAGGACAAGGCCGAGGAGCCGGG +
Preference number: 5 (lower is better)
Translates to: LPVLPVRAAGGRASR*GPRAAGAGQGRGAG
Trigger: CCCGGCTCCTCGGCCTTGTCCTGCACCTGCGGCACGTGGCCCTCACCTGCTGGCGCGGCCTCCTGCGGCTCTGACGGGCAGGACGGGCAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS CCA 90 bp CGAGGAGCCGGGCCCGCAGGTCCTCCAGTGCCGTTGCCACGGGCTTaGCCCGGCCGCAGTATAGGCCCAGGGCCAGCACGAGCAGGACGC +
Preference number: 5 (lower is better)
Translates to: RGAGPAGPPVPLPRA*PGRSIGPGPARAGR
Trigger: GCGTCCTGCTCGTGCTGGCCCTGGGCCTATACTGCGGCCGGGCCAAGCCCGTGGCAACGGCACTGGAGGACCTGCGGGCCCGGCTCCTCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS TCA 90 bp GCAGCAGGGCCAGGGCTCAGGCTGTCTCGGAGCCCCCGGAGTGCTTaGGCTCTCCTGGAAGCCCTGCCCGTCCTGCCCGTCCTGCCCGTC +
Preference number: 5 (lower is better)
Translates to: AAGPGLRLSRSPRSA*ALLEALPVLPVLPV
Trigger: GACGGGCAGGACGGGCAGGACGGGCAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGAGACAGCCTGAGCCCTGGCCCTGCTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS GCA 90 bp CAGTATAGGCCCAGGGCCAGCACGAGCAGGACGCACACACACAGCTaGAGGAGCAGGGAGCCGCCGTGTGGCCTGGGCCGGCCGGGCACC +
Preference number: 5 (lower is better)
Translates to: QYRPRASTSRTHTHS*RSREPPCGLGRPGT
Trigger: GGTGCCCGGCCGGCCCAGGCCACACGGCGGCTCCCTGCTCCTGCAGCTGTGTGTGTGCGTCCTGCTCGTGCTGGCCCTGGGCCTATACTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS CCA 90 bp CAGGGCTCAGGCTGTCTCGGAGCCCCCGGAGTGCTTGAGCTCTCCTaGAAGCCCTGCCCGTCCTGCCCGTCCTGCCCGTCAGAGCCGCAG +
Preference number: 5 (lower is better)
Translates to: QGSGCLGAPGVLELS*KPCPSCPSCPSEPQ
Trigger: CTGCGGCTCTGACGGGCAGGACGGGCAGGACGGGCAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGAGACAGCCTGAGCCCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS CCA 90 bp CTGAGGGCCCCGGCTGACTTGCTGCTCTCGGGACAGCCCGGTCCATaGGGAGGCCGTCAACCACGGGCTTGGTGGCCCCAGGAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: LRAPADLLLSGQPGP*GGRQPRAWWPQEEL
Trigger: CAGCTCCTCCTGGGGCCACCAAGCCCGTGGTTGACGGCCTCCCCATGGACCGGGCTGTCCCGAGAGCAGCAAGTCAGCCGGGGCCCTCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR CAA 90 bp GCTGTCTCGGAGCCCCCGGAGTGCTTGAGCTCTCCTGGAAGCCCTGCCCGTCCTGGTCCTCCAGTGCCGTaGCCACGGGCTTGGCCCGGC +
Preference number: 5 (lower is better)
Translates to: AVSEPPECLSSPGSPARPGPPVP*PRAWPG
Trigger: GCCGGGCCAAGCCCGTGGCAACGGCACTGGAGGACC...AGGACGGGCAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGAGACAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR CAA 90 bp ACGGTGATGGCCGGGCCAGGCCCTAGCAGCAGCAGGAGTTCCTGCTGGGACGAGGCCGTTGCCACGGGCTaGGCCCGGCCGCAGTATAGG +
Preference number: 5 (lower is better)
Translates to: TVMAGPGPSSSRSSCWDEAVATG*ARPQYR
Trigger: CCTATACTGCGGCCGGGCCAAGCCCGTGGCAACGGC...CTCGTCCCAGCAGGAACTCCTGCTGCTGCTAGGGCCTGGCCCGGCCATCACCGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CAA 90 bp CCAGGCCCTAGCAGCAGCAGGAGTTCCTGCTGGGACGAGGGAGGGGTCTTTGGGGGTCCTCCAGTGCCGTaGCCACGGGCTTGGCCCGGC +
Preference number: 5 (lower is better)
Translates to: PGPSSSRSSCWDEGGVFGGPPVP*PRAWPG
Trigger: GCCGGGCCAAGCCCGTGGCAACGGCACTGGAGGACC...CCCAAAGACCCCTCCCTCGTCCCAGCAGGAACTCCTGCTGCTGCTAGGGCCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS CCA 90 bp CTGCCCTGCACACCCGCGGGCCCCACGCGGCCTCCTCATTCTTTCTaGTCTGACGTCGTGTCTCTGGCCGGGAGTCAGGGCTCACGGCTC +
Preference number: 5 (lower is better)
Translates to: LPCTPAGPTRPPHSF*SDVVSLAGSQGSRL
Trigger: GAGCCGTGAGCCCTGACTCCCGGCCAGAGACACGACGTCAGACCAGAAAGAATGAGGAGGCCGCGTGGGGCCCGCGGGTGTGCAGGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CAA 90 bp GCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCTCAAGAGGGCCGTTGCCACGGGCTaGGCCCGGCCGCAGTATAGG +
Preference number: 5 (lower is better)
Translates to: ASSEQPLEHGQCVPLLKRAVATG*ARPQYR
Trigger: CCTATACTGCGGCCGGGCCAAGCCCGTGGCAACGGC...CCTCTTGAGGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CAA 90 bp CTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCGCCGTTGCCACGGGCTaGGCCCGGCCGCAGTATAGG +
Preference number: 5 (lower is better)
Translates to: LGLPPPSSPLNTGSVSPSAVATG*ARPQYR
Trigger: CCTATACTGCGGCCGGGCCAAGCCCGTGGCAACGGC...GGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CAA 90 bp ACGGTGATGGCCGGGCCAGGCCCTAGCAGCAGCAGGAGTTCCTGCTGGGACGAGCCGTCAACCACGGGCTaGGTGGCCCCAGGAGGAGCT +
Preference number: 5 (lower is better)
Translates to: TVMAGPGPSSSRSSCWDEPSTTG*VAPGGA
Trigger: AGCTCCTCCTGGGGCCACCAAGCCCGTGGTTGACGG...CTCGTCCCAGCAGGAACTCCTGCTGCTGCTAGGGCCTGGCCCGGCCATCACCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS TCA 90 bp CTGGACCCTCTTGGCCGGCAGCACCCCTCCCAGGCCCTTGAGAGTTaGGCCTCGGGCAGAACTGCAGGGCACACAGGTGAACGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: LDPLGRQHPSQALES*ASGRTAGHTGERAR
Trigger: CCTGGCCCGTTCACCTGTGTGCCCTGCAGTTCTGCCCGAGGCTCAACTCTCAAGGGCCTGGGAGGGGTGCTGCCGGCCAAGAGGGTCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331952.6
ENST00000557649.6
ENST00000619279.4
ENST00000630349.2
CDS TCA 90 bp CTGCACACCCGCGGGCCCCACGCGGCCTCCTCATTCTTTCTGGTCTaGCGTCGTGTCTCTGGCCGGGAGTCAGGGCTCACGGCTCCTGCT +
Preference number: 5 (lower is better)
Translates to: LHTRGPHAASSFFLV*RRVSGRESGLTAPA
Trigger: AGCAGGAGCCGTGAGCCCTGACTCCCGGCCAGAGACACGACGTCAGACCAGAAAGAATGAGGAGGCCGCGTGGGGCCCGCGGGTGTGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS CCA 90 bp CTGATCTGGAGGCGCCACCGCCCGCTGGCAGGGCCGGGTCTGTTGTaGCCTTCGTCCCGTCTCCAGCCCTCTCTGCTGGATCGCAAAGCT +
Preference number: 5 (lower is better)
Translates to: LIWRRHRPLAGPGLL*PSSRLQPSLLDRKA
Trigger: AGCTTTGCGATCCAGCAGAGAGGGCTGGAGACGGGACGAAGGCCACAACAGACCCGGCCCTGCCAGCGGGCGGTGGCGCCTCCAGATCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630349.2
CDS-3UTR CAA 90 bp GAGTTCCTGCTGGGACGAGGGAGGGGTCTTTGGGTGAGCCTGGGGAGCCTCAACGCCGTTGCCACGGGCTaGGCCCGGCCGCAGTATAGG +
Preference number: 5 (lower is better)
