Pregenerated sensors for C11ORF52 (Homo sapiens)
Ensembl gene IDs: ENSG00000149300Ensembl transcript IDs: ENST00000278601.6, ENST00000527286.5, ENST00000529012.1, ENST00000529342.5
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGGGAAGTTTCCAGGCCTCACTGTGCTGTCGGTTATCACTGACTTaGGGTCCTGAAAGCGTTTCCTCCACGCCTCAGCCCCCTTCCCCC | + |
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Preference number: 1 (lower is better) Translates to: EGSFQASLCCRLSLT*GPESVSSTPQPPSP Trigger: GGGGGAAGGGGGCTGAGGCGTGGAGGAAACGCTTTCAGGACCTCAAGTCAGTGATAACCGACAGCACAGTGAGGCCTGGAAACTTCCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| 3UTR TCA 90 bp | CCTCCGAGGGAAGTTTCCAGGCCTCACTGTGCTGTCGGTTATCACTaGCTTGAGGTCCTGAAAGCGTTTCCTCCACGCCTCAGCCCCCTT | + |
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Preference number: 1 (lower is better) Translates to: PPREVSRPHCAVGYH*LEVLKAFPPRLSPL Trigger: AAGGGGGCTGAGGCGTGGAGGAAACGCTTTCAGGACCTCAAGTCAGTGATAACCGACAGCACAGTGAGGCCTGGAAACTTCCCTCGGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| 3UTR CCA 90 bp | TTCCTCCACGCCTCAGCCCCCTTCCCCCATTTGTCTGTTAAGGTCTaGAACCTGACTCAGCCACTGAGGAAATGGCCCAAGCCAGCCCTA | + |
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Preference number: 1 (lower is better) Translates to: FLHASAPFPHLSVKV*NLTQPLRKWPKPAL Trigger: TAGGGCTGGCTTGGGCCATTTCCTCAGTGGCTGAGTCAGGTTCCAGACCTTAACAGACAAATGGGGGAAGGGGGCTGAGGCGTGGAGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| 3UTR TCA 90 bp | TTTCCAGGCCTCACTGTGCTGTCGGTTATCACTGACTTGAGGTCCTaGAAGCGTTTCCTCCACGCCTCAGCCCCCTTCCCCCATTTGTCT | + |
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Preference number: 1 (lower is better) Translates to: FPGLTVLSVITDLRS*KRFLHASAPFPHLS Trigger: AGACAAATGGGGGAAGGGGGCTGAGGCGTGGAGGAAACGCTTTCAGGACCTCAAGTCAGTGATAACCGACAGCACAGTGAGGCCTGGAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| 3UTR GCA 90 bp | CCCACGTGCTTATGGGCTAACTTTTTACCTGCTCTTTCTGCACTTTaGAAGAGCAGGAGCAACAATGGTGGGGTCGAAGACCTACCTCCC | + |
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Preference number: 1 (lower is better) Translates to: PTCLWANFLPALSAL*KSRSNNGGVEDLPP Trigger: GGGAGGTAGGTCTTCGACCCCACCATTGTTGCTCCTGCTCTTGCAAAGTGCAGAAAGAGCAGGTAAAAAGTTAGCCCATAAGCACGTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| 3UTR CCA 90 bp | TTTACCTGCTCTTTCTGCACTTTGCAAGAGCAGGAGCAACAATGGTaGGGTCGAAGACCTACCTCCCTGCACACTCCACCTAACCTCATG | + |
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Preference number: 1 (lower is better) Translates to: FTCSFCTLQEQEQQW*GRRPTSLHTPPNLM Trigger: CATGAGGTTAGGTGGAGTGTGCAGGGAGGTAGGTCTTCGACCCCACCATTGTTGCTCCTGCTCTTGCAAAGTGCAGAAAGAGCAGGTAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| 3UTR CCA 90 bp | CTTTTTACCTGCTCTTTCTGCACTTTGCAAGAGCAGGAGCAACAATaGTGGGGTCGAAGACCTACCTCCCTGCACACTCCACCTAACCTC | + |
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Preference number: 1 (lower is better) Translates to: LFTCSFCTLQEQEQQ*WGRRPTSLHTPPNL Trigger: GAGGTTAGGTGGAGTGTGCAGGGAGGTAGGTCTTCGACCCCACCATTGTTGCTCCTGCTCTTGCAAAGTGCAGAAAGAGCAGGTAAAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| 3UTR CCA 90 bp | CATTTGTCTGTTAAGGTCTGGAACCTGACTCAGCCACTGAGGAAATaGCCCAAGCCAGCCCTAGTGTCTGAATGTAAAAGCTCAGAATGC | + |
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Preference number: 1 (lower is better) Translates to: HLSVKVWNLTQPLRK*PKPALVSECKSSEC Trigger: GCATTCTGAGCTTTTACATTCAGACACTAGGGCTGGCTTGGGCCATTTCCTCAGTGGCTGAGTCAGGTTCCAGACCTTAACAGACAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| 3UTR CCA 90 bp | TGGGGTCGAAGACCTACCTCCCTGCACACTCCACCTAACCTCATGTaGATAGCTAAGTTTAGCTATCCACCCATAGCTAAACCAACTATT | + |
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Preference number: 1 (lower is better) Translates to: WGRRPTSLHTPPNLM*IAKFSYPPIAKPTI Trigger: AATAGTTGGTTTAGCTATGGGTGGATAGCTAAACTTAGCTATCCACATGAGGTTAGGTGGAGTGTGCAGGGAGGTAGGTCTTCGACCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| 3UTR CCA 90 bp | AGGATACCATTAATTAAAGTCCAACAAGATCAGCCCACGTGCTTATaGGCTAACTTTTTACCTGCTCTTTCTGCACTTTGCAAGAGCAGG | + |
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Preference number: 1 (lower is better) Translates to: RIPLIKVQQDQPTCL*ANFLPALSALCKSR Trigger: CCTGCTCTTGCAAAGTGCAGAAAGAGCAGGTAAAAAGTTAGCCCATAAGCACGTGGGCTGATCTTGTTGGACTTTAATTAATGGTATCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| 3UTR-3UTR GCA 90 bp | TTGATCCTAGCGGCCCCGCACCTGCGAGAGCCAACAGTCCCTCCGAGGGAAGTTGAAGACCTACCTCCCTaGACACTCCACCTAACCTCA | + |
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Preference number: 2 (lower is better) Translates to: LILAAPHLREPTVPPREVEDLPP*TLHLTS Trigger: TGAGGTTAGGTGGAGTGTGCAGGGAGGTAGGTCTTC...AACTTCCCTCGGAGGGACTGTTGGCTCTCGCAGGTGCGGGGCCGCTAGGATCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| 3UTR-3UTR CCA 90 bp | TTTGCAAGAGCAGGAGCAACAATGGTGGGGTCGAAGACCTACCTCCCTGCACACGGCCAGGGGAGAAAATaGGACGCCCACAATTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: FARAGATMVGSKTYLPAHGQGRK*DAHNSR Trigger: CCTGGAATTGTGGGCGTCCCATTTTCTCCCCTGGCC...GTGTGCAGGGAGGTAGGTCTTCGACCCCACCATTGTTGCTCCTGCTCTTGCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| 3UTR-3UTR CCA 90 bp | TTGATCCTAGCGGCCCCGCACCTGCGAGAGCCAACAGTCCCTCCGAGGGAAGTTCAGCCCACGTGCTTATaGGCTAACTTTTTACCTGCT | + |
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Preference number: 2 (lower is better) Translates to: LILAAPHLREPTVPPREVQPTCL*ANFLPA Trigger: AGCAGGTAAAAAGTTAGCCCATAAGCACGTGGGCTG...AACTTCCCTCGGAGGGACTGTTGGCTCTCGCAGGTGCGGGGCCGCTAGGATCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| 3UTR-3UTR CCA 90 bp | GTTAAGGTCTGGAACCTGACTCAGCCACTGAGGAAATGGCCCAAGCCAGCCCTACAGGAGCAACAATGGTaGGGTCGAAGACCTACCTCC | + |
