RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BICRA (Homo sapiens)

Ensembl gene IDs: ENSG00000063169

Ensembl transcript IDs: ENST00000396720.7, ENST00000594866.2, ENST00000602258.1, ENST00000614245.2

Found 591 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAACCCGGTaGCCCCATCCCTGGCAAACACATGCGCGTGTCCCCCGGACAGAG +
Preference number: 1 (lower is better)
Translates to: ATQTRQAPGALASTR*PHPWQTHARVPRTE
Trigger: CTCTGTCCGGGGGACACGCGCATGTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
3UTR GCA 90 bp CTCACTTGTGCACACACACACACACACAGGTCACGGAGCTGGACGTaGGGATGTCACACGGGTGCCTGCGGGCACAGCACGCTGGGAGGC +
Preference number: 1 (lower is better)
Translates to: LTCAHTHTHRSRSWT*GCHTGACGHSTLGG
Trigger: GCCTCCCAGCGTGCTGTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCTGTGTGTGTGTGTGTGTGCACAAGTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
3UTR CCA 90 bp CCACCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTaGCATCAACCCGGTGGCCCCATCCCTGGCAAACACATGCGCGTG +
Preference number: 1 (lower is better)
Translates to: PPSEKPHRQDRHPER*HQPGGPIPGKHMRV
Trigger: CACGCGCATGTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
3UTR GCA 90 bp ATTTCAAAGTCGAGGGGTGGGCGTTCGAAATCTCTCACTCACTTGTaGACACACACACACACACAGGTCACGGAGCTGGACGTGCGGATG +
Preference number: 1 (lower is better)
Translates to: ISKSRGGRSKSLTHL*THTHTQVTELDVRM
Trigger: CATCCGCACGTCCAGCTCCGTGACCTGTGTGTGTGTGTGTGTGCACAAGTGAGTGAGAGATTTCGAACGCCCACCCCTCGACTTTGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
3UTR-3UTR TCA 90 bp GACAGGCACCCGGAGCGTTGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACGAGTCCCCAGGAGGCTaGGGGCGGACACCCGACTGT +
Preference number: 2 (lower is better)
Translates to: DRHPERWHQPGGPIPGKHESPGG*GRTPDC
Trigger: ACAGTCGGGTGTCCGCCCTCAGCCTCCTGGGGACTC...GTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAACGCTCCGGGTGCCTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
3UTR-3UTR TCA 90 bp GACAGGCACCCGGAGCGTTGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACCCCCAGCAACCCAGCTaGAGCAGGCGGCAGGGAAGG +
Preference number: 2 (lower is better)
Translates to: DRHPERWHQPGGPIPGKHPQQPS*SRRQGR
Trigger: CCTTCCCTGCCGCCTGCTTCAGCTGGGTTGCTGGGG...GTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAACGCTCCGGGTGCCTGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
3UTR-3UTR TCA 90 bp GGACGTGCGGATGTCACACGGGTGCCTGCGGGCACAGCACGCTGGGAGGCTGGCCTCTCCGGTTTTGTTTaGCAGCCTGTTGGGGGCGGC +
Preference number: 2 (lower is better)
Translates to: GRADVTRVPAGTARWEAGLSGFV*QPVGGG
Trigger: GCCGCCCCCAACAGGCTGTCAAACAAAACCGGAGAG...GCCAGCCTCCCAGCGTGCTGTGCCCGCAGGCACCCGTGTGACATCCGCACGTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
3UTR-3UTR TCA 90 bp ACCCTCCACCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCGAGTCCCCAGGAGGCTaGGGGCGGACACCCGACTGT +
Preference number: 2 (lower is better)
Translates to: TLHHLRSHTDKTGTRSVGESPGG*GRTPDC
Trigger: ACAGTCGGGTGTCCGCCCTCAGCCTCCTGGGGACTC...GCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGGTGGAGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
3UTR-3UTR CCA 90 bp TCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGGAGGCAGGAAGAACAGAGGGCACAGGTCACGGAGCTaGACGTGCGGATGTCACACG +
Preference number: 2 (lower is better)
Translates to: SPRFQNLARAAGGRKNRGHRSRS*TCGCHT
Trigger: CGTGTGACATCCGCACGTCCAGCTCCGTGACCTGTG...CCCTCTGTTCTTCCTGCCTCCAGCCGCCCGCGCCAGATTTTGAAATCTCGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
3UTR-3UTR CCA 90 bp CTTACAGTACTAGTTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGGATGTTTGACAGCCTGTTaGGGGCGGCGGGGAGAGGCT +
Preference number: 2 (lower is better)
Translates to: LTVLVLSPRFQNLARAAGCLTAC*GRRGEA
Trigger: AGCCTCTCCCCGCCGCCCCCAACAGGCTGTCAAACA...TCCAGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAACTAGTACTGTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
3UTR-3UTR TCA 90 bp TTCAAAGTCGAGGGGTGGGCGTTCGAAATCTCTCACTCACTTGTGCACACACACGCACCCTCCACCATCTaGGAAGCCACACAGACAAGA +
Preference number: 2 (lower is better)
Translates to: FKVEGWAFEISHSLVHTHAPSTI*EATQTR
Trigger: TCTTGTCTGTGTGGCTTCTCAGATGGTGGAGGGTGC...GTGTGTGTGCACAAGTGAGTGAGAGATTTCGAACGCCCACCCCTCGACTTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
3UTR-3UTR GCA 90 bp TTCAAAGTCGAGGGGTGGGCGTTCGAAATCTCTCACTCACTTGTGCACACACACACTGACACAGCACTTTaGCCCTCCTTTGGCAGGGGA +
Preference number: 2 (lower is better)
Translates to: FKVEGWAFEISHSLVHTHTDTAL*PSFGRG
Trigger: TCCCCTGCCAAAGGAGGGGCAAAGTGCTGTGTCAGT...GTGTGTGTGCACAAGTGAGTGAGAGATTTCGAACGCCCACCCCTCGACTTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
3UTR-3UTR GCA 90 bp TATCTTACAGTACTAGTTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTTCACGGAGCTGGACGTaGGGATGTCACACGGGTGCC +
Preference number: 2 (lower is better)
Translates to: YLTVLVLSPRFQNLARAASRSWT*GCHTGA
Trigger: GGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGA...AGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAACTAGTACTGTAAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
3UTR-3UTR GCA 90 bp TATCTTACAGTACTAGTTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTTCCCTGGCAAACACATaGGCGTGTCCCCCGGACAGA +
Preference number: 2 (lower is better)
Translates to: YLTVLVLSPRFQNLARAASLANT*ACPPDR
Trigger: TCTGTCCGGGGGACACGCGCATGTGTTTGCCAGGGA...AGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAACTAGTACTGTAAGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
3UTR-3UTR GCA 90 bp TCTTACAGTACTAGTTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGGTCTCTCACTCACTTGTaGACACACACACACACACAG +
Preference number: 2 (lower is better)
Translates to: SYSTSFVSEISKSGAGGWSLTHL*THTHTQ
Trigger: CTGTGTGTGTGTGTGTGTGCACAAGTGAGTGAGAGA...CCAGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAACTAGTACTGTAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
3UTR GCA 72 bp CAGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTaGCTGCGGGCACAGCACGCTGGGAGGCTGGCTCCC +
Preference number: 3 (lower is better)
Translates to: QVTELDVRMSHG*LRAQHAGRLAP
Trigger: GGGAGCCAGCCTCCCAGCGTGCTGTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
3UTR-3UTR CAA 90 bp GGACGTGCGGATGTCACACGGGTGCCTGCGGGCACAGCACGCTGGGAGGCTGGCTTGTTTGACAGCCTGTaGGGGGCGGCGGGGAGAGGC +
Preference number: 3 (lower is better)
Translates to: GRADVTRVPAGTARWEAGLFDSL*GAAGRG
Trigger: GCCTCTCCCCGCCGCCCCCAACAGGCTGTCAAACAA...GCCAGCCTCCCAGCGTGCTGTGCCCGCAGGCACCCGTGTGACATCCGCACGTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
3UTR CCA 72 bp CCCGGAGCGTTGGCATCAACCCGGTGGCCCCATCCCTaGCAAACACATGCGCGTGTCCCCCGGACAGAGGGG +
Preference number: 3 (lower is better)
Translates to: PGALASTRWPHP*QTHARVPRTEG
Trigger: CCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAACGCTCCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
3UTR GCA 72 bp GCACACACACACACACACAGGTCACGGAGCTGGACGTaGGGATGTCACACGGGTGCCTGCGGGCACAGCACG +
Preference number: 3 (lower is better)
Translates to: AHTHTHRSRSWT*GCHTGACGHST
Trigger: CGTGCTGTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCTGTGTGTGTGTGTGTGTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
3UTR CCA 72 bp ACAAGACAGGCACCCGGAGCGTTGGCATCAACCCGGTaGCCCCATCCCTGGCAAACACATGCGCGTGTCCCC +
Preference number: 3 (lower is better)
Translates to: TRQAPGALASTR*PHPWQTHARVP
Trigger: GGGGACACGCGCATGTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAACGCTCCGGGTGCCTGTCTTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
3UTR-3UTR CAA 90 bp ACACACAGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTGCCTGCGGGCACCCTCTCCGGTTTTGTTaGACAGCCTGTTGGGGGCGG +
Preference number: 3 (lower is better)
Translates to: THRSRSWTCGCHTGACGHPLRFC*TACWGR
Trigger: CCGCCCCCAACAGGCTGTCAAACAAAACCGGAGAGG...GTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCTGTGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
3UTR CCA 72 bp GAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTaGCATCAACCCGGTGGCCCCATCCCTGGCAAACAC +
Preference number: 3 (lower is better)
Translates to: EKPHRQDRHPER*HQPGGPIPGKH
Trigger: GTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
3UTR CCA 72 bp ACTTGTGCACACACACACACACACAGGTCACGGAGCTaGACGTGCGGATGTCACACGGGTGCCTGCGGGCAC +
Preference number: 3 (lower is better)
Translates to: TCAHTHTHRSRS*TCGCHTGACGH
Trigger: GTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCTGTGTGTGTGTGTGTGTGCACAAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
3UTR-3UTR CAA 90 bp TCTTACAGTACTAGTTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGGCAGGCACCCGGAGCGTaGGCATCAACCCGGTGGCCC +
Preference number: 3 (lower is better)
Translates to: SYSTSFVSEISKSGAGGWQAPGA*ASTRWP
Trigger: GGGCCACCGGGTTGATGCCAACGCTCCGGGTGCCTG...CCAGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAACTAGTACTGTAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
3UTR GCA 72 bp TCGAGGGGTGGGCGTTCGAAATCTCTCACTCACTTGTaGACACACACACACACACAGGTCACGGAGCTGGAC +
Preference number: 3 (lower is better)
Translates to: SRGGRSKSLTHL*THTHTQVTELD
Trigger: GTCCAGCTCCGTGACCTGTGTGTGTGTGTGTGTGCACAAGTGAGTGAGAGATTTCGAACGCCCACCCCTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
3UTR-3UTR CAA 90 bp CTTACAGTACTAGTTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGGAACCCCCTCTCCGGTTTaGTTTGACAGCCTGTTGGGG +
Preference number: 3 (lower is better)
Translates to: LTVLVLSPRFQNLARAAGTPSPV*FDSLLG
Trigger: CCCCAACAGGCTGTCAAACAAAACCGGAGAGGGGGT...TCCAGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAACTAGTACTGTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
3UTR GCA 72 bp AGGAAATGGGAAGAAACAGGAACTGACACAGCACTTTaGCCCTCCTTTGGCAGGGGAGACGTTTTACATCAC +
Preference number: 3 (lower is better)
Translates to: RKWEETGTDTAL*PSFGRGDVLHH
Trigger: GTGATGTAAAACGTCTCCCCTGCCAAAGGAGGGGCAAAGTGCTGTGTCAGTTCCTGTTTCTTCCCATTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp GAGGCTGAGGGCGGACACCCGACTGTCCCGGCGTCTTCGGGAGGAGGGGACGGGACGCCCGGGCCCAGGTaGCCGAAGGGGAGCCGCCTG +
Preference number: 4 (lower is better)
Translates to: EAEGGHPTVPASSGGGDGTPGPR*PKGSRL
Trigger: CAGGCGGCTCCCCTTCGGTCACCTGGGCCCGGGCGT...CCCGTCCCCTCCTCCCGAAGACGCCGGGACAGTCGGGTGTCCGCCCTCAGCCTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp GAGGCTGAGGGCGGACACCCGACTGTCCCGGCGTCTTCGGGAGGAGGGGACGGGCCGCCAGCTCGCGGATaGGCCCGCTGGTGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: EAEGGHPTVPASSGGGDGPPARG*ARWWPR
Trigger: ACGAGGCCACCAGCGGGCTCATCCGCGAGCTGGCGG...CCCGTCCCCTCCTCCCGAAGACGCCGGGACAGTCGGGTGTCCGCCCTCAGCCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp AGGGCGGACACCCGACTGTCCCGGCGTCTTCGGGAGGAGGGGACGGGGAAGGGGGCGGCGGAGAGGATGTaGGCGCTGTGGGCCCCGGAG +
Preference number: 4 (lower is better)
Translates to: RADTRLSRRLREEGTGKGAAERM*ALWAPE
Trigger: CTCCGGGGCCCACAGCGCGCACATCCTCTCCGCCGC...CCCCTTCCCCGTCCCCTCCTCCCGAAGACGCCGGGACAGTCGGGTGTCCGCCCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp AGGGCGGACACCCGACTGTCCCGGCGTCTTCGGGAGGAGGGGACGGGGAAGGGGCGAAGGGGAGCCGCCTaGCCCGCCGTGCCGGATCAC +
Preference number: 4 (lower is better)
Translates to: RADTRLSRRLREEGTGKGRRGAA*PAVPDH
Trigger: GTGATCCGGCACGGCGGGGCAGGCGGCTCCCCTTCG...CCCCTTCCCCGTCCCCTCCTCCCGAAGACGCCGGGACAGTCGGGTGTCCGCCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp AGGGCGGACACCCGACTGTCCCGGCGTCTTCGGGAGGAGGGGACGGGGAAGGGGCTGGCTGGCTCTGCGTaGGCAGGCTGCCCGCCGCCA +
Preference number: 4 (lower is better)
Translates to: RADTRLSRRLREEGTGKGLAGSA*AGCPPP
Trigger: TGGCGGCGGGCAGCCTGCCCACGCAGAGCCAGCCAG...CCCCTTCCCCGTCCCCTCCTCCCGAAGACGCCGGGACAGTCGGGTGTCCGCCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp GAGGCTGAGGGCGGACACCCGACTGTCCCGGCGTCTTCGGGAGGAGGGGACGGGACGGTAGGCGGGCCCTaGAGCCCCAGCAGGTCGGTG +
Preference number: 4 (lower is better)
Translates to: EAEGGHPTVPASSGGGDGTVGGP*SPSRSV
Trigger: CACCGACCTGCTGGGGCTGCAGGGCCCGCCTACCGT...CCCGTCCCCTCCTCCCGAAGACGCCGGGACAGTCGGGTGTCCGCCCTCAGCCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp GAGGCTGAGGGCGGACACCCGACTGTCCCGGCGTCTTCGGGAGGAGGGGACGGGGGCAGGGCTGAGAGCTaGTGCGGGAGCTGGACCGCC +
Preference number: 4 (lower is better)
Translates to: EAEGGHPTVPASSGGGDGGRAES*CGSWTA
Trigger: GGCGGTCCAGCTCCCGCAGCAGCTCTCAGCCCTGCC...CCCGTCCCCTCCTCCCGAAGACGCCGGGACAGTCGGGTGTCCGCCCTCAGCCTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp GCTCGAGTCCCCAGGAGGCTGAGGGCGGACACCCGACTGTCCCGGCGTCTTCGGCCTGGGAAGAGGGCTTaGGGCCCCGCAGCCACGGCC +
Preference number: 4 (lower is better)
Translates to: ARVPRRLRADTRLSRRLRPGKRA*GPAATA
Trigger: GGCCGTGGCTGCGGGGCCCCAAGCCCTCTTCCCAGG...CCGAAGACGCCGGGACAGTCGGGTGTCCGCCCTCAGCCTCCTGGGGACTCGAGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp AGGGCGGACACCCGACTGTCCCGGCGTCTTCGGGAGGAGGGGACGGGGAAGGGGCGAGGCCAGCTCCTTTaGCGACGGGGGTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: RADTRLSRRLREEGTGKGRGQLL*RRGWLG
Trigger: CCCCAGCCACCCCCGTCGCCAAAGGAGCTGGCCTCG...CCCCTTCCCCGTCCCCTCCTCCCGAAGACGCCGGGACAGTCGGGTGTCCGCCCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp AGGGCGGACACCCGACTGTCCCGGCGTCTTCGGGAGGAGGGGACGGGGAAGGGGAGGCCAGGTAGCCGCTaGCGGGCACCTGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: RADTRLSRRLREEGTGKGRPGSR*RAPAWP
Trigger: TGGCCAAGCAGGTGCCCGTCAGCGGCTACCTGGCCT...CCCCTTCCCCGTCCCCTCCTCCCGAAGACGCCGGGACAGTCGGGTGTCCGCCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp GAGGCTGAGGGCGGACACCCGACTGTCCCGGCGTCTTCGGGAGGAGGGGACGGGCCTTCCCCGCCGCCATaGACGTCAGGTTCTGCGGGG +
Preference number: 4 (lower is better)
Translates to: EAEGGHPTVPASSGGGDGPSPPP*TSGSAG
Trigger: CCCCGCAGAACCTGACGTTCATGGCGGCGGGGAAGG...CCCGTCCCCTCCTCCCGAAGACGCCGGGACAGTCGGGTGTCCGCCCTCAGCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp AGGGCGGACACCCGACTGTCCCGGCGTCTTCGGGAGGAGGGGACGGGGAAGGGGGAGTCCCCAGGAGGCTaGGGGCGGACACCCGACTGT +
Preference number: 4 (lower is better)
Translates to: RADTRLSRRLREEGTGKGESPGG*GRTPDC
Trigger: ACAGTCGGGTGTCCGCCCTCAGCCTCCTGGGGACTC...CCCCTTCCCCGTCCCCTCCTCCCGAAGACGCCGGGACAGTCGGGTGTCCGCCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp AGGGCGGACACCCGACTGTCCCGGCGTCTTCGGGAGGAGGGGACGGGGAAGGGGCCCCAGCAACCCAGCTaGAGCAGGCGGCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: RADTRLSRRLREEGTGKGPQQPS*SRRQGR
Trigger: CCTTCCCTGCCGCCTGCTTCAGCTGGGTTGCTGGGG...CCCCTTCCCCGTCCCCTCCTCCCGAAGACGCCGGGACAGTCGGGTGTCCGCCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp GCTCGAGTCCCCAGGAGGCTGAGGGCGGACACCCGACTGTCCCGGCGTCTTCGGCGGGCGACTCGGACTTaGGCCGCTTGGCAGGGGGCA +
Preference number: 4 (lower is better)
Translates to: ARVPRRLRADTRLSRRLRRATRT*AAWQGA
Trigger: TGCCCCCTGCCAAGCGGCGCAAGTCCGAGTCGCCCG...CCGAAGACGCCGGGACAGTCGGGTGTCCGCCCTCAGCCTCCTGGGGACTCGAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp AGGGCGGACACCCGACTGTCCCGGCGTCTTCGGGAGGAGGGGACGGGGAAGGGGTCTGCCCGCCCACGTTaGCCGGCAGGGCTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: RADTRLSRRLREEGTGKGSARPR*PAGLRA
Trigger: AGCTCTCAGCCCTGCCGGCCAACGTGGGCGGGCAGA...CCCCTTCCCCGTCCCCTCCTCCCGAAGACGCCGGGACAGTCGGGTGTCCGCCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp AGGGCGGACACCCGACTGTCCCGGCGTCTTCGGGAGGAGGGGACGGGGAAGGGGCGGCTGGGGCAGCGCTaGGAAGGGGGTGGTCACCAT +
Preference number: 4 (lower is better)
Translates to: RADTRLSRRLREEGTGKGRLGQR*EGGGHH
Trigger: ATGGTGACCACCCCCTTCCCAGCGCTGCCCCAGCCG...CCCCTTCCCCGTCCCCTCCTCCCGAAGACGCCGGGACAGTCGGGTGTCCGCCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp GCTCGAGTCCCCAGGAGGCTGAGGGCGGACACCCGACTGTCCCGGCGTCTTCGGAGGCCAGGTAGCCGCTaGCGGGCACCTGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: ARVPRRLRADTRLSRRLRRPGSR*RAPAWP
Trigger: TGGCCAAGCAGGTGCCCGTCAGCGGCTACCTGGCCT...CCGAAGACGCCGGGACAGTCGGGTGTCCGCCCTCAGCCTCCTGGGGACTCGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp AGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTGCCTGCGGGCACAGCACGTGGCTGTCGGGGGCCTaGGGGCCGAGGCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: RSRSWTCGCHTGACGHSTWLSGA*GPRPAP
Trigger: AGGAGCTGGCCTCGGCCCTCAGGCCCCCGACAGCCA...CGTGCTGTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp CCATCCCTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCACGCCCGGGCCCAGGTaGCCGAAGGGGAGCCGCCTG +
Preference number: 4 (lower is better)
Translates to: PSLANTCACPPDRGAECATPGPR*PKGSRL
Trigger: CAGGCGGCTCCCCTTCGGTCACCTGGGCCCGGGCGT...GGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAGGGATGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp GAGGCTGAGGGCGGACACCCGACTGTCCCGGCGTCTTCGGGAGGAGGGGACGGGTCTGCAGGTGCTCGGTaGGCGTGTCATCCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: EAEGGHPTVPASSGGGDGSAGAR*ACHPAG
Trigger: GCCCGCAGGATGACACGCTCACCGAGCACCTGCAGA...CCCGTCCCCTCCTCCCGAAGACGCCGGGACAGTCGGGTGTCCGCCCTCAGCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp AGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTGCCTGCGGGCACAGCACGCGAAGGGGAGCCGCCTaGCCCGCCGTGCCGGATCAC +
Preference number: 4 (lower is better)
Translates to: RSRSWTCGCHTGACGHSTRRGAA*PAVPDH
Trigger: GTGATCCGGCACGGCGGGGCAGGCGGCTCCCCTTCG...CGTGCTGTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp GGACGTGCGGATGTCACACGGGTGCCTGCGGGCACAGCACGCTGGGAGGCTGGCGCGGGTGGTCCACCGTaGCGTTCATCTGGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: GRADVTRVPAGTARWEAGAGGPP*RSSGPW
Trigger: CCACGGGCCAGATGAACGGCACGGTGGACCACCCGC...GCCAGCCTCCCAGCGTGCTGTGCCCGCAGGCACCCGTGTGACATCCGCACGTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp AGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTGCCTGCGGGCACAGCACGAGTCGGGGTCCCCGGTaGCTTGGGCGGCGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: RSRSWTCGCHTGACGHSTSRGPR*LGRRWL
Trigger: CAGCCAGCGCCGCCCAAGGCACCGGGGACCCCGACT...CGTGCTGTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp AGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTGCCTGCGGGCACAGCACGCAGGCCAGCCCCCTGTaGCGAGACACCGGCCGACGC +
Preference number: 4 (lower is better)
Translates to: RSRSWTCGCHTGACGHSTQASPL*RDTGRR
Trigger: GCGTCGGCCGGTGTCTCGCCACAGGGGGCTGGCCTG...CGTGCTGTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp GCTCGAGTCCCCAGGAGGCTGAGGGCGGACACCCGACTGTCCCGGCGTCTTCGGAGGCACCCGGAGCGTTaGCATCAACCCGGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: ARVPRRLRADTRLSRRLRRHPER*HQPGGP
Trigger: GGGGCCACCGGGTTGATGCCAACGCTCCGGGTGCCT...CCGAAGACGCCGGGACAGTCGGGTGTCCGCCCTCAGCCTCCTGGGGACTCGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp GAGGCTGAGGGCGGACACCCGACTGTCCCGGCGTCTTCGGGAGGAGGGGACGGGTGGCCGGTGGCTGCTTaGAGACGTTCGCTTGCAGCG +
Preference number: 4 (lower is better)
Translates to: EAEGGHPTVPASSGGGDGWPVAA*RRSLAA
Trigger: CGCTGCAAGCGAACGTCTTCAAGCAGCCACCGGCCA...CCCGTCCCCTCCTCCCGAAGACGCCGGGACAGTCGGGTGTCCGCCCTCAGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp CCATCCCTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCGGCCGTCGGGGGTGTTaGGCATGGCCACGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: PSLANTCACPPDRGAECAGRRGC*AWPRRW
Trigger: CCAGCGCCGTGGCCATGCTCAACACCCCCGACGGCC...GGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAGGGATGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp CCATCCCTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCGGAGGCCCCGGGAGCTaGAGACGACAGGGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: PSLANTCACPPDRGAECAGGPGS*RRQGAV
Trigger: CACGGCCCCCTGTCGTCTTCAGCTCCCGGGGCCTCC...GGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAGGGATGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp AGGGCGGACACCCGACTGTCCCGGCGTCTTCGGGAGGAGGGGACGGGGAAGGGGTCCAGGGCCGTGTTGTaGACGACCTTGCTGAGCCCG +
Preference number: 4 (lower is better)
Translates to: RADTRLSRRLREEGTGKGSRAVL*TTLLSP
Trigger: CGGGCTCAGCAAGGTCGTGCACAACACGGCCCTGGA...CCCCTTCCCCGTCCCCTCCTCCCGAAGACGCCGGGACAGTCGGGTGTCCGCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp GAGGCTGAGGGCGGACACCCGACTGTCCCGGCGTCTTCGGGAGGAGGGGACGGGCTGTCGATGGCGCTCTaGAGGTGCTCGGTGAGCGTG +
Preference number: 4 (lower is better)
Translates to: EAEGGHPTVPASSGGGDGLSMAL*RCSVSV
Trigger: CACGCTCACCGAGCACCTGCAGAGCGCCATCGACAG...CCCGTCCCCTCCTCCCGAAGACGCCGGGACAGTCGGGTGTCCGCCCTCAGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp GCTCGAGTCCCCAGGAGGCTGAGGGCGGACACCCGACTGTCCCGGCGTCTTCGGTGCAGGGTGGGCAGCTaGAAGGGACCCAGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: ARVPRRLRADTRLSRRLRCRVGS*KGPRSS
Trigger: GCTGGACCTGGGTCCCTTCCAGCTGCCCACCCTGCA...CCGAAGACGCCGGGACAGTCGGGTGTCCGCCCTCAGCCTCCTGGGGACTCGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp AGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTGCCTGCGGGCACAGCACGGGCGGCACCAGGGCCTaGTGGGTCAGCACGGTAGGC +
Preference number: 4 (lower is better)
Translates to: RSRSWTCGCHTGACGHSTGGTRA*WVSTVG
Trigger: GCCTACCGTGCTGACCCACCAGGCCCTGGTGCCGCC...CGTGCTGTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp GCTCGAGTCCCCAGGAGGCTGAGGGCGGACACCCGACTGTCCCGGCGTCTTCGGAGCGACACGGGCATCTaGAAGAGCGCAGGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: ARVPRRLRADTRLSRRLRSDTGI*KSAGWP
Trigger: GGGCCAGCCTGCGCTCTTCCAGATGCCCGTGTCGCT...CCGAAGACGCCGGGACAGTCGGGTGTCCGCCCTCAGCCTCCTGGGGACTCGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp CCATCCCTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCTGCGCCTGCGGCTGCTaGAGGCCCAGGGGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: PSLANTCACPPDRGAECACACGC*RPRGRG
Trigger: ACCCCTGCCCCTGGGCCTCCAGCAGCCGCAGGCGCA...GGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAGGGATGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp AGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTGCCTGCGGGCACAGCACGGCGGGACACACTCTGTaGCCGGGAGGGTGGGCGGGA +
Preference number: 4 (lower is better)
Translates to: RSRSWTCGCHTGACGHSTAGHTL*PGGWAG
Trigger: TCCCGCCCACCCTCCCGGCCACAGAGTGTGTCCCGC...CGTGCTGTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp CCATCCCTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCTCAGGCGGCTGGGACTaGGGGCGGAGAGGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: PSLANTCACPPDRGAECASGGWD*GRRGGC
Trigger: GCAGCCGCCTCTCCGCCCCCAGTCCCAGCCGCCTGA...GGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAGGGATGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp GAGGCTGAGGGCGGACACCCGACTGTCCCGGCGTCTTCGGGAGGAGGGGACGGGGGATGGCGTAGGGGCTaGCAACCTGGAGGACGTCTC +
Preference number: 4 (lower is better)
Translates to: EAEGGHPTVPASSGGGDGGWRRG*QPGGRL
Trigger: GAGACGTCCTCCAGGTTGCCAGCCCCTACGCCATCC...CCCGTCCCCTCCTCCCGAAGACGCCGGGACAGTCGGGTGTCCGCCCTCAGCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp GCTCGAGTCCCCAGGAGGCTGAGGGCGGACACCCGACTGTCCCGGCGTCTTCGGGACTTGTGGGGCCCCTaGCTGGGTGGGAACTGGAGC +
Preference number: 4 (lower is better)
Translates to: ARVPRRLRADTRLSRRLRDLWGP*LGGNWS
Trigger: GCTCCAGTTCCCACCCAGCCAGGGGCCCCACAAGTC...CCGAAGACGCCGGGACAGTCGGGTGTCCGCCCTCAGCCTCCTGGGGACTCGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp AGGGCGGACACCCGACTGTCCCGGCGTCTTCGGGAGGAGGGGACGGGGAAGGGGGCGCTGGGAAGGGGGTaGTCACCATCTGGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: RADTRLSRRLREEGTGKGALGRG*SPSGRS
Trigger: GGACCTTCCAGATGGTGACCACCCCCTTCCCAGCGC...CCCCTTCCCCGTCCCCTCCTCCCGAAGACGCCGGGACAGTCGGGTGTCCGCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACATGCGCGTGTCCCCCGGAGAGGAGGGAGGCCTGTaGCGGCCATGGGTGCCGGGG +
Preference number: 4 (lower is better)
Translates to: WHQPGGPIPGKHMRVSPGEEGGL*RPWVPG
Trigger: CCCCGGCACCCATGGCCGCCACAGGCCTCCCTCCTC...TCCGGGGGACACGCGCATGTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp CCATCCCTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCTGGCCTCGTCCACTTTaGCGGGCAGCGGCGCCGGGC +
Preference number: 4 (lower is better)
Translates to: PSLANTCACPPDRGAECAWPRPL*RAAAPG
Trigger: GCCCGGCGCCGCTGCCCGCCAAAGTGGACGAGGCCA...GGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAGGGATGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp AGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTGCCTGCGGGCACAGCACGATGGGGCCTGCCCACTaGCCAGCACAGACGCAGCGG +
Preference number: 4 (lower is better)
Translates to: RSRSWTCGCHTGACGHSTMGPAH*PAQTQR
Trigger: CCGCTGCGTCTGTGCTGGTCAGTGGGCAGGCCCCAT...CGTGCTGTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp TCCCTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGACGGTAGGCGGGCCCTaGAGCCCCAGCAGGTCGGTG +
Preference number: 4 (lower is better)
Translates to: SLANTCACPPDRGAECARTVGGP*SPSRSV
Trigger: CACCGACCTGCTGGGGCTGCAGGGCCCGCCTACCGT...CCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp GAGGCTGAGGGCGGACACCCGACTGTCCCGGCGTCTTCGGGAGGAGGGGACGGGGTGGTGGCCGGTGGCTaGTTGAAGACGTTCGCTTGC +
Preference number: 4 (lower is better)
Translates to: EAEGGHPTVPASSGGGDGVVAGG*LKTFAC
Trigger: GCAAGCGAACGTCTTCAAGCAGCCACCGGCCACCAC...CCCGTCCCCTCCTCCCGAAGACGCCGGGACAGTCGGGTGTCCGCCCTCAGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp ACACACAGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTGCCTGCGGGCACGGCAGGGCTGAGAGCTaGTGCGGGAGCTGGACCGCC +
Preference number: 4 (lower is better)
Translates to: THRSRSWTCGCHTGACGHGRAES*CGSWTA
Trigger: GGCGGTCCAGCTCCCGCAGCAGCTCTCAGCCCTGCC...GTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCTGTGTGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp GGACGTGCGGATGTCACACGGGTGCCTGCGGGCACAGCACGCTGGGAGGCTGGCTCACGGAGCTGGACGTaGGGATGTCACACGGGTGCC +
