Pregenerated sensors for BRIX1 (Homo sapiens)
Ensembl gene IDs: ENSG00000113460Ensembl transcript IDs: ENST00000336767.6, ENST00000510834.1, ENST00000510960.5, ENST00000515798.5
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GACAGATCAGGGGTTGGTTCTTCCATGGCTTCATTAACTGATGACTaGGTAAACTTCAGTGAGATGCCTTCCTTTCTACCAGTCTACTCC | + |
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Preference number: 1 (lower is better) Translates to: DRSGVGSSMASLTDD*VNFSEMPSFLPVYS Trigger: GGAGTAGACTGGTAGAAAGGAAGGCATCTCACTGAAGTTTACTCAGTCATCAGTTAATGAAGCCATGGAAGAACCAACCCCTGATCTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336767.6 |
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| 3UTR TCA 72 bp | GGGGTTGGTTCTTCCATGGCTTCATTAACTGATGACTaGGTAAACTTCAGTGAGATGCCTTCCTTTCTACCA | + |
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Preference number: 3 (lower is better) Translates to: GVGSSMASLTDD*VNFSEMPSFLP Trigger: TGGTAGAAAGGAAGGCATCTCACTGAAGTTTACTCAGTCATCAGTTAATGAAGCCATGGAAGAACCAACCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336767.6 |
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| CDS-3UTR CCA 90 bp | GTGAGATGCCTTCCTTTCTACCAGTCTACTCCTACTTTACCATCCACAACCGATGGCGTGCCGCTTAGCTaGCGGCTCCGCATCTATTTC | + |
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Preference number: 4 (lower is better) Translates to: VRCLPFYQSTPTLPSTTDGVPLS*RLRIYF Trigger: GAAATAGATGCGGAGCCGCCAGCTAAGCGGCACGCC...ATCGGTTGTGGATGGTAAAGTAGGAGTAGACTGGTAGAAAGGAAGGCATCTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000336767.6 |
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| CDS-3UTR GCA 90 bp | TCTACTCCTACTTTACCATCCACAACCGATGCTCTTGAAGTGTTGAATGCTTTTTGGTTGCCGCCATCTTaGCTCGCCGCCCGCGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: STPTLPSTTDALEVLNAFWLPPS*LAARAL Trigger: AAGAGCGCGGGCGGCGAGGCAAGATGGCGGCAACCA...AAAAGCATTCAACACTTCAAGAGCATCGGTTGTGGATGGTAAAGTAGGAGTAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000336767.6 |
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| CDS-3UTR GCA 90 bp | CAACCCAAGAGAACAGGCTACATTAAGTGTGCTACATTTTTAGCAACACAAACTTCCTCTGCTGTGGCGTaGCGCTTAGCTGGCGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: QPKRTGYIKCATFLATQTSSAVA*RLAGGS Trigger: GGAGCCGCCAGCTAAGCGGCACGCCACAGCAGAGGA...AGTTTGTGTTGCTAAAAATGTAGCACACTTAATGTAGCCTGTTCTCTTGGGTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000336767.6 |
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| CDS-3UTR GCA 90 bp | CTTCCTTTCTACCAGTCTACTCCTACTTTACCATCCACAACCGATGCTCTTGAATTTTCCACTTTCCCTTaGAAACGGGGCCTGGGATCC | + |
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Preference number: 4 (lower is better) Translates to: LPFYQSTPTLPSTTDALEFSTFP*KRGLGS Trigger: GGATCCCAGGCCCCGTTTGCAAGGGAAAGTGGAAAA...TTCAAGAGCATCGGTTGTGGATGGTAAAGTAGGAGTAGACTGGTAGAAAGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000336767.6 |
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| CDS-3UTR GCA 90 bp | AACCAAAAATTCCAACCCAAGAGAACAGGCTACATTAAGTGTGCTACATTTTTATTCCTCCACCTCCTCTaGTGTGGCGTGCCGCTTAGC | + |
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Preference number: 4 (lower is better) Translates to: NQKFQPKRTGYIKCATFLFLHLL*CGVPLS Trigger: GCTAAGCGGCACGCCACAGCAGAGGAGGTGGAGGAA...TAAAAATGTAGCACACTTAATGTAGCCTGTTCTCTTGGGTTGGAATTTTTGGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000336767.6 |
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| CDS-3UTR TCA 90 bp | ACTTCAGTGAGATGCCTTCCTTTCTACCAGTCTACTCCTACTTTACCATCCACACTGAGTAAACTTCAGTaGGATGCCTTCCTTTCTACC | + |