Translates to: EFLLGRGRGLWVSLGSLNAVATG*ARPQYR
Trigger: CCTATACTGCGGCCGGGCCAAGCCCGTGGCAACGGC...GTTGAGGCTCCCCAGGCTCACCCAAAGACCCCTCCCTCGTCCCAGCAGGAACTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CAA 90 bp GGCTCAGGCTGTCTCGGAGCCCCCGGAGTGCTTGAGCTCTCCTGGAAGCCCTGCGAGCCCCCGGAGTGCTaGAGCTCTCCTGGAAGCCCT +
Preference number: 5 (lower is better)
Translates to: GSGCLGAPGVLELSWKPCEPPEC*SSPGSP
Trigger: AGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTC...GCAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGAGACAGCCTGAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR CAA 90 bp GGACAAACAGGAACCACCGGGTGGATGGTCGGCCGTGCCCACCCGCCTCAGGCTACGAGGGAGGGGTCTTaGGGTGAGCCTGGGGAGCCT +
Preference number: 5 (lower is better)
Translates to: GQTGTTGWMVGRAHPPQATREGS*GEPGEP
Trigger: AGGCTCCCCAGGCTCACCCAAAGACCCCTCCCTCGT...AGCCTGAGGCGGGTGGGCACGGCCGACCATCCACCCGGTGGTTCCTGTTTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR CAA 90 bp GCTGTCTCGGAGCCCCCGGAGTGCTTGAGCTCTCCTGGAAGCCCTGCCCGTCCTCCTCCGAGCAGCCCCTaGAACACGGGCAGTGTGTCC +
Preference number: 5 (lower is better)
Translates to: AVSEPPECLSSPGSPARPPPSSP*NTGSVS
Trigger: GGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGG...AGGACGGGCAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGAGACAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR CAA 90 bp GTGGGACAAACAGGAACCACCGGGTGGATGGTCGGCCGTGCCCACCCGCCTCAGCCTCCGAGCAGCCCCTaGAACACGGGCAGTGTGTCC +
Preference number: 5 (lower is better)
Translates to: VGQTGTTGWMVGRAHPPQPPSSP*NTGSVS
Trigger: GGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGG...CTGAGGCGGGTGGGCACGGCCGACCATCCACCCGGTGGTTCCTGTTTGTCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR CAA 90 bp CTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCACCCCTCCCAGGCCCTaGAGAGTTGAGCCTCGGGCA +
Preference number: 5 (lower is better)
Translates to: LGLPPPSSPLNTGSVSPSTPPRP*RVEPRA
Trigger: TGCCCGAGGCTCAACTCTCAAGGGCCTGGGAGGGGT...GGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000331952.6
ENST00000557649.6
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CAA 90 bp CCAGGCCCTAGCAGCAGCAGGAGTTCCTGCTGGGACGAGGGAGGGGTCTTTGGGGAGCCCCCGGAGTGCTaGAGCTCTCCTGGAAGCCCT +
Preference number: 5 (lower is better)
Translates to: PGPSSSRSSCWDEGGVFGEPPEC*SSPGSP
Trigger: AGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTC...CCCAAAGACCCCTCCCTCGTCCCAGCAGGAACTCCTGCTGCTGCTAGGGCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CAA 90 bp GCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCTCAAGAGGACGAGGGAGGGGTCTTaGGGTGAGCCTGGGGAGCCT +
Preference number: 5 (lower is better)
Translates to: ASSEQPLEHGQCVPLLKRTREGS*GEPGEP
Trigger: AGGCTCCCCAGGCTCACCCAAAGACCCCTCCCTCGT...CCTCTTGAGGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CAA 90 bp CCAGGCCCTAGCAGCAGCAGGAGTTCCTGCTGGGACGAGGGAGGGGTCTTTGGGCGCAAAAGGCTGGGTTaGCCTCCTCCGAGCAGCCCC +
Preference number: 5 (lower is better)
Translates to: PGPSSSRSSCWDEGGVFGRKRLG*PPPSSP
Trigger: GGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCG...CCCAAAGACCCCTCCCTCGTCCCAGCAGGAACTCCTGCTGCTGCTAGGGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CAA 90 bp ACGGTGATGGCCGGGCCAGGCCCTAGCAGCAGCAGGAGTTCCTGCTGGGACGAGCCCAGGACATCCGCTTaGGCCACTGAGGCCGATTCC +
Preference number: 5 (lower is better)
Translates to: TVMAGPGPSSSRSSCWDEPRTSA*ATEADS
Trigger: GGAATCGGCCTCAGTGGCCAAAGCGGATGTCCTGGG...CTCGTCCCAGCAGGAACTCCTGCTGCTGCTAGGGCCTGGCCCGGCCATCACCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CAA 90 bp CCAGGCCCTAGCAGCAGCAGGAGTTCCTGCTGGGACGAGGGAGGGGTCTTTGGGTCAAGACCCAGGGGCTaGGTCAGCCCCTGCCCGAGT +
Preference number: 5 (lower is better)
Translates to: PGPSSSRSSCWDEGGVFGSRPRG*VSPCPS
Trigger: ACTCGGGCAGGGGCTGACCAAGCCCCTGGGTCTTGA...CCCAAAGACCCCTCCCTCGTCCCAGCAGGAACTCCTGCTGCTGCTAGGGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CAA 90 bp GCTCAGGCTGTCTCGGAGCCCCCGGAGTGCTTGAGCTCTCCTGGAAGCCCTGCCCCCTGGCACCTGGAGTaGCAGGGACACACCCTGACT +
Preference number: 5 (lower is better)
Translates to: AQAVSEPPECLSSPGSPAPWHLE*QGHTLT
Trigger: AGTCAGGGTGTGTCCCTGCAACTCCAGGTGCCAGGG...GGCAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGAGACAGCCTGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CAA 90 bp TCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCTCAAGAGGGTGACCCCTCCCAGGCCCTaGAGAGTTGAGCCTCGGGCA +
Preference number: 5 (lower is better)
Translates to: SSEQPLEHGQCVPLLKRVTPPRP*RVEPRA
Trigger: TGCCCGAGGCTCAACTCTCAAGGGCCTGGGAGGGGT...CACCCTCTTGAGGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000331952.6
ENST00000557649.6
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CAA 90 bp CAGGGCTCCCTTCAGCTCTGCAATCCGGCGACAAAGCCACAACCACAGACGGTCGCCGTTGCCACGGGCTaGGCCCGGCCGCAGTATAGG +
Preference number: 5 (lower is better)
Translates to: QGSLQLCNPATKPQPQTVAVATG*ARPQYR
Trigger: CCTATACTGCGGCCGGGCCAAGCCCGTGGCAACGGC...GACCGTCTGTGGTTGTGGCTTTGTCGCCGGATTGCAGAGCTGAAGGGAGCCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR CAA 90 bp TTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCGGTCCTCCAGTGCCGTaGCCACGGGCTTGGCCCGGC +
Preference number: 5 (lower is better)
Translates to: FPTSHNRKRLGLPPPSSPGPPVP*PRAWPG
Trigger: GCCGGGCCAAGCCCGTGGCAACGGCACTGGAGGACC...GGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CAA 90 bp AATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGGTCCTCCAGTGCCGTaGCCACGGGCTTGGCCCGGC +
Preference number: 5 (lower is better)
Translates to: NRKRLGLPPPSSPLNTGSGPPVP*PRAWPG
Trigger: GCCGGGCCAAGCCCGTGGCAACGGCACTGGAGGACC...ACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CAA 90 bp GAGTTCCTGCTGGGACGAGGGAGGGGTCTTTGGGTGAGCCTGGGGAGCCTCAACACGAGGGAGGGGTCTTaGGGTGAGCCTGGGGAGCCT +
Preference number: 5 (lower is better)
Translates to: EFLLGRGRGLWVSLGSLNTREGS*GEPGEP
Trigger: AGGCTCCCCAGGCTCACCCAAAGACCCCTCCCTCGT...GTTGAGGCTCCCCAGGCTCACCCAAAGACCCCTCCCTCGTCCCAGCAGGAACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CAA 90 bp TCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCTCAAGAGGGTGCACACGAGGGAGGGGTCTTaGGGTGAGCCTGGGGAGCCT +
Preference number: 5 (lower is better)
Translates to: SEQPLEHGQCVPLLKRVHTREGS*GEPGEP
Trigger: AGGCTCCCCAGGCTCACCCAAAGACCCCTCCCTCGT...GTGCACCCTCTTGAGGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CAA 90 bp TCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCTCAAGAGGGTGCGCAAAAGGCTGGGTTaGCCTCCTCCGAGCAGCCCC +
Preference number: 5 (lower is better)
Translates to: SSEQPLEHGQCVPLLKRVRKRLG*PPPSSP
Trigger: GGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCG...CACCCTCTTGAGGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CAA 90 bp GAGTTCCTGCTGGGACGAGGGAGGGGTCTTTGGGTGAGCCTGGGGAGCCTCAACGGGTGTCTGGGCCCCTaGCTGTCCCCTCGGCTTCTA +
Preference number: 5 (lower is better)
Translates to: EFLLGRGRGLWVSLGSLNGCLGP*LSPRLL
Trigger: TAGAAGCCGAGGGGACAGCAAGGGGCCCAGACACCC...GTTGAGGCTCCCCAGGCTCACCCAAAGACCCCTCCCTCGTCCCAGCAGGAACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CAA 90 bp TCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCTCAAGAGGGTGGGGTGTCTGGGCCCCTaGCTGTCCCCTCGGCTTCTA +
Preference number: 5 (lower is better)
Translates to: SSEQPLEHGQCVPLLKRVGCLGP*LSPRLL
Trigger: TAGAAGCCGAGGGGACAGCAAGGGGCCCAGACACCC...CACCCTCTTGAGGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CAA 90 bp GTGGGACAAACAGGAACCACCGGGTGGATGGTCGGCCGTGCCCACCCGCCTCAGAGAGGCCCCTGGTGTTaGTCATCCACAGGGCTCCCT +
Preference number: 5 (lower is better)
Translates to: VGQTGTTGWMVGRAHPPQRGPWC*SSTGLP
Trigger: AGGGAGCCCTGTGGATGACAAACACCAGGGGCCTCT...CTGAGGCGGGTGGGCACGGCCGACCATCCACCCGGTGGTTCCTGTTTGTCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS TCA 90 bp AGAAGTTTCCATTACGGCGACACTGAGCAGTGGCCTCAGCGGCCCTaGGGGCCCCGGCTGACTTGCTGCTCTCGGGACAGCCCGGTCCAT +
Preference number: 5 (lower is better)
Translates to: RSFHYGDTEQWPQRP*GPRLTCCSRDSPVH
Trigger: ATGGACCGGGCTGTCCCGAGAGCAGCAAGTCAGCCGGGGCCCTCAGGGCCGCTGAGGCCACTGCTCAGTGTCGCCGTAATGGAAACTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR CAA 90 bp GAGGGGTCTTTGGGTGAGCCTGGGGAGCCTCAACTGTTAGCAGTCGAATCCTCTGCCGTTGCCACGGGCTaGGCCCGGCCGCAGTATAGG +
Preference number: 5 (lower is better)
Translates to: EGSLGEPGEPQLLAVESSAVATG*ARPQYR
Trigger: CCTATACTGCGGCCGGGCCAAGCCCGTGGCAACGGC...AGAGGATTCGACTGCTAACAGTTGAGGCTCCCCAGGCTCACCCAAAGACCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CAA 90 bp AAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCGAGCCCCCGGAGTGCTaGAGCTCTCCTGGAAGCCCT +
Preference number: 5 (lower is better)
Translates to: KRLGLPPPSSPLNTGSVSEPPEC*SSPGSP
Trigger: AGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTC...GGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CAA 90 bp CAGGGCTCCCTTCAGCTCTGCAATCCGGCGACAAAGCCACAACCACAGACGGTCGAGCCCCCGGAGTGCTaGAGCTCTCCTGGAAGCCCT +
Preference number: 5 (lower is better)
Translates to: QGSLQLCNPATKPQPQTVEPPEC*SSPGSP
Trigger: AGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTC...GACCGTCTGTGGTTGTGGCTTTGTCGCCGGATTGCAGAGCTGAAGGGAGCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR CAA 90 bp GCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCTCAAGAGGAGGCAGCAGCCCCTTTaGGCCCCCATGATTCACCAA +
Preference number: 5 (lower is better)
Translates to: ASSEQPLEHGQCVPLLKRRQQPL*APMIHQ
Trigger: TTGGTGAATCATGGGGGCCAAAAGGGGCTGCTGCCT...CCTCTTGAGGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CAA 90 bp CCAGGCCCTAGCAGCAGCAGGAGTTCCTGCTGGGACGAGGGAGGGGTCTTTGGGAGGCAGCAGCCCCTTTaGGCCCCCATGATTCACCAA +
Preference number: 5 (lower is better)
Translates to: PGPSSSRSSCWDEGGVFGRQQPL*APMIHQ
Trigger: TTGGTGAATCATGGGGGCCAAAAGGGGCTGCTGCCT...CCCAAAGACCCCTCCCTCGTCCCAGCAGGAACTCCTGCTGCTGCTAGGGCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CAA 90 bp ACCCTGGAGACCACTTCACCTGTTCCCTGGCACCTGGAGTTGCAGGGACACACCCCTCCGAGCAGCCCCTaGAACACGGGCAGTGTGTCC +
Preference number: 5 (lower is better)
Translates to: TLETTSPVPWHLELQGHTPPSSP*NTGSVS
Trigger: GGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGG...GGTGTGTCCCTGCAACTCCAGGTGCCAGGGAACAGGTGAAGTGGTCTCCAGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CAA 90 bp CACGTAGGGTCTGGAGAGGCCCCTGGTGTTTGTCATCCACAGGGCTCCCTTCAGGGGTGTCTGGGCCCCTaGCTGTCCCCTCGGCTTCTA +
Preference number: 5 (lower is better)
Translates to: HVGSGEAPGVCHPQGSLQGCLGP*LSPRLL
Trigger: TAGAAGCCGAGGGGACAGCAAGGGGCCCAGACACCC...CTGAAGGGAGCCCTGTGGATGACAAACACCAGGGGCCTCTCCAGACCCTACGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR CAA 90 bp CACCTTGACAACCAGACCCTTCCCTCCCCGTGGGGTTTCGAGGTCTGGATTCCCGGGTGTCTGGGCCCCTaGCTGTCCCCTCGGCTTCTA +
Preference number: 5 (lower is better)
Translates to: HLDNQTLPSPWGFEVWIPGCLGP*LSPRLL
Trigger: TAGAAGCCGAGGGGACAGCAAGGGGCCCAGACACCC...GGGAATCCAGACCTCGAAACCCCACGGGGAGGGAAGGGTCTGGTTGTCAAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CAA 90 bp GATTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCAGGGCCCCGGCTGACTaGCTGCTCTCGGGACAGCCC +
Preference number: 5 (lower is better)
Translates to: DSPQAIIAKGWVCLLRAARAPAD*LLSGQP
Trigger: GGGCTGTCCCGAGAGCAGCAAGTCAGCCGGGGCCCT...GGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR CAA 90 bp AGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGAGGGCCCCGGCTGACTaGCTGCTCTCGGGACAGCCC +
Preference number: 5 (lower is better)
Translates to: SHNRKRLGLPPPSSPLNTRAPAD*LLSGQP
Trigger: GGGCTGTCCCGAGAGCAGCAAGTCAGCCGGGGCCCT...CGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR CAA 90 bp CTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCGTCCTTGCGTTGCCTTaGCAGTGGACAGACAGCAGC +
