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Pregenerated sensors for BMP10 (Homo sapiens)

Ensembl gene IDs: ENSG00000163217

Ensembl transcript IDs: ENST00000295379.2

Found 324 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCTGGCTTCCTGTCAATGCAGGAGTTGAAAGTGACACCGGTGTGCTaGCGGGGTTCCGGTGGGAGCTGGGAGAACTCCTCTACGGGCTGT +
Preference number: 1 (lower is better)
Translates to: SGFLSMQELKVTPVC*RGSGGSWENSSTGC
Trigger: ACAGCCCGTAGAGGAGTTCTCCCAGCTCCCACCGGAACCCCGGCAGCACACCGGTGTCACTTTCAACTCCTGCATTGACAGGAAGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR GCA 90 bp TATTCTGGCTTCCTGTCAATGCAGGAGTTGAAAGTGACACCGGTGTaGTGCCGGGGTTCCGGTGGGAGCTGGGAGAACTCCTCTACGGGC +
Preference number: 1 (lower is better)
Translates to: YSGFLSMQELKVTPV*CRGSGGSWENSSTG
Trigger: GCCCGTAGAGGAGTTCTCCCAGCTCCCACCGGAACCCCGGCAGCACACCGGTGTCACTTTCAACTCCTGCATTGACAGGAAGCCAGAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR GCA 90 bp ACTGGAGGCTGCCACCTGCCAGGAAAACCCACCGGACCCTTCCTGTaGAGAACACTTCCTCACCACTTTCAGTCCTGGCCAGTTGCAAAA +
Preference number: 1 (lower is better)
Translates to: TGGCHLPGKPTGPFL*RTLPHHFQSWPVAK
Trigger: TTTTGCAACTGGCCAGGACTGAAAGTGGTGAGGAAGTGTTCTGCACAGGAAGGGTCCGGTGGGTTTTCCTGGCAGGTGGCAGCCTCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR GCA 90 bp GATTCGGTGTGTCTGTGGTGTTCGCTGATTTCCAATGTCCATGAATaGTCAGTAGGCGGGCGCTGGCACATTGGCCGCCCCACCACTATC +
Preference number: 1 (lower is better)
Translates to: DSVCLWCSLISNVHE*SVGGRWHIGRPTTI
Trigger: GATAGTGGTGGGGCGGCCAATGTGCCAGCGCCCGCCTACTGAGCATTCATGGACATTGGAAATCAGCGAACACCACAGACACACCGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR CCA 90 bp AATGCAGGAGTTGAAAGTGACACCGGTGTGCTGCCGGGGTTCCGGTaGGAGCTGGGAGAACTCCTCTACGGGCTGTGTCTTTTCACTTTC +
Preference number: 1 (lower is better)
Translates to: NAGVESDTGVLPGFR*ELGELLYGLCLFTF
Trigger: GAAAGTGAAAAGACACAGCCCGTAGAGGAGTTCTCCCAGCTCCCACCGGAACCCCGGCAGCACACCGGTGTCACTTTCAACTCCTGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR CCA 90 bp GAGTTGAAAGTGACACCGGTGTGCTGCCGGGGTTCCGGTGGGAGCTaGGAGAACTCCTCTACGGGCTGTGTCTTTTCACTTTCTGACAAA +
Preference number: 1 (lower is better)
Translates to: ELKVTPVCCRGSGGS*ENSSTGCVFSLSDK
Trigger: TTTGTCAGAAAGTGAAAAGACACAGCCCGTAGAGGAGTTCTCCCAGCTCCCACCGGAACCCCGGCAGCACACCGGTGTCACTTTCAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR CCA 90 bp TGTTCGCTGATTTCCAATGTCCATGAATGCTCAGTAGGCGGGCGCTaGCACATTGGCCGCCCCACCACTATCAAGCCAGGTGCTCACAAA +
Preference number: 1 (lower is better)
Translates to: CSLISNVHECSVGGR*HIGRPTTIKPGAHK
Trigger: TTTGTGAGCACCTGGCTTGATAGTGGTGGGGCGGCCAATGTGCCAGCGCCCGCCTACTGAGCATTCATGGACATTGGAAATCAGCGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR GCA 90 bp TCTCCCTTTCTCCCCTTCAAGTACCCTCCCAACCCCTCTACTCTCTaGAGCAGCAATGGCCAGTACTCATGGCCTTGCTTTCCTATTGTC +
Preference number: 1 (lower is better)
Translates to: SPFLPFKYPPNPSTL*SSNGQYSWPCFPIV
Trigger: GACAATAGGAAAGCAAGGCCATGAGTACTGGCCATTGCTGCTGCAGAGAGTAGAGGGGTTGGGAGGGTACTTGAAGGGGAGAAAGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR GCA 90 bp ACTGCTCTGCTCTGCTCTGGTTCCTCCTGCACAAAGCCCAGAATATaGTTGCCAGGTAGAGGGAAATGGTTAGGGGTTAAGACTGGAGGC +
Preference number: 1 (lower is better)
Translates to: TALLCSGSSCTKPRI*LPGRGKWLGVKTGG
Trigger: GCCTCCAGTCTTAACCCCTAACCATTTCCCTCTACCTGGCAAGCATATTCTGGGCTTTGTGCAGGAGGAACCAGAGCAGAGCAGAGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR GCA 90 bp TTCCCTGCCTGGAGATGCTGGAACAGTTTGGAAACTGCTCTGCTCTaGTCTGGTTCCTCCTGCACAAAGCCCAGAATATGCTTGCCAGGT +
Preference number: 1 (lower is better)
Translates to: FPAWRCWNSLETALL*SGSSCTKPRICLPG
Trigger: ACCTGGCAAGCATATTCTGGGCTTTGTGCAGGAGGAACCAGAGCAGAGCAGAGCAGTTTCCAAACTGTTCCAGCATCTCCAGGCAGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR GCA 90 bp CCATGTTCCCTGCCTGGAGATGCTGGAACAGTTTGGAAACTGCTCTaGTCTGCTCTGGTTCCTCCTGCACAAAGCCCAGAATATGCTTGC +
Preference number: 1 (lower is better)
Translates to: PCSLPGDAGTVWKLL*SALVPPAQSPEYAC
Trigger: GCAAGCATATTCTGGGCTTTGTGCAGGAGGAACCAGAGCAGAGCAGAGCAGTTTCCAAACTGTTCCAGCATCTCCAGGCAGGGAACATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR GCA 90 bp ACCATCCATGTTCCCTGCCTGGAGATGCTGGAACAGTTTGGAAACTaGTCTGCTCTGCTCTGGTTCCTCCTGCACAAAGCCCAGAATATG +
Preference number: 1 (lower is better)
Translates to: TIHVPCLEMLEQFGN*SALLWFLLHKAQNM
Trigger: CATATTCTGGGCTTTGTGCAGGAGGAACCAGAGCAGAGCAGAGCAGTTTCCAAACTGTTCCAGCATCTCCAGGCAGGGAACATGGATGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR GCA 90 bp CTGGAAACCACATTCCTGGTTCTAACAGGAACCATCCATGTTCCCTaGCTGGAGATGCTGGAACAGTTTGGAAACTGCTCTGCTCTGCTC +
Preference number: 1 (lower is better)
Translates to: LETTFLVLTGTIHVP*LEMLEQFGNCSALL
Trigger: GAGCAGAGCAGAGCAGTTTCCAAACTGTTCCAGCATCTCCAGGCAGGGAACATGGATGGTTCCTGTTAGAACCAGGAATGTGGTTTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR CCA 90 bp TTTACCCCAGAACATGACCGTGCATCAGCTGATTCGGTGTGTCTGTaGTGTTCGCTGATTTCCAATGTCCATGAATGCTCAGTAGGCGGG +
Preference number: 1 (lower is better)
Translates to: FTPEHDRASADSVCL*CSLISNVHECSVGG
Trigger: CCCGCCTACTGAGCATTCATGGACATTGGAAATCAGCGAACACCACAGACACACCGAATCAGCTGATGCACGGTCATGTTCTGGGGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR GCA 90 bp TGCTGGAACAGTTTGGAAACTGCTCTGCTCTGCTCTGGTTCCTCCTaGACAAAGCCCAGAATATGCTTGCCAGGTAGAGGGAAATGGTTA +
Preference number: 1 (lower is better)
Translates to: CWNSLETALLCSGSS*TKPRICLPGRGKWL
Trigger: TAACCATTTCCCTCTACCTGGCAAGCATATTCTGGGCTTTGTGCAGGAGGAACCAGAGCAGAGCAGAGCAGTTTCCAAACTGTTCCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR CCA 90 bp ACCGGACCCTTCCTGTGCAGAACACTTCCTCACCACTTTCAGTCCTaGCCAGTTGCAAAATGGGAAGATGGTAAGATGAGAAGATGGGAA +
Preference number: 1 (lower is better)
Translates to: TGPFLCRTLPHHFQS*PVAKWEDGKMRRWE
Trigger: TTCCCATCTTCTCATCTTACCATCTTCCCATTTTGCAACTGGCCAGGACTGAAAGTGGTGAGGAAGTGTTCTGCACAGGAAGGGTCCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR GCA 90 bp GTTGACATCACCTTGGCAGCTCAAGATAGACCATGTAGGAGCGTTTaGAGCATTGAAATCCACAAATCAGGGCTTTTTCTCCCCCTGGAT +
Preference number: 1 (lower is better)
Translates to: VDITLAAQDRPCRSV*SIEIHKSGLFLPLD
Trigger: ATCCAGGGGGAGAAAAAGCCCTGATTTGTGGATTTCAATGCTGCAAACGCTCCTACATGGTCTATCTTGAGCTGCCAAGGTGATGTCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR TCA 90 bp CAGAGGAAAGCAGGGGTGCTGAGACAAGGGAACAGTGTTAACAGGTaGAGAAAGATATTAACATCCTTTCTTCCAACAGACAGACCCCTT +
Preference number: 1 (lower is better)
Translates to: QRKAGVLRQGNSVNR*RKILTSFLPTDRPL
Trigger: AAGGGGTCTGTCTGTTGGAAGAAAGGATGTTAATATCTTTCTTCACCTGTTAACACTGTTCCCTTGTCTCAGCACCCCTGCTTTCCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR TCA 90 bp ATCAATCACTGTATACCCACTGACGGTCAAAACACCACTCTTCCATaGGCAATGAATTCCCCAGGATTCACCCAGCAGACAACAGATCTA +
Preference number: 1 (lower is better)
Translates to: INHCIPTDGQNTTLP*AMNSPGFTQQTTDL
Trigger: TAGATCTGTTGTCTGCTGGGTGAATCCTGGGGAATTCATTGCTCATGGAAGAGTGGTGTTTTGACCGTCAGTGGGTATACAGTGATTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR GCA 90 bp GTCATACCAGCATTTCCTCTTGCACCATATGTGAGCTTGCAGAACTaGAAAGGGTTGAGAATGACCCACAGTGACTCTGAAAAGATCTAC +
Preference number: 1 (lower is better)
Translates to: VIPAFPLAPYVSLQN*KGLRMTHSDSEKIY
Trigger: GTAGATCTTTTCAGAGTCACTGTGGGTCATTCTCAACCCTTTGCAGTTCTGCAAGCTCACATATGGTGCAAGAGGAAATGCTGGTATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR TCA 90 bp TTACAAATGAATTTGACCAATCACATCTCTGAATTTCTGGGTCAGTaGCGGCAACAGGTGAATTCAGAGGGGAAGTACCAGATTTGGGGG +
Preference number: 1 (lower is better)
Translates to: LQMNLTNHISEFLGQ*RQQVNSEGKYQIWG
Trigger: CCCCCAAATCTGGTACTTCCCCTCTGAATTCACCTGTTGCCGTCACTGACCCAGAAATTCAGAGATGTGATTGGTCAAATTCATTTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR GCA 90 bp AGTGGGAAGCCTAGAAACTCTTACATGAATATTTTGGCTGTGGGCTaGCCAAGTCCCTCTGCTATAATTCTCCTCAAGAGTTGTTTAGCT +
Preference number: 1 (lower is better)
Translates to: SGKPRNSYMNILAVG*PSPSAIILLKSCLA
Trigger: AGCTAAACAACTCTTGAGGAGAATTATAGCAGAGGGACTTGGGCAGCCCACAGCCAAAATATTCATGTAAGAGTTTCTAGGCTTCCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR CCA 90 bp AGGATAAGAAGTACCTTGGAGTATGTGAGTATACATTGTGTACCATaGAGTATGAAGGATGCACCACGTTCCACTGAGGGTATTAAGCGT +
Preference number: 1 (lower is better)
Translates to: RIRSTLEYVSIHCVP*SMKDAPRSTEGIKR
Trigger: ACGCTTAATACCCTCAGTGGAACGTGGTGCATCCTTCATACTCCATGGTACACAATGTATACTCACATACTCCAAGGTACTTCTTATCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR TCA 90 bp AAGGGACTTAACTGGAGAGGAAAATATGCATTTCCTACAACAAACTaGCCTGTCCATTTCCTGAAGGCAGCAAGCCTCTATTACTGTACA +
Preference number: 1 (lower is better)
Translates to: KGLNWRGKYAFPTTN*PVHFLKAASLYYCT
Trigger: TGTACAGTAATAGAGGCTTGCTGCCTTCAGGAAATGGACAGGTCAGTTTGTTGTAGGAAATGCATATTTTCCTCTCCAGTTAAGTCCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR GCA 90 bp AAACTCTTACATGAATATTTTGGCTGTGGGCTGCCCAAGTCCCTCTaGTATAATTCTCCTCAAGAGTTGTTTAGCTATATCAACTTCGGT +
Preference number: 1 (lower is better)
Translates to: KLLHEYFGCGLPKSL*YNSPQELFSYINFG
Trigger: ACCGAAGTTGATATAGCTAAACAACTCTTGAGGAGAATTATAGCAGAGGGACTTGGGCAGCCCACAGCCAAAATATTCATGTAAGAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR CCA 90 bp GAAACATTAGTAAGATTCTACCTTTTTAAGGATCTGACAATATTCTaGCTTCCTGTCAATGCAGGAGTTGAAAGTGACACCGGTGTGCTG +
Preference number: 1 (lower is better)
Translates to: ETLVRFYLFKDLTIF*LPVNAGVESDTGVL
Trigger: CAGCACACCGGTGTCACTTTCAACTCCTGCATTGACAGGAAGCCAGAATATTGTCAGATCCTTAAAAAGGTAGAATCTTACTAATGTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR TCA 90 bp AAAGTAATTGGTCCAATTACAAATGAATTTGACCAATCACATCTCTaGATTTCTGGGTCAGTGACGGCAACAGGTGAATTCAGAGGGGAA +
Preference number: 1 (lower is better)
Translates to: KVIGPITNEFDQSHL*ISGSVTATGEFRGE
Trigger: TTCCCCTCTGAATTCACCTGTTGCCGTCACTGACCCAGAAATTCAGAGATGTGATTGGTCAAATTCATTTGTAATTGGACCAATTACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR GCA 90 bp AAAGGGCAACATCCCTTCTGTGTTCTAGGCAAGTTAAAAAGGTTTTaGCAGAACACTGCTAGGCTTCATAATCTGTTGATGAATCAAGTA +
Preference number: 1 (lower is better)
Translates to: KGQHPFCVLGKLKRF*QNTARLHNLLMNQV
Trigger: TACTTGATTCATCAACAGATTATGAAGCCTAGCAGTGTTCTGGCAAAACCTTTTTAACTTGCCTAGAACACAGAAGGGATGTTGCCCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR GCA 90 bp AGCGAGCTGAGGTTCAAATTGGGCCTTCTTCAAAATAGTTTTCCTTaGCTCTATTGTCTAGTGCAGTTTGAGTTTATAACCTTAAGAGAT +
Preference number: 1 (lower is better)
Translates to: SELRFKLGLLQNSFP*LYCLVQFEFITLRD
Trigger: ATCTCTTAAGGTTATAAACTCAAACTGCACTAGACAATAGAGGCAAGGAAAACTATTTTGAAGAAGGCCCAATTTGAACCTCAGCTCGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR TCA 90 bp ATGAGAAGATGGGAAAGTTACTGGGTTTCTACCATGAAACAATCATaGTTTCAAAATTCAGGCTTGGCTTTTGAGTCATTTGCTTGTGTG +
Preference number: 1 (lower is better)
Translates to: MRRWESYWVSTMKQS*FQNSGLAFESFACV
Trigger: CACACAAGCAAATGACTCAAAAGCCAAGCCTGAATTTTGAAATCATGATTGTTTCATGGTAGAAACCCAGTAACTTTCCCATCTTCTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR TCA 90 bp GATTTGGGGGATGAAAAGATTCATTTAAATAGCATCTCCGTTTACTaGGTAGCAATCACATTCTCTCACAGCCTGACAATATTTGCTTCT +
Preference number: 1 (lower is better)
Translates to: DLGDEKIHLNSISVY*VAITFSHSLTIFAS
Trigger: AGAAGCAAATATTGTCAGGCTGTGAGAGAATGTGATTGCTACTCAGTAAACGGAGATGCTATTTAAATGAATCTTTTCATCCCCCAAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR GCA 90 bp TACAAATCAGAAAATATACTACAAAGCATGCTTGTAGGCACAGCATaGCTGCAAGACACAAATATACAAAATTATGGCAAGCTATGGCAA +
Preference number: 1 (lower is better)
Translates to: YKSENILQSMLVGTA*LQDTNIQNYGKLWQ
Trigger: TTGCCATAGCTTGCCATAATTTTGTATATTTGTGTCTTGCAGGCATGCTGTGCCTACAAGCATGCTTTGTAGTATATTTTCTGATTTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR-3UTR TCA 90 bp TTTCTCCAGAAGCCCGGAGCCAGCAGCGCACACAGTGGAAAGCAGGGCTGGCACGGGATGGGAGGAAGGTaGGAGGCACTAGGGCCAAGA +
Preference number: 2 (lower is better)
Translates to: FLQKPGASSAHSGKQGWHGMGGR*EALGPR
Trigger: TCTTGGCCCTAGTGCCTCTCACCTTCCTCCCATCCC...GTGCCAGCCCTGCTTTCCACTGTGTGCGCTGCTGGCTCCGGGCTTCTGGAGAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR-3UTR TCA 90 bp CCCGGAGCCAGCAGCGCACACAGTGGAAAGCAGGGCTGGCACATCCTTAACATTGGAAAGCAGGGGTGCTaGGACAAGGGAACAGTGTTA +
Preference number: 2 (lower is better)
Translates to: PGASSAHSGKQGWHILNIGKQGC*DKGTVL
Trigger: TAACACTGTTCCCTTGTCTCAGCACCCCTGCTTTCC...AATGTTAAGGATGTGCCAGCCCTGCTTTCCACTGTGTGCGCTGCTGGCTCCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR-3UTR TCA 90 bp GGGCGCTGGCACATTGGCCGCCCCACCACTATCAAGCCAGGTGCTCACAAAACCTCACTGTATACCCACTaGCGGTCAAAACACCACTCT +
Preference number: 2 (lower is better)
Translates to: GRWHIGRPTTIKPGAHKTSLYTH*RSKHHS
Trigger: AGAGTGGTGTTTTGACCGTCAGTGGGTATACAGTGA...GGTTTTGTGAGCACCTGGCTTGATAGTGGTGGGGCGGCCAATGTGCCAGCGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR-3UTR TCA 90 bp GGGCGCTGGCACATTGGCCGCCCCACCACTATCAAGCCAGGTGCTCACAAAACCGAGCGTTTGCAGCATTaGAATCCACAAATCAGGGCT +
Preference number: 2 (lower is better)
Translates to: GRWHIGRPTTIKPGAHKTERLQH*NPQIRA
Trigger: AGCCCTGATTTGTGGATTTCAATGCTGCAAACGCTC...GGTTTTGTGAGCACCTGGCTTGATAGTGGTGGGGCGGCCAATGTGCCAGCGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR-3UTR GCA 90 bp CCCGGAGCCAGCAGCGCACACAGTGGAAAGCAGGGCTGGCACATCCTTAACATTAACCCCTCTACTCTCTaGAGCAGCAATGGCCAGTAC +
Preference number: 2 (lower is better)
Translates to: PGASSAHSGKQGWHILNINPSTL*SSNGQY
Trigger: GTACTGGCCATTGCTGCTGCAGAGAGTAGAGGGGTT...AATGTTAAGGATGTGCCAGCCCTGCTTTCCACTGTGTGCGCTGCTGGCTCCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR-3UTR TCA 90 bp TTTCTCCAGAAGCCCGGAGCCAGCAGCGCACACAGTGGAAAGCAGGGCTGGCACTTCAGGCTTGGCTTTTaGGTCATTTGCTTGTGTGTC +
Preference number: 2 (lower is better)
Translates to: FLQKPGASSAHSGKQGWHFRLGF*VICLCV
Trigger: GACACACAAGCAAATGACTCAAAAGCCAAGCCTGAA...GTGCCAGCCCTGCTTTCCACTGTGTGCGCTGCTGGCTCCGGGCTTCTGGAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR CAA 90 bp GCTCTGCTCTGCTCTGGTTCCTCCTGCACAAAGCCCAGAATATGCTaGCCAGGTAGAGGGAAATGGTTAGGGGTTAAGACTGGAGGCTGC +
Preference number: 2 (lower is better)
Translates to: ALLCSGSSCTKPRIC*PGRGKWLGVKTGGC
Trigger: GCAGCCTCCAGTCTTAACCCCTAACCATTTCCCTCTACCTGGCAAGCATATTCTGGGCTTTGTGCAGGAGGAACCAGAGCAGAGCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR-3UTR GCA 90 bp AATAGTGGGAAGCCTAGAAACTCTTACATGAATATTTTGGCTGTGGGCTGCCCAGTGACACCGGTGTGCTaGCGGGGTTCCGGTGGGAGC +
Preference number: 2 (lower is better)
Translates to: NSGKPRNSYMNILAVGCPVTPVC*RGSGGS
Trigger: GCTCCCACCGGAACCCCGGCAGCACACCGGTGTCAC...TGGGCAGCCCACAGCCAAAATATTCATGTAAGAGTTTCTAGGCTTCCCACTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR-3UTR CCA 90 bp GGGCGCTGGCACATTGGCCGCCCCACCACTATCAAGCCAGGTGCTCACAAAACCGGGAAGTACCAGATTTaGGGGATGAAAAGATTCATT +
Preference number: 2 (lower is better)
Translates to: GRWHIGRPTTIKPGAHKTGKYQI*GMKRFI
Trigger: AATGAATCTTTTCATCCCCCAAATCTGGTACTTCCC...GGTTTTGTGAGCACCTGGCTTGATAGTGGTGGGGCGGCCAATGTGCCAGCGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR-3UTR GCA 90 bp GCCAGGAAAACCCACCGGACCCTTCCTGTGCAGAACACTTCCTCACCACTTTCATTCCAGTTCACAGCATaGATCATGAAGGCCAGGGAA +
Preference number: 2 (lower is better)
Translates to: ARKTHRTLPVQNTSSPLSFQFTA*IMKARE
Trigger: TTCCCTGGCCTTCATGATGCATGCTGTGAACTGGAA...TGAAAGTGGTGAGGAAGTGTTCTGCACAGGAAGGGTCCGGTGGGTTTTCCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR-3UTR GCA 90 bp GGGCGCTGGCACATTGGCCGCCCCACCACTATCAAGCCAGGTGCTCACAAAACCATAGTGATTCTGAGTTaGATGGCTTTCTCAAAGCAT +
Preference number: 2 (lower is better)
Translates to: GRWHIGRPTTIKPGAHKTIVILS*MAFSKH
Trigger: ATGCTTTGAGAAAGCCATGCAACTCAGAATCACTAT...GGTTTTGTGAGCACCTGGCTTGATAGTGGTGGGGCGGCCAATGTGCCAGCGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR-3UTR CCA 90 bp GGGCGCTGGCACATTGGCCGCCCCACCACTATCAAGCCAGGTGCTCACAAAACCTTCAAAATTCAGGCTTaGCTTTTGAGTCATTTGCTT +
Preference number: 2 (lower is better)
Translates to: GRWHIGRPTTIKPGAHKTFKIQA*LLSHLL
Trigger: AAGCAAATGACTCAAAAGCCAAGCCTGAATTTTGAA...GGTTTTGTGAGCACCTGGCTTGATAGTGGTGGGGCGGCCAATGTGCCAGCGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR-3UTR CCA 90 bp CCCGGAGCCAGCAGCGCACACAGTGGAAAGCAGGGCTGGCACATCCTTAACATTATACATTGTGTACCATaGAGTATGAAGGATGCACCA +
Preference number: 2 (lower is better)
Translates to: PGASSAHSGKQGWHILNIIHCVP*SMKDAP
Trigger: TGGTGCATCCTTCATACTCCATGGTACACAATGTAT...AATGTTAAGGATGTGCCAGCCCTGCTTTCCACTGTGTGCGCTGCTGGCTCCGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR-3UTR GCA 90 bp CCCGGAGCCAGCAGCGCACACAGTGGAAAGCAGGGCTGGCACATCCTTAACATTCAAAATAGTTTTCCTTaGCTCTATTGTCTAGTGCAG +
Preference number: 2 (lower is better)
Translates to: PGASSAHSGKQGWHILNIQNSFP*LYCLVQ
Trigger: CTGCACTAGACAATAGAGGCAAGGAAAACTATTTTG...AATGTTAAGGATGTGCCAGCCCTGCTTTCCACTGTGTGCGCTGCTGGCTCCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR-3UTR CCA 90 bp GCTCTGGTTCCTCCTGCACAAAGCCCAGAATATGCTTGCCAGGTAGAGGGAAATGGCATTGCCAGGAAATaGCAAGTCCAAAGAGAAAAC +
Preference number: 2 (lower is better)
Translates to: ALVPPAQSPEYACQVEGNGIARK*QVQREN
Trigger: GTTTTCTCTTTGGACTTGCCATTTCCTGGCAATGCC...ATTTCCCTCTACCTGGCAAGCATATTCTGGGCTTTGTGCAGGAGGAACCAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR-3UTR CCA 90 bp CCTAGAAACTCTTACATGAATATTTTGGCTGTGGGCTGCCCAAGTCCCTCTGCTCCCTCTGGAGCACATTaGTCCTCCATGGGTTCATTT +
Preference number: 2 (lower is better)
Translates to: PRNSYMNILAVGCPSPSAPSGAH*SSMGSF
Trigger: AAATGAACCCATGGAGGACCAATGTGCTCCAGAGGG...AGCAGAGGGACTTGGGCAGCCCACAGCCAAAATATTCATGTAAGAGTTTCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR-3UTR GCA 90 bp CCTAGAAACTCTTACATGAATATTTTGGCTGTGGGCTGCCCAAGTCCCTCTGCTTTTCTTCTGTTTTCCTaGCTTGACCAGGAGTTGCCC +
Preference number: 2 (lower is better)
Translates to: PRNSYMNILAVGCPSPSAFLLFS*LDQELP
Trigger: GGGCAACTCCTGGTCAAGGCAGGAAAACAGAAGAAA...AGCAGAGGGACTTGGGCAGCCCACAGCCAAAATATTCATGTAAGAGTTTCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR-3UTR GCA 90 bp TTCCTGTGCAGAACACTTCCTCACCACTTTCAGTCCTGGCCAGTTGCAAAATGGCAGTACTCATGGCCTTaGTTTCCTATTGTCTCAGGA +
Preference number: 2 (lower is better)
Translates to: FLCRTLPHHFQSWPVAKWQYSWP*FPIVSG
Trigger: TCCTGAGACAATAGGAAAGCAAGGCCATGAGTACTG...CCATTTTGCAACTGGCCAGGACTGAAAGTGGTGAGGAAGTGTTCTGCACAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR-3UTR CCA 90 bp GAAAACCCACCGGACCCTTCCTGTGCAGAACACTTCCTCACCACTTTCAGTCCTGGTAAGATGAGAAGATaGGAAAGTTACTGGGTTTCT +
Preference number: 2 (lower is better)
Translates to: ENPPDPSCAEHFLTTFSPGKMRR*ESYWVS
Trigger: AGAAACCCAGTAACTTTCCCATCTTCTCATCTTACC...AGGACTGAAAGTGGTGAGGAAGTGTTCTGCACAGGAAGGGTCCGGTGGGTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR-3UTR CCA 90 bp CCTAGAAACTCTTACATGAATATTTTGGCTGTGGGCTGCCCAAGTCCCTCTGCTCACCACTTTCAGTCCTaGCCAGTTGCAAAATGGGAA +
Preference number: 2 (lower is better)
Translates to: PRNSYMNILAVGCPSPSAHHFQS*PVAKWE
Trigger: TTCCCATTTTGCAACTGGCCAGGACTGAAAGTGGTG...AGCAGAGGGACTTGGGCAGCCCACAGCCAAAATATTCATGTAAGAGTTTCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR CAA 90 bp TCCATTTGGTTTCTGTATCAATTAACCCTTCCCTTCAAGCATCCTTaGCCAGGCCCCTCCTCTCTGAGCAACTACAGAAACTCAACTGAC +
Preference number: 2 (lower is better)
Translates to: SIWFLYQLTLPFKHP*PGPSSLSNYRNSTD
Trigger: GTCAGTTGAGTTTCTGTAGTTGCTCAGAGAGGAGGGGCCTGGCAAAGGATGCTTGAAGGGAAGGGTTAATTGATACAGAAACCAAATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR CAA 90 bp ATGCACAGAGTCATACCAGCATTTCCTCTTGCACCATATGTGAGCTaGCAGAACTGCAAAGGGTTGAGAATGACCCACAGTGACTCTGAA +
Preference number: 2 (lower is better)
Translates to: MHRVIPAFPLAPYVS*QNCKGLRMTHSDSE
Trigger: TTCAGAGTCACTGTGGGTCATTCTCAACCCTTTGCAGTTCTGCAAGCTCACATATGGTGCAAGAGGAAATGCTGGTATGACTCTGTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR-3UTR GCA 90 bp GCTCTGGTTCCTCCTGCACAAAGCCCAGAATATGCTTGCCAGGTAGAGGGAAATCAGGAACAGATTTCATaGTGGTTTCTTCTGTTTTCC +
Preference number: 2 (lower is better)
Translates to: ALVPPAQSPEYACQVEGNQEQIS*WFLLFS
Trigger: GGAAAACAGAAGAAACCAGCATGAAATCTGTTCCTG...ATTTCCCTCTACCTGGCAAGCATATTCTGGGCTTTGTGCAGGAGGAACCAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR-3UTR GCA 90 bp AATAGTGGGAAGCCTAGAAACTCTTACATGAATATTTTGGCTGTGGGCTGCCCATGCTCTGGTTCCTCCTaGACAAAGCCCAGAATATGC +
Preference number: 2 (lower is better)
Translates to: NSGKPRNSYMNILAVGCPCSGSS*TKPRIC
Trigger: GCATATTCTGGGCTTTGTGCAGGAGGAACCAGAGCA...TGGGCAGCCCACAGCCAAAATATTCATGTAAGAGTTTCTAGGCTTCCCACTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR-3UTR TCA 90 bp AATAGTGGGAAGCCTAGAAACTCTTACATGAATATTTTGGCTGTGGGCTGCCCAAAGCATTCCTTAAGATaGGTAGGGGTGAATGGGGGA +
Preference number: 2 (lower is better)
Translates to: NSGKPRNSYMNILAVGCPKHSLR*VGVNGG
Trigger: TCCCCCATTCACCCCTACTCATCTTAAGGAATGCTT...TGGGCAGCCCACAGCCAAAATATTCATGTAAGAGTTTCTAGGCTTCCCACTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR CAA 90 bp AGGATTCACCCAGCAGACAACAGATCTAGCGAGCTGAGGTTCAAATaGGGCCTTCTTCAAAATAGTTTTCCTTGCCTCTATTGTCTAGTG +
Preference number: 2 (lower is better)
Translates to: RIHPADNRSSELRFK*GLLQNSFPCLYCLV
Trigger: CACTAGACAATAGAGGCAAGGAAAACTATTTTGAAGAAGGCCCAATTTGAACCTCAGCTCGCTAGATCTGTTGTCTGCTGGGTGAATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR-3UTR TCA 90 bp TTCCTGTGCAGAACACTTCCTCACCACTTTCAGTCCTGGCCAGTTGCAAAATGGCCTCCTCTTAGTCTTTaGTACTTCTATTTTGTCCAA +
Preference number: 2 (lower is better)
Translates to: FLCRTLPHHFQSWPVAKWPPLSL*YFYFVQ
Trigger: TTGGACAAAATAGAAGTATCAAAGACTAAGAGGAGG...CCATTTTGCAACTGGCCAGGACTGAAAGTGGTGAGGAAGTGTTCTGCACAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR CAA 90 bp GCATTTCCTCTTGCACCATATGTGAGCTTGCAGAACTGCAAAGGGTaGAGAATGACCCACAGTGACTCTGAAAAGATCTACAACCTTAAA +
Preference number: 2 (lower is better)
Translates to: AFPLAPYVSLQNCKG*RMTHSDSEKIYNLK
Trigger: TTTAAGGTTGTAGATCTTTTCAGAGTCACTGTGGGTCATTCTCAACCCTTTGCAGTTCTGCAAGCTCACATATGGTGCAAGAGGAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR-3UTR TCA 90 bp ATACACACATCATGTTATATGGAGGCTGTTCCACAAATAGTGATTCTGAGTTGCCTCTTCCATGAGCAATaGATTCCCCAGGATTCACCC +
Preference number: 2 (lower is better)
Translates to: IHTSCYMEAVPQIVILSCLFHEQ*IPQDSP
Trigger: GGGTGAATCCTGGGGAATTCATTGCTCATGGAAGAG...GCAACTCAGAATCACTATTTGTGGAACAGCCTCCATATAACATGATGTGTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR-3UTR CCA 90 bp TTCCTGTGCAGAACACTTCCTCACCACTTTCAGTCCTGGCCAGTTGCAAAATGGCCTCTTAAGTCCATTTaGTTTCTGTATCAATTAACC +
Preference number: 2 (lower is better)
Translates to: FLCRTLPHHFQSWPVAKWPLKSI*FLYQLT
Trigger: GGTTAATTGATACAGAAACCAAATGGACTTAAGAGG...CCATTTTGCAACTGGCCAGGACTGAAAGTGGTGAGGAAGTGTTCTGCACAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR CAA 90 bp GGCTGTGGGCTGCCCAAGTCCCTCTGCTATAATTCTCCTCAAGAGTaGTTTAGCTATATCAACTTCGGTGATGATAATTCTGCAATAAAA +
Preference number: 2 (lower is better)
Translates to: GCGLPKSLCYNSPQE*FSYINFGDDNSAIK
Trigger: TTTTATTGCAGAATTATCATCACCGAAGTTGATATAGCTAAACAACTCTTGAGGAGAATTATAGCAGAGGGACTTGGGCAGCCCACAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR CAA 90 bp CAATCAATAAATAGTGGGAAGCCTAGAAACTCTTACATGAATATTTaGGCTGTGGGCTGCCCAAGTCCCTCTGCTATAATTCTCCTCAAG +
Preference number: 2 (lower is better)
Translates to: QSINSGKPRNSYMNI*AVGCPSPSAIILLK
Trigger: CTTGAGGAGAATTATAGCAGAGGGACTTGGGCAGCCCACAGCCAAAATATTCATGTAAGAGTTTCTAGGCTTCCCACTATTTATTGATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR-3UTR TCA 90 bp GTGGTTATTCAAAGCCAGCTATACATCACACACACATACACACATCATGTTATAACAGATCTAGCGAGCTaGGGTTCAAATTGGGCCTTC +
Preference number: 2 (lower is better)
Translates to: VVIQSQLYITHTYTHHVITDLAS*GSNWAF
Trigger: GAAGGCCCAATTTGAACCTCAGCTCGCTAGATCTGT...TATAACATGATGTGTGTATGTGTGTGTGATGTATAGCTGGCTTTGAATAACCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR-3UTR CCA 90 bp GTGGTTATTCAAAGCCAGCTATACATCACACACACATACACACATCATGTTATATGGGGGATGACGTACTaGAAACCACATTCCTGGTTC +
Preference number: 2 (lower is better)
Translates to: VVIQSQLYITHTYTHHVIWGMTY*KPHSWF
Trigger: GAACCAGGAATGTGGTTTCCAGTACGTCATCCCCCA...TATAACATGATGTGTGTATGTGTGTGTGATGTATAGCTGGCTTTGAATAACCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR-3UTR GCA 90 bp TGGTTATTCAAAGCCAGCTATACATCACACACACATACACACATCATGTTATATGTTTGGAAACTGCTCTaGTCTGCTCTGGTTCCTCCT +
Preference number: 2 (lower is better)
Translates to: WLFKASYTSHTHTHIMLYVWKLL*SALVPP
Trigger: AGGAGGAACCAGAGCAGAGCAGAGCAGTTTCCAAAC...ATATAACATGATGTGTGTATGTGTGTGTGATGTATAGCTGGCTTTGAATAACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR-3UTR CCA 90 bp TGGTTATTCAAAGCCAGCTATACATCACACACACATACACACATCATGTTATATTCCATGTTCCCTGCCTaGAGATGCTGGAACAGTTTG +
Preference number: 2 (lower is better)
Translates to: WLFKASYTSHTHTHIMLYSMFPA*RCWNSL
Trigger: CAAACTGTTCCAGCATCTCCAGGCAGGGAACATGGA...ATATAACATGATGTGTGTATGTGTGTGTGATGTATAGCTGGCTTTGAATAACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR-3UTR CCA 90 bp AATAGTGGGAAGCCTAGAAACTCTTACATGAATATTTTGGCTGTGGGCTGCCCACAGAGAACATACCATTaGCCTTTAATATGCATACAT +
Preference number: 2 (lower is better)
Translates to: NSGKPRNSYMNILAVGCPQRTYH*PLICIH
Trigger: ATGTATGCATATTAAAGGCCAATGGTATGTTCTCTG...TGGGCAGCCCACAGCCAAAATATTCATGTAAGAGTTTCTAGGCTTCCCACTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR CAA 90 bp ACTGTGTATGTATTACAGTGTCCTTTAGAAAGGATAAGAAGTACCTaGGAGTATGTGAGTATACATTGTGTACCATGGAGTATGAAGGAT +
Preference number: 2 (lower is better)
Translates to: TVYVLQCPLERIRST*EYVSIHCVPWSMKD
Trigger: ATCCTTCATACTCCATGGTACACAATGTATACTCACATACTCCAAGGTACTTCTTATCCTTTCTAAAGGACACTGTAATACATACACAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR-3UTR TCA 90 bp AAGGGTTTTACCAGCACACCACTGTCATATGTATTAGACATAAAGAAAATTTGCATGCATACATTTGAGTaGGTCATGCATGTAGATGAG +
Preference number: 2 (lower is better)
Translates to: KGFTSTPLSYVLDIKKICMHTFE*VMHVDE
Trigger: CTCATCTACATGCATGACTCACTCAAATGTATGCAT...GCAAATTTTCTTTATGTCTAATACATATGACAGTGGTGTGCTGGTAAAACCCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR-3UTR GCA 90 bp ATACACACATCATGTTATATGGAGGCTGTTCCACAAATAGTGATTCTGAGTTGCCATTGGCCTTTAATATaGATACATTTGAGTGAGTCA +
Preference number: 2 (lower is better)
Translates to: IHTSCYMEAVPQIVILSCHWPLI*IHLSES
Trigger: TGACTCACTCAAATGTATGCATATTAAAGGCCAATG...GCAACTCAGAATCACTATTTGTGGAACAGCCTCCATATAACATGATGTGTGTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR CCA 72 bp GTGACACCGGTGTGCTGCCGGGGTTCCGGTGGGAGCTaGGAGAACTCCTCTACGGGCTGTGTCTTTTCACTT +
Preference number: 3 (lower is better)
Translates to: VTPVCCRGSGGS*ENSSTGCVFSL
Trigger: AAGTGAAAAGACACAGCCCGTAGAGGAGTTCTCCCAGCTCCCACCGGAACCCCGGCAGCACACCGGTGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR CCA 72 bp GTTGAAAGTGACACCGGTGTGCTGCCGGGGTTCCGGTaGGAGCTGGGAGAACTCCTCTACGGGCTGTGTCTT +
Preference number: 3 (lower is better)
Translates to: VESDTGVLPGFR*ELGELLYGLCL
Trigger: AAGACACAGCCCGTAGAGGAGTTCTCCCAGCTCCCACCGGAACCCCGGCAGCACACCGGTGTCACTTTCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR-3UTR CAA 90 bp CCCGGAGCCAGCAGCGCACACAGTGGAAAGCAGGGCTGGCACATCCTTAACATTCCCTTCAAGCATCCTTaGCCAGGCCCCTCCTCTCTG +
Preference number: 3 (lower is better)
Translates to: PGASSAHSGKQGWHILNIPFKHP*PGPSSL
Trigger: CAGAGAGGAGGGGCCTGGCAAAGGATGCTTGAAGGG...AATGTTAAGGATGTGCCAGCCCTGCTTTCCACTGTGTGCGCTGCTGGCTCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR GCA 72 bp TTCCTGTCAATGCAGGAGTTGAAAGTGACACCGGTGTaGTGCCGGGGTTCCGGTGGGAGCTGGGAGAACTCC +
Preference number: 3 (lower is better)
Translates to: FLSMQELKVTPV*CRGSGGSWENS
Trigger: GGAGTTCTCCCAGCTCCCACCGGAACCCCGGCAGCACACCGGTGTCACTTTCAACTCCTGCATTGACAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR-3UTR CAA 90 bp CCCGGAGCCAGCAGCGCACACAGTGGAAAGCAGGGCTGGCACATCCTTAACATTTGCCTTGACCAGGAGTaGCCCTCTGGAGCACATTGG +
Preference number: 3 (lower is better)
Translates to: PGASSAHSGKQGWHILNICLDQE*PSGAHW
Trigger: CCAATGTGCTCCAGAGGGCAACTCCTGGTCAAGGCA...AATGTTAAGGATGTGCCAGCCCTGCTTTCCACTGTGTGCGCTGCTGGCTCCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR-3UTR CAA 90 bp GGGCGCTGGCACATTGGCCGCCCCACCACTATCAAGCCAGGTGCTCACAAAACCAGTTTTGCAAGCCAGTaGACATCACCTTGGCAGCTC +
Preference number: 3 (lower is better)
Translates to: GRWHIGRPTTIKPGAHKTSFASQ*TSPWQL
Trigger: GAGCTGCCAAGGTGATGTCAACTGGCTTGCAAAACT...GGTTTTGTGAGCACCTGGCTTGATAGTGGTGGGGCGGCCAATGTGCCAGCGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR-3UTR CAA 90 bp GGGCGCTGGCACATTGGCCGCCCCACCACTATCAAGCCAGGTGCTCACAAAACCCAGAACTGCAAAGGGTaGAGAATGACCCACAGTGAC +
Preference number: 3 (lower is better)
Translates to: GRWHIGRPTTIKPGAHKTQNCKG*RMTHSD
Trigger: GTCACTGTGGGTCATTCTCAACCCTTTGCAGTTCTG...GGTTTTGTGAGCACCTGGCTTGATAGTGGTGGGGCGGCCAATGTGCCAGCGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR GCA 72 bp TGCCACCTGCCAGGAAAACCCACCGGACCCTTCCTGTaGAGAACACTTCCTCACCACTTTCAGTCCTGGCCA +
Preference number: 3 (lower is better)
Translates to: CHLPGKPTGPFL*RTLPHHFQSWP
Trigger: TGGCCAGGACTGAAAGTGGTGAGGAAGTGTTCTGCACAGGAAGGGTCCGGTGGGTTTTCCTGGCAGGTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR GCA 72 bp TGTCTGTGGTGTTCGCTGATTTCCAATGTCCATGAATaGTCAGTAGGCGGGCGCTGGCACATTGGCCGCCCC +
Preference number: 3 (lower is better)
Translates to: CLWCSLISNVHE*SVGGRWHIGRP
Trigger: GGGGCGGCCAATGTGCCAGCGCCCGCCTACTGAGCATTCATGGACATTGGAAATCAGCGAACACCACAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR CCA 72 bp ATTTCCAATGTCCATGAATGCTCAGTAGGCGGGCGCTaGCACATTGGCCGCCCCACCACTATCAAGCCAGGT +
Preference number: 3 (lower is better)
Translates to: ISNVHECSVGGR*HIGRPTTIKPG
Trigger: ACCTGGCTTGATAGTGGTGGGGCGGCCAATGTGCCAGCGCCCGCCTACTGAGCATTCATGGACATTGGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR-3UTR CAA 90 bp CCCGGAGCCAGCAGCGCACACAGTGGAAAGCAGGGCTGGCACATCCTTAACATTAGATGCTGGAACAGTTaGGAAACTGCTCTGCTCTGC +
Preference number: 3 (lower is better)
Translates to: PGASSAHSGKQGWHILNIRCWNS*ETALLC
Trigger: GCAGAGCAGAGCAGTTTCCAAACTGTTCCAGCATCT...AATGTTAAGGATGTGCCAGCCCTGCTTTCCACTGTGTGCGCTGCTGGCTCCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR GCA 72 bp CTCCCCTTCAAGTACCCTCCCAACCCCTCTACTCTCTaGAGCAGCAATGGCCAGTACTCATGGCCTTGCTTT +
Preference number: 3 (lower is better)
Translates to: LPFKYPPNPSTL*SSNGQYSWPCF
Trigger: AAAGCAAGGCCATGAGTACTGGCCATTGCTGCTGCAGAGAGTAGAGGGGTTGGGAGGGTACTTGAAGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR GCA 72 bp GTTCCCTGCCTGGAGATGCTGGAACAGTTTGGAAACTaGTCTGCTCTGCTCTGGTTCCTCCTGCACAAAGCC +
Preference number: 3 (lower is better)
Translates to: VPCLEMLEQFGN*SALLWFLLHKA
Trigger: GGCTTTGTGCAGGAGGAACCAGAGCAGAGCAGAGCAGTTTCCAAACTGTTCCAGCATCTCCAGGCAGGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR GCA 72 bp CTGCCTGGAGATGCTGGAACAGTTTGGAAACTGCTCTaGTCTGCTCTGGTTCCTCCTGCACAAAGCCCAGAA +
Preference number: 3 (lower is better)
Translates to: LPGDAGTVWKLL*SALVPPAQSPE
Trigger: TTCTGGGCTTTGTGCAGGAGGAACCAGAGCAGAGCAGAGCAGTTTCCAAACTGTTCCAGCATCTCCAGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR GCA 72 bp GCTGGTTTCTTCTGTTTTCCTGCCTTGACCAGGAGTTaGCCTCTGGAGCACATTGGTCCTCCATGGGTTCAT +
Preference number: 3 (lower is better)
Translates to: AGFFCFPALTRS*PLEHIGPPWVH
Trigger: ATGAACCCATGGAGGACCAATGTGCTCCAGAGGGCAACTCCTGGTCAAGGCAGGAAAACAGAAGAAACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR-3UTR CAA 90 bp CCCGGAGCCAGCAGCGCACACAGTGGAAAGCAGGGCTGGCACATCCTTAACATTGAGCTGAGGTTCAAATaGGGCCTTCTTCAAAATAGT +
Preference number: 3 (lower is better)
Translates to: PGASSAHSGKQGWHILNIELRFK*GLLQNS
Trigger: ACTATTTTGAAGAAGGCCCAATTTGAACCTCAGCTC...AATGTTAAGGATGTGCCAGCCCTGCTTTCCACTGTGTGCGCTGCTGGCTCCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR GCA 72 bp CTCTGCTCTGGTTCCTCCTGCACAAAGCCCAGAATATaGTTGCCAGGTAGAGGGAAATGGTTAGGGGTTAAG +
Preference number: 3 (lower is better)
Translates to: LCSGSSCTKPRI*LPGRGKWLGVK
Trigger: CTTAACCCCTAACCATTTCCCTCTACCTGGCAAGCATATTCTGGGCTTTGTGCAGGAGGAACCAGAGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR-3UTR CAA 90 bp GCCAGGAAAACCCACCGGACCCTTCCTGTGCAGAACACTTCCTCACCACTTTCAATTCAGGCTTGGCTTTaGAGTCATTTGCTTGTGTGT +
Preference number: 3 (lower is better)
Translates to: ARKTHRTLPVQNTSSPLSIQAWL*SHLLVC
Trigger: ACACACAAGCAAATGACTCAAAAGCCAAGCCTGAAT...TGAAAGTGGTGAGGAAGTGTTCTGCACAGGAAGGGTCCGGTGGGTTTTCCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR-3UTR CAA 90 bp CCTAGAAACTCTTACATGAATATTTTGGCTGTGGGCTGCCCAAGTCCCTCTGCTCTGTCAATGCAGGAGTaGAAAGTGACACCGGTGTGC +
Preference number: 3 (lower is better)
Translates to: PRNSYMNILAVGCPSPSALSMQE*KVTPVC
Trigger: GCACACCGGTGTCACTTTCAACTCCTGCATTGACAG...AGCAGAGGGACTTGGGCAGCCCACAGCCAAAATATTCATGTAAGAGTTTCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR TCA 72 bp CCACTGACGGTCAAAACACCACTCTTCCATGAGCAATaGATTCCCCAGGATTCACCCAGCAGACAACAGATC +
Preference number: 3 (lower is better)
Translates to: PLTVKTPLFHEQ*IPQDSPSRQQI
Trigger: GATCTGTTGTCTGCTGGGTGAATCCTGGGGAATTCATTGCTCATGGAAGAGTGGTGTTTTGACCGTCAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR-3UTR CAA 90 bp AATAGTGGGAAGCCTAGAAACTCTTACATGAATATTTTGGCTGTGGGCTGCCCAAACAGGGAGGTGGCATaGCCAGGAAATGGCAAGTCC +
Preference number: 3 (lower is better)
Translates to: NSGKPRNSYMNILAVGCPNREVA*PGNGKS
Trigger: GGACTTGCCATTTCCTGGCAATGCCACCTCCCTGTT...TGGGCAGCCCACAGCCAAAATATTCATGTAAGAGTTTCTAGGCTTCCCACTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR GCA 72 bp ACATTCCTGGTTCTAACAGGAACCATCCATGTTCCCTaGCTGGAGATGCTGGAACAGTTTGGAAACTGCTCT +
Preference number: 3 (lower is better)
Translates to: TFLVLTGTIHVP*LEMLEQFGNCS
Trigger: AGAGCAGTTTCCAAACTGTTCCAGCATCTCCAGGCAGGGAACATGGATGGTTCCTGTTAGAACCAGGAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR CCA 72 bp GAACATGACCGTGCATCAGCTGATTCGGTGTGTCTGTaGTGTTCGCTGATTTCCAATGTCCATGAATGCTCA +
Preference number: 3 (lower is better)
Translates to: EHDRASADSVCL*CSLISNVHECS
Trigger: TGAGCATTCATGGACATTGGAAATCAGCGAACACCACAGACACACCGAATCAGCTGATGCACGGTCATGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR-3UTR CAA 90 bp CCTAGAAACTCTTACATGAATATTTTGGCTGTGGGCTGCCCAAGTCCCTCTGCTTTCAGTCCTGGCCAGTaGCAAAATGGGAAGATGGTA +
Preference number: 3 (lower is better)
Translates to: PRNSYMNILAVGCPSPSAFSPGQ*QNGKMV
Trigger: TACCATCTTCCCATTTTGCAACTGGCCAGGACTGAA...AGCAGAGGGACTTGGGCAGCCCACAGCCAAAATATTCATGTAAGAGTTTCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR GCA 72 bp GGCCTTGCTTTCCTATTGTCTCAGGAACAGATTTCATaGTGGTTTCTTCTGTTTTCCTGCCTTGACCAGGAG +
Preference number: 3 (lower is better)
Translates to: GLAFLLSQEQIS*WFLLFSCLDQE
Trigger: CTCCTGGTCAAGGCAGGAAAACAGAAGAAACCAGCATGAAATCTGTTCCTGAGACAATAGGAAAGCAAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR GCA 72 bp GCATTTCCTCTTGCACCATATGTGAGCTTGCAGAACTaGAAAGGGTTGAGAATGACCCACAGTGACTCTGAA +
Preference number: 3 (lower is better)
Translates to: AFPLAPYVSLQN*KGLRMTHSDSE
Trigger: TTCAGAGTCACTGTGGGTCATTCTCAACCCTTTGCAGTTCTGCAAGCTCACATATGGTGCAAGAGGAAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR CCA 72 bp TTCCTGTGCAGAACACTTCCTCACCACTTTCAGTCCTaGCCAGTTGCAAAATGGGAAGATGGTAAGATGAGA +
Preference number: 3 (lower is better)
Translates to: FLCRTLPHHFQS*PVAKWEDGKMR
Trigger: TCTCATCTTACCATCTTCCCATTTTGCAACTGGCCAGGACTGAAAGTGGTGAGGAAGTGTTCTGCACAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR CCA 72 bp CTTAAGGAAGCATTCCTTAAGATGAGTAGGGGTGAATaGGGGATGACGTACTGGAAACCACATTCCTGGTTC +
Preference number: 3 (lower is better)
Translates to: LKEAFLKMSRGE*GMTYWKPHSWF
Trigger: GAACCAGGAATGTGGTTTCCAGTACGTCATCCCCCATTCACCCCTACTCATCTTAAGGAATGCTTCCTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR-3UTR CAA 90 bp GCTCTGGTTCCTCCTGCACAAAGCCCAGAATATGCTTGCCAGGTAGAGGGAAATACAGAGAACATACCATaGGCCTTTAATATGCATACA +
Preference number: 3 (lower is better)
Translates to: ALVPPAQSPEYACQVEGNTENIP*AFNMHT
Trigger: TGTATGCATATTAAAGGCCAATGGTATGTTCTCTGT...ATTTCCCTCTACCTGGCAAGCATATTCTGGGCTTTGTGCAGGAGGAACCAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR TCA 72 bp CCAGGATTCACCCAGCAGACAACAGATCTAGCGAGCTaGGGTTCAAATTGGGCCTTCTTCAAAATAGTTTTC +
Preference number: 3 (lower is better)
Translates to: PGFTQQTTDLAS*GSNWAFFKIVF
Trigger: GAAAACTATTTTGAAGAAGGCCCAATTTGAACCTCAGCTCGCTAGATCTGTTGTCTGCTGGGTGAATCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR TCA 72 bp AATTTGACCAATCACATCTCTGAATTTCTGGGTCAGTaGCGGCAACAGGTGAATTCAGAGGGGAAGTACCAG +
Preference number: 3 (lower is better)
Translates to: NLTNHISEFLGQ*RQQVNSEGKYQ
Trigger: CTGGTACTTCCCCTCTGAATTCACCTGTTGCCGTCACTGACCCAGAAATTCAGAGATGTGATTGGTCAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR GCA 72 bp ACCTTGGCAGCTCAAGATAGACCATGTAGGAGCGTTTaGAGCATTGAAATCCACAAATCAGGGCTTTTTCTC +
Preference number: 3 (lower is better)
Translates to: TLAAQDRPCRSV*SIEIHKSGLFL
Trigger: GAGAAAAAGCCCTGATTTGTGGATTTCAATGCTGCAAACGCTCCTACATGGTCTATCTTGAGCTGCCAAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR CCA 72 bp AGTACCTTGGAGTATGTGAGTATACATTGTGTACCATaGAGTATGAAGGATGCACCACGTTCCACTGAGGGT +
Preference number: 3 (lower is better)
Translates to: STLEYVSIHCVP*SMKDAPRSTEG
Trigger: ACCCTCAGTGGAACGTGGTGCATCCTTCATACTCCATGGTACACAATGTATACTCACATACTCCAAGGTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR CCA 72 bp GGTTTTAGAAGTTTTGCAAGCCAGTTGACATCACCTTaGCAGCTCAAGATAGACCATGTAGGAGCGTTTGCA +
Preference number: 3 (lower is better)
Translates to: GFRSFASQLTSP*QLKIDHVGAFA
Trigger: TGCAAACGCTCCTACATGGTCTATCTTGAGCTGCCAAGGTGATGTCAACTGGCTTGCAAAACTTCTAAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR TCA 72 bp GCAGGGGTGCTGAGACAAGGGAACAGTGTTAACAGGTaGAGAAAGATATTAACATCCTTTCTTCCAACAGAC +
Preference number: 3 (lower is better)
Translates to: AGVLRQGNSVNR*RKILTSFLPTD
Trigger: GTCTGTTGGAAGAAAGGATGTTAATATCTTTCTTCACCTGTTAACACTGTTCCCTTGTCTCAGCACCCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR GCA 72 bp TTACATCTGGATGGGCAGAAAGAAACAACTGGGCTATaGAGCCTGATCGCCAACAGCCTATATTTTCATATC +
Preference number: 3 (lower is better)
Translates to: LHLDGQKETTGL*SLIANSLYFHI
Trigger: GATATGAAAATATAGGCTGTTGGCGATCAGGCTGCATAGCCCAGTTGTTTCTTTCTGCCCATCCAGATGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR GCA 72 bp CCTAGAAACTCTTACATGAATATTTTGGCTGTGGGCTaGCCAAGTCCCTCTGCTATAATTCTCCTCAAGAGT +
Preference number: 3 (lower is better)
Translates to: PRNSYMNILAVG*PSPSAIILLKS
Trigger: ACTCTTGAGGAGAATTATAGCAGAGGGACTTGGGCAGCCCACAGCCAAAATATTCATGTAAGAGTTTCTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR TCA 72 bp ATGGCTTTCTCAAAGCATCAATCACTGTATACCCACTaGCGGTCAAAACACCACTCTTCCATGAGCAATGAA +
Preference number: 3 (lower is better)
Translates to: MAFSKHQSLYTH*RSKHHSSMSNE
Trigger: TTCATTGCTCATGGAAGAGTGGTGTTTTGACCGTCAGTGGGTATACAGTGATTGATGCTTTGAGAAAGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR GCA 72 bp CATGAATATTTTGGCTGTGGGCTGCCCAAGTCCCTCTaGTATAATTCTCCTCAAGAGTTGTTTAGCTATATC +
Preference number: 3 (lower is better)
Translates to: HEYFGCGLPKSL*YNSPQELFSYI
Trigger: GATATAGCTAAACAACTCTTGAGGAGAATTATAGCAGAGGGACTTGGGCAGCCCACAGCCAAAATATTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR-3UTR CAA 90 bp GTGGTTATTCAAAGCCAGCTATACATCACACACACATACACACATCATGTTATACCAGTACTCATGGCCTaGCTTTCCTATTGTCTCAGG +
Preference number: 3 (lower is better)
Translates to: VVIQSQLYITHTYTHHVIPVLMA*LSYCLR
Trigger: CCTGAGACAATAGGAAAGCAAGGCCATGAGTACTGG...TATAACATGATGTGTGTATGTGTGTGTGATGTATAGCTGGCTTTGAATAACCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR TCA 72 bp GGTCCAATTACAAATGAATTTGACCAATCACATCTCTaGATTTCTGGGTCAGTGACGGCAACAGGTGAATTC +
Preference number: 3 (lower is better)
Translates to: GPITNEFDQSHL*ISGSVTATGEF
Trigger: GAATTCACCTGTTGCCGTCACTGACCCAGAAATTCAGAGATGTGATTGGTCAAATTCATTTGTAATTGGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR GCA 72 bp CATCCCTTCTGTGTTCTAGGCAAGTTAAAAAGGTTTTaGCAGAACACTGCTAGGCTTCATAATCTGTTGATG +
Preference number: 3 (lower is better)
Translates to: HPFCVLGKLKRF*QNTARLHNLLM
Trigger: CATCAACAGATTATGAAGCCTAGCAGTGTTCTGGCAAAACCTTTTTAACTTGCCTAGAACACAGAAGGGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR GCA 72 bp TATATGGAGGCTGTTCCACAAATAGTGATTCTGAGTTaGATGGCTTTCTCAAAGCATCAATCACTGTATACC +
Preference number: 3 (lower is better)
Translates to: YMEAVPQIVILS*MAFSKHQSLYT
Trigger: GGTATACAGTGATTGATGCTTTGAGAAAGCCATGCAACTCAGAATCACTATTTGTGGAACAGCCTCCATATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR CCA 72 bp GTAAGATTCTACCTTTTTAAGGATCTGACAATATTCTaGCTTCCTGTCAATGCAGGAGTTGAAAGTGACACC +
Preference number: 3 (lower is better)
Translates to: VRFYLFKDLTIF*LPVNAGVESDT
Trigger: GGTGTCACTTTCAACTCCTGCATTGACAGGAAGCCAGAATATTGTCAGATCCTTAAAAAGGTAGAATCTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR TCA 72 bp AACATACCATTGGCCTTTAATATGCATACATTTGAGTaGGTCATGCATGTAGATGAGTATAACCTGCCTGCA +
Preference number: 3 (lower is better)
Translates to: NIPLAFNMHTFE*VMHVDEYNLPA
Trigger: TGCAGGCAGGTTATACTCATCTACATGCATGACTCACTCAAATGTATGCATATTAAAGGCCAATGGTATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR CCA 72 bp TTTCCTGTTGTACCTCTAAGACCTCTTAAGTCCATTTaGTTTCTGTATCAATTAACCCTTCCCTTCAAGCAT +
Preference number: 3 (lower is better)
Translates to: FPVVPLRPLKSI*FLYQLTLPFKH
Trigger: ATGCTTGAAGGGAAGGGTTAATTGATACAGAAACCAAATGGACTTAAGAGGTCTTAGAGGTACAACAGGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR GCA 72 bp AGGTTCAAATTGGGCCTTCTTCAAAATAGTTTTCCTTaGCTCTATTGTCTAGTGCAGTTTGAGTTTATAACC +
Preference number: 3 (lower is better)
Translates to: RFKLGLLQNSFP*LYCLVQFEFIT
Trigger: GGTTATAAACTCAAACTGCACTAGACAATAGAGGCAAGGAAAACTATTTTGAAGAAGGCCCAATTTGAACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR GCA 72 bp GAAAATATACTACAAAGCATGCTTGTAGGCACAGCATaGCTGCAAGACACAAATATACAAAATTATGGCAAG +
Preference number: 3 (lower is better)
Translates to: ENILQSMLVGTA*LQDTNIQNYGK
Trigger: CTTGCCATAATTTTGTATATTTGTGTCTTGCAGGCATGCTGTGCCTACAAGCATGCTTTGTAGTATATTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR-3UTR CAA 90 bp GTGGTTATTCAAAGCCAGCTATACATCACACACACATACACACATCATGTTATATTTCAAAATTCAGGCTaGGCTTTTGAGTCATTTGCT +
Preference number: 3 (lower is better)
Translates to: VVIQSQLYITHTYTHHVIFQNSG*AFESFA
Trigger: AGCAAATGACTCAAAAGCCAAGCCTGAATTTTGAAA...TATAACATGATGTGTGTATGTGTGTGTGATGTATAGCTGGCTTTGAATAACCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CCA 90 bp GGGCGCTGGCACATTGGCCGCCCCACCACTATCAAGCCAGGTGCTCACAAAACCCTGCCGGGGTTCCGGTaGGAGCTGGGAGAACTCCTC +
Preference number: 4 (lower is better)
Translates to: GRWHIGRPTTIKPGAHKTLPGFR*ELGELL
Trigger: GAGGAGTTCTCCCAGCTCCCACCGGAACCCCGGCAG...GGTTTTGTGAGCACCTGGCTTGATAGTGGTGGGGCGGCCAATGTGCCAGCGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR TCA 90 bp GGGCGCTGGCACATTGGCCGCCCCACCACTATCAAGCCAGGTGCTCACAAAACCGGGATGGGAGGAAGGTaGGAGGCACTAGGGCCAAGA +
Preference number: 4 (lower is better)
Translates to: GRWHIGRPTTIKPGAHKTGMGGR*EALGPR
Trigger: TCTTGGCCCTAGTGCCTCTCACCTTCCTCCCATCCC...GGTTTTGTGAGCACCTGGCTTGATAGTGGTGGGGCGGCCAATGTGCCAGCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR TCA 90 bp GGGCGCTGGCACATTGGCCGCCCCACCACTATCAAGCCAGGTGCTCACAAAACCCCCACCCAATCTCCTTaGAGTCGATGTAGAGCGGGG +
Preference number: 4 (lower is better)
Translates to: GRWHIGRPTTIKPGAHKTPTQSP*SRCRAG
Trigger: CCCCGCTCTACATCGACTTCAAGGAGATTGGGTGGG...GGTTTTGTGAGCACCTGGCTTGATAGTGGTGGGGCGGCCAATGTGCCAGCGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CCA 90 bp TTTCTCCAGAAGCCCGGAGCCAGCAGCGCACACAGTGGAAAGCAGGGCTGGCACCCTCCAGCTGGTGGGTaGATGAGCCTGACTTTTGCC +
Preference number: 4 (lower is better)
Translates to: FLQKPGASSAHSGKQGWHPPAGG*MSLTFA
Trigger: GGCAAAAGTCAGGCTCATCCACCCACCAGCTGGAGG...GTGCCAGCCCTGCTTTCCACTGTGTGCGCTGCTGGCTCCGGGCTTCTGGAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CCA 90 bp TTTCTCCAGAAGCCCGGAGCCAGCAGCGCACACAGTGGAAAGCAGGGCTGGCACTGGACCTCCAGCTGGTaGGTGGATGAGCCTGACTTT +
Preference number: 4 (lower is better)
Translates to: FLQKPGASSAHSGKQGWHWTSSW*VDEPDF
Trigger: AAAGTCAGGCTCATCCACCCACCAGCTGGAGGTCCA...GTGCCAGCCCTGCTTTCCACTGTGTGCGCTGCTGGCTCCGGGCTTCTGGAGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CCA 90 bp GGGCGCTGGCACATTGGCCGCCCCACCACTATCAAGCCAGGTGCTCACAAAACCTGTTGGCAGAGGGCATaGAGGTCCGATCTGTTGCAA +
Preference number: 4 (lower is better)
Translates to: GRWHIGRPTTIKPGAHKTCWQRA*RSDLLQ
Trigger: TTGCAACAGATCGGACCTCCATGCCCTCTGCCAACA...GGTTTTGTGAGCACCTGGCTTGATAGTGGTGGGGCGGCCAATGTGCCAGCGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CCA 90 bp GCCAGGAAAACCCACCGGACCCTTCCTGTGCAGAACACTTCCTCACCACTTTCACGGGCGCTGGCACATTaGCCGCCCCACCACTATCAA +
Preference number: 4 (lower is better)
Translates to: ARKTHRTLPVQNTSSPLSRALAH*PPHHYQ
Trigger: TTGATAGTGGTGGGGCGGCCAATGTGCCAGCGCCCG...TGAAAGTGGTGAGGAAGTGTTCTGCACAGGAAGGGTCCGGTGGGTTTTCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CCA 90 bp GCTCTGGTTCCTCCTGCACAAAGCCCAGAATATGCTTGCCAGGTAGAGGGAAATTCAGTAGGCGGGCGCTaGCACATTGGCCGCCCCACC +
Preference number: 4 (lower is better)
Translates to: ALVPPAQSPEYACQVEGNSVGGR*HIGRPT
Trigger: GGTGGGGCGGCCAATGTGCCAGCGCCCGCCTACTGA...ATTTCCCTCTACCTGGCAAGCATATTCTGGGCTTTGTGCAGGAGGAACCAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR GCA 90 bp GGGCGCTGGCACATTGGCCGCCCCACCACTATCAAGCCAGGTGCTCACAAAACCTCTTCCAGAGGAGACTaGTCTAGGTTCATGATGGGG +
Preference number: 4 (lower is better)
Translates to: GRWHIGRPTTIKPGAHKTSSRGD*SRFMMG
Trigger: CCCCATCATGAACCTAGAGCAGTCTCCTCTGGAAGA...GGTTTTGTGAGCACCTGGCTTGATAGTGGTGGGGCGGCCAATGTGCCAGCGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR GCA 90 bp GGGCGCTGGCACATTGGCCGCCCCACCACTATCAAGCCAGGTGCTCACAAAACCGTTTGGAAACTGCTCTaGTCTGCTCTGGTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GRWHIGRPTTIKPGAHKTVWKLL*SALVPP
Trigger: AGGAGGAACCAGAGCAGAGCAGAGCAGTTTCCAAAC...GGTTTTGTGAGCACCTGGCTTGATAGTGGTGGGGCGGCCAATGTGCCAGCGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR GCA 90 bp TTCCTGTGCAGAACACTTCCTCACCACTTTCAGTCCTGGCCAGTTGCAAAATGGGTGACACCGGTGTGCTaGCGGGGTTCCGGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: FLCRTLPHHFQSWPVAKWVTPVC*RGSGGS
Trigger: GCTCCCACCGGAACCCCGGCAGCACACCGGTGTCAC...CCATTTTGCAACTGGCCAGGACTGAAAGTGGTGAGGAAGTGTTCTGCACAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR GCA 90 bp TTTCTCCAGAAGCCCGGAGCCAGCAGCGCACACAGTGGAAAGCAGGGCTGGCACATTTTGGCTGTGGGCTaGCCAAGTCCCTCTGCTATA +
Preference number: 4 (lower is better)
Translates to: FLQKPGASSAHSGKQGWHILAVG*PSPSAI
Trigger: TATAGCAGAGGGACTTGGGCAGCCCACAGCCAAAAT...GTGCCAGCCCTGCTTTCCACTGTGTGCGCTGCTGGCTCCGGGCTTCTGGAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CCA 90 bp TTTCTCCAGAAGCCCGGAGCCAGCAGCGCACACAGTGGAAAGCAGGGCTGGCACTGGCTGAATCCTGCGTaGGGATGTCAGAGAGGTTTA +
Preference number: 4 (lower is better)
Translates to: FLQKPGASSAHSGKQGWHWLNPA*GCQRGL
Trigger: TAAACCTCTCTGACATCCCCACGCAGGATTCAGCCA...GTGCCAGCCCTGCTTTCCACTGTGTGCGCTGCTGGCTCCGGGCTTCTGGAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR GCA 90 bp TTTCTCCAGAAGCCCGGAGCCAGCAGCGCACACAGTGGAAAGCAGGGCTGGCACCAAGGCCTGGATAATTaGATGCTTTGTGGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: FLQKPGASSAHSGKQGWHQGLDN*MLCGCE
Trigger: CTCACACCCACAAAGCATGCAATTATCCAGGCCTTG...GTGCCAGCCCTGCTTTCCACTGTGTGCGCTGCTGGCTCCGGGCTTCTGGAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR GCA 90 bp CCCGGAGCCAGCAGCGCACACAGTGGAAAGCAGGGCTGGCACATCCTTAACATTTGCTCTGGTTCCTCCTaGACAAAGCCCAGAATATGC +
Preference number: 4 (lower is better)
Translates to: PGASSAHSGKQGWHILNICSGSS*TKPRIC
Trigger: GCATATTCTGGGCTTTGTGCAGGAGGAACCAGAGCA...AATGTTAAGGATGTGCCAGCCCTGCTTTCCACTGTGTGCGCTGCTGGCTCCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR GCA 90 bp TTCCTGTGCAGAACACTTCCTCACCACTTTCAGTCCTGGCCAGTTGCAAAATGGAAAGTGACACCGGTGTaGTGCCGGGGTTCCGGTGGG +
Preference number: 4 (lower is better)
Translates to: FLCRTLPHHFQSWPVAKWKVTPV*CRGSGG
Trigger: CCCACCGGAACCCCGGCAGCACACCGGTGTCACTTT...CCATTTTGCAACTGGCCAGGACTGAAAGTGGTGAGGAAGTGTTCTGCACAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR TCA 90 bp CCCGGAGCCAGCAGCGCACACAGTGGAAAGCAGGGCTGGCACATCCTTAACATTGACACCGTCTTGCTCTaGGAAAACATCACCAAAGAG +
Preference number: 4 (lower is better)
Translates to: PGASSAHSGKQGWHILNIDTVLL*ENITKE
Trigger: CTCTTTGGTGATGTTTTCTCAGAGCAAGACGGTGTC...AATGTTAAGGATGTGCCAGCCCTGCTTTCCACTGTGTGCGCTGCTGGCTCCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR TCA 90 bp CCCGGAGCCAGCAGCGCACACAGTGGAAAGCAGGGCTGGCACATCCTTAACATTTCACTGTATACCCACTaGCGGTCAAAACACCACTCT +
Preference number: 4 (lower is better)
Translates to: PGASSAHSGKQGWHILNISLYTH*RSKHHS
Trigger: AGAGTGGTGTTTTGACCGTCAGTGGGTATACAGTGA...AATGTTAAGGATGTGCCAGCCCTGCTTTCCACTGTGTGCGCTGCTGGCTCCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR TCA 90 bp CCCGGAGCCAGCAGCGCACACAGTGGAAAGCAGGGCTGGCACATCCTTAACATTGAATTTCTGGGTCAGTaGCGGCAACAGGTGAATTCA +
Preference number: 4 (lower is better)
Translates to: PGASSAHSGKQGWHILNIEFLGQ*RQQVNS
Trigger: TGAATTCACCTGTTGCCGTCACTGACCCAGAAATTC...AATGTTAAGGATGTGCCAGCCCTGCTTTCCACTGTGTGCGCTGCTGGCTCCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CCA 90 bp GCTCTGGTTCCTCCTGCACAAAGCCCAGAATATGCTTGCCAGGTAGAGGGAAATATGTGGACCTCCAGCTaGTGGGTGGATGAGCCTGAC +
Preference number: 4 (lower is better)
Translates to: ALVPPAQSPEYACQVEGNMWTSS*WVDEPD
Trigger: GTCAGGCTCATCCACCCACCAGCTGGAGGTCCACAT...ATTTCCCTCTACCTGGCAAGCATATTCTGGGCTTTGTGCAGGAGGAACCAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CCA 90 bp AGCCCGGAGCCAGCAGCGCACACAGTGGAAAGCAGGGCTGGCACATCCTTAACAGGCATTGCCAGGAAATaGCAAGTCCAAAGAGAAAAC +
Preference number: 4 (lower is better)
Translates to: SPEPAAHTVESRAGTSLTGIARK*QVQREN
Trigger: GTTTTCTCTTTGGACTTGCCATTTCCTGGCAATGCC...TGTTAAGGATGTGCCAGCCCTGCTTTCCACTGTGTGCGCTGCTGGCTCCGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CCA 90 bp AGCCCGGAGCCAGCAGCGCACACAGTGGAAAGCAGGGCTGGCACATCCTTAACAAGTGGAAAGCAGGGCTaGCACATCCTTAACATTCTA +
Preference number: 4 (lower is better)
Translates to: SPEPAAHTVESRAGTSLTSGKQG*HILNIL
Trigger: TAGAATGTTAAGGATGTGCCAGCCCTGCTTTCCACT...TGTTAAGGATGTGCCAGCCCTGCTTTCCACTGTGTGCGCTGCTGGCTCCGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR TCA 90 bp GGGCGCTGGCACATTGGCCGCCCCACCACTATCAAGCCAGGTGCTCACAAAACCGTACCTTGGAGTATGTaGGTATACATTGTGTACCAT +
Preference number: 4 (lower is better)
Translates to: GRWHIGRPTTIKPGAHKTVPWSM*VYIVYH
Trigger: ATGGTACACAATGTATACTCACATACTCCAAGGTAC...GGTTTTGTGAGCACCTGGCTTGATAGTGGTGGGGCGGCCAATGTGCCAGCGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR GCA 90 bp AGCCCGGAGCCAGCAGCGCACACAGTGGAAAGCAGGGCTGGCACATCCTTAACATCCAGCTCTGGAAGTTaGTCATGGGAAATCATTTCA +
Preference number: 4 (lower is better)
Translates to: SPEPAAHTVESRAGTSLTSSSGS*SWEIIS
Trigger: TGAAATGATTTCCCATGAGCAACTTCCAGAGCTGGA...TGTTAAGGATGTGCCAGCCCTGCTTTCCACTGTGTGCGCTGCTGGCTCCGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CCA 90 bp GCCAGGAAAACCCACCGGACCCTTCCTGTGCAGAACACTTCCTCACCACTTTCAGCAGAAAGAAACAACTaGGCTATGCAGCCTGATCGC +
Preference number: 4 (lower is better)
Translates to: ARKTHRTLPVQNTSSPLSAERNN*AMQPDR
Trigger: GCGATCAGGCTGCATAGCCCAGTTGTTTCTTTCTGC...TGAAAGTGGTGAGGAAGTGTTCTGCACAGGAAGGGTCCGGTGGGTTTTCCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR CAA 72 bp TGCTGGTTTCTTCTGTTTTCCTGCCTTGACCAGGAGTaGCCCTCTGGAGCACATTGGTCCTCCATGGGTTCA +
Preference number: 4 (lower is better)
Translates to: CWFLLFSCLDQE*PSGAHWSSMGS
Trigger: TGAACCCATGGAGGACCAATGTGCTCCAGAGGGCAACTCCTGGTCAAGGCAGGAAAACAGAAGAAACCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR TCA 90 bp GCTCTGGTTCCTCCTGCACAAAGCCCAGAATATGCTTGCCAGGTAGAGGGAAATACTGCTCTAGGTTCATaGTGGGGCTGCCAGAAACCA +
Preference number: 4 (lower is better)
Translates to: ALVPPAQSPEYACQVEGNTALGS*WGCQKP
Trigger: TGGTTTCTGGCAGCCCCATCATGAACCTAGAGCAGT...ATTTCCCTCTACCTGGCAAGCATATTCTGGGCTTTGTGCAGGAGGAACCAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR TCA 90 bp TTTCTCCAGAAGCCCGGAGCCAGCAGCGCACACAGTGGAAAGCAGGGCTGGCACCCTCCTCTTAGTCTTTaGTACTTCTATTTTGTCCAA +
Preference number: 4 (lower is better)
Translates to: FLQKPGASSAHSGKQGWHPPLSL*YFYFVQ
Trigger: TTGGACAAAATAGAAGTATCAAAGACTAAGAGGAGG...GTGCCAGCCCTGCTTTCCACTGTGTGCGCTGCTGGCTCCGGGCTTCTGGAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR TCA 90 bp GCTCTGGTTCCTCCTGCACAAAGCCCAGAATATGCTTGCCAGGTAGAGGGAAATGGGGTGAATGGGGGATaGCGTACTGGAAACCACATT +
Preference number: 4 (lower is better)
Translates to: ALVPPAQSPEYACQVEGNGVNGG*RTGNHI
Trigger: AATGTGGTTTCCAGTACGTCATCCCCCATTCACCCC...ATTTCCCTCTACCTGGCAAGCATATTCTGGGCTTTGTGCAGGAGGAACCAGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR TCA 90 bp AGCCCGGAGCCAGCAGCGCACACAGTGGAAAGCAGGGCTGGCACATCCTTAACAACCTTTTTAAGGATCTaGCAATATTCTGGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: SPEPAAHTVESRAGTSLTTFLRI*QYSGFL
Trigger: CAGGAAGCCAGAATATTGTCAGATCCTTAAAAAGGT...TGTTAAGGATGTGCCAGCCCTGCTTTCCACTGTGTGCGCTGCTGGCTCCGGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR TCA 90 bp GCTCTGGTTCCTCCTGCACAAAGCCCAGAATATGCTTGCCAGGTAGAGGGAAATAGTGACGGCAACAGGTaGATTCAGAGGGGAAGTACC +
Preference number: 4 (lower is better)
Translates to: ALVPPAQSPEYACQVEGNSDGNR*IQRGST
Trigger: GGTACTTCCCCTCTGAATTCACCTGTTGCCGTCACT...ATTTCCCTCTACCTGGCAAGCATATTCTGGGCTTTGTGCAGGAGGAACCAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR TCA 90 bp GCCAGGAAAACCCACCGGACCCTTCCTGTGCAGAACACTTCCTCACCACTTTCACTCTTGCACCATATGTaGGCTTGCAGAACTGCAAAG +
Preference number: 4 (lower is better)
Translates to: ARKTHRTLPVQNTSSPLSLLHHM*ACRTAK
Trigger: CTTTGCAGTTCTGCAAGCTCACATATGGTGCAAGAG...TGAAAGTGGTGAGGAAGTGTTCTGCACAGGAAGGGTCCGGTGGGTTTTCCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR GCA 90 bp CCCGGAGCCAGCAGCGCACACAGTGGAAAGCAGGGCTGGCACATCCTTAACATTATCATACGATCCCTTTaGACCAGTGTGTATAGCCTA +
Preference number: 4 (lower is better)
Translates to: PGASSAHSGKQGWHILNIIIRSL*TSVYSL
Trigger: TAGGCTATACACACTGGTGCAAAGGGATCGTATGAT...AATGTTAAGGATGTGCCAGCCCTGCTTTCCACTGTGTGCGCTGCTGGCTCCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR GCA 90 bp GAAAACCCACCGGACCCTTCCTGTGCAGAACACTTCCTCACCACTTTCAGTCCTTTTCTAGCCGTCCACTaGTGGCATCCTCAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: ENPPDPSCAEHFLTTFSPFLAVH*WHPQLH
Trigger: ATGAAGCTGAGGATGCCAGCAGTGGACGGCTAGAAA...AGGACTGAAAGTGGTGAGGAAGTGTTCTGCACAGGAAGGGTCCGGTGGGTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR GCA 90 bp TTTCTCCAGAAGCCCGGAGCCAGCAGCGCACACAGTGGAAAGCAGGGCTGGCACCAAAATAGTTTTCCTTaGCTCTATTGTCTAGTGCAG +
Preference number: 4 (lower is better)
Translates to: FLQKPGASSAHSGKQGWHQNSFP*LYCLVQ
Trigger: CTGCACTAGACAATAGAGGCAAGGAAAACTATTTTG...GTGCCAGCCCTGCTTTCCACTGTGTGCGCTGCTGGCTCCGGGCTTCTGGAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CCA 90 bp GAAAACCCACCGGACCCTTCCTGTGCAGAACACTTCCTCACCACTTTCAGTCCTTCCATGTTCCCTGCCTaGAGATGCTGGAACAGTTTG +
Preference number: 4 (lower is better)
Translates to: ENPPDPSCAEHFLTTFSPSMFPA*RCWNSL
Trigger: CAAACTGTTCCAGCATCTCCAGGCAGGGAACATGGA...AGGACTGAAAGTGGTGAGGAAGTGTTCTGCACAGGAAGGGTCCGGTGGGTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CCA 90 bp GAAAACCCACCGGACCCTTCCTGTGCAGAACACTTCCTCACCACTTTCAGTCCTTGGGGGATGACGTACTaGAAACCACATTCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: ENPPDPSCAEHFLTTFSPWGMTY*KPHSWF
Trigger: GAACCAGGAATGTGGTTTCCAGTACGTCATCCCCCA...AGGACTGAAAGTGGTGAGGAAGTGTTCTGCACAGGAAGGGTCCGGTGGGTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CCA 90 bp AATAGTGGGAAGCCTAGAAACTCTTACATGAATATTTTGGCTGTGGGCTGCCCAGGTTCCGGTGGGAGCTaGGAGAACTCCTCTACGGGC +
Preference number: 4 (lower is better)
Translates to: NSGKPRNSYMNILAVGCPGSGGS*ENSSTG
Trigger: GCCCGTAGAGGAGTTCTCCCAGCTCCCACCGGAACC...TGGGCAGCCCACAGCCAAAATATTCATGTAAGAGTTTCTAGGCTTCCCACTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CCA 90 bp AGCCCGGAGCCAGCAGCGCACACAGTGGAAAGCAGGGCTGGCACATCCTTAACAGGGAAGTACCAGATTTaGGGGATGAAAAGATTCATT +
Preference number: 4 (lower is better)
Translates to: SPEPAAHTVESRAGTSLTGKYQI*GMKRFI
Trigger: AATGAATCTTTTCATCCCCCAAATCTGGTACTTCCC...TGTTAAGGATGTGCCAGCCCTGCTTTCCACTGTGTGCGCTGCTGGCTCCGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR TCA 90 bp GAAAACCCACCGGACCCTTCCTGTGCAGAACACTTCCTCACCACTTTCAGTCCTGAGGAATGGACACATTaGAGAGGAGGGGGTATTTTC +
Preference number: 4 (lower is better)
Translates to: ENPPDPSCAEHFLTTFSPEEWTH*RGGGIF
Trigger: GAAAATACCCCCTCCTCTTCAATGTGTCCATTCCTC...AGGACTGAAAGTGGTGAGGAAGTGTTCTGCACAGGAAGGGTCCGGTGGGTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR TCA 90 bp CCCGGAGCCAGCAGCGCACACAGTGGAAAGCAGGGCTGGCACATCCTTAACATTGTCATAGATGATGTTTaGTCTCATCTGCAACAAAGC +
Preference number: 4 (lower is better)
Translates to: PGASSAHSGKQGWHILNIVIDDV*SHLQQS
Trigger: GCTTTGTTGCAGATGAGATCAAACATCATCTATGAC...AATGTTAAGGATGTGCCAGCCCTGCTTTCCACTGTGTGCGCTGCTGGCTCCGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR TCA 90 bp GCTCTGGTTCCTCCTGCACAAAGCCCAGAATATGCTTGCCAGGTAGAGGGAAATGTTTTGCAAGCCAGTTaGCATCACCTTGGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: ALVPPAQSPEYACQVEGNVLQAS*HHLGSS
Trigger: TGAGCTGCCAAGGTGATGTCAACTGGCTTGCAAAAC...ATTTCCCTCTACCTGGCAAGCATATTCTGGGCTTTGTGCAGGAGGAACCAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR GCA 90 bp GAAAACCCACCGGACCCTTCCTGTGCAGAACACTTCCTCACCACTTTCAGTCCTGATGAGCCTGACTTTTaGCAACGTCTGATGGCATCT +
Preference number: 4 (lower is better)
Translates to: ENPPDPSCAEHFLTTFSPDEPDF*QRLMAS
Trigger: AGATGCCATCAGACGTTGGCAAAAGTCAGGCTCATC...AGGACTGAAAGTGGTGAGGAAGTGTTCTGCACAGGAAGGGTCCGGTGGGTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR GCA 90 bp GAAAACCCACCGGACCCTTCCTGTGCAGAACACTTCCTCACCACTTTCAGTCCTCAGCTTCATCGTGTTTaGTCTCAATGTGGACCTCCA +
Preference number: 4 (lower is better)
Translates to: ENPPDPSCAEHFLTTFSPQLHRV*SQCGPP
Trigger: TGGAGGTCCACATTGAGAGCAAACACGATGAAGCTG...AGGACTGAAAGTGGTGAGGAAGTGTTCTGCACAGGAAGGGTCCGGTGGGTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR GCA 90 bp TTCCTGTGCAGAACACTTCCTCACCACTTTCAGTCCTGGCCAGTTGCAAAATGGAACCCCTCTACTCTCTaGAGCAGCAATGGCCAGTAC +
Preference number: 4 (lower is better)
Translates to: FLCRTLPHHFQSWPVAKWNPSTL*SSNGQY
Trigger: GTACTGGCCATTGCTGCTGCAGAGAGTAGAGGGGTT...CCATTTTGCAACTGGCCAGGACTGAAAGTGGTGAGGAAGTGTTCTGCACAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CCA 90 bp CCTAGAAACTCTTACATGAATATTTTGGCTGTGGGCTGCCCAAGTCCCTCTGCTCTTCCCCAGGTCCACTaGAAAAGCTATCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: PRNSYMNILAVGCPSPSALPQVH*KSYPGP
Trigger: TGGGCCTGGATAGCTTTTCCAGTGGACCTGGGGAAG...AGCAGAGGGACTTGGGCAGCCCACAGCCAAAATATTCATGTAAGAGTTTCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR TCA 90 bp CAGCTATACATCACACACACATACACACATCATGTTATATGGAGGCTGTTCCACTGGGTCCACCTTGGCTaGATCCTGCGTGGGGATGTC +
Preference number: 4 (lower is better)
Translates to: QLYITHTYTHHVIWRLFHWVHLG*ILRGDV
Trigger: GACATCCCCACGCAGGATTCAGCCAAGGTGGACCCA...GTGGAACAGCCTCCATATAACATGATGTGTGTATGTGTGTGTGATGTATAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR TCA 90 bp TTCCTGTGCAGAACACTTCCTCACCACTTTCAGTCCTGGCCAGTTGCAAAATGGACAGATCTAGCGAGCTaGGGTTCAAATTGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: FLCRTLPHHFQSWPVAKWTDLAS*GSNWAF
Trigger: GAAGGCCCAATTTGAACCTCAGCTCGCTAGATCTGT...CCATTTTGCAACTGGCCAGGACTGAAAGTGGTGAGGAAGTGTTCTGCACAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR TCA 90 bp CCTAGAAACTCTTACATGAATATTTTGGCTGTGGGCTGCCCAAGTCCCTCTGCTCTGGGCTATGCAGCCTaGTCGCCAACAGCCTATATT +
Preference number: 4 (lower is better)
Translates to: PRNSYMNILAVGCPSPSALGYAA*SPTAYI
Trigger: AATATAGGCTGTTGGCGATCAGGCTGCATAGCCCAG...AGCAGAGGGACTTGGGCAGCCCACAGCCAAAATATTCATGTAAGAGTTTCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR GCA 90 bp CCTAGAAACTCTTACATGAATATTTTGGCTGTGGGCTGCCCAAGTCCCTCTGCTGGGTGTGAGATGCTCTaGCAGGGGGTAGTTACAAAC +
Preference number: 4 (lower is better)
Translates to: PRNSYMNILAVGCPSPSAGCEML*QGVVTN
Trigger: GTTTGTAACTACCCCCTGGCAGAGCATCTCACACCC...AGCAGAGGGACTTGGGCAGCCCACAGCCAAAATATTCATGTAAGAGTTTCTAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR GCA 90 bp GCTCTGGTTCCTCCTGCACAAAGCCCAGAATATGCTTGCCAGGTAGAGGGAAATTTTCTTCTGTTTTCCTaGCTTGACCAGGAGTTGCCC +
Preference number: 4 (lower is better)
Translates to: ALVPPAQSPEYACQVEGNFLLFS*LDQELP
Trigger: GGGCAACTCCTGGTCAAGGCAGGAAAACAGAAGAAA...ATTTCCCTCTACCTGGCAAGCATATTCTGGGCTTTGTGCAGGAGGAACCAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CCA 90 bp GCTCTGGTTCCTCCTGCACAAAGCCCAGAATATGCTTGCCAGGTAGAGGGAAATTCTCCCACTCACTGTTaGTTCCATATATCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: ALVPPAQSPEYACQVEGNSPTHC*FHISPQ
Trigger: CTGGGGAGATATATGGAACCAACAGTGAGTGGGAGA...ATTTCCCTCTACCTGGCAAGCATATTCTGGGCTTTGTGCAGGAGGAACCAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CCA 90 bp AGCCCGGAGCCAGCAGCGCACACAGTGGAAAGCAGGGCTGGCACATCCTTAACACCTCTTAAGTCCATTTaGTTTCTGTATCAATTAACC +
Preference number: 4 (lower is better)
Translates to: SPEPAAHTVESRAGTSLTPLKSI*FLYQLT
Trigger: GGTTAATTGATACAGAAACCAAATGGACTTAAGAGG...TGTTAAGGATGTGCCAGCCCTGCTTTCCACTGTGTGCGCTGCTGGCTCCGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CCA 90 bp GCCAGGAAAACCCACCGGACCCTTCCTGTGCAGAACACTTCCTCACCACTTTCATGGCCAGTTGCAAAATaGGAAGATGGTAAGATGAGA +
Preference number: 4 (lower is better)
Translates to: ARKTHRTLPVQNTSSPLSWPVAK*EDGKMR
Trigger: TCTCATCTTACCATCTTCCCATTTTGCAACTGGCCA...TGAAAGTGGTGAGGAAGTGTTCTGCACAGGAAGGGTCCGGTGGGTTTTCCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CCA 90 bp GCTCTGGTTCCTCCTGCACAAAGCCCAGAATATGCTTGCCAGGTAGAGGGAAATCCAGGTAGAGGGAAATaGTTAGGGGTTAAGACTGGA +
Preference number: 4 (lower is better)
Translates to: ALVPPAQSPEYACQVEGNPGRGK*LGVKTG
Trigger: TCCAGTCTTAACCCCTAACCATTTCCCTCTACCTGG...ATTTCCCTCTACCTGGCAAGCATATTCTGGGCTTTGTGCAGGAGGAACCAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CCA 90 bp TTCCTGTGCAGAACACTTCCTCACCACTTTCAGTCCTGGCCAGTTGCAAAATGGCCTGCCTGGAGATGCTaGAACAGTTTGGAAACTGCT +
Preference number: 4 (lower is better)
Translates to: FLCRTLPHHFQSWPVAKWPAWRC*NSLETA
Trigger: AGCAGTTTCCAAACTGTTCCAGCATCTCCAGGCAGG...CCATTTTGCAACTGGCCAGGACTGAAAGTGGTGAGGAAGTGTTCTGCACAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CCA 90 bp GCTCTGGTTCCTCCTGCACAAAGCCCAGAATATGCTTGCCAGGTAGAGGGAAATACATCTCTGAATTTCTaGGTCAGTGACGGCAACAGG +
Preference number: 4 (lower is better)
Translates to: ALVPPAQSPEYACQVEGNTSLNF*VSDGNR
Trigger: CCTGTTGCCGTCACTGACCCAGAAATTCAGAGATGT...ATTTCCCTCTACCTGGCAAGCATATTCTGGGCTTTGTGCAGGAGGAACCAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR GCA 90 bp TTCCTGTGCAGAACACTTCCTCACCACTTTCAGTCCTGGCCAGTTGCAAAATGGGTGAGCTTGCAGAACTaGAAAGGGTTGAGAATGACC +
Preference number: 4 (lower is better)
Translates to: FLCRTLPHHFQSWPVAKWVSLQN*KGLRMT
Trigger: GGTCATTCTCAACCCTTTGCAGTTCTGCAAGCTCAC...CCATTTTGCAACTGGCCAGGACTGAAAGTGGTGAGGAAGTGTTCTGCACAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CCA 90 bp GCTCTGGTTCCTCCTGCACAAAGCCCAGAATATGCTTGCCAGGTAGAGGGAAATTCATCCTTCATGCTCTaGAGCAGTGTGTTAAAGTCG +
Preference number: 4 (lower is better)
Translates to: ALVPPAQSPEYACQVEGNSSFML*SSVLKS
Trigger: CGACTTTAACACACTGCTCCAGAGCATGAAGGATGA...ATTTCCCTCTACCTGGCAAGCATATTCTGGGCTTTGTGCAGGAGGAACCAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CCA 90 bp CATCTGAGGATAGCCTCTGAGGATAACATCAATATCCTCTTCCCTTTCTCCCTTCTAGCCGTCCACTGCTaGCATCCTCAGCTTCATCGT +
Preference number: 4 (lower is better)
Translates to: HLRIASEDNINILFPFSLLAVHC*HPQLHR
Trigger: ACGATGAAGCTGAGGATGCCAGCAGTGGACGGCTAG...AAGGGAGAAAGGGAAGAGGATATTGATGTTATCCTCAGAGGCTATCCTCAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CCA 90 bp TTCCTGTGCAGAACACTTCCTCACCACTTTCAGTCCTGGCCAGTTGCAAAATGGCACCACTTTCAGTCCTaGCCAGTTGCAAAATGGGAA +
Preference number: 4 (lower is better)
Translates to: FLCRTLPHHFQSWPVAKWHHFQS*PVAKWE
Trigger: TTCCCATTTTGCAACTGGCCAGGACTGAAAGTGGTG...CCATTTTGCAACTGGCCAGGACTGAAAGTGGTGAGGAAGTGTTCTGCACAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CCA 90 bp CCTAGAAACTCTTACATGAATATTTTGGCTGTGGGCTGCCCAAGTCCCTCTGCTGGCTTTTTCTCCCCCTaGATTGCTGGTTGTAAGGGT +
Preference number: 4 (lower is better)
Translates to: PRNSYMNILAVGCPSPSAGFFSP*IAGCKG
Trigger: ACCCTTACAACCAGCAATCCAGGGGGAGAAAAAGCC...AGCAGAGGGACTTGGGCAGCCCACAGCCAAAATATTCATGTAAGAGTTTCTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR TCA 90 bp CATCTGAGGATAGCCTCTGAGGATAACATCAATATCCTCTTCCCTTTCTCCCTTCTTTGGCGTTCCTTCTaGTTCGGGCAGTGGAGTCAT +
Preference number: 4 (lower is better)
Translates to: HLRIASEDNINILFPFSLLWRSF*FGQWSH
Trigger: ATGACTCCACTGCCCGAATCAGAAGGAACGCCAAAG...AAGGGAGAAAGGGAAGAGGATATTGATGTTATCCTCAGAGGCTATCCTCAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR TCA 90 bp GCTCTGGTTCCTCCTGCACAAAGCCCAGAATATGCTTGCCAGGTAGAGGGAAATAGCATCTCCGTTTACTaGGTAGCAATCACATTCTCT +
Preference number: 4 (lower is better)
Translates to: ALVPPAQSPEYACQVEGNSISVY*VAITFS
Trigger: AGAGAATGTGATTGCTACTCAGTAAACGGAGATGCT...ATTTCCCTCTACCTGGCAAGCATATTCTGGGCTTTGTGCAGGAGGAACCAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR GCA 90 bp TTCCTGTGCAGAACACTTCCTCACCACTTTCAGTCCTGGCCAGTTGCAAAATGGAAGTCGACACCGTCTTaGTCTGAGAAAACATCACCA +
Preference number: 4 (lower is better)
Translates to: FLCRTLPHHFQSWPVAKWKSTPS*SEKTSP
Trigger: TGGTGATGTTTTCTCAGAGCAAGACGGTGTCGACTT...CCATTTTGCAACTGGCCAGGACTGAAAGTGGTGAGGAAGTGTTCTGCACAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR GCA 90 bp CAGCTATACATCACACACACATACACACATCATGTTATATGGAGGCTGTTCCACACCTTGGCTGAATCCTaGGTGGGGATGTCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: QLYITHTYTHHVIWRLFHTLAES*VGMSER
Trigger: CCTCTCTGACATCCCCACGCAGGATTCAGCCAAGGT...GTGGAACAGCCTCCATATAACATGATGTGTGTATGTGTGTGTGATGTATAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR GCA 90 bp GTGGTTATTCAAAGCCAGCTATACATCACACACACATACACACATCATGTTATACTGGAGGCTGCCACCTaGCAGGAAAACCCACCGGAC +
Preference number: 4 (lower is better)
Translates to: VVIQSQLYITHTYTHHVILEAAT*QENPPD
Trigger: GTCCGGTGGGTTTTCCTGGCAGGTGGCAGCCTCCAG...TATAACATGATGTGTGTATGTGTGTGTGATGTATAGCTGGCTTTGAATAACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR GCA 90 bp GAAAACCCACCGGACCCTTCCTGTGCAGAACACTTCCTCACCACTTTCAGTCCTGACAAATATTTCACATaGAGAAACACCCCTGTGTAC +
Preference number: 4 (lower is better)
Translates to: ENPPDPSCAEHFLTTFSPDKYFT*RNTPVY
Trigger: GTACACAGGGGTGTTTCTGCATGTGAAATATTTGTC...AGGACTGAAAGTGGTGAGGAAGTGTTCTGCACAGGAAGGGTCCGGTGGGTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CCA 90 bp GAAAACCCACCGGACCCTTCCTGTGCAGAACACTTCCTCACCACTTTCAGTCCTGGGTTATGCTTATTCTaGGCACTGGTATCTATTTCT +
Preference number: 4 (lower is better)
Translates to: ENPPDPSCAEHFLTTFSPGLCLF*ALVSIS
Trigger: AGAAATAGATACCAGTGCCCAGAATAAGCATAACCC...AGGACTGAAAGTGGTGAGGAAGTGTTCTGCACAGGAAGGGTCCGGTGGGTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CCA 90 bp TTCCTGTGCAGAACACTTCCTCACCACTTTCAGTCCTGGCCAGTTGCAAAATGGCAAGTTGTCCAGCTCTaGAAGTTGCTCATGGGAAAT +
Preference number: 4 (lower is better)
Translates to: FLCRTLPHHFQSWPVAKWQVVQL*KLLMGN
Trigger: ATTTCCCATGAGCAACTTCCAGAGCTGGACAACTTG...CCATTTTGCAACTGGCCAGGACTGAAAGTGGTGAGGAAGTGTTCTGCACAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CCA 90 bp CCTAGAAACTCTTACATGAATATTTTGGCTGTGGGCTGCCCAAGTCCCTCTGCTGCACACAGCAGGCTTTaGAAGCTTTCTGGGAATTCT +
Preference number: 4 (lower is better)
Translates to: PRNSYMNILAVGCPSPSAAHSRL*KLSGNS
Trigger: AGAATTCCCAGAAAGCTTCCAAAGCCTGCTGTGTGC...AGCAGAGGGACTTGGGCAGCCCACAGCCAAAATATTCATGTAAGAGTTTCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR TCA 90 bp AATAGTGGGAAGCCTAGAAACTCTTACATGAATATTTTGGCTGTGGGCTGCCCACTCTTCCATGAGCAATaGATTCCCCAGGATTCACCC +
Preference number: 4 (lower is better)
Translates to: NSGKPRNSYMNILAVGCPLFHEQ*IPQDSP
Trigger: GGGTGAATCCTGGGGAATTCATTGCTCATGGAAGAG...TGGGCAGCCCACAGCCAAAATATTCATGTAAGAGTTTCTAGGCTTCCCACTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR TCA 90 bp AATAGTGGGAAGCCTAGAAACTCTTACATGAATATTTTGGCTGTGGGCTGCCCAGTGTACCATGGAGTATaGAGGATGCACCACGTTCCA +
Preference number: 4 (lower is better)
Translates to: NSGKPRNSYMNILAVGCPVYHGV*RMHHVP
Trigger: TGGAACGTGGTGCATCCTTCATACTCCATGGTACAC...TGGGCAGCCCACAGCCAAAATATTCATGTAAGAGTTTCTAGGCTTCCCACTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR GCA 90 bp CTTGACTTAAATCCTACTCAGAGAAGAGGTAACAGAGAACATACCATTGGCCTTACCGGACCCTTCCTGTaGAGAACACTTCCTCACCAC +
Preference number: 4 (lower is better)
Translates to: LDLNPTQRRGNREHTIGLTGPFL*RTLPHH
Trigger: GTGGTGAGGAAGTGTTCTGCACAGGAAGGGTCCGGT...AAGGCCAATGGTATGTTCTCTGTTACCTCTTCTCTGAGTAGGATTTAAGTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR GCA 90 bp CAGCTATACATCACACACACATACACACATCATGTTATATGGAGGCTGTTCCACACCATCCATGTTCCCTaGCTGGAGATGCTGGAACAG +
Preference number: 4 (lower is better)
Translates to: QLYITHTYTHHVIWRLFHTIHVP*LEMLEQ
Trigger: CTGTTCCAGCATCTCCAGGCAGGGAACATGGATGGT...GTGGAACAGCCTCCATATAACATGATGTGTGTATGTGTGTGTGATGTATAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR GCA 90 bp CTTGACTTAAATCCTACTCAGAGAAGAGGTAACAGAGAACATACCATTGGCCTTTCCAATGTCCATGAATaGTCAGTAGGCGGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: LDLNPTQRRGNREHTIGLSNVHE*SVGGRW
Trigger: CCAGCGCCCGCCTACTGAGCATTCATGGACATTGGA...AAGGCCAATGGTATGTTCTCTGTTACCTCTTCTCTGAGTAGGATTTAAGTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CCA 90 bp CAGCTATACATCACACACACATACACACATCATGTTATATGGAGGCTGTTCCACTGTTTGCTCTCAATGTaGACCTCCAGCTGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: QLYITHTYTHHVIWRLFHCLLSM*TSSWWV
Trigger: CACCCACCAGCTGGAGGTCCACATTGAGAGCAAACA...GTGGAACAGCCTCCATATAACATGATGTGTGTATGTGTGTGTGATGTATAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CCA 90 bp TTCCTGTGCAGAACACTTCCTCACCACTTTCAGTCCTGGCCAGTTGCAAAATGGGATCTGACAATATTCTaGCTTCCTGTCAATGCAGGA +
Preference number: 4 (lower is better)
Translates to: FLCRTLPHHFQSWPVAKWDLTIF*LPVNAG
Trigger: TCCTGCATTGACAGGAAGCCAGAATATTGTCAGATC...CCATTTTGCAACTGGCCAGGACTGAAAGTGGTGAGGAAGTGTTCTGCACAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR CAA 72 bp GTCATACCAGCATTTCCTCTTGCACCATATGTGAGCTaGCAGAACTGCAAAGGGTTGAGAATGACCCACAGT +
Preference number: 4 (lower is better)
Translates to: VIPAFPLAPYVS*QNCKGLRMTHS
Trigger: ACTGTGGGTCATTCTCAACCCTTTGCAGTTCTGCAAGCTCACATATGGTGCAAGAGGAAATGCTGGTATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR TCA 90 bp AATAGTGGGAAGCCTAGAAACTCTTACATGAATATTTTGGCTGTGGGCTGCCCAGAGCGTTTGCAGCATTaGAATCCACAAATCAGGGCT +
Preference number: 4 (lower is better)
Translates to: NSGKPRNSYMNILAVGCPERLQH*NPQIRA
Trigger: AGCCCTGATTTGTGGATTTCAATGCTGCAAACGCTC...TGGGCAGCCCACAGCCAAAATATTCATGTAAGAGTTTCTAGGCTTCCCACTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR TCA 90 bp CATCTGAGGATAGCCTCTGAGGATAACATCAATATCCTCTTCCCTTTCTCCCTTTCGGCACTTTGGGGCTaGCTCTTTTGGAAATCACTA +
Preference number: 4 (lower is better)
Translates to: HLRIASEDNINILFPFSLSALWG*LFWKSL
Trigger: TAGTGATTTCCAAAAGAGTCAGCCCCAAAGTGCCGA...AAGGGAGAAAGGGAAGAGGATATTGATGTTATCCTCAGAGGCTATCCTCAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR GCA 90 bp ATACACACATCATGTTATATGGAGGCTGTTCCACAAATAGTGATTCTGAGTTGCGCCTTGACCAGGAGTTaGCCTCTGGAGCACATTGGT +
Preference number: 4 (lower is better)
Translates to: IHTSCYMEAVPQIVILSCALTRS*PLEHIG
Trigger: ACCAATGTGCTCCAGAGGGCAACTCCTGGTCAAGGC...GCAACTCAGAATCACTATTTGTGGAACAGCCTCCATATAACATGATGTGTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR GCA 90 bp TTCCTGTGCAGAACACTTCCTCACCACTTTCAGTCCTGGCCAGTTGCAAAATGGCAGGAACAGATTTCATaGTGGTTTCTTCTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: FLCRTLPHHFQSWPVAKWQEQIS*WFLLFS
Trigger: GGAAAACAGAAGAAACCAGCATGAAATCTGTTCCTG...CCATTTTGCAACTGGCCAGGACTGAAAGTGGTGAGGAAGTGTTCTGCACAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR GCA 90 bp AATAGTGGGAAGCCTAGAAACTCTTACATGAATATTTTGGCTGTGGGCTGCCCATTCCAGTTCACAGCATaGATCATGAAGGCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: NSGKPRNSYMNILAVGCPFQFTA*IMKARE
Trigger: TTCCCTGGCCTTCATGATGCATGCTGTGAACTGGAA...TGGGCAGCCCACAGCCAAAATATTCATGTAAGAGTTTCTAGGCTTCCCACTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR GCA 90 bp AATAGTGGGAAGCCTAGAAACTCTTACATGAATATTTTGGCTGTGGGCTGCCCAGAACAGTTTGGAAACTaGTCTGCTCTGCTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: NSGKPRNSYMNILAVGCPEQFGN*SALLWF
Trigger: GAACCAGAGCAGAGCAGAGCAGTTTCCAAACTGTTC...TGGGCAGCCCACAGCCAAAATATTCATGTAAGAGTTTCTAGGCTTCCCACTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CCA 90 bp TGGTTATTCAAAGCCAGCTATACATCACACACACATACACACATCATGTTATATCTGGTGGGTCCACCTTaGCTGAATCCTGCGTGGGGA +
Preference number: 4 (lower is better)
Translates to: WLFKASYTSHTHTHIMLYLVGPP*LNPAWG
Trigger: TCCCCACGCAGGATTCAGCCAAGGTGGACCCACCAG...ATATAACATGATGTGTGTATGTGTGTGTGATGTATAGCTGGCTTTGAATAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR CAA 72 bp CTTGCACCATATGTGAGCTTGCAGAACTGCAAAGGGTaGAGAATGACCCACAGTGACTCTGAAAAGATCTAC +
Preference number: 4 (lower is better)
Translates to: LAPYVSLQNCKG*RMTHSDSEKIY
Trigger: GTAGATCTTTTCAGAGTCACTGTGGGTCATTCTCAACCCTTTGCAGTTCTGCAAGCTCACATATGGTGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR TCA 90 bp CATCTGAGGATAGCCTCTGAGGATAACATCAATATCCTCTTCCCTTTCTCCCTTTTCAGGCTTGGCTTTTaGGTCATTTGCTTGTGTGTC +
Preference number: 4 (lower is better)
Translates to: HLRIASEDNINILFPFSLFRLGF*VICLCV
Trigger: GACACACAAGCAAATGACTCAAAAGCCAAGCCTGAA...AAGGGAGAAAGGGAAGAGGATATTGATGTTATCCTCAGAGGCTATCCTCAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CCA 90 bp CATCTGAGGATAGCCTCTGAGGATAACATCAATATCCTCTTCCCTTTCTCCCTTTGGGAATTCTTGAGGTaGACCAAGGCCTGGATAATT +
Preference number: 4 (lower is better)
Translates to: HLRIASEDNINILFPFSLWEFLR*TKAWII
Trigger: AATTATCCAGGCCTTGGTCCACCTCAAGAATTCCCA...AAGGGAGAAAGGGAAGAGGATATTGATGTTATCCTCAGAGGCTATCCTCAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CCA 90 bp AAGGGTTTTACCAGCACACCACTGTCATATGTATTAGACATAAAGAAAATTTGCCAGCAGCGCACACAGTaGAAAGCAGGGCTGGCACAT +
Preference number: 4 (lower is better)
Translates to: KGFTSTPLSYVLDIKKICQQRTQ*KAGLAH
Trigger: ATGTGCCAGCCCTGCTTTCCACTGTGTGCGCTGCTG...GCAAATTTTCTTTATGTCTAATACATATGACAGTGGTGTGCTGGTAAAACCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR CAA 72 bp CCAGCAGACAACAGATCTAGCGAGCTGAGGTTCAAATaGGGCCTTCTTCAAAATAGTTTTCCTTGCCTCTAT +
Preference number: 4 (lower is better)
Translates to: PADNRSSELRFK*GLLQNSFPCLY
Trigger: ATAGAGGCAAGGAAAACTATTTTGAAGAAGGCCCAATTTGAACCTCAGCTCGCTAGATCTGTTGTCTGCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR TCA 90 bp CTTGACTTAAATCCTACTCAGAGAAGAGGTAACAGAGAACATACCATTGGCCTTGACCAATCACATCTCTaGATTTCTGGGTCAGTGACG +
Preference number: 4 (lower is better)
Translates to: LDLNPTQRRGNREHTIGLDQSHL*ISGSVT
Trigger: CGTCACTGACCCAGAAATTCAGAGATGTGATTGGTC...AAGGCCAATGGTATGTTCTCTGTTACCTCTTCTCTGAGTAGGATTTAAGTCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CCA 90 bp CTTGACTTAAATCCTACTCAGAGAAGAGGTAACAGAGAACATACCATTGGCCTTAGGTGGACCAAGGCCTaGATAATTGCATGCTTTGTG +
Preference number: 4 (lower is better)
Translates to: LDLNPTQRRGNREHTIGLRWTKA*IIACFV
Trigger: CACAAAGCATGCAATTATCCAGGCCTTGGTCCACCT...AAGGCCAATGGTATGTTCTCTGTTACCTCTTCTCTGAGTAGGATTTAAGTCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CCA 90 bp CAGCTATACATCACACACACATACACACATCATGTTATATGGAGGCTGTTCCACGATTCGGTGTGTCTGTaGTGTTCGCTGATTTCCAAT +
Preference number: 4 (lower is better)
Translates to: QLYITHTYTHHVIWRLFHDSVCL*CSLISN
Trigger: ATTGGAAATCAGCGAACACCACAGACACACCGAATC...GTGGAACAGCCTCCATATAACATGATGTGTGTATGTGTGTGTGATGTATAGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR CAA 72 bp AGAGCTGACTTAGGTTTTAGAAGTTTTGCAAGCCAGTaGACATCACCTTGGCAGCTCAAGATAGACCATGTA +
Preference number: 4 (lower is better)
Translates to: RADLGFRSFASQ*TSPWQLKIDHV
Trigger: TACATGGTCTATCTTGAGCTGCCAAGGTGATGTCAACTGGCTTGCAAAACTTCTAAAACCTAAGTCAGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
3UTR CAA 72 bp AATAGTGGGAAGCCTAGAAACTCTTACATGAATATTTaGGCTGTGGGCTGCCCAAGTCCCTCTGCTATAATT +
Preference number: 4 (lower is better)
Translates to: NSGKPRNSYMNI*AVGCPSPSAII
Trigger: AATTATAGCAGAGGGACTTGGGCAGCCCACAGCCAAAATATTCATGTAAGAGTTTCTAGGCTTCCCACTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR TCA 90 bp AATAGTGGGAAGCCTAGAAACTCTTACATGAATATTTTGGCTGTGGGCTGCCCAATGCATACATTTGAGTaGGTCATGCATGTAGATGAG +
Preference number: 4 (lower is better)
Translates to: NSGKPRNSYMNILAVGCPMHTFE*VMHVDE
Trigger: CTCATCTACATGCATGACTCACTCAAATGTATGCAT...TGGGCAGCCCACAGCCAAAATATTCATGTAAGAGTTTCTAGGCTTCCCACTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR TCA 90 bp AAGGGTTTTACCAGCACACCACTGTCATATGTATTAGACATAAAGAAAATTTGCGGAAAGCAGGGGTGCTaGGACAAGGGAACAGTGTTA +
Preference number: 4 (lower is better)
Translates to: KGFTSTPLSYVLDIKKICGKQGC*DKGTVL
Trigger: TAACACTGTTCCCTTGTCTCAGCACCCCTGCTTTCC...GCAAATTTTCTTTATGTCTAATACATATGACAGTGGTGTGCTGGTAAAACCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR TCA 90 bp AAGGGTTTTACCAGCACACCACTGTCATATGTATTAGACATAAAGAAAATTTGCGATTTCCAATGTCCATaGATGCTCAGTAGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: KGFTSTPLSYVLDIKKICDFQCP*MLSRRA
Trigger: CGCCCGCCTACTGAGCATTCATGGACATTGGAAATC...GCAAATTTTCTTTATGTCTAATACATATGACAGTGGTGTGCTGGTAAAACCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR GCA 90 bp AAGGGTTTTACCAGCACACCACTGTCATATGTATTAGACATAAAGAAAATTTGCGAAACAACTGGGCTATaGAGCCTGATCGCCAACAGC +
Preference number: 4 (lower is better)
Translates to: KGFTSTPLSYVLDIKKICETTGL*SLIANS
Trigger: GCTGTTGGCGATCAGGCTGCATAGCCCAGTTGTTTC...GCAAATTTTCTTTATGTCTAATACATATGACAGTGGTGTGCTGGTAAAACCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR GCA 90 bp CATCTGAGGATAGCCTCTGAGGATAACATCAATATCCTCTTCCCTTTCTCCCTTTGCTCACAAAACCAGTaGCCATGTGTGATAAAAACA +
Preference number: 4 (lower is better)
Translates to: HLRIASEDNINILFPFSLCSQNQ*PCVIKT
Trigger: TGTTTTTATCACACATGGGCACTGGTTTTGTGAGCA...AAGGGAGAAAGGGAAGAGGATATTGATGTTATCCTCAGAGGCTATCCTCAGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CCA 90 bp CCTAGAAACTCTTACATGAATATTTTGGCTGTGGGCTGCCCAAGTCCCTCTGCTTTCAAAATTCAGGCTTaGCTTTTGAGTCATTTGCTT +
Preference number: 4 (lower is better)
Translates to: PRNSYMNILAVGCPSPSAFKIQA*LLSHLL
Trigger: AAGCAAATGACTCAAAAGCCAAGCCTGAATTTTGAA...AGCAGAGGGACTTGGGCAGCCCACAGCCAAAATATTCATGTAAGAGTTTCTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR TCA 90 bp CTTGACTTAAATCCTACTCAGAGAAGAGGTAACAGAGAACATACCATTGGCCTTCAGTGGAGTCATAGATaGTGTTTGATCTCATCTGCA +
Preference number: 4 (lower is better)
Translates to: LDLNPTQRRGNREHTIGLQWSHR*CLISSA
Trigger: TGCAGATGAGATCAAACATCATCTATGACTCCACTG...AAGGCCAATGGTATGTTCTCTGTTACCTCTTCTCTGAGTAGGATTTAAGTCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR GCA 90 bp CTTGACTTAAATCCTACTCAGAGAAGAGGTAACAGAGAACATACCATTGGCCTTGGAGGTCCGATCTGTTaGAAATTTGTTGTAGAGTTC +
Preference number: 4 (lower is better)
Translates to: LDLNPTQRRGNREHTIGLGGPIC*KFVVEF
Trigger: GAACTCTACAACAAATTTGCAACAGATCGGACCTCC...AAGGCCAATGGTATGTTCTCTGTTACCTCTTCTCTGAGTAGGATTTAAGTCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR GCA 90 bp GTGGTTATTCAAAGCCAGCTATACATCACACACACATACACACATCATGTTATAGCCTGGATAATTGCATaGTTTGTGGGTGTGAGATGC +
Preference number: 4 (lower is better)
Translates to: VVIQSQLYITHTYTHHVIAWIIA*FVGVRC
Trigger: GCATCTCACACCCACAAAGCATGCAATTATCCAGGC...TATAACATGATGTGTGTATGTGTGTGTGATGTATAGCTGGCTTTGAATAACCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR GCA 90 bp ATACACACATCATGTTATATGGAGGCTGTTCCACAAATAGTGATTCTGAGTTGCCAGTACTCATGGCCTTaGTTTCCTATTGTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: IHTSCYMEAVPQIVILSCQYSWP*FPIVSG
Trigger: TCCTGAGACAATAGGAAAGCAAGGCCATGAGTACTG...GCAACTCAGAATCACTATTTGTGGAACAGCCTCCATATAACATGATGTGTGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR GCA 90 bp AATAGTGGGAAGCCTAGAAACTCTTACATGAATATTTTGGCTGTGGGCTGCCCAATAGTGATTCTGAGTTaGATGGCTTTCTCAAAGCAT +
Preference number: 4 (lower is better)
Translates to: NSGKPRNSYMNILAVGCPIVILS*MAFSKH
Trigger: ATGCTTTGAGAAAGCCATGCAACTCAGAATCACTAT...TGGGCAGCCCACAGCCAAAATATTCATGTAAGAGTTTCTAGGCTTCCCACTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR GCA 90 bp GTGGTTATTCAAAGCCAGCTATACATCACACACACATACACACATCATGTTATACAATATGTTGCTCTCTaGACTCCCTTTCCACAGGGA +
Preference number: 4 (lower is better)
Translates to: VVIQSQLYITHTYTHHVIQYVAL*TPFPQG
Trigger: TCCCTGTGGAAAGGGAGTGCAGAGAGCAACATATTG...TATAACATGATGTGTGTATGTGTGTGTGATGTATAGCTGGCTTTGAATAACCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR GCA 90 bp GATGTCAATTATCTTGACTTAAATCCTACTCAGAGAAGAGGTAACAGAGAACATCACTATCAAGCCAGGTaGTCACAAAACCAGTGCCCA +
Preference number: 4 (lower is better)
Translates to: DVNYLDLNPTQRRGNREHHYQAR*SQNQCP
Trigger: TGGGCACTGGTTTTGTGAGCACCTGGCTTGATAGTG...ATGTTCTCTGTTACCTCTTCTCTGAGTAGGATTTAAGTCAAGATAATTGACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CCA 90 bp CAGCTATACATCACACACACATACACACATCATGTTATATGGAGGCTGTTCCACTTAAAACTGACCGGCTaGGAAAACAGATCTTCATTC +
Preference number: 4 (lower is better)
Translates to: QLYITHTYTHHVIWRLFHLKLTG*ENRSSF
Trigger: GAATGAAGATCTGTTTTCCCAGCCGGTCAGTTTTAA...GTGGAACAGCCTCCATATAACATGATGTGTGTATGTGTGTGTGATGTATAGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CCA 90 bp AAGGGTTTTACCAGCACACCACTGTCATATGTATTAGACATAAAGAAAATTTGCCCCTCTGGAGCACATTaGTCCTCCATGGGTTCATTT +
Preference number: 4 (lower is better)
Translates to: KGFTSTPLSYVLDIKKICPSGAH*SSMGSF
Trigger: AAATGAACCCATGGAGGACCAATGTGCTCCAGAGGG...GCAAATTTTCTTTATGTCTAATACATATGACAGTGGTGTGCTGGTAAAACCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR TCA 90 bp CTTGACTTAAATCCTACTCAGAGAAGAGGTAACAGAGAACATACCATTGGCCTTCATCAGAAAACACGATaGGCAAAGGGTTATGCTTAT +
Preference number: 4 (lower is better)
Translates to: LDLNPTQRRGNREHTIGLHQKTR*AKGYAY
Trigger: ATAAGCATAACCCTTTGCTCATCGTGTTTTCTGATG...AAGGCCAATGGTATGTTCTCTGTTACCTCTTCTCTGAGTAGGATTTAAGTCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR TCA 90 bp TGGTTATTCAAAGCCAGCTATACATCACACACACATACACACATCATGTTATATAAGCATTCCTTAAGATaGGTAGGGGTGAATGGGGGA +
Preference number: 4 (lower is better)
Translates to: WLFKASYTSHTHTHIMLYKHSLR*VGVNGG
Trigger: TCCCCCATTCACCCCTACTCATCTTAAGGAATGCTT...ATATAACATGATGTGTGTATGTGTGTGTGATGTATAGCTGGCTTTGAATAACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR TCA 90 bp CTTGACTTAAATCCTACTCAGAGAAGAGGTAACAGAGAACATACCATTGGCCTTTATCAAGTAGAAACATaGAAAAGTGGGGAGTGTGCA +
Preference number: 4 (lower is better)
Translates to: LDLNPTQRRGNREHTIGLYQVET*KSGECA
Trigger: TGCACACTCCCCACTTTTTCATGTTTCTACTTGATA...AAGGCCAATGGTATGTTCTCTGTTACCTCTTCTCTGAGTAGGATTTAAGTCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR GCA 90 bp TGGTTATTCAAAGCCAGCTATACATCACACACACATACACACATCATGTTATATAGAAACCAAGTAAGCTaGCAGGCAGAAAAGAGCGCA +
Preference number: 4 (lower is better)
Translates to: WLFKASYTSHTHTHIMLYRNQVS*QAEKSA
Trigger: TGCGCTCTTTTCTGCCTGGCAGCTTACTTGGTTTCT...ATATAACATGATGTGTGTATGTGTGTGTGATGTATAGCTGGCTTTGAATAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR GCA 90 bp ATACACACATCATGTTATATGGAGGCTGTTCCACAAATAGTGATTCTGAGTTGCATGAGCAAAGGGTTATaGTTATTCTGGGCACTGGTA +
Preference number: 4 (lower is better)
Translates to: IHTSCYMEAVPQIVILSCMSKGL*LFWALV
Trigger: TACCAGTGCCCAGAATAAGCATAACCCTTTGCTCAT...GCAACTCAGAATCACTATTTGTGGAACAGCCTCCATATAACATGATGTGTGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR GCA 90 bp ATACACACATCATGTTATATGGAGGCTGTTCCACAAATAGTGATTCTGAGTTGCTCCTCTCCTTGTCACTaGTTTGGTCATCAGAAAACA +
Preference number: 4 (lower is better)
Translates to: IHTSCYMEAVPQIVILSCSSPCH*FGHQKT
Trigger: TGTTTTCTGATGACCAAAGCAGTGACAAGGAGAGGA...GCAACTCAGAATCACTATTTGTGGAACAGCCTCCATATAACATGATGTGTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR GCA 90 bp TGGTTATTCAAAGCCAGCTATACATCACACACACATACACACATCATGTTATATAGCCCAGAATATGCTTaGCAGGTAGAGGGAAATGGT +
Preference number: 4 (lower is better)
Translates to: WLFKASYTSHTHTHIMLYSPEYA*QVEGNG
Trigger: ACCATTTCCCTCTACCTGGCAAGCATATTCTGGGCT...ATATAACATGATGTGTGTATGTGTGTGTGATGTATAGCTGGCTTTGAATAACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR GCA 90 bp CTTGACTTAAATCCTACTCAGAGAAGAGGTAACAGAGAACATACCATTGGCCTTAAGAGTGACTATAAGTaGTCGAGACAAGATTTCTCC +
Preference number: 4 (lower is better)
Translates to: LDLNPTQRRGNREHTIGLKSDYK*SRQDFS
Trigger: GGAGAAATCTTGTCTCGAGCACTTATAGTCACTCTT...AAGGCCAATGGTATGTTCTCTGTTACCTCTTCTCTGAGTAGGATTTAAGTCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CCA 90 bp CAGCTATACATCACACACACATACACACATCATGTTATATGGAGGCTGTTCCACTCTGGAAGTTGCTCATaGGAAATCATTTCATTCAGT +
Preference number: 4 (lower is better)
Translates to: QLYITHTYTHHVIWRLFHSGSCS*EIISFS
Trigger: ACTGAATGAAATGATTTCCCATGAGCAACTTCCAGA...GTGGAACAGCCTCCATATAACATGATGTGTGTATGTGTGTGTGATGTATAGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CCA 90 bp AAGGGTTTTACCAGCACACCACTGTCATATGTATTAGACATAAAGAAAATTTGCAATAGAGGATGGAGATaGGCTCTAGCTTTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: KGFTSTPLSYVLDIKKICNRGWR*ALALWA
Trigger: TGCCCACAAAGCTAGAGCCCATCTCCATCCTCTATT...GCAAATTTTCTTTATGTCTAATACATATGACAGTGGTGTGCTGGTAAAACCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CCA 90 bp GATGTCAATTATCTTGACTTAAATCCTACTCAGAGAAGAGGTAACAGAGAACATATGAGTAGGGGTGAATaGGGGATGACGTACTGGAAA +
Preference number: 4 (lower is better)
Translates to: DVNYLDLNPTQRRGNREHMSRGE*GMTYWK
Trigger: TTTCCAGTACGTCATCCCCCATTCACCCCTACTCAT...ATGTTCTCTGTTACCTCTTCTCTGAGTAGGATTTAAGTCAAGATAATTGACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CCA 90 bp CTTGACTTAAATCCTACTCAGAGAAGAGGTAACAGAGAACATACCATTGGCCTTATACATTGTGTACCATaGAGTATGAAGGATGCACCA +
Preference number: 4 (lower is better)
Translates to: LDLNPTQRRGNREHTIGLIHCVP*SMKDAP
Trigger: TGGTGCATCCTTCATACTCCATGGTACACAATGTAT...AAGGCCAATGGTATGTTCTCTGTTACCTCTTCTCTGAGTAGGATTTAAGTCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR TCA 90 bp GATGTCAATTATCTTGACTTAAATCCTACTCAGAGAAGAGGTAACAGAGAACATATGACCTCTTCATGGTaGGGAATGGACACATTGAAG +
Preference number: 4 (lower is better)
Translates to: DVNYLDLNPTQRRGNREHMTSSW*GMDTLK
Trigger: CTTCAATGTGTCCATTCCTCACCATGAAGAGGTCAT...ATGTTCTCTGTTACCTCTTCTCTGAGTAGGATTTAAGTCAAGATAATTGACATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR TCA 90 bp TGGTTATTCAAAGCCAGCTATACATCACACACACATACACACATCATGTTATATGTCTGTGGTGTTCGCTaGTTTCCAATGTCCATGAAT +
Preference number: 4 (lower is better)
Translates to: WLFKASYTSHTHTHIMLYVCGVR*FPMSMN
Trigger: ATTCATGGACATTGGAAATCAGCGAACACCACAGAC...ATATAACATGATGTGTGTATGTGTGTGTGATGTATAGCTGGCTTTGAATAACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR TCA 90 bp GATGTCAATTATCTTGACTTAAATCCTACTCAGAGAAGAGGTAACAGAGAACATACTATCCTGGTCAGCTaGGGTTTTACTGTGTATGTA +
Preference number: 4 (lower is better)
Translates to: DVNYLDLNPTQRRGNREHTILVS*GFTVYV
Trigger: TACATACACAGTAAAACCTCAGCTGACCAGGATAGT...ATGTTCTCTGTTACCTCTTCTCTGAGTAGGATTTAAGTCAAGATAATTGACATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR TCA 90 bp AAGGGTTTTACCAGCACACCACTGTCATATGTATTAGACATAAAGAAAATTTGCCATTCTCTCACAGCCTaGCAATATTTGCTTCTCATG +
Preference number: 4 (lower is better)
Translates to: KGFTSTPLSYVLDIKKICHSLTA*QYLLLM
Trigger: CATGAGAAGCAAATATTGTCAGGCTGTGAGAGAATG...GCAAATTTTCTTTATGTCTAATACATATGACAGTGGTGTGCTGGTAAAACCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR GCA 90 bp AAGGGTTTTACCAGCACACCACTGTCATATGTATTAGACATAAAGAAAATTTGCCCTCATTATCCCCTTTaGTCTCCAGCACTTCAAAAA +
Preference number: 4 (lower is better)
Translates to: KGFTSTPLSYVLDIKKICPHYPL*SPALQK
Trigger: TTTTTGAAGTGCTGGAGAGCAAAGGGGATAATGAGG...GCAAATTTTCTTTATGTCTAATACATATGACAGTGGTGTGCTGGTAAAACCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR GCA 90 bp TGGTTATTCAAAGCCAGCTATACATCACACACACATACACACATCATGTTATATCTTGTAGGCACAGCATaGCTGCAAGACACAAATATA +
Preference number: 4 (lower is better)
Translates to: WLFKASYTSHTHTHIMLYLVGTA*LQDTNI
Trigger: TATATTTGTGTCTTGCAGGCATGCTGTGCCTACAAG...ATATAACATGATGTGTGTATGTGTGTGTGATGTATAGCTGGCTTTGAATAACCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CCA 90 bp TGGTTATTCAAAGCCAGCTATACATCACACACACATACACACATCATGTTATATTCCTTGTCACTGCTTTaGTCATCAGAAAACACGATG +
Preference number: 4 (lower is better)
Translates to: WLFKASYTSHTHTHIMLYSLSLL*SSENTM
Trigger: CATCGTGTTTTCTGATGACCAAAGCAGTGACAAGGA...ATATAACATGATGTGTGTATGTGTGTGTGATGTATAGCTGGCTTTGAATAACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR GCA 90 bp AAGGGTTTTACCAGCACACCACTGTCATATGTATTAGACATAAAGAAAATTTGCAAGTTAAAAAGGTTTTaGCAGAACACTGCTAGGCTT +
Preference number: 4 (lower is better)
Translates to: KGFTSTPLSYVLDIKKICKLKRF*QNTARL
Trigger: AAGCCTAGCAGTGTTCTGGCAAAACCTTTTTAACTT...GCAAATTTTCTTTATGTCTAATACATATGACAGTGGTGTGCTGGTAAAACCCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR GCA 90 bp TGGTTATTCAAAGCCAGCTATACATCACACACACATACACACATCATGTTATATCATTGGCCTTTAATATaGATACATTTGAGTGAGTCA +
Preference number: 4 (lower is better)
Translates to: WLFKASYTSHTHTHIMLYHWPLI*IHLSES
Trigger: TGACTCACTCAAATGTATGCATATTAAAGGCCAATG...ATATAACATGATGTGTGTATGTGTGTGTGATGTATAGCTGGCTTTGAATAACCA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CCA 90 bp AAGGGTTTTACCAGCACACCACTGTCATATGTATTAGACATAAAGAAAATTTGCCAGAGAACATACCATTaGCCTTTAATATGCATACAT +
Preference number: 4 (lower is better)
Translates to: KGFTSTPLSYVLDIKKICQRTYH*PLICIH
Trigger: ATGTATGCATATTAAAGGCCAATGGTATGTTCTCTG...GCAAATTTTCTTTATGTCTAATACATATGACAGTGGTGTGCTGGTAAAACCCTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CCA 90 bp GATGTCAATTATCTTGACTTAAATCCTACTCAGAGAAGAGGTAACAGAGAACATAATTATGGCAAGCTATaGCAAGATTCCTTAAACCAA +
Preference number: 4 (lower is better)
Translates to: DVNYLDLNPTQRRGNREHNYGKL*QDSLNQ
Trigger: TTGGTTTAAGGAATCTTGCCATAGCTTGCCATAATT...ATGTTCTCTGTTACCTCTTCTCTGAGTAGGATTTAAGTCAAGATAATTGACATC
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CAA 90 bp GGGCGCTGGCACATTGGCCGCCCCACCACTATCAAGCCAGGTGCTCACAAAACCTGCCTTGACCAGGAGTaGCCCTCTGGAGCACATTGG +
Preference number: 5 (lower is better)
Translates to: GRWHIGRPTTIKPGAHKTCLDQE*PSGAHW
Trigger: CCAATGTGCTCCAGAGGGCAACTCCTGGTCAAGGCA...GGTTTTGTGAGCACCTGGCTTGATAGTGGTGGGGCGGCCAATGTGCCAGCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CAA 90 bp CCCGGAGCCAGCAGCGCACACAGTGGAAAGCAGGGCTGGCACATCCTTAACATTGCTTTCTGGGAATTCTaGAGGTGGACCAAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: PGASSAHSGKQGWHILNIAFWEF*RWTKAW
Trigger: CCAGGCCTTGGTCCACCTCAAGAATTCCCAGAAAGC...AATGTTAAGGATGTGCCAGCCCTGCTTTCCACTGTGTGCGCTGCTGGCTCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CAA 90 bp GGGCGCTGGCACATTGGCCGCCCCACCACTATCAAGCCAGGTGCTCACAAAACCAGATGCTGGAACAGTTaGGAAACTGCTCTGCTCTGC +
Preference number: 5 (lower is better)
Translates to: GRWHIGRPTTIKPGAHKTRCWNS*ETALLC
Trigger: GCAGAGCAGAGCAGTTTCCAAACTGTTCCAGCATCT...GGTTTTGTGAGCACCTGGCTTGATAGTGGTGGGGCGGCCAATGTGCCAGCGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CAA 90 bp GCTCTGGTTCCTCCTGCACAAAGCCCAGAATATGCTTGCCAGGTAGAGGGAAATTCTGGTGGGTCCACCTaGGCTGAATCCTGCGTGGGG +
Preference number: 5 (lower is better)
Translates to: ALVPPAQSPEYACQVEGNSGGST*AESCVG
Trigger: CCCCACGCAGGATTCAGCCAAGGTGGACCCACCAGA...ATTTCCCTCTACCTGGCAAGCATATTCTGGGCTTTGTGCAGGAGGAACCAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CAA 90 bp GGGCGCTGGCACATTGGCCGCCCCACCACTATCAAGCCAGGTGCTCACAAAACCCCCTCATTATCCCCTTaGCTCTCCAGCACTTCAAAA +
Preference number: 5 (lower is better)
Translates to: GRWHIGRPTTIKPGAHKTPSLSP*LSSTSK
Trigger: TTTTGAAGTGCTGGAGAGCAAAGGGGATAATGAGGG...GGTTTTGTGAGCACCTGGCTTGATAGTGGTGGGGCGGCCAATGTGCCAGCGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CAA 90 bp TTTCTCCAGAAGCCCGGAGCCAGCAGCGCACACAGTGGAAAGCAGGGCTGGCACTTCAGTCCTGGCCAGTaGCAAAATGGGAAGATGGTA +
Preference number: 5 (lower is better)
Translates to: FLQKPGASSAHSGKQGWHFSPGQ*QNGKMV
Trigger: TACCATCTTCCCATTTTGCAACTGGCCAGGACTGAA...GTGCCAGCCCTGCTTTCCACTGTGTGCGCTGCTGGCTCCGGGCTTCTGGAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS GCA 90 bp CTATTTCTAGCCGTCCACTGCTGGCATCCTCAGCTTCATCGTGTTTaGTCTCAATGTGGACCTCCAGCTGGTGGGTGGATGAGCCTGACT +
Preference number: 5 (lower is better)
Translates to: LFLAVHCWHPQLHRV*SQCGPPAGGWMSLT
Trigger: AGTCAGGCTCATCCACCCACCAGCTGGAGGTCCACATTGAGAGCAAACACGATGAAGCTGAGGATGCCAGCAGTGGACGGCTAGAAATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CAA 90 bp GAAAACCCACCGGACCCTTCCTGTGCAGAACACTTCCTCACCACTTTCAGTCCTAACAGGGAGGTGGCATaGCCAGGAAATGGCAAGTCC +
Preference number: 5 (lower is better)
Translates to: ENPPDPSCAEHFLTTFSPNREVA*PGNGKS
Trigger: GGACTTGCCATTTCCTGGCAATGCCACCTCCCTGTT...AGGACTGAAAGTGGTGAGGAAGTGTTCTGCACAGGAAGGGTCCGGTGGGTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CAA 90 bp GCCAGGAAAACCCACCGGACCCTTCCTGTGCAGAACACTTCCTCACCACTTTCACTGTCAATGCAGGAGTaGAAAGTGACACCGGTGTGC +
Preference number: 5 (lower is better)
Translates to: ARKTHRTLPVQNTSSPLSLSMQE*KVTPVC
Trigger: GCACACCGGTGTCACTTTCAACTCCTGCATTGACAG...TGAAAGTGGTGAGGAAGTGTTCTGCACAGGAAGGGTCCGGTGGGTTTTCCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS CCA 90 bp TCCTCAGCTTCATCGTGTTTGCTCTCAATGTGGACCTCCAGCTGGTaGGTGGATGAGCCTGACTTTTGCCAACGTCTGATGGCATCTGTG +
Preference number: 5 (lower is better)
Translates to: SSASSCLLSMWTSSW*VDEPDFCQRLMASV
Trigger: CACAGATGCCATCAGACGTTGGCAAAAGTCAGGCTCATCCACCCACCAGCTGGAGGTCCACATTGAGAGCAAACACGATGAAGCTGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS CCA 90 bp GCATCCTCAGCTTCATCGTGTTTGCTCTCAATGTGGACCTCCAGCTaGTGGGTGGATGAGCCTGACTTTTGCCAACGTCTGATGGCATCT +
Preference number: 5 (lower is better)
Translates to: ASSASSCLLSMWTSS*WVDEPDFCQRLMAS
Trigger: AGATGCCATCAGACGTTGGCAAAAGTCAGGCTCATCCACCCACCAGCTGGAGGTCCACATTGAGAGCAAACACGATGAAGCTGAGGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS GCA 90 bp CTCTCAATGTGGACCTCCAGCTGGTGGGTGGATGAGCCTGACTTTTaGCAACGTCTGATGGCATCTGTGACATCAAAAGTCTCCCACTCA +
Preference number: 5 (lower is better)
Translates to: LSMWTSSWWVDEPDF*QRLMASVTSKVSHS
Trigger: TGAGTGGGAGACTTTTGATGTCACAGATGCCATCAGACGTTGGCAAAAGTCAGGCTCATCCACCCACCAGCTGGAGGTCCACATTGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CAA 90 bp GAAAACCCACCGGACCCTTCCTGTGCAGAACACTTCCTCACCACTTTCAGTCCTTCAGCTTCATCGTGTTaGCTCTCAATGTGGACCTCC +
Preference number: 5 (lower is better)
Translates to: ENPPDPSCAEHFLTTFSPSASSC*LSMWTS
Trigger: GGAGGTCCACATTGAGAGCAAACACGATGAAGCTGA...AGGACTGAAAGTGGTGAGGAAGTGTTCTGCACAGGAAGGGTCCGGTGGGTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CAA 90 bp TTTCTCCAGAAGCCCGGAGCCAGCAGCGCACACAGTGGAAAGCAGGGCTGGCACTTTCAAAATTCAGGCTaGGCTTTTGAGTCATTTGCT +
Preference number: 5 (lower is better)
Translates to: FLQKPGASSAHSGKQGWHFQNSG*AFESFA
Trigger: AGCAAATGACTCAAAAGCCAAGCCTGAATTTTGAAA...GTGCCAGCCCTGCTTTCCACTGTGTGCGCTGCTGGCTCCGGGCTTCTGGAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CAA 90 bp CTTGACTTAAATCCTACTCAGAGAAGAGGTAACAGAGAACATACCATTGGCCTTGCGGGCGCTGGCACATaGGCCGCCCCACCACTATCA +
Preference number: 5 (lower is better)
Translates to: LDLNPTQRRGNREHTIGLAGAGT*AAPPLS
Trigger: TGATAGTGGTGGGGCGGCCAATGTGCCAGCGCCCGC...AAGGCCAATGGTATGTTCTCTGTTACCTCTTCTCTGAGTAGGATTTAAGTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS GCA 90 bp GACCAAGGCCTGGATAATTGCATGCTTTGTGGGTGTGAGATGCTCTaGCAGGGGGTAGTTACAAACACCACGGCATTCATAGGCTTCGTA +
Preference number: 5 (lower is better)
Translates to: DQGLDNCMLCGCEML*QGVVTNTTAFIGFV
Trigger: TACGAAGCCTATGAATGCCGTGGTGTTTGTAACTACCCCCTGGCAGAGCATCTCACACCCACAAAGCATGCAATTATCCAGGCCTTGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS CCA 90 bp CCCAGGTCCACTGGAAAAGCTATCCAGGCCCAAGTTGTCCAGCTCTaGAAGTTGCTCATGGGAAATCATTTCATTCAGTTCCTCCTTCCT +
Preference number: 5 (lower is better)
Translates to: PRSTGKAIQAQVVQL*KLLMGNHFIQFLLP
Trigger: AGGAAGGAGGAACTGAATGAAATGATTTCCCATGAGCAACTTCCAGAGCTGGACAACTTGGGCCTGGATAGCTTTTCCAGTGGACCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CAA 90 bp TTCCTGTGCAGAACACTTCCTCACCACTTTCAGTCCTGGCCAGTTGCAAAATGGAAACTCCTAATGATGTaGGCAGAGGGCATGGAGGTC +
Preference number: 5 (lower is better)
Translates to: FLCRTLPHHFQSWPVAKWKLLMM*AEGMEV
Trigger: GACCTCCATGCCCTCTGCCAACATCATTAGGAGTTT...CCATTTTGCAACTGGCCAGGACTGAAAGTGGTGAGGAAGTGTTCTGCACAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CAA 90 bp CAGCTATACATCACACACACATACACACATCATGTTATATGGAGGCTGTTCCACCCCTTCAAGCATCCTTaGCCAGGCCCCTCCTCTCTG +
Preference number: 5 (lower is better)
Translates to: QLYITHTYTHHVIWRLFHPFKHP*PGPSSL
Trigger: CAGAGAGGAGGGGCCTGGCAAAGGATGCTTGAAGGG...GTGGAACAGCCTCCATATAACATGATGTGTGTATGTGTGTGTGATGTATAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS GCA 90 bp GGTTATGCTTATTCTGGGCACTGGTATCTATTTCTAGCCGTCCACTaGTGGCATCCTCAGCTTCATCGTGTTTGCTCTCAATGTGGACCT +
Preference number: 5 (lower is better)
Translates to: GYAYSGHWYLFLAVH*WHPQLHRVCSQCGP
Trigger: AGGTCCACATTGAGAGCAAACACGATGAAGCTGAGGATGCCAGCAGTGGACGGCTAGAAATAGATACCAGTGCCCAGAATAAGCATAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS GCA 90 bp CCACTGGAAAAGCTATCCAGGCCCAAGTTGTCCAGCTCTGGAAGTTaGTCATGGGAAATCATTTCATTCAGTTCCTCCTTCCTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: PLEKLSRPKLSSSGS*SWEIISFSSSFLSL
Trigger: CAAGGAGAGGAAGGAGGAACTGAATGAAATGATTTCCCATGAGCAACTTCCAGAGCTGGACAACTTGGGCCTGGATAGCTTTTCCAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS CCA 90 bp TATGCTTATTCTGGGCACTGGTATCTATTTCTAGCCGTCCACTGCTaGCATCCTCAGCTTCATCGTGTTTGCTCTCAATGTGGACCTCCA +
Preference number: 5 (lower is better)
Translates to: YAYSGHWYLFLAVHC*HPQLHRVCSQCGPP
Trigger: TGGAGGTCCACATTGAGAGCAAACACGATGAAGCTGAGGATGCCAGCAGTGGACGGCTAGAAATAGATACCAGTGCCCAGAATAAGCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CAA 90 bp GCTCTGGTTCCTCCTGCACAAAGCCCAGAATATGCTTGCCAGGTAGAGGGAAATCTCCTTGTCACTGCTTaGGTCATCAGAAAACACGAT +
Preference number: 5 (lower is better)
Translates to: ALVPPAQSPEYACQVEGNLLVTA*VIRKHD
Trigger: ATCGTGTTTTCTGATGACCAAAGCAGTGACAAGGAG...ATTTCCCTCTACCTGGCAAGCATATTCTGGGCTTTGTGCAGGAGGAACCAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CAA 90 bp GAAAACCCACCGGACCCTTCCTGTGCAGAACACTTCCTCACCACTTTCAGTCCTATTCAGGCTTGGCTTTaGAGTCATTTGCTTGTGTGT +
Preference number: 5 (lower is better)
Translates to: ENPPDPSCAEHFLTTFSPIQAWL*SHLLVC
Trigger: ACACACAAGCAAATGACTCAAAAGCCAAGCCTGAAT...AGGACTGAAAGTGGTGAGGAAGTGTTCTGCACAGGAAGGGTCCGGTGGGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS TCA 90 bp TTTGGCGTTCCTTCTGATTCGGGCAGTGGAGTCATAGATGATGTTTaGTCTCATCTGCAACAAAGCCTCTTCCCCAGGTCCACTGGAAAA +
Preference number: 5 (lower is better)
Translates to: FGVPSDSGSGVIDDV*SHLQQSLFPRSTGK
Trigger: TTTTCCAGTGGACCTGGGGAAGAGGCTTTGTTGCAGATGAGATCAAACATCATCTATGACTCCACTGCCCGAATCAGAAGGAACGCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS CCA 90 bp GAAAAGCTATCCAGGCCCAAGTTGTCCAGCTCTGGAAGTTGCTCATaGGAAATCATTTCATTCAGTTCCTCCTTCCTCTCCTTGTCACTG +
Preference number: 5 (lower is better)
Translates to: EKLSRPKLSSSGSCS*EIISFSSSFLSLSL
Trigger: CAGTGACAAGGAGAGGAAGGAGGAACTGAATGAAATGATTTCCCATGAGCAACTTCCAGAGCTGGACAACTTGGGCCTGGATAGCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS TCA 90 bp CTTCATGCTCTGGAGCAGTGTGTTAAAGTCGACACCGTCTTGCTCTaGGAAAACATCACCAAAGAGGGACATATCTTCTTCCAGAGGAGA +
Preference number: 5 (lower is better)
Translates to: LHALEQCVKVDTVLL*ENITKEGHIFFQRR
Trigger: TCTCCTCTGGAAGAAGATATGTCCCTCTTTGGTGATGTTTTCTCAGAGCAAGACGGTGTCGACTTTAACACACTGCTCCAGAGCATGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS CCA 90 bp CTTTGGTCATCAGAAAACACGATGAGCAAAGGGTTATGCTTATTCTaGGCACTGGTATCTATTTCTAGCCGTCCACTGCTGGCATCCTCA +
Preference number: 5 (lower is better)
Translates to: LWSSENTMSKGLCLF*ALVSISSRPLLASS
Trigger: TGAGGATGCCAGCAGTGGACGGCTAGAAATAGATACCAGTGCCCAGAATAAGCATAACCCTTTGCTCATCGTGTTTTCTGATGACCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CAA 90 bp CAGCTATACATCACACACACATACACACATCATGTTATATGGAGGCTGTTCCACGGCACACAGCAGGCTTaGGAAGCTTTCTGGGAATTC +
Preference number: 5 (lower is better)
Translates to: QLYITHTYTHHVIWRLFHGTQQA*EAFWEF
Trigger: GAATTCCCAGAAAGCTTCCAAAGCCTGCTGTGTGCC...GTGGAACAGCCTCCATATAACATGATGTGTGTATGTGTGTGTGATGTATAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS GCA 90 bp TCATCCTTCATGCTCTGGAGCAGTGTGTTAAAGTCGACACCGTCTTaGTCTGAGAAAACATCACCAAAGAGGGACATATCTTCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: SSFMLWSSVLKSTPS*SEKTSPKRDISSSR
Trigger: TCTGGAAGAAGATATGTCCCTCTTTGGTGATGTTTTCTCAGAGCAAGACGGTGTCGACTTTAACACACTGCTCCAGAGCATGAAGGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS GCA 90 bp TTGTCACTGCTTTGGTCATCAGAAAACACGATGAGCAAAGGGTTATaGTTATTCTGGGCACTGGTATCTATTTCTAGCCGTCCACTGCTG +
Preference number: 5 (lower is better)
Translates to: LSLLWSSENTMSKGL*LFWALVSISSRPLL
Trigger: CAGCAGTGGACGGCTAGAAATAGATACCAGTGCCCAGAATAAGCATAACCCTTTGCTCATCGTGTTTTCTGATGACCAAAGCAGTGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CAA 90 bp GTGGTTATTCAAAGCCAGCTATACATCACACACACATACACACATCATGTTATACTATCCAGGCCCAAGTaGTCCAGCTCTGGAAGTTGC +
Preference number: 5 (lower is better)
Translates to: VVIQSQLYITHTYTHHVILSRPK*SSSGSC
Trigger: GCAACTTCCAGAGCTGGACAACTTGGGCCTGGATAG...TATAACATGATGTGTGTATGTGTGTGTGATGTATAGCTGGCTTTGAATAACCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CAA 90 bp CCTAGAAACTCTTACATGAATATTTTGGCTGTGGGCTGCCCAAGTCCCTCTGCTTTGAATAACAATATGTaGCTCTCTGCACTCCCTTTC +
Preference number: 5 (lower is better)
Translates to: PRNSYMNILAVGCPSPSALNNNM*LSALPF
Trigger: GAAAGGGAGTGCAGAGAGCAACATATTGTTATTCAA...AGCAGAGGGACTTGGGCAGCCCACAGCCAAAATATTCATGTAAGAGTTTCTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS GCA 90 bp ATGGTAATTTTCCGGTCTACTCCATCGTATATCATACGATCCCTTTaGACCAGTGTGTATAGCCTAAGTTCAGCCATGATGACCTCTTCA +
Preference number: 5 (lower is better)
Translates to: MVIFRSTPSYIIRSL*TSVYSLSSAMMTSS
Trigger: TGAAGAGGTCATCATGGCTGAACTTAGGCTATACACACTGGTGCAAAGGGATCGTATGATATACGATGGAGTAGACCGGAAAATTACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS CCA 90 bp ATGTCAGAGAGGTTTAGTGTCTTAAGAAACTCATCCTTCATGCTCTaGAGCAGTGTGTTAAAGTCGACACCGTCTTGCTCTGAGAAAACA +
Preference number: 5 (lower is better)
Translates to: MSERFSVLRNSSFML*SSVLKSTPSCSEKT
Trigger: TGTTTTCTCAGAGCAAGACGGTGTCGACTTTAACACACTGCTCCAGAGCATGAAGGATGAGTTTCTTAAGACACTAAACCTCTCTGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CAA 90 bp ATACACACATCATGTTATATGGAGGCTGTTCCACAAATAGTGATTCTGAGTTGCCAGAACTGCAAAGGGTaGAGAATGACCCACAGTGAC +
Preference number: 5 (lower is better)
Translates to: IHTSCYMEAVPQIVILSCQNCKG*RMTHSD
Trigger: GTCACTGTGGGTCATTCTCAACCCTTTGCAGTTCTG...GCAACTCAGAATCACTATTTGTGGAACAGCCTCCATATAACATGATGTGTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CAA 90 bp ATACACACATCATGTTATATGGAGGCTGTTCCACAAATAGTGATTCTGAGTTGCGCACCATATGTGAGCTaGCAGAACTGCAAAGGGTTG +
Preference number: 5 (lower is better)
Translates to: IHTSCYMEAVPQIVILSCAPYVS*QNCKGL
Trigger: CAACCCTTTGCAGTTCTGCAAGCTCACATATGGTGC...GCAACTCAGAATCACTATTTGTGGAACAGCCTCCATATAACATGATGTGTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS CCA 90 bp GAAATCATTTCATTCAGTTCCTCCTTCCTCTCCTTGTCACTGCTTTaGTCATCAGAAAACACGATGAGCAAAGGGTTATGCTTATTCTGG +
Preference number: 5 (lower is better)
Translates to: EIISFSSSFLSLSLL*SSENTMSKGLCLFW
Trigger: CCAGAATAAGCATAACCCTTTGCTCATCGTGTTTTCTGATGACCAAAGCAGTGACAAGGAGAGGAAGGAGGAACTGAATGAAATGATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CAA 90 bp AATAGTGGGAAGCCTAGAAACTCTTACATGAATATTTTGGCTGTGGGCTGCCCAAATAGTGATTCTGAGTaGCATGGCTTTCTCAAAGCA +
Preference number: 5 (lower is better)
Translates to: NSGKPRNSYMNILAVGCPNSDSE*HGFLKA
Trigger: TGCTTTGAGAAAGCCATGCAACTCAGAATCACTATT...TGGGCAGCCCACAGCCAAAATATTCATGTAAGAGTTTCTAGGCTTCCCACTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CAA 90 bp AAGGGTTTTACCAGCACACCACTGTCATATGTATTAGACATAAAGAAAATTTGCCCAGTACTCATGGCCTaGCTTTCCTATTGTCTCAGG +
Preference number: 5 (lower is better)
Translates to: KGFTSTPLSYVLDIKKICPVLMA*LSYCLR
Trigger: CCTGAGACAATAGGAAAGCAAGGCCATGAGTACTGG...GCAAATTTTCTTTATGTCTAATACATATGACAGTGGTGTGCTGGTAAAACCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CAA 90 bp GATGTCAATTATCTTGACTTAAATCCTACTCAGAGAAGAGGTAACAGAGAACATCCAGTTGACATCACCTaGGCAGCTCAAGATAGACCA +
Preference number: 5 (lower is better)
Translates to: DVNYLDLNPTQRRGNREHPVDIT*AAQDRP
Trigger: TGGTCTATCTTGAGCTGCCAAGGTGATGTCAACTGG...ATGTTCTCTGTTACCTCTTCTCTGAGTAGGATTTAAGTCAAGATAATTGACATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CAA 90 bp TGGTTATTCAAAGCCAGCTATACATCACACACACATACACACATCATGTTATATAGTTTTGCAAGCCAGTaGACATCACCTTGGCAGCTC +
Preference number: 5 (lower is better)
Translates to: WLFKASYTSHTHTHIMLYSFASQ*TSPWQL
Trigger: GAGCTGCCAAGGTGATGTCAACTGGCTTGCAAAACT...ATATAACATGATGTGTGTATGTGTGTGTGATGTATAGCTGGCTTTGAATAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CAA 90 bp CTTGACTTAAATCCTACTCAGAGAAGAGGTAACAGAGAACATACCATTGGCCTTTTGGGGCTGACTCTTTaGGAAATCACTAAGCTAACA +
Preference number: 5 (lower is better)
Translates to: LDLNPTQRRGNREHTIGLLGLTL*EITKLT
Trigger: TGTTAGCTTAGTGATTTCCAAAAGAGTCAGCCCCAA...AAGGCCAATGGTATGTTCTCTGTTACCTCTTCTCTGAGTAGGATTTAAGTCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CAA 90 bp CAGCTATACATCACACACACATACACACATCATGTTATATGGAGGCTGTTCCACACAGAGAACATACCATaGGCCTTTAATATGCATACA +
Preference number: 5 (lower is better)
Translates to: QLYITHTYTHHVIWRLFHTENIP*AFNMHT
Trigger: TGTATGCATATTAAAGGCCAATGGTATGTTCTCTGT...GTGGAACAGCCTCCATATAACATGATGTGTGTATGTGTGTGTGATGTATAGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CAA 90 bp GTGGTTATTCAAAGCCAGCTATACATCACACACACATACACACATCATGTTATAAAAGAATTCGGCACTTaGGGGCTGACTCTTTTGGAA +
Preference number: 5 (lower is better)
Translates to: VVIQSQLYITHTYTHHVIKEFGT*GLTLLE
Trigger: TTCCAAAAGAGTCAGCCCCAAAGTGCCGAATTCTTT...TATAACATGATGTGTGTATGTGTGTGTGATGTATAGCTGGCTTTGAATAACCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CAA 90 bp GTGGTTATTCAAAGCCAGCTATACATCACACACACATACACACATCATGTTATAGAGCTGAGGTTCAAATaGGGCCTTCTTCAAAATAGT +
Preference number: 5 (lower is better)
Translates to: VVIQSQLYITHTYTHHVIELRFK*GLLQNS
Trigger: ACTATTTTGAAGAAGGCCCAATTTGAACCTCAGCTC...TATAACATGATGTGTGTATGTGTGTGTGATGTATAGCTGGCTTTGAATAACCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS-3UTR CAA 90 bp GATGTCAATTATCTTGACTTAAATCCTACTCAGAGAAGAGGTAACAGAGAACATTCTTACATGAATATTTaGGCTGTGGGCTGCCCAAGT +
Preference number: 5 (lower is better)
Translates to: DVNYLDLNPTQRRGNREHSYMNI*AVGCPS
Trigger: ACTTGGGCAGCCCACAGCCAAAATATTCATGTAAGA...ATGTTCTCTGTTACCTCTTCTCTGAGTAGGATTTAAGTCAAGATAATTGACATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS GCA 72 bp GCCGTCCACTGCTGGCATCCTCAGCTTCATCGTGTTTaGTCTCAATGTGGACCTCCAGCTGGTGGGTGGATG +
Preference number: 6 (lower is better)
Translates to: AVHCWHPQLHRV*SQCGPPAGGWM
Trigger: CATCCACCCACCAGCTGGAGGTCCACATTGAGAGCAAACACGATGAAGCTGAGGATGCCAGCAGTGGACGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS CAA 72 bp AGCCGTCCACTGCTGGCATCCTCAGCTTCATCGTGTTaGCTCTCAATGTGGACCTCCAGCTGGTGGGTGGAT +
Preference number: 6 (lower is better)
Translates to: SRPLLASSASSC*LSMWTSSWWVD
Trigger: ATCCACCCACCAGCTGGAGGTCCACATTGAGAGCAAACACGATGAAGCTGAGGATGCCAGCAGTGGACGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS CAA 90 bp TCTATTTCTAGCCGTCCACTGCTGGCATCCTCAGCTTCATCGTGTTaGCTCTCAATGTGGACCTCCAGCTGGTGGGTGGATGAGCCTGAC +
Preference number: 6 (lower is better)
Translates to: SISSRPLLASSASSC*LSMWTSSWWVDEPD
Trigger: GTCAGGCTCATCCACCCACCAGCTGGAGGTCCACATTGAGAGCAAACACGATGAAGCTGAGGATGCCAGCAGTGGACGGCTAGAAATAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS CCA 72 bp GCTTCATCGTGTTTGCTCTCAATGTGGACCTCCAGCTaGTGGGTGGATGAGCCTGACTTTTGCCAACGTCTG +
Preference number: 6 (lower is better)
Translates to: ASSCLLSMWTSS*WVDEPDFCQRL
Trigger: CAGACGTTGGCAAAAGTCAGGCTCATCCACCCACCAGCTGGAGGTCCACATTGAGAGCAAACACGATGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS CCA 72 bp ATCTCATCTGCAACAAAGCCTCTTCCCCAGGTCCACTaGAAAAGCTATCCAGGCCCAAGTTGTCCAGCTCTG +
Preference number: 6 (lower is better)
Translates to: ISSATKPLPQVH*KSYPGPSCPAL
Trigger: CAGAGCTGGACAACTTGGGCCTGGATAGCTTTTCCAGTGGACCTGGGGAAGAGGCTTTGTTGCAGATGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS CCA 72 bp TGTAGAGTTCCAACATGTACTCTGGTGGGTCCACCTTaGCTGAATCCTGCGTGGGGATGTCAGAGAGGTTTA +
Preference number: 6 (lower is better)
Translates to: CRVPTCTLVGPP*LNPAWGCQRGL
Trigger: TAAACCTCTCTGACATCCCCACGCAGGATTCAGCCAAGGTGGACCCACCAGAGTACATGTTGGAACTCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS CAA 72 bp TCCCCAGGTCCACTGGAAAAGCTATCCAGGCCCAAGTaGTCCAGCTCTGGAAGTTGCTCATGGGAAATCATT +
Preference number: 6 (lower is better)
Translates to: SPGPLEKLSRPK*SSSGSCSWEII
Trigger: AATGATTTCCCATGAGCAACTTCCAGAGCTGGACAACTTGGGCCTGGATAGCTTTTCCAGTGGACCTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS TCA 72 bp CCTTCTGATTCGGGCAGTGGAGTCATAGATGATGTTTaGTCTCATCTGCAACAAAGCCTCTTCCCCAGGTCC +
Preference number: 6 (lower is better)
Translates to: PSDSGSGVIDDV*SHLQQSLFPRS
Trigger: GGACCTGGGGAAGAGGCTTTGTTGCAGATGAGATCAAACATCATCTATGACTCCACTGCCCGAATCAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS GCA 72 bp TCACCAAAGAGGGACATATCTTCTTCCAGAGGAGACTaGTCTAGGTTCATGATGGGGCTGCCAGAAACCAAG +
Preference number: 6 (lower is better)
Translates to: SPKRDISSSRGD*SRFMMGLPETK
Trigger: CTTGGTTTCTGGCAGCCCCATCATGAACCTAGAGCAGTCTCCTCTGGAAGAAGATATGTCCCTCTTTGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS GCA 72 bp AACATGTACTCTGGTGGGTCCACCTTGGCTGAATCCTaGGTGGGGATGTCAGAGAGGTTTAGTGTCTTAAGA +
Preference number: 6 (lower is better)
Translates to: NMYSGGSTLAES*VGMSERFSVLR
Trigger: TCTTAAGACACTAAACCTCTCTGACATCCCCACGCAGGATTCAGCCAAGGTGGACCCACCAGAGTACATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS CCA 72 bp TCCAGGCCCAAGTTGTCCAGCTCTGGAAGTTGCTCATaGGAAATCATTTCATTCAGTTCCTCCTTCCTCTCC +
Preference number: 6 (lower is better)
Translates to: SRPKLSSSGSCS*EIISFSSSFLS
Trigger: GGAGAGGAAGGAGGAACTGAATGAAATGATTTCCCATGAGCAACTTCCAGAGCTGGACAACTTGGGCCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS CAA 90 bp AAAGCCTCTTCCCCAGGTCCACTGGAAAAGCTATCCAGGCCCAAGTaGTCCAGCTCTGGAAGTTGCTCATGGGAAATCATTTCATTCAGT +
Preference number: 6 (lower is better)
Translates to: KASSPGPLEKLSRPK*SSSGSCSWEIISFS
Trigger: ACTGAATGAAATGATTTCCCATGAGCAACTTCCAGAGCTGGACAACTTGGGCCTGGATAGCTTTTCCAGTGGACCTGGGGAAGAGGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS GCA 72 bp TATTCTGGGCACTGGTATCTATTTCTAGCCGTCCACTaGTGGCATCCTCAGCTTCATCGTGTTTGCTCTCAA +
Preference number: 6 (lower is better)
Translates to: YSGHWYLFLAVH*WHPQLHRVCSQ
Trigger: TTGAGAGCAAACACGATGAAGCTGAGGATGCCAGCAGTGGACGGCTAGAAATAGATACCAGTGCCCAGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS CCA 72 bp GAAGCTTTCTGGGAATTCTTGAGGTGGACCAAGGCCTaGATAATTGCATGCTTTGTGGGTGTGAGATGCTCT +
Preference number: 6 (lower is better)
Translates to: EAFWEFLRWTKA*IIACFVGVRCS
Trigger: AGAGCATCTCACACCCACAAAGCATGCAATTATCCAGGCCTTGGTCCACCTCAAGAATTCCCAGAAAGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS CAA 90 bp TCCACTGGAAAAGCTATCCAGGCCCAAGTTGTCCAGCTCTGGAAGTaGCTCATGGGAAATCATTTCATTCAGTTCCTCCTTCCTCTCCTT +
Preference number: 6 (lower is better)
Translates to: STGKAIQAQVVQLWK*LMGNHFIQFLLPLL
Trigger: AAGGAGAGGAAGGAGGAACTGAATGAAATGATTTCCCATGAGCAACTTCCAGAGCTGGACAACTTGGGCCTGGATAGCTTTTCCAGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS GCA 72 bp AAGCTATCCAGGCCCAAGTTGTCCAGCTCTGGAAGTTaGTCATGGGAAATCATTTCATTCAGTTCCTCCTTC +
Preference number: 6 (lower is better)
Translates to: KLSRPKLSSSGS*SWEIISFSSSF
Trigger: GAAGGAGGAACTGAATGAAATGATTTCCCATGAGCAACTTCCAGAGCTGGACAACTTGGGCCTGGATAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS TCA 72 bp CTGGAGCAGTGTGTTAAAGTCGACACCGTCTTGCTCTaGGAAAACATCACCAAAGAGGGACATATCTTCTTC +
Preference number: 6 (lower is better)
Translates to: LEQCVKVDTVLL*ENITKEGHIFF
Trigger: GAAGAAGATATGTCCCTCTTTGGTGATGTTTTCTCAGAGCAAGACGGTGTCGACTTTAACACACTGCTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS GCA 72 bp ATGCTCTGGAGCAGTGTGTTAAAGTCGACACCGTCTTaGTCTGAGAAAACATCACCAAAGAGGGACATATCT +
Preference number: 6 (lower is better)
Translates to: MLWSSVLKSTPS*SEKTSPKRDIS
Trigger: AGATATGTCCCTCTTTGGTGATGTTTTCTCAGAGCAAGACGGTGTCGACTTTAACACACTGCTCCAGAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS GCA 72 bp TTCCGGTCTACTCCATCGTATATCATACGATCCCTTTaGACCAGTGTGTATAGCCTAAGTTCAGCCATGATG +
Preference number: 6 (lower is better)
Translates to: FRSTPSYIIRSL*TSVYSLSSAMM
Trigger: CATCATGGCTGAACTTAGGCTATACACACTGGTGCAAAGGGATCGTATGATATACGATGGAGTAGACCGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS CCA 72 bp TCAGAAAACACGATGAGCAAAGGGTTATGCTTATTCTaGGCACTGGTATCTATTTCTAGCCGTCCACTGCTG +
Preference number: 6 (lower is better)
Translates to: SENTMSKGLCLF*ALVSISSRPLL
Trigger: CAGCAGTGGACGGCTAGAAATAGATACCAGTGCCCAGAATAAGCATAACCCTTTGCTCATCGTGTTTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS CCA 72 bp ACTGGAAAAGCTATCCAGGCCCAAGTTGTCCAGCTCTaGAAGTTGCTCATGGGAAATCATTTCATTCAGTTC +
Preference number: 6 (lower is better)
Translates to: TGKAIQAQVVQL*KLLMGNHFIQF
Trigger: GAACTGAATGAAATGATTTCCCATGAGCAACTTCCAGAGCTGGACAACTTGGGCCTGGATAGCTTTTCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2
CDS CAA 90 bp GGAAATCATTTCATTCAGTTCCTCCTTCCTCTCCTTGTCACTGCTTaGGTCATCAGAAAACACGATGAGCAAAGGGTTATGCTTATTCTG +
Preference number: 6 (lower is better)
Translates to: GNHFIQFLLPLLVTA*VIRKHDEQRVMLIL
Trigger: CAGAATAAGCATAACCCTTTGCTCATCGTGTTTTCTGATGACCAAAGCAGTGACAAGGAGAGGAAGGAGGAACTGAATGAAATGATTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295379.2