RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BCL2L13 (Homo sapiens)

Ensembl gene IDs: ENSG00000099968

Ensembl transcript IDs: ENST00000317582.10, ENST00000337612.9, ENST00000355028.4, ENST00000399777.1, ENST00000399781.5, ENST00000399782.5, ENST00000418951.6, ENST00000464649.1, ENST00000479296.1, ENST00000485631.1, ENST00000493680.5, ENST00000498133.5, ENST00000538149.5, ENST00000543133.5, ENST00000611738.4, ENST00000616863.4, ENST00000618481.4

Found 1702 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCCAACTCTGGCTAGCTGACAGTGACACAGGTAAGCTCTCAGACTaGCAGGAAGTGGTCACAGTTGGAGACTCTGGGGGACTGACTTGT +
Preference number: 1 (lower is better)
Translates to: CQLWLADSDTGKLSD*QEVVTVGDSGGLTC
Trigger: ACAAGTCAGTCCCCCAGAGTCTCCAACTGTGACCACTTCCTGGCAGTCTGAGAGCTTACCTGTGTCACTGTCAGCTAGCCAGAGTTGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR CCA 90 bp ACGGGACATTTGGCAATGTCTAGAGACATTTTCGTTTGTCATCTCTaGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACAC +
Preference number: 1 (lower is better)
Translates to: TGHLAMSRDIFVCHL*EGVPLASSGWSPPH
Trigger: GTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCTAGACATTGCCAAATGTCCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR TCA 90 bp TCTCAGACTGCCAGGAAGTGGTCACAGTTGGAGACTCTGGGGGACTaGCTTGTCCAGAGTTGTCGCTGGGCAGGATGTAAATGTCATTGC +
Preference number: 1 (lower is better)
Translates to: SQTARKWSQLETLGD*LVQSCRWAGCKCHC
Trigger: GCAATGACATTTACATCCTGCCCAGCGACAACTCTGGACAAGTCAGTCCCCCAGAGTCTCCAACTGTGACCACTTCCTGGCAGTCTGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR TCA 90 bp CCTCCTTTCAGCAGCTCAGAGATGAACCTGGCTTCGATTGGTGCTTaGATGCGCTCAGCCAATGGGTGTGAGGATCCAGAACTGGCAAGT +
Preference number: 1 (lower is better)
Translates to: PPFSSSEMNLASIGA*MRSANGCEDPELAS
Trigger: ACTTGCCAGTTCTGGATCCTCACACCCATTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGGTTCATCTCTGAGCTGCTGAAAGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR GCA 90 bp CCGTTGCTGTCTAAGCTTTTCACTTCTTCAGGATCCATTGCAATCTaGTGCCAGGACTCAGGGCCTAGTGACACTGGCAGGCTTTCTGTG +
Preference number: 1 (lower is better)
Translates to: PLLSKLFTSSGSIAI*CQDSGPSDTGRLSV
Trigger: CACAGAAAGCCTGCCAGTGTCACTAGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGTGAAAAGCTTAGACAGCAACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR TCA 90 bp TGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATGTTaGGCAGAAGTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCA +
Preference number: 1 (lower is better)
Translates to: CPTSSPNMPNMPLPC*AEVPNYPRVFHKCP
Trigger: TGGACATTTGTGGAACACTCTGGGATAATTGGGGACTTCTGCTCAACATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR TCA 90 bp CGGTCCTGGAGGGGGTGCTTTACCCCTAAGATTCTCAATTTAGCATaGGCGGAGGCCCTTGGGATTTACAGTCAGATGAATGTGAATGCC +
Preference number: 1 (lower is better)
Translates to: RSWRGCFTPKILNLA*AEALGIYSQMNVNA
Trigger: GGCATTCACATTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAATCTTAGGGGTAAAGCACCCCCTCCAGGACCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR GCA 90 bp TTGCTGTCTAAGCTTTTCACTTCTTCAGGATCCATTGCAATCTGCTaGCAGGACTCAGGGCCTAGTGACACTGGCAGGCTTTCTGTGTGC +
Preference number: 1 (lower is better)
Translates to: LLSKLFTSSGSIAIC*QDSGPSDTGRLSVC
Trigger: GCACACAGAAAGCCTGCCAGTGTCACTAGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGTGAAAAGCTTAGACAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR GCA 90 bp ACAGCAGCCTCTTCCATGCCCTCGGGCACCTCTTCTTTCTCCACGTaGACAATGTCAGAATTAGAGGAGTTGTTCTCACTCTTCTCTCCA +
Preference number: 1 (lower is better)
Translates to: TAASSMPSGTSSFST*TMSELEELFSLFSP
Trigger: TGGAGAGAAGAGTGAGAACAACTCCTCTAATTCTGACATTGTGCACGTGGAGAAAGAAGAGGTGCCCGAGGGCATGGAAGAGGCTGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR GCA 90 bp AATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTaGCATGTTGAGCAGAAGTCCCCAATTATCCCAGAGTGTTCCACA +
Preference number: 1 (lower is better)
Translates to: NVNAPPQALTCLTCH*HVEQKSPIIPECST
Trigger: TGTGGAACACTCTGGGATAATTGGGGACTTCTGCTCAACATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR GCA 90 bp CAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATaGCACTGCCATGTTGAGCAGAAGTCCCCAATTATCCCAGAGTGT +
Preference number: 1 (lower is better)
Translates to: QMNVNAPPQALTCLT*HCHVEQKSPIIPEC
Trigger: ACACTCTGGGATAATTGGGGACTTCTGCTCAACATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR GCA 90 bp CTCTGCCGAATAGTCCTCCAGGTATGTCACGCCAAACTGCAGCAGTaGGCTCAAAGGTTCTTGACCACGTCTTGTCAATTCCAAAAGCAT +
Preference number: 1 (lower is better)
Translates to: LCRIVLQVCHAKLQQ*AQRFLTTSCQFQKH
Trigger: ATGCTTTTGGAATTGACAAGACGTGGTCAAGAACCTTTGAGCGCACTGCTGCAGTTTGGCGTGACATACCTGGAGGACTATTCGGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498133.5
3UTR TCA 90 bp GTCATTGCTATCTTCTGCAGTGATTCCAGGGTATTCCTCCTCCTCTaGCTCAAGACTAAACACAGTGCCCCAGCCACCTTGCTGAATGAT +
Preference number: 1 (lower is better)
Translates to: VIAIFCSDSRVFLLL*LKTKHSAPATLLND
Trigger: ATCATTCAGCAAGGTGGCTGGGGCACTGTGTTTAGTCTTGAGTCAGAGGAGGAGGAATACCCTGGAATCACTGCAGAAGATAGCAATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399777.1
ENST00000498133.5
3UTR GCA 90 bp CAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTTCAGTTGTTGCTaGTTTCACCTCTTCTTCATCAAGTTCTACAAACAGAGATGTAGC +
Preference number: 1 (lower is better)
Translates to: QCGDHLLHFSRFSCC*FHLFFIKFYKQRCS
Trigger: GCTACATCTCTGTTTGTAGAACTTGATGAAGAAGAGGTGAAAGCAGCAACAACTGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR TCA 90 bp CTTACTGTCATATTATTGAGGGAATCAGCGCAAAGCCTGAGGAAATaGACAGTAGCTGTGGGTCAAAGCCATGTCTCCAGGTTCACGGCT +
Preference number: 1 (lower is better)
Translates to: LTVILLRESAQSLRK*TVAVGQSHVSRFTA
Trigger: AGCCGTGAACCTGGAGACATGGCTTTGACCCACAGCTACTGTTCATTTCCTCAGGCTTTGCGCTGATTCCCTCAATAATATGACAGTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR TCA 90 bp TCCAGGTATGTCACGCCAAACTGCAGCAGTGCGCTCAAAGGTTCTTaGCCACGTCTTGTCAATTCCAAAAGCATTTGTCGTAGCAAAACC +
Preference number: 1 (lower is better)
Translates to: SRYVTPNCSSALKGS*PRLVNSKSICRSKT
Trigger: GGTTTTGCTACGACAAATGCTTTTGGAATTGACAAGACGTGGTCAAGAACCTTTGAGCGCACTGCTGCAGTTTGGCGTGACATACCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498133.5
3UTR GCA 90 bp TTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTTCAGTTGTTaGTGCTTTCACCTCTTCTTCATCAAGTTCTACAAACAGAGATGT +
Preference number: 1 (lower is better)
Translates to: FQCGDHLLHFSRFSC*CFHLFFIKFYKQRC
Trigger: ACATCTCTGTTTGTAGAACTTGATGAAGAAGAGGTGAAAGCAGCAACAACTGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR CCA 90 bp TGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTaGAGCTGCAGGAAGCTTCGGGGACTTGACAGACTGAGTCCAGAG +
Preference number: 1 (lower is better)
Translates to: CVHISKIPKGSIFTR*SCRKLRGLDRLSPE
Trigger: CTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTCCTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR CCA 90 bp GAAATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATaGGTGAACCAGAAGGTCAACAGTTGCATTTCTTCATCTAGAATG +
Preference number: 1 (lower is better)
Translates to: EMQVRRGIKNASRGR*VNQKVNSCISSSRM
Trigger: CATTCTAGATGAAGAAATGCAACTGTTGACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR GCA 90 bp GAAGTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTaGTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATC +
Preference number: 1 (lower is better)
Translates to: EVPNYPRVFHKCPDS*WRFKFQPIQLQPYI
Trigger: GATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR CCA 90 bp GTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTaGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTT +
Preference number: 1 (lower is better)
Translates to: VPNYPRVFHKCPDSC*RFKFQPIQLQPYIL
Trigger: AAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR GCA 90 bp ATGTCCACATCTCATACCTTTCAGGAGAAAGGCAAGGAGACTACTTaGCTTACTGTCATATTATTGAGGGAATCAGCGCAAAGCCTGAGG +
Preference number: 1 (lower is better)
Translates to: MSTSHTFQEKGKETT*LTVILLRESAQSLR
Trigger: CCTCAGGCTTTGCGCTGATTCCCTCAATAATATGACAGTAAGGCAAGTAGTCTCCTTGCCTTTCTCCTGAAAGGTATGAGATGTGGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR TCA 90 bp ATGATGATCATGAGAGTCCCCTTAAGGCACACCGCAGGTACTGACTaGTTTCTGTGGGCCCAGAATTATCACTTTAATACAGAGAGGATA +
Preference number: 1 (lower is better)
Translates to: MMIMRVPLRHTAGTD*FLWAQNYHFNTERI
Trigger: TATCCTCTCTGTATTAAAGTGATAATTCTGGGCCCACAGAAATCAGTCAGTACCTGCGGTGTGCCTTAAGGGGACTCTCATGATCATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR TCA 90 bp TGCACCAGAGAAGAGGAAACATTATTCTGGTATCCAGTATGTCGCTaGGATGTTAAACGAGATAATGCTTGTGTGGGAATTTGGGCAGAA +
Preference number: 1 (lower is better)
Translates to: CTREEETLFWYPVCR*DVKRDNACVGIWAE
Trigger: TTCTGCCCAAATTCCCACACAAGCATTATCTCGTTTAACATCTCAGCGACATACTGGATACCAGAATAATGTTTCCTCTTCTCTGGTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR CCA 90 bp AGCCAATGGAAAACACTATCTAGTTCCATTACCGTGAAATACAACTaGCCAAATCACTGTGGAGGAATGTCTAACAGGTGGGAAAATAAA +
Preference number: 1 (lower is better)
Translates to: SQWKTLSSSITVKYN*PNHCGGMSNRWENK
Trigger: TTTATTTTCCCACCTGTTAGACATTCCTCCACAGTGATTTGGCCAGTTGTATTTCACGGTAATGGAACTAGATAGTGTTTTCCATTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR TCA 90 bp CAGCCAGAGGAAAGAAAATTATGCCGATGCTCAACTAGCATATACTaGTTAGGACTATTTTGGTTTATTACCCTGGCATTGAAGAATTCA +
Preference number: 1 (lower is better)
Translates to: QPEERKLCRCSTSIY*LGLFWFITLALKNS
Trigger: TGAATTCTTCAATGCCAGGGTAATAAACCAAAATAGTCCTAATCAGTATATGCTAGTTGAGCATCGGCATAATTTTCTTTCCTCTGGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR CAA 90 bp GACAGCGGCATGGGCTTCATCTCACCGGCGGGGGACAGTCTAGACTaGCCCTCAGACGGCGGCACGGGCTTCTTCTCGCTGGCAGGGGAC +
Preference number: 2 (lower is better)
Translates to: DSGMGFISPAGDSLD*PSDGGTGFFSLAGD
Trigger: GTCCCCTGCCAGCGAGAAGAAGCCCGTGCCGCCGTCTGAGGGCAAGTCTAGACTGTCCCCCGCCGGTGAGATGAAGCCCATGCCGCTGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp GGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGGACAGCCCCAACCCTCAGACAGCGGCATaGGCTTCATCTCACCGGCGG +
Preference number: 2 (lower is better)
Translates to: GCHWHLVGGAHHTQDSPNPQTAA*ASSHRR
Trigger: CCGCCGGTGAGATGAAGCCCATGCCGCTGTCTGAGG...GTTGGGGCTGTCCTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp GGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGGACAGCCCCAACCGGGCTTCTTCTCGCTaGCAGGGGACAGCTCTTCCA +
Preference number: 2 (lower is better)
Translates to: GCHWHLVGGAHHTQDSPNRASSR*QGTALP
Trigger: TGGAAGAGCTGTCCCCTGCCAGCGAGAAGAAGCCCG...GTTGGGGCTGTCCTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR CAA 90 bp GCCAGGATGGCAACAGCAGCAGCCCCTCCAAACAGCAGTATAGACTaGCCCTCAGACAGCGGCATGGGCTTCATCTCACCGGCGGGGGAC +
Preference number: 2 (lower is better)
Translates to: ARMATAAAPPNSSID*PSDSGMGFISPAGD
Trigger: GTCCCCCGCCGGTGAGATGAAGCCCATGCCGCTGTCTGAGGGCAAGTCTATACTGCTGTTTGGAGGGGCTGCTGCTGTTGCCATCCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR TCA 90 bp GCCCTCAGACAGCGGCATGGGCTTCATCTCACCGGCGGGGGACAGTCTAGACTTGCAGGGAGGTGGCAGTaGTATGTGGAAGCAAGGGAG +
Preference number: 2 (lower is better)
Translates to: ALRQRHGLHLTGGGQSRLAGRWQ*YVEARE
Trigger: CTCCCTTGCTTCCACATATCACTGCCACCTCCCTGC...AAGTCTAGACTGTCCCCCGCCGGTGAGATGAAGCCCATGCCGCTGTCTGAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp CTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCTTATGGGGCTTCAGGAAGTaGCTCTTGCAGCTCCCGCGC +
Preference number: 2 (lower is better)
Translates to: LRGLDRLSPEQALARGILWGFRK*LLQLPR
Trigger: GCGCGGGAGCTGCAAGAGGCACTTCCTGAAGCCCCA...TAAGATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp GGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGGACAGCCCCAACCGGTCCTGGAGGGGGTaGTTTACCCCTAAGATTCTC +
Preference number: 2 (lower is better)
Translates to: GCHWHLVGGAHHTQDSPNRSWRG*FTPKIL
Trigger: GAGAATCTTAGGGGTAAAGCACCCCCTCCAGGACCG...GTTGGGGCTGTCCTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp GGAGCTGCAGTAGGAAGCAGTCCTCATGAGGGCTGTTCCCTTCCACTGCTGGAGGCAGGAACCTGGGGGTaGAGAGGAACAGTGCAGTCC +
Preference number: 2 (lower is better)
Translates to: GAAVGSSPHEGCSLPLLEAGTWG*RGTVQS
Trigger: GGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGC...CTCCAGCAGTGGAAGGGAACAGCCCTCATGAGGACTGCTTCCTACTGCAGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CCA 90 bp CACTCAGCAGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGGGTGGCAGTGATATGTaGAAGCAAGGGAGCTGGGGC +
Preference number: 2 (lower is better)
Translates to: HSAAFLWVPVRGPPPPLQGGSDM*KQGSWG
Trigger: GCCCCAGCTCCCTTGCTTCCACATATCACTGCCACC...CTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp CGCCCGTGGGATCTTAGCAGGAACCTGGGGGTGAAGAGGAACAGTGCAGTCCCTTCAGCAGCGTTTCTGTaGGTTCCAGTGCGGGGACCA +
Preference number: 2 (lower is better)
Translates to: RPWDLSRNLGVKRNSAVPSAAFL*VPVRGP
Trigger: TGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGA...AGGGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGCTAAGATCCCACGGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp CAGCAGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTCAGCAGCGTTTCTGTaGGTTCCAGTGCGGGGACCA +
Preference number: 2 (lower is better)
Translates to: QQRFCGFQCGDHLLHFSRSAAFL*VPVRGP
Trigger: TGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGA...CCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR TCA 90 bp AGGTGGAGCTGCAGGAAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCGAGACTCTGGGGGACTaGCTTGTCCAGAGTTGTCGC +
Preference number: 2 (lower is better)
Translates to: RWSCRKLRGLDRLSPEQAETLGD*LVQSCR
Trigger: GCGACAACTCTGGACAAGTCAGTCCCCCAGAGTCTC...GGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTCCTGCAGCTCCACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp CTCCTTCTCACTCAGCAGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCGGATCCATTGCAATCTaGTGCCAGGACTCAGGGCCT +
Preference number: 2 (lower is better)
Translates to: LLLTQQRFCGFQCGDHLLGSIAI*CQDSGP
Trigger: AGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCC...GAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGAGTGAGAAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp TCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTTCAGTTGTTTGGGGCTTCAGGAAGTaGCTCTTGCAGCTCCCGCGC +
Preference number: 2 (lower is better)
Translates to: SVGSSAGTTSSTSVGSVVWGFRK*LLQLPR
Trigger: GCGCGGGAGCTGCAAGAGGCACTTCCTGAAGCCCCA...AACAACTGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp GGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGGACAGCCCCAACCCTCAAGCCCTAACATaGCTAACATGCCACTGCCAT +
Preference number: 2 (lower is better)
Translates to: GCHWHLVGGAHHTQDSPNPQALT*LTCHCH
Trigger: ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGG...GTTGGGGCTGTCCTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGGCCAAACTGCAGCAGTaGGCTCAAAGGTTCTTGACC +
Preference number: 2 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQAKLQQ*AQRFLT
Trigger: GGTCAAGAACCTTTGAGCGCACTGCTGCAGTTTGGC...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399777.1
ENST00000498133.5
3UTR-3UTR GCA 90 bp GGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGGACAGCCCCAACTATGTCACGCCAAACTaGAGCAGTGCGCTCAAAGGT +
Preference number: 2 (lower is better)
Translates to: GCHWHLVGGAHHTQDSPNYVTPN*SSALKG
Trigger: ACCTTTGAGCGCACTGCTGCAGTTTGGCGTGACATA...GTTGGGGCTGTCCTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399777.1
ENST00000498133.5
3UTR-3UTR CCA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGCACAGTTGGAGACTCTaGGGGACTGACTTGTCCAGA +
Preference number: 2 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQHSWRL*GTDLSR
Trigger: TCTGGACAAGTCAGTCCCCCAGAGTCTCCAACTGTG...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp CTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCTTAGGTGGCAGTGATATGTaGAAGCAAGGGAGCTGGGGC +
Preference number: 2 (lower is better)
Translates to: LRGLDRLSPEQALARGILGGSDM*KQGSWG
Trigger: GCCCCAGCTCCCTTGCTTCCACATATCACTGCCACC...TAAGATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp AAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCAGTTGCACTCACAAGTaGGGACCCCAGGTCTCCTTC +
Preference number: 2 (lower is better)
Translates to: KLRGLDRLSPEQALARGISCTHK*GPQVSF
Trigger: GAAGGAGACCTGGGGTCCCCACTTGTGAGTGCAACT...GATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp GGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTTCAGTTGTTGCTGCTGCAGGGAGGTGGCAGTaGTATGTGGAAGCAAGGGAG +
Preference number: 2 (lower is better)
Translates to: GSSAGTTSSTSVGSVVAAAGRWQ*YVEARE
Trigger: CTCCCTTGCTTCCACATATCACTGCCACCTCCCTGC...AGCAGCAACAACTGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR TCA 90 bp AGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTTCAGCAGGGAGGTGGCAGTaGTATGTGGAAGCAAGGGAG +
Preference number: 2 (lower is better)
Translates to: SVSVGSSAGTTSSTSVGSAGRWQ*YVEARE
Trigger: CTCCCTTGCTTCCACATATCACTGCCACCTCCCTGC...TGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp CAGCAGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTCCATTGCAATCTGCTaGCAGGACTCAGGGCCTAGT +
Preference number: 2 (lower is better)
Translates to: QQRFCGFQCGDHLLHFSRSIAIC*QDSGPS
Trigger: ACTAGGCCCTGAGTCCTGGCAGCAGATTGCAATGGA...CCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp AGAACAGCACTAGTGCCAAGGCTGAGAAACCCGGTCCTGGAGGGGGTGCTTTACCAGCAGCCTCTTCCATaGCCTCGGGCACCTCTTCTT +
Preference number: 2 (lower is better)
Translates to: RTALVPRLRNPVLEGVLYQQPLP*PRAPLL
Trigger: AAGAAGAGGTGCCCGAGGGCATGGAAGAGGCTGCTG...GTAAAGCACCCCCTCCAGGACCGGGTTTCTCAGCCTTGGCACTAGTGCTGTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp GGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGGACAGCCCCAACCTAACATGCCTAACATaGCACTGCCATGTTGAGCAG +
Preference number: 2 (lower is better)
Translates to: GCHWHLVGGAHHTQDSPNLTCLT*HCHVEQ
Trigger: CTGCTCAACATGGCAGTGGCATGTTAGGCATGTTAG...GTTGGGGCTGTCCTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CCA 90 bp AGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTTCATCAGCAGCGTTTCTGTaGGTTCCAGTGCGGGGACCA +
Preference number: 2 (lower is better)
Translates to: SVSVGSSAGTTSSTSVGSSAAFL*VPVRGP
Trigger: TGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGA...TGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp GGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTTCAGTTGTTGCTGCTTCAGCAGCGTTTCTGTaGGTTCCAGTGCGGGGACCA +
Preference number: 2 (lower is better)
Translates to: GSSAGTTSSTSVGSVVAASAAFL*VPVRGP
Trigger: TGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGA...AGCAGCAACAACTGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp GTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATGTTGAGCCTCAGACAGCGGCATaGGCTTCATCTCACCGGCGG +
Preference number: 2 (lower is better)
Translates to: VNAPPQALTCLTCHCHVEPQTAA*ASSHRR
Trigger: CCGCCGGTGAGATGAAGCCCATGCCGCTGTCTGAGG...CTCAACATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR TCA 90 bp AATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGCAGGAACCTGGGGGTaGAGAGGAACAGTGCAGTCC +
Preference number: 2 (lower is better)
Translates to: NAGEKGYQECLEGEMGEPAGTWG*RGTVQS
Trigger: GGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGC...TGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp GCCCTCAGACAGCGGCATGGGCTTCATCTCACCGGCGGGGGACAGTCTAGACTTTTCTTCAGGATCCATTaGAATCTGCTGCCAGGACTC +
Preference number: 2 (lower is better)
Translates to: ALRQRHGLHLTGGGQSRLFFRIH*NLLPGL
Trigger: GAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAA...AAGTCTAGACTGTCCCCCGCCGGTGAGATGAAGCCCATGCCGCTGTCTGAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp CAGGATGGCAACAGCAGCAGCCCCTCCAAACAGCAGTATAGACTTGCCCTCAGACAGCAGCCTCTTCCATaGCCTCGGGCACCTCTTCTT +
Preference number: 2 (lower is better)
Translates to: QDGNSSSPSKQQYRLALRQQPLP*PRAPLL
Trigger: AAGAAGAGGTGCCCGAGGGCATGGAAGAGGCTGCTG...TCTGAGGGCAAGTCTATACTGCTGTTTGGAGGGGCTGCTGCTGTTGCCATCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp CTCAGAGATGAACCTGGCTTCGATTGGTGCTTGAATGCGCTCAGCCAATGGGTGTCAGGAAGTGCCTCTTaGAGCTCCCGCGCTGGCAAG +
Preference number: 2 (lower is better)
Translates to: LRDEPGFDWCLNALSQWVSGSAS*SSRAGK
Trigger: CTTGCCAGCGCGGGAGCTGCAAGAGGCACTTCCTGA...CACCCATTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGGTTCATCTCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp CAGGGATGCTGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGATTCTGTGGGTTCCAGTaGGGGGACCACCTCCTCCAC +
Preference number: 2 (lower is better)
Translates to: QGCCHILLTQELTKSYQRFCGFQ*GDHLLH
Trigger: GTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAA...TCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCAGCATCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp CTCAGAGATGAACCTGGCTTCGATTGGTGCTTGAATGCGCTCAGCCAATGGGTGTACCCCGATGGCCACTaGCAGGATGGCAACAGCAGC +
Preference number: 2 (lower is better)
Translates to: LRDEPGFDWCLNALSQWVYPDGH*QDGNSS
Trigger: GCTGCTGTTGCCATCCTGGCAGTGGCCATCGGGGTA...CACCCATTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGGTTCATCTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp ACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGATACCCCGATGGCCACTaGCAGGATGGCAACAGCAGC +
Preference number: 2 (lower is better)
Translates to: TFSFVISGRGCHWHLVGGYPDGH*QDGNSS
Trigger: GCTGCTGTTGCCATCCTGGCAGTGGCCATCGGGGTA...TCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp GGAGCTGCAGTAGGAAGCAGTCCTCATGAGGGCTGTTCCCTTCCACTGCTGGAGCCTGGCTTCGATTGGTaGTTGAATGCGCTCAGCCAA +
Preference number: 2 (lower is better)
Translates to: GAAVGSSPHEGCSLPLLEPGFDW*LNALSQ
Trigger: TTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGG...CTCCAGCAGTGGAAGGGAACAGCCCTCATGAGGACTGCTTCCTACTGCAGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CCA 90 bp AGGTGGAGCTGCAGGAAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCAGACTGCCAGGAAGTaGTCACAGTTGGAGACTCTG +
Preference number: 2 (lower is better)
Translates to: RWSCRKLRGLDRLSPEQAQTARK*SQLETL
Trigger: CAGAGTCTCCAACTGTGACCACTTCCTGGCAGTCTG...GGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTCCTGCAGCTCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp AACAGCACTAGTGCCAAGGCTGAGAAACCCGGTCCTGGAGGGGGTGCTTTACCCCAGACTGCCAGGAAGTaGTCACAGTTGGAGACTCTG +
Preference number: 2 (lower is better)
Translates to: NSTSAKAEKPGPGGGALPQTARK*SQLETL
Trigger: CAGAGTCTCCAACTGTGACCACTTCCTGGCAGTCTG...GGGTAAAGCACCCCCTCCAGGACCGGGTTTCTCAGCCTTGGCACTAGTGCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR TCA 90 bp GGAGGCCCTTGGGATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTGAGACTCTGGGGGACTaGCTTGTCCAGAGTTGTCGC +
Preference number: 2 (lower is better)
Translates to: GGPWDLQSDECECPTSSPETLGD*LVQSCR
Trigger: GCGACAACTCTGGACAAGTCAGTCCCCCAGAGTCTC...AGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATCCCAAGGGCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR TCA 90 bp AGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTCAACGAACAGTGCAGTCCCTaGGAGGCAGCTGAGAGTACG +
Preference number: 2 (lower is better)
Translates to: RRGIKNASRGRWVNQKVNEQCSP*EAAEST
Trigger: CGTACTCTCAGCTGCCTCTCAGGGACTGCACTGTTC...GTTGACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp CGCCCGTGGGATCTTAGCAGGAACCTGGGGGTGAAGAGGAACAGTGCAGTCCCTAGCCACCTTGCTGAATaGTGTACTCTGCCGAATAGT +
Preference number: 2 (lower is better)
Translates to: RPWDLSRNLGVKRNSAVPSHLAE*CTLPNS
Trigger: ACTATTCGGCAGAGTACATCATTCAGCAAGGTGGCT...AGGGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGCTAAGATCCCACGGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399777.1
ENST00000498133.5
3UTR-3UTR GCA 90 bp CAGGATGGCAACAGCAGCAGCCCCTCCAAACAGCAGTATAGACTTGCCCTCAGAGGATCCATTGCAATCTaGTGCCAGGACTCAGGGCCT +
Preference number: 2 (lower is better)
Translates to: QDGNSSSPSKQQYRLALRGSIAI*CQDSGP
Trigger: AGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCC...TCTGAGGGCAAGTCTATACTGCTGTTTGGAGGGGCTGCTGCTGTTGCCATCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp AATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCACAGCAGCCTCTTCCATaGCCTCGGGCACCTCTTCTT +
Preference number: 2 (lower is better)
Translates to: NAGEKGYQECLEGEMGEPQQPLP*PRAPLL
Trigger: AAGAAGAGGTGCCCGAGGGCATGGAAGAGGCTGCTG...TGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp AGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGGGGCTTCAGGAAGTaGCTCTTGCAGCTCCCGCGC +
Preference number: 2 (lower is better)
Translates to: SQMNVNAPPQALTCLTCHWGFRK*LLQLPR
Trigger: GCGCGGGAGCTGCAAGAGGCACTTCCTGAAGCCCCA...GTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp TCTCTTCTGAAAAGCCTCCTATTTCTTTCTCAGAGCCAGGGCTACCCCGATGGCTACCCCGATGGCCACTaGCAGGATGGCAACAGCAGC +
Preference number: 2 (lower is better)
Translates to: SLLKSLLFLSQSQGYPDGYPDGH*QDGNSS
Trigger: GCTGCTGTTGCCATCCTGGCAGTGGCCATCGGGGTA...GCCATCGGGGTAGCCCTGGCTCTGAGAAAGAAATAGGAGGCTTTTCAGAAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp GGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTCGGTCCTGGAGGGGGTaGTTTACCCCTAAGATTCTC +
Preference number: 2 (lower is better)
Translates to: GEKGYQECLEGEMGEPEGRSWRG*FTPKIL
Trigger: GAGAATCTTAGGGGTAAAGCACCCCCTCCAGGACCG...ACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CCA 90 bp AGCCTCCTATTTCTTTCTCAGAGCCAGGGCTACCCCGATGGCCACTGCCAGGATCAGACTGCCAGGAAGTaGTCACAGTTGGAGACTCTG +
Preference number: 2 (lower is better)
Translates to: SLLFLSQSQGYPDGHCQDQTARK*SQLETL
Trigger: CAGAGTCTCCAACTGTGACCACTTCCTGGCAGTCTG...ATCCTGGCAGTGGCCATCGGGGTAGCCCTGGCTCTGAGAAAGAAATAGGAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp GGAGGCCCTTGGGATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTGGTGGCAGTGATATGTaGAAGCAAGGGAGCTGGGGC +
Preference number: 2 (lower is better)
Translates to: GGPWDLQSDECECPTSSPGGSDM*KQGSWG
Trigger: GCCCCAGCTCCCTTGCTTCCACATATCACTGCCACC...AGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATCCCAAGGGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp AATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGGTGGCAGTGATATGTaGAAGCAAGGGAGCTGGGGC +
Preference number: 2 (lower is better)
Translates to: NAGEKGYQECLEGEMGEPGGSDM*KQGSWG
Trigger: GCCCCAGCTCCCTTGCTTCCACATATCACTGCCACC...TGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp AATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCATCAGCAGCGTTTCTGTaGGTTCCAGTGCGGGGACCA +
Preference number: 2 (lower is better)
Translates to: NAGEKGYQECLEGEMGEPSAAFL*VPVRGP
Trigger: TGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGA...TGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp TCTCTTCTGAAAAGCCTCCTATTTCTTTCTCAGAGCCAGGGCTACCCCGATGGCCGGGCTTCTTCTCGCTaGCAGGGGACAGCTCTTCCA +
Preference number: 2 (lower is better)
Translates to: SLLKSLLFLSQSQGYPDGRASSR*QGTALP
Trigger: TGGAAGAGCTGTCCCCTGCCAGCGAGAAGAAGCCCG...GCCATCGGGGTAGCCCTGGCTCTGAGAAAGAAATAGGAGGCTTTTCAGAAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp AGAAGTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGCCTCAGACAGCGGCATaGGCTTCATCTCACCGGCGG +
Preference number: 2 (lower is better)
Translates to: RSPQLSQSVPQMSRQLLEPQTAA*ASSHRR
Trigger: CCGCCGGTGAGATGAAGCCCATGCCGCTGTCTGAGG...CTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGACTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp CCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGGACCAGGGCTACCCCGATaGCCACTGCCAGGATGGCAA +
Preference number: 2 (lower is better)
Translates to: PHPVNSGADQELPEKANGPGLPR*PLPGWQ
Trigger: TTGCCATCCTGGCAGTGGCCATCGGGGTAGCCCTGG...TCCATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp CAGAAGTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGACCAGGGCTACCCCGATaGCCACTGCCAGGATGGCAA +
Preference number: 2 (lower is better)
Translates to: QKSPIIPECSTNVQTAAGPGLPR*PLPGWQ
Trigger: TTGCCATCCTGGCAGTGGCCATCGGGGTAGCCCTGG...TCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGACTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp ATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATCCAGGGCTACCCCGATaGCCACTGCCAGGATGGCAA +
Preference number: 2 (lower is better)
Translates to: MNVNAPPQALTCLTCHCHPGLPR*PLPGWQ
Trigger: TTGCCATCCTGGCAGTGGCCATCGGGGTAGCCCTGG...ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp AACAGCACTAGTGCCAAGGCTGAGAAACCCGGTCCTGGAGGGGGTGCTTTACCCTGTCCAGACAGCTGCTaGAGGTTCAAATTCCAGCCA +
Preference number: 2 (lower is better)
Translates to: NSTSAKAEKPGPGGGALPCPDSC*RFKFQP
Trigger: TGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACA...GGGTAAAGCACCCCCTCCAGGACCGGGTTTCTCAGCCTTGGCACTAGTGCTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp TCTCTTCTGAAAAGCCTCCTATTTCTTTCTCAGAGCCAGGGCTACCCCGATGGCGCAGGGAGGTGGCAGTaGTATGTGGAAGCAAGGGAG +
Preference number: 2 (lower is better)
Translates to: SLLKSLLFLSQSQGYPDGAGRWQ*YVEARE
Trigger: CTCCCTTGCTTCCACATATCACTGCCACCTCCCTGC...GCCATCGGGGTAGCCCTGGCTCTGAGAAAGAAATAGGAGGCTTTTCAGAAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR TCA 90 bp AACAGCACTAGTGCCAAGGCTGAGAAACCCGGTCCTGGAGGGGGTGCTTTACCCATTCTCAATTTAGCATaGGCGGAGGCCCTTGGGATT +
Preference number: 2 (lower is better)
Translates to: NSTSAKAEKPGPGGGALPILNLA*AEALGI
Trigger: AATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAAT...GGGTAAAGCACCCCCTCCAGGACCGGGTTTCTCAGCCTTGGCACTAGTGCTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp GTGGAGGAATGTCTAACAGGTGGGAAAATAAAGCAGCAAGTAGCCGCTTCCATATCCCTGAGAGGCAGCTaGGAGTACGGGCGAGCACCC +
Preference number: 2 (lower is better)
Translates to: VEECLTGGKIKQQVAASISLRGS*EYGRAP
Trigger: GGGTGCTCGCCCGTACTCTCAGCTGCCTCTCAGGGA...TATGGAAGCGGCTACTTGCTGCTTTATTTTCCCACCTGTTAGACATTCCTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp GCTCAGCCAATGGGTGTGAGGATCCAGAACTGGCAAGTGTTAATACTGGAACTCGCAGGAACCTGGGGGTaGAGAGGAACAGTGCAGTCC +
Preference number: 2 (lower is better)
Translates to: AQPMGVRIQNWQVLILELAGTWG*RGTVQS
Trigger: GGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGC...GAGTTCCAGTATTAACACTTGCCAGTTCTGGATCCTCACACCCATTGGCTGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp AATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGCTTCGGGGACTTaGCAGACTGAGTCCAGAGCA +
Preference number: 2 (lower is better)
Translates to: NAGEKGYQECLEGEMGEPEASGT*QTESRA
Trigger: TGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTC...TGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp AGGACAGCCCCAACACAGAGAATGGTCAGAACAGCACTAGTGCCAAGGCTGAGACCCCAGCCACCTTGCTaGATGATGTACTCTGCCGAA +
Preference number: 2 (lower is better)
Translates to: RTAPTQRMVRTALVPRLRPQPPC*MMYSAE
Trigger: TTCGGCAGAGTACATCATTCAGCAAGGTGGCTGGGG...TCTCAGCCTTGGCACTAGTGCTGTTCTGACCATTCTCTGTGTTGGGGCTGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399777.1
ENST00000498133.5
3UTR-3UTR GCA 90 bp AGGACAGCCCCAACACAGAGAATGGTCAGAACAGCACTAGTGCCAAGGCTGAGAGGCAGGCTTTCTGTGTaGCAACTCTGGCTAGCTGAC +
Preference number: 2 (lower is better)
Translates to: RTAPTQRMVRTALVPRLRGRLSV*QLWLAD
Trigger: GTCAGCTAGCCAGAGTTGGCACACAGAAAGCCTGCC...TCTCAGCCTTGGCACTAGTGCTGTTCTGACCATTCTCTGTGTTGGGGCTGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp GGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTTCCATTGCAATCTGCTaGCAGGACTCAGGGCCTAGT +
Preference number: 2 (lower is better)
Translates to: GEKGYQECLEGEMGEPEGSIAIC*QDSGPS
Trigger: ACTAGGCCCTGAGTCCTGGCAGCAGATTGCAATGGA...ACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp CAGCAGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTCTCTCCAGCTCCGTTaGTGTCTAAGCTTTTCACTT +
Preference number: 2 (lower is better)
Translates to: QQRFCGFQCGDHLLHFSRSLQLR*CLSFSL
Trigger: AAGTGAAAAGCTTAGACAGCAACGGAGCTGGAGAGA...CCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp TCCACAAGGCTCTCTTCCCTTGCGTTTATCTCCTTCTCACTCAGCAGCGTTTCTTCAGGAAGTGCCTCTTaGAGCTCCCGCGCTGGCAAG +
Preference number: 2 (lower is better)
Translates to: STRLSSLAFISFSLSSVSSGSAS*SSRAGK
Trigger: CTTGCCAGCGCGGGAGCTGCAAGAGGCACTTCCTGA...AGAAACGCTGCTGAGTGAGAAGGAGATAAACGCAAGGGAAGAGAGCCTTGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGAGGTTCAGTTGTTGCTaGTTTCACCTCTTCTTCATC +
Preference number: 2 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQRFSCC*FHLFFI
Trigger: GATGAAGAAGAGGTGAAAGCAGCAACAACTGAACCT...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp GCTCAGCCAATGGGTGTGAGGATCCAGAACTGGCAAGTGTTAATACTGGAACTCTTCTGTGGGTTCCAGTaGGGGGACCACCTCCTCCAC +
Preference number: 2 (lower is better)
Translates to: AQPMGVRIQNWQVLILELFCGFQ*GDHLLH
Trigger: GTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAA...GAGTTCCAGTATTAACACTTGCCAGTTCTGGATCCTCACACCCATTGGCTGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp TCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCATTCTGTGGGTTCCAGTaGGGGGACCACCTCCTCCAC +
Preference number: 2 (lower is better)
Translates to: SPIIPECSTNVQTAAGGSFCGFQ*GDHLLH
Trigger: GTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAA...TGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp AGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTACCCCGATGGCCACTaGCAGGATGGCAACAGCAGC +
Preference number: 2 (lower is better)
Translates to: SQMNVNAPPQALTCLTCHYPDGH*QDGNSS
Trigger: GCTGCTGTTGCCATCCTGGCAGTGGCCATCGGGGTA...GTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp AGCCTCCTATTTCTTTCTCAGAGCCAGGGCTACCCCGATGGCCACTGCCAGGATTGCCTAACATGCCACTaGCATGTTGAGCAGAAGTCC +
Preference number: 2 (lower is better)
Translates to: SLLFLSQSQGYPDGHCQDCLTCH*HVEQKS
Trigger: GGACTTCTGCTCAACATGGCAGTGGCATGTTAGGCA...ATCCTGGCAGTGGCCATCGGGGTAGCCCTGGCTCTGAGAAAGAAATAGGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp AATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCACGGTCCTGGAGGGGGTaGTTTACCCCTAAGATTCTC +
Preference number: 2 (lower is better)
Translates to: NAGEKGYQECLEGEMGEPRSWRG*FTPKIL
Trigger: GAGAATCTTAGGGGTAAAGCACCCCCTCCAGGACCG...TGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp GAAATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCGGTCCTGGAGGGGGTaGTTTACCCCTAAGATTCTC +
Preference number: 2 (lower is better)
Translates to: EMQVRRGIKNASRGRWVNRSWRG*FTPKIL
Trigger: GAGAATCTTAGGGGTAAAGCACCCCCTCCAGGACCG...GTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp CTCAGAGATGAACCTGGCTTCGATTGGTGCTTGAATGCGCTCAGCCAATGGGTGCGGTCCTGGAGGGGGTaGTTTACCCCTAAGATTCTC +
Preference number: 2 (lower is better)
Translates to: LRDEPGFDWCLNALSQWVRSWRG*FTPKIL
Trigger: GAGAATCTTAGGGGTAAAGCACCCCCTCCAGGACCG...CACCCATTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGGTTCATCTCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CCA 90 bp ACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGGAAGTGGTCACAGTTaGAGACTCTGGGGGACTGAC +
Preference number: 2 (lower is better)
Translates to: TFSFVISGRGCHWHLVGGGSGHS*RLWGTD
Trigger: GTCAGTCCCCCAGAGTCTCCAACTGTGACCACTTCC...TCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp TGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGTTGCAGCTCCCGCGCTaGCAAGACCACAGAAGCCAC +
Preference number: 2 (lower is better)
Translates to: CHILLTQELTKSYQRKPMLQLPR*QDHRSH
Trigger: GTGGCTTCTGTGGTCTTGCCAGCGCGGGAGCTGCAA...CATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp AAGCTTTTCACTTCTTCAGGATCCATTGCAATCTGCTGCCAGGACTCAGGGCCTTTGCAGCTCCCGCGCTaGCAAGACCACAGAAGCCAC +
Preference number: 2 (lower is better)
Translates to: KLFTSSGSIAICCQDSGPLQLPR*QDHRSH
Trigger: GTGGCTTCTGTGGTCTTGCCAGCGCGGGAGCTGCAA...AGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGTGAAAAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp ATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATTTGCAGCTCCCGCGCTaGCAAGACCACAGAAGCCAC +
Preference number: 2 (lower is better)
Translates to: MNVNAPPQALTCLTCHCHLQLPR*QDHRSH
Trigger: GTGGCTTCTGTGGTCTTGCCAGCGCGGGAGCTGCAA...ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp TCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCCCTCAGACAGCGGCATaGGCTTCATCTCACCGGCGG +
Preference number: 2 (lower is better)
Translates to: STNVQTAAGGSNSSQYNSPQTAA*ASSHRR
Trigger: CCGCCGGTGAGATGAAGCCCATGCCGCTGTCTGAGG...GGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp AGCCTCCTATTTCTTTCTCAGAGCCAGGGCTACCCCGATGGCCACTGCCAGGATTGTCCAGACAGCTGCTaGAGGTTCAAATTCCAGCCA +
Preference number: 2 (lower is better)
Translates to: SLLFLSQSQGYPDGHCQDCPDSC*RFKFQP
Trigger: TGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACA...ATCCTGGCAGTGGCCATCGGGGTAGCCCTGGCTCTGAGAAAGAAATAGGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp GGAGCTGCAGTAGGAAGCAGTCCTCATGAGGGCTGTTCCCTTCCACTGCTGGAGATGAGCGGAGGCCCTTaGGATTTACAGTCAGATGAA +
Preference number: 2 (lower is better)
Translates to: GAAVGSSPHEGCSLPLLEMSGGP*DLQSDE
Trigger: TTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCAT...CTCCAGCAGTGGAAGGGAACAGCCCTCATGAGGACTGCTTCCTACTGCAGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CCA 90 bp AGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTTCATCTTATTCCAGCCGCTaGCATGAACTGTGGTCTCCA +
Preference number: 2 (lower is better)
Translates to: SVSVGSSAGTTSSTSVGSSYSSR*HELWSP
Trigger: TGGAGACCACAGTTCATGCCAGCGGCTGGAATAAGA...TGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498133.5
3UTR CAA 90 bp CTTGGCTATTCAGGACCTGAGGCAGGATCACTTGAGCCCAGGAGTTaGAGACCGAAGCCTGCCATGATAGTGCCAGCAATTAGACACTGC +
Preference number: 2 (lower is better)
Translates to: LGYSGPEAGSLEPRS*RPKPAMIVPAIRHC
Trigger: GCAGTGTCTAATTGCTGGCACTATCATGGCAGGCTTCGGTCTCAAACTCCTGGGCTCAAGTGATCCTGCCTCAGGTCCTGAATAGCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493680.5
3UTR-3UTR TCA 90 bp TGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGGCAGGGAGGTGGCAGTaGTATGTGGAAGCAAGGGAG +
Preference number: 2 (lower is better)
Translates to: CHILLTQELTKSYQRKPMAGRWQ*YVEARE
Trigger: CTCCCTTGCTTCCACATATCACTGCCACCTCCCTGC...CATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR TCA 90 bp AGAACAGCACTAGTGCCAAGGCTGAGAAACCCGGTCCTGGAGGGGGTGCTTTACATGCCACTGCCATGTTaGGCAGAAGTCCCCAATTAT +
Preference number: 2 (lower is better)
Translates to: RTALVPRLRNPVLEGVLYMPLPC*AEVPNY
Trigger: ATAATTGGGGACTTCTGCTCAACATGGCAGTGGCAT...GTAAAGCACCCCCTCCAGGACCGGGTTTCTCAGCCTTGGCACTAGTGCTGTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp GATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACTGGGGCTTCAGGAAGTaGCTCTTGCAGCTCCCGCGC +
Preference number: 2 (lower is better)
Translates to: DLQSDECECPTSSPNMPNWGFRK*LLQLPR
Trigger: GCGCGGGAGCTGCAAGAGGCACTTCCTGAAGCCCCA...GTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp CAGCAGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGAGGTTCAGTTGTTGCTaGTTTCACCTCTTCTTCATC +
Preference number: 2 (lower is better)
Translates to: QQRFCGFQCGDHLLHFSRRFSCC*FHLFFI
Trigger: GATGAAGAAGAGGTGAAAGCAGCAACAACTGAACCT...CCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp AACAGCACTAGTGCCAAGGCTGAGAAACCCGGTCCTGGAGGGGGTGCTTTACCCAAATGTCCAGACAGCTaGTGGAGGTTCAAATTCCAG +
Preference number: 2 (lower is better)
Translates to: NSTSAKAEKPGPGGGALPKCPDS*WRFKFQ
Trigger: CTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTT...GGGTAAAGCACCCCCTCCAGGACCGGGTTTCTCAGCCTTGGCACTAGTGCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp GAAATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCCTGGCTTCGATTGGTaGTTGAATGCGCTCAGCCAA +
Preference number: 2 (lower is better)