Preference number: 4 (lower is better)
Translates to: GRADVTRVPAGTARWEAGSRSWT*GCHTGA
Trigger: GGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGA...GCCAGCCTCCCAGCGTGCTGTGCCCGCAGGCACCCGTGTGACATCCGCACGTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp GGACGTGCGGATGTCACACGGGTGCCTGCGGGCACAGCACGCTGGGAGGCTGGCCGGCTGGTTGGGCTCTaGGTTCAGGTGGTTGCCGGA +
Preference number: 4 (lower is better)
Translates to: GRADVTRVPAGTARWEAGRLVGL*VQVVAG
Trigger: TCCGGCAACCACCTGAACCCAGAGCCCAACCAGCCG...GCCAGCCTCCCAGCGTGCTGTGCCCGCAGGCACCCGTGTGACATCCGCACGTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp ACACAGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTGCCTGCGGGCACAGGGCACCAGGGCCTGGTaGGTCAGCACGGTAGGCGGG +
Preference number: 4 (lower is better)
Translates to: TQVTELDVRMSHGCLRAQGTRAW*VSTVGG
Trigger: CCCGCCTACCGTGCTGACCCACCAGGCCCTGGTGCC...CTGTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCTGTGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp ACACACAGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTGCCTGCGGGCACGGCACCAGGGCCTGGTaGGTCAGCACGGTAGGCGGG +
Preference number: 4 (lower is better)
Translates to: THRSRSWTCGCHTGACGHGTRAW*VSTVGG
Trigger: CCCGCCTACCGTGCTGACCCACCAGGCCCTGGTGCC...GTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCTGTGTGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp CCATCCCTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCCCAGTGTGGCCGCCGTaGCACCCCCAGGGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: PSLANTCACPPDRGAECAPVWPP*HPQGCH
Trigger: ATGGCAGCCCTGGGGGTGCCACGGCGGCCACACTGG...GGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAGGGATGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp ACACAGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTGCCTGCGGGCACAGGACAGCACCACGTTCTaGCCCGCCTTCCCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: TQVTELDVRMSHGCLRAQDSTTF*PAFPAA
Trigger: GGCGGCGGGGAAGGCGGGCCAGAACGTGGTGCTGTC...CTGTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCTGTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp GCACCCGGAGCGTTGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACATGCGAGCTGTCCACCTGTGTaGGGGGCAGCGGCCGCCAGG +
Preference number: 4 (lower is better)
Translates to: APGALASTRWPHPWQTHASCPPV*GAAAAR
Trigger: CCTGGCGGCCGCTGCCCCCCACACAGGTGGACAGCT...CGCATGTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAACGCTCCGGGTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp AGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTGCCTGCGGGCACAGCACGCTTTGGCGACGGGGGTaGCTGGGGCTGGGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: RSRSWTCGCHTGACGHSTLWRRG*LGLGLG
Trigger: CCCAAGACCCAGCCCCAGCCACCCCCGTCGCCAAAG...CGTGCTGTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp GCACCCGGAGCGTTGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACATGCGCGAGGCCAGCTCCTTTaGCGACGGGGGTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: APGALASTRWPHPWQTHARGQLL*RRGWLG
Trigger: CCCCAGCCACCCCCGTCGCCAAAGGAGCTGGCCTCG...CGCATGTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAACGCTCCGGGTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp GACAGGCACCCGGAGCGTTGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACGGACGAAGAGGGGCCTaGGCCCTTCAGCGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: DRHPERWHQPGGPIPGKHGRRGA*ALQRSR
Trigger: GCGGCTCCGCTGAAGGGCCCAGGCCCCTCTTCGTCC...GTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAACGCTCCGGGTGCCTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp CCATCCCTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCGGACGAAGAGGGGCCTaGGCCCTTCAGCGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: PSLANTCACPPDRGAECAGRRGA*ALQRSR
Trigger: GCGGCTCCGCTGAAGGGCCCAGGCCCCTCTTCGTCC...GGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAGGGATGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp CCATCCCTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCGCGGGACACACTCTGTaGCCGGGAGGGTGGGCGGGA +
Preference number: 4 (lower is better)
Translates to: PSLANTCACPPDRGAECAAGHTL*PGGWAG
Trigger: TCCCGCCCACCCTCCCGGCCACAGAGTGTGTCCCGC...GGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAGGGATGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACATGCGCGTGTCCCCCGGACGGAAGAGGCTGCGATaGGGAGGCCGAGCGAGCGGG +
Preference number: 4 (lower is better)
Translates to: WHQPGGPIPGKHMRVSPGRKRLR*GGRASG
Trigger: CCCGCTCGCTCGGCCTCCCCATCGCAGCCTCTTCCG...TCCGGGGGACACGCGCATGTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp ACACACAGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTGCCTGCGGGCACCGGAAGAGGCTGCGATaGGGAGGCCGAGCGAGCGGG +
Preference number: 4 (lower is better)
Translates to: THRSRSWTCGCHTGACGHRKRLR*GGRASG
Trigger: CCCGCTCGCTCGGCCTCCCCATCGCAGCCTCTTCCG...GTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCTGTGTGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp GACAGGCACCCGGAGCGTTGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACGGTTGCGGGAGGGCATaGGGCCGTCCTCGTCGGCGT +
Preference number: 4 (lower is better)
Translates to: DRHPERWHQPGGPIPGKHGCGRA*GRPRRR
Trigger: ACGCCGACGAGGACGGCCCCATGCCCTCCCGCAACC...GTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAACGCTCCGGGTGCCTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp AGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTGCCTGCGGGCACAGCACGACCGTGCCGTTCATCTaGCCCGTGGGCGGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: RSRSWTCGCHTGACGHSTTVPFI*PVGGGG
Trigger: ACCACCGCCGCCCACGGGCCAGATGAACGGCACGGT...CGTGCTGTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp GCTCGAGTCCCCAGGAGGCTGAGGGCGGACACCCGACTGTCCCGGCGTCTTCGGCGGCCCGGTGTTATCTaGTCAACGTCCTGGCGCCGA +
Preference number: 4 (lower is better)
Translates to: ARVPRRLRADTRLSRRLRRPGVI*STSWRR
Trigger: TCGGCGCCAGGACGTTGACCAGATAACACCGGGCCG...CCGAAGACGCCGGGACAGTCGGGTGTCCGCCCTCAGCCTCCTGGGGACTCGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp GCACCCGGAGCGTTGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACATGCGGCAGGGAGTCCTGAGTaGGGATGGCCGTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: APGALASTRWPHPWQTHAAGSPE*GWPWGW
Trigger: CCACCCCCACGGCCATCCTCACTCAGGACTCCCTGC...CGCATGTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAACGCTCCGGGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp CTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGAAATGGCTGTCGGGGGCCTaGGGGCCGAGGCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LANTCACPPDRGAECARKWLSGA*GPRPAP
Trigger: AGGAGCTGGCCTCGGCCCTCAGGCCCCCGACAGCCA...TTTCCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp TCCCTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGTGGCCGGGAAGCCGATaGCCCTCGGAAGAGGCTGCG +
Preference number: 4 (lower is better)
Translates to: SLANTCACPPDRGAECARWPGSR*PSEEAA
Trigger: CGCAGCCTCTTCCGAGGGTCATCGGCTTCCCGGCCA...CCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp ACACAGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTGCCTGCGGGCACAGGAGTCCCCAGGAGGCTaGGGGCGGACACCCGACTGT +
Preference number: 4 (lower is better)
Translates to: TQVTELDVRMSHGCLRAQESPGG*GRTPDC
Trigger: ACAGTCGGGTGTCCGCCCTCAGCCTCCTGGGGACTC...CTGTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCTGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp GCTCGAGTCCCCAGGAGGCTGAGGGCGGACACCCGACTGTCCCGGCGTCTTCGGCTCTCCGGTTTTGTTTaGCAGCCTGTTGGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: ARVPRRLRADTRLSRRLRLSGFV*QPVGGG
Trigger: GCCGCCCCCAACAGGCTGTCAAACAAAACCGGAGAG...CCGAAGACGCCGGGACAGTCGGGTGTCCGCCCTCAGCCTCCTGGGGACTCGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp GACAGGCACCCGGAGCGTTGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACCCGCCATCCGCAGGCTaGAGGGTGGGCAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: DRHPERWHQPGGPIPGKHPPSAG*RVGSWK
Trigger: CTTCCAGCTGCCCACCCTGCAGCCTGCGGATGGCGG...GTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAACGCTCCGGGTGCCTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp TCCCTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGGCGGGTGGTCCACCGTaGCGTTCATCTGGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: SLANTCACPPDRGAECARAGGPP*RSSGPW
Trigger: CCACGGGCCAGATGAACGGCACGGTGGACCACCCGC...CCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp GGACGTGCGGATGTCACACGGGTGCCTGCGGGCACAGCACGCTGGGAGGCTGGCATGGCGCTCTGCAGGTaGTCGGTGAGCGTGTCATCC +
Preference number: 4 (lower is better)
Translates to: GRADVTRVPAGTARWEAGMALCR*SVSVSS
Trigger: GGATGACACGCTCACCGAGCACCTGCAGAGCGCCAT...GCCAGCCTCCCAGCGTGCTGTGCCCGCAGGCACCCGTGTGACATCCGCACGTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp GACAGGCACCCGGAGCGTTGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACCGGCCGGGGGCCTGCTaGAGGTTCAGGATGCTGTCG +
Preference number: 4 (lower is better)
Translates to: DRHPERWHQPGGPIPGKHRPGAC*RFRMLS
Trigger: CGACAGCATCCTGAACCTGCAGCAGGCCCCCGGCCG...GTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAACGCTCCGGGTGCCTGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp GCACCCGGAGCGTTGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACATGCGGTCCGGCCGGGGGCCTaGTGCAGGTTCAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: APGALASTRWPHPWQTHAVRPGA*CRFRML
Trigger: CAGCATCCTGAACCTGCAGCAGGCCCCCGGCCGGAC...CGCATGTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAACGCTCCGGGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp GACAGGCACCCGGAGCGTTGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACGTCCGGCCGGGGGCCTaGTGCAGGTTCAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: DRHPERWHQPGGPIPGKHVRPGA*CRFRML
Trigger: CAGCATCCTGAACCTGCAGCAGGCCCCCGGCCGGAC...GTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAACGCTCCGGGTGCCTGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp AGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTGCCTGCGGGCACAGCACGTGTCACACGGGTGCCTaGGGGCACAGCACGCTGGGA +
Preference number: 4 (lower is better)
Translates to: RSRSWTCGCHTGACGHSTCHTGA*GHSTLG
Trigger: TCCCAGCGTGCTGTGCCCGCAGGCACCCGTGTGACA...CGTGCTGTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp AGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTGCCTGCGGGCACAGCACGTGCAGGGTGGGCAGCTaGAAGGGACCCAGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: RSRSWTCGCHTGACGHSTCRVGS*KGPRSS
Trigger: GCTGGACCTGGGTCCCTTCCAGCTGCCCACCCTGCA...CGTGCTGTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACATGCGCGTGTCCCCCGGAAGCGCCATGACGGGCTaGCCCACCACCTGGATGGGC +
Preference number: 4 (lower is better)
Translates to: WHQPGGPIPGKHMRVSPGSAMTG*PTTWMG
Trigger: GCCCATCCAGGTGGTGGGCCAGCCCGTCATGGCGCT...TCCGGGGGACACGCGCATGTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp GCACCCGGAGCGTTGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACATGCGAGCGCCATGACGGGCTaGCCCACCACCTGGATGGGC +
Preference number: 4 (lower is better)
Translates to: APGALASTRWPHPWQTHASAMTG*PTTWMG
Trigger: GCCCATCCAGGTGGTGGGCCAGCCCGTCATGGCGCT...CGCATGTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAACGCTCCGGGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp AGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAACCCGGTGGCCCAGGCCAGCCCCCTGTaGCGAGACACCGGCCGACGC +
Preference number: 4 (lower is better)
Translates to: RSHTDKTGTRSVGINPVAQASPL*RDTGRR
Trigger: GCGTCGGCCGGTGTCTCGCCACAGGGGGCTGGCCTG...GGCCACCGGGTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp AAGACAGGCACCCGGAGCGTTGGCATCAACCCGGTGGCCCCATCCCTGGCAAACGGCAGGGTGACCCCCTaGAGGACAGTGGTGGCGGCC +
Preference number: 4 (lower is better)
Translates to: KTGTRSVGINPVAPSLANGRVTP*RTVVAA
Trigger: GGCCGCCACCACTGTCCTCCAGGGGGTCACCCTGCC...GTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAACGCTCCGGGTGCCTGTCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp CTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGAAAGGTCCCTCAGGCGGCTaGGACTGGGGGCGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: LANTCACPPDRGAECARKGPSGG*DWGRRG
Trigger: GCCTCTCCGCCCCCAGTCCCAGCCGCCTGAGGGACC...TTTCCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp GGACGTGCGGATGTCACACGGGTGCCTGCGGGCACAGCACGCTGGGAGGCTGGCGAGCTGGAAGTCGGATaGCGTAGGGGCTGGCAACCT +
Preference number: 4 (lower is better)
Translates to: GRADVTRVPAGTARWEAGELEVG*RRGWQP
Trigger: AGGTTGCCAGCCCCTACGCCATCCGACTTCCAGCTC...GCCAGCCTCCCAGCGTGCTGTGCCCGCAGGCACCCGTGTGACATCCGCACGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp AGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTGCCTGCGGGCACAGCACGAGAAGAGCCTTCGGCTaGGGCAGCGCTGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: RSRSWTCGCHTGACGHSTRRAFG*GSAGKG
Trigger: CCCCTTCCCAGCGCTGCCCCAGCCGAAGGCTCTTCT...CGTGCTGTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp AAGACAGGCACCCGGAGCGTTGGCATCAACCCGGTGGCCCCATCCCTGGCAAACGGTTGCGGGAGGGCATaGGGCCGTCCTCGTCGGCGT +
Preference number: 4 (lower is better)
Translates to: KTGTRSVGINPVAPSLANGCGRA*GRPRRR
Trigger: ACGCCGACGAGGACGGCCCCATGCCCTCCCGCAACC...GTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAACGCTCCGGGTGCCTGTCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp CCATCCCTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCACCGTGCCGTTCATCTaGCCCGTGGGCGGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: PSLANTCACPPDRGAECATVPFI*PVGGGG
Trigger: ACCACCGCCGCCCACGGGCCAGATGAACGGCACGGT...GGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAGGGATGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp AAGACAGGCACCCGGAGCGTTGGCATCAACCCGGTGGCCCCATCCCTGGCAAACGCGGCAGGCGGCGGGTaGTCCACCGTGCCGTTCATC +
Preference number: 4 (lower is better)
Translates to: KTGTRSVGINPVAPSLANAAGGG*STVPFI
Trigger: GATGAACGGCACGGTGGACCACCCGCCGCCTGCCGC...GTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAACGCTCCGGGTGCCTGTCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp TCCCTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGTCTGCAGGTGCTCGGTaGGCGTGTCATCCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: SLANTCACPPDRGAECARSAGAR*ACHPAG
Trigger: GCCCGCAGGATGACACGCTCACCGAGCACCTGCAGA...CCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp AGGGCGGACACCCGACTGTCCCGGCGTCTTCGGGAGGAGGGGACGGGGAAGGGGTTGCCGGAAGCTTCTTaGACATGGAGCCCAGGACCT +
Preference number: 4 (lower is better)
Translates to: RADTRLSRRLREEGTGKGLPEAS*TWSPGP
Trigger: AGGTCCTGGGCTCCATGTGCAAGAAGCTTCCGGCAA...CCCCTTCCCCGTCCCCTCCTCCCGAAGACGCCGGGACAGTCGGGTGTCCGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396720.7
CDS-3UTR GCA 90 bp ACACACAGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTGCCTGCGGGCACTGGCCCGGCAGCATGTaGTGGGCGGGGATGACGATG +
Preference number: 4 (lower is better)
Translates to: THRSRSWTCGCHTGACGHWPGSM*WAGMTM
Trigger: CATCGTCATCCCCGCCCAGCACATGCTGCCGGGCCA...GTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCTGTGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp CCATCCCTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCGTGGCAGAGGGCGGCTaGCCCAGGACGATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: PSLANTCACPPDRGAECAVAEGG*PRTIFS
Trigger: GGAGAAGATCGTCCTGGGGCAGCCGCCCTCTGCCAC...GGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAGGGATGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp GACAGGCACCCGGAGCGTTGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACACCCTCGGAAGAGGCTaGGATGGGGAGGCCGAGCGA +
Preference number: 4 (lower is better)
Translates to: DRHPERWHQPGGPIPGKHTLGRG*DGEAER
Trigger: TCGCTCGGCCTCCCCATCGCAGCCTCTTCCGAGGGT...GTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAACGCTCCGGGTGCCTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp ACACACAGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTGCCTGCGGGCACTGGGGGCCGGCTGGTTaGGCTCTGGGTTCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: THRSRSWTCGCHTGACGHWGPAG*ALGSGG
Trigger: ACCACCTGAACCCAGAGCCCAACCAGCCGGCCCCCA...GTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCTGTGTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp AGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAACCCGGTGGCCGGCCCACCACCTGGATaGGCGCCAGGCCCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: RSHTDKTGTRSVGINPVAGPPPG*APGPVW
Trigger: CCACACTGGGCCTGGCGCCCATCCAGGTGGTGGGCC...GGCCACCGGGTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp ACACAGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTGCCTGCGGGCACAGCCCGGCAGCATGTGCTaGGCGGGGATGACGATGCTG +
Preference number: 4 (lower is better)
Translates to: TQVTELDVRMSHGCLRAQPGSMC*AGMTML
Trigger: CAGCATCGTCATCCCCGCCCAGCACATGCTGCCGGG...CTGTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCTGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp GACAGGCACCCGGAGCGTTGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACGCTGGCCCACCTGGATaGGAGCGGCGGAGAGGATGT +
Preference number: 4 (lower is better)
Translates to: DRHPERWHQPGGPIPGKHAGPPG*ERRRGC
Trigger: ACATCCTCTCCGCCGCTCCCATCCAGGTGGGCCAGC...GTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAACGCTCCGGGTGCCTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACATGCGCGTGTCCCCCGGAAGCGACACGGGCATCTaGAAGAGCGCAGGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: WHQPGGPIPGKHMRVSPGSDTGI*KSAGWP
Trigger: GGGCCAGCCTGCGCTCTTCCAGATGCCCGTGTCGCT...TCCGGGGGACACGCGCATGTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp ACCCTCCACCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCCTGGCTGGCTCTGCGTaGGCAGGCTGCCCGCCGCCA +
Preference number: 4 (lower is better)
Translates to: TLHHLRSHTDKTGTRSVGLAGSA*AGCPPP
Trigger: TGGCGGCGGGCAGCCTGCCCACGCAGAGCCAGCCAG...GCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGGTGGAGGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp GCACCCGGAGCGTTGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACATGCGTGTGGGGCCCCTGGCTaGGTGGGAACTGGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: APGALASTRWPHPWQTHACGAPG*VGTGAG
Trigger: TCCAGCTCCAGTTCCCACCCAGCCAGGGGCCCCACA...CGCATGTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAACGCTCCGGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp ACACAGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTGCCTGCGGGCACAGAGAAGAGCCTTCGGCTaGGGCAGCGCTGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: TQVTELDVRMSHGCLRAQRRAFG*GSAGKG
Trigger: CCCCTTCCCAGCGCTGCCCCAGCCGAAGGCTCTTCT...CTGTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCTGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp GCTCGAGTCCCCAGGAGGCTGAGGGCGGACACCCGACTGTCCCGGCGTCTTCGGGGGTCGGGAGGTTGCTaGCAAAAGCCTTGTTCTCGG +
Preference number: 4 (lower is better)
Translates to: ARVPRRLRADTRLSRRLRGSGGC*QKPCSR
Trigger: CCGAGAACAAGGCTTTTGCCAGCAACCTCCCGACCC...CCGAAGACGCCGGGACAGTCGGGTGTCCGCCCTCAGCCTCCTGGGGACTCGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp AGGGCGGACACCCGACTGTCCCGGCGTCTTCGGGAGGAGGGGACGGGGAAGGGGTGCAGGACGGAGCCCTaGTGTTTGTGCAAATGCTCC +
Preference number: 4 (lower is better)
Translates to: RADTRLSRRLREEGTGKGCRTEP*CLCKCS
Trigger: GGAGCATTTGCACAAACACCAGGGCTCCGTCCTGCA...CCCCTTCCCCGTCCCCTCCTCCCGAAGACGCCGGGACAGTCGGGTGTCCGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACATGCGCGTGTCCCCCGGATGTCGCTGGAGAAGCTaGCCTGGTCCACGTCGGGCG +
Preference number: 4 (lower is better)
Translates to: WHQPGGPIPGKHMRVSPGCRWRS*PGPRRA
Trigger: CGCCCGACGTGGACCAGGCCAGCTTCTCCAGCGACA...TCCGGGGGACACGCGCATGTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp CTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGAAAAGCACGCTGGGAGGCTaGCTCCCCCACCCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: LANTCACPPDRGAECARKSTLGG*LPHPLS
Trigger: GGAGAGGGGGTGGGGGAGCCAGCCTCCCAGCGTGCT...TTTCCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp GAGGCTGAGGGCGGACACCCGACTGTCCCGGCGTCTTCGGGAGGAGGGGACGGGGCTACAAACGAATCATaGAGGGAAGGAGGGGCGTGT +
Preference number: 4 (lower is better)
Translates to: EAEGGHPTVPASSGGGDGATNES*REGGAC
Trigger: ACACGCCCCTCCTTCCCTTCATGATTCGTTTGTAGC...CCCGTCCCCTCCTCCCGAAGACGCCGGGACAGTCGGGTGTCCGCCCTCAGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396720.7
CDS-3UTR TCA 90 bp GACAGGCACCCGGAGCGTTGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACCCAGCGTCTGCTCCGTaGTGTTGGCCTCTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: DRHPERWHQPGGPIPGKHPASAP*CWPLGG
Trigger: GCCTCCAAGAGGCCAACATCACGGAGCAGACGCTGG...GTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAACGCTCCGGGTGCCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp AGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAACCCGGTGGCCCCTTCCCCGCCGCCATaGACGTCAGGTTCTGCGGGG +
Preference number: 4 (lower is better)
Translates to: RSHTDKTGTRSVGINPVAPSPPP*TSGSAG
Trigger: CCCCGCAGAACCTGACGTTCATGGCGGCGGGGAAGG...GGCCACCGGGTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp TCCCTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGTGGCCGGTGGCTGCTTaGAGACGTTCGCTTGCAGCG +
Preference number: 4 (lower is better)
Translates to: SLANTCACPPDRGAECARWPVAA*RRSLAA
Trigger: CGCTGCAAGCGAACGTCTTCAAGCAGCCACCGGCCA...CCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp TGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACATGCGCGTGTCCCCCGGATGTGCTGGGCGGGGATaGCGATGCTGCTGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: WHQPGGPIPGKHMRVSPGCAGRG*RCCCLG
Trigger: ACCAAGGCAGCAGCATCGTCATCCCCGCCCAGCACA...TCCGGGGGACACGCGCATGTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp ACACAGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTGCCTGCGGGCACAGGGATGGGGTTCGCGATaGGCTGTCCACCTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: TQVTELDVRMSHGCLRAQGWGSR*AVHLCG
Trigger: CCCACACAGGTGGACAGCTCATCGCGAACCCCATCC...CTGTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCTGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp CCTCCACCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATGGAGGCCCCGGGAGCTaGAGACGACAGGGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: PPPSEKPHRQDRHPERWHGGPGS*RRQGAV
Trigger: CACGGCCCCCTGTCGTCTTCAGCTCCCGGGGCCTCC...ATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGGTGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp CTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGAAACCGCCATCCGCAGGCTaGAGGGTGGGCAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LANTCACPPDRGAECARKPPSAG*RVGSWK
Trigger: CTTCCAGCTGCCCACCCTGCAGCCTGCGGATGGCGG...TTTCCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp AGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAACCCGGTGGCCCCGCTGACGGGCACCTaGTTGGCCAGGAGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: RSHTDKTGTRSVGINPVAPLTGT*LARSWE
Trigger: CTCCCAGCTCCTGGCCAAGCAGGTGCCCGTCAGCGG...GGCCACCGGGTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp CCTCCACCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATTCTGCGTGGGCAGGCTaGCCGCCGCCAGCGACACGG +
Preference number: 4 (lower is better)
Translates to: PPPSEKPHRQDRHPERWHSAWAG*PPPATR
Trigger: CCGTGTCGCTGGCGGCGGGCAGCCTGCCCACGCAGA...ATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGGTGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp ACCCTCCACCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCGAGGTGGGGGCCCTCTaGGGAGAGGGGCTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: TLHHLRSHTDKTGTRSVGEVGAL*GEGLLA
Trigger: AGCCAGCAGCCCCTCTCCGCAGAGGGCCCCCACCTC...GCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGGTGGAGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp GACAGGCACCCGGAGCGTTGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACGTCCCAGATGGGGCCTaGCCACTGACCAGCACAGAC +
Preference number: 4 (lower is better)
Translates to: DRHPERWHQPGGPIPGKHVPDGA*PLTSTD
Trigger: GTCTGTGCTGGTCAGTGGGCAGGCCCCATCTGGGAC...GTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAACGCTCCGGGTGCCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp CCATCCCTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCTCCAGGGCCGTGTTGTaGACGACCTTGCTGAGCCCG +
Preference number: 4 (lower is better)
Translates to: PSLANTCACPPDRGAECASRAVL*TTLLSP
Trigger: CGGGCTCAGCAAGGTCGTGCACAACACGGCCCTGGA...GGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAGGGATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp CCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAACCCAGTCGGGGTCCCCGGTaGCTTGGGCGGCGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: PSEKPHRQDRHPERWHQPSRGPR*LGRRWL
Trigger: CAGCCAGCGCCGCCCAAGGCACCGGGGACCCCGACT...GGGTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp GACAGGCACCCGGAGCGTTGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACCTGTCGATGGCGCTCTaGAGGTGCTCGGTGAGCGTG +
Preference number: 4 (lower is better)
Translates to: DRHPERWHQPGGPIPGKHLSMAL*RCSVSV
Trigger: CACGCTCACCGAGCACCTGCAGAGCGCCATCGACAG...GTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAACGCTCCGGGTGCCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TCCCTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGCACAGGGCCCCCAGCTaGGGACTTGGAAAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: SLANTCACPPDRGAECARHRAPS*GLGKGP
Trigger: AGGACCCTTTCCAAGTCCCCAGCTGGGGGCCCTGTG...CCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000396720.7