Preference number: 5 (lower is better)
Translates to: LGLPPPSSPLNTGSVSPSVLALP*QWTDSS
Trigger: GCTGCTGTCTGTCCACTGCAAAGGCAACGCAAGGAC...GGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS TCA 90 bp TGTTGCGGCTCACAACCAGCTGAGAAGTTTCCATTACGGCGACACTaGGCAGTGGCCTCAGCGGCCCTGAGGGCCCCGGCTGACTTGCTG +
Preference number: 5 (lower is better)
Translates to: CCGSQPAEKFPLRRH*AVASAALRAPADLL
Trigger: CAGCAAGTCAGCCGGGGCCCTCAGGGCCGCTGAGGCCACTGCTCAGTGTCGCCGTAATGGAAACTTCTCAGCTGGTTGTGAGCCGCAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS GCA 90 bp CTGACGTCGTGTCTCTGGCCGGGAGTCAGGGCTCACGGCTCCTGCTaGAGTCCTCATTTACTGGAACATGGTCCTGGGCTCCTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: LTSCLWPGVRAHGSC*SPHLLEHGPGLLLV
Trigger: CACCAGCAGGAGCCCAGGACCATGTTCCAGTAAATGAGGACTGCAGCAGGAGCCGTGAGCCCTGACTCCCGGCCAGAGACACGACGTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS GCA 90 bp GGTCTGACGTCGTGTCTCTGGCCGGGAGTCAGGGCTCACGGCTCCTaGTGCAGTCCTCATTTACTGGAACATGGTCCTGGGCTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: GLTSCLWPGVRAHGS*CSPHLLEHGPGLLL
Trigger: CAGCAGGAGCCCAGGACCATGTTCCAGTAAATGAGGACTGCAGCAGGAGCCGTGAGCCCTGACTCCCGGCCAGAGACACGACGTCAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS CCA 90 bp TGGGGCTGCAGATGCAGGTTGTGCCTTCTTCCGGTGGAAGAAGACTaGGACCATGGACACTGCCTCGCTGGCCTTTCCTCTGCAGGGCGG +
Preference number: 5 (lower is better)
Translates to: WGCRCRLCLLPVEED*DHGHCLAGLSSAGR
Trigger: CCGCCCTGCAGAGGAAAGGCCAGCGAGGCAGTGTCCATGGTCCCAGTCTTCTTCCACCGGAAGAAGGCACAACCTGCATCTGCAGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR CAA 90 bp AATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTACCCCTCCCAGGCCCTaGAGAGTTGAGCCTCGGGCA +
Preference number: 5 (lower is better)
Translates to: NRKRLGLPPPSSPLNTGSTPPRP*RVEPRA
Trigger: TGCCCGAGGCTCAACTCTCAAGGGCCTGGGAGGGGT...ACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000331952.6
ENST00000557649.6
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CAA 90 bp AGAGGATGGCACCTCACATCAAAGGGACCCACCTTGACAACCAGACCCTTCCCTGAGGTCCTCTGGGGCTaGGCCTCTGGGCGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: RGWHLTSKGPTLTTRPFPEVLWG*ASGRWC
Trigger: GCACCACCGCCCAGAGGCCAAGCCCCAGAGGACCTC...AGGGAAGGGTCTGGTTGTCAAGGTGGGTCCCTTTGATGTGAGGTGCCATCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CAA 90 bp TCGAGGTCTGGATTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTGGTCCTCCAGTGCCGTaGCCACGGGCTTGGCCCGGC +
Preference number: 5 (lower is better)
Translates to: SRSGFPTSHNRKRLGLPPGPPVP*PRAWPG
Trigger: GCCGGGCCAAGCCCGTGGCAACGGCACTGGAGGACC...AGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAATCCAGACCTCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CAA 90 bp TTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCCCTCCGAGCAGCCCCTaGAACACGGGCAGTGTGTCC +
Preference number: 5 (lower is better)
Translates to: FPTSHNRKRLGLPPPSSPPPSSP*NTGSVS
Trigger: GGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGG...GGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CAA 90 bp CCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGCCTCCGAGCAGCCCCTaGAACACGGGCAGTGTGTCC +
Preference number: 5 (lower is better)
Translates to: PTSHNRKRLGLPPPSSPLPPSSP*NTGSVS
Trigger: GGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGG...CAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CAA 90 bp CCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGCGCAAAAGGCTGGGTTaGCCTCCTCCGAGCAGCCCC +
Preference number: 5 (lower is better)
Translates to: PTSHNRKRLGLPPPSSPLRKRLG*PPPSSP
Trigger: GGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCG...CAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CAA 90 bp AATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTCGCAAAAGGCTGGGTTaGCCTCCTCCGAGCAGCCCC +
Preference number: 5 (lower is better)
Translates to: NRKRLGLPPPSSPLNTGSRKRLG*PPPSSP
Trigger: GGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCG...ACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CAA 90 bp GCTGTCTCGGAGCCCCCGGAGTGCTTGAGCTCTCCTGGAAGCCCTGCCCGTCCTCAGCACCTTAGTAGTTaGGCCACAGGCCTAACCCAA +
Preference number: 5 (lower is better)
Translates to: AVSEPPECLSSPGSPARPQHLSS*ATGLTQ
Trigger: TTGGGTTAGGCCTGTGGCCAAACTACTAAGGTGCTG...AGGACGGGCAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGAGACAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR CAA 90 bp AGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGCCGTCAACCACGGGCTaGGTGGCCCCAGGAGGAGCT +
Preference number: 5 (lower is better)
Translates to: SHNRKRLGLPPPSSPLNTPSTTG*VAPGGA
Trigger: AGCTCCTCCTGGGGCCACCAAGCCCGTGGTTGACGG...CGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR CAA 90 bp ACCCTGGAGACCACTTCACCTGTTCCCTGGCACCTGGAGTTGCAGGGACACACCCCCAGGACATCCGCTTaGGCCACTGAGGCCGATTCC +
Preference number: 5 (lower is better)
Translates to: TLETTSPVPWHLELQGHTPRTSA*ATEADS
Trigger: GGAATCGGCCTCAGTGGCCAAAGCGGATGTCCTGGG...GGTGTGTCCCTGCAACTCCAGGTGCCAGGGAACAGGTGAAGTGGTCTCCAGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CAA 90 bp GAGTTCCTGCTGGGACGAGGGAGGGGTCTTTGGGTGAGCCTGGGGAGCCTCAACAGGCACGTCCTTGCGTaGCCTTTGCAGTGGACAGAC +
Preference number: 5 (lower is better)
Translates to: EFLLGRGRGLWVSLGSLNRHVLA*PLQWTD
Trigger: GTCTGTCCACTGCAAAGGCAACGCAAGGACGTGCCT...GTTGAGGCTCCCCAGGCTCACCCAAAGACCCCTCCCTCGTCCCAGCAGGAACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CAA 90 bp GAGGGGTCTTTGGGTGAGCCTGGGGAGCCTCAACTGTTAGCAGTCGAATCCTCTGCAGGGCCGGGTCTGTaGTGGCCTTCGTCCCGTCTC +
Preference number: 5 (lower is better)
Translates to: EGSLGEPGEPQLLAVESSAGPGL*WPSSRL
Trigger: GAGACGGGACGAAGGCCACAACAGACCCGGCCCTGC...AGAGGATTCGACTGCTAACAGTTGAGGCTCCCCAGGCTCACCCAAAGACCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630349.2
CDS GCA 90 bp CTGACGTCGTGTCTCTGGCCGGGAGTCAGGGCTCACGGCTCCTGCTaGAGTCCTCATTTACTGGAACATGGTCCTGGTTCCCTCCTGGCT +
Preference number: 5 (lower is better)
Translates to: LTSCLWPGVRAHGSC*SPHLLEHGPGSLLA
Trigger: AGCCAGGAGGGAACCAGGACCATGTTCCAGTAAATGAGGACTGCAGCAGGAGCCGTGAGCCCTGACTCCCGGCCAGAGACACGACGTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331952.6
ENST00000557649.6
ENST00000619279.4
ENST00000630349.2
CDS GCA 90 bp GGTCTGACGTCGTGTCTCTGGCCGGGAGTCAGGGCTCACGGCTCCTaGTGCAGTCCTCATTTACTGGAACATGGTCCTGGTTCCCTCCTG +
Preference number: 5 (lower is better)
Translates to: GLTSCLWPGVRAHGS*CSPHLLEHGPGSLL
Trigger: CAGGAGGGAACCAGGACCATGTTCCAGTAAATGAGGACTGCAGCAGGAGCCGTGAGCCCTGACTCCCGGCCAGAGACACGACGTCAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331952.6
ENST00000557649.6
ENST00000619279.4
ENST00000630349.2
CDS GCA 90 bp AGGTTGTGCCTTCTTCCGGTGGAAGAAGACTGGGACCATGGACACTaGCTCGCTGGCCTTTCCTCTGCAGGGCGGAGGCAGAACACAGCC +
Preference number: 5 (lower is better)
Translates to: RLCLLPVEEDWDHGH*LAGLSSAGRRQNTA
Trigger: GGCTGTGTTCTGCCTCCGCCCTGCAGAGGAAAGGCCAGCGAGGCAGTGTCCATGGTCCCAGTCTTCTTCCACCGGAAGAAGGCACAACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS GCA 90 bp GCCACAGGCCTAACCCAATGGCCCTGGGGCTGCAGATGCAGGTTGTaGCTTCTTCCGGTGGAAGAAGACTGGGACCATGGACACTGCCTC +
Preference number: 5 (lower is better)
Translates to: ATGLTQWPWGCRCRL*LLPVEEDWDHGHCL
Trigger: GAGGCAGTGTCCATGGTCCCAGTCTTCTTCCACCGGAAGAAGGCACAACCTGCATCTGCAGCCCCAGGGCCATTGGGTTAGGCCTGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS CCA 90 bp CCCAATGGCCCTGGGGCTGCAGATGCAGGTTGTGCCTTCTTCCGGTaGAAGAAGACTGGGACCATGGACACTGCCTCGCTGGCCTTTCCT +
Preference number: 5 (lower is better)
Translates to: PNGPGAADAGCAFFR*KKTGTMDTASLAFP
Trigger: AGGAAAGGCCAGCGAGGCAGTGTCCATGGTCCCAGTCTTCTTCCACCGGAAGAAGGCACAACCTGCATCTGCAGCCCCAGGGCCATTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR CAA 90 bp AGACCTGGGCTCAGAGGATGGCACCTCACATCAAAGGGACCCACCTTGACAACCCGCAAAAGGCTGGGTTaGCCTCCTCCGAGCAGCCCC +
Preference number: 5 (lower is better)
Translates to: RPGLRGWHLTSKGPTLTTRKRLG*PPPSSP
Trigger: GGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCG...GGTTGTCAAGGTGGGTCCCTTTGATGTGAGGTGCCATCCTCTGAGCCCAGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CAA 90 bp AGACCTGGGCTCAGAGGATGGCACCTCACATCAAAGGGACCCACCTTGACAACCTCAAGACCCAGGGGCTaGGTCAGCCCCTGCCCGAGT +
Preference number: 5 (lower is better)
Translates to: RPGLRGWHLTSKGPTLTTSRPRG*VSPCPS
Trigger: ACTCGGGCAGGGGCTGACCAAGCCCCTGGGTCTTGA...GGTTGTCAAGGTGGGTCCCTTTGATGTGAGGTGCCATCCTCTGAGCCCAGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CAA 90 bp GCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCCCCTCCTCAAGAGGTGGAAACAGCCCCTTTaGTTACCTCCACCCGCAACT +
Preference number: 5 (lower is better)
Translates to: ASSEQPLEHGQCVPLLKRWKQPL*LPPPAT
Trigger: AGTTGCGGGTGGAGGTAACAAAAGGGGCTGTTTCCA...CCTCTTGAGGAGGGGGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS TCA 90 bp GCTGTCGCAGGGTGTGAACCAGAGCTGTTGCGGCTCACAACCAGCTaGGAAGTTTCCATTACGGCGACACTGAGCAGTGGCCTCAGCGGC +
Preference number: 5 (lower is better)
Translates to: AVAGCEPELLRLTTS*EVSITATLSSGLSG
Trigger: GCCGCTGAGGCCACTGCTCAGTGTCGCCGTAATGGAAACTTCTCAGCTGGTTGTGAGCCGCAACAGCTCTGGTTCACACCCTGCGACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS TCA 90 bp AGCCCCGAGATCCACTGGCGGTCACAGCCTCGCTGTCGCAGGGTGTaGACCAGAGCTGTTGCGGCTCACAACCAGCTGAGAAGTTTCCAT +
Preference number: 5 (lower is better)
Translates to: SPEIHWRSQPRCRRV*TRAVAAHNQLRSFH
Trigger: ATGGAAACTTCTCAGCTGGTTGTGAGCCGCAACAGCTCTGGTTCACACCCTGCGACAGCGAGGCTGTGACCGCCAGTGGATCTCGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS CCA 90 bp CAGATGCAGGTTGTGCCTTCTTCCGGTGGAAGAAGACTGGGACCATaGACACTGCCTCGCTGGCCTTTCCTCTGCAGGGCGGAGGCAGAA +
Preference number: 5 (lower is better)
Translates to: QMQVVPSSGGRRLGP*TLPRWPFLCRAEAE
Trigger: TTCTGCCTCCGCCCTGCAGAGGAAAGGCCAGCGAGGCAGTGTCCATGGTCCCAGTCTTCTTCCACCGGAAGAAGGCACAACCTGCATCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR CAA 90 bp AGAGGATGGCACCTCACATCAAAGGGACCCACCTTGACAACCAGACCCTTCCCTGAGCCCCCGGAGTGCTaGAGCTCTCCTGGAAGCCCT +
Preference number: 5 (lower is better)
Translates to: RGWHLTSKGPTLTTRPFPEPPEC*SSPGSP
Trigger: AGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTC...AGGGAAGGGTCTGGTTGTCAAGGTGGGTCCCTTTGATGTGAGGTGCCATCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CAA 90 bp AGAGGATGGCACCTCACATCAAAGGGACCCACCTTGACAACCAGACCCTTCCCTACGAGGGAGGGGTCTTaGGGTGAGCCTGGGGAGCCT +
Preference number: 5 (lower is better)
Translates to: RGWHLTSKGPTLTTRPFPTREGS*GEPGEP
Trigger: AGGCTCCCCAGGCTCACCCAAAGACCCCTCCCTCGT...AGGGAAGGGTCTGGTTGTCAAGGTGGGTCCCTTTGATGTGAGGTGCCATCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CAA 90 bp AAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCTTGAACACGGGCAGTGTGTCCGGCTGCAGATGCAGGTaGTGCCTTCTTCCGGTGGAA +
Preference number: 5 (lower is better)
Translates to: KRLGLPPPSSPLNTGSVSGCRCR*CLLPVE
Trigger: TTCCACCGGAAGAAGGCACAACCTGCATCTGCAGCC...GGACACACTGCCCGTGTTCAAGGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR CAA 90 bp CACCTTGACAACCAGACCCTTCCCTCCCCGTGGGGTTTCGAGGTCTGGATTCCCGGCTGCAGATGCAGGTaGTGCCTTCTTCCGGTGGAA +
Preference number: 5 (lower is better)
Translates to: HLDNQTLPSPWGFEVWIPGCRCR*CLLPVE
Trigger: TTCCACCGGAAGAAGGCACAACCTGCATCTGCAGCC...GGGAATCCAGACCTCGAAACCCCACGGGGAGGGAAGGGTCTGGTTGTCAAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR CAA 90 bp GGCTCCCTTCAGCTCTGCAATCCGGCGACAAAGCCACAACCACAGACGGTCTCCGTCCTTGCGTTGCCTTaGCAGTGGACAGACAGCAGC +
Preference number: 5 (lower is better)
Translates to: GSLQLCNPATKPQPQTVSVLALP*QWTDSS
Trigger: GCTGCTGTCTGTCCACTGCAAAGGCAACGCAAGGAC...GGAGACCGTCTGTGGTTGTGGCTTTGTCGCCGGATTGCAGAGCTGAAGGGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CAA 90 bp CTCTTTCTAATAAAATCTCACATGGACCCAACACAGGAGACAGGAGGGCTGTGCGGTCCTCCAGTGCCGTaGCCACGGGCTTGGCCCGGC +
Preference number: 5 (lower is better)
Translates to: LFLIKSHMDPTQETGGLCGPPVP*PRAWPG
Trigger: GCCGGGCCAAGCCCGTGGCAACGGCACTGGAGGACC...GCACAGCCCTCCTGTCTCCTGTGTTGGGTCCATGTGAGATTTTATTAGAAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CAA 90 bp TTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCCCAGGCAGCAGCCCCTTTaGGCCCCCATGATTCACCAA +
Preference number: 5 (lower is better)
Translates to: FPTSHNRKRLGLPPPSSPRQQPL*APMIHQ
Trigger: TTGGTGAATCATGGGGGCCAAAAGGGGCTGCTGCCT...GGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CAA 90 bp TCGAGGTCTGGATTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTACGAGGGAGGGGTCTTaGGGTGAGCCTGGGGAGCCT +
Preference number: 5 (lower is better)
Translates to: SRSGFPTSHNRKRLGLPPTREGS*GEPGEP
Trigger: AGGCTCCCCAGGCTCACCCAAAGACCCCTCCCTCGT...AGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAATCCAGACCTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CAA 90 bp TCGAGGTCTGGATTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCGCAAAAGGCTGGGTTaGCCTCCTCCGAGCAGCCCC +
Preference number: 5 (lower is better)
Translates to: SRSGFPTSHNRKRLGLPPRKRLG*PPPSSP
Trigger: GGGGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCG...AGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAATCCAGACCTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CAA 90 bp GAGGGGTCTTTGGGTGAGCCTGGGGAGCCTCAACTGTTAGCAGTCGAATCCTCTAGAGGCCCCTGGTGTTaGTCATCCACAGGGCTCCCT +
Preference number: 5 (lower is better)
Translates to: EGSLGEPGEPQLLAVESSRGPWC*SSTGLP
Trigger: AGGGAGCCCTGTGGATGACAAACACCAGGGGCCTCT...AGAGGATTCGACTGCTAACAGTTGAGGCTCCCCAGGCTCACCCAAAGACCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR CAA 90 bp GAAACAGCCCCTTTTGTTACCTCCACCCGCAACTCTGGGCTCCCTGGATTCCAACCCTGGCACCTGGAGTaGCAGGGACACACCCTGACT +
Preference number: 5 (lower is better)
Translates to: ETAPFVTSTRNSGLPGFQPWHLE*QGHTLT
Trigger: AGTCAGGGTGTGTCCCTGCAACTCCAGGTGCCAGGG...TTGGAATCCAGGGAGCCCAGAGTTGCGGGTGGAGGTAACAAAAGGGGCTGTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS GCA 90 bp AGTAGTTTGGCCACAGGCCTAACCCAATGGCCCTGGGGCTGCAGATaGAGGTTGTGCCTTCTTCCGGTGGAAGAAGACTGGGACCATGGA +
Preference number: 5 (lower is better)
Translates to: SSLATGLTQWPWGCR*RLCLLPVEEDWDHG
Trigger: TCCATGGTCCCAGTCTTCTTCCACCGGAAGAAGGCACAACCTGCATCTGCAGCCCCAGGGCCATTGGGTTAGGCCTGTGGCCAAACTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS CCA 90 bp TCCCAGCACCTTAGTAGTTTGGCCACAGGCCTAACCCAATGGCCCTaGGGCTGCAGATGCAGGTTGTGCCTTCTTCCGGTGGAAGAAGAC +
Preference number: 5 (lower is better)
Translates to: SQHLSSLATGLTQWP*GCRCRLCLLPVEED
Trigger: GTCTTCTTCCACCGGAAGAAGGCACAACCTGCATCTGCAGCCCCAGGGCCATTGGGTTAGGCCTGTGGCCAAACTACTAAGGTGCTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS CCA 90 bp TCAGTCTCCCAGCACCTTAGTAGTTTGGCCACAGGCCTAACCCAATaGCCCTGGGGCTGCAGATGCAGGTTGTGCCTTCTTCCGGTGGAA +
Preference number: 5 (lower is better)
Translates to: SVSQHLSSLATGLTQ*PWGCRCRLCLLPVE
Trigger: TTCCACCGGAAGAAGGCACAACCTGCATCTGCAGCCCCAGGGCCATTGGGTTAGGCCTGTGGCCAAACTACTAAGGTGCTGGGAGACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR CAA 90 bp GATTCCCCACAAGCCATAATCGCAAAAGGCTGGGTTTGCCTCCTCCGAGCAGCCAGGCAGCAGCCCCTTTaGGCCCCCATGATTCACCAA +
Preference number: 5 (lower is better)
Translates to: DSPQAIIAKGWVCLLRAARQQPL*APMIHQ
Trigger: TTGGTGAATCATGGGGGCCAAAAGGGGCTGCTGCCT...GGCTGCTCGGAGGAGGCAAACCCAGCCTTTTGCGATTATGGCTTGTGGGGAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CAA 90 bp GAAACAGCCCCTTTTGTTACCTCCACCCGCAACTCTGGGCTCCCTGGATTCCAAAGAGGCCCCTGGTGTTaGTCATCCACAGGGCTCCCT +
Preference number: 5 (lower is better)
Translates to: ETAPFVTSTRNSGLPGFQRGPWC*SSTGLP
Trigger: AGGGAGCCCTGTGGATGACAAACACCAGGGGCCTCT...TTGGAATCCAGGGAGCCCAGAGTTGCGGGTGGAGGTAACAAAAGGGGCTGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CAA 90 bp AGAGGATGGCACCTCACATCAAAGGGACCCACCTTGACAACCAGACCCTTCCCTAGAGGCCCCTGGTGTTaGTCATCCACAGGGCTCCCT +
Preference number: 5 (lower is better)
Translates to: RGWHLTSKGPTLTTRPFPRGPWC*SSTGLP
Trigger: AGGGAGCCCTGTGGATGACAAACACCAGGGGCCTCT...AGGGAAGGGTCTGGTTGTCAAGGTGGGTCCCTTTGATGTGAGGTGCCATCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS-3UTR CAA 90 bp TTCTGGAAACAGCCCCTTTTGTTACCTCCACCCGCAACTCTGGGCTCCCTGGATAGGCAGCAGCCCCTTTaGGCCCCCATGATTCACCAA +
Preference number: 5 (lower is better)
Translates to: FWKQPLLLPPPATLGSLDRQQPL*APMIHQ
Trigger: TTGGTGAATCATGGGGGCCAAAAGGGGCTGCTGCCT...ATCCAGGGAGCCCAGAGTTGCGGGTGGAGGTAACAAAAGGGGCTGTTTCCAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CAA 90 bp GAAACAGCCCCTTTTGTTACCTCCACCCGCAACTCTGGGCTCCCTGGATTCCAAAGGCACGTCCTTGCGTaGCCTTTGCAGTGGACAGAC +
Preference number: 5 (lower is better)
Translates to: ETAPFVTSTRNSGLPGFQRHVLA*PLQWTD
Trigger: GTCTGTCCACTGCAAAGGCAACGCAAGGACGTGCCT...TTGGAATCCAGGGAGCCCAGAGTTGCGGGTGGAGGTAACAAAAGGGGCTGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CAA 90 bp AGAGGATGGCACCTCACATCAAAGGGACCCACCTTGACAACCAGACCCTTCCCTAAGCCAGGCACGTCCTaGCGTTGCCTTTGCAGTGGA +
Preference number: 5 (lower is better)
Translates to: RGWHLTSKGPTLTTRPFPKPGTS*RCLCSG
Trigger: TCCACTGCAAAGGCAACGCAAGGACGTGCCTGGCTT...AGGGAAGGGTCTGGTTGTCAAGGTGGGTCCCTTTGATGTGAGGTGCCATCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CAA 90 bp CTCTTTCTAATAAAATCTCACATGGACCCAACACAGGAGACAGGAGGGCTGTGCACCCCTCCCAGGCCCTaGAGAGTTGAGCCTCGGGCA +
Preference number: 5 (lower is better)
Translates to: LFLIKSHMDPTQETGGLCTPPRP*RVEPRA
Trigger: TGCCCGAGGCTCAACTCTCAAGGGCCTGGGAGGGGT...GCACAGCCCTCCTGTCTCCTGTGTTGGGTCCATGTGAGATTTTATTAGAAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331952.6
ENST00000557649.6
ENST00000619279.4
ENST00000630349.2
CDS-3UTR CAA 90 bp GCTTTGGCCACTGAGGCCGATTCCTTAGCAAATCGGTTCTGGTTTCTCTCATTTGGGTGTCTGGGCCCCTaGCTGTCCCCTCGGCTTCTA +
Preference number: 5 (lower is better)
Translates to: ALATEADSLANRFWFLSFGCLGP*LSPRLL
Trigger: TAGAAGCCGAGGGGACAGCAAGGGGCCCAGACACCC...AAATGAGAGAAACCAGAACCGATTTGCTAAGGAATCGGCCTCAGTGGCCAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CAA 90 bp CTCTTTCTAATAAAATCTCACATGGACCCAACACAGGAGACAGGAGGGCTGTGCCAGCACCTTAGTAGTTaGGCCACAGGCCTAACCCAA +
Preference number: 5 (lower is better)
Translates to: LFLIKSHMDPTQETGGLCQHLSS*ATGLTQ
Trigger: TTGGGTTAGGCCTGTGGCCAAACTACTAAGGTGCTG...GCACAGCCCTCCTGTCTCCTGTGTTGGGTCCATGTGAGATTTTATTAGAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS-3UTR CAA 90 bp GCTTTGGCCACTGAGGCCGATTCCTTAGCAAATCGGTTCTGGTTTCTCTCATTTTGGAAACAGCCCCTTTaGTTACCTCCACCCGCAACT +
Preference number: 5 (lower is better)
Translates to: ALATEADSLANRFWFLSFWKQPL*LPPPAT
Trigger: AGTTGCGGGTGGAGGTAACAAAAGGGGCTGTTTCCA...AAATGAGAGAAACCAGAACCGATTTGCTAAGGAATCGGCCTCAGTGGCCAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS-3UTR CAA 90 bp TGTGTTTTAATAAAACAGTGTCTCCCAGTTAAGTGGTGGGACAAACAGGAACCAAAGCCAGGCACGTCCTaGCGTTGCCTTTGCAGTGGA +
Preference number: 5 (lower is better)
Translates to: CVLIKQCLPVKWWDKQEPKPGTS*RCLCSG
Trigger: TCCACTGCAAAGGCAACGCAAGGACGTGCCTGGCTT...TGGTTCCTGTTTGTCCCACCACTTAACTGGGAGACACTGTTTTATTAAAACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557649.6
ENST00000630349.2
CDS GCA 72 bp AGCCGCAGGAGGCCGCGCCAGCAGGTGAGGGCCACGTaGCGCAGGTGCAGGACAAGGCCGAGGAGCCGGGCC +
Preference number: 6 (lower is better)
Translates to: SRRRPRQQVRAT*RRCRTRPRSRA
Trigger: GGCCCGGCTCCTCGGCCTTGTCCTGCACCTGCGGCACGTGGCCCTCACCTGCTGGCGCGGCCTCCTGCGGCT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS CAA 72 bp CGGGCCCGCAGGTCCTCCAGTGCCGTTGCCACGGGCTaGGCCCGGCCGCAGTATAGGCCCAGGGCCAGCACG +
Preference number: 6 (lower is better)
Translates to: RARRSSSAVATG*ARPQYRPRAST
Trigger: CGTGCTGGCCCTGGGCCTATACTGCGGCCGGGCCAAGCCCGTGGCAACGGCACTGGAGGACCTGCGGGCCCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS CAA 90 bp CCGAGGAGCCGGGCCCGCAGGTCCTCCAGTGCCGTTGCCACGGGCTaGGCCCGGCCGCAGTATAGGCCCAGGGCCAGCACGAGCAGGACG +
Preference number: 6 (lower is better)
Translates to: PRSRARRSSSAVATG*ARPQYRPRASTSRT
Trigger: CGTCCTGCTCGTGCTGGCCCTGGGCCTATACTGCGGCCGGGCCAAGCCCGTGGCAACGGCACTGGAGGACCTGCGGGCCCGGCTCCTCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS GCA 72 bp CCCAGGGCCAGCACGAGCAGGACGCACACACACAGCTaGAGGAGCAGGGAGCCGCCGTGTGGCCTGGGCCGG +
Preference number: 6 (lower is better)
Translates to: PRASTSRTHTHS*RSREPPCGLGR
Trigger: CCGGCCCAGGCCACACGGCGGCTCCCTGCTCCTGCAGCTGTGTGTGTGCGTCCTGCTCGTGCTGGCCCTGGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000630349.2
CDS CAA 72 bp GCAGTGGCCTCAGCGGCCCTGAGGGCCCCGGCTGACTaGCTGCTCTCGGGACAGCCCGGTCCATGGGGAGGC +
Preference number: 6 (lower is better)
Translates to: AVASAALRAPAD*LLSGQPGPWGG
Trigger: GCCTCCCCATGGACCGGGCTGTCCCGAGAGCAGCAAGTCAGCCGGGGCCCTCAGGGCCGCTGAGGCCACTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS CAA 72 bp TGGAGGCGCCACCGCCCGCTGGCAGGGCCGGGTCTGTaGTGGCCTTCGTCCCGTCTCCAGCCCTCTCTGCTG +
Preference number: 6 (lower is better)
Translates to: WRRHRPLAGPGL*WPSSRLQPSLL
Trigger: CAGCAGAGAGGGCTGGAGACGGGACGAAGGCCACAACAGACCCGGCCCTGCCAGCGGGCGGTGGCGCCTCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630349.2
CDS CCA 72 bp GGCTGTCTCGGAGCCCCCGGAGTGCTTGAGCTCTCCTaGAAGCCCTGCCCGTCCTGCCCGTCCTGCCCGTCA +
Preference number: 6 (lower is better)
Translates to: GCLGAPGVLELS*KPCPSCPSCPS
Trigger: TGACGGGCAGGACGGGCAGGACGGGCAGGGCTTCCAGGAGAGCTCAAGCACTCCGGGGGCTCCGAGACAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS CCA 72 bp CCGGCTGACTTGCTGCTCTCGGGACAGCCCGGTCCATaGGGAGGCCGTCAACCACGGGCTTGGTGGCCCCAG +
Preference number: 6 (lower is better)
Translates to: PADLLLSGQPGP*GGRQPRAWWPQ
Trigger: CTGGGGCCACCAAGCCCGTGGTTGACGGCCTCCCCATGGACCGGGCTGTCCCGAGAGCAGCAAGTCAGCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS CCA 72 bp AGGCGCCACCGCCCGCTGGCAGGGCCGGGTCTGTTGTaGCCTTCGTCCCGTCTCCAGCCCTCTCTGCTGGAT +
Preference number: 6 (lower is better)
Translates to: RRHRPLAGPGLL*PSSRLQPSLLD
Trigger: ATCCAGCAGAGAGGGCTGGAGACGGGACGAAGGCCACAACAGACCCGGCCCTGCCAGCGGGCGGTGGCGCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630349.2
CDS CAA 90 bp GCTCTGATCTGGAGGCGCCACCGCCCGCTGGCAGGGCCGGGTCTGTaGTGGCCTTCGTCCCGTCTCCAGCCCTCTCTGCTGGATCGCAAA +
Preference number: 6 (lower is better)
Translates to: ALIWRRHRPLAGPGL*WPSSRLQPSLLDRK
Trigger: TTTGCGATCCAGCAGAGAGGGCTGGAGACGGGACGAAGGCCACAACAGACCCGGCCCTGCCAGCGGGCGGTGGCGCCTCCAGATCAGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630349.2
CDS TCA 72 bp GGACCCTCTTGGCCGGCAGCACCCCTCCCAGGCCCTTaGGAGTTGAGCCTCGGGCAGAACTGCAGGGCACAC +
Preference number: 6 (lower is better)
Translates to: GPSWPAAPLPGP*ELSLGQNCRAH
Trigger: GTGTGCCCTGCAGTTCTGCCCGAGGCTCAACTCTCAAGGGCCTGGGAGGGGTGCTGCCGGCCAAGAGGGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331952.6
ENST00000557649.6
ENST00000619279.4
ENST00000630349.2
CDS TCA 72 bp CGCGGGCCCCACGCGGCCTCCTCATTCTTTCTGGTCTaGCGTCGTGTCTCTGGCCGGGAGTCAGGGCTCACG +
Preference number: 6 (lower is better)
Translates to: RGPHAASSFFLV*RRVSGRESGLT
Trigger: CGTGAGCCCTGACTCCCGGCCAGAGACACGACGTCAGACCAGAAAGAATGAGGAGGCCGCGTGGGGCCCGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS TCA 72 bp CATTACGGCGACACTGAGCAGTGGCCTCAGCGGCCCTaGGGGCCCCGGCTGACTTGCTGCTCTCGGGACAGC +
Preference number: 6 (lower is better)
Translates to: HYGDTEQWPQRP*GPRLTCCSRDS
Trigger: GCTGTCCCGAGAGCAGCAAGTCAGCCGGGGCCCTCAGGGCCGCTGAGGCCACTGCTCAGTGTCGCCGTAATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS CCA 72 bp ACACCCGCGGGCCCCACGCGGCCTCCTCATTCTTTCTaGTCTGACGTCGTGTCTCTGGCCGGGAGTCAGGGC +
Preference number: 6 (lower is better)
Translates to: TPAGPTRPPHSF*SDVVSLAGSQG
Trigger: GCCCTGACTCCCGGCCAGAGACACGACGTCAGACCAGAAAGAATGAGGAGGCCGCGTGGGGCCCGCGGGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS TCA 72 bp TCCTGCTGGTGCTGTACCTCCGGGGTGGCTCAGGCCTaGTCAGCCCCGAGATCCACTGGCGGTCACAGCCTC +
Preference number: 6 (lower is better)
Translates to: SCWCCTSGVAQA*SAPRSTGGHSL
Trigger: GAGGCTGTGACCGCCAGTGGATCTCGGGGCTGATCAGGCCTGAGCCACCCCGGAGGTACAGCACCAGCAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS CAA 90 bp CCCAGGAGGAGCTGGGCCTCCTCAGTCTCCCAGCACCTTAGTAGTTaGGCCACAGGCCTAACCCAATGGCCCTGGGGCTGCAGATGCAGG +
Preference number: 6 (lower is better)
Translates to: PRRSWASSVSQHLSS*ATGLTQWPWGCRCR
Trigger: CCTGCATCTGCAGCCCCAGGGCCATTGGGTTAGGCCTGTGGCCAAACTACTAAGGTGCTGGGAGACTGAGGAGGCCCAGCTCCTCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS TCA 72 bp TCACAACCAGCTGAGAAGTTTCCATTACGGCGACACTaGGCAGTGGCCTCAGCGGCCCTGAGGGCCCCGGCT +
Preference number: 6 (lower is better)
Translates to: SQPAEKFPLRRH*AVASAALRAPA
Trigger: AGCCGGGGCCCTCAGGGCCGCTGAGGCCACTGCTCAGTGTCGCCGTAATGGAAACTTCTCAGCTGGTTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS CCA 72 bp GGCGTTCTTGTCAGCAATGTAGTGGACGGTCACCGCTaGGGGTTCTCGGAACCACACGCGCCTCGAGGTCCT +
Preference number: 6 (lower is better)
Translates to: GVLVSNVVDGHR*GFSEPHAPRGP
Trigger: AGGACCTCGAGGCGCGTGTGGTTCCGAGAACCCCCAGCGGTGACCGTCCACTACATTGCTGACAAGAACGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331952.6
ENST00000410013.1
ENST00000557649.6
ENST00000618752.2
ENST00000619279.4
ENST00000630349.2
CDS CAA 72 bp AGCTGGGCCTCCTCAGTCTCCCAGCACCTTAGTAGTTaGGCCACAGGCCTAACCCAATGGCCCTGGGGCTGC +
Preference number: 6 (lower is better)
Translates to: SWASSVSQHLSS*ATGLTQWPWGC
Trigger: GCAGCCCCAGGGCCATTGGGTTAGGCCTGTGGCCAAACTACTAAGGTGCTGGGAGACTGAGGAGGCCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS TCA 72 bp ATCCACTGGCGGTCACAGCCTCGCTGTCGCAGGGTGTaGACCAGAGCTGTTGCGGCTCACAACCAGCTGAGA +
Preference number: 6 (lower is better)
Translates to: IHWRSQPRCRRV*TRAVAAHNQLR
Trigger: TCTCAGCTGGTTGTGAGCCGCAACAGCTCTGGTTCACACCCTGCGACAGCGAGGCTGTGACCGCCAGTGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS GCA 72 bp GCCACAGGCCTAACCCAATGGCCCTGGGGCTGCAGATaGAGGTTGTGCCTTCTTCCGGTGGAAGAAGACTGG +
Preference number: 6 (lower is better)
Translates to: ATGLTQWPWGCR*RLCLLPVEEDW
Trigger: CCAGTCTTCTTCCACCGGAAGAAGGCACAACCTGCATCTGCAGCCCCAGGGCCATTGGGTTAGGCCTGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS GCA 72 bp TCGTGTCTCTGGCCGGGAGTCAGGGCTCACGGCTCCTaGTGCAGTCCTCATTTACTGGAACATGGTCCTGGG +
Preference number: 6 (lower is better)
Translates to: SCLWPGVRAHGS*CSPHLLEHGPG
Trigger: CCCAGGACCATGTTCCAGTAAATGAGGACTGCAGCAGGAGCCGTGAGCCCTGACTCCCGGCCAGAGACACGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS CCA 72 bp GTTGTGCCTTCTTCCGGTGGAAGAAGACTGGGACCATaGACACTGCCTCGCTGGCCTTTCCTCTGCAGGGCG +
Preference number: 6 (lower is better)
Translates to: VVPSSGGRRLGP*TLPRWPFLCRA
Trigger: CGCCCTGCAGAGGAAAGGCCAGCGAGGCAGTGTCCATGGTCCCAGTCTTCTTCCACCGGAAGAAGGCACAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS CAA 90 bp TTGGCCACAGGCCTAACCCAATGGCCCTGGGGCTGCAGATGCAGGTaGTGCCTTCTTCCGGTGGAAGAAGACTGGGACCATGGACACTGC +
Preference number: 6 (lower is better)
Translates to: LATGLTQWPWGCRCR*CLLPVEEDWDHGHC
Trigger: GCAGTGTCCATGGTCCCAGTCTTCTTCCACCGGAAGAAGGCACAACCTGCATCTGCAGCCCCAGGGCCATTGGGTTAGGCCTGTGGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS GCA 72 bp TCGTGTCTCTGGCCGGGAGTCAGGGCTCACGGCTCCTaGTGCAGTCCTCATTTACTGGAACATGGTCCTGGT +
Preference number: 6 (lower is better)
Translates to: SCLWPGVRAHGS*CSPHLLEHGPG
Trigger: ACCAGGACCATGTTCCAGTAAATGAGGACTGCAGCAGGAGCCGTGAGCCCTGACTCCCGGCCAGAGACACGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331952.6
ENST00000557649.6
ENST00000619279.4
ENST00000630349.2
CDS CAA 72 bp GGCCTAACCCAATGGCCCTGGGGCTGCAGATGCAGGTaGTGCCTTCTTCCGGTGGAAGAAGACTGGGACCAT +
Preference number: 6 (lower is better)
Translates to: GLTQWPWGCRCR*CLLPVEEDWDH
Trigger: ATGGTCCCAGTCTTCTTCCACCGGAAGAAGGCACAACCTGCATCTGCAGCCCCAGGGCCATTGGGTTAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS CCA 72 bp CTTAGTAGTTTGGCCACAGGCCTAACCCAATGGCCCTaGGGCTGCAGATGCAGGTTGTGCCTTCTTCCGGTG +
Preference number: 6 (lower is better)
Translates to: LSSLATGLTQWP*GCRCRLCLLPV
Trigger: CACCGGAAGAAGGCACAACCTGCATCTGCAGCCCCAGGGCCATTGGGTTAGGCCTGTGGCCAAACTACTAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS TCA 72 bp GGGTGTGAACCAGAGCTGTTGCGGCTCACAACCAGCTaGGAAGTTTCCATTACGGCGACACTGAGCAGTGGC +
Preference number: 6 (lower is better)
Translates to: GCEPELLRLTTS*EVSITATLSSG
Trigger: GCCACTGCTCAGTGTCGCCGTAATGGAAACTTCTCAGCTGGTTGTGAGCCGCAACAGCTCTGGTTCACACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS GCA 72 bp ACAGCCTCGCTGTCGCAGGGTGTGAACCAGAGCTGTTaGGGCTCACAACCAGCTGAGAAGTTTCCATTACGG +
Preference number: 6 (lower is better)
Translates to: TASLSQGVNQSC*GSQPAEKFPLR
Trigger: CCGTAATGGAAACTTCTCAGCTGGTTGTGAGCCGCAACAGCTCTGGTTCACACCCTGCGACAGCGAGGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS CCA 72 bp AGATGCAGGTTGTGCCTTCTTCCGGTGGAAGAAGACTaGGACCATGGACACTGCCTCGCTGGCCTTTCCTCT +
Preference number: 6 (lower is better)
Translates to: RCRLCLLPVEED*DHGHCLAGLSS
Trigger: AGAGGAAAGGCCAGCGAGGCAGTGTCCATGGTCCCAGTCTTCTTCCACCGGAAGAAGGCACAACCTGCATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2
CDS CCA 72 bp CAGCACCTTAGTAGTTTGGCCACAGGCCTAACCCAATaGCCCTGGGGCTGCAGATGCAGGTTGTGCCTTCTT +
Preference number: 6 (lower is better)
Translates to: QHLSSLATGLTQ*PWGCRCRLCLL
Trigger: AAGAAGGCACAACCTGCATCTGCAGCCCCAGGGCCATTGGGTTAGGCCTGTGGCCAAACTACTAAGGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410013.1
ENST00000618752.2