Translates to: EMQVRRGIKNASRGRWVNPGFDW*LNALSQ
Trigger: TTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGG...GTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp ACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCAAACTGCAGCAGTaGGCTCAAAGGTTCTTGACC +
Preference number: 2 (lower is better)
Translates to: TFSFVISGRGCHWHLVGGAKLQQ*AQRFLT
Trigger: GGTCAAGAACCTTTGAGCGCACTGCTGCAGTTTGGC...TCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399777.1
ENST00000498133.5
3UTR-3UTR CCA 90 bp GCGGGGACCACCTCCTCCACTTCAGTAGGTTCAGTTGTTGCTGCTTTCACCTCTTCTGTGTGCCAACTCTaGCTAGCTGACAGTGACACA +
Preference number: 2 (lower is better)
Translates to: AGTTSSTSVGSVVAAFTSSVCQL*LADSDT
Trigger: TGTGTCACTGTCAGCTAGCCAGAGTTGGCACACAGA...AGAGGTGAAAGCAGCAACAACTGAACCTACTGAAGTGGAGGAGGTGGTCCCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp CCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGGATCAGCAGCGTTTCTGTaGGTTCCAGTGCGGGGACCA +
Preference number: 2 (lower is better)
Translates to: PHPVNSGADQELPEKANGSAAFL*VPVRGP
Trigger: TGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGA...TCCATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp AGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTCCAGGGCTACCCCGATaGCCACTGCCAGGATGGCAA +
Preference number: 2 (lower is better)
Translates to: RQLLEVQIPANTTPTLHPPGLPR*PLPGWQ
Trigger: TTGCCATCCTGGCAGTGGCCATCGGGGTAGCCCTGG...AGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp GAAATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACTGGAGGTGGAAGGAATaGCCTCCTACTATCAGCTCC +
Preference number: 2 (lower is better)
Translates to: EMQVRRGIKNASRGRWVNWRWKE*PPTISS
Trigger: GGAGCTGATAGTAGGAGGCCATTCCTTCCACCTCCA...GTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR CAA 90 bp AGACTGCCAGGAAGTGGTCACAGTTGGAGACTCTGGGGGACTGACTaGTCCAGAGTTGTCGCTGGGCAGGATGTAAATGTCATTGCTATC +
Preference number: 2 (lower is better)
Translates to: RLPGSGHSWRLWGTD*SRVVAGQDVNVIAI
Trigger: GATAGCAATGACATTTACATCCTGCCCAGCGACAACTCTGGACAAGTCAGTCCCCCAGAGTCTCCAACTGTGACCACTTCCTGGCAGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR CAA 90 bp TCCTGCCTTGACACAAGACACATGTGTCTCTCTAGCCAGAGTTACTaGCAGTTGCACTCACAAGTGGGGACCCCAGGTCTCCTTCATGTG +
Preference number: 2 (lower is better)
Translates to: SCLDTRHMCLSSQSY*QLHSQVGTPGLLHV
Trigger: CACATGAAGGAGACCTGGGGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAGAGAGACACATGTGTCTTGTGTCAAGGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp CTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCTTATGGATTTCTCAACTGTaGTCACTTCTGTGTCAGGTT +
Preference number: 2 (lower is better)
Translates to: LRGLDRLSPEQALARGILWISQL*SLLCQV
Trigger: AACCTGACACAGAAGTGATCACAGTTGAGAAATCCA...TAAGATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR TCA 90 bp GGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTATGCCACTGCCATGTTaGGCAGAAGTCCCCAATTAT +
Preference number: 2 (lower is better)
Translates to: GEKGYQECLEGEMGEPEGMPLPC*AEVPNY
Trigger: ATAATTGGGGACTTCTGCTCAACATGGCAGTGGCAT...ACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp CTAAGCTTTTCACTTCTTCAGGATCCATTGCAATCTGCTGCCAGGACTCAGGGCCCCCAGCCACCTTGCTaGATGATGTACTCTGCCGAA +
Preference number: 2 (lower is better)
Translates to: LSFSLLQDPLQSAARTQGPQPPC*MMYSAE
Trigger: TTCGGCAGAGTACATCATTCAGCAAGGTGGCTGGGG...GCCCTGAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGTGAAAAGCTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399777.1
ENST00000498133.5
3UTR-3UTR GCA 90 bp ACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGGTAAGCTCTCAGACTaGCAGGAAGTGGTCACAGTT +
Preference number: 2 (lower is better)
Translates to: TFSFVISGRGCHWHLVGGGKLSD*QEVVTV
Trigger: AACTGTGACCACTTCCTGGCAGTCTGAGAGCTTACC...TCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp CTAAGCTTTTCACTTCTTCAGGATCCATTGCAATCTGCTGCCAGGACTCAGGGCGGCAGGCTTTCTGTGTaGCAACTCTGGCTAGCTGAC +
Preference number: 2 (lower is better)
Translates to: LSFSLLQDPLQSAARTQGGRLSV*QLWLAD
Trigger: GTCAGCTAGCCAGAGTTGGCACACAGAAAGCCTGCC...GCCCTGAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGTGAAAAGCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp TCCACAAGGCTCTCTTCCCTTGCGTTTATCTCCTTCTCACTCAGCAGCGTTTCTGGCAGGCTTTCTGTGTaGCAACTCTGGCTAGCTGAC +
Preference number: 2 (lower is better)
Translates to: STRLSSLAFISFSLSSVSGRLSV*QLWLAD
Trigger: GTCAGCTAGCCAGAGTTGGCACACAGAAAGCCTGCC...AGAAACGCTGCTGAGTGAGAAGGAGATAAACGCAAGGGAAGAGAGCCTTGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp TCCACAAGGCTCTCTTCCCTTGCGTTTATCTCCTTCTCACTCAGCAGCGTTTCTGGATCCATTGCAATCTaGTGCCAGGACTCAGGGCCT +
Preference number: 2 (lower is better)
Translates to: STRLSSLAFISFSLSSVSGSIAI*CQDSGP
Trigger: AGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCC...AGAAACGCTGCTGAGTGAGAAGGAGATAAACGCAAGGGAAGAGAGCCTTGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp GCTCAGCCAATGGGTGTGAGGATCCAGAACTGGCAAGTGTTAATACTGGAACTCGGATCCATTGCAATCTaGTGCCAGGACTCAGGGCCT +
Preference number: 2 (lower is better)
Translates to: AQPMGVRIQNWQVLILELGSIAI*CQDSGP
Trigger: AGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCC...GAGTTCCAGTATTAACACTTGCCAGTTCTGGATCCTCACACCCATTGGCTGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp GCGGGGACCACCTCCTCCACTTCAGTAGGTTCAGTTGTTGCTGCTTTCACCTCTTTCTTCAGGATCCATTaGAATCTGCTGCCAGGACTC +
Preference number: 2 (lower is better)
Translates to: AGTTSSTSVGSVVAAFTSFFRIH*NLLPGL
Trigger: GAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAA...AGAGGTGAAAGCAGCAACAACTGAACCTACTGAAGTGGAGGAGGTGGTCCCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp ACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGATGCCTAACATGCCACTaGCATGTTGAGCAGAAGTCC +
Preference number: 2 (lower is better)
Translates to: TFSFVISGRGCHWHLVGGCLTCH*HVEQKS
Trigger: GGACTTCTGCTCAACATGGCAGTGGCATGTTAGGCA...TCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp AGGACAGCCCCAACACAGAGAATGGTCAGAACAGCACTAGTGCCAAGGCTGAGATGCCTAACATGCCACTaGCATGTTGAGCAGAAGTCC +
Preference number: 2 (lower is better)
Translates to: RTAPTQRMVRTALVPRLRCLTCH*HVEQKS
Trigger: GGACTTCTGCTCAACATGGCAGTGGCATGTTAGGCA...TCTCAGCCTTGGCACTAGTGCTGTTCTGACCATTCTCTGTGTTGGGGCTGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp AGGACAGCCCCAACACAGAGAATGGTCAGAACAGCACTAGTGCCAAGGCTGAGACCTCAAGCCCTAACATaGCTAACATGCCACTGCCAT +
Preference number: 2 (lower is better)
Translates to: RTAPTQRMVRTALVPRLRPQALT*LTCHCH
Trigger: ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGG...TCTCAGCCTTGGCACTAGTGCTGTTCTGACCATTCTCTGTGTTGGGGCTGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp GTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATGTTGAGCCTCAAGCCCTAACATaGCTAACATGCCACTGCCAT +
Preference number: 2 (lower is better)
Translates to: VNAPPQALTCLTCHCHVEPQALT*LTCHCH
Trigger: ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGG...CTCAACATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp ACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGACCTCAAGCCCTAACATaGCTAACATGCCACTGCCAT +
Preference number: 2 (lower is better)
Translates to: TFSFVISGRGCHWHLVGGPQALT*LTCHCH
Trigger: ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGG...TCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CCA 90 bp CAGGATGGCAACAGCAGCAGCCCCTCCAAACAGCAGTATAGACTTGCCCTCAGAGTCCAGAGTTGTCGCTaGGCAGGATGTAAATGTCAT +
Preference number: 2 (lower is better)
Translates to: QDGNSSSPSKQQYRLALRVQSCR*AGCKCH
Trigger: ATGACATTTACATCCTGCCCAGCGACAACTCTGGAC...TCTGAGGGCAAGTCTATACTGCTGTTTGGAGGGGCTGCTGCTGTTGCCATCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp CTAAGCTTTTCACTTCTTCAGGATCCATTGCAATCTGCTGCCAGGACTCAGGGCGGAAGTGGTCACAGTTaGAGACTCTGGGGGACTGAC +
Preference number: 2 (lower is better)
Translates to: LSFSLLQDPLQSAARTQGGSGHS*RLWGTD
Trigger: GTCAGTCCCCCAGAGTCTCCAACTGTGACCACTTCC...GCCCTGAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGTGAAAAGCTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp TCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGGGAAGTGGTCACAGTTaGAGACTCTGGGGGACTGAC +
Preference number: 2 (lower is better)
Translates to: SDECECPTSSPNMPNMPLGSGHS*RLWGTD
Trigger: GTCAGTCCCCCAGAGTCTCCAACTGTGACCACTTCC...CAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp ATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATGGAAGTGGTCACAGTTaGAGACTCTGGGGGACTGAC +
Preference number: 2 (lower is better)
Translates to: MNVNAPPQALTCLTCHCHGSGHS*RLWGTD
Trigger: GTCAGTCCCCCAGAGTCTCCAACTGTGACCACTTCC...ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp ACTTCTTCAGGATCCATTGCAATCTGCTGCCAGGACTCAGGGCCTAGTGACACTCAGACTGCCAGGAAGTaGTCACAGTTGGAGACTCTG +
Preference number: 2 (lower is better)
Translates to: TSSGSIAICCQDSGPSDTQTARK*SQLETL
Trigger: CAGAGTCTCCAACTGTGACCACTTCCTGGCAGTCTG...AGTGTCACTAGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp TCTCTTCTGAAAAGCCTCCTATTTCTTTCTCAGAGCCAGGGCTACCCCGATGGCCAGACTGCCAGGAAGTaGTCACAGTTGGAGACTCTG +
Preference number: 2 (lower is better)
Translates to: SLLKSLLFLSQSQGYPDGQTARK*SQLETL
Trigger: CAGAGTCTCCAACTGTGACCACTTCCTGGCAGTCTG...GCCATCGGGGTAGCCCTGGCTCTGAGAAAGAAATAGGAGGCTTTTCAGAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp ACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGATCTGTGTGCCAACTCTaGCTAGCTGACAGTGACACA +
Preference number: 2 (lower is better)
Translates to: TFSFVISGRGCHWHLVGGSVCQL*LADSDT
Trigger: TGTGTCACTGTCAGCTAGCCAGAGTTGGCACACAGA...TCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp CTCAGAGATGAACCTGGCTTCGATTGGTGCTTGAATGCGCTCAGCCAATGGGTGTCTGTGTGCCAACTCTaGCTAGCTGACAGTGACACA +
Preference number: 2 (lower is better)
Translates to: LRDEPGFDWCLNALSQWVSVCQL*LADSDT
Trigger: TGTGTCACTGTCAGCTAGCCAGAGTTGGCACACAGA...CACCCATTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGGTTCATCTCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp AAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTCGGGCTTCTTCTCGCTaGCAGGGGACAGCTCTTCCA +
Preference number: 2 (lower is better)
Translates to: KCPDSCWRFKFQPIQLQPRASSR*QGTALP
Trigger: TGGAAGAGCTGTCCCCTGCCAGCGAGAAGAAGCCCG...AGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp GATTCTCAATTTAGCATGAGCGGAGGCCCTTGGGATTTACAGTCAGATGAATGTCCAGGGCTACCCCGATaGCCACTGCCAGGATGGCAA +
Preference number: 2 (lower is better)
Translates to: DSQFSMSGGPWDLQSDECPGLPR*PLPGWQ
Trigger: TTGCCATCCTGGCAGTGGCCATCGGGGTAGCCCTGG...ACATTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp GTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATGTTGAGTGTCCAGACAGCTGCTaGAGGTTCAAATTCCAGCCA +
Preference number: 2 (lower is better)
Translates to: VNAPPQALTCLTCHCHVECPDSC*RFKFQP
Trigger: TGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACA...CTCAACATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CCA 90 bp GCTCAGCCAATGGGTGTGAGGATCCAGAACTGGCAAGTGTTAATACTGGAACTCAGTTGCACTCACAAGTaGGGACCCCAGGTCTCCTTC +
Preference number: 2 (lower is better)
Translates to: AQPMGVRIQNWQVLILELSCTHK*GPQVSF
Trigger: GAAGGAGACCTGGGGTCCCCACTTGTGAGTGCAACT...GAGTTCCAGTATTAACACTTGCCAGTTCTGGATCCTCACACCCATTGGCTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp GTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATGTTGAGTGCTATCTTCTGCAGTaGTTCCAGGGTATTCCTCCT +
Preference number: 2 (lower is better)
Translates to: VNAPPQALTCLTCHCHVECYLLQ*FQGIPP
Trigger: AGGAGGAATACCCTGGAATCACTGCAGAAGATAGCA...CTCAACATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR TCA 90 bp GAAATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACTGCTATCTTCTGCAGTaGTTCCAGGGTATTCCTCCT +
Preference number: 2 (lower is better)
Translates to: EMQVRRGIKNASRGRWVNCYLLQ*FQGIPP
Trigger: AGGAGGAATACCCTGGAATCACTGCAGAAGATAGCA...GTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337612.9
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR TCA 90 bp AGGACAGCCCCAACACAGAGAATGGTCAGAACAGCACTAGTGCCAAGGCTGAGAATGCCACTGCCATGTTaGGCAGAAGTCCCCAATTAT +
Preference number: 2 (lower is better)
Translates to: RTAPTQRMVRTALVPRLRMPLPC*AEVPNY
Trigger: ATAATTGGGGACTTCTGCTCAACATGGCAGTGGCAT...TCTCAGCCTTGGCACTAGTGCTGTTCTGACCATTCTCTGTGTTGGGGCTGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp GAAATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACATTCTCAATTTAGCATaGGCGGAGGCCCTTGGGATT +
Preference number: 2 (lower is better)
Translates to: EMQVRRGIKNASRGRWVNILNLA*AEALGI
Trigger: AATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAAT...GTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp AGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCATCCCTGAGAGGCAGCTaGGAGTACGGGCGAGCACCC +
Preference number: 2 (lower is better)
Translates to: SLLIEKDEILRGLRAKKSSLRGS*EYGRAP
Trigger: GGGTGCTCGCCCGTACTCTCAGCTGCCTCTCAGGGA...TGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp GTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGCAGGGCAGGAACCTGGGGGTaGAGAGGAACAGTGCAGTCC +
Preference number: 2 (lower is better)
Translates to: VHISKIPKGSIFTRWSCRAGTWG*RGTVQS
Trigger: GGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGC...CCTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp GTGTCTGTTAGCAATCAGATAGCCTACAAGGCCGTCTTGATGGGTATGATCACCGCTTCGATTGGTGCTTaGATGCGCTCAGCCAATGGG +
Preference number: 2 (lower is better)
Translates to: VSVSNQIAYKAVLMGMITASIGA*MRSANG
Trigger: CCCATTGGCTGAGCGCATTCAAGCACCAATCGAAGC...GGTGATCATACCCATCAAGACGGCCTTGTAGGCTATCTGATTGCTAACAGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp CTTTCTGTGTGCCAACTCTGGCTAGCTGACAGTGACACAGGTAAGCTCTCAGACGGTAAGCTCTCAGACTaGCAGGAAGTGGTCACAGTT +
Preference number: 2 (lower is better)
Translates to: LSVCQLWLADSDTGKLSDGKLSD*QEVVTV
Trigger: AACTGTGACCACTTCCTGGCAGTCTGAGAGCTTACC...GTCTGAGAGCTTACCTGTGTCACTGTCAGCTAGCCAGAGTTGGCACACAGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp TCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCGGATCCATTGCAATCTaGTGCCAGGACTCAGGGCCT +
Preference number: 2 (lower is better)
Translates to: STNVQTAAGGSNSSQYNSGSIAI*CQDSGP
Trigger: AGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCC...GGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp GATTCTCAATTTAGCATGAGCGGAGGCCCTTGGGATTTACAGTCAGATGAATGTTCAGGAAGTGCCTCTTaGAGCTCCCGCGCTGGCAAG +
Preference number: 2 (lower is better)
Translates to: DSQFSMSGGPWDLQSDECSGSAS*SSRAGK
Trigger: CTTGCCAGCGCGGGAGCTGCAAGAGGCACTTCCTGA...ACATTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp CTAACAGGTGGGAAAATAAAGCAGCAAGTAGCCGCTTCCATACCACATTTCTTCTCAGGAAGTGCCTCTTaGAGCTCCCGCGCTGGCAAG +
Preference number: 2 (lower is better)
Translates to: LTGGKIKQQVAASIPHFFSGSAS*SSRAGK
Trigger: CTTGCCAGCGCGGGAGCTGCAAGAGGCACTTCCTGA...GAAGAAATGTGGTATGGAAGCGGCTACTTGCTGCTTTATTTTCCCACCTGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp GGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTTCAGTTGTTGCTGCTAGGTTCAGTTGTTGCTaGTTTCACCTCTTCTTCATC +
Preference number: 2 (lower is better)
Translates to: GSSAGTTSSTSVGSVVAARFSCC*FHLFFI
Trigger: GATGAAGAAGAGGTGAAAGCAGCAACAACTGAACCT...AGCAGCAACAACTGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp GCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTTACCCCGATGGCCACTaGCAGGATGGCAACAGCAGC +
Preference number: 2 (lower is better)
Translates to: AGGSNSSQYNSNLTSFCLYPDGH*QDGNSS
Trigger: GCTGCTGTTGCCATCCTGGCAGTGGCCATCGGGGTA...AAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp CTCAGAGATGAACCTGGCTTCGATTGGTGCTTGAATGCGCTCAGCCAATGGGTGCTAACATGCCTAACATaGCACTGCCATGTTGAGCAG +
Preference number: 2 (lower is better)
Translates to: LRDEPGFDWCLNALSQWVLTCLT*HCHVEQ
Trigger: CTGCTCAACATGGCAGTGGCATGTTAGGCATGTTAG...CACCCATTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGGTTCATCTCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp AGGACAGCCCCAACACAGAGAATGGTCAGAACAGCACTAGTGCCAAGGCTGAGATCAGATGAATGTGAATaGCCCACCTCAAGCCCTAAC +
Preference number: 2 (lower is better)
Translates to: RTAPTQRMVRTALVPRLRSDECE*PTSSPN
Trigger: GTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGA...TCTCAGCCTTGGCACTAGTGCTGTTCTGACCATTCTCTGTGTTGGGGCTGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp GTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATGTTGAGTCAGATGAATGTGAATaGCCCACCTCAAGCCCTAAC +
Preference number: 2 (lower is better)
Translates to: VNAPPQALTCLTCHCHVESDECE*PTSSPN
Trigger: GTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGA...CTCAACATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp AGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTCAACAGTGGGTGCAGAGCCTaGTCATCGAGAAAGATGAAA +
Preference number: 2 (lower is better)
Translates to: RRGIKNASRGRWVNQKVNSGCRA*SSRKMK
Trigger: TTTCATCTTTCTCGATGAGCAGGCTCTGCACCCACT...GTTGACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp CAGGGATGCTGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGACTAGCCAGAGTTACTTaGAGTTGCACTCACAAGTGG +
Preference number: 2 (lower is better)
Translates to: QGCCHILLTQELTKSYQRLARVT*SCTHKW
Trigger: CCACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAG...TCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCAGCATCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CCA 90 bp AGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACCACAGTTGGAGACTCTaGGGGACTGACTTGTCCAGA +
Preference number: 2 (lower is better)
Translates to: SQMNVNAPPQALTCLTCHHSWRL*GTDLSR
Trigger: TCTGGACAAGTCAGTCCCCCAGAGTCTCCAACTGTG...GTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp TCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCGGAAGTGGTCACAGTTaGAGACTCTGGGGGACTGAC +
Preference number: 2 (lower is better)
Translates to: STNVQTAAGGSNSSQYNSGSGHS*RLWGTD
Trigger: GTCAGTCCCCCAGAGTCTCCAACTGTGACCACTTCC...GGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp GCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTTTGCAGCTCCCGCGCTaGCAAGACCACAGAAGCCAC +
Preference number: 2 (lower is better)
Translates to: AGGSNSSQYNSNLTSFCLLQLPR*QDHRSH
Trigger: GTGGCTTCTGTGGTCTTGCCAGCGCGGGAGCTGCAA...AAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp CTCAGAGATGAACCTGGCTTCGATTGGTGCTTGAATGCGCTCAGCCAATGGGTGATGAGCGGAGGCCCTTaGGATTTACAGTCAGATGAA +
Preference number: 2 (lower is better)
Translates to: LRDEPGFDWCLNALSQWVMSGGP*DLQSDE
Trigger: TTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCAT...CACCCATTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGGTTCATCTCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CCA 90 bp ACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAATGAGCGGAGGCCCTTaGGATTTACAGTCAGATGAA +
Preference number: 2 (lower is better)
Translates to: TFSFVISGRGCHWHLVGGMSGGP*DLQSDE
Trigger: TTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCAT...TCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CCA 90 bp GAAATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACATGAGCGGAGGCCCTTaGGATTTACAGTCAGATGAA +
Preference number: 2 (lower is better)
Translates to: EMQVRRGIKNASRGRWVNMSGGP*DLQSDE
Trigger: TTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCAT...GTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CCA 90 bp GTGCAGAGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGGCAAGCCCTCGCCCGTaGGATCTTAGCAGGAACCTG +
Preference number: 2 (lower is better)
Translates to: VQSLLIEKDEILRGLRAKASPRP*DLSRNL
Trigger: CAGGTTCCTGCTAAGATCCCACGGGCGAGGGCTTGC...CTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCTCTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CCA 90 bp TCTGTTAGCAATCAGATAGCCTACAAGGCCGTCTTGATGGGTATGATCACCACCAGTTGCACTCACAAGTaGGGACCCCAGGTCTCCTTC +
Preference number: 2 (lower is better)
Translates to: SVSNQIAYKAVLMGMITTSCTHK*GPQVSF
Trigger: GAAGGAGACCTGGGGTCCCCACTTGTGAGTGCAACT...GGTGGTGATCATACCCATCAAGACGGCCTTGTAGGCTATCTGATTGCTAACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CCA 90 bp GAAATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACGGTATAAGTTGGAGGTaGAAGGAATGGCCTCCTACT +
Preference number: 2 (lower is better)
Translates to: EMQVRRGIKNASRGRWVNGISWR*KEWPPT
Trigger: AGTAGGAGGCCATTCCTTCCACCTCCAACTTATACC...GTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CCA 90 bp GGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTTTAGAGGGTATAAGTTaGAGGTGGAAGGAATGGCCT +
Preference number: 2 (lower is better)
Translates to: GEKGYQECLEGEMGEPEGLEGIS*RWKEWP
Trigger: AGGCCATTCCTTCCACCTCCAACTTATACCCTCTAA...ACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp ATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCAGTAGCTGAGTCCCTGAGAGGCAGCTaGGAGTACGGGCGAGCACCC +
Preference number: 2 (lower is better)
Translates to: IEKDEILRGLRAKKSVAESLRGS*EYGRAP
Trigger: GGGTGCTCGCCCGTACTCTCAGCTGCCTCTCAGGGA...CTCAGCTACTGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp GTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGCAGGGAACAGTGCAGTCCCTaGGAGGCAGCTGAGAGTACG +
Preference number: 2 (lower is better)
Translates to: VHISKIPKGSIFTRWSCREQCSP*EAAEST
Trigger: CGTACTCTCAGCTGCCTCTCAGGGACTGCACTGTTC...CCTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp GTGGAGGAATGTCTAACAGGTGGGAAAATAAAGCAGCAAGTAGCCGCTTCCATAGAAGCTTCGGGGACTTaGCAGACTGAGTCCAGAGCA +
Preference number: 2 (lower is better)
Translates to: VEECLTGGKIKQQVAASIEASGT*QTESRA
Trigger: TGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTC...TATGGAAGCGGCTACTTGCTGCTTTATTTTCCCACCTGTTAGACATTCCTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp GTGTCTGTTAGCAATCAGATAGCCTACAAGGCCGTCTTGATGGGTATGATCACCTCAGCAGCTCAGAGATaGACCTGGCTTCGATTGGTG +
Preference number: 2 (lower is better)
Translates to: VSVSNQIAYKAVLMGMITSAAQR*TWLRLV
Trigger: CACCAATCGAAGCCAGGTTCATCTCTGAGCTGCTGA...GGTGATCATACCCATCAAGACGGCCTTGTAGGCTATCTGATTGCTAACAGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp CAACTCTGGCTAGCTGACAGTGACACAGGTAAGCTCTCAGACTGCCAGGAAGTGGTATTCCTCCTCCTCTaGCTCAAGACTAAACACAGT +
Preference number: 2 (lower is better)
Translates to: QLWLADSDTGKLSDCQEVVFLLL*LKTKHS
Trigger: ACTGTGTTTAGTCTTGAGTCAGAGGAGGAGGAATAC...CACTTCCTGGCAGTCTGAGAGCTTACCTGTGTCACTGTCAGCTAGCCAGAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399777.1
ENST00000498133.5
3UTR-3UTR GCA 90 bp AAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTGGCAGGCTTTCTGTGTaGCAACTCTGGCTAGCTGAC +
Preference number: 2 (lower is better)
Translates to: KCPDSCWRFKFQPIQLQPGRLSV*QLWLAD
Trigger: GTCAGCTAGCCAGAGTTGGCACACAGAAAGCCTGCC...AGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp GTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTGGCAGGCTTTCTGTGTaGCAACTCTGGCTAGCTGAC +
Preference number: 2 (lower is better)
Translates to: VPQMSRQLLEVQIPANTTGRLSV*QLWLAD
Trigger: GTCAGCTAGCCAGAGTTGGCACACAGAAAGCCTGCC...AGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp ACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGATCTCTCCAGCTCCGTTaGTGTCTAAGCTTTTCACTT +
Preference number: 2 (lower is better)
Translates to: TFSFVISGRGCHWHLVGGSLQLR*CLSFSL
Trigger: AAGTGAAAAGCTTAGACAGCAACGGAGCTGGAGAGA...TCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp GATTCTCAATTTAGCATGAGCGGAGGCCCTTGGGATTTACAGTCAGATGAATGTCAGCAGCCTCTTCCATaGCCTCGGGCACCTCTTCTT +
Preference number: 2 (lower is better)
Translates to: DSQFSMSGGPWDLQSDECQQPLP*PRAPLL
Trigger: AAGAAGAGGTGCCCGAGGGCATGGAAGAGGCTGCTG...ACATTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp CTCTGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTCAGGAAGTGCCTCTTaGAGCTCCCGCGCTGGCAAG +
Preference number: 2 (lower is better)
Translates to: LCVHISKIPKGSIFTRWSSGSAS*SSRAGK
Trigger: CTTGCCAGCGCGGGAGCTGCAAGAGGCACTTCCTGA...GCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp CAGGATGGCAACAGCAGCAGCCCCTCCAAACAGCAGTATAGACTTGCCCTCAGAAGGTTCAGTTGTTGCTaGTTTCACCTCTTCTTCATC +
Preference number: 2 (lower is better)
Translates to: QDGNSSSPSKQQYRLALRRFSCC*FHLFFI
Trigger: GATGAAGAAGAGGTGAAAGCAGCAACAACTGAACCT...TCTGAGGGCAAGTCTATACTGCTGTTTGGAGGGGCTGCTGCTGTTGCCATCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp CTCAGAGATGAACCTGGCTTCGATTGGTGCTTGAATGCGCTCAGCCAATGGGTGAAATGTCCAGACAGCTaGTGGAGGTTCAAATTCCAG +
Preference number: 2 (lower is better)
Translates to: LRDEPGFDWCLNALSQWVKCPDS*WRFKFQ
Trigger: CTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTT...CACCCATTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGGTTCATCTCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp CCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGGAAGAGTTACTTGCAGTTaGACTCACAAGTGGGGACCC +
Preference number: 2 (lower is better)
Translates to: PHPVNSGADQELPEKANGRVTCS*THKWGP
Trigger: GGGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCT...TCCATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp GTGTCTGTTAGCAATCAGATAGCCTACAAGGCCGTCTTGATGGGTATGATCACCCCTGGCTTCGATTGGTaGTTGAATGCGCTCAGCCAA +
Preference number: 2 (lower is better)
Translates to: VSVSNQIAYKAVLMGMITPGFDW*LNALSQ
Trigger: TTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGG...GGTGATCATACCCATCAAGACGGCCTTGTAGGCTATCTGATTGCTAACAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CCA 90 bp CAATGTCTAGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATTCTGTGTGCCAACTCTaGCTAGCTGACAGTGACACA +
Preference number: 2 (lower is better)
Translates to: QCLETFSFVISGRGCHWHSVCQL*LADSDT
Trigger: TGTGTCACTGTCAGCTAGCCAGAGTTGGCACACAGA...ATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCTAGACATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp TGGGACACTAAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACATTGCAGCTCCCGCGCTaGCAAGACCACAGAAGCCAC +
Preference number: 2 (lower is better)
Translates to: WDTKTQNKDTLQDKAGKTLQLPR*QDHRSH
Trigger: GTGGCTTCTGTGGTCTTGCCAGCGCGGGAGCTGCAA...TGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTTAGTGTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp GATTCTCAATTTAGCATGAGCGGAGGCCCTTGGGATTTACAGTCAGATGAATGTGGTGGCAGTGATATGTaGAAGCAAGGGAGCTGGGGC +
Preference number: 2 (lower is better)
Translates to: DSQFSMSGGPWDLQSDECGGSDM*KQGSWG
Trigger: GCCCCAGCTCCCTTGCTTCCACATATCACTGCCACC...ACATTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp TGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGTGTCCAGACAGCTGCTaGAGGTTCAAATTCCAGCCA +
Preference number: 2 (lower is better)
Translates to: CHILLTQELTKSYQRKPMCPDSC*RFKFQP
Trigger: TGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACA...CATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CCA 90 bp TCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCATGTCCAGACAGCTGCTaGAGGTTCAAATTCCAGCCA +
Preference number: 2 (lower is better)
Translates to: SPIIPECSTNVQTAAGGSCPDSC*RFKFQP
Trigger: TGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACA...TGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR CAA 90 bp TCGCTAAAGCAGTGGGTCTCAATAGGGGATGTTCACACGGGACATTaGGCAATGTCTAGAGACATTTTCGTTTGTCATCTCTGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: SLKQWVSIGDVHTGH*AMSRDIFVCHLWEG
Trigger: CCCCTCCCAGAGATGACAAACGAAAATGTCTCTAGACATTGCCAAATGTCCCGTGTGAACATCCCCTATTGAGACCCACTGCTTTAGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR CAA 90 bp TCACGCCAAACTGCAGCAGTGCGCTCAAAGGTTCTTGACCACGTCTaGTCAATTCCAAAAGCATTTGTCGTAGCAAAACCAGAGGCACCA +
Preference number: 2 (lower is better)
Translates to: SRQTAAVRSKVLDHV*SIPKAFVVAKPEAP
Trigger: TGGTGCCTCTGGTTTTGCTACGACAAATGCTTTTGGAATTGACAAGACGTGGTCAAGAACCTTTGAGCGCACTGCTGCAGTTTGGCGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498133.5
3UTR-3UTR TCA 90 bp GGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTGCTCATCGAGAAAGATaGAATTCTAAGGGGATTAAG +
Preference number: 2 (lower is better)
Translates to: GEKGYQECLEGEMGEPEGAHRER*NSKGIK
Trigger: CTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGC...ACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp AGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGGTCATTGCTATCTTCTaGAGTGATTCCAGGGTATTC +
Preference number: 2 (lower is better)
Translates to: RDIFVCHLWEGVPLASSGVIAIF*SDSRVF
Trigger: GAATACCCTGGAATCACTGCAGAAGATAGCAATGAC...CCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp GTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGCAGGGGCAGGCTTTCTGTGTaGCAACTCTGGCTAGCTGAC +
Preference number: 2 (lower is better)
Translates to: VHISKIPKGSIFTRWSCRGRLSV*QLWLAD
Trigger: GTCAGCTAGCCAGAGTTGGCACACAGAAAGCCTGCC...CCTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp CTCCAGCTCCGTTGCTGTCTAAGCTTTTCACTTCTTCAGGATCCATTGCAATCTTCCATTGCAATCTGCTaGCAGGACTCAGGGCCTAGT +
Preference number: 2 (lower is better)
Translates to: LQLRCCLSFSLLQDPLQSSIAIC*QDSGPS
Trigger: ACTAGGCCCTGAGTCCTGGCAGCAGATTGCAATGGA...AGATTGCAATGGATCCTGAAGAAGTGAAAAGCTTAGACAGCAACGGAGCTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp TCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTTCAGTTGTTTCTTCTTTCTCCACGTaGACAATGTCAGAATTAGAG +
Preference number: 2 (lower is better)
Translates to: SVGSSAGTTSSTSVGSVVSSFST*TMSELE
Trigger: CTCTAATTCTGACATTGTGCACGTGGAGAAAGAAGA...AACAACTGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp ATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCAGTAGCTGAGTGGGGCTTCAGGAAGTaGCTCTTGCAGCTCCCGCGC +
Preference number: 2 (lower is better)
Translates to: IEKDEILRGLRAKKSVAEWGFRK*LLQLPR
Trigger: GCGCGGGAGCTGCAAGAGGCACTTCCTGAAGCCCCA...CTCAGCTACTGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp AGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCATTCTGTGGGTTCCAGTaGGGGGACCACCTCCTCCAC +
Preference number: 2 (lower is better)
Translates to: SLLIEKDEILRGLRAKKSFCGFQ*GDHLLH
Trigger: GTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAA...TGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp TCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCTGCCTAACATGCCACTaGCATGTTGAGCAGAAGTCC +
Preference number: 2 (lower is better)
Translates to: STNVQTAAGGSNSSQYNSCLTCH*HVEQKS
Trigger: GGACTTCTGCTCAACATGGCAGTGGCATGTTAGGCA...GGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp CAATGTCTAGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAACATGCCTAACATaGCACTGCCATGTTGAGCAG +
Preference number: 2 (lower is better)
Translates to: QCLETFSFVISGRGCHWHLTCLT*HCHVEQ
Trigger: CTGCTCAACATGGCAGTGGCATGTTAGGCATGTTAG...ATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCTAGACATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp TGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGCTAACATGCCTAACATaGCACTGCCATGTTGAGCAG +
Preference number: 2 (lower is better)
Translates to: CHILLTQELTKSYQRKPMLTCLT*HCHVEQ
Trigger: CTGCTCAACATGGCAGTGGCATGTTAGGCATGTTAG...CATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp TCTGTTAGCAATCAGATAGCCTACAAGGCCGTCTTGATGGGTATGATCACCACCCCTCAAGCCCTAACATaGCTAACATGCCACTGCCAT +
Preference number: 2 (lower is better)
Translates to: SVSNQIAYKAVLMGMITTPQALT*LTCHCH
Trigger: ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGG...GGTGGTGATCATACCCATCAAGACGGCCTTGTAGGCTATCTGATTGCTAACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp CAATGTCTAGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATTCAGATGAATGTGAATaGCCCACCTCAAGCCCTAAC +
Preference number: 2 (lower is better)
Translates to: QCLETFSFVISGRGCHWHSDECE*PTSSPN
Trigger: GTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGA...ATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCTAGACATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp GAAATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACGATAACGCACCAGTTTaGTCTTCACCTATGCAAACA +
Preference number: 2 (lower is better)
Translates to: EMQVRRGIKNASRGRWVNDNAPV*SSPMQT
Trigger: TGTTTGCATAGGTGAAGAGCAAACTGGTGCGTTATC...GTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CCA 90 bp TCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGGTCCAGAGTTGTCGCTaGGCAGGATGTAAATGTCAT +
Preference number: 2 (lower is better)
Translates to: SDECECPTSSPNMPNMPLVQSCR*AGCKCH
Trigger: ATGACATTTACATCCTGCCCAGCGACAACTCTGGAC...CAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp ATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATGTCCAGAGTTGTCGCTaGGCAGGATGTAAATGTCAT +
Preference number: 2 (lower is better)
Translates to: MNVNAPPQALTCLTCHCHVQSCR*AGCKCH
Trigger: ATGACATTTACATCCTGCCCAGCGACAACTCTGGAC...ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp AGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCATTGCAGCTCCCGCGCTaGCAAGACCACAGAAGCCAC +
Preference number: 2 (lower is better)
Translates to: SLLIEKDEILRGLRAKKSLQLPR*QDHRSH
Trigger: GTGGCTTCTGTGGTCTTGCCAGCGCGGGAGCTGCAA...TGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp AGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCAGCAAGCCCTCGCCCGTaGGATCTTAGCAGGAACCTG +
Preference number: 2 (lower is better)
Translates to: SLLIEKDEILRGLRAKKSASPRP*DLSRNL
Trigger: CAGGTTCCTGCTAAGATCCCACGGGCGAGGGCTTGC...TGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR CAA 90 bp GGCACCTCTTCTTTCTCCACGTGCACAATGTCAGAATTAGAGGAGTaGTTCTCACTCTTCTCTCCAGCTCCGTTGCTGTCTAAGCTTTTC +
Preference number: 2 (lower is better)
Translates to: GTSSFSTCTMSELEE*FSLFSPAPLLSKLF
Trigger: GAAAAGCTTAGACAGCAACGGAGCTGGAGAGAAGAGTGAGAACAACTCCTCTAATTCTGACATTGTGCACGTGGAGAAAGAAGAGGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR TCA 90 bp TGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATGCCACTGCCATGTTaGGCAGAAGTCCCCAATTAT +
Preference number: 2 (lower is better)
Translates to: CPDSCWRFKFQPIQLQPYMPLPC*AEVPNY
Trigger: ATAATTGGGGACTTCTGCTCAACATGGCAGTGGCAT...GTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp GTGTCTGTTAGCAATCAGATAGCCTACAAGGCCGTCTTGATGGGTATGATCACCATGCCACTGCCATGTTaGGCAGAAGTCCCCAATTAT +
Preference number: 2 (lower is better)
Translates to: VSVSNQIAYKAVLMGMITMPLPC*AEVPNY
Trigger: ATAATTGGGGACTTCTGCTCAACATGGCAGTGGCAT...GGTGATCATACCCATCAAGACGGCCTTGTAGGCTATCTGATTGCTAACAGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp TGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATTCTCAATTTAGCATaGGCGGAGGCCCTTGGGATT +
Preference number: 2 (lower is better)
Translates to: CPDSCWRFKFQPIQLQPYILNLA*AEALGI
Trigger: AATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAAT...GTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp TGGGTGAACCAGAAGGTCAACAGTTGCATTTCTTCATCTAGAATGTTCTCTAGAGAACAGTGCAGTCCCTaGGAGGCAGCTGAGAGTACG +
Preference number: 2 (lower is better)
Translates to: WVNQKVNSCISSSRMFSREQCSP*EAAEST
Trigger: CGTACTCTCAGCTGCCTCTCAGGGACTGCACTGTTC...TCTAGAGAACATTCTAGATGAAGAAATGCAACTGTTGACCTTCTGGTTCACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp TGGGACACTAAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACAGAAGCTTCGGGGACTTaGCAGACTGAGTCCAGAGCA +
Preference number: 2 (lower is better)
Translates to: WDTKTQNKDTLQDKAGKTEASGT*QTESRA
Trigger: TGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTC...TGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTTAGTGTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp TGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGCAGTTCCAGCCGCTGGCATaGACTGTGGTCTCCAGTGTA +
Preference number: 2 (lower is better)
Translates to: CTYFEDSQRQHFYKVELQFQPLA*TVVSSV
Trigger: TACACTGGAGACCACAGTTCATGCCAGCGGCTGGAA...CTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498133.5
3UTR-3UTR GCA 90 bp CTTTCTGTGTGCCAACTCTGGCTAGCTGACAGTGACACAGGTAAGCTCTCAGACGTCATTGCTATCTTCTaGAGTGATTCCAGGGTATTC +
Preference number: 2 (lower is better)
Translates to: LSVCQLWLADSDTGKLSDVIAIF*SDSRVF
Trigger: GAATACCCTGGAATCACTGCAGAAGATAGCAATGAC...GTCTGAGAGCTTACCTGTGTCACTGTCAGCTAGCCAGAGTTGGCACACAGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp TTCTCCACGTGCACAATGTCAGAATTAGAGGAGTTGTTCTCACTCTTCTCTCCATCCATTGCAATCTGCTaGCAGGACTCAGGGCCTAGT +
Preference number: 2 (lower is better)
Translates to: FSTCTMSELEELFSLFSPSIAIC*QDSGPS
Trigger: ACTAGGCCCTGAGTCCTGGCAGCAGATTGCAATGGA...TGGAGAGAAGAGTGAGAACAACTCCTCTAATTCTGACATTGTGCACGTGGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp GATTCTCAATTTAGCATGAGCGGAGGCCCTTGGGATTTACAGTCAGATGAATGTTCCATTGCAATCTGCTaGCAGGACTCAGGGCCTAGT +
Preference number: 2 (lower is better)
Translates to: DSQFSMSGGPWDLQSDECSIAIC*QDSGPS
Trigger: ACTAGGCCCTGAGTCCTGGCAGCAGATTGCAATGGA...ACATTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp TCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCTTCTTCAGGATCCATTaGAATCTGCTGCCAGGACTC +
Preference number: 2 (lower is better)
Translates to: STNVQTAAGGSNSSQYNSFFRIH*NLLPGL
Trigger: GAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAA...GGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp AGAAGTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGTCTCTCCAGCTCCGTTaGTGTCTAAGCTTTTCACTT +
Preference number: 2 (lower is better)
Translates to: RSPQLSQSVPQMSRQLLESLQLR*CLSFSL
Trigger: AAGTGAAAAGCTTAGACAGCAACGGAGCTGGAGAGA...CTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGACTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp AGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACAAGGCTCTCTTCCCTTaGGTTTATCTCCTTCTCACT +
Preference number: 2 (lower is better)
Translates to: SQMNVNAPPQALTCLTCHKALFP*VYLLLT
Trigger: AGTGAGAAGGAGATAAACGCAAGGGAAGAGAGCCTT...GTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp GTGTCTGTTAGCAATCAGATAGCCTACAAGGCCGTCTTGATGGGTATGATCACCTCAGATGAATGTGAATaGCCCACCTCAAGCCCTAAC +
Preference number: 2 (lower is better)
Translates to: VSVSNQIAYKAVLMGMITSDECE*PTSSPN
Trigger: GTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGA...GGTGATCATACCCATCAAGACGGCCTTGTAGGCTATCTGATTGCTAACAGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CCA 90 bp TGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACGTCCAGAGTTGTCGCTaGGCAGGATGTAAATGTCAT +
Preference number: 2 (lower is better)
Translates to: CPDSCWRFKFQPIQLQPYVQSCR*AGCKCH
Trigger: ATGACATTTACATCCTGCCCAGCGACAACTCTGGAC...GTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp GTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGCAGGCACAGTTGGAGACTCTaGGGGACTGACTTGTCCAGA +
Preference number: 2 (lower is better)
Translates to: VHISKIPKGSIFTRWSCRHSWRL*GTDLSR
Trigger: TCTGGACAAGTCAGTCCCCCAGAGTCTCCAACTGTG...CCTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp AGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTGTGCCAACTCTaGCTAGCTGACAGTGACACA +
Preference number: 2 (lower is better)
Translates to: RQLLEVQIPANTTPTLHPSVCQL*LADSDT
Trigger: TGTGTCACTGTCAGCTAGCCAGAGTTGGCACACAGA...AGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp ATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCAGTAGCTGAGCGGGCTTCTTCTCGCTaGCAGGGGACAGCTCTTCCA +
Preference number: 2 (lower is better)
Translates to: IEKDEILRGLRAKKSVAERASSR*QGTALP
Trigger: TGGAAGAGCTGTCCCCTGCCAGCGAGAAGAAGCCCG...CTCAGCTACTGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp AATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCACTAAGTTCTCTCAGCTaGGAATTTCTATCCCAATTC +
Preference number: 2 (lower is better)
Translates to: NAGEKGYQECLEGEMGEPLSSLS*EFLSQF