CDS-3UTR CCA 90 bp GGACGTGCGGATGTCACACGGGTGCCTGCGGGCACAGCACGCTGGGAGGCTGGCGTGATGTTGGCCTCTTaGAGGCTCTGCTGGAGGATG +
Preference number: 4 (lower is better)
Translates to: GRADVTRVPAGTARWEAGVMLAS*RLCWRM
Trigger: CATCCTCCAGCAGAGCCTCCAAGAGGCCAACATCAC...GCCAGCCTCCCAGCGTGCTGTGCCCGCAGGCACCCGTGTGACATCCGCACGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp ACCCTCCACCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCGGCTGGCCCACCACCTaGATGGGCGCCAGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: TLHHLRSHTDKTGTRSVGGWPTT*MGARPS
Trigger: ACTGGGCCTGGCGCCCATCCAGGTGGTGGGCCAGCC...GCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGGTGGAGGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp CCATCCCTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCTGCTTGGCCAGGAGCTaGGAGGTGGGCGTGTTGAGC +
Preference number: 4 (lower is better)
Translates to: PSLANTCACPPDRGAECACLARS*EVGVLS
Trigger: GCTCAACACGCCCACCTCCCAGCTCCTGGCCAAGCA...GGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAGGGATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp GACAGGCACCCGGAGCGTTGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACGCCGAGAGGTTCTTCTaGATGACCAGGCCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: DRHPERWHQPGGPIPGKHAERFF*MTRPAP
Trigger: GGGGGCTGGCCTGGTCATCCAGAAGAACCTCTCGGC...GTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAACGCTCCGGGTGCCTGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp ACACAGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTGCCTGCGGGCACAGGCCGAGAGGTTCTTCTaGATGACCAGGCCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: TQVTELDVRMSHGCLRAQAERFF*MTRPAP
Trigger: GGGGGCTGGCCTGGTCATCCAGAAGAACCTCTCGGC...CTGTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCTGTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TCCCTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGCGGGCGCAAACGGCTTaGGCGTCAGCTGGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: SLANTCACPPDRGAECARRAQTA*ASAGRA
Trigger: AGCTCTACCAGCTGACGCCCAAGCCGTTTGCGCCCG...CCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp ACCCTCCACCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCGACAGCACCACGTTCTaGCCCGCCTTCCCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: TLHHLRSHTDKTGTRSVGDSTTF*PAFPAA
Trigger: GGCGGCGGGGAAGGCGGGCCAGAACGTGGTGCTGTC...GCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGGTGGAGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp AAGACAGGCACCCGGAGCGTTGGCATCAACCCGGTGGCCCCATCCCTGGCAAACGGAGGTGGACGCTCATaGGTTTGCTCAGGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: KTGTRSVGINPVAPSLANGGGRS*VCSGPR
Trigger: CCGGGGCCCTGAGCAAACCCATGAGCGTCCACCTCC...GTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAACGCTCCGGGTGCCTGTCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGAAATAGCTGTCCACCTGTGTaGGGGGCAGCGGCCGCCAGG +
Preference number: 4 (lower is better)
Translates to: WQTHARVPRTEGQSVPGNSCPPV*GAAAAR
Trigger: CCTGGCGGCCGCTGCCCCCCACACAGGTGGACAGCT...ATTTCCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp AGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTGCCTGCGGGCACAGCACGGGGCCCGCCAGGTTCTaGTTTGTGAGGATGGGGTTC +
Preference number: 4 (lower is better)
Translates to: RSRSWTCGCHTGACGHSTGPARF*FVRMGF
Trigger: GAACCCCATCCTCACAAACCAGAACCTGGCGGGCCC...CGTGCTGTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp CCTCCACCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATTGCGCCTGCGGCTGCTaGAGGCCCAGGGGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: PPPSEKPHRQDRHPERWHCACGC*RPRGRG
Trigger: ACCCCTGCCCCTGGGCCTCCAGCAGCCGCAGGCGCA...ATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGGTGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp GCACCCGGAGCGTTGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACATGCGGGGGTGGTCACCATCTaGAAGGTCCGAGGAGGCGGT +
Preference number: 4 (lower is better)
Translates to: APGALASTRWPHPWQTHAGVVTI*KVRGGG
Trigger: ACCGCCTCCTCGGACCTTCCAGATGGTGACCACCCC...CGCATGTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAACGCTCCGGGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp GACAGGCACCCGGAGCGTTGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACGCGCTGGGAAGGGGGTaGTCACCATCTGGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: DRHPERWHQPGGPIPGKHALGRG*SPSGRS
Trigger: GGACCTTCCAGATGGTGACCACCCCCTTCCCAGCGC...GTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAACGCTCCGGGTGCCTGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp ACACACAGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTGCCTGCGGGCACCGGAGGAAGCGGCCTTaGCCACATTCAGGGTCGGGA +
Preference number: 4 (lower is better)
Translates to: THRSRSWTCGCHTGACGHRRKRP*PHSGSG
Trigger: TCCCGACCCTGAATGTGGCCAAGGCCGCTTCCTCCG...GTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCTGTGTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp AGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTGCCTGCGGGCACAGCACGGGATCACAAGCTTGGTaGGCAGGTGTGGAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: RSRSWTCGCHTGACGHSTGSQAW*AGVEGA
Trigger: AGCCCCCTCCACACCTGCCCACCAAGCTTGTGATCC...CGTGCTGTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TCCCTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGGCCGGATCACAAGCTTaGTGGGCAGGTGTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: SLANTCACPPDRGAECARAGSQA*WAGVEG
Trigger: CCCCTCCACACCTGCCCACCAAGCTTGTGATCCGGC...CCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp ACACACAGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTGCCTGCGGGCACGCCGGATCACAAGCTTaGTGGGCAGGTGTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: THRSRSWTCGCHTGACGHAGSQA*WAGVEG
Trigger: CCCCTCCACACCTGCCCACCAAGCTTGTGATCCGGC...GTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCTGTGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp AAGACAGGCACCCGGAGCGTTGGCATCAACCCGGTGGCCCCATCCCTGGCAAACCCTGCGGGCTGTCGCTaGAGAAGCTGGCCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: KTGTRSVGINPVAPSLANPAGCR*RSWPGP
Trigger: TGGACCAGGCCAGCTTCTCCAGCGACAGCCCGCAGG...GTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAACGCTCCGGGTGCCTGTCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp ACACACAGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTGCCTGCGGGCACCGGTGGCCCCATCCCTaGCAAACACATGCGCGTGTC +
Preference number: 4 (lower is better)
Translates to: THRSRSWTCGCHTGACGHRWPHP*QTHARV
Trigger: GACACGCGCATGTGTTTGCCAGGGATGGGGCCACCG...GTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCTGTGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp ACACAGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTGCCTGCGGGCACAGTGTTTGACAGCCTGTTaGGGGCGGCGGGGAGAGGCT +
Preference number: 4 (lower is better)
Translates to: TQVTELDVRMSHGCLRAQCLTAC*GRRGEA
Trigger: AGCCTCTCCCCGCCGCCCCCAACAGGCTGTCAAACA...CTGTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCTGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp ACCCTCCACCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCAGCACGCTGGGAGGCTaGCTCCCCCACCCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: TLHHLRSHTDKTGTRSVGSTLGG*LPHPLS
Trigger: GGAGAGGGGGTGGGGGAGCCAGCCTCCCAGCGTGCT...GCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGGTGGAGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp ACACACAGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTGCCTGCGGGCACACACAGAGTTCCCATTaGGCGTGGTGGCCACAGCGG +
Preference number: 4 (lower is better)
Translates to: THRSRSWTCGCHTGACGHTQSSH*AWWPQR
Trigger: CCGCTGTGGCCACCACGCTCAATGGGAACTCTGTGT...GTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCTGTGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp CACCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAACGGCCGTCGGGGGTGTTaGGCATGGCCACGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: HHLRSHTDKTGTRSVGINGRRGC*AWPRRW
Trigger: CCAGCGCCGTGGCCATGCTCAACACCCCCGACGGCC...GTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp ACACAGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTGCCTGCGGGCACAGCCGGACGGCACCTGGTaGAATCTCTCGAGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: TQVTELDVRMSHGCLRAQPDGTW*NLSRRA
Trigger: GGCTCTTCTCGAGAGATTTCACCAGGTGCCGTCCGG...CTGTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCTGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp CACCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAACCCGCCAGCTCGCGGATaGGCCCGCTGGTGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: HHLRSHTDKTGTRSVGINPPARG*ARWWPR
Trigger: ACGAGGCCACCAGCGGGCTCATCCGCGAGCTGGCGG...GTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp TGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGAAATGCGGCGGGGAGAGGCTaGGACTGTCTGGAAGGACCC +
Preference number: 4 (lower is better)
Translates to: WQTHARVPRTEGQSVPGNAAGRG*DCLEGP
Trigger: GGGTCCTTCCAGACAGTCTCAGCCTCTCCCCGCCGC...ATTTCCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp TGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACATGCGCGTGTCCCCCGGATCGGCCTCCAGCGTCTaGTCCGTGATGTTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: WHQPGGPIPGKHMRVSPGSASSV*SVMLAS
Trigger: AGAGGCCAACATCACGGAGCAGACGCTGGAGGCCGA...TCCGGGGGACACGCGCATGTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp GCACCCGGAGCGTTGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACATGCGGCTGCAGTGTCACATTaGCCAGGCCCACAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: APGALASTRWPHPWQTHAAAVSH*PGPQAA
Trigger: TGCAGCCTGTGGGCCTGGGCAATGTGACACTGCAGC...CGCATGTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAACGCTCCGGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp CCTCCACCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATGAGGTGGGGGCCCTCTaGGGAGAGGGGCTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: PPPSEKPHRQDRHPERWHEVGAL*GEGLLA
Trigger: AGCCAGCAGCCCCTCTCCGCAGAGGGCCCCCACCTC...ATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGGTGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp TGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGAAATCCGCCTGCCCCGCCGTaGCGGATCACAAGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: WQTHARVPRTEGQSVPGNPPAPP*RITSLV
Trigger: CACCAAGCTTGTGATCCGGCACGGCGGGGCAGGCGG...ATTTCCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp TGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGAAATTCTCGCGGTAGGTCTTaGGCAGTGGCAGGCGCGGGC +
Preference number: 4 (lower is better)
Translates to: WQTHARVPRTEGQSVPGNSRGRS*AVAGAG
Trigger: GCCCGCGCCTGCCACTGCGCAAGACCTACCGCGAGA...ATTTCCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp ACACAGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTGCCTGCGGGCACAGGTGAGCGTGTCATCCTaGGGGCTGTCGCTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: TQVTELDVRMSHGCLRAQVSVSS*GLSLEK
Trigger: CTTCTCCAGCGACAGCCCGCAGGATGACACGCTCAC...CTGTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCTGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp CCATCCCTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCGTGAGCGTGTCATCCTaGGGGCTGTCGCTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: PSLANTCACPPDRGAECAVSVSS*GLSLEK
Trigger: CTTCTCCAGCGACAGCCCGCAGGATGACACGCTCAC...GGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAGGGATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp CCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAACCCGGGGGCCAGCCTAGCTaGTCTCCGTCGAGCCACGGC +
Preference number: 4 (lower is better)
Translates to: PSEKPHRQDRHPERWHQPGGQPS*SPSSHG
Trigger: GCCGTGGCTCGACGGAGACCAGCTAGGCTGGCCCCC...GGGTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396720.7
CDS-3UTR CCA 90 bp AGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAACCCGGTGGCCAGGATGTCACAGGGCTaGTCAGCGCCCCCACTGCCC +
Preference number: 4 (lower is better)
Translates to: RSHTDKTGTRSVGINPVARMSQG*SAPPLP
Trigger: GGGCAGTGGGGGCGCTGACCAGCCCTGTGACATCCT...GGCCACCGGGTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp CTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGAAATTGTTGACCACGTCCTaGGGCGGCACCAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LANTCACPPDRGAECARKLLTTS*GGTRAW
Trigger: CCAGGCCCTGGTGCCGCCCCAGGACGTGGTCAACAA...TTTCCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp CCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAACCCGGCCCACCACCTGGATaGGCGCCAGGCCCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: PSEKPHRQDRHPERWHQPGPPPG*APGPVW
Trigger: CCACACTGGGCCTGGCGCCCATCCAGGTGGTGGGCC...GGGTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACATGCGCGTGTCCCCCGGACCAGGCAGTAGGAACTaGTTCTGGCCCGGCAGCATG +
Preference number: 4 (lower is better)
Translates to: WHQPGGPIPGKHMRVSPGPGSRN*FWPGSM
Trigger: CATGCTGCCGGGCCAGAACCAGTTCCTACTGCCTGG...TCCGGGGGACACGCGCATGTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TCCCTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGCCAGGCAGTAGGAACTaGTTCTGGCCCGGCAGCATG +
Preference number: 4 (lower is better)
Translates to: SLANTCACPPDRGAECARPGSRN*FWPGSM
Trigger: CATGCTGCCGGGCCAGAACCAGTTCCTACTGCCTGG...CCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACATGCGCGTGTCCCCCGGAGGGCCCGCCAGGTTCTaGTTTGTGAGGATGGGGTTC +
Preference number: 4 (lower is better)
Translates to: WHQPGGPIPGKHMRVSPGGPARF*FVRMGF
Trigger: GAACCCCATCCTCACAAACCAGAACCTGGCGGGCCC...TCCGGGGGACACGCGCATGTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGGAGGCAGGAAGAACAGAGGGGGCAGGGTGACCCCCTaGAGGACAGTGGTGGCGGCC +
Preference number: 4 (lower is better)
Translates to: SPRFQNLARAAGGRKNRGGRVTP*RTVVAA
Trigger: GGCCGCCACCACTGTCCTCCAGGGGGTCACCCTGCC...CCCTCTGTTCTTCCTGCCTCCAGCCGCCCGCGCCAGATTTTGAAATCTCGGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp CCATCCCTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCGAGCTGGAAGTCGGATaGCGTAGGGGCTGGCAACCT +
Preference number: 4 (lower is better)
Translates to: PSLANTCACPPDRGAECAELEVG*RRGWQP
Trigger: AGGTTGCCAGCCCCTACGCCATCCGACTTCCAGCTC...GGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAGGGATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TCCCTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGGGTGGGAACTGGAGCTaGAAGTCGGATGGCGTAGGG +
Preference number: 4 (lower is better)
Translates to: SLANTCACPPDRGAECARGGNWS*KSDGVG
Trigger: CCCTACGCCATCCGACTTCCAGCTCCAGTTCCCACC...CCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp GACAGGCACCCGGAGCGTTGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACAGCCTTGTTCTCGGCTaGAAGCAGAGGAGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: DRHPERWHQPGGPIPGKHSLVLG*KQRREA
Trigger: GGCCTCCCTCCTCTGCTTCCAGCCGAGAACAAGGCT...GTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAACGCTCCGGGTGCCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp CCAGCAACCCAGCTGAAGCAGGCGGCAGGGAAGGAGGCCTTTGTGACTCAAATATGGCCTCGTCCACTTTaGCGGGCAGCGGCGCCGGGC +
Preference number: 4 (lower is better)
Translates to: PATQLKQAAGKEAFVTQIWPRPL*RAAAPG
Trigger: GCCCGGCGCCGCTGCCCGCCAAAGTGGACGAGGCCA...TATTTGAGTCACAAAGGCCTCCTTCCCTGCCGCCTGCTTCAGCTGGGTTGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACATGCGCGTGTCCCCCGGATCAGGATGCTGTCGATaGCGCTCTGCAGGTGCTCGG +
Preference number: 4 (lower is better)
Translates to: WHQPGGPIPGKHMRVSPGSGCCR*RSAGAR
Trigger: CCGAGCACCTGCAGAGCGCCATCGACAGCATCCTGA...TCCGGGGGACACGCGCATGTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp AGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTGCCTGCGGGCACAGCACGTTGGCATCAACCCGGTaGCCCCATCCCTGGCAAACA +
Preference number: 4 (lower is better)
Translates to: RSRSWTCGCHTGACGHSTLASTR*PHPWQT
Trigger: TGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAA...CGTGCTGTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp AGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTGCCTGCGGGCACAGCACGCGAGATTTCAAAATCTaGCGCGGGCGGCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: RSRSWTCGCHTGACGHSTRDFKI*RGRLEA
Trigger: TGCCTCCAGCCGCCCGCGCCAGATTTTGAAATCTCG...CGTGCTGTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp TCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGGAGGCAGGAAGAACAGAGGGGCAGGGAGTCCTGAGTaGGGATGGCCGTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: SPRFQNLARAAGGRKNRGAGSPE*GWPWGW
Trigger: CCACCCCCACGGCCATCCTCACTCAGGACTCCCTGC...CCCTCTGTTCTTCCTGCCTCCAGCCGCCCGCGCCAGATTTTGAAATCTCGGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp GCACCCGGAGCGTTGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACATGCGCCTTGTTCTGGAGGATaGTTCCGGACGGCACCTGGT +
Preference number: 4 (lower is better)
Translates to: APGALASTRWPHPWQTHAPCSGG*FRTAPG
Trigger: ACCAGGTGCCGTCCGGAATCATCCTCCAGAACAAGG...CGCATGTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAACGCTCCGGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp CCTCCACCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATATGGGGCCTGCCCACTaGCCAGCACAGACGCAGCGG +
Preference number: 4 (lower is better)
Translates to: PPPSEKPHRQDRHPERWHMGPAH*PAQTQR
Trigger: CCGCTGCGTCTGTGCTGGTCAGTGGGCAGGCCCCAT...ATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGGTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp CCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAACCCTGGCCGGGAAGCCGATaGCCCTCGGAAGAGGCTGCG +
Preference number: 4 (lower is better)
Translates to: PSEKPHRQDRHPERWHQPWPGSR*PSEEAA
Trigger: CGCAGCCTCTTCCGAGGGTCATCGGCTTCCCGGCCA...GGGTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp CCTCCACCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCCCCAGCAACCCAGCTaGAGCAGGCGGCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: PPPSEKPHRQDRHPERWHPQQPS*SRRQGR
Trigger: CCTTCCCTGCCGCCTGCTTCAGCTGGGTTGCTGGGG...ATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGGTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp ACACAGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTGCCTGCGGGCACAGTGGAGCCCAGGAGTTTaGGGCTGCAGAGTGGAGCTA +
Preference number: 4 (lower is better)
Translates to: TQVTELDVRMSHGCLRAQWSPGV*GCRVEL
Trigger: TAGCTCCACTCTGCAGCCTCAAACTCCTGGGCTCCA...CTGTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCTGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614245.2
CDS-3UTR GCA 90 bp CTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGAAAAGGCCCGGGATGGGCTaGAGTGTCACATTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LANTCACPPDRGAECARKRPGMG*SVTLPR
Trigger: CCTGGGCAATGTGACACTGCAGCCCATCCCGGGCCT...TTTCCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp TGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGAAATTGGCCCGGCAGCATGTaGTGGGCGGGGATGACGATG +
Preference number: 4 (lower is better)
Translates to: WQTHARVPRTEGQSVPGNWPGSM*WAGMTM
Trigger: CATCGTCATCCCCGCCCAGCACATGCTGCCGGGCCA...ATTTCCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp CCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAACCCTCTCGCGGTAGGTCTTaGGCAGTGGCAGGCGCGGGC +
Preference number: 4 (lower is better)
Translates to: PSEKPHRQDRHPERWHQPSRGRS*AVAGAG
Trigger: GCCCGCGCCTGCCACTGCGCAAGACCTACCGCGAGA...GGGTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp CCAGCAACCCAGCTGAAGCAGGCGGCAGGGAAGGAGGCCTTTGTGACTCAAATACGGGCGACTCGGACTTaGGCCGCTTGGCAGGGGGCA +
Preference number: 4 (lower is better)
Translates to: PATQLKQAAGKEAFVTQIRATRT*AAWQGA
Trigger: TGCCCCCTGCCAAGCGGCGCAAGTCCGAGTCGCCCG...TATTTGAGTCACAAAGGCCTCCTTCCCTGCCGCCTGCTTCAGCTGGGTTGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp CCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAACCCCGGCCGGGGGCCTGCTaGAGGTTCAGGATGCTGTCG +
Preference number: 4 (lower is better)
Translates to: PSEKPHRQDRHPERWHQPRPGAC*RFRMLS
Trigger: CGACAGCATCCTGAACCTGCAGCAGGCCCCCGGCCG...GGGTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp TGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGAAATTGTCACACGGGTGCCTaGGGGCACAGCACGCTGGGA +
Preference number: 4 (lower is better)
Translates to: WQTHARVPRTEGQSVPGNCHTGA*GHSTLG
Trigger: TCCCAGCGTGCTGTGCCCGCAGGCACCCGTGTGACA...ATTTCCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp CTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGAAACCCCAGCTGGGGACTTaGAAAGGGTCCTCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: LANTCACPPDRGAECARKPQLGT*KGSSWG
Trigger: CCCCCAAGAGGACCCTTTCCAAGTCCCCAGCTGGGG...TTTCCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000396720.7
CDS-3UTR CCA 90 bp TGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGAAATAGGATGTCACAGGGCTaGTCAGCGCCCCCACTGCCC +
Preference number: 4 (lower is better)
Translates to: WQTHARVPRTEGQSVPGNRMSQG*SAPPLP
Trigger: GGGCAGTGGGGGCGCTGACCAGCCCTGTGACATCCT...ATTTCCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp CACCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAACGGCTGGCCCACCACCTaGATGGGCGCCAGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: HHLRSHTDKTGTRSVGINGWPTT*MGARPS
Trigger: ACTGGGCCTGGCGCCCATCCAGGTGGTGGGCCAGCC...GTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGAAATCCCGGCAGCATGTGCTaGGCGGGGATGACGATGCTG +
Preference number: 4 (lower is better)
Translates to: WQTHARVPRTEGQSVPGNPGSMC*AGMTML
Trigger: CAGCATCGTCATCCCCGCCCAGCACATGCTGCCGGG...ATTTCCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGGAGGCAGGAAGAACAGAGGGTCTGCCCGCCCACGTTaGCCGGCAGGGCTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: SPRFQNLARAAGGRKNRGSARPR*PAGLRA
Trigger: AGCTCTCAGCCCTGCCGGCCAACGTGGGCGGGCAGA...CCCTCTGTTCTTCCTGCCTCCAGCCGCCCGCGCCAGATTTTGAAATCTCGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp CACCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAACGCAGGCTGGCCCACCTaGATGGGAGCGGCGGAGAGG +
Preference number: 4 (lower is better)
Translates to: HHLRSHTDKTGTRSVGINAGWPT*MGAAER
Trigger: CCTCTCCGCCGCTCCCATCCAGGTGGGCCAGCCTGC...GTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp GCTCGAGTCCCCAGGAGGCTGAGGGCGGACACCCGACTGTCCCGGCGTCTTCGGGGGGGAACGCCTAGCTaGTTTTGGATGACAAAGATG +
Preference number: 4 (lower is better)
Translates to: ARVPRRLRADTRLSRRLRGGTPS*FWMTKM
Trigger: CATCTTTGTCATCCAAAACCAGCTAGGCGTTCCCCC...CCGAAGACGCCGGGACAGTCGGGTGTCCGCCCTCAGCCTCCTGGGGACTCGAGC
63% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TCCCTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGGGGTCGGGAGGTTGCTaGCAAAAGCCTTGTTCTCGG +
Preference number: 4 (lower is better)
Translates to: SLANTCACPPDRGAECARGSGGC*QKPCSR
Trigger: CCGAGAACAAGGCTTTTGCCAGCAACCTCCCGACCC...CCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp CTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGAAATGCTGGGCTGAAGCGTaGGGGGCTTCTTCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: LANTCACPPDRGAECARKCWAEA*GASSGH
Trigger: GTGGCCTGAAGAAGCCCCCCACGCTTCAGCCCAGCA...TTTCCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp CACCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAACGCGGCAGGCGGCGGGTaGTCCACCGTGCCGTTCATC +
Preference number: 4 (lower is better)
Translates to: HHLRSHTDKTGTRSVGINAAGGG*STVPFI
Trigger: GATGAACGGCACGGTGGACCACCCGCCGCCTGCCGC...GTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGGAGGCAGGAAGAACAGAGGGGTAGGTCTTGCGCAGTaGCAGGCGCGGGCAGTGCGG +
Preference number: 4 (lower is better)
Translates to: SPRFQNLARAAGGRKNRGVGLAQ*QARAVR
Trigger: CCGCACTGCCCGCGCCTGCCACTGCGCAAGACCTAC...CCCTCTGTTCTTCCTGCCTCCAGCCGCCCGCGCCAGATTTTGAAATCTCGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp CCTCCACCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATGTAGGTCTTGCGCAGTaGCAGGCGCGGGCAGTGCGG +
Preference number: 4 (lower is better)
Translates to: PPPSEKPHRQDRHPERWHVGLAQ*QARAVR
Trigger: CCGCACTGCCCGCGCCTGCCACTGCGCAAGACCTAC...ATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGGTGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp GCACCCGGAGCGTTGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACATGCGCCCTTCAGCATACGCTaGTACAGCTCGTCCTCCACG +
Preference number: 4 (lower is better)
Translates to: APGALASTRWPHPWQTHAPFSIR*YSSSST
Trigger: CGTGGAGGACGAGCTGTACCAGCGTATGCTGAAGGG...CGCATGTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAACGCTCCGGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp ACCCTCCACCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCGGCCACCGTTGTGACTaGAGGGTGGGTAGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: TLHHLRSHTDKTGTRSVGGHRCD*RVGRPR
Trigger: CCGAGGCCTACCCACCCTCCAGTCACAACGGTGGCC...GCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGGTGGAGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp GACAGGCACCCGGAGCGTTGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACTTGGCATCAACCCGGTaGCCCCATCCCTGGCAAACA +
Preference number: 4 (lower is better)
Translates to: DRHPERWHQPGGPIPGKHLASTR*PHPWQT
Trigger: TGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAA...GTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAACGCTCCGGGTGCCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp CCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAACCCAGGCACCCGGAGCGTTaGCATCAACCCGGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: PSEKPHRQDRHPERWHQPRHPER*HQPGGP
Trigger: GGGGCCACCGGGTTGATGCCAACGCTCCGGGTGCCT...GGGTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp GCTCGAGTCCCCAGGAGGCTGAGGGCGGACACCCGACTGTCCCGGCGTCTTCGGTTCAAAGTCGAGGGGTaGGCGTTCGAAATCTCTCAC +
Preference number: 4 (lower is better)
Translates to: ARVPRRLRADTRLSRRLRFKVEG*AFEISH
Trigger: GTGAGAGATTTCGAACGCCCACCCCTCGACTTTGAA...CCGAAGACGCCGGGACAGTCGGGTGTCCGCCCTCAGCCTCCTGGGGACTCGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACATGCGCGTGTCCCCCGGAAGAGGGAAGACTAGCTaGGGAGAGGTTCGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: WHQPGGPIPGKHMRVSPGRGKTS*GEVRGR
Trigger: TCTCCCCCGAACCTCTCCCCAGCTAGTCTTCCCTCT...TCCGGGGGACACGCGCATGTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACATGCGCGTGTCCCCCGGACGAGATTTCAAAATCTaGCGCGGGCGGCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: WHQPGGPIPGKHMRVSPGRDFKI*RGRLEA
Trigger: TGCCTCCAGCCGCCCGCGCCAGATTTTGAAATCTCG...TCCGGGGGACACGCGCATGTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp CCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAACCCCACTCAGGGCCTTGTTaGCCACGTCCTGGGGCGGCA +
Preference number: 4 (lower is better)
Translates to: PSEKPHRQDRHPERWHQPHSGPC*PRPGAA
Trigger: TGCCGCCCCAGGACGTGGTCAACAAGGCCCTGAGTG...GGGTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp CCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAACCCGTGCAAGGGTGGCTCTaGGGGAGGGCGGGACACACT +
Preference number: 4 (lower is better)
Translates to: PSEKPHRQDRHPERWHQPVQGWL*GRAGHT
Trigger: AGTGTGTCCCGCCCTCCCTCAGAGCCACCCTTGCAC...GGGTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp AGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAACCCGGTGGCCCCGGACGGCACCTGGTaGAATCTCTCGAGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: RSHTDKTGTRSVGINPVAPDGTW*NLSRRA
Trigger: GGCTCTTCTCGAGAGATTTCACCAGGTGCCGTCCGG...GGCCACCGGGTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp CTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGAAACTCTCCGGTTTTGTTTaGCAGCCTGTTGGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: LANTCACPPDRGAECARKLSGFV*QPVGGG
Trigger: GCCGCCCCCAACAGGCTGTCAAACAAAACCGGAGAG...TTTCCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp TCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGGAGGCAGGAAGAACAGAGGGCCCAGGCCCACAGGCTaGAGGAAGGGCTGCACACTC +
Preference number: 4 (lower is better)
Translates to: SPRFQNLARAAGGRKNRGPRPTG*RKGCTL
Trigger: GAGTGTGCAGCCCTTCCTGCAGCCTGTGGGCCTGGG...CCCTCTGTTCTTCCTGCCTCCAGCCGCCCGCGCCAGATTTTGAAATCTCGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp CCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAACCCCCCAGGCCCACAGGCTaGAGGAAGGGCTGCACACTC +
Preference number: 4 (lower is better)
Translates to: PSEKPHRQDRHPERWHQPPRPTG*RKGCTL
Trigger: GAGTGTGCAGCCCTTCCTGCAGCCTGTGGGCCTGGG...GGGTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp CCAGCAACCCAGCTGAAGCAGGCGGCAGGGAAGGAGGCCTTTGTGACTCAAATACCGCTGACGGGCACCTaGTTGGCCAGGAGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: PATQLKQAAGKEAFVTQIPLTGT*LARSWE
Trigger: CTCCCAGCTCCTGGCCAAGCAGGTGCCCGTCAGCGG...TATTTGAGTCACAAAGGCCTCCTTCCCTGCCGCCTGCTTCAGCTGGGTTGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp ACACAGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTGCCTGCGGGCACAGGTGCGTTTCAGCAGCTaGGTGGAGACCGTCTCAAAC +
Preference number: 4 (lower is better)
Translates to: TQVTELDVRMSHGCLRAQVRFSS*VETVSN
Trigger: GTTTGAGACGGTCTCCACGCAGCTGCTGAAACGCAC...CTGTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCTGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp CTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGAAAATGGCGCTCTGCAGGTaGTCGGTGAGCGTGTCATCC +
Preference number: 4 (lower is better)
Translates to: LANTCACPPDRGAECARKMALCR*SVSVSS
Trigger: GGATGACACGCTCACCGAGCACCTGCAGAGCGCCAT...TTTCCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp CCATCCCTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCACTGACACAGCACTTTaGCCCTCCTTTGGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: PSLANTCACPPDRGAECATDTAL*PSFGRG
Trigger: TCCCCTGCCAAAGGAGGGGCAAAGTGCTGTGTCAGT...GGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAGGGATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp GCTCGAGTCCCCAGGAGGCTGAGGGCGGACACCCGACTGTCCCGGCGTCTTCGGTCTCTCACTCACTTGTaGACACACACACACACACAG +
Preference number: 4 (lower is better)
Translates to: ARVPRRLRADTRLSRRLRSLTHL*THTHTQ
Trigger: CTGTGTGTGTGTGTGTGTGCACAAGTGAGTGAGAGA...CCGAAGACGCCGGGACAGTCGGGTGTCCGCCCTCAGCCTCCTGGGGACTCGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGGAGGCAGGAAGAACAGAGGGTGGGGGCCGGCTGGTTaGGCTCTGGGTTCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: SPRFQNLARAAGGRKNRGWGPAG*ALGSGG
Trigger: ACCACCTGAACCCAGAGCCCAACCAGCCGGCCCCCA...CCCTCTGTTCTTCCTGCCTCCAGCCGCCCGCGCCAGATTTTGAAATCTCGGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp AAGACAGGCACCCGGAGCGTTGGCATCAACCCGGTGGCCCCATCCCTGGCAAACTCTTGGAGGCTCTGCTaGAGGATGTCACAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: KTGTRSVGINPVAPSLANSWRLC*RMSQGW
Trigger: CCAGCCCTGTGACATCCTCCAGCAGAGCCTCCAAGA...GTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAACGCTCCGGGTGCCTGTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TCCCTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGGTGATGTTGGCCTCTTaGAGGCTCTGCTGGAGGATG +
Preference number: 4 (lower is better)
Translates to: SLANTCACPPDRGAECARVMLAS*RLCWRM
Trigger: CATCCTCCAGCAGAGCCTCCAAGAGGCCAACATCAC...CCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGAAATCGGGCGCAAACGGCTTaGGCGTCAGCTGGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: WQTHARVPRTEGQSVPGNRAQTA*ASAGRA
Trigger: AGCTCTACCAGCTGACGCCCAAGCCGTTTGCGCCCG...ATTTCCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACATGCGCGTGTCCCCCGGACCTTGGTTCAGGAGGTaGACGCTCATGGGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: WHQPGGPIPGKHMRVSPGPWFRR*TLMGLL
Trigger: GAGCAAACCCATGAGCGTCCACCTCCTGAACCAAGG...TCCGGGGGACACGCGCATGTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp CCTCCACCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATGCTGGCCCACCTGGATaGGAGCGGCGGAGAGGATGT +
Preference number: 4 (lower is better)
Translates to: PPPSEKPHRQDRHPERWHAGPPG*ERRRGC
Trigger: ACATCCTCTCCGCCGCTCCCATCCAGGTGGGCCAGC...ATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGGTGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp CCAGCAACCCAGCTGAAGCAGGCGGCAGGGAAGGAGGCCTTTGTGACTCAAATACTTTGGCGACGGGGGTaGCTGGGGCTGGGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: PATQLKQAAGKEAFVTQILWRRG*LGLGLG
Trigger: CCCAAGACCCAGCCCCAGCCACCCCCGTCGCCAAAG...TATTTGAGTCACAAAGGCCTCCTTCCCTGCCGCCTGCTTCAGCTGGGTTGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGGAGGCAGGAAGAACATCAGGCGGCTGGGACTaGGGGCGGAGAGGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: FCLRDFKIWRGRLEAGRTSGGWD*GRRGGC
Trigger: GCAGCCGCCTCTCCGCCCCCAGTCCCAGCCGCCTGA...TGTTCTTCCTGCCTCCAGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGAAATGGATGGCGTAGGGGCTaGCAACCTGGAGGACGTCTC +
Preference number: 4 (lower is better)
Translates to: WQTHARVPRTEGQSVPGNGWRRG*QPGGRL
Trigger: GAGACGTCCTCCAGGTTGCCAGCCCCTACGCCATCC...ATTTCCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGGAGGCAGGAAGAACAGAGGGTGTGGGGCCCCTGGCTaGGTGGGAACTGGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: SPRFQNLARAAGGRKNRGCGAPG*VGTGAG
Trigger: TCCAGCTCCAGTTCCCACCCAGCCAGGGGCCCCACA...CCCTCTGTTCTTCCTGCCTCCAGCCGCCCGCGCCAGATTTTGAAATCTCGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp CCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAACCCGACTTGTGGGGCCCCTaGCTGGGTGGGAACTGGAGC +
Preference number: 4 (lower is better)
Translates to: PSEKPHRQDRHPERWHQPDLWGP*LGGNWS
Trigger: GCTCCAGTTCCCACCCAGCCAGGGGCCCCACAAGTC...GGGTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGAAATGGGGTGGTCACCATCTaGAAGGTCCGAGGAGGCGGT +
Preference number: 4 (lower is better)
Translates to: WQTHARVPRTEGQSVPGNGVVTI*KVRGGG
Trigger: ACCGCCTCCTCGGACCTTCCAGATGGTGACCACCCC...ATTTCCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp CACCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAACCGGCTGGGGCAGCGCTaGGAAGGGGGTGGTCACCAT +
Preference number: 4 (lower is better)
Translates to: HHLRSHTDKTGTRSVGINRLGQR*EGGGHH
Trigger: ATGGTGACCACCCCCTTCCCAGCGCTGCCCCAGCCG...GTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGGAGGCAGGAAGAACAGAGGAGGGAGGCCTGTaGCGGCCATGGGTGCCGGGG +
Preference number: 4 (lower is better)
Translates to: FCLRDFKIWRGRLEAGRTEEGGL*RPWVPG
Trigger: CCCCGGCACCCATGGCCGCCACAGGCCTCCCTCCTC...TGTTCTTCCTGCCTCCAGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp ACACACAGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTGCCTGCGGGCACCGTCCGGCTTCTCCTTaGCCAGCTGTTTATCCAAGG +
Preference number: 4 (lower is better)
Translates to: THRSRSWTCGCHTGACGHRPASP*PAVYPR
Trigger: CCTTGGATAAACAGCTGGCCAAGGAGAAGCCGGACG...GTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCTGTGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp CTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGAAAGGATCACAAGCTTGGTaGGCAGGTGTGGAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: LANTCACPPDRGAECARKGSQAW*AGVEGA
Trigger: AGCCCCCTCCACACCTGCCCACCAAGCTTGTGATCC...TTTCCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp CCTCCACCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCTGGAGAAGCTGGCCTaGTCCACGTCGGGCGACTCG +
Preference number: 4 (lower is better)
Translates to: PPPSEKPHRQDRHPERWHLEKLA*STSGDS
Trigger: CGAGTCGCCCGACGTGGACCAGGCCAGCTTCTCCAG...ATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGGTGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGGAGGCAGGAAGAACAGAGGGTGTCGCTGGAGAAGCTaGCCTGGTCCACGTCGGGCG +
Preference number: 4 (lower is better)
Translates to: SPRFQNLARAAGGRKNRGCRWRS*PGPRRA
Trigger: CGCCCGACGTGGACCAGGCCAGCTTCTCCAGCGACA...CCCTCTGTTCTTCCTGCCTCCAGCCGCCCGCGCCAGATTTTGAAATCTCGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGGAGGCAGGAAGAACAGAGGGGGCCACCGTTGTGACTaGAGGGTGGGTAGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: SPRFQNLARAAGGRKNRGGHRCD*RVGRPR
Trigger: CCGAGGCCTACCCACCCTCCAGTCACAACGGTGGCC...CCCTCTGTTCTTCCTGCCTCCAGCCGCCCGCGCCAGATTTTGAAATCTCGGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp CCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAACCCTCTGGCGCGGGCGGCTaGAGGCAGGAAGAACAGAGG +
Preference number: 4 (lower is better)
Translates to: PSEKPHRQDRHPERWHQPSGAGG*RQEEQR
Trigger: CCTCTGTTCTTCCTGCCTCCAGCCGCCCGCGCCAGA...GGGTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp GCACCCGGAGCGTTGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACATGCGGAAGCTTCTTGCACATaGAGCTGCAGGCCGGGAAAG +
Preference number: 4 (lower is better)
Translates to: APGALASTRWPHPWQTHAEASCT*SCRPGK
Trigger: CTTTCCCGGCCTGCAGCTCCATGTGCAAGAAGCTTC...CGCATGTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAACGCTCCGGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614245.2
CDS-3UTR TCA 90 bp ACACAGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTGCCTGCGGGCACAGGGAGCCGATATTTATTaGGCATGGCCTGGGTGCGTT +
Preference number: 4 (lower is better)
Translates to: TQVTELDVRMSHGCLRAQGADIY*AWPGCV
Trigger: AACGCACCCAGGCCATGCTCAATAAATATCGGCTCC...CTGTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp CCTCCACCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCATTACCATCTCCGCTaGGGGGCTCACCCTCCGGGA +
Preference number: 4 (lower is better)
Translates to: PPPSEKPHRQDRHPERWHHYHLR*GAHPPG
Trigger: TCCCGGAGGGTGAGCCCCTCAGCGGAGATGGTAATG...ATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGGTGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp AAGACAGGCACCCGGAGCGTTGGCATCAACCCGGTGGCCCCATCCCTGGCAAACTTGAGCCAAAGAGTTTaGGACCAGCCTGGGCAACGC +
Preference number: 4 (lower is better)
Translates to: KTGTRSVGINPVAPSLANLSQRV*DQPGQR
Trigger: GCGTTGCCCAGGCTGGTCTCAAACTCTTTGGCTCAA...GTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAACGCTCCGGGTGCCTGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614245.2
CDS-3UTR GCA 90 bp ACACAGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTGCCTGCGGGCACAGCTGGGTTCAGGTGGTTaGCGGAAGCTTCTTGCACAT +
Preference number: 4 (lower is better)
Translates to: TQVTELDVRMSHGCLRAQLGSGG*RKLLAH
Trigger: ATGTGCAAGAAGCTTCCGGCAACCACCTGAACCCAG...CTGTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp CCTCCACCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATAGGCCCGGGATGGGCTaGAGTGTCACATTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PPPSEKPHRQDRHPERWHRPGMG*SVTLPR
Trigger: CCTGGGCAATGTGACACTGCAGCCCATCCCGGGCCT...ATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGGTGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp TCCCTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGTCAGGGTCGGGAGGTTaGTGGCAAAAGCCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: SLANTCACPPDRGAECARSGSGG*WQKPCS
Trigger: AGAACAAGGCTTTTGCCAGCAACCTCCCGACCCTGA...CCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp AAGACAGGCACCCGGAGCGTTGGCATCAACCCGGTGGCCCCATCCCTGGCAAACAGTTTGCTCTCATACTaGAGCCCGGAGGGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: KTGTRSVGINPVAPSLANSLLSY*SPEGFP
Trigger: AGGGAAGCCCTCCGGGCTGCAGTATGAGAGCAAACT...GTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAACGCTCCGGGTGCCTGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp AGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAACCCGGTGGCCGCTGCAGGTTCAGGATaGTGTCGATGGCGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: RSHTDKTGTRSVGINPVAAAGSG*CRWRSA
Trigger: TGCAGAGCGCCATCGACAGCATCCTGAACCTGCAGC...GGCCACCGGGTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp CTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGAAATCTTGCACATGGAGCTaGAGGCCGGGAAAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: LANTCACPPDRGAECARKSCTWS*RPGKVG
Trigger: TCCCACCTTTCCCGGCCTGCAGCTCCATGTGCAAGA...TTTCCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614245.2
CDS-3UTR CCA 90 bp AGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAACCCGGTGGCCGGCTCTGGGTTCAGGTaGTTGCCGGAAGCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: RSHTDKTGTRSVGINPVAGSGFR*LPEASC
Trigger: GCAAGAAGCTTCCGGCAACCACCTGAACCCAGAGCC...GGCCACCGGGTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp CCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAACCCAGTCTAGGTCCACACTaGGGGCCGGCTGGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: PSEKPHRQDRHPERWHQPSLGPH*GPAGWA
Trigger: AGCCCAACCAGCCGGCCCCCAGTGTGGACCTAGACT...GGGTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp CCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAACCCGGTGGTGGTGGCCGGTaGCTGCTTGAAGACGTTCGC +
Preference number: 4 (lower is better)
Translates to: PSEKPHRQDRHPERWHQPGGGGR*LLEDVR
Trigger: GCGAACGTCTTCAAGCAGCCACCGGCCACCACCACC...GGGTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGAAATTGGCTGGGTGGGAACTaGAGCTGGAAGTCGGATGGC +
Preference number: 4 (lower is better)
Translates to: WQTHARVPRTEGQSVPGNWLGGN*SWKSDG
Trigger: GCCATCCGACTTCCAGCTCCAGTTCCCACCCAGCCA...ATTTCCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp ACCCTCCACCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCCCCCCAGCCTTGTTCTaGAGGATGATTCCGGACGGC +
Preference number: 4 (lower is better)
Translates to: TLHHLRSHTDKTGTRSVGPPALF*RMIPDG
Trigger: GCCGTCCGGAATCATCCTCCAGAACAAGGCTGGGGG...GCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGGTGGAGGGT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGAAATCCCCCAGCCTTGTTCTaGAGGATGATTCCGGACGGC +
Preference number: 4 (lower is better)
Translates to: WQTHARVPRTEGQSVPGNPPALF*RMIPDG
Trigger: GCCGTCCGGAATCATCCTCCAGAACAAGGCTGGGGG...ATTTCCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGGAGGCAGGAAGAACAGAGGGTGCTGGGCTGAAGCGTaGGGGGCTTCTTCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: SPRFQNLARAAGGRKNRGCWAEA*GASSGH
Trigger: GTGGCCTGAAGAAGCCCCCCACGCTTCAGCCCAGCA...CCCTCTGTTCTTCCTGCCTCCAGCCGCCCGCGCCAGATTTTGAAATCTCGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGGAGGCAGGAAGAACAGAGGGCTTTGTGGTAGTCACTaGGGGAGGGGAGGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: SPRFQNLARAAGGRKNRGLCGSH*GRGGRP
Trigger: AGGGCGCCCTCCCCTCCCCCAGTGACTACCACAAAG...CCCTCTGTTCTTCCTGCCTCCAGCCGCCCGCGCCAGATTTTGAAATCTCGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp AAGACAGGCACCCGGAGCGTTGGCATCAACCCGGTGGCCCCATCCCTGGCAAACCGTCCGGCTTCTCCTTaGCCAGCTGTTTATCCAAGG +
Preference number: 4 (lower is better)
Translates to: KTGTRSVGINPVAPSLANRPASP*PAVYPR
Trigger: CCTTGGATAAACAGCTGGCCAAGGAGAAGCCGGACG...GTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAACGCTCCGGGTGCCTGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp CACCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAACCCTGCGGGCTGTCGCTaGAGAAGCTGGCCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: HHLRSHTDKTGTRSVGINPAGCR*RSWPGP
Trigger: TGGACCAGGCCAGCTTCTCCAGCGACAGCCCGCAGG...GTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGAAATATCTGGTCAACGTCCTaGCGCCGAGGCCACCGTTGT +
Preference number: 4 (lower is better)
Translates to: WQTHARVPRTEGQSVPGNIWSTS*RRGHRC
Trigger: ACAACGGTGGCCTCGGCGCCAGGACGTTGACCAGAT...ATTTCCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp CACCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAACGGATGGGGTTCGCGATaGGCTGTCCACCTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: HHLRSHTDKTGTRSVGINGWGSR*AVHLCG
Trigger: CCCACACAGGTGGACAGCTCATCGCGAACCCCATCC...GTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp TTCAAAGTCGAGGGGTGGGCGTTCGAAATCTCTCACTCACTTGTGCACACACACGGGCCTCGTAGGTCTTaGTGGGCGGGCGGTTGCGGG +
Preference number: 4 (lower is better)
Translates to: FKVEGWAFEISHSLVHTHGPRRS*WAGGCG
Trigger: CCCGCAACCGCCCGCCCATCAAGACCTACGAGGCCC...GTGTGTGTGCACAAGTGAGTGAGAGATTTCGAACGCCCACCCCTCGACTTTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp CCTCCACCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATGGCTGCAGGAAGGGCTaGACACTCAGGGCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: PPPSEKPHRQDRHPERWHGCRKG*TLRALL
Trigger: CAACAAGGCCCTGAGTGTGCAGCCCTTCCTGCAGCC...ATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGGTGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp TCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGGAGGCAGGAAGAACAGAGGGGCTGCAGTGTCACATTaGCCAGGCCCACAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SPRFQNLARAAGGRKNRGAAVSH*PGPQAA
Trigger: TGCAGCCTGTGGGCCTGGGCAATGTGACACTGCAGC...CCCTCTGTTCTTCCTGCCTCCAGCCGCCCGCGCCAGATTTTGAAATCTCGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp CTTACAGTACTAGTTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGGAGCGGCGGAGAGGATGTaGGCGCTGTGGGCCCCGGAG +
Preference number: 4 (lower is better)
Translates to: LTVLVLSPRFQNLARAAGAAERM*ALWAPE
Trigger: CTCCGGGGCCCACAGCGCGCACATCCTCTCCGCCGC...TCCAGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAACTAGTACTGTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp CACCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAACTCACGGAGCTGGACGTaGGGATGTCACACGGGTGCC +
Preference number: 4 (lower is better)
Translates to: HHLRSHTDKTGTRSVGINSRSWT*GCHTGA
Trigger: GGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGA...GTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp AGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTGCCTGCGGGCACAGCACGTCTCTCACTCACTTGTaGACACACACACACACACAG +
Preference number: 4 (lower is better)
Translates to: RSRSWTCGCHTGACGHSTSLTHL*THTHTQ
Trigger: CTGTGTGTGTGTGTGTGTGCACAAGTGAGTGAGAGA...CGTGCTGTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TTCAAAGTCGAGGGGTGGGCGTTCGAAATCTCTCACTCACTTGTGCACACACACCCAGTGTGGCCGCCGTaGCACCCCCAGGGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: FKVEGWAFEISHSLVHTHPVWPP*HPQGCH
Trigger: ATGGCAGCCCTGGGGGTGCCACGGCGGCCACACTGG...GTGTGTGTGCACAAGTGAGTGAGAGATTTCGAACGCCCACCCCTCGACTTTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp CCAGCAACCCAGCTGAAGCAGGCGGCAGGGAAGGAGGCCTTTGTGACTCAAATAGGTGGTGGTGGCCGGTaGCTGCTTGAAGACGTTCGC +
Preference number: 4 (lower is better)
Translates to: PATQLKQAAGKEAFVTQIGGGGR*LLEDVR
Trigger: GCGAACGTCTTCAAGCAGCCACCGGCCACCACCACC...TATTTGAGTCACAAAGGCCTCCTTCCCTGCCGCCTGCTTCAGCTGGGTTGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp CTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGAAACCTTGGTTCAGGAGGTaGACGCTCATGGGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: LANTCACPPDRGAECARKPWFRR*TLMGLL
Trigger: GAGCAAACCCATGAGCGTCCACCTCCTGAACCAAGG...TTTCCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp CCATCCCTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCACGCCTAGCTGGTTTTaGATGACAAAGATGCCAGGC +
Preference number: 4 (lower is better)
Translates to: PSLANTCACPPDRGAECATPSWF*MTKMPG
Trigger: GCCTGGCATCTTTGTCATCCAAAACCAGCTAGGCGT...GGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAGGGATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp CTTACAGTACTAGTTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGGAGGTCCCTCAGGCGGCTaGGACTGGGGGCGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: LTVLVLSPRFQNLARAAGGPSGG*DWGRRG
Trigger: GCCTCTCCGCCCCCAGTCCCAGCCGCCTGAGGGACC...TCCAGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAACTAGTACTGTAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp CACCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAACCGGAGGAAGCGGCCTTaGCCACATTCAGGGTCGGGA +
Preference number: 4 (lower is better)
Translates to: HHLRSHTDKTGTRSVGINRRKRP*PHSGSG
Trigger: TCCCGACCCTGAATGTGGCCAAGGCCGCTTCCTCCG...GTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp CTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGAAATGCAGGACGGAGCCCTaGTGTTTGTGCAAATGCTCC +
Preference number: 4 (lower is better)
Translates to: LANTCACPPDRGAECARKCRTEP*CLCKCS
Trigger: GGAGCATTTGCACAAACACCAGGGCTCCGTCCTGCA...TTTCCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp CCAGCAACCCAGCTGAAGCAGGCGGCAGGGAAGGAGGCCTTTGTGACTCAAATACTTTGTGGTAGTCACTaGGGGAGGGGAGGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: PATQLKQAAGKEAFVTQILCGSH*GRGGRP
Trigger: AGGGCGCCCTCCCCTCCCCCAGTGACTACCACAAAG...TATTTGAGTCACAAAGGCCTCCTTCCCTGCCGCCTGCTTCAGCTGGGTTGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp CCAGCAACCCAGCTGAAGCAGGCGGCAGGGAAGGAGGCCTTTGTGACTCAAATATGTTTGACAGCCTGTTaGGGGCGGCGGGGAGAGGCT +
Preference number: 4 (lower is better)
Translates to: PATQLKQAAGKEAFVTQICLTAC*GRRGEA
Trigger: AGCCTCTCCCCGCCGCCCCCAACAGGCTGTCAAACA...TATTTGAGTCACAAAGGCCTCCTTCCCTGCCGCCTGCTTCAGCTGGGTTGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp CCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAACCCCACAGGTCACGGAGCTaGACGTGCGGATGTCACACG +
Preference number: 4 (lower is better)
Translates to: PSEKPHRQDRHPERWHQPHRSRS*TCGCHT
Trigger: CGTGTGACATCCGCACGTCCAGCTCCGTGACCTGTG...GGGTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp GCACCCGGAGCGTTGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACATGCGAAGAACATTCCCTCCTaGCATGGTGGTTCACGCTTG +
Preference number: 4 (lower is better)
Translates to: APGALASTRWPHPWQTHAKNIPS*HGGSRL
Trigger: CAAGCGTGAACCACCATGCCAGGAGGGAATGTTCTT...CGCATGTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAACGCTCCGGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614245.2
CDS-3UTR TCA 90 bp CACCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAACACACAGAGTTCCCATTaGGCGTGGTGGCCACAGCGG +
Preference number: 4 (lower is better)
Translates to: HHLRSHTDKTGTRSVGINTQSSH*AWWPQR
Trigger: CCGCTGTGGCCACCACGCTCAATGGGAACTCTGTGT...GTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp TGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGAAATGCACCCTCCACCATCTaGGAAGCCACACAGACAAGA +
Preference number: 4 (lower is better)
Translates to: WQTHARVPRTEGQSVPGNAPSTI*EATQTR
Trigger: TCTTGTCTGTGTGGCTTCTCAGATGGTGGAGGGTGC...ATTTCCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp TTCAAAGTCGAGGGGTGGGCGTTCGAAATCTCTCACTCACTTGTGCACACACACGCGGCGGGGAGAGGCTaGGACTGTCTGGAAGGACCC +
Preference number: 4 (lower is better)
Translates to: FKVEGWAFEISHSLVHTHAAGRG*DCLEGP
Trigger: GGGTCCTTCCAGACAGTCTCAGCCTCTCCCCGCCGC...GTGTGTGTGCACAAGTGAGTGAGAGATTTCGAACGCCCACCCCTCGACTTTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp AGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAACCCGGTGGCCCAAAGAATGCTGAGGTaGCAGGGCAGCCACGTTCAA +
Preference number: 4 (lower is better)
Translates to: RSHTDKTGTRSVGINPVAQRMLR*QGSHVQ
Trigger: TTGAACGTGGCTGCCCTGTCACCTCAGCATTCTTTG...GGCCACCGGGTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614245.2
CDS-3UTR GCA 90 bp CACCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAACGGCTGCAGGAAGGGCTaGACACTCAGGGCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: HHLRSHTDKTGTRSVGINGCRKG*TLRALL
Trigger: CAACAAGGCCCTGAGTGTGCAGCCCTTCCTGCAGCC...GTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp AAGACAGGCACCCGGAGCGTTGGCATCAACCCGGTGGCCCCATCCCTGGCAAACGAGCCCTGGTGTTTGTaGAAATGCTCCAGGAAACAG +
Preference number: 4 (lower is better)
Translates to: KTGTRSVGINPVAPSLANEPWCL*KCSRKQ
Trigger: CTGTTTCCTGGAGCATTTGCACAAACACCAGGGCTC...GTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAACGCTCCGGGTGCCTGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGGAGGCAGGAAGAACATTGTTGACCACGTCCTaGGGCGGCACCAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: FCLRDFKIWRGRLEAGRTLLTTS*GGTRAW
Trigger: CCAGGCCCTGGTGCCGCCCCAGGACGTGGTCAACAA...TGTTCTTCCTGCCTCCAGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp CCAGCAACCCAGCTGAAGCAGGCGGCAGGGAAGGAGGCCTTTGTGACTCAAATACTTGGAGGCCCGGGATaGGCTGCAGTGTCACATTGC +
Preference number: 4 (lower is better)
Translates to: PATQLKQAAGKEAFVTQILGGPG*AAVSHC
Trigger: GCAATGTGACACTGCAGCCCATCCCGGGCCTCCAAG...TATTTGAGTCACAAAGGCCTCCTTCCCTGCCGCCTGCTTCAGCTGGGTTGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp CACCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAACGGTGGGAACTGGAGCTaGAAGTCGGATGGCGTAGGG +
Preference number: 4 (lower is better)
Translates to: HHLRSHTDKTGTRSVGINGGNWS*KSDGVG
Trigger: CCCTACGCCATCCGACTTCCAGCTCCAGTTCCCACC...GTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp CCAGCAACCCAGCTGAAGCAGGCGGCAGGGAAGGAGGCCTTTGTGACTCAAATAATCTGGTCAACGTCCTaGCGCCGAGGCCACCGTTGT +
Preference number: 4 (lower is better)
Translates to: PATQLKQAAGKEAFVTQIIWSTS*RRGHRC
Trigger: ACAACGGTGGCCTCGGCGCCAGGACGTTGACCAGAT...TATTTGAGTCACAAAGGCCTCCTTCCCTGCCGCCTGCTTCAGCTGGGTTGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp TTCAAAGTCGAGGGGTGGGCGTTCGAAATCTCTCACTCACTTGTGCACACACACGTGCAAGGGTGGCTCTaGGGGAGGGCGGGACACACT +
Preference number: 4 (lower is better)
Translates to: FKVEGWAFEISHSLVHTHVQGWL*GRAGHT
Trigger: AGTGTGTCCCGCCCTCCCTCAGAGCCACCCTTGCAC...GTGTGTGTGCACAAGTGAGTGAGAGATTTCGAACGCCCACCCCTCGACTTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp TTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGGAGGCAGGAAGAACACATTACCATCTCCGCTaGGGGGCTCACCCTCCGGGA +
Preference number: 4 (lower is better)
Translates to: FCLRDFKIWRGRLEAGRTHYHLR*GAHPPG
Trigger: TCCCGGAGGGTGAGCCCCTCAGCGGAGATGGTAATG...TGTTCTTCCTGCCTCCAGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp TGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGAAATCTGGGTTCAGGTGGTTaGCGGAAGCTTCTTGCACAT +
Preference number: 4 (lower is better)
Translates to: WQTHARVPRTEGQSVPGNLGSGG*RKLLAH
Trigger: ATGTGCAAGAAGCTTCCGGCAACCACCTGAACCCAG...ATTTCCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp TATCTTACAGTACTAGTTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTTCTGCGTGGGCAGGCTaGCCGCCGCCAGCGACACGG +
Preference number: 4 (lower is better)
Translates to: YLTVLVLSPRFQNLARAASAWAG*PPPATR
Trigger: CCGTGTCGCTGGCGGCGGGCAGCCTGCCCACGCAGA...AGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAACTAGTACTGTAAGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp CCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAACCCTCAGGCCACTCAGTTTaGTCTCATACTGCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: PSEKPHRQDRHPERWHQPSGHSV*SHTAAR
Trigger: CCGGGCTGCAGTATGAGAGCAAACTGAGTGGCCTGA...GGGTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp TTCAAAGTCGAGGGGTGGGCGTTCGAAATCTCTCACTCACTTGTGCACACACACACCCTCGGAAGAGGCTaGGATGGGGAGGCCGAGCGA +
Preference number: 4 (lower is better)
Translates to: FKVEGWAFEISHSLVHTHTLGRG*DGEAER
Trigger: TCGCTCGGCCTCCCCATCGCAGCCTCTTCCGAGGGT...GTGTGTGTGCACAAGTGAGTGAGAGATTTCGAACGCCCACCCCTCGACTTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp CTTACAGTACTAGTTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGGACCGCCTGCCCCGCCGTaGCGGATCACAAGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: LTVLVLSPRFQNLARAAGPPAPP*RITSLV
Trigger: CACCAAGCTTGTGATCCGGCACGGCGGGGCAGGCGG...TCCAGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAACTAGTACTGTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp CCTCCACCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCTGAGCCCGGCTTCCTaGTTGATCTTGAGCTTGAGC +
Preference number: 4 (lower is better)
Translates to: PPPSEKPHRQDRHPERWHLSPAS*LILSLS
Trigger: GCTCAAGCTCAAGATCAAGCAGGAAGCCGGGCTCAG...ATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGGTGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp CCAGCAACCCAGCTGAAGCAGGCGGCAGGGAAGGAGGCCTTTGTGACTCAAATATTGCCGGAAGCTTCTTaGACATGGAGCTGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: PATQLKQAAGKEAFVTQILPEAS*TWSCRP
Trigger: CGGCCTGCAGCTCCATGTGCAAGAAGCTTCCGGCAA...TATTTGAGTCACAAAGGCCTCCTTCCCTGCCGCCTGCTTCAGCTGGGTTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614245.2
CDS-3UTR CCA 90 bp CCAGCAACCCAGCTGAAGCAGGCGGCAGGGAAGGAGGCCTTTGTGACTCAAATAGGCTCTGGGTTCAGGTaGTTGCCGGAAGCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: PATQLKQAAGKEAFVTQIGSGFR*LPEASC
Trigger: GCAAGAAGCTTCCGGCAACCACCTGAACCCAGAGCC...TATTTGAGTCACAAAGGCCTCCTTCCCTGCCGCCTGCTTCAGCTGGGTTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGGAGGCAGGAAGAACACGGCTGGTTGGGCTCTaGGTTCAGGTGGTTGCCGGA +
Preference number: 4 (lower is better)
Translates to: FCLRDFKIWRGRLEAGRTRLVGL*VQVVAG
Trigger: TCCGGCAACCACCTGAACCCAGAGCCCAACCAGCCG...TGTTCTTCCTGCCTCCAGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp CCAGCAACCCAGCTGAAGCAGGCGGCAGGGAAGGAGGCCTTTGTGACTCAAATATCTTGGAGGCTCTGCTaGAGGATGTCACAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PATQLKQAAGKEAFVTQISWRLC*RMSQGW
Trigger: CCAGCCCTGTGACATCCTCCAGCAGAGCCTCCAAGA...TATTTGAGTCACAAAGGCCTCCTTCCCTGCCGCCTGCTTCAGCTGGGTTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TATCTTACAGTACTAGTTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTCCTGGGAAGAGGGCTTaGGGCCCCGCAGCCACGGCC +
Preference number: 4 (lower is better)
Translates to: YLTVLVLSPRFQNLARAAPGKRA*GPAATA
Trigger: GGCCGTGGCTGCGGGGCCCCAAGCCCTCTTCCCAGG...AGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAACTAGTACTGTAAGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGGAGGCAGGAAGAACATGCTTGGCCAGGAGCTaGGAGGTGGGCGTGTTGAGC +
Preference number: 4 (lower is better)
Translates to: FCLRDFKIWRGRLEAGRTCLARS*EVGVLS
Trigger: GCTCAACACGCCCACCTCCCAGCTCCTGGCCAAGCA...TGTTCTTCCTGCCTCCAGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TTCAAAGTCGAGGGGTGGGCGTTCGAAATCTCTCACTCACTTGTGCACACACACGGAGGTGGACGCTCATaGGTTTGCTCAGGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: FKVEGWAFEISHSLVHTHGGGRS*VCSGPR
Trigger: CCGGGGCCCTGAGCAAACCCATGAGCGTCCACCTCC...GTGTGTGTGCACAAGTGAGTGAGAGATTTCGAACGCCCACCCCTCGACTTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp CACCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAACACGATGCTGCTGCCTTaGTTCAGGAGGTGGACGCTC +
Preference number: 4 (lower is better)
Translates to: HHLRSHTDKTGTRSVGINTMLLP*FRRWTL
Trigger: GAGCGTCCACCTCCTGAACCAAGGCAGCAGCATCGT...GTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp CCAGCAACCCAGCTGAAGCAGGCGGCAGGGAAGGAGGCCTTTGTGACTCAAATAACGATGCTGCTGCCTTaGTTCAGGAGGTGGACGCTC +
Preference number: 4 (lower is better)
Translates to: PATQLKQAAGKEAFVTQITMLLP*FRRWTL
Trigger: GAGCGTCCACCTCCTGAACCAAGGCAGCAGCATCGT...TATTTGAGTCACAAAGGCCTCCTTCCCTGCCGCCTGCTTCAGCTGGGTTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp CTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGAAAACGCCTAGCTGGTTTTaGATGACAAAGATGCCAGGC +
Preference number: 4 (lower is better)
Translates to: LANTCACPPDRGAECARKTPSWF*MTKMPG
Trigger: GCCTGGCATCTTTGTCATCCAAAACCAGCTAGGCGT...TTTCCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGGAGGCAGGAAGAACACGGCCCGGTGTTATCTaGTCAACGTCCTGGCGCCGA +
Preference number: 4 (lower is better)
Translates to: FCLRDFKIWRGRLEAGRTRPGVI*STSWRR
Trigger: TCGGCGCCAGGACGTTGACCAGATAACACCGGGCCG...TGTTCTTCCTGCCTCCAGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp TTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGGAGGCAGGAAGAACATGCCGCAAAGAATGCTaGGGTGACAGGGCAGCCACG +
Preference number: 4 (lower is better)
Translates to: FCLRDFKIWRGRLEAGRTCRKEC*GDRAAT
Trigger: CGTGGCTGCCCTGTCACCTCAGCATTCTTTGCGGCA...TGTTCTTCCTGCCTCCAGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614245.2
CDS-3UTR GCA 90 bp CCAGCAACCCAGCTGAAGCAGGCGGCAGGGAAGGAGGCCTTTGTGACTCAAATAAGTTTGCTCTCATACTaGAGCCCGGAGGGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: PATQLKQAAGKEAFVTQISLLSY*SPEGFP
Trigger: AGGGAAGCCCTCCGGGCTGCAGTATGAGAGCAAACT...TATTTGAGTCACAAAGGCCTCCTTCCCTGCCGCCTGCTTCAGCTGGGTTGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp CCAGCAACCCAGCTGAAGCAGGCGGCAGGGAAGGAGGCCTTTGTGACTCAAATATCAGGCCACTCAGTTTaGTCTCATACTGCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: PATQLKQAAGKEAFVTQISGHSV*SHTAAR
Trigger: CCGGGCTGCAGTATGAGAGCAAACTGAGTGGCCTGA...TATTTGAGTCACAAAGGCCTCCTTCCCTGCCGCCTGCTTCAGCTGGGTTGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp CCAGCAACCCAGCTGAAGCAGGCGGCAGGGAAGGAGGCCTTTGTGACTCAAATAGTGCGTTTCAGCAGCTaGGTGGAGACCGTCTCAAAC +
Preference number: 4 (lower is better)
Translates to: PATQLKQAAGKEAFVTQIVRFSS*VETVSN
Trigger: GTTTGAGACGGTCTCCACGCAGCTGCTGAAACGCAC...TATTTGAGTCACAAAGGCCTCCTTCCCTGCCGCCTGCTTCAGCTGGGTTGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp TTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGGAGGCAGGAAGAACATCCCTGGCAAACACATaGGCGTGTCCCCCGGACAGA +
Preference number: 4 (lower is better)
Translates to: FCLRDFKIWRGRLEAGRTSLANT*ACPPDR
Trigger: TCTGTCCGGGGGACACGCGCATGTGTTTGCCAGGGA...TGTTCTTCCTGCCTCCAGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TATCTTACAGTACTAGTTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGGCGGCACCAGGGCCTaGTGGGTCAGCACGGTAGGC +
Preference number: 4 (lower is better)
Translates to: YLTVLVLSPRFQNLARAAGGTRA*WVSTVG
Trigger: GCCTACCGTGCTGACCCACCAGGCCCTGGTGCCGCC...AGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAACTAGTACTGTAAGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TATCTTACAGTACTAGTTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGCAGGCTGGCCCACCTaGATGGGAGCGGCGGAGAGG +
Preference number: 4 (lower is better)
Translates to: YLTVLVLSPRFQNLARAAAGWPT*MGAAER
Trigger: CCTCTCCGCCGCTCCCATCCAGGTGGGCCAGCCTGC...AGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAACTAGTACTGTAAGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGGAGGCAGGAAGAACAGAGGGGTTTCAGCAGCTGCGTaGAGACCGTCTCAAACTCCT +
Preference number: 4 (lower is better)
Translates to: SPRFQNLARAAGGRKNRGVSAAA*RPSQTP
Trigger: AGGAGTTTGAGACGGTCTCCACGCAGCTGCTGAAAC...CCCTCTGTTCTTCCTGCCTCCAGCCGCCCGCGCCAGATTTTGAAATCTCGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGGAGGCAGGAAGAACATCAGGATGCTGTCGATaGCGCTCTGCAGGTGCTCGG +
Preference number: 4 (lower is better)
Translates to: FCLRDFKIWRGRLEAGRTSGCCR*RSAGAR
Trigger: CCGAGCACCTGCAGAGCGCCATCGACAGCATCCTGA...TGTTCTTCCTGCCTCCAGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGGAGGCAGGAAGAACACACAGGTCACGGAGCTaGACGTGCGGATGTCACACG +
Preference number: 4 (lower is better)
Translates to: FCLRDFKIWRGRLEAGRTHRSRS*TCGCHT
Trigger: CGTGTGACATCCGCACGTCCAGCTCCGTGACCTGTG...TGTTCTTCCTGCCTCCAGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TCTTACAGTACTAGTTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGGTCTGGCGCGGGCGGCTaGAGGCAGGAAGAACAGAGG +
Preference number: 4 (lower is better)
Translates to: SYSTSFVSEISKSGAGGWSGAGG*RQEEQR
Trigger: CCTCTGTTCTTCCTGCCTCCAGCCGCCCGCGCCAGA...CCAGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAACTAGTACTGTAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp TCTTACAGTACTAGTTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGGCCAGCGTCTGCTCCGTaGTGTTGGCCTCTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: SYSTSFVSEISKSGAGGWPASAP*CWPLGG
Trigger: GCCTCCAAGAGGCCAACATCACGGAGCAGACGCTGG...CCAGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAACTAGTACTGTAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp TTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGGAGGCAGGAAGAACACCTTGTTCTGGAGGATaGTTCCGGACGGCACCTGGT +
Preference number: 4 (lower is better)
Translates to: FCLRDFKIWRGRLEAGRTPCSGG*FRTAPG
Trigger: ACCAGGTGCCGTCCGGAATCATCCTCCAGAACAAGG...TGTTCTTCCTGCCTCCAGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp CCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAACCCGTGGTCTTCTCCTCCTaGATGAACATTCGGTCGATC +
Preference number: 4 (lower is better)
Translates to: PSEKPHRQDRHPERWHQPVVFSS*MNIRSI
Trigger: GATCGACCGAATGTTCATTCAGGAGGAGAAGACCAC...GGGTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp CCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAACCCAGCTTCTCGGATCCATaGAAGAAGTCATTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: PSEKPHRQDRHPERWHQPSFSDP*KKSLRA
Trigger: GGCCCTCAATGACTTCTTGCATGGATCCGAGAAGCT...GGGTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396720.7
CDS-3UTR GCA 90 bp TTCAAAGTCGAGGGGTGGGCGTTCGAAATCTCTCACTCACTTGTGCACACACACTCGGCCTCCAGCGTCTaGTCCGTGATGTTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: FKVEGWAFEISHSLVHTHSASSV*SVMLAS
Trigger: AGAGGCCAACATCACGGAGCAGACGCTGGAGGCCGA...GTGTGTGTGCACAAGTGAGTGAGAGATTTCGAACGCCCACCCCTCGACTTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp TTCAAAGTCGAGGGGTGGGCGTTCGAAATCTCTCACTCACTTGTGCACACACACATGAACGTCAGGTTCTaGGGGGCCTTGGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: FKVEGWAFEISHSLVHTHMNVRF*GALGCC
Trigger: GCAGCAGCCCAAGGCCCCGCAGAACCTGACGTTCAT...GTGTGTGTGCACAAGTGAGTGAGAGATTTCGAACGCCCACCCCTCGACTTTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp TTCAAAGTCGAGGGGTGGGCGTTCGAAATCTCTCACTCACTTGTGCACACACACGTGGTGGCCGGTGGCTaGTTGAAGACGTTCGCTTGC +
Preference number: 4 (lower is better)
Translates to: FKVEGWAFEISHSLVHTHVVAGG*LKTFAC
Trigger: GCAAGCGAACGTCTTCAAGCAGCCACCGGCCACCAC...GTGTGTGTGCACAAGTGAGTGAGAGATTTCGAACGCCCACCCCTCGACTTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp CCAGCAACCCAGCTGAAGCAGGCGGCAGGGAAGGAGGCCTTTGTGACTCAAATATCAGGGTCGGGAGGTTaGTGGCAAAAGCCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: PATQLKQAAGKEAFVTQISGSGG*WQKPCS
Trigger: AGAACAAGGCTTTTGCCAGCAACCTCCCGACCCTGA...TATTTGAGTCACAAAGGCCTCCTTCCCTGCCGCCTGCTTCAGCTGGGTTGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp TTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGGAGGCAGGAAGAACAGCTGCAGGTTCAGGATaGTGTCGATGGCGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: FCLRDFKIWRGRLEAGRTAAGSG*CRWRSA
Trigger: TGCAGAGCGCCATCGACAGCATCCTGAACCTGCAGC...TGTTCTTCCTGCCTCCAGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp CCAGCAACCCAGCTGAAGCAGGCGGCAGGGAAGGAGGCCTTTGTGACTCAAATAGTTTCAGCAGCTGCGTaGAGACCGTCTCAAACTCCT +
Preference number: 4 (lower is better)
Translates to: PATQLKQAAGKEAFVTQIVSAAA*RPSQTP
Trigger: AGGAGTTTGAGACGGTCTCCACGCAGCTGCTGAAAC...TATTTGAGTCACAAAGGCCTCCTTCCCTGCCGCCTGCTTCAGCTGGGTTGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp CTTACAGTACTAGTTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGGACGGTGGCCCCATCCCTaGCAAACACATGCGCGTGTC +
Preference number: 4 (lower is better)
Translates to: LTVLVLSPRFQNLARAAGRWPHP*QTHARV
Trigger: GACACGCGCATGTGTTTGCCAGGGATGGGGCCACCG...TCCAGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAACTAGTACTGTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGGAGGCAGGAAGAACAAGAGGGAAGACTAGCTaGGGAGAGGTTCGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: FCLRDFKIWRGRLEAGRTRGKTS*GEVRGR
Trigger: TCTCCCCCGAACCTCTCCCCAGCTAGTCTTCCCTCT...TGTTCTTCCTGCCTCCAGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp CTTACAGTACTAGTTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGGAGCCTCTTGGAGGCTCTaGTGGAGGATGTCACAGGGC +
Preference number: 4 (lower is better)
Translates to: LTVLVLSPRFQNLARAAGASWRL*WRMSQG
Trigger: GCCCTGTGACATCCTCCAGCAGAGCCTCCAAGAGGC...TCCAGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAACTAGTACTGTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp CTTACAGTACTAGTTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGGAATGAACGTCAGGTTCTaGGGGGCCTTGGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LTVLVLSPRFQNLARAAGMNVRF*GALGCC
Trigger: GCAGCAGCCCAAGGCCCCGCAGAACCTGACGTTCAT...TCCAGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAACTAGTACTGTAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp TATCTTACAGTACTAGTTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGTGGCAGAGGGCGGCTaGCCCAGGACGATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: YLTVLVLSPRFQNLARAAVAEGG*PRTIFS
Trigger: GGAGAAGATCGTCCTGGGGCAGCCGCCCTCTGCCAC...AGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAACTAGTACTGTAAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp CCTCCACCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATTGGTGTTTGTGCAAATaGTCCAGGAAACAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: PPPSEKPHRQDRHPERWHWCLCK*SRKQAS
Trigger: GGAAGCCTGTTTCCTGGAGCATTTGCACAAACACCA...ATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGGTGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TCTTACAGTACTAGTTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGGCTTGGAGGCCCGGGATaGGCTGCAGTGTCACATTGC +
Preference number: 4 (lower is better)
Translates to: SYSTSFVSEISKSGAGGWLGGPG*AAVSHC
Trigger: GCAATGTGACACTGCAGCCCATCCCGGGCCTCCAAG...CCAGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAACTAGTACTGTAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp CTTACAGTACTAGTTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGGATGGCTGGGTGGGAACTaGAGCTGGAAGTCGGATGGC +
Preference number: 4 (lower is better)
Translates to: LTVLVLSPRFQNLARAAGWLGGN*SWKSDG
Trigger: GCCATCCGACTTCCAGCTCCAGTTCCCACCCAGCCA...TCCAGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAACTAGTACTGTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TTCAAAGTCGAGGGGTGGGCGTTCGAAATCTCTCACTCACTTGTGCACACACACCCCTTCAGCATACGCTaGTACAGCTCGTCCTCCACG +
Preference number: 4 (lower is better)
Translates to: FKVEGWAFEISHSLVHTHPFSIR*YSSSST
Trigger: CGTGGAGGACGAGCTGTACCAGCGTATGCTGAAGGG...GTGTGTGTGCACAAGTGAGTGAGAGATTTCGAACGCCCACCCCTCGACTTTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp TATCTTACAGTACTAGTTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTTGTGCTGGGCGGGGATaGCGATGCTGCTGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: YLTVLVLSPRFQNLARAACAGRG*RCCCLG
Trigger: ACCAAGGCAGCAGCATCGTCATCCCCGCCCAGCACA...AGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAACTAGTACTGTAAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp TATCTTACAGTACTAGTTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGTCCCAGATGGGGCCTaGCCACTGACCAGCACAGAC +
Preference number: 4 (lower is better)
Translates to: YLTVLVLSPRFQNLARAAVPDGA*PLTSTD
Trigger: GTCTGTGCTGGTCAGTGGGCAGGCCCCATCTGGGAC...AGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAACTAGTACTGTAAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp CACCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAACTGGTGTTTGTGCAAATaGTCCAGGAAACAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: HHLRSHTDKTGTRSVGINWCLCK*SRKQAS
Trigger: GGAAGCCTGTTTCCTGGAGCATTTGCACAAACACCA...GTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGGAGGCAGGAAGAACATTATTGAGCATGGCCTaGGTGCGTTTCAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: FCLRDFKIWRGRLEAGRTLLSMA*VRFSSC
Trigger: GCAGCTGCTGAAACGCACCCAGGCCATGCTCAATAA...TGTTCTTCCTGCCTCCAGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp TTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGGAGGCAGGAAGAACACATGCAAGAAGTCATTaGGGGCCTGTGGGTCACAAA +
Preference number: 4 (lower is better)
Translates to: FCLRDFKIWRGRLEAGRTHARSH*GPVGHK
Trigger: TTTGTGACCCACAGGCCCTCAATGACTTCTTGCATG...TGTTCTTCCTGCCTCCAGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396720.7
CDS-3UTR TCA 90 bp TTCAAAGTCGAGGGGTGGGCGTTCGAAATCTCTCACTCACTTGTGCACACACACGGAGCCGATATTTATTaGGCATGGCCTGGGTGCGTT +
Preference number: 4 (lower is better)
Translates to: FKVEGWAFEISHSLVHTHGADIY*AWPGCV
Trigger: AACGCACCCAGGCCATGCTCAATAAATATCGGCTCC...GTGTGTGTGCACAAGTGAGTGAGAGATTTCGAACGCCCACCCCTCGACTTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp TCTTACAGTACTAGTTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGGCTGAGCCCGGCTTCCTaGTTGATCTTGAGCTTGAGC +
Preference number: 4 (lower is better)
Translates to: SYSTSFVSEISKSGAGGWLSPAS*LILSLS
Trigger: GCTCAAGCTCAAGATCAAGCAGGAAGCCGGGCTCAG...CCAGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAACTAGTACTGTAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TATCTTACAGTACTAGTTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTAGCCTTGTTCTCGGCTaGAAGCAGAGGAGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: YLTVLVLSPRFQNLARAASLVLG*KQRREA
Trigger: GGCCTCCCTCCTCTGCTTCCAGCCGAGAACAAGGCT...AGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAACTAGTACTGTAAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp CCAGCAACCCAGCTGAAGCAGGCGGCAGGGAAGGAGGCCTTTGTGACTCAAATATCTTCTCCTCCTGAATaGACATTCGGTCGATCATTA +
Preference number: 4 (lower is better)
Translates to: PATQLKQAAGKEAFVTQISSPPE*TFGRSL
Trigger: TAATGATCGACCGAATGTTCATTCAGGAGGAGAAGA...TATTTGAGTCACAAAGGCCTCCTTCCCTGCCGCCTGCTTCAGCTGGGTTGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR GCA 90 bp TTCAAAGTCGAGGGGTGGGCGTTCGAAATCTCTCACTCACTTGTGCACACACACGAGCCCTGGTGTTTGTaGAAATGCTCCAGGAAACAG +
Preference number: 4 (lower is better)
Translates to: FKVEGWAFEISHSLVHTHEPWCL*KCSRKQ
Trigger: CTGTTTCCTGGAGCATTTGCACAAACACCAGGGCTC...GTGTGTGTGCACAAGTGAGTGAGAGATTTCGAACGCCCACCCCTCGACTTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TTCAAAGTCGAGGGGTGGGCGTTCGAAATCTCTCACTCACTTGTGCACACACACGGGGGAACGCCTAGCTaGTTTTGGATGACAAAGATG +
Preference number: 4 (lower is better)
Translates to: FKVEGWAFEISHSLVHTHGGTPS*FWMTKM
Trigger: CATCTTTGTCATCCAAAACCAGCTAGGCGTTCCCCC...GTGTGTGTGCACAAGTGAGTGAGAGATTTCGAACGCCCACCCCTCGACTTTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TCTTACAGTACTAGTTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGGTTATTGAGCATGGCCTaGGTGCGTTTCAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SYSTSFVSEISKSGAGGWLLSMA*VRFSSC
Trigger: GCAGCTGCTGAAACGCACCCAGGCCATGCTCAATAA...CCAGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAACTAGTACTGTAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CCA 90 bp TTCAAAGTCGAGGGGTGGGCGTTCGAAATCTCTCACTCACTTGTGCACACACACTTCAAAGTCGAGGGGTaGGCGTTCGAAATCTCTCAC +
Preference number: 4 (lower is better)
Translates to: FKVEGWAFEISHSLVHTHFKVEG*AFEISH
Trigger: GTGAGAGATTTCGAACGCCCACCCCTCGACTTTGAA...GTGTGTGTGCACAAGTGAGTGAGAGATTTCGAACGCCCACCCCTCGACTTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp TATCTTACAGTACTAGTTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGCACCCTCCACCATCTaGGAAGCCACACAGACAAGA +
Preference number: 4 (lower is better)
Translates to: YLTVLVLSPRFQNLARAAAPSTI*EATQTR
Trigger: TCTTGTCTGTGTGGCTTCTCAGATGGTGGAGGGTGC...AGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAACTAGTACTGTAAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR TCA 90 bp TATCTTACAGTACTAGTTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGTGGTCTTCTCCTCCTaGATGAACATTCGGTCGATC +
Preference number: 4 (lower is better)
Translates to: YLTVLVLSPRFQNLARAAVVFSS*MNIRSI
Trigger: GATCGACCGAATGTTCATTCAGGAGGAGAAGACCAC...AGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAACTAGTACTGTAAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS GCA 90 bp AGGGAGGACCCAGAAGGGGCCGGCCGGCCGGGCCGGTCAGCGCACTaGCTGATCGCATGGCGGCCGCTCGGCAGCCGCTGCCGGGCCCCC +
Preference number: 5 (lower is better)
Translates to: REDPEGAGRPGRSAH*LIAWRPLGSRCRAP
Trigger: GGGGGCCCGGCAGCGGCTGCCGAGCGGCCGCCATGCGATCAGGCAGTGCGCTGACCGGCCCGGCCGGCCGGCCCCTTCTGGGTCCTCCCT
80% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594866.2
CDS GCA 90 bp TGGCGGCCGGCCCGGCGGGCGCTGGCTGGCTCTGCGTGGGCAGGCTaGCCGCCGCCAGCGACACGGGCATCTGGAAGAGCGCAGGCTGGC +
Preference number: 5 (lower is better)
Translates to: WRPARRALAGSAWAG*PPPATRASGRAQAG
Trigger: GCCAGCCTGCGCTCTTCCAGATGCCCGTGTCGCTGGCGGCGGGCAGCCTGCCCACGCAGAGCCAGCCAGCGCCCGCCGGGCCGGCCGCCA
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS GCA 90 bp GCTGCCCCTCCAGCGCCCGTCGGGCCTGCCCCGCCATCCGCAGGCTaGAGGGTGGGCAGCTGGAAGGGACCCAGGTCCAGCTCAGCCTCG +
Preference number: 5 (lower is better)
Translates to: AAPPAPVGPAPPSAG*RVGSWKGPRSSSAS
Trigger: CGAGGCTGAGCTGGACCTGGGTCCCTTCCAGCTGCCCACCCTGCAGCCTGCGGATGGCGGGGCAGGCCCGACGGGCGCTGGAGGGGCAGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS CCA 90 bp GCTGGCCCACCACCTGGATGGGCGCCAGGCCCAGTGTGGCCGCCGTaGCACCCCCAGGGCTGCCATTGGGCAGGCCTTGGAGGCCCGGGA +
Preference number: 5 (lower is better)
Translates to: AGPPPGWAPGPVWPP*HPQGCHWAGLGGPG
Trigger: TCCCGGGCCTCCAAGGCCTGCCCAATGGCAGCCCTGGGGGTGCCACGGCGGCCACACTGGGCCTGGCGCCCATCCAGGTGGTGGGCCAGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp GGACGTGCGGATGTCACACGGGTGCCTGCGGGCACAGCACGCTGGGAGGCTGGCGTGGCCTCGTCCACTTaGGCGGGCAGCGGCGCCGGG +
Preference number: 5 (lower is better)
Translates to: GRADVTRVPAGTARWEAGVASST*AGSGAG
Trigger: CCCGGCGCCGCTGCCCGCCAAAGTGGACGAGGCCAC...GCCAGCCTCCCAGCGTGCTGTGCCCGCAGGCACCCGTGTGACATCCGCACGTCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp GCTCGAGTCCCCAGGAGGCTGAGGGCGGACACCCGACTGTCCCGGCGTCTTCGGGTGGCCTCGTCCACTTaGGCGGGCAGCGGCGCCGGG +
Preference number: 5 (lower is better)
Translates to: ARVPRRLRADTRLSRRLRVASST*AGSGAG
