Pregenerated sensors for BRICD5 (Homo sapiens)
Ensembl gene IDs: ENSG00000182685Ensembl transcript IDs: ENST00000328540.7, ENST00000328540.8, ENST00000562360.5, ENST00000566018.1
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCAGGTGGAAGGGTTTATTAGTCCCTGCCAGCAGCTGTCCTCCCTaGTGCAGGTGGCCTGGCCAGCCCACTGGATTGGGGACGGGCCAG | + |
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Preference number: 1 (lower is better) Translates to: ARWKGLLVPASSCPP*CRWPGQPTGLGTGQ Trigger: CTGGCCCGTCCCCAATCCAGTGGGCTGGCCAGGCCACCTGCACCAGGGAGGACAGCTGCTGGCAGGGACTAATAAACCCTTCCACCTGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328540.7 |
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| 3UTR GCA 90 bp | AGGTGGAAGGGTTTATTAGTCCCTGCCAGCAGCTGTCCTCCCTGGTaGAGGTGGCCTGGCCAGCCCACTGGATTGGGGACGGGCCAGGCT | + |
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Preference number: 1 (lower is better) Translates to: RWKGLLVPASSCPPW*RWPGQPTGLGTGQA Trigger: AGCCTGGCCCGTCCCCAATCCAGTGGGCTGGCCAGGCCACCTGCACCAGGGAGGACAGCTGCTGGCAGGGACTAATAAACCCTTCCACCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328540.7 |
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| 3UTR CCA 72 bp | CTGTCCTCCCTGGTGCAGGTGGCCTGGCCAGCCCACTaGATTGGGGACGGGCCAGGCTGGGCCAGGTCGGGG | + |
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Preference number: 3 (lower is better) Translates to: LSSLVQVAWPAH*IGDGPGWARSG Trigger: CCCCGACCTGGCCCAGCCTGGCCCGTCCCCAATCCAGTGGGCTGGCCAGGCCACCTGCACCAGGGAGGACAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328540.7 |
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| 3UTR-3UTR CAA 90 bp | CAGGTGGAAGGGTTTATTAGTCCCTGCCAGCAGCTGTCCTCCCTGGTGCAGGTGGGCCAGCCCACTGGATaGGGGACGGGCCAGGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: QVEGFISPCQQLSSLVQVGQPTG*GTGQAG Trigger: CCCAGCCTGGCCCGTCCCCAATCCAGTGGGCTGGCC...CACCTGCACCAGGGAGGACAGCTGCTGGCAGGGACTAATAAACCCTTCCACCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328540.7 |
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| CDS CCA 90 bp | TGCCAGCAGCTGTCCTCCCTGGTGCAGGTGGCCTGGCCAGCCCACTaGATTGGGGACGGGCCAGGCTGGGCCAGGTCGGGGGCTCAGTCT | + |
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Preference number: 5 (lower is better) Translates to: CQQLSSLVQVAWPAH*IGDGPGWARSGAQS Trigger: AGACTGAGCCCCCGACCTGGCCCAGCCTGGCCCGTCCCCAATCCAGTGGGCTGGCCAGGCCACCTGCACCAGGGAGGACAGCTGCTGGCA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000328540.8 |
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| CDS CCA 90 bp | CCCACAGCGGTCCTGACTCACCCTCTGCTCGCCGGGCCCAGTAGATaGGGGTCCTCATGCACAGGCGCTGCACCAAAGCCCCCGCCTGGG | + |
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Preference number: 5 (lower is better) Translates to: PTAVLTHPLLAGPSR*GSSCTGAAPKPPPG Trigger: CCCAGGCGGGGGCTTTGGTGCAGCGCCTGTGCATGAGGACCCCCATCTACTGGGCCCGGCGAGCAGAGGGTGAGTCAGGACCGCTGTGGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000562360.5 |
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| CDS TCA 90 bp | CAGCCGCTCTGCCCGTCGAACAGCACCGCCCAGCTGTGGTTGCTCTaGGGTGGGGTCACTGTGATGGTCGCCGCGTTCCGGGCCACGTCC | + |
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Preference number: 5 (lower is better) Translates to: QPLCPSNSTAQLWLL*GGVTVMVAAFRATS Trigger: GGACGTGGCCCGGAACGCGGCGACCATCACAGTGACCCCACCTCAGAGCAACCACAGCTGGGCGGTGCTGTTCGACGGGCAGAGCGGCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328540.8 ENST00000562360.5 |
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| CDS TCA 90 bp | CTCACGCTCTGCCCGTCGAACAGCACCGCCCAGCTGTGGTTGCTCTaGGGTGGGGTCACTGTGATGGTCGCCGCGTTCCGGGCCACGTCC | + |
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Preference number: 5 (lower is better) Translates to: LTLCPSNSTAQLWLL*GGVTVMVAAFRATS Trigger: GGACGTGGCCCGGAACGCGGCGACCATCACAGTGACCCCACCTCAGAGCAACCACAGCTGGGCGGTGCTGTTCGACGGGCAGAGCGTGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566018.1 |
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| CDS CCA 90 bp | ACTGTGATGGTCGCCGCGTTCCGGGCCACGTCCACCAGGATGGTTTaGTTGGGCCGGGGCATGTGGGGGCTCGGGAGGGTCATTCGCAGC | + |
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Preference number: 5 (lower is better) Translates to: TVMVAAFRATSTRMV*LGRGMWGLGRVIRS Trigger: GCTGCGAATGACCCTCCCGAGCCCCCACATGCCCCGGCCCAACCAAACCATCCTGGTGGACGTGGCCCGGAACGCGGCGACCATCACAGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000328540.8 ENST00000562360.5 ENST00000566018.1 |
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| CDS CCA 90 bp | GCTCTGCCCGTCGAACAGCACCGCCCAGCTGTGGTTGCTCTGAGGTaGGGTCACTGTGATGGTCGCCGCGTTCCGGGCCACGTCCACCAG | + |
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Preference number: 5 (lower is better) Translates to: ALPVEQHRPAVVALR*GHCDGRRVPGHVHQ Trigger: CTGGTGGACGTGGCCCGGAACGCGGCGACCATCACAGTGACCCCACCTCAGAGCAACCACAGCTGGGCGGTGCTGTTCGACGGGCAGAGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000328540.8 ENST00000562360.5 ENST00000566018.1 |
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| CDS CCA 90 bp | TTCCGGGCCACGTCCACCAGGATGGTTTGGTTGGGCCGGGGCATGTaGGGGCTCGGGAGGGTCATTCGCAGCGTCTGCAGCCTTGGCTTG | + |
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Preference number: 5 (lower is better) Translates to: FRATSTRMVWLGRGM*GLGRVIRSVCSLGL Trigger: CAAGCCAAGGCTGCAGACGCTGCGAATGACCCTCCCGAGCCCCCACATGCCCCGGCCCAACCAAACCATCCTGGTGGACGTGGCCCGGAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000328540.8 ENST00000562360.5 ENST00000566018.1 |
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| CDS TCA 90 bp | CGAACAGCACCGCCCAGCTGTGGTTGCTCTGAGGTGGGGTCACTGTaGTGGTCGCCGCGTTCCGGGCCACGTCCACCAGGATGGTTTGGT | + |
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Preference number: 5 (lower is better) Translates to: RTAPPSCGCSEVGSL*WSPRSGPRPPGWFG Trigger: ACCAAACCATCCTGGTGGACGTGGCCCGGAACGCGGCGACCATCACAGTGACCCCACCTCAGAGCAACCACAGCTGGGCGGTGCTGTTCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000328540.8 ENST00000562360.5 ENST00000566018.1 |
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| CDS GCA 90 bp | TGCAGAGATAAATCAGCCGCTGTCTCCGGGGCCCTGTGGCGAGGGTaGCGTGAATCTCCAAGGGCTCCGCCCCCAGCTCCTCAAACCATC | + |
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Preference number: 5 (lower is better) Translates to: CRDKSAAVSGALWRG*RESPRAPPPAPQTI Trigger: GATGGTTTGAGGAGCTGGGGGCGGAGCCCTTGGAGATTCACGGCACCCTCGCCACAGGGCCCCGGAGACAGCGGCTGATTTATCTCTGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000562360.5 |
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| CDS CCA 90 bp | AGATGTCGATGCAGAGATAAATCAGCCGCTGTCTCCGGGGCCCTGTaGCGAGGGTGCCGTGAATCTCCAAGGGCTCCGCCCCCAGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: RCRCRDKSAAVSGAL*RGCRESPRAPPPAP Trigger: AGGAGCTGGGGGCGGAGCCCTTGGAGATTCACGGCACCCTCGCCACAGGGCCCCGGAGACAGCGGCTGATTTATCTCTGCATCGACATCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000562360.5 |
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| CDS GCA 90 bp | TGGGGCGCTCAGCACAGCAGCTTGCTGGTTCCATCCTGCAGCCCCTaGTCACAATGTGCCGATTGTCTGCGTCCCTTGTCTGCAGCCTTG | + |
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Preference number: 5 (lower is better) Translates to: WGAQHSSLLVPSCSP*SQCADCLRPLSAAL Trigger: CAAGGCTGCAGACAAGGGACGCAGACAATCGGCACATTGTGAGCAGGGGCTGCAGGATGGAACCAGCAAGCTGCTGTGCTGAGCGCCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566018.1 |
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| CDS GCA 90 bp | AAAAGCAGACCGACACGCAGATGTTGCTCGGGAAGCAGATGTCGATaGAGAGATAAATCAGCCGCTGTCTCCGGGGCCCTGTGGCGAGGG | + |
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Preference number: 5 (lower is better) Translates to: KSRPTRRCCSGSRCR*RDKSAAVSGALWRG Trigger: CCCTCGCCACAGGGCCCCGGAGACAGCGGCTGATTTATCTCTGCATCGACATCTGCTTCCCGAGCAACATCTGCGTGTCGGTCTGCTTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000562360.5 |
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| CDS GCA 90 bp | GGGCTCAGTCTGGGAGGTAATAAAAGCAGACCGACACGCAGATGTTaGTCGGGAAGCAGATGTCGATGCAGAGATAAATCAGCCGCTGTC | + |
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Preference number: 5 (lower is better) Translates to: GLSLGGNKSRPTRRC*SGSRCRCRDKSAAV Trigger: GACAGCGGCTGATTTATCTCTGCATCGACATCTGCTTCCCGAGCAACATCTGCGTGTCGGTCTGCTTTTATTACCTCCCAGACTGAGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328540.8 |
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| CDS GCA 72 bp | CCTCTGCTCGCCGGGCCCAGTAGATGGGGGTCCTCATaGACAGGCGCTGCACCAAAGCCCCCGCCTGGGCGG | + |
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Preference number: 6 (lower is better) Translates to: PLLAGPSRWGSS*TGAAPKPPPGR Trigger: CCGCCCAGGCGGGGGCTTTGGTGCAGCGCCTGTGCATGAGGACCCCCATCTACTGGGCCCGGCGAGCAGAGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000328540.8 ENST00000562360.5 |
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| CDS CCA 72 bp | GTCGCCGCGTTCCGGGCCACGTCCACCAGGATGGTTTaGTTGGGCCGGGGCATGTGGGGGCTCGGGAGGGTC | + |
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Preference number: 6 (lower is better) Translates to: VAAFRATSTRMV*LGRGMWGLGRV Trigger: GACCCTCCCGAGCCCCCACATGCCCCGGCCCAACCAAACCATCCTGGTGGACGTGGCCCGGAACGCGGCGAC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000328540.8 ENST00000562360.5 ENST00000566018.1 |
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| CDS CAA 72 bp | GGTCGCCGCGTTCCGGGCCACGTCCACCAGGATGGTTaGGTTGGGCCGGGGCATGTGGGGGCTCGGGAGGGT | + |
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Preference number: 6 (lower is better) Translates to: GRRVPGHVHQDG*VGPGHVGAREG Trigger: ACCCTCCCGAGCCCCCACATGCCCCGGCCCAACCAAACCATCCTGGTGGACGTGGCCCGGAACGCGGCGACC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000328540.8 ENST00000562360.5 ENST00000566018.1 |
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| CDS CAA 90 bp | AGCAGCTGTCCTCCCTGGTGCAGGTGGCCTGGCCAGCCCACTGGATaGGGGACGGGCCAGGCTGGGCCAGGTCGGGGGCTCAGTCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: SSCPPWCRWPGQPTG*GTGQAGPGRGLSLG Trigger: TCCCAGACTGAGCCCCCGACCTGGCCCAGCCTGGCCCGTCCCCAATCCAGTGGGCTGGCCAGGCCACCTGCACCAGGGAGGACAGCTGCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000328540.8 |
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| CDS CAA 90 bp | GTGATGGTCGCCGCGTTCCGGGCCACGTCCACCAGGATGGTTTGGTaGGGCCGGGGCATGTGGGGGCTCGGGAGGGTCATTCGCAGCGTC | + |
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Preference number: 6 (lower is better) Translates to: VMVAAFRATSTRMVW*GRGMWGLGRVIRSV Trigger: GACGCTGCGAATGACCCTCCCGAGCCCCCACATGCCCCGGCCCAACCAAACCATCCTGGTGGACGTGGCCCGGAACGCGGCGACCATCAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000328540.8 ENST00000562360.5 ENST00000566018.1 |
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| CDS TCA 72 bp | AGCCGCTGTCTCCGGGGCCCTGTGGCGAGGGTGCCGTaGATCTCCAAGGGCTCCGCCCCCAGCTCCTCAAAC | + |
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Preference number: 6 (lower is better) Translates to: SRCLRGPVARVP*ISKGSAPSSSN Trigger: GTTTGAGGAGCTGGGGGCGGAGCCCTTGGAGATTCACGGCACCCTCGCCACAGGGCCCCGGAGACAGCGGCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000562360.5 |
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| CDS CCA 72 bp | CCGCGTTCCGGGCCACGTCCACCAGGATGGTTTGGTTaGGCCGGGGCATGTGGGGGCTCGGGAGGGTCATTC | + |
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Preference number: 6 (lower is better) Translates to: PRSGPRPPGWFG*AGACGGSGGSF Trigger: GAATGACCCTCCCGAGCCCCCACATGCCCCGGCCCAACCAAACCATCCTGGTGGACGTGGCCCGGAACGCGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000328540.8 ENST00000562360.5 ENST00000566018.1 |
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| CDS CAA 90 bp | CACTGTGATGGTCGCCGCGTTCCGGGCCACGTCCACCAGGATGGTTaGGTTGGGCCGGGGCATGTGGGGGCTCGGGAGGGTCATTCGCAG | + |
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Preference number: 6 (lower is better) Translates to: HCDGRRVPGHVHQDG*VGPGHVGAREGHSQ Trigger: CTGCGAATGACCCTCCCGAGCCCCCACATGCCCCGGCCCAACCAAACCATCCTGGTGGACGTGGCCCGGAACGCGGCGACCATCACAGTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000328540.8 ENST00000562360.5 ENST00000566018.1 |
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| CDS TCA 72 bp | CCGCCCAGCTGTGGTTGCTCTGAGGTGGGGTCACTGTaGTGGTCGCCGCGTTCCGGGCCACGTCCACCAGGA | + |
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Preference number: 6 (lower is better) Translates to: PPSCGCSEVGSL*WSPRSGPRPPG Trigger: TCCTGGTGGACGTGGCCCGGAACGCGGCGACCATCACAGTGACCCCACCTCAGAGCAACCACAGCTGGGCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000328540.8 ENST00000562360.5 ENST00000566018.1 |
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| CDS GCA 72 bp | AAATCAGCCGCTGTCTCCGGGGCCCTGTGGCGAGGGTaGCGTGAATCTCCAAGGGCTCCGCCCCCAGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: KSAAVSGALWRG*RESPRAPPPAP Trigger: AGGAGCTGGGGGCGGAGCCCTTGGAGATTCACGGCACCCTCGCCACAGGGCCCCGGAGACAGCGGCTGATTT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000562360.5 |
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| CDS TCA 72 bp | TGCCCGTCGAACAGCACCGCCCAGCTGTGGTTGCTCTaGGGTGGGGTCACTGTGATGGTCGCCGCGTTCCGG | + |
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Preference number: 6 (lower is better) Translates to: CPSNSTAQLWLL*GGVTVMVAAFR Trigger: CCGGAACGCGGCGACCATCACAGTGACCCCACCTCAGAGCAACCACAGCTGGGCGGTGCTGTTCGACGGGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000328540.8 ENST00000562360.5 ENST00000566018.1 |
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| CDS CCA 72 bp | ACGTCCACCAGGATGGTTTGGTTGGGCCGGGGCATGTaGGGGCTCGGGAGGGTCATTCGCAGCGTCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: TSTRMVWLGRGM*GLGRVIRSVCS Trigger: GCTGCAGACGCTGCGAATGACCCTCCCGAGCCCCCACATGCCCCGGCCCAACCAAACCATCCTGGTGGACGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000328540.8 ENST00000562360.5 ENST00000566018.1 |
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| CDS CCA 72 bp | GTCGAACAGCACCGCCCAGCTGTGGTTGCTCTGAGGTaGGGTCACTGTGATGGTCGCCGCGTTCCGGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: VEQHRPAVVALR*GHCDGRRVPGH Trigger: GTGGCCCGGAACGCGGCGACCATCACAGTGACCCCACCTCAGAGCAACCACAGCTGGGCGGTGCTGTTCGAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000328540.8 ENST00000562360.5 ENST00000566018.1 |
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| CDS CCA 72 bp | GTCCTGACTCACCCTCTGCTCGCCGGGCCCAGTAGATaGGGGTCCTCATGCACAGGCGCTGCACCAAAGCCC | + |
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Preference number: 6 (lower is better) Translates to: VLTHPLLAGPSR*GSSCTGAAPKP Trigger: GGGCTTTGGTGCAGCGCCTGTGCATGAGGACCCCCATCTACTGGGCCCGGCGAGCAGAGGGTGAGTCAGGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562360.5 |
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| CDS CCA 72 bp | TGCAGAGATAAATCAGCCGCTGTCTCCGGGGCCCTGTaGCGAGGGTGCCGTGAATCTCCAAGGGCTCCGCCC | + |
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Preference number: 6 (lower is better) Translates to: CRDKSAAVSGAL*RGCRESPRAPP Trigger: GGGCGGAGCCCTTGGAGATTCACGGCACCCTCGCCACAGGGCCCCGGAGACAGCGGCTGATTTATCTCTGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562360.5 |
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| CDS CAA 72 bp | CAGGAGGGCTTGGTCTTCACCCCTGTAGGCCCAGGTTaGGGGCGCTCAGCACAGCAGCTTGCTGGTTCCATC | + |
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Preference number: 6 (lower is better) Translates to: QEGLVFTPVGPG*GRSAQQLAGSI Trigger: GATGGAACCAGCAAGCTGCTGTGCTGAGCGCCCCAAACCTGGGCCTACAGGGGTGAAGACCAAGCCCTCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000328540.8 ENST00000566018.1 |
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| CDS CAA 72 bp | GGTTCCATCCTGCAGCCCCTGCTCACAATGTGCCGATaGTCTGCGTCCCTTGTCTGCAGCCTTGGCCAGGGG | + |
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Preference number: 6 (lower is better) Translates to: GSILQPLLTMCR*SASLVCSLGQG Trigger: CCCCTGGCCAAGGCTGCAGACAAGGGACGCAGACAATCGGCACATTGTGAGCAGGGGCTGCAGGATGGAACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566018.1 |
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| CDS GCA 72 bp | CCGACACGCAGATGTTGCTCGGGAAGCAGATGTCGATaGAGAGATAAATCAGCCGCTGTCTCCGGGGCCCCT | + |
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Preference number: 6 (lower is better) Translates to: PTRRCCSGSRCR*RDKSAAVSGAP Trigger: AGGGGCCCCGGAGACAGCGGCTGATTTATCTCTGCATCGACATCTGCTTCCCGAGCAACATCTGCGTGTCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000328540.8 |
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| CDS GCA 72 bp | CCGACACGCAGATGTTGCTCGGGAAGCAGATGTCGATaGAGAGATAAATCAGCCGCTGTCTCCGGGGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: PTRRCCSGSRCR*RDKSAAVSGAL Trigger: CAGGGCCCCGGAGACAGCGGCTGATTTATCTCTGCATCGACATCTGCTTCCCGAGCAACATCTGCGTGTCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562360.5 |
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| CDS GCA 72 bp | CATCCTGCAGCCCCTGCTCACAATGTGCCGATTGTCTaGGTCCCTTGTCTGCAGCCTTGGCCAGGGGAAACT | + |
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Preference number: 6 (lower is better) Translates to: HPAAPAHNVPIV*VPCLQPWPGET Trigger: AGTTTCCCCTGGCCAAGGCTGCAGACAAGGGACGCAGACAATCGGCACATTGTGAGCAGGGGCTGCAGGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566018.1 |
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| CDS GCA 72 bp | CTTGCTGGTTCCATCCTGCAGCCCCTGCTCACAATGTaGCGATTGTCTGCGTCCCTTGTCTGCAGCCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: LAGSILQPLLTM*RLSASLVCSLG Trigger: GCCAAGGCTGCAGACAAGGGACGCAGACAATCGGCACATTGTGAGCAGGGGCTGCAGGATGGAACCAGCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566018.1 |
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| CDS GCA 72 bp | CTGGGAGGTAATAAAAGCAGACCGACACGCAGATGTTaGTCGGGAAGCAGATGTCGATGCAGAGATAAATCA | + |
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Preference number: 6 (lower is better) Translates to: LGGNKSRPTRRC*SGSRCRCRDKS Trigger: TGATTTATCTCTGCATCGACATCTGCTTCCCGAGCAACATCTGCGTGTCGGTCTGCTTTTATTACCTCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328540.8 ENST00000562360.5 |
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