Trigger: GAATTGGGATAGAAATTCCCAGCTGAGAGAACTTAG...TGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CCA 90 bp GAAATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACGGAATGTCTAACAGGTaGGAAAATAAAGCAGCAAGT +
Preference number: 2 (lower is better)
Translates to: EMQVRRGIKNASRGRWVNGMSNR*ENKAAS
Trigger: ACTTGCTGCTTTATTTTCCCACCTGTTAGACATTCC...GTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp AGGAGTTGTTCTCACTCTTCTCTCCAGCTCCGTTGCTGTCTAAGCTTTTCACTTTGCTATCTTCTGCAGTaGTTCCAGGGTATTCCTCCT +
Preference number: 2 (lower is better)
Translates to: RSCSHSSLQLRCCLSFSLCYLLQ*FQGIPP
Trigger: AGGAGGAATACCCTGGAATCACTGCAGAAGATAGCA...AAGTGAAAAGCTTAGACAGCAACGGAGCTGGAGAGAAGAGTGAGAACAACTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR TCA 90 bp TGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGTGGATTTCTCAACTGTaGTCACTTCTGTGTCAGGTT +
Preference number: 2 (lower is better)
Translates to: CHILLTQELTKSYQRKPMWISQL*SLLCQV
Trigger: AACCTGACACAGAAGTGATCACAGTTGAGAAATCCA...CATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR TCA 90 bp GTGGAGGAATGTCTAACAGGTGGGAAAATAAAGCAGCAAGTAGCCGCTTCCATAATTCTCAATTTAGCATaGGCGGAGGCCCTTGGGATT +
Preference number: 2 (lower is better)
Translates to: VEECLTGGKIKQQVAASIILNLA*AEALGI
Trigger: AATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAAT...TATGGAAGCGGCTACTTGCTGCTTTATTTTCCCACCTGTTAGACATTCCTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp GATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACAGCCACCTTGCTGAATaGTGTACTCTGCCGAATAGT +
Preference number: 2 (lower is better)
Translates to: DLQSDECECPTSSPNMPNSHLAE*CTLPNS
Trigger: ACTATTCGGCAGAGTACATCATTCAGCAAGGTGGCT...GTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399777.1
ENST00000498133.5
3UTR-3UTR GCA 90 bp ATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATGTCATTGCTATCTTCTaGAGTGATTCCAGGGTATTC +
Preference number: 2 (lower is better)
Translates to: MNVNAPPQALTCLTCHCHVIAIF*SDSRVF
Trigger: GAATACCCTGGAATCACTGCAGAAGATAGCAATGAC...ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp GTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTTTCTTCAGGATCCATTaGAATCTGCTGCCAGGACTC +
Preference number: 2 (lower is better)
Translates to: VPQMSRQLLEVQIPANTTFFRIH*NLLPGL
Trigger: GAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAA...AGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp TCTCTTCTGAAAAGCCTCCTATTTCTTTCTCAGAGCCAGGGCTACCCCGATGGCTCTTCTTTCTCCACGTaGACAATGTCAGAATTAGAG +
Preference number: 2 (lower is better)
Translates to: SLLKSLLFLSQSQGYPDGSSFST*TMSELE
Trigger: CTCTAATTCTGACATTGTGCACGTGGAGAAAGAAGA...GCCATCGGGGTAGCCCTGGCTCTGAGAAAGAAATAGGAGGCTTTTCAGAAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp TCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAAGGCTCTCTTCCCTTaGGTTTATCTCCTTCTCACT +
Preference number: 2 (lower is better)
Translates to: STNVQTAAGGSNSSQYNSKALFP*VYLLLT
Trigger: AGTGAGAAGGAGATAAACGCAAGGGAAGAGAGCCTT...GGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp GTGTCTGTTAGCAATCAGATAGCCTACAAGGCCGTCTTGATGGGTATGATCACCAAATGTCCAGACAGCTaGTGGAGGTTCAAATTCCAG +
Preference number: 2 (lower is better)
Translates to: VSVSNQIAYKAVLMGMITKCPDS*WRFKFQ
Trigger: CTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTT...GGTGATCATACCCATCAAGACGGCCTTGTAGGCTATCTGATTGCTAACAGACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp GTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGCAGGTGCCTAACATGCCACTaGCATGTTGAGCAGAAGTCC +
Preference number: 2 (lower is better)
Translates to: VHISKIPKGSIFTRWSCRCLTCH*HVEQKS
Trigger: GGACTTCTGCTCAACATGGCAGTGGCATGTTAGGCA...CCTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp GTGGAGGAATGTCTAACAGGTGGGAAAATAAAGCAGCAAGTAGCCGCTTCCATACTAACATGCCTAACATaGCACTGCCATGTTGAGCAG +
Preference number: 2 (lower is better)
Translates to: VEECLTGGKIKQQVAASILTCLT*HCHVEQ
Trigger: CTGCTCAACATGGCAGTGGCATGTTAGGCATGTTAG...TATGGAAGCGGCTACTTGCTGCTTTATTTTCCCACCTGTTAGACATTCCTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp CTATCCCAATTCTTCCTAAGTAAACCCTCTCTCGCTAAAGCAGTGGGTCTCAATCCTCAAGCCCTAACATaGCTAACATGCCACTGCCAT +
Preference number: 2 (lower is better)
Translates to: LSQFFLSKPSLAKAVGLNPQALT*LTCHCH
Trigger: ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGG...ATTGAGACCCACTGCTTTAGCGAGAGAGGGTTTACTTAGGAAGAATTGGGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp CTAACAGGTGGGAAAATAAAGCAGCAAGTAGCCGCTTCCATACCACATTTCTTCCCTCAAGCCCTAACATaGCTAACATGCCACTGCCAT +
Preference number: 2 (lower is better)
Translates to: LTGGKIKQQVAASIPHFFPQALT*LTCHCH
Trigger: ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGG...GAAGAAATGTGGTATGGAAGCGGCTACTTGCTGCTTTATTTTCCCACCTGTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp GTGCAGAGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGCCTCAAGCCCTAACATaGCTAACATGCCACTGCCAT +
Preference number: 2 (lower is better)
Translates to: VQSLLIEKDEILRGLRAKPQALT*LTCHCH
Trigger: ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGG...CTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCTCTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp GTGAACCAGAAGGTCAACAGTTGCATTTCTTCATCTAGAATGTTCTCTAGAAGGCGGTCCTGGAGGGGGTaGTTTACCCCTAAGATTCTC +
Preference number: 2 (lower is better)
Translates to: VNQKVNSCISSSRMFSRRRSWRG*FTPKIL
Trigger: GAGAATCTTAGGGGTAAAGCACCCCCTCCAGGACCG...CCTTCTAGAGAACATTCTAGATGAAGAAATGCAACTGTTGACCTTCTGGTTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp TGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACCTGAATGATGTACTCTaGCGAATAGTCCTCCAGGTA +
Preference number: 2 (lower is better)
Translates to: CPDSCWRFKFQPIQLQPYLNDVL*RIVLQV
Trigger: TACCTGGAGGACTATTCGGCAGAGTACATCATTCAG...GTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399777.1
ENST00000498133.5
3UTR-3UTR CCA 90 bp GCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTTCTGTGTGCCAACTCTaGCTAGCTGACAGTGACACA +
Preference number: 2 (lower is better)
Translates to: AGGSNSSQYNSNLTSFCLSVCQL*LADSDT
Trigger: TGTGTCACTGTCAGCTAGCCAGAGTTGGCACACAGA...AAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR TCA 90 bp CAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATTGGATTTCTCAACTGTaGTCACTTCTGTGTCAGGTT +
Preference number: 2 (lower is better)
Translates to: QSVPQMSRQLLEVQIPANWISQL*SLLCQV
Trigger: AACCTGACACAGAAGTGATCACAGTTGAGAAATCCA...ATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR TCA 90 bp TGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACTGGATTTCTCAACTGTaGTCACTTCTGTGTCAGGTT +
Preference number: 2 (lower is better)
Translates to: CPDSCWRFKFQPIQLQPYWISQL*SLLCQV
Trigger: AACCTGACACAGAAGTGATCACAGTTGAGAAATCCA...GTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp TCTGTTAGCAATCAGATAGCCTACAAGGCCGTCTTGATGGGTATGATCACCACCGTCATTGCTATCTTCTaGAGTGATTCCAGGGTATTC +
Preference number: 2 (lower is better)
Translates to: SVSNQIAYKAVLMGMITTVIAIF*SDSRVF
Trigger: GAATACCCTGGAATCACTGCAGAAGATAGCAATGAC...GGTGGTGATCATACCCATCAAGACGGCCTTGTAGGCTATCTGATTGCTAACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337612.9
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp TGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGCAGGGTAAGCTCTCAGACTaGCAGGAAGTGGTCACAGTT +
Preference number: 2 (lower is better)
Translates to: CTYFEDSQRQHFYKVELQGKLSD*QEVVTV
Trigger: AACTGTGACCACTTCCTGGCAGTCTGAGAGCTTACC...CTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp AAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACACACAAACATGGATCCATTGCAATCTaGTGCCAGGACTCAGGGCCT +
Preference number: 2 (lower is better)
Translates to: KTQNKDTLQDKAGKTHKHGSIAI*CQDSGP
Trigger: AGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCC...ATGTTTGTGTGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp CTATCCCAATTCTTCCTAAGTAAACCCTCTCTCGCTAAAGCAGTGGGTCTCAATTTCTTCAGGATCCATTaGAATCTGCTGCCAGGACTC +
Preference number: 2 (lower is better)
Translates to: LSQFFLSKPSLAKAVGLNFFRIH*NLLPGL
Trigger: GAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAA...ATTGAGACCCACTGCTTTAGCGAGAGAGGGTTTACTTAGGAAGAATTGGGATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp GCTCAGCCAATGGGTGTGAGGATCCAGAACTGGCAAGTGTTAATACTGGAACTCTCTTCTTTCTCCACGTaGACAATGTCAGAATTAGAG +
Preference number: 2 (lower is better)
Translates to: AQPMGVRIQNWQVLILELSSFST*TMSELE
Trigger: CTCTAATTCTGACATTGTGCACGTGGAGAAAGAAGA...GAGTTCCAGTATTAACACTTGCCAGTTCTGGATCCTCACACCCATTGGCTGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp GTGGAGGAATGTCTAACAGGTGGGAAAATAAAGCAGCAAGTAGCCGCTTCCATAAAGGCTCTCTTCCCTTaGGTTTATCTCCTTCTCACT +
Preference number: 2 (lower is better)
Translates to: VEECLTGGKIKQQVAASIKALFP*VYLLLT
Trigger: AGTGAGAAGGAGATAAACGCAAGGGAAGAGAGCCTT...TATGGAAGCGGCTACTTGCTGCTTTATTTTCCCACCTGTTAGACATTCCTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp TGGGACACTAAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACATGCCTAACATGCCACTaGCATGTTGAGCAGAAGTCC +
Preference number: 2 (lower is better)
Translates to: WDTKTQNKDTLQDKAGKTCLTCH*HVEQKS
Trigger: GGACTTCTGCTCAACATGGCAGTGGCATGTTAGGCA...TGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTTAGTGTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp AAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACACACAAACATCGGTCCTGGAGGGGGTaGTTTACCCCTAAGATTCTC +
Preference number: 2 (lower is better)
Translates to: KTQNKDTLQDKAGKTHKHRSWRG*FTPKIL
Trigger: GAGAATCTTAGGGGTAAAGCACCCCCTCCAGGACCG...ATGTTTGTGTGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CCA 90 bp TTCTCCACGTGCACAATGTCAGAATTAGAGGAGTTGTTCTCACTCTTCTCTCCAGTCCAGAGTTGTCGCTaGGCAGGATGTAAATGTCAT +
Preference number: 2 (lower is better)
Translates to: FSTCTMSELEELFSLFSPVQSCR*AGCKCH
Trigger: ATGACATTTACATCCTGCCCAGCGACAACTCTGGAC...TGGAGAGAAGAGTGAGAACAACTCCTCTAATTCTGACATTGTGCACGTGGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp AGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCACACAGTTGGAGACTCTaGGGGACTGACTTGTCCAGA +
Preference number: 2 (lower is better)
Translates to: SLLIEKDEILRGLRAKKSHSWRL*GTDLSR
Trigger: TCTGGACAAGTCAGTCCCCCAGAGTCTCCAACTGTG...TGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp TGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGCAGTGTCCAGACAGCTGCTaGAGGTTCAAATTCCAGCCA +
Preference number: 2 (lower is better)
Translates to: CTYFEDSQRQHFYKVELQCPDSC*RFKFQP
Trigger: TGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACA...CTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CCA 90 bp GTGAACCAGAAGGTCAACAGTTGCATTTCTTCATCTAGAATGTTCTCTAGAAGGTGGAGGTGGAAGGAATaGCCTCCTACTATCAGCTCC +
Preference number: 2 (lower is better)
Translates to: VNQKVNSCISSSRMFSRRWRWKE*PPTISS
Trigger: GGAGCTGATAGTAGGAGGCCATTCCTTCCACCTCCA...CCTTCTAGAGAACATTCTAGATGAAGAAATGCAACTGTTGACCTTCTGGTTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR CAA 90 bp AATGTCCACATCTCATACCTTTCAGGAGAAAGGCAAGGAGACTACTaGCCTTACTGTCATATTATTGAGGGAATCAGCGCAAAGCCTGAG +
Preference number: 2 (lower is better)
Translates to: NVHISYLSGERQGDY*PYCHIIEGISAKPE
Trigger: CTCAGGCTTTGCGCTGATTCCCTCAATAATATGACAGTAAGGCAAGTAGTCTCCTTGCCTTTCTCCTGAAAGGTATGAGATGTGGACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp AGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTGTCATTGCTATCTTCTaGAGTGATTCCAGGGTATTC +
Preference number: 2 (lower is better)
Translates to: RQLLEVQIPANTTPTLHPVIAIF*SDSRVF
Trigger: GAATACCCTGGAATCACTGCAGAAGATAGCAATGAC...AGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp AGTTGTTGCTGCTTTCACCTCTTCTTCATCAAGTTCTACAAACAGAGATGTAGCGGTAAGCTCTCAGACTaGCAGGAAGTGGTCACAGTT +
Preference number: 2 (lower is better)
Translates to: SCCCFHLFFIKFYKQRCSGKLSD*QEVVTV
Trigger: AACTGTGACCACTTCCTGGCAGTCTGAGAGCTTACC...GCTACATCTCTGTTTGTAGAACTTGATGAAGAAGAGGTGAAAGCAGCAACAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp CTCTGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTTCTTCAGGATCCATTaGAATCTGCTGCCAGGACTC +
Preference number: 2 (lower is better)
Translates to: LCVHISKIPKGSIFTRWSFFRIH*NLLPGL
Trigger: GAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAA...GCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp AAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTAGGTTCAGTTGTTGCTaGTTTCACCTCTTCTTCATC +
Preference number: 2 (lower is better)
Translates to: KCPDSCWRFKFQPIQLQPRFSCC*FHLFFI
Trigger: GATGAAGAAGAGGTGAAAGCAGCAACAACTGAACCT...AGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp GTGCAGAGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGGCTCTCTTCCCTTaGGTTTATCTCCTTCTCACT +
Preference number: 2 (lower is better)
Translates to: VQSLLIEKDEILRGLRAKKALFP*VYLLLT
Trigger: AGTGAGAAGGAGATAAACGCAAGGGAAGAGAGCCTT...CTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCTCTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp CTATCCCAATTCTTCCTAAGTAAACCCTCTCTCGCTAAAGCAGTGGGTCTCAATAAATGTCCAGACAGCTaGTGGAGGTTCAAATTCCAG +
Preference number: 2 (lower is better)
Translates to: LSQFFLSKPSLAKAVGLNKCPDS*WRFKFQ
Trigger: CTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTT...ATTGAGACCCACTGCTTTAGCGAGAGAGGGTTTACTTAGGAAGAATTGGGATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp GTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGCAGGAAATGTCCAGACAGCTaGTGGAGGTTCAAATTCCAG +
Preference number: 2 (lower is better)
Translates to: VHISKIPKGSIFTRWSCRKCPDS*WRFKFQ
Trigger: CTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTT...CCTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp CTAACAGGTGGGAAAATAAAGCAGCAAGTAGCCGCTTCCATACCACATTTCTTCAAATGTCCAGACAGCTaGTGGAGGTTCAAATTCCAG +
Preference number: 2 (lower is better)
Translates to: LTGGKIKQQVAASIPHFFKCPDS*WRFKFQ
Trigger: CTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTT...GAAGAAATGTGGTATGGAAGCGGCTACTTGCTGCTTTATTTTCCCACCTGTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp GTGAACCAGAAGGTCAACAGTTGCATTTCTTCATCTAGAATGTTCTCTAGAAGGTGCCTAACATGCCACTaGCATGTTGAGCAGAAGTCC +
Preference number: 2 (lower is better)
Translates to: VNQKVNSCISSSRMFSRRCLTCH*HVEQKS
Trigger: GGACTTCTGCTCAACATGGCAGTGGCATGTTAGGCA...CCTTCTAGAGAACATTCTAGATGAAGAAATGCAACTGTTGACCTTCTGGTTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp TGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGCAGTCAGATGAATGTGAATaGCCCACCTCAAGCCCTAAC +
Preference number: 2 (lower is better)
Translates to: CTYFEDSQRQHFYKVELQSDECE*PTSSPN
Trigger: GTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGA...CTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp TGGGTGAACCAGAAGGTCAACAGTTGCATTTCTTCATCTAGAATGTTCTCTAGAAGAGTTACTTGCAGTTaGACTCACAAGTGGGGACCC +
Preference number: 2 (lower is better)
Translates to: WVNQKVNSCISSSRMFSRRVTCS*THKWGP
Trigger: GGGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCT...TCTAGAGAACATTCTAGATGAAGAAATGCAACTGTTGACCTTCTGGTTCACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp CTAAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACACACAAACAGAGTTACTTGCAGTTaGACTCACAAGTGGGGACCC +
Preference number: 2 (lower is better)
Translates to: LKHRTKTRYRIKLERHTNRVTCS*THKWGP
Trigger: GGGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCT...GTTTGTGTGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp TGGGACACTAAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACACTAGCCAGAGTTACTTaGAGTTGCACTCACAAGTGG +
Preference number: 2 (lower is better)
Translates to: WDTKTQNKDTLQDKAGKTLARVT*SCTHKW
Trigger: CCACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAG...TGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTTAGTGTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp CCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGGAGAGGAAAGAAAATTATaGCGATGCTCAACTAGCATA +
Preference number: 2 (lower is better)
Translates to: PHPVNSGADQELPEKANGEERKL*RCSTSI
Trigger: TATGCTAGTTGAGCATCGGCATAATTTTCTTTCCTC...TCCATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CCA 90 bp TCTGTTAGCAATCAGATAGCCTACAAGGCCGTCTTGATGGGTATGATCACCACCGGAATGTCTAACAGGTaGGAAAATAAAGCAGCAAGT +
Preference number: 2 (lower is better)
Translates to: SVSNQIAYKAVLMGMITTGMSNR*ENKAAS
Trigger: ACTTGCTGCTTTATTTTCCCACCTGTTAGACATTCC...GGTGGTGATCATACCCATCAAGACGGCCTTGTAGGCTATCTGATTGCTAACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp AGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCAATTCTCAATTTAGCATaGGCGGAGGCCCTTGGGATT +
Preference number: 2 (lower is better)
Translates to: SLLIEKDEILRGLRAKKSILNLA*AEALGI
Trigger: AATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAAT...TGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp GTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGCAGGAGGTTCAGTTGTTGCTaGTTTCACCTCTTCTTCATC +
Preference number: 2 (lower is better)
Translates to: VHISKIPKGSIFTRWSCRRFSCC*FHLFFI
Trigger: GATGAAGAAGAGGTGAAAGCAGCAACAACTGAACCT...CCTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp GTGTCTGTTAGCAATCAGATAGCCTACAAGGCCGTCTTGATGGGTATGATCACCGAGGAAAGAAAATTATaGCGATGCTCAACTAGCATA +
Preference number: 2 (lower is better)
Translates to: VSVSNQIAYKAVLMGMITEERKL*RCSTSI
Trigger: TATGCTAGTTGAGCATCGGCATAATTTTCTTTCCTC...GGTGATCATACCCATCAAGACGGCCTTGTAGGCTATCTGATTGCTAACAGACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp TTTCTCTGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGTATGTCACGCCAAACTaGAGCAGTGCGCTCAAAGGT +
Preference number: 2 (lower is better)
Translates to: FLCVHISKIPKGSIFTRWYVTPN*SSALKG
Trigger: ACCTTTGAGCGCACTGCTGCAGTTTGGCGTGACATA...CCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACAGAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399777.1
ENST00000498133.5
3UTR-3UTR CCA 90 bp ATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCAGTAGCTGAGTGTCCAGACAGCTGCTaGAGGTTCAAATTCCAGCCA +
Preference number: 2 (lower is better)
Translates to: IEKDEILRGLRAKKSVAECPDSC*RFKFQP
Trigger: TGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACA...CTCAGCTACTGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp GTGCAGAGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGGCTCATCGAGAAAGATaGAATTCTAAGGGGATTAAG +
Preference number: 2 (lower is better)
Translates to: VQSLLIEKDEILRGLRAKAHRER*NSKGIK
Trigger: CTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGC...CTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCTCTGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp GTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGCAGGGCTCATCGAGAAAGATaGAATTCTAAGGGGATTAAG +
Preference number: 2 (lower is better)
Translates to: VHISKIPKGSIFTRWSCRAHRER*NSKGIK
Trigger: CTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGC...CCTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp GTGAACCAGAAGGTCAACAGTTGCATTTCTTCATCTAGAATGTTCTCTAGAAGGAAGGAAGAACAGGGATaGTGCCACATCCTGTTAACT +
Preference number: 2 (lower is better)
Translates to: VNQKVNSCISSSRMFSRRKEEQG*CHILLT
Trigger: AGTTAACAGGATGTGGCAGCATCCCTGTTCTTCCTT...CCTTCTAGAGAACATTCTAGATGAAGAAATGCAACTGTTGACCTTCTGGTTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp GTGAACCAGAAGGTCAACAGTTGCATTTCTTCATCTAGAATGTTCTCTAGAAGGTGGATTTCTCAACTGTaGTCACTTCTGTGTCAGGTT +
Preference number: 2 (lower is better)
Translates to: VNQKVNSCISSSRMFSRRWISQL*SLLCQV
Trigger: AACCTGACACAGAAGTGATCACAGTTGAGAAATCCA...CCTTCTAGAGAACATTCTAGATGAAGAAATGCAACTGTTGACCTTCTGGTTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp ATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCAGTAGCTGAGTCTCTCCAGCTCCGTTaGTGTCTAAGCTTTTCACTT +
Preference number: 2 (lower is better)
Translates to: IEKDEILRGLRAKKSVAESLQLR*CLSFSL
Trigger: AAGTGAAAAGCTTAGACAGCAACGGAGCTGGAGAGA...CTCAGCTACTGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR TCA 90 bp AGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCAGCTCATCGAGAAAGATaGAATTCTAAGGGGATTAAG +
Preference number: 2 (lower is better)
Translates to: SLLIEKDEILRGLRAKKSAHRER*NSKGIK
Trigger: CTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGC...TGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp TGGGTGAACCAGAAGGTCAACAGTTGCATTTCTTCATCTAGAATGTTCTCTAGAGCTCATCGAGAAAGATaGAATTCTAAGGGGATTAAG +
Preference number: 2 (lower is better)
Translates to: WVNQKVNSCISSSRMFSRAHRER*NSKGIK
Trigger: CTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGC...TCTAGAGAACATTCTAGATGAAGAAATGCAACTGTTGACCTTCTGGTTCACCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp CTAAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACACACAAACTCTTCTTTCTCCACGTaGACAATGTCAGAATTAGAG +
Preference number: 2 (lower is better)
Translates to: LKHRTKTRYRIKLERHTNSSFST*TMSELE
Trigger: CTCTAATTCTGACATTGTGCACGTGGAGAAAGAAGA...GTTTGTGTGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp GCCCTCAGACAGCGGCATGGGCTTCATCTCACCGGCGGGGGACAGTCTAGACTTGGGGACAGTCTAGACTaGCCCTCAGACGGCGGCACG +
Preference number: 3 (lower is better)
Translates to: ALRQRHGLHLTGGGQSRLGDSLD*PSDGGT
Trigger: CGTGCCGCCGTCTGAGGGCAAGTCTAGACTGTCCCC...AAGTCTAGACTGTCCCCCGCCGGTGAGATGAAGCCCATGCCGCTGTCTGAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp CAGCAGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGGGGGACAGTCTAGACTaGCCCTCAGACGGCGGCACG +
Preference number: 3 (lower is better)
Translates to: QQRFCGFQCGDHLLHFSRGDSLD*PSDGGT
Trigger: CGTGCCGCCGTCTGAGGGCAAGTCTAGACTGTCCCC...CCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp CTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCTTAGGGGACAGTCTAGACTaGCCCTCAGACGGCGGCACG +
Preference number: 3 (lower is better)
Translates to: LRGLDRLSPEQALARGILGDSLD*PSDGGT
Trigger: CGTGCCGCCGTCTGAGGGCAAGTCTAGACTGTCCCC...TAAGATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR TCA 72 bp CAGGAACCTGGGGGTGAAGAGGAACAGTGCAGTCCCTaGGAGGCAGCTGAGAGTACGGGCGAGCACCCTCAC +
Preference number: 3 (lower is better)
Translates to: QEPGGEEEQCSP*EAAESTGEHPH
Trigger: GTGAGGGTGCTCGCCCGTACTCTCAGCTGCCTCTCAGGGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR GCA 72 bp GGAAGCAAGGGAGCTGGGGCTTCAGGAAGTGCCTCTTaGAGCTCCCGCGCTGGCAAGACCACAGAAGCCACA +
Preference number: 3 (lower is better)
Translates to: GSKGAGASGSAS*SSRAGKTTEAT
Trigger: TGTGGCTTCTGTGGTCTTGCCAGCGCGGGAGCTGCAAGAGGCACTTCCTGAAGCCCCAGCTCCCTTGCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp GGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTTCAGTTGTTGCTGCTGGGGACAGTCTAGACTaGCCCTCAGACGGCGGCACG +
Preference number: 3 (lower is better)
Translates to: GSSAGTTSSTSVGSVVAAGDSLD*PSDGGT
Trigger: CGTGCCGCCGTCTGAGGGCAAGTCTAGACTGTCCCC...AGCAGCAACAACTGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp GGCACAGTGGTGGGCACCTATAGTCCCAGCCTGTGCTCTTGGCTATTCAGGACCCTTGAGCCCAGGAGTTaGAGACCGAAGCCTGCCATG +
Preference number: 3 (lower is better)
Translates to: GTVVGTYSPSLCSWLFRTLEPRS*RPKPAM
Trigger: CATGGCAGGCTTCGGTCTCAAACTCCTGGGCTCAAG...GGTCCTGAATAGCCAAGAGCACAGGCTGGGACTATAGGTGCCCACCACTGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493680.5
3UTR-3UTR CAA 90 bp CAGGATGGCAACAGCAGCAGCCCCTCCAAACAGCAGTATAGACTTGCCCTCAGACTCTGGGGGACTGACTaGTCCAGAGTTGTCGCTGGG +
Preference number: 3 (lower is better)
Translates to: QDGNSSSPSKQQYRLALRLWGTD*SRVVAG
Trigger: CCCAGCGACAACTCTGGACAAGTCAGTCCCCCAGAG...TCTGAGGGCAAGTCTATACTGCTGTTTGGAGGGGCTGCTGCTGTTGCCATCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp GCGGGGACCACCTCCTCCACTTCAGTAGGTTCAGTTGTTGCTGCTTTCACCTCTCTCTGGGGGACTGACTaGTCCAGAGTTGTCGCTGGG +
Preference number: 3 (lower is better)
Translates to: AGTTSSTSVGSVVAAFTSLWGTD*SRVVAG
Trigger: CCCAGCGACAACTCTGGACAAGTCAGTCCCCCAGAG...AGAGGTGAAAGCAGCAACAACTGAACCTACTGAAGTGGAGGAGGTGGTCCCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp AAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCCAGAGTTACTTGCAGTaGCACTCACAAGTGGGGACC +
Preference number: 3 (lower is better)
Translates to: KLRGLDRLSPEQALARGIQSYLQ*HSQVGT
Trigger: GGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCTG...GATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR CCA 72 bp CTCAGACTGCCAGGAAGTGGTCACAGTTGGAGACTCTaGGGGACTGACTTGTCCAGAGTTGTCGCTGGGCAG +
Preference number: 3 (lower is better)
Translates to: LRLPGSGHSWRL*GTDLSRVVAGQ
Trigger: CTGCCCAGCGACAACTCTGGACAAGTCAGTCCCCCAGAGTCTCCAACTGTGACCACTTCCTGGCAGTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp CAGCAGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGCAAGGCTCTCTTCCCTaGCGTTTATCTCCTTCTCAC +
Preference number: 3 (lower is better)
Translates to: QQRFCGFQCGDHLLHFSRQGSLP*RLSPSH
Trigger: GTGAGAAGGAGATAAACGCAAGGGAAGAGAGCCTTG...CCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp CAGAAGTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGGGACAGTCTAGACTaGCCCTCAGACGGCGGCACG +
Preference number: 3 (lower is better)
Translates to: QKSPIIPECSTNVQTAAGGDSLD*PSDGGT
Trigger: CGTGCCGCCGTCTGAGGGCAAGTCTAGACTGTCCCC...TCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGACTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp GCTCAGCCAATGGGTGTGAGGATCCAGAACTGGCAAGTGTTAATACTGGAACTCGGGGACAGTCTAGACTaGCCCTCAGACGGCGGCACG +
Preference number: 3 (lower is better)
Translates to: AQPMGVRIQNWQVLILELGDSLD*PSDGGT
Trigger: CGTGCCGCCGTCTGAGGGCAAGTCTAGACTGTCCCC...GAGTTCCAGTATTAACACTTGCCAGTTCTGGATCCTCACACCCATTGGCTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp CTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCTTAAACAGCAGTATAGACTaGCCCTCAGACAGCGGCATG +
Preference number: 3 (lower is better)
Translates to: LRGLDRLSPEQALARGILNSSID*PSDSGM
Trigger: CATGCCGCTGTCTGAGGGCAAGTCTATACTGCTGTT...TAAGATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp GGAGCTGCAGTAGGAAGCAGTCCTCATGAGGGCTGTTCCCTTCCACTGCTGGAGCAGAGTTACTTGCAGTaGCACTCACAAGTGGGGACC +
Preference number: 3 (lower is better)
Translates to: GAAVGSSPHEGCSLPLLEQSYLQ*HSQVGT
Trigger: GGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCTG...CTCCAGCAGTGGAAGGGAACAGCCCTCATGAGGACTGCTTCCTACTGCAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR GCA 72 bp CTCCTTCTCACTCAGCAGCGTTTCTGTGGGTTCCAGTaGGGGGACCACCTCCTCCACTTCAGTAGGTTCAGT +
Preference number: 3 (lower is better)
Translates to: LLLTQQRFCGFQ*GDHLLHFSRFS
Trigger: ACTGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGAGTGAGAAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR CCA 72 bp ACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTaGCATCTAGTGGGTGGAGCCCACCACACACAGGAC +
Preference number: 3 (lower is better)
Translates to: TFSFVISGRGCH*HLVGGAHHTQD
Trigger: GTCCTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CAA 90 bp AGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTTCAAACAGCAGTATAGACTaGCCCTCAGACAGCGGCATG +
Preference number: 3 (lower is better)
Translates to: SVSVGSSAGTTSSTSVGSNSSID*PSDSGM
Trigger: CATGCCGCTGTCTGAGGGCAAGTCTATACTGCTGTT...TGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp AAGCTTTTCACTTCTTCAGGATCCATTGCAATCTGCTGCCAGGACTCAGGGCCTCTCTGGGGGACTGACTaGTCCAGAGTTGTCGCTGGG +
Preference number: 3 (lower is better)
Translates to: KLFTSSGSIAICCQDSGPLWGTD*SRVVAG
Trigger: CCCAGCGACAACTCTGGACAAGTCAGTCCCCCAGAG...AGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGTGAAAAGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp AGCCTCCTATTTCTTTCTCAGAGCCAGGGCTACCCCGATGGCCACTGCCAGGATCTTCTTCAGGATCCATaGCAATCTGCTGCCAGGACT +
Preference number: 3 (lower is better)
Translates to: SLLFLSQSQGYPDGHCQDLLQDP*QSAART
Trigger: AGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAG...ATCCTGGCAGTGGCCATCGGGGTAGCCCTGGCTCTGAGAAAGAAATAGGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp AGAACAGCACTAGTGCCAAGGCTGAGAAACCCGGTCCTGGAGGGGGTGCTTTACCTTCTTCAGGATCCATaGCAATCTGCTGCCAGGACT +
Preference number: 3 (lower is better)
Translates to: RTALVPRLRNPVLEGVLYLLQDP*QSAART
Trigger: AGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAG...GTAAAGCACCCCCTCCAGGACCGGGTTTCTCAGCCTTGGCACTAGTGCTGTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR GCA 72 bp GCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTaGCATGTTGAGCAGAAGTCCCCAATTATCCCAGAG +
Preference number: 3 (lower is better)
Translates to: APPQALTCLTCH*HVEQKSPIIPE
Trigger: CTCTGGGATAATTGGGGACTTCTGCTCAACATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CAA 90 bp CACTCAGCAGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTCAGAATTAGAGGAGTaGTTCTCACTCTTCTCTCCA +
Preference number: 3 (lower is better)
Translates to: HSAAFLWVPVRGPPPPLQSELEE*FSLFSP
Trigger: TGGAGAGAAGAGTGAGAACAACTCCTCTAATTCTGA...CTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp CGCCCGTGGGATCTTAGCAGGAACCTGGGGGTGAAGAGGAACAGTGCAGTCCCTTCAGAATTAGAGGAGTaGTTCTCACTCTTCTCTCCA +
Preference number: 3 (lower is better)
Translates to: RPWDLSRNLGVKRNSAVPSELEE*FSLFSP
Trigger: TGGAGAGAAGAGTGAGAACAACTCCTCTAATTCTGA...AGGGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGCTAAGATCCCACGGGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR TCA 72 bp AGCAGCTCAGAGATGAACCTGGCTTCGATTGGTGCTTaGATGCGCTCAGCCAATGGGTGTGAGGATCCAGAA +
Preference number: 3 (lower is better)
Translates to: SSSEMNLASIGA*MRSANGCEDPE
Trigger: TTCTGGATCCTCACACCCATTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGGTTCATCTCTGAGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR GCA 72 bp ACACAAGACACATGTGTCTCTCTAGCCAGAGTTACTTaGAGTTGCACTCACAAGTGGGGACCCCAGGTCTCC +
Preference number: 3 (lower is better)
Translates to: TQDTCVSLARVT*SCTHKWGPQVS
Trigger: GGAGACCTGGGGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAGAGAGACACATGTGTCTTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR CCA 72 bp TTGGCAATGTCTAGAGACATTTTCGTTTGTCATCTCTaGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGC +
Preference number: 3 (lower is better)
Translates to: LAMSRDIFVCHL*EGVPLASSGWS
Trigger: GCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCTAGACATTGCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CAA 90 bp AGGACAGCCCCAACACAGAGAATGGTCAGAACAGCACTAGTGCCAAGGCTGAGACATGCCACTGCCATGTaGAGCAGAAGTCCCCAATTA +
Preference number: 3 (lower is better)
Translates to: RTAPTQRMVRTALVPRLRHATAM*SRSPQL
Trigger: TAATTGGGGACTTCTGCTCAACATGGCAGTGGCATG...TCTCAGCCTTGGCACTAGTGCTGTTCTGACCATTCTCTGTGTTGGGGCTGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CAA 90 bp AGAAGTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGAGTGCCCCAGCCACCTaGCTGAATGATGTACTCTGC +
Preference number: 3 (lower is better)
Translates to: RSPQLSQSVPQMSRQLLESAPAT*LNDVLC
Trigger: GCAGAGTACATCATTCAGCAAGGTGGCTGGGGCACT...CTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGACTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399777.1
ENST00000498133.5
3UTR-3UTR CAA 90 bp CTAACAGGTGGGAAAATAAAGCAGCAAGTAGCCGCTTCCATACCACATTTCTTCCTCTGGGGGACTGACTaGTCCAGAGTTGTCGCTGGG +
Preference number: 3 (lower is better)
Translates to: LTGGKIKQQVAASIPHFFLWGTD*SRVVAG
Trigger: CCCAGCGACAACTCTGGACAAGTCAGTCCCCCAGAG...GAAGAAATGTGGTATGGAAGCGGCTACTTGCTGCTTTATTTTCCCACCTGTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337612.9
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp TGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTTCAGGAAGTGCCTCTaGCAGCTCCCGCGCTGGCAA +
Preference number: 3 (lower is better)
Translates to: CWRFKFQPIQLQPYILLSFRKCL*QLPRWQ
Trigger: TTGCCAGCGCGGGAGCTGCAAGAGGCACTTCCTGAA...AGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp GATTCTCAATTTAGCATGAGCGGAGGCCCTTGGGATTTACAGTCAGATGAATGTTTCAGGAAGTGCCTCTaGCAGCTCCCGCGCTGGCAA +
Preference number: 3 (lower is better)
Translates to: DSQFSMSGGPWDLQSDECFRKCL*QLPRWQ
Trigger: TTGCCAGCGCGGGAGCTGCAAGAGGCACTTCCTGAA...ACATTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp GCTCAGCCAATGGGTGTGAGGATCCAGAACTGGCAAGTGTTAATACTGGAACTCCAGAGTTACTTGCAGTaGCACTCACAAGTGGGGACC +
Preference number: 3 (lower is better)
Translates to: AQPMGVRIQNWQVLILELQSYLQ*HSQVGT
Trigger: GGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCTG...GAGTTCCAGTATTAACACTTGCCAGTTCTGGATCCTCACACCCATTGGCTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR TCA 72 bp ATCTTCTGCAGTGATTCCAGGGTATTCCTCCTCCTCTaGCTCAAGACTAAACACAGTGCCCCAGCCACCTTG +
Preference number: 3 (lower is better)
Translates to: IFCSDSRVFLLL*LKTKHSAPATL
Trigger: CAAGGTGGCTGGGGCACTGTGTTTAGTCTTGAGTCAGAGGAGGAGGAATACCCTGGAATCACTGCAGAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399777.1
ENST00000498133.5
3UTR TCA 72 bp ACCAGAGGCACCAAAATCTTATTCCAGCCGCTGGCATaGACTGTGGTCTCCAGTGTACATTCCCGAAATGCC +
Preference number: 3 (lower is better)
Translates to: TRGTKILFQPLA*TVVSSVHSRNA
Trigger: GGCATTTCGGGAATGTACACTGGAGACCACAGTTCATGCCAGCGGCTGGAATAAGATTTTGGTGCCTCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498133.5
3UTR GCA 72 bp TCTAAGCTTTTCACTTCTTCAGGATCCATTGCAATCTaGTGCCAGGACTCAGGGCCTAGTGACACTGGCAGG +
Preference number: 3 (lower is better)
Translates to: SKLFTSSGSIAI*CQDSGPSDTGR
Trigger: CCTGCCAGTGTCACTAGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGTGAAAAGCTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR GCA 72 bp GTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATaGCACTGCCATGTTGAGCAGAAGTCCCCAATTATC +
Preference number: 3 (lower is better)
Translates to: VNAPPQALTCLT*HCHVEQKSPII
Trigger: GATAATTGGGGACTTCTGCTCAACATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR CCA 72 bp TCCTTCACCTTAGACTTAGAGGGTATAAGTTGGAGGTaGAAGGAATGGCCTCCTACTATCAGCTCCTCCCCC +
Preference number: 3 (lower is better)
Translates to: SFTLDLEGISWR*KEWPPTISSSP
Trigger: GGGGGAGGAGCTGATAGTAGGAGGCCATTCCTTCCACCTCCAACTTATACCCTCTAAGTCTAAGGTGAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CAA 90 bp TGGGACACTAAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACACTCTGGGGGACTGACTaGTCCAGAGTTGTCGCTGGG +
Preference number: 3 (lower is better)
Translates to: WDTKTQNKDTLQDKAGKTLWGTD*SRVVAG
Trigger: CCCAGCGACAACTCTGGACAAGTCAGTCCCCCAGAG...TGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTTAGTGTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337612.9
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp CCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGGACTTCTTCAGGATCCATaGCAATCTGCTGCCAGGACT +
Preference number: 3 (lower is better)
Translates to: PHPVNSGADQELPEKANGLLQDP*QSAART
Trigger: AGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAG...TCCATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp CAATGTCTAGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTTCTTCAGGATCCATaGCAATCTGCTGCCAGGACT +
Preference number: 3 (lower is better)
Translates to: QCLETFSFVISGRGCHWHLLQDP*QSAART
Trigger: AGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAG...ATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCTAGACATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp TGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTTCTTCAGGAAGTGCCTCTaGCAGCTCCCGCGCTGGCAA +
Preference number: 3 (lower is better)
Translates to: WRFKFQPIQLQPYILLSFFRKCL*QLPRWQ
Trigger: TTGCCAGCGCGGGAGCTGCAAGAGGCACTTCCTGAA...GAAAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp TGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGCAAGGCTCTCTTCCCTaGCGTTTATCTCCTTCTCAC +
Preference number: 3 (lower is better)
Translates to: CHILLTQELTKSYQRKPMQGSLP*RLSPSH
Trigger: GTGAGAAGGAGATAAACGCAAGGGAAGAGAGCCTTG...CATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp TCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCACATGCCACTGCCATGTaGAGCAGAAGTCCCCAATTA +
Preference number: 3 (lower is better)
Translates to: SPIIPECSTNVQTAAGGSHATAM*SRSPQL
Trigger: TAATTGGGGACTTCTGCTCAACATGGCAGTGGCATG...TGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR TCA 72 bp TCAAGCCCTAACATGCCTAACATGCCACTGCCATGTTaGGCAGAAGTCCCCAATTATCCCAGAGTGTTCCAC +
Preference number: 3 (lower is better)
Translates to: SSPNMPNMPLPC*AEVPNYPRVFH
Trigger: GTGGAACACTCTGGGATAATTGGGGACTTCTGCTCAACATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR GCA 72 bp ATAGTCCTCCAGGTATGTCACGCCAAACTGCAGCAGTaGGCTCAAAGGTTCTTGACCACGTCTTGTCAATTC +
Preference number: 3 (lower is better)
Translates to: IVLQVCHAKLQQ*AQRFLTTSCQF
Trigger: GAATTGACAAGACGTGGTCAAGAACCTTTGAGCGCACTGCTGCAGTTTGGCGTGACATACCTGGAGGACTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498133.5
3UTR CCA 72 bp GTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATaGGTGAACCAGAAGGTCAACAGTTGCATTTCTTCA +
Preference number: 3 (lower is better)
Translates to: VRRGIKNASRGR*VNQKVNSCISS
Trigger: TGAAGAAATGCAACTGTTGACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CAA 90 bp GCTCAGCCAATGGGTGTGAGGATCCAGAACTGGCAAGTGTTAATACTGGAACTCTCTAGCCAGAGTTACTaGCAGTTGCACTCACAAGTG +
Preference number: 3 (lower is better)
Translates to: AQPMGVRIQNWQVLILELSSQSY*QLHSQV
Trigger: CACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAGA...GAGTTCCAGTATTAACACTTGCCAGTTCTGGATCCTCACACCCATTGGCTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR TCA 72 bp GAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTaGACCAGAAGGTCAACAGTTGCATTTCTTCATCTA +
Preference number: 3 (lower is better)
Translates to: EGVSRMPRGGDG*TRRSTVAFLHL
Trigger: TAGATGAAGAAATGCAACTGTTGACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR TCA 72 bp GTCACGCCAAACTGCAGCAGTGCGCTCAAAGGTTCTTaGCCACGTCTTGTCAATTCCAAAAGCATTTGTCGT +
Preference number: 3 (lower is better)
Translates to: VTPNCSSALKGS*PRLVNSKSICR
Trigger: ACGACAAATGCTTTTGGAATTGACAAGACGTGGTCAAGAACCTTTGAGCGCACTGCTGCAGTTTGGCGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498133.5
3UTR-3UTR CAA 90 bp GTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCTTCTTCAGGATCCATaGCAATCTGCTGCCAGGACT +
Preference number: 3 (lower is better)
Translates to: VPQMSRQLLEVQIPANTTLLQDP*QSAART
Trigger: AGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAG...AGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp GTGCAGAGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAACAGCAGTATAGACTaGCCCTCAGACAGCGGCATG +
Preference number: 3 (lower is better)
Translates to: VQSLLIEKDEILRGLRAKNSSID*PSDSGM
Trigger: CATGCCGCTGTCTGAGGGCAAGTCTATACTGCTGTT...CTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCTCTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp TGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTAACAGCAGTATAGACTaGCCCTCAGACAGCGGCATG +
Preference number: 3 (lower is better)
Translates to: CWRFKFQPIQLQPYILLSNSSID*PSDSGM
Trigger: CATGCCGCTGTCTGAGGGCAAGTCTATACTGCTGTT...AGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp CTATCCCAATTCTTCCTAAGTAAACCCTCTCTCGCTAAAGCAGTGGGTCTCAATAACAGCAGTATAGACTaGCCCTCAGACAGCGGCATG +
Preference number: 3 (lower is better)
Translates to: LSQFFLSKPSLAKAVGLNNSSID*PSDSGM
Trigger: CATGCCGCTGTCTGAGGGCAAGTCTATACTGCTGTT...ATTGAGACCCACTGCTTTAGCGAGAGAGGGTTTACTTAGGAAGAATTGGGATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp GATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACCATGCCACTGCCATGTaGAGCAGAAGTCCCCAATTA +
Preference number: 3 (lower is better)
Translates to: DLQSDECECPTSSPNMPNHATAM*SRSPQL
Trigger: TAATTGGGGACTTCTGCTCAACATGGCAGTGGCATG...GTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CAA 90 bp GGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTCTGATTAGGACTATTTaGGTTTATTACCCTGGCATT +