Trigger: CCCGGCGCCGCTGCCCGCCAAAGTGGACGAGGCCAC...CCGAAGACGCCGGGACAGTCGGGTGTCCGCCCTCAGCCTCCTGGGGACTCGAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS GCA 90 bp TGTCGCTGGAGAAGCTGGCCTGGTCCACGTCGGGCGACTCGGACTTaGGCCGCTTGGCAGGGGGCAGCCCGGGCGCCTCCCAGTCGGGGT +
Preference number: 5 (lower is better)
Translates to: CRWRSWPGPRRATRT*AAWQGAARAPPSRG
Trigger: ACCCCGACTGGGAGGCGCCCGGGCTGCCCCCTGCCAAGCGGCGCAAGTCCGAGTCGCCCGACGTGGACCAGGCCAGCTTCTCCAGCGACA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396720.7
ENST00000602258.1
ENST00000614245.2
CDS GCA 90 bp GCAGCGTGGGGGTACGAGGGCGCGGGCGTCCGGCCGGGGGCCTGCTaGAGGTTCAGGATGCTGTCGATGGCGCTCTGCAGGTGCTCGGTG +
Preference number: 5 (lower is better)
Translates to: AAWGYEGAGVRPGAC*RFRMLSMALCRCSV
Trigger: CACCGAGCACCTGCAGAGCGCCATCGACAGCATCCTGAACCTGCAGCAGGCCCCCGGCCGGACGCCCGCGCCCTCGTACCCCCACGCTGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000396720.7
ENST00000602258.1
ENST00000614245.2
CDS GCA 90 bp GAGGCAGCGTGGGGGTACGAGGGCGCGGGCGTCCGGCCGGGGGCCTaGTGCAGGTTCAGGATGCTGTCGATGGCGCTCTGCAGGTGCTCG +
Preference number: 5 (lower is better)
Translates to: EAAWGYEGAGVRPGA*CRFRMLSMALCRCS
Trigger: CGAGCACCTGCAGAGCGCCATCGACAGCATCCTGAACCTGCAGCAGGCCCCCGGCCGGACGCCCGCGCCCTCGTACCCCCACGCTGCCTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000396720.7
ENST00000602258.1
ENST00000614245.2
CDS CCA 90 bp GCCGCCAGCGACACGGGCATCTGGAAGAGCGCAGGCTGGCCCACCTaGATGGGAGCGGCGGAGAGGATGTGCGCGCTGTGGGCCCCGGAG +
Preference number: 5 (lower is better)
Translates to: AASDTGIWKSAGWPT*MGAAERMCALWAPE
Trigger: CTCCGGGGCCCACAGCGCGCACATCCTCTCCGCCGCTCCCATCCAGGTGGGCCAGCCTGCGCTCTTCCAGATGCCCGTGTCGCTGGCGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS TCA 90 bp GGAAGCCCGACAGCACCACGTTCTGGCCCGCCTTCCCCGCCGCCATaGACGTCAGGTTCTGCGGGGCCTTGGGCTGCTGCGGGAGCGCCC +
Preference number: 5 (lower is better)
Translates to: GSPTAPRSGPPSPPP*TSGSAGPWAAAGAP
Trigger: GGGCGCTCCCGCAGCAGCCCAAGGCCCCGCAGAACCTGACGTTCATGGCGGCGGGGAAGGCGGGCCAGAACGTGGTGCTGTCGGGCTTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS TCA 90 bp GCATACGCTGGTACAGCTCGTCCTCCACGGCCGCCAGCTCGCGGATaGGCCCGCTGGTGGCCTCGTCCACTTTGGCGGGCAGCGGCGCCG +
Preference number: 5 (lower is better)
Translates to: AYAGTARPPRPPARG*ARWWPRPLWRAAAP
Trigger: CGGCGCCGCTGCCCGCCAAAGTGGACGAGGCCACCAGCGGGCTCATCCGCGAGCTGGCGGCCGTGGAGGACGAGCTGTACCAGCGTATGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396720.7
ENST00000602258.1
ENST00000614245.2
CDS CCA 90 bp CTCAGGGCCTTGTTGACCACGTCCTGGGGCGGCACCAGGGCCTGGTaGGTCAGCACGGTAGGCGGGCCCTGCAGCCCCAGCAGGTCGGTG +
Preference number: 5 (lower is better)
Translates to: LRALLTTSWGGTRAW*VSTVGGPCSPSRSV
Trigger: CACCGACCTGCTGGGGCTGCAGGGCCCGCCTACCGTGCTGACCCACCAGGCCCTGGTGCCGCCCCAGGACGTGGTCAACAAGGCCCTGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS CCA 90 bp TTGGCCAGGAGCTGGGAGGTGGGCGTGTTGAGCGCCATGACGGGCTaGCCCACCACCTGGATGGGCGCCAGGCCCAGTGTGGCCGCCGTG +
Preference number: 5 (lower is better)
Translates to: LARSWEVGVLSAMTG*PTTWMGARPSVAAV
Trigger: CACGGCGGCCACACTGGGCCTGGCGCCCATCCAGGTGGTGGGCCAGCCCGTCATGGCGCTCAACACGCCCACCTCCCAGCTCCTGGCCAA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS CCA 90 bp CACAGCGGCCGAGAGGTTCTTCTGGATGACCAGGCCAGCCCCCTGTaGCGAGACACCGGCCGACGCCAGCGTCACGGGCTCCGAGGGGCC +
Preference number: 5 (lower is better)
Translates to: HSGREVLLDDQASPL*RDTGRRQRHGLRGA
Trigger: GGCCCCTCGGAGCCCGTGACGCTGGCGTCGGCCGGTGTCTCGCCACAGGGGGCTGGCCTGGTCATCCAGAAGAACCTCTCGGCCGCTGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS CCA 90 bp TCAGAGGAGGAGGCCACAGCAGAGGAGGTGGAGGATGGAGGGAGGTaGGGGGCTGGGGGCAGCGGTCCCTCAGGCGGCTGGGACTGGGGG +
Preference number: 5 (lower is better)
Translates to: SEEEATAEEVEDGGR*GAGGSGPSGGWDWG
Trigger: CCCCCAGTCCCAGCCGCCTGAGGGACCGCTGCCCCCAGCCCCCCACCTCCCTCCATCCTCCACCTCCTCTGCTGTGGCCTCCTCCTCTGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS TCA 90 bp AGGAGGAGGAAGAGGAGGACAGGGAGGAGGACGCCCGGGCCCAGGTaGCCGAAGGGGAGCCGCCTGCCCCGCCGTGCCGGATCACAAGCT +
Preference number: 5 (lower is better)
Translates to: RRRKRRTGRRTPGPR*PKGSRLPRRAGSQA
Trigger: AGCTTGTGATCCGGCACGGCGGGGCAGGCGGCTCCCCTTCGGTCACCTGGGCCCGGGCGTCCTCCTCCCTGTCCTCCTCTTCCTCCTCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396720.7
ENST00000602258.1
ENST00000614245.2
CDS GCA 90 bp GCCGCTCCGGTGGTGGTGGCCGGTGGCTGCTTGAAGACGTTCGCTTaGAGCGCAGGCGCGGGGAAGCCCGACAGCACCACGTTCTGGCCC +
Preference number: 5 (lower is better)
Translates to: AAPVVVAGGCLKTFA*SAGAGKPDSTTFWP
Trigger: GGGCCAGAACGTGGTGCTGTCGGGCTTCCCCGCGCCTGCGCTGCAAGCGAACGTCTTCAAGCAGCCACCGGCCACCACCACCGGAGCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS CCA 90 bp ACACTCAGGGCCTTGTTGACCACGTCCTGGGGCGGCACCAGGGCCTaGTGGGTCAGCACGGTAGGCGGGCCCTGCAGCCCCAGCAGGTCG +
Preference number: 5 (lower is better)
Translates to: TLRALLTTSWGGTRA*WVSTVGGPCSPSRS
Trigger: CGACCTGCTGGGGCTGCAGGGCCCGCCTACCGTGCTGACCCACCAGGCCCTGGTGCCGCCCCAGGACGTGGTCAACAAGGCCCTGAGTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS CCA 90 bp GGCTGCAGGAAGGGCTGCACACTCAGGGCCTTGTTGACCACGTCCTaGGGCGGCACCAGGGCCTGGTGGGTCAGCACGGTAGGCGGGCCC +
Preference number: 5 (lower is better)
Translates to: GCRKGCTLRALLTTS*GGTRAWWVSTVGGP
Trigger: GGGCCCGCCTACCGTGCTGACCCACCAGGCCCTGGTGCCGCCCCAGGACGTGGTCAACAAGGCCCTGAGTGTGCAGCCCTTCCTGCAGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS CCA 90 bp GGGGGCCGTGGCCGGGAAGCCGATGACCCTCGGAAGAGGCTGCGATaGGGAGGCCGAGCGAGCGGGAGGAAGACACGTACTCGTCCGGCT +
Preference number: 5 (lower is better)
Translates to: GGRGREADDPRKRLR*GGRASGRKTRTRPA
Trigger: AGCCGGACGAGTACGTGTCTTCCTCCCGCTCGCTCGGCCTCCCCATCGCAGCCTCTTCCGAGGGTCATCGGCTTCCCGGCCACGGCCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp GACAGGCACCCGGAGCGTTGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACTCGGACTTGCGCCGCTaGGCAGGGGGCAGCCCGGGC +
Preference number: 5 (lower is better)
Translates to: DRHPERWHQPGGPIPGKHSDLRR*AGGSPG
Trigger: GCCCGGGCTGCCCCCTGCCAAGCGGCGCAAGTCCGA...GTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAACGCTCCGGGTGCCTGTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS GCA 90 bp CGACAGGGGGCCGTGGCCGGGAAGCCGATGACCCTCGGAAGAGGCTaGGATGGGGAGGCCGAGCGAGCGGGAGGAAGACACGTACTCGTC +
Preference number: 5 (lower is better)
Translates to: RQGAVAGKPMTLGRG*DGEAERAGGRHVLV
Trigger: GACGAGTACGTGTCTTCCTCCCGCTCGCTCGGCCTCCCCATCGCAGCCTCTTCCGAGGGTCATCGGCTTCCCGGCCACGGCCCCCTGTCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396720.7
ENST00000602258.1
ENST00000614245.2
CDS CCA 90 bp TGCGGGAGCTGGACCGCCGGGGCGCCAGGCAGTAGGAACTGGTTCTaGCCCGGCAGCATGTGCTGGGCGGGGATGACGATGCTGCTGCCT +
Preference number: 5 (lower is better)
Translates to: CGSWTAGAPGSRNWF*PGSMCWAGMTMLLP
Trigger: AGGCAGCAGCATCGTCATCCCCGCCCAGCACATGCTGCCGGGCCAGAACCAGTTCCTACTGCCTGGCGCCCCGGCGGTCCAGCTCCCGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS CCA 90 bp TCGGTGAGCGTGTCATCCTGCGGGCTGTCGCTGGAGAAGCTGGCCTaGTCCACGTCGGGCGACTCGGACTTGCGCCGCTTGGCAGGGGGC +
Preference number: 5 (lower is better)
Translates to: SVSVSSCGLSLEKLA*STSGDSDLRRLAGG
Trigger: GCCCCCTGCCAAGCGGCGCAAGTCCGAGTCGCCCGACGTGGACCAGGCCAGCTTCTCCAGCGACAGCCCGCAGGATGACACGCTCACCGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396720.7
ENST00000602258.1
ENST00000614245.2
CDS CCA 90 bp GGGACGGGGAAGGGGAGGCGGCCCGGTGTTATCTGGTCAACGTCCTaGCGCCGAGGCCACCGTTGTGACTGGAGGGTGGGTAGGCCTCGG +
Preference number: 5 (lower is better)
Translates to: GTGKGRRPGVIWSTS*RRGHRCDWRVGRPR
Trigger: CCGAGGCCTACCCACCCTCCAGTCACAACGGTGGCCTCGGCGCCAGGACGTTGACCAGATAACACCGGGCCGCCTCCCCTTCCCCGTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396720.7
ENST00000602258.1
ENST00000614245.2
CDS CCA 90 bp GGGGGCCGTGGCCGGGAAGCCGATGACCCTCGGAAGAGGCTGCGATaGGGAGGCCGAGCGAGCGGGAGGAAGACACGTACTCGTCTGCAG +
Preference number: 5 (lower is better)
Translates to: GGRGREADDPRKRLR*GGRASGRKTRTRLQ
Trigger: CTGCAGACGAGTACGTGTCTTCCTCCCGCTCGCTCGGCCTCCCCATCGCAGCCTCTTCCGAGGGTCATCGGCTTCCCGGCCACGGCCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602258.1
CDS-3UTR CAA 90 bp GCACCCGGAGCGTTGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACATGCGAGGTTCTGCGGGGCCTaGGGCTGCTGCGGGAGCGCC +
Preference number: 5 (lower is better)
Translates to: APGALASTRWPHPWQTHARFCGA*GCCGSA
Trigger: GGCGCTCCCGCAGCAGCCCAAGGCCCCGCAGAACCT...CGCATGTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAACGCTCCGGGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp AGGGCGGACACCCGACTGTCCCGGCGTCTTCGGGAGGAGGGGACGGGGAAGGGGGTGGCCGGTGGCTGCTaGAAGACGTTCGCTTGCAGC +
Preference number: 5 (lower is better)
Translates to: RADTRLSRRLREEGTGKGVAGGC*KTFACS
Trigger: GCTGCAAGCGAACGTCTTCAAGCAGCCACCGGCCAC...CCCCTTCCCCGTCCCCTCCTCCCGAAGACGCCGGGACAGTCGGGTGTCCGCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp TGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACATGCGCGTGTCCCCCGGACCGAGGCCAGCTCCTTaGGCGACGGGGGTGGCTGGG +
Preference number: 5 (lower is better)
Translates to: WHQPGGPIPGKHMRVSPGPRPAP*ATGVAG
Trigger: CCCAGCCACCCCCGTCGCCAAAGGAGCTGGCCTCGG...TCCGGGGGACACGCGCATGTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp ACACACAGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTGCCTGCGGGCACGCAGTAGGGGCCGGGTaGCTGGCAGGCGGGGGAACG +
Preference number: 5 (lower is better)
Translates to: THRSRSWTCGCHTGACGHAVGAG*LAGGGT
Trigger: CGTTCCCCCGCCTGCCAGCAACCCGGCCCCTACTGC...GTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCTGTGTGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp ACACAGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTGCCTGCGGGCACAGTCGGGCGACTCGGACTaGCGCCGCTTGGCAGGGGGC +
Preference number: 5 (lower is better)
Translates to: TQVTELDVRMSHGCLRAQSGDSD*RRLAGG
Trigger: GCCCCCTGCCAAGCGGCGCAAGTCCGAGTCGCCCGA...CTGTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCTGTGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp GCTCGAGTCCCCAGGAGGCTGAGGGCGGACACCCGACTGTCCCGGCGTCTTCGGTTGTTTGACAGCCTGTaGGGGGCGGCGGGGAGAGGC +
Preference number: 5 (lower is better)
Translates to: ARVPRRLRADTRLSRRLRLFDSL*GAAGRG
Trigger: GCCTCTCCCCGCCGCCCCCAACAGGCTGTCAAACAA...CCGAAGACGCCGGGACAGTCGGGTGTCCGCCCTCAGCCTCCTGGGGACTCGAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS GCA 90 bp CGGCCGGGGGCCTGCTGCAGGTTCAGGATGCTGTCGATGGCGCTCTaGAGGTGCTCGGTGAGCGTGTCATCCTGCGGGCTGTCGCTGGAG +
Preference number: 5 (lower is better)
Translates to: RPGACCRFRMLSMAL*RCSVSVSSCGLSLE
Trigger: CTCCAGCGACAGCCCGCAGGATGACACGCTCACCGAGCACCTGCAGAGCGCCATCGACAGCATCCTGAACCTGCAGCAGGCCCCCGGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396720.7
ENST00000602258.1
ENST00000614245.2
CDS CCA 90 bp GGTGTTATCTGGTCAACGTCCTGGCGCCGAGGCCACCGTTGTGACTaGAGGGTGGGTAGGCCTCGGGCCTGTGCAGGGGCGGCGGGGATG +
Preference number: 5 (lower is better)
Translates to: GVIWSTSWRRGHRCD*RVGRPRACAGAAGM
Trigger: CATCCCCGCCGCCCCTGCACAGGCCCGAGGCCTACCCACCCTCCAGTCACAACGGTGGCCTCGGCGCCAGGACGTTGACCAGATAACACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396720.7
ENST00000602258.1
ENST00000614245.2
CDS-3UTR CAA 90 bp AGGGCGGACACCCGACTGTCCCGGCGTCTTCGGGAGGAGGGGACGGGGAAGGGGTTGGAAAGGGTCCTCTaGGGGGCCAGCCTAGCTGGT +
Preference number: 5 (lower is better)
Translates to: RADTRLSRRLREEGTGKGLERVL*GASLAG
Trigger: ACCAGCTAGGCTGGCCCCCAAGAGGACCCTTTCCAA...CCCCTTCCCCGTCCCCTCCTCCCGAAGACGCCGGGACAGTCGGGTGTCCGCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000396720.7
CDS-3UTR CAA 90 bp TGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACATGCGCGTGTCCCCCGGACTGGGGGCCGGCTGGTaGGGCTCTGGGTTCAGGTGG +
Preference number: 5 (lower is better)
Translates to: WHQPGGPIPGKHMRVSPGLGAGW*GSGFRW
Trigger: CCACCTGAACCCAGAGCCCAACCAGCCGGCCCCCAG...TCCGGGGGACACGCGCATGTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp CTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGAAAGCCTGGGAAGAGGGCTaGGGGCCCCGCAGCCACGGC +
Preference number: 5 (lower is better)
Translates to: LANTCACPPDRGAECARKAWEEG*GPRSHG
Trigger: GCCGTGGCTGCGGGGCCCCAAGCCCTCTTCCCAGGC...TTTCCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp GACAGGCACCCGGAGCGTTGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACATCTGCCCGCCCACGTaGGCCGGCAGGGCTGAGAGC +
Preference number: 5 (lower is better)
Translates to: DRHPERWHQPGGPIPGKHICPPT*AGRAES
Trigger: GCTCTCAGCCCTGCCGGCCAACGTGGGCGGGCAGAT...GTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAACGCTCCGGGTGCCTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp GACAGGCACCCGGAGCGTTGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACAGGCCGTCGGGGGTGTaGAGCATGGCCACGGCGCTG +
Preference number: 5 (lower is better)
Translates to: DRHPERWHQPGGPIPGKHRPSGV*SMATAL
Trigger: CAGCGCCGTGGCCATGCTCAACACCCCCGACGGCCT...GTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAACGCTCCGGGTGCCTGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp AGGGCGGACACCCGACTGTCCCGGCGTCTTCGGGAGGAGGGGACGGGGAAGGGGTGCTTGATCTTGAGCTaGAGCCCGATGCGGCTCCGG +
Preference number: 5 (lower is better)
Translates to: RADTRLSRRLREEGTGKGCLILS*SPMRLR
Trigger: CCGGAGCCGCATCGGGCTCAAGCTCAAGATCAAGCA...CCCCTTCCCCGTCCCCTCCTCCCGAAGACGCCGGGACAGTCGGGTGTCCGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp GGACGTGCGGATGTCACACGGGTGCCTGCGGGCACAGCACGCTGGGAGGCTGGCGTGTTGTGCACGACCTaGCTGAGCCCGGCTTCCTGC +
Preference number: 5 (lower is better)
Translates to: GRADVTRVPAGTARWEAGVLCTT*LSPASC
Trigger: GCAGGAAGCCGGGCTCAGCAAGGTCGTGCACAACAC...GCCAGCCTCCCAGCGTGCTGTGCCCGCAGGCACCCGTGTGACATCCGCACGTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS GCA 90 bp GCCGGGGCGCCAGGCAGTAGGAACTGGTTCTGGCCCGGCAGCATGTaGTGGGCGGGGATGACGATGCTGCTGCCTTGGTTCAGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: AGAPGSRNWFWPGSM*WAGMTMLLPWFRRW
Trigger: CCACCTCCTGAACCAAGGCAGCAGCATCGTCATCCCCGCCCAGCACATGCTGCCGGGCCAGAACCAGTTCCTACTGCCTGGCGCCCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS CCA 90 bp GAGTTCCCATTGAGCGTGGTGGCCACAGCGGCCGAGAGGTTCTTCTaGATGACCAGGCCAGCCCCCTGTGGCGAGACACCGGCCGACGCC +
Preference number: 5 (lower is better)
Translates to: EFPLSVVATAAERFF*MTRPAPCGETPADA
Trigger: GGCGTCGGCCGGTGTCTCGCCACAGGGGGCTGGCCTGGTCATCCAGAAGAACCTCTCGGCCGCTGTGGCCACCACGCTCAATGGGAACTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS CCA 90 bp TGGCCCGGCAGCATGTGCTGGGCGGGGATGACGATGCTGCTGCCTTaGTTCAGGAGGTGGACGCTCATGGGTTTGCTCAGGGCCCCGGGG +
Preference number: 5 (lower is better)
Translates to: WPGSMCWAGMTMLLP*FRRWTLMGLLRAPG
Trigger: CCCCGGGGCCCTGAGCAAACCCATGAGCGTCCACCTCCTGAACCAAGGCAGCAGCATCGTCATCCCCGCCCAGCACATGCTGCCGGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS CCA 90 bp TTCTGGTTTGTGAGGATGGGGTTCGCGATGAGCTGTCCACCTGTGTaGGGGGCAGCGGCCGCCAGGATCTGCCCGCCCACGTTGGCCGGC +
Preference number: 5 (lower is better)
Translates to: FWFVRMGFAMSCPPV*GAAAARICPPTLAG
Trigger: GCCGGCCAACGTGGGCGGGCAGATCCTGGCGGCCGCTGCCCCCCACACAGGTGGACAGCTCATCGCGAACCCCATCCTCACAAACCAGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp GAGGCTGAGGGCGGACACCCGACTGTCCCGGCGTCTTCGGGAGGAGGGGACGGGCGTGATGTTGGCCTCTaGGAGGCTCTGCTGGAGGAT +
Preference number: 5 (lower is better)
Translates to: EAEGGHPTVPASSGGGDGRDVGL*EALLED
Trigger: ATCCTCCAGCAGAGCCTCCAAGAGGCCAACATCACG...CCCGTCCCCTCCTCCCGAAGACGCCGGGACAGTCGGGTGTCCGCCCTCAGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp TGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGAAATGCCTGGGAAGAGGGCTaGGGGCCCCGCAGCCACGGC +
Preference number: 5 (lower is better)
Translates to: WQTHARVPRTEGQSVPGNAWEEG*GPRSHG
Trigger: GCCGTGGCTGCGGGGCCCCAAGCCCTCTTCCCAGGC...ATTTCCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp AGGGCGGACACCCGACTGTCCCGGCGTCTTCGGGAGGAGGGGACGGGGAAGGGGAACACAGAGTTCCCATaGAGCGTGGTGGCCACAGCG +
Preference number: 5 (lower is better)
Translates to: RADTRLSRRLREEGTGKGNTEFP*SVVATA
Trigger: CGCTGTGGCCACCACGCTCAATGGGAACTCTGTGTT...CCCCTTCCCCGTCCCCTCCTCCCGAAGACGCCGGGACAGTCGGGTGTCCGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp CTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGAAACCGAGGCCAGCTCCTTaGGCGACGGGGGTGGCTGGG +
Preference number: 5 (lower is better)
Translates to: LANTCACPPDRGAECARKPRPAP*ATGVAG
Trigger: CCCAGCCACCCCCGTCGCCAAAGGAGCTGGCCTCGG...TTTCCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp CTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGAAATCGGGCGACTCGGACTaGCGCCGCTTGGCAGGGGGC +
Preference number: 5 (lower is better)
Translates to: LANTCACPPDRGAECARKSGDSD*RRLAGG
Trigger: GCCCCCTGCCAAGCGGCGCAAGTCCGAGTCGCCCGA...TTTCCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS CCA 90 bp GGGGCGCCAGGCAGTAGGAACTGGTTCTGGCCCGGCAGCATGTGCTaGGCGGGGATGACGATGCTGCTGCCTTGGTTCAGGAGGTGGACG +
Preference number: 5 (lower is better)
Translates to: GAPGSRNWFWPGSMC*AGMTMLLPWFRRWT
Trigger: CGTCCACCTCCTGAACCAAGGCAGCAGCATCGTCATCCCCGCCCAGCACATGCTGCCGGGCCAGAACCAGTTCCTACTGCCTGGCGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp GCACCCGGAGCGTTGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACATGCGCCCCCAGCTGGGGACTaGGAAAGGGTCCTCTTGGGG +
Preference number: 5 (lower is better)
Translates to: APGALASTRWPHPWQTHAPPAGD*ERVLLG
Trigger: CCCCAAGAGGACCCTTTCCAAGTCCCCAGCTGGGGG...CGCATGTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAACGCTCCGGGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396720.7
CDS-3UTR CAA 90 bp GAGGCTGAGGGCGGACACCCGACTGTCCCGGCGTCTTCGGGAGGAGGGGACGGGTCTGGGTTCAGGTGGTaGCCGGAAGCTTCTTGCACA +
Preference number: 5 (lower is better)
Translates to: EAEGGHPTVPASSGGGDGSGFRW*PEASCT
Trigger: TGTGCAAGAAGCTTCCGGCAACCACCTGAACCCAGA...CCCGTCCCCTCCTCCCGAAGACGCCGGGACAGTCGGGTGTCCGCCCTCAGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp AGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAACCCGGTGGCCGCCATTGGGCAGGCCTaGGAGGCCCGGGATGGGCTG +
Preference number: 5 (lower is better)
Translates to: RSHTDKTGTRSVGINPVAAIGQA*EARDGL
Trigger: CAGCCCATCCCGGGCCTCCAAGGCCTGCCCAATGGC...GGCCACCGGGTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp AGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAACCCGGTGGCCAGGCCGTCGGGGGTGTaGAGCATGGCCACGGCGCTG +
Preference number: 5 (lower is better)
Translates to: RSHTDKTGTRSVGINPVARPSGV*SMATAL
Trigger: CAGCGCCGTGGCCATGCTCAACACCCCCGACGGCCT...GGCCACCGGGTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp ACCCTCCACCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCGCAGTAGGGGCCGGGTaGCTGGCAGGCGGGGGAACG +
Preference number: 5 (lower is better)
Translates to: TLHHLRSHTDKTGTRSVGAVGAG*LAGGGT
Trigger: CGTTCCCCCGCCTGCCAGCAACCCGGCCCCTACTGC...GCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGGTGGAGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp GAGGCTGAGGGCGGACACCCGACTGTCCCGGCGTCTTCGGGAGGAGGGGACGGGTTCAGGGTCGGGAGGTaGCTGGCAAAAGCCTTGTTC +
Preference number: 5 (lower is better)
Translates to: EAEGGHPTVPASSGGGDGFRVGR*LAKALF
Trigger: GAACAAGGCTTTTGCCAGCAACCTCCCGACCCTGAA...CCCGTCCCCTCCTCCCGAAGACGCCGGGACAGTCGGGTGTCCGCCCTCAGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS GCA 90 bp AGGCCCGGGATGGGCTGCAGTGTCACATTGCCCAGGCCCACAGGCTaGAGGAAGGGCTGCACACTCAGGGCCTTGTTGACCACGTCCTGG +
Preference number: 5 (lower is better)
Translates to: RPGMGCSVTLPRPTG*RKGCTLRALLTTSW
Trigger: CCAGGACGTGGTCAACAAGGCCCTGAGTGTGCAGCCCTTCCTGCAGCCTGTGGGCCTGGGCAATGTGACACTGCAGCCCATCCCGGGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS GCA 90 bp GGGGCCTGCTGCAGGTTCAGGATGCTGTCGATGGCGCTCTGCAGGTaGTCGGTGAGCGTGTCATCCTGCGGGCTGTCGCTGGAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: GACCRFRMLSMALCR*SVSVSSCGLSLEKL
Trigger: CAGCTTCTCCAGCGACAGCCCGCAGGATGACACGCTCACCGAGCACCTGCAGAGCGCCATCGACAGCATCCTGAACCTGCAGCAGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396720.7
ENST00000602258.1
ENST00000614245.2
CDS GCA 90 bp GGTCCACACTGGGGGCCGGCTGGTTGGGCTCTGGGTTCAGGTGGTTaGCGGAAGCTTCTTGCACATGGAGCTGCAGGCCGGGAAAGGTGG +
Preference number: 5 (lower is better)
Translates to: GPHWGPAGWALGSGG*RKLLAHGAAGRERW
Trigger: CCACCTTTCCCGGCCTGCAGCTCCATGTGCAAGAAGCTTCCGGCAACCACCTGAACCCAGAGCCCAACCAGCCGGCCCCCAGTGTGGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614245.2
CDS CCA 90 bp AGCTCAGCCTCGGCCTCCAGCGTCTGCTCCGTGATGTTGGCCTCTTaGAGGCTCTGCTGGAGGATGTCACAGGGCTGGTCAGCGCCCCCA +
Preference number: 5 (lower is better)
Translates to: SSASASSVCSVMLAS*RLCWRMSQGWSAPP
Trigger: TGGGGGCGCTGACCAGCCCTGTGACATCCTCCAGCAGAGCCTCCAAGAGGCCAACATCACGGAGCAGACGCTGGAGGCCGAGGCTGAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396720.7
ENST00000594866.2
ENST00000614245.2
CDS-3UTR CAA 90 bp ACCCTCCACCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCCTGGGGGCCGGCTGGTaGGGCTCTGGGTTCAGGTGG +
Preference number: 5 (lower is better)
Translates to: TLHHLRSHTDKTGTRSVGLGAGW*GSGFRW
Trigger: CCACCTGAACCCAGAGCCCAACCAGCCGGCCCCCAG...GCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGGTGGAGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp ACACAGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTGCCTGCGGGCACAGTGCACACTCAGGGCCTaGTTGACCACGTCCTGGGGC +
Preference number: 5 (lower is better)
Translates to: TQVTELDVRMSHGCLRAQCTLRA*LTTSWG
Trigger: GCCCCAGGACGTGGTCAACAAGGCCCTGAGTGTGCA...CTGTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCTGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp ACACACAGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTGCCTGCGGGCACTGCACACTCAGGGCCTaGTTGACCACGTCCTGGGGC +
Preference number: 5 (lower is better)
Translates to: THRSRSWTCGCHTGACGHCTLRA*LTTSWG
Trigger: GCCCCAGGACGTGGTCAACAAGGCCCTGAGTGTGCA...GTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCTGTGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp GCACCCGGAGCGTTGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACATGCGCTTGAAGACGTTCGCTaGCAGCGCAGGCGCGGGGAA +
Preference number: 5 (lower is better)
Translates to: APGALASTRWPHPWQTHALEDVR*QRRRGE
Trigger: TTCCCCGCGCCTGCGCTGCAAGCGAACGTCTTCAAG...CGCATGTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAACGCTCCGGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp AGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTGCCTGCGGGCACAGCACGGACGATGCTGCTGCCTaGGTTCAGGAGGTGGACGCT +
Preference number: 5 (lower is better)
Translates to: RSRSWTCGCHTGACGHSTDDAAA*VQEVDA
Trigger: AGCGTCCACCTCCTGAACCAAGGCAGCAGCATCGTC...CGTGCTGTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp CCATCCCTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCTGCCGGATCACAAGCTaGGTGGGCAGGTGTGGAGGG +
Preference number: 5 (lower is better)
Translates to: PSLANTCACPPDRGAECACRITS*VGRCGG
Trigger: CCCTCCACACCTGCCCACCAAGCTTGTGATCCGGCA...GGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAGGGATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS TCA 90 bp AGGGACCCAGGTCCAGCTCAGCCTCGGCCTCCAGCGTCTGCTCCGTaGTGTTGGCCTCTTGGAGGCTCTGCTGGAGGATGTCACAGGGCT +
Preference number: 5 (lower is better)
Translates to: RDPGPAQPRPPASAP*CWPLGGSAGGCHRA
Trigger: AGCCCTGTGACATCCTCCAGCAGAGCCTCCAAGAGGCCAACATCACGGAGCAGACGCTGGAGGCCGAGGCTGAGCTGGACCTGGGTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS TCA 90 bp GCTGCAGGTTCAGGATGCTGTCGATGGCGCTCTGCAGGTGCTCGGTaGGCGTGTCATCCTGCGGGCTGTCGCTGGAGAAGCTGGCCTGGT +
Preference number: 5 (lower is better)
Translates to: AAGSGCCRWRSAGAR*ACHPAGCRWRSWPG
Trigger: ACCAGGCCAGCTTCTCCAGCGACAGCCCGCAGGATGACACGCTCACCGAGCACCTGCAGAGCGCCATCGACAGCATCCTGAACCTGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396720.7
ENST00000602258.1
ENST00000614245.2
CDS GCA 90 bp CTGGCCCGGAGGAAGCGGCCTTGGCCACATTCAGGGTCGGGAGGTTaGTGGCAAAAGCCTTGTTCTCGGCTGGAAGCAGAGGAGGGAGGC +
Preference number: 5 (lower is better)
Translates to: LARRKRPWPHSGSGG*WQKPCSRLEAEEGG
Trigger: GCCTCCCTCCTCTGCTTCCAGCCGAGAACAAGGCTTTTGCCAGCAACCTCCCGACCCTGAATGTGGCCAAGGCCGCTTCCTCCGGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS CCA 90 bp CTGGCTGGGTGGGAACTGGAGCTGGAAGTCGGATGGCGTAGGGGCTaGCAACCTGGAGGACGTCTCAGAGGAGGAGGCCACAGCAGAGGA +
Preference number: 5 (lower is better)
Translates to: LAGWELELEVGWRRG*QPGGRLRGGGHSRG
Trigger: TCCTCTGCTGTGGCCTCCTCCTCTGAGACGTCCTCCAGGTTGCCAGCCCCTACGCCATCCGACTTCCAGCTCCAGTTCCCACCCAGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS CCA 90 bp CACCTGGTGAAATCTCTCGAGAAGAGCCTTCGGCTGGGGCAGCGCTaGGAAGGGGGTGGTCACCATCTGGAAGGTCCGAGGAGGCGGTGG +
Preference number: 5 (lower is better)
Translates to: HLVKSLEKSLRLGQR*EGGGHHLEGPRRRW
Trigger: CCACCGCCTCCTCGGACCTTCCAGATGGTGACCACCCCCTTCCCAGCGCTGCCCCAGCCGAAGGCTCTTCTCGAGAGATTTCACCAGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS CCA 90 bp GCCCGGAGGAAGCGGCCTTGGCCACATTCAGGGTCGGGAGGTTGCTaGCAAAAGCCTTGTTCTCGGCTGGAAGCAGAGGAGGGAGGCCTG +
Preference number: 5 (lower is better)
Translates to: ARRKRPWPHSGSGGC*QKPCSRLEAEEGGL
Trigger: CAGGCCTCCCTCCTCTGCTTCCAGCCGAGAACAAGGCTTTTGCCAGCAACCTCCCGACCCTGAATGTGGCCAAGGCCGCTTCCTCCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp GGACGTGCGGATGTCACACGGGTGCCTGCGGGCACAGCACGCTGGGAGGCTGGCTTCATAGAAGGCACTTaGGGCCTCCCCGGGATTATC +
Preference number: 5 (lower is better)
Translates to: GRADVTRVPAGTARWEAGFIEGT*GLPGII
Trigger: GATAATCCCGGGGAGGCCCAAAGTGCCTTCTATGAA...GCCAGCCTCCCAGCGTGCTGTGCCCGCAGGCACCCGTGTGACATCCGCACGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396720.7
CDS-3UTR CAA 90 bp ACACACAGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTGCCTGCGGGCACGTCTGCTCCGTGATGTaGGCCTCTTGGAGGCTCTGC +
Preference number: 5 (lower is better)
Translates to: THRSRSWTCGCHTGACGHVCSVM*ASWRLC
Trigger: GCAGAGCCTCCAAGAGGCCAACATCACGGAGCAGAC...GTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCTGTGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp CTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGAAAGGCTGCAGTGTCACATaGCCCAGGCCCACAGGCTGC +
Preference number: 5 (lower is better)
Translates to: LANTCACPPDRGAECARKGCSVT*PRPTGC
Trigger: GCAGCCTGTGGGCCTGGGCAATGTGACACTGCAGCC...TTTCCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp CCTCCACCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATATCTGCCCGCCCACGTaGGCCGGCAGGGCTGAGAGC +
Preference number: 5 (lower is better)
Translates to: PPPSEKPHRQDRHPERWHICPPT*AGRAES
Trigger: GCTCTCAGCCCTGCCGGCCAACGTGGGCGGGCAGAT...ATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGGTGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp GGACGTGCGGATGTCACACGGGTGCCTGCGGGCACAGCACGCTGGGAGGCTGGCACGGAGCCCTGGTGTTaGTGCAAATGCTCCAGGAAA +
Preference number: 5 (lower is better)
Translates to: GRADVTRVPAGTARWEAGTEPWC*CKCSRK
Trigger: TTTCCTGGAGCATTTGCACAAACACCAGGGCTCCGT...GCCAGCCTCCCAGCGTGCTGTGCCCGCAGGCACCCGTGTGACATCCGCACGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp GCTCGAGTCCCCAGGAGGCTGAGGGCGGACACCCGACTGTCCCGGCGTCTTCGGAGGAGCCGATATTTATaGAGCATGGCCTGGGTGCGT +
Preference number: 5 (lower is better)
Translates to: ARVPRRLRADTRLSRRLRRSRYL*SMAWVR
Trigger: ACGCACCCAGGCCATGCTCAATAAATATCGGCTCCT...CCGAAGACGCCGGGACAGTCGGGTGTCCGCCCTCAGCCTCCTGGGGACTCGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp TGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACATGCGCGTGTCCCCCGGAAGCCCGGCTTCCTGCTaGATCTTGAGCTTGAGCCCG +
Preference number: 5 (lower is better)
Translates to: WHQPGGPIPGKHMRVSPGSPASC*ILSLSP
Trigger: CGGGCTCAAGCTCAAGATCAAGCAGGAAGCCGGGCT...TCCGGGGGACACGCGCATGTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp ACACACAGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTGCCTGCGGGCACAGCCCGGCTTCCTGCTaGATCTTGAGCTTGAGCCCG +
Preference number: 5 (lower is better)
Translates to: THRSRSWTCGCHTGACGHSPASC*ILSLSP
Trigger: CGGGCTCAAGCTCAAGATCAAGCAGGAAGCCGGGCT...GTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCTGTGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp CCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAACCCCAGGCACCCGGAGCGTaGGCATCAACCCGGTGGCCC +
Preference number: 5 (lower is better)
Translates to: PSEKPHRQDRHPERWHQPQAPGA*ASTRWP
Trigger: GGGCCACCGGGTTGATGCCAACGCTCCGGGTGCCTG...GGGTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp CCTCCACCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAGGCACCCGGAGCGTaGGCATCAACCCGGTGGCCC +
Preference number: 5 (lower is better)
Translates to: PPPSEKPHRQDRHPERWHQAPGA*ASTRWP
Trigger: GGGCCACCGGGTTGATGCCAACGCTCCGGGTGCCTG...ATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGGTGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS GCA 90 bp AGCTGGAAGGGACCCAGGTCCAGCTCAGCCTCGGCCTCCAGCGTCTaGTCCGTGATGTTGGCCTCTTGGAGGCTCTGCTGGAGGATGTCA +
Preference number: 5 (lower is better)
Translates to: SWKGPRSSSASASSV*SVMLASWRLCWRMS
Trigger: TGACATCCTCCAGCAGAGCCTCCAAGAGGCCAACATCACGGAGCAGACGCTGGAGGCCGAGGCTGAGCTGGACCTGGGTCCCTTCCAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS CCA 90 bp TCTAGGTCCACACTGGGGGCCGGCTGGTTGGGCTCTGGGTTCAGGTaGTTGCCGGAAGCTTCTTGCACATGGAGCTGCAGGCCGGGAAAG +
Preference number: 5 (lower is better)
Translates to: SRSTLGAGWLGSGFR*LPEASCTWSCRPGK
Trigger: CTTTCCCGGCCTGCAGCTCCATGTGCAAGAAGCTTCCGGCAACCACCTGAACCCAGAGCCCAACCAGCCGGCCCCCAGTGTGGACCTAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614245.2
CDS-3UTR CAA 90 bp AAGACAGGCACCCGGAGCGTTGGCATCAACCCGGTGGCCCCATCCCTGGCAAACGTCTGCTCCGTGATGTaGGCCTCTTGGAGGCTCTGC +
Preference number: 5 (lower is better)
Translates to: KTGTRSVGINPVAPSLANVCSVM*ASWRLC
Trigger: GCAGAGCCTCCAAGAGGCCAACATCACGGAGCAGAC...GTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAACGCTCCGGGTGCCTGTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp ACCCTCCACCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCACACTCAGGGCCTTGTaGACCACGTCCTGGGGCGGC +
Preference number: 5 (lower is better)
Translates to: TLHHLRSHTDKTGTRSVGTLRAL*TTSWGG
Trigger: GCCGCCCCAGGACGTGGTCAACAAGGCCCTGAGTGT...GCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGGTGGAGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp ACCCTCCACCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCGGCTGCAGTGTCACATaGCCCAGGCCCACAGGCTGC +
Preference number: 5 (lower is better)
Translates to: TLHHLRSHTDKTGTRSVGGCSVT*PRPTGC
Trigger: GCAGCCTGTGGGCCTGGGCAATGTGACACTGCAGCC...GCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGGTGGAGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp CACCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAACGCCATTGGGCAGGCCTaGGAGGCCCGGGATGGGCTG +
Preference number: 5 (lower is better)
Translates to: HHLRSHTDKTGTRSVGINAIGQA*EARDGL
Trigger: CAGCCCATCCCGGGCCTCCAAGGCCTGCCCAATGGC...GTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp GCACCCGGAGCGTTGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACATGCGAACACAGAGTTCCCATaGAGCGTGGTGGCCACAGCG +
Preference number: 5 (lower is better)
Translates to: APGALASTRWPHPWQTHANTEFP*SVVATA
Trigger: CGCTGTGGCCACCACGCTCAATGGGAACTCTGTGTT...CGCATGTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCAACGCTCCGGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp CCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAACCCCCGGAGGAAGCGGCCTaGGCCACATTCAGGGTCGGG +
Preference number: 5 (lower is better)
Translates to: PSEKPHRQDRHPERWHQPPEEAA*ATFRVG
Trigger: CCCGACCCTGAATGTGGCCAAGGCCGCTTCCTCCGG...GGGTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp TGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGAAATGGGTCCAGGGCCGTGTaGTGCACGACCTTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: WQTHARVPRTEGQSVPGNGSRAV*CTTLLS
Trigger: GCTCAGCAAGGTCGTGCACAACACGGCCCTGGACCC...ATTTCCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp ACACAGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTGCCTGCGGGCACAGACCCCCTCTCCGGTTTaGTTTGACAGCCTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: TQVTELDVRMSHGCLRAQTPSPV*FDSLLG
Trigger: CCCCAACAGGCTGTCAAACAAAACCGGAGAGGGGGT...CTGTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCTGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS GCA 90 bp GGTCCACACTGGGGGCCGGCTGGTTGGGCTCTGGGTTCAGGTGGTTaGCGGAAGCTTCTTGCACATGGAGCCCAGGACCTTCATAGAAGG +
Preference number: 5 (lower is better)
Translates to: GPHWGPAGWALGSGG*RKLLAHGAQDLHRR
Trigger: CCTTCTATGAAGGTCCTGGGCTCCATGTGCAAGAAGCTTCCGGCAACCACCTGAACCCAGAGCCCAACCAGCCGGCCCCCAGTGTGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000594866.2
CDS CCA 90 bp CAGGAGAGCCCAGGATGTCATCTTCCAGGAAGTCTAGGTCCACACTaGGGGCCGGCTGGTTGGGCTCTGGGTTCAGGTGGTTGCCGGAAG +
Preference number: 5 (lower is better)
Translates to: QESPGCHLPGSLGPH*GPAGWALGSGGCRK
Trigger: CTTCCGGCAACCACCTGAACCCAGAGCCCAACCAGCCGGCCCCCAGTGTGGACCTAGACTTCCTGGAAGATGACATCCTGGGCTCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396720.7
ENST00000594866.2
ENST00000614245.2
CDS-3UTR CAA 90 bp CTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGAAAGACGATGCTGCTGCCTaGGTTCAGGAGGTGGACGCT +
Preference number: 5 (lower is better)
Translates to: LANTCACPPDRGAECARKDDAAA*VQEVDA
Trigger: AGCGTCCACCTCCTGAACCAAGGCAGCAGCATCGTC...TTTCCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp TGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACATGCGCGTGTCCCCCGGATTCAGGGTCGGGAGGTaGCTGGCAAAAGCCTTGTTC +
Preference number: 5 (lower is better)
Translates to: WHQPGGPIPGKHMRVSPGFRVGR*LAKALF
Trigger: GAACAAGGCTTTTGCCAGCAACCTCCCGACCCTGAA...TCCGGGGGACACGCGCATGTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp TGGCATCAACCCGGTGGCCCCATCCCTGGCAAACACATGCGCGTGTCCCCCGGATCGTCCGGCTTCTCCTaGGCCAGCTGTTTATCCAAG +
Preference number: 5 (lower is better)
Translates to: WHQPGGPIPGKHMRVSPGSSGFS*ASCLSK
Trigger: CTTGGATAAACAGCTGGCCAAGGAGAAGCCGGACGA...TCCGGGGGACACGCGCATGTGTTTGCCAGGGATGGGGCCACCGGGTTGATGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp CCATCCCTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCTCGTCCGGCTTCTCCTaGGCCAGCTGTTTATCCAAG +
Preference number: 5 (lower is better)
Translates to: PSLANTCACPPDRGAECASSGFS*ASCLSK
Trigger: CTTGGATAAACAGCTGGCCAAGGAGAAGCCGGACGA...GGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAGGGATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp TGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGAAATTGCCGGATCACAAGCTaGGTGGGCAGGTGTGGAGGG +
Preference number: 5 (lower is better)
Translates to: WQTHARVPRTEGQSVPGNCRITS*VGRCGG
Trigger: CCCTCCACACCTGCCCACCAAGCTTGTGATCCGGCA...ATTTCCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp TTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGGAGGCAGGAAGAACATTGATGGGCGGGCGGTaGCGGGAGGGCATGGGGCCG +
Preference number: 5 (lower is better)
Translates to: FCLRDFKIWRGRLEAGRTLMGGR*REGMGP
Trigger: CGGCCCCATGCCCTCCCGCAACCGCCCGCCCATCAA...TGTTCTTCCTGCCTCCAGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp CCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAACCCTTGTTTGACAGCCTGTaGGGGGCGGCGGGGAGAGGC +
Preference number: 5 (lower is better)
Translates to: PSEKPHRQDRHPERWHQPLFDSL*GAAGRG
Trigger: GCCTCTCCCCGCCGCCCCCAACAGGCTGTCAAACAA...GGGTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp TCCCTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGCTTGAGCCAAAGAGTTaGAGACCAGCCTGGGCAACG +
Preference number: 5 (lower is better)
Translates to: SLANTCACPPDRGAECARLEPKS*RPAWAT
Trigger: CGTTGCCCAGGCTGGTCTCAAACTCTTTGGCTCAAG...CCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614245.2
CDS-3UTR CAA 90 bp CCTCCACCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATGTGGCCGGTGGCTGCTaGAAGACGTTCGCTTGCAGC +
Preference number: 5 (lower is better)
Translates to: PPPSEKPHRQDRHPERWHVAGGC*KTFACS
Trigger: GCTGCAAGCGAACGTCTTCAAGCAGCCACCGGCCAC...ATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGGTGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp TTCAAAGTCGAGGGGTGGGCGTTCGAAATCTCTCACTCACTTGTGCACACACACTTGATGGGCGGGCGGTaGCGGGAGGGCATGGGGCCG +
Preference number: 5 (lower is better)
Translates to: FKVEGWAFEISHSLVHTHLMGGR*REGMGP
Trigger: CGGCCCCATGCCCTCCCGCAACCGCCCGCCCATCAA...GTGTGTGTGCACAAGTGAGTGAGAGATTTCGAACGCCCACCCCTCGACTTTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp AGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAACCCGGTGGCCGCTTCCTGCTTGATCTaGAGCTTGAGCCCGATGCGG +
Preference number: 5 (lower is better)
Translates to: RSHTDKTGTRSVGINPVAASCLI*SLSPMR
Trigger: CCGCATCGGGCTCAAGCTCAAGATCAAGCAGGAAGC...GGCCACCGGGTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp CACCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAACGGGTCCAGGGCCGTGTaGTGCACGACCTTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: HHLRSHTDKTGTRSVGINGSRAV*CTTLLS
Trigger: GCTCAGCAAGGTCGTGCACAACACGGCCCTGGACCC...GTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp TGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGAAATCCTCTCCGGTTTTGTTaGACAGCCTGTTGGGGGCGG +
Preference number: 5 (lower is better)
Translates to: WQTHARVPRTEGQSVPGNPLRFC*TACWGR
Trigger: CCGCCCCCAACAGGCTGTCAAACAAAACCGGAGAGG...ATTTCCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp AGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATCAACCCGGTGGCCTCTGGGTTCAGGTGGTaGCCGGAAGCTTCTTGCACA +
Preference number: 5 (lower is better)
Translates to: RSHTDKTGTRSVGINPVASGFRW*PEASCT
Trigger: TGTGCAAGAAGCTTCCGGCAACCACCTGAACCCAGA...GGCCACCGGGTTGATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp CCTCCACCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATTGCTTGATCTTGAGCTaGAGCCCGATGCGGCTCCGG +
Preference number: 5 (lower is better)
Translates to: PPPSEKPHRQDRHPERWHCLILS*SPMRLR
Trigger: CCGGAGCCGCATCGGGCTCAAGCTCAAGATCAAGCA...ATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGGTGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp TGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGAAATACCCCCTCTCCGGTTTaGTTTGACAGCCTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: WQTHARVPRTEGQSVPGNTPSPV*FDSLLG
Trigger: CCCCAACAGGCTGTCAAACAAAACCGGAGAGGGGGT...ATTTCCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS GCA 90 bp GGCTCTGGGTTCAGGTGGTTGCCGGAAGCTTCTTGCACATGGAGCTaGAGGCCGGGAAAGGTGGGAAGGAAAGAGCTGAGGTTAGCAAGG +
Preference number: 5 (lower is better)
Translates to: GSGFRWLPEASCTWS*RPGKVGRKELRLAR
Trigger: CCTTGCTAACCTCAGCTCTTTCCTTCCCACCTTTCCCGGCCTGCAGCTCCATGTGCAAGAAGCTTCCGGCAACCACCTGAACCCAGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614245.2
CDS CCA 90 bp TGTCATCTTCCAGGAAGTCTAGGTCCACACTGGGGGCCGGCTGGTTaGGCTCTGGGTTCAGGTGGTTGCCGGAAGCTTCTTGCACATGGA +
Preference number: 5 (lower is better)
Translates to: CHLPGSLGPHWGPAG*ALGSGGCRKLLAHG
Trigger: TCCATGTGCAAGAAGCTTCCGGCAACCACCTGAACCCAGAGCCCAACCAGCCGGCCCCCAGTGTGGACCTAGACTTCCTGGAAGATGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396720.7
ENST00000594866.2
ENST00000614245.2
CDS CCA 90 bp AGGATGTCATCTTCCAGGAAGTCTAGGTCCACACTGGGGGCCGGCTaGTTGGGCTCTGGGTTCAGGTGGTTGCCGGAAGCTTCTTGCACA +
Preference number: 5 (lower is better)
Translates to: RMSSSRKSRSTLGAG*LGSGFRWLPEASCT
Trigger: TGTGCAAGAAGCTTCCGGCAACCACCTGAACCCAGAGCCCAACCAGCCGGCCCCCAGTGTGGACCTAGACTTCCTGGAAGATGACATCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396720.7
ENST00000594866.2
ENST00000614245.2
CDS CCA 90 bp CGGGACTCCTCCAGGAGCAGGAGCCGATATTTATTGAGCATGGCCTaGGTGCGTTTCAGCAGCTGCGTGGAGACCGTCTCAAACTCCTCG +
Preference number: 5 (lower is better)
Translates to: RDSSRSRSRYLLSMA*VRFSSCVETVSNSS
Trigger: CGAGGAGTTTGAGACGGTCTCCACGCAGCTGCTGAAACGCACCCAGGCCATGCTCAATAAATATCGGCTCCTGCTCCTGGAGGAGTCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp TTCAAAGTCGAGGGGTGGGCGTTCGAAATCTCTCACTCACTTGTGCACACACACCCGGAGGAAGCGGCCTaGGCCACATTCAGGGTCGGG +
Preference number: 5 (lower is better)
Translates to: FKVEGWAFEISHSLVHTHPEEAA*ATFRVG
Trigger: CCCGACCCTGAATGTGGCCAAGGCCGCTTCCTCCGG...GTGTGTGTGCACAAGTGAGTGAGAGATTTCGAACGCCCACCCCTCGACTTTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp TATCTTACAGTACTAGTTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTTCGGACTTGCGCCGCTaGGCAGGGGGCAGCCCGGGC +
Preference number: 5 (lower is better)
Translates to: YLTVLVLSPRFQNLARAASDLRR*AGGSPG
Trigger: GCCCGGGCTGCCCCCTGCCAAGCGGCGCAAGTCCGA...AGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAACTAGTACTGTAAGATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp AGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTGCCTGCGGGCACAGCACGAAATCTCTCACTCACTaGTGCACACACACACACACA +
Preference number: 5 (lower is better)
Translates to: RSRSWTCGCHTGACGHSTKSLTH*CTHTHT
Trigger: TGTGTGTGTGTGTGTGCACAAGTGAGTGAGAGATTT...CGTGCTGTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS CCA 90 bp TGGTTGGGCTCTGGGTTCAGGTGGTTGCCGGAAGCTTCTTGCACATaGAGCTGCAGGCCGGGAAAGGTGGGAAGGAAAGAGCTGAGGTTA +
Preference number: 5 (lower is better)
Translates to: WLGSGFRWLPEASCT*SCRPGKVGRKELRL
Trigger: TAACCTCAGCTCTTTCCTTCCCACCTTTCCCGGCCTGCAGCTCCATGTGCAAGAAGCTTCCGGCAACCACCTGAACCCAGAGCCCAACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614245.2
CDS-3UTR CAA 90 bp CCAGCAACCCAGCTGAAGCAGGCGGCAGGGAAGGAGGCCTTTGTGACTCAAATACGTGATGTTGGCCTCTaGGAGGCTCTGCTGGAGGAT +
Preference number: 5 (lower is better)
Translates to: PATQLKQAAGKEAFVTQIRDVGL*EALLED
Trigger: ATCCTCCAGCAGAGCCTCCAAGAGGCCAACATCACG...TATTTGAGTCACAAAGGCCTCCTTCCCTGCCGCCTGCTTCAGCTGGGTTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp TATCTTACAGTACTAGTTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTAGGTTCTGCGGGGCCTaGGGCTGCTGCGGGAGCGCC +
Preference number: 5 (lower is better)
Translates to: YLTVLVLSPRFQNLARAARFCGA*GCCGSA
Trigger: GGCGCTCCCGCAGCAGCCCAAGGCCCCGCAGAACCT...AGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAACTAGTACTGTAAGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp CCTCCACCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATTTCAGGCCACTCAGTTaGCTCTCATACTGCAGCCCG +
Preference number: 5 (lower is better)
Translates to: PPPSEKPHRQDRHPERWHFRPLS*LSYCSP
Trigger: CGGGCTGCAGTATGAGAGCAAACTGAGTGGCCTGAA...ATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGGTGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp CCATCCCTGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAAATCTCTCACTCACTaGTGCACACACACACACACA +
Preference number: 5 (lower is better)
Translates to: PSLANTCACPPDRGAECAKSLTH*CTHTHT
Trigger: TGTGTGTGTGTGTGTGCACAAGTGAGTGAGAGATTT...GGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAGGGATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp AGGTCACGGAGCTGGACGTGCGGATGTCACACGGGTGCCTGCGGGCACAGCACGCCCCAGTTTCTTGTTTaGCTCAGATTTCAAAGTCGA +
Preference number: 5 (lower is better)
Translates to: RSRSWTCGCHTGACGHSTPQFLV*LRFQSR
Trigger: TCGACTTTGAAATCTGAGCAAAACAAGAAACTGGGG...CGTGCTGTGCCCGCAGGCACCCGTGTGACATCCGCACGTCCAGCTCCGTGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS TCA 90 bp CAAGGGGCTACGCTTAGGCCACAGCTGCCGCAAAGAATGCTGAGGTaGCAGGGCAGCCACGTTCAAGAAAGAACATTCCCTCCTGGCATG +
Preference number: 5 (lower is better)
Translates to: QGATLRPQLPQRMLR*QGSHVQERTFPPGM
Trigger: CATGCCAGGAGGGAATGTTCTTTCTTGAACGTGGCTGCCCTGTCACCTCAGCATTCTTTGCGGCAGCTGTGGCCTAAGCGTAGCCCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614245.2
CDS CCA 90 bp TGTGCAAATGCTCCAGGAAACAGGCTTCCTTGCTGGGCTGAAGCGTaGGGGGCTTCTTCAGGCCACTCAGTTTGCTCTCATACTGCAGCC +
Preference number: 5 (lower is better)
Translates to: CANAPGNRLPCWAEA*GASSGHSVCSHTAA
Trigger: GGCTGCAGTATGAGAGCAAACTGAGTGGCCTGAAGAAGCCCCCCACGCTTCAGCCCAGCAAGGAAGCCTGTTTCCTGGAGCATTTGCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp TCTTACAGTACTAGTTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGGACACTCAGGGCCTTGTaGACCACGTCCTGGGGCGGC +
Preference number: 5 (lower is better)
Translates to: SYSTSFVSEISKSGAGGWTLRAL*TTSWGG
Trigger: GCCGCCCCAGGACGTGGTCAACAAGGCCCTGAGTGT...CCAGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAACTAGTACTGTAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp TTCAAAGTCGAGGGGTGGGCGTTCGAAATCTCTCACTCACTTGTGCACACACACGTGTTGTGCACGACCTaGCTGAGCCCGGCTTCCTGC +
Preference number: 5 (lower is better)
Translates to: FKVEGWAFEISHSLVHTHVLCTT*LSPASC
Trigger: GCAGGAAGCCGGGCTCAGCAAGGTCGTGCACAACAC...GTGTGTGTGCACAAGTGAGTGAGAGATTTCGAACGCCCACCCCTCGACTTTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS TCA 90 bp GTTAGCAAGGGGCTACGCTTAGGCCACAGCTGCCGCAAAGAATGCTaGGGTGACAGGGCAGCCACGTTCAAGAAAGAACATTCCCTCCTG +
Preference number: 5 (lower is better)
Translates to: VSKGLRLGHSCRKEC*GDRAATFKKEHSLL
Trigger: CAGGAGGGAATGTTCTTTCTTGAACGTGGCTGCCCTGTCACCTCAGCATTCTTTGCGGCAGCTGTGGCCTAAGCGTAGCCCCTTGCTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614245.2
CDS TCA 90 bp TGGCCAGCTGTTTATCCAAGGCAAGGGTGGTCTTCTCCTCCTGAATaGACATTCGGTCGATCATTACCATCTCCGCTGAGGGGCTCACCC +
Preference number: 5 (lower is better)
Translates to: WPAVYPRQGWSSPPE*TFGRSLPSPLRGSP
Trigger: GGGTGAGCCCCTCAGCGGAGATGGTAATGATCGACCGAATGTTCATTCAGGAGGAGAAGACCACCCTTGCCTTGGATAAACAGCTGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp TCTTACAGTACTAGTTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGGCCTCTCCGGTTTTGTTaGACAGCCTGTTGGGGGCGG +
Preference number: 5 (lower is better)
Translates to: SYSTSFVSEISKSGAGGWPLRFC*TACWGR
Trigger: CCGCCCCCAACAGGCTGTCAAACAAAACCGGAGAGG...CCAGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAACTAGTACTGTAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp TCTTACAGTACTAGTTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGGGTTGCCGGAAGCTTCTaGCACATGGAGCTGCAGGCC +
Preference number: 5 (lower is better)
Translates to: SYSTSFVSEISKSGAGGWVAGSF*HMELQA
Trigger: GGCCTGCAGCTCCATGTGCAAGAAGCTTCCGGCAAC...CCAGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAACTAGTACTGTAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614245.2
CDS TCA 90 bp TCCTTGGCCAGCTGTTTATCCAAGGCAAGGGTGGTCTTCTCCTCCTaGATGAACATTCGGTCGATCATTACCATCTCCGCTGAGGGGCTC +
Preference number: 5 (lower is better)
Translates to: SLASCLSKARVVFSS*MNIRSIITISAEGL
Trigger: GAGCCCCTCAGCGGAGATGGTAATGATCGACCGAATGTTCATTCAGGAGGAGAAGACCACCCTTGCCTTGGATAAACAGCTGGCCAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp TATCTTACAGTACTAGTTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTCTTGAAGACGTTCGCTaGCAGCGCAGGCGCGGGGAA +
Preference number: 5 (lower is better)
Translates to: YLTVLVLSPRFQNLARAALEDVR*QRRRGE
Trigger: TTCCCCGCGCCTGCGCTGCAAGCGAACGTCTTCAAG...AGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAACTAGTACTGTAAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp TGGCAAACACATGCGCGTGTCCCCCGGACAGAGGGGCAGAGTGTGCCAGGAAATCCCCAGTTTCTTGTTTaGCTCAGATTTCAAAGTCGA +
Preference number: 5 (lower is better)
Translates to: WQTHARVPRTEGQSVPGNPQFLV*LRFQSR
Trigger: TCGACTTTGAAATCTGAGCAAAACAAGAAACTGGGG...ATTTCCTGGCACACTCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp TCTTACAGTACTAGTTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTGGAGGAGCCGATATTTATaGAGCATGGCCTGGGTGCGT +
Preference number: 5 (lower is better)
Translates to: SYSTSFVSEISKSGAGGWRSRYL*SMAWVR
Trigger: ACGCACCCAGGCCATGCTCAATAAATATCGGCTCCT...CCAGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAACTAGTACTGTAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp CCTCCACCATCTGAGAAGCCACACAGACAAGACAGGCACCCGGAGCGTTGGCATGAAGACCCCAGTTTCTaGTTTTGCTCAGATTTCAAA +
Preference number: 5 (lower is better)
Translates to: PPPSEKPHRQDRHPERWHEDPSF*FCSDFK
Trigger: TTTGAAATCTGAGCAAAACAAGAAACTGGGGTCTTC...ATGCCAACGCTCCGGGTGCCTGTCTTGTCTGTGTGGCTTCTCAGATGGTGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp CCAGCAACCCAGCTGAAGCAGGCGGCAGGGAAGGAGGCCTTTGTGACTCAAATAGAAGACCCCAGTTTCTaGTTTTGCTCAGATTTCAAA +
Preference number: 5 (lower is better)
Translates to: PATQLKQAAGKEAFVTQIEDPSF*FCSDFK
Trigger: TTTGAAATCTGAGCAAAACAAGAAACTGGGGTCTTC...TATTTGAGTCACAAAGGCCTCCTTCCCTGCCGCCTGCTTCAGCTGGGTTGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS-3UTR CAA 90 bp TATCTTACAGTACTAGTTTTGTCTCCGAGATTTCAAAATCTGGCGCGGGCGGCTTTGCTGGCAAAAGCCTaGTTCTCGGCTGGAAGCAGA +
Preference number: 5 (lower is better)
Translates to: YLTVLVLSPRFQNLARAALLAKA*FSAGSR
Trigger: TCTGCTTCCAGCCGAGAACAAGGCTTTTGCCAGCAA...AGCCGCCCGCGCCAGATTTTGAAATCTCGGAGACAAAACTAGTACTGTAAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS GCA 90 bp CCCATCGATTTCACTCCAGAAATACTAGTGTGTTTGATCACACAGTaGTTCCCCAAACCCACTGGGGGTAAATCAGAAGACAGCATTGAG +
Preference number: 5 (lower is better)
Translates to: PIDFTPEILVCLITQ*FPKPTGGKSEDSIE
Trigger: CTCAATGCTGTCTTCTGATTTACCCCCAGTGGGTTTGGGGAAGCACTGTGTGATCAAACACACTAGTATTTCTGGAGTGAAATCGATGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602258.1
CDS GCA 72 bp AGCCACGGCCGCTGCCCCTCCAGCGCCCGTCGGGCCTaGCCCGCCATCCGCAGGCTGCAGGGTGGGCAGCTG +
Preference number: 6 (lower is better)
Translates to: SHGRCPSSARRA*PAIRRLQGGQL
Trigger: CAGCTGCCCACCCTGCAGCCTGCGGATGGCGGGGCAGGCCCGACGGGCGCTGGAGGGGCAGCGGCCGTGGCT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS GCA 72 bp CCAGAAGGGGCCGGCCGGCCGGGCCGGTCAGCGCACTaGCTGATCGCATGGCGGCCGCTCGGCAGCCGCTGC +
Preference number: 6 (lower is better)
Translates to: PEGAGRPGRSAH*LIAWRPLGSRC
Trigger: GCAGCGGCTGCCGAGCGGCCGCCATGCGATCAGGCAGTGCGCTGACCGGCCCGGCCGGCCGGCCCCTTCTGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594866.2
CDS GCA 72 bp TGCGCTCGGGGGCGGCAGGCGGCGGGTGGTCCACCGTaGCGTTCATCTGGCCCGTGGGCGGCGGTGGTGGTG +
Preference number: 6 (lower is better)
Translates to: CARGRQAAGGPP*RSSGPWAAVVV
Trigger: CACCACCACCGCCGCCCACGGGCCAGATGAACGGCACGGTGGACCACCCGCCGCCTGCCGCCCCCGAGCGCA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396720.7
ENST00000602258.1
ENST00000614245.2
CDS GCA 72 bp CCAGCGCCCGTCGGGCCTGCCCCGCCATCCGCAGGCTaGAGGGTGGGCAGCTGGAAGGGACCCAGGTCCAGC +
Preference number: 6 (lower is better)
Translates to: PAPVGPAPPSAG*RVGSWKGPRSS
Trigger: GCTGGACCTGGGTCCCTTCCAGCTGCCCACCCTGCAGCCTGCGGATGGCGGGGCAGGCCCGACGGGCGCTGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS CAA 72 bp AGCTCGCGGATGAGCCCGCTGGTGGCCTCGTCCACTTaGGCGGGCAGCGGCGCCGGGCTGCCTCCCCGTGCC +
Preference number: 6 (lower is better)
Translates to: SSRMSPLVASST*AGSGAGLPPRA
Trigger: GGCACGGGGAGGCAGCCCGGCGCCGCTGCCCGCCAAAGTGGACGAGGCCACCAGCGGGCTCATCCGCGAGCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396720.7
ENST00000602258.1
ENST00000614245.2
CDS GCA 72 bp CCAGGCCCAGTGTGGCCGCCGTGGCACCCCCAGGGCTaGCATTGGGCAGGCCTTGGAGGCCCGGGATGGGCT +
Preference number: 6 (lower is better)
Translates to: PGPVWPPWHPQG*HWAGLGGPGWA
Trigger: AGCCCATCCCGGGCCTCCAAGGCCTGCCCAATGGCAGCCCTGGGGGTGCCACGGCGGCCACACTGGGCCTGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS GCA 72 bp TGCGGCGGGGCCGCTCCGGTGGTGGTGGCCGGTGGCTaGTTGAAGACGTTCGCTTGCAGCGCAGGCGCGGGG +
Preference number: 6 (lower is better)
Translates to: CGGAAPVVVAGG*LKTFACSAGAG
Trigger: CCCCGCGCCTGCGCTGCAAGCGAACGTCTTCAAGCAGCCACCGGCCACCACCACCGGAGCGGCCCCGCCGCA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS GCA 72 bp GGACGCCCGGGCCCAGGTGACCGAAGGGGAGCCGCCTaGCCCGCCGTGCCGGATCACAAGCTTGGTGGGCAG +
Preference number: 6 (lower is better)
Translates to: GRPGPGDRRGAA*PAVPDHKLGGQ
Trigger: CTGCCCACCAAGCTTGTGATCCGGCACGGCGGGGCAGGCGGCTCCCCTTCGGTCACCTGGGCCCGGGCGTCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396720.7
ENST00000602258.1
ENST00000614245.2
CDS GCA 72 bp AGAAGCTGGCCTGGTCCACGTCGGGCGACTCGGACTTaGGCCGCTTGGCAGGGGGCAGCCCGGGCGCCTCCC +
Preference number: 6 (lower is better)
Translates to: RSWPGPRRATRT*AAWQGAARAPP
Trigger: GGGAGGCGCCCGGGCTGCCCCCTGCCAAGCGGCGCAAGTCCGAGTCGCCCGACGTGGACCAGGCCAGCTTCT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396720.7
ENST00000602258.1
ENST00000614245.2
CDS CCA 72 bp GCTGGCCCACCACCTGGATGGGCGCCAGGCCCAGTGTaGCCGCCGTGGCACCCCCAGGGCTGCCATTGGGCA +
Preference number: 6 (lower is better)
Translates to: AGPPPGWAPGPV*PPWHPQGCHWA
Trigger: TGCCCAATGGCAGCCCTGGGGGTGCCACGGCGGCCACACTGGGCCTGGCGCCCATCCAGGTGGTGGGCCAGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS CCA 72 bp CGTCCTGGCGCCGAGGCCACCGTTGTGACTGGAGGGTaGGTAGGCCTCGGGCCTGTGCAGGGGCGGCGGGGA +
Preference number: 6 (lower is better)
Translates to: RPGAEATVVTGG*VGLGPVQGRRG
Trigger: TCCCCGCCGCCCCTGCACAGGCCCGAGGCCTACCCACCCTCCAGTCACAACGGTGGCCTCGGCGCCAGGACG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396720.7
ENST00000602258.1
ENST00000614245.2
CDS CAA 72 bp GAGAAGCTGGCCTGGTCCACGTCGGGCGACTCGGACTaGCGCCGCTTGGCAGGGGGCAGCCCGGGCGCCTCC +
Preference number: 6 (lower is better)
Translates to: EKLAWSTSGDSD*RRLAGGSPGAS
Trigger: GGAGGCGCCCGGGCTGCCCCCTGCCAAGCGGCGCAAGTCCGAGTCGCCCGACGTGGACCAGGCCAGCTTCTC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396720.7
ENST00000602258.1
ENST00000614245.2
CDS CAA 90 bp CTGTCGCTGGAGAAGCTGGCCTGGTCCACGTCGGGCGACTCGGACTaGCGCCGCTTGGCAGGGGGCAGCCCGGGCGCCTCCCAGTCGGGG +
Preference number: 6 (lower is better)
Translates to: LSLEKLAWSTSGDSD*RRLAGGSPGASQSG
Trigger: CCCCGACTGGGAGGCGCCCGGGCTGCCCCCTGCCAAGCGGCGCAAGTCCGAGTCGCCCGACGTGGACCAGGCCAGCTTCTCCAGCGACAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396720.7
ENST00000602258.1
ENST00000614245.2
CDS TCA 72 bp GCGGGGCCGCTCCGGTGGTGGTGGCCGGTGGCTGCTTaGAGACGTTCGCTTGCAGCGCAGGCGCGGGGAAGC +
Preference number: 6 (lower is better)
Translates to: AGPLRWWWPVAA*RRSLAAQARGS
Trigger: GCTTCCCCGCGCCTGCGCTGCAAGCGAACGTCTTCAAGCAGCCACCGGCCACCACCACCGGAGCGGCCCCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS CCA 72 bp GCCTTGTTGACCACGTCCTGGGGCGGCACCAGGGCCTaGTGGGTCAGCACGGTAGGCGGGCCCTGCAGCCCC +
Preference number: 6 (lower is better)
Translates to: ALLTTSWGGTRA*WVSTVGGPCSP
Trigger: GGGGCTGCAGGGCCCGCCTACCGTGCTGACCCACCAGGCCCTGGTGCCGCCCCAGGACGTGGTCAACAAGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS CAA 72 bp GGCGGGGCCGCTCCGGTGGTGGTGGCCGGTGGCTGCTaGAAGACGTTCGCTTGCAGCGCAGGCGCGGGGAAG +
Preference number: 6 (lower is better)
Translates to: GGAAPVVVAGGC*KTFACSAGAGK
Trigger: CTTCCCCGCGCCTGCGCTGCAAGCGAACGTCTTCAAGCAGCCACCGGCCACCACCACCGGAGCGGCCCCGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS GCA 72 bp GCCCAGGTGACCGAAGGGGAGCCGCCTGCCCCGCCGTaGCGGATCACAAGCTTGGTGGGCAGGTGTGGAGGG +
Preference number: 6 (lower is better)
Translates to: AQVTEGEPPAPP*RITSLVGRCGG
Trigger: CCCTCCACACCTGCCCACCAAGCTTGTGATCCGGCACGGCGGGGCAGGCGGCTCCCCTTCGGTCACCTGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396720.7
ENST00000602258.1
ENST00000614245.2
CDS CCA 72 bp TTGTTGACCACGTCCTGGGGCGGCACCAGGGCCTGGTaGGTCAGCACGGTAGGCGGGCCCTGCAGCCCCAGC +
Preference number: 6 (lower is better)
Translates to: LLTTSWGGTRAW*VSTVGGPCSPS
Trigger: GCTGGGGCTGCAGGGCCCGCCTACCGTGCTGACCCACCAGGCCCTGGTGCCGCCCCAGGACGTGGTCAACAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS CAA 90 bp CAGTGTGGCCGCCGTGGCACCCCCAGGGCTGCCATTGGGCAGGCCTaGGAGGCCCGGGATGGGCTGCAGTGTCACATTGCCCAGGCCCAC +
Preference number: 6 (lower is better)
Translates to: QCGRRGTPRAAIGQA*EARDGLQCHIAQAH
Trigger: GTGGGCCTGGGCAATGTGACACTGCAGCCCATCCCGGGCCTCCAAGGCCTGCCCAATGGCAGCCCTGGGGGTGCCACGGCGGCCACACTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS CAA 90 bp GGCCGCTCCGGTGGTGGTGGCCGGTGGCTGCTTGAAGACGTTCGCTaGCAGCGCAGGCGCGGGGAAGCCCGACAGCACCACGTTCTGGCC +
Preference number: 6 (lower is better)
Translates to: GRSGGGGRWLLEDVR*QRRRGEARQHHVLA
Trigger: GGCCAGAACGTGGTGCTGTCGGGCTTCCCCGCGCCTGCGCTGCAAGCGAACGTCTTCAAGCAGCCACCGGCCACCACCACCGGAGCGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS TCA 72 bp GCGTGGTGGCCACAGCGGCCGAGAGGTTCTTCTGGATaGCCAGGCCAGCCCCCTGTGGCGAGACACCGGCCG +
Preference number: 6 (lower is better)
Translates to: AWWPQRPRGSSG*PGQPPVARHRP
Trigger: CGGCCGGTGTCTCGCCACAGGGGGCTGGCCTGGTCATCCAGAAGAACCTCTCGGCCGCTGTGGCCACCACGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS TCA 72 bp GCTGAAGACGACAGGGGGCCGTGGCCGGGAAGCCGATaGCCCTCGGAAGAGGCTGCGATGGGGAGGCCGAGC +
Preference number: 6 (lower is better)
Translates to: AEDDRGPWPGSR*PSEEAAMGRPS
Trigger: GCTCGGCCTCCCCATCGCAGCCTCTTCCGAGGGTCATCGGCTTCCCGGCCACGGCCCCCTGTCGTCTTCAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396720.7
ENST00000602258.1
ENST00000614245.2
CDS TCA 72 bp GGTACAGCTCGTCCTCCACGGCCGCCAGCTCGCGGATaGGCCCGCTGGTGGCCTCGTCCACTTTGGCGGGCA +
Preference number: 6 (lower is better)
Translates to: GTARPPRPPARG*ARWWPRPLWRA
Trigger: TGCCCGCCAAAGTGGACGAGGCCACCAGCGGGCTCATCCGCGAGCTGGCGGCCGTGGAGGACGAGCTGTACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396720.7
ENST00000602258.1
ENST00000614245.2
CDS GCA 72 bp GCCGTGGCCGGGAAGCCGATGACCCTCGGAAGAGGCTaGGATGGGGAGGCCGAGCGAGCGGGAGGAAGACAC +
Preference number: 6 (lower is better)
Translates to: AVAGKPMTLGRG*DGEAERAGGRH
Trigger: GTGTCTTCCTCCCGCTCGCTCGGCCTCCCCATCGCAGCCTCTTCCGAGGGTCATCGGCTTCCCGGCCACGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396720.7
ENST00000602258.1
ENST00000614245.2
CDS CCA 72 bp AGCTGGGAGGTGGGCGTGTTGAGCGCCATGACGGGCTaGCCCACCACCTGGATGGGCGCCAGGCCCAGTGTG +
Preference number: 6 (lower is better)
Translates to: SWEVGVLSAMTG*PTTWMGARPSV
Trigger: CACACTGGGCCTGGCGCCCATCCAGGTGGTGGGCCAGCCCGTCATGGCGCTCAACACGCCCACCTCCCAGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS CCA 72 bp AGCGCAGGCGCGGGGAAGCCCGACAGCACCACGTTCTaGCCCGCCTTCCCCGCCGCCATGAACGTCAGGTTC +
Preference number: 6 (lower is better)
Translates to: SAGAGKPDSTTF*PAFPAAMNVRF
Trigger: GAACCTGACGTTCATGGCGGCGGGGAAGGCGGGCCAGAACGTGGTGCTGTCGGGCTTCCCCGCGCCTGCGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS CCA 72 bp GTGAGGATGGGGTTCGCGATGAGCTGTCCACCTGTGTaGGGGGCAGCGGCCGCCAGGATCTGCCCGCCCACG +
Preference number: 6 (lower is better)
Translates to: VRMGFAMSCPPV*GAAAARICPPT
Trigger: CGTGGGCGGGCAGATCCTGGCGGCCGCTGCCCCCCACACAGGTGGACAGCTCATCGCGAACCCCATCCTCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS CCA 72 bp TGGTCAACGTCCTGGCGCCGAGGCCACCGTTGTGACTaGAGGGTGGGTAGGCCTCGGGCCTGTGCAGGGGCG +
Preference number: 6 (lower is better)
Translates to: WSTSWRRGHRCD*RVGRPRACAGA
Trigger: CGCCCCTGCACAGGCCCGAGGCCTACCCACCCTCCAGTCACAACGGTGGCCTCGGCGCCAGGACGTTGACCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396720.7
ENST00000602258.1
ENST00000614245.2
CDS GCA 72 bp GTGGTGGTGGCCGGTGGCTGCTTGAAGACGTTCGCTTaGAGCGCAGGCGCGGGGAAGCCCGACAGCACCACG +
Preference number: 6 (lower is better)
Translates to: VVVAGGCLKTFA*SAGAGKPDSTT
Trigger: CGTGGTGCTGTCGGGCTTCCCCGCGCCTGCGCTGCAAGCGAACGTCTTCAAGCAGCCACCGGCCACCACCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS GCA 72 bp GGCGGGGGCTGGTGCACGGGGTCCAGGGCCGTGTTGTaGACGACCTTGCTGAGCCCGGCTTCCTGCTTGATC +
Preference number: 6 (lower is better)
Translates to: GGGWCTGSRAVL*TTLLSPASCLI
Trigger: GATCAAGCAGGAAGCCGGGCTCAGCAAGGTCGTGCACAACACGGCCCTGGACCCCGTGCACCAGCCCCCGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396720.7
ENST00000602258.1
ENST00000614245.2
CDS CCA 72 bp CGAGAGGTTCTTCTGGATGACCAGGCCAGCCCCCTGTaGCGAGACACCGGCCGACGCCAGCGTCACGGGCTC +
Preference number: 6 (lower is better)
Translates to: REVLLDDQASPL*RDTGRRQRHGL
Trigger: GAGCCCGTGACGCTGGCGTCGGCCGGTGTCTCGCCACAGGGGGCTGGCCTGGTCATCCAGAAGAACCTCTCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS CCA 72 bp TGGACCGCCGGGGCGCCAGGCAGTAGGAACTGGTTCTaGCCCGGCAGCATGTGCTGGGCGGGGATGACGATG +
Preference number: 6 (lower is better)
Translates to: WTAGAPGSRNWF*PGSMCWAGMTM
Trigger: CATCGTCATCCCCGCCCAGCACATGCTGCCGGGCCAGAACCAGTTCCTACTGCCTGGCGCCCCGGCGGTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS CAA 72 bp GGTGGTGGTGGCCGGTGGCTGCTTGAAGACGTTCGCTaGCAGCGCAGGCGCGGGGAAGCCCGACAGCACCAC +
Preference number: 6 (lower is better)
Translates to: GGGGRWLLEDVR*QRRRGEARQHH
Trigger: GTGGTGCTGTCGGGCTTCCCCGCGCCTGCGCTGCAAGCGAACGTCTTCAAGCAGCCACCGGCCACCACCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS CAA 90 bp GTGGGAGCCGAGGCGGCCCCCGCGCCTCCGAACACAGAGTTCCCATaGAGCGTGGTGGCCACAGCGGCCGAGAGGTTCTTCTGGATGACC +
Preference number: 6 (lower is better)
Translates to: VGAEAAPAPPNTEFP*SVVATAAERFFWMT
Trigger: GGTCATCCAGAAGAACCTCTCGGCCGCTGTGGCCACCACGCTCAATGGGAACTCTGTGTTCGGAGGCGCGGGGGCCGCCTCGGCTCCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS CAA 90 bp CTGGCCCGGCAGCATGTGCTGGGCGGGGATGACGATGCTGCTGCCTaGGTTCAGGAGGTGGACGCTCATGGGTTTGCTCAGGGCCCCGGG +
Preference number: 6 (lower is better)
Translates to: LARQHVLGGDDDAAA*VQEVDAHGFAQGPG
Trigger: CCCGGGGCCCTGAGCAAACCCATGAGCGTCCACCTCCTGAACCAAGGCAGCAGCATCGTCATCCCCGCCCAGCACATGCTGCCGGGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS GCA 72 bp CTGCCATTGGGCAGGCCTTGGAGGCCCGGGATGGGCTaGAGTGTCACATTGCCCAGGCCCACAGGCTGCAGG +
Preference number: 6 (lower is better)
Translates to: LPLGRPWRPGMG*SVTLPRPTGCR
Trigger: CCTGCAGCCTGTGGGCCTGGGCAATGTGACACTGCAGCCCATCCCGGGCCTCCAAGGCCTGCCCAATGGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS CCA 72 bp CAGGGCTGCCATTGGGCAGGCCTTGGAGGCCCGGGATaGGCTGCAGTGTCACATTGCCCAGGCCCACAGGCT +
Preference number: 6 (lower is better)
Translates to: QGCHWAGLGGPG*AAVSHCPGPQA
Trigger: AGCCTGTGGGCCTGGGCAATGTGACACTGCAGCCCATCCCGGGCCTCCAAGGCCTGCCCAATGGCAGCCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS CCA 72 bp GTGTCATCCTGCGGGCTGTCGCTGGAGAAGCTGGCCTaGTCCACGTCGGGCGACTCGGACTTGCGCCGCTTG +
Preference number: 6 (lower is better)
Translates to: VSSCGLSLEKLA*STSGDSDLRRL
Trigger: CAAGCGGCGCAAGTCCGAGTCGCCCGACGTGGACCAGGCCAGCTTCTCCAGCGACAGCCCGCAGGATGACAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396720.7
ENST00000602258.1
ENST00000614245.2
CDS CAA 72 bp GAGGCGGCCCCCGCGCCTCCGAACACAGAGTTCCCATaGAGCGTGGTGGCCACAGCGGCCGAGAGGTTCTTC +
Preference number: 6 (lower is better)
Translates to: EAAPAPPNTEFP*SVVATAAERFF
Trigger: GAAGAACCTCTCGGCCGCTGTGGCCACCACGCTCAATGGGAACTCTGTGTTCGGAGGCGCGGGGGCCGCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS CAA 90 bp CAGCTCAGCCTCGGCCTCCAGCGTCTGCTCCGTGATGTTGGCCTCTaGGAGGCTCTGCTGGAGGATGTCACAGGGCTGGTCAGCGCCCCC +
Preference number: 6 (lower is better)
Translates to: QLSLGLQRLLRDVGL*EALLEDVTGLVSAP
Trigger: GGGGGCGCTGACCAGCCCTGTGACATCCTCCAGCAGAGCCTCCAAGAGGCCAACATCACGGAGCAGACGCTGGAGGCCGAGGCTGAGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396720.7
ENST00000594866.2
ENST00000614245.2
CDS CAA 90 bp GGCGGGGGCTGGTGCACGGGGTCCAGGGCCGTGTTGTGCACGACCTaGCTGAGCCCGGCTTCCTGCTTGATCTTGAGCTTGAGCCCGATG +
Preference number: 6 (lower is better)
Translates to: GGGWCTGSRAVLCTT*LSPASCLILSLSPM
Trigger: CATCGGGCTCAAGCTCAAGATCAAGCAGGAAGCCGGGCTCAGCAAGGTCGTGCACAACACGGCCCTGGACCCCGTGCACCAGCCCCCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396720.7
ENST00000602258.1
ENST00000614245.2
CDS TCA 72 bp AGGCGGCCCCCGCGCCTCCGAACACAGAGTTCCCATTaGGCGTGGTGGCCACAGCGGCCGAGAGGTTCTTCT +
Preference number: 6 (lower is better)
Translates to: RRPPRLRTQSSH*AWWPQRPRGSS
Trigger: AGAAGAACCTCTCGGCCGCTGTGGCCACCACGCTCAATGGGAACTCTGTGTTCGGAGGCGCGGGGGCCGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS CCA 72 bp GGCGTGTCCACTCCAGGTCTACACAGGGCCCCCAGCTaGGGACTTGGAAAGGGTCCTCTTGGGGGCCAGCCT +
Preference number: 6 (lower is better)
Translates to: GVSTPGLHRAPS*GLGKGPLGGQP
Trigger: AGGCTGGCCCCCAAGAGGACCCTTTCCAAGTCCCCAGCTGGGGGCCCTGTGTAGACCTGGAGTGGACACGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000594866.2
CDS CCA 72 bp TTGAGCGTGGTGGCCACAGCGGCCGAGAGGTTCTTCTaGATGACCAGGCCAGCCCCCTGTGGCGAGACACCG +
Preference number: 6 (lower is better)
Translates to: LSVVATAAERFF*MTRPAPCGETP
Trigger: CGGTGTCTCGCCACAGGGGGCTGGCCTGGTCATCCAGAAGAACCTCTCGGCCGCTGTGGCCACCACGCTCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS CCA 72 bp AAGGGGAGGCGGCCCGGTGTTATCTGGTCAACGTCCTaGCGCCGAGGCCACCGTTGTGACTGGAGGGTGGGT +
Preference number: 6 (lower is better)
Translates to: KGRRPGVIWSTS*RRGHRCDWRVG
Trigger: ACCCACCCTCCAGTCACAACGGTGGCCTCGGCGCCAGGACGTTGACCAGATAACACCGGGCCGCCTCCCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396720.7
ENST00000602258.1
ENST00000614245.2
CDS CAA 72 bp CTGGGGGCCGGCTGGTTGGGCTCTGGGTTCAGGTGGTaGCCGGAAGCTTCTTGCACATGGAGCTGCAGGCCG +
Preference number: 6 (lower is better)
Translates to: LGAGWLGSGFRW*PEASCTWSCRP
Trigger: CGGCCTGCAGCTCCATGTGCAAGAAGCTTCCGGCAACCACCTGAACCCAGAGCCCAACCAGCCGGCCCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614245.2
CDS CAA 90 bp CCTGGCCCGGAGGAAGCGGCCTTGGCCACATTCAGGGTCGGGAGGTaGCTGGCAAAAGCCTTGTTCTCGGCTGGAAGCAGAGGAGGGAGG +
Preference number: 6 (lower is better)
Translates to: PGPEEAALATFRVGR*LAKALFSAGSRGGR
Trigger: CCTCCCTCCTCTGCTTCCAGCCGAGAACAAGGCTTTTGCCAGCAACCTCCCGACCCTGAATGTGGCCAAGGCCGCTTCCTCCGGGCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS CAA 90 bp AGGTCCACACTGGGGGCCGGCTGGTTGGGCTCTGGGTTCAGGTGGTaGCCGGAAGCTTCTTGCACATGGAGCTGCAGGCCGGGAAAGGTG +
Preference number: 6 (lower is better)
Translates to: RSTLGAGWLGSGFRW*PEASCTWSCRPGKV
Trigger: CACCTTTCCCGGCCTGCAGCTCCATGTGCAAGAAGCTTCCGGCAACCACCTGAACCCAGAGCCCAACCAGCCGGCCCCCAGTGTGGACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614245.2
CDS TCA 72 bp TCAGGATGCTGTCGATGGCGCTCTGCAGGTGCTCGGTaGGCGTGTCATCCTGCGGGCTGTCGCTGGAGAAGC +
Preference number: 6 (lower is better)
Translates to: SGCCRWRSAGAR*ACHPAGCRWRS
Trigger: GCTTCTCCAGCGACAGCCCGCAGGATGACACGCTCACCGAGCACCTGCAGAGCGCCATCGACAGCATCCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396720.7
ENST00000602258.1
ENST00000614245.2
CDS GCA 72 bp AGCGTCTGCTCCGTGATGTTGGCCTCTTGGAGGCTCTaGTGGAGGATGTCACAGGGCTGGTCAGCGCCCCCA +
Preference number: 6 (lower is better)
Translates to: SVCSVMLASWRL*WRMSQGWSAPP
Trigger: TGGGGGCGCTGACCAGCCCTGTGACATCCTCCAGCAGAGCCTCCAAGAGGCCAACATCACGGAGCAGACGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396720.7
ENST00000594866.2
ENST00000614245.2
CDS GCA 72 bp CCAGGCAGTAGGAACTGGTTCTGGCCCGGCAGCATGTaGTGGGCGGGGATGACGATGCTGCTGCCTTGGTTC +
Preference number: 6 (lower is better)
Translates to: PGSRNWFWPGSM*WAGMTMLLPWF
Trigger: GAACCAAGGCAGCAGCATCGTCATCCCCGCCCAGCACATGCTGCCGGGCCAGAACCAGTTCCTACTGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS GCA 72 bp GCCGTGTTGTGCACGACCTTGCTGAGCCCGGCTTCCTaGTTGATCTTGAGCTTGAGCCCGATGCGGCTCCGG +
Preference number: 6 (lower is better)
Translates to: AVLCTTLLSPAS*LILSLSPMRLR
Trigger: CCGGAGCCGCATCGGGCTCAAGCTCAAGATCAAGCAGGAAGCCGGGCTCAGCAAGGTCGTGCACAACACGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396720.7
ENST00000602258.1
ENST00000614245.2
CDS CCA 72 bp AACACGGGGCCCAGGCTCAGTGGGCCCGCCAGGTTCTaGTTTGTGAGGATGGGGTTCGCGATGAGCTGTCCA +
Preference number: 6 (lower is better)
Translates to: NTGPRLSGPARF*FVRMGFAMSCP
Trigger: TGGACAGCTCATCGCGAACCCCATCCTCACAAACCAGAACCTGGCGGGCCCACTGAGCCTGGGCCCCGTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS CCA 72 bp ACACTGGGGGCCGGCTGGTTGGGCTCTGGGTTCAGGTaGTTGCCGGAAGCTTCTTGCACATGGAGCTGCAGG +
Preference number: 6 (lower is better)
Translates to: TLGAGWLGSGFR*LPEASCTWSCR
Trigger: CCTGCAGCTCCATGTGCAAGAAGCTTCCGGCAACCACCTGAACCCAGAGCCCAACCAGCCGGCCCCCAGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614245.2
CDS CCA 72 bp TCGGCCTCCAGCGTCTGCTCCGTGATGTTGGCCTCTTaGAGGCTCTGCTGGAGGATGTCACAGGGCTGGTCA +
Preference number: 6 (lower is better)
Translates to: SASSVCSVMLAS*RLCWRMSQGWS
Trigger: TGACCAGCCCTGTGACATCCTCCAGCAGAGCCTCCAAGAGGCCAACATCACGGAGCAGACGCTGGAGGCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396720.7
ENST00000594866.2
ENST00000614245.2
CDS CCA 72 bp AAATCTCTCGAGAAGAGCCTTCGGCTGGGGCAGCGCTaGGAAGGGGGTGGTCACCATCTGGAAGGTCCGAGG +
Preference number: 6 (lower is better)
Translates to: KSLEKSLRLGQR*EGGGHHLEGPR
Trigger: CCTCGGACCTTCCAGATGGTGACCACCCCCTTCCCAGCGCTGCCCCAGCCGAAGGCTCTTCTCGAGAGATTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS CAA 72 bp TGGTGCACGGGGTCCAGGGCCGTGTTGTGCACGACCTaGCTGAGCCCGGCTTCCTGCTTGATCTTGAGCTTG +
Preference number: 6 (lower is better)
Translates to: WCTGSRAVLCTT*LSPASCLILSL
Trigger: CAAGCTCAAGATCAAGCAGGAAGCCGGGCTCAGCAAGGTCGTGCACAACACGGCCCTGGACCCCGTGCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396720.7
ENST00000602258.1
ENST00000614245.2
CDS CCA 72 bp CCAGGATGTCATCTTCCAGGAAGTCTAGGTCCACACTaGGGGCCGGCTGGTTGGGCTCTGGGTTCAGGTGGT +
Preference number: 6 (lower is better)
Translates to: PGCHLPGSLGPH*GPAGWALGSGG
Trigger: ACCACCTGAACCCAGAGCCCAACCAGCCGGCCCCCAGTGTGGACCTAGACTTCCTGGAAGATGACATCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396720.7
ENST00000594866.2
ENST00000614245.2
CDS CCA 72 bp AGCATGTGCTGGGCGGGGATGACGATGCTGCTGCCTTaGTTCAGGAGGTGGACGCTCATGGGTTTGCTCAGG +
Preference number: 6 (lower is better)
Translates to: SMCWAGMTMLLP*FRRWTLMGLLR
Trigger: CCTGAGCAAACCCATGAGCGTCCACCTCCTGAACCAAGGCAGCAGCATCGTCATCCCCGCCCAGCACATGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS CCA 72 bp CCGTCTCAAACTCCTCGTCCACTTTGTGGTAGTCACTaGGGGAGGGGAGGGCGCCCTGGTAGACATGGTAGG +
Preference number: 6 (lower is better)
Translates to: PSQTPRPLCGSH*GRGGRPGRHGR
Trigger: CCTACCATGTCTACCAGGGCGCCCTCCCCTCCCCCAGTGACTACCACAAAGTGGACGAGGAGTTTGAGACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS CAA 72 bp CAGCATGTGCTGGGCGGGGATGACGATGCTGCTGCCTaGGTTCAGGAGGTGGACGCTCATGGGTTTGCTCAG +
Preference number: 6 (lower is better)
Translates to: QHVLGGDDDAAA*VQEVDAHGFAQ
Trigger: CTGAGCAAACCCATGAGCGTCCACCTCCTGAACCAAGGCAGCAGCATCGTCATCCCCGCCCAGCACATGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS CAA 72 bp GCCACATTCAGGGTCGGGAGGTTGCTGGCAAAAGCCTaGTTCTCGGCTGGAAGCAGAGGAGGGAGGCCTGTG +
Preference number: 6 (lower is better)
Translates to: ATFRVGRLLAKA*FSAGSRGGRPV
Trigger: CACAGGCCTCCCTCCTCTGCTTCCAGCCGAGAACAAGGCTTTTGCCAGCAACCTCCCGACCCTGAATGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS TCA 72 bp TCCGGGACTCCTCCAGGAGCAGGAGCCGATATTTATTaGGCATGGCCTGGGTGCGTTTCAGCAGCTGCGTGG +
Preference number: 6 (lower is better)
Translates to: SGTPPGAGADIY*AWPGCVSAAAW
Trigger: CCACGCAGCTGCTGAAACGCACCCAGGCCATGCTCAATAAATATCGGCTCCTGCTCCTGGAGGAGTCCCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS GCA 72 bp AGGAAGCGGCCTTGGCCACATTCAGGGTCGGGAGGTTaGTGGCAAAAGCCTTGTTCTCGGCTGGAAGCAGAG +
Preference number: 6 (lower is better)
Translates to: RKRPWPHSGSGG*WQKPCSRLEAE
Trigger: CTCTGCTTCCAGCCGAGAACAAGGCTTTTGCCAGCAACCTCCCGACCCTGAATGTGGCCAAGGCCGCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS CCA 72 bp AAGCGGCCTTGGCCACATTCAGGGTCGGGAGGTTGCTaGCAAAAGCCTTGTTCTCGGCTGGAAGCAGAGGAG +
Preference number: 6 (lower is better)
Translates to: KRPWPHSGSGGC*QKPCSRLEAEE
Trigger: CTCCTCTGCTTCCAGCCGAGAACAAGGCTTTTGCCAGCAACCTCCCGACCCTGAATGTGGCCAAGGCCGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS CAA 72 bp GAGGAAGCGGCCTTGGCCACATTCAGGGTCGGGAGGTaGCTGGCAAAAGCCTTGTTCTCGGCTGGAAGCAGA +
Preference number: 6 (lower is better)
Translates to: EEAALATFRVGR*LAKALFSAGSR
Trigger: TCTGCTTCCAGCCGAGAACAAGGCTTTTGCCAGCAACCTCCCGACCCTGAATGTGGCCAAGGCCGCTTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS CAA 72 bp CTCCGGGACTCCTCCAGGAGCAGGAGCCGATATTTATaGAGCATGGCCTGGGTGCGTTTCAGCAGCTGCGTG +
Preference number: 6 (lower is better)
Translates to: LRDSSRSRSRYL*SMAWVRFSSCV
Trigger: CACGCAGCTGCTGAAACGCACCCAGGCCATGCTCAATAAATATCGGCTCCTGCTCCTGGAGGAGTCCCGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS CAA 90 bp ATGTCATCTTCCAGGAAGTCTAGGTCCACACTGGGGGCCGGCTGGTaGGGCTCTGGGTTCAGGTGGTTGCCGGAAGCTTCTTGCACATGG +
Preference number: 6 (lower is better)
Translates to: MSSSRKSRSTLGAGW*GSGFRWLPEASCTW
Trigger: CCATGTGCAAGAAGCTTCCGGCAACCACCTGAACCCAGAGCCCAACCAGCCGGCCCCCAGTGTGGACCTAGACTTCCTGGAAGATGACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396720.7
ENST00000594866.2
ENST00000614245.2
CDS GCA 72 bp TTCAGGTGGTTGCCGGAAGCTTCTTGCACATGGAGCTaGAGGCCGGGAAAGGTGGGAAGGAAAGAGCTGAGG +
Preference number: 6 (lower is better)
Translates to: FRWLPEASCTWS*RPGKVGRKELR
Trigger: CCTCAGCTCTTTCCTTCCCACCTTTCCCGGCCTGCAGCTCCATGTGCAAGAAGCTTCCGGCAACCACCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614245.2
CDS CCA 72 bp GCTCCAGGAAACAGGCTTCCTTGCTGGGCTGAAGCGTaGGGGGCTTCTTCAGGCCACTCAGTTTGCTCTCAT +
Preference number: 6 (lower is better)
Translates to: APGNRLPCWAEA*GASSGHSVCSH
Trigger: ATGAGAGCAAACTGAGTGGCCTGAAGAAGCCCCCCACGCTTCAGCCCAGCAAGGAAGCCTGTTTCCTGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS CAA 72 bp GACTGCACCCTGGACCCTCCAATCCTCAGGATAGGCTaGGTGAGACCCTCTTCAGCAAGGCCCAAATTCCCC +
Preference number: 6 (lower is better)
Translates to: DCTLDPPILRIG*VRPSSARPKFP
Trigger: GGGGAATTTGGGCCTTGCTGAAGAGGGTCTCACCAAGCCTATCCTGAGGATTGGAGGGTCCAGGGTGCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602258.1
CDS TCA 72 bp CTCATCATCCATCGCCACTGCGCTACAAACGAATCATaGAGGGAAGGAGGGGCGTGTCCACTCCAGGTCTAC +
Preference number: 6 (lower is better)
Translates to: LIIHRHCATNES*REGGACPLQVY
Trigger: GTAGACCTGGAGTGGACACGCCCCTCCTTCCCTTCATGATTCGTTTGTAGCGCAGTGGCGATGGATGATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000594866.2
CDS TCA 72 bp ACGCTTAGGCCACAGCTGCCGCAAAGAATGCTGAGGTaGCAGGGCAGCCACGTTCAAGAAAGAACATTCCCT +
Preference number: 6 (lower is better)
Translates to: TLRPQLPQRMLR*QGSHVQERTFP
Trigger: AGGGAATGTTCTTTCTTGAACGTGGCTGCCCTGTCACCTCAGCATTCTTTGCGGCAGCTGTGGCCTAAGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614245.2
CDS GCA 72 bp TATTTATTGAGCATGGCCTGGGTGCGTTTCAGCAGCTaGGTGGAGACCGTCTCAAACTCCTCGTCCACTTTG +
Preference number: 6 (lower is better)
Translates to: YLLSMAWVRFSS*VETVSNSSSTL
Trigger: CAAAGTGGACGAGGAGTTTGAGACGGTCTCCACGCAGCTGCTGAAACGCACCCAGGCCATGCTCAATAAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS CCA 72 bp GAGACTTCAGACTCGCTCCTGGCCCCTCCTTCACTATaGCCACCCCTTTGCACTCATTTAAGTACCAATGAC +
Preference number: 6 (lower is better)
Translates to: ETSDSLLAPPSL*PPLCTHLSTND
Trigger: GTCATTGGTACTTAAATGAGTGCAAAGGGGTGGCCATAGTGAAGGAGGGGCCAGGAGCGAGTCTGAAGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602258.1
CDS TCA 72 bp CACTGTCAAGCTTCTCGGATCCATGCAAGAAGTCATTaGGGGCCTGTGGGTCACAAATCACGTCTAGTAAGC +
Preference number: 6 (lower is better)
Translates to: HCQASRIHARSH*GPVGHKSRLVS
Trigger: GCTTACTAGACGTGATTTGTGACCCACAGGCCCTCAATGACTTCTTGCATGGATCCGAGAAGCTTGACAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000594866.2
CDS TCA 72 bp GTTTATCCAAGGCAAGGGTGGTCTTCTCCTCCTGAATaGACATTCGGTCGATCATTACCATCTCCGCTGAGG +
Preference number: 6 (lower is better)
Translates to: VYPRQGWSSPPE*TFGRSLPSPLR
Trigger: CCTCAGCGGAGATGGTAATGATCGACCGAATGTTCATTCAGGAGGAGAAGACCACCCTTGCCTTGGATAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS TCA 72 bp AGCTGTTTATCCAAGGCAAGGGTGGTCTTCTCCTCCTaGATGAACATTCGGTCGATCATTACCATCTCCGCT +
Preference number: 6 (lower is better)
Translates to: SCLSKARVVFSS*MNIRSIITISA
Trigger: AGCGGAGATGGTAATGATCGACCGAATGTTCATTCAGGAGGAGAAGACCACCCTTGCCTTGGATAAACAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000614245.2
CDS CAA 72 bp TCACTGTCAAGCTTCTCGGATCCATGCAAGAAGTCATaGAGGGCCTGTGGGTCACAAATCACGTCTAGTAAG +
Preference number: 6 (lower is better)
Translates to: SLSSFSDPCKKS*RACGSQITSSK
Trigger: CTTACTAGACGTGATTTGTGACCCACAGGCCCTCAATGACTTCTTGCATGGATCCGAGAAGCTTGACAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396720.7
ENST00000594866.2
CDS CAA 72 bp ATACCCATCGATTTCACTCCAGAAATACTAGTGTGTTaGATCACACAGTGCTTCCCCAAACCCACTGGGGGT +
Preference number: 6 (lower is better)
Translates to: IPIDFTPEILVC*ITQCFPKPTGG
Trigger: ACCCCCAGTGGGTTTGGGGAAGCACTGTGTGATCAAACACACTAGTATTTCTGGAGTGAAATCGATGGGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602258.1
CDS CAA 90 bp CTACTCTGGATACCCATCGATTTCACTCCAGAAATACTAGTGTGTTaGATCACACAGTGCTTCCCCAAACCCACTGGGGGTAAATCAGAA +
Preference number: 6 (lower is better)
Translates to: LLWIPIDFTPEILVC*ITQCFPKPTGGKSE
Trigger: TTCTGATTTACCCCCAGTGGGTTTGGGGAAGCACTGTGTGATCAAACACACTAGTATTTCTGGAGTGAAATCGATGGGTATCCAGAGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602258.1
CDS GCA 72 bp TTCACTCCAGAAATACTAGTGTGTTTGATCACACAGTaGTTCCCCAAACCCACTGGGGGTAAATCAGAAGAC +
Preference number: 6 (lower is better)
Translates to: FTPEILVCLITQ*FPKPTGGKSED
Trigger: GTCTTCTGATTTACCCCCAGTGGGTTTGGGGAAGCACTGTGTGATCAAACACACTAGTATTTCTGGAGTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602258.1