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Preference number: 2 (lower is better) Translates to: VKVWNLTQPLRKWPKPALQEQQW*GRRPTS Trigger: GGAGGTAGGTCTTCGACCCCACCATTGTTGCTCCTG...TAGGGCTGGCTTGGGCCATTTCCTCAGTGGCTGAGTCAGGTTCCAGACCTTAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| 3UTR-3UTR GCA 90 bp | TTGATCCTAGCGGCCCCGCACCTGCGAGAGCCAACAGTCCCTCCGAGGGAAGTTCAAGATCAGCCCACGTaGTTATGGGCTAACTTTTTA | + |
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Preference number: 2 (lower is better) Translates to: LILAAPHLREPTVPPREVQDQPT*LWANFL Trigger: TAAAAAGTTAGCCCATAAGCACGTGGGCTGATCTTG...AACTTCCCTCGGAGGGACTGTTGGCTCTCGCAGGTGCGGGGCCGCTAGGATCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| 3UTR-3UTR GCA 90 bp | TCTGTTAAGGTCTGGAACCTGACTCAGCCACTGAGGAAATGGCCCAAGCCAGCCTGTAAAAGCTCAGAATaGTTTTCCGGAGCACCTCCC | + |
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Preference number: 2 (lower is better) Translates to: SVKVWNLTQPLRKWPKPACKSSE*FSGAPP Trigger: GGGAGGTGCTCCGGAAAAGCATTCTGAGCTTTTACA...GGCTGGCTTGGGCCATTTCCTCAGTGGCTGAGTCAGGTTCCAGACCTTAACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| 3UTR-3UTR CCA 90 bp | AAAGTCCAACAAGATCAGCCCACGTGCTTATGGGCTAACTTTTTACCTGCTCTTCGTGGACAACATCCCTaGGTTGCCACCCAATTCCCC | + |
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Preference number: 2 (lower is better) Translates to: KVQQDQPTCLWANFLPALRGQHP*VATQFP Trigger: GGGGAATTGGGTGGCAACCCAGGGATGTTGTCCACG...AAGAGCAGGTAAAAAGTTAGCCCATAAGCACGTGGGCTGATCTTGTTGGACTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| 3UTR-3UTR CCA 90 bp | CCCTTCCCCCATTTGTCTGTTAAGGTCTGGAACCTGACTCAGCCACTGAGGAAACCACCTAACCTCATGTaGATAGCTAAGTTTAGCTAT | + |
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Preference number: 2 (lower is better) Translates to: PFPHLSVKVWNLTQPLRKPPNLM*IAKFSY Trigger: ATAGCTAAACTTAGCTATCCACATGAGGTTAGGTGG...TTTCCTCAGTGGCTGAGTCAGGTTCCAGACCTTAACAGACAAATGGGGGAAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| 3UTR-3UTR CCA 90 bp | CCCACGTGCTTATGGGCTAACTTTTTACCTGCTCTTTCTGCACTTTGCAAGAGCTTTAAGCTTAAAACGTaGACAACATCCCTGGGTTGC | + |
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Preference number: 2 (lower is better) Translates to: PTCLWANFLPALSALCKSFKLKT*TTSLGC Trigger: GCAACCCAGGGATGTTGTCCACGTTTTAAGCTTAAA...GCTCTTGCAAAGTGCAGAAAGAGCAGGTAAAAAGTTAGCCCATAAGCACGTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| 3UTR-3UTR GCA 90 bp | AACCTCATGTGGATAGCTAAGTTTAGCTATCCACCCATAGCTAAACCAACTATTACAACATCCCTGGGTTaGCACCCAATTCCCCAAAGC | + |
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Preference number: 2 (lower is better) Translates to: NLMWIAKFSYPPIAKPTITTSLG*HPIPQS Trigger: GCTTTGGGGAATTGGGTGGCAACCCAGGGATGTTGT...AATAGTTGGTTTAGCTATGGGTGGATAGCTAAACTTAGCTATCCACATGAGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| 3UTR TCA 72 bp | CTCACTGTGCTGTCGGTTATCACTGACTTGAGGTCCTaGAAGCGTTTCCTCCACGCCTCAGCCCCCTTCCCC | + |
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Preference number: 3 (lower is better) Translates to: LTVLSVITDLRS*KRFLHASAPFP Trigger: GGGGAAGGGGGCTGAGGCGTGGAGGAAACGCTTTCAGGACCTCAAGTCAGTGATAACCGACAGCACAGTGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| 3UTR-3UTR CAA 90 bp | CAGTCCCTCCGAGGGAAGTTTCCAGGCCTCACTGTGCTGTCGGTTATCACTGACGACAACATCCCTGGGTaGCCACCCAATTCCCCAAAG | + |
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Preference number: 3 (lower is better) Translates to: QSLRGKFPGLTVLSVITDDNIPG*PPNSPK Trigger: CTTTGGGGAATTGGGTGGCAACCCAGGGATGTTGTC...GTCAGTGATAACCGACAGCACAGTGAGGCCTGGAAACTTCCCTCGGAGGGACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| 3UTR TCA 72 bp | TTCCAGGCCTCACTGTGCTGTCGGTTATCACTGACTTaGGGTCCTGAAAGCGTTTCCTCCACGCCTCAGCCC | + |
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Preference number: 3 (lower is better) Translates to: FQASLCCRLSLT*GPESVSSTPQP Trigger: GGGCTGAGGCGTGGAGGAAACGCTTTCAGGACCTCAAGTCAGTGATAACCGACAGCACAGTGAGGCCTGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| 3UTR CCA 72 bp | GTTAAGGTCTGGAACCTGACTCAGCCACTGAGGAAATaGCCCAAGCCAGCCCTAGTGTCTGAATGTAAAAGC | + |
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Preference number: 3 (lower is better) Translates to: VKVWNLTQPLRK*PKPALVSECKS Trigger: GCTTTTACATTCAGACACTAGGGCTGGCTTGGGCCATTTCCTCAGTGGCTGAGTCAGGTTCCAGACCTTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| 3UTR GCA 72 bp | TTCTTTAAGCTTAAAACGTGGACAACATCCCTGGGTTaGCACCCAATTCCCCAAAGCAGTAGGTTCTCCCCC | + |
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Preference number: 3 (lower is better) Translates to: FFKLKTWTTSLG*HPIPQSSRFSP Trigger: GGGGGAGAACCTACTGCTTTGGGGAATTGGGTGGCAACCCAGGGATGTTGTCCACGTTTTAAGCTTAAAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| 3UTR GCA 72 bp | TTATGGGCTAACTTTTTACCTGCTCTTTCTGCACTTTaGAAGAGCAGGAGCAACAATGGTGGGGTCGAAGAC | + |
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Preference number: 3 (lower is better) Translates to: LWANFLPALSAL*KSRSNNGGVED Trigger: GTCTTCGACCCCACCATTGTTGCTCCTGCTCTTGCAAAGTGCAGAAAGAGCAGGTAAAAAGTTAGCCCATAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| 3UTR CCA 72 bp | TGGAGTTCTTTAAGCTTAAAACGTGGACAACATCCCTaGGTTGCCACCCAATTCCCCAAAGCAGTAGGTTCT | + |
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Preference number: 3 (lower is better) Translates to: WSSLSLKRGQHP*VATQFPKAVGS Trigger: AGAACCTACTGCTTTGGGGAATTGGGTGGCAACCCAGGGATGTTGTCCACGTTTTAAGCTTAAAGAACTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| 3UTR CCA 72 bp | AGACCTACCTCCCTGCACACTCCACCTAACCTCATGTaGATAGCTAAGTTTAGCTATCCACCCATAGCTAAA | + |
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Preference number: 3 (lower is better) Translates to: RPTSLHTPPNLM*IAKFSYPPIAK Trigger: TTTAGCTATGGGTGGATAGCTAAACTTAGCTATCCACATGAGGTTAGGTGGAGTGTGCAGGGAGGTAGGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| 3UTR CCA 72 bp | TTAATTAAAGTCCAACAAGATCAGCCCACGTGCTTATaGGCTAACTTTTTACCTGCTCTTTCTGCACTTTGC | + |
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Preference number: 3 (lower is better) Translates to: LIKVQQDQPTCL*ANFLPALSALC Trigger: GCAAAGTGCAGAAAGAGCAGGTAAAAAGTTAGCCCATAAGCACGTGGGCTGATCTTGTTGGACTTTAATTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| 3UTR GCA 72 bp | ATACCATTAATTAAAGTCCAACAAGATCAGCCCACGTaGTTATGGGCTAACTTTTTACCTGCTCTTTCTGCA | + |
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Preference number: 3 (lower is better) Translates to: IPLIKVQQDQPT*LWANFLPALSA Trigger: TGCAGAAAGAGCAGGTAAAAAGTTAGCCCATAAGCACGTGGGCTGATCTTGTTGGACTTTAATTAATGGTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| CDS-3UTR CCA 90 bp | AGGAGCAACAATGGTGGGGTCGAAGACCTACCTCCCTGCACACTCCACCTAACCTGTCATAGCGAGGTGTaGCCTGGGGGAAGCGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: RSNNGGVEDLPPCTLHLTCHSEV*PGGSEG Trigger: CCCTTCGCTTCCCCCAGGCCACACCTCGCTATGACA...GGTTAGGTGGAGTGTGCAGGGAGGTAGGTCTTCGACCCCACCATTGTTGCTCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| CDS-3UTR GCA 90 bp | TTGATCCTAGCGGCCCCGCACCTGCGAGAGCCAACAGTCCCTCCGAGGGAAGTTTTCCAGGCCTCACTGTaGTGTCGGTTATCACTGACT | + |
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Preference number: 4 (lower is better) Translates to: LILAAPHLREPTVPPREVFQASL*CRLSLT Trigger: AGTCAGTGATAACCGACAGCACAGTGAGGCCTGGAA...AACTTCCCTCGGAGGGACTGTTGGCTCTCGCAGGTGCGGGGCCGCTAGGATCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| CDS-3UTR CCA 90 bp | GGTCCTGAAAGCGTTTCCTCCACGCCTCAGCCCCCTTCCCCCATTTGTCTGTTAGGCCAGGGGAGAAAATaGGACGCCCACAATTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: GPESVSSTPQPPSPICLLGQGRK*DAHNSR Trigger: CCTGGAATTGTGGGCGTCCCATTTTCTCCCCTGGCC...TAACAGACAAATGGGGGAAGGGGGCTGAGGCGTGGAGGAAACGCTTTCAGGACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| CDS-3UTR CCA 90 bp | CTCCACGCCTCAGCCCCCTTCCCCCATTTGTCTGTTAAGGTCTGGAACCTGACTTTCCGACATGAGGCCTaGACTCCTCTCTTGAGACCC | + |
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Preference number: 4 (lower is better) Translates to: LHASAPFPHLSVKVWNLTFRHEA*TPLLRP Trigger: GGGTCTCAAGAGAGGAGTCCAGGCCTCATGTCGGAA...AGTCAGGTTCCAGACCTTAACAGACAAATGGGGGAAGGGGGCTGAGGCGTGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| CDS-3UTR CCA 90 bp | TTTGCAAGAGCAGGAGCAACAATGGTGGGGTCGAAGACCTACCTCCCTGCACACCGTGGACAACATCCCTaGGTTGCCACCCAATTCCCC | + |
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Preference number: 4 (lower is better) Translates to: FARAGATMVGSKTYLPAHRGQHP*VATQFP Trigger: GGGGAATTGGGTGGCAACCCAGGGATGTTGTCCACG...GTGTGCAGGGAGGTAGGTCTTCGACCCCACCATTGTTGCTCCTGCTCTTGCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| CDS-3UTR CCA 90 bp | CAGTCCCTCCGAGGGAAGTTTCCAGGCCTCACTGTGCTGTCGGTTATCACTGACGAGCAGGAGCAACAATaGTGGGGTCGAAGACCTACC | + |
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Preference number: 4 (lower is better) Translates to: QSLRGKFPGLTVLSVITDEQEQQ*WGRRPT Trigger: GGTAGGTCTTCGACCCCACCATTGTTGCTCCTGCTC...GTCAGTGATAACCGACAGCACAGTGAGGCCTGGAAACTTCCCTCGGAGGGACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| 3UTR CAA 72 bp | AAGCGTTTCCTCCACGCCTCAGCCCCCTTCCCCCATTaGTCTGTTAAGGTCTGGAACCTGACTCAGCCACTG | + |
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Preference number: 4 (lower is better) Translates to: KRFLHASAPFPH*SVKVWNLTQPL Trigger: CAGTGGCTGAGTCAGGTTCCAGACCTTAACAGACAAATGGGGGAAGGGGGCTGAGGCGTGGAGGAAACGCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| CDS-3UTR GCA 90 bp | TTTGCAAGAGCAGGAGCAACAATGGTGGGGTCGAAGACCTACCTCCCTGCACACTTTGGGAGATTCTGCTaGAGCTGTTGTGGCTGCGGC | + |
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Preference number: 4 (lower is better) Translates to: FARAGATMVGSKTYLPAHFGRFC*SCCGCG Trigger: GCCGCAGCCACAACAGCTGCAGCAGAATCTCCCAAA...GTGTGCAGGGAGGTAGGTCTTCGACCCCACCATTGTTGCTCCTGCTCTTGCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| CDS-3UTR GCA 90 bp | TTTGCAAGAGCAGGAGCAACAATGGTGGGGTCGAAGACCTACCTCCCTGCACACGGGCATGGGGACGGCTaGACACTTGAATGTCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: FARAGATMVGSKTYLPAHGHGDG*TLECQH Trigger: ATGCTGACATTCAAGTGTGCAGCCGTCCCCATGCCC...GTGTGCAGGGAGGTAGGTCTTCGACCCCACCATTGTTGCTCCTGCTCTTGCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| CDS-3UTR GCA 90 bp | CTCCACGCCTCAGCCCCCTTCCCCCATTTGTCTGTTAAGGTCTGGAACCTGACTGAAGACCTACCTCCCTaGACACTCCACCTAACCTCA | + |
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Preference number: 4 (lower is better) Translates to: LHASAPFPHLSVKVWNLTEDLPP*TLHLTS Trigger: TGAGGTTAGGTGGAGTGTGCAGGGAGGTAGGTCTTC...AGTCAGGTTCCAGACCTTAACAGACAAATGGGGGAAGGGGGCTGAGGCGTGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| CDS-3UTR CCA 90 bp | CTCCGAGGGAAGTTTCCAGGCCTCACTGTGCTGTCGGTTATCACTGACTTGAGGTGGTTAACGATGGACTaGGCCTTCCTCCCAAGCGCT | + |
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Preference number: 4 (lower is better) Translates to: LRGKFPGLTVLSVITDLRWLTMD*AFLPSA Trigger: AGCGCTTGGGAGGAAGGCCCAGTCCATCGTTAACCA...CCTCAAGTCAGTGATAACCGACAGCACAGTGAGGCCTGGAAACTTCCCTCGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| CDS-3UTR CCA 90 bp | TTGATCCTAGCGGCCCCGCACCTGCGAGAGCCAACAGTCCCTCCGAGGGAAGTTCCTCCCCTTCAGCTTTaGAGTTTAAGGTGTGTGAAA | + |
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Preference number: 4 (lower is better) Translates to: LILAAPHLREPTVPPREVPPLQL*SLRCVK Trigger: TTTCACACACCTTAAACTCCAAAGCTGAAGGGGAGG...AACTTCCCTCGGAGGGACTGTTGGCTCTCGCAGGTGCGGGGCCGCTAGGATCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| CDS-3UTR GCA 90 bp | CCAATTCCCCAAAGCAGTAGGTTCTCCCCCACAGGTGTAGTGGTTAACGATGGACCAGGGTCCCGTTCTTaGTGTCATAGCGAGGTGTGG | + |
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Preference number: 4 (lower is better) Translates to: PIPQSSRFSPTGVVVNDGPGSRS*CHSEVW Trigger: CCACACCTCGCTATGACAGCAAGAACGGGACCCTGG...TCCATCGTTAACCACTACACCTGTGGGGGAGAACCTACTGCTTTGGGGAATTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| CDS-3UTR CCA 90 bp | CCAATTCCCCAAAGCAGTAGGTTCTCCCCCACAGGTGTAGTGGTTAACGATGGAAGACCCGGTTTCCCATaGCGCTCTGTCTCCAAGGGA | + |
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Preference number: 4 (lower is better) Translates to: PIPQSSRFSPTGVVVNDGRPGFP*RSVSKG Trigger: TCCCTTGGAGACAGAGCGCCATGGGAAACCGGGTCT...TCCATCGTTAACCACTACACCTGTGGGGGAGAACCTACTGCTTTGGGGAATTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| CDS-3UTR TCA 90 bp | CCAATTCCCCAAAGCAGTAGGTTCTCCCCCACAGGTGTAGTGGTTAACGATGGATGCTGTCTTCCGACATaGGGCCTGGACTCCTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: PIPQSSRFSPTGVVVNDGCCLPT*GLDSSL Trigger: AAGAGAGGAGTCCAGGCCTCATGTCGGAAGACAGCA...TCCATCGTTAACCACTACACCTGTGGGGGAGAACCTACTGCTTTGGGGAATTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| CDS-3UTR CCA 90 bp | GGTCCTGAAAGCGTTTCCTCCACGCCTCAGCCCCCTTCCCCCATTTGTCTGTTATGTCCTGTTGTTTCATaGCCCTTTGGGAGATTCTGC | + |
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Preference number: 4 (lower is better) Translates to: GPESVSSTPQPPSPICLLCPVVS*PFGRFC Trigger: GCAGAATCTCCCAAAGGGCCATGAAACAACAGGACA...TAACAGACAAATGGGGGAAGGGGGCTGAGGCGTGGAGGAAACGCTTTCAGGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| CDS-3UTR CCA 90 bp | CCCTTCCCCCATTTGTCTGTTAAGGTCTGGAACCTGACTCAGCCACTGAGGAAACAGGAGCAACAATGGTaGGGTCGAAGACCTACCTCC | + |
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Preference number: 4 (lower is better) Translates to: PFPHLSVKVWNLTQPLRKQEQQW*GRRPTS Trigger: GGAGGTAGGTCTTCGACCCCACCATTGTTGCTCCTG...TTTCCTCAGTGGCTGAGTCAGGTTCCAGACCTTAACAGACAAATGGGGGAAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| CDS-3UTR TCA 90 bp | CTCAGAATGCTTTTCCGGAGCACCTCCCCTTCAGCTTTGGAGTTTAAGGTGTGTCCTGGACTCCTCTCTTaGGACCCTTGCTGCTGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: LRMLFRSTSPSALEFKVCPGLLS*DPCCCN Trigger: GTTACAGCAGCAAGGGTCTCAAGAGAGGAGTCCAGG...ACACACCTTAAACTCCAAAGCTGAAGGGGAGGTGCTCCGGAAAAGCATTCTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| CDS-3UTR GCA 90 bp | CAGTCCCTCCGAGGGAAGTTTCCAGGCCTCACTGTGCTGTCGGTTATCACTGACGCCCAGCTGTTTTTATaGATCAAGAGGCTTGTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QSLRGKFPGLTVLSVITDAQLFL*IKRLVH Trigger: ATGCACAAGCCTCTTGATGCATAAAAACAGCTGGGC...GTCAGTGATAACCGACAGCACAGTGAGGCCTGGAAACTTCCCTCGGAGGGACTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| CDS-3UTR GCA 90 bp | CTCAGAATGCTTTTCCGGAGCACCTCCCCTTCAGCTTTGGAGTTTAAGGTGTGTTGCAGCTGTTGTGGCTaGGGCTTCAGTGTCCGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LRMLFRSTSPSALEFKVCCSCCG*GFSVRL Trigger: AAGACGGACACTGAAGCCGCAGCCACAACAGCTGCA...ACACACCTTAAACTCCAAAGCTGAAGGGGAGGTGCTCCGGAAAAGCATTCTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| CDS-3UTR GCA 90 bp | AAGGTCTGGAACCTGACTCAGCCACTGAGGAAATGGCCCAAGCCAGCCCTAGTGGTAGCGTTTTCTAAATaGACGTGTTTCACTTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: KVWNLTQPLRKWPKPALVVAFSK*TCFTSR Trigger: CCGGGAAGTGAAACACGTGCATTTAGAAAACGCTAC...CACTAGGGCTGGCTTGGGCCATTTCCTCAGTGGCTGAGTCAGGTTCCAGACCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| CDS-3UTR GCA 90 bp | TTTGCAAGAGCAGGAGCAACAATGGTGGGGTCGAAGACCTACCTCCCTGCACACTGTAAAAGCTCAGAATaGTTTTCCGGAGCACCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FARAGATMVGSKTYLPAHCKSSE*FSGAPP Trigger: GGGAGGTGCTCCGGAAAAGCATTCTGAGCTTTTACA...GTGTGCAGGGAGGTAGGTCTTCGACCCCACCATTGTTGCTCCTGCTCTTGCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| CDS-3UTR CCA 90 bp | GAGGTCCTGAAAGCGTTTCCTCCACGCCTCAGCCCCCTTCCCCCATTTGTCTGTTTTAAGCTTAAAACGTaGACAACATCCCTGGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: EVLKAFPPRLSPLPPFVCFKLKT*TTSLGC Trigger: GCAACCCAGGGATGTTGTCCACGTTTTAAGCTTAAA...ACAGACAAATGGGGGAAGGGGGCTGAGGCGTGGAGGAAACGCTTTCAGGACCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| CDS-3UTR CCA 90 bp | CTCCGAGGGAAGTTTCCAGGCCTCACTGTGCTGTCGGTTATCACTGACTTGAGGTTGTCTGTTAAGGTCTaGAACCTGACTCAGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LRGKFPGLTVLSVITDLRLSVKV*NLTQPL Trigger: CAGTGGCTGAGTCAGGTTCCAGACCTTAACAGACAA...CCTCAAGTCAGTGATAACCGACAGCACAGTGAGGCCTGGAAACTTCCCTCGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| CDS-3UTR GCA 90 bp | GTTAAGGTCTGGAACCTGACTCAGCCACTGAGGAAATGGCCCAAGCCAGCCCTAGCTCTTTCTGCACTTTaGAAGAGCAGGAGCAACAAT | + |
|
Preference number: 4 (lower is better) Translates to: VKVWNLTQPLRKWPKPALALSAL*KSRSNN Trigger: ATTGTTGCTCCTGCTCTTGCAAAGTGCAGAAAGAGC...TAGGGCTGGCTTGGGCCATTTCCTCAGTGGCTGAGTCAGGTTCCAGACCTTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| CDS-3UTR CCA 90 bp | AAAGTCCAACAAGATCAGCCCACGTGCTTATGGGCTAACTTTTTACCTGCTCTTCTGCTGCAGCTGTTGTaGCTGCGGCTTCAGTGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: KVQQDQPTCLWANFLPALLLQLL*LRLQCP Trigger: CGGACACTGAAGCCGCAGCCACAACAGCTGCAGCAG...AAGAGCAGGTAAAAAGTTAGCCCATAAGCACGTGGGCTGATCTTGTTGGACTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| CDS-3UTR CCA 90 bp | CCCACAATTCCAGGGGCTTTGGAGTTCTTTAAGCTTAAAACGTGGACAACATCCCAGCCACTGAGGAAATaGCCCAAGCCAGCCCTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PTIPGALEFFKLKTWTTSQPLRK*PKPALV Trigger: CACTAGGGCTGGCTTGGGCCATTTCCTCAGTGGCTG...GGATGTTGTCCACGTTTTAAGCTTAAAGAACTCCAAAGCCCCTGGAATTGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| CDS-3UTR TCA 90 bp | CCCACAATTCCAGGGGCTTTGGAGTTCTTTAAGCTTAAAACGTGGACAACATCCACTGACTTGAGGTCCTaGAAGCGTTTCCTCCACGCC | + |
|
Preference number: 4 (lower is better) Translates to: PTIPGALEFFKLKTWTTSTDLRS*KRFLHA Trigger: GGCGTGGAGGAAACGCTTTCAGGACCTCAAGTCAGT...GGATGTTGTCCACGTTTTAAGCTTAAAGAACTCCAAAGCCCCTGGAATTGTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| CDS-3UTR GCA 90 bp | TTGCAAGAGCAGGAGCAACAATGGTGGGGTCGAAGACCTACCTCCCTGCACACTCAAGATCAGCCCACGTaGTTATGGGCTAACTTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LQEQEQQWWGRRPTSLHTQDQPT*LWANFL Trigger: TAAAAAGTTAGCCCATAAGCACGTGGGCTGATCTTG...AGTGTGCAGGGAGGTAGGTCTTCGACCCCACCATTGTTGCTCCTGCTCTTGCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| CDS-3UTR CCA 90 bp | CCAGCCCTAGTGTCTGAATGTAAAAGCTCAGAATGCTTTTCCGGAGCACCTCCCCAGCCCACGTGCTTATaGGCTAACTTTTTACCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PALVSECKSSECFSGAPPQPTCL*ANFLPA Trigger: AGCAGGTAAAAAGTTAGCCCATAAGCACGTGGGCTG...GGGAGGTGCTCCGGAAAAGCATTCTGAGCTTTTACATTCAGACACTAGGGCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| CDS-3UTR TCA 90 bp | CTTTGGAGTTCTTTAAGCTTAAAACGTGGACAACATCCCTGGGTTGCCACCCAAGCTGTCGGTTATCACTaGCTTGAGGTCCTGAAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LWSSLSLKRGQHPWVATQAVGYH*LEVLKA Trigger: CGCTTTCAGGACCTCAAGTCAGTGATAACCGACAGC...TTGGGTGGCAACCCAGGGATGTTGTCCACGTTTTAAGCTTAAAGAACTCCAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| CDS-3UTR CCA 90 bp | TTTGCAAGAGCAGGAGCAACAATGGTGGGGTCGAAGACCTACCTCCCTGCACACAGTGTCCGTCTTGTTTaGCTTCCTGTTTTCTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FARAGATMVGSKTYLPAHSVRLV*LPVFFF Trigger: GAAAAAGAAAACAGGAAGCCAAACAAGACGGACACT...GTGTGCAGGGAGGTAGGTCTTCGACCCCACCATTGTTGCTCCTGCTCTTGCAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| CDS-3UTR GCA 90 bp | TTAAAGTCCAACAAGATCAGCCCACGTGCTTATGGGCTAACTTTTTACCTGCTCACAACATCCCTGGGTTaGCACCCAATTCCCCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LKSNKISPRAYGLTFYLLTTSLG*HPIPQS Trigger: GCTTTGGGGAATTGGGTGGCAACCCAGGGATGTTGT...GAGCAGGTAAAAAGTTAGCCCATAAGCACGTGGGCTGATCTTGTTGGACTTTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| CDS-3UTR TCA 90 bp | TTAAAGTCCAACAAGATCAGCCCACGTGCTTATGGGCTAACTTTTTACCTGCTCTTTCTTCTGGAAAGTTaGTGGGCAGCTCCAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LKSNKISPRAYGLTFYLLFLLES*WAAPAS Trigger: GGAAGCTGGAGCTGCCCATCAACTTTCCAGAAGAAA...GAGCAGGTAAAAAGTTAGCCCATAAGCACGTGGGCTGATCTTGTTGGACTTTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| CDS-3UTR TCA 90 bp | AAAGTCCAACAAGATCAGCCCACGTGCTTATGGGCTAACTTTTTACCTGCTCTTCGGTTATCACTGACTTaGGGTCCTGAAAGCGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KVQQDQPTCLWANFLPALRLSLT*GPESVS Trigger: GGAAACGCTTTCAGGACCTCAAGTCAGTGATAACCG...AAGAGCAGGTAAAAAGTTAGCCCATAAGCACGTGGGCTGATCTTGTTGGACTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| CDS-3UTR CCA 90 bp | AAAGTCCAACAAGATCAGCCCACGTGCTTATGGGCTAACTTTTTACCTGCTCTTTGTTTCATGGCCCTTTaGGAGATTCTGCTGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KVQQDQPTCLWANFLPALCFMAL*EILLQL Trigger: CAGCTGCAGCAGAATCTCCCAAAGGGCCATGAAACA...AAGAGCAGGTAAAAAGTTAGCCCATAAGCACGTGGGCTGATCTTGTTGGACTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| CDS-3UTR CCA 90 bp | CCAGCCCTAGTGTCTGAATGTAAAAGCTCAGAATGCTTTTCCGGAGCACCTCCCCCACCTAACCTCATGTaGATAGCTAAGTTTAGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: PALVSECKSSECFSGAPPPPNLM*IAKFSY Trigger: ATAGCTAAACTTAGCTATCCACATGAGGTTAGGTGG...GGGAGGTGCTCCGGAAAAGCATTCTGAGCTTTTACATTCAGACACTAGGGCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| CDS GCA 90 bp | TGGACTGGGCCTTCCTCCCAAGCGCTCACACCAGGGTCCCGTTCTTaGTGTCATAGCGAGGTGTGGCCTGGGGGAAGCGAAGGGTCGCAT | + |
|
Preference number: 5 (lower is better) Translates to: WTGPSSQALTPGSRS*CHSEVWPGGSEGSH Trigger: ATGCGACCCTTCGCTTCCCCCAGGCCACACCTCGCTATGACAGCAAGAACGGGACCCTGGTGTGAGCGCTTGGGAGGAAGGCCCAGTCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000278601.6 ENST00000527286.5 ENST00000529012.1 |
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| CDS GCA 90 bp | CGCCCAGCCACTTGGCTCTGTCTTCTAAGGCCTCCTGAAAGGAGGTaGTGCTCTGGTGTTGGAACAAGGAGGTACCAGGCAGAGGAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RPATWLCLLRPPERR*CSGVGTRRYQAEEG Trigger: ACCTTCCTCTGCCTGGTACCTCCTTGTTCCAACACCAGAGCAGCACCTCCTTTCAGGAGGCCTTAGAAGACAGAGCCAAGTGGCTGGGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527286.5 |
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| CDS GCA 90 bp | CTGTCTCCAAGGGAGCCCAGCTGTTTTTATGCATCAAGAGGCTTGTaGATTTCCGGGTTCCTGGTTGAGCTTTCCGCGGCAGCTCCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: LSPREPSCFYASRGL*ISGFLVELSAAAPG Trigger: TCCGGGAGCTGCCGCGGAAAGCTCAACCAGGAACCCGGAAATGCACAAGCCTCTTGATGCATAAAAACAGCTGGGCTCCCTTGGAGACAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000529342.5 |
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| CDS CCA 90 bp | TTGGAACAAGGAGGTACCAGGCAGAGGAAGGTGGCAGTGGGAGGCTaGCAGACAACTATCTCCAGGTCCTCTGATTTTCGGGGCCTCTAC | + |
|
Preference number: 5 (lower is better) Translates to: LEQGGTRQRKVAVGG*QTTISRSSDFRGLY Trigger: GTAGAGGCCCCGAAAATCAGAGGACCTGGAGATAGTTGTCTGCCAGCCTCCCACTGCCACCTTCCTCTGCCTGGTACCTCCTTGTTCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000527286.5 |
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| CDS-3UTR CAA 90 bp | TTGCAAGAGCAGGAGCAACAATGGTGGGGTCGAAGACCTACCTCCCTGCACACTGCCCCCTTCCCCCATTaGTCTGTTAAGGTCTGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: LQEQEQQWWGRRPTSLHTAPFPH*SVKVWN Trigger: GTTCCAGACCTTAACAGACAAATGGGGGAAGGGGGC...AGTGTGCAGGGAGGTAGGTCTTCGACCCCACCATTGTTGCTCCTGCTCTTGCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| CDS CCA 90 bp | CCAGCTGTTTTTATGCATCAAGAGGCTTGTGCATTTCCGGGTTCCTaGTTGAGCTTTCCGCGGCAGCTCCCGGAGTCTGTGTCAGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: PAVFMHQEACAFPGS*LSFPRQLPESVSVS Trigger: TGACACTGACACAGACTCCGGGAGCTGCCGCGGAAAGCTCAACCAGGAACCCGGAAATGCACAAGCCTCTTGATGCATAAAAACAGCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000529342.5 |
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| CDS-3UTR CAA 90 bp | CCCTTCCCCCATTTGTCTGTTAAGGTCTGGAACCTGACTCAGCCACTGAGGAAATTCTCAGGCCGTTTATaGATCCTAGCGGCCCCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: PFPHLSVKVWNLTQPLRKFSGRL*ILAAPH Trigger: GTGCGGGGCCGCTAGGATCAATAAACGGCCTGAGAA...TTTCCTCAGTGGCTGAGTCAGGTTCCAGACCTTAACAGACAAATGGGGGAAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| CDS-3UTR CAA 90 bp | GTTAAGGTCTGGAACCTGACTCAGCCACTGAGGAAATGGCCCAAGCCAGCCCTATTGTTTCATGGCCCTTaGGGAGATTCTGCTGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VKVWNLTQPLRKWPKPALLFHGP*GDSAAA Trigger: AGCTGCAGCAGAATCTCCCAAAGGGCCATGAAACAA...TAGGGCTGGCTTGGGCCATTTCCTCAGTGGCTGAGTCAGGTTCCAGACCTTAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| CDS-3UTR CAA 90 bp | GGTCCTGAAAGCGTTTCCTCCACGCCTCAGCCCCCTTCCCCCATTTGTCTGTTACATACGTATGTCCTGTaGTTTCATGGCCCTTTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GPESVSSTPQPPSPICLLHTYVL*FHGPLG Trigger: TCCCAAAGGGCCATGAAACAACAGGACATACGTATG...TAACAGACAAATGGGGGAAGGGGGCTGAGGCGTGGAGGAAACGCTTTCAGGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| CDS TCA 90 bp | CTGTTTTTATGCATCAAGAGGCTTGTGCATTTCCGGGTTCCTGGTTaGGCTTTCCGCGGCAGCTCCCGGAGTCTGTGTCAGTGTCAGATT | + |
|
Preference number: 5 (lower is better) Translates to: LFLCIKRLVHFRVPG*AFRGSSRSLCQCQI Trigger: AATCTGACACTGACACAGACTCCGGGAGCTGCCGCGGAAAGCTCAACCAGGAACCCGGAAATGCACAAGCCTCTTGATGCATAAAAACAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000529342.5 |
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| CDS CCA 90 bp | CAGCTCCCGGAGTCTGTGTCAGTGTCAGATTTCAACCTAGCAGGTTaGACTTTTGAAGCCACCTGCTGGAATGATTCCCAGGTGACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: QLPESVSVSDFNLAG*TFEATCWNDSQVTV Trigger: CACAGTCACCTGGGAATCATTCCAGCAGGTGGCTTCAAAAGTCCAACCTGCTAGGTTGAAATCTGACACTGACACAGACTCCGGGAGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000529342.5 |
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| CDS-3UTR CAA 90 bp | TCTGTTAAGGTCTGGAACCTGACTCAGCCACTGAGGAAATGGCCCAAGCCAGCCACCTCCCCTTCAGCTTaGGAGTTTAAGGTGTGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: SVKVWNLTQPLRKWPKPATSPSA*EFKVCE Trigger: TTCACACACCTTAAACTCCAAAGCTGAAGGGGAGGT...GGCTGGCTTGGGCCATTTCCTCAGTGGCTGAGTCAGGTTCCAGACCTTAACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| CDS CCA 90 bp | TCCTGTTGTTTCATGGCCCTTTGGGAGATTCTGCTGCAGCTGTTGTaGCTGCGGCTTCAGTGTCCGTCTTGTTTGGCTTCCTGTTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SCCFMALWEILLQLL*LRLQCPSCLASCFL Trigger: AAGAAAACAGGAAGCCAAACAAGACGGACACTGAAGCCGCAGCCACAACAGCTGCAGCAGAATCTCCCAAAGGGCCATGAAACAACAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000278601.6 ENST00000527286.5 ENST00000529012.1 |
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| CDS TCA 90 bp | TGCACACTTGAATGTCAGCATAATGTAAGTTGCTGTCTTCCGACATaGGGCCTGGACTCCTCTCTTGAGACCCTTGCTGCTGTAACACCC | + |
|
Preference number: 5 (lower is better) Translates to: CTLECQHNVSCCLPT*GLDSSLETLAAVTP Trigger: GGGTGTTACAGCAGCAAGGGTCTCAAGAGAGGAGTCCAGGCCTCATGTCGGAAGACAGCAACTTACATTATGCTGACATTCAAGTGTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000278601.6 ENST00000527286.5 ENST00000529012.1 |
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| CDS GCA 90 bp | GTTGTTTCATGGCCCTTTGGGAGATTCTGCTGCAGCTGTTGTGGCTaGGGCTTCAGTGTCCGTCTTGTTTGGCTTCCTGTTTTCTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VVSWPFGRFCCSCCG*GFSVRLVWLPVFFF Trigger: GAAAAAGAAAACAGGAAGCCAAACAAGACGGACACTGAAGCCGCAGCCACAACAGCTGCAGCAGAATCTCCCAAAGGGCCATGAAACAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000278601.6 ENST00000527286.5 ENST00000529012.1 |
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| CDS-3UTR CAA 90 bp | TCTTTAAGCTTAAAACGTGGACAACATCCCTGGGTTGCCACCCAATTCCCCAAAGACAACATCCCTGGGTaGCCACCCAATTCCCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SLSLKRGQHPWVATQFPKDNIPG*PPNSPK Trigger: CTTTGGGGAATTGGGTGGCAACCCAGGGATGTTGTC...TTTGGGGAATTGGGTGGCAACCCAGGGATGTTGTCCACGTTTTAAGCTTAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| CDS TCA 90 bp | GACTGTGTTCCCAGCCAAAGGGTAGAACAACACACGGGCTCCAGGTaGGAGCTATCTCAACTTCAGGATTTGAAGCGTCTTTTGATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: DCVPSQRVEQHTGSR*ELSQLQDLKRLLMK Trigger: CTTCATCAAAAGACGCTTCAAATCCTGAAGTTGAGATAGCTCTCACCTGGAGCCCGTGTGTTGTTCTACCCTTTGGCTGGGAACACAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000529342.5 |
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| CDS GCA 90 bp | CGTTTTCTAAATGCACGTGTTTCACTTCCCGGGCATGGGGACGGCTaGACACTTGAATGTCAGCATAATGTAAGTTGCTGTCTTCCGACA | + |
|
Preference number: 5 (lower is better) Translates to: RFLNARVSLPGHGDG*TLECQHNVSCCLPT Trigger: TGTCGGAAGACAGCAACTTACATTATGCTGACATTCAAGTGTGCAGCCGTCCCCATGCCCGGGAAGTGAAACACGTGCATTTAGAAAACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000278601.6 ENST00000527286.5 ENST00000529012.1 |
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| CDS-3UTR CAA 90 bp | GTTAAGGTCTGGAACCTGACTCAGCCACTGAGGAAATGGCCCAAGCCAGCCCTAACAATTCCAGGGGCTTaGGAGTTCTTTAAGCTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: VKVWNLTQPLRKWPKPALTIPGA*EFFKLK Trigger: TTTAAGCTTAAAGAACTCCAAAGCCCCTGGAATTGT...TAGGGCTGGCTTGGGCCATTTCCTCAGTGGCTGAGTCAGGTTCCAGACCTTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| CDS-3UTR CAA 90 bp | CGGAGCACCTCCCCTTCAGCTTTGGAGTTTAAGGTGTGTGAAAAAGGATACCATTTTTCTTCTGGAAAGTaGATGGGCAGCTCCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RSTSPSALEFKVCEKGYHFSSGK*MGSSSF Trigger: GAAGCTGGAGCTGCCCATCAACTTTCCAGAAGAAAA...ATGGTATCCTTTTTCACACACCTTAAACTCCAAAGCTGAAGGGGAGGTGCTCCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000278601.6 |
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| CDS-3UTR CAA 90 bp | CCAGCCCTAGTGTCTGAATGTAAAAGCTCAGAATGCTTTTCCGGAGCACCTCCCCAGTGTCCGTCTTGTTaGGCTTCCTGTTTTCTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: PALVSECKSSECFSGAPPQCPSC*ASCFLF Trigger: AAAAAGAAAACAGGAAGCCAAACAAGACGGACACTG...GGGAGGTGCTCCGGAAAAGCATTCTGAGCTTTTACATTCAGACACTAGGGCTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000278601.6 |
||
| CDS-3UTR CAA 90 bp | CCCACGTGCTTATGGGCTAACTTTTTACCTGCTCTTTCTGCACTTTGCAAGAGCGCTTCAGTGTCCGTCTaGTTTGGCTTCCTGTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PTCLWANFLPALSALCKSASVSV*FGFLFS Trigger: AGAAAACAGGAAGCCAAACAAGACGGACACTGAAGC...GCTCTTGCAAAGTGCAGAAAGAGCAGGTAAAAAGTTAGCCCATAAGCACGTGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000278601.6 |
||
| CDS-3UTR CAA 90 bp | AACCTCATGTGGATAGCTAAGTTTAGCTATCCACCCATAGCTAAACCAACTATTATTCTGCTGCAGCTGTaGTGGCTGCGGCTTCAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: NLMWIAKFSYPPIAKPTIILLQL*WLRLQC Trigger: ACACTGAAGCCGCAGCCACAACAGCTGCAGCAGAAT...AATAGTTGGTTTAGCTATGGGTGGATAGCTAAACTTAGCTATCCACATGAGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000278601.6 |
||
| CDS GCA 72 bp | CCTTCCTCCCAAGCGCTCACACCAGGGTCCCGTTCTTaGTGTCATAGCGAGGTGTGGCCTGGGGGAAGCGAA | + |
|
Preference number: 6 (lower is better) Translates to: PSSQALTPGSRS*CHSEVWPGGSE Trigger: TTCGCTTCCCCCAGGCCACACCTCGCTATGACAGCAAGAACGGGACCCTGGTGTGAGCGCTTGGGAGGAAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000278601.6 ENST00000527286.5 ENST00000529012.1 |
||
| CDS CCA 72 bp | AGCTCCAGCTTCCTCCGCAGCAGACCCGGTTTCCCATaGCGCTCTGTCTCCAAGGGAGCCCAGCTGTTTTTA | + |
|
Preference number: 6 (lower is better) Translates to: SSSFLRSRPGFP*RSVSKGAQLFL Trigger: TAAAAACAGCTGGGCTCCCTTGGAGACAGAGCGCCATGGGAAACCGGGTCTGCTGCGGAGGAAGCTGGAGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000278601.6 ENST00000529342.5 |
||
| CDS TCA 72 bp | TGCATCAAGAGGCTTGTGCATTTCCGGGTTCCTGGTTaGGCTTTCCGCGGCAGCTCCCGGAGTCTGTGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: CIKRLVHFRVPG*AFRGSSRSLCQ Trigger: CTGACACAGACTCCGGGAGCTGCCGCGGAAAGCTCAACCAGGAACCCGGAAATGCACAAGCCTCTTGATGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000529342.5 |
||
| CDS TCA 72 bp | GCGCCCAGCCACTTGGCTCTGTCTTCTAAGGCCTCCTaGAAGGAGGTGCTGCTCTGGTGTTGGAACAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: APSHLALSSKAS*KEVLLWCWNKE Trigger: CTCCTTGTTCCAACACCAGAGCAGCACCTCCTTTCAGGAGGCCTTAGAAGACAGAGCCAAGTGGCTGGGCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527286.5 |
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| CDS CAA 90 bp | GCTCTGTCTCCAAGGGAGCCCAGCTGTTTTTATGCATCAAGAGGCTaGTGCATTTCCGGGTTCCTGGTTGAGCTTTCCGCGGCAGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: ALSPREPSCFYASRG*CISGFLVELSAAAP Trigger: GGGAGCTGCCGCGGAAAGCTCAACCAGGAACCCGGAAATGCACAAGCCTCTTGATGCATAAAAACAGCTGGGCTCCCTTGGAGACAGAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000529342.5 |
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| CDS GCA 72 bp | TGGCCCTTTGGGAGATTCTGCTGCAGCTGTTGTGGCTaGGGCTTCAGTGTCCGTCTTGTTTGGCTTCCTGTT | + |
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Preference number: 6 (lower is better) Translates to: WPFGRFCCSCCG*GFSVRLVWLPV Trigger: AACAGGAAGCCAAACAAGACGGACACTGAAGCCGCAGCCACAACAGCTGCAGCAGAATCTCCCAAAGGGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000278601.6 ENST00000527286.5 ENST00000529012.1 |
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| CDS CCA 72 bp | TTTATGCATCAAGAGGCTTGTGCATTTCCGGGTTCCTaGTTGAGCTTTCCGCGGCAGCTCCCGGAGTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: FMHQEACAFPGS*LSFPRQLPESV Trigger: CACAGACTCCGGGAGCTGCCGCGGAAAGCTCAACCAGGAACCCGGAAATGCACAAGCCTCTTGATGCATAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000529342.5 |
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| CDS GCA 72 bp | TGTCCTGTTGTTTCATGGCCCTTTGGGAGATTCTGCTaGAGCTGTTGTGGCTGCGGCTTCAGTGTCCGTCTT | + |
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Preference number: 6 (lower is better) Translates to: CPVVSWPFGRFC*SCCGCGFSVRL Trigger: AAGACGGACACTGAAGCCGCAGCCACAACAGCTGCAGCAGAATCTCCCAAAGGGCCATGAAACAACAGGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000278601.6 ENST00000527286.5 ENST00000529012.1 |
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| CDS GCA 72 bp | AAGCGAAGGGTCGCATACTCTGTAGCGTTTTCTAAATaGACGTGTTTCACTTCCCGGGCATGGGGACGGCTG | + |
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Preference number: 6 (lower is better) Translates to: KRRVAYSVAFSK*TCFTSRAWGRL Trigger: CAGCCGTCCCCATGCCCGGGAAGTGAAACACGTGCATTTAGAAAACGCTACAGAGTATGCGACCCTTCGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000278601.6 ENST00000527286.5 ENST00000529012.1 |
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| CDS GCA 72 bp | GGCAGCTCCTGTAATAGGAAAAACAGATCACCCATGTaGAAGAGCCCTGGCCTCTGCCTTCCCTCCATCATC | + |
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Preference number: 6 (lower is better) Translates to: GSSCNRKNRSPM*KSPGLCLPSII Trigger: GATGATGGAGGGAAGGCAGAGGCCAGGGCTCTTGCACATGGGTGATCTGTTTTTCCTATTACAGGAGCTGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000529012.1 |
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| CDS GCA 72 bp | AGGGAGCCCAGCTGTTTTTATGCATCAAGAGGCTTGTaGATTTCCGGGTTCCTGGTTGAGCTTTCCGCGGCA | + |
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Preference number: 6 (lower is better) Translates to: REPSCFYASRGL*ISGFLVELSAA Trigger: TGCCGCGGAAAGCTCAACCAGGAACCCGGAAATGCACAAGCCTCTTGATGCATAAAAACAGCTGGGCTCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000529342.5 |
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| CDS GCA 72 bp | ACTTGGCTCTGTCTTCTAAGGCCTCCTGAAAGGAGGTaGTGCTCTGGTGTTGGAACAAGGAGGTACCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: TWLCLLRPPERR*CSGVGTRRYQA Trigger: TGCCTGGTACCTCCTTGTTCCAACACCAGAGCAGCACCTCCTTTCAGGAGGCCTTAGAAGACAGAGCCAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527286.5 |
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| CDS CAA 90 bp | GCTGTTTTTATGCATCAAGAGGCTTGTGCATTTCCGGGTTCCTGGTaGAGCTTTCCGCGGCAGCTCCCGGAGTCTGTGTCAGTGTCAGAT | + |
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Preference number: 6 (lower is better) Translates to: AVFMHQEACAFPGSW*SFPRQLPESVSVSD Trigger: ATCTGACACTGACACAGACTCCGGGAGCTGCCGCGGAAAGCTCAACCAGGAACCCGGAAATGCACAAGCCTCTTGATGCATAAAAACAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000529342.5 |
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| CDS TCA 72 bp | TTGCTGTCTTCCGACATGAGGCCTGGACTCCTCTCTTaGGACCCTTGCTGCTGTAACACCCGTTCATACGTA | + |
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Preference number: 6 (lower is better) Translates to: LLSSDMRPGLLS*DPCCCNTRSYV Trigger: TACGTATGAACGGGTGTTACAGCAGCAAGGGTCTCAAGAGAGGAGTCCAGGCCTCATGTCGGAAGACAGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000278601.6 ENST00000527286.5 ENST00000529012.1 |
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| CDS GCA 72 bp | GATTTCAACCTAGCAGGTTGGACTTTTGAAGCCACCTaGTGGAATGATTCCCAGGTGACTGTGTTCCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: DFNLAGWTFEAT*WNDSQVTVFPA Trigger: GGCTGGGAACACAGTCACCTGGGAATCATTCCAGCAGGTGGCTTCAAAAGTCCAACCTGCTAGGTTGAAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000529342.5 |
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| CDS TCA 72 bp | GAATGTCAGCATAATGTAAGTTGCTGTCTTCCGACATaGGGCCTGGACTCCTCTCTTGAGACCCTTGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: ECQHNVSCCLPT*GLDSSLETLAA Trigger: AGCAGCAAGGGTCTCAAGAGAGGAGTCCAGGCCTCATGTCGGAAGACAGCAACTTACATTATGCTGACATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000278601.6 ENST00000527286.5 ENST00000529012.1 |
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| CDS GCA 72 bp | AATGCACGTGTTTCACTTCCCGGGCATGGGGACGGCTaGACACTTGAATGTCAGCATAATGTAAGTTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: NARVSLPGHGDG*TLECQHNVSCC Trigger: ACAGCAACTTACATTATGCTGACATTCAAGTGTGCAGCCGTCCCCATGCCCGGGAAGTGAAACACGTGCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000278601.6 ENST00000527286.5 ENST00000529012.1 |
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| CDS CCA 72 bp | TTCAACCTAGCAGGTTGGACTTTTGAAGCCACCTGCTaGAATGATTCCCAGGTGACTGTGTTCCCAGCCAAA | + |
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Preference number: 6 (lower is better) Translates to: FNLAGWTFEATC*NDSQVTVFPAK Trigger: TTTGGCTGGGAACACAGTCACCTGGGAATCATTCCAGCAGGTGGCTTCAAAAGTCCAACCTGCTAGGTTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000529342.5 |
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| CDS CAA 72 bp | CTTGCTGCTGTAACACCCGTTCATACGTATGTCCTGTaGTTTCATGGCCCTTTGGGAGATTCTGCTGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: LAAVTPVHTYVL*FHGPLGDSAAA Trigger: AGCTGCAGCAGAATCTCCCAAAGGGCCATGAAACAACAGGACATACGTATGAACGGGTGTTACAGCAGCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000278601.6 ENST00000527286.5 ENST00000529012.1 |
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| CDS CCA 72 bp | GAGTCTGTGTCAGTGTCAGATTTCAACCTAGCAGGTTaGACTTTTGAAGCCACCTGCTGGAATGATTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: ESVSVSDFNLAG*TFEATCWNDSQ Trigger: CTGGGAATCATTCCAGCAGGTGGCTTCAAAAGTCCAACCTGCTAGGTTGAAATCTGACACTGACACAGACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000529342.5 |
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| CDS TCA 72 bp | TCAAGCAGTAGAAAATATGGGCTCTACGAGAATCTGTaGAACCCATCATTCTTGTGTTCAGTTCTCTCACCC | + |
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Preference number: 6 (lower is better) Translates to: SSSRKYGLYENL*NPSFLCSVLSP Trigger: GGGTGAGAGAACTGAACACAAGAATGATGGGTTTCACAGATTCTCGTAGAGCCCATATTTTCTACTGCTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000529342.5 |
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