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Preference number: 4 (lower is better) Translates to: TSVRCLPFYQSTPTLPSTLSKLQ*DAFLST Trigger: GGTAGAAAGGAAGGCATCTCACTGAAGTTTACTCAG...TGTGGATGGTAAAGTAGGAGTAGACTGGTAGAAAGGAAGGCATCTCACTGAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000336767.6 |
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| CDS-3UTR CCA 90 bp | TCTACTCCTACTTTACCATCCACAACCGATGCTCTTGAAGTGTTGAATGCTTTTTGCAGTGGGATCATGTaGAAGAAGAGTCTTCGGCTC | + |
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Preference number: 4 (lower is better) Translates to: STPTLPSTTDALEVLNAFCSGIM*KKSLRL Trigger: GAGCCGAAGACTCTTCTTCCACATGATCCCACTGCA...AAAAGCATTCAACACTTCAAGAGCATCGGTTGTGGATGGTAAAGTAGGAGTAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000336767.6 |
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| CDS-3UTR TCA 90 bp | ACTTCAGTGAGATGCCTTCCTTTCTACCAGTCTACTCCTACTTTACCATCCACACACAACCGATGCTCTTaGAGTGTTGAATGCTTTTAC | + |
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Preference number: 4 (lower is better) Translates to: TSVRCLPFYQSTPTLPSTHNRCS*SVECFY Trigger: GTAAAAGCATTCAACACTTCAAGAGCATCGGTTGTG...TGTGGATGGTAAAGTAGGAGTAGACTGGTAGAAAGGAAGGCATCTCACTGAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336767.6 |
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| CDS-3UTR TCA 90 bp | GTGAGATGCCTTCCTTTCTACCAGTCTACTCCTACTTTACCATCCACAACCGATCTCTGGAAGAAAAGATaGGAATCCGTTCCTTATTTT | + |
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Preference number: 4 (lower is better) Translates to: VRCLPFYQSTPTLPSTTDLWKKR*ESVPYF Trigger: AAAATAAGGAACGGATTCTCATCTTTTCTTCCAGAG...ATCGGTTGTGGATGGTAAAGTAGGAGTAGACTGGTAGAAAGGAAGGCATCTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336767.6 |
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| CDS-3UTR GCA 90 bp | CTTCCTTTCTACCAGTCTACTCCTACTTTACCATCCACAACCGATGCTCTTGAATGTTACAAAAACATCTaGAGTGGGATCATGTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: LPFYQSTPTLPSTTDALECYKNI*SGIMWK Trigger: CTTCCACATGATCCCACTGCAGATGTTTTTGTAACA...TTCAAGAGCATCGGTTGTGGATGGTAAAGTAGGAGTAGACTGGTAGAAAGGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000336767.6 |
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| CDS-3UTR TCA 90 bp | TTCAGTGAGATGCCTTCCTTTCTACCAGTCTACTCCTACTTTACCATCCACAACTCTTCTTCTATGATCTaGAAGTTCCGAAACCATATC | + |
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Preference number: 4 (lower is better) Translates to: FSEMPSFLPVYSYFTIHNSSSMI*KFRNHI Trigger: GATATGGTTTCGGAACTTTCAGATCATAGAAGAAGA...GTTGTGGATGGTAAAGTAGGAGTAGACTGGTAGAAAGGAAGGCATCTCACTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000336767.6 |
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| CDS-3UTR TCA 90 bp | CCTACTTTACCATCCACAACCGATGCTCTTGAAGTGTTGAATGCTTTTACAAATCAGCATCTTCTTCTATaGTCTGAAAGTTCCGAAACC | + |
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Preference number: 4 (lower is better) Translates to: PTLPSTTDALEVLNAFTNQHLLL*SESSET Trigger: GGTTTCGGAACTTTCAGATCATAGAAGAAGATGCTG...ATTTGTAAAAGCATTCAACACTTCAAGAGCATCGGTTGTGGATGGTAAAGTAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336767.6 |
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| CDS-3UTR CCA 90 bp | CCTACTTTACCATCCACAACCGATGCTCTTGAAGTGTTGAATGCTTTTACAAATCAAAAACATCTGCAGTaGGATCATGTGGAAGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: PTLPSTTDALEVLNAFTNQKHLQ*DHVEEE Trigger: CTCTTCTTCCACATGATCCCACTGCAGATGTTTTTG...ATTTGTAAAAGCATTCAACACTTCAAGAGCATCGGTTGTGGATGGTAAAGTAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000336767.6 |
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| CDS-3UTR CCA 90 bp | CAAAAATTCCAACCCAAGAGAACAGGCTACATTAAGTGTGCTACATTTTTAGCATGGTTTCTCCTCAGCTaGTGTTACAAAAACATCTGC | + |
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Preference number: 4 (lower is better) Translates to: QKFQPKRTGYIKCATFLAWFLLS*CYKNIC Trigger: GCAGATGTTTTTGTAACACCAGCTGAGGAGAAACCA...TGCTAAAAATGTAGCACACTTAATGTAGCCTGTTCTCTTGGGTTGGAATTTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000336767.6 |
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| CDS-3UTR CCA 90 bp | CAAAAATTCCAACCCAAGAGAACAGGCTACATTAAGTGTGCTACATTTTTAGCACCACTGTATTTCTATTaGTTTCTCCTCAGCTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: QKFQPKRTGYIKCATFLAPLYFY*FLLSWC Trigger: ACACCAGCTGAGGAGAAACCAATAGAAATACAGTGG...TGCTAAAAATGTAGCACACTTAATGTAGCCTGTTCTCTTGGGTTGGAATTTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000336767.6 |
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| CDS-3UTR TCA 90 bp | ACTTTACCATCCACAACCGATGCTCTTGAAGTGTTGAATGCTTTTACAAATAATTCATTAACTGATGACTaGGTAAACTTCAGTGAGATG | + |
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Preference number: 4 (lower is better) Translates to: TLPSTTDALEVLNAFTNNSLTDD*VNFSEM Trigger: CATCTCACTGAAGTTTACTCAGTCATCAGTTAATGA...ATTATTTGTAAAAGCATTCAACACTTCAAGAGCATCGGTTGTGGATGGTAAAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336767.6 |
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| CDS-3UTR CAA 90 bp | CTTCCTTTCTACCAGTCTACTCCTACTTTACCATCCACAACCGATGCTCTTGAATTGGTTGCCGCCATCTaGCCTCGCCGCCCGCGCTCT | + |
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Preference number: 5 (lower is better) Translates to: LPFYQSTPTLPSTTDALELVAAI*PRRPRS Trigger: AGAGCGCGGGCGGCGAGGCAAGATGGCGGCAACCAA...TTCAAGAGCATCGGTTGTGGATGGTAAAGTAGGAGTAGACTGGTAGAAAGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000336767.6 |
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| CDS-3UTR CAA 90 bp | GTGAGATGCCTTCCTTTCTACCAGTCTACTCCTACTTTACCATCCACAACCGATTTTTTCCACTTTCCCTaGCAAACGGGGCCTGGGATC | + |
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Preference number: 5 (lower is better) Translates to: VRCLPFYQSTPTLPSTTDFFHFP*QTGPGI Trigger: GATCCCAGGCCCCGTTTGCAAGGGAAAGTGGAAAAA...ATCGGTTGTGGATGGTAAAGTAGGAGTAGACTGGTAGAAAGGAAGGCATCTCAC 49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000336767.6 |
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| CDS-3UTR CAA 90 bp | GTGAGATGCCTTCCTTTCTACCAGTCTACTCCTACTTTACCATCCACAACCGATGTGACAGATCAGGGGTaGGTTCTTCCATGGCTTCAT | + |
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Preference number: 5 (lower is better) Translates to: VRCLPFYQSTPTLPSTTDVTDQG*VLPWLH Trigger: ATGAAGCCATGGAAGAACCAACCCCTGATCTGTCAC...ATCGGTTGTGGATGGTAAAGTAGGAGTAGACTGGTAGAAAGGAAGGCATCTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336767.6 |
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| CDS-3UTR CAA 90 bp | ACTTCAGTGAGATGCCTTCCTTTCTACCAGTCTACTCCTACTTTACCATCCACAGTCCGTGAGGTGAATTaGAAAGCCACATATAGAGAT | + |
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Preference number: 5 (lower is better) Translates to: TSVRCLPFYQSTPTLPSTVREVN*KATYRD Trigger: ATCTCTATATGTGGCTTTCAAATTCACCTCACGGAC...TGTGGATGGTAAAGTAGGAGTAGACTGGTAGAAAGGAAGGCATCTCACTGAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000336767.6 |
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| CDS-3UTR CAA 90 bp | ACTTTACCATCCACAACCGATGCTCTTGAAGTGTTGAATGCTTTTACAAATAATCCCACTGTATTTCTATaGGTTTCTCCTCAGCTGGTG | + |
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Preference number: 5 (lower is better) Translates to: TLPSTTDALEVLNAFTNNPTVFL*VSPQLV Trigger: CACCAGCTGAGGAGAAACCAATAGAAATACAGTGGG...ATTATTTGTAAAAGCATTCAACACTTCAAGAGCATCGGTTGTGGATGGTAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336767.6 |
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| CDS CCA 72 bp | TTGGTTGCCGCCATCTTGCCTCGCCGCCCGCGCTCTTaGCCTCCTTTCCGGCGCTGCCGCTCGCTCCTATTT | + |
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Preference number: 6 (lower is better) Translates to: LVAAILPRRPRS*PPFRRCRSLLF Trigger: AAATAGGAGCGAGCGGCAGCGCCGGAAAGGAGGCCAAGAGCGCGGGCGGCGAGGCAAGATGGCGGCAACCAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510960.5 |
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| CDS TCA 72 bp | TGGCCAAAGGGTTCTGGTACATTGAAGACTACTGAATaGCACAACCGCTTACCATGTTTGGTGACTGGTAGT | + |
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Preference number: 6 (lower is better) Translates to: WPKGSGTLKTTE*HNRLPCLVTGS Trigger: ACTACCAGTCACCAAACATGGTAAGCGGTTGTGTCATTCAGTAGTCTTCAATGTACCAGAACCCTTTGGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515798.5 |
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| CDS GCA 72 bp | TATTGGTTTCTCCTCAGCTGGTGTTACAAAAACATCTaGAGTGGGATCATGTGGAAGAAGAGTCTTCGGCTC | + |
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Preference number: 6 (lower is better) Translates to: YWFLLSWCYKNI*SGIMWKKSLRL Trigger: GAGCCGAAGACTCTTCTTCCACATGATCCCACTGCAGATGTTTTTGTAACACCAGCTGAGGAGAAACCAATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000336767.6 ENST00000515798.5 |
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| CDS TCA 72 bp | ATTTTGGCCAAAGGGTTCTGGTACATTGAAGACTACTaGATGACACAACCGCTTACCATGTTTGGTGACTGG | + |
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Preference number: 6 (lower is better) Translates to: ILAKGFWYIEDY*MTQPLTMFGDW Trigger: CCAGTCACCAAACATGGTAAGCGGTTGTGTCATTCAGTAGTCTTCAATGTACCAGAACCCTTTGGCCAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515798.5 |
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| CDS CCA 72 bp | TTTTACCCACTGTATTTCTATTGGTTTCTCCTCAGCTaGTGTTACAAAAACATCTGCAGTGGGATCATGTGG | + |
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Preference number: 6 (lower is better) Translates to: FYPLYFYWFLLS*CYKNICSGIMW Trigger: CCACATGATCCCACTGCAGATGTTTTTGTAACACCAGCTGAGGAGAAACCAATAGAAATACAGTGGGTAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000336767.6 ENST00000515798.5 |
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| CDS TCA 72 bp | TCAGTTATGAACCATATATCCTTTCAGCCAGTGTCATaGAAAAAGGGAGTAATTTCCAAGTTTCTATGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SVMNHISFQPVS*KKGVISKFLCS Trigger: GCTGCATAGAAACTTGGAAATTACTCCCTTTTTTCATGACACTGGCTGAAAGGATATATGGTTCATAACTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000515798.5 |
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| CDS GCA 72 bp | ATGGTCTTTTACCATATTTCTCCTTCACTACGTCTCTaGTCAAATATTAAACACCATCCCTTTGAACAGGTT | + |
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Preference number: 6 (lower is better) Translates to: MVFYHISPSLRL*SNIKHHPFEQV Trigger: AACCTGTTCAAAGGGATGGTGTTTAATATTTGAGCAGAGACGTAGTGAAGGAGAAATATGGTAAAAGACCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510834.1 |
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