Preference number: 3 (lower is better)
Translates to: GEKGYQECLEGEMGEPEGLIRTI*VYYPGI
Trigger: AATGCCAGGGTAATAAACCAAAATAGTCCTAATCAG...ACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CAA 90 bp ATCATGATAGTAGGCTATAACTCAAGTTTCAATGCCACGATGGTCGTGCTTTCTTCCCAGCCTGTGCTCTaGGCTATTCAGGACCTGAGG +
Preference number: 3 (lower is better)
Translates to: IMIVGYNSSFNATMVVLSSQPVL*AIQDLR
Trigger: CCTCAGGTCCTGAATAGCCAAGAGCACAGGCTGGGA...AGAAAGCACGACCATCGTGGCATTGAAACTTGAGTTATAGCCTACTATCATGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493680.5
3UTR-3UTR CAA 90 bp AGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTCAGAATTAGAGGAGTaGTTCTCACTCTTCTCTCCA +
Preference number: 3 (lower is better)
Translates to: SQMNVNAPPQALTCLTCHSELEE*FSLFSP
Trigger: TGGAGAGAAGAGTGAGAACAACTCCTCTAATTCTGA...GTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp AGAAGTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGTCAGAATTAGAGGAGTaGTTCTCACTCTTCTCTCCA +
Preference number: 3 (lower is better)
Translates to: RSPQLSQSVPQMSRQLLESELEE*FSLFSP
Trigger: TGGAGAGAAGAGTGAGAACAACTCCTCTAATTCTGA...CTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGACTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp CAATGTCTAGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATTCAGAATTAGAGGAGTaGTTCTCACTCTTCTCTCCA +
Preference number: 3 (lower is better)
Translates to: QCLETFSFVISGRGCHWHSELEE*FSLFSP
Trigger: TGGAGAGAAGAGTGAGAACAACTCCTCTAATTCTGA...ATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCTAGACATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp GAAATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCTGATTAGGACTATTTaGGTTTATTACCCTGGCATT +
Preference number: 3 (lower is better)
Translates to: EMQVRRGIKNASRGRWVNLIRTI*VYYPGI
Trigger: AATGCCAGGGTAATAAACCAAAATAGTCCTAATCAG...GTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR TCA 72 bp AGGGGGTGCTTTACCCCTAAGATTCTCAATTTAGCATaGGCGGAGGCCCTTGGGATTTACAGTCAGATGAAT +
Preference number: 3 (lower is better)
Translates to: RGCFTPKILNLA*AEALGIYSQMN
Trigger: ATTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAATCTTAGGGGTAAAGCACCCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR CCA 72 bp TATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTaGAGGTTCAAATTCCAGCCAATACAACTCCAACCT +
Preference number: 3 (lower is better)
Translates to: YPRVFHKCPDSC*RFKFQPIQLQP
Trigger: AGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CAA 90 bp TGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGCAGCTTCTTCAGGATCCATaGCAATCTGCTGCCAGGACT +
Preference number: 3 (lower is better)
Translates to: CTYFEDSQRQHFYKVELQLLQDP*QSAART
Trigger: AGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAG...CTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp CTAACAGGTGGGAAAATAAAGCAGCAAGTAGCCGCTTCCATACCACATTTCTTCTCTAGCCAGAGTTACTaGCAGTTGCACTCACAAGTG +
Preference number: 3 (lower is better)
Translates to: LTGGKIKQQVAASIPHFFSSQSY*QLHSQV
Trigger: CACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAGA...GAAGAAATGTGGTATGGAAGCGGCTACTTGCTGCTTTATTTTCCCACCTGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CAA 90 bp TTTCTCTGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGTGCCCCAGCCACCTaGCTGAATGATGTACTCTGC +
Preference number: 3 (lower is better)
Translates to: FLCVHISKIPKGSIFTRWSAPAT*LNDVLC
Trigger: GCAGAGTACATCATTCAGCAAGGTGGCTGGGGCACT...CCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACAGAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399777.1
ENST00000498133.5
3UTR GCA 72 bp GACCACCTCCTCCACTTCAGTAGGTTCAGTTGTTGCTaGTTTCACCTCTTCTTCATCAAGTTCTACAAACAG +
Preference number: 3 (lower is better)
Translates to: DHLLHFSRFSCC*FHLFFIKFYKQ
Trigger: CTGTTTGTAGAACTTGATGAAGAAGAGGTGAAAGCAGCAACAACTGAACCTACTGAAGTGGAGGAGGTGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR CCA 72 bp AATCTTTCCTTCACCTTAGACTTAGAGGGTATAAGTTaGAGGTGGAAGGAATGGCCTCCTACTATCAGCTCC +
Preference number: 3 (lower is better)
Translates to: NLSFTLDLEGIS*RWKEWPPTISS
Trigger: GGAGCTGATAGTAGGAGGCCATTCCTTCCACCTCCAACTTATACCCTCTAAGTCTAAGGTGAAGGAAAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CAA 90 bp AGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCACAAGGCTCTCTTCCCTaGCGTTTATCTCCTTCTCAC +
Preference number: 3 (lower is better)
Translates to: SLLIEKDEILRGLRAKKSQGSLP*RLSPSH
Trigger: GTGAGAAGGAGATAAACGCAAGGGAAGAGAGCCTTG...TGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR GCA 72 bp AATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTaGTGGAGGTTCAAATTCCAGCCAATACAACTCCAA +
Preference number: 3 (lower is better)
Translates to: NYPRVFHKCPDS*WRFKFQPIQLQ
Trigger: TTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR CCA 72 bp GAATGCGCTCAGCCAATGGGTGTGAGGATCCAGAACTaGCAAGTGTTAATACTGGAACTCATAGGATTTATT +
Preference number: 3 (lower is better)
Translates to: ECAQPMGVRIQN*QVLILELIGFI
Trigger: AATAAATCCTATGAGTTCCAGTATTAACACTTGCCAGTTCTGGATCCTCACACCCATTGGCTGAGCGCATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CAA 90 bp AAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACACACAAACATCATGCCACTGCCATGTaGAGCAGAAGTCCCCAATTA +
Preference number: 3 (lower is better)
Translates to: KTQNKDTLQDKAGKTHKHHATAM*SRSPQL
Trigger: TAATTGGGGACTTCTGCTCAACATGGCAGTGGCATG...ATGTTTGTGTGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CAA 90 bp GTGTCTGTTAGCAATCAGATAGCCTACAAGGCCGTCTTGATGGGTATGATCACCCTGATTAGGACTATTTaGGTTTATTACCCTGGCATT +
Preference number: 3 (lower is better)
Translates to: VSVSNQIAYKAVLMGMITLIRTI*VYYPGI
Trigger: AATGCCAGGGTAATAAACCAAAATAGTCCTAATCAG...GGTGATCATACCCATCAAGACGGCCTTGTAGGCTATCTGATTGCTAACAGACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CAA 90 bp GATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACGTTCTTGACCACGTCTaGTCAATTCCAAAAGCATTT +
Preference number: 3 (lower is better)
Translates to: DLQSDECECPTSSPNMPNVLDHV*SIPKAF
Trigger: AAATGCTTTTGGAATTGACAAGACGTGGTCAAGAAC...GTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498133.5
3UTR GCA 72 bp TCTCATACCTTTCAGGAGAAAGGCAAGGAGACTACTTaGCTTACTGTCATATTATTGAGGGAATCAGCGCAA +
Preference number: 3 (lower is better)
Translates to: SHTFQEKGKETT*LTVILLRESAQ
Trigger: TTGCGCTGATTCCCTCAATAATATGACAGTAAGGCAAGTAGTCTCCTTGCCTTTCTCCTGAAAGGTATGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CAA 90 bp GTGGAGGAATGTCTAACAGGTGGGAAAATAAAGCAGCAAGTAGCCGCTTCCATACTGATTAGGACTATTTaGGTTTATTACCCTGGCATT +
Preference number: 3 (lower is better)
Translates to: VEECLTGGKIKQQVAASILIRTI*VYYPGI
Trigger: AATGCCAGGGTAATAAACCAAAATAGTCCTAATCAG...TATGGAAGCGGCTACTTGCTGCTTTATTTTCCCACCTGTTAGACATTCCTCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR CCA 72 bp AAAACACTATCTAGTTCCATTACCGTGAAATACAACTaGCCAAATCACTGTGGAGGAATGTCTAACAGGTGG +
Preference number: 3 (lower is better)
Translates to: KTLSSSITVKYN*PNHCGGMSNRW
Trigger: CCACCTGTTAGACATTCCTCCACAGTGATTTGGCCAGTTGTATTTCACGGTAATGGAACTAGATAGTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR TCA 72 bp GAAGAGGAAACATTATTCTGGTATCCAGTATGTCGCTaGGATGTTAAACGAGATAATGCTTGTGTGGGAATT +
Preference number: 3 (lower is better)
Translates to: EEETLFWYPVCR*DVKRDNACVGI
Trigger: AATTCCCACACAAGCATTATCTCGTTTAACATCTCAGCGACATACTGGATACCAGAATAATGTTTCCTCTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR TCA 72 bp GAAAGAAAATTATGCCGATGCTCAACTAGCATATACTaGTTAGGACTATTTTGGTTTATTACCCTGGCATTG +
Preference number: 3 (lower is better)
Translates to: ERKLCRCSTSIY*LGLFWFITLAL
Trigger: CAATGCCAGGGTAATAAACCAAAATAGTCCTAATCAGTATATGCTAGTTGAGCATCGGCATAATTTTCTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GCCCTCAGACAGCGGCATGGGCTTCATCTCACCGGCGGGGGACAGTCTAGACTTCGCCATGTTGGAGGGTaGGGTCACCCCGGCGTGCCT +
Preference number: 4 (lower is better)
Translates to: ALRQRHGLHLTGGGQSRLRHVGG*GHPGVP
Trigger: AGGCACGCCGGGGTGACCTCACCCTCCAACATGGCG...AAGTCTAGACTGTCCCCCGCCGGTGAGATGAAGCCCATGCCGCTGTCTGAGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337612.9
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp AAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCGAGGTCACCCCGGCGTaGCTTCGTCACGGCCGGCGT +
Preference number: 4 (lower is better)
Translates to: KLRGLDRLSPEQALARGIEVTPA*LRHGRR
Trigger: ACGCCGGCCGTGACGAAGGCACGCCGGGGTGACCTC...GATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CGCCCGTGGGATCTTAGCAGGAACCTGGGGGTGAAGAGGAACAGTGCAGTCCCTGAGGTCACCCCGGCGTaGCTTCGTCACGGCCGGCGT +
Preference number: 4 (lower is better)
Translates to: RPWDLSRNLGVKRNSAVPEVTPA*LRHGRR
Trigger: ACGCCGGCCGTGACGAAGGCACGCCGGGGTGACCTC...AGGGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGCTAAGATCCCACGGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR CAA 72 bp ATGGGCTTCATCTCACCGGCGGGGGACAGTCTAGACTaGCCCTCAGACGGCGGCACGGGCTTCTTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: MGFISPAGDSLD*PSDGGTGFFSL
Trigger: CAGCGAGAAGAAGCCCGTGCCGCCGTCTGAGGGCAAGTCTAGACTGTCCCCCGCCGGTGAGATGAAGCCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp AGGTGGAGCTGCAGGAAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCGCCATGTTGGAGGGTaGGGTCACCCCGGCGTGCCT +
Preference number: 4 (lower is better)
Translates to: RWSCRKLRGLDRLSPEQARHVGG*GHPGVP
Trigger: AGGCACGCCGGGGTGACCTCACCCTCCAACATGGCG...GGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTCCTGCAGCTCCACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGGACAGCCCCAACTCAGGAAGTGCCTCTTaGAGCTCCCGCGCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: GCHWHLVGGAHHTQDSPNSGSAS*SSRAGK
Trigger: CTTGCCAGCGCGGGAGCTGCAAGAGGCACTTCCTGA...GTTGGGGCTGTCCTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GCCCTCAGACAGCGGCATGGGCTTCATCTCACCGGCGGGGGACAGTCTAGACTTTGGGGCTTCAGGAAGTaGCTCTTGCAGCTCCCGCGC +
Preference number: 4 (lower is better)
Translates to: ALRQRHGLHLTGGGQSRLWGFRK*LLQLPR
Trigger: GCGCGGGAGCTGCAAGAGGCACTTCCTGAAGCCCCA...AAGTCTAGACTGTCCCCCGCCGGTGAGATGAAGCCCATGCCGCTGTCTGAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGCCTCAGACAGCGGCATaGGCTTCATCTCACCGGCGG +
Preference number: 4 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQPQTAA*ASSHRR
Trigger: CCGCCGGTGAGATGAAGCCCATGCCGCTGTCTGAGG...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GCCCTCAGACAGCGGCATGGGCTTCATCTCACCGGCGGGGGACAGTCTAGACTTCCTCAGACAGCGGCATaGGCTTCATCTCACCGGCGG +
Preference number: 4 (lower is better)
Translates to: ALRQRHGLHLTGGGQSRLPQTAA*ASSHRR
Trigger: CCGCCGGTGAGATGAAGCCCATGCCGCTGTCTGAGG...AAGTCTAGACTGTCCCCCGCCGGTGAGATGAAGCCCATGCCGCTGTCTGAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp GCCCTCAGACAGCGGCATGGGCTTCATCTCACCGGCGGGGGACAGTCTAGACTTCCAGGGCTACCCCGATaGCCACTGCCAGGATGGCAA +
Preference number: 4 (lower is better)
Translates to: ALRQRHGLHLTGGGQSRLPGLPR*PLPGWQ
Trigger: TTGCCATCCTGGCAGTGGCCATCGGGGTAGCCCTGG...AAGTCTAGACTGTCCCCCGCCGGTGAGATGAAGCCCATGCCGCTGTCTGAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp GGAGCTGCAGTAGGAAGCAGTCCTCATGAGGGCTGTTCCCTTCCACTGCTGGAGTCCCTGAGAGGCAGCTaGGAGTACGGGCGAGCACCC +
Preference number: 4 (lower is better)
Translates to: GAAVGSSPHEGCSLPLLESLRGS*EYGRAP
Trigger: GGGTGCTCGCCCGTACTCTCAGCTGCCTCTCAGGGA...CTCCAGCAGTGGAAGGGAACAGCCCTCATGAGGACTGCTTCCTACTGCAGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTTCAGTTGTTGGCGGCGGCGGCAGTTaGTTCCGACAGGGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: SVGSSAGTTSSTSVGSVVGGGGS*FRQGPP
Trigger: TGGGGGACCCTGTCGGAAGCAACTGCCGCCGCCGCC...AACAACTGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp GCCCTCAGACAGCGGCATGGGCTTCATCTCACCGGCGGGGGACAGTCTAGACTTTACCCCGATGGCCACTaGCAGGATGGCAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: ALRQRHGLHLTGGGQSRLYPDGH*QDGNSS
Trigger: GCTGCTGTTGCCATCCTGGCAGTGGCCATCGGGGTA...AAGTCTAGACTGTCCCCCGCCGGTGAGATGAAGCCCATGCCGCTGTCTGAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGTACCCCGATGGCCACTaGCAGGATGGCAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQYPDGH*QDGNSS
Trigger: GCTGCTGTTGCCATCCTGGCAGTGGCCATCGGGGTA...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGGACAGCCCCAACGGTGGCAGTGATATGTaGAAGCAAGGGAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GCHWHLVGGAHHTQDSPNGGSDM*KQGSWG
Trigger: GCCCCAGCTCCCTTGCTTCCACATATCACTGCCACC...GTTGGGGCTGTCCTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGCGGGCTTCTTCTCGCTaGCAGGGGACAGCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQRASSR*QGTALP
Trigger: TGGAAGAGCTGTCCCCTGCCAGCGAGAAGAAGCCCG...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CTCCTTCTCACTCAGCAGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCCTCAGACAGCGGCATaGGCTTCATCTCACCGGCGG +
Preference number: 4 (lower is better)
Translates to: LLLTQQRFCGFQCGDHLLPQTAA*ASSHRR
Trigger: CCGCCGGTGAGATGAAGCCCATGCCGCTGTCTGAGG...GAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGAGTGAGAAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGGCAAGCCCTCGCCCGTaGGATCTTAGCAGGAACCTG +
Preference number: 4 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQASPRP*DLSRNL
Trigger: CAGGTTCCTGCTAAGATCCCACGGGCGAGGGCTTGC...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CTCTCTAGCCAGAGTTACTTGCAGTTGCACTCACAAGTGGGGACCCCAGGTCTCCCGCCGCCGCCATGTTaGAGGGTGAGGTCACCCCGG +
Preference number: 4 (lower is better)
Translates to: LSSQSYLQLHSQVGTPGLPPPPC*RVRSPR
Trigger: CCGGGGTGACCTCACCCTCCAACATGGCGGCGGCGG...GAGACCTGGGGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000337612.9
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGGAAGCTATATCTAGTTaGACCCCTGGCCCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQEAISS*TPGPGP
Trigger: GGGGCCAGGGCCAGGGGTTCAACTAGATATAGCTTC...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611738.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGGGCGGCGGCGGCAGTTaGTTCCGACAGGGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: RDIFVCHLWEGVPLASSGGGGGS*FRQGPP
Trigger: TGGGGGACCCTGTCGGAAGCAACTGCCGCCGCCGCC...CCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 10 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CGCCCGTGGGATCTTAGCAGGAACCTGGGGGTGAAGAGGAACAGTGCAGTCCCTTCAGGAAGTGCCTCTTaGAGCTCCCGCGCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: RPWDLSRNLGVKRNSAVPSGSAS*SSRAGK
Trigger: CTTGCCAGCGCGGGAGCTGCAAGAGGCACTTCCTGA...AGGGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGCTAAGATCCCACGGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CTCAGAGATGAACCTGGCTTCGATTGGTGCTTGAATGCGCTCAGCCAATGGGTGGAGGTCACCCCGGCGTaGCTTCGTCACGGCCGGCGT +
Preference number: 4 (lower is better)
Translates to: LRDEPGFDWCLNALSQWVEVTPA*LRHGRR
Trigger: ACGCCGGCCGTGACGAAGGCACGCCGGGGTGACCTC...CACCCATTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGGTTCATCTCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CGCCCGTGGGATCTTAGCAGGAACCTGGGGGTGAAGAGGAACAGTGCAGTCCCTTTGCAGCTCCCGCGCTaGCAAGACCACAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: RPWDLSRNLGVKRNSAVPLQLPR*QDHRSH
Trigger: GTGGCTTCTGTGGTCTTGCCAGCGCGGGAGCTGCAA...AGGGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGCTAAGATCCCACGGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGTCAGCAGCGTTTCTGTaGGTTCCAGTGCGGGGACCA +
Preference number: 4 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQSAAFL*VPVRGP
Trigger: TGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGA...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GAAATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCCGCCGCCGCCATGTTaGAGGGTGAGGTCACCCCGG +
Preference number: 4 (lower is better)
Translates to: EMQVRRGIKNASRGRWVNPPPPC*RVRSPR
Trigger: CCGGGGTGACCTCACCCTCCAACATGGCGGCGGCGG...GTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTCAACCCGCCGCCGCCATGTTaGAGGGTGAGGTCACCCCGG +
Preference number: 4 (lower is better)
Translates to: RRGIKNASRGRWVNQKVNPPPPC*RVRSPR
Trigger: CCGGGGTGACCTCACCCTCCAACATGGCGGCGGCGG...GTTGACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGCCCCAGCCACCTTGCTaGATGATGTACTCTGCCGAA +
Preference number: 4 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQPQPPC*MMYSAE
Trigger: TTCGGCAGAGTACATCATTCAGCAAGGTGGCTGGGG...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000618481.4
CDS-3UTR TCA 90 bp AAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCGAGACTCTGGGGGACTaGCTTGTCCAGAGTTGTCGC +
Preference number: 4 (lower is better)
Translates to: KLRGLDRLSPEQALARGIETLGD*LVQSCR
Trigger: GCGACAACTCTGGACAAGTCAGTCCCCCAGAGTCTC...GATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCGAACAGTGCAGTCCCTaGGAGGCAGCTGAGAGTACG +
Preference number: 4 (lower is better)
Translates to: KLRGLDRLSPEQALARGIEQCSP*EAAEST
Trigger: CGTACTCTCAGCTGCCTCTCAGGGACTGCACTGTTC...GATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGGAAGCTTCGGGGACTTaGCAGACTGAGTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQEASGT*QTESRA
Trigger: TGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTC...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CTCAGAGATGAACCTGGCTTCGATTGGTGCTTGAATGCGCTCAGCCAATGGGTGCGCCATGTTGGAGGGTaGGGTCACCCCGGCGTGCCT +
Preference number: 4 (lower is better)
Translates to: LRDEPGFDWCLNALSQWVRHVGG*GHPGVP
Trigger: AGGCACGCCGGGGTGACCTCACCCTCCAACATGGCG...CACCCATTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGGTTCATCTCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGCGCCATGTTGGAGGGTaGGGTCACCCCGGCGTGCCT +
Preference number: 4 (lower is better)
Translates to: RDIFVCHLWEGVPLASSGRHVGG*GHPGVP
Trigger: AGGCACGCCGGGGTGACCTCACCCTCCAACATGGCG...CCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GGCACAGTGGTGGGCACCTATAGTCCCAGCCTGTGCTCTTGGCTATTCAGGACCCCTGCCTTGGCCTCCTaGGTAGCTGGGATTACAGGC +
Preference number: 4 (lower is better)
Translates to: GTVVGTYSPSLCSWLFRTPALAS*VAGITG
Trigger: GCCTGTAATCCCAGCTACTCAGGAGGCCAAGGCAGG...GGTCCTGAATAGCCAAGAGCACAGGCTGGGACTATAGGTGCCCACCACTGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS-3UTR GCA 90 bp AGGTGGAGCTGCAGGAAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCCTGGCCCTGGCCCCTaGCCCAGAAGAGATGAAAGA +
Preference number: 4 (lower is better)
Translates to: RWSCRKLRGLDRLSPEQAPGPGP*PRRDER
Trigger: TCTTTCATCTCTTCTGGGGCAGGGGCCAGGGCCAGG...GGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTCCTGCAGCTCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GGAGCTGCAGTAGGAAGCAGTCCTCATGAGGGCTGTTCCCTTCCACTGCTGGAGCCTGGCCCTGGCCCCTaGCCCAGAAGAGATGAAAGA +
Preference number: 4 (lower is better)
Translates to: GAAVGSSPHEGCSLPLLEPGPGP*PRRDER
Trigger: TCTTTCATCTCTTCTGGGGCAGGGGCCAGGGCCAGG...CTCCAGCAGTGGAAGGGAACAGCCCTCATGAGGACTGCTTCCTACTGCAGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GGCACAGTGGTGGGCACCTATAGTCCCAGCCTGTGCTCTTGGCTATTCAGGACCCCTGGCCCTGGCCCCTaGCCCAGAAGAGATGAAAGA +
Preference number: 4 (lower is better)
Translates to: GTVVGTYSPSLCSWLFRTPGPGP*PRRDER
Trigger: TCTTTCATCTCTTCTGGGGCAGGGGCCAGGGCCAGG...GGTCCTGAATAGCCAAGAGCACAGGCTGGGACTATAGGTGCCCACCACTGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS-3UTR GCA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGGGATCCATTGCAATCTaGTGCCAGGACTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQGSIAI*CQDSGP
Trigger: AGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCC...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CAGCAGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGCAGCAGCCTCTTCCATaGCCTCGGGCACCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: QQRFCGFQCGDHLLHFSRQQPLP*PRAPLL
Trigger: AAGAAGAGGTGCCCGAGGGCATGGAAGAGGCTGCTG...CCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp CTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCTTATTCTGTGGGTTCCAGTaGGGGGACCACCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: LRGLDRLSPEQALARGILFCGFQ*GDHLLH
Trigger: GTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAA...TAAGATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GGAGCTGCAGTAGGAAGCAGTCCTCATGAGGGCTGTTCCCTTCCACTGCTGGAGTTCTGTGGGTTCCAGTaGGGGGACCACCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: GAAVGSSPHEGCSLPLLEFCGFQ*GDHLLH
Trigger: GTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAA...CTCCAGCAGTGGAAGGGAACAGCCCTCATGAGGACTGCTTCCTACTGCAGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGGACAGCCCCAACCCTGGCTTCGATTGGTaGTTGAATGCGCTCAGCCAA +
Preference number: 4 (lower is better)
Translates to: GCHWHLVGGAHHTQDSPNPGFDW*LNALSQ
Trigger: TTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGG...GTTGGGGCTGTCCTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGGACAGCCCCAACCAGACTGCCAGGAAGTaGTCACAGTTGGAGACTCTG +
Preference number: 4 (lower is better)
Translates to: GCHWHLVGGAHHTQDSPNQTARK*SQLETL
Trigger: CAGAGTCTCCAACTGTGACCACTTCCTGGCAGTCTG...GTTGGGGCTGTCCTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CACTCAGCAGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTCAGCAGCGTTTCTGTaGGTTCCAGTGCGGGGACCA +
Preference number: 4 (lower is better)
Translates to: HSAAFLWVPVRGPPPPLQSAAFL*VPVRGP
Trigger: TGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGA...CTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp GGCACAGTGGTGGGCACCTATAGTCCCAGCCTGTGCTCTTGGCTATTCAGGACCAGCACGGCACAGTGGTaGGCACCTATAGTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: GTVVGTYSPSLCSWLFRTSTAQW*APIVPA
Trigger: GGCTGGGACTATAGGTGCCCACCACTGTGCCGTGCT...GGTCCTGAATAGCCAAGAGCACAGGCTGGGACTATAGGTGCCCACCACTGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS-3UTR TCA 90 bp GGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGGACAGCCCCAACTTGAACCCCTTGGGGTaGGGAAAGATGTTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: GCHWHLVGGAHHTQDSPNLNPLG*GKMLLL
Trigger: CAAGAGCAACATCTTTCCTCACCCCAAGGGGTTCAA...GTTGGGGCTGTCCTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000498133.5
ENST00000543133.5
ENST00000616863.4
CDS-3UTR TCA 90 bp CGCCCGTGGGATCTTAGCAGGAACCTGGGGGTGAAGAGGAACAGTGCAGTCCCTCCCCAGCCACCTTGCTaGATGATGTACTCTGCCGAA +
Preference number: 4 (lower is better)
Translates to: RPWDLSRNLGVKRNSAVPPQPPC*MMYSAE
Trigger: TTCGGCAGAGTACATCATTCAGCAAGGTGGCTGGGG...AGGGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGCTAAGATCCCACGGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000618481.4
CDS-3UTR TCA 90 bp GGAGCTGCAGTAGGAAGCAGTCCTCATGAGGGCTGTTCCCTTCCACTGCTGGAGGAGACTCTGGGGGACTaGCTTGTCCAGAGTTGTCGC +
Preference number: 4 (lower is better)
Translates to: GAAVGSSPHEGCSLPLLEETLGD*LVQSCR
Trigger: GCGACAACTCTGGACAAGTCAGTCCCCCAGAGTCTC...CTCCAGCAGTGGAAGGGAACAGCCCTCATGAGGACTGCTTCCTACTGCAGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCTTAGAGACTCTGGGGGACTaGCTTGTCCAGAGTTGTCGC +
Preference number: 4 (lower is better)
Translates to: LRGLDRLSPEQALARGILETLGD*LVQSCR
Trigger: GCGACAACTCTGGACAAGTCAGTCCCCCAGAGTCTC...TAAGATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CAGGGATGCTGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGATCCCTGAGAGGCAGCTaGGAGTACGGGCGAGCACCC +
Preference number: 4 (lower is better)
Translates to: QGCCHILLTQELTKSYQRSLRGS*EYGRAP
Trigger: GGGTGCTCGCCCGTACTCTCAGCTGCCTCTCAGGGA...TCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCAGCATCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CGCCCGTGGGATCTTAGCAGGAACCTGGGGGTGAAGAGGAACAGTGCAGTCCCTGAAGCTTCGGGGACTTaGCAGACTGAGTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: RPWDLSRNLGVKRNSAVPEASGT*QTESRA
Trigger: TGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTC...AGGGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGCTAAGATCCCACGGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGTCAGCAGCTCAGAGATaGACCTGGCTTCGATTGGTG +
Preference number: 4 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQSAAQR*TWLRLV
Trigger: CACCAATCGAAGCCAGGTTCATCTCTGAGCTGCTGA...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCCGAGGGGGAGATGGGTaGACCAGAAGGTCAACAGTT +
Preference number: 4 (lower is better)
Translates to: KLRGLDRLSPEQALARGIRGGDG*TRRSTV
Trigger: AACTGTTGACCTTCTGGTTCACCCATCTCCCCCTCG...GATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGGGCGGCGGCGGCAGTTaGTTCCGACAGGGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: CHILLTQELTKSYQRKPMGGGGS*FRQGPP
Trigger: TGGGGGACCCTGTCGGAAGCAACTGCCGCCGCCGCC...CATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTTCAGTTGTTGCTGCTCCTGGCCCTGGCCCCTaGCCCAGAAGAGATGAAAGA +
Preference number: 4 (lower is better)
Translates to: GSSAGTTSSTSVGSVVAAPGPGP*PRRDER
Trigger: TCTTTCATCTCTTCTGGGGCAGGGGCCAGGGCCAGG...AGCAGCAACAACTGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp AAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCGGCAGGCTTTCTGTGTaGCAACTCTGGCTAGCTGAC +
Preference number: 4 (lower is better)
Translates to: KLRGLDRLSPEQALARGIGRLSV*QLWLAD
Trigger: GTCAGCTAGCCAGAGTTGGCACACAGAAAGCCTGCC...GATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AGGTGGAGCTGCAGGAAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCAGCAGCCTCTTCCATaGCCTCGGGCACCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: RWSCRKLRGLDRLSPEQAQQPLP*PRAPLL
Trigger: AAGAAGAGGTGCCCGAGGGCATGGAAGAGGCTGCTG...GGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTCCTGCAGCTCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AACAGCACTAGTGCCAAGGCTGAGAAACCCGGTCCTGGAGGGGGTGCTTTACCCCAGCAGCCTCTTCCATaGCCTCGGGCACCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: NSTSAKAEKPGPGGGALPQQPLP*PRAPLL
Trigger: AAGAAGAGGTGCCCGAGGGCATGGAAGAGGCTGCTG...GGGTAAAGCACCCCCTCCAGGACCGGGTTTCTCAGCCTTGGCACTAGTGCTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CTCTCTAGCCAGAGTTACTTGCAGTTGCACTCACAAGTGGGGACCCCAGGTCTCTGGGGCTTCAGGAAGTaGCTCTTGCAGCTCCCGCGC +
Preference number: 4 (lower is better)
Translates to: LSSQSYLQLHSQVGTPGLWGFRK*LLQLPR
Trigger: GCGCGGGAGCTGCAAGAGGCACTTCCTGAAGCCCCA...GAGACCTGGGGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AGCCTCCTATTTCTTTCTCAGAGCCAGGGCTACCCCGATGGCCACTGCCAGGATTACCCCGATGGCCACTaGCAGGATGGCAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: SLLFLSQSQGYPDGHCQDYPDGH*QDGNSS
Trigger: GCTGCTGTTGCCATCCTGGCAGTGGCCATCGGGGTA...ATCCTGGCAGTGGCCATCGGGGTAGCCCTGGCTCTGAGAAAGAAATAGGAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp GCCCTCAGACAGCGGCATGGGCTTCATCTCACCGGCGGGGGACAGTCTAGACTTAAGGGGTATCAAGAATaGCTCGAGGGGGAGATGGGT +
Preference number: 4 (lower is better)
Translates to: ALRQRHGLHLTGGGQSRLKGYQE*LEGEMG
Trigger: ACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTT...AAGTCTAGACTGTCCCCCGCCGGTGAGATGAAGCCCATGCCGCTGTCTGAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp CGCCCGTGGGATCTTAGCAGGAACCTGGGGGTGAAGAGGAACAGTGCAGTCCCTGGAAGTGGTCACAGTTaGAGACTCTGGGGGACTGAC +
Preference number: 4 (lower is better)
Translates to: RPWDLSRNLGVKRNSAVPGSGHS*RLWGTD
Trigger: GTCAGTCCCCCAGAGTCTCCAACTGTGACCACTTCC...AGGGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGCTAAGATCCCACGGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GGAGCTGCAGTAGGAAGCAGTCCTCATGAGGGCTGTTCCCTTCCACTGCTGGAGGGTGGCAGTGATATGTaGAAGCAAGGGAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GAAVGSSPHEGCSLPLLEGGSDM*KQGSWG
Trigger: GCCCCAGCTCCCTTGCTTCCACATATCACTGCCACC...CTCCAGCAGTGGAAGGGAACAGCCCTCATGAGGACTGCTTCCTACTGCAGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTCCTCAGACAGCGGCATaGGCTTCATCTCACCGGCGG +
Preference number: 4 (lower is better)
Translates to: GEKGYQECLEGEMGEPEGPQTAA*ASSHRR
Trigger: CCGCCGGTGAGATGAAGCCCATGCCGCTGTCTGAGG...ACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CTCTCTAGCCAGAGTTACTTGCAGTTGCACTCACAAGTGGGGACCCCAGGTCTCCCTCAGACAGCGGCATaGGCTTCATCTCACCGGCGG +
Preference number: 4 (lower is better)
Translates to: LSSQSYLQLHSQVGTPGLPQTAA*ASSHRR
Trigger: CCGCCGGTGAGATGAAGCCCATGCCGCTGTCTGAGG...GAGACCTGGGGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CAGGATGGCAACAGCAGCAGCCCCTCCAAACAGCAGTATAGACTTGCCCTCAGACCAGGGCTACCCCGATaGCCACTGCCAGGATGGCAA +
Preference number: 4 (lower is better)
Translates to: QDGNSSSPSKQQYRLALRPGLPR*PLPGWQ
Trigger: TTGCCATCCTGGCAGTGGCCATCGGGGTAGCCCTGG...TCTGAGGGCAAGTCTATACTGCTGTTTGGAGGGGCTGCTGCTGTTGCCATCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp TCCATTGCAATCTGCTGCCAGGACTCAGGGCCTAGTGACACTGGCAGGCTTTCTCCAGGGCTACCCCGATaGCCACTGCCAGGATGGCAA +
Preference number: 4 (lower is better)
Translates to: SIAICCQDSGPSDTGRLSPGLPR*PLPGWQ
Trigger: TTGCCATCCTGGCAGTGGCCATCGGGGTAGCCCTGG...AGAAAGCCTGCCAGTGTCACTAGGCCCTGAGTCCTGGCAGCAGATTGCAATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp CACTCAGCAGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGAGTTGCACTCACAAGTaGGGACCCCAGGTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: HSAAFLWVPVRGPPPPLQSCTHK*GPQVSF
Trigger: GAAGGAGACCTGGGGTCCCCACTTGTGAGTGCAACT...CTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGTGGAGGTGGAAGGAATaGCCTCCTACTATCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQWRWKE*PPTISS
Trigger: GGAGCTGATAGTAGGAGGCCATTCCTTCCACCTCCA...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGGACAGCCCCAACGCTTGTGTGGGAATTTaGGCAGAAGCTCTAGGTCGT +
Preference number: 4 (lower is better)
Translates to: GCHWHLVGGAHHTQDSPNACVGI*AEALGR
Trigger: ACGACCTAGAGCTTCTGCCCAAATTCCCACACAAGC...GTTGGGGCTGTCCTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp TCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCACCGCCGCCGCCATGTTaGAGGGTGAGGTCACCCCGG +
Preference number: 4 (lower is better)
Translates to: SPIIPECSTNVQTAAGGSPPPPC*RVRSPR
Trigger: CCGGGGTGACCTCACCCTCCAACATGGCGGCGGCGG...TGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000337612.9
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCAACACTGGAGAAGTGTaGCGGTCAAAGCCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: KLRGLDRLSPEQALARGINTGEV*RSKPVL
Trigger: CAGCACAGGCTTTGACCGTCACACTTCTCCAGTGTT...GATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GGCACAGTGGTGGGCACCTATAGTCCCAGCCTGTGCTCTTGGCTATTCAGGACCCTGGATTGGCAGGGCTaGACACTGGAGAAGTGTGAC +
Preference number: 4 (lower is better)
Translates to: GTVVGTYSPSLCSWLFRTLDWQG*TLEKCD
Trigger: GTCACACTTCTCCAGTGTTCAGCCCTGCCAATCCAG...GGTCCTGAATAGCCAAGAGCACAGGCTGGGACTATAGGTGCCCACCACTGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS-3UTR TCA 90 bp AGAACAGCACTAGTGCCAAGGCTGAGAAACCCGGTCCTGGAGGGGGTGCTTTACGAGACTCTGGGGGACTaGCTTGTCCAGAGTTGTCGC +
Preference number: 4 (lower is better)
Translates to: RTALVPRLRNPVLEGVLYETLGD*LVQSCR
Trigger: GCGACAACTCTGGACAAGTCAGTCCCCCAGAGTCTC...GTAAAGCACCCCCTCCAGGACCGGGTTTCTCAGCCTTGGCACTAGTGCTGTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GGGCCTAGTGACACTGGCAGGCTTTCTGTGTGCCAACTCTGGCTAGCTGACAGTGAACAGTGCAGTCCCTaGGAGGCAGCTGAGAGTACG +
Preference number: 4 (lower is better)
Translates to: GPSDTGRLSVCQLWLADSEQCSP*EAAEST
Trigger: CGTACTCTCAGCTGCCTCTCAGGGACTGCACTGTTC...ACTGTCAGCTAGCCAGAGTTGGCACACAGAAAGCCTGCCAGTGTCACTAGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp GGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTGCAGGAACCTGGGGGTaGAGAGGAACAGTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: GEKGYQECLEGEMGEPEGAGTWG*RGTVQS
Trigger: GGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGC...ACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AACAGCACTAGTGCCAAGGCTGAGAAACCCGGTCCTGGAGGGGGTGCTTTACCCGAAGCTTCGGGGACTTaGCAGACTGAGTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: NSTSAKAEKPGPGGGALPEASGT*QTESRA
Trigger: TGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTC...GGGTAAAGCACCCCCTCCAGGACCGGGTTTCTCAGCCTTGGCACTAGTGCTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AGGTGGAGCTGCAGGAAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCGAAGCTTCGGGGACTTaGCAGACTGAGTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: RWSCRKLRGLDRLSPEQAEASGT*QTESRA
Trigger: TGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTC...GGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTCCTGCAGCTCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AGCCTCCTATTTCTTTCTCAGAGCCAGGGCTACCCCGATGGCCACTGCCAGGATGCACACCGCAGGTACTaGCTGATTTCTGTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: SLLFLSQSQGYPDGHCQDAHRRY*LISVGP
Trigger: TGGGCCCACAGAAATCAGTCAGTACCTGCGGTGTGC...ATCCTGGCAGTGGCCATCGGGGTAGCCCTGGCTCTGAGAAAGAAATAGGAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp CCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGGACGCCATGTTGGAGGGTaGGGTCACCCCGGCGTGCCT +
Preference number: 4 (lower is better)
Translates to: PHPVNSGADQELPEKANGRHVGG*GHPGVP
Trigger: AGGCACGCCGGGGTGACCTCACCCTCCAACATGGCG...TCCATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CAATGTCTAGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCGCCATGTTGGAGGGTaGGGTCACCCCGGCGTGCCT +
Preference number: 4 (lower is better)
Translates to: QCLETFSFVISGRGCHWHRHVGG*GHPGVP
Trigger: AGGCACGCCGGGGTGACCTCACCCTCCAACATGGCG...ATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCTAGACATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGCATTCCCGAAATGCCTaGTATGTCACTGGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQHSRNA*YVTGLQ
Trigger: CTGAAGGCCAGTGACATATCAGGCATTTCGGGAATG...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000498133.5
ENST00000543133.5
CDS-3UTR GCA 90 bp CTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCTTAGGCAGGCTTTCTGTGTaGCAACTCTGGCTAGCTGAC +
Preference number: 4 (lower is better)
Translates to: LRGLDRLSPEQALARGILGRLSV*QLWLAD
Trigger: GTCAGCTAGCCAGAGTTGGCACACAGAAAGCCTGCC...TAAGATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCTTAGGATCCATTGCAATCTaGTGCCAGGACTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: LRGLDRLSPEQALARGILGSIAI*CQDSGP
Trigger: AGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCC...TAAGATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTCAACTGGGGCTTCAGGAAGTaGCTCTTGCAGCTCCCGCGC +
Preference number: 4 (lower is better)
Translates to: RRGIKNASRGRWVNQKVNWGFRK*LLQLPR
Trigger: GCGCGGGAGCTGCAAGAGGCACTTCCTGAAGCCCCA...GTTGACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AGGACAGCCCCAACACAGAGAATGGTCAGAACAGCACTAGTGCCAAGGCTGAGATGGGGCTTCAGGAAGTaGCTCTTGCAGCTCCCGCGC +
Preference number: 4 (lower is better)
Translates to: RTAPTQRMVRTALVPRLRWGFRK*LLQLPR
Trigger: GCGCGGGAGCTGCAAGAGGCACTTCCTGAAGCCCCA...TCTCAGCCTTGGCACTAGTGCTGTTCTGACCATTCTCTGTGTTGGGGCTGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp ACTCTGCCGAATAGTCCTCCAGGTATGTCACGCCAAACTGCAGCAGTGCGCTCATACCCCGATGGCCACTaGCAGGATGGCAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: TLPNSPPGMSRQTAAVRSYPDGH*QDGNSS
Trigger: GCTGCTGTTGCCATCCTGGCAGTGGCCATCGGGGTA...TGAGCGCACTGCTGCAGTTTGGCGTGACATACCTGGAGGACTATTCGGCAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399777.1
ENST00000498133.5
CDS-3UTR GCA 90 bp GGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTTACCCCGATGGCCACTaGCAGGATGGCAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: GEKGYQECLEGEMGEPEGYPDGH*QDGNSS
Trigger: GCTGCTGTTGCCATCCTGGCAGTGGCCATCGGGGTA...ACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGTGCCTAACATGCCACTaGCATGTTGAGCAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQCLTCH*HVEQKS
Trigger: GGACTTCTGCTCAACATGGCAGTGGCATGTTAGGCA...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGGACAGCCCCAACTCAGATGAATGTGAATaGCCCACCTCAAGCCCTAAC +
Preference number: 4 (lower is better)
Translates to: GCHWHLVGGAHHTQDSPNSDECE*PTSSPN
Trigger: GTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGA...GTTGGGGCTGTCCTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AACAGCACTAGTGCCAAGGCTGAGAAACCCGGTCCTGGAGGGGGTGCTTTACCCCGGTCCTGGAGGGGGTaGTTTACCCCTAAGATTCTC +
Preference number: 4 (lower is better)
Translates to: NSTSAKAEKPGPGGGALPRSWRG*FTPKIL
Trigger: GAGAATCTTAGGGGTAAAGCACCCCCTCCAGGACCG...GGGTAAAGCACCCCCTCCAGGACCGGGTTTCTCAGCCTTGGCACTAGTGCTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CACTCAGCAGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGCGATTGGTGCTTGAATaGGCTCAGCCAATGGGTGTG +
Preference number: 4 (lower is better)
Translates to: HSAAFLWVPVRGPPPPLQRLVLE*AQPMGV
Trigger: CACACCCATTGGCTGAGCGCATTCAAGCACCAATCG...CTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGGCAAAAAGCAGGAGCTaGAGTAGGAAGCAGTCCTCA +
Preference number: 4 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQAKSRS*SRKQSS
Trigger: TGAGGACTGCTTCCTACTGCAGCTCCTGCTTTTTGC...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GCCCTCAGACAGCGGCATGGGCTTCATCTCACCGGCGGGGGACAGTCTAGACTTTCTTATTCCAGCCGCTaGCATGAACTGTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: ALRQRHGLHLTGGGQSRLSYSSR*HELWSP
Trigger: TGGAGACCACAGTTCATGCCAGCGGCTGGAATAAGA...AAGTCTAGACTGTCCCCCGCCGGTGAGATGAAGCCCATGCCGCTGTCTGAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498133.5
CDS-3UTR CCA 90 bp CGCCCGTGGGATCTTAGCAGGAACCTGGGGGTGAAGAGGAACAGTGCAGTCCCTCACAGTTGGAGACTCTaGGGGACTGACTTGTCCAGA +
Preference number: 4 (lower is better)
Translates to: RPWDLSRNLGVKRNSAVPHSWRL*GTDLSR
Trigger: TCTGGACAAGTCAGTCCCCCAGAGTCTCCAACTGTG...AGGGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGCTAAGATCCCACGGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CAGCAGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGCAGACTGCCAGGAAGTaGTCACAGTTGGAGACTCTG +
Preference number: 4 (lower is better)
Translates to: QQRFCGFQCGDHLLHFSRQTARK*SQLETL
Trigger: CAGAGTCTCCAACTGTGACCACTTCCTGGCAGTCTG...CCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp GGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTCGGGCTTCTTCTCGCTaGCAGGGGACAGCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: GEKGYQECLEGEMGEPEGRASSR*QGTALP
Trigger: TGGAAGAGCTGTCCCCTGCCAGCGAGAAGAAGCCCG...ACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GCGGGGACCACCTCCTCCACTTCAGTAGGTTCAGTTGTTGCTGCTTTCACCTCTCGGGCTTCTTCTCGCTaGCAGGGGACAGCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: AGTTSSTSVGSVVAAFTSRASSR*QGTALP
Trigger: TGGAAGAGCTGTCCCCTGCCAGCGAGAAGAAGCCCG...AGAGGTGAAAGCAGCAACAACTGAACCTACTGAAGTGGAGGAGGTGGTCCCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp AATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCACCTCAGACAGCGGCATaGGCTTCATCTCACCGGCGG +
Preference number: 4 (lower is better)
Translates to: NAGEKGYQECLEGEMGEPPQTAA*ASSHRR
Trigger: CCGCCGGTGAGATGAAGCCCATGCCGCTGTCTGAGG...TGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp TCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTTCAGTTGTTGCAAGCCCTCGCCCGTaGGATCTTAGCAGGAACCTG +
Preference number: 4 (lower is better)
Translates to: SVGSSAGTTSSTSVGSVVASPRP*DLSRNL
Trigger: CAGGTTCCTGCTAAGATCCCACGGGCGAGGGCTTGC...AACAACTGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp AACAGCACTAGTGCCAAGGCTGAGAAACCCGGTCCTGGAGGGGGTGCTTTACCCAGTTGCACTCACAAGTaGGGACCCCAGGTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: NSTSAKAEKPGPGGGALPSCTHK*GPQVSF
Trigger: GAAGGAGACCTGGGGTCCCCACTTGTGAGTGCAACT...GGGTAAAGCACCCCCTCCAGGACCGGGTTTCTCAGCCTTGGCACTAGTGCTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CGCCCGTGGGATCTTAGCAGGAACCTGGGGGTGAAGAGGAACAGTGCAGTCCCTCCTTATTCCAGCCGCTaGCATGAACTGTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: RPWDLSRNLGVKRNSAVPPYSSR*HELWSP
Trigger: TGGAGACCACAGTTCATGCCAGCGGCTGGAATAAGG...AGGGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGCTAAGATCCCACGGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611738.4
3UTR CAA 72 bp GCAACAGCAGCAGCCCCTCCAAACAGCAGTATAGACTaGCCCTCAGACAGCGGCATGGGCTTCATCTCACCG +
Preference number: 4 (lower is better)
Translates to: ATAAAPPNSSID*PSDSGMGFISP
Trigger: CGGTGAGATGAAGCCCATGCCGCTGTCTGAGGGCAAGTCTATACTGCTGTTTGGAGGGGCTGCTGCTGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp GGCACAGTGGTGGGCACCTATAGTCCCAGCCTGTGCTCTTGGCTATTCAGGACCCATTCCCGAAATGCCTaGTATGTCACTGGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: GTVVGTYSPSLCSWLFRTHSRNA*YVTGWL
Trigger: GAGCCAGCCAGTGACATATCAGGCATTTCGGGAATG...GGTCCTGAATAGCCAAGAGCACAGGCTGGGACTATAGGTGCCCACCACTGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS-3UTR TCA 90 bp CAGCAGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGGCGCTCAAAGGTTCTTaGCCACGTCTTGTCAATTCC +
Preference number: 4 (lower is better)
Translates to: QQRFCGFQCGDHLLHFSRALKGS*PRLVNS
Trigger: GGAATTGACAAGACGTGGTCAAGAACCTTTGAGCGC...CCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
CDS-3UTR TCA 90 bp CTCCTTCTCACTCAGCAGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCGCGCTCAAAGGTTCTTaGCCACGTCTTGTCAATTCC +
Preference number: 4 (lower is better)
Translates to: LLLTQQRFCGFQCGDHLLALKGS*PRLVNS
Trigger: GGAATTGACAAGACGTGGTCAAGAACCTTTGAGCGC...GAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGAGTGAGAAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
CDS-3UTR TCA 90 bp GCCCTCAGACAGCGGCATGGGCTTCATCTCACCGGCGGGGGACAGTCTAGACTTATTCTCAATTTAGCATaGGCGGAGGCCCTTGGGATT +
Preference number: 4 (lower is better)
Translates to: ALRQRHGLHLTGGGQSRLILNLA*AEALGI
Trigger: AATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAAT...AAGTCTAGACTGTCCCCCGCCGGTGAGATGAAGCCCATGCCGCTGTCTGAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp TCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCATCCCTGAGAGGCAGCTaGGAGTACGGGCGAGCACCC +
Preference number: 4 (lower is better)
Translates to: SPIIPECSTNVQTAAGGSSLRGS*EYGRAP
Trigger: GGGTGCTCGCCCGTACTCTCAGCTGCCTCTCAGGGA...TGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AAGCTTTTCACTTCTTCAGGATCCATTGCAATCTGCTGCCAGGACTCAGGGCCTTCCCTGAGAGGCAGCTaGGAGTACGGGCGAGCACCC +
Preference number: 4 (lower is better)
Translates to: KLFTSSGSIAICCQDSGPSLRGS*EYGRAP
Trigger: GGGTGCTCGCCCGTACTCTCAGCTGCCTCTCAGGGA...AGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGTGAAAAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp GGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTGAACAGTGCAGTCCCTaGGAGGCAGCTGAGAGTACG +
Preference number: 4 (lower is better)
Translates to: GEKGYQECLEGEMGEPEGEQCSP*EAAEST
Trigger: CGTACTCTCAGCTGCCTCTCAGGGACTGCACTGTTC...ACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp ACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCAGGAACCTGGGGGTaGAGAGGAACAGTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: TFSFVISGRGCHWHLVGGAGTWG*RGTVQS
Trigger: GGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGC...TCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GGAGCTGCAGTAGGAAGCAGTCCTCATGAGGGCTGTTCCCTTCCACTGCTGGAGTCAGCAGCTCAGAGATaGACCTGGCTTCGATTGGTG +
Preference number: 4 (lower is better)
Translates to: GAAVGSSPHEGCSLPLLESAAQR*TWLRLV
Trigger: CACCAATCGAAGCCAGGTTCATCTCTGAGCTGCTGA...CTCCAGCAGTGGAAGGGAACAGCCCTCATGAGGACTGCTTCCTACTGCAGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GGAGCTGCAGTAGGAAGCAGTCCTCATGAGGGCTGTTCCCTTCCACTGCTGGAGACCGCAGGTACTGACTaGTTTCTGTGGGCCCAGAAT +
Preference number: 4 (lower is better)
Translates to: GAAVGSSPHEGCSLPLLETAGTD*FLWAQN
Trigger: ATTCTGGGCCCACAGAAATCAGTCAGTACCTGCGGT...CTCCAGCAGTGGAAGGGAACAGCCCTCATGAGGACTGCTTCCTACTGCAGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTGCACACCGCAGGTACTaGCTGATTTCTGTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: GEKGYQECLEGEMGEPEGAHRRY*LISVGP
Trigger: TGGGCCCACAGAAATCAGTCAGTACCTGCGGTGTGC...ACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTTCACGAGGGGGAGATGGGTaGACCAGAAGGTCAACAGTT +
Preference number: 4 (lower is better)
Translates to: SVSVGSSAGTTSSTSVGSRGGDG*TRRSTV
Trigger: AACTGTTGACCTTCTGGTTCACCCATCTCCCCCTCG...TGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp GGGCCTAGTGACACTGGCAGGCTTTCTGTGTGCCAACTCTGGCTAGCTGACAGTCGAGGGGGAGATGGGTaGACCAGAAGGTCAACAGTT +
Preference number: 4 (lower is better)
Translates to: GPSDTGRLSVCQLWLADSRGGDG*TRRSTV
Trigger: AACTGTTGACCTTCTGGTTCACCCATCTCCCCCTCG...ACTGTCAGCTAGCCAGAGTTGGCACACAGAAAGCCTGCCAGTGTCACTAGGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp AGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTCAACCCTGGCCCTGGCCCCTaGCCCAGAAGAGATGAAAGA +
Preference number: 4 (lower is better)
Translates to: RRGIKNASRGRWVNQKVNPGPGP*PRRDER
Trigger: TCTTTCATCTCTTCTGGGGCAGGGGCCAGGGCCAGG...GTTGACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CACTCAGCAGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTATGTCACGCCAAACTaGAGCAGTGCGCTCAAAGGT +
Preference number: 4 (lower is better)
Translates to: HSAAFLWVPVRGPPPPLQYVTPN*SSALKG
Trigger: ACCTTTGAGCGCACTGCTGCAGTTTGGCGTGACATA...CTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
CDS-3UTR GCA 90 bp AGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTTCAGGCAGGCTTTCTGTGTaGCAACTCTGGCTAGCTGAC +
Preference number: 4 (lower is better)
Translates to: SVSVGSSAGTTSSTSVGSGRLSV*QLWLAD
Trigger: GTCAGCTAGCCAGAGTTGGCACACAGAAAGCCTGCC...TGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp GGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGGACAGCCCCAACTCTCTCCAGCTCCGTTaGTGTCTAAGCTTTTCACTT +
Preference number: 4 (lower is better)
Translates to: GCHWHLVGGAHHTQDSPNSLQLR*CLSFSL
Trigger: AAGTGAAAAGCTTAGACAGCAACGGAGCTGGAGAGA...GTTGGGGCTGTCCTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CAACTCTGGCTAGCTGACAGTGACACAGGTAAGCTCTCAGACTGCCAGGAAGTGTCAGGAAGTGCCTCTTaGAGCTCCCGCGCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: QLWLADSDTGKLSDCQEVSGSAS*SSRAGK
Trigger: CTTGCCAGCGCGGGAGCTGCAAGAGGCACTTCCTGA...CACTTCCTGGCAGTCTGAGAGCTTACCTGTGTCACTGTCAGCTAGCCAGAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp AATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCATCAGGAAGTGCCTCTTaGAGCTCCCGCGCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: NAGEKGYQECLEGEMGEPSGSAS*SSRAGK
Trigger: CTTGCCAGCGCGGGAGCTGCAAGAGGCACTTCCTGA...TGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GGAGGCCCTTGGGATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTTTCTGTGGGTTCCAGTaGGGGGACCACCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: GGPWDLQSDECECPTSSPFCGFQ*GDHLLH
Trigger: GTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAA...AGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATCCCAAGGGCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCCCTCAAGCCCTAACATaGCTAACATGCCACTGCCAT +
Preference number: 4 (lower is better)
Translates to: KLRGLDRLSPEQALARGIPQALT*LTCHCH
Trigger: ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGG...GATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGTCAGATGAATGTGAATaGCCCACCTCAAGCCCTAAC +
Preference number: 4 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQSDECE*PTSSPN
Trigger: GTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGA...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GGGCCTAGTGACACTGGCAGGCTTTCTGTGTGCCAACTCTGGCTAGCTGACAGTCGGTCCTGGAGGGGGTaGTTTACCCCTAAGATTCTC +
Preference number: 4 (lower is better)
Translates to: GPSDTGRLSVCQLWLADSRSWRG*FTPKIL
Trigger: GAGAATCTTAGGGGTAAAGCACCCCCTCCAGGACCG...ACTGTCAGCTAGCCAGAGTTGGCACACAGAAAGCCTGCCAGTGTCACTAGGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp CGCCCGTGGGATCTTAGCAGGAACCTGGGGGTGAAGAGGAACAGTGCAGTCCCTAGAGTTACTTGCAGTTaGACTCACAAGTGGGGACCC +
Preference number: 4 (lower is better)
Translates to: RPWDLSRNLGVKRNSAVPRVTCS*THKWGP
Trigger: GGGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCT...AGGGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGCTAAGATCCCACGGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AGGTGGAGCTGCAGGAAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCAAGGGGTATCAAGAATaGCTCGAGGGGGAGATGGGT +
Preference number: 4 (lower is better)
Translates to: RWSCRKLRGLDRLSPEQAKGYQE*LEGEMG
Trigger: ACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTT...GGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTCCTGCAGCTCCACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TGCTGTCTAAGCTTTTCACTTCTTCAGGATCCATTGCAATCTGCTGCCAGGACTGAGGTCACCCCGGCGTaGCTTCGTCACGGCCGGCGT +
Preference number: 4 (lower is better)
Translates to: CCLSFSLLQDPLQSAARTEVTPA*LRHGRR
Trigger: ACGCCGGCCGTGACGAAGGCACGCCGGGGTGACCTC...AGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGTGAAAAGCTTAGACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337612.9
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp GAATTAGAGGAGTTGTTCTCACTCTTCTCTCCAGCTCCGTTGCTGTCTAAGCTTGAGGTCACCCCGGCGTaGCTTCGTCACGGCCGGCGT +
Preference number: 4 (lower is better)
Translates to: ELEELFSLFSPAPLLSKLEVTPA*LRHGRR
Trigger: ACGCCGGCCGTGACGAAGGCACGCCGGGGTGACCTC...AAGCTTAGACAGCAACGGAGCTGGAGAGAAGAGTGAGAACAACTCCTCTAATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337612.9
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGAGGACGCCATTGAATTaGCTGGTGAGGCTCCAAAAA +
Preference number: 4 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQRTPLN*LVRLQK
Trigger: TTTTTGGAGCCTCACCAGCCAATTCAATGGCGTCCT...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000616863.4
CDS-3UTR CCA 90 bp GGGCCTAGTGACACTGGCAGGCTTTCTGTGTGCCAACTCTGGCTAGCTGACAGTGGAAGTGGTCACAGTTaGAGACTCTGGGGGACTGAC +
Preference number: 4 (lower is better)
Translates to: GPSDTGRLSVCQLWLADSGSGHS*RLWGTD
Trigger: GTCAGTCCCCCAGAGTCTCCAACTGTGACCACTTCC...ACTGTCAGCTAGCCAGAGTTGGCACACAGAAAGCCTGCCAGTGTCACTAGGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp CTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCTTACAGACTGCCAGGAAGTaGTCACAGTTGGAGACTCTG +
Preference number: 4 (lower is better)
Translates to: LRGLDRLSPEQALARGILQTARK*SQLETL
Trigger: CAGAGTCTCCAACTGTGACCACTTCCTGGCAGTCTG...TAAGATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CGCCCGTGGGATCTTAGCAGGAACCTGGGGGTGAAGAGGAACAGTGCAGTCCCTTCTGTGTGCCAACTCTaGCTAGCTGACAGTGACACA +
Preference number: 4 (lower is better)
Translates to: RPWDLSRNLGVKRNSAVPSVCQL*LADSDT
Trigger: TGTGTCACTGTCAGCTAGCCAGAGTTGGCACACAGA...AGGGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGCTAAGATCCCACGGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CTCAGAGATGAACCTGGCTTCGATTGGTGCTTGAATGCGCTCAGCCAATGGGTGTTGCAGCTCCCGCGCTaGCAAGACCACAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: LRDEPGFDWCLNALSQWVLQLPR*QDHRSH
Trigger: GTGGCTTCTGTGGTCTTGCCAGCGCGGGAGCTGCAA...CACCCATTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGGTTCATCTCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CAACTCTGGCTAGCTGACAGTGACACAGGTAAGCTCTCAGACTGCCAGGAAGTGTTGCAGCTCCCGCGCTaGCAAGACCACAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: QLWLADSDTGKLSDCQEVLQLPR*QDHRSH
Trigger: GTGGCTTCTGTGGTCTTGCCAGCGCGGGAGCTGCAA...CACTTCCTGGCAGTCTGAGAGCTTACCTGTGTCACTGTCAGCTAGCCAGAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp AGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTTGCAGCTCCCGCGCTaGCAAGACCACAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: RDIFVCHLWEGVPLASSGLQLPR*QDHRSH
Trigger: GTGGCTTCTGTGGTCTTGCCAGCGCGGGAGCTGCAA...CCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CAACTCTGGCTAGCTGACAGTGACACAGGTAAGCTCTCAGACTGCCAGGAAGTGCGGGCTTCTTCTCGCTaGCAGGGGACAGCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: QLWLADSDTGKLSDCQEVRASSR*QGTALP
Trigger: TGGAAGAGCTGTCCCCTGCCAGCGAGAAGAAGCCCG...CACTTCCTGGCAGTCTGAGAGCTTACCTGTGTCACTGTCAGCTAGCCAGAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp AAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCTGTCCAGACAGCTGCTaGAGGTTCAAATTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: KLRGLDRLSPEQALARGICPDSC*RFKFQP
Trigger: TGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACA...GATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGATGAGCGGAGGCCCTTaGGATTTACAGTCAGATGAA +
Preference number: 4 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQMSGGP*DLQSDE
Trigger: TTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCAT...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GGAGGCCCTTGGGATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTGCAAGCCCTCGCCCGTaGGATCTTAGCAGGAACCTG +
Preference number: 4 (lower is better)
Translates to: GGPWDLQSDECECPTSSPASPRP*DLSRNL
Trigger: CAGGTTCCTGCTAAGATCCCACGGGCGAGGGCTTGC...AGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATCCCAAGGGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CAGGGATGCTGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAGCAAGCCCTCGCCCGTaGGATCTTAGCAGGAACCTG +
Preference number: 4 (lower is better)
Translates to: QGCCHILLTQELTKSYQRASPRP*DLSRNL
Trigger: CAGGTTCCTGCTAAGATCCCACGGGCGAGGGCTTGC...TCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCAGCATCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTCAACGCAAGCCCTCGCCCGTaGGATCTTAGCAGGAACCTG +
Preference number: 4 (lower is better)
Translates to: RRGIKNASRGRWVNQKVNASPRP*DLSRNL
Trigger: CAGGTTCCTGCTAAGATCCCACGGGCGAGGGCTTGC...GTTGACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GAAATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACGCAAGCCCTCGCCCGTaGGATCTTAGCAGGAACCTG +
Preference number: 4 (lower is better)
Translates to: EMQVRRGIKNASRGRWVNASPRP*DLSRNL
Trigger: CAGGTTCCTGCTAAGATCCCACGGGCGAGGGCTTGC...GTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCTTATGGAGGTGGAAGGAATaGCCTCCTACTATCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LRGLDRLSPEQALARGILWRWKE*PPTISS
Trigger: GGAGCTGATAGTAGGAGGCCATTCCTTCCACCTCCA...TAAGATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTGCCTCGAGGGGGAGATaGGTGAACCAGAAGGTCAAC +
Preference number: 4 (lower is better)
Translates to: GEKGYQECLEGEMGEPEGASRGR*VNQKVN
Trigger: GTTGACCTTCTGGTTCACCCATCTCCCCCTCGAGGC...ACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCGGTAGTGGCTGCATCTaGTATCCCTGGGACAGAAAT +
Preference number: 4 (lower is better)
Translates to: KLRGLDRLSPEQALARGIGSGCI*YPWDRN
Trigger: ATTTCTGTCCCAGGGATACCAGATGCAGCCACTACC...GATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGGACAGCCCCAACGAGATAATGCTTGTGTaGGAATTTGGGCAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: GCHWHLVGGAHHTQDSPNEIMLV*EFGQKL
Trigger: GAGCTTCTGCCCAAATTCCCACACAAGCATTATCTC...GTTGGGGCTGTCCTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GAATTAGAGGAGTTGTTCTCACTCTTCTCTCCAGCTCCGTTGCTGTCTAAGCTTCCGCCGCCGCCATGTTaGAGGGTGAGGTCACCCCGG +
Preference number: 4 (lower is better)
Translates to: ELEELFSLFSPAPLLSKLPPPPC*RVRSPR
Trigger: CCGGGGTGACCTCACCCTCCAACATGGCGGCGGCGG...AAGCTTAGACAGCAACGGAGCTGGAGAGAAGAGTGAGAACAACTCCTCTAATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp AAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTCCGCCGCCGCCATGTTaGAGGGTGAGGTCACCCCGG +
Preference number: 4 (lower is better)
Translates to: KCPDSCWRFKFQPIQLQPPPPPC*RVRSPR
Trigger: CCGGGGTGACCTCACCCTCCAACATGGCGGCGGCGG...AGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000337612.9
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GGCACAGTGGTGGGCACCTATAGTCCCAGCCTGTGCTCTTGGCTATTCAGGACCTTGAACCCCTTGGGGTaGGGAAAGATGTTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: GTVVGTYSPSLCSWLFRTLNPLG*GKMLLL
Trigger: CAAGAGCAACATCTTTCCTCACCCCAAGGGGTTCAA...GGTCCTGAATAGCCAAGAGCACAGGCTGGGACTATAGGTGCCCACCACTGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS-3UTR TCA 90 bp GGCACAGTGGTGGGCACCTATAGTCCCAGCCTGTGCTCTTGGCTATTCAGGACCCAAGCAGTCTTCCATTaGGCTTTCTGGATTGGCAGG +
Preference number: 4 (lower is better)
Translates to: GTVVGTYSPSLCSWLFRTQAVFH*AFWIGR
Trigger: CCTGCCAATCCAGAAAGCTCAATGGAAGACTGCTTG...GGTCCTGAATAGCCAAGAGCACAGGCTGGGACTATAGGTGCCCACCACTGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS-3UTR TCA 90 bp CAGGATGGCAACAGCAGCAGCCCCTCCAAACAGCAGTATAGACTTGCCCTCAGATTCCAGCCGCTGGCATaGACTGTGGTCTCCAGTGTA +
Preference number: 4 (lower is better)
Translates to: QDGNSSSPSKQQYRLALRFQPLA*TVVSSV
Trigger: TACACTGGAGACCACAGTTCATGCCAGCGGCTGGAA...TCTGAGGGCAAGTCTATACTGCTGTTTGGAGGGGCTGCTGCTGTTGCCATCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498133.5
CDS-3UTR TCA 90 bp GGCACAGTGGTGGGCACCTATAGTCCCAGCCTGTGCTCTTGGCTATTCAGGACCGCGCTCAAAGGTTCTTaGCCACGTCTTGTCAATTCC +
Preference number: 4 (lower is better)
Translates to: GTVVGTYSPSLCSWLFRTALKGS*PRLVNS
Trigger: GGAATTGACAAGACGTGGTCAAGAACCTTTGAGCGC...GGTCCTGAATAGCCAAGAGCACAGGCTGGGACTATAGGTGCCCACCACTGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS-3UTR TCA 90 bp CGCCCGTGGGATCTTAGCAGGAACCTGGGGGTGAAGAGGAACAGTGCAGTCCCTTGCTATCTTCTGCAGTaGTTCCAGGGTATTCCTCCT +
Preference number: 4 (lower is better)
Translates to: RPWDLSRNLGVKRNSAVPCYLLQ*FQGIPP
Trigger: AGGAGGAATACCCTGGAATCACTGCAGAAGATAGCA...AGGGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGCTAAGATCCCACGGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CTCCTTCTCACTCAGCAGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCTGCTATCTTCTGCAGTaGTTCCAGGGTATTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LLLTQQRFCGFQCGDHLLCYLLQ*FQGIPP
Trigger: AGGAGGAATACCCTGGAATCACTGCAGAAGATAGCA...GAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGAGTGAGAAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp GTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATGTTGAGGAGACTCTGGGGGACTaGCTTGTCCAGAGTTGTCGC +
Preference number: 4 (lower is better)
Translates to: VNAPPQALTCLTCHCHVEETLGD*LVQSCR
Trigger: GCGACAACTCTGGACAAGTCAGTCCCCCAGAGTCTC...CTCAACATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTCAACGCAGGGAGGTGGCAGTaGTATGTGGAAGCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: RRGIKNASRGRWVNQKVNAGRWQ*YVEARE
Trigger: CTCCCTTGCTTCCACATATCACTGCCACCTCCCTGC...GTTGACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CAGGGATGCTGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAGCAGGGAGGTGGCAGTaGTATGTGGAAGCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: QGCCHILLTQELTKSYQRAGRWQ*YVEARE
Trigger: CTCCCTTGCTTCCACATATCACTGCCACCTCCCTGC...TCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCAGCATCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AGGACAGCCCCAACACAGAGAATGGTCAGAACAGCACTAGTGCCAAGGCTGAGAGCAGGGAGGTGGCAGTaGTATGTGGAAGCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: RTAPTQRMVRTALVPRLRAGRWQ*YVEARE
Trigger: CTCCCTTGCTTCCACATATCACTGCCACCTCCCTGC...TCTCAGCCTTGGCACTAGTGCTGTTCTGACCATTCTCTGTGTTGGGGCTGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GGAGGCCCTTGGGATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTGCAGGGAGGTGGCAGTaGTATGTGGAAGCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: GGPWDLQSDECECPTSSPAGRWQ*YVEARE
Trigger: CTCCCTTGCTTCCACATATCACTGCCACCTCCCTGC...AGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATCCCAAGGGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGGACAGCCCCAACTGGATTTCTCAACTGTaGTCACTTCTGTGTCAGGTT +
Preference number: 4 (lower is better)
Translates to: GCHWHLVGGAHHTQDSPNWISQL*SLLCQV
Trigger: AACCTGACACAGAAGTGATCACAGTTGAGAAATCCA...GTTGGGGCTGTCCTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CGCCCGTGGGATCTTAGCAGGAACCTGGGGGTGAAGAGGAACAGTGCAGTCCCTATGCCACTGCCATGTTaGGCAGAAGTCCCCAATTAT +
Preference number: 4 (lower is better)
Translates to: RPWDLSRNLGVKRNSAVPMPLPC*AEVPNY
Trigger: ATAATTGGGGACTTCTGCTCAACATGGCAGTGGCAT...AGGGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGCTAAGATCCCACGGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CACTCAGCAGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGATGCCACTGCCATGTTaGGCAGAAGTCCCCAATTAT +
Preference number: 4 (lower is better)
Translates to: HSAAFLWVPVRGPPPPLQMPLPC*AEVPNY
Trigger: ATAATTGGGGACTTCTGCTCAACATGGCAGTGGCAT...CTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp CACTCAGCAGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGATTCTCAATTTAGCATaGGCGGAGGCCCTTGGGATT +
Preference number: 4 (lower is better)
Translates to: HSAAFLWVPVRGPPPPLQILNLA*AEALGI
Trigger: AATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAAT...CTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp TCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCTCCCTGAGAGGCAGCTaGGAGTACGGGCGAGCACCC +
Preference number: 4 (lower is better)
Translates to: STNVQTAAGGSNSSQYNSSLRGS*EYGRAP
Trigger: GGGTGCTCGCCCGTACTCTCAGCTGCCTCTCAGGGA...GGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGGAACAGTGCAGTCCCTaGGAGGCAGCTGAGAGTACG +
Preference number: 4 (lower is better)
Translates to: RDIFVCHLWEGVPLASSGEQCSP*EAAEST
Trigger: CGTACTCTCAGCTGCCTCTCAGGGACTGCACTGTTC...CCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CTCTCTAGCCAGAGTTACTTGCAGTTGCACTCACAAGTGGGGACCCCAGGTCTCCTCAGCCAATGGGTGTaGGGATCCAGAACTGGCAAG +
Preference number: 4 (lower is better)
Translates to: LSSQSYLQLHSQVGTPGLLSQWV*GSRTGK
Trigger: CTTGCCAGTTCTGGATCCTCACACCCATTGGCTGAG...GAGACCTGGGGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AGAACAGCACTAGTGCCAAGGCTGAGAAACCCGGTCCTGGAGGGGGTGCTTTACTCAGCAGCTCAGAGATaGACCTGGCTTCGATTGGTG +
Preference number: 4 (lower is better)
Translates to: RTALVPRLRNPVLEGVLYSAAQR*TWLRLV
Trigger: CACCAATCGAAGCCAGGTTCATCTCTGAGCTGCTGA...GTAAAGCACCCCCTCCAGGACCGGGTTTCTCAGCCTTGGCACTAGTGCTGTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GGAGGCCCTTGGGATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTGCACACCGCAGGTACTaGCTGATTTCTGTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: GGPWDLQSDECECPTSSPAHRRY*LISVGP
Trigger: TGGGCCCACAGAAATCAGTCAGTACCTGCGGTGTGC...AGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATCCCAAGGGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CAGGATGGCAACAGCAGCAGCCCCTCCAAACAGCAGTATAGACTTGCCCTCAGACGAGGGGGAGATGGGTaGACCAGAAGGTCAACAGTT +
Preference number: 4 (lower is better)
Translates to: QDGNSSSPSKQQYRLALRRGGDG*TRRSTV
Trigger: AACTGTTGACCTTCTGGTTCACCCATCTCCCCCTCG...TCTGAGGGCAAGTCTATACTGCTGTTTGGAGGGGCTGCTGCTGTTGCCATCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp TGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTGGCGGCGGCGGCAGTTaGTTCCGACAGGGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: CWRFKFQPIQLQPYILLSGGGGS*FRQGPP
Trigger: TGGGGGACCCTGTCGGAAGCAACTGCCGCCGCCGCC...AGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GGCACAGTGGTGGGCACCTATAGTCCCAGCCTGTGCTCTTGGCTATTCAGGACCTATGTCACGCCAAACTaGAGCAGTGCGCTCAAAGGT +
Preference number: 4 (lower is better)
Translates to: GTVVGTYSPSLCSWLFRTYVTPN*SSALKG
Trigger: ACCTTTGAGCGCACTGCTGCAGTTTGGCGTGACATA...GGTCCTGAATAGCCAAGAGCACAGGCTGGGACTATAGGTGCCCACCACTGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS-3UTR GCA 90 bp AGGTGGAGCTGCAGGAAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCTATGTCACGCCAAACTaGAGCAGTGCGCTCAAAGGT +
Preference number: 4 (lower is better)
Translates to: RWSCRKLRGLDRLSPEQAYVTPN*SSALKG
Trigger: ACCTTTGAGCGCACTGCTGCAGTTTGGCGTGACATA...GGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTCCTGCAGCTCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000618481.4
CDS-3UTR GCA 90 bp CTCTCTAGCCAGAGTTACTTGCAGTTGCACTCACAAGTGGGGACCCCAGGTCTCGGCAGGCTTTCTGTGTaGCAACTCTGGCTAGCTGAC +
Preference number: 4 (lower is better)
Translates to: LSSQSYLQLHSQVGTPGLGRLSV*QLWLAD
Trigger: GTCAGCTAGCCAGAGTTGGCACACAGAAAGCCTGCC...GAGACCTGGGGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AGAACAGCACTAGTGCCAAGGCTGAGAAACCCGGTCCTGGAGGGGGTGCTTTACTCCATTGCAATCTGCTaGCAGGACTCAGGGCCTAGT +
Preference number: 4 (lower is better)
Translates to: RTALVPRLRNPVLEGVLYSIAIC*QDSGPS
Trigger: ACTAGGCCCTGAGTCCTGGCAGCAGATTGCAATGGA...GTAAAGCACCCCCTCCAGGACCGGGTTTCTCAGCCTTGGCACTAGTGCTGTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CTCCTTCTCACTCAGCAGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCTTCTTCAGGATCCATTaGAATCTGCTGCCAGGACTC +
Preference number: 4 (lower is better)
Translates to: LLLTQQRFCGFQCGDHLLFFRIH*NLLPGL
Trigger: GAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAA...GAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGAGTGAGAAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp GGAGGCCCTTGGGATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTCAGCAGCCTCTTCCATaGCCTCGGGCACCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: GGPWDLQSDECECPTSSPQQPLP*PRAPLL
Trigger: AAGAAGAGGTGCCCGAGGGCATGGAAGAGGCTGCTG...AGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATCCCAAGGGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTCAACCAGCAGCCTCTTCCATaGCCTCGGGCACCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: RRGIKNASRGRWVNQKVNQQPLP*PRAPLL
Trigger: AAGAAGAGGTGCCCGAGGGCATGGAAGAGGCTGCTG...GTTGACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGTGGGGCTTCAGGAAGTaGCTCTTGCAGCTCCCGCGC +
Preference number: 4 (lower is better)
Translates to: SDECECPTSSPNMPNMPLWGFRK*LLQLPR
Trigger: GCGCGGGAGCTGCAAGAGGCACTTCCTGAAGCCCCA...CAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGGACAGCCCCAACAGGTTCAGTTGTTGCTaGTTTCACCTCTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: GCHWHLVGGAHHTQDSPNRFSCC*FHLFFI
Trigger: GATGAAGAAGAGGTGAAAGCAGCAACAACTGAACCT...GTTGGGGCTGTCCTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GCCCTCAGACAGCGGCATGGGCTTCATCTCACCGGCGGGGGACAGTCTAGACTTAAGGCTCTCTTCCCTTaGGTTTATCTCCTTCTCACT +
Preference number: 4 (lower is better)
Translates to: ALRQRHGLHLTGGGQSRLKALFP*VYLLLT
Trigger: AGTGAGAAGGAGATAAACGCAAGGGAAGAGAGCCTT...AAGTCTAGACTGTCCCCCGCCGGTGAGATGAAGCCCATGCCGCTGTCTGAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp GGAGCTGCAGTAGGAAGCAGTCCTCATGAGGGCTGTTCCCTTCCACTGCTGGAGCCTCAAGCCCTAACATaGCTAACATGCCACTGCCAT +
Preference number: 4 (lower is better)
Translates to: GAAVGSSPHEGCSLPLLEPQALT*LTCHCH
Trigger: ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGG...CTCCAGCAGTGGAAGGGAACAGCCCTCATGAGGACTGCTTCCTACTGCAGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CGCCCGTGGGATCTTAGCAGGAACCTGGGGGTGAAGAGGAACAGTGCAGTCCCTAGTGGGTGCAGAGCCTaGTCATCGAGAAAGATGAAA +
Preference number: 4 (lower is better)
Translates to: RPWDLSRNLGVKRNSAVPSGCRA*SSRKMK
Trigger: TTTCATCTTTCTCGATGAGCAGGCTCTGCACCCACT...AGGGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGCTAAGATCCCACGGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGAAGGAAGAACAGGGATaGTGCCACATCCTGTTAACT +
Preference number: 4 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQKEEQG*CHILLT
Trigger: AGTTAACAGGATGTGGCAGCATCCCTGTTCTTCCTT...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CTATCCCAATTCTTCCTAAGTAAACCCTCTCTCGCTAAAGCAGTGGGTCTCAATGAGGTCACCCCGGCGTaGCTTCGTCACGGCCGGCGT +
Preference number: 4 (lower is better)
Translates to: LSQFFLSKPSLAKAVGLNEVTPA*LRHGRR
Trigger: ACGCCGGCCGTGACGAAGGCACGCCGGGGTGACCTC...ATTGAGACCCACTGCTTTAGCGAGAGAGGGTTTACTTAGGAAGAATTGGGATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTGAGGTCACCCCGGCGTaGCTTCGTCACGGCCGGCGT +
Preference number: 4 (lower is better)
Translates to: CWRFKFQPIQLQPYILLSEVTPA*LRHGRR
Trigger: ACGCCGGCCGTGACGAAGGCACGCCGGGGTGACCTC...AGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CGCCCGTGGGATCTTAGCAGGAACCTGGGGGTGAAGAGGAACAGTGCAGTCCCTAGGACGCCATTGAATTaGCTGGTGAGGCTCCAAAAA +
Preference number: 4 (lower is better)
Translates to: RPWDLSRNLGVKRNSAVPRTPLN*LVRLQK
Trigger: TTTTTGGAGCCTCACCAGCCAATTCAATGGCGTCCT...AGGGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGCTAAGATCCCACGGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000616863.4
CDS-3UTR CCA 90 bp AGGTGGAGCTGCAGGAAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCTGCCTGATATGTCACTaGCTGGCTCAGGAGCATTTG +
Preference number: 4 (lower is better)
Translates to: RWSCRKLRGLDRLSPEQACLICH*LAQEHL
Trigger: CAAATGCTCCTGAGCCAGCCAGTGACATATCAGGCA...GGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTCCTGCAGCTCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317582.10
ENST00000611738.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GGCACAGTGGTGGGCACCTATAGTCCCAGCCTGTGCTCTTGGCTATTCAGGACCTGCCTGATATGTCACTaGCTGGCTCAGGAGCATTTG +
Preference number: 4 (lower is better)
Translates to: GTVVGTYSPSLCSWLFRTCLICH*LAQEHL
Trigger: CAAATGCTCCTGAGCCAGCCAGTGACATATCAGGCA...GGTCCTGAATAGCCAAGAGCACAGGCTGGGACTATAGGTGCCCACCACTGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS-3UTR CCA 90 bp GGAGCTGCAGTAGGAAGCAGTCCTCATGAGGGCTGTTCCCTTCCACTGCTGGAGTCTTATTCCAGCCGCTaGCATGAACTGTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: GAAVGSSPHEGCSLPLLESYSSR*HELWSP
Trigger: TGGAGACCACAGTTCATGCCAGCGGCTGGAATAAGA...CTCCAGCAGTGGAAGGGAACAGCCCTCATGAGGACTGCTTCCTACTGCAGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317582.10
ENST00000543133.5
ENST00000618481.4
CDS-3UTR CCA 90 bp GGCACAGTGGTGGGCACCTATAGTCCCAGCCTGTGCTCTTGGCTATTCAGGACCTCTTATTCCAGCCGCTaGCATGAACTGTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: GTVVGTYSPSLCSWLFRTSYSSR*HELWSP
Trigger: TGGAGACCACAGTTCATGCCAGCGGCTGGAATAAGA...GGTCCTGAATAGCCAAGAGCACAGGCTGGGACTATAGGTGCCCACCACTGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS-3UTR CCA 90 bp GGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTGGAAGTGGTCACAGTTaGAGACTCTGGGGGACTGAC +
Preference number: 4 (lower is better)
Translates to: GEKGYQECLEGEMGEPEGGSGHS*RLWGTD
Trigger: GTCAGTCCCCCAGAGTCTCCAACTGTGACCACTTCC...ACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CAGGATGGCAACAGCAGCAGCCCCTCCAAACAGCAGTATAGACTTGCCCTCAGAGGAAGTGGTCACAGTTaGAGACTCTGGGGGACTGAC +
Preference number: 4 (lower is better)
Translates to: QDGNSSSPSKQQYRLALRGSGHS*RLWGTD
Trigger: GTCAGTCCCCCAGAGTCTCCAACTGTGACCACTTCC...TCTGAGGGCAAGTCTATACTGCTGTTTGGAGGGGCTGCTGCTGTTGCCATCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp CAGGGATGCTGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAGGTGGCAGTGATATGTaGAAGCAAGGGAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: QGCCHILLTQELTKSYQRGGSDM*KQGSWG
Trigger: GCCCCAGCTCCCTTGCTTCCACATATCACTGCCACC...TCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCAGCATCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GAAATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACGGTGGCAGTGATATGTaGAAGCAAGGGAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: EMQVRRGIKNASRGRWVNGGSDM*KQGSWG
Trigger: GCCCCAGCTCCCTTGCTTCCACATATCACTGCCACC...GTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTCAACGGTGGCAGTGATATGTaGAAGCAAGGGAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: RRGIKNASRGRWVNQKVNGGSDM*KQGSWG
Trigger: GCCCCAGCTCCCTTGCTTCCACATATCACTGCCACC...GTTGACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AGGACAGCCCCAACACAGAGAATGGTCAGAACAGCACTAGTGCCAAGGCTGAGATCAGCAGCGTTTCTGTaGGTTCCAGTGCGGGGACCA +
Preference number: 4 (lower is better)
Translates to: RTAPTQRMVRTALVPRLRSAAFL*VPVRGP
Trigger: TGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGA...TCTCAGCCTTGGCACTAGTGCTGTTCTGACCATTCTCTGTGTTGGGGCTGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CTCAGAGATGAACCTGGCTTCGATTGGTGCTTGAATGCGCTCAGCCAATGGGTGTCAGCAGCGTTTCTGTaGGTTCCAGTGCGGGGACCA +
Preference number: 4 (lower is better)
Translates to: LRDEPGFDWCLNALSQWVSAAFL*VPVRGP
Trigger: TGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGA...CACCCATTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGGTTCATCTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp ACTTCTTCAGGATCCATTGCAATCTGCTGCCAGGACTCAGGGCCTAGTGACACTCGGGCTTCTTCTCGCTaGCAGGGGACAGCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: TSSGSIAICCQDSGPSDTRASSR*QGTALP
Trigger: TGGAAGAGCTGTCCCCTGCCAGCGAGAAGAAGCCCG...AGTGTCACTAGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp CAATGTCTAGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCCAGGGCTACCCCGATaGCCACTGCCAGGATGGCAA +
Preference number: 4 (lower is better)
Translates to: QCLETFSFVISGRGCHWHPGLPR*PLPGWQ
Trigger: TTGCCATCCTGGCAGTGGCCATCGGGGTAGCCCTGG...ATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCTAGACATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp TGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGCCAGGGCTACCCCGATaGCCACTGCCAGGATGGCAA +
Preference number: 4 (lower is better)
Translates to: CHILLTQELTKSYQRKPMPGLPR*PLPGWQ
Trigger: TTGCCATCCTGGCAGTGGCCATCGGGGTAGCCCTGG...CATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CAGGATGGCAACAGCAGCAGCCCCTCCAAACAGCAGTATAGACTTGCCCTCAGAAGTTGCACTCACAAGTaGGGACCCCAGGTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: QDGNSSSPSKQQYRLALRSCTHK*GPQVSF
Trigger: GAAGGAGACCTGGGGTCCCCACTTGTGAGTGCAACT...TCTGAGGGCAAGTCTATACTGCTGTTTGGAGGGGCTGCTGCTGTTGCCATCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp GGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTAGTTGCACTCACAAGTaGGGACCCCAGGTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: GEKGYQECLEGEMGEPEGSCTHK*GPQVSF
Trigger: GAAGGAGACCTGGGGTCCCCACTTGTGAGTGCAACT...ACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GGGCCTAGTGACACTGGCAGGCTTTCTGTGTGCCAACTCTGGCTAGCTGACAGTGAACCTGGCTTCGATTaGTGCTTGAATGCGCTCAGC +
Preference number: 4 (lower is better)
Translates to: GPSDTGRLSVCQLWLADSEPGFD*CLNALS
Trigger: GCTGAGCGCATTCAAGCACCAATCGAAGCCAGGTTC...ACTGTCAGCTAGCCAGAGTTGGCACACAGAAAGCCTGCCAGTGTCACTAGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGTTAGAGGGTATAAGTTaGAGGTGGAAGGAATGGCCT +
Preference number: 4 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQLEGIS*RWKEWP
Trigger: AGGCCATTCCTTCCACCTCCAACTTATACCCTCTAA...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CAGGGATGCTGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAGCCTCGAGGGGGAGATaGGTGAACCAGAAGGTCAAC +
Preference number: 4 (lower is better)
Translates to: QGCCHILLTQELTKSYQRASRGR*VNQKVN
Trigger: GTTGACCTTCTGGTTCACCCATCTCCCCCTCGAGGC...TCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCAGCATCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AGGTGGAGCTGCAGGAAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCTGCATCTGGTATCCCTaGGACAGAAATGCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: RWSCRKLRGLDRLSPEQACIWYP*DRNAGE
Trigger: CTCACCTGCATTTCTGTCCCAGGGATACCAGATGCA...GGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTCCTGCAGCTCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AACAGCACTAGTGCCAAGGCTGAGAAACCCGGTCCTGGAGGGGGTGCTTTACCCGGTAGTGGCTGCATCTaGTATCCCTGGGACAGAAAT +
Preference number: 4 (lower is better)
Translates to: NSTSAKAEKPGPGGGALPGSGCI*YPWDRN
Trigger: ATTTCTGTCCCAGGGATACCAGATGCAGCCACTACC...GGGTAAAGCACCCCCTCCAGGACCGGGTTTCTCAGCCTTGGCACTAGTGCTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGGAGATAATGCTTGTGTaGGAATTTGGGCAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQEIMLV*EFGQKL
Trigger: GAGCTTCTGCCCAAATTCCCACACAAGCATTATCTC...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp TGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTCCGCCGCCGCCATGTTaGAGGGTGAGGTCACCCCGG +
Preference number: 4 (lower is better)
Translates to: CWRFKFQPIQLQPYILLSPPPPC*RVRSPR
Trigger: CCGGGGTGACCTCACCCTCCAACATGGCGGCGGCGG...AGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000337612.9
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCTTAGAAGCTATATCTAGTTaGACCCCTTGGGGTGAGGAA +
Preference number: 4 (lower is better)
Translates to: LRGLDRLSPEQALARGILEAISS*TPWGEE
Trigger: TTCCTCACCCCAAGGGGTTCAACTAGATATAGCTTC...TAAGATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000498133.5
ENST00000543133.5
ENST00000616863.4
CDS-3UTR TCA 90 bp GGCACAGTGGTGGGCACCTATAGTCCCAGCCTGTGCTCTTGGCTATTCAGGACCGAAGCTATATCTAGTTaGACCCCTTGGGGTGAGGAA +
Preference number: 4 (lower is better)
Translates to: GTVVGTYSPSLCSWLFRTEAISS*TPWGEE
Trigger: TTCCTCACCCCAAGGGGTTCAACTAGATATAGCTTC...GGTCCTGAATAGCCAAGAGCACAGGCTGGGACTATAGGTGCCCACCACTGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS-3UTR TCA 90 bp AATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCACTGGATTGGCAGGGCTaGACACTGGAGAAGTGTGAC +
Preference number: 4 (lower is better)
Translates to: NAGEKGYQECLEGEMGEPLDWQG*TLEKCD
Trigger: GTCACACTTCTCCAGTGTTCAGCCCTGCCAATCCAG...TGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATGTTGAGTTCCAGCCGCTGGCATaGACTGTGGTCTCCAGTGTA +
Preference number: 4 (lower is better)
Translates to: VNAPPQALTCLTCHCHVEFQPLA*TVVSSV
Trigger: TACACTGGAGACCACAGTTCATGCCAGCGGCTGGAA...CTCAACATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317582.10
ENST00000498133.5
ENST00000543133.5
ENST00000611738.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GGCACAGTGGTGGGCACCTATAGTCCCAGCCTGTGCTCTTGGCTATTCAGGACCAGCCACCTTGCTGAATaGTGTACTCTGCCGAATAGT +
Preference number: 4 (lower is better)
Translates to: GTVVGTYSPSLCSWLFRTSHLAE*CTLPNS
Trigger: ACTATTCGGCAGAGTACATCATTCAGCAAGGTGGCT...GGTCCTGAATAGCCAAGAGCACAGGCTGGGACTATAGGTGCCCACCACTGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS-3UTR TCA 90 bp AGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTCAACCCCCAGCCACCTTGCTaGATGATGTACTCTGCCGAA +
Preference number: 4 (lower is better)
Translates to: RRGIKNASRGRWVNQKVNPQPPC*MMYSAE
Trigger: TTCGGCAGAGTACATCATTCAGCAAGGTGGCTGGGG...GTTGACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000618481.4
CDS-3UTR TCA 90 bp AGGTGGAGCTGCAGGAAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCATGCCACTGCCATGTTaGGCAGAAGTCCCCAATTAT +
Preference number: 4 (lower is better)
Translates to: RWSCRKLRGLDRLSPEQAMPLPC*AEVPNY
Trigger: ATAATTGGGGACTTCTGCTCAACATGGCAGTGGCAT...GGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTCCTGCAGCTCCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AGGTGGAGCTGCAGGAAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCATTCTCAATTTAGCATaGGCGGAGGCCCTTGGGATT +
Preference number: 4 (lower is better)
Translates to: RWSCRKLRGLDRLSPEQAILNLA*AEALGI
Trigger: AATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAAT...GGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTCCTGCAGCTCCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTTCCCTGAGAGGCAGCTaGGAGTACGGGCGAGCACCC +
Preference number: 4 (lower is better)
Translates to: AAGGSNSSQYNSNLTSFCSLRGS*EYGRAP
Trigger: GGGTGCTCGCCCGTACTCTCAGCTGCCTCTCAGGGA...ACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCCCTGAGAGGCAGCTaGGAGTACGGGCGAGCACCC +
Preference number: 4 (lower is better)
Translates to: RQLLEVQIPANTTPTLHPSLRGS*EYGRAP
Trigger: GGGTGCTCGCCCGTACTCTCAGCTGCCTCTCAGGGA...AGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTCCCTGAGAGGCAGCTaGGAGTACGGGCGAGCACCC +
Preference number: 4 (lower is better)
Translates to: KCPDSCWRFKFQPIQLQPSLRGS*EYGRAP
Trigger: GGGTGCTCGCCCGTACTCTCAGCTGCCTCTCAGGGA...AGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AGAAGTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGCAGGAACCTGGGGGTaGAGAGGAACAGTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: RSPQLSQSVPQMSRQLLEAGTWG*RGTVQS
Trigger: GGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGC...CTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGACTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACGCAGGAACCTGGGGGTaGAGAGGAACAGTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: SQMNVNAPPQALTCLTCHAGTWG*RGTVQS
Trigger: GGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGC...GTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AGGACAGCCCCAACACAGAGAATGGTCAGAACAGCACTAGTGCCAAGGCTGAGAGAAGCTTCGGGGACTTaGCAGACTGAGTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: RTAPTQRMVRTALVPRLREASGT*QTESRA
Trigger: TGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTC...TCTCAGCCTTGGCACTAGTGCTGTTCTGACCATTCTCTGTGTTGGGGCTGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp ACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGAAGCTTCGGGGACTTaGCAGACTGAGTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: TFSFVISGRGCHWHLVGGEASGT*QTESRA
Trigger: TGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTC...TCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTCAACGCTTCGATTGGTGCTTaGATGCGCTCAGCCAATGGG +
Preference number: 4 (lower is better)
Translates to: RRGIKNASRGRWVNQKVNASIGA*MRSANG
Trigger: CCCATTGGCTGAGCGCATTCAAGCACCAATCGAAGC...GTTGACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGGCTTCGATTGGTGCTTaGATGCGCTCAGCCAATGGG +
Preference number: 4 (lower is better)
Translates to: RDIFVCHLWEGVPLASSGASIGA*MRSANG
Trigger: CCCATTGGCTGAGCGCATTCAAGCACCAATCGAAGC...CCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCACAGAGCAGTTGAGATaGGGTCTAAGGACTAACAAG +
Preference number: 4 (lower is better)
Translates to: KLRGLDRLSPEQALARGITEQLR*GLRTNK
Trigger: CTTGTTAGTCCTTAGACCTCATCTCAACTGCTCTGT...GATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CTCCTTCTCACTCAGCAGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCACAGAGCAGTTGAGATaGGGTCTAAGGACTAACAAG +
Preference number: 4 (lower is better)
Translates to: LLLTQQRFCGFQCGDHLLTEQLR*GLRTNK
Trigger: CTTGTTAGTCCTTAGACCTCATCTCAACTGCTCTGT...GAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGAGTGAGAAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp CTCAGAGATGAACCTGGCTTCGATTGGTGCTTGAATGCGCTCAGCCAATGGGTGCGAGGGGGAGATGGGTaGACCAGAAGGTCAACAGTT +
Preference number: 4 (lower is better)
Translates to: LRDEPGFDWCLNALSQWVRGGDG*TRRSTV
Trigger: AACTGTTGACCTTCTGGTTCACCCATCTCCCCCTCG...CACCCATTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGGTTCATCTCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CAATGTCTAGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCCTGGCCCTGGCCCCTaGCCCAGAAGAGATGAAAGA +
Preference number: 4 (lower is better)
Translates to: QCLETFSFVISGRGCHWHPGPGP*PRRDER
Trigger: TCTTTCATCTCTTCTGGGGCAGGGGCCAGGGCCAGG...ATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCTAGACATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GCGGGGACCACCTCCTCCACTTCAGTAGGTTCAGTTGTTGCTGCTTTCACCTCTGCCAAACTGCAGCAGTaGGCTCAAAGGTTCTTGACC +
Preference number: 4 (lower is better)
Translates to: AGTTSSTSVGSVVAAFTSAKLQQ*AQRFLT
Trigger: GGTCAAGAACCTTTGAGCGCACTGCTGCAGTTTGGC...AGAGGTGAAAGCAGCAACAACTGAACCTACTGAAGTGGAGGAGGTGGTCCCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
CDS-3UTR GCA 90 bp AGAACAGCACTAGTGCCAAGGCTGAGAAACCCGGTCCTGGAGGGGGTGCTTTACGGTAAGCTCTCAGACTaGCAGGAAGTGGTCACAGTT +
Preference number: 4 (lower is better)
Translates to: RTALVPRLRNPVLEGVLYGKLSD*QEVVTV
Trigger: AACTGTGACCACTTCCTGGCAGTCTGAGAGCTTACC...GTAAAGCACCCCCTCCAGGACCGGGTTTCTCAGCCTTGGCACTAGTGCTGTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp ACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGGCAGGCTTTCTGTGTaGCAACTCTGGCTAGCTGAC +
Preference number: 4 (lower is better)
Translates to: TFSFVISGRGCHWHLVGGGRLSV*QLWLAD
Trigger: GTCAGCTAGCCAGAGTTGGCACACAGAAAGCCTGCC...TCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GGAGGCCCTTGGGATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTGGCAGGCTTTCTGTGTaGCAACTCTGGCTAGCTGAC +
Preference number: 4 (lower is better)
Translates to: GGPWDLQSDECECPTSSPGRLSV*QLWLAD
Trigger: GTCAGCTAGCCAGAGTTGGCACACAGAAAGCCTGCC...AGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATCCCAAGGGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GAAATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACGGCAGGCTTTCTGTGTaGCAACTCTGGCTAGCTGAC +
Preference number: 4 (lower is better)
Translates to: EMQVRRGIKNASRGRWVNGRLSV*QLWLAD
Trigger: GTCAGCTAGCCAGAGTTGGCACACAGAAAGCCTGCC...GTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTTCAGTTGTTTCCATTGCAATCTGCTaGCAGGACTCAGGGCCTAGT +
Preference number: 4 (lower is better)
Translates to: SVGSSAGTTSSTSVGSVVSIAIC*QDSGPS
Trigger: ACTAGGCCCTGAGTCCTGGCAGCAGATTGCAATGGA...AACAACTGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp AGGTGGAGCTGCAGGAAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCTTCTTCAGGATCCATTaGAATCTGCTGCCAGGACTC +
Preference number: 4 (lower is better)
Translates to: RWSCRKLRGLDRLSPEQAFFRIH*NLLPGL
Trigger: GAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAA...GGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTCCTGCAGCTCCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGGATCAGGAAGTGCCTCTTaGAGCTCCCGCGCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: PHPVNSGADQELPEKANGSGSAS*SSRAGK
Trigger: CTTGCCAGCGCGGGAGCTGCAAGAGGCACTTCCTGA...TCCATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATTGGGGCTTCAGGAAGTaGCTCTTGCAGCTCCCGCGC +
Preference number: 4 (lower is better)
Translates to: QSVPQMSRQLLEVQIPANWGFRK*LLQLPR
Trigger: GCGCGGGAGCTGCAAGAGGCACTTCCTGAAGCCCCA...ATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGTTCTGTGGGTTCCAGTaGGGGGACCACCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: CHILLTQELTKSYQRKPMFCGFQ*GDHLLH
Trigger: GTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAA...CATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CAATGTCTAGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATTACCCCGATGGCCACTaGCAGGATGGCAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: QCLETFSFVISGRGCHWHYPDGH*QDGNSS
Trigger: GCTGCTGTTGCCATCCTGGCAGTGGCCATCGGGGTA...ATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCTAGACATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCATACCCCGATGGCCACTaGCAGGATGGCAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: SPIIPECSTNVQTAAGGSYPDGH*QDGNSS
Trigger: GCTGCTGTTGCCATCCTGGCAGTGGCCATCGGGGTA...TGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AACAGCACTAGTGCCAAGGCTGAGAAACCCGGTCCTGGAGGGGGTGCTTTACCCTCAGATGAATGTGAATaGCCCACCTCAAGCCCTAAC +
Preference number: 4 (lower is better)
Translates to: NSTSAKAEKPGPGGGALPSDECE*PTSSPN
Trigger: GTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGA...GGGTAAAGCACCCCCTCCAGGACCGGGTTTCTCAGCCTTGGCACTAGTGCTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp ACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGACGGTCCTGGAGGGGGTaGTTTACCCCTAAGATTCTC +
Preference number: 4 (lower is better)
Translates to: TFSFVISGRGCHWHLVGGRSWRG*FTPKIL
Trigger: GAGAATCTTAGGGGTAAAGCACCCCCTCCAGGACCG...TCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTTCAAGAGTTACTTGCAGTTaGACTCACAAGTGGGGACCC +
Preference number: 4 (lower is better)
Translates to: SVSVGSSAGTTSSTSVGSRVTCS*THKWGP
Trigger: GGGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCT...TGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp AACAGCACTAGTGCCAAGGCTGAGAAACCCGGTCCTGGAGGGGGTGCTTTACCCCTAGCCAGAGTTACTTaGAGTTGCACTCACAAGTGG +
Preference number: 4 (lower is better)
Translates to: NSTSAKAEKPGPGGGALPLARVT*SCTHKW
Trigger: CCACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAG...GGGTAAAGCACCCCCTCCAGGACCGGGTTTCTCAGCCTTGGCACTAGTGCTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GGCACAGTGGTGGGCACCTATAGTCCCAGCCTGTGCTCTTGGCTATTCAGGACCAGGACGCCATTGAATTaGCTGGTGAGGCTCCAAAAA +
Preference number: 4 (lower is better)
Translates to: GTVVGTYSPSLCSWLFRTRTPLN*LVRLQK
Trigger: TTTTTGGAGCCTCACCAGCCAATTCAATGGCGTCCT...GGTCCTGAATAGCCAAGAGCACAGGCTGGGACTATAGGTGCCCACCACTGTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS-3UTR CCA 90 bp GGAGCTGCAGTAGGAAGCAGTCCTCATGAGGGCTGTTCCCTTCCACTGCTGGAGGTCCAGAGTTGTCGCTaGGCAGGATGTAAATGTCAT +
Preference number: 4 (lower is better)
Translates to: GAAVGSSPHEGCSLPLLEVQSCR*AGCKCH
Trigger: ATGACATTTACATCCTGCCCAGCGACAACTCTGGAC...CTCCAGCAGTGGAAGGGAACAGCCCTCATGAGGACTGCTTCCTACTGCAGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTTCATCTGTGTGCCAACTCTaGCTAGCTGACAGTGACACA +
Preference number: 4 (lower is better)
Translates to: SVSVGSSAGTTSSTSVGSSVCQL*LADSDT
Trigger: TGTGTCACTGTCAGCTAGCCAGAGTTGGCACACAGA...TGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp TCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGTTGCAGCTCCCGCGCTaGCAAGACCACAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: SDECECPTSSPNMPNMPLLQLPR*QDHRSH
Trigger: GTGGCTTCTGTGGTCTTGCCAGCGCGGGAGCTGCAA...CAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp ACTTCTTCAGGATCCATTGCAATCTGCTGCCAGGACTCAGGGCCTAGTGACACTGGTGGCAGTGATATGTaGAAGCAAGGGAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: TSSGSIAICCQDSGPSDTGGSDM*KQGSWG
Trigger: GCCCCAGCTCCCTTGCTTCCACATATCACTGCCACC...AGTGTCACTAGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp CAGAAGTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGACGGGCTTCTTCTCGCTaGCAGGGGACAGCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: QKSPIIPECSTNVQTAAGRASSR*QGTALP
Trigger: TGGAAGAGCTGTCCCCTGCCAGCGAGAAGAAGCCCG...TCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGACTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp TCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCCCAGGGCTACCCCGATaGCCACTGCCAGGATGGCAA +
Preference number: 4 (lower is better)
Translates to: STNVQTAAGGSNSSQYNSPGLPR*PLPGWQ
Trigger: TTGCCATCCTGGCAGTGGCCATCGGGGTAGCCCTGG...GGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp TGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACCCAGGGCTACCCCGATaGCCACTGCCAGGATGGCAA +
Preference number: 4 (lower is better)
Translates to: CPDSCWRFKFQPIQLQPYPGLPR*PLPGWQ
Trigger: TTGCCATCCTGGCAGTGGCCATCGGGGTAGCCCTGG...GTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GCTCAGCCAATGGGTGTGAGGATCCAGAACTGGCAAGTGTTAATACTGGAACTCGCAAGCCCTCGCCCGTaGGATCTTAGCAGGAACCTG +
Preference number: 4 (lower is better)
Translates to: AQPMGVRIQNWQVLILELASPRP*DLSRNL
Trigger: CAGGTTCCTGCTAAGATCCCACGGGCGAGGGCTTGC...GAGTTCCAGTATTAACACTTGCCAGTTCTGGATCCTCACACCCATTGGCTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AAGCTTTTCACTTCTTCAGGATCCATTGCAATCTGCTGCCAGGACTCAGGGCCTGCAAGCCCTCGCCCGTaGGATCTTAGCAGGAACCTG +
Preference number: 4 (lower is better)
Translates to: KLFTSSGSIAICCQDSGPASPRP*DLSRNL
Trigger: CAGGTTCCTGCTAAGATCCCACGGGCGAGGGCTTGC...AGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGTGAAAAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp CAATGTCTAGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATGCAAGCCCTCGCCCGTaGGATCTTAGCAGGAACCTG +
Preference number: 4 (lower is better)
Translates to: QCLETFSFVISGRGCHWHASPRP*DLSRNL
Trigger: CAGGTTCCTGCTAAGATCCCACGGGCGAGGGCTTGC...ATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCTAGACATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTCAACAGTTGCACTCACAAGTaGGGACCCCAGGTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: RRGIKNASRGRWVNQKVNSCTHK*GPQVSF
Trigger: GAAGGAGACCTGGGGTCCCCACTTGTGAGTGCAACT...GTTGACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AGGACAGCCCCAACACAGAGAATGGTCAGAACAGCACTAGTGCCAAGGCTGAGAAGTTGCACTCACAAGTaGGGACCCCAGGTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: RTAPTQRMVRTALVPRLRSCTHK*GPQVSF
Trigger: GAAGGAGACCTGGGGTCCCCACTTGTGAGTGCAACT...TCTCAGCCTTGGCACTAGTGCTGTTCTGACCATTCTCTGTGTTGGGGCTGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp ACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAAGTTGCACTCACAAGTaGGGACCCCAGGTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: TFSFVISGRGCHWHLVGGSCTHK*GPQVSF
Trigger: GAAGGAGACCTGGGGTCCCCACTTGTGAGTGCAACT...TCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp TGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGCAGCCGCCGCCGCCATGTTaGAGGGTGAGGTCACCCCGG +
Preference number: 4 (lower is better)
Translates to: CTYFEDSQRQHFYKVELQPPPPC*RVRSPR
Trigger: CCGGGGTGACCTCACCCTCCAACATGGCGGCGGCGG...CTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000337612.9
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCACTAAACACAGTGCCTaGCTCAGGAGCATTTGCAAT +
Preference number: 4 (lower is better)
Translates to: KLRGLDRLSPEQALARGITKHSA*LRSICN
Trigger: ATTGCAAATGCTCCTGAGCCAGGCACTGTGTTTAGT...GATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355028.4
CDS-3UTR TCA 90 bp GGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTTTGAACCCCTTGGGGTaGGGAAAGATGTTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: GEKGYQECLEGEMGEPEGLNPLG*GKMLLL
Trigger: CAAGAGCAACATCTTTCCTCACCCCAAGGGGTTCAA...ACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000543133.5
ENST00000616863.4
CDS-3UTR TCA 90 bp GGAGCTGCAGTAGGAAGCAGTCCTCATGAGGGCTGTTCCCTTCCACTGCTGGAGCAAAGCCTGTGCTGGTaGAGGCTTCAGAAATTTCTT +
Preference number: 4 (lower is better)
Translates to: GAAVGSSPHEGCSLPLLEQSLCW*RLQKFL
Trigger: AAGAAATTTCTGAAGCCTTCACCAGCACAGGCTTTG...CTCCAGCAGTGGAAGGGAACAGCCCTCATGAGGACTGCTTCCTACTGCAGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CAGGGATGCTGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAACACTGGAGAAGTGTaGCGGTCAAAGCCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: QGCCHILLTQELTKSYQRNTGEV*RSKPVL
Trigger: CAGCACAGGCTTTGACCGTCACACTTCTCCAGTGTT...TCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCAGCATCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR TCA 90 bp TCCATTGCAATCTGCTGCCAGGACTCAGGGCCTAGTGACACTGGCAGGCTTTCTGCGCTCAAAGGTTCTTaGCCACGTCTTGTCAATTCC +
Preference number: 4 (lower is better)
Translates to: SIAICCQDSGPSDTGRLSALKGS*PRLVNS
Trigger: GGAATTGACAAGACGTGGTCAAGAACCTTTGAGCGC...AGAAAGCCTGCCAGTGTCACTAGGCCCTGAGTCCTGGCAGCAGATTGCAATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
CDS-3UTR TCA 90 bp CAATGTCTAGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATGAGACTCTGGGGGACTaGCTTGTCCAGAGTTGTCGC +
Preference number: 4 (lower is better)
Translates to: QCLETFSFVISGRGCHWHETLGD*LVQSCR
Trigger: GCGACAACTCTGGACAAGTCAGTCCCCCAGAGTCTC...ATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCTAGACATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp TCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCAGCAGGGAGGTGGCAGTaGTATGTGGAAGCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: SPIIPECSTNVQTAAGGSAGRWQ*YVEARE
Trigger: CTCCCTTGCTTCCACATATCACTGCCACCTCCCTGC...TGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp TCCACAAGGCTCTCTTCCCTTGCGTTTATCTCCTTCTCACTCAGCAGCGTTTCTGCAGGGAGGTGGCAGTaGTATGTGGAAGCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: STRLSSLAFISFSLSSVSAGRWQ*YVEARE
Trigger: CTCCCTTGCTTCCACATATCACTGCCACCTCCCTGC...AGAAACGCTGCTGAGTGAGAAGGAGATAAACGCAAGGGAAGAGAGCCTTGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp ATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATGCAGGGAGGTGGCAGTaGTATGTGGAAGCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: MNVNAPPQALTCLTCHCHAGRWQ*YVEARE
Trigger: CTCCCTTGCTTCCACATATCACTGCCACCTCCCTGC...ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GGGCCTAGTGACACTGGCAGGCTTTCTGTGTGCCAACTCTGGCTAGCTGACAGTATTCTCAATTTAGCATaGGCGGAGGCCCTTGGGATT +
Preference number: 4 (lower is better)
Translates to: GPSDTGRLSVCQLWLADSILNLA*AEALGI
Trigger: AATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAAT...ACTGTCAGCTAGCCAGAGTTGGCACACAGAAAGCCTGCCAGTGTCACTAGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp GCCCTCAGACAGCGGCATGGGCTTCATCTCACCGGCGGGGGACAGTCTAGACTTGCTCATCGAGAAAGATaGAATTCTAAGGGGATTAAG +
Preference number: 4 (lower is better)
Translates to: ALRQRHGLHLTGGGQSRLAHRER*NSKGIK
Trigger: CTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGC...AAGTCTAGACTGTCCCCCGCCGGTGAGATGAAGCCCATGCCGCTGTCTGAGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp GTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGCAGGTCCCTGAGAGGCAGCTaGGAGTACGGGCGAGCACCC +
Preference number: 4 (lower is better)
Translates to: VHISKIPKGSIFTRWSCRSLRGS*EYGRAP
Trigger: GGGTGCTCGCCCGTACTCTCAGCTGCCTCTCAGGGA...CCTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATGCAGGAACCTGGGGGTaGAGAGGAACAGTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: QSVPQMSRQLLEVQIPANAGTWG*RGTVQS
Trigger: GGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGC...ATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp ACTTCTTCAGGATCCATTGCAATCTGCTGCCAGGACTCAGGGCCTAGTGACACTGCTTCGATTGGTGCTTaGATGCGCTCAGCCAATGGG +
Preference number: 4 (lower is better)
Translates to: TSSGSIAICCQDSGPSDTASIGA*MRSANG
Trigger: CCCATTGGCTGAGCGCATTCAAGCACCAATCGAAGC...AGTGTCACTAGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp GAAATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACTCAGCAGCTCAGAGATaGACCTGGCTTCGATTGGTG +
Preference number: 4 (lower is better)
Translates to: EMQVRRGIKNASRGRWVNSAAQR*TWLRLV
Trigger: CACCAATCGAAGCCAGGTTCATCTCTGAGCTGCTGA...GTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CGCCCGTGGGATCTTAGCAGGAACCTGGGGGTGAAGAGGAACAGTGCAGTCCCTCTAGTTCCATTACCGTaGAATACAACTGGCCAAATC +
Preference number: 4 (lower is better)
Translates to: RPWDLSRNLGVKRNSAVPLVPLP*NTTGQI
Trigger: GATTTGGCCAGTTGTATTTCACGGTAATGGAACTAG...AGGGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGCTAAGATCCCACGGGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AGGTGGAGCTGCAGGAAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCACAGAGCAGTTGAGATaGGGTCTAAGGACTAACAAG +
Preference number: 4 (lower is better)
Translates to: RWSCRKLRGLDRLSPEQATEQLR*GLRTNK
Trigger: CTTGTTAGTCCTTAGACCTCATCTCAACTGCTCTGT...GGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTCCTGCAGCTCCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AGGACAGCCCCAACACAGAGAATGGTCAGAACAGCACTAGTGCCAAGGCTGAGAACCGCAGGTACTGACTaGTTTCTGTGGGCCCAGAAT +
Preference number: 4 (lower is better)
Translates to: RTAPTQRMVRTALVPRLRTAGTD*FLWAQN
Trigger: ATTCTGGGCCCACAGAAATCAGTCAGTACCTGCGGT...TCTCAGCCTTGGCACTAGTGCTGTTCTGACCATTCTCTGTGTTGGGGCTGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GAAATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACACCGCAGGTACTGACTaGTTTCTGTGGGCCCAGAAT +
Preference number: 4 (lower is better)
Translates to: EMQVRRGIKNASRGRWVNTAGTD*FLWAQN
Trigger: ATTCTGGGCCCACAGAAATCAGTCAGTACCTGCGGT...GTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CTAAGCTTTTCACTTCTTCAGGATCCATTGCAATCTGCTGCCAGGACTCAGGGCGCACACCGCAGGTACTaGCTGATTTCTGTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: LSFSLLQDPLQSAARTQGAHRRY*LISVGP
Trigger: TGGGCCCACAGAAATCAGTCAGTACCTGCGGTGTGC...GCCCTGAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGTGAAAAGCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp TCTCTTCTGAAAAGCCTCCTATTTCTTTCTCAGAGCCAGGGCTACCCCGATGGCCTCTCCGTCCAGATGTaGCCTGAAGACCCAAACCCT +
Preference number: 4 (lower is better)
Translates to: SLLKSLLFLSQSQGYPDGLSVQM*PEDPNP
Trigger: AGGGTTTGGGTCTTCAGGTCACATCTGGACGGAGAG...GCCATCGGGGTAGCCCTGGCTCTGAGAAAGAAATAGGAGGCTTTTCAGAAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337612.9
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp ATCATGATAGTAGGCTATAACTCAAGTTTCAATGCCACGATGGTCGTGCTTTCTGGCGGCGGCGGCAGTTaGTTCCGACAGGGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: IMIVGYNSSFNATMVVLSGGGGS*FRQGPP
Trigger: TGGGGGACCCTGTCGGAAGCAACTGCCGCCGCCGCC...AGAAAGCACGACCATCGTGGCATTGAAACTTGAGTTATAGCCTACTATCATGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS-3UTR GCA 90 bp CTCAGAGATGAACCTGGCTTCGATTGGTGCTTGAATGCGCTCAGCCAATGGGTGGCCAAACTGCAGCAGTaGGCTCAAAGGTTCTTGACC +
Preference number: 4 (lower is better)
Translates to: LRDEPGFDWCLNALSQWVAKLQQ*AQRFLT
Trigger: GGTCAAGAACCTTTGAGCGCACTGCTGCAGTTTGGC...CACCCATTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGGTTCATCTCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000618481.4
CDS-3UTR GCA 90 bp GGCACAGTGGTGGGCACCTATAGTCCCAGCCTGTGCTCTTGGCTATTCAGGACCCTGAATGATGTACTCTaGCGAATAGTCCTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: GTVVGTYSPSLCSWLFRTLNDVL*RIVLQV
Trigger: TACCTGGAGGACTATTCGGCAGAGTACATCATTCAG...GGTCCTGAATAGCCAAGAGCACAGGCTGGGACTATAGGTGCCCACCACTGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS-3UTR GCA 90 bp TCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTTCAGTTGTTGGTAAGCTCTCAGACTaGCAGGAAGTGGTCACAGTT +
Preference number: 4 (lower is better)
Translates to: SVGSSAGTTSSTSVGSVVGKLSD*QEVVTV
Trigger: AACTGTGACCACTTCCTGGCAGTCTGAGAGCTTACC...AACAACTGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp AACAGCACTAGTGCCAAGGCTGAGAAACCCGGTCCTGGAGGGGGTGCTTTACCCTCTCTCCAGCTCCGTTaGTGTCTAAGCTTTTCACTT +
Preference number: 4 (lower is better)
Translates to: NSTSAKAEKPGPGGGALPSLQLR*CLSFSL
Trigger: AAGTGAAAAGCTTAGACAGCAACGGAGCTGGAGAGA...GGGTAAAGCACCCCCTCCAGGACCGGGTTTCTCAGCCTTGGCACTAGTGCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GGAGCTGCAGTAGGAAGCAGTCCTCATGAGGGCTGTTCCCTTCCACTGCTGGAGTCTCTCCAGCTCCGTTaGTGTCTAAGCTTTTCACTT +
Preference number: 4 (lower is better)
Translates to: GAAVGSSPHEGCSLPLLESLQLR*CLSFSL
Trigger: AAGTGAAAAGCTTAGACAGCAACGGAGCTGGAGAGA...CTCCAGCAGTGGAAGGGAACAGCCCTCATGAGGACTGCTTCCTACTGCAGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GCTCAGCCAATGGGTGTGAGGATCCAGAACTGGCAAGTGTTAATACTGGAACTCCAGCAGCCTCTTCCATaGCCTCGGGCACCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: AQPMGVRIQNWQVLILELQQPLP*PRAPLL
Trigger: AAGAAGAGGTGCCCGAGGGCATGGAAGAGGCTGCTG...GAGTTCCAGTATTAACACTTGCCAGTTCTGGATCCTCACACCCATTGGCTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CAATGTCTAGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCAGCAGCCTCTTCCATaGCCTCGGGCACCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: QCLETFSFVISGRGCHWHQQPLP*PRAPLL
Trigger: AAGAAGAGGTGCCCGAGGGCATGGAAGAGGCTGCTG...ATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCTAGACATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGGACAGCAGCCTCTTCCATaGCCTCGGGCACCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: PHPVNSGADQELPEKANGQQPLP*PRAPLL
Trigger: AAGAAGAGGTGCCCGAGGGCATGGAAGAGGCTGCTG...TCCATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATTCAGGAAGTGCCTCTTaGAGCTCCCGCGCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: QSVPQMSRQLLEVQIPANSGSAS*SSRAGK
Trigger: CTTGCCAGCGCGGGAGCTGCAAGAGGCACTTCCTGA...ATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCTTAAAATGTCCAGACAGCTaGTGGAGGTTCAAATTCCAG +
Preference number: 4 (lower is better)
Translates to: LRGLDRLSPEQALARGILKCPDS*WRFKFQ
Trigger: CTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTT...TAAGATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GCGGGGACCACCTCCTCCACTTCAGTAGGTTCAGTTGTTGCTGCTTTCACCTCTCCTCAAGCCCTAACATaGCTAACATGCCACTGCCAT +
Preference number: 4 (lower is better)
Translates to: AGTTSSTSVGSVVAAFTSPQALT*LTCHCH
Trigger: ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGG...AGAGGTGAAAGCAGCAACAACTGAACCTACTGAAGTGGAGGAGGTGGTCCCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp ACTCTGCCGAATAGTCCTCCAGGTATGTCACGCCAAACTGCAGCAGTGCGCTCAAGAGTTACTTGCAGTTaGACTCACAAGTGGGGACCC +
Preference number: 4 (lower is better)
Translates to: TLPNSPPGMSRQTAAVRSRVTCS*THKWGP
Trigger: GGGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCT...TGAGCGCACTGCTGCAGTTTGGCGTGACATACCTGGAGGACTATTCGGCAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399777.1
ENST00000498133.5
CDS-3UTR GCA 90 bp CAACTCTGGCTAGCTGACAGTGACACAGGTAAGCTCTCAGACTGCCAGGAAGTGCGATTGGTGCTTGAATaGGCTCAGCCAATGGGTGTG +
Preference number: 4 (lower is better)
Translates to: QLWLADSDTGKLSDCQEVRLVLE*AQPMGV
Trigger: CACACCCATTGGCTGAGCGCATTCAAGCACCAATCG...CACTTCCTGGCAGTCTGAGAGCTTACCTGTGTCACTGTCAGCTAGCCAGAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp GTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATGTTGAGCGATTGGTGCTTGAATaGGCTCAGCCAATGGGTGTG +
Preference number: 4 (lower is better)
Translates to: VNAPPQALTCLTCHCHVERLVLE*AQPMGV
Trigger: CACACCCATTGGCTGAGCGCATTCAAGCACCAATCG...CTCAACATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GAAATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCGATTGGTGCTTGAATaGGCTCAGCCAATGGGTGTG +
Preference number: 4 (lower is better)
Translates to: EMQVRRGIKNASRGRWVNRLVLE*AQPMGV
Trigger: CACACCCATTGGCTGAGCGCATTCAAGCACCAATCG...GTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTCAACCCTGGCTTCGATTGGTaGTTGAATGCGCTCAGCCAA +
Preference number: 4 (lower is better)
Translates to: RRGIKNASRGRWVNQKVNPGFDW*LNALSQ
Trigger: TTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGG...GTTGACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CTCAGAGATGAACCTGGCTTCGATTGGTGCTTGAATGCGCTCAGCCAATGGGTGCCTGGCTTCGATTGGTaGTTGAATGCGCTCAGCCAA +
Preference number: 4 (lower is better)
Translates to: LRDEPGFDWCLNALSQWVPGFDW*LNALSQ
Trigger: TTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGG...CACCCATTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGGTTCATCTCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CTCTCTAGCCAGAGTTACTTGCAGTTGCACTCACAAGTGGGGACCCCAGGTCTCGCAAAAAGCAGGAGCTaGAGTAGGAAGCAGTCCTCA +
Preference number: 4 (lower is better)
Translates to: LSSQSYLQLHSQVGTPGLAKSRS*SRKQSS
Trigger: TGAGGACTGCTTCCTACTGCAGCTCCTGCTTTTTGC...GAGACCTGGGGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAAAGGGGTATCAAGAATaGCTCGAGGGGGAGATGGGT +
Preference number: 4 (lower is better)
Translates to: NAGEKGYQECLEGEMGEPKGYQE*LEGEMG
Trigger: ACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTT...TGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GGAGGCCCTTGGGATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAAGGGGTATCAAGAATaGCTCGAGGGGGAGATGGGT +
Preference number: 4 (lower is better)
Translates to: GGPWDLQSDECECPTSSPKGYQE*LEGEMG
Trigger: ACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTT...AGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATCCCAAGGGCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGGGCAAGGAGACTACTTaGCTTACTGTCATATTATTG +
Preference number: 4 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQGKETT*LTVILL
Trigger: CAATAATATGACAGTAAGGCAAGTAGTCTCCTTGCC...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGAAAAAGGTCTACTTATaGATGTGTAAAACCTGGCCC +
Preference number: 4 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQKKVYL*MCKTWP
Trigger: GGGCCAGGTTTTACACATCCATAAGTAGACCTTTTT...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000616863.4
CDS-3UTR CCA 90 bp GGCACAGTGGTGGGCACCTATAGTCCCAGCCTGTGCTCTTGGCTATTCAGGACCGGCTCTTTCAGTTCCTaGGACACTTTTTCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: GTVVGTYSPSLCSWLFRTGSFSS*DTFSPR
Trigger: TCTTGGAGAAAAAGTGTCCCAGGAACTGAAAGAGCC...GGTCCTGAATAGCCAAGAGCACAGGCTGGGACTATAGGTGCCCACCACTGTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS-3UTR CCA 90 bp AGAACAGCACTAGTGCCAAGGCTGAGAAACCCGGTCCTGGAGGGGGTGCTTTACGTCCAGAGTTGTCGCTaGGCAGGATGTAAATGTCAT +
Preference number: 4 (lower is better)
Translates to: RTALVPRLRNPVLEGVLYVQSCR*AGCKCH
Trigger: ATGACATTTACATCCTGCCCAGCGACAACTCTGGAC...GTAAAGCACCCCCTCCAGGACCGGGTTTCTCAGCCTTGGCACTAGTGCTGTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AGGACAGCCCCAACACAGAGAATGGTCAGAACAGCACTAGTGCCAAGGCTGAGACACAGTTGGAGACTCTaGGGGACTGACTTGTCCAGA +
Preference number: 4 (lower is better)
Translates to: RTAPTQRMVRTALVPRLRHSWRL*GTDLSR
Trigger: TCTGGACAAGTCAGTCCCCCAGAGTCTCCAACTGTG...TCTCAGCCTTGGCACTAGTGCTGTTCTGACCATTCTCTGTGTTGGGGCTGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CAGGGATGCTGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGACACAGTTGGAGACTCTaGGGGACTGACTTGTCCAGA +
Preference number: 4 (lower is better)
Translates to: QGCCHILLTQELTKSYQRHSWRL*GTDLSR
Trigger: TCTGGACAAGTCAGTCCCCCAGAGTCTCCAACTGTG...TCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCAGCATCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp TCCACAAGGCTCTCTTCCCTTGCGTTTATCTCCTTCTCACTCAGCAGCGTTTCTGGTGGCAGTGATATGTaGAAGCAAGGGAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: STRLSSLAFISFSLSSVSGGSDM*KQGSWG
Trigger: GCCCCAGCTCCCTTGCTTCCACATATCACTGCCACC...AGAAACGCTGCTGAGTGAGAAGGAGATAAACGCAAGGGAAGAGAGCCTTGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp AGAAGTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGGTGGCAGTGATATGTaGAAGCAAGGGAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: RSPQLSQSVPQMSRQLLEGGSDM*KQGSWG
Trigger: GCCCCAGCTCCCTTGCTTCCACATATCACTGCCACC...CTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGACTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp TCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCAGGTGGCAGTGATATGTaGAAGCAAGGGAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: SPIIPECSTNVQTAAGGSGGSDM*KQGSWG
Trigger: GCCCCAGCTCCCTTGCTTCCACATATCACTGCCACC...TGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp TCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGTCAGCAGCGTTTCTGTaGGTTCCAGTGCGGGGACCA +
Preference number: 4 (lower is better)
Translates to: SDECECPTSSPNMPNMPLSAAFL*VPVRGP
Trigger: TGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGA...CAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTCAGCAGCGTTTCTGTaGGTTCCAGTGCGGGGACCA +
Preference number: 4 (lower is better)
Translates to: SQMNVNAPPQALTCLTCHSAAFL*VPVRGP
Trigger: TGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGA...GTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATCGGGCTTCTTCTCGCTaGCAGGGGACAGCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: QSVPQMSRQLLEVQIPANRASSR*QGTALP
Trigger: TGGAAGAGCTGTCCCCTGCCAGCGAGAAGAAGCCCG...ATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTCCAGGGCTACCCCGATaGCCACTGCCAGGATGGCAA +
Preference number: 4 (lower is better)
Translates to: KCPDSCWRFKFQPIQLQPPGLPR*PLPGWQ
Trigger: TTGCCATCCTGGCAGTGGCCATCGGGGTAGCCCTGG...AGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GAAATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACGAACCTGGCTTCGATTaGTGCTTGAATGCGCTCAGC +
Preference number: 4 (lower is better)
Translates to: EMQVRRGIKNASRGRWVNEPGFD*CLNALS
Trigger: GCTGAGCGCATTCAAGCACCAATCGAAGCCAGGTTC...GTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CAGGGATGCTGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAGAACCTGGCTTCGATTaGTGCTTGAATGCGCTCAGC +
Preference number: 4 (lower is better)
Translates to: QGCCHILLTQELTKSYQREPGFD*CLNALS
Trigger: GCTGAGCGCATTCAAGCACCAATCGAAGCCAGGTTC...TCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCAGCATCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CACTCAGCAGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTATTCTTTCCTTTCGTaGGCAACACAGGCTCCAATT +
Preference number: 4 (lower is better)
Translates to: HSAAFLWVPVRGPPPPLQYSFLS*ATQAPI
Trigger: AATTGGAGCCTGTGTTGCCCACGAAAGGAAAGAATA...CTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp GGAGCTGCAGTAGGAAGCAGTCCTCATGAGGGCTGTTCCCTTCCACTGCTGGAGACCGTGAAATACAACTaGCCAAATCACTGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: GAAVGSSPHEGCSLPLLETVKYN*PNHCGG
Trigger: TCCTCCACAGTGATTTGGCCAGTTGTATTTCACGGT...CTCCAGCAGTGGAAGGGAACAGCCCTCATGAGGACTGCTTCCTACTGCAGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCATGGAGGTGGAAGGAATaGCCTCCTACTATCAGCTCC +
Preference number: 4 (lower is better)
Translates to: NAGEKGYQECLEGEMGEPWRWKE*PPTISS
Trigger: GGAGCTGATAGTAGGAGGCCATTCCTTCCACCTCCA...TGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AGAACAGCACTAGTGCCAAGGCTGAGAAACCCGGTCCTGGAGGGGGTGCTTTACGGTATAAGTTGGAGGTaGAAGGAATGGCCTCCTACT +
Preference number: 4 (lower is better)
Translates to: RTALVPRLRNPVLEGVLYGISWR*KEWPPT
Trigger: AGTAGGAGGCCATTCCTTCCACCTCCAACTTATACC...GTAAAGCACCCCCTCCAGGACCGGGTTTCTCAGCCTTGGCACTAGTGCTGTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp TGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGGCCTCGAGGGGGAGATaGGTGAACCAGAAGGTCAAC +
Preference number: 4 (lower is better)
Translates to: CHILLTQELTKSYQRKPMASRGR*VNQKVN
Trigger: GTTGACCTTCTGGTTCACCCATCTCCCCCTCGAGGC...CATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCACAAGCAGTCTTCCATTaGGCTTTCTGGATTGGCAGG +
Preference number: 4 (lower is better)
Translates to: NAGEKGYQECLEGEMGEPQAVFH*AFWIGR
Trigger: CCTGCCAATCCAGAAAGCTCAATGGAAGACTGCTTG...TGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CAATGTCTAGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATTTCCAGCCGCTGGCATaGACTGTGGTCTCCAGTGTA +
Preference number: 4 (lower is better)
Translates to: QCLETFSFVISGRGCHWHFQPLA*TVVSSV
Trigger: TACACTGGAGACCACAGTTCATGCCAGCGGCTGGAA...ATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCTAGACATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317582.10
ENST00000498133.5
ENST00000543133.5
ENST00000611738.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AGGACAGCCCCAACACAGAGAATGGTCAGAACAGCACTAGTGCCAAGGCTGAGAGCGCTCAAAGGTTCTTaGCCACGTCTTGTCAATTCC +
Preference number: 4 (lower is better)
Translates to: RTAPTQRMVRTALVPRLRALKGS*PRLVNS
Trigger: GGAATTGACAAGACGTGGTCAAGAACCTTTGAGCGC...TCTCAGCCTTGGCACTAGTGCTGTTCTGACCATTCTCTGTGTTGGGGCTGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000618481.4
CDS-3UTR TCA 90 bp TCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCACCCCAGCCACCTTGCTaGATGATGTACTCTGCCGAA +
Preference number: 4 (lower is better)
Translates to: SPIIPECSTNVQTAAGGSPQPPC*MMYSAE
Trigger: TTCGGCAGAGTACATCATTCAGCAAGGTGGCTGGGG...TGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000618481.4
CDS-3UTR TCA 90 bp AGAAGTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGCCCCAGCCACCTTGCTaGATGATGTACTCTGCCGAA +
Preference number: 4 (lower is better)
Translates to: RSPQLSQSVPQMSRQLLEPQPPC*MMYSAE
Trigger: TTCGGCAGAGTACATCATTCAGCAAGGTGGCTGGGG...CTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGACTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000618481.4
CDS-3UTR TCA 90 bp GCTCAGCCAATGGGTGTGAGGATCCAGAACTGGCAAGTGTTAATACTGGAACTCCCCCAGCCACCTTGCTaGATGATGTACTCTGCCGAA +
Preference number: 4 (lower is better)
Translates to: AQPMGVRIQNWQVLILELPQPPC*MMYSAE
Trigger: TTCGGCAGAGTACATCATTCAGCAAGGTGGCTGGGG...GAGTTCCAGTATTAACACTTGCCAGTTCTGGATCCTCACACCCATTGGCTGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000618481.4
CDS-3UTR TCA 90 bp CAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATGAGACTCTGGGGGACTaGCTTGTCCAGAGTTGTCGC +
Preference number: 4 (lower is better)
Translates to: QSVPQMSRQLLEVQIPANETLGD*LVQSCR
Trigger: GCGACAACTCTGGACAAGTCAGTCCCCCAGAGTCTC...ATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATGCAGGGAGGTGGCAGTaGTATGTGGAAGCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: QSVPQMSRQLLEVQIPANAGRWQ*YVEARE
Trigger: CTCCCTTGCTTCCACATATCACTGCCACCTCCCTGC...ATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AACAGCACTAGTGCCAAGGCTGAGAAACCCGGTCCTGGAGGGGGTGCTTTACCCTGGATTTCTCAACTGTaGTCACTTCTGTGTCAGGTT +
Preference number: 4 (lower is better)
Translates to: NSTSAKAEKPGPGGGALPWISQL*SLLCQV
Trigger: AACCTGACACAGAAGTGATCACAGTTGAGAAATCCA...GGGTAAAGCACCCCCTCCAGGACCGGGTTTCTCAGCCTTGGCACTAGTGCTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AGGTGGAGCTGCAGGAAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCTGGATTTCTCAACTGTaGTCACTTCTGTGTCAGGTT +
Preference number: 4 (lower is better)
Translates to: RWSCRKLRGLDRLSPEQAWISQL*SLLCQV
Trigger: AACCTGACACAGAAGTGATCACAGTTGAGAAATCCA...GGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTCCTGCAGCTCCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTATTCTCAATTTAGCATaGGCGGAGGCCCTTGGGATT +
Preference number: 4 (lower is better)
Translates to: GEKGYQECLEGEMGEPEGILNLA*AEALGI
Trigger: AATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAAT...ACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CTCCTTCTCACTCAGCAGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCGCTCATCGAGAAAGATaGAATTCTAAGGGGATTAAG +
Preference number: 4 (lower is better)
Translates to: LLLTQQRFCGFQCGDHLLAHRER*NSKGIK
Trigger: CTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGC...GAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGAGTGAGAAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp CTCTGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTCCCTGAGAGGCAGCTaGGAGTACGGGCGAGCACCC +
Preference number: 4 (lower is better)
Translates to: LCVHISKIPKGSIFTRWSSLRGS*EYGRAP
Trigger: GGGTGCTCGCCCGTACTCTCAGCTGCCTCTCAGGGA...GCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp TCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCGAACAGTGCAGTCCCTaGGAGGCAGCTGAGAGTACG +
Preference number: 4 (lower is better)
Translates to: STNVQTAAGGSNSSQYNSEQCSP*EAAEST
Trigger: CGTACTCTCAGCTGCCTCTCAGGGACTGCACTGTTC...GGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTGCAGGAACCTGGGGGTaGAGAGGAACAGTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: AAGGSNSSQYNSNLTSFCAGTWG*RGTVQS
Trigger: GGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGC...ACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GAATTAGAGGAGTTGTTCTCACTCTTCTCTCCAGCTCCGTTGCTGTCTAAGCTTGCAGGAACCTGGGGGTaGAGAGGAACAGTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: ELEELFSLFSPAPLLSKLAGTWG*RGTVQS
Trigger: GGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGC...AAGCTTAGACAGCAACGGAGCTGGAGAGAAGAGTGAGAACAACTCCTCTAATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp AAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTGCAGGAACCTGGGGGTaGAGAGGAACAGTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: KCPDSCWRFKFQPIQLQPAGTWG*RGTVQS
Trigger: GGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGC...AGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp TCCACAAGGCTCTCTTCCCTTGCGTTTATCTCCTTCTCACTCAGCAGCGTTTCTGAAGCTTCGGGGACTTaGCAGACTGAGTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: STRLSSLAFISFSLSSVSEASGT*QTESRA
Trigger: TGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTC...AGAAACGCTGCTGAGTGAGAAGGAGATAAACGCAAGGGAAGAGAGCCTTGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp GCTCAGCCAATGGGTGTGAGGATCCAGAACTGGCAAGTGTTAATACTGGAACTCGAAGCTTCGGGGACTTaGCAGACTGAGTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: AQPMGVRIQNWQVLILELEASGT*QTESRA
Trigger: TGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTC...GAGTTCCAGTATTAACACTTGCCAGTTCTGGATCCTCACACCCATTGGCTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp ATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATCTCAGCCAATGGGTGTaGGGATCCAGAACTGGCAAG +
Preference number: 4 (lower is better)
Translates to: MNVNAPPQALTCLTCHCHLSQWV*GSRTGK
Trigger: CTTGCCAGTTCTGGATCCTCACACCCATTGGCTGAG...ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CAATGTCTAGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTCAGCCAATGGGTGTaGGGATCCAGAACTGGCAAG +
Preference number: 4 (lower is better)
Translates to: QCLETFSFVISGRGCHWHLSQWV*GSRTGK
Trigger: CTTGCCAGTTCTGGATCCTCACACCCATTGGCTGAG...ATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCTAGACATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CAGAAGTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGCTTCGATTGGTGCTTaGATGCGCTCAGCCAATGGG +
Preference number: 4 (lower is better)
Translates to: QKSPIIPECSTNVQTAAGASIGA*MRSANG
Trigger: CCCATTGGCTGAGCGCATTCAAGCACCAATCGAAGC...TCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGACTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp TCCACAAGGCTCTCTTCCCTTGCGTTTATCTCCTTCTCACTCAGCAGCGTTTCTGCTTCGATTGGTGCTTaGATGCGCTCAGCCAATGGG +
Preference number: 4 (lower is better)
Translates to: STRLSSLAFISFSLSSVSASIGA*MRSANG
Trigger: CCCATTGGCTGAGCGCATTCAAGCACCAATCGAAGC...AGAAACGCTGCTGAGTGAGAAGGAGATAAACGCAAGGGAAGAGAGCCTTGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp AGAAGTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGCTTCGATTGGTGCTTaGATGCGCTCAGCCAATGGG +
Preference number: 4 (lower is better)
Translates to: RSPQLSQSVPQMSRQLLEASIGA*MRSANG
Trigger: CCCATTGGCTGAGCGCATTCAAGCACCAATCGAAGC...CTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGACTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CTTTCTGTGTGCCAACTCTGGCTAGCTGACAGTGACACAGGTAAGCTCTCAGACTCAGCAGCTCAGAGATaGACCTGGCTTCGATTGGTG +
Preference number: 4 (lower is better)
Translates to: LSVCQLWLADSDTGKLSDSAAQR*TWLRLV
Trigger: CACCAATCGAAGCCAGGTTCATCTCTGAGCTGCTGA...GTCTGAGAGCTTACCTGTGTCACTGTCAGCTAGCCAGAGTTGGCACACAGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp CTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCTTACTAGTTCCATTACCGTaGAATACAACTGGCCAAATC +
Preference number: 4 (lower is better)
Translates to: LRGLDRLSPEQALARGILLVPLP*NTTGQI
Trigger: GATTTGGCCAGTTGTATTTCACGGTAATGGAACTAG...TAAGATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GTGTCTGTTAGCAATCAGATAGCCTACAAGGCCGTCTTGATGGGTATGATCACCGCACACCGCAGGTACTaGCTGATTTCTGTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: VSVSNQIAYKAVLMGMITAHRRY*LISVGP
Trigger: TGGGCCCACAGAAATCAGTCAGTACCTGCGGTGTGC...GGTGATCATACCCATCAAGACGGCCTTGTAGGCTATCTGATTGCTAACAGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp TCTGTTAGCAATCAGATAGCCTACAAGGCCGTCTTGATGGGTATGATCACCACCGCACACCGCAGGTACTaGCTGATTTCTGTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: SVSNQIAYKAVLMGMITTAHRRY*LISVGP
Trigger: TGGGCCCACAGAAATCAGTCAGTACCTGCGGTGTGC...GGTGGTGATCATACCCATCAAGACGGCCTTGTAGGCTATCTGATTGCTAACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp TGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGCGAGGGGGAGATGGGTaGACCAGAAGGTCAACAGTT +
Preference number: 4 (lower is better)
Translates to: CHILLTQELTKSYQRKPMRGGDG*TRRSTV
Trigger: AACTGTTGACCTTCTGGTTCACCCATCTCCCCCTCG...CATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTCAAAGCCTGAGGAAATaGACAGTAGCTGTGGGTCAA +
Preference number: 4 (lower is better)
Translates to: GEKGYQECLEGEMGEPEGQSLRK*TVAVGQ
Trigger: TTGACCCACAGCTACTGTTCATTTCCTCAGGCTTTG...ACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp ATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATCTCTCCGTCCAGATGTaGCCTGAAGACCCAAACCCT +
Preference number: 4 (lower is better)
Translates to: MNVNAPPQALTCLTCHCHLSVQM*PEDPNP
Trigger: AGGGTTTGGGTCTTCAGGTCACATCTGGACGGAGAG...ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGGACTCTCCGTCCAGATGTaGCCTGAAGACCCAAACCCT +
Preference number: 4 (lower is better)
Translates to: PHPVNSGADQELPEKANGLSVQM*PEDPNP
Trigger: AGGGTTTGGGTCTTCAGGTCACATCTGGACGGAGAG...TCCATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GTGAACCAGAAGGTCAACAGTTGCATTTCTTCATCTAGAATGTTCTCTAGAAGGCGCCATGTTGGAGGGTaGGGTCACCCCGGCGTGCCT +
Preference number: 4 (lower is better)
Translates to: VNQKVNSCISSSRMFSRRRHVGG*GHPGVP
Trigger: AGGCACGCCGGGGTGACCTCACCCTCCAACATGGCG...CCTTCTAGAGAACATTCTAGATGAAGAAATGCAACTGTTGACCTTCTGGTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CTCTTCTCTCCAGCTCCGTTGCTGTCTAAGCTTTTCACTTCTTCAGGATCCATTCCTGGCCCTGGCCCCTaGCCCAGAAGAGATGAAAGA +
Preference number: 4 (lower is better)
Translates to: LFSPAPLLSKLFTSSGSIPGPGP*PRRDER
Trigger: TCTTTCATCTCTTCTGGGGCAGGGGCCAGGGCCAGG...AATGGATCCTGAAGAAGTGAAAAGCTTAGACAGCAACGGAGCTGGAGAGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp GCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCCTGGCCCTGGCCCCTaGCCCAGAAGAGATGAAAGA +
Preference number: 4 (lower is better)
Translates to: AAGGSNSSQYNSNLTSFCPGPGP*PRRDER
Trigger: TCTTTCATCTCTTCTGGGGCAGGGGCCAGGGCCAGG...ACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTTGGCTCAGGAGCATTTaGAATGCTTTATGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: GEKGYQECLEGEMGEPEGWLRSI*NALWRG
Trigger: GCCTCTCCATAAAGCATTGCAAATGCTCCTGAGCCA...ACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCATATGTCACGCCAAACTaGAGCAGTGCGCTCAAAGGT +
Preference number: 4 (lower is better)
Translates to: NAGEKGYQECLEGEMGEPYVTPN*SSALKG
Trigger: ACCTTTGAGCGCACTGCTGCAGTTTGGCGTGACATA...TGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000618481.4
CDS-3UTR GCA 90 bp GAAATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACTATGTCACGCCAAACTaGAGCAGTGCGCTCAAAGGT +
Preference number: 4 (lower is better)
Translates to: EMQVRRGIKNASRGRWVNYVTPN*SSALKG
Trigger: ACCTTTGAGCGCACTGCTGCAGTTTGGCGTGACATA...GTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000618481.4
CDS-3UTR GCA 90 bp AGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGGGTAAGCTCTCAGACTaGCAGGAAGTGGTCACAGTT +
Preference number: 4 (lower is better)
Translates to: RDIFVCHLWEGVPLASSGGKLSD*QEVVTV
Trigger: AACTGTGACCACTTCCTGGCAGTCTGAGAGCTTACC...CCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATGTTGAGGGTAAGCTCTCAGACTaGCAGGAAGTGGTCACAGTT +
Preference number: 4 (lower is better)
Translates to: VNAPPQALTCLTCHCHVEGKLSD*QEVVTV
Trigger: AACTGTGACCACTTCCTGGCAGTCTGAGAGCTTACC...CTCAACATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CTCAGAGATGAACCTGGCTTCGATTGGTGCTTGAATGCGCTCAGCCAATGGGTGGGTAAGCTCTCAGACTaGCAGGAAGTGGTCACAGTT +
Preference number: 4 (lower is better)
Translates to: LRDEPGFDWCLNALSQWVGKLSD*QEVVTV
Trigger: AACTGTGACCACTTCCTGGCAGTCTGAGAGCTTACC...CACCCATTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGGTTCATCTCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AGAAGTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGGCAGGCTTTCTGTGTaGCAACTCTGGCTAGCTGAC +
Preference number: 4 (lower is better)
Translates to: RSPQLSQSVPQMSRQLLEGRLSV*QLWLAD
Trigger: GTCAGCTAGCCAGAGTTGGCACACAGAAAGCCTGCC...CTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGACTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CAGAAGTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGATCCATTGCAATCTaGTGCCAGGACTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: QKSPIIPECSTNVQTAAGGSIAI*CQDSGP
Trigger: AGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCC...TCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGACTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CAATGTCTAGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATGGATCCATTGCAATCTaGTGCCAGGACTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: QCLETFSFVISGRGCHWHGSIAI*CQDSGP
Trigger: AGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCC...ATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCTAGACATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TCCATTGCAATCTGCTGCCAGGACTCAGGGCCTAGTGACACTGGCAGGCTTTCTTTCTTCAGGATCCATTaGAATCTGCTGCCAGGACTC +
Preference number: 4 (lower is better)
Translates to: SIAICCQDSGPSDTGRLSFFRIH*NLLPGL
Trigger: GAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAA...AGAAAGCCTGCCAGTGTCACTAGGCCCTGAGTCCTGGCAGCAGATTGCAATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp CGCCCGTGGGATCTTAGCAGGAACCTGGGGGTGAAGAGGAACAGTGCAGTCCCTTCTTCTTTCTCCACGTaGACAATGTCAGAATTAGAG +
Preference number: 4 (lower is better)
Translates to: RPWDLSRNLGVKRNSAVPSSFST*TMSELE
Trigger: CTCTAATTCTGACATTGTGCACGTGGAGAAAGAAGA...AGGGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGCTAAGATCCCACGGGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GTGGAGGAATGTCTAACAGGTGGGAAAATAAAGCAGCAAGTAGCCGCTTCCATATCAGGAAGTGCCTCTTaGAGCTCCCGCGCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: VEECLTGGKIKQQVAASISGSAS*SSRAGK
Trigger: CTTGCCAGCGCGGGAGCTGCAAGAGGCACTTCCTGA...TATGGAAGCGGCTACTTGCTGCTTTATTTTCCCACCTGTTAGACATTCCTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CTCTTCTCTCCAGCTCCGTTGCTGTCTAAGCTTTTCACTTCTTCAGGATCCATTTCAGGAAGTGCCTCTTaGAGCTCCCGCGCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: LFSPAPLLSKLFTSSGSISGSAS*SSRAGK
Trigger: CTTGCCAGCGCGGGAGCTGCAAGAGGCACTTCCTGA...AATGGATCCTGAAGAAGTGAAAAGCTTAGACAGCAACGGAGCTGGAGAGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp TTCTCCACGTGCACAATGTCAGAATTAGAGGAGTTGTTCTCACTCTTCTCTCCATGGGGCTTCAGGAAGTaGCTCTTGCAGCTCCCGCGC +
Preference number: 4 (lower is better)
Translates to: FSTCTMSELEELFSLFSPWGFRK*LLQLPR
Trigger: GCGCGGGAGCTGCAAGAGGCACTTCCTGAAGCCCCA...TGGAGAGAAGAGTGAGAACAACTCCTCTAATTCTGACATTGTGCACGTGGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp GTGCAGAGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGTGGGGCTTCAGGAAGTaGCTCTTGCAGCTCCCGCGC +
Preference number: 4 (lower is better)
Translates to: VQSLLIEKDEILRGLRAKWGFRK*LLQLPR
Trigger: GCGCGGGAGCTGCAAGAGGCACTTCCTGAAGCCCCA...CTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCTCTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AGGTGGAGCTGCAGGAAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCAGGTTCAGTTGTTGCTaGTTTCACCTCTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: RWSCRKLRGLDRLSPEQARFSCC*FHLFFI
Trigger: GATGAAGAAGAGGTGAAAGCAGCAACAACTGAACCT...GGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTCCTGCAGCTCCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CTCCAGCTCCGTTGCTGTCTAAGCTTTTCACTTCTTCAGGATCCATTGCAATCTTTCTGTGGGTTCCAGTaGGGGGACCACCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: LQLRCCLSFSLLQDPLQSFCGFQ*GDHLLH
Trigger: GTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAA...AGATTGCAATGGATCCTGAAGAAGTGAAAAGCTTAGACAGCAACGGAGCTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp GTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTTTCTGTGGGTTCCAGTaGGGGGACCACCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: VPQMSRQLLEVQIPANTTFCGFQ*GDHLLH
Trigger: GTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAA...AGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACTACCCCGATGGCCACTaGCAGGATGGCAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: DLQSDECECPTSSPNMPNYPDGH*QDGNSS
Trigger: GCTGCTGTTGCCATCCTGGCAGTGGCCATCGGGGTA...GTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTCTAACATGCCTAACATaGCACTGCCATGTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: GEKGYQECLEGEMGEPEGLTCLT*HCHVEQ
Trigger: CTGCTCAACATGGCAGTGGCATGTTAGGCATGTTAG...ACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CAATGTCTAGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCGGTCCTGGAGGGGGTaGTTTACCCCTAAGATTCTC +
Preference number: 4 (lower is better)
Translates to: QCLETFSFVISGRGCHWHRSWRG*FTPKIL
Trigger: GAGAATCTTAGGGGTAAAGCACCCCCTCCAGGACCG...ATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCTAGACATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CTCTCTAGCCAGAGTTACTTGCAGTTGCACTCACAAGTGGGGACCCCAGGTCTCAGTGGGTGCAGAGCCTaGTCATCGAGAAAGATGAAA +
Preference number: 4 (lower is better)
Translates to: LSSQSYLQLHSQVGTPGLSGCRA*SSRKMK
Trigger: TTTCATCTTTCTCGATGAGCAGGCTCTGCACCCACT...GAGACCTGGGGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATGTTGAGAGAGTTACTTGCAGTTaGACTCACAAGTGGGGACCC +
Preference number: 4 (lower is better)
Translates to: VNAPPQALTCLTCHCHVERVTCS*THKWGP
Trigger: GGGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCT...CTCAACATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCTTAGATAACGCACCAGTTTaGTCTTCACCTATGCAAACA +
Preference number: 4 (lower is better)
Translates to: LRGLDRLSPEQALARGILDNAPV*SSPMQT
Trigger: TGTTTGCATAGGTGAAGAGCAAACTGGTGCGTTATC...TAAGATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CTCTCTAGCCAGAGTTACTTGCAGTTGCACTCACAAGTGGGGACCCCAGGTCTCGAAGAACAGGGATGCTaGCACATCCTGTTAACTCAG +
Preference number: 4 (lower is better)
Translates to: LSSQSYLQLHSQVGTPGLEEQGC*HILLTQ
Trigger: CTGAGTTAACAGGATGTGGCAGCATCCCTGTTCTTC...GAGACCTGGGGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AGCCTCCTATTTCTTTCTCAGAGCCAGGGCTACCCCGATGGCCACTGCCAGGATAAGGAAGAACAGGGATaGTGCCACATCCTGTTAACT +
Preference number: 4 (lower is better)
Translates to: SLLFLSQSQGYPDGHCQDKEEQG*CHILLT
Trigger: AGTTAACAGGATGTGGCAGCATCCCTGTTCTTCCTT...ATCCTGGCAGTGGCCATCGGGGTAGCCCTGGCTCTGAGAAAGAAATAGGAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp GTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATGTTGAGGCAAAAAGCAGGAGCTaGAGTAGGAAGCAGTCCTCA +
Preference number: 4 (lower is better)
Translates to: VNAPPQALTCLTCHCHVEAKSRS*SRKQSS
Trigger: TGAGGACTGCTTCCTACTGCAGCTCCTGCTTTTTGC...CTCAACATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GGCACAGTGGTGGGCACCTATAGTCCCAGCCTGTGCTCTTGGCTATTCAGGACCATGCCACGATGGTCGTaGTTTCTGATGAAACAGAAT +
Preference number: 4 (lower is better)
Translates to: GTVVGTYSPSLCSWLFRTMPRWS*FLMKQN
Trigger: ATTCTGTTTCATCAGAAAGCACGACCATCGTGGCAT...GGTCCTGAATAGCCAAGAGCACAGGCTGGGACTATAGGTGCCCACCACTGTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS-3UTR CCA 90 bp AAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCAAAAAGGTCTACTTATaGATGTGTAAAACCTGGCCC +
Preference number: 4 (lower is better)
Translates to: KLRGLDRLSPEQALARGIKKVYL*MCKTWP
Trigger: GGGCCAGGTTTTACACATCCATAAGTAGACCTTTTT...GATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000616863.4
CDS-3UTR CCA 90 bp TCTCTTCTGAAAAGCCTCCTATTTCTTTCTCAGAGCCAGGGCTACCCCGATGGCGGCAGGGCTGAACACTaGAGAAGTGTGACGGTCAAA +
Preference number: 4 (lower is better)
Translates to: SLLKSLLFLSQSQGYPDGGRAEH*RSVTVK
Trigger: TTTGACCGTCACACTTCTCCAGTGTTCAGCCCTGCC...GCCATCGGGGTAGCCCTGGCTCTGAGAAAGAAATAGGAGGCTTTTCAGAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355028.4
CDS-3UTR CCA 90 bp GGAGGCCCTTGGGATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTTGCCTGATATGTCACTaGCTGGCTCAGGAGCATTTG +
Preference number: 4 (lower is better)
Translates to: GGPWDLQSDECECPTSSPCLICH*LAQEHL
Trigger: CAAATGCTCCTGAGCCAGCCAGTGACATATCAGGCA...AGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATCCCAAGGGCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317582.10
ENST00000611738.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GCTCAGCCAATGGGTGTGAGGATCCAGAACTGGCAAGTGTTAATACTGGAACTCGGAAGTGGTCACAGTTaGAGACTCTGGGGGACTGAC +
Preference number: 4 (lower is better)
Translates to: AQPMGVRIQNWQVLILELGSGHS*RLWGTD
Trigger: GTCAGTCCCCCAGAGTCTCCAACTGTGACCACTTCC...GAGTTCCAGTATTAACACTTGCCAGTTCTGGATCCTCACACCCATTGGCTGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CAGGGATGCTGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGATCTGTGTGCCAACTCTaGCTAGCTGACAGTGACACA +
Preference number: 4 (lower is better)
Translates to: QGCCHILLTQELTKSYQRSVCQL*LADSDT
Trigger: TGTGTCACTGTCAGCTAGCCAGAGTTGGCACACAGA...TCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCAGCATCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATGTTGAGTCTGTGTGCCAACTCTaGCTAGCTGACAGTGACACA +
Preference number: 4 (lower is better)
Translates to: VNAPPQALTCLTCHCHVESVCQL*LADSDT
Trigger: TGTGTCACTGTCAGCTAGCCAGAGTTGGCACACAGA...CTCAACATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTCTGTGTGCCAACTCTaGCTAGCTGACAGTGACACA +
Preference number: 4 (lower is better)
Translates to: RDIFVCHLWEGVPLASSGSVCQL*LADSDT
Trigger: TGTGTCACTGTCAGCTAGCCAGAGTTGGCACACAGA...CCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GAATTAGAGGAGTTGTTCTCACTCTTCTCTCCAGCTCCGTTGCTGTCTAAGCTTTTGCAGCTCCCGCGCTaGCAAGACCACAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: ELEELFSLFSPAPLLSKLLQLPR*QDHRSH
Trigger: GTGGCTTCTGTGGTCTTGCCAGCGCGGGAGCTGCAA...AAGCTTAGACAGCAACGGAGCTGGAGAGAAGAGTGAGAACAACTCCTCTAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp CTATCCCAATTCTTCCTAAGTAAACCCTCTCTCGCTAAAGCAGTGGGTCTCAATCCTCAGACAGCGGCATaGGCTTCATCTCACCGGCGG +
Preference number: 4 (lower is better)
Translates to: LSQFFLSKPSLAKAVGLNPQTAA*ASSHRR
Trigger: CCGCCGGTGAGATGAAGCCCATGCCGCTGTCTGAGG...ATTGAGACCCACTGCTTTAGCGAGAGAGGGTTTACTTAGGAAGAATTGGGATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CTAACAGGTGGGAAAATAAAGCAGCAAGTAGCCGCTTCCATACCACATTTCTTCCCTCAGACAGCGGCATaGGCTTCATCTCACCGGCGG +
Preference number: 4 (lower is better)
Translates to: LTGGKIKQQVAASIPHFFPQTAA*ASSHRR
Trigger: CCGCCGGTGAGATGAAGCCCATGCCGCTGTCTGAGG...GAAGAAATGTGGTATGGAAGCGGCTACTTGCTGCTTTATTTTCCCACCTGTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AGGACAGCCCCAACACAGAGAATGGTCAGAACAGCACTAGTGCCAAGGCTGAGATGTCCAGACAGCTGCTaGAGGTTCAAATTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: RTAPTQRMVRTALVPRLRCPDSC*RFKFQP
Trigger: TGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACA...TCTCAGCCTTGGCACTAGTGCTGTTCTGACCATTCTCTGTGTTGGGGCTGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CAACTCTGGCTAGCTGACAGTGACACAGGTAAGCTCTCAGACTGCCAGGAAGTGTGTCCAGACAGCTGCTaGAGGTTCAAATTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: QLWLADSDTGKLSDCQEVCPDSC*RFKFQP
Trigger: TGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACA...CACTTCCTGGCAGTCTGAGAGCTTACCTGTGTCACTGTCAGCTAGCCAGAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp CTCCTTCTCACTCAGCAGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCGGAATGTCTAACAGGTaGGAAAATAAAGCAGCAAGT +
Preference number: 4 (lower is better)
Translates to: LLLTQQRFCGFQCGDHLLGMSNR*ENKAAS
Trigger: ACTTGCTGCTTTATTTTCCCACCTGTTAGACATTCC...GAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGAGTGAGAAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp AGAACAGCACTAGTGCCAAGGCTGAGAAACCCGGTCCTGGAGGGGGTGCTTTACACCGTGAAATACAACTaGCCAAATCACTGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: RTALVPRLRNPVLEGVLYTVKYN*PNHCGG
Trigger: TCCTCCACAGTGATTTGGCCAGTTGTATTTCACGGT...GTAAAGCACCCCCTCCAGGACCGGGTTTCTCAGCCTTGGCACTAGTGCTGTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CGCCCGTGGGATCTTAGCAGGAACCTGGGGGTGAAGAGGAACAGTGCAGTCCCTACCAGAGAAAGCCAATaGAAAACACTATCTAGTTCC +
Preference number: 4 (lower is better)
Translates to: RPWDLSRNLGVKRNSAVPTRESQ*KTLSSS
Trigger: GGAACTAGATAGTGTTTTCCATTGGCTTTCTCTGGT...AGGGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGCTAAGATCCCACGGGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp ACTTCTTCAGGATCCATTGCAATCTGCTGCCAGGACTCAGGGCCTAGTGACACTTGGAGGTGGAAGGAATaGCCTCCTACTATCAGCTCC +
Preference number: 4 (lower is better)
Translates to: TSSGSIAICCQDSGPSDTWRWKE*PPTISS
Trigger: GGAGCTGATAGTAGGAGGCCATTCCTTCCACCTCCA...AGTGTCACTAGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp CAGGGATGCTGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGATGCATCTGGTATCCCTaGGACAGAAATGCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: QGCCHILLTQELTKSYQRCIWYP*DRNAGE
Trigger: CTCACCTGCATTTCTGTCCCAGGGATACCAGATGCA...TCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCAGCATCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCATGCATCTGGTATCCCTaGGACAGAAATGCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: NAGEKGYQECLEGEMGEPCIWYP*DRNAGE
Trigger: CTCACCTGCATTTCTGTCCCAGGGATACCAGATGCA...TGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGGTAGTGGCTGCATCTaGTATCCCTGGGACAGAAAT +
Preference number: 4 (lower is better)
Translates to: NAGEKGYQECLEGEMGEPGSGCI*YPWDRN
Trigger: ATTTCTGTCCCAGGGATACCAGATGCAGCCACTACC...TGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTTCAGTTGTTGCTGCTGGAGTCCCAAGTAGCTaGGAACAACATACTTTGTTT +
Preference number: 4 (lower is better)
Translates to: GSSAGTTSSTSVGSVVAAGVPSS*EQHTLF
Trigger: AAACAAAGTATGTTGTTCTCAGCTACTTGGGACTCC...AGCAGCAACAACTGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp GGAGGCCCTTGGGATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTGAAGCTATATCTAGTTaGACCCCTTGGGGTGAGGAA +
Preference number: 4 (lower is better)
Translates to: GGPWDLQSDECECPTSSPEAISS*TPWGEE
Trigger: TTCCTCACCCCAAGGGGTTCAACTAGATATAGCTTC...AGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATCCCAAGGGCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000498133.5
ENST00000543133.5
ENST00000616863.4
CDS-3UTR TCA 90 bp TCCATTGCAATCTGCTGCCAGGACTCAGGGCCTAGTGACACTGGCAGGCTTTCTCAAAGCCTGTGCTGGTaGAGGCTTCAGAAATTTCTT +
Preference number: 4 (lower is better)
Translates to: SIAICCQDSGPSDTGRLSQSLCW*RLQKFL
Trigger: AAGAAATTTCTGAAGCCTTCACCAGCACAGGCTTTG...AGAAAGCCTGCCAGTGTCACTAGGCCCTGAGTCCTGGCAGCAGATTGCAATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355028.4
CDS-3UTR TCA 90 bp TGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGCATTCCCGAAATGCCTaGTATGTCACTGGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: CHILLTQELTKSYQRKPMHSRNA*YVTGWL
Trigger: GAGCCAGCCAGTGACATATCAGGCATTTCGGGAATG...CATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317582.10
ENST00000611738.4
ENST00000618481.4
CDS-3UTR TCA 90 bp TCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCATTCCCGAAATGCCTaGTATGTCACTGGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: SDECECPTSSPNMPNMPLHSRNA*YVTGWL
Trigger: GAGCCAGCCAGTGACATATCAGGCATTTCGGGAATG...CAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317582.10
ENST00000611738.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATTTCCAGCCGCTGGCATaGACTGTGGTCTCCAGTGTA +
Preference number: 4 (lower is better)
Translates to: QSVPQMSRQLLEVQIPANFQPLA*TVVSSV
Trigger: TACACTGGAGACCACAGTTCATGCCAGCGGCTGGAA...ATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317582.10
ENST00000498133.5
ENST00000543133.5
ENST00000611738.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CAGGGATGCTGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAGCCACCTTGCTGAATaGTGTACTCTGCCGAATAGT +
Preference number: 4 (lower is better)
Translates to: QGCCHILLTQELTKSYQRSHLAE*CTLPNS
Trigger: ACTATTCGGCAGAGTACATCATTCAGCAAGGTGGCT...TCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCAGCATCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000618481.4
CDS-3UTR TCA 90 bp CTCAGAGATGAACCTGGCTTCGATTGGTGCTTGAATGCGCTCAGCCAATGGGTGTGCTATCTTCTGCAGTaGTTCCAGGGTATTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LRDEPGFDWCLNALSQWVCYLLQ*FQGIPP
Trigger: AGGAGGAATACCCTGGAATCACTGCAGAAGATAGCA...CACCCATTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGGTTCATCTCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTGAGACTCTGGGGGACTaGCTTGTCCAGAGTTGTCGC +
Preference number: 4 (lower is better)
Translates to: VPQMSRQLLEVQIPANTTETLGD*LVQSCR
Trigger: GCGACAACTCTGGACAAGTCAGTCCCCCAGAGTCTC...AGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTGAGACTCTGGGGGACTaGCTTGTCCAGAGTTGTCGC +
Preference number: 4 (lower is better)
Translates to: RQLLEVQIPANTTPTLHPETLGD*LVQSCR
Trigger: GCGACAACTCTGGACAAGTCAGTCCCCCAGAGTCTC...AGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GAATTAGAGGAGTTGTTCTCACTCTTCTCTCCAGCTCCGTTGCTGTCTAAGCTTGAGACTCTGGGGGACTaGCTTGTCCAGAGTTGTCGC +
Preference number: 4 (lower is better)
Translates to: ELEELFSLFSPAPLLSKLETLGD*LVQSCR
Trigger: GCGACAACTCTGGACAAGTCAGTCCCCCAGAGTCTC...AAGCTTAGACAGCAACGGAGCTGGAGAGAAGAGTGAGAACAACTCCTCTAATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp TGCTGTCTAAGCTTTTCACTTCTTCAGGATCCATTGCAATCTGCTGCCAGGACTGCAGGGAGGTGGCAGTaGTATGTGGAAGCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: CCLSFSLLQDPLQSAARTAGRWQ*YVEARE
Trigger: CTCCCTTGCTTCCACATATCACTGCCACCTCCCTGC...AGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGTGAAAAGCTTAGACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp AATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAATGCCACTGCCATGTTaGGCAGAAGTCCCCAATTAT +
Preference number: 4 (lower is better)
Translates to: NAGEKGYQECLEGEMGEPMPLPC*AEVPNY
Trigger: ATAATTGGGGACTTCTGCTCAACATGGCAGTGGCAT...TGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGATGCCACTGCCATGTTaGGCAGAAGTCCCCAATTAT +
Preference number: 4 (lower is better)
Translates to: RDIFVCHLWEGVPLASSGMPLPC*AEVPNY
Trigger: ATAATTGGGGACTTCTGCTCAACATGGCAGTGGCAT...CCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGATTCTCAATTTAGCATaGGCGGAGGCCCTTGGGATT +
Preference number: 4 (lower is better)
Translates to: RDIFVCHLWEGVPLASSGILNLA*AEALGI
Trigger: AATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAAT...CCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CTCAGAGATGAACCTGGCTTCGATTGGTGCTTGAATGCGCTCAGCCAATGGGTGATTCTCAATTTAGCATaGGCGGAGGCCCTTGGGATT +
Preference number: 4 (lower is better)
Translates to: LRDEPGFDWCLNALSQWVILNLA*AEALGI
Trigger: AATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAAT...CACCCATTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGGTTCATCTCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTGAACAGTGCAGTCCCTaGGAGGCAGCTGAGAGTACG +
Preference number: 4 (lower is better)
Translates to: RQLLEVQIPANTTPTLHPEQCSP*EAAEST
Trigger: CGTACTCTCAGCTGCCTCTCAGGGACTGCACTGTTC...AGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTGAACAGTGCAGTCCCTaGGAGGCAGCTGAGAGTACG +
Preference number: 4 (lower is better)
Translates to: VPQMSRQLLEVQIPANTTEQCSP*EAAEST
Trigger: CGTACTCTCAGCTGCCTCTCAGGGACTGCACTGTTC...AGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTGCAGGAACCTGGGGGTaGAGAGGAACAGTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: AGGSNSSQYNSNLTSFCLAGTWG*RGTVQS
Trigger: GGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGC...AAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GATTCTCAATTTAGCATGAGCGGAGGCCCTTGGGATTTACAGTCAGATGAATGTGCAGGAACCTGGGGGTaGAGAGGAACAGTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: DSQFSMSGGPWDLQSDECAGTWG*RGTVQS
Trigger: GGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGC...ACATTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CTATCCCAATTCTTCCTAAGTAAACCCTCTCTCGCTAAAGCAGTGGGTCTCAATGCAGGAACCTGGGGGTaGAGAGGAACAGTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: LSQFFLSKPSLAKAVGLNAGTWG*RGTVQS
Trigger: GGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGC...ATTGAGACCCACTGCTTTAGCGAGAGAGGGTTTACTTAGGAAGAATTGGGATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp TCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCGAAGCTTCGGGGACTTaGCAGACTGAGTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: STNVQTAAGGSNSSQYNSEASGT*QTESRA
Trigger: TGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTC...GGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp TCTGTTAGCAATCAGATAGCCTACAAGGCCGTCTTGATGGGTATGATCACCACCGCTTCGATTGGTGCTTaGATGCGCTCAGCCAATGGG +
Preference number: 4 (lower is better)
Translates to: SVSNQIAYKAVLMGMITTASIGA*MRSANG
Trigger: CCCATTGGCTGAGCGCATTCAAGCACCAATCGAAGC...GGTGGTGATCATACCCATCAAGACGGCCTTGTAGGCTATCTGATTGCTAACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp ATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATTCAGCAGCTCAGAGATaGACCTGGCTTCGATTGGTG +
Preference number: 4 (lower is better)
Translates to: MNVNAPPQALTCLTCHCHSAAQR*TWLRLV
Trigger: CACCAATCGAAGCCAGGTTCATCTCTGAGCTGCTGA...ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTTCACTAGTTCCATTACCGTaGAATACAACTGGCCAAATC +
Preference number: 4 (lower is better)
Translates to: SVSVGSSAGTTSSTSVGSLVPLP*NTTGQI
Trigger: GATTTGGCCAGTTGTATTTCACGGTAATGGAACTAG...TGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp AAGCTTTTCACTTCTTCAGGATCCATTGCAATCTGCTGCCAGGACTCAGGGCCTACCGCAGGTACTGACTaGTTTCTGTGGGCCCAGAAT +
Preference number: 4 (lower is better)
Translates to: KLFTSSGSIAICCQDSGPTAGTD*FLWAQN
Trigger: ATTCTGGGCCCACAGAAATCAGTCAGTACCTGCGGT...AGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGTGAAAAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp ATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATACCGCAGGTACTGACTaGTTTCTGTGGGCCCAGAAT +
Preference number: 4 (lower is better)
Translates to: MNVNAPPQALTCLTCHCHTAGTD*FLWAQN
Trigger: ATTCTGGGCCCACAGAAATCAGTCAGTACCTGCGGT...ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GCTCAGCCAATGGGTGTGAGGATCCAGAACTGGCAAGTGTTAATACTGGAACTCACCGCAGGTACTGACTaGTTTCTGTGGGCCCAGAAT +
Preference number: 4 (lower is better)
Translates to: AQPMGVRIQNWQVLILELTAGTD*FLWAQN
Trigger: ATTCTGGGCCCACAGAAATCAGTCAGTACCTGCGGT...GAGTTCCAGTATTAACACTTGCCAGTTCTGGATCCTCACACCCATTGGCTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATCGAGGGGGAGATGGGTaGACCAGAAGGTCAACAGTT +
Preference number: 4 (lower is better)
Translates to: QSVPQMSRQLLEVQIPANRGGDG*TRRSTV
Trigger: AACTGTTGACCTTCTGGTTCACCCATCTCCCCCTCG...ATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp TCTGTTAGCAATCAGATAGCCTACAAGGCCGTCTTGATGGGTATGATCACCACCCGAGGGGGAGATGGGTaGACCAGAAGGTCAACAGTT +
Preference number: 4 (lower is better)
Translates to: SVSNQIAYKAVLMGMITTRGGDG*TRRSTV
Trigger: AACTGTTGACCTTCTGGTTCACCCATCTCCCCCTCG...GGTGGTGATCATACCCATCAAGACGGCCTTGTAGGCTATCTGATTGCTAACAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CTCAGAGATGAACCTGGCTTCGATTGGTGCTTGAATGCGCTCAGCCAATGGGTGCAAAGCCTGAGGAAATaGACAGTAGCTGTGGGTCAA +
Preference number: 4 (lower is better)
Translates to: LRDEPGFDWCLNALSQWVQSLRK*TVAVGQ
Trigger: TTGACCCACAGCTACTGTTCATTTCCTCAGGCTTTG...CACCCATTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGGTTCATCTCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GGGCCTAGTGACACTGGCAGGCTTTCTGTGTGCCAACTCTGGCTAGCTGACAGTTTACTGTCATATTATTaGGGGAATCAGCGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: GPSDTGRLSVCQLWLADSLLSYY*GNQRKA
Trigger: GGCTTTGCGCTGATTCCCTCAATAATATGACAGTAA...ACTGTCAGCTAGCCAGAGTTGGCACACAGAAAGCCTGCCAGTGTCACTAGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp GGCACAGTGGTGGGCACCTATAGTCCCAGCCTGTGCTCTTGGCTATTCAGGACCTCTCTACAGAATCACTaGCTGTTGGGCAAATTACAA +
Preference number: 4 (lower is better)
Translates to: GTVVGTYSPSLCSWLFRTSLQNH*LLGKLQ
Trigger: TTGTAATTTGCCCAACAGTCAGTGATTCTGTAGAGA...GGTCCTGAATAGCCAAGAGCACAGGCTGGGACTATAGGTGCCCACCACTGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS-3UTR GCA 90 bp AGAAGTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGCCAAACTGCAGCAGTaGGCTCAAAGGTTCTTGACC +
Preference number: 4 (lower is better)
Translates to: RSPQLSQSVPQMSRQLLEAKLQQ*AQRFLT
Trigger: GGTCAAGAACCTTTGAGCGCACTGCTGCAGTTTGGC...CTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGACTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000618481.4
CDS-3UTR GCA 90 bp GCTCAGCCAATGGGTGTGAGGATCCAGAACTGGCAAGTGTTAATACTGGAACTCTCCATTGCAATCTGCTaGCAGGACTCAGGGCCTAGT +
Preference number: 4 (lower is better)
Translates to: AQPMGVRIQNWQVLILELSIAIC*QDSGPS
Trigger: ACTAGGCCCTGAGTCCTGGCAGCAGATTGCAATGGA...GAGTTCCAGTATTAACACTTGCCAGTTCTGGATCCTCACACCCATTGGCTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AGAAGTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGTCCATTGCAATCTGCTaGCAGGACTCAGGGCCTAGT +
Preference number: 4 (lower is better)
Translates to: RSPQLSQSVPQMSRQLLESIAIC*QDSGPS
Trigger: ACTAGGCCCTGAGTCCTGGCAGCAGATTGCAATGGA...CTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGACTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGTCCATTGCAATCTGCTaGCAGGACTCAGGGCCTAGT +
Preference number: 4 (lower is better)
Translates to: CHILLTQELTKSYQRKPMSIAIC*QDSGPS
Trigger: ACTAGGCCCTGAGTCCTGGCAGCAGATTGCAATGGA...CATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CAGAAGTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGATCCATTGCAATCTGCTaGCAGGACTCAGGGCCTAGT +
Preference number: 4 (lower is better)
Translates to: QKSPIIPECSTNVQTAAGSIAIC*QDSGPS
Trigger: ACTAGGCCCTGAGTCCTGGCAGCAGATTGCAATGGA...TCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGACTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GTGTCTGTTAGCAATCAGATAGCCTACAAGGCCGTCTTGATGGGTATGATCACCGGATCCATTGCAATCTaGTGCCAGGACTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: VSVSNQIAYKAVLMGMITGSIAI*CQDSGP
Trigger: AGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCC...GGTGATCATACCCATCAAGACGGCCTTGTAGGCTATCTGATTGCTAACAGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACGGATCCATTGCAATCTaGTGCCAGGACTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: CPDSCWRFKFQPIQLQPYGSIAI*CQDSGP
Trigger: AGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCC...GTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATGTTGAGTTCTTCAGGATCCATTaGAATCTGCTGCCAGGACTC +
Preference number: 4 (lower is better)
Translates to: VNAPPQALTCLTCHCHVEFFRIH*NLLPGL
Trigger: GAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAA...CTCAACATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTTCAGTTGTTTCTCTCCAGCTCCGTTaGTGTCTAAGCTTTTCACTT +
Preference number: 4 (lower is better)
Translates to: SVGSSAGTTSSTSVGSVVSLQLR*CLSFSL
Trigger: AAGTGAAAAGCTTAGACAGCAACGGAGCTGGAGAGA...AACAACTGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp CTCTGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGGGGCTTCAGGAAGTaGCTCTTGCAGCTCCCGCGC +
Preference number: 4 (lower is better)
Translates to: LCVHISKIPKGSIFTRWSWGFRK*LLQLPR
Trigger: GCGCGGGAGCTGCAAGAGGCACTTCCTGAAGCCCCA...GCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CTAACAGGTGGGAAAATAAAGCAGCAAGTAGCCGCTTCCATACCACATTTCTTCTTCTGTGGGTTCCAGTaGGGGGACCACCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: LTGGKIKQQVAASIPHFFFCGFQ*GDHLLH
Trigger: GTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAA...GAAGAAATGTGGTATGGAAGCGGCTACTTGCTGCTTTATTTTCCCACCTGTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CTCTCTAGCCAGAGTTACTTGCAGTTGCACTCACAAGTGGGGACCCCAGGTCTCAAGGCTCTCTTCCCTTaGGTTTATCTCCTTCTCACT +
Preference number: 4 (lower is better)
Translates to: LSSQSYLQLHSQVGTPGLKALFP*VYLLLT
Trigger: AGTGAGAAGGAGATAAACGCAAGGGAAGAGAGCCTT...GAGACCTGGGGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGCAGGTACCCCGATGGCCACTaGCAGGATGGCAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: VHISKIPKGSIFTRWSCRYPDGH*QDGNSS
Trigger: GCTGCTGTTGCCATCCTGGCAGTGGCCATCGGGGTA...CCTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTTCAGTTGTTAAATGTCCAGACAGCTaGTGGAGGTTCAAATTCCAG +
Preference number: 4 (lower is better)
Translates to: SVGSSAGTTSSTSVGSVVKCPDS*WRFKFQ
Trigger: CTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTT...AACAACTGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp TCTCTTCTGAAAAGCCTCCTATTTCTTTCTCAGAGCCAGGGCTACCCCGATGGCTGCCTAACATGCCACTaGCATGTTGAGCAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: SLLKSLLFLSQSQGYPDGCLTCH*HVEQKS
Trigger: GGACTTCTGCTCAACATGGCAGTGGCATGTTAGGCA...GCCATCGGGGTAGCCCTGGCTCTGAGAAAGAAATAGGAGGCTTTTCAGAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp CAGGGATGCTGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGACTAACATGCCTAACATaGCACTGCCATGTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: QGCCHILLTQELTKSYQRLTCLT*HCHVEQ
Trigger: CTGCTCAACATGGCAGTGGCATGTTAGGCATGTTAG...TCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCAGCATCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GAAATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCTAACATGCCTAACATaGCACTGCCATGTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: EMQVRRGIKNASRGRWVNLTCLT*HCHVEQ
Trigger: CTGCTCAACATGGCAGTGGCATGTTAGGCATGTTAG...GTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CTTTCTGTGTGCCAACTCTGGCTAGCTGACAGTGACACAGGTAAGCTCTCAGACCCTCAAGCCCTAACATaGCTAACATGCCACTGCCAT +
Preference number: 4 (lower is better)
Translates to: LSVCQLWLADSDTGKLSDPQALT*LTCHCH
Trigger: ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGG...GTCTGAGAGCTTACCTGTGTCACTGTCAGCTAGCCAGAGTTGGCACACAGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp AATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCATCAGATGAATGTGAATaGCCCACCTCAAGCCCTAAC +
Preference number: 4 (lower is better)
Translates to: NAGEKGYQECLEGEMGEPSDECE*PTSSPN
Trigger: GTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGA...TGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTCAACTCAGATGAATGTGAATaGCCCACCTCAAGCCCTAAC +
Preference number: 4 (lower is better)
Translates to: RRGIKNASRGRWVNQKVNSDECE*PTSSPN
Trigger: GTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGA...GTTGACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp ACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAAGTGGGTGCAGAGCCTaGTCATCGAGAAAGATGAAA +
Preference number: 4 (lower is better)
Translates to: TFSFVISGRGCHWHLVGGSGCRA*SSRKMK
Trigger: TTTCATCTTTCTCGATGAGCAGGCTCTGCACCCACT...TCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GGAGGCCCTTGGGATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTCTAGCCAGAGTTACTTaGAGTTGCACTCACAAGTGG +
Preference number: 4 (lower is better)
Translates to: GGPWDLQSDECECPTSSPLARVT*SCTHKW
Trigger: CCACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAG...AGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATCCCAAGGGCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GGGCCTAGTGACACTGGCAGGCTTTCTGTGTGCCAACTCTGGCTAGCTGACAGTGATAACGCACCAGTTTaGTCTTCACCTATGCAAACA +
Preference number: 4 (lower is better)
Translates to: GPSDTGRLSVCQLWLADSDNAPV*SSPMQT
Trigger: TGTTTGCATAGGTGAAGAGCAAACTGGTGCGTTATC...ACTGTCAGCTAGCCAGAGTTGGCACACAGAAAGCCTGCCAGTGTCACTAGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp TCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCACGATTGGTGCTTGAATaGGCTCAGCCAATGGGTGTG +
Preference number: 4 (lower is better)
Translates to: SPIIPECSTNVQTAAGGSRLVLE*AQPMGV
Trigger: CACACCCATTGGCTGAGCGCATTCAAGCACCAATCG...TGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp ATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATAAGGGGTATCAAGAATaGCTCGAGGGGGAGATGGGT +
Preference number: 4 (lower is better)
Translates to: MNVNAPPQALTCLTCHCHKGYQE*LEGEMG
Trigger: ACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTT...ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGGAAAGGGGTATCAAGAATaGCTCGAGGGGGAGATGGGT +
Preference number: 4 (lower is better)
Translates to: PHPVNSGADQELPEKANGKGYQE*LEGEMG
Trigger: ACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTT...TCCATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GGAGCTGCAGTAGGAAGCAGTCCTCATGAGGGCTGTTCCCTTCCACTGCTGGAGAAAAAGGTCTACTTATaGATGTGTAAAACCTGGCCC +
Preference number: 4 (lower is better)
Translates to: GAAVGSSPHEGCSLPLLEKKVYL*MCKTWP
Trigger: GGGCCAGGTTTTACACATCCATAAGTAGACCTTTTT...CTCCAGCAGTGGAAGGGAACAGCCCTCATGAGGACTGCTTCCTACTGCAGCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000616863.4
CDS-3UTR CCA 90 bp ACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAAGGACGCCATTGAATTaGCTGGTGAGGCTCCAAAAA +
Preference number: 4 (lower is better)
Translates to: TFSFVISGRGCHWHLVGGRTPLN*LVRLQK
Trigger: TTTTTGGAGCCTCACCAGCCAATTCAATGGCGTCCT...TCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000616863.4
CDS-3UTR CCA 90 bp CCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGGAGGCAGGGCTGAACACTaGAGAAGTGTGACGGTCAAA +
Preference number: 4 (lower is better)
Translates to: PHPVNSGADQELPEKANGGRAEH*RSVTVK
Trigger: TTTGACCGTCACACTTCTCCAGTGTTCAGCCCTGCC...TCCATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GCTCAGCCAATGGGTGTGAGGATCCAGAACTGGCAAGTGTTAATACTGGAACTCGGCAGGGCTGAACACTaGAGAAGTGTGACGGTCAAA +
Preference number: 4 (lower is better)
Translates to: AQPMGVRIQNWQVLILELGRAEH*RSVTVK
Trigger: TTTGACCGTCACACTTCTCCAGTGTTCAGCCCTGCC...GAGTTCCAGTATTAACACTTGCCAGTTCTGGATCCTCACACCCATTGGCTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CTCTCTAGCCAGAGTTACTTGCAGTTGCACTCACAAGTGGGGACCCCAGGTCTCGGCTCTTTCAGTTCCTaGGACACTTTTTCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: LSSQSYLQLHSQVGTPGLGSFSS*DTFSPR
Trigger: TCTTGGAGAAAAAGTGTCCCAGGAACTGAAAGAGCC...GAGACCTGGGGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GGCACAGTGGTGGGCACCTATAGTCCCAGCCTGTGCTCTTGGCTATTCAGGACCATTTGCAATGCTTTATaGAGAGGCTCTTTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: GTVVGTYSPSLCSWLFRTICNAL*RGSFSS
Trigger: GGAACTGAAAGAGCCTCTCCATAAAGCATTGCAAAT...GGTCCTGAATAGCCAAGAGCACAGGCTGGGACTATAGGTGCCCACCACTGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS-3UTR CCA 90 bp CTCAGAGATGAACCTGGCTTCGATTGGTGCTTGAATGCGCTCAGCCAATGGGTGGTCCAGAGTTGTCGCTaGGCAGGATGTAAATGTCAT +
Preference number: 4 (lower is better)
Translates to: LRDEPGFDWCLNALSQWVVQSCR*AGCKCH
Trigger: ATGACATTTACATCCTGCCCAGCGACAACTCTGGAC...CACCCATTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGGTTCATCTCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTCAACGTCCAGAGTTGTCGCTaGGCAGGATGTAAATGTCAT +
Preference number: 4 (lower is better)
Translates to: RRGIKNASRGRWVNQKVNVQSCR*AGCKCH
Trigger: ATGACATTTACATCCTGCCCAGCGACAACTCTGGAC...GTTGACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CAATGTCTAGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCACAGTTGGAGACTCTaGGGGACTGACTTGTCCAGA +
Preference number: 4 (lower is better)
Translates to: QCLETFSFVISGRGCHWHHSWRL*GTDLSR
Trigger: TCTGGACAAGTCAGTCCCCCAGAGTCTCCAACTGTG...ATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCTAGACATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp TCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCACAGTTGGAGACTCTaGGGGACTGACTTGTCCAGA +
Preference number: 4 (lower is better)
Translates to: SDECECPTSSPNMPNMPLHSWRL*GTDLSR
Trigger: TCTGGACAAGTCAGTCCCCCAGAGTCTCCAACTGTG...CAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CAGAAGTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGACACAGTTGGAGACTCTaGGGGACTGACTTGTCCAGA +
Preference number: 4 (lower is better)
Translates to: QKSPIIPECSTNVQTAAGHSWRL*GTDLSR
Trigger: TCTGGACAAGTCAGTCCCCCAGAGTCTCCAACTGTG...TCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGACTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp TGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGCAGACTGCCAGGAAGTaGTCACAGTTGGAGACTCTG +
Preference number: 4 (lower is better)
Translates to: CHILLTQELTKSYQRKPMQTARK*SQLETL
Trigger: CAGAGTCTCCAACTGTGACCACTTCCTGGCAGTCTG...CATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp TCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCACAGACTGCCAGGAAGTaGTCACAGTTGGAGACTCTG +
Preference number: 4 (lower is better)
Translates to: SPIIPECSTNVQTAAGGSQTARK*SQLETL
Trigger: CAGAGTCTCCAACTGTGACCACTTCCTGGCAGTCTG...TGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GAATTAGAGGAGTTGTTCTCACTCTTCTCTCCAGCTCCGTTGCTGTCTAAGCTTGGTGGCAGTGATATGTaGAAGCAAGGGAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: ELEELFSLFSPAPLLSKLGGSDM*KQGSWG
Trigger: GCCCCAGCTCCCTTGCTTCCACATATCACTGCCACC...AAGCTTAGACAGCAACGGAGCTGGAGAGAAGAGTGAGAACAACTCCTCTAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp CTCTTCTCTCCAGCTCCGTTGCTGTCTAAGCTTTTCACTTCTTCAGGATCCATTTCAGCAGCGTTTCTGTaGGTTCCAGTGCGGGGACCA +
Preference number: 4 (lower is better)
Translates to: LFSPAPLLSKLFTSSGSISAAFL*VPVRGP
Trigger: TGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGA...AATGGATCCTGAAGAAGTGAAAAGCTTAGACAGCAACGGAGCTGGAGAGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp GCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTCGGGCTTCTTCTCGCTaGCAGGGGACAGCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: AGGSNSSQYNSNLTSFCLRASSR*QGTALP
Trigger: TGGAAGAGCTGTCCCCTGCCAGCGAGAAGAAGCCCG...AAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GTGCAGAGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGCGGGCTTCTTCTCGCTaGCAGGGGACAGCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: VQSLLIEKDEILRGLRAKRASSR*QGTALP
Trigger: TGGAAGAGCTGTCCCCTGCCAGCGAGAAGAAGCCCG...CTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCTCTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CTCTGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCCCTCAGACAGCGGCATaGGCTTCATCTCACCGGCGG +
Preference number: 4 (lower is better)
Translates to: LCVHISKIPKGSIFTRWSPQTAA*ASSHRR
Trigger: CCGCCGGTGAGATGAAGCCCATGCCGCTGTCTGAGG...GCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CTTTCTGTGTGCCAACTCTGGCTAGCTGACAGTGACACAGGTAAGCTCTCAGACTGTCCAGACAGCTGCTaGAGGTTCAAATTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: LSVCQLWLADSDTGKLSDCPDSC*RFKFQP
Trigger: TGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACA...GTCTGAGAGCTTACCTGTGTCACTGTCAGCTAGCCAGAGTTGGCACACAGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp TGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACAGTTGCACTCACAAGTaGGGACCCCAGGTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: CPDSCWRFKFQPIQLQPYSCTHK*GPQVSF
Trigger: GAAGGAGACCTGGGGTCCCCACTTGTGAGTGCAACT...GTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATAGTTGCACTCACAAGTaGGGACCCCAGGTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: QSVPQMSRQLLEVQIPANSCTHK*GPQVSF
Trigger: GAAGGAGACCTGGGGTCCCCACTTGTGAGTGCAACT...ATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp ATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATGAACCTGGCTTCGATTaGTGCTTGAATGCGCTCAGC +
Preference number: 4 (lower is better)
Translates to: MNVNAPPQALTCLTCHCHEPGFD*CLNALS
Trigger: GCTGAGCGCATTCAAGCACCAATCGAAGCCAGGTTC...ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AACAGCACTAGTGCCAAGGCTGAGAAACCCGGTCCTGGAGGGGGTGCTTTACCCACCAGAGAAAGCCAATaGAAAACACTATCTAGTTCC +
Preference number: 4 (lower is better)
Translates to: NSTSAKAEKPGPGGGALPTRESQ*KTLSSS
Trigger: GGAACTAGATAGTGTTTTCCATTGGCTTTCTCTGGT...GGGTAAAGCACCCCCTCCAGGACCGGGTTTCTCAGCCTTGGCACTAGTGCTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CAGAAGTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGATGGAGGTGGAAGGAATaGCCTCCTACTATCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QKSPIIPECSTNVQTAAGWRWKE*PPTISS
Trigger: GGAGCTGATAGTAGGAGGCCATTCCTTCCACCTCCA...TCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGACTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp ACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGGTATAAGTTGGAGGTaGAAGGAATGGCCTCCTACT +
Preference number: 4 (lower is better)
Translates to: TFSFVISGRGCHWHLVGGGISWR*KEWPPT
Trigger: AGTAGGAGGCCATTCCTTCCACCTCCAACTTATACC...TCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp TCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTTCAGTTGTTTTAGAGGGTATAAGTTaGAGGTGGAAGGAATGGCCT +
Preference number: 4 (lower is better)
Translates to: SVGSSAGTTSSTSVGSVVLEGIS*RWKEWP
Trigger: AGGCCATTCCTTCCACCTCCAACTTATACCCTCTAA...AACAACTGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp AGGAGTTGTTCTCACTCTTCTCTCCAGCTCCGTTGCTGTCTAAGCTTTTCACTTGCCTCGAGGGGGAGATaGGTGAACCAGAAGGTCAAC +
Preference number: 4 (lower is better)
Translates to: RSCSHSSLQLRCCLSFSLASRGR*VNQKVN
Trigger: GTTGACCTTCTGGTTCACCCATCTCCCCCTCGAGGC...AAGTGAAAAGCTTAGACAGCAACGGAGCTGGAGAGAAGAGTGAGAACAACTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp GTGGAGGAATGTCTAACAGGTGGGAAAATAAAGCAGCAAGTAGCCGCTTCCATAGCCTCGAGGGGGAGATaGGTGAACCAGAAGGTCAAC +
Preference number: 4 (lower is better)
Translates to: VEECLTGGKIKQQVAASIASRGR*VNQKVN
Trigger: GTTGACCTTCTGGTTCACCCATCTCCCCCTCGAGGC...TATGGAAGCGGCTACTTGCTGCTTTATTTTCCCACCTGTTAGACATTCCTCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTGCCTCGAGGGGGAGATaGGTGAACCAGAAGGTCAAC +
Preference number: 4 (lower is better)
Translates to: AAGGSNSSQYNSNLTSFCASRGR*VNQKVN
Trigger: GTTGACCTTCTGGTTCACCCATCTCCCCCTCGAGGC...ACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GGAGCTGCAGTAGGAAGCAGTCCTCATGAGGGCTGTTCCCTTCCACTGCTGGAGTGCCTGATATGTCACTaGCCTTCAGAAATTTCTTTG +
Preference number: 4 (lower is better)
Translates to: GAAVGSSPHEGCSLPLLECLICH*PSEISL
Trigger: CAAAGAAATTTCTGAAGGCCAGTGACATATCAGGCA...CTCCAGCAGTGGAAGGGAACAGCCCTCATGAGGACTGCTTCCTACTGCAGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543133.5
CDS-3UTR CCA 90 bp CAGGATGGCAACAGCAGCAGCCCCTCCAAACAGCAGTATAGACTTGCCCTCAGACAGAGGCACCAAAATTaGCTCAGGAGCATTTGCAAT +
Preference number: 4 (lower is better)
Translates to: QDGNSSSPSKQQYRLALRQRHQN*LRSICN
Trigger: ATTGCAAATGCTCCTGAGCCAATTTTGGTGCCTCTG...TCTGAGGGCAAGTCTATACTGCTGTTTGGAGGGGCTGCTGCTGTTGCCATCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399777.1
CDS-3UTR CCA 90 bp ACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGAGGCACCAAAATCTTaGGGTGAGGAAAGATGTTGC +
Preference number: 4 (lower is better)
Translates to: TFSFVISGRGCHWHLVGGEAPKS*GEERCC
Trigger: GCAACATCTTTCCTCACCCCAAGATTTTGGTGCCTC...TCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000538149.5
3UTR CAA 72 bp AGACACATGTGTCTCTCTAGCCAGAGTTACTTGCAGTaGCACTCACAAGTGGGGACCCCAGGTCTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: RHMCLSSQSYLQ*HSQVGTPGLLH
Trigger: ATGAAGGAGACCTGGGGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAGAGAGACACATGTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GCTCAGCCAATGGGTGTGAGGATCCAGAACTGGCAAGTGTTAATACTGGAACTCTTGAACCCCTTGGGGTaGGGAAAGATGTTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: AQPMGVRIQNWQVLILELLNPLG*GKMLLL
Trigger: CAAGAGCAACATCTTTCCTCACCCCAAGGGGTTCAA...GAGTTCCAGTATTAACACTTGCCAGTTCTGGATCCTCACACCCATTGGCTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000543133.5
ENST00000616863.4
CDS-3UTR TCA 90 bp CAGGGATGCTGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGACAAAGCCTGTGCTGGTaGAGGCTTCAGAAATTTCTT +
Preference number: 4 (lower is better)
Translates to: QGCCHILLTQELTKSYQRQSLCW*RLQKFL
Trigger: AAGAAATTTCTGAAGCCTTCACCAGCACAGGCTTTG...TCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCAGCATCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GTGGAGGAATGTCTAACAGGTGGGAAAATAAAGCAGCAAGTAGCCGCTTCCATACTGGATTGGCAGGGCTaGACACTGGAGAAGTGTGAC +
Preference number: 4 (lower is better)
Translates to: VEECLTGGKIKQQVAASILDWQG*TLEKCD
Trigger: GTCACACTTCTCCAGTGTTCAGCCCTGCCAATCCAG...TATGGAAGCGGCTACTTGCTGCTTTATTTTCCCACCTGTTAGACATTCCTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CTTTCTGTGTGCCAACTCTGGCTAGCTGACAGTGACACAGGTAAGCTCTCAGACAGCCACCTTGCTGAATaGTGTACTCTGCCGAATAGT +
Preference number: 4 (lower is better)
Translates to: LSVCQLWLADSDTGKLSDSHLAE*CTLPNS
Trigger: ACTATTCGGCAGAGTACATCATTCAGCAAGGTGGCT...GTCTGAGAGCTTACCTGTGTCACTGTCAGCTAGCCAGAGTTGGCACACAGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
CDS-3UTR TCA 90 bp AGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTCCCCAGCCACCTTGCTaGATGATGTACTCTGCCGAA +
Preference number: 4 (lower is better)
Translates to: RQLLEVQIPANTTPTLHPPQPPC*MMYSAE
Trigger: TTCGGCAGAGTACATCATTCAGCAAGGTGGCTGGGG...AGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000618481.4
CDS-3UTR TCA 90 bp AGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGGTATTCCTCCTCCTCTaGCTCAAGACTAAACACAGT +
Preference number: 4 (lower is better)
Translates to: RDIFVCHLWEGVPLASSGVFLLL*LKTKHS
Trigger: ACTGTGTTTAGTCTTGAGTCAGAGGAGGAGGAATAC...CCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CTATCCCAATTCTTCCTAAGTAAACCCTCTCTCGCTAAAGCAGTGGGTCTCAATGAGACTCTGGGGGACTaGCTTGTCCAGAGTTGTCGC +
Preference number: 4 (lower is better)
Translates to: LSQFFLSKPSLAKAVGLNETLGD*LVQSCR
Trigger: GCGACAACTCTGGACAAGTCAGTCCCCCAGAGTCTC...ATTGAGACCCACTGCTTTAGCGAGAGAGGGTTTACTTAGGAAGAATTGGGATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTGAACAGTGCAGTCCCTaGGAGGCAGCTGAGAGTACG +
Preference number: 4 (lower is better)
Translates to: AGGSNSSQYNSNLTSFCLEQCSP*EAAEST
Trigger: CGTACTCTCAGCTGCCTCTCAGGGACTGCACTGTTC...AAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTGAAGCTTCGGGGACTTaGCAGACTGAGTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: RQLLEVQIPANTTPTLHPEASGT*QTESRA
Trigger: TGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTC...AGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GAATTAGAGGAGTTGTTCTCACTCTTCTCTCCAGCTCCGTTGCTGTCTAAGCTTCTCAGCCAATGGGTGTaGGGATCCAGAACTGGCAAG +
Preference number: 4 (lower is better)
Translates to: ELEELFSLFSPAPLLSKLLSQWV*GSRTGK
Trigger: CTTGCCAGTTCTGGATCCTCACACCCATTGGCTGAG...AAGCTTAGACAGCAACGGAGCTGGAGAGAAGAGTGAGAACAACTCCTCTAATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp GTGGAGGAATGTCTAACAGGTGGGAAAATAAAGCAGCAAGTAGCCGCTTCCATACTCAGCCAATGGGTGTaGGGATCCAGAACTGGCAAG +
Preference number: 4 (lower is better)
Translates to: VEECLTGGKIKQQVAASILSQWV*GSRTGK
Trigger: CTTGCCAGTTCTGGATCCTCACACCCATTGGCTGAG...TATGGAAGCGGCTACTTGCTGCTTTATTTTCCCACCTGTTAGACATTCCTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACGCTTCGATTGGTGCTTaGATGCGCTCAGCCAATGGG +
Preference number: 4 (lower is better)
Translates to: DLQSDECECPTSSPNMPNASIGA*MRSANG
Trigger: CCCATTGGCTGAGCGCATTCAAGCACCAATCGAAGC...GTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CAGGATGGCAACAGCAGCAGCCCCTCCAAACAGCAGTATAGACTTGCCCTCAGACTAGTTCCATTACCGTaGAATACAACTGGCCAAATC +
Preference number: 4 (lower is better)
Translates to: QDGNSSSPSKQQYRLALRLVPLP*NTTGQI
Trigger: GATTTGGCCAGTTGTATTTCACGGTAATGGAACTAG...TCTGAGGGCAAGTCTATACTGCTGTTTGGAGGGGCTGCTGCTGTTGCCATCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp TCTGTTAGCAATCAGATAGCCTACAAGGCCGTCTTGATGGGTATGATCACCACCACCGCAGGTACTGACTaGTTTCTGTGGGCCCAGAAT +
Preference number: 4 (lower is better)
Translates to: SVSNQIAYKAVLMGMITTTAGTD*FLWAQN
Trigger: ATTCTGGGCCCACAGAAATCAGTCAGTACCTGCGGT...GGTGGTGATCATACCCATCAAGACGGCCTTGTAGGCTATCTGATTGCTAACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp TCTCTTCTGAAAAGCCTCCTATTTCTTTCTCAGAGCCAGGGCTACCCCGATGGCCAAAGCCTGAGGAAATaGACAGTAGCTGTGGGTCAA +
Preference number: 4 (lower is better)
Translates to: SLLKSLLFLSQSQGYPDGQSLRK*TVAVGQ
Trigger: TTGACCCACAGCTACTGTTCATTTCCTCAGGCTTTG...GCCATCGGGGTAGCCCTGGCTCTGAGAAAGAAATAGGAGGCTTTTCAGAAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp AACAGCACTAGTGCCAAGGCTGAGAAACCCGGTCCTGGAGGGGGTGCTTTACCCTATCCAGTATGTCGCTaGGATGTTAAACGAGATAAT +
Preference number: 4 (lower is better)
Translates to: NSTSAKAEKPGPGGGALPYPVCR*DVKRDN
Trigger: ATTATCTCGTTTAACATCTCAGCGACATACTGGATA...GGGTAAAGCACCCCCTCCAGGACCGGGTTTCTCAGCCTTGGCACTAGTGCTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCTTATATCCAGTATGTCGCTaGGATGTTAAACGAGATAAT +
Preference number: 4 (lower is better)
Translates to: LRGLDRLSPEQALARGILYPVCR*DVKRDN
Trigger: ATTATCTCGTTTAACATCTCAGCGACATACTGGATA...TAAGATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CTAACAGGTGGGAAAATAAAGCAGCAAGTAGCCGCTTCCATACCACATTTCTTCGAAGCTATATCTAGTTaGACCCCTGGCCCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: LTGGKIKQQVAASIPHFFEAISS*TPGPGP
Trigger: GGGGCCAGGGCCAGGGGTTCAACTAGATATAGCTTC...GAAGAAATGTGGTATGGAAGCGGCTACTTGCTGCTTTATTTTCCCACCTGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611738.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GGAGGCCCTTGGGATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTACCAAAATCTTGGGGTaGGGAAAGATGTTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: GGPWDLQSDECECPTSSPTKILG*GKMLLL
Trigger: CAAGAGCAACATCTTTCCTCACCCCAAGATTTTGGT...AGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATCCCAAGGGCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000538149.5
CDS-3UTR GCA 90 bp TGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGCAGCCTGGCCCTGGCCCCTaGCCCAGAAGAGATGAAAGA +
Preference number: 4 (lower is better)
Translates to: CTYFEDSQRQHFYKVELQPGPGP*PRRDER
Trigger: TCTTTCATCTCTTCTGGGGCAGGGGCCAGGGCCAGG...CTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TGGGACACTAAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACACCTGGCCCTGGCCCCTaGCCCAGAAGAGATGAAAGA +
Preference number: 4 (lower is better)
Translates to: WDTKTQNKDTLQDKAGKTPGPGP*PRRDER
Trigger: TCTTTCATCTCTTCTGGGGCAGGGGCCAGGGCCAGG...TGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTTAGTGTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTTCAGTTGTTCAGGAGCATTTGCAATaGTTTATGGAGAGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: SVGSSAGTTSSTSVGSVVQEHLQ*FMERLF
Trigger: AAAGAGCCTCTCCATAAAGCATTGCAAATGCTCCTG...AACAACTGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355028.4
ENST00000399777.1
CDS-3UTR GCA 90 bp TCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCATATGTCACGCCAAACTaGAGCAGTGCGCTCAAAGGT +
Preference number: 4 (lower is better)
Translates to: SPIIPECSTNVQTAAGGSYVTPN*SSALKG
Trigger: ACCTTTGAGCGCACTGCTGCAGTTTGGCGTGACATA...TGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000618481.4
CDS-3UTR GCA 90 bp ATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATGGTAAGCTCTCAGACTaGCAGGAAGTGGTCACAGTT +
Preference number: 4 (lower is better)
Translates to: MNVNAPPQALTCLTCHCHGKLSD*QEVVTV
Trigger: AACTGTGACCACTTCCTGGCAGTCTGAGAGCTTACC...ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCTCCATTGCAATCTGCTaGCAGGACTCAGGGCCTAGT +
Preference number: 4 (lower is better)
Translates to: STNVQTAAGGSNSSQYNSSIAIC*QDSGPS
Trigger: ACTAGGCCCTGAGTCCTGGCAGCAGATTGCAATGGA...GGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACGGATCCATTGCAATCTaGTGCCAGGACTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: DLQSDECECPTSSPNMPNGSIAI*CQDSGP
Trigger: AGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCC...GTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GAAATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACTCTCTCCAGCTCCGTTaGTGTCTAAGCTTTTCACTT +
Preference number: 4 (lower is better)
Translates to: EMQVRRGIKNASRGRWVNSLQLR*CLSFSL
Trigger: AAGTGAAAAGCTTAGACAGCAACGGAGCTGGAGAGA...GTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTTCAGTTGTTGCTGCTTCTTCTTTCTCCACGTaGACAATGTCAGAATTAGAG +
Preference number: 4 (lower is better)
Translates to: GSSAGTTSSTSVGSVVAASSFST*TMSELE
Trigger: CTCTAATTCTGACATTGTGCACGTGGAGAAAGAAGA...AGCAGCAACAACTGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp GTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGCAGGCAGCAGCCTCTTCCATaGCCTCGGGCACCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: VHISKIPKGSIFTRWSCRQQPLP*PRAPLL
Trigger: AAGAAGAGGTGCCCGAGGGCATGGAAGAGGCTGCTG...CCTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GTGCAGAGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGCAGCAGCCTCTTCCATaGCCTCGGGCACCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: VQSLLIEKDEILRGLRAKQQPLP*PRAPLL
Trigger: AAGAAGAGGTGCCCGAGGGCATGGAAGAGGCTGCTG...CTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCTCTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GTGAACCAGAAGGTCAACAGTTGCATTTCTTCATCTAGAATGTTCTCTAGAAGGTGGGGCTTCAGGAAGTaGCTCTTGCAGCTCCCGCGC +
Preference number: 4 (lower is better)
Translates to: VNQKVNSCISSSRMFSRRWGFRK*LLQLPR
Trigger: GCGCGGGAGCTGCAAGAGGCACTTCCTGAAGCCCCA...CCTTCTAGAGAACATTCTAGATGAAGAAATGCAACTGTTGACCTTCTGGTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AGTTGTTGCTGCTTTCACCTCTTCTTCATCAAGTTCTACAAACAGAGATGTAGCTGGGGCTTCAGGAAGTaGCTCTTGCAGCTCCCGCGC +
Preference number: 4 (lower is better)
Translates to: SCCCFHLFFIKFYKQRCSWGFRK*LLQLPR
Trigger: GCGCGGGAGCTGCAAGAGGCACTTCCTGAAGCCCCA...GCTACATCTCTGTTTGTAGAACTTGATGAAGAAGAGGTGAAAGCAGCAACAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp TGGGACACTAAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACATTCTGTGGGTTCCAGTaGGGGGACCACCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: WDTKTQNKDTLQDKAGKTFCGFQ*GDHLLH
Trigger: GTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAA...TGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTTAGTGTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GGAGGCCCTTGGGATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAAGGCTCTCTTCCCTTaGGTTTATCTCCTTCTCACT +
Preference number: 4 (lower is better)
Translates to: GGPWDLQSDECECPTSSPKALFP*VYLLLT
Trigger: AGTGAGAAGGAGATAAACGCAAGGGAAGAGAGCCTT...AGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATCCCAAGGGCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GAAATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACAAGGCTCTCTTCCCTTaGGTTTATCTCCTTCTCACT +
Preference number: 4 (lower is better)
Translates to: EMQVRRGIKNASRGRWVNKALFP*VYLLLT
Trigger: AGTGAGAAGGAGATAAACGCAAGGGAAGAGAGCCTT...GTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CAGGGATGCTGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGGCTCTCTTCCCTTaGGTTTATCTCCTTCTCACT +
Preference number: 4 (lower is better)
Translates to: QGCCHILLTQELTKSYQRKALFP*VYLLLT
Trigger: AGTGAGAAGGAGATAAACGCAAGGGAAGAGAGCCTT...TCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCAGCATCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TGGGACACTAAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACATACCCCGATGGCCACTaGCAGGATGGCAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: WDTKTQNKDTLQDKAGKTYPDGH*QDGNSS
Trigger: GCTGCTGTTGCCATCCTGGCAGTGGCCATCGGGGTA...TGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTTAGTGTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATGTTGAGAAATGTCCAGACAGCTaGTGGAGGTTCAAATTCCAG +
Preference number: 4 (lower is better)
Translates to: VNAPPQALTCLTCHCHVEKCPDS*WRFKFQ
Trigger: CTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTT...CTCAACATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAAAATGTCCAGACAGCTaGTGGAGGTTCAAATTCCAG +
Preference number: 4 (lower is better)
Translates to: NAGEKGYQECLEGEMGEPKCPDS*WRFKFQ
Trigger: CTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTT...TGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GGAGGCCCTTGGGATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAAATGTCCAGACAGCTaGTGGAGGTTCAAATTCCAG +
Preference number: 4 (lower is better)
Translates to: GGPWDLQSDECECPTSSPKCPDS*WRFKFQ
Trigger: CTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTT...AGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATCCCAAGGGCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CAGAAGTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGATGCCTAACATGCCACTaGCATGTTGAGCAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: QKSPIIPECSTNVQTAAGCLTCH*HVEQKS
Trigger: GGACTTCTGCTCAACATGGCAGTGGCATGTTAGGCA...TCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGACTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCATGCCTAACATGCCACTaGCATGTTGAGCAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: SPIIPECSTNVQTAAGGSCLTCH*HVEQKS
Trigger: GGACTTCTGCTCAACATGGCAGTGGCATGTTAGGCA...TGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCTAACATGCCACTaGCATGTTGAGCAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: SQMNVNAPPQALTCLTCHCLTCH*HVEQKS
Trigger: GGACTTCTGCTCAACATGGCAGTGGCATGTTAGGCA...GTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CTAAGCTTTTCACTTCTTCAGGATCCATTGCAATCTGCTGCCAGGACTCAGGGCTGCCTAACATGCCACTaGCATGTTGAGCAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: LSFSLLQDPLQSAARTQGCLTCH*HVEQKS
Trigger: GGACTTCTGCTCAACATGGCAGTGGCATGTTAGGCA...GCCCTGAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGTGAAAAGCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp TCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGTGCCTAACATGCCACTaGCATGTTGAGCAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: SDECECPTSSPNMPNMPLCLTCH*HVEQKS
Trigger: GGACTTCTGCTCAACATGGCAGTGGCATGTTAGGCA...CAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AGAAGTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGCCTCAAGCCCTAACATaGCTAACATGCCACTGCCAT +
Preference number: 4 (lower is better)
Translates to: RSPQLSQSVPQMSRQLLEPQALT*LTCHCH
Trigger: ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGG...CTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGACTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CAGAAGTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGACCTCAAGCCCTAACATaGCTAACATGCCACTGCCAT +
Preference number: 4 (lower is better)
Translates to: QKSPIIPECSTNVQTAAGPQALT*LTCHCH
Trigger: ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGG...TCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGACTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TCCACAAGGCTCTCTTCCCTTGCGTTTATCTCCTTCTCACTCAGCAGCGTTTCTCCTCAAGCCCTAACATaGCTAACATGCCACTGCCAT +
Preference number: 4 (lower is better)
Translates to: STRLSSLAFISFSLSSVSPQALT*LTCHCH
Trigger: ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGG...AGAAACGCTGCTGAGTGAGAAGGAGATAAACGCAAGGGAAGAGAGCCTTGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp TGCTGTCTAAGCTTTTCACTTCTTCAGGATCCATTGCAATCTGCTGCCAGGACTCGGTCCTGGAGGGGGTaGTTTACCCCTAAGATTCTC +
Preference number: 4 (lower is better)
Translates to: CCLSFSLLQDPLQSAARTRSWRG*FTPKIL
Trigger: GAGAATCTTAGGGGTAAAGCACCCCCTCCAGGACCG...AGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGTGAAAAGCTTAGACAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp AGGTGGAGCTGCAGGAAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCGAGGAAAGAAAATTATaGCGATGCTCAACTAGCATA +
Preference number: 4 (lower is better)
Translates to: RWSCRKLRGLDRLSPEQAEERKL*RCSTSI
Trigger: TATGCTAGTTGAGCATCGGCATAATTTTCTTTCCTC...GGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTCCTGCAGCTCCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCCCTGGCTTCGATTGGTaGTTGAATGCGCTCAGCCAA +
Preference number: 4 (lower is better)
Translates to: STNVQTAAGGSNSSQYNSPGFDW*LNALSQ
Trigger: TTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGG...GGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CTTTCTGTGTGCCAACTCTGGCTAGCTGACAGTGACACAGGTAAGCTCTCAGACGAAGAACAGGGATGCTaGCACATCCTGTTAACTCAG +
Preference number: 4 (lower is better)
Translates to: LSVCQLWLADSDTGKLSDEEQGC*HILLTQ
Trigger: CTGAGTTAACAGGATGTGGCAGCATCCCTGTTCTTC...GTCTGAGAGCTTACCTGTGTCACTGTCAGCTAGCCAGAGTTGGCACACAGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp AGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTTCAAAAAAGGTCTACTTATaGATGTGTAAAACCTGGCCC +
Preference number: 4 (lower is better)
Translates to: SVSVGSSAGTTSSTSVGSKKVYL*MCKTWP
Trigger: GGGCCAGGTTTTACACATCCATAAGTAGACCTTTTT...TGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp ACTTCTTCAGGATCCATTGCAATCTGCTGCCAGGACTCAGGGCCTAGTGACACTAGGACGCCATTGAATTaGCTGGTGAGGCTCCAAAAA +
Preference number: 4 (lower is better)
Translates to: TSSGSIAICCQDSGPSDTRTPLN*LVRLQK
Trigger: TTTTTGGAGCCTCACCAGCCAATTCAATGGCGTCCT...AGTGTCACTAGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp TCTGTTAGCAATCAGATAGCCTACAAGGCCGTCTTGATGGGTATGATCACCACCGGCAGGGCTGAACACTaGAGAAGTGTGACGGTCAAA +
Preference number: 4 (lower is better)
Translates to: SVSNQIAYKAVLMGMITTGRAEH*RSVTVK
Trigger: TTTGACCGTCACACTTCTCCAGTGTTCAGCCCTGCC...GGTGGTGATCATACCCATCAAGACGGCCTTGTAGGCTATCTGATTGCTAACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317582.10
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGGATGCCTGATATGTCACTaGCTGGCTCAGGAGCATTTG +
Preference number: 4 (lower is better)
Translates to: PHPVNSGADQELPEKANGCLICH*LAQEHL
Trigger: CAAATGCTCCTGAGCCAGCCAGTGACATATCAGGCA...TCCATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317582.10
ENST00000611738.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GTGTCTGTTAGCAATCAGATAGCCTACAAGGCCGTCTTGATGGGTATGATCACCCACAGTTGGAGACTCTaGGGGACTGACTTGTCCAGA +
Preference number: 4 (lower is better)
Translates to: VSVSNQIAYKAVLMGMITHSWRL*GTDLSR
Trigger: TCTGGACAAGTCAGTCCCCCAGAGTCTCCAACTGTG...GGTGATCATACCCATCAAGACGGCCTTGTAGGCTATCTGATTGCTAACAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTGGAAGTGGTCACAGTTaGAGACTCTGGGGGACTGAC +
Preference number: 4 (lower is better)
Translates to: AAGGSNSSQYNSNLTSFCGSGHS*RLWGTD
Trigger: GTCAGTCCCCCAGAGTCTCCAACTGTGACCACTTCC...ACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp TCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCATCTGTGTGCCAACTCTaGCTAGCTGACAGTGACACA +
Preference number: 4 (lower is better)
Translates to: SPIIPECSTNVQTAAGGSSVCQL*LADSDT
Trigger: TGTGTCACTGTCAGCTAGCCAGAGTTGGCACACAGA...TGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AGAAGTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGTCTGTGTGCCAACTCTaGCTAGCTGACAGTGACACA +
Preference number: 4 (lower is better)
Translates to: RSPQLSQSVPQMSRQLLESVCQL*LADSDT
Trigger: TGTGTCACTGTCAGCTAGCCAGAGTTGGCACACAGA...CTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGACTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CTCTGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTTGCAGCTCCCGCGCTaGCAAGACCACAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: LCVHISKIPKGSIFTRWSLQLPR*QDHRSH
Trigger: GTGGCTTCTGTGGTCTTGCCAGCGCGGGAGCTGCAA...GCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGCAGGGGTGGCAGTGATATGTaGAAGCAAGGGAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: VHISKIPKGSIFTRWSCRGGSDM*KQGSWG
Trigger: GCCCCAGCTCCCTTGCTTCCACATATCACTGCCACC...CCTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CTAACAGGTGGGAAAATAAAGCAGCAAGTAGCCGCTTCCATACCACATTTCTTCTCAGCAGCGTTTCTGTaGGTTCCAGTGCGGGGACCA +
Preference number: 4 (lower is better)
Translates to: LTGGKIKQQVAASIPHFFSAAFL*VPVRGP
Trigger: TGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGA...GAAGAAATGTGGTATGGAAGCGGCTACTTGCTGCTTTATTTTCCCACCTGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GATTCTCAATTTAGCATGAGCGGAGGCCCTTGGGATTTACAGTCAGATGAATGTTCAGCAGCGTTTCTGTaGGTTCCAGTGCGGGGACCA +
Preference number: 4 (lower is better)
Translates to: DSQFSMSGGPWDLQSDECSAAFL*VPVRGP
Trigger: TGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGA...ACATTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp TGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTTCCGGGCTTCTTCTCGCTaGCAGGGGACAGCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: WRFKFQPIQLQPYILLSFRASSR*QGTALP
Trigger: TGGAAGAGCTGTCCCCTGCCAGCGAGAAGAAGCCCG...GAAAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AGTTGTTGCTGCTTTCACCTCTTCTTCATCAAGTTCTACAAACAGAGATGTAGCCCTCAGACAGCGGCATaGGCTTCATCTCACCGGCGG +
Preference number: 4 (lower is better)
Translates to: SCCCFHLFFIKFYKQRCSPQTAA*ASSHRR
Trigger: CCGCCGGTGAGATGAAGCCCATGCCGCTGTCTGAGG...GCTACATCTCTGTTTGTAGAACTTGATGAAGAAGAGGTGAAAGCAGCAACAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp TGGGACACTAAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACAGCAAGCCCTCGCCCGTaGGATCTTAGCAGGAACCTG +
Preference number: 4 (lower is better)
Translates to: WDTKTQNKDTLQDKAGKTASPRP*DLSRNL
Trigger: CAGGTTCCTGCTAAGATCCCACGGGCGAGGGCTTGC...TGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTTAGTGTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTAGTTGCACTCACAAGTaGGGACCCCAGGTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: AAGGSNSSQYNSNLTSFCSCTHK*GPQVSF
Trigger: GAAGGAGACCTGGGGTCCCCACTTGTGAGTGCAACT...ACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CTCAGAGATGAACCTGGCTTCGATTGGTGCTTGAATGCGCTCAGCCAATGGGTGACCGTGAAATACAACTaGCCAAATCACTGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: LRDEPGFDWCLNALSQWVTVKYN*PNHCGG
Trigger: TCCTCCACAGTGATTTGGCCAGTTGTATTTCACGGT...CACCCATTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGGTTCATCTCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp TCTGTTAGCAATCAGATAGCCTACAAGGCCGTCTTGATGGGTATGATCACCACCTGGAGGTGGAAGGAATaGCCTCCTACTATCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SVSNQIAYKAVLMGMITTWRWKE*PPTISS
Trigger: GGAGCTGATAGTAGGAGGCCATTCCTTCCACCTCCA...GGTGGTGATCATACCCATCAAGACGGCCTTGTAGGCTATCTGATTGCTAACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCATTAGAGGGTATAAGTTaGAGGTGGAAGGAATGGCCT +
Preference number: 4 (lower is better)
Translates to: NAGEKGYQECLEGEMGEPLEGIS*RWKEWP
Trigger: AGGCCATTCCTTCCACCTCCAACTTATACCCTCTAA...TGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GATTCTCAATTTAGCATGAGCGGAGGCCCTTGGGATTTACAGTCAGATGAATGTGCCTCGAGGGGGAGATaGGTGAACCAGAAGGTCAAC +
Preference number: 4 (lower is better)
Translates to: DSQFSMSGGPWDLQSDECASRGR*VNQKVN
Trigger: GTTGACCTTCTGGTTCACCCATCTCCCCCTCGAGGC...ACATTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CAGAAGTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGATGCATCTGGTATCCCTaGGACAGAAATGCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: QKSPIIPECSTNVQTAAGCIWYP*DRNAGE
Trigger: CTCACCTGCATTTCTGTCCCAGGGATACCAGATGCA...TCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGACTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp ATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATTGCATCTGGTATCCCTaGGACAGAAATGCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: MNVNAPPQALTCLTCHCHCIWYP*DRNAGE
Trigger: CTCACCTGCATTTCTGTCCCAGGGATACCAGATGCA...ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GCTCAGCCAATGGGTGTGAGGATCCAGAACTGGCAAGTGTTAATACTGGAACTCGGTAGTGGCTGCATCTaGTATCCCTGGGACAGAAAT +
Preference number: 4 (lower is better)
Translates to: AQPMGVRIQNWQVLILELGSGCI*YPWDRN
Trigger: ATTTCTGTCCCAGGGATACCAGATGCAGCCACTACC...GAGTTCCAGTATTAACACTTGCCAGTTCTGGATCCTCACACCCATTGGCTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp ATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATGGTAGTGGCTGCATCTaGTATCCCTGGGACAGAAAT +
Preference number: 4 (lower is better)
Translates to: MNVNAPPQALTCLTCHCHGSGCI*YPWDRN
Trigger: ATTTCTGTCCCAGGGATACCAGATGCAGCCACTACC...ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CTAAGCTTTTCACTTCTTCAGGATCCATTGCAATCTGCTGCCAGGACTCAGGGCGCTTGTGTGGGAATTTaGGCAGAAGCTCTAGGTCGT +
Preference number: 4 (lower is better)
Translates to: LSFSLLQDPLQSAARTQGACVGI*AEALGR
Trigger: ACGACCTAGAGCTTCTGCCCAAATTCCCACACAAGC...GCCCTGAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGTGAAAAGCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337612.9
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp AGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTCAACGGAGTCCCAAGTAGCTaGGAACAACATACTTTGTTT +
Preference number: 4 (lower is better)
Translates to: RRGIKNASRGRWVNQKVNGVPSS*EQHTLF
Trigger: AAACAAAGTATGTTGTTCTCAGCTACTTGGGACTCC...GTTGACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000616863.4
CDS-3UTR TCA 90 bp CCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGGAGAAGCTATATCTAGTTaGACCCCTTGGGGTGAGGAA +
Preference number: 4 (lower is better)
Translates to: PHPVNSGADQELPEKANGEAISS*TPWGEE
Trigger: TTCCTCACCCCAAGGGGTTCAACTAGATATAGCTTC...TCCATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000543133.5
ENST00000616863.4
CDS-3UTR TCA 90 bp AGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACGAAGCTATATCTAGTTaGACCCCTTGGGGTGAGGAA +
Preference number: 4 (lower is better)
Translates to: SQMNVNAPPQALTCLTCHEAISS*TPWGEE
Trigger: TTCCTCACCCCAAGGGGTTCAACTAGATATAGCTTC...GTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000498133.5
ENST00000543133.5
ENST00000616863.4
CDS-3UTR TCA 90 bp CTCTTCTCTCCAGCTCCGTTGCTGTCTAAGCTTTTCACTTCTTCAGGATCCATTAACACTGGAGAAGTGTaGCGGTCAAAGCCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: LFSPAPLLSKLFTSSGSINTGEV*RSKPVL
Trigger: CAGCACAGGCTTTGACCGTCACACTTCTCCAGTGTT...AATGGATCCTGAAGAAGTGAAAAGCTTAGACAGCAACGGAGCTGGAGAGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355028.4
CDS-3UTR TCA 90 bp GCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTCTGGATTGGCAGGGCTaGACACTGGAGAAGTGTGAC +
Preference number: 4 (lower is better)
Translates to: AGGSNSSQYNSNLTSFCLLDWQG*TLEKCD
Trigger: GTCACACTTCTCCAGTGTTCAGCCCTGCCAATCCAG...AAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGCAGGCTGGATTGGCAGGGCTaGACACTGGAGAAGTGTGAC +
Preference number: 4 (lower is better)
Translates to: VHISKIPKGSIFTRWSCRLDWQG*TLEKCD
Trigger: GTCACACTTCTCCAGTGTTCAGCCCTGCCAATCCAG...CCTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR TCA 90 bp TCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCCAAGCAGTCTTCCATTaGGCTTTCTGGATTGGCAGG +
Preference number: 4 (lower is better)
Translates to: STNVQTAAGGSNSSQYNSQAVFH*AFWIGR
Trigger: CCTGCCAATCCAGAAAGCTCAATGGAAGACTGCTTG...GGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GTGTCTGTTAGCAATCAGATAGCCTACAAGGCCGTCTTGATGGGTATGATCACCCAAGCAGTCTTCCATTaGGCTTTCTGGATTGGCAGG +
Preference number: 4 (lower is better)
Translates to: VSVSNQIAYKAVLMGMITQAVFH*AFWIGR
Trigger: CCTGCCAATCCAGAAAGCTCAATGGAAGACTGCTTG...GGTGATCATACCCATCAAGACGGCCTTGTAGGCTATCTGATTGCTAACAGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317582.10
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GCTCAGCCAATGGGTGTGAGGATCCAGAACTGGCAAGTGTTAATACTGGAACTCAGCCACCTTGCTGAATaGTGTACTCTGCCGAATAGT +
Preference number: 4 (lower is better)
Translates to: AQPMGVRIQNWQVLILELSHLAE*CTLPNS
Trigger: ACTATTCGGCAGAGTACATCATTCAGCAAGGTGGCT...GAGTTCCAGTATTAACACTTGCCAGTTCTGGATCCTCACACCCATTGGCTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000618481.4
CDS-3UTR TCA 90 bp ATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATTGCTATCTTCTGCAGTaGTTCCAGGGTATTCCTCCT +
Preference number: 4 (lower is better)
Translates to: MNVNAPPQALTCLTCHCHCYLLQ*FQGIPP
Trigger: AGGAGGAATACCCTGGAATCACTGCAGAAGATAGCA...ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp TCCACAAGGCTCTCTTCCCTTGCGTTTATCTCCTTCTCACTCAGCAGCGTTTCTTGCTATCTTCTGCAGTaGTTCCAGGGTATTCCTCCT +
Preference number: 4 (lower is better)
Translates to: STRLSSLAFISFSLSSVSCYLLQ*FQGIPP
Trigger: AGGAGGAATACCCTGGAATCACTGCAGAAGATAGCA...AGAAACGCTGCTGAGTGAGAAGGAGATAAACGCAAGGGAAGAGAGCCTTGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp CAGAAGTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAATTCTCAATTTAGCATaGGCGGAGGCCCTTGGGATT +
Preference number: 4 (lower is better)
Translates to: QKSPIIPECSTNVQTAAGILNLA*AEALGI
Trigger: AATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAAT...TCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGACTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp TGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTCTCAGCCAATGGGTGTaGGGATCCAGAACTGGCAAG +
Preference number: 4 (lower is better)
Translates to: CWRFKFQPIQLQPYILLSLSