RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C10ORF67 (Homo sapiens)

Ensembl gene IDs: ENSG00000179133

Ensembl transcript IDs: ENST00000323327.5, ENST00000376501.7, ENST00000636213.3, ENST00000649478.1, ENST00000673651.1

Found 594 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCTGTGCCACCCTCAGTGCCCCCTTGGCCTCCCTCCCATGCTTGTTaGCACCCAAACTCTGGAGGGGGCCAAGGCAGCAGAGGGCTGGTG +
Preference number: 1 (lower is better)
Translates to: AVPPSVPPWPPSHAC*HPNSGGGQGSRGLV
Trigger: CACCAGCCCTCTGCTGCCTTGGCCCCCTCCAGAGTTTGGGTGCCAACAAGCATGGGAGGGAGGCCAAGGGGGCACTGAGGGTGGCACAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR GCA 90 bp GCGAGGCCACTCTTTCTGAGGCCCCGTCTGCGCAGCCCAGGCTTCTaGTGGGTTAATCAACAGTCTCTGCGGGGCTGCTCTGGCGCATGG +
Preference number: 1 (lower is better)
Translates to: ARPLFLRPRLRSPGF*WVNQQSLRGCSGAW
Trigger: CCATGCGCCAGAGCAGCCCCGCAGAGACTGTTGATTAACCCAGCAGAAGCCTGGGCTGCGCAGACGGGGCCTCAGAAAGAGTGGCCTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376501.7
3UTR CCA 90 bp GGGTCTGCAGCCATGGCTGGGCAGCTGCAGCTGCCTCTAGGAGCGTaGAGCTCCCCCATCACCAACTCAGAAGGTGAGCACCACTCCTGC +
Preference number: 1 (lower is better)
Translates to: GSAAMAGQLQLPLGA*SSPITNSEGEHHSC
Trigger: GCAGGAGTGGTGCTCACCTTCTGAGTTGGTGATGGGGGAGCTCCACGCTCCTAGAGGCAGCTGCAGCTGCCCAGCCATGGCTGCAGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR CCA 90 bp AGGCCACTCTTTCTGAGGCCCCGTCTGCGCAGCCCAGGCTTCTGCTaGGTTAATCAACAGTCTCTGCGGGGCTGCTCTGGCGCATGGAGG +
Preference number: 1 (lower is better)
Translates to: RPLFLRPRLRSPGFC*VNQQSLRGCSGAWR
Trigger: CCTCCATGCGCCAGAGCAGCCCCGCAGAGACTGTTGATTAACCCAGCAGAAGCCTGGGCTGCGCAGACGGGGCCTCAGAAAGAGTGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376501.7
3UTR CCA 90 bp TGCGCCCCGCTCACCCAGCACCAGCCAGGGCTTTCCTTAAAGGCGTaGAAAGGAGCGCGCACAAGGCGCGCATTGAGGTCTATTCGAGCG +
Preference number: 1 (lower is better)
Translates to: CAPLTQHQPGLSLKA*KGARTRRALRSIRA
Trigger: CGCTCGAATAGACCTCAATGCGCGCCTTGTGCGCGCTCCTTTCCACGCCTTTAAGGAAAGCCCTGGCTGGTGCTGGGTGAGCGGGGCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR TCA 90 bp TTCCGAGGGAGGCACCTTACACCAGGACGGCGAGGCCACTCTTTCTaGGGCCCCGTCTGCGCAGCCCAGGCTTCTGCTGGGTTAATCAAC +
Preference number: 1 (lower is better)
Translates to: FRGRHLTPGRRGHSF*GPVCAAQASAGLIN
Trigger: GTTGATTAACCCAGCAGAAGCCTGGGCTGCGCAGACGGGGCCTCAGAAAGAGTGGCCTCGCCGTCCTGGTGTAAGGTGCCTCCCTCGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376501.7
3UTR CCA 90 bp CTTGTTGGCACCCAAACTCTGGAGGGGGCCAAGGCAGCAGAGGGCTaGTGTGTCAGCACCATCCCAAGCACACACACACCTGGCTGGGTC +
Preference number: 1 (lower is better)
Translates to: LVGTQTLEGAKAAEG*CVSTIPSTHTPGWV
Trigger: GACCCAGCCAGGTGTGTGTGTGCTTGGGATGGTGCTGACACACCAGCCCTCTGCTGCCTTGGCCCCCTCCAGAGTTTGGGTGCCAACAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR CCA 90 bp AGTCTGTGGAACTGGCAGCCTGGCCCCCAGGCTTCAGGCCACCCCTaGGTTGAAGGTGGAGCTTCACCAGCGACACATCCCTTTCCACTC +
Preference number: 1 (lower is better)
Translates to: SLWNWQPGPQASGHP*VEGGASPATHPFPL
Trigger: GAGTGGAAAGGGATGTGTCGCTGGTGAAGCTCCACCTTCAACCCAGGGGTGGCCTGAAGCCTGGGGGCCAGGCTGCCAGTTCCACAGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR CCA 90 bp ACATCCCTTTCCACTCGGGAGCCTGTCGCTTCCTGCTGCTGTTCATaGTGCCCAGGCTGTTCATGCCAAGGGACACCTGCAGGCCTGTGC +
Preference number: 1 (lower is better)
Translates to: TSLSTREPVASCCCS*CPGCSCQGTPAGLC
Trigger: GCACAGGCCTGCAGGTGTCCCTTGGCATGAACAGCCTGGGCACCATGAACAGCAGCAGGAAGCGACAGGCTCCCGAGTGGAAAGGGATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR TCA 90 bp GCTGCCTCTAGGAGCGTGGAGCTCCCCCATCACCAACTCAGAAGGTaGGCACCACTCCTGCTTGTTCCTGGCTCCTGCCAGCTTAGTAGA +
Preference number: 1 (lower is better)
Translates to: AASRSVELPHHQLRR*APLLLVPGSCQLSR
Trigger: TCTACTAAGCTGGCAGGAGCCAGGAACAAGCAGGAGTGGTGCTCACCTTCTGAGTTGGTGATGGGGGAGCTCCACGCTCCTAGAGGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR GCA 90 bp CACACCTGGCTGGGTCATAACAGCGCCTGGGCTTGGCCACAACTTTaGTTCAAAATCAGAGTGGGTGCCAGGAGTGAGGAGAGGCCAGGC +
Preference number: 1 (lower is better)
Translates to: HTWLGHNSAWAWPQL*FKIRVGARSEERPG
Trigger: GCCTGGCCTCTCCTCACTCCTGGCACCCACTCTGATTTTGAAGCAAAGTTGTGGCCAAGCCCAGGCGCTGTTATGACCCAGCCAGGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR CCA 90 bp ATAACAGCGCCTGGGCTTGGCCACAACTTTGCTTCAAAATCAGAGTaGGTGCCAGGAGTGAGGAGAGGCCAGGCAGCAGGAGTAGGCACT +
Preference number: 1 (lower is better)
Translates to: ITAPGLGHNFASKSE*VPGVRRGQAAGVGT
Trigger: AGTGCCTACTCCTGCTGCCTGGCCTCTCCTCACTCCTGGCACCCACTCTGATTTTGAAGCAAAGTTGTGGCCAAGCCCAGGCGCTGTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR CCA 90 bp CCCAAGCACACACACACCTGGCTGGGTCATAACAGCGCCTGGGCTTaGCCACAACTTTGCTTCAAAATCAGAGTGGGTGCCAGGAGTGAG +
Preference number: 1 (lower is better)
Translates to: PKHTHTWLGHNSAWA*PQLCFKIRVGARSE
Trigger: CTCACTCCTGGCACCCACTCTGATTTTGAAGCAAAGTTGTGGCCAAGCCCAGGCGCTGTTATGACCCAGCCAGGTGTGTGTGTGCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR CCA 90 bp CACCATCCCAAGCACACACACACCTGGCTGGGTCATAACAGCGCCTaGGCTTGGCCACAACTTTGCTTCAAAATCAGAGTGGGTGCCAGG +
Preference number: 1 (lower is better)
Translates to: HHPKHTHTWLGHNSA*AWPQLCFKIRVGAR
Trigger: CCTGGCACCCACTCTGATTTTGAAGCAAAGTTGTGGCCAAGCCCAGGCGCTGTTATGACCCAGCCAGGTGTGTGTGTGCTTGGGATGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR CCA 90 bp CAGCTGGAGTCATCTGGACGCTTCTCCACTCATATTTTTGACTCCTaGGCTGGGGTGACTCAAAGGCTGGGCTCAGATGAGCCTGGAGAC +
Preference number: 1 (lower is better)
Translates to: QLESSGRFSTHIFDS*AGVTQRLGSDEPGD
Trigger: GTCTCCAGGCTCATCTGAGCCCAGCCTTTGAGTCACCCCAGCCCAGGAGTCAAAAATATGAGTGGAGAAGCGTCCAGATGACTCCAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR TCA 90 bp AGAGGCCAGAGGCAGGGCAAGTCCAGGGTTACTTTCATGGCTCCATaGCATTACCAAGGACCCCTCTGCTTCTTATCTTTCCACCTTGCT +
Preference number: 1 (lower is better)
Translates to: RGQRQGKSRVTFMAP*HYQGPLCFLSFHLA
Trigger: AGCAAGGTGGAAAGATAAGAAGCAGAGGGGTCCTTGGTAATGTCATGGAGCCATGAAAGTAACCCTGGACTTGCCCTGCCTCTGGCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR GCA 90 bp CTCAGCTCCCAGCTAAGAGAAGACCCACAGTGGGTAGCTCCTTTCTaGAGGCAGGTCATCCTGATATCTGTTCAGCTCTTAGCTGAGAGA +
Preference number: 1 (lower is better)
Translates to: LSSQLREDPQWVAPF*RQVILISVQLLAER
Trigger: TCTCTCAGCTAAGAGCTGAACAGATATCAGGATGACCTGCCTGCAGAAAGGAGCTACCCACTGTGGGTCTTCTCTTAGCTGGGAGCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673651.1
3UTR TCA 90 bp TTGGTGGAAATGGCTGGCAGCCAGTTCTGGGAAAGATTCCAGACCTaGCTCCGATTAACCCTCTCTGGTGAAACTCTGCTGGAAACCAAC +
Preference number: 1 (lower is better)
Translates to: LVEMAGSQFWERFQT*LRLTLSGETLLETN
Trigger: GTTGGTTTCCAGCAGAGTTTCACCAGAGAGGGTTAATCGGAGTCAGGTCTGGAATCTTTCCCAGAACTGGCTGCCAGCCATTTCCACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR TCA 90 bp CGGCTAGGTGCCCTGTGCCGGGGTAAGATAAGAATGAATCTTGCTTaGGGAAATGTACGATCTCCCTGTAGTCTTCATGACCTACCTTCA +
Preference number: 1 (lower is better)
Translates to: RLGALCRGKIRMNLA*GNVRSPCSLHDLPS
Trigger: TGAAGGTAGGTCATGAAGACTACAGGGAGATCGTACATTTCCTCAAGCAAGATTCATTCTTATCTTACCCCGGCACAGGGCACCTAGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR TCA 90 bp AGGGCAACACTCCTTTGGAGACAGCGGCATATAGTGCATAGTAGATaGAGCTCGAATAACGCTCCACAGCGCTATACCATCCCATGTACT +
Preference number: 1 (lower is better)
Translates to: RATLLWRQRHIVHSR*SSNNAPQRYTIPCT
Trigger: AGTACATGGGATGGTATAGCGCTGTGGAGCGTTATTCGAGCTTCATCTACTATGCACTATATGCCGCTGTCTCCAAAGGAGTGTTGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR CCA 90 bp TTGTTCTTAGAACTTAAGAATAAAATCCTCTCCAGCTCTGGACCATaGTTGGGCCTGGGACATCCGGTGGCTCAGAGCAGACATGAGATG +
Preference number: 1 (lower is better)
Translates to: LFLELKNKILSSSGP*LGLGHPVAQSRHEM
Trigger: CATCTCATGTCTGCTCTGAGCCACCGGATGTCCCAGGCCCAACCATGGTCCAGAGCTGGAGAGGATTTTATTCTTAAGTTCTAAGAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649478.1
3UTR CCA 90 bp TCCTCTGTAAGACCTGTGACCTCACATAAAAAGAGTCTACATGGCTaGCAGCTGGAGTCATCTGGACGCTTCTCCACTCATATTTTTGAC +
Preference number: 1 (lower is better)
Translates to: SSVRPVTSHKKSLHG*QLESSGRFSTHIFD
Trigger: GTCAAAAATATGAGTGGAGAAGCGTCCAGATGACTCCAGCTGCCAGCCATGTAGACTCTTTTTATGTGAGGTCACAGGTCTTACAGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR CCA 90 bp TTACGCATGGAAGAAAAGCAAACCCGCCTTTTGGTAAACGGTGTCTaGCATTCCAGCAGAATCTTGGTTTGCATCCTTACCAGGAAGCAA +
Preference number: 1 (lower is better)
Translates to: LRMEEKQTRLLVNGV*HSSRILVCILTRKQ
Trigger: TTGCTTCCTGGTAAGGATGCAAACCAAGATTCTGCTGGAATGCCAGACACCGTTTACCAAAAGGCGGGTTTGCTTTTCTTCCATGCGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR CCA 90 bp ATTTCATTTCCTCTGTTTCTTGTAGGGTTGATTGGTTGGTGGAAATaGCTGGCAGCCAGTTCTGGGAAAGATTCCAGACCTGACTCCGAT +
Preference number: 1 (lower is better)
Translates to: ISFPLFLVGLIGWWK*LAASSGKDSRPDSD
Trigger: ATCGGAGTCAGGTCTGGAATCTTTCCCAGAACTGGCTGCCAGCCATTTCCACCAACCAATCAACCCTACAAGAAACAGAGGAAATGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR TCA 90 bp CCGACAACTTCCCTTTTGGTGAAAGTTGAAGGGCTGCCTGATCACTaGCTACATCCACATGCTTACCGTCTATTGAAGATGTACAATGAC +
Preference number: 1 (lower is better)
Translates to: PTTSLLVKVEGLPDH*LHPHAYRLLKMYND
Trigger: GTCATTGTACATCTTCAATAGACGGTAAGCATGTGGATGTAGTCAGTGATCAGGCAGCCCTTCAACTTTCACCAAAAGGGAAGTTGTCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376501.7
3UTR CCA 90 bp ATAAAGCTCCCCCTCTGTAAGTGGACTTTAGATTCAGGTGAACCTTaGTTCATGTACCATCTTTACCATCTACTACGTTTGCCCATGAGG +
Preference number: 1 (lower is better)
Translates to: IKLPLCKWTLDSGEP*FMYHLYHLLRLPMR
Trigger: CCTCATGGGCAAACGTAGTAGATGGTAAAGATGGTACATGAACCAAGGTTCACCTGAATCTAAAGTCCACTTACAGAGGGGGAGCTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649478.1
3UTR TCA 90 bp AGGAAGTTACTTAACCACCCTGTCTCTGCCTCTTCATCTGCAAACTaGACTGTGAGAATGAGAAGAGATGCCATCGATGAAGTATCTGAT +
Preference number: 1 (lower is better)
Translates to: RKLLNHPVSASSSAN*TVRMRRDAIDEVSD
Trigger: ATCAGATACTTCATCGATGGCATCTCTTCTCATTCTCACAGTTCAGTTTGCAGATGAAGAGGCAGAGACAGGGTGGTTAAGTAACTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649478.1
3UTR GCA 90 bp ACTGTGAGAATGAGAAGAGATGCCATCGATGAAGTATCTGATACCTaGTATTGCTATTCAATAGACTTTTATTCCTCCTGGGTCCCAGCA +
Preference number: 1 (lower is better)
Translates to: TVRMRRDAIDEVSDT*YCYSIDFYSSWVPA
Trigger: TGCTGGGACCCAGGAGGAATAAAAGTCTATTGAATAGCAATAGCAGGTATCAGATACTTCATCGATGGCATCTCTTCTCATTCTCACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649478.1
3UTR GCA 90 bp AGAATGAGAAGAGATGCCATCGATGAAGTATCTGATACCTGCTATTaGTATTCAATAGACTTTTATTCCTCCTGGGTCCCAGCATCTGTT +
Preference number: 1 (lower is better)
Translates to: RMRRDAIDEVSDTCY*YSIDFYSSWVPASV
Trigger: AACAGATGCTGGGACCCAGGAGGAATAAAAGTCTATTGAATAGCAATAGCAGGTATCAGATACTTCATCGATGGCATCTCTTCTCATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649478.1
3UTR CCA 90 bp GTATCTGATACCTGCTATTGCTATTCAATAGACTTTTATTCCTCCTaGGTCCCAGCATCTGTTAGCCTTTCCAAATCAAACAATCAGCTT +
Preference number: 1 (lower is better)
Translates to: VSDTCYCYSIDFYSS*VPASVSLSKSNNQL
Trigger: AAGCTGATTGTTTGATTTGGAAAGGCTAACAGATGCTGGGACCCAGGAGGAATAAAAGTCTATTGAATAGCAATAGCAGGTATCAGATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649478.1
3UTR-3UTR GCA 90 bp GGCGAGGCCACTCTTTCTGAGGCCCCGTCTGCGCAGCCCAGGCTTCTGCTGGGTCAGTCTCTGCGGGGCTaGTCTGGCGCATGGAGGGCT +
Preference number: 2 (lower is better)
Translates to: GEATLSEAPSAQPRLLLGQSLRG*SGAWRA
Trigger: AGCCCTCCATGCGCCAGAGCAGCCCCGCAGAGACTG...ACCCAGCAGAAGCCTGGGCTGCGCAGACGGGGCCTCAGAAAGAGTGGCCTCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376501.7
3UTR CAA 90 bp TGCTGTGCCACCCTCAGTGCCCCCTTGGCCTCCCTCCCATGCTTGTaGGCACCCAAACTCTGGAGGGGGCCAAGGCAGCAGAGGGCTGGT +
Preference number: 2 (lower is better)
Translates to: CCATLSAPLASLPCL*APKLWRGPRQQRAG
Trigger: ACCAGCCCTCTGCTGCCTTGGCCCCCTCCAGAGTTTGGGTGCCAACAAGCATGGGAGGGAGGCCAAGGGGGCACTGAGGGTGGCACAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR CAA 90 bp CTGTGCTGTGCCACCCTCAGTGCCCCCTTGGCCTCCCTCCCATGCTaGTTGGCACCCAAACTCTGGAGGGGGCCAAGGCAGCAGAGGGCT +
Preference number: 2 (lower is better)
Translates to: LCCATLSAPLASLPC*LAPKLWRGPRQQRA
Trigger: AGCCCTCTGCTGCCTTGGCCCCCTCCAGAGTTTGGGTGCCAACAAGCATGGGAGGGAGGCCAAGGGGGCACTGAGGGTGGCACAGCACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR-3UTR TCA 90 bp CAAGAGCACAGGGATGCCTGGGTCTGCAGCCATGGCTGGGCAGCTGCAGCTGCCACTCCTGGGCTGGGGTaGCTCAAAGGCTGGGCTCAG +
Preference number: 2 (lower is better)
Translates to: QEHRDAWVCSHGWAAAAATPGLG*LKGWAQ
Trigger: CTGAGCCCAGCCTTTGAGTCACCCCAGCCCAGGAGT...GGCAGCTGCAGCTGCCCAGCCATGGCTGCAGACCCAGGCATCCCTGTGCTCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR-3UTR GCA 90 bp CAAGAGCACAGGGATGCCTGGGTCTGCAGCCATGGCTGGGCAGCTGCAGCTGCCGGTGAGCACCACTCCTaGTTGTTCCTGGCTCCTGCC +
Preference number: 2 (lower is better)
Translates to: QEHRDAWVCSHGWAAAAAGEHHS*LFLAPA
Trigger: GGCAGGAGCCAGGAACAAGCAGGAGTGGTGCTCACC...GGCAGCTGCAGCTGCCCAGCCATGGCTGCAGACCCAGGCATCCCTGTGCTCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR-3UTR GCA 90 bp GAAGGTGGAGCTTCACCAGCGACACATCCCTTTCCACTCGGGAGCCTGTCGCTTCTGTGCCACCCTCAGTaGCCCCTTGGCCTCCCTCCC +
Preference number: 2 (lower is better)
Translates to: EGGASPATHPFPLGSLSLLCHPQ*PLGLPP
Trigger: GGGAGGGAGGCCAAGGGGGCACTGAGGGTGGCACAG...AAGCGACAGGCTCCCGAGTGGAAAGGGATGTGTCGCTGGTGAAGCTCCACCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR-3UTR GCA 90 bp CAAGAGCACAGGGATGCCTGGGTCTGCAGCCATGGCTGGGCAGCTGCAGCTGCCCATCTTTGCAGCAGCTaGTCCAGACAGGCCACTGCT +
Preference number: 2 (lower is better)
Translates to: QEHRDAWVCSHGWAAAAAHLCSS*SRQATA
Trigger: AGCAGTGGCCTGTCTGGAGCAGCTGCTGCAAAGATG...GGCAGCTGCAGCTGCCCAGCCATGGCTGCAGACCCAGGCATCCCTGTGCTCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR-3UTR GCA 90 bp CCTCTCTGCAGGCAGGTCATCCCCACTTCTGCCAGAGTCTGGCTGAGTCTAGGGAGGGATGCCTGGGTCTaGAGCCATGGCTGGGCAGCT +
Preference number: 2 (lower is better)
Translates to: PLCRQVIPTSARVWLSLGRDAWV*SHGWAA
Trigger: AGCTGCCCAGCCATGGCTGCAGACCCAGGCATCCCT...CCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGGATGACCTGCCTGCAGAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR-3UTR CCA 90 bp GAAGGTGGAGCTTCACCAGCGACACATCCCTTTCCACTCGGGAGCCTGTCGCTTCTGGGTCTGCAGCCATaGCTGGGCAGCTGCAGCTGC +
Preference number: 2 (lower is better)
Translates to: EGGASPATHPFPLGSLSLLGLQP*LGSCSC
Trigger: GCAGCTGCAGCTGCCCAGCCATGGCTGCAGACCCAG...AAGCGACAGGCTCCCGAGTGGAAAGGGATGTGTCGCTGGTGAAGCTCCACCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR-3UTR CCA 90 bp GAAGGTGGAGCTTCACCAGCGACACATCCCTTTCCACTCGGGAGCCTGTCGCTTGAGCACAGGGATGCCTaGGTCTGCAGCCATGGCTGG +
Preference number: 2 (lower is better)
Translates to: EGGASPATHPFPLGSLSLEHRDA*VCSHGW
Trigger: CCAGCCATGGCTGCAGACCCAGGCATCCCTGTGCTC...AAGCGACAGGCTCCCGAGTGGAAAGGGATGTGTCGCTGGTGAAGCTCCACCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR-3UTR GCA 90 bp GAAGGTGGAGCTTCACCAGCGACACATCCCTTTCCACTCGGGAGCCTGTCGCTTCCAAGAGCACAGGGATaGCTGGGTCTGCAGCCATGG +
Preference number: 2 (lower is better)
Translates to: EGGASPATHPFPLGSLSLPRAQG*LGLQPW
Trigger: CCATGGCTGCAGACCCAGGCATCCCTGTGCTCTTGG...AAGCGACAGGCTCCCGAGTGGAAAGGGATGTGTCGCTGGTGAAGCTCCACCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR-3UTR GCA 90 bp CCTCTCTGCAGGCAGGTCATCCCCACTTCTGCCAGAGTCTGGCTGAGTCTAGGGGAGCCTGTCGCTTCCTaGTGCTGTTCATGGTGCCCA +
Preference number: 2 (lower is better)
Translates to: PLCRQVIPTSARVWLSLGEPVAS*CCSWCP
Trigger: TGGGCACCATGAACAGCAGCAGGAAGCGACAGGCTC...CCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGGATGACCTGCCTGCAGAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR-3UTR CCA 90 bp CCCCACTTCTGCCAGAGTCTGGCTGAGTCTAGGGTTTTTATGGGCTTCAGAGGGCTGGGTCTGCAGCCATaGCTGGGCAGCTGCAGCTGC +
Preference number: 2 (lower is better)
Translates to: PHFCQSLAESRVFMGFRGLGLQP*LGSCSC
Trigger: GCAGCTGCAGCTGCCCAGCCATGGCTGCAGACCCAG...CCCTCTGAAGCCCATAAAAACCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR-3UTR GCA 90 bp CCCCACTTCTGCCAGAGTCTGGCTGAGTCTAGGGTTTTTATGGGCTTCAGAGGGACACCTGCAGGCCTGTaGTGTGCCACCCTCAGTGCC +
Preference number: 2 (lower is better)
Translates to: PHFCQSLAESRVFMGFRGTPAGL*CATLSA
Trigger: GGCACTGAGGGTGGCACAGCACAGGCCTGCAGGTGT...CCCTCTGAAGCCCATAAAAACCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR-3UTR CCA 90 bp CCTCTCTGCAGGCAGGTCATCCCCACTTCTGCCAGAGTCTGGCTGAGTCTAGGGCCCTACATTCCAGCCTaGGAGACAGTGAGATCCCTG +
Preference number: 2 (lower is better)
Translates to: PLCRQVIPTSARVWLSLGPYIPA*ETVRSL
Trigger: CAGGGATCTCACTGTCTCCCAGGCTGGAATGTAGGG...CCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGGATGACCTGCCTGCAGAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR-3UTR CCA 90 bp CCCCACTTCTGCCAGAGTCTGGCTGAGTCTAGGGTTTTTATGGGCTTCAGAGGGTCCAGTCTGTGGAACTaGCAGCCTGGCCCCCAGGCT +
Preference number: 2 (lower is better)
Translates to: PHFCQSLAESRVFMGFRGSSLWN*QPGPQA
Trigger: AGCCTGGGGGCCAGGCTGCCAGTTCCACAGACTGGA...CCCTCTGAAGCCCATAAAAACCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR-3UTR TCA 90 bp GCAAACCCGCCTTTTGGTAAACGGTGTCTGGCATTCCAGCAGAATCTTGGTTTGCGAGGCCACTCTTTCTaGGGCCCCGTCTGCGCAGCC +
Preference number: 2 (lower is better)
Translates to: ANPPFGKRCLAFQQNLGLRGHSF*GPVCAA
Trigger: GGCTGCGCAGACGGGGCCTCAGAAAGAGTGGCCTCG...CAAACCAAGATTCTGCTGGAATGCCAGACACCGTTTACCAAAAGGCGGGTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR-3UTR GCA 90 bp CCCCACTTCTGCCAGAGTCTGGCTGAGTCTAGGGTTTTTATGGGCTTCAGAGGGGGTGAGCACCACTCCTaGTTGTTCCTGGCTCCTGCC +
Preference number: 2 (lower is better)
Translates to: PHFCQSLAESRVFMGFRGGEHHS*LFLAPA
Trigger: GGCAGGAGCCAGGAACAAGCAGGAGTGGTGCTCACC...CCCTCTGAAGCCCATAAAAACCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR-3UTR GCA 90 bp CCCCACTTCTGCCAGAGTCTGGCTGAGTCTAGGGTTTTTATGGGCTTCAGAGGGCCTGTCGCTTCCTGCTaGTGTTCATGGTGCCCAGGC +
Preference number: 2 (lower is better)
Translates to: PHFCQSLAESRVFMGFRGPVASC*CSWCPG
Trigger: GCCTGGGCACCATGAACAGCAGCAGGAAGCGACAGG...CCCTCTGAAGCCCATAAAAACCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR-3UTR TCA 90 bp GAAGGTGGAGCTTCACCAGCGACACATCCCTTTCCACTCGGGAGCCTGTCGCTTCACCAACTCAGAAGGTaGGCACCACTCCTGCTTGTT +
Preference number: 2 (lower is better)
Translates to: EGGASPATHPFPLGSLSLHQLRR*APLLLV
Trigger: AACAAGCAGGAGTGGTGCTCACCTTCTGAGTTGGTG...AAGCGACAGGCTCCCGAGTGGAAAGGGATGTGTCGCTGGTGAAGCTCCACCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR-3UTR TCA 90 bp ACCAGGAGGCTGCTTCCAAGGAATTTCTGTCCAGGACGATGGCACAGAGAATACACGCCTGGGCTCTTCTaGGTCCCCGGAGCTCCTGAA +
Preference number: 2 (lower is better)
Translates to: TRRLLPRNFCPGRWHREYTPGLF*VPGAPE
Trigger: TTCAGGAGCTCCGGGGACTCAGAAGAGCCCAGGCGT...GTATTCTCTGTGCCATCGTCCTGGACAGAAATTCCTTGGAAGCAGCCTCCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR-3UTR GCA 90 bp GGTCATCCCCACTTCTGCCAGAGTCTGGCTGAGTCTAGGGTTTTTATGGGCTTCATGCCAAGGGACACCTaGAGGCCTGTGCTGTGCCAC +
Preference number: 2 (lower is better)
Translates to: GHPHFCQSLAESRVFMGFMPRDT*RPVLCH
Trigger: GTGGCACAGCACAGGCCTGCAGGTGTCCCTTGGCAT...GAAGCCCATAAAAACCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGGATGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR-3UTR GCA 90 bp GGTCATCCCCACTTCTGCCAGAGTCTGGCTGAGTCTAGGGTTTTTATGGGCTTCTGCCCAGGCTGTTCATaGCAAGGGACACCTGCAGGC +
Preference number: 2 (lower is better)
Translates to: GHPHFCQSLAESRVFMGFCPGCS*QGTPAG
Trigger: GCCTGCAGGTGTCCCTTGGCATGAACAGCCTGGGCA...GAAGCCCATAAAAACCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGGATGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR-3UTR CCA 90 bp CAAGAGCACAGGGATGCCTGGGTCTGCAGCCATGGCTGGGCAGCTGCAGCTGCCTTTGGAAACACAGTTTaGCACAGAGTCACAGAGATC +
Preference number: 2 (lower is better)
Translates to: QEHRDAWVCSHGWAAAAAFGNTV*HRVTEI
Trigger: GATCTCTGTGACTCTGTGCCAAACTGTGTTTCCAAA...GGCAGCTGCAGCTGCCCAGCCATGGCTGCAGACCCAGGCATCCCTGTGCTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR-3UTR CCA 90 bp CCTCTCTGCAGGCAGGTCATCCCCACTTCTGCCAGAGTCTGGCTGAGTCTAGGGGCTTCAAAATCAGAGTaGGTGCCAGGAGTGAGGAGA +
Preference number: 2 (lower is better)
Translates to: PLCRQVIPTSARVWLSLGASKSE*VPGVRR
Trigger: TCTCCTCACTCCTGGCACCCACTCTGATTTTGAAGC...CCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGGATGACCTGCCTGCAGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR-3UTR TCA 90 bp CCTCTCTGCAGGCAGGTCATCCCCACTTCTGCCAGAGTCTGGCTGAGTCTAGGGAGTTTAAGGCTACAGTaGGCTATGAGCACACCCTAC +
Preference number: 2 (lower is better)
Translates to: PLCRQVIPTSARVWLSLGSLRLQ*AMSTPY
Trigger: GTAGGGTGTGCTCATAGCTCACTGTAGCCTTAAACT...CCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGGATGACCTGCCTGCAGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR-3UTR TCA 90 bp CCGCCTTTTGGTAAACGGTGTCTGGCATTCCAGCAGAATCTTGGTTTGCATCCTAGTCCCCGGAGCTCCTaGATGGATGTGGTTGCCCCG +
Preference number: 2 (lower is better)
Translates to: PPFGKRCLAFQQNLGLHPSPRSS*MDVVAP
Trigger: CGGGGCAACCACATCCATTCAGGAGCTCCGGGGACT...AGGATGCAAACCAAGATTCTGCTGGAATGCCAGACACCGTTTACCAAAAGGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR-3UTR CCA 90 bp GGTCATCCCCACTTCTGCCAGAGTCTGGCTGAGTCTAGGGTTTTTATGGGCTTCAAGGCAGCAGAGGGCTaGTGTGTCAGCACCATCCCA +
Preference number: 2 (lower is better)
Translates to: GHPHFCQSLAESRVFMGFKAAEG*CVSTIP
Trigger: TGGGATGGTGCTGACACACCAGCCCTCTGCTGCCTT...GAAGCCCATAAAAACCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGGATGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR-3UTR CCA 90 bp CTTACTAAAGAATTTCTGACAGCCTTTAAGATGCGGCTAGGTGCCCTGTGCCGGGGCTGCTCTGGCGCATaGAGGGCTCCTCCAAGGACT +
Preference number: 2 (lower is better)
Translates to: LTKEFLTAFKMRLGALCRGCSGA*RAPPRT
Trigger: AGTCCTTGGAGGAGCCCTCCATGCGCCAGAGCAGCC...CCGGCACAGGGCACCTAGCCGCATCTTAAAGGCTGTCAGAAATTCTTTAGTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376501.7
3UTR-3UTR CCA 90 bp GCAAACCCGCCTTTTGGTAAACGGTGTCTGGCATTCCAGCAGAATCTTGGTTTGCCCGGAGCTCCTGAATaGATGTGGTTGCCCCGGAGG +
Preference number: 2 (lower is better)
Translates to: ANPPFGKRCLAFQQNLGLPGAPE*MWLPRR
Trigger: CCTCCGGGGCAACCACATCCATTCAGGAGCTCCGGG...CAAACCAAGATTCTGCTGGAATGCCAGACACCGTTTACCAAAAGGCGGGTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR-3UTR CCA 90 bp GAAACAGAGCTCCCATACAAAGGGAGAGGACCCAAAGAGGGTAGCCCTCTATGTGACCATGGTTGGGCCTaGGACATCCGGTGGCTCAGA +
Preference number: 2 (lower is better)
Translates to: ETELPYKGRGPKEGSPLCDHGWA*DIRWLR
Trigger: TCTGAGCCACCGGATGTCCCAGGCCCAACCATGGTC...ACATAGAGGGCTACCCTCTTTGGGTCCTCTCCCTTTGTATGGGAGCTCTGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649478.1
3UTR-3UTR CCA 90 bp GAGCTCCCATACAAAGGGAGAGGACCCAAAGAGGGTAGCCCTCTATGTGTATTAGCTCTGGACCATGGTTaGGCCTGGGACATCCGGTGG +
Preference number: 2 (lower is better)
Translates to: ELPYKGRGPKEGSPLCVLALDHG*AWDIRW
Trigger: CCACCGGATGTCCCAGGCCCAACCATGGTCCAGAGC...TAATACACATAGAGGGCTACCCTCTTTGGGTCCTCTCCCTTTGTATGGGAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649478.1
3UTR-3UTR TCA 90 bp AACGCTCCACAGCGCTATACCATCCCATGTACTTGCGTTGAAAAGAACACGTCTACGCCTGGGCTCTTCTaGGTCCCCGGAGCTCCTGAA +
Preference number: 2 (lower is better)
Translates to: NAPQRYTIPCTCVEKNTSTPGLF*VPGAPE
Trigger: TTCAGGAGCTCCGGGGACTCAGAAGAGCCCAGGCGT...AGACGTGTTCTTTTCAACGCAAGTACATGGGATGGTATAGCGCTGTGGAGCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR-3UTR CCA 90 bp GAAGGTGGAGCTTCACCAGCGACACATCCCTTTCCACTCGGGAGCCTGTCGCTTCAGAGCAATCTGTCCTaGGATGTTTTCAGCTGCAAG +
Preference number: 2 (lower is better)
Translates to: EGGASPATHPFPLGSLSLQSNLS*DVFSCK
Trigger: CTTGCAGCTGAAAACATCCCAGGACAGATTGCTCTG...AAGCGACAGGCTCCCGAGTGGAAAGGGATGTGTCGCTGGTGAAGCTCCACCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR-3UTR CCA 90 bp CTTCCCACTCTTAGACGCCTGGGCTCTTCTGAGTCCCCGGAGCTCCTGAATGGACAAGGACTCTTCTTTTaGGGATTCCGACAACTTCCC +
Preference number: 2 (lower is better)
Translates to: LPTLRRLGSSESPELLNGQGLFF*GFRQLP
Trigger: GGGAAGTTGTCGGAATCCCCAAAAGAAGAGTCCTTG...TCCATTCAGGAGCTCCGGGGACTCAGAAGAGCCCAGGCGTCTAAGAGTGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376501.7
3UTR-3UTR CCA 90 bp ACGGTGTCTGGCATTCCAGCAGAATCTTGGTTTGCATCCTTACCAGGAAGCAAACCCGGAGCTCCTGAATaGATGTGGTTGCCCCGGAGG +
Preference number: 2 (lower is better)
Translates to: TVSGIPAESWFASLPGSKPGAPE*MWLPRR
Trigger: CCTCCGGGGCAACCACATCCATTCAGGAGCTCCGGG...TTTGCTTCCTGGTAAGGATGCAAACCAAGATTCTGCTGGAATGCCAGACACCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR-3UTR CCA 90 bp AACCAGGAGGCTGCTTCCAAGGAATTTCTGTCCAGGACGATGGCACAGAGAATACCACTCTTAGACGCCTaGGCTCTTCTGAGTCCCCGG +
Preference number: 2 (lower is better)
Translates to: NQEAASKEFLSRTMAQRIPLLDA*ALLSPR
Trigger: CCGGGGACTCAGAAGAGCCCAGGCGTCTAAGAGTGG...TATTCTCTGTGCCATCGTCCTGGACAGAAATTCCTTGGAAGCAGCCTCCTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR-3UTR CCA 90 bp GAGCTCCCATACAAAGGGAGAGGACCCAAAGAGGGTAGCCCTCTATGTGTATTATCCAGCTCTGGACCATaGTTGGGCCTGGGACATCCG +
Preference number: 2 (lower is better)
Translates to: ELPYKGRGPKEGSPLCVLSSSGP*LGLGHP
Trigger: CGGATGTCCCAGGCCCAACCATGGTCCAGAGCTGGA...TAATACACATAGAGGGCTACCCTCTTTGGGTCCTCTCCCTTTGTATGGGAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649478.1
3UTR-3UTR CCA 90 bp CCCCACTTCTGCCAGAGTCTGGCTGAGTCTAGGGTTTTTATGGGCTTCAGAGGGAACAGCGCCTGGGCTTaGCCACAACTTTGCTTCAAA +
Preference number: 2 (lower is better)
Translates to: PHFCQSLAESRVFMGFRGNSAWA*PQLCFK
Trigger: TTTGAAGCAAAGTTGTGGCCAAGCCCAGGCGCTGTT...CCCTCTGAAGCCCATAAAAACCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR-3UTR CCA 90 bp CCCCACTTCTGCCAGAGTCTGGCTGAGTCTAGGGTTTTTATGGGCTTCAGAGGGGAAGCTCATGCTGATTaGTCAATGGGCAGCCATAGG +
Preference number: 2 (lower is better)
Translates to: PHFCQSLAESRVFMGFRGEAHAD*SMGSHR
Trigger: CCTATGGCTGCCCATTGACCAATCAGCATGAGCTTC...CCCTCTGAAGCCCATAAAAACCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR CAA 90 bp GGGCTTTCCTTAAAGGCGTGGAAAGGAGCGCGCACAAGGCGCGCATaGAGGTCTATTCGAGCGCAGTGCTGGTTAATATACATAATCTGG +
Preference number: 2 (lower is better)
Translates to: GLSLKAWKGARTRRA*RSIRAQCWLIYIIW
Trigger: CCAGATTATGTATATTAACCAGCACTGCGCTCGAATAGACCTCAATGCGCGCCTTGTGCGCGCTCCTTTCCACGCCTTTAAGGAAAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR-3UTR TCA 90 bp ACTGTAGAATTCTGTAATCCAGAGCCTACGATTCAGATACAGGCTCTTAACAAGCGAGGCCACTCTTTCTaGGGCCCCGTCTGCGCAGCC +
Preference number: 2 (lower is better)
Translates to: TVEFCNPEPTIQIQALNKRGHSF*GPVCAA
Trigger: GGCTGCGCAGACGGGGCCTCAGAAAGAGTGGCCTCG...CTTGTTAAGAGCCTGTATCTGAATCGTAGGCTCTGGATTACAGAATTCTACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR-3UTR GCA 90 bp AACGCTCCACAGCGCTATACCATCCCATGTACTTGCGTTGAAAAGAACACGTCTCTGAATGGATGTGGTTaGCCCGGAGGTTCAGTGCGC +
Preference number: 2 (lower is better)
Translates to: NAPQRYTIPCTCVEKNTSLNGCG*PGGSVR
Trigger: GCGCACTGAACCTCCGGGGCAACCACATCCATTCAG...AGACGTGTTCTTTTCAACGCAAGTACATGGGATGGTATAGCGCTGTGGAGCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR-3UTR GCA 90 bp TTTGATATCACACCCAACCAGGAGGCTGCTTCCAAGGAATTTCTGTCCAGGACGCGGCTAGGTGCCCTGTaGCGGGGTAAGATAAGAATG +
Preference number: 2 (lower is better)
Translates to: FDITPNQEAASKEFLSRTRLGAL*RGKIRM
Trigger: CATTCTTATCTTACCCCGGCACAGGGCACCTAGCCG...CGTCCTGGACAGAAATTCCTTGGAAGCAGCCTCCTGGTTGGGTGTGATATCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR-3UTR CCA 90 bp TCCCATGTACTTGCGTTGAAAAGAACACGTCTCTCTCCAATTAAATCTTGTTCCTCTGCGGGGCTGCTCTaGCGCATGGAGGGCTCCTCC +
Preference number: 2 (lower is better)
Translates to: SHVLALKRTRLSPIKSCSSAGLL*RMEGSS
Trigger: GGAGGAGCCCTCCATGCGCCAGAGCAGCCCCGCAGA...GGAACAAGATTTAATTGGAGAGAGACGTGTTCTTTTCAACGCAAGTACATGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376501.7
3UTR-3UTR CCA 90 bp TCACACCCAACCAGGAGGCTGCTTCCAAGGAATTTCTGTCCAGGACGATGGCACGTTGGACATTACGCATaGAAGAAAAGCAAACCCGCC +
Preference number: 2 (lower is better)
Translates to: SHPTRRLLPRNFCPGRWHVGHYA*KKSKPA
Trigger: GGCGGGTTTGCTTTTCTTCCATGCGTAATGTCCAAC...GTGCCATCGTCCTGGACAGAAATTCCTTGGAAGCAGCCTCCTGGTTGGGTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR-3UTR CCA 90 bp ACCAGGAGGCTGCTTCCAAGGAATTTCTGTCCAGGACGATGGCACAGAGAATACGTTGGTGGAAATGGCTaGCAGCCAGTTCTGGGAAAG +
Preference number: 2 (lower is better)
Translates to: TRRLLPRNFCPGRWHREYVGGNG*QPVLGK
Trigger: CTTTCCCAGAACTGGCTGCCAGCCATTTCCACCAAC...GTATTCTCTGTGCCATCGTCCTGGACAGAAATTCCTTGGAAGCAGCCTCCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR-3UTR TCA 90 bp TCACACCCAACCAGGAGGCTGCTTCCAAGGAATTTCTGTCCAGGACGATGGCACATTAACCCTCTCTGGTaGAACTCTGCTGGAAACCAA +
Preference number: 2 (lower is better)
Translates to: SHPTRRLLPRNFCPGRWHINPLW*NSAGNQ
Trigger: TTGGTTTCCAGCAGAGTTTCACCAGAGAGGGTTAAT...GTGCCATCGTCCTGGACAGAAATTCCTTGGAAGCAGCCTCCTGGTTGGGTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR-3UTR CCA 90 bp GGTCATCCCCACTTCTGCCAGAGTCTGGCTGAGTCTAGGGTTTTTATGGGCTTCCATATTTTTGACTCCTaGGCTGGGGTGACTCAAAGG +
Preference number: 2 (lower is better)
Translates to: GHPHFCQSLAESRVFMGFHIFDS*AGVTQR
Trigger: CCTTTGAGTCACCCCAGCCCAGGAGTCAAAAATATG...GAAGCCCATAAAAACCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGGATGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR-3UTR TCA 90 bp GGTCATCCCCACTTCTGCCAGAGTCTGGCTGAGTCTAGGGTTTTTATGGGCTTCTCAGATTCCACCTCTTaGTGGGAGAGAAACATTGCA +
Preference number: 2 (lower is better)
Translates to: GHPHFCQSLAESRVFMGFSDSTS*WERNIA
Trigger: TGCAATGTTTCTCTCCCATCAAGAGGTGGAATCTGA...GAAGCCCATAAAAACCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGGATGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR-3UTR TCA 90 bp GAAATGAAGCAGTTTGATATCACACCCAACCAGGAGGCTGCTTCCAAGGAATTTGCACAAGGCGCGCATTaGGGTCTATTCGAGCGCAGT +
Preference number: 2 (lower is better)
Translates to: EMKQFDITPNQEAASKEFAQGAH*GLFERS
Trigger: ACTGCGCTCGAATAGACCTCAATGCGCGCCTTGTGC...AAATTCCTTGGAAGCAGCCTCCTGGTTGGGTGTGATATCAAACTGCTTCATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR-3UTR CCA 90 bp GGTCATCCCCACTTCTGCCAGAGTCTGGCTGAGTCTAGGGTTTTTATGGGCTTCCCAGGGTTACTTTCATaGCTCCATGACATTACCAAG +
Preference number: 2 (lower is better)
Translates to: GHPHFCQSLAESRVFMGFPGLLS*LHDITK
Trigger: CTTGGTAATGTCATGGAGCCATGAAAGTAACCCTGG...GAAGCCCATAAAAACCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGGATGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR-3UTR CCA 90 bp CTGCTTGTTCCTGGCTCCTGCCAGCTTAGTAGAGTGTACAGCCCTGGCCATATCTGTAGATCTTCCATATaGCATGGGCTTTTGTCAGCA +
Preference number: 2 (lower is better)
Translates to: LLVPGSCQLSRVYSPGHICRSSI*HGLLSA
Trigger: TGCTGACAAAAGCCCATGCCATATGGAAGATCTACA...GATATGGCCAGGGCTGTACACTCTACTAAGCTGGCAGGAGCCAGGAACAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR CAA 90 bp CATTGCACAAGAGCAGGTAAGTGGGAGACAGTGTCACAGATGCCTTaGGAAACACAGTTTGGCACAGAGTCACAGAGATCGTTAGCAGAG +
Preference number: 2 (lower is better)
Translates to: HCTRAGKWETVSQMP*ETQFGTESQRSLAE
Trigger: CTCTGCTAACGATCTCTGTGACTCTGTGCCAAACTGTGTTTCCAAAGGCATCTGTGACACTGTCTCCCACTTACCTGCTCTTGTGCAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR-3UTR TCA 90 bp CACAGAGTCACAGAGATCGTTAGCAGAGCAATCTGTCCTGGGATGTTTTCAGCTGGGGTTGTTATCTCATaGATAAGAGGCCAGAGGCAG +
Preference number: 2 (lower is better)
Translates to: HRVTEIVSRAICPGMFSAGVVIS*IRGQRQ
Trigger: CTGCCTCTGGCCTCTTATTCATGAGATAACAACCCC...AGCTGAAAACATCCCAGGACAGATTGCTCTGCTAACGATCTCTGTGACTCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR-3UTR TCA 90 bp GGTCATCCCCACTTCTGCCAGAGTCTGGCTGAGTCTAGGGTTTTTATGGGCTTCAGGCCACTGCTGAAATaGTTACATGGTTTATGGATG +
Preference number: 2 (lower is better)
Translates to: GHPHFCQSLAESRVFMGFRPLLK*LHGLWM
Trigger: CATCCATAAACCATGTAATCATTTCAGCAGTGGCCT...GAAGCCCATAAAAACCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGGATGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR-3UTR TCA 90 bp TCACACCCAACCAGGAGGCTGCTTCCAAGGAATTTCTGTCCAGGACGATGGCACTTACTAAAGAATTTCTaGCAGCCTTTAAGATGCGGC +
Preference number: 2 (lower is better)
Translates to: SHPTRRLLPRNFCPGRWHLLKNF*QPLRCG
Trigger: GCCGCATCTTAAAGGCTGTCAGAAATTCTTTAGTAA...GTGCCATCGTCCTGGACAGAAATTCCTTGGAAGCAGCCTCCTGGTTGGGTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR-3UTR GCA 90 bp AAAGAAGCGCCAAACTGTGTAACTGTAATTCAGCCAAGGACTGCTAAAACAAGGCTGAATGGATGTGGTTaGCCCGGAGGTTCAGTGCGC +
Preference number: 2 (lower is better)
Translates to: KEAPNCVTVIQPRTAKTRLNGCG*PGGSVR
Trigger: GCGCACTGAACCTCCGGGGCAACCACATCCATTCAG...CCTTGTTTTAGCAGTCCTTGGCTGAATTACAGTTACACAGTTTGGCGCTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR-3UTR CCA 90 bp TCACACCCAACCAGGAGGCTGCTTCCAAGGAATTTCTGTCCAGGACGATGGCACATTCGAGCGCAGTGCTaGTTAATATACATAATCTGG +
Preference number: 2 (lower is better)
Translates to: SHPTRRLLPRNFCPGRWHIRAQC*LIYIIW
Trigger: CCAGATTATGTATATTAACCAGCACTGCGCTCGAAT...GTGCCATCGTCCTGGACAGAAATTCCTTGGAAGCAGCCTCCTGGTTGGGTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR-3UTR CCA 90 bp ACCTGCTATTGCTATTCAATAGACTTTTATTCCTCCTGGGTCCCAGCATCTGTTAATCCTCTCCAGCTCTaGACCATGGTTGGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: TCYCYSIDFYSSWVPASVNPLQL*TMVGPG
Trigger: CCCAGGCCCAACCATGGTCCAGAGCTGGAGAGGATT...AACAGATGCTGGGACCCAGGAGGAATAAAAGTCTATTGAATAGCAATAGCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649478.1
3UTR-3UTR CCA 90 bp GAGCTCCCATACAAAGGGAGAGGACCCAAAGAGGGTAGCCCTCTATGTGTATTAGACTTTTATTCCTCCTaGGTCCCAGCATCTGTTAGC +
Preference number: 2 (lower is better)
Translates to: ELPYKGRGPKEGSPLCVLDFYSS*VPASVS
Trigger: GCTAACAGATGCTGGGACCCAGGAGGAATAAAAGTC...TAATACACATAGAGGGCTACCCTCTTTGGGTCCTCTCCCTTTGTATGGGAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649478.1
3UTR-3UTR CCA 90 bp GAAACAGAGCTCCCATACAAAGGGAGAGGACCCAAAGAGGGTAGCCCTCTATGTCTCCCCCTCTGTAAGTaGACTTTAGATTCAGGTGAA +
Preference number: 2 (lower is better)
Translates to: ETELPYKGRGPKEGSPLCLPLCK*TLDSGE
Trigger: TTCACCTGAATCTAAAGTCCACTTACAGAGGGGGAG...ACATAGAGGGCTACCCTCTTTGGGTCCTCTCCCTTTGTATGGGAGCTCTGTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649478.1
3UTR CAA 90 bp CAAACCCGCCTTTTGGTAAACGGTGTCTGGCATTCCAGCAGAATCTaGGTTTGCATCCTTACCAGGAAGCAAAACTCCAAAGAGTTTCCC +
Preference number: 2 (lower is better)
Translates to: QTRLLVNGVWHSSRI*VCILTRKQNSKEFP
Trigger: GGGAAACTCTTTGGAGTTTTGCTTCCTGGTAAGGATGCAAACCAAGATTCTGCTGGAATGCCAGACACCGTTTACCAAAAGGCGGGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR-3UTR TCA 90 bp TTGGAAACACAGTTTGGCACAGAGTCACAGAGATCGTTAGCAGAGCAATCTGTCGGGGTTGTTATCTCATaGATAAGAGGCCAGAGGCAG +
Preference number: 2 (lower is better)
Translates to: LETQFGTESQRSLAEQSVGVVIS*IRGQRQ
Trigger: CTGCCTCTGGCCTCTTATTCATGAGATAACAACCCC...GACAGATTGCTCTGCTAACGATCTCTGTGACTCTGTGCCAAACTGTGTTTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR-3UTR TCA 90 bp GAAACAGAGCTCCCATACAAAGGGAGAGGACCCAAAGAGGGTAGCCCTCTATGTGACTTTAGATTCAGGTaGACCTTGGTTCATGTACCA +
Preference number: 2 (lower is better)
Translates to: ETELPYKGRGPKEGSPLCDFRFR*TLVHVP
Trigger: TGGTACATGAACCAAGGTTCACCTGAATCTAAAGTC...ACATAGAGGGCTACCCTCTTTGGGTCCTCTCCCTTTGTATGGGAGCTCTGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649478.1
3UTR-3UTR GCA 90 bp GAAATGAAGCAGTTTGATATCACACCCAACCAGGAGGCTGCTTCCAAGGAATTTTTAATCAACAGTCTCTaGGGGGCTGCTCTGGCGCAT +
Preference number: 2 (lower is better)
Translates to: EMKQFDITPNQEAASKEFLINSL*GAALAH
Trigger: ATGCGCCAGAGCAGCCCCGCAGAGACTGTTGATTAA...AAATTCCTTGGAAGCAGCCTCCTGGTTGGGTGTGATATCAAACTGCTTCATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000376501.7
3UTR CAA 90 bp GAACCAAGTTGGACATTACGCATGGAAGAAAAGCAAACCCGCCTTTaGGTAAACGGTGTCTGGCATTCCAGCAGAATCTTGGTTTGCATC +
Preference number: 2 (lower is better)
Translates to: EPSWTLRMEEKQTRL*VNGVWHSSRILVCI
Trigger: GATGCAAACCAAGATTCTGCTGGAATGCCAGACACCGTTTACCAAAAGGCGGGTTTGCTTTTCTTCCATGCGTAATGTCCAACTTGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR-3UTR TCA 90 bp GAAATGAAGCAGTTTGATATCACACCCAACCAGGAGGCTGCTTCCAAGGAATTTCAACTTCCCTTTTGGTaGAAGTTGAAGGGCTGCCTG +
Preference number: 2 (lower is better)
Translates to: EMKQFDITPNQEAASKEFQLPFW*KLKGCL
Trigger: CAGGCAGCCCTTCAACTTTCACCAAAAGGGAAGTTG...AAATTCCTTGGAAGCAGCCTCCTGGTTGGGTGTGATATCAAACTGCTTCATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376501.7
3UTR-3UTR TCA 90 bp ACCAGGAGGCTGCTTCCAAGGAATTTCTGTCCAGGACGATGGCACAGAGAATACGACAGCAAAACAGGTTaGTGCTTTTGGTATAGAAAG +
Preference number: 2 (lower is better)
Translates to: TRRLLPRNFCPGRWHREYDSKTG*CFWYRK
Trigger: CTTTCTATACCAAAAGCATCAACCTGTTTTGCTGTC...GTATTCTCTGTGCCATCGTCCTGGACAGAAATTCCTTGGAAGCAGCCTCCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR-3UTR TCA 90 bp GAGCTCCCATACAAAGGGAGAGGACCCAAAGAGGGTAGCCCTCTATGTGTATTACTTAAACTTCCTCCTTaGCAGGAGTTTAGGTTCTTC +
Preference number: 2 (lower is better)
Translates to: ELPYKGRGPKEGSPLCVLLKLPP*QEFRFF
Trigger: GAAGAACCTAAACTCCTGTCAAGGAGGAAGTTTAAG...TAATACACATAGAGGGCTACCCTCTTTGGGTCCTCTCCCTTTGTATGGGAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649478.1
3UTR-3UTR GCA 90 bp CACAGAGTCACAGAGATCGTTAGCAGAGCAATCTGTCCTGGGATGTTTTCAGCTTACCAAGGACCCCTCTaGTTCTTATCTTTCCACCTT +
Preference number: 2 (lower is better)
Translates to: HRVTEIVSRAICPGMFSAYQGPL*FLSFHL
Trigger: AAGGTGGAAAGATAAGAAGCAGAGGGGTCCTTGGTA...AGCTGAAAACATCCCAGGACAGATTGCTCTGCTAACGATCTCTGTGACTCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR-3UTR CCA 90 bp TCCAAGGAATTTCTGTCCAGGACGATGGCACAGAGAATACAAATTTTATTTCATCCACTCTTAGACGCCTaGGCTCTTCTGAGTCCCCGG +
Preference number: 2 (lower is better)
Translates to: SKEFLSRTMAQRIQILFHPLLDA*ALLSPR
Trigger: CCGGGGACTCAGAAGAGCCCAGGCGTCTAAGAGTGG...ATGAAATAAAATTTGTATTCTCTGTGCCATCGTCCTGGACAGAAATTCCTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR-3UTR CCA 90 bp GAAACAGAGCTCCCATACAAAGGGAGAGGACCCAAAGAGGGTAGCCCTCTATGTGATTCAGGTGAACCTTaGTTCATGTACCATCTTTAC +
Preference number: 2 (lower is better)
Translates to: ETELPYKGRGPKEGSPLCDSGEP*FMYHLY
Trigger: GTAAAGATGGTACATGAACCAAGGTTCACCTGAATC...ACATAGAGGGCTACCCTCTTTGGGTCCTCTCCCTTTGTATGGGAGCTCTGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649478.1
3UTR-3UTR TCA 90 bp TTGGTTTGCATCCTTACCAGGAAGCAAAACTCCAAAGAGTTTCCCTACTTACTAGGGCTGCCTGATCACTaGCTACATCCACATGCTTAC +
Preference number: 2 (lower is better)
Translates to: LVCILTRKQNSKEFPYLLGLPDH*LHPHAY
Trigger: GTAAGCATGTGGATGTAGTCAGTGATCAGGCAGCCC...TAGTAAGTAGGGAAACTCTTTGGAGTTTTGCTTCCTGGTAAGGATGCAAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376501.7
3UTR-3UTR TCA 90 bp TCCAAGGAATTTCTGTCCAGGACGATGGCACAGAGAATACAAATTTTATTTCATGCACAAGGCGCGCATTaGGGTCTATTCGAGCGCAGT +
Preference number: 2 (lower is better)
Translates to: SKEFLSRTMAQRIQILFHAQGAH*GLFERS
Trigger: ACTGCGCTCGAATAGACCTCAATGCGCGCCTTGTGC...ATGAAATAAAATTTGTATTCTCTGTGCCATCGTCCTGGACAGAAATTCCTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR-3UTR TCA 90 bp TTTGATATCACACCCAACCAGGAGGCTGCTTCCAAGGAATTTCTGTCCAGGACGGACAGCAAAACAGGTTaGTGCTTTTGGTATAGAAAG +
Preference number: 2 (lower is better)
Translates to: FDITPNQEAASKEFLSRTDSKTG*CFWYRK
Trigger: CTTTCTATACCAAAAGCATCAACCTGTTTTGCTGTC...CGTCCTGGACAGAAATTCCTTGGAAGCAGCCTCCTGGTTGGGTGTGATATCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR-3UTR TCA 90 bp AACGCTCCACAGCGCTATACCATCCCATGTACTTGCGTTGAAAAGAACACGTCTAGAATGAATCTTGCTTaGGGAAATGTACGATCTCCC +
Preference number: 2 (lower is better)
Translates to: NAPQRYTIPCTCVEKNTSRMNLA*GNVRSP
Trigger: GGGAGATCGTACATTTCCTCAAGCAAGATTCATTCT...AGACGTGTTCTTTTCAACGCAAGTACATGGGATGGTATAGCGCTGTGGAGCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR-3UTR GCA 90 bp AACCAGGAGGCTGCTTCCAAGGAATTTCTGTCCAGGACGATGGCACAGAGAATACTGACTACATCCACATaGTTACCGTCTATTGAAGAT +
Preference number: 2 (lower is better)
Translates to: NQEAASKEFLSRTMAQRILTTST*LPSIED
Trigger: ATCTTCAATAGACGGTAAGCATGTGGATGTAGTCAG...TATTCTCTGTGCCATCGTCCTGGACAGAAATTCCTTGGAAGCAGCCTCCTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376501.7
3UTR-3UTR CCA 90 bp TTGGAAACACAGTTTGGCACAGAGTCACAGAGATCGTTAGCAGAGCAATCTGTCCCAGGGTTACTTTCATaGCTCCATGACATTACCAAG +
Preference number: 2 (lower is better)
Translates to: LETQFGTESQRSLAEQSVPGLLS*LHDITK
Trigger: CTTGGTAATGTCATGGAGCCATGAAAGTAACCCTGG...GACAGATTGCTCTGCTAACGATCTCTGTGACTCTGTGCCAAACTGTGTTTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR-3UTR GCA 90 bp GAGCTCCCATACAAAGGGAGAGGACCCAAAGAGGGTAGCCCTCTATGTGTATTATTAGGTTCTTCTTTCTaGCTTCTCAGTCATTCCATT +
Preference number: 2 (lower is better)
Translates to: ELPYKGRGPKEGSPLCVLLGSSF*LLSHSI
Trigger: AATGGAATGACTGAGAAGGCAGAAAGAAGAACCTAA...TAATACACATAGAGGGCTACCCTCTTTGGGTCCTCTCCCTTTGTATGGGAGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649478.1
3UTR-3UTR CCA 90 bp ACCTGCTATTGCTATTCAATAGACTTTTATTCCTCCTGGGTCCCAGCATCTGTTCATTCTGTTCCAAGTTaGCTTCTTGGAAGCTCTGGC +
Preference number: 2 (lower is better)
Translates to: TCYCYSIDFYSSWVPASVHSVPS*LLGSSG
Trigger: GCCAGAGCTTCCAAGAAGCCAACTTGGAACAGAATG...AACAGATGCTGGGACCCAGGAGGAATAAAAGTCTATTGAATAGCAATAGCAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649478.1
3UTR CAA 90 bp GCTCGAATAACGCTCCACAGCGCTATACCATCCCATGTACTTGCGTaGAAAAGAACACGTCTCTCTCCAATTAAATCTTGTTCCTTTTAC +
Preference number: 2 (lower is better)
Translates to: ARITLHSAIPSHVLA*KRTRLSPIKSCSFY
Trigger: GTAAAAGGAACAAGATTTAATTGGAGAGAGACGTGTTCTTTTCAACGCAAGTACATGGGATGGTATAGCGCTGTGGAGCGTTATTCGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR-3UTR GCA 90 bp GAGCTCCCATACAAAGGGAGAGGACCCAAAGAGGGTAGCCCTCTATGTGTATTAGAAGTATCTGATACCTaGTATTGCTATTCAATAGAC +
Preference number: 2 (lower is better)
Translates to: ELPYKGRGPKEGSPLCVLEVSDT*YCYSID
Trigger: GTCTATTGAATAGCAATAGCAGGTATCAGATACTTC...TAATACACATAGAGGGCTACCCTCTTTGGGTCCTCTCCCTTTGTATGGGAGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649478.1
3UTR-3UTR CCA 90 bp TCCAAGGAATTTCTGTCCAGGACGATGGCACAGAGAATACAAATTTTATTTCATCTTTCCTTAAAGGCGTaGAAAGGAGCGCGCACAAGG +
Preference number: 2 (lower is better)
Translates to: SKEFLSRTMAQRIQILFHLSLKA*KGARTR
Trigger: CCTTGTGCGCGCTCCTTTCCACGCCTTTAAGGAAAG...ATGAAATAAAATTTGTATTCTCTGTGCCATCGTCCTGGACAGAAATTCCTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR-3UTR CCA 90 bp GGTGAAACTCTGCTGGAAACCAACTCACCAGCAATTGCCATTAATCTACTTACTTTGGTAAACGGTGTCTaGCATTCCAGCAGAATCTTG +
Preference number: 2 (lower is better)
Translates to: GETLLETNSPAIAINLLTLVNGV*HSSRIL
Trigger: CAAGATTCTGCTGGAATGCCAGACACCGTTTACCAA...AGTAAGTAGATTAATGGCAATTGCTGGTGAGTTGGTTTCCAGCAGAGTTTCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR-3UTR CCA 90 bp CTTCCAAGGAATTTCTGTCCAGGACGATGGCACAGAGAATACAAATTTTATTTCAGGGCAACACTCCTTTaGAGACAGCGGCATATAGTG +
Preference number: 2 (lower is better)
Translates to: LPRNFCPGRWHREYKFYFRATLL*RQRHIV
Trigger: CACTATATGCCGCTGTCTCCAAAGGAGTGTTGCCCT...GAAATAAAATTTGTATTCTCTGTGCCATCGTCCTGGACAGAAATTCCTTGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR-3UTR CCA 90 bp TATTCAATAGACTTTTATTCCTCCTGGGTCCCAGCATCTGTTAGCCTTTCCAAATCCAAGTTGGCTTCTTaGAAGCTCTGGCTTGGAAAG +
Preference number: 2 (lower is better)
Translates to: YSIDFYSSWVPASVSLSKSKLAS*KLWLGK
Trigger: CTTTCCAAGCCAGAGCTTCCAAGAAGCCAACTTGGA...TTTGGAAAGGCTAACAGATGCTGGGACCCAGGAGGAATAAAAGTCTATTGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649478.1
3UTR CAA 90 bp GGGTCCCAGCATCTGTTAGCCTTTCCAAATCAAACAATCAGCTTCTaGTTCTTAGAACTTAAGAATAAAATCCTCTCCAGCTCTGGACCA +
Preference number: 2 (lower is better)
Translates to: GSQHLLAFPNQTISF*FLELKNKILSSSGP
Trigger: TGGTCCAGAGCTGGAGAGGATTTTATTCTTAAGTTCTAAGAACAAGAAGCTGATTGTTTGATTTGGAAAGGCTAACAGATGCTGGGACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649478.1
3UTR-3UTR TCA 90 bp CCCTCCTTCCCTCTTTCTCTTTCTTCCTTCCGTCTTCTTCCATTAAATATTAATAGTTTAAGGCTACAGTaGGCTATGAGCACACCCTAC +
Preference number: 2 (lower is better)
Translates to: PSFPLSLSSFRLLPLNINSLRLQ*AMSTPY
Trigger: GTAGGGTGTGCTCATAGCTCACTGTAGCCTTAAACT...ATTAATATTTAATGGAAGAAGACGGAAGGAAGAAAGAGAAAGAGGGAAGGAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR-3UTR CCA 90 bp CCCTCCTTCCCTCTTTCTCTTTCTTCCTTCCGTCTTCTTCCATTAAATATTAATACAAGAGCAGGTAAGTaGGAGACAGTGTCACAGATG +
Preference number: 2 (lower is better)
Translates to: PSFPLSLSSFRLLPLNINTRAGK*ETVSQM
Trigger: CATCTGTGACACTGTCTCCCACTTACCTGCTCTTGT...ATTAATATTTAATGGAAGAAGACGGAAGGAAGAAAGAGAAAGAGGGAAGGAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR-3UTR TCA 90 bp CCCTCCTTCCCTCTTTCTCTTTCTTCCTTCCGTCTTCTTCCATTAAATATTAATTCAGATTCCACCTCTTaGTGGGAGAGAAACATTGCA +
Preference number: 2 (lower is better)
Translates to: PSFPLSLSSFRLLPLNINSDSTS*WERNIA
Trigger: TGCAATGTTTCTCTCCCATCAAGAGGTGGAATCTGA...ATTAATATTTAATGGAAGAAGACGGAAGGAAGAAAGAGAAAGAGGGAAGGAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR-3UTR TCA 90 bp CGCATTGAGGTCTATTCGAGCGCAGTGCTGGTTAATATACATAATCTGGAGAGAAGATGTACAATGACTTaGAGAGGATATAGCTGTCAT +
Preference number: 2 (lower is better)
Translates to: RIEVYSSAVLVNIHNLERRCTMT*RGYSCH
Trigger: ATGACAGCTATATCCTCTTCAAGTCATTGTACATCT...TCTCTCCAGATTATGTATATTAACCAGCACTGCGCTCGAATAGACCTCAATGCG
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376501.7
3UTR-3UTR GCA 90 bp CCCTCCTTCCCTCTTTCTCTTTCTTCCTTCCGTCTTCTTCCATTAAATATTAATCTTATCTTTCCACCTTaGTACCTTCAGCACATCCAG +
Preference number: 2 (lower is better)
Translates to: PSFPLSLSSFRLLPLNINLIFPP*YLQHIQ
Trigger: CTGGATGTGCTGAAGGTAGCAAGGTGGAAAGATAAG...ATTAATATTTAATGGAAGAAGACGGAAGGAAGAAAGAGAAAGAGGGAAGGAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR-3UTR GCA 90 bp CCCTCCTTCCCTCTTTCTCTTTCTTCCTTCCGTCTTCTTCCATTAAATATTAATTACCAAGGACCCCTCTaGTTCTTATCTTTCCACCTT +
Preference number: 2 (lower is better)
Translates to: PSFPLSLSSFRLLPLNINYQGPL*FLSFHL
Trigger: AAGGTGGAAAGATAAGAAGCAGAGGGGTCCTTGGTA...ATTAATATTTAATGGAAGAAGACGGAAGGAAGAAAGAGAAAGAGGGAAGGAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR-3UTR GCA 90 bp ACCAAGTTGGACATTACGCATGGAAGAAAAGCAAACCCGCCTTTTGGTAAACGGGATAAGAATGAATCTTaGTTGAGGAAATGTACGATC +
Preference number: 2 (lower is better)
Translates to: TKLDITHGRKANPPFGKRDKNES*LRKCTI
Trigger: GATCGTACATTTCCTCAAGCAAGATTCATTCTTATC...CCGTTTACCAAAAGGCGGGTTTGCTTTTCTTCCATGCGTAATGTCCAACTTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR-3UTR CCA 90 bp CCCTCCTTCCCTCTTTCTCTTTCTTCCTTCCGTCTTCTTCCATTAAATATTAATGTAATCTTAGCACTCTaGAATGCTAAGGCAGGAGGA +
Preference number: 2 (lower is better)
Translates to: PSFPLSLSSFRLLPLNINVILAL*NAKAGG
Trigger: TCCTCCTGCCTTAGCATTCCAGAGTGCTAAGATTAC...ATTAATATTTAATGGAAGAAGACGGAAGGAAGAAAGAGAAAGAGGGAAGGAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR-3UTR CCA 90 bp TCCAAGGAATTTCTGTCCAGGACGATGGCACAGAGAATACAAATTTTATTTCATCTGGTGAAACTCTGCTaGAAACCAACTCACCAGCAA +
Preference number: 2 (lower is better)
Translates to: SKEFLSRTMAQRIQILFHLVKLC*KPTHQQ
Trigger: TTGCTGGTGAGTTGGTTTCCAGCAGAGTTTCACCAG...ATGAAATAAAATTTGTATTCTCTGTGCCATCGTCCTGGACAGAAATTCCTTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR-3UTR TCA 90 bp AATAGAAAGAACCAAGTTGGACATTACGCATGGAAGAAAAGCAAACCCGCCTTTTTACTAAAGAATTTCTaGCAGCCTTTAAGATGCGGC +
Preference number: 2 (lower is better)
Translates to: NRKNQVGHYAWKKSKPAFLLKNF*QPLRCG
Trigger: GCCGCATCTTAAAGGCTGTCAGAAATTCTTTAGTAA...AAAGGCGGGTTTGCTTTTCTTCCATGCGTAATGTCCAACTTGGTTCTTTCTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR-3UTR TCA 90 bp TCCAAGGAATTTCTGTCCAGGACGATGGCACAGAGAATACAAATTTTATTTCATATTAACCCTCTCTGGTaGAACTCTGCTGGAAACCAA +
Preference number: 2 (lower is better)
Translates to: SKEFLSRTMAQRIQILFHINPLW*NSAGNQ
Trigger: TTGGTTTCCAGCAGAGTTTCACCAGAGAGGGTTAAT...ATGAAATAAAATTTGTATTCTCTGTGCCATCGTCCTGGACAGAAATTCCTTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR-3UTR GCA 90 bp CCCTCCTTCCCTCTTTCTCTTTCTTCCTTCCGTCTTCTTCCATTAAATATTAATAGACAGTGTCACAGATaGCTTTGGAAACACAGTTTG +
Preference number: 2 (lower is better)
Translates to: PSFPLSLSSFRLLPLNINRQCHR*LWKHSL
Trigger: CAAACTGTGTTTCCAAAGGCATCTGTGACACTGTCT...ATTAATATTTAATGGAAGAAGACGGAAGGAAGAAAGAGAAAGAGGGAAGGAGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR-3UTR GCA 90 bp GGTGAAACTCTGCTGGAAACCAACTCACCAGCAATTGCCATTAATCTACTTACTTCTATTCGAGCGCAGTaGTGGTTAATATACATAATC +
Preference number: 2 (lower is better)
Translates to: GETLLETNSPAIAINLLTSIRAQ*WLIYII
Trigger: GATTATGTATATTAACCAGCACTGCGCTCGAATAGA...AGTAAGTAGATTAATGGCAATTGCTGGTGAGTTGGTTTCCAGCAGAGTTTCACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR-3UTR CCA 90 bp GAAGTATCTGATACCTGCTATTGCTATTCAATAGACTTTTATTCCTCCTGGGTCGCTTCTTGGAAGCTCTaGCTTGGAAAGATTAGCTTT +
Preference number: 2 (lower is better)
Translates to: EVSDTCYCYSIDFYSSWVASWKL*LGKISF
Trigger: AAAGCTAATCTTTCCAAGCCAGAGCTTCCAAGAAGC...GACCCAGGAGGAATAAAAGTCTATTGAATAGCAATAGCAGGTATCAGATACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649478.1
3UTR TCA 72 bp AGGCACCTTACACCAGGACGGCGAGGCCACTCTTTCTaGGGCCCCGTCTGCGCAGCCCAGGCTTCTGCTGGG +
Preference number: 3 (lower is better)
Translates to: RHLTPGRRGHSF*GPVCAAQASAG
Trigger: CCCAGCAGAAGCCTGGGCTGCGCAGACGGGGCCTCAGAAAGAGTGGCCTCGCCGTCCTGGTGTAAGGTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR-3UTR CAA 90 bp CAAGAGCACAGGGATGCCTGGGTCTGCAGCCATGGCTGGGCAGCTGCAGCTGCCGAGCACCACTCCTGCTaGTTCCTGGCTCCTGCCAGC +
Preference number: 3 (lower is better)
Translates to: QEHRDAWVCSHGWAAAAAEHHSC*FLAPAS
Trigger: GCTGGCAGGAGCCAGGAACAAGCAGGAGTGGTGCTC...GGCAGCTGCAGCTGCCCAGCCATGGCTGCAGACCCAGGCATCCCTGTGCTCTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR CCA 72 bp CAAGAGCACAGGGATGCCTGGGTCTGCAGCCATGGCTaGGCAGCTGCAGCTGCCTCTAGGAGCGTGGAGCTC +
Preference number: 3 (lower is better)
Translates to: QEHRDAWVCSHG*AAAAASRSVEL
Trigger: GAGCTCCACGCTCCTAGAGGCAGCTGCAGCTGCCCAGCCATGGCTGCAGACCCAGGCATCCCTGTGCTCTTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR CCA 72 bp CCCTCAGTGCCCCCTTGGCCTCCCTCCCATGCTTGTTaGCACCCAAACTCTGGAGGGGGCCAAGGCAGCAGA +
Preference number: 3 (lower is better)
Translates to: PSVPPWPPSHAC*HPNSGGGQGSR
Trigger: TCTGCTGCCTTGGCCCCCTCCAGAGTTTGGGTGCCAACAAGCATGGGAGGGAGGCCAAGGGGGCACTGAGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR-3UTR CAA 90 bp TGTGGTTGCCCCGGAGGTTCAGTGCGCCCCGCTCACCCAGCACCAGCCAGGGCTCCAAGGACTCTTCTTTaGGGGATTCCGACAACTTCC +
Preference number: 3 (lower is better)
Translates to: CGCPGGSVRPAHPAPARAPRTLL*GIPTTS
Trigger: GGAAGTTGTCGGAATCCCCAAAAGAAGAGTCCTTGG...AGCCCTGGCTGGTGCTGGGTGAGCGGGGCGCACTGAACCTCCGGGGCAACCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376501.7
3UTR TCA 72 bp AGGAGCGTGGAGCTCCCCCATCACCAACTCAGAAGGTaGGCACCACTCCTGCTTGTTCCTGGCTCCTGCCAG +
Preference number: 3 (lower is better)
Translates to: RSVELPHHQLRR*APLLLVPGSCQ
Trigger: CTGGCAGGAGCCAGGAACAAGCAGGAGTGGTGCTCACCTTCTGAGTTGGTGATGGGGGAGCTCCACGCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR GCA 72 bp CTCTTTCTGAGGCCCCGTCTGCGCAGCCCAGGCTTCTaGTGGGTTAATCAACAGTCTCTGCGGGGCTGCTCT +
Preference number: 3 (lower is better)
Translates to: LFLRPRLRSPGF*WVNQQSLRGCS
Trigger: AGAGCAGCCCCGCAGAGACTGTTGATTAACCCAGCAGAAGCCTGGGCTGCGCAGACGGGGCCTCAGAAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376501.7
3UTR CCA 72 bp ACCCAAACTCTGGAGGGGGCCAAGGCAGCAGAGGGCTaGTGTGTCAGCACCATCCCAAGCACACACACACCT +
Preference number: 3 (lower is better)
Translates to: TQTLEGAKAAEG*CVSTIPSTHTP
Trigger: AGGTGTGTGTGTGCTTGGGATGGTGCTGACACACCAGCCCTCTGCTGCCTTGGCCCCCTCCAGAGTTTGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR CCA 72 bp TCCACTCGGGAGCCTGTCGCTTCCTGCTGCTGTTCATaGTGCCCAGGCTGTTCATGCCAAGGGACACCTGCA +
Preference number: 3 (lower is better)
Translates to: STREPVASCCCS*CPGCSCQGTPA
Trigger: TGCAGGTGTCCCTTGGCATGAACAGCCTGGGCACCATGAACAGCAGCAGGAAGCGACAGGCTCCCGAGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR CCA 72 bp CTCACCCAGCACCAGCCAGGGCTTTCCTTAAAGGCGTaGAAAGGAGCGCGCACAAGGCGCGCATTGAGGTCT +
Preference number: 3 (lower is better)
Translates to: LTQHQPGLSLKA*KGARTRRALRS
Trigger: AGACCTCAATGCGCGCCTTGTGCGCGCTCCTTTCCACGCCTTTAAGGAAAGCCCTGGCTGGTGCTGGGTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR GCA 72 bp ACATCCCTTTCCACTCGGGAGCCTGTCGCTTCCTGCTaGTGTTCATGGTGCCCAGGCTGTTCATGCCAAGGG +
Preference number: 3 (lower is better)
Translates to: TSLSTREPVASC*CSWCPGCSCQG
Trigger: CCCTTGGCATGAACAGCCTGGGCACCATGAACAGCAGCAGGAAGCGACAGGCTCCCGAGTGGAAAGGGATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR GCA 72 bp GGCTTCTGCTGGGTTAATCAACAGTCTCTGCGGGGCTaGTCTGGCGCATGGAGGGCTCCTCCAAGGACTCTT +
Preference number: 3 (lower is better)
Translates to: GFCWVNQQSLRG*SGAWRAPPRTL
Trigger: AAGAGTCCTTGGAGGAGCCCTCCATGCGCCAGAGCAGCCCCGCAGAGACTGTTGATTAACCCAGCAGAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376501.7
3UTR CCA 72 bp CTGGTGTGTCAGCACCATCCCAAGCACACACACACCTaGCTGGGTCATAACAGCGCCTGGGCTTGGCCACAA +
Preference number: 3 (lower is better)
Translates to: LVCQHHPKHTHT*LGHNSAWAWPQ
Trigger: TTGTGGCCAAGCCCAGGCGCTGTTATGACCCAGCCAGGTGTGTGTGTGCTTGGGATGGTGCTGACACACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR-3UTR CAA 90 bp CAAGAGCACAGGGATGCCTGGGTCTGCAGCCATGGCTGGGCAGCTGCAGCTGCCTCTTATCTTTCCACCTaGCTACCTTCAGCACATCCA +
Preference number: 3 (lower is better)
Translates to: QEHRDAWVCSHGWAAAAASYLST*LPSAHP
Trigger: TGGATGTGCTGAAGGTAGCAAGGTGGAAAGATAAGA...GGCAGCTGCAGCTGCCCAGCCATGGCTGCAGACCCAGGCATCCCTGTGCTCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR GCA 72 bp GACACATCCCTTTCCACTCGGGAGCCTGTCGCTTCCTaGTGCTGTTCATGGTGCCCAGGCTGTTCATGCCAA +
Preference number: 3 (lower is better)
Translates to: DTSLSTREPVAS*CCSWCPGCSCQ
Trigger: TTGGCATGAACAGCCTGGGCACCATGAACAGCAGCAGGAAGCGACAGGCTCCCGAGTGGAAAGGGATGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR-3UTR CAA 90 bp GAAACAGAGCTCCCATACAAAGGGAGAGGACCCAAAGAGGGTAGCCCTCTATGTAGCTCTGGACCATGGTaGGGCCTGGGACATCCGGTG +
Preference number: 3 (lower is better)
Translates to: ETELPYKGRGPKEGSPLCSSGPW*GLGHPV
Trigger: CACCGGATGTCCCAGGCCCAACCATGGTCCAGAGCT...ACATAGAGGGCTACCCTCTTTGGGTCCTCTCCCTTTGTATGGGAGCTCTGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649478.1
3UTR CCA 72 bp TGTGTCAGCACCATCCCAAGCACACACACACCTGGCTaGGTCATAACAGCGCCTGGGCTTGGCCACAACTTT +
Preference number: 3 (lower is better)
Translates to: CVSTIPSTHTPG*VITAPGLGHNF
Trigger: AAAGTTGTGGCCAAGCCCAGGCGCTGTTATGACCCAGCCAGGTGTGTGTGTGCTTGGGATGGTGCTGACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR CCA 72 bp CTCTGCAGGCAGGTCATCCCCACTTCTGCCAGAGTCTaGCTGAGTCTAGGGTTTTTATGGGCTTCAGAGGGG +
Preference number: 3 (lower is better)
Translates to: LCRQVIPTSARV*LSLGFLWASEG
Trigger: CCCCTCTGAAGCCCATAAAAACCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGGATGACCTGCCTGCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR TCA 72 bp GCTGGAGTCATCTGGACGCTTCTCCACTCATATTTTTaGCTCCTGGGCTGGGGTGACTCAAAGGCTGGGCTC +
Preference number: 3 (lower is better)
Translates to: AGVIWTLLHSYF*LLGWGDSKAGL
Trigger: GAGCCCAGCCTTTGAGTCACCCCAGCCCAGGAGTCAAAAATATGAGTGGAGAAGCGTCCAGATGACTCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR GCA 72 bp TATCTCCCCTGCTGCAGCCGGCATCTTTGCAGCAGCTaGTCCAGACAGGCCACTGCTGAAATGATTACATGG +
Preference number: 3 (lower is better)
Translates to: YLPCCSRHLCSS*SRQATAEMITW
Trigger: CCATGTAATCATTTCAGCAGTGGCCTGTCTGGAGCAGCTGCTGCAAAGATGCCGGCTGCAGCAGGGGAGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR GCA 72 bp CTGGGTCATAACAGCGCCTGGGCTTGGCCACAACTTTaGTTCAAAATCAGAGTGGGTGCCAGGAGTGAGGAG +
Preference number: 3 (lower is better)
Translates to: LGHNSAWAWPQL*FKIRVGARSEE
Trigger: CTCCTCACTCCTGGCACCCACTCTGATTTTGAAGCAAAGTTGTGGCCAAGCCCAGGCGCTGTTATGACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR CCA 72 bp GAGGCCAGAGGCAGGGCAAGTCCAGGGTTACTTTCATaGCTCCATGACATTACCAAGGACCCCTCTGCTTCT +
Preference number: 3 (lower is better)
Translates to: EARGRASPGLLS*LHDITKDPSAS
Trigger: AGAAGCAGAGGGGTCCTTGGTAATGTCATGGAGCCATGAAAGTAACCCTGGACTTGCCCTGCCTCTGGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR CCA 72 bp ACACACACCTGGCTGGGTCATAACAGCGCCTGGGCTTaGCCACAACTTTGCTTCAAAATCAGAGTGGGTGCC +
Preference number: 3 (lower is better)
Translates to: THTWLGHNSAWA*PQLCFKIRVGA
Trigger: GGCACCCACTCTGATTTTGAAGCAAAGTTGTGGCCAAGCCCAGGCGCTGTTATGACCCAGCCAGGTGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR-3UTR CAA 90 bp CCTCTCTGCAGGCAGGTCATCCCCACTTCTGCCAGAGTCTGGCTGAGTCTAGGGTCTTATCTTTCCACCTaGCTACCTTCAGCACATCCA +
Preference number: 3 (lower is better)
Translates to: PLCRQVIPTSARVWLSLGSYLST*LPSAHP
Trigger: TGGATGTGCTGAAGGTAGCAAGGTGGAAAGATAAGA...CCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGGATGACCTGCCTGCAGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR CCA 72 bp CATCTGCTCAGCTCCCAGCTAAGAGAAGACCCACAGTaGGTAGCTCCTTTCTGCAGGCAGGTCATCCTGATA +
Preference number: 3 (lower is better)
Translates to: HLLSSQLREDPQ*VAPFCRQVILI
Trigger: TATCAGGATGACCTGCCTGCAGAAAGGAGCTACCCACTGTGGGTCTTCTCTTAGCTGGGAGCTGAGCAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673651.1
3UTR-3UTR CAA 90 bp CACAGCGCTATACCATCCCATGTACTTGCGTTGAAAAGAACACGTCTCTCTCCACGCACAAGGCGCGCATaGAGGTCTATTCGAGCGCAG +
Preference number: 3 (lower is better)
Translates to: HSAIPSHVLALKRTRLSPRTRRA*RSIRAQ
Trigger: CTGCGCTCGAATAGACCTCAATGCGCGCCTTGTGCG...TGGAGAGAGACGTGTTCTTTTCAACGCAAGTACATGGGATGGTATAGCGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR-3UTR CAA 90 bp CGGTGTCTGGCATTCCAGCAGAATCTTGGTTTGCATCCTTACCAGGAAGCAAAACCTGAATGGATGTGGTaGCCCCGGAGGTTCAGTGCG +
Preference number: 3 (lower is better)
Translates to: RCLAFQQNLGLHPYQEAKPEWMW*PRRFSA
Trigger: CGCACTGAACCTCCGGGGCAACCACATCCATTCAGG...TTTTGCTTCCTGGTAAGGATGCAAACCAAGATTCTGCTGGAATGCCAGACACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR GCA 72 bp AATAACTCCTCTCTGCAGGCAGGTCATCCCCACTTCTaGCAGAGTCTGGCTGAGTCTAGGGTTTTTATGGGC +
Preference number: 3 (lower is better)
Translates to: NNSSLQAGHPHF*QSLAESRVFMG
Trigger: GCCCATAAAAACCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGGATGACCTGCCTGCAGAGAGGAGTTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR CCA 72 bp TCATCTGGACGCTTCTCCACTCATATTTTTGACTCCTaGGCTGGGGTGACTCAAAGGCTGGGCTCAGATGAG +
Preference number: 3 (lower is better)
Translates to: SSGRFSTHIFDS*AGVTQRLGSDE
Trigger: CTCATCTGAGCCCAGCCTTTGAGTCACCCCAGCCCAGGAGTCAAAAATATGAGTGGAGAAGCGTCCAGATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR CCA 72 bp AAGCACACACACACCTGGCTGGGTCATAACAGCGCCTaGGCTTGGCCACAACTTTGCTTCAAAATCAGAGTG +
Preference number: 3 (lower is better)
Translates to: KHTHTWLGHNSA*AWPQLCFKIRV
Trigger: CACTCTGATTTTGAAGCAAAGTTGTGGCCAAGCCCAGGCGCTGTTATGACCCAGCCAGGTGTGTGTGTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR CCA 72 bp GAACTTAAGAATAAAATCCTCTCCAGCTCTGGACCATaGTTGGGCCTGGGACATCCGGTGGCTCAGAGCAGA +
Preference number: 3 (lower is better)
Translates to: ELKNKILSSSGP*LGLGHPVAQSR
Trigger: TCTGCTCTGAGCCACCGGATGTCCCAGGCCCAACCATGGTCCAGAGCTGGAGAGGATTTTATTCTTAAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649478.1
3UTR-3UTR CAA 90 bp CTGCTTGTTCCTGGCTCCTGCCAGCTTAGTAGAGTGTACAGCCCTGGCCATATCCTTTGGAAACACAGTTaGGCACAGAGTCACAGAGAT +
Preference number: 3 (lower is better)
Translates to: LLVPGSCQLSRVYSPGHILWKHS*AQSHRD
Trigger: ATCTCTGTGACTCTGTGCCAAACTGTGTTTCCAAAG...GATATGGCCAGGGCTGTACACTCTACTAAGCTGGCAGGAGCCAGGAACAAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR-3UTR CAA 90 bp CTGCTTGTTCCTGGCTCCTGCCAGCTTAGTAGAGTGTACAGCCCTGGCCATATCATCAGATTCCACCTCTaGATGGGAGAGAAACATTGC +
Preference number: 3 (lower is better)
Translates to: LLVPGSCQLSRVYSPGHIIRFHL*MGEKHC
Trigger: GCAATGTTTCTCTCCCATCAAGAGGTGGAATCTGAT...GATATGGCCAGGGCTGTACACTCTACTAAGCTGGCAGGAGCCAGGAACAAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR-3UTR CAA 90 bp GAAATGAAGCAGTTTGATATCACACCCAACCAGGAGGCTGCTTCCAAGGAATTTCCTGAATGGATGTGGTaGCCCCGGAGGTTCAGTGCG +
Preference number: 3 (lower is better)
Translates to: EMKQFDITPNQEAASKEFPEWMW*PRRFSA
Trigger: CGCACTGAACCTCCGGGGCAACCACATCCATTCAGG...AAATTCCTTGGAAGCAGCCTCCTGGTTGGGTGTGATATCAAACTGCTTCATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR-3UTR CAA 90 bp AACCAGGAGGCTGCTTCCAAGGAATTTCTGTCCAGGACGATGGCACAGAGAATATGTAGGGTTGATTGGTaGGTGGAAATGGCTGGCAGC +
Preference number: 3 (lower is better)
Translates to: NQEAASKEFLSRTMAQRICRVDW*VEMAGS
Trigger: GCTGCCAGCCATTTCCACCAACCAATCAACCCTACA...TATTCTCTGTGCCATCGTCCTGGACAGAAATTCCTTGGAAGCAGCCTCCTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR CCA 72 bp ACTTCTGCCAGAGTCTGGCTGAGTCTAGGGTTTTTATaGGCTTCAGAGGGGAGGAAGCTCATGCTGATTGGT +
Preference number: 3 (lower is better)
Translates to: TSARVWLSLGFL*ASEGRKLMLIG
Trigger: ACCAATCAGCATGAGCTTCCTCCCCTCTGAAGCCCATAAAAACCCTAGACTCAGCCAGACTCTGGCAGAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR TCA 72 bp AGGCAGGGCAAGTCCAGGGTTACTTTCATGGCTCCATaGCATTACCAAGGACCCCTCTGCTTCTTATCTTTC +
Preference number: 3 (lower is better)
Translates to: RQGKSRVTFMAP*HYQGPLCFLSF
Trigger: GAAAGATAAGAAGCAGAGGGGTCCTTGGTAATGTCATGGAGCCATGAAAGTAACCCTGGACTTGCCCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR GCA 72 bp CAGCTAAGAGAAGACCCACAGTGGGTAGCTCCTTTCTaGAGGCAGGTCATCCTGATATCTGTTCAGCTCTTA +
Preference number: 3 (lower is better)
Translates to: QLREDPQWVAPF*RQVILISVQLL
Trigger: TAAGAGCTGAACAGATATCAGGATGACCTGCCTGCAGAAAGGAGCTACCCACTGTGGGTCTTCTCTTAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673651.1
3UTR-3UTR CAA 90 bp TTGGTTTGCATCCTTACCAGGAAGCAAAACTCCAAAGAGTTTCCCTACTTACTACGCACAAGGCGCGCATaGAGGTCTATTCGAGCGCAG +
Preference number: 3 (lower is better)
Translates to: LVCILTRKQNSKEFPYLLRTRRA*RSIRAQ
Trigger: CTGCGCTCGAATAGACCTCAATGCGCGCCTTGTGCG...TAGTAAGTAGGGAAACTCTTTGGAGTTTTGCTTCCTGGTAAGGATGCAAACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR TCA 72 bp CTCCTTTGGAGACAGCGGCATATAGTGCATAGTAGATaGAGCTCGAATAACGCTCCACAGCGCTATACCATC +
Preference number: 3 (lower is better)
Translates to: LLWRQRHIVHSR*SSNNAPQRYTI
Trigger: GATGGTATAGCGCTGTGGAGCGTTATTCGAGCTTCATCTACTATGCACTATATGCCGCTGTCTCCAAAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR-3UTR CAA 90 bp TGTGTTTATCAGCAAGTCACTAAGGGCAGCCCTGATTCAAGGGAGGGGAATCAGCTTTGGAAACACAGTTaGGCACAGAGTCACAGAGAT +
Preference number: 3 (lower is better)
Translates to: CVYQQVTKGSPDSREGNQLWKHS*AQSHRD
Trigger: ATCTCTGTGACTCTGTGCCAAACTGTGTTTCCAAAG...CTGATTCCCCTCCCTTGAATCAGGGCTGCCCTTAGTGACTTGCTGATAAACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR-3UTR CAA 90 bp AACCAGGAGGCTGCTTCCAAGGAATTTCTGTCCAGGACGATGGCACAGAGAATACTGATGGGAGGAAATTaGAAAGAAGCGCCAAACTGT +
Preference number: 3 (lower is better)
Translates to: NQEAASKEFLSRTMAQRILMGGN*KEAPNC
Trigger: ACAGTTTGGCGCTTCTTTCAAATTTCCTCCCATCAG...TATTCTCTGTGCCATCGTCCTGGACAGAAATTCCTTGGAAGCAGCCTCCTGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR-3UTR CAA 90 bp ACCAGGAGGCTGCTTCCAAGGAATTTCTGTCCAGGACGATGGCACAGAGAATACATAGAAAGAACCAAGTaGGACATTACGCATGGAAGA +
Preference number: 3 (lower is better)
Translates to: TRRLLPRNFCPGRWHREYIERTK*DITHGR
Trigger: TCTTCCATGCGTAATGTCCAACTTGGTTCTTTCTAT...GTATTCTCTGTGCCATCGTCCTGGACAGAAATTCCTTGGAAGCAGCCTCCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR TCA 72 bp GCCCTGTGCCGGGGTAAGATAAGAATGAATCTTGCTTaGGGAAATGTACGATCTCCCTGTAGTCTTCATGAC +
Preference number: 3 (lower is better)
Translates to: ALCRGKIRMNLA*GNVRSPCSLHD
Trigger: GTCATGAAGACTACAGGGAGATCGTACATTTCCTCAAGCAAGATTCATTCTTATCTTACCCCGGCACAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR GCA 72 bp AGGCAAAGAGGTGCTTTATTGAGCAACAGTACAGCTTaGAGGAGATCTGAAGTGGGTAGCTCCTTTCTGCAA +
Preference number: 3 (lower is better)
Translates to: RQRGALLSNSTA*RRSEVGSSFLQ
Trigger: TTGCAGAAAGGAGCTACCCACTTCAGATCTCCTGCAAGCTGTACTGTTGCTCAATAAAGCACCTCTTTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673651.1
3UTR CCA 72 bp GAAGAAAAGCAAACCCGCCTTTTGGTAAACGGTGTCTaGCATTCCAGCAGAATCTTGGTTTGCATCCTTACC +
Preference number: 3 (lower is better)
Translates to: EEKQTRLLVNGV*HSSRILVCILT
Trigger: GGTAAGGATGCAAACCAAGATTCTGCTGGAATGCCAGACACCGTTTACCAAAAGGCGGGTTTGCTTTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR TCA 72 bp TCCCTTTTGGTGAAAGTTGAAGGGCTGCCTGATCACTaGCTACATCCACATGCTTACCGTCTATTGAAGATG +
Preference number: 3 (lower is better)
Translates to: SLLVKVEGLPDH*LHPHAYRLLKM
Trigger: CATCTTCAATAGACGGTAAGCATGTGGATGTAGTCAGTGATCAGGCAGCCCTTCAACTTTCACCAAAAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376501.7
3UTR TCA 72 bp CGCTCCACAGCGCTATACCATCCCATGTACTTGCGTTaGAAAGAACACGTCTCTCTCCAATTAAATCTTGTT +
Preference number: 3 (lower is better)
Translates to: RSTALYHPMYLR*KEHVSLQLNLV
Trigger: AACAAGATTTAATTGGAGAGAGACGTGTTCTTTTCAACGCAAGTACATGGGATGGTATAGCGCTGTGGAGCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR GCA 72 bp TTACCAAGGACCCCTCTGCTTCTTATCTTTCCACCTTaGTACCTTCAGCACATCCAGAGTATCTCAATGTTT +
Preference number: 3 (lower is better)
Translates to: LPRTPLLLIFPP*YLQHIQSISMF
Trigger: AAACATTGAGATACTCTGGATGTGCTGAAGGTAGCAAGGTGGAAAGATAAGAAGCAGAGGGGTCCTTGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR CCA 72 bp ATTTCATTTCCTCTGTTTCTTGTAGGGTTGATTGGTTaGTGGAAATGGCTGGCAGCCAGTTCTGGGAAAGAT +
Preference number: 3 (lower is better)
Translates to: ISFPLFLVGLIG*WKWLAASSGKD
Trigger: ATCTTTCCCAGAACTGGCTGCCAGCCATTTCCACCAACCAATCAACCCTACAAGAAACAGAGGAAATGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR-3UTR CAA 90 bp ACCAAGTTGGACATTACGCATGGAAGAAAAGCAAACCCGCCTTTTGGTAAACGGAAGAATGAATCTTGCTaGAGGAAATGTACGATCTCC +
Preference number: 3 (lower is better)
Translates to: TKLDITHGRKANPPFGKRKNESC*RKCTIS
Trigger: GGAGATCGTACATTTCCTCAAGCAAGATTCATTCTT...CCGTTTACCAAAAGGCGGGTTTGCTTTTCTTCCATGCGTAATGTCCAACTTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR-3UTR CAA 90 bp TATTCAATAGACTTTTATTCCTCCTGGGTCCCAGCATCTGTTAGCCTTTCCAAATCATTCTGTTCCAAGTaGGCTTCTTGGAAGCTCTGG +
Preference number: 3 (lower is better)
Translates to: YSIDFYSSWVPASVSLSKSFCSK*ASWKLW
Trigger: CCAGAGCTTCCAAGAAGCCAACTTGGAACAGAATGA...TTTGGAAAGGCTAACAGATGCTGGGACCCAGGAGGAATAAAAGTCTATTGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649478.1
3UTR CCA 72 bp CCCCTCTGTAAGTGGACTTTAGATTCAGGTGAACCTTaGTTCATGTACCATCTTTACCATCTACTACGTTTG +
Preference number: 3 (lower is better)
Translates to: PLCKWTLDSGEP*FMYHLYHLLRL
Trigger: CAAACGTAGTAGATGGTAAAGATGGTACATGAACCAAGGTTCACCTGAATCTAAAGTCCACTTACAGAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649478.1
3UTR-3UTR CAA 90 bp GAAGTATCTGATACCTGCTATTGCTATTCAATAGACTTTTATTCCTCCTGGGTCTTCCAAGTTGGCTTCTaGGAAGCTCTGGCTTGGAAA +
Preference number: 3 (lower is better)
Translates to: EVSDTCYCYSIDFYSSWVFQVGF*EALAWK
Trigger: TTTCCAAGCCAGAGCTTCCAAGAAGCCAACTTGGAA...GACCCAGGAGGAATAAAAGTCTATTGAATAGCAATAGCAGGTATCAGATACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649478.1
3UTR CCA 72 bp ACCTGCTATTGCTATTCAATAGACTTTTATTCCTCCTaGGTCCCAGCATCTGTTAGCCTTTCCAAATCAAAC +
Preference number: 3 (lower is better)
Translates to: TCYCYSIDFYSS*VPASVSLSKSN
Trigger: GTTTGATTTGGAAAGGCTAACAGATGCTGGGACCCAGGAGGAATAAAAGTCTATTGAATAGCAATAGCAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649478.1
3UTR-3UTR CAA 90 bp ACCTGCTATTGCTATTCAATAGACTTTTATTCCTCCTGGGTCCCAGCATCTGTTTCAGTCATTCCATTTTaGCTCCCATCAGTAGTTTGT +
Preference number: 3 (lower is better)
Translates to: TCYCYSIDFYSSWVPASVSVIPF*LPSVVC
Trigger: ACAAACTACTGATGGGAGCAAAAATGGAATGACTGA...AACAGATGCTGGGACCCAGGAGGAATAAAAGTCTATTGAATAGCAATAGCAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649478.1
3UTR-3UTR CAA 90 bp CTTCCAAGGAATTTCTGTCCAGGACGATGGCACAGAGAATACAAATTTTATTTCCATGCTTACCGTCTATaGAAGATGTACAATGACTTG +
Preference number: 3 (lower is better)
Translates to: LPRNFCPGRWHREYKFYFHAYRL*KMYNDL
Trigger: CAAGTCATTGTACATCTTCAATAGACGGTAAGCATG...GAAATAAAATTTGTATTCTCTGTGCCATCGTCCTGGACAGAAATTCCTTGGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376501.7
3UTR TCA 72 bp ATCTTGAAGGTTCAAGTTTCTATTAAAGTTCTGAAATaGAGCAGTTTGATATCACACCCAACCAGGAGGCTG +
Preference number: 3 (lower is better)
Translates to: ILKVQVSIKVLK*SSLISHPTRRL
Trigger: CAGCCTCCTGGTTGGGTGTGATATCAAACTGCTTCATTTCAGAACTTTAATAGAAACTTGAACCTTCAAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR GCA 72 bp ATGAGAAGAGATGCCATCGATGAAGTATCTGATACCTaGTATTGCTATTCAATAGACTTTTATTCCTCCTGG +
Preference number: 3 (lower is better)
Translates to: MRRDAIDEVSDT*YCYSIDFYSSW
Trigger: CCAGGAGGAATAAAAGTCTATTGAATAGCAATAGCAGGTATCAGATACTTCATCGATGGCATCTCTTCTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649478.1
CDS-3UTR CCA 90 bp TGTGGTTGCCCCGGAGGTTCAGTGCGCCCCGCTCACCCAGCACCAGCCAGGGCTCCACTCTTAGACGCCTaGGCTCTTCTGAGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: CGCPGGSVRPAHPAPARAPLLDA*ALLSPR
Trigger: CCGGGGACTCAGAAGAGCCCAGGCGTCTAAGAGTGG...AGCCCTGGCTGGTGCTGGGTGAGCGGGGCGCACTGAACCTCCGGGGCAACCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR TCA 90 bp CCTTACACCAGGACGGCGAGGCCACTCTTTCTGAGGCCCCGTCTGCGCAGCCCAAGTCCCCGGAGCTCCTaGATGGATGTGGTTGCCCCG +
Preference number: 4 (lower is better)
Translates to: PYTRTARPLFLRPRLRSPSPRSS*MDVVAP
Trigger: CGGGGCAACCACATCCATTCAGGAGCTCCGGGGACT...TGGGCTGCGCAGACGGGGCCTCAGAAAGAGTGGCCTCGCCGTCCTGGTGTAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR TCA 90 bp GGAGGCACCTTACACCAGGACGGCGAGGCCACTCTTTCTGAGGCCCCGTCTGCGACGCCTGGGCTCTTCTaGGTCCCCGGAGCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: GGTLHQDGEATLSEAPSATPGLF*VPGAPE
Trigger: TTCAGGAGCTCCGGGGACTCAGAAGAGCCCAGGCGT...CGCAGACGGGGCCTCAGAAAGAGTGGCCTCGCCGTCCTGGTGTAAGGTGCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp CAAGAGCACAGGGATGCCTGGGTCTGCAGCCATGGCTGGGCAGCTGCAGCTGCCTCCAGTCTGTGGAACTaGCAGCCTGGCCCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: QEHRDAWVCSHGWAAAAASSLWN*QPGPQA
Trigger: AGCCTGGGGGCCAGGCTGCCAGTTCCACAGACTGGA...GGCAGCTGCAGCTGCCCAGCCATGGCTGCAGACCCAGGCATCCCTGTGCTCTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR CAA 72 bp ACCCTCAGTGCCCCCTTGGCCTCCCTCCCATGCTTGTaGGCACCCAAACTCTGGAGGGGGCCAAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: TLSAPLASLPCL*APKLWRGPRQQ
Trigger: CTGCTGCCTTGGCCCCCTCCAGAGTTTGGGTGCCAACAAGCATGGGAGGGAGGCCAAGGGGGCACTGAGGGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR TCA 90 bp GGCGAGGCCACTCTTTCTGAGGCCCCGTCTGCGCAGCCCAGGCTTCTGCTGGGTCTGGGCCCCAGCAGATaGTACACTCATGGTCGCAGA +
Preference number: 4 (lower is better)
Translates to: GEATLSEAPSAQPRLLLGLGPSR*YTHGRR
Trigger: TCTGCGACCATGAGTGTATCATCTGCTGGGGCCCAG...ACCCAGCAGAAGCCTGGGCTGCGCAGACGGGGCCTCAGAAAGAGTGGCCTCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376501.7
CDS-3UTR CCA 90 bp TGTGGTTGCCCCGGAGGTTCAGTGCGCCCCGCTCACCCAGCACCAGCCAGGGCTTCAAAGCTGTGGTGCTaGGTGGAGACTTGGGCCATG +
Preference number: 4 (lower is better)
Translates to: CGCPGGSVRPAHPAPARASKLWC*VETWAM
Trigger: CATGGCCCAAGTCTCCACCCAGCACCACAGCTTTGA...AGCCCTGGCTGGTGCTGGGTGAGCGGGGCGCACTGAACCTCCGGGGCAACCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp AAAGTCCGTCCCTTCCCACTCTTAGACGCCTGGGCTCTTCTGAGTCCCCGGAGCTCTGCGGGGCTGCTCTaGCGCATGGAGGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: KVRPFPLLDAWALLSPRSSAGLL*RMEGSS
Trigger: GGAGGAGCCCTCCATGCGCCAGAGCAGCCCCGCAGA...GCTCCGGGGACTCAGAAGAGCCCAGGCGTCTAAGAGTGGGAAGGGACGGACTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR TCA 90 bp CAAGAGCACAGGGATGCCTGGGTCTGCAGCCATGGCTGGGCAGCTGCAGCTGCCAAGGCTGGGCTCAGATaGGCCTGGAGACCCAGTAGT +
Preference number: 4 (lower is better)
Translates to: QEHRDAWVCSHGWAAAAAKAGLR*AWRPSS
Trigger: ACTACTGGGTCTCCAGGCTCATCTGAGCCCAGCCTT...GGCAGCTGCAGCTGCCCAGCCATGGCTGCAGACCCAGGCATCCCTGTGCTCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR TCA 90 bp TTACACCAGGACGGCGAGGCCACTCTTTCTGAGGCCCCGTCTGCGCAGCCCAGGCTGGGCCCCAGCAGATaGTACACTCATGGTCGCAGA +
Preference number: 4 (lower is better)
Translates to: LHQDGEATLSEAPSAQPRLGPSR*YTHGRR
Trigger: TCTGCGACCATGAGTGTATCATCTGCTGGGGCCCAG...CCTGGGCTGCGCAGACGGGGCCTCAGAAAGAGTGGCCTCGCCGTCCTGGTGTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp CCTTACACCAGGACGGCGAGGCCACTCTTTCTGAGGCCCCGTCTGCGCAGCCCATGCTGGGTGGAGACTTaGGCCATGGGGACAAAGAGG +
Preference number: 4 (lower is better)
Translates to: PYTRTARPLFLRPRLRSPCWVET*AMGTKR
Trigger: CCTCTTTGTCCCCATGGCCCAAGTCTCCACCCAGCA...TGGGCTGCGCAGACGGGGCCTCAGAAAGAGTGGCCTCGCCGTCCTGGTGTAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR GCA 90 bp CAAGAGCACAGGGATGCCTGGGTCTGCAGCCATGGCTGGGCAGCTGCAGCTGCCGGTCATCCCCACTTCTaGCAGAGTCTGGCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: QEHRDAWVCSHGWAAAAAGHPHF*QSLAES
Trigger: AGACTCAGCCAGACTCTGGCAGAAGTGGGGATGACC...GGCAGCTGCAGCTGCCCAGCCATGGCTGCAGACCCAGGCATCCCTGTGCTCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp GAAGGTGGAGCTTCACCAGCGACACATCCCTTTCCACTCGGGAGCCTGTCGCTTGTGGAACTGGCAGCCTaGCCCCCAGGCTTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: EGGASPATHPFPLGSLSLVELAA*PPGFRP
Trigger: TGGCCTGAAGCCTGGGGGCCAGGCTGCCAGTTCCAC...AAGCGACAGGCTCCCGAGTGGAAAGGGATGTGTCGCTGGTGAAGCTCCACCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp GGCGAGGCCACTCTTTCTGAGGCCCCGTCTGCGCAGCCCAGGCTTCTGCTGGGTTGGAGACTTGGGCCATaGGGACAAAGAGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: GEATLSEAPSAQPRLLLGWRLGP*GQRGFS
Trigger: AGAGAAGCCTCTTTGTCCCCATGGCCCAAGTCTCCA...ACCCAGCAGAAGCCTGGGCTGCGCAGACGGGGCCTCAGAAAGAGTGGCCTCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376501.7
CDS-3UTR CCA 90 bp GGCGAGGCCACTCTTTCTGAGGCCCCGTCTGCGCAGCCCAGGCTTCTGCTGGGTGGGTTGATTGGTTGGTaGAAATGGCTGGCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: GEATLSEAPSAQPRLLLGGLIGW*KWLAAS
Trigger: ACTGGCTGCCAGCCATTTCCACCAACCAATCAACCC...ACCCAGCAGAAGCCTGGGCTGCGCAGACGGGGCCTCAGAAAGAGTGGCCTCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376501.7
CDS-3UTR TCA 90 bp GAAGGTGGAGCTTCACCAGCGACACATCCCTTTCCACTCGGGAGCCTGTCGCTTACTCCTGGGCTGGGGTaGCTCAAAGGCTGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: EGGASPATHPFPLGSLSLTPGLG*LKGWAQ
Trigger: CTGAGCCCAGCCTTTGAGTCACCCCAGCCCAGGAGT...AAGCGACAGGCTCCCGAGTGGAAAGGGATGTGTCGCTGGTGAAGCTCCACCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR TCA 90 bp CAAGAGCACAGGGATGCCTGGGTCTGCAGCCATGGCTGGGCAGCTGCAGCTGCCCACCAACTCAGAAGGTaGGCACCACTCCTGCTTGTT +
Preference number: 4 (lower is better)
Translates to: QEHRDAWVCSHGWAAAAAHQLRR*APLLLV
Trigger: AACAAGCAGGAGTGGTGCTCACCTTCTGAGTTGGTG...GGCAGCTGCAGCTGCCCAGCCATGGCTGCAGACCCAGGCATCCCTGTGCTCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR TCA 90 bp ATGGATGTGGTTGCCCCGGAGGTTCAGTGCGCCCCGCTCACCCAGCACCAGCCAGGGCTGCCTGATCACTaGCTACATCCACATGCTTAC +
Preference number: 4 (lower is better)
Translates to: MDVVAPEVQCAPLTQHQPGLPDH*LHPHAY
Trigger: GTAAGCATGTGGATGTAGTCAGTGATCAGGCAGCCC...TGGCTGGTGCTGGGTGAGCGGGGCGCACTGAACCTCCGGGGCAACCACATCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR GCA 90 bp GAAGGTGGAGCTTCACCAGCGACACATCCCTTTCCACTCGGGAGCCTGTCGCTTAGGGATGCCTGGGTCTaGAGCCATGGCTGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: EGGASPATHPFPLGSLSLRDAWV*SHGWAA
Trigger: AGCTGCCCAGCCATGGCTGCAGACCCAGGCATCCCT...AAGCGACAGGCTCCCGAGTGGAAAGGGATGTGTCGCTGGTGAAGCTCCACCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR GCA 90 bp CCTCTCTGCAGGCAGGTCATCCCCACTTCTGCCAGAGTCTGGCTGAGTCTAGGGTGCCCAGGCTGTTCATaGCAAGGGACACCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: PLCRQVIPTSARVWLSLGCPGCS*QGTPAG
Trigger: GCCTGCAGGTGTCCCTTGGCATGAACAGCCTGGGCA...CCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGGATGACCTGCCTGCAGAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR GCA 90 bp CCTCTCTGCAGGCAGGTCATCCCCACTTCTGCCAGAGTCTGGCTGAGTCTAGGGCCTGTCGCTTCCTGCTaGTGTTCATGGTGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: PLCRQVIPTSARVWLSLGPVASC*CSWCPG
Trigger: GCCTGGGCACCATGAACAGCAGCAGGAAGCGACAGG...CCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGGATGACCTGCCTGCAGAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp CAAGAGCACAGGGATGCCTGGGTCTGCAGCCATGGCTGGGCAGCTGCAGCTGCCAGAGAAGACCCACAGTaGGTAGCTCCTTTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: QEHRDAWVCSHGWAAAAAREDPQ*VAPFCR
Trigger: CCTGCAGAAAGGAGCTACCCACTGTGGGTCTTCTCT...GGCAGCTGCAGCTGCCCAGCCATGGCTGCAGACCCAGGCATCCCTGTGCTCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673651.1
CDS-3UTR GCA 90 bp GAGGCAGGGCAAGTCCAGGGTTACTTTCATGGCTCCATGACATTACCAAGGACCCTGTGCCACCCTCAGTaGCCCCTTGGCCTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: EAGQVQGYFHGSMTLPRTLCHPQ*PLGLPP
Trigger: GGGAGGGAGGCCAAGGGGGCACTGAGGGTGGCACAG...GGTCCTTGGTAATGTCATGGAGCCATGAAAGTAACCCTGGACTTGCCCTGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp CCTCTCTGCAGGCAGGTCATCCCCACTTCTGCCAGAGTCTGGCTGAGTCTAGGGTGGCCTTGGCTTTCATaGCCTCCCAGCGTGTGCCAA +
Preference number: 4 (lower is better)
Translates to: PLCRQVIPTSARVWLSLGWPWLS*PPSVCQ
Trigger: TTGGCACACGCTGGGAGGCCATGAAAGCCAAGGCCA...CCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGGATGACCTGCCTGCAGAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp CTTCCCACTCTTAGACGCCTGGGCTCTTCTGAGTCCCCGGAGCTCCTGAATGGACCACTCTTAGACGCCTaGGCTCTTCTGAGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: LPTLRRLGSSESPELLNGPLLDA*ALLSPR
Trigger: CCGGGGACTCAGAAGAGCCCAGGCGTCTAAGAGTGG...TCCATTCAGGAGCTCCGGGGACTCAGAAGAGCCCAGGCGTCTAAGAGTGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR TCA 90 bp TTACACCAGGACGGCGAGGCCACTCTTTCTGAGGCCCCGTCTGCGCAGCCCAGGCCCATGTACTTGCGTTaGAAAGAACACGTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: LHQDGEATLSEAPSAQPRPMYLR*KEHVSL
Trigger: GAGAGAGACGTGTTCTTTTCAACGCAAGTACATGGG...CCTGGGCTGCGCAGACGGGGCCTCAGAAAGAGTGGCCTCGCCGTCCTGGTGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR TCA 90 bp GGCGAGGCCACTCTTTCTGAGGCCCCGTCTGCGCAGCCCAGGCTTCTGCTGGGTATTAACCCTCTCTGGTaGAACTCTGCTGGAAACCAA +
Preference number: 4 (lower is better)
Translates to: GEATLSEAPSAQPRLLLGINPLW*NSAGNQ
Trigger: TTGGTTTCCAGCAGAGTTTCACCAGAGAGGGTTAAT...ACCCAGCAGAAGCCTGGGCTGCGCAGACGGGGCCTCAGAAAGAGTGGCCTCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376501.7
CDS-3UTR CCA 90 bp GTATCCTTTCCGAGGGAGGCACCTTACACCAGGACGGCGAGGCCACTCTTTCTGTGGCCTTGGCTTTCATaGCCTCCCAGCGTGTGCCAA +
Preference number: 4 (lower is better)
Translates to: VSFPREAPYTRTARPLFLWPWLS*PPSVCQ
Trigger: TTGGCACACGCTGGGAGGCCATGAAAGCCAAGGCCA...CAGAAAGAGTGGCCTCGCCGTCCTGGTGTAAGGTGCCTCCCTCGGAAAGGATAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp CAAGAGCACAGGGATGCCTGGGTCTGCAGCCATGGCTGGGCAGCTGCAGCTGCCCAGAGCAATCTGTCCTaGGATGTTTTCAGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: QEHRDAWVCSHGWAAAAAQSNLS*DVFSCK
Trigger: CTTGCAGCTGAAAACATCCCAGGACAGATTGCTCTG...GGCAGCTGCAGCTGCCCAGCCATGGCTGCAGACCCAGGCATCCCTGTGCTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp CCCCACTTCTGCCAGAGTCTGGCTGAGTCTAGGGTTTTTATGGGCTTCAGAGGGGTCTGCAGCCATGGCTaGGCAGCTGCAGCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: PHFCQSLAESRVFMGFRGVCSHG*AAAAAS
Trigger: AGAGGCAGCTGCAGCTGCCCAGCCATGGCTGCAGAC...CCCTCTGAAGCCCATAAAAACCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp CCCCACTTCTGCCAGAGTCTGGCTGAGTCTAGGGTTTTTATGGGCTTCAGAGGGGAGCACAGGGATGCCTaGGTCTGCAGCCATGGCTGG +
Preference number: 4 (lower is better)
Translates to: PHFCQSLAESRVFMGFRGEHRDA*VCSHGW
Trigger: CCAGCCATGGCTGCAGACCCAGGCATCCCTGTGCTC...CCCTCTGAAGCCCATAAAAACCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp GAAGGTGGAGCTTCACCAGCGACACATCCCTTTCCACTCGGGAGCCTGTCGCTTCCCTCCCATGCTTGTTaGCACCCAAACTCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: EGGASPATHPFPLGSLSLPSHAC*HPNSGG
Trigger: CCCTCCAGAGTTTGGGTGCCAACAAGCATGGGAGGG...AAGCGACAGGCTCCCGAGTGGAAAGGGATGTGTCGCTGGTGAAGCTCCACCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp GGTCATCCCCACTTCTGCCAGAGTCTGGCTGAGTCTAGGGTTTTTATGGGCTTCGTGGAACTGGCAGCCTaGCCCCCAGGCTTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: GHPHFCQSLAESRVFMGFVELAA*PPGFRP
Trigger: TGGCCTGAAGCCTGGGGGCCAGGCTGCCAGTTCCAC...GAAGCCCATAAAAACCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGGATGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp CTGCTTGTTCCTGGCTCCTGCCAGCTTAGTAGAGTGTACAGCCCTGGCCATATCTCCAGTCTGTGGAACTaGCAGCCTGGCCCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: LLVPGSCQLSRVYSPGHISSLWN*QPGPQA
Trigger: AGCCTGGGGGCCAGGCTGCCAGTTCCACAGACTGGA...GATATGGCCAGGGCTGTACACTCTACTAAGCTGGCAGGAGCCAGGAACAAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp ATGGATGTGGTTGCCCCGGAGGTTCAGTGCGCCCCGCTCACCCAGCACCAGCCACTGGTGAAACTCTGCTaGAAACCAACTCACCAGCAA +
Preference number: 4 (lower is better)
Translates to: MDVVAPEVQCAPLTQHQPLVKLC*KPTHQQ
Trigger: TTGCTGGTGAGTTGGTTTCCAGCAGAGTTTCACCAG...TGGCTGGTGCTGGGTGAGCGGGGCGCACTGAACCTCCGGGGCAACCACATCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR GCA 90 bp CCCCACTTCTGCCAGAGTCTGGCTGAGTCTAGGGTTTTTATGGGCTTCAGAGGGATGCCAAGGGACACCTaGAGGCCTGTGCTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: PHFCQSLAESRVFMGFRGMPRDT*RPVLCH
Trigger: GTGGCACAGCACAGGCCTGCAGGTGTCCCTTGGCAT...CCCTCTGAAGCCCATAAAAACCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR GCA 90 bp ATGGATGTGGTTGCCCCGGAGGTTCAGTGCGCCCCGCTCACCCAGCACCAGCCATGTGTCAGCAAGCACTaGAAACTGACGAAACAGTGT +
Preference number: 4 (lower is better)
Translates to: MDVVAPEVQCAPLTQHQPCVSKH*KLTKQC
Trigger: ACACTGTTTCGTCAGTTTGCAGTGCTTGCTGACACA...TGGCTGGTGCTGGGTGAGCGGGGCGCACTGAACCTCCGGGGCAACCACATCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636213.3
CDS-3UTR CCA 90 bp CAAGAGCACAGGGATGCCTGGGTCTGCAGCCATGGCTGGGCAGCTGCAGCTGCCTGTCACAGATGCCTTTaGAAACACAGTTTGGCACAG +
Preference number: 4 (lower is better)
Translates to: QEHRDAWVCSHGWAAAAACHRCL*KHSLAQ
Trigger: CTGTGCCAAACTGTGTTTCCAAAGGCATCTGTGACA...GGCAGCTGCAGCTGCCCAGCCATGGCTGCAGACCCAGGCATCCCTGTGCTCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp CAAGAGCACAGGGATGCCTGGGTCTGCAGCCATGGCTGGGCAGCTGCAGCTGCCGTAATCTTAGCACTCTaGAATGCTAAGGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: QEHRDAWVCSHGWAAAAAVILAL*NAKAGG
Trigger: TCCTCCTGCCTTAGCATTCCAGAGTGCTAAGATTAC...GGCAGCTGCAGCTGCCCAGCCATGGCTGCAGACCCAGGCATCCCTGTGCTCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp CAAGAGCACAGGGATGCCTGGGTCTGCAGCCATGGCTGGGCAGCTGCAGCTGCCACTTCTGCCAGAGTCTaGCTGAGTCTAGGGTTTTTA +
Preference number: 4 (lower is better)
Translates to: QEHRDAWVCSHGWAAAAATSARV*LSLGFL
Trigger: TAAAAACCCTAGACTCAGCCAGACTCTGGCAGAAGT...GGCAGCTGCAGCTGCCCAGCCATGGCTGCAGACCCAGGCATCCCTGTGCTCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp GGAGGCACCTTACACCAGGACGGCGAGGCCACTCTTTCTGAGGCCCCGTCTGCGTTGGTAAACGGTGTCTaGCATTCCAGCAGAATCTTG +
Preference number: 4 (lower is better)
Translates to: GGTLHQDGEATLSEAPSALVNGV*HSSRIL
Trigger: CAAGATTCTGCTGGAATGCCAGACACCGTTTACCAA...CGCAGACGGGGCCTCAGAAAGAGTGGCCTCGCCGTCCTGGTGTAAGGTGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR TCA 90 bp CCCCACTTCTGCCAGAGTCTGGCTGAGTCTAGGGTTTTTATGGGCTTCAGAGGGGCATTTGCGGGGGCTTaGATTCCCGAGCTTCTCGCT +
Preference number: 4 (lower is better)
Translates to: PHFCQSLAESRVFMGFRGAFAGA*IPELLA
Trigger: AGCGAGAAGCTCGGGAATTCAAGCCCCCGCAAATGC...CCCTCTGAAGCCCATAAAAACCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR TCA 90 bp CCCCACTTCTGCCAGAGTCTGGCTGAGTCTAGGGTTTTTATGGGCTTCAGAGGGAAGGCTGGGCTCAGATaGGCCTGGAGACCCAGTAGT +
Preference number: 4 (lower is better)
Translates to: PHFCQSLAESRVFMGFRGKAGLR*AWRPSS
Trigger: ACTACTGGGTCTCCAGGCTCATCTGAGCCCAGCCTT...CCCTCTGAAGCCCATAAAAACCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR TCA 90 bp CAAGAGCACAGGGATGCCTGGGTCTGCAGCCATGGCTGGGCAGCTGCAGCTGCCAGGCCACTGCTGAAATaGTTACATGGTTTATGGATG +
Preference number: 4 (lower is better)
Translates to: QEHRDAWVCSHGWAAAAARPLLK*LHGLWM
Trigger: CATCCATAAACCATGTAATCATTTCAGCAGTGGCCT...GGCAGCTGCAGCTGCCCAGCCATGGCTGCAGACCCAGGCATCCCTGTGCTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR TCA 90 bp ACCAGGAGGCTGCTTCCAAGGAATTTCTGTCCAGGACGATGGCACAGAGAATACAGTCCCCGGAGCTCCTaGATGGATGTGGTTGCCCCG +
Preference number: 4 (lower is better)
Translates to: TRRLLPRNFCPGRWHREYSPRSS*MDVVAP
Trigger: CGGGGCAACCACATCCATTCAGGAGCTCCGGGGACT...GTATTCTCTGTGCCATCGTCCTGGACAGAAATTCCTTGGAAGCAGCCTCCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR GCA 90 bp CACAGAGTCACAGAGATCGTTAGCAGAGCAATCTGTCCTGGGATGTTTTCAGCTCTGTGCCACCCTCAGTaGCCCCTTGGCCTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: HRVTEIVSRAICPGMFSALCHPQ*PLGLPP
Trigger: GGGAGGGAGGCCAAGGGGGCACTGAGGGTGGCACAG...AGCTGAAAACATCCCAGGACAGATTGCTCTGCTAACGATCTCTGTGACTCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR GCA 90 bp CTTACTAAAGAATTTCTGACAGCCTTTAAGATGCGGCTAGGTGCCCTGTGCCGGCAGTCTCTGCGGGGCTaGTCTGGCGCATGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: LTKEFLTAFKMRLGALCRQSLRG*SGAWRA
Trigger: AGCCCTCCATGCGCCAGAGCAGCCCCGCAGAGACTG...CCGGCACAGGGCACCTAGCCGCATCTTAAAGGCTGTCAGAAATTCTTTAGTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR GCA 90 bp CTTCCCACTCTTAGACGCCTGGGCTCTTCTGAGTCCCCGGAGCTCCTGAATGGACGCAGCCCAGGCTTCTaGTGGGTTAATCAACAGTCT +
Preference number: 4 (lower is better)
Translates to: LPTLRRLGSSESPELLNGRSPGF*WVNQQS
Trigger: AGACTGTTGATTAACCCAGCAGAAGCCTGGGCTGCG...TCCATTCAGGAGCTCCGGGGACTCAGAAGAGCCCAGGCGTCTAAGAGTGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp TGTGTTTATCAGCAAGTCACTAAGGGCAGCCCTGATTCAAGGGAGGGGAATCAGCTGGGTCTGCAGCCATaGCTGGGCAGCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: CVYQQVTKGSPDSREGNQLGLQP*LGSCSC
Trigger: GCAGCTGCAGCTGCCCAGCCATGGCTGCAGACCCAG...CTGATTCCCCTCCCTTGAATCAGGGCTGCCCTTAGTGACTTGCTGATAAACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp CTGCTTGTTCCTGGCTCCTGCCAGCTTAGTAGAGTGTACAGCCCTGGCCATATCAAGGCAGCAGAGGGCTaGTGTGTCAGCACCATCCCA +
Preference number: 4 (lower is better)
Translates to: LLVPGSCQLSRVYSPGHIKAAEG*CVSTIP
Trigger: TGGGATGGTGCTGACACACCAGCCCTCTGCTGCCTT...GATATGGCCAGGGCTGTACACTCTACTAAGCTGGCAGGAGCCAGGAACAAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp CTTCCCACTCTTAGACGCCTGGGCTCTTCTGAGTCCCCGGAGCTCCTGAATGGACTTTCCTTAAAGGCGTaGAAAGGAGCGCGCACAAGG +
Preference number: 4 (lower is better)
Translates to: LPTLRRLGSSESPELLNGLSLKA*KGARTR
Trigger: CCTTGTGCGCGCTCCTTTCCACGCCTTTAAGGAAAG...TCCATTCAGGAGCTCCGGGGACTCAGAAGAGCCCAGGCGTCTAAGAGTGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp CTTCCCACTCTTAGACGCCTGGGCTCTTCTGAGTCCCCGGAGCTCCTGAATGGAATTGGTTGGTGGAAATaGCTGGCAGCCAGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: LPTLRRLGSSESPELLNGIGWWK*LAASSG
Trigger: CCCAGAACTGGCTGCCAGCCATTTCCACCAACCAAT...TCCATTCAGGAGCTCCGGGGACTCAGAAGAGCCCAGGCGTCTAAGAGTGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp GAAACAGAGCTCCCATACAAAGGGAGAGGACCCAAAGAGGGTAGCCCTCTATGTGCTCTGGACCATGGTTaGGCCTGGGACATCCGGTGG +
Preference number: 4 (lower is better)
Translates to: ETELPYKGRGPKEGSPLCALDHG*AWDIRW
Trigger: CCACCGGATGTCCCAGGCCCAACCATGGTCCAGAGC...ACATAGAGGGCTACCCTCTTTGGGTCCTCTCCCTTTGTATGGGAGCTCTGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649478.1
CDS-3UTR TCA 90 bp ACCAAGTTGGACATTACGCATGGAAGAAAAGCAAACCCGCCTTTTGGTAAACGGCGAGGCCACTCTTTCTaGGGCCCCGTCTGCGCAGCC +
Preference number: 4 (lower is better)
Translates to: TKLDITHGRKANPPFGKRRGHSF*GPVCAA
Trigger: GGCTGCGCAGACGGGGCCTCAGAAAGAGTGGCCTCG...CCGTTTACCAAAAGGCGGGTTTGCTTTTCTTCCATGCGTAATGTCCAACTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR GCA 90 bp GGCTCCATGACATTACCAAGGACCCCTCTGCTTCTTATCTTTCCACCTTGCTACTGGCCTCCCAGCGTGTaGCAAAGGTCCCCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: GSMTLPRTPLLLIFPPCYWPPSV*QRSPSR
Trigger: CCTTGAGGGGGACCTTTGGCACACGCTGGGAGGCCA...GTAGCAAGGTGGAAAGATAAGAAGCAGAGGGGTCCTTGGTAATGTCATGGAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR GCA 90 bp CCCCACTTCTGCCAGAGTCTGGCTGAGTCTAGGGTTTTTATGGGCTTCAGAGGGCATCTTTGCAGCAGCTaGTCCAGACAGGCCACTGCT +
Preference number: 4 (lower is better)
Translates to: PHFCQSLAESRVFMGFRGHLCSS*SRQATA
Trigger: AGCAGTGGCCTGTCTGGAGCAGCTGCTGCAAAGATG...CCCTCTGAAGCCCATAAAAACCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR GCA 90 bp CCCCACTTCTGCCAGAGTCTGGCTGAGTCTAGGGTTTTTATGGGCTTCAGAGGGTTGGCCTCCCTCCCATaGTTGTTGGCACCCAAACTC +
Preference number: 4 (lower is better)
Translates to: PHFCQSLAESRVFMGFRGLASLP*LLAPKL
Trigger: GAGTTTGGGTGCCAACAAGCATGGGAGGGAGGCCAA...CCCTCTGAAGCCCATAAAAACCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR GCA 90 bp GGCTCCATGACATTACCAAGGACCCCTCTGCTTCTTATCTTTCCACCTTGCTACTGCAGGCCTGTGCTGTaGCACCCTCAGTGCCCCCTT +
Preference number: 4 (lower is better)
Translates to: GSMTLPRTPLLLIFPPCYCRPVL*HPQCPL
Trigger: AAGGGGGCACTGAGGGTGGCACAGCACAGGCCTGCA...GTAGCAAGGTGGAAAGATAAGAAGCAGAGGGGTCCTTGGTAATGTCATGGAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR GCA 90 bp ACACAGTTTGGCACAGAGTCACAGAGATCGTTAGCAGAGCAATCTGTCCTGGGATGCAGGCCTGTGCTGTaGCACCCTCAGTGCCCCCTT +
Preference number: 4 (lower is better)
Translates to: TQFGTESQRSLAEQSVLGCRPVL*HPQCPL
Trigger: AAGGGGGCACTGAGGGTGGCACAGCACAGGCCTGCA...TCCCAGGACAGATTGCTCTGCTAACGATCTCTGTGACTCTGTGCCAAACTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR GCA 90 bp ACACAGTTTGGCACAGAGTCACAGAGATCGTTAGCAGAGCAATCTGTCCTGGGAACACCTGCAGGCCTGTaGTGTGCCACCCTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: TQFGTESQRSLAEQSVLGTPAGL*CATLSA
Trigger: GGCACTGAGGGTGGCACAGCACAGGCCTGCAGGTGT...TCCCAGGACAGATTGCTCTGCTAACGATCTCTGTGACTCTGTGCCAAACTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR GCA 90 bp GGTCATCCCCACTTCTGCCAGAGTCTGGCTGAGTCTAGGGTTTTTATGGGCTTCGAGCCTGTCGCTTCCTaGTGCTGTTCATGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: GHPHFCQSLAESRVFMGFEPVAS*CCSWCP
Trigger: TGGGCACCATGAACAGCAGCAGGAAGCGACAGGCTC...GAAGCCCATAAAAACCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGGATGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp CAAGAGCACAGGGATGCCTGGGTCTGCAGCCATGGCTGGGCAGCTGCAGCTGCCTGTTTGGTTTCACAGTaGCTGGTACATTCCTTTGAT +
Preference number: 4 (lower is better)
Translates to: QEHRDAWVCSHGWAAAAACLVSQ*LVHSFD
Trigger: ATCAAAGGAATGTACCAGCCACTGTGAAACCAAACA...GGCAGCTGCAGCTGCCCAGCCATGGCTGCAGACCCAGGCATCCCTGTGCTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp CTGCTTGTTCCTGGCTCCTGCCAGCTTAGTAGAGTGTACAGCCCTGGCCATATCCCCTACATTCCAGCCTaGGAGACAGTGAGATCCCTG +
Preference number: 4 (lower is better)
Translates to: LLVPGSCQLSRVYSPGHIPYIPA*ETVRSL
Trigger: CAGGGATCTCACTGTCTCCCAGGCTGGAATGTAGGG...GATATGGCCAGGGCTGTACACTCTACTAAGCTGGCAGGAGCCAGGAACAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp GAAGGTGGAGCTTCACCAGCGACACATCCCTTTCCACTCGGGAGCCTGTCGCTTAACAGCGCCTGGGCTTaGCCACAACTTTGCTTCAAA +
Preference number: 4 (lower is better)
Translates to: EGGASPATHPFPLGSLSLNSAWA*PQLCFK
Trigger: TTTGAAGCAAAGTTGTGGCCAAGCCCAGGCGCTGTT...AAGCGACAGGCTCCCGAGTGGAAAGGGATGTGTCGCTGGTGAAGCTCCACCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp CCCCACTTCTGCCAGAGTCTGGCTGAGTCTAGGGTTTTTATGGGCTTCAGAGGGAAGCACACACACACCTaGCTGGGTCATAACAGCGCC +
Preference number: 4 (lower is better)
Translates to: PHFCQSLAESRVFMGFRGKHTHT*LGHNSA
Trigger: GGCGCTGTTATGACCCAGCCAGGTGTGTGTGTGCTT...CCCTCTGAAGCCCATAAAAACCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp TGTGTTTATCAGCAAGTCACTAAGGGCAGCCCTGATTCAAGGGAGGGGAATCAGCCCTCAGTGCCCCCTTaGCCTCCCTCCCATGCTTGT +
Preference number: 4 (lower is better)
Translates to: CVYQQVTKGSPDSREGNQPSVPP*PPSHAC
Trigger: ACAAGCATGGGAGGGAGGCCAAGGGGGCACTGAGGG...CTGATTCCCCTCCCTTGAATCAGGGCTGCCCTTAGTGACTTGCTGATAAACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp GGCTCCATGACATTACCAAGGACCCCTCTGCTTCTTATCTTTCCACCTTGCTACCCCTCAGTGCCCCCTTaGCCTCCCTCCCATGCTTGT +
Preference number: 4 (lower is better)
Translates to: GSMTLPRTPLLLIFPPCYPSVPP*PPSHAC
Trigger: ACAAGCATGGGAGGGAGGCCAAGGGGGCACTGAGGG...GTAGCAAGGTGGAAAGATAAGAAGCAGAGGGGTCCTTGGTAATGTCATGGAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp CTGCTTGTTCCTGGCTCCTGCCAGCTTAGTAGAGTGTACAGCCCTGGCCATATCTCCTGCTGCTGTTCATaGTGCCCAGGCTGTTCATGC +
Preference number: 4 (lower is better)
Translates to: LLVPGSCQLSRVYSPGHISCCCS*CPGCSC
Trigger: GCATGAACAGCCTGGGCACCATGAACAGCAGCAGGA...GATATGGCCAGGGCTGTACACTCTACTAAGCTGGCAGGAGCCAGGAACAAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp TTTGATATCACACCCAACCAGGAGGCTGCTTCCAAGGAATTTCTGTCCAGGACGGGCTGCTCTGGCGCATaGAGGGCTCCTCCAAGGACT +
Preference number: 4 (lower is better)
Translates to: FDITPNQEAASKEFLSRTGCSGA*RAPPRT
Trigger: AGTCCTTGGAGGAGCCCTCCATGCGCCAGAGCAGCC...CGTCCTGGACAGAAATTCCTTGGAAGCAGCCTCCTGGTTGGGTGTGATATCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp ACGCATGGAAGAAAAGCAAACCCGCCTTTTGGTAAACGGTGTCTGGCATTCCAGCCCGGAGCTCCTGAATaGATGTGGTTGCCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: THGRKANPPFGKRCLAFQPGAPE*MWLPRR
Trigger: CCTCCGGGGCAACCACATCCATTCAGGAGCTCCGGG...CTGGAATGCCAGACACCGTTTACCAAAAGGCGGGTTTGCTTTTCTTCCATGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp GGAGGCACCTTACACCAGGACGGCGAGGCCACTCTTTCTGAGGCCCCGTCTGCGTTCTGTCCAGGACGATaGCACAGAGAATACAAATTT +
Preference number: 4 (lower is better)
Translates to: GGTLHQDGEATLSEAPSAFCPGR*HREYKF
Trigger: AAATTTGTATTCTCTGTGCCATCGTCCTGGACAGAA...CGCAGACGGGGCCTCAGAAAGAGTGGCCTCGCCGTCCTGGTGTAAGGTGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR TCA 90 bp CCTCTCTGCAGGCAGGTCATCCCCACTTCTGCCAGAGTCTGGCTGAGTCTAGGGTCAGATTCCACCTCTTaGTGGGAGAGAAACATTGCA +
Preference number: 4 (lower is better)
Translates to: PLCRQVIPTSARVWLSLGSDSTS*WERNIA
Trigger: TGCAATGTTTCTCTCCCATCAAGAGGTGGAATCTGA...CCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGGATGACCTGCCTGCAGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR TCA 90 bp ATGGATGTGGTTGCCCCGGAGGTTCAGTGCGCCCCGCTCACCCAGCACCAGCCAAGATGTACAATGACTTaGAGAGGATATAGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: MDVVAPEVQCAPLTQHQPRCTMT*RGYSCH
Trigger: ATGACAGCTATATCCTCTTCAAGTCATTGTACATCT...TGGCTGGTGCTGGGTGAGCGGGGCGCACTGAACCTCCGGGGCAACCACATCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR TCA 90 bp GTATCCTTTCCGAGGGAGGCACCTTACACCAGGACGGCGAGGCCACTCTTTCTGCCCATGTACTTGCGTTaGAAAGAACACGTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: VSFPREAPYTRTARPLFLPMYLR*KEHVSL
Trigger: GAGAGAGACGTGTTCTTTTCAACGCAAGTACATGGG...CAGAAAGAGTGGCCTCGCCGTCCTGGTGTAAGGTGCCTCCCTCGGAAAGGATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR TCA 90 bp GCCAGGGCTTTCCTTAAAGGCGTGGAAAGGAGCGCGCACAAGGCGCGCATTGAGATTAACCCTCTCTGGTaGAACTCTGCTGGAAACCAA +
Preference number: 4 (lower is better)
Translates to: ARAFLKGVERSAHKARIEINPLW*NSAGNQ
Trigger: TTGGTTTCCAGCAGAGTTTCACCAGAGAGGGTTAAT...CTCAATGCGCGCCTTGTGCGCGCTCCTTTCCACGCCTTTAAGGAAAGCCCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR GCA 90 bp CACAGAGTCACAGAGATCGTTAGCAGAGCAATCTGTCCTGGGATGTTTTCAGCTTGGCCTCCCAGCGTGTaGCAAAGGTCCCCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: HRVTEIVSRAICPGMFSAWPPSV*QRSPSR
Trigger: CCTTGAGGGGGACCTTTGGCACACGCTGGGAGGCCA...AGCTGAAAACATCCCAGGACAGATTGCTCTGCTAACGATCTCTGTGACTCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR GCA 90 bp ACACAGTTTGGCACAGAGTCACAGAGATCGTTAGCAGAGCAATCTGTCCTGGGAGGTGAGCACCACTCCTaGTTGTTCCTGGCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: TQFGTESQRSLAEQSVLGGEHHS*LFLAPA
Trigger: GGCAGGAGCCAGGAACAAGCAGGAGTGGTGCTCACC...TCCCAGGACAGATTGCTCTGCTAACGATCTCTGTGACTCTGTGCCAAACTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR GCA 90 bp CCTCTCTGCAGGCAGGTCATCCCCACTTCTGCCAGAGTCTGGCTGAGTCTAGGGGCTTGGCCACAACTTTaGTTCAAAATCAGAGTGGGT +
Preference number: 4 (lower is better)
Translates to: PLCRQVIPTSARVWLSLGAWPQL*FKIRVG
Trigger: ACCCACTCTGATTTTGAAGCAAAGTTGTGGCCAAGC...CCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGGATGACCTGCCTGCAGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR GCA 90 bp ACACAGTTTGGCACAGAGTCACAGAGATCGTTAGCAGAGCAATCTGTCCTGGGAATGCCAAGGGACACCTaGAGGCCTGTGCTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: TQFGTESQRSLAEQSVLGMPRDT*RPVLCH
Trigger: GTGGCACAGCACAGGCCTGCAGGTGTCCCTTGGCAT...TCCCAGGACAGATTGCTCTGCTAACGATCTCTGTGACTCTGTGCCAAACTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR GCA 90 bp ACACAGTTTGGCACAGAGTCACAGAGATCGTTAGCAGAGCAATCTGTCCTGGGATGCCCAGGCTGTTCATaGCAAGGGACACCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: TQFGTESQRSLAEQSVLGCPGCS*QGTPAG
Trigger: GCCTGCAGGTGTCCCTTGGCATGAACAGCCTGGGCA...TCCCAGGACAGATTGCTCTGCTAACGATCTCTGTGACTCTGTGCCAAACTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR GCA 90 bp ACCAGGAGGCTGCTTCCAAGGAATTTCTGTCCAGGACGATGGCACAGAGAATACCTGAATGGATGTGGTTaGCCCGGAGGTTCAGTGCGC +
Preference number: 4 (lower is better)
Translates to: TRRLLPRNFCPGRWHREYLNGCG*PGGSVR
Trigger: GCGCACTGAACCTCCGGGGCAACCACATCCATTCAG...GTATTCTCTGTGCCATCGTCCTGGACAGAAATTCCTTGGAAGCAGCCTCCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp GAAGGTGGAGCTTCACCAGCGACACATCCCTTTCCACTCGGGAGCCTGTCGCTTAGTCTAGGGTTTTTATaGGCTTCAGAGGGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: EGGASPATHPFPLGSLSLSLGFL*ASEGRK
Trigger: CTTCCTCCCCTCTGAAGCCCATAAAAACCCTAGACT...AAGCGACAGGCTCCCGAGTGGAAAGGGATGTGTCGCTGGTGAAGCTCCACCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp GGAGGCACCTTACACCAGGACGGCGAGGCCACTCTTTCTGAGGCCCCGTCTGCGGAGAGCTGGTTTCTTTaGCAAAAGATTCCATTTTGT +
Preference number: 4 (lower is better)
Translates to: GGTLHQDGEATLSEAPSAESWFL*QKIPFC
Trigger: ACAAAATGGAATCTTTTGCCAAAGAAACCAGCTCTC...CGCAGACGGGGCCTCAGAAAGAGTGGCCTCGCCGTCCTGGTGTAAGGTGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp CGCATTGAGGTCTATTCGAGCGCAGTGCTGGTTAATATACATAATCTGGAGAGATCTGCGGGGCTGCTCTaGCGCATGGAGGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RIEVYSSAVLVNIHNLERSAGLL*RMEGSS
Trigger: GGAGGAGCCCTCCATGCGCCAGAGCAGCCCCGCAGA...TCTCTCCAGATTATGTATATTAACCAGCACTGCGCTCGAATAGACCTCAATGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp CTTCCCACTCTTAGACGCCTGGGCTCTTCTGAGTCCCCGGAGCTCCTGAATGGAGTTGGACATTACGCATaGAAGAAAAGCAAACCCGCC +
Preference number: 4 (lower is better)
Translates to: LPTLRRLGSSESPELLNGVGHYA*KKSKPA
Trigger: GGCGGGTTTGCTTTTCTTCCATGCGTAATGTCCAAC...TCCATTCAGGAGCTCCGGGGACTCAGAAGAGCCCAGGCGTCTAAGAGTGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR TCA 90 bp CCCCACTTCTGCCAGAGTCTGGCTGAGTCTAGGGTTTTTATGGGCTTCAGAGGGTCACTGGAATCAGTTTaGGTGGCATGGTCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: PHFCQSLAESRVFMGFRGSLESV*VAWSVL
Trigger: CAGCACAGACCATGCCACTCAAACTGATTCCAGTGA...CCCTCTGAAGCCCATAAAAACCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR TCA 90 bp GCCAGGGCTTTCCTTAAAGGCGTGGAAAGGAGCGCGCACAAGGCGCGCATTGAGGCATCAGCTAACTGCTaGTTGAAGGATTTTCTCATC +
Preference number: 4 (lower is better)
Translates to: ARAFLKGVERSAHKARIEASANC*LKDFLI
Trigger: GATGAGAAAATCCTTCAATCAGCAGTTAGCTGATGC...CTCAATGCGCGCCTTGTGCGCGCTCCTTTCCACGCCTTTAAGGAAAGCCCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR TCA 90 bp CCCCACTTCTGCCAGAGTCTGGCTGAGTCTAGGGTTTTTATGGGCTTCAGAGGGGGGGTTGTTATCTCATaGATAAGAGGCCAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: PHFCQSLAESRVFMGFRGGVVIS*IRGQRQ
Trigger: CTGCCTCTGGCCTCTTATTCATGAGATAACAACCCC...CCCTCTGAAGCCCATAAAAACCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGG
53% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR GCA 90 bp CCCCACTTCTGCCAGAGTCTGGCTGAGTCTAGGGTTTTTATGGGCTTCAGAGGGAAGAGGAGAGCAGGCTaGCTAATAAGCTGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: PHFCQSLAESRVFMGFRGKRRAG*LISCLH
Trigger: GTGGAGACAGCTTATTAGGCAGCCTGCTCTCCTCTT...CCCTCTGAAGCCCATAAAAACCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR GCA 90 bp ATGGATGTGGTTGCCCCGGAGGTTCAGTGCGCCCCGCTCACCCAGCACCAGCCAATCTGTGCTAACTTTTaGGTAGATGAACTCAATTCT +
Preference number: 4 (lower is better)
Translates to: MDVVAPEVQCAPLTQHQPICANF*VDELNS
Trigger: AGAATTGAGTTCATCTACGCAAAAGTTAGCACAGAT...TGGCTGGTGCTGGGTGAGCGGGGCGCACTGAACCTCCGGGGCAACCACATCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR GCA 90 bp TGTGTTTATCAGCAAGTCACTAAGGGCAGCCCTGATTCAAGGGAGGGGAATCAGTGCAGCCGGCATCTTTaGAGCAGCTGCTCCAGACAG +
Preference number: 4 (lower is better)
Translates to: CVYQQVTKGSPDSREGNQCSRHL*SSCSRQ
Trigger: CTGTCTGGAGCAGCTGCTGCAAAGATGCCGGCTGCA...CTGATTCCCCTCCCTTGAATCAGGGCTGCCCTTAGTGACTTGCTGATAAACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR GCA 90 bp GGCTCCATGACATTACCAAGGACCCCTCTGCTTCTTATCTTTCCACCTTGCTACTGCAGCCGGCATCTTTaGAGCAGCTGCTCCAGACAG +
Preference number: 4 (lower is better)
Translates to: GSMTLPRTPLLLIFPPCYCSRHL*SSCSRQ
Trigger: CTGTCTGGAGCAGCTGCTGCAAAGATGCCGGCTGCA...GTAGCAAGGTGGAAAGATAAGAAGCAGAGGGGTCCTTGGTAATGTCATGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR GCA 90 bp TTGGAAACACAGTTTGGCACAGAGTCACAGAGATCGTTAGCAGAGCAATCTGTCAGGGATGCCTGGGTCTaGAGCCATGGCTGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: LETQFGTESQRSLAEQSVRDAWV*SHGWAA
Trigger: AGCTGCCCAGCCATGGCTGCAGACCCAGGCATCCCT...GACAGATTGCTCTGCTAACGATCTCTGTGACTCTGTGCCAAACTGTGTTTCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR GCA 90 bp TTGGAAACACAGTTTGGCACAGAGTCACAGAGATCGTTAGCAGAGCAATCTGTCACACCTGCAGGCCTGTaGTGTGCCACCCTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: LETQFGTESQRSLAEQSVTPAGL*CATLSA
Trigger: GGCACTGAGGGTGGCACAGCACAGGCCTGCAGGTGT...GACAGATTGCTCTGCTAACGATCTCTGTGACTCTGTGCCAAACTGTGTTTCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR GCA 90 bp CGGTGTCTGGCATTCCAGCAGAATCTTGGTTTGCATCCTTACCAGGAAGCAAAAGCCTCAAAGCTGTGGTaGTGGGTGGAGACTTGGGCC +
Preference number: 4 (lower is better)
Translates to: RCLAFQQNLGLHPYQEAKASKLW*WVETWA
Trigger: GGCCCAAGTCTCCACCCAGCACCACAGCTTTGAGGC...TTTTGCTTCCTGGTAAGGATGCAAACCAAGATTCTGCTGGAATGCCAGACACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR GCA 90 bp TGGCATTCCAGCAGAATCTTGGTTTGCATCCTTACCAGGAAGCAAAACTCCAAACAGTCTCTGCGGGGCTaGTCTGGCGCATGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: WHSSRILVCILTRKQNSKQSLRG*SGAWRA
Trigger: AGCCCTCCATGCGCCAGAGCAGCCCCGCAGAGACTG...TTTGGAGTTTTGCTTCCTGGTAAGGATGCAAACCAAGATTCTGCTGGAATGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp GAAGGTGGAGCTTCACCAGCGACACATCCCTTTCCACTCGGGAGCCTGTCGCTTCCAGGGTTACTTTCATaGCTCCATGACATTACCAAG +
Preference number: 4 (lower is better)
Translates to: EGGASPATHPFPLGSLSLPGLLS*LHDITK
Trigger: CTTGGTAATGTCATGGAGCCATGAAAGTAACCCTGG...AAGCGACAGGCTCCCGAGTGGAAAGGGATGTGTCGCTGGTGAAGCTCCACCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp CCTCTCTGCAGGCAGGTCATCCCCACTTCTGCCAGAGTCTGGCTGAGTCTAGGGTTTGGAAACACAGTTTaGCACAGAGTCACAGAGATC +
Preference number: 4 (lower is better)
Translates to: PLCRQVIPTSARVWLSLGFGNTV*HRVTEI
Trigger: GATCTCTGTGACTCTGTGCCAAACTGTGTTTCCAAA...CCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGGATGACCTGCCTGCAGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp GAAGGTGGAGCTTCACCAGCGACACATCCCTTTCCACTCGGGAGCCTGTCGCTTTGTCACAGATGCCTTTaGAAACACAGTTTGGCACAG +
Preference number: 4 (lower is better)
Translates to: EGGASPATHPFPLGSLSLCHRCL*KHSLAQ
Trigger: CTGTGCCAAACTGTGTTTCCAAAGGCATCTGTGACA...AAGCGACAGGCTCCCGAGTGGAAAGGGATGTGTCGCTGGTGAAGCTCCACCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp CCCCACTTCTGCCAGAGTCTGGCTGAGTCTAGGGTTTTTATGGGCTTCAGAGGGGCTTCAAAATCAGAGTaGGTGCCAGGAGTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: PHFCQSLAESRVFMGFRGASKSE*VPGVRR
Trigger: TCTCCTCACTCCTGGCACCCACTCTGATTTTGAAGC...CCCTCTGAAGCCCATAAAAACCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp TGTGTTTATCAGCAAGTCACTAAGGGCAGCCCTGATTCAAGGGAGGGGAATCAGAAGGCAGCAGAGGGCTaGTGTGTCAGCACCATCCCA +
Preference number: 4 (lower is better)
Translates to: CVYQQVTKGSPDSREGNQKAAEG*CVSTIP
Trigger: TGGGATGGTGCTGACACACCAGCCCTCTGCTGCCTT...CTGATTCCCCTCCCTTGAATCAGGGCTGCCCTTAGTGACTTGCTGATAAACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp TGTGTTTATCAGCAAGTCACTAAGGGCAGCCCTGATTCAAGGGAGGGGAATCAGCCCTCCCATGCTTGTTaGCACCCAAACTCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: CVYQQVTKGSPDSREGNQPSHAC*HPNSGG
Trigger: CCCTCCAGAGTTTGGGTGCCAACAAGCATGGGAGGG...CTGATTCCCCTCCCTTGAATCAGGGCTGCCCTTAGTGACTTGCTGATAAACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp GAGGCAGGGCAAGTCCAGGGTTACTTTCATGGCTCCATGACATTACCAAGGACCATGCTGATTGGTCAATaGGCAGCCATAGGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: EAGQVQGYFHGSMTLPRTMLIGQ*AAIGGP
Trigger: AGGCCCACCTATGGCTGCCCATTGACCAATCAGCAT...GGTCCTTGGTAATGTCATGGAGCCATGAAAGTAACCCTGGACTTGCCCTGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp ACGCATGGAAGAAAAGCAAACCCGCCTTTTGGTAAACGGTGTCTGGCATTCCAGGTGGCCTCAAAGCTGTaGTGCTGGGTGGAGACTTGG +
Preference number: 4 (lower is better)
Translates to: THGRKANPPFGKRCLAFQVASKL*CWVETW
Trigger: CCAAGTCTCCACCCAGCACCACAGCTTTGAGGCCAC...CTGGAATGCCAGACACCGTTTACCAAAAGGCGGGTTTGCTTTTCTTCCATGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp CCAGAGCCTACGATTCAGATACAGGCTCTTAACAAGGCCTTACTTGTAGTTAGGCCCGGAGCTCCTGAATaGATGTGGTTGCCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: PEPTIQIQALNKALLVVRPGAPE*MWLPRR
Trigger: CCTCCGGGGCAACCACATCCATTCAGGAGCTCCGGG...CCTAACTACAAGTAAGGCCTTGTTAAGAGCCTGTATCTGAATCGTAGGCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR CAA 72 bp TTAAAGGCGTGGAAAGGAGCGCGCACAAGGCGCGCATaGAGGTCTATTCGAGCGCAGTGCTGGTTAATATAC +
Preference number: 4 (lower is better)
Translates to: LKAWKGARTRRA*RSIRAQCWLIY
Trigger: GTATATTAACCAGCACTGCGCTCGAATAGACCTCAATGCGCGCCTTGTGCGCGCTCCTTTCCACGCCTTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR TCA 90 bp GGTCATCCCCACTTCTGCCAGAGTCTGGCTGAGTCTAGGGTTTTTATGGGCTTCGGGGTTGTTATCTCATaGATAAGAGGCCAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: GHPHFCQSLAESRVFMGFGVVIS*IRGQRQ
Trigger: CTGCCTCTGGCCTCTTATTCATGAGATAACAACCCC...GAAGCCCATAAAAACCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGGATGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR TCA 90 bp CCCCACTTCTGCCAGAGTCTGGCTGAGTCTAGGGTTTTTATGGGCTTCAGAGGGAGTTTAAGGCTACAGTaGGCTATGAGCACACCCTAC +
Preference number: 4 (lower is better)
Translates to: PHFCQSLAESRVFMGFRGSLRLQ*AMSTPY
Trigger: GTAGGGTGTGCTCATAGCTCACTGTAGCCTTAAACT...CCCTCTGAAGCCCATAAAAACCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR TCA 90 bp TTGGTTTGCATCCTTACCAGGAAGCAAAACTCCAAAGAGTTTCCCTACTTACTACGAGGCCACTCTTTCTaGGGCCCCGTCTGCGCAGCC +
Preference number: 4 (lower is better)
Translates to: LVCILTRKQNSKEFPYLLRGHSF*GPVCAA
Trigger: GGCTGCGCAGACGGGGCCTCAGAAAGAGTGGCCTCG...TAGTAAGTAGGGAAACTCTTTGGAGTTTTGCTTCCTGGTAAGGATGCAAACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR TCA 90 bp ACGGTGTCTGGCATTCCAGCAGAATCTTGGTTTGCATCCTTACCAGGAAGCAAAGCACAAGGCGCGCATTaGGGTCTATTCGAGCGCAGT +
Preference number: 4 (lower is better)
Translates to: TVSGIPAESWFASLPGSKAQGAH*GLFERS
Trigger: ACTGCGCTCGAATAGACCTCAATGCGCGCCTTGTGC...TTTGCTTCCTGGTAAGGATGCAAACCAAGATTCTGCTGGAATGCCAGACACCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR GCA 90 bp TGGCATTCCAGCAGAATCTTGGTTTGCATCCTTACCAGGAAGCAAAACTCCAAATGGCCTCCCAGCGTGTaGCAAAGGTCCCCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: WHSSRILVCILTRKQNSKWPPSV*QRSPSR
Trigger: CCTTGAGGGGGACCTTTGGCACACGCTGGGAGGCCA...TTTGGAGTTTTGCTTCCTGGTAAGGATGCAAACCAAGATTCTGCTGGAATGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636213.3
CDS-3UTR GCA 90 bp TTGGAAACACAGTTTGGCACAGAGTCACAGAGATCGTTAGCAGAGCAATCTGTCCCAAGAGCACAGGGATaGCTGGGTCTGCAGCCATGG +
Preference number: 4 (lower is better)
Translates to: LETQFGTESQRSLAEQSVPRAQG*LGLQPW
Trigger: CCATGGCTGCAGACCCAGGCATCCCTGTGCTCTTGG...GACAGATTGCTCTGCTAACGATCTCTGTGACTCTGTGCCAAACTGTGTTTCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR GCA 90 bp ACACAGTTTGGCACAGAGTCACAGAGATCGTTAGCAGAGCAATCTGTCCTGGGATTGGCCTCCCTCCCATaGTTGTTGGCACCCAAACTC +
Preference number: 4 (lower is better)
Translates to: TQFGTESQRSLAEQSVLGLASLP*LLAPKL
Trigger: GAGTTTGGGTGCCAACAAGCATGGGAGGGAGGCCAA...TCCCAGGACAGATTGCTCTGCTAACGATCTCTGTGACTCTGTGCCAAACTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR GCA 90 bp ACACAGTTTGGCACAGAGTCACAGAGATCGTTAGCAGAGCAATCTGTCCTGGGAGGTCATCCCCACTTCTaGCAGAGTCTGGCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: TQFGTESQRSLAEQSVLGGHPHF*QSLAES
Trigger: AGACTCAGCCAGACTCTGGCAGAAGTGGGGATGACC...TCCCAGGACAGATTGCTCTGCTAACGATCTCTGTGACTCTGTGCCAAACTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR GCA 90 bp CCAGAGCCTACGATTCAGATACAGGCTCTTAACAAGGCCTTACTTGTAGTTAGGGCCTCAAAGCTGTGGTaGTGGGTGGAGACTTGGGCC +
Preference number: 4 (lower is better)
Translates to: PEPTIQIQALNKALLVVRASKLW*WVETWA
Trigger: GGCCCAAGTCTCCACCCAGCACCACAGCTTTGAGGC...CCTAACTACAAGTAAGGCCTTGTTAAGAGCCTGTATCTGAATCGTAGGCTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp CACAGAGTCACAGAGATCGTTAGCAGAGCAATCTGTCCTGGGATGTTTTCAGCTTGGCCTTGGCTTTCATaGCCTCCCAGCGTGTGCCAA +
Preference number: 4 (lower is better)
Translates to: HRVTEIVSRAICPGMFSAWPWLS*PPSVCQ
Trigger: TTGGCACACGCTGGGAGGCCATGAAAGCCAAGGCCA...AGCTGAAAACATCCCAGGACAGATTGCTCTGCTAACGATCTCTGTGACTCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp GAAGGTGGAGCTTCACCAGCGACACATCCCTTTCCACTCGGGAGCCTGTCGCTTGAGTATCTCAATGTTTaGTTTCACAGTGGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: EGGASPATHPFPLGSLSLEYLNV*FHSGWY
Trigger: GTACCAGCCACTGTGAAACCAAACATTGAGATACTC...AAGCGACAGGCTCCCGAGTGGAAAGGGATGTGTCGCTGGTGAAGCTCCACCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp CTGCTTGTTCCTGGCTCCTGCCAGCTTAGTAGAGTGTACAGCCCTGGCCATATCCATATTTTTGACTCCTaGGCTGGGGTGACTCAAAGG +
Preference number: 4 (lower is better)
Translates to: LLVPGSCQLSRVYSPGHIHIFDS*AGVTQR
Trigger: CCTTTGAGTCACCCCAGCCCAGGAGTCAAAAATATG...GATATGGCCAGGGCTGTACACTCTACTAAGCTGGCAGGAGCCAGGAACAAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp TGTGTTTATCAGCAAGTCACTAAGGGCAGCCCTGATTCAAGGGAGGGGAATCAGAAGCACACACACACCTaGCTGGGTCATAACAGCGCC +
Preference number: 4 (lower is better)
Translates to: CVYQQVTKGSPDSREGNQKHTHT*LGHNSA
Trigger: GGCGCTGTTATGACCCAGCCAGGTGTGTGTGTGCTT...CTGATTCCCCTCCCTTGAATCAGGGCTGCCCTTAGTGACTTGCTGATAAACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp TGTGTTTATCAGCAAGTCACTAAGGGCAGCCCTGATTCAAGGGAGGGGAATCAGTCCTGCTGCTGTTCATaGTGCCCAGGCTGTTCATGC +
Preference number: 4 (lower is better)
Translates to: CVYQQVTKGSPDSREGNQSCCCS*CPGCSC
Trigger: GCATGAACAGCCTGGGCACCATGAACAGCAGCAGGA...CTGATTCCCCTCCCTTGAATCAGGGCTGCCCTTAGTGACTTGCTGATAAACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp CTTACTAAAGAATTTCTGACAGCCTTTAAGATGCGGCTAGGTGCCCTGTGCCGGGCTCCTGAATGGATGTaGTTGCCCCGGAGGTTCAGT +
Preference number: 4 (lower is better)
Translates to: LTKEFLTAFKMRLGALCRAPEWM*LPRRFS
Trigger: ACTGAACCTCCGGGGCAACCACATCCATTCAGGAGC...CCGGCACAGGGCACCTAGCCGCATCTTAAAGGCTGTCAGAAATTCTTTAGTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp AAAGTCCGTCCCTTCCCACTCTTAGACGCCTGGGCTCTTCTGAGTCCCCGGAGCTTCTGTCCAGGACGATaGCACAGAGAATACAAATTT +
Preference number: 4 (lower is better)
Translates to: KVRPFPLLDAWALLSPRSFCPGR*HREYKF
Trigger: AAATTTGTATTCTCTGTGCCATCGTCCTGGACAGAA...GCTCCGGGGACTCAGAAGAGCCCAGGCGTCTAAGAGTGGGAAGGGACGGACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR TCA 90 bp ACACAGTTTGGCACAGAGTCACAGAGATCGTTAGCAGAGCAATCTGTCCTGGGACACCAACTCAGAAGGTaGGCACCACTCCTGCTTGTT +
Preference number: 4 (lower is better)
Translates to: TQFGTESQRSLAEQSVLGHQLRR*APLLLV
Trigger: AACAAGCAGGAGTGGTGCTCACCTTCTGAGTTGGTG...TCCCAGGACAGATTGCTCTGCTAACGATCTCTGTGACTCTGTGCCAAACTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR TCA 90 bp GGCTCCATGACATTACCAAGGACCCCTCTGCTTCTTATCTTTCCACCTTGCTACTGTTCAGCTCTTAGCTaGGAGAAGACCCCACAGCGA +
Preference number: 4 (lower is better)
Translates to: GSMTLPRTPLLLIFPPCYCSALS*EKTPQR
Trigger: TCGCTGTGGGGTCTTCTCTCAGCTAAGAGCTGAACA...GTAGCAAGGTGGAAAGATAAGAAGCAGAGGGGTCCTTGGTAATGTCATGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR TCA 90 bp CAGATACAGGCTCTTAACAAGGCCTTACTTGTAGTTAGGGGAATAGAAAGAACCACGCCTGGGCTCTTCTaGGTCCCCGGAGCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: QIQALNKALLVVRGIERTTPGLF*VPGAPE
Trigger: TTCAGGAGCTCCGGGGACTCAGAAGAGCCCAGGCGT...GGTTCTTTCTATTCCCCTAACTACAAGTAAGGCCTTGTTAAGAGCCTGTATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR TCA 90 bp TTAAAGGCGTGGAAAGGAGCGCGCACAAGGCGCGCATTGAGGTCTATTCGAGCGAGAATGAATCTTGCTTaGGGAAATGTACGATCTCCC +
Preference number: 4 (lower is better)
Translates to: LKAWKGARTRRALRSIRARMNLA*GNVRSP
Trigger: GGGAGATCGTACATTTCCTCAAGCAAGATTCATTCT...CGCTCGAATAGACCTCAATGCGCGCCTTGTGCGCGCTCCTTTCCACGCCTTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR GCA 90 bp TCACACCCAACCAGGAGGCTGCTTCCAAGGAATTTCTGTCCAGGACGATGGCACTCTAGGATCCTGTCATaGAGAATGGTGAAGAGACTC +
Preference number: 4 (lower is better)
Translates to: SHPTRRLLPRNFCPGRWHSRILS*RMVKRL
Trigger: GAGTCTCTTCACCATTCTGCATGACAGGATCCTAGA...GTGCCATCGTCCTGGACAGAAATTCCTTGGAAGCAGCCTCCTGGTTGGGTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR GCA 90 bp CCCCACTTCTGCCAGAGTCTGGCTGAGTCTAGGGTTTTTATGGGCTTCAGAGGGCTTATCTTTCCACCTTaGTACCTTCAGCACATCCAG +
Preference number: 4 (lower is better)
Translates to: PHFCQSLAESRVFMGFRGLIFPP*YLQHIQ
Trigger: CTGGATGTGCTGAAGGTAGCAAGGTGGAAAGATAAG...CCCTCTGAAGCCCATAAAAACCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR GCA 90 bp CACAGAGTCACAGAGATCGTTAGCAGAGCAATCTGTCCTGGGATGTTTTCAGCTCATCTTTGCAGCAGCTaGTCCAGACAGGCCACTGCT +
Preference number: 4 (lower is better)
Translates to: HRVTEIVSRAICPGMFSAHLCSS*SRQATA
Trigger: AGCAGTGGCCTGTCTGGAGCAGCTGCTGCAAAGATG...AGCTGAAAACATCCCAGGACAGATTGCTCTGCTAACGATCTCTGTGACTCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR GCA 90 bp AACACAGTTTGGCACAGAGTCACAGAGATCGTTAGCAGAGCAATCTGTCCTGGGTGCTGCTGTTCATGGTaGCCAGGCTGTTCATGCCAA +
Preference number: 4 (lower is better)
Translates to: NTVWHRVTEIVSRAICPGCCCSW*PGCSCQ
Trigger: TTGGCATGAACAGCCTGGGCACCATGAACAGCAGCA...CCCAGGACAGATTGCTCTGCTAACGATCTCTGTGACTCTGTGCCAAACTGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR GCA 90 bp AAAGTCCGTCCCTTCCCACTCTTAGACGCCTGGGCTCTTCTGAGTCCCCGGAGCATGGTCGTTCTAGACTaGACTAATAAGGGTTTTACT +
Preference number: 4 (lower is better)
Translates to: KVRPFPLLDAWALLSPRSMVVLD*TNKGFT
Trigger: AGTAAAACCCTTATTAGTGCAGTCTAGAACGACCAT...GCTCCGGGGACTCAGAAGAGCCCAGGCGTCTAAGAGTGGGAAGGGACGGACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR GCA 90 bp CCGCCTTTTGGTAAACGGTGTCTGGCATTCCAGCAGAATCTTGGTTTGCATCCTCGCAGCCCAGGCTTCTaGTGGGTTAATCAACAGTCT +
Preference number: 4 (lower is better)
Translates to: PPFGKRCLAFQQNLGLHPRSPGF*WVNQQS
Trigger: AGACTGTTGATTAACCCAGCAGAAGCCTGGGCTGCG...AGGATGCAAACCAAGATTCTGCTGGAATGCCAGACACCGTTTACCAAAAGGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR GCA 90 bp CCAGAGCCTACGATTCAGATACAGGCTCTTAACAAGGCCTTACTTGTAGTTAGGCTGAATGGATGTGGTTaGCCCGGAGGTTCAGTGCGC +
Preference number: 4 (lower is better)
Translates to: PEPTIQIQALNKALLVVRLNGCG*PGGSVR
Trigger: GCGCACTGAACCTCCGGGGCAACCACATCCATTCAG...CCTAACTACAAGTAAGGCCTTGTTAAGAGCCTGTATCTGAATCGTAGGCTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp CCCCACTTCTGCCAGAGTCTGGCTGAGTCTAGGGTTTTTATGGGCTTCAGAGGGCCAGGGTTACTTTCATaGCTCCATGACATTACCAAG +
Preference number: 4 (lower is better)
Translates to: PHFCQSLAESRVFMGFRGPGLLS*LHDITK
Trigger: CTTGGTAATGTCATGGAGCCATGAAAGTAACCCTGG...CCCTCTGAAGCCCATAAAAACCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp ACACAGTTTGGCACAGAGTCACAGAGATCGTTAGCAGAGCAATCTGTCCTGGGAATGCTGATTGGTCAATaGGCAGCCATAGGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: TQFGTESQRSLAEQSVLGMLIGQ*AAIGGP
Trigger: AGGCCCACCTATGGCTGCCCATTGACCAATCAGCAT...TCCCAGGACAGATTGCTCTGCTAACGATCTCTGTGACTCTGTGCCAAACTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp GGTCATCCCCACTTCTGCCAGAGTCTGGCTGAGTCTAGGGTTTTTATGGGCTTCAGTCTAGGGTTTTTATaGGCTTCAGAGGGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: GHPHFCQSLAESRVFMGFSLGFL*ASEGRK
Trigger: CTTCCTCCCCTCTGAAGCCCATAAAAACCCTAGACT...GAAGCCCATAAAAACCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGGATGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp ACGCATGGAAGAAAAGCAAACCCGCCTTTTGGTAAACGGTGTCTGGCATTCCAGCATGGTCGCAGAATGTaGCCTCAAAGCTGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: THGRKANPPFGKRCLAFQHGRRM*PQSCGA
Trigger: AGCACCACAGCTTTGAGGCCACATTCTGCGACCATG...CTGGAATGCCAGACACCGTTTACCAAAAGGCGGGTTTGCTTTTCTTCCATGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp GCAAACCCGCCTTTTGGTAAACGGTGTCTGGCATTCCAGCAGAATCTTGGTTTGCATGGTCGCAGAATGTaGCCTCAAAGCTGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: ANPPFGKRCLAFQQNLGLHGRRM*PQSCGA
Trigger: AGCACCACAGCTTTGAGGCCACATTCTGCGACCATG...CAAACCAAGATTCTGCTGGAATGCCAGACACCGTTTACCAAAAGGCGGGTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp AAAGAAGCGCCAAACTGTGTAACTGTAATTCAGCCAAGGACTGCTAAAACAAGGGGCTGCTCTGGCGCATaGAGGGCTCCTCCAAGGACT +
Preference number: 4 (lower is better)
Translates to: KEAPNCVTVIQPRTAKTRGCSGA*RAPPRT
Trigger: AGTCCTTGGAGGAGCCCTCCATGCGCCAGAGCAGCC...CCTTGTTTTAGCAGTCCTTGGCTGAATTACAGTTACACAGTTTGGCGCTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp AACGCTCCACAGCGCTATACCATCCCATGTACTTGCGTTGAAAAGAACACGTCTGCTCCTGAATGGATGTaGTTGCCCCGGAGGTTCAGT +
Preference number: 4 (lower is better)
Translates to: NAPQRYTIPCTCVEKNTSAPEWM*LPRRFS
Trigger: ACTGAACCTCCGGGGCAACCACATCCATTCAGGAGC...AGACGTGTTCTTTTCAACGCAAGTACATGGGATGGTATAGCGCTGTGGAGCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp GCAAACCCGCCTTTTGGTAAACGGTGTCTGGCATTCCAGCAGAATCTTGGTTTGGTTGGTGGAAATGGCTaGCAGCCAGTTCTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: ANPPFGKRCLAFQQNLGLVGGNG*QPVLGK
Trigger: CTTTCCCAGAACTGGCTGCCAGCCATTTCCACCAAC...CAAACCAAGATTCTGCTGGAATGCCAGACACCGTTTACCAAAAGGCGGGTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR CAA 72 bp TCTGGCGCATGGAGGGCTCCTCCAAGGACTCTTCTTTaGGGGATTCCGACAACTTCCCTTTTGGTGAAAGTT +
Preference number: 4 (lower is better)
Translates to: SGAWRAPPRTLL*GIPTTSLLVKV
Trigger: AACTTTCACCAAAAGGGAAGTTGTCGGAATCCCCAAAAGAAGAGTCCTTGGAGGAGCCCTCCATGCGCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376501.7
CDS-3UTR TCA 90 bp GGCTCCATGACATTACCAAGGACCCCTCTGCTTCTTATCTTTCCACCTTGCTACTCACTGGAATCAGTTTaGGTGGCATGGTCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: GSMTLPRTPLLLIFPPCYSLESV*VAWSVL
Trigger: CAGCACAGACCATGCCACTCAAACTGATTCCAGTGA...GTAGCAAGGTGGAAAGATAAGAAGCAGAGGGGTCCTTGGTAATGTCATGGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR TCA 90 bp CCGCCTTTTGGTAAACGGTGTCTGGCATTCCAGCAGAATCTTGGTTTGCATCCTTCACTGGAATCAGTTTaGGTGGCATGGTCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: PPFGKRCLAFQQNLGLHPSLESV*VAWSVL
Trigger: CAGCACAGACCATGCCACTCAAACTGATTCCAGTGA...AGGATGCAAACCAAGATTCTGCTGGAATGCCAGACACCGTTTACCAAAAGGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR TCA 90 bp ACGCATGGAAGAAAAGCAAACCCGCCTTTTGGTAAACGGTGTCTGGCATTCCAGTCACTGGAATCAGTTTaGGTGGCATGGTCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: THGRKANPPFGKRCLAFQSLESV*VAWSVL
Trigger: CAGCACAGACCATGCCACTCAAACTGATTCCAGTGA...CTGGAATGCCAGACACCGTTTACCAAAAGGCGGGTTTGCTTTTCTTCCATGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR TCA 90 bp GAGCTCCCATACAAAGGGAGAGGACCCAAAGAGGGTAGCCCTCTATGTGTATTATCACTGGAATCAGTTTaGGTGGCATGGTCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: ELPYKGRGPKEGSPLCVLSLESV*VAWSVL
Trigger: CAGCACAGACCATGCCACTCAAACTGATTCCAGTGA...TAATACACATAGAGGGCTACCCTCTTTGGGTCCTCTCCCTTTGTATGGGAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649478.1
CDS-3UTR TCA 90 bp CCCCACTTCTGCCAGAGTCTGGCTGAGTCTAGGGTTTTTATGGGCTTCAGAGGGCAGACAGGCCACTGCTaGAATGATTACATGGTTTAT +
Preference number: 4 (lower is better)
Translates to: PHFCQSLAESRVFMGFRGQTGHC*NDYMVY
Trigger: ATAAACCATGTAATCATTTCAGCAGTGGCCTGTCTG...CCCTCTGAAGCCCATAAAAACCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR TCA 90 bp CACAGAGTCACAGAGATCGTTAGCAGAGCAATCTGTCCTGGGATGTTTTCAGCTTGTTCAGCTCTTAGCTaGGAGAAGACCCCACAGCGA +
Preference number: 4 (lower is better)
Translates to: HRVTEIVSRAICPGMFSACSALS*EKTPQR
Trigger: TCGCTGTGGGGTCTTCTCTCAGCTAAGAGCTGAACA...AGCTGAAAACATCCCAGGACAGATTGCTCTGCTAACGATCTCTGTGACTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR TCA 90 bp ACCAGGAGGCTGCTTCCAAGGAATTTCTGTCCAGGACGATGGCACAGAGAATACTTCTCTCCCCTTGGCTaGTCTTGCAACCTTTACACT +
Preference number: 4 (lower is better)
Translates to: TRRLLPRNFCPGRWHREYFSPLG*SCNLYT
Trigger: AGTGTAAAGGTTGCAAGATCAGCCAAGGGGAGAGAA...GTATTCTCTGTGCCATCGTCCTGGACAGAAATTCCTTGGAAGCAGCCTCCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR TCA 90 bp TTTGATATCACACCCAACCAGGAGGCTGCTTCCAAGGAATTTCTGTCCAGGACGGCAAGCACTGCAAACTaGCGAAACAGTGTGTGCCTT +
Preference number: 4 (lower is better)
Translates to: FDITPNQEAASKEFLSRTASTAN*RNSVCL
Trigger: AAGGCACACACTGTTTCGTCAGTTTGCAGTGCTTGC...CGTCCTGGACAGAAATTCCTTGGAAGCAGCCTCCTGGTTGGGTGTGATATCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636213.3
CDS-3UTR GCA 90 bp GGCTCCATGACATTACCAAGGACCCCTCTGCTTCTTATCTTTCCACCTTGCTACAAGAGGAGAGCAGGCTaGCTAATAAGCTGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: GSMTLPRTPLLLIFPPCYKRRAG*LISCLH
Trigger: GTGGAGACAGCTTATTAGGCAGCCTGCTCTCCTCTT...GTAGCAAGGTGGAAAGATAAGAAGCAGAGGGGTCCTTGGTAATGTCATGGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR GCA 90 bp AAAGTCCGTCCCTTCCCACTCTTAGACGCCTGGGCTCTTCTGAGTCCCCGGAGCATCTGTGCTAACTTTTaGGTAGATGAACTCAATTCT +
Preference number: 4 (lower is better)
Translates to: KVRPFPLLDAWALLSPRSICANF*VDELNS
Trigger: AGAATTGAGTTCATCTACGCAAAAGTTAGCACAGAT...GCTCCGGGGACTCAGAAGAGCCCAGGCGTCTAAGAGTGGGAAGGGACGGACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR GCA 90 bp CACAGAGTCACAGAGATCGTTAGCAGAGCAATCTGTCCTGGGATGTTTTCAGCTTGCTGCTGTTCATGGTaGCCAGGCTGTTCATGCCAA +
Preference number: 4 (lower is better)
Translates to: HRVTEIVSRAICPGMFSACCCSW*PGCSCQ
Trigger: TTGGCATGAACAGCCTGGGCACCATGAACAGCAGCA...AGCTGAAAACATCCCAGGACAGATTGCTCTGCTAACGATCTCTGTGACTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR GCA 90 bp GTATCCTTTCCGAGGGAGGCACCTTACACCAGGACGGCGAGGCCACTCTTTCTGTCTATTCGAGCGCAGTaGTGGTTAATATACATAATC +
Preference number: 4 (lower is better)
Translates to: VSFPREAPYTRTARPLFLSIRAQ*WLIYII
Trigger: GATTATGTATATTAACCAGCACTGCGCTCGAATAGA...CAGAAAGAGTGGCCTCGCCGTCCTGGTGTAAGGTGCCTCCCTCGGAAAGGATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp AACACAGTTTGGCACAGAGTCACAGAGATCGTTAGCAGAGCAATCTGTCCTGGGGCTTCAAAATCAGAGTaGGTGCCAGGAGTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: NTVWHRVTEIVSRAICPGASKSE*VPGVRR
Trigger: TCTCCTCACTCCTGGCACCCACTCTGATTTTGAAGC...CCCAGGACAGATTGCTCTGCTAACGATCTCTGTGACTCTGTGCCAAACTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp TGTGTTTATCAGCAAGTCACTAAGGGCAGCCCTGATTCAAGGGAGGGGAATCAGAACAGCGCCTGGGCTTaGCCACAACTTTGCTTCAAA +
Preference number: 4 (lower is better)
Translates to: CVYQQVTKGSPDSREGNQNSAWA*PQLCFK
Trigger: TTTGAAGCAAAGTTGTGGCCAAGCCCAGGCGCTGTT...CTGATTCCCCTCCCTTGAATCAGGGCTGCCCTTAGTGACTTGCTGATAAACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp GGCTCCATGACATTACCAAGGACCCCTCTGCTTCTTATCTTTCCACCTTGCTACGAAGCTCATGCTGATTaGTCAATGGGCAGCCATAGG +
Preference number: 4 (lower is better)
Translates to: GSMTLPRTPLLLIFPPCYEAHAD*SMGSHR
Trigger: CCTATGGCTGCCCATTGACCAATCAGCATGAGCTTC...GTAGCAAGGTGGAAAGATAAGAAGCAGAGGGGTCCTTGGTAATGTCATGGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp GCCAGGGCTTTCCTTAAAGGCGTGGAAAGGAGCGCGCACAAGGCGCGCATTGAGACCTCAAAGAATTGCTaGTACATTCCTTTGATAACA +
Preference number: 4 (lower is better)
Translates to: ARAFLKGVERSAHKARIETSKNC*YIPLIT
Trigger: TGTTATCAAAGGAATGTACCAGCAATTCTTTGAGGT...CTCAATGCGCGCCTTGTGCGCGCTCCTTTCCACGCCTTTAAGGAAAGCCCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp CGCATTGAGGTCTATTCGAGCGCAGTGCTGGTTAATATACATAATCTGGAGAGAGTGGCCTCAAAGCTGTaGTGCTGGGTGGAGACTTGG +
Preference number: 4 (lower is better)
Translates to: RIEVYSSAVLVNIHNLERVASKL*CWVETW
Trigger: CCAAGTCTCCACCCAGCACCACAGCTTTGAGGCCAC...TCTCTCCAGATTATGTATATTAACCAGCACTGCGCTCGAATAGACCTCAATGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp CCGCCTTTTGGTAAACGGTGTCTGGCATTCCAGCAGAATCTTGGTTTGCATCCTAGCCCAGGCTTCTGCTaGGTTAATCAACAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: PPFGKRCLAFQQNLGLHPSPGFC*VNQQSL
Trigger: CAGAGACTGTTGATTAACCCAGCAGAAGCCTGGGCT...AGGATGCAAACCAAGATTCTGCTGGAATGCCAGACACCGTTTACCAAAAGGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp ACCTGCTATTGCTATTCAATAGACTTTTATTCCTCCTGGGTCCCAGCATCTGTTGACCATGGTTGGGCCTaGGACATCCGGTGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: TCYCYSIDFYSSWVPASVDHGWA*DIRWLR
Trigger: TCTGAGCCACCGGATGTCCCAGGCCCAACCATGGTC...AACAGATGCTGGGACCCAGGAGGAATAAAAGTCTATTGAATAGCAATAGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649478.1
3UTR CAA 72 bp AGAGCAGGTAAGTGGGAGACAGTGTCACAGATGCCTTaGGAAACACAGTTTGGCACAGAGTCACAGAGATCG +
Preference number: 4 (lower is better)
Translates to: RAGKWETVSQMP*ETQFGTESQRS
Trigger: CGATCTCTGTGACTCTGTGCCAAACTGTGTTTCCAAAGGCATCTGTGACACTGTCTCCCACTTACCTGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
3UTR CAA 72 bp GCCCTGATTCAAGGGAGGGGAATCAGATTCCACCTCTaGATGGGAGAGAAACATTGCACAAGAGCAGGTAAG +
Preference number: 4 (lower is better)
Translates to: ALIQGRGIRFHL*MGEKHCTRAGK
Trigger: CTTACCTGCTCTTGTGCAATGTTTCTCTCCCATCAAGAGGTGGAATCTGATTCCCCTCCCTTGAATCAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR TCA 90 bp AAAGAAGCGCCAAACTGTGTAACTGTAATTCAGCCAAGGACTGCTAAAACAAGGGCATTTGCGGGGGCTTaGATTCCCGAGCTTCTCGCT +
Preference number: 4 (lower is better)
Translates to: KEAPNCVTVIQPRTAKTRAFAGA*IPELLA
Trigger: AGCGAGAAGCTCGGGAATTCAAGCCCCCGCAAATGC...CCTTGTTTTAGCAGTCCTTGGCTGAATTACAGTTACACAGTTTGGCGCTTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR TCA 90 bp CCCTCCTTCCCTCTTTCTCTTTCTTCCTTCCGTCTTCTTCCATTAAATATTAATACTCCTGGGCTGGGGTaGCTCAAAGGCTGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: PSFPLSLSSFRLLPLNINTPGLG*LKGWAQ
Trigger: CTGAGCCCAGCCTTTGAGTCACCCCAGCCCAGGAGT...ATTAATATTTAATGGAAGAAGACGGAAGGAAGAAAGAGAAAGAGGGAAGGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR TCA 90 bp TGTGTTTATCAGCAAGTCACTAAGGGCAGCCCTGATTCAAGGGAGGGGAATCAGAGTTTAAGGCTACAGTaGGCTATGAGCACACCCTAC +
Preference number: 4 (lower is better)
Translates to: CVYQQVTKGSPDSREGNQSLRLQ*AMSTPY
Trigger: GTAGGGTGTGCTCATAGCTCACTGTAGCCTTAAACT...CTGATTCCCCTCCCTTGAATCAGGGCTGCCCTTAGTGACTTGCTGATAAACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR TCA 90 bp CACAAGGCGCGCATTGAGGTCTATTCGAGCGCAGTGCTGGTTAATATACATAATGGGCTGCCTGATCACTaGCTACATCCACATGCTTAC +
Preference number: 4 (lower is better)
Translates to: HKARIEVYSSAVLVNIHNGLPDH*LHPHAY
Trigger: GTAAGCATGTGGATGTAGTCAGTGATCAGGCAGCCC...ATTATGTATATTAACCAGCACTGCGCTCGAATAGACCTCAATGCGCGCCTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR TCA 90 bp GAAACAGAGCTCCCATACAAAGGGAGAGGACCCAAAGAGGGTAGCCCTCTATGTTACTACGTTTGCCCATaGGGAAGTTACTTAACCACC +
Preference number: 4 (lower is better)
Translates to: ETELPYKGRGPKEGSPLCYYVCP*GSYLTT
Trigger: GGTGGTTAAGTAACTTCCTCATGGGCAAACGTAGTA...ACATAGAGGGCTACCCTCTTTGGGTCCTCTCCCTTTGTATGGGAGCTCTGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649478.1
CDS-3UTR GCA 90 bp GAAACAGAGCTCCCATACAAAGGGAGAGGACCCAAAGAGGGTAGCCCTCTATGTTCTAGGATCCTGTCATaGAGAATGGTGAAGAGACTC +
Preference number: 4 (lower is better)
Translates to: ETELPYKGRGPKEGSPLCSRILS*RMVKRL
Trigger: GAGTCTCTTCACCATTCTGCATGACAGGATCCTAGA...ACATAGAGGGCTACCCTCTTTGGGTCCTCTCCCTTTGTATGGGAGCTCTGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649478.1
CDS-3UTR GCA 90 bp GAGGCAGGGCAAGTCCAGGGTTACTTTCATGGCTCCATGACATTACCAAGGACCAGACAGTGTCACAGATaGCTTTGGAAACACAGTTTG +
Preference number: 4 (lower is better)
Translates to: EAGQVQGYFHGSMTLPRTRQCHR*LWKHSL
Trigger: CAAACTGTGTTTCCAAAGGCATCTGTGACACTGTCT...GGTCCTTGGTAATGTCATGGAGCCATGAAAGTAACCCTGGACTTGCCCTGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR GCA 90 bp CCAGAGCCTACGATTCAGATACAGGCTCTTAACAAGGCCTTACTTGTAGTTAGGTTAATCAACAGTCTCTaGGGGGCTGCTCTGGCGCAT +
Preference number: 4 (lower is better)
Translates to: PEPTIQIQALNKALLVVRLINSL*GAALAH
Trigger: ATGCGCCAGAGCAGCCCCGCAGAGACTGTTGATTAA...CCTAACTACAAGTAAGGCCTTGTTAAGAGCCTGTATCTGAATCGTAGGCTCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR GCA 90 bp GTATCCTTTCCGAGGGAGGCACCTTACACCAGGACGGCGAGGCCACTCTTTCTGGATAAGAATGAATCTTaGTTGAGGAAATGTACGATC +
Preference number: 4 (lower is better)
Translates to: VSFPREAPYTRTARPLFLDKNES*LRKCTI
Trigger: GATCGTACATTTCCTCAAGCAAGATTCATTCTTATC...CAGAAAGAGTGGCCTCGCCGTCCTGGTGTAAGGTGCCTCCCTCGGAAAGGATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR GCA 90 bp AACGCTCCACAGCGCTATACCATCCCATGTACTTGCGTTGAAAAGAACACGTCTACCCAACCAGGAGGCTaGTTCCAAGGAATTTCTGTC +
Preference number: 4 (lower is better)
Translates to: NAPQRYTIPCTCVEKNTSTQPGG*FQGISV
Trigger: GACAGAAATTCCTTGGAAGCAGCCTCCTGGTTGGGT...AGACGTGTTCTTTTCAACGCAAGTACATGGGATGGTATAGCGCTGTGGAGCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR GCA 90 bp AACACAGTTTGGCACAGAGTCACAGAGATCGTTAGCAGAGCAATCTGTCCTGGGAGCAACAGTACAGCTTaGAGGAGATCTGAAGTGGGT +
Preference number: 4 (lower is better)
Translates to: NTVWHRVTEIVSRAICPGSNSTA*RRSEVG
Trigger: ACCCACTTCAGATCTCCTGCAAGCTGTACTGTTGCT...CCCAGGACAGATTGCTCTGCTAACGATCTCTGTGACTCTGTGCCAAACTGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673651.1
CDS-3UTR CCA 90 bp CAGATACAGGCTCTTAACAAGGCCTTACTTGTAGTTAGGGGAATAGAAAGAACCTGGCCTTGGCTTTCATaGCCTCCCAGCGTGTGCCAA +
Preference number: 4 (lower is better)
Translates to: QIQALNKALLVVRGIERTWPWLS*PPSVCQ
Trigger: TTGGCACACGCTGGGAGGCCATGAAAGCCAAGGCCA...GGTTCTTTCTATTCCCCTAACTACAAGTAAGGCCTTGTTAAGAGCCTGTATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp CCCCACTTCTGCCAGAGTCTGGCTGAGTCTAGGGTTTTTATGGGCTTCAGAGGGTGTTTGGTTTCACAGTaGCTGGTACATTCCTTTGAT +
Preference number: 4 (lower is better)
Translates to: PHFCQSLAESRVFMGFRGCLVSQ*LVHSFD
Trigger: ATCAAAGGAATGTACCAGCCACTGTGAAACCAAACA...CCCTCTGAAGCCCATAAAAACCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp AACACAGTTTGGCACAGAGTCACAGAGATCGTTAGCAGAGCAATCTGTCCTGGGCAGAGCAATCTGTCCTaGGATGTTTTCAGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: NTVWHRVTEIVSRAICPGQSNLS*DVFSCK
Trigger: CTTGCAGCTGAAAACATCCCAGGACAGATTGCTCTG...CCCAGGACAGATTGCTCTGCTAACGATCTCTGTGACTCTGTGCCAAACTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp TGTGTTTATCAGCAAGTCACTAAGGGCAGCCCTGATTCAAGGGAGGGGAATCAGACAAGAGCAGGTAAGTaGGAGACAGTGTCACAGATG +
Preference number: 4 (lower is better)
Translates to: CVYQQVTKGSPDSREGNQTRAGK*ETVSQM
Trigger: CATCTGTGACACTGTCTCCCACTTACCTGCTCTTGT...CTGATTCCCCTCCCTTGAATCAGGGCTGCCCTTAGTGACTTGCTGATAAACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp AACACAGTTTGGCACAGAGTCACAGAGATCGTTAGCAGAGCAATCTGTCCTGGGACAAGAGCAGGTAAGTaGGAGACAGTGTCACAGATG +
Preference number: 4 (lower is better)
Translates to: NTVWHRVTEIVSRAICPGTRAGK*ETVSQM
Trigger: CATCTGTGACACTGTCTCCCACTTACCTGCTCTTGT...CCCAGGACAGATTGCTCTGCTAACGATCTCTGTGACTCTGTGCCAAACTGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp CCCTCCTTCCCTCTTTCTCTTTCTTCCTTCCGTCTTCTTCCATTAAATATTAATGAGCACAGGGATGCCTaGGTCTGCAGCCATGGCTGG +
Preference number: 4 (lower is better)
Translates to: PSFPLSLSSFRLLPLNINEHRDA*VCSHGW
Trigger: CCAGCCATGGCTGCAGACCCAGGCATCCCTGTGCTC...ATTAATATTTAATGGAAGAAGACGGAAGGAAGAAAGAGAAAGAGGGAAGGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp GGTGAAACTCTGCTGGAAACCAACTCACCAGCAATTGCCATTAATCTACTTACTTGCTGGGTGGAGACTTaGGCCATGGGGACAAAGAGG +
Preference number: 4 (lower is better)
Translates to: GETLLETNSPAIAINLLTCWVET*AMGTKR
Trigger: CCTCTTTGTCCCCATGGCCCAAGTCTCCACCCAGCA...AGTAAGTAGATTAATGGCAATTGCTGGTGAGTTGGTTTCCAGCAGAGTTTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp GCAAACCCGCCTTTTGGTAAACGGTGTCTGGCATTCCAGCAGAATCTTGGTTTGCAAGGACTCTTCTTTTaGGGATTCCGACAACTTCCC +
Preference number: 4 (lower is better)
Translates to: ANPPFGKRCLAFQQNLGLQGLFF*GFRQLP
Trigger: GGGAAGTTGTCGGAATCCCCAAAAGAAGAGTCCTTG...CAAACCAAGATTCTGCTGGAATGCCAGACACCGTTTACCAAAAGGCGGGTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp CGGTGTCTGGCATTCCAGCAGAATCTTGGTTTGCATCCTTACCAGGAAGCAAAAAGCCCAGGCTTCTGCTaGGTTAATCAACAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: RCLAFQQNLGLHPYQEAKSPGFC*VNQQSL
Trigger: CAGAGACTGTTGATTAACCCAGCAGAAGCCTGGGCT...TTTTGCTTCCTGGTAAGGATGCAAACCAAGATTCTGCTGGAATGCCAGACACCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp ACGCATGGAAGAAAAGCAAACCCGCCTTTTGGTAAACGGTGTCTGGCATTCCAGCTGGTGAAACTCTGCTaGAAACCAACTCACCAGCAA +
Preference number: 4 (lower is better)
Translates to: THGRKANPPFGKRCLAFQLVKLC*KPTHQQ
Trigger: TTGCTGGTGAGTTGGTTTCCAGCAGAGTTTCACCAG...CTGGAATGCCAGACACCGTTTACCAAAAGGCGGGTTTGCTTTTCTTCCATGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp ACCAAGTTGGACATTACGCATGGAAGAAAAGCAAACCCGCCTTTTGGTAAACGGATTGGTTGGTGGAAATaGCTGGCAGCCAGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: TKLDITHGRKANPPFGKRIGWWK*LAASSG
Trigger: CCCAGAACTGGCTGCCAGCCATTTCCACCAACCAAT...CCGTTTACCAAAAGGCGGGTTTGCTTTTCTTCCATGCGTAATGTCCAACTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp TTTGATATCACACCCAACCAGGAGGCTGCTTCCAAGGAATTTCTGTCCAGGACGTCTTGTAGGGTTGATTaGTTGGTGGAAATGGCTGGC +
Preference number: 4 (lower is better)
Translates to: FDITPNQEAASKEFLSRTSCRVD*LVEMAG
Trigger: GCCAGCCATTTCCACCAACCAATCAACCCTACAAGA...CGTCCTGGACAGAAATTCCTTGGAAGCAGCCTCCTGGTTGGGTGTGATATCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp GAGCTCCCATACAAAGGGAGAGGACCCAAAGAGGGTAGCCCTCTATGTGTATTACATTCTGTTCCAAGTTaGCTTCTTGGAAGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: ELPYKGRGPKEGSPLCVLHSVPS*LLGSSG
Trigger: GCCAGAGCTTCCAAGAAGCCAACTTGGAACAGAATG...TAATACACATAGAGGGCTACCCTCTTTGGGTCCTCTCCCTTTGTATGGGAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649478.1
CDS-3UTR CCA 90 bp TATTCAATAGACTTTTATTCCTCCTGGGTCCCAGCATCTGTTAGCCTTTCCAAATCCAGCTCTGGACCATaGTTGGGCCTGGGACATCCG +
Preference number: 4 (lower is better)
Translates to: YSIDFYSSWVPASVSLSKSSSGP*LGLGHP
Trigger: CGGATGTCCCAGGCCCAACCATGGTCCAGAGCTGGA...TTTGGAAAGGCTAACAGATGCTGGGACCCAGGAGGAATAAAAGTCTATTGAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649478.1
CDS-3UTR TCA 90 bp TCCCATGTACTTGCGTTGAAAAGAACACGTCTCTCTCCAATTAAATCTTGTTCCGCATTTGCGGGGGCTTaGATTCCCGAGCTTCTCGCT +
Preference number: 4 (lower is better)
Translates to: SHVLALKRTRLSPIKSCSAFAGA*IPELLA
Trigger: AGCGAGAAGCTCGGGAATTCAAGCCCCCGCAAATGC...GGAACAAGATTTAATTGGAGAGAGACGTGTTCTTTTCAACGCAAGTACATGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR TCA 90 bp GGTCATCCCCACTTCTGCCAGAGTCTGGCTGAGTCTAGGGTTTTTATGGGCTTCTGGCATGGTCTGTGCTaGAAAAGCCAATCTTTAAAT +
Preference number: 4 (lower is better)
Translates to: GHPHFCQSLAESRVFMGFWHGLC*KSQSLN
Trigger: ATTTAAAGATTGGCTTTTTCAGCACAGACCATGCCA...GAAGCCCATAAAAACCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGGATGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR TCA 90 bp GAAACAGAGCTCCCATACAAAGGGAGAGGACCCAAAGAGGGTAGCCCTCTATGTTGTCATGCAGAATGGTaGAGAGACTCAAAGATTCCT +
Preference number: 4 (lower is better)
Translates to: ETELPYKGRGPKEGSPLCCHAEW*RDSKIP
Trigger: AGGAATCTTTGAGTCTCTTCACCATTCTGCATGACA...ACATAGAGGGCTACCCTCTTTGGGTCCTCTCCCTTTGTATGGGAGCTCTGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649478.1
CDS-3UTR TCA 90 bp GAAACAGAGCTCCCATACAAAGGGAGAGGACCCAAAGAGGGTAGCCCTCTATGTGCATCAGCTAACTGCTaGTTGAAGGATTTTCTCATC +
Preference number: 4 (lower is better)
Translates to: ETELPYKGRGPKEGSPLCASANC*LKDFLI
Trigger: GATGAGAAAATCCTTCAATCAGCAGTTAGCTGATGC...ACATAGAGGGCTACCCTCTTTGGGTCCTCTCCCTTTGTATGGGAGCTCTGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649478.1
CDS-3UTR TCA 90 bp AACACAGTTTGGCACAGAGTCACAGAGATCGTTAGCAGAGCAATCTGTCCTGGGTCAGATTCCACCTCTTaGTGGGAGAGAAACATTGCA +
Preference number: 4 (lower is better)
Translates to: NTVWHRVTEIVSRAICPGSDSTS*WERNIA
Trigger: TGCAATGTTTCTCTCCCATCAAGAGGTGGAATCTGA...CCCAGGACAGATTGCTCTGCTAACGATCTCTGTGACTCTGTGCCAAACTGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR TCA 90 bp GCAAACCCGCCTTTTGGTAAACGGTGTCTGGCATTCCAGCAGAATCTTGGTTTGAGCTCTGAAATGATCTaGAGCAGCCTCTCATTTTCC +
Preference number: 4 (lower is better)
Translates to: ANPPFGKRCLAFQQNLGLSSEMI*SSLSFS
Trigger: GGAAAATGAGAGGCTGCTTCAGATCATTTCAGAGCT...CAAACCAAGATTCTGCTGGAATGCCAGACACCGTTTACCAAAAGGCGGGTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR TCA 90 bp TTTGATATCACACCCAACCAGGAGGCTGCTTCCAAGGAATTTCTGTCCAGGACGCTTCAAGCTCTGAAATaGTCTGAAGCAGCCTCTCAT +
Preference number: 4 (lower is better)
Translates to: FDITPNQEAASKEFLSRTLQALK*SEAASH
Trigger: ATGAGAGGCTGCTTCAGATCATTTCAGAGCTTGAAG...CGTCCTGGACAGAAATTCCTTGGAAGCAGCCTCCTGGTTGGGTGTGATATCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR GCA 90 bp GGCTCCATGACATTACCAAGGACCCCTCTGCTTCTTATCTTTCCACCTTGCTACCTTATCTTTCCACCTTaGTACCTTCAGCACATCCAG +
Preference number: 4 (lower is better)
Translates to: GSMTLPRTPLLLIFPPCYLIFPP*YLQHIQ
Trigger: CTGGATGTGCTGAAGGTAGCAAGGTGGAAAGATAAG...GTAGCAAGGTGGAAAGATAAGAAGCAGAGGGGTCCTTGGTAATGTCATGGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR GCA 90 bp ACACAGTTTGGCACAGAGTCACAGAGATCGTTAGCAGAGCAATCTGTCCTGGGATACCAAGGACCCCTCTaGTTCTTATCTTTCCACCTT +
Preference number: 4 (lower is better)
Translates to: TQFGTESQRSLAEQSVLGYQGPL*FLSFHL
Trigger: AAGGTGGAAAGATAAGAAGCAGAGGGGTCCTTGGTA...TCCCAGGACAGATTGCTCTGCTAACGATCTCTGTGACTCTGTGCCAAACTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR GCA 90 bp AACACAGTTTGGCACAGAGTCACAGAGATCGTTAGCAGAGCAATCTGTCCTGGGTACCAAGGACCCCTCTaGTTCTTATCTTTCCACCTT +
Preference number: 4 (lower is better)
Translates to: NTVWHRVTEIVSRAICPGYQGPL*FLSFHL
Trigger: AAGGTGGAAAGATAAGAAGCAGAGGGGTCCTTGGTA...CCCAGGACAGATTGCTCTGCTAACGATCTCTGTGACTCTGTGCCAAACTGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR GCA 90 bp CCCTCCTTCCCTCTTTCTCTTTCTTCCTTCCGTCTTCTTCCATTAAATATTAATGGTGAGCACCACTCCTaGTTGTTCCTGGCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: PSFPLSLSSFRLLPLNINGEHHS*LFLAPA
Trigger: GGCAGGAGCCAGGAACAAGCAGGAGTGGTGCTCACC...ATTAATATTTAATGGAAGAAGACGGAAGGAAGAAAGAGAAAGAGGGAAGGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR GCA 90 bp CCCTCCTTCCCTCTTTCTCTTTCTTCCTTCCGTCTTCTTCCATTAAATATTAATCCAAGAGCACAGGGATaGCTGGGTCTGCAGCCATGG +
Preference number: 4 (lower is better)
Translates to: PSFPLSLSSFRLLPLNINPRAQG*LGLQPW
Trigger: CCATGGCTGCAGACCCAGGCATCCCTGTGCTCTTGG...ATTAATATTTAATGGAAGAAGACGGAAGGAAGAAAGAGAAAGAGGGAAGGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR GCA 90 bp CGCATTGAGGTCTATTCGAGCGCAGTGCTGGTTAATATACATAATCTGGAGAGATTAATCAACAGTCTCTaGGGGGCTGCTCTGGCGCAT +
Preference number: 4 (lower is better)
Translates to: RIEVYSSAVLVNIHNLERLINSL*GAALAH
Trigger: ATGCGCCAGAGCAGCCCCGCAGAGACTGTTGATTAA...TCTCTCCAGATTATGTATATTAACCAGCACTGCGCTCGAATAGACCTCAATGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR GCA 90 bp CAGATACAGGCTCTTAACAAGGCCTTACTTGTAGTTAGGGGAATAGAAAGAACCCGGCTAGGTGCCCTGTaGCGGGGTAAGATAAGAATG +
Preference number: 4 (lower is better)
Translates to: QIQALNKALLVVRGIERTRLGAL*RGKIRM
Trigger: CATTCTTATCTTACCCCGGCACAGGGCACCTAGCCG...GGTTCTTTCTATTCCCCTAACTACAAGTAAGGCCTTGTTAAGAGCCTGTATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR GCA 90 bp AAAGAAGCGCCAAACTGTGTAACTGTAATTCAGCCAAGGACTGCTAAAACAAGGCGGCTAGGTGCCCTGTaGCGGGGTAAGATAAGAATG +
Preference number: 4 (lower is better)
Translates to: KEAPNCVTVIQPRTAKTRRLGAL*RGKIRM
Trigger: CATTCTTATCTTACCCCGGCACAGGGCACCTAGCCG...CCTTGTTTTAGCAGTCCTTGGCTGAATTACAGTTACACAGTTTGGCGCTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR GCA 90 bp GAAACAGAGCTCCCATACAAAGGGAGAGGACCCAAAGAGGGTAGCCCTCTATGTCTCTGCCTCTTCATCTaGAAACTGAACTGTGAGAAT +
Preference number: 4 (lower is better)
Translates to: ETELPYKGRGPKEGSPLCLCLFI*KLNCEN
Trigger: ATTCTCACAGTTCAGTTTGCAGATGAAGAGGCAGAG...ACATAGAGGGCTACCCTCTTTGGGTCCTCTCCCTTTGTATGGGAGCTCTGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649478.1
CDS-3UTR CCA 90 bp GAGGCAGGGCAAGTCCAGGGTTACTTTCATGGCTCCATGACATTACCAAGGACCAACCCAAAATCTACCTaGAGGGATTTCATCATCTGT +
Preference number: 4 (lower is better)
Translates to: EAGQVQGYFHGSMTLPRTNPKST*RDFIIC
Trigger: ACAGATGATGAAATCCCTCCAGGTAGATTTTGGGTT...GGTCCTTGGTAATGTCATGGAGCCATGAAAGTAACCCTGGACTTGCCCTGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp AACACAGTTTGGCACAGAGTCACAGAGATCGTTAGCAGAGCAATCTGTCCTGGGGTAATCTTAGCACTCTaGAATGCTAAGGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: NTVWHRVTEIVSRAICPGVILAL*NAKAGG
Trigger: TCCTCCTGCCTTAGCATTCCAGAGTGCTAAGATTAC...CCCAGGACAGATTGCTCTGCTAACGATCTCTGTGACTCTGTGCCAAACTGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp GGCTCCATGACATTACCAAGGACCCCTCTGCTTCTTATCTTTCCACCTTGCTACACTTCTGCCAGAGTCTaGCTGAGTCTAGGGTTTTTA +
Preference number: 4 (lower is better)
Translates to: GSMTLPRTPLLLIFPPCYTSARV*LSLGFL
Trigger: TAAAAACCCTAGACTCAGCCAGACTCTGGCAGAAGT...GTAGCAAGGTGGAAAGATAAGAAGCAGAGGGGTCCTTGGTAATGTCATGGAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp CAGATACAGGCTCTTAACAAGGCCTTACTTGTAGTTAGGGGAATAGAAAGAACCTCAAAGCTGTGGTGCTaGGTGGAGACTTGGGCCATG +
Preference number: 4 (lower is better)
Translates to: QIQALNKALLVVRGIERTSKLWC*VETWAM
Trigger: CATGGCCCAAGTCTCCACCCAGCACCACAGCTTTGA...GGTTCTTTCTATTCCCCTAACTACAAGTAAGGCCTTGTTAAGAGCCTGTATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp ACCAGGAGGCTGCTTCCAAGGAATTTCTGTCCAGGACGATGGCACAGAGAATACTCTTCAACCACAGCTTaGTCTTCCTTTAAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: TRRLLPRNFCPGRWHREYSSTTA*SSFKAF
Trigger: GAAGGCTTTAAAGGAAGACCAAGCTGTGGTTGAAGA...GTATTCTCTGTGCCATCGTCCTGGACAGAAATTCCTTGGAAGCAGCCTCCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp ACCAGGAGGCTGCTTCCAAGGAATTTCTGTCCAGGACGATGGCACAGAGAATACATTCCAGCAGAATCTTaGTTTGCATCCTTACCAGGA +
Preference number: 4 (lower is better)
Translates to: TRRLLPRNFCPGRWHREYIPAES*FASLPG
Trigger: TCCTGGTAAGGATGCAAACCAAGATTCTGCTGGAAT...GTATTCTCTGTGCCATCGTCCTGGACAGAAATTCCTTGGAAGCAGCCTCCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp GATGAAGCTCGAATAACGCTCCACAGCGCTATACCATCCCATGTACTTGCGTTGTTGGTAAACGGTGTCTaGCATTCCAGCAGAATCTTG +
Preference number: 4 (lower is better)
Translates to: DEARITLHSAIPSHVLALLVNGV*HSSRIL
Trigger: CAAGATTCTGCTGGAATGCCAGACACCGTTTACCAA...CAACGCAAGTACATGGGATGGTATAGCGCTGTGGAGCGTTATTCGAGCTTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp GAAATGAAGCAGTTTGATATCACACCCAACCAGGAGGCTGCTTCCAAGGAATTTGTTGGTGGAAATGGCTaGCAGCCAGTTCTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: EMKQFDITPNQEAASKEFVGGNG*QPVLGK
Trigger: CTTTCCCAGAACTGGCTGCCAGCCATTTCCACCAAC...AAATTCCTTGGAAGCAGCCTCCTGGTTGGGTGTGATATCAAACTGCTTCATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp CGCATTGAGGTCTATTCGAGCGCAGTGCTGGTTAATATACATAATCTGGAGAGAGGGTTGATTGGTTGGTaGAAATGGCTGGCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: RIEVYSSAVLVNIHNLERGLIGW*KWLAAS
Trigger: ACTGGCTGCCAGCCATTTCCACCAACCAATCAACCC...TCTCTCCAGATTATGTATATTAACCAGCACTGCGCTCGAATAGACCTCAATGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp CGCATTGAGGTCTATTCGAGCGCAGTGCTGGTTAATATACATAATCTGGAGAGAGTAGGGTTGATTGGTTaGTGGAAATGGCTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: RIEVYSSAVLVNIHNLERVGLIG*WKWLAA
Trigger: GGCTGCCAGCCATTTCCACCAACCAATCAACCCTAC...TCTCTCCAGATTATGTATATTAACCAGCACTGCGCTCGAATAGACCTCAATGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR TCA 90 bp ACACAGTTTGGCACAGAGTCACAGAGATCGTTAGCAGAGCAATCTGTCCTGGGAGAGGAGGAAAAGCAGTaGACCCATCTAATAACTATG +
Preference number: 4 (lower is better)
Translates to: TQFGTESQRSLAEQSVLGEEEKQ*THLITM
Trigger: CATAGTTATTAGATGGGTTCACTGCTTTTCCTCCTC...TCCCAGGACAGATTGCTCTGCTAACGATCTCTGTGACTCTGTGCCAAACTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR TCA 90 bp CCGCCTTTTGGTAAACGGTGTCTGGCATTCCAGCAGAATCTTGGTTTGCATCCTGAGGAGGAAAAGCAGTaGACCCATCTAATAACTATG +
Preference number: 4 (lower is better)
Translates to: PPFGKRCLAFQQNLGLHPEEEKQ*THLITM
Trigger: CATAGTTATTAGATGGGTTCACTGCTTTTCCTCCTC...AGGATGCAAACCAAGATTCTGCTGGAATGCCAGACACCGTTTACCAAAAGGCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636213.3
CDS-3UTR TCA 90 bp TGTGTTTATCAGCAAGTCACTAAGGGCAGCCCTGATTCAAGGGAGGGGAATCAGGCATCAGCTAACTGCTaGTTGAAGGATTTTCTCATC +
Preference number: 4 (lower is better)
Translates to: CVYQQVTKGSPDSREGNQASANC*LKDFLI
Trigger: GATGAGAAAATCCTTCAATCAGCAGTTAGCTGATGC...CTGATTCCCCTCCCTTGAATCAGGGCTGCCCTTAGTGACTTGCTGATAAACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR TCA 90 bp AACACAGTTTGGCACAGAGTCACAGAGATCGTTAGCAGAGCAATCTGTCCTGGGCAGACAGGCCACTGCTaGAATGATTACATGGTTTAT +
Preference number: 4 (lower is better)
Translates to: NTVWHRVTEIVSRAICPGQTGHC*NDYMVY
Trigger: ATAAACCATGTAATCATTTCAGCAGTGGCCTGTCTG...CCCAGGACAGATTGCTCTGCTAACGATCTCTGTGACTCTGTGCCAAACTGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR TCA 90 bp CACAAGGCGCGCATTGAGGTCTATTCGAGCGCAGTGCTGGTTAATATACATAATTTCTCTCCCCTTGGCTaGTCTTGCAACCTTTACACT +
Preference number: 4 (lower is better)
Translates to: HKARIEVYSSAVLVNIHNFSPLG*SCNLYT
Trigger: AGTGTAAAGGTTGCAAGATCAGCCAAGGGGAGAGAA...ATTATGTATATTAACCAGCACTGCGCTCGAATAGACCTCAATGCGCGCCTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR TCA 90 bp TGGCATTCCAGCAGAATCTTGGTTTGCATCCTTACCAGGAAGCAAAACTCCAAACAACTTCCCTTTTGGTaGAAGTTGAAGGGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: WHSSRILVCILTRKQNSKQLPFW*KLKGCL
Trigger: CAGGCAGCCCTTCAACTTTCACCAAAAGGGAAGTTG...TTTGGAGTTTTGCTTCCTGGTAAGGATGCAAACCAAGATTCTGCTGGAATGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR TCA 90 bp GATGAAGCTCGAATAACGCTCCACAGCGCTATACCATCCCATGTACTTGCGTTGAGAATGAATCTTGCTTaGGGAAATGTACGATCTCCC +
Preference number: 4 (lower is better)
Translates to: DEARITLHSAIPSHVLALRMNLA*GNVRSP
Trigger: GGGAGATCGTACATTTCCTCAAGCAAGATTCATTCT...CAACGCAAGTACATGGGATGGTATAGCGCTGTGGAGCGTTATTCGAGCTTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR TCA 90 bp GATGAAGCTCGAATAACGCTCCACAGCGCTATACCATCCCATGTACTTGCGTTGATAGTGCATAGTAGATaGAGCTCGAATAACGCTCCA +
Preference number: 4 (lower is better)
Translates to: DEARITLHSAIPSHVLALIVHSR*SSNNAP
Trigger: TGGAGCGTTATTCGAGCTTCATCTACTATGCACTAT...CAACGCAAGTACATGGGATGGTATAGCGCTGTGGAGCGTTATTCGAGCTTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR TCA 90 bp CACAAGGCGCGCATTGAGGTCTATTCGAGCGCAGTGCTGGTTAATATACATAATGAAAGATTCCAGACCTaGCTCCGATTAACCCTCTCT +
Preference number: 4 (lower is better)
Translates to: HKARIEVYSSAVLVNIHNERFQT*LRLTLS
Trigger: AGAGAGGGTTAATCGGAGTCAGGTCTGGAATCTTTC...ATTATGTATATTAACCAGCACTGCGCTCGAATAGACCTCAATGCGCGCCTTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR TCA 90 bp ACACAGTTTGGCACAGAGTCACAGAGATCGTTAGCAGAGCAATCTGTCCTGGGAAAAGAGGTGCTTTATTaGGCAACAGTACAGCTTGCA +
Preference number: 4 (lower is better)
Translates to: TQFGTESQRSLAEQSVLGKEVLY*ATVQLA
Trigger: TGCAAGCTGTACTGTTGCTCAATAAAGCACCTCTTT...TCCCAGGACAGATTGCTCTGCTAACGATCTCTGTGACTCTGTGCCAAACTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673651.1
CDS-3UTR GCA 90 bp ACGGTGTCTGGCATTCCAGCAGAATCTTGGTTTGCATCCTTACCAGGAAGCAAATCTAGGATCCTGTCATaGAGAATGGTGAAGAGACTC +
Preference number: 4 (lower is better)
Translates to: TVSGIPAESWFASLPGSKSRILS*RMVKRL
Trigger: GAGTCTCTTCACCATTCTGCATGACAGGATCCTAGA...TTTGCTTCCTGGTAAGGATGCAAACCAAGATTCTGCTGGAATGCCAGACACCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR GCA 90 bp CCCTCCTTCCCTCTTTCTCTTTCTTCCTTCCGTCTTCTTCCATTAAATATTAATGAGCCTGTCGCTTCCTaGTGCTGTTCATGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: PSFPLSLSSFRLLPLNINEPVAS*CCSWCP
Trigger: TGGGCACCATGAACAGCAGCAGGAAGCGACAGGCTC...ATTAATATTTAATGGAAGAAGACGGAAGGAAGAAAGAGAAAGAGGGAAGGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp AACACAGTTTGGCACAGAGTCACAGAGATCGTTAGCAGAGCAATCTGTCCTGGGTGTAGATCTTCCATATaGCATGGGCTTTTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: NTVWHRVTEIVSRAICPGCRSSI*HGLLSA
Trigger: TGCTGACAAAAGCCCATGCCATATGGAAGATCTACA...CCCAGGACAGATTGCTCTGCTAACGATCTCTGTGACTCTGTGCCAAACTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp GGTGAAACTCTGCTGGAAACCAACTCACCAGCAATTGCCATTAATCTACTTACTTGGAGACTTGGGCCATaGGGACAAAGAGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: GETLLETNSPAIAINLLTWRLGP*GQRGFS
Trigger: AGAGAAGCCTCTTTGTCCCCATGGCCCAAGTCTCCA...AGTAAGTAGATTAATGGCAATTGCTGGTGAGTTGGTTTCCAGCAGAGTTTCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp CTTACTAAAGAATTTCTGACAGCCTTTAAGATGCGGCTAGGTGCCCTGTGCCGGTCTTCAACCACAGCTTaGTCTTCCTTTAAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: LTKEFLTAFKMRLGALCRSSTTA*SSFKAF
Trigger: GAAGGCTTTAAAGGAAGACCAAGCTGTGGTTGAAGA...CCGGCACAGGGCACCTAGCCGCATCTTAAAGGCTGTCAGAAATTCTTTAGTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp ACGCATGGAAGAAAAGCAAACCCGCCTTTTGGTAAACGGTGTCTGGCATTCCAGATTCCAGCAGAATCTTaGTTTGCATCCTTACCAGGA +
Preference number: 4 (lower is better)
Translates to: THGRKANPPFGKRCLAFQIPAES*FASLPG
Trigger: TCCTGGTAAGGATGCAAACCAAGATTCTGCTGGAAT...CTGGAATGCCAGACACCGTTTACCAAAAGGCGGGTTTGCTTTTCTTCCATGCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp CCAGAGCCTACGATTCAGATACAGGCTCTTAACAAGGCCTTACTTGTAGTTAGGGTTGGACATTACGCATaGAAGAAAAGCAAACCCGCC +
Preference number: 4 (lower is better)
Translates to: PEPTIQIQALNKALLVVRVGHYA*KKSKPA
Trigger: GGCGGGTTTGCTTTTCTTCCATGCGTAATGTCCAAC...CCTAACTACAAGTAAGGCCTTGTTAAGAGCCTGTATCTGAATCGTAGGCTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp TGGCATTCCAGCAGAATCTTGGTTTGCATCCTTACCAGGAAGCAAAACTCCAAAAGGGCAACACTCCTTTaGAGACAGCGGCATATAGTG +
Preference number: 4 (lower is better)
Translates to: WHSSRILVCILTRKQNSKRATLL*RQRHIV
Trigger: CACTATATGCCGCTGTCTCCAAAGGAGTGTTGCCCT...TTTGGAGTTTTGCTTCCTGGTAAGGATGCAAACCAAGATTCTGCTGGAATGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp GTGTCTGGCATTCCAGCAGAATCTTGGTTTGCATCCTTACCAGGAAGCAAAACTTCTTGTAGGGTTGATTaGTTGGTGGAAATGGCTGGC +
Preference number: 4 (lower is better)
Translates to: VSGIPAESWFASLPGSKTSCRVD*LVEMAG
Trigger: GCCAGCCATTTCCACCAACCAATCAACCCTACAAGA...AGTTTTGCTTCCTGGTAAGGATGCAAACCAAGATTCTGCTGGAATGCCAGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp GAAGTATCTGATACCTGCTATTGCTATTCAATAGACTTTTATTCCTCCTGGGTCAATCCTCTCCAGCTCTaGACCATGGTTGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: EVSDTCYCYSIDFYSSWVNPLQL*TMVGPG
Trigger: CCCAGGCCCAACCATGGTCCAGAGCTGGAGAGGATT...GACCCAGGAGGAATAAAAGTCTATTGAATAGCAATAGCAGGTATCAGATACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649478.1
3UTR CAA 72 bp TGGACATTACGCATGGAAGAAAAGCAAACCCGCCTTTaGGTAAACGGTGTCTGGCATTCCAGCAGAATCTTG +
Preference number: 4 (lower is better)
Translates to: WTLRMEEKQTRL*VNGVWHSSRIL
Trigger: CAAGATTCTGCTGGAATGCCAGACACCGTTTACCAAAAGGCGGGTTTGCTTTTCTTCCATGCGTAATGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR TCA 90 bp GCAAACCCGCCTTTTGGTAAACGGTGTCTGGCATTCCAGCAGAATCTTGGTTTGTGGCATGGTCTGTGCTaGAAAAGCCAATCTTTAAAT +
Preference number: 4 (lower is better)
Translates to: ANPPFGKRCLAFQQNLGLWHGLC*KSQSLN
Trigger: ATTTAAAGATTGGCTTTTTCAGCACAGACCATGCCA...CAAACCAAGATTCTGCTGGAATGCCAGACACCGTTTACCAAAAGGCGGGTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR TCA 90 bp GAGCTCCCATACAAAGGGAGAGGACCCAAAGAGGGTAGCCCTCTATGTGTATTATGGCATGGTCTGTGCTaGAAAAGCCAATCTTTAAAT +
Preference number: 4 (lower is better)
Translates to: ELPYKGRGPKEGSPLCVLWHGLC*KSQSLN
Trigger: ATTTAAAGATTGGCTTTTTCAGCACAGACCATGCCA...TAATACACATAGAGGGCTACCCTCTTTGGGTCCTCTCCCTTTGTATGGGAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649478.1
CDS-3UTR TCA 90 bp GGCTCCATGACATTACCAAGGACCCCTCTGCTTCTTATCTTTCCACCTTGCTACTGGCATGGTCTGTGCTaGAAAAGCCAATCTTTAAAT +
Preference number: 4 (lower is better)
Translates to: GSMTLPRTPLLLIFPPCYWHGLC*KSQSLN
Trigger: ATTTAAAGATTGGCTTTTTCAGCACAGACCATGCCA...GTAGCAAGGTGGAAAGATAAGAAGCAGAGGGGTCCTTGGTAATGTCATGGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR TCA 90 bp CACAGAGTCACAGAGATCGTTAGCAGAGCAATCTGTCCTGGGATGTTTTCAGCTGCATCAGCTAACTGCTaGTTGAAGGATTTTCTCATC +
Preference number: 4 (lower is better)
Translates to: HRVTEIVSRAICPGMFSAASANC*LKDFLI
Trigger: GATGAGAAAATCCTTCAATCAGCAGTTAGCTGATGC...AGCTGAAAACATCCCAGGACAGATTGCTCTGCTAACGATCTCTGTGACTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR TCA 90 bp CAGATACAGGCTCTTAACAAGGCCTTACTTGTAGTTAGGGGAATAGAAAGAACCCAACTTCCCTTTTGGTaGAAGTTGAAGGGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: QIQALNKALLVVRGIERTQLPFW*KLKGCL
Trigger: CAGGCAGCCCTTCAACTTTCACCAAAAGGGAAGTTG...GGTTCTTTCTATTCCCCTAACTACAAGTAAGGCCTTGTTAAGAGCCTGTATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR TCA 90 bp GCAAACCCGCCTTTTGGTAAACGGTGTCTGGCATTCCAGCAGAATCTTGGTTTGTTACTAAAGAATTTCTaGCAGCCTTTAAGATGCGGC +
Preference number: 4 (lower is better)
Translates to: ANPPFGKRCLAFQQNLGLLLKNF*QPLRCG
Trigger: GCCGCATCTTAAAGGCTGTCAGAAATTCTTTAGTAA...CAAACCAAGATTCTGCTGGAATGCCAGACACCGTTTACCAAAAGGCGGGTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR TCA 90 bp AACGCTCCACAGCGCTATACCATCCCATGTACTTGCGTTGAAAAGAACACGTCTATAGTGCATAGTAGATaGAGCTCGAATAACGCTCCA +
Preference number: 4 (lower is better)
Translates to: NAPQRYTIPCTCVEKNTSIVHSR*SSNNAP
Trigger: TGGAGCGTTATTCGAGCTTCATCTACTATGCACTAT...AGACGTGTTCTTTTCAACGCAAGTACATGGGATGGTATAGCGCTGTGGAGCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR GCA 90 bp ACCAGGAGGCTGCTTCCAAGGAATTTCTGTCCAGGACGATGGCACAGAGAATACATGGTCGTTCTAGACTaGACTAATAAGGGTTTTACT +
Preference number: 4 (lower is better)
Translates to: TRRLLPRNFCPGRWHREYMVVLD*TNKGFT
Trigger: AGTAAAACCCTTATTAGTGCAGTCTAGAACGACCAT...GTATTCTCTGTGCCATCGTCCTGGACAGAAATTCCTTGGAAGCAGCCTCCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR GCA 90 bp ACAGCCTTTAAGATGCGGCTAGGTGCCCTGTGCCGGGGTAAGATAAGAATGAATCTGACTACATCCACATaGTTACCGTCTATTGAAGAT +
Preference number: 4 (lower is better)
Translates to: TAFKMRLGALCRGKIRMNLTTST*LPSIED
Trigger: ATCTTCAATAGACGGTAAGCATGTGGATGTAGTCAG...ATTCATTCTTATCTTACCCCGGCACAGGGCACCTAGCCGCATCTTAAAGGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR GCA 90 bp AACGCTCCACAGCGCTATACCATCCCATGTACTTGCGTTGAAAAGAACACGTCTACCATCCCATGTACTTaGGTTGAAAAGAACACGTCT +
Preference number: 4 (lower is better)
Translates to: NAPQRYTIPCTCVEKNTSTIPCT*VEKNTS
Trigger: AGACGTGTTCTTTTCAACGCAAGTACATGGGATGGT...AGACGTGTTCTTTTCAACGCAAGTACATGGGATGGTATAGCGCTGTGGAGCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR GCA 90 bp GAAATGAAGCAGTTTGATATCACACCCAACCAGGAGGCTGCTTCCAAGGAATTTTCTCTGGTGAAACTCTaGTGGAAACCAACTCACCAG +
Preference number: 4 (lower is better)
Translates to: EMKQFDITPNQEAASKEFSLVKL*WKPTHQ
Trigger: CTGGTGAGTTGGTTTCCAGCAGAGTTTCACCAGAGA...AAATTCCTTGGAAGCAGCCTCCTGGTTGGGTGTGATATCAAACTGCTTCATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR GCA 90 bp CAGATACAGGCTCTTAACAAGGCCTTACTTGTAGTTAGGGGAATAGAAAGAACCACCCAACCAGGAGGCTaGTTCCAAGGAATTTCTGTC +
Preference number: 4 (lower is better)
Translates to: QIQALNKALLVVRGIERTTQPGG*FQGISV
Trigger: GACAGAAATTCCTTGGAAGCAGCCTCCTGGTTGGGT...GGTTCTTTCTATTCCCCTAACTACAAGTAAGGCCTTGTTAAGAGCCTGTATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp TGTGTTTATCAGCAAGTCACTAAGGGCAGCCCTGATTCAAGGGAGGGGAATCAGCTGACAGTATTTCACTaGAATCAGTTTGAGTGGCAT +
Preference number: 4 (lower is better)
Translates to: CVYQQVTKGSPDSREGNQLTVFH*NQFEWH
Trigger: ATGCCACTCAAACTGATTCCAGTGAAATACTGTCAG...CTGATTCCCCTCCCTTGAATCAGGGCTGCCCTTAGTGACTTGCTGATAAACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp GAGCTCCCATACAAAGGGAGAGGACCCAAAGAGGGTAGCCCTCTATGTGTATTAAACCCAAAATCTACCTaGAGGGATTTCATCATCTGT +
Preference number: 4 (lower is better)
Translates to: ELPYKGRGPKEGSPLCVLNPKST*RDFIIC
Trigger: ACAGATGATGAAATCCCTCCAGGTAGATTTTGGGTT...TAATACACATAGAGGGCTACCCTCTTTGGGTCCTCTCCCTTTGTATGGGAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649478.1
CDS-3UTR CCA 90 bp AACACAGTTTGGCACAGAGTCACAGAGATCGTTAGCAGAGCAATCTGTCCTGGGTGGTTTCACAGTGGCTaGTACATTCCTTTGATAACA +
Preference number: 4 (lower is better)
Translates to: NTVWHRVTEIVSRAICPGWFHSG*YIPLIT
Trigger: TGTTATCAAAGGAATGTACCAGCCACTGTGAAACCA...CCCAGGACAGATTGCTCTGCTAACGATCTCTGTGACTCTGTGCCAAACTGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp CCCTCCTTCCCTCTTTCTCTTTCTTCCTTCCGTCTTCTTCCATTAAATATTAATCCCTACATTCCAGCCTaGGAGACAGTGAGATCCCTG +
Preference number: 4 (lower is better)
Translates to: PSFPLSLSSFRLLPLNINPYIPA*ETVRSL
Trigger: CAGGGATCTCACTGTCTCCCAGGCTGGAATGTAGGG...ATTAATATTTAATGGAAGAAGACGGAAGGAAGAAAGAGAAAGAGGGAAGGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp TGGCATTCCAGCAGAATCTTGGTTTGCATCCTTACCAGGAAGCAAAACTCCAAAAGGCTTCTCTCCCCTTaGCTGATCTTGCAACCTTTA +
Preference number: 4 (lower is better)
Translates to: WHSSRILVCILTRKQNSKRLLSP*LILQPL
Trigger: TAAAGGTTGCAAGATCAGCCAAGGGGAGAGAAGCCT...TTTGGAGTTTTGCTTCCTGGTAAGGATGCAAACCAAGATTCTGCTGGAATGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp GAAATGAAGCAGTTTGATATCACACCCAACCAGGAGGCTGCTTCCAAGGAATTTCAGATGATACACTCATaGTCGCAGAATGTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: EMKQFDITPNQEAASKEFQMIHS*SQNVAS
Trigger: TGAGGCCACATTCTGCGACCATGAGTGTATCATCTG...AAATTCCTTGGAAGCAGCCTCCTGGTTGGGTGTGATATCAAACTGCTTCATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp TCCCATGTACTTGCGTTGAAAAGAACACGTCTCTCTCCAATTAAATCTTGTTCCCTTTCCTTAAAGGCGTaGAAAGGAGCGCGCACAAGG +
Preference number: 4 (lower is better)
Translates to: SHVLALKRTRLSPIKSCSLSLKA*KGARTR
Trigger: CCTTGTGCGCGCTCCTTTCCACGCCTTTAAGGAAAG...GGAACAAGATTTAATTGGAGAGAGACGTGTTCTTTTCAACGCAAGTACATGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp AATAGAAAGAACCAAGTTGGACATTACGCATGGAAGAAAAGCAAACCCGCCTTTGTAGGGTTGATTGGTTaGTGGAAATGGCTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: NRKNQVGHYAWKKSKPAFVGLIG*WKWLAA
Trigger: GGCTGCCAGCCATTTCCACCAACCAATCAACCCTAC...AAAGGCGGGTTTGCTTTTCTTCCATGCGTAATGTCCAACTTGGTTCTTTCTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR TCA 90 bp ACGGTGTCTGGCATTCCAGCAGAATCTTGGTTTGCATCCTTACCAGGAAGCAAATGGCATGGTCTGTGCTaGAAAAGCCAATCTTTAAAT +
Preference number: 4 (lower is better)
Translates to: TVSGIPAESWFASLPGSKWHGLC*KSQSLN
Trigger: ATTTAAAGATTGGCTTTTTCAGCACAGACCATGCCA...TTTGCTTCCTGGTAAGGATGCAAACCAAGATTCTGCTGGAATGCCAGACACCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR TCA 90 bp ACCAAGTTGGACATTACGCATGGAAGAAAAGCAAACCCGCCTTTTGGTAAACGGGCATCAGCTAACTGCTaGTTGAAGGATTTTCTCATC +
Preference number: 4 (lower is better)
Translates to: TKLDITHGRKANPPFGKRASANC*LKDFLI
Trigger: GATGAGAAAATCCTTCAATCAGCAGTTAGCTGATGC...CCGTTTACCAAAAGGCGGGTTTGCTTTTCTTCCATGCGTAATGTCCAACTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR GCA 90 bp GAAACAGAGCTCCCATACAAAGGGAGAGGACCCAAAGAGGGTAGCCCTCTATGTATCTGTGCTAACTTTTaGGTAGATGAACTCAATTCT +
Preference number: 4 (lower is better)
Translates to: ETELPYKGRGPKEGSPLCICANF*VDELNS
Trigger: AGAATTGAGTTCATCTACGCAAAAGTTAGCACAGAT...ACATAGAGGGCTACCCTCTTTGGGTCCTCTCCCTTTGTATGGGAGCTCTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649478.1
CDS-3UTR GCA 90 bp GGTGAAACTCTGCTGGAAACCAACTCACCAGCAATTGCCATTAATCTACTTACTTCTCTGGTGAAACTCTaGTGGAAACCAACTCACCAG +
Preference number: 4 (lower is better)
Translates to: GETLLETNSPAIAINLLTSLVKL*WKPTHQ
Trigger: CTGGTGAGTTGGTTTCCAGCAGAGTTTCACCAGAGA...AGTAAGTAGATTAATGGCAATTGCTGGTGAGTTGGTTTCCAGCAGAGTTTCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp CACAGCGCTATACCATCCCATGTACTTGCGTTGAAAAGAACACGTCTCTCTCCAAACCCAAAATCTACCTaGAGGGATTTCATCATCTGT +
Preference number: 4 (lower is better)
Translates to: HSAIPSHVLALKRTRLSPNPKST*RDFIIC
Trigger: ACAGATGATGAAATCCCTCCAGGTAGATTTTGGGTT...TGGAGAGAGACGTGTTCTTTTCAACGCAAGTACATGGGATGGTATAGCGCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp CAGATACAGGCTCTTAACAAGGCCTTACTTGTAGTTAGGGGAATAGAAAGAACCAGGCTTCTCTCCCCTTaGCTGATCTTGCAACCTTTA +
Preference number: 4 (lower is better)
Translates to: QIQALNKALLVVRGIERTRLLSP*LILQPL
Trigger: TAAAGGTTGCAAGATCAGCCAAGGGGAGAGAAGCCT...GGTTCTTTCTATTCCCCTAACTACAAGTAAGGCCTTGTTAAGAGCCTGTATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp AAAGAAGCGCCAAACTGTGTAACTGTAATTCAGCCAAGGACTGCTAAAACAAGGCAAGGACTCTTCTTTTaGGGATTCCGACAACTTCCC +
Preference number: 4 (lower is better)
Translates to: KEAPNCVTVIQPRTAKTRQGLFF*GFRQLP
Trigger: GGGAAGTTGTCGGAATCCCCAAAAGAAGAGTCCTTG...CCTTGTTTTAGCAGTCCTTGGCTGAATTACAGTTACACAGTTTGGCGCTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp AATAGAAAGAACCAAGTTGGACATTACGCATGGAAGAAAAGCAAACCCGCCTTTAGGGCAACACTCCTTTaGAGACAGCGGCATATAGTG +
Preference number: 4 (lower is better)
Translates to: NRKNQVGHYAWKKSKPAFRATLL*RQRHIV
Trigger: CACTATATGCCGCTGTCTCCAAAGGAGTGTTGCCCT...AAAGGCGGGTTTGCTTTTCTTCCATGCGTAATGTCCAACTTGGTTCTTTCTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp ACCTGCTATTGCTATTCAATAGACTTTTATTCCTCCTGGGTCCCAGCATCTGTTTCCAAGTTGGCTTCTTaGAAGCTCTGGCTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: TCYCYSIDFYSSWVPASVSKLAS*KLWLGK
Trigger: CTTTCCAAGCCAGAGCTTCCAAGAAGCCAACTTGGA...AACAGATGCTGGGACCCAGGAGGAATAAAAGTCTATTGAATAGCAATAGCAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649478.1
3UTR CAA 72 bp CTTTTGGTAAACGGTGTCTGGCATTCCAGCAGAATCTaGGTTTGCATCCTTACCAGGAAGCAAAACTCCAAA +
Preference number: 4 (lower is better)
Translates to: LLVNGVWHSSRI*VCILTRKQNSK
Trigger: TTTGGAGTTTTGCTTCCTGGTAAGGATGCAAACCAAGATTCTGCTGGAATGCCAGACACCGTTTACCAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR CAA 72 bp ACGCTCCACAGCGCTATACCATCCCATGTACTTGCGTaGAAAAGAACACGTCTCTCTCCAATTAAATCTTGT +
Preference number: 4 (lower is better)
Translates to: TLHSAIPSHVLA*KRTRLSPIKSC
Trigger: ACAAGATTTAATTGGAGAGAGACGTGTTCTTTTCAACGCAAGTACATGGGATGGTATAGCGCTGTGGAGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR TCA 90 bp ACCAAGTTGGACATTACGCATGGAAGAAAAGCAAACCCGCCTTTTGGTAAACGGGACAGCAAAACAGGTTaGTGCTTTTGGTATAGAAAG +
Preference number: 4 (lower is better)
Translates to: TKLDITHGRKANPPFGKRDSKTG*CFWYRK
Trigger: CTTTCTATACCAAAAGCATCAACCTGTTTTGCTGTC...CCGTTTACCAAAAGGCGGGTTTGCTTTTCTTCCATGCGTAATGTCCAACTTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR TCA 90 bp TTGGTTTGCATCCTTACCAGGAAGCAAAACTCCAAAGAGTTTCCCTACTTACTAGAAAGATTCCAGACCTaGCTCCGATTAACCCTCTCT +
Preference number: 4 (lower is better)
Translates to: LVCILTRKQNSKEFPYLLERFQT*LRLTLS
Trigger: AGAGAGGGTTAATCGGAGTCAGGTCTGGAATCTTTC...TAGTAAGTAGGGAAACTCTTTGGAGTTTTGCTTCCTGGTAAGGATGCAAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR TCA 90 bp ACCAAGTTGGACATTACGCATGGAAGAAAAGCAAACCCGCCTTTTGGTAAACGGCTTTATTGTGCCATTTaGAACTTTGCTTTGGTACCC +
Preference number: 4 (lower is better)
Translates to: TKLDITHGRKANPPFGKRLYCAI*NFALVP
Trigger: GGGTACCAAAGCAAAGTTTCAAATGGCACAATAAAG...CCGTTTACCAAAAGGCGGGTTTGCTTTTCTTCCATGCGTAATGTCCAACTTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR GCA 90 bp AACACAGTTTGGCACAGAGTCACAGAGATCGTTAGCAGAGCAATCTGTCCTGGGATCTGTGCTAACTTTTaGGTAGATGAACTCAATTCT +
Preference number: 4 (lower is better)
Translates to: NTVWHRVTEIVSRAICPGICANF*VDELNS
Trigger: AGAATTGAGTTCATCTACGCAAAAGTTAGCACAGAT...CCCAGGACAGATTGCTCTGCTAACGATCTCTGTGACTCTGTGCCAAACTGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR GCA 90 bp ACAGCCTTTAAGATGCGGCTAGGTGCCCTGTGCCGGGGTAAGATAAGAATGAATTGCCATTTGAAACTTTaGTTTGGTACCCAGATAAAT +
Preference number: 4 (lower is better)
Translates to: TAFKMRLGALCRGKIRMNCHLKL*FGTQIN
Trigger: ATTTATCTGGGTACCAAAGCAAAGTTTCAAATGGCA...ATTCATTCTTATCTTACCCCGGCACAGGGCACCTAGCCGCATCTTAAAGGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp CCCTCCTTCCCTCTTTCTCTTTCTTCCTTCCGTCTTCTTCCATTAAATATTAATGAAGCTCATGCTGATTaGTCAATGGGCAGCCATAGG +
Preference number: 4 (lower is better)
Translates to: PSFPLSLSSFRLLPLNINEAHAD*SMGSHR
Trigger: CCTATGGCTGCCCATTGACCAATCAGCATGAGCTTC...ATTAATATTTAATGGAAGAAGACGGAAGGAAGAAAGAGAAAGAGGGAAGGAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CCA 90 bp GCAAACCCGCCTTTTGGTAAACGGTGTCTGGCATTCCAGCAGAATCTTGGTTTGACCTCAAAGAATTGCTaGTACATTCCTTTGATAACA +
Preference number: 4 (lower is better)
Translates to: ANPPFGKRCLAFQQNLGLTSKNC*YIPLIT
Trigger: TGTTATCAAAGGAATGTACCAGCAATTCTTTGAGGT...CAAACCAAGATTCTGCTGGAATGCCAGACACCGTTTACCAAAAGGCGGGTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp GAGCTCCCATACAAAGGGAGAGGACCCAAAGAGGGTAGCCCTCTATGTGTATTAACCTCAAAGAATTGCTaGTACATTCCTTTGATAACA +
Preference number: 4 (lower is better)
Translates to: ELPYKGRGPKEGSPLCVLTSKNC*YIPLIT
Trigger: TGTTATCAAAGGAATGTACCAGCAATTCTTTGAGGT...TAATACACATAGAGGGCTACCCTCTTTGGGTCCTCTCCCTTTGTATGGGAGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649478.1
CDS-3UTR CCA 90 bp CGGTGTCTGGCATTCCAGCAGAATCTTGGTTTGCATCCTTACCAGGAAGCAAAAGAGAGCTGGTTTCTTTaGCAAAAGATTCCATTTTGT +
Preference number: 4 (lower is better)
Translates to: RCLAFQQNLGLHPYQEAKESWFL*QKIPFC
Trigger: ACAAAATGGAATCTTTTGCCAAAGAAACCAGCTCTC...TTTTGCTTCCTGGTAAGGATGCAAACCAAGATTCTGCTGGAATGCCAGACACCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp TCCCATGTACTTGCGTTGAAAAGAACACGTCTCTCTCCAATTAAATCTTGTTCCCAGATGATACACTCATaGTCGCAGAATGTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: SHVLALKRTRLSPIKSCSQMIHS*SQNVAS
Trigger: TGAGGCCACATTCTGCGACCATGAGTGTATCATCTG...GGAACAAGATTTAATTGGAGAGAGACGTGTTCTTTTCAACGCAAGTACATGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp ACCAAGTTGGACATTACGCATGGAAGAAAAGCAAACCCGCCTTTTGGTAAACGGATTCGAGCGCAGTGCTaGTTAATATACATAATCTGG +
Preference number: 4 (lower is better)
Translates to: TKLDITHGRKANPPFGKRIRAQC*LIYIIW
Trigger: CCAGATTATGTATATTAACCAGCACTGCGCTCGAAT...CCGTTTACCAAAAGGCGGGTTTGCTTTTCTTCCATGCGTAATGTCCAACTTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp TATTCAATAGACTTTTATTCCTCCTGGGTCCCAGCATCTGTTAGCCTTTCCAAAGACTTTTATTCCTCCTaGGTCCCAGCATCTGTTAGC +
Preference number: 4 (lower is better)
Translates to: YSIDFYSSWVPASVSLSKDFYSS*VPASVS
Trigger: GCTAACAGATGCTGGGACCCAGGAGGAATAAAAGTC...TTTGGAAAGGCTAACAGATGCTGGGACCCAGGAGGAATAAAAGTCTATTGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649478.1
CDS-3UTR TCA 90 bp AATAGAAAGAACCAAGTTGGACATTACGCATGGAAGAAAAGCAAACCCGCCTTTAGCTCTGAAATGATCTaGAGCAGCCTCTCATTTTCC +
Preference number: 4 (lower is better)
Translates to: NRKNQVGHYAWKKSKPAFSSEMI*SSLSFS
Trigger: GGAAAATGAGAGGCTGCTTCAGATCATTTCAGAGCT...AAAGGCGGGTTTGCTTTTCTTCCATGCGTAATGTCCAACTTGGTTCTTTCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR TCA 90 bp ACTGTAGAATTCTGTAATCCAGAGCCTACGATTCAGATACAGGCTCTTAACAAGCTTCAAGCTCTGAAATaGTCTGAAGCAGCCTCTCAT +
Preference number: 4 (lower is better)
Translates to: TVEFCNPEPTIQIQALNKLQALK*SEAASH
Trigger: ATGAGAGGCTGCTTCAGATCATTTCAGAGCTTGAAG...CTTGTTAAGAGCCTGTATCTGAATCGTAGGCTCTGGATTACAGAATTCTACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR GCA 90 bp AACGCTCCACAGCGCTATACCATCCCATGTACTTGCGTTGAAAAGAACACGTCTTCTACCTCAAAGAATTaGTGGTACATTCCTTTGATA +
Preference number: 4 (lower is better)
Translates to: NAPQRYTIPCTCVEKNTSSTSKN*WYIPLI
Trigger: TATCAAAGGAATGTACCAGCAATTCTTTGAGGTAGA...AGACGTGTTCTTTTCAACGCAAGTACATGGGATGGTATAGCGCTGTGGAGCGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp CCCTCCTTCCCTCTTTCTCTTTCTTCCTTCCGTCTTCTTCCATTAAATATTAATCATATTTTTGACTCCTaGGCTGGGGTGACTCAAAGG +
Preference number: 4 (lower is better)
Translates to: PSFPLSLSSFRLLPLNINHIFDS*AGVTQR
Trigger: CCTTTGAGTCACCCCAGCCCAGGAGTCAAAAATATG...ATTAATATTTAATGGAAGAAGACGGAAGGAAGAAAGAGAAAGAGGGAAGGAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR TCA 90 bp AAAGAAGCGCCAAACTGTGTAACTGTAATTCAGCCAAGGACTGCTAAAACAAGGTTACTAAAGAATTTCTaGCAGCCTTTAAGATGCGGC +
Preference number: 4 (lower is better)
Translates to: KEAPNCVTVIQPRTAKTRLLKNF*QPLRCG
Trigger: GCCGCATCTTAAAGGCTGTCAGAAATTCTTTAGTAA...CCTTGTTTTAGCAGTCCTTGGCTGAATTACAGTTACACAGTTTGGCGCTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR GCA 90 bp CCCTCCTTCCCTCTTTCTCTTTCTTCCTTCCGTCTTCTTCCATTAAATATTAATTCTAGGATCCTGTCATaGAGAATGGTGAAGAGACTC +
Preference number: 4 (lower is better)
Translates to: PSFPLSLSSFRLLPLNINSRILS*RMVKRL
Trigger: GAGTCTCTTCACCATTCTGCATGACAGGATCCTAGA...ATTAATATTTAATGGAAGAAGACGGAAGGAAGAAAGAGAAAGAGGGAAGGAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR GCA 90 bp CCCTCCTTCCCTCTTTCTCTTTCTTCCTTCCGTCTTCTTCCATTAAATATTAATGCTTGGCCACAACTTTaGTTCAAAATCAGAGTGGGT +
Preference number: 4 (lower is better)
Translates to: PSFPLSLSSFRLLPLNINAWPQL*FKIRVG
Trigger: ACCCACTCTGATTTTGAAGCAAAGTTGTGGCCAAGC...ATTAATATTTAATGGAAGAAGACGGAAGGAAGAAAGAGAAAGAGGGAAGGAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR GCA 90 bp ACCAAGTTGGACATTACGCATGGAAGAAAAGCAAACCCGCCTTTTGGTAAACGGTCTACCTCAAAGAATTaGTGGTACATTCCTTTGATA +
Preference number: 4 (lower is better)
Translates to: TKLDITHGRKANPPFGKRSTSKN*WYIPLI
Trigger: TATCAAAGGAATGTACCAGCAATTCTTTGAGGTAGA...CCGTTTACCAAAAGGCGGGTTTGCTTTTCTTCCATGCGTAATGTCCAACTTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR GCA 90 bp CAGATACAGGCTCTTAACAAGGCCTTACTTGTAGTTAGGGGAATAGAAAGAACCCTGACTACATCCACATaGTTACCGTCTATTGAAGAT +
Preference number: 4 (lower is better)
Translates to: QIQALNKALLVVRGIERTLTTST*LPSIED
Trigger: ATCTTCAATAGACGGTAAGCATGTGGATGTAGTCAG...GGTTCTTTCTATTCCCCTAACTACAAGTAAGGCCTTGTTAAGAGCCTGTATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR GCA 90 bp GAAATGAAGCAGTTTGATATCACACCCAACCAGGAGGCTGCTTCCAAGGAATTTTCTATTCGAGCGCAGTaGTGGTTAATATACATAATC +
Preference number: 4 (lower is better)
Translates to: EMKQFDITPNQEAASKEFSIRAQ*WLIYII
Trigger: GATTATGTATATTAACCAGCACTGCGCTCGAATAGA...AAATTCCTTGGAAGCAGCCTCCTGGTTGGGTGTGATATCAAACTGCTTCATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR GCA 90 bp CCAGAGCCTACGATTCAGATACAGGCTCTTAACAAGGCCTTACTTGTAGTTAGGGATAAGAATGAATCTTaGTTGAGGAAATGTACGATC +
Preference number: 4 (lower is better)
Translates to: PEPTIQIQALNKALLVVRDKNES*LRKCTI
Trigger: GATCGTACATTTCCTCAAGCAAGATTCATTCTTATC...CCTAACTACAAGTAAGGCCTTGTTAAGAGCCTGTATCTGAATCGTAGGCTCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR GCA 90 bp TTGGTTTGCATCCTTACCAGGAAGCAAAACTCCAAAGAGTTTCCCTACTTACTAACCATCCCATGTACTTaGGTTGAAAAGAACACGTCT +
Preference number: 4 (lower is better)
Translates to: LVCILTRKQNSKEFPYLLTIPCT*VEKNTS
Trigger: AGACGTGTTCTTTTCAACGCAAGTACATGGGATGGT...TAGTAAGTAGGGAAACTCTTTGGAGTTTTGCTTCCTGGTAAGGATGCAAACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR GCA 90 bp CACAAGGCGCGCATTGAGGTCTATTCGAGCGCAGTGCTGGTTAATATACATAATTGGAGACCTTTATTGTaGCATTTGAAACTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: HKARIEVYSSAVLVNIHNWRPLL*HLKLCF
Trigger: AAAGCAAAGTTTCAAATGGCACAATAAAGGTCTCCA...ATTATGTATATTAACCAGCACTGCGCTCGAATAGACCTCAATGCGCGCCTTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp AAAGAAGCGCCAAACTGTGTAACTGTAATTCAGCCAAGGACTGCTAAAACAAGGAACCCAAAATCTACCTaGAGGGATTTCATCATCTGT +
Preference number: 4 (lower is better)
Translates to: KEAPNCVTVIQPRTAKTRNPKST*RDFIIC
Trigger: ACAGATGATGAAATCCCTCCAGGTAGATTTTGGGTT...CCTTGTTTTAGCAGTCCTTGGCTGAATTACAGTTACACAGTTTGGCGCTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CCA 90 bp AAAGAAGCGCCAAACTGTGTAACTGTAATTCAGCCAAGGACTGCTAAAACAAGGATTCGAGCGCAGTGCTaGTTAATATACATAATCTGG +
Preference number: 4 (lower is better)
Translates to: KEAPNCVTVIQPRTAKTRIRAQC*LIYIIW
Trigger: CCAGATTATGTATATTAACCAGCACTGCGCTCGAAT...CCTTGTTTTAGCAGTCCTTGGCTGAATTACAGTTACACAGTTTGGCGCTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR TCA 90 bp CCCTCCTTCCCTCTTTCTCTTTCTTCCTTCCGTCTTCTTCCATTAAATATTAATTGTCATGCAGAATGGTaGAGAGACTCAAAGATTCCT +
Preference number: 4 (lower is better)
Translates to: PSFPLSLSSFRLLPLNINCHAEW*RDSKIP
Trigger: AGGAATCTTTGAGTCTCTTCACCATTCTGCATGACA...ATTAATATTTAATGGAAGAAGACGGAAGGAAGAAAGAGAAAGAGGGAAGGAGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR TCA 90 bp ATAACTGTAGAATTCTGTAATCCAGAGCCTACGATTCAGATACAGGCTCTTAACTGTCATGCAGAATGGTaGAGAGACTCAAAGATTCCT +
Preference number: 4 (lower is better)
Translates to: ITVEFCNPEPTIQIQALNCHAEW*RDSKIP
Trigger: AGGAATCTTTGAGTCTCTTCACCATTCTGCATGACA...GTTAAGAGCCTGTATCTGAATCGTAGGCTCTGGATTACAGAATTCTACAGTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR TCA 90 bp TTGGTTTGCATCCTTACCAGGAAGCAAAACTCCAAAGAGTTTCCCTACTTACTAGACAGCAAAACAGGTTaGTGCTTTTGGTATAGAAAG +
Preference number: 4 (lower is better)
Translates to: LVCILTRKQNSKEFPYLLDSKTG*CFWYRK
Trigger: CTTTCTATACCAAAAGCATCAACCTGTTTTGCTGTC...TAGTAAGTAGGGAAACTCTTTGGAGTTTTGCTTCCTGGTAAGGATGCAAACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR TCA 90 bp TTGGTTTGCATCCTTACCAGGAAGCAAAACTCCAAAGAGTTTCCCTACTTACTACTTTATTGTGCCATTTaGAACTTTGCTTTGGTACCC +
Preference number: 4 (lower is better)
Translates to: LVCILTRKQNSKEFPYLLLYCAI*NFALVP
Trigger: GGGTACCAAAGCAAAGTTTCAAATGGCACAATAAAG...TAGTAAGTAGGGAAACTCTTTGGAGTTTTGCTTCCTGGTAAGGATGCAAACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR TCA 90 bp GAAGTATCTGATACCTGCTATTGCTATTCAATAGACTTTTATTCCTCCTGGGTCCTTAAACTTCCTCCTTaGCAGGAGTTTAGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: EVSDTCYCYSIDFYSSWVLKLPP*QEFRFF
Trigger: GAAGAACCTAAACTCCTGTCAAGGAGGAAGTTTAAG...GACCCAGGAGGAATAAAAGTCTATTGAATAGCAATAGCAGGTATCAGATACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649478.1
CDS-3UTR GCA 90 bp CGCATTGAGGTCTATTCGAGCGCAGTGCTGGTTAATATACATAATCTGGAGAGATGCCATTTGAAACTTTaGTTTGGTACCCAGATAAAT +
Preference number: 4 (lower is better)
Translates to: RIEVYSSAVLVNIHNLERCHLKL*FGTQIN
Trigger: ATTTATCTGGGTACCAAAGCAAAGTTTCAAATGGCA...TCTCTCCAGATTATGTATATTAACCAGCACTGCGCTCGAATAGACCTCAATGCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR GCA 90 bp ACCTGCTATTGCTATTCAATAGACTTTTATTCCTCCTGGGTCCCAGCATCTGTTTTAGGTTCTTCTTTCTaGCTTCTCAGTCATTCCATT +
Preference number: 4 (lower is better)
Translates to: TCYCYSIDFYSSWVPASVLGSSF*LLSHSI
Trigger: AATGGAATGACTGAGAAGGCAGAAAGAAGAACCTAA...AACAGATGCTGGGACCCAGGAGGAATAAAAGTCTATTGAATAGCAATAGCAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649478.1
CDS-3UTR CCA 90 bp CCCTCCTTCCCTCTTTCTCTTTCTTCCTTCCGTCTTCTTCCATTAAATATTAATGAGTATCTCAATGTTTaGTTTCACAGTGGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: PSFPLSLSSFRLLPLNINEYLNV*FHSGWY
Trigger: GTACCAGCCACTGTGAAACCAAACATTGAGATACTC...ATTAATATTTAATGGAAGAAGACGGAAGGAAGAAAGAGAAAGAGGGAAGGAGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR TCA 90 bp TCCAAGGAATTTCTGTCCAGGACGATGGCACAGAGAATACAAATTTTATTTCATTGTCATGCAGAATGGTaGAGAGACTCAAAGATTCCT +
Preference number: 4 (lower is better)
Translates to: SKEFLSRTMAQRIQILFHCHAEW*RDSKIP
Trigger: AGGAATCTTTGAGTCTCTTCACCATTCTGCATGACA...ATGAAATAAAATTTGTATTCTCTGTGCCATCGTCCTGGACAGAAATTCCTTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR TCA 90 bp TCCCATGTACTTGCGTTGAAAAGAACACGTCTCTCTCCAATTAAATCTTGTTCCAGATGTACAATGACTTaGAGAGGATATAGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: SHVLALKRTRLSPIKSCSRCTMT*RGYSCH
Trigger: ATGACAGCTATATCCTCTTCAAGTCATTGTACATCT...GGAACAAGATTTAATTGGAGAGAGACGTGTTCTTTTCAACGCAAGTACATGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR TCA 90 bp TTGGTTTGCATCCTTACCAGGAAGCAAAACTCCAAAGAGTTTCCCTACTTACTATCATTCTTAAGGACATaGAAGCTGTTCCTGAGAATA +
Preference number: 4 (lower is better)
Translates to: LVCILTRKQNSKEFPYLLSFLRT*KLFLRI
Trigger: TATTCTCAGGAACAGCTTTCATGTCCTTAAGAATGA...TAGTAAGTAGGGAAACTCTTTGGAGTTTTGCTTCCTGGTAAGGATGCAAACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636213.3
CDS-3UTR GCA 90 bp ACCTGCTATTGCTATTCAATAGACTTTTATTCCTCCTGGGTCCCAGCATCTGTTGAAGTATCTGATACCTaGTATTGCTATTCAATAGAC +
Preference number: 4 (lower is better)
Translates to: TCYCYSIDFYSSWVPASVEVSDT*YCYSID
Trigger: GTCTATTGAATAGCAATAGCAGGTATCAGATACTTC...AACAGATGCTGGGACCCAGGAGGAATAAAAGTCTATTGAATAGCAATAGCAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649478.1
3UTR CAA 72 bp CTGGTGAAACTCTGCTGGAAACCAACTCACCAGCAATaGCCATTAATCTACTTACTAATTAAGCCAATTCAT +
Preference number: 4 (lower is better)
Translates to: LVKLCWKPTHQQ*PLIYLLIKPIH
Trigger: ATGAATTGGCTTAATTAGTAAGTAGATTAATGGCAATTGCTGGTGAGTTGGTTTCCAGCAGAGTTTCACCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR CAA 72 bp AAATTCCTTTCTTTAGCCAAACTGATGGGAGGAAATTaGAAAGAAGCGCCAAACTGTGTAACTGTAATTCAG +
Preference number: 4 (lower is better)
Translates to: KFLSLAKLMGGN*KEAPNCVTVIQ
Trigger: CTGAATTACAGTTACACAGTTTGGCGCTTCTTTCAAATTTCCTCCCATCAGTTTGGCTAAAGAAAGGAATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR GCA 90 bp GAAGTATCTGATACCTGCTATTGCTATTCAATAGACTTTTATTCCTCCTGGGTCTCTACCTCAAAGAATTaGTGGTACATTCCTTTGATA +
Preference number: 4 (lower is better)
Translates to: EVSDTCYCYSIDFYSSWVSTSKN*WYIPLI
Trigger: TATCAAAGGAATGTACCAGCAATTCTTTGAGGTAGA...GACCCAGGAGGAATAAAAGTCTATTGAATAGCAATAGCAGGTATCAGATACTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649478.1
CDS-3UTR GCA 90 bp CTTCCAAGGAATTTCTGTCCAGGACGATGGCACAGAGAATACAAATTTTATTTCTGGAGACCTTTATTGTaGCATTTGAAACTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: LPRNFCPGRWHREYKFYFWRPLL*HLKLCF
Trigger: AAAGCAAAGTTTCAAATGGCACAATAAAGGTCTCCA...GAAATAAAATTTGTATTCTCTGTGCCATCGTCCTGGACAGAAATTCCTTGGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
3UTR CAA 72 bp CATCTGTTAGCCTTTCCAAATCAAACAATCAGCTTCTaGTTCTTAGAACTTAAGAATAAAATCCTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: HLLAFPNQTISF*FLELKNKILSS
Trigger: GCTGGAGAGGATTTTATTCTTAAGTTCTAAGAACAAGAAGCTGATTGTTTGATTTGGAAAGGCTAACAGATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649478.1
CDS-3UTR CAA 90 bp CCTTACACCAGGACGGCGAGGCCACTCTTTCTGAGGCCCCGTCTGCGCAGCCCACCTGAATGGATGTGGTaGCCCCGGAGGTTCAGTGCG +
Preference number: 5 (lower is better)
Translates to: PYTRTARPLFLRPRLRSPPEWMW*PRRFSA
Trigger: CGCACTGAACCTCCGGGGCAACCACATCCATTCAGG...TGGGCTGCGCAGACGGGGCCTCAGAAAGAGTGGCCTCGCCGTCCTGGTGTAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CAA 90 bp TGTGGTTGCCCCGGAGGTTCAGTGCGCCCCGCTCACCCAGCACCAGCCAGGGCTGAGGCTTCTCTCCCCTaGGCTGATCTTGCAACCTTT +
Preference number: 5 (lower is better)
Translates to: CGCPGGSVRPAHPAPARAEASLP*ADLATF
Trigger: AAAGGTTGCAAGATCAGCCAAGGGGAGAGAAGCCTC...AGCCCTGGCTGGTGCTGGGTGAGCGGGGCGCACTGAACCTCCGGGGCAACCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS GCA 90 bp AGACCCGCAGCTCGGTGGCCTTGGCTTTCATGGCCTCCCAGCGTGTaGCAAAGGTCCCCCTCAAGGAGGAGGAAAAGCAGTGAACCCATC +
Preference number: 5 (lower is better)
Translates to: RPAARWPWLSWPPSV*QRSPSRRRKSSEPI
Trigger: GATGGGTTCACTGCTTTTCCTCCTCCTTGAGGGGGACCTTTGGCACACGCTGGGAGGCCATGAAAGCCAAGGCCACCGAGCTGCGGGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323327.5
ENST00000636213.3
ENST00000673651.1
CDS-3UTR CAA 90 bp GCCAGGGCTTTCCTTAAAGGCGTGGAAAGGAGCGCGCACAAGGCGCGCATTGAGCGCATTTGCGGGGGCTaGAATTCCCGAGCTTCTCGC +
Preference number: 5 (lower is better)
Translates to: ARAFLKGVERSAHKARIERICGG*NSRASR
Trigger: GCGAGAAGCTCGGGAATTCAAGCCCCCGCAAATGCG...CTCAATGCGCGCCTTGTGCGCGCTCCTTTCCACGCCTTTAAGGAAAGCCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CAA 90 bp GAAGGTGGAGCTTCACCAGCGACACATCCCTTTCCACTCGGGAGCCTGTCGCTTCGCATTTGCGGGGGCTaGAATTCCCGAGCTTCTCGC +
Preference number: 5 (lower is better)
Translates to: EGGASPATHPFPLGSLSLRICGG*NSRASR
Trigger: GCGAGAAGCTCGGGAATTCAAGCCCCCGCAAATGCG...AAGCGACAGGCTCCCGAGTGGAAAGGGATGTGTCGCTGGTGAAGCTCCACCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CAA 90 bp GTATCCTTTCCGAGGGAGGCACCTTACACCAGGACGGCGAGGCCACTCTTTCTGGTGCTGGGTGGAGACTaGGGCCATGGGGACAAAGAG +
Preference number: 5 (lower is better)
Translates to: VSFPREAPYTRTARPLFLVLGGD*GHGDKE
Trigger: CTCTTTGTCCCCATGGCCCAAGTCTCCACCCAGCAC...CAGAAAGAGTGGCCTCGCCGTCCTGGTGTAAGGTGCCTCCCTCGGAAAGGATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CAA 90 bp GAGGCAGGGCAAGTCCAGGGTTACTTTCATGGCTCCATGACATTACCAAGGACCCGCAGCTCGGTGGCCTaGGCTTTCATGGCCTCCCAG +
Preference number: 5 (lower is better)
Translates to: EAGQVQGYFHGSMTLPRTRSSVA*AFMASQ
Trigger: CTGGGAGGCCATGAAAGCCAAGGCCACCGAGCTGCG...GGTCCTTGGTAATGTCATGGAGCCATGAAAGTAACCCTGGACTTGCCCTGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CAA 90 bp CCCCACTTCTGCCAGAGTCTGGCTGAGTCTAGGGTTTTTATGGGCTTCAGAGGGCAGGCCACCCCTGGGTaGAAGGTGGAGCTTCACCAG +
Preference number: 5 (lower is better)
Translates to: PHFCQSLAESRVFMGFRGQATPG*KVELHQ
Trigger: CTGGTGAAGCTCCACCTTCAACCCAGGGGTGGCCTG...CCCTCTGAAGCCCATAAAAACCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CAA 90 bp TTACACCAGGACGGCGAGGCCACTCTTTCTGAGGCCCCGTCTGCGCAGCCCAGGGACTCCAAACCATGTTaGTCTTCAACCACAGCTTGG +
Preference number: 5 (lower is better)
Translates to: LHQDGEATLSEAPSAQPRDSKPC*SSTTAW
Trigger: CCAAGCTGTGGTTGAAGACAAACATGGTTTGGAGTC...CCTGGGCTGCGCAGACGGGGCCTCAGAAAGAGTGGCCTCGCCGTCCTGGTGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS CCA 90 bp TACACTCATGGTCGCAGAATGTGGCCTCAAAGCTGTGGTGCTGGGTaGAGACTTGGGCCATGGGGACAAAGAGGCTTCTCTCCCCTTGGC +
Preference number: 5 (lower is better)
Translates to: YTHGRRMWPQSCGAG*RLGPWGQRGFSPLG
Trigger: GCCAAGGGGAGAGAAGCCTCTTTGTCCCCATGGCCCAAGTCTCCACCCAGCACCACAGCTTTGAGGCCACATTCTGCGACCATGAGTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CAA 90 bp CAAGAGCACAGGGATGCCTGGGTCTGCAGCCATGGCTGGGCAGCTGCAGCTGCCATCAGATTCCACCTCTaGATGGGAGAGAAACATTGC +
Preference number: 5 (lower is better)
Translates to: QEHRDAWVCSHGWAAAAAIRFHL*MGEKHC
Trigger: GCAATGTTTCTCTCCCATCAAGAGGTGGAATCTGAT...GGCAGCTGCAGCTGCCCAGCCATGGCTGCAGACCCAGGCATCCCTGTGCTCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CAA 90 bp CTGCTTGTTCCTGGCTCCTGCCAGCTTAGTAGAGTGTACAGCCCTGGCCATATCGCCTCCCTCCCATGCTaGTTGGCACCCAAACTCTGG +
Preference number: 5 (lower is better)
Translates to: LLVPGSCQLSRVYSPGHIASLPC*LAPKLW
Trigger: CCAGAGTTTGGGTGCCAACAAGCATGGGAGGGAGGC...GATATGGCCAGGGCTGTACACTCTACTAAGCTGGCAGGAGCCAGGAACAAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CAA 90 bp TCACACCCAACCAGGAGGCTGCTTCCAAGGAATTTCTGTCCAGGACGATGGCACGTGCTGGGTGGAGACTaGGGCCATGGGGACAAAGAG +
Preference number: 5 (lower is better)
Translates to: SHPTRRLLPRNFCPGRWHVLGGD*GHGDKE
Trigger: CTCTTTGTCCCCATGGCCCAAGTCTCCACCCAGCAC...GTGCCATCGTCCTGGACAGAAATTCCTTGGAAGCAGCCTCCTGGTTGGGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CAA 90 bp CCTTACACCAGGACGGCGAGGCCACTCTTTCTGAGGCCCCGTCTGCGCAGCCCACTGATGGGAGGAAATTaGAAAGAAGCGCCAAACTGT +
Preference number: 5 (lower is better)
Translates to: PYTRTARPLFLRPRLRSPLMGGN*KEAPNC
Trigger: ACAGTTTGGCGCTTCTTTCAAATTTCCTCCCATCAG...TGGGCTGCGCAGACGGGGCCTCAGAAAGAGTGGCCTCGCCGTCCTGGTGTAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CAA 90 bp GCCAGGGCTTTCCTTAAAGGCGTGGAAAGGAGCGCGCACAAGGCGCGCATTGAGTGTAGGGTTGATTGGTaGGTGGAAATGGCTGGCAGC +
Preference number: 5 (lower is better)
Translates to: ARAFLKGVERSAHKARIECRVDW*VEMAGS
Trigger: GCTGCCAGCCATTTCCACCAACCAATCAACCCTACA...CTCAATGCGCGCCTTGTGCGCGCTCCTTTCCACGCCTTTAAGGAAAGCCCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CAA 90 bp AAAGTCCGTCCCTTCCCACTCTTAGACGCCTGGGCTCTTCTGAGTCCCCGGAGCTGTAGGGTTGATTGGTaGGTGGAAATGGCTGGCAGC +
Preference number: 5 (lower is better)
Translates to: KVRPFPLLDAWALLSPRSCRVDW*VEMAGS
Trigger: GCTGCCAGCCATTTCCACCAACCAATCAACCCTACA...GCTCCGGGGACTCAGAAGAGCCCAGGCGTCTAAGAGTGGGAAGGGACGGACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CAA 90 bp ACACAGTTTGGCACAGAGTCACAGAGATCGTTAGCAGAGCAATCTGTCCTGGGACGCAGCTCGGTGGCCTaGGCTTTCATGGCCTCCCAG +
Preference number: 5 (lower is better)
Translates to: TQFGTESQRSLAEQSVLGRSSVA*AFMASQ
Trigger: CTGGGAGGCCATGAAAGCCAAGGCCACCGAGCTGCG...TCCCAGGACAGATTGCTCTGCTAACGATCTCTGTGACTCTGTGCCAAACTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CAA 90 bp AACACAGTTTGGCACAGAGTCACAGAGATCGTTAGCAGAGCAATCTGTCCTGGGCGTGGACCCGCGCATTaGCGGGGGCTTGAATTCCCG +
Preference number: 5 (lower is better)
Translates to: NTVWHRVTEIVSRAICPGRGPAH*RGLEFP
Trigger: CGGGAATTCAAGCCCCCGCAAATGCGCGGGTCCACG...CCCAGGACAGATTGCTCTGCTAACGATCTCTGTGACTCTGTGCCAAACTGTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CAA 90 bp TGTGTTTATCAGCAAGTCACTAAGGGCAGCCCTGATTCAAGGGAGGGGAATCAGCGTGGACCCGCGCATTaGCGGGGGCTTGAATTCCCG +
Preference number: 5 (lower is better)
Translates to: CVYQQVTKGSPDSREGNQRGPAH*RGLEFP
Trigger: CGGGAATTCAAGCCCCCGCAAATGCGCGGGTCCACG...CTGATTCCCCTCCCTTGAATCAGGGCTGCCCTTAGTGACTTGCTGATAAACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CAA 90 bp CCTTACACCAGGACGGCGAGGCCACTCTTTCTGAGGCCCCGTCTGCGCAGCCCACTGTGGAGACCTTTATaGTGCCATTTGAAACTTTGC +
Preference number: 5 (lower is better)
Translates to: PYTRTARPLFLRPRLRSPLWRPL*CHLKLC
Trigger: GCAAAGTTTCAAATGGCACAATAAAGGTCTCCACAG...TGGGCTGCGCAGACGGGGCCTCAGAAAGAGTGGCCTCGCCGTCCTGGTGTAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS CCA 90 bp ATGATACACTCATGGTCGCAGAATGTGGCCTCAAAGCTGTGGTGCTaGGTGGAGACTTGGGCCATGGGGACAAAGAGGCTTCTCTCCCCT +
Preference number: 5 (lower is better)
Translates to: MIHSWSQNVASKLWC*VETWAMGTKRLLSP
Trigger: AGGGGAGAGAAGCCTCTTTGTCCCCATGGCCCAAGTCTCCACCCAGCACCACAGCTTTGAGGCCACATTCTGCGACCATGAGTGTATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS CCA 90 bp CAGCAGATGATACACTCATGGTCGCAGAATGTGGCCTCAAAGCTGTaGTGCTGGGTGGAGACTTGGGCCATGGGGACAAAGAGGCTTCTC +
Preference number: 5 (lower is better)
Translates to: QQMIHSWSQNVASKL*CWVETWAMGTKRLL
Trigger: GAGAAGCCTCTTTGTCCCCATGGCCCAAGTCTCCACCCAGCACCACAGCTTTGAGGCCACATTCTGCGACCATGAGTGTATCATCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CAA 90 bp AACGCTCCACAGCGCTATACCATCCCATGTACTTGCGTTGAAAAGAACACGTCTCGCAGCTCGGTGGCCTaGGCTTTCATGGCCTCCCAG +
Preference number: 5 (lower is better)
Translates to: NAPQRYTIPCTCVEKNTSRSSVA*AFMASQ
Trigger: CTGGGAGGCCATGAAAGCCAAGGCCACCGAGCTGCG...AGACGTGTTCTTTTCAACGCAAGTACATGGGATGGTATAGCGCTGTGGAGCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CAA 90 bp ACGGTGTCTGGCATTCCAGCAGAATCTTGGTTTGCATCCTTACCAGGAAGCAAACGCAGCTCGGTGGCCTaGGCTTTCATGGCCTCCCAG +
Preference number: 5 (lower is better)
Translates to: TVSGIPAESWFASLPGSKRSSVA*AFMASQ
Trigger: CTGGGAGGCCATGAAAGCCAAGGCCACCGAGCTGCG...TTTGCTTCCTGGTAAGGATGCAAACCAAGATTCTGCTGGAATGCCAGACACCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CAA 90 bp CCTCTCTGCAGGCAGGTCATCCCCACTTCTGCCAGAGTCTGGCTGAGTCTAGGGTTCACTGGAATCAGTTaGAGTGGCATGGTCTGTGCT +
Preference number: 5 (lower is better)
Translates to: PLCRQVIPTSARVWLSLGFTGIS*SGMVCA
Trigger: AGCACAGACCATGCCACTCAAACTGATTCCAGTGAA...CCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGGATGACCTGCCTGCAGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CAA 90 bp TGTGTTTATCAGCAAGTCACTAAGGGCAGCCCTGATTCAAGGGAGGGGAATCAGGAGCACCACTCCTGCTaGTTCCTGGCTCCTGCCAGC +
Preference number: 5 (lower is better)
Translates to: CVYQQVTKGSPDSREGNQEHHSC*FLAPAS
Trigger: GCTGGCAGGAGCCAGGAACAAGCAGGAGTGGTGCTC...CTGATTCCCCTCCCTTGAATCAGGGCTGCCCTTAGTGACTTGCTGATAAACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CAA 90 bp ACCAGGAGGCTGCTTCCAAGGAATTTCTGTCCAGGACGATGGCACAGAGAATACCGCACAAGGCGCGCATaGAGGTCTATTCGAGCGCAG +
Preference number: 5 (lower is better)
Translates to: TRRLLPRNFCPGRWHREYRTRRA*RSIRAQ
Trigger: CTGCGCTCGAATAGACCTCAATGCGCGCCTTGTGCG...GTATTCTCTGTGCCATCGTCCTGGACAGAAATTCCTTGGAAGCAGCCTCCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CAA 90 bp CCGCCTTTTGGTAAACGGTGTCTGGCATTCCAGCAGAATCTTGGTTTGCATCCTCGCATTTGCGGGGGCTaGAATTCCCGAGCTTCTCGC +
Preference number: 5 (lower is better)
Translates to: PPFGKRCLAFQQNLGLHPRICGG*NSRASR
Trigger: GCGAGAAGCTCGGGAATTCAAGCCCCCGCAAATGCG...AGGATGCAAACCAAGATTCTGCTGGAATGCCAGACACCGTTTACCAAAAGGCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CAA 90 bp GAGCTCCCATACAAAGGGAGAGGACCCAAAGAGGGTAGCCCTCTATGTGTATTACGCATTTGCGGGGGCTaGAATTCCCGAGCTTCTCGC +
Preference number: 5 (lower is better)
Translates to: ELPYKGRGPKEGSPLCVLRICGG*NSRASR
Trigger: GCGAGAAGCTCGGGAATTCAAGCCCCCGCAAATGCG...TAATACACATAGAGGGCTACCCTCTTTGGGTCCTCTCCCTTTGTATGGGAGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649478.1
CDS-3UTR CAA 90 bp TGTGTTTATCAGCAAGTCACTAAGGGCAGCCCTGATTCAAGGGAGGGGAATCAGGCCTCCCTCCCATGCTaGTTGGCACCCAAACTCTGG +
Preference number: 5 (lower is better)
Translates to: CVYQQVTKGSPDSREGNQASLPC*LAPKLW
Trigger: CCAGAGTTTGGGTGCCAACAAGCATGGGAGGGAGGC...CTGATTCCCCTCCCTTGAATCAGGGCTGCCCTTAGTGACTTGCTGATAAACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CAA 90 bp AACCAGGAGGCTGCTTCCAAGGAATTTCTGTCCAGGACGATGGCACAGAGAATACCTGAATGGATGTGGTaGCCCCGGAGGTTCAGTGCG +
Preference number: 5 (lower is better)
Translates to: NQEAASKEFLSRTMAQRIPEWMW*PRRFSA
Trigger: CGCACTGAACCTCCGGGGCAACCACATCCATTCAGG...TATTCTCTGTGCCATCGTCCTGGACAGAAATTCCTTGGAAGCAGCCTCCTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CAA 90 bp CACAGAGTCACAGAGATCGTTAGCAGAGCAATCTGTCCTGGGATGTTTTCAGCTCGCATTTGCGGGGGCTaGAATTCCCGAGCTTCTCGC +
Preference number: 5 (lower is better)
Translates to: HRVTEIVSRAICPGMFSARICGG*NSRASR
Trigger: GCGAGAAGCTCGGGAATTCAAGCCCCCGCAAATGCG...AGCTGAAAACATCCCAGGACAGATTGCTCTGCTAACGATCTCTGTGACTCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CAA 90 bp CGCATTGAGGTCTATTCGAGCGCAGTGCTGGTTAATATACATAATCTGGAGAGACGTGGACCCGCGCATTaGCGGGGGCTTGAATTCCCG +
Preference number: 5 (lower is better)
Translates to: RIEVYSSAVLVNIHNLERRGPAH*RGLEFP
Trigger: CGGGAATTCAAGCCCCCGCAAATGCGCGGGTCCACG...TCTCTCCAGATTATGTATATTAACCAGCACTGCGCTCGAATAGACCTCAATGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CAA 90 bp GAAGGTGGAGCTTCACCAGCGACACATCCCTTTCCACTCGGGAGCCTGTCGCTTTCTTATCTTTCCACCTaGCTACCTTCAGCACATCCA +
Preference number: 5 (lower is better)
Translates to: EGGASPATHPFPLGSLSLSYLST*LPSAHP
Trigger: TGGATGTGCTGAAGGTAGCAAGGTGGAAAGATAAGA...AAGCGACAGGCTCCCGAGTGGAAAGGGATGTGTCGCTGGTGAAGCTCCACCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CAA 90 bp TTGGAAACACAGTTTGGCACAGAGTCACAGAGATCGTTAGCAGAGCAATCTGTCGAGCACCACTCCTGCTaGTTCCTGGCTCCTGCCAGC +
Preference number: 5 (lower is better)
Translates to: LETQFGTESQRSLAEQSVEHHSC*FLAPAS
Trigger: GCTGGCAGGAGCCAGGAACAAGCAGGAGTGGTGCTC...GACAGATTGCTCTGCTAACGATCTCTGTGACTCTGTGCCAAACTGTGTTTCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CAA 90 bp TTGGAAACACAGTTTGGCACAGAGTCACAGAGATCGTTAGCAGAGCAATCTGTCCAGGCCACCCCTGGGTaGAAGGTGGAGCTTCACCAG +
Preference number: 5 (lower is better)
Translates to: LETQFGTESQRSLAEQSVQATPG*KVELHQ
Trigger: CTGGTGAAGCTCCACCTTCAACCCAGGGGTGGCCTG...GACAGATTGCTCTGCTAACGATCTCTGTGACTCTGTGCCAAACTGTGTTTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CAA 90 bp CTTCCCACTCTTAGACGCCTGGGCTCTTCTGAGTCCCCGGAGCTCCTGAATGGATCCCATGTACTTGCGTaGAAAAGAACACGTCTCTCT +
Preference number: 5 (lower is better)
Translates to: LPTLRRLGSSESPELLNGSHVLA*KRTRLS
Trigger: AGAGAGACGTGTTCTTTTCAACGCAAGTACATGGGA...TCCATTCAGGAGCTCCGGGGACTCAGAAGAGCCCAGGCGTCTAAGAGTGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CAA 90 bp CTTCCCACTCTTAGACGCCTGGGCTCTTCTGAGTCCCCGGAGCTCCTGAATGGACTGTTTCTTGTAGGGTaGATTGGTTGGTGGAAATGG +
Preference number: 5 (lower is better)
Translates to: LPTLRRLGSSESPELLNGLFLVG*IGWWKW
Trigger: CCATTTCCACCAACCAATCAACCCTACAAGAAACAG...TCCATTCAGGAGCTCCGGGGACTCAGAAGAGCCCAGGCGTCTAAGAGTGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CAA 90 bp ACCTGCTATTGCTATTCAATAGACTTTTATTCCTCCTGGGTCCCAGCATCTGTTCGCAGCTCGGTGGCCTaGGCTTTCATGGCCTCCCAG +
Preference number: 5 (lower is better)
Translates to: TCYCYSIDFYSSWVPASVRSSVA*AFMASQ
Trigger: CTGGGAGGCCATGAAAGCCAAGGCCACCGAGCTGCG...AACAGATGCTGGGACCCAGGAGGAATAAAAGTCTATTGAATAGCAATAGCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649478.1
CDS-3UTR CAA 90 bp CCCCACTTCTGCCAGAGTCTGGCTGAGTCTAGGGTTTTTATGGGCTTCAGAGGGGTGTCACAGATGCCTTaGGAAACACAGTTTGGCACA +
Preference number: 5 (lower is better)
Translates to: PHFCQSLAESRVFMGFRGVSQMP*ETQFGT
Trigger: TGTGCCAAACTGTGTTTCCAAAGGCATCTGTGACAC...CCCTCTGAAGCCCATAAAAACCCTAGACTCAGCCAGACTCTGGCAGAAGTGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CAA 90 bp ACCAAGTTGGACATTACGCATGGAAGAAAAGCAAACCCGCCTTTTGGTAAACGGCGCACAAGGCGCGCATaGAGGTCTATTCGAGCGCAG +
Preference number: 5 (lower is better)
Translates to: TKLDITHGRKANPPFGKRRTRRA*RSIRAQ
Trigger: CTGCGCTCGAATAGACCTCAATGCGCGCCTTGTGCG...CCGTTTACCAAAAGGCGGGTTTGCTTTTCTTCCATGCGTAATGTCCAACTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CAA 90 bp AATAGAAAGAACCAAGTTGGACATTACGCATGGAAGAAAAGCAAACCCGCCTTTCGTGGACCCGCGCATTaGCGGGGGCTTGAATTCCCG +
Preference number: 5 (lower is better)
Translates to: NRKNQVGHYAWKKSKPAFRGPAH*RGLEFP
Trigger: CGGGAATTCAAGCCCCCGCAAATGCGCGGGTCCACG...AAAGGCGGGTTTGCTTTTCTTCCATGCGTAATGTCCAACTTGGTTCTTTCTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CAA 90 bp TATTCAATAGACTTTTATTCCTCCTGGGTCCCAGCATCTGTTAGCCTTTCCAAACGTGGACCCGCGCATTaGCGGGGGCTTGAATTCCCG +
Preference number: 5 (lower is better)
Translates to: YSIDFYSSWVPASVSLSKRGPAH*RGLEFP
Trigger: CGGGAATTCAAGCCCCCGCAAATGCGCGGGTCCACG...TTTGGAAAGGCTAACAGATGCTGGGACCCAGGAGGAATAAAAGTCTATTGAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649478.1
CDS-3UTR CAA 90 bp GAGGCAGGGCAAGTCCAGGGTTACTTTCATGGCTCCATGACATTACCAAGGACCATCAGATTCCACCTCTaGATGGGAGAGAAACATTGC +
Preference number: 5 (lower is better)
Translates to: EAGQVQGYFHGSMTLPRTIRFHL*MGEKHC
Trigger: GCAATGTTTCTCTCCCATCAAGAGGTGGAATCTGAT...GGTCCTTGGTAATGTCATGGAGCCATGAAAGTAACCCTGGACTTGCCCTGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CAA 90 bp ACACAGTTTGGCACAGAGTCACAGAGATCGTTAGCAGAGCAATCTGTCCTGGGAGGCTTGGCCACAACTTaGCTTCAAAATCAGAGTGGG +
Preference number: 5 (lower is better)
Translates to: TQFGTESQRSLAEQSVLGGLATT*LQNQSG
Trigger: CCCACTCTGATTTTGAAGCAAAGTTGTGGCCAAGCC...TCCCAGGACAGATTGCTCTGCTAACGATCTCTGTGACTCTGTGCCAAACTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CAA 90 bp CCGCCTTTTGGTAAACGGTGTCTGGCATTCCAGCAGAATCTTGGTTTGCATCCTCCAAGGACTCTTCTTTaGGGGATTCCGACAACTTCC +
Preference number: 5 (lower is better)
Translates to: PPFGKRCLAFQQNLGLHPPRTLL*GIPTTS
Trigger: GGAAGTTGTCGGAATCCCCAAAAGAAGAGTCCTTGG...AGGATGCAAACCAAGATTCTGCTGGAATGCCAGACACCGTTTACCAAAAGGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CAA 90 bp GAAACAGAGCTCCCATACAAAGGGAGAGGACCCAAAGAGGGTAGCCCTCTATGTTTCCAAGTTGGCTTCTaGGAAGCTCTGGCTTGGAAA +
Preference number: 5 (lower is better)
Translates to: ETELPYKGRGPKEGSPLCFQVGF*EALAWK
Trigger: TTTCCAAGCCAGAGCTTCCAAGAAGCCAACTTGGAA...ACATAGAGGGCTACCCTCTTTGGGTCCTCTCCCTTTGTATGGGAGCTCTGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649478.1
CDS-3UTR CAA 90 bp ACGCATGGAAGAAAAGCAAACCCGCCTTTTGGTAAACGGTGTCTGGCATTCCAGTTCACTGGAATCAGTTaGAGTGGCATGGTCTGTGCT +
Preference number: 5 (lower is better)
Translates to: THGRKANPPFGKRCLAFQFTGIS*SGMVCA
Trigger: AGCACAGACCATGCCACTCAAACTGATTCCAGTGAA...CTGGAATGCCAGACACCGTTTACCAAAAGGCGGGTTTGCTTTTCTTCCATGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CAA 90 bp GAGCTCCCATACAAAGGGAGAGGACCCAAAGAGGGTAGCCCTCTATGTGTATTATTCACTGGAATCAGTTaGAGTGGCATGGTCTGTGCT +
Preference number: 5 (lower is better)
Translates to: ELPYKGRGPKEGSPLCVLFTGIS*SGMVCA
Trigger: AGCACAGACCATGCCACTCAAACTGATTCCAGTGAA...TAATACACATAGAGGGCTACCCTCTTTGGGTCCTCTCCCTTTGTATGGGAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649478.1
CDS-3UTR CAA 90 bp ACACAGTTTGGCACAGAGTCACAGAGATCGTTAGCAGAGCAATCTGTCCTGGGATTCACTGGAATCAGTTaGAGTGGCATGGTCTGTGCT +
Preference number: 5 (lower is better)
Translates to: TQFGTESQRSLAEQSVLGFTGIS*SGMVCA
Trigger: AGCACAGACCATGCCACTCAAACTGATTCCAGTGAA...TCCCAGGACAGATTGCTCTGCTAACGATCTCTGTGACTCTGTGCCAAACTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CAA 90 bp GGCTCCATGACATTACCAAGGACCCCTCTGCTTCTTATCTTTCCACCTTGCTACGTGTCACAGATGCCTTaGGAAACACAGTTTGGCACA +
Preference number: 5 (lower is better)
Translates to: GSMTLPRTPLLLIFPPCYVSQMP*ETQFGT
Trigger: TGTGCCAAACTGTGTTTCCAAAGGCATCTGTGACAC...GTAGCAAGGTGGAAAGATAAGAAGCAGAGGGGTCCTTGGTAATGTCATGGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CAA 90 bp TCACACCCAACCAGGAGGCTGCTTCCAAGGAATTTCTGTCCAGGACGATGGCACTTTCTAGGTTTGATTTaGGAGAGCTGGTTTCTTTGG +
Preference number: 5 (lower is better)
Translates to: SHPTRRLLPRNFCPGRWHFLGLI*ESWFLW
Trigger: CCAAAGAAACCAGCTCTCCAAAATCAAACCTAGAAA...GTGCCATCGTCCTGGACAGAAATTCCTTGGAAGCAGCCTCCTGGTTGGGTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CAA 90 bp GAAGTATCTGATACCTGCTATTGCTATTCAATAGACTTTTATTCCTCCTGGGTCAGCTCTGGACCATGGTaGGGCCTGGGACATCCGGTG +
Preference number: 5 (lower is better)
Translates to: EVSDTCYCYSIDFYSSWVSSGPW*GLGHPV
Trigger: CACCGGATGTCCCAGGCCCAACCATGGTCCAGAGCT...GACCCAGGAGGAATAAAAGTCTATTGAATAGCAATAGCAGGTATCAGATACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649478.1
CDS-3UTR CAA 90 bp CGGTGTCTGGCATTCCAGCAGAATCTTGGTTTGCATCCTTACCAGGAAGCAAAATTCACTGGAATCAGTTaGAGTGGCATGGTCTGTGCT +
Preference number: 5 (lower is better)
Translates to: RCLAFQQNLGLHPYQEAKFTGIS*SGMVCA
Trigger: AGCACAGACCATGCCACTCAAACTGATTCCAGTGAA...TTTTGCTTCCTGGTAAGGATGCAAACCAAGATTCTGCTGGAATGCCAGACACCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CAA 90 bp TGTGTTTATCAGCAAGTCACTAAGGGCAGCCCTGATTCAAGGGAGGGGAATCAGTCTTATCTTTCCACCTaGCTACCTTCAGCACATCCA +
Preference number: 5 (lower is better)
Translates to: CVYQQVTKGSPDSREGNQSYLST*LPSAHP
Trigger: TGGATGTGCTGAAGGTAGCAAGGTGGAAAGATAAGA...CTGATTCCCCTCCCTTGAATCAGGGCTGCCCTTAGTGACTTGCTGATAAACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CAA 90 bp ACACAGTTTGGCACAGAGTCACAGAGATCGTTAGCAGAGCAATCTGTCCTGGGACTTTGGAAACACAGTTaGGCACAGAGTCACAGAGAT +
Preference number: 5 (lower is better)
Translates to: TQFGTESQRSLAEQSVLGLWKHS*AQSHRD
Trigger: ATCTCTGTGACTCTGTGCCAAACTGTGTTTCCAAAG...TCCCAGGACAGATTGCTCTGCTAACGATCTCTGTGACTCTGTGCCAAACTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CAA 90 bp ACGGTGTCTGGCATTCCAGCAGAATCTTGGTTTGCATCCTTACCAGGAAGCAAATCCCCTTGGCTGATCTaGCAACCTTTACACTTAAGC +
Preference number: 5 (lower is better)
Translates to: TVSGIPAESWFASLPGSKSPWLI*QPLHLS
Trigger: GCTTAAGTGTAAAGGTTGCAAGATCAGCCAAGGGGA...TTTGCTTCCTGGTAAGGATGCAAACCAAGATTCTGCTGGAATGCCAGACACCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CAA 90 bp TGGCATTCCAGCAGAATCTTGGTTTGCATCCTTACCAGGAAGCAAAACTCCAAAGAGGCTTCTCTCCCCTaGGCTGATCTTGCAACCTTT +
Preference number: 5 (lower is better)
Translates to: WHSSRILVCILTRKQNSKEASLP*ADLATF
Trigger: AAAGGTTGCAAGATCAGCCAAGGGGAGAGAAGCCTC...TTTGGAGTTTTGCTTCCTGGTAAGGATGCAAACCAAGATTCTGCTGGAATGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CAA 90 bp CACAAGGCGCGCATTGAGGTCTATTCGAGCGCAGTGCTGGTTAATATACATAATGACTCCAAACCATGTTaGTCTTCAACCACAGCTTGG +
Preference number: 5 (lower is better)
Translates to: HKARIEVYSSAVLVNIHNDSKPC*SSTTAW
Trigger: CCAAGCTGTGGTTGAAGACAAACATGGTTTGGAGTC...ATTATGTATATTAACCAGCACTGCGCTCGAATAGACCTCAATGCGCGCCTTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CAA 90 bp TGGCATTCCAGCAGAATCTTGGTTTGCATCCTTACCAGGAAGCAAAACTCCAAACCAAGGACTCTTCTTTaGGGGATTCCGACAACTTCC +
Preference number: 5 (lower is better)
Translates to: WHSSRILVCILTRKQNSKPRTLL*GIPTTS
Trigger: GGAAGTTGTCGGAATCCCCAAAAGAAGAGTCCTTGG...TTTGGAGTTTTGCTTCCTGGTAAGGATGCAAACCAAGATTCTGCTGGAATGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CAA 90 bp GTGTCTGGCATTCCAGCAGAATCTTGGTTTGCATCCTTACCAGGAAGCAAAACTCATTCCAGCAGAATCTaGGTTTGCATCCTTACCAGG +
Preference number: 5 (lower is better)
Translates to: VSGIPAESWFASLPGSKTHSSRI*VCILTR
Trigger: CCTGGTAAGGATGCAAACCAAGATTCTGCTGGAATG...AGTTTTGCTTCCTGGTAAGGATGCAAACCAAGATTCTGCTGGAATGCCAGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CAA 90 bp ACCAGGAGGCTGCTTCCAAGGAATTTCTGTCCAGGACGATGGCACAGAGAATACTTTCCTTTTCTAGGTTaGATTTTGGAGAGCTGGTTT +
Preference number: 5 (lower is better)
Translates to: TRRLLPRNFCPGRWHREYFPFLG*ILESWF
Trigger: AAACCAGCTCTCCAAAATCAAACCTAGAAAAGGAAA...GTATTCTCTGTGCCATCGTCCTGGACAGAAATTCCTTGGAAGCAGCCTCCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CAA 90 bp CGCATTGAGGTCTATTCGAGCGCAGTGCTGGTTAATATACATAATCTGGAGAGATCCCCTTGGCTGATCTaGCAACCTTTACACTTAAGC +
Preference number: 5 (lower is better)
Translates to: RIEVYSSAVLVNIHNLERSPWLI*QPLHLS
Trigger: GCTTAAGTGTAAAGGTTGCAAGATCAGCCAAGGGGA...TCTCTCCAGATTATGTATATTAACCAGCACTGCGCTCGAATAGACCTCAATGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CAA 90 bp AAAGAAGCGCCAAACTGTGTAACTGTAATTCAGCCAAGGACTGCTAAAACAAGGAAGCAAACCCGCCTTTaGGTAAACGGTGTCTGGCAT +
Preference number: 5 (lower is better)
Translates to: KEAPNCVTVIQPRTAKTRKQTRL*VNGVWH
Trigger: ATGCCAGACACCGTTTACCAAAAGGCGGGTTTGCTT...CCTTGTTTTAGCAGTCCTTGGCTGAATTACAGTTACACAGTTTGGCGCTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CAA 90 bp ACAGCCTTTAAGATGCGGCTAGGTGCCCTGTGCCGGGGTAAGATAAGAATGAATTTTCCTTTTCTAGGTTaGATTTTGGAGAGCTGGTTT +
Preference number: 5 (lower is better)
Translates to: TAFKMRLGALCRGKIRMNFPFLG*ILESWF
Trigger: AAACCAGCTCTCCAAAATCAAACCTAGAAAAGGAAA...ATTCATTCTTATCTTACCCCGGCACAGGGCACCTAGCCGCATCTTAAAGGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CAA 90 bp CACAGCGCTATACCATCCCATGTACTTGCGTTGAAAAGAACACGTCTCTCTCCACATGCTTACCGTCTATaGAAGATGTACAATGACTTG +
Preference number: 5 (lower is better)
Translates to: HSAIPSHVLALKRTRLSPHAYRL*KMYNDL
Trigger: CAAGTCATTGTACATCTTCAATAGACGGTAAGCATG...TGGAGAGAGACGTGTTCTTTTCAACGCAAGTACATGGGATGGTATAGCGCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CAA 90 bp ACTGTAGAATTCTGTAATCCAGAGCCTACGATTCAGATACAGGCTCTTAACAAGAAGCAAACCCGCCTTTaGGTAAACGGTGTCTGGCAT +
Preference number: 5 (lower is better)
Translates to: TVEFCNPEPTIQIQALNKKQTRL*VNGVWH
Trigger: ATGCCAGACACCGTTTACCAAAAGGCGGGTTTGCTT...CTTGTTAAGAGCCTGTATCTGAATCGTAGGCTCTGGATTACAGAATTCTACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CAA 90 bp CGGTGTCTGGCATTCCAGCAGAATCTTGGTTTGCATCCTTACCAGGAAGCAAAACCAACTCACCAGCAATaGCCATTAATCTACTTACTA +
Preference number: 5 (lower is better)
Translates to: RCLAFQQNLGLHPYQEAKPTHQQ*PLIYLL
Trigger: TAGTAAGTAGATTAATGGCAATTGCTGGTGAGTTGG...TTTTGCTTCCTGGTAAGGATGCAAACCAAGATTCTGCTGGAATGCCAGACACCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CAA 90 bp CCCTCCTTCCCTCTTTCTCTTTCTTCCTTCCGTCTTCTTCCATTAAATATTAATGGCTTGGCCACAACTTaGCTTCAAAATCAGAGTGGG +
Preference number: 5 (lower is better)
Translates to: PSFPLSLSSFRLLPLNINGLATT*LQNQSG
Trigger: CCCACTCTGATTTTGAAGCAAAGTTGTGGCCAAGCC...ATTAATATTTAATGGAAGAAGACGGAAGGAAGAAAGAGAAAGAGGGAAGGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS-3UTR CAA 90 bp ACCAAGTTGGACATTACGCATGGAAGAAAAGCAAACCCGCCTTTTGGTAAACGGTTTCTAGGTTTGATTTaGGAGAGCTGGTTTCTTTGG +
Preference number: 5 (lower is better)
Translates to: TKLDITHGRKANPPFGKRFLGLI*ESWFLW
Trigger: CCAAAGAAACCAGCTCTCCAAAATCAAACCTAGAAA...CCGTTTACCAAAAGGCGGGTTTGCTTTTCTTCCATGCGTAATGTCCAACTTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CAA 90 bp GTGTCTGGCATTCCAGCAGAATCTTGGTTTGCATCCTTACCAGGAAGCAAAACTCATGCTTACCGTCTATaGAAGATGTACAATGACTTG +
Preference number: 5 (lower is better)
Translates to: VSGIPAESWFASLPGSKTHAYRL*KMYNDL
Trigger: CAAGTCATTGTACATCTTCAATAGACGGTAAGCATG...AGTTTTGCTTCCTGGTAAGGATGCAAACCAAGATTCTGCTGGAATGCCAGACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CAA 90 bp CACAAGGCGCGCATTGAGGTCTATTCGAGCGCAGTGCTGGTTAATATACATAATATAGAAAGAACCAAGTaGGACATTACGCATGGAAGA +
Preference number: 5 (lower is better)
Translates to: HKARIEVYSSAVLVNIHNIERTK*DITHGR
Trigger: TCTTCCATGCGTAATGTCCAACTTGGTTCTTTCTAT...ATTATGTATATTAACCAGCACTGCGCTCGAATAGACCTCAATGCGCGCCTTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CAA 90 bp CAGATACAGGCTCTTAACAAGGCCTTACTTGTAGTTAGGGGAATAGAAAGAACCTCCCATGTACTTGCGTaGAAAAGAACACGTCTCTCT +
Preference number: 5 (lower is better)
Translates to: QIQALNKALLVVRGIERTSHVLA*KRTRLS
Trigger: AGAGAGACGTGTTCTTTTCAACGCAAGTACATGGGA...GGTTCTTTCTATTCCCCTAACTACAAGTAAGGCCTTGTTAAGAGCCTGTATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CAA 90 bp CAGATACAGGCTCTTAACAAGGCCTTACTTGTAGTTAGGGGAATAGAAAGAACCCTGTTTCTTGTAGGGTaGATTGGTTGGTGGAAATGG +
Preference number: 5 (lower is better)
Translates to: QIQALNKALLVVRGIERTLFLVG*IGWWKW
Trigger: CCATTTCCACCAACCAATCAACCCTACAAGAAACAG...GGTTCTTTCTATTCCCCTAACTACAAGTAAGGCCTTGTTAAGAGCCTGTATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CAA 90 bp ATAACTGTAGAATTCTGTAATCCAGAGCCTACGATTCAGATACAGGCTCTTAACCATTCCAGCAGAATCTaGGTTTGCATCCTTACCAGG +
Preference number: 5 (lower is better)
Translates to: ITVEFCNPEPTIQIQALNHSSRI*VCILTR
Trigger: CCTGGTAAGGATGCAAACCAAGATTCTGCTGGAATG...GTTAAGAGCCTGTATCTGAATCGTAGGCTCTGGATTACAGAATTCTACAGTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CAA 90 bp TCCCATGTACTTGCGTTGAAAAGAACACGTCTCTCTCCAATTAAATCTTGTTCCCTGATGGGAGGAAATTaGAAAGAAGCGCCAAACTGT +
Preference number: 5 (lower is better)
Translates to: SHVLALKRTRLSPIKSCSLMGGN*KEAPNC
Trigger: ACAGTTTGGCGCTTCTTTCAAATTTCCTCCCATCAG...GGAACAAGATTTAATTGGAGAGAGACGTGTTCTTTTCAACGCAAGTACATGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CAA 90 bp CGCATTGAGGTCTATTCGAGCGCAGTGCTGGTTAATATACATAATCTGGAGAGAGTGCCATTTGAAACTTaGCTTTGGTACCCAGATAAA +
Preference number: 5 (lower is better)
Translates to: RIEVYSSAVLVNIHNLERVPFET*LWYPDK
Trigger: TTTATCTGGGTACCAAAGCAAAGTTTCAAATGGCAC...TCTCTCCAGATTATGTATATTAACCAGCACTGCGCTCGAATAGACCTCAATGCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CAA 90 bp GGTGAAACTCTGCTGGAAACCAACTCACCAGCAATTGCCATTAATCTACTTACTCCTTTATTGTGCCATTaGAAACTTTGCTTTGGTACC +
Preference number: 5 (lower is better)
Translates to: GETLLETNSPAIAINLLTPLLCH*KLCFGT
Trigger: GGTACCAAAGCAAAGTTTCAAATGGCACAATAAAGG...AGTAAGTAGATTAATGGCAATTGCTGGTGAGTTGGTTTCCAGCAGAGTTTCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CAA 90 bp TTGGTTTGCATCCTTACCAGGAAGCAAAACTCCAAAGAGTTTCCCTACTTACTACCAACTCACCAGCAATaGCCATTAATCTACTTACTA +
Preference number: 5 (lower is better)
Translates to: LVCILTRKQNSKEFPYLLPTHQQ*PLIYLL
Trigger: TAGTAAGTAGATTAATGGCAATTGCTGGTGAGTTGG...TAGTAAGTAGGGAAACTCTTTGGAGTTTTGCTTCCTGGTAAGGATGCAAACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CAA 90 bp AATAGAAAGAACCAAGTTGGACATTACGCATGGAAGAAAAGCAAACCCGCCTTTGTGCCATTTGAAACTTaGCTTTGGTACCCAGATAAA +
Preference number: 5 (lower is better)
Translates to: NRKNQVGHYAWKKSKPAFVPFET*LWYPDK
Trigger: TTTATCTGGGTACCAAAGCAAAGTTTCAAATGGCAC...AAAGGCGGGTTTGCTTTTCTTCCATGCGTAATGTCCAACTTGGTTCTTTCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CAA 90 bp TCCCATGTACTTGCGTTGAAAAGAACACGTCTCTCTCCAATTAAATCTTGTTCCCCTTTATTGTGCCATTaGAAACTTTGCTTTGGTACC +
Preference number: 5 (lower is better)
Translates to: SHVLALKRTRLSPIKSCSPLLCH*KLCFGT
Trigger: GGTACCAAAGCAAAGTTTCAAATGGCACAATAAAGG...GGAACAAGATTTAATTGGAGAGAGACGTGTTCTTTTCAACGCAAGTACATGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CAA 90 bp TATTCAATAGACTTTTATTCCTCCTGGGTCCCAGCATCTGTTAGCCTTTCCAAATCAGTCATTCCATTTTaGCTCCCATCAGTAGTTTGT +
Preference number: 5 (lower is better)
Translates to: YSIDFYSSWVPASVSLSKSVIPF*LPSVVC
Trigger: ACAAACTACTGATGGGAGCAAAAATGGAATGACTGA...TTTGGAAAGGCTAACAGATGCTGGGACCCAGGAGGAATAAAAGTCTATTGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649478.1
CDS-3UTR CAA 90 bp CTTCCAAGGAATTTCTGTCCAGGACGATGGCACAGAGAATACAAATTTTATTTCATAGAAAGAACCAAGTaGGACATTACGCATGGAAGA +
Preference number: 5 (lower is better)
Translates to: LPRNFCPGRWHREYKFYFIERTK*DITHGR
Trigger: TCTTCCATGCGTAATGTCCAACTTGGTTCTTTCTAT...GAAATAAAATTTGTATTCTCTGTGCCATCGTCCTGGACAGAAATTCCTTGGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS-3UTR CAA 90 bp TCCAAGGAATTTCTGTCCAGGACGATGGCACAGAGAATACAAATTTTATTTCATAAGAATGAATCTTGCTaGAGGAAATGTACGATCTCC +
Preference number: 5 (lower is better)
Translates to: SKEFLSRTMAQRIQILFHKNESC*RKCTIS
Trigger: GGAGATCGTACATTTCCTCAAGCAAGATTCATTCTT...ATGAAATAAAATTTGTATTCTCTGTGCCATCGTCCTGGACAGAAATTCCTTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS CAA 72 bp ATGTTAAGTCTCGTGGACCCGCGCATTTGCGGGGGCTaGAATTCCCGAGCTTCTCGCTTCCTACGCGCGCAG +
Preference number: 6 (lower is better)
Translates to: MLSLVDPRICGG*NSRASRFLRAQ
Trigger: CTGCGCGCGTAGGAAGCGAGAAGCTCGGGAATTCAAGCCCCCGCAAATGCGCGGGTCCACGAGACTTAACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323327.5
ENST00000376501.7
ENST00000636213.3
ENST00000649478.1
ENST00000673651.1
CDS CAA 90 bp TCATCTGAAATGTTAAGTCTCGTGGACCCGCGCATTTGCGGGGGCTaGAATTCCCGAGCTTCTCGCTTCCTACGCGCGCAGCAGACCCGC +
Preference number: 6 (lower is better)
Translates to: SSEMLSLVDPRICGG*NSRASRFLRAQQTR
Trigger: GCGGGTCTGCTGCGCGCGTAGGAAGCGAGAAGCTCGGGAATTCAAGCCCCCGCAAATGCGCGGGTCCACGAGACTTAACATTTCAGATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323327.5
ENST00000376501.7
ENST00000636213.3
ENST00000649478.1
ENST00000673651.1
CDS CCA 72 bp TCATGGTCGCAGAATGTGGCCTCAAAGCTGTGGTGCTaGGTGGAGACTTGGGCCATGGGGACAAAGAGGCTT +
Preference number: 6 (lower is better)
Translates to: SWSQNVASKLWC*VETWAMGTKRL
Trigger: AAGCCTCTTTGTCCCCATGGCCCAAGTCTCCACCCAGCACCACAGCTTTGAGGCCACATTCTGCGACCATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS TCA 72 bp CTTCTTTGGCATTTTAGCTTTCTGGGCCCCAGCAGATaGTACACTCATGGTCGCAGAATGTGGCCTCAAAGC +
Preference number: 6 (lower is better)
Translates to: LLWHFSFLGPSR*YTHGRRMWPQS
Trigger: GCTTTGAGGCCACATTCTGCGACCATGAGTGTATCATCTGCTGGGGCCCAGAAAGCTAAAATGCCAAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS CAA 72 bp CTTGCTACCTTCAGCACATCCAGAGTATCTCAATGTTaGGTTTCACAGTGGCTGGTACATTCCTTTGATAAC +
Preference number: 6 (lower is better)
Translates to: LATFSTSRVSQC*VSQWLVHSFDN
Trigger: GTTATCAAAGGAATGTACCAGCCACTGTGAAACCAAACATTGAGATACTCTGGATGTGCTGAAGGTAGCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS CCA 72 bp TTGCTACCTTCAGCACATCCAGAGTATCTCAATGTTTaGTTTCACAGTGGCTGGTACATTCCTTTGATAACA +
Preference number: 6 (lower is better)
Translates to: LLPSAHPEYLNV*FHSGWYIPLIT
Trigger: TGTTATCAAAGGAATGTACCAGCCACTGTGAAACCAAACATTGAGATACTCTGGATGTGCTGAAGGTAGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323327.5
ENST00000673651.1
CDS TCA 72 bp ACATCCACATGCTTACCGTCTATTGAAGATGTACAATaGCTTGAAGAGGATATAGCTGTCATGGTCGTTCTA +
Preference number: 6 (lower is better)
Translates to: TSTCLPSIEDVQ*LEEDIAVMVVL
Trigger: TAGAACGACCATGACAGCTATATCCTCTTCAAGTCATTGTACATCTTCAATAGACGGTAAGCATGTGGATGT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376501.7
ENST00000636213.3
CDS GCA 72 bp CTTGAAGAGGATATAGCTGTCATGGTCGTTCTAGACTaGACTAATAAGGGTTTTACTTTCATACCTGTTCCT +
Preference number: 6 (lower is better)
Translates to: LEEDIAVMVVLD*TNKGFTFIPVP
Trigger: AGGAACAGGTATGAAAGTAAAACCCTTATTAGTGCAGTCTAGAACGACCATGACAGCTATATCCTCTTCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376501.7
CDS CCA 72 bp ATGTCATTCTGTTCCAAGTTGGCTTCTTGGAAGCTCTaGCTTGGAAAGATTAGCTTTGTGTCTTTCAAACTA +
Preference number: 6 (lower is better)
Translates to: MSFCSKLASWKL*LGKISFVSFKL
Trigger: TAGTTTGAAAGACACAAAGCTAATCTTTCCAAGCCAGAGCTTCCAAGAAGCCAACTTGGAACAGAATGACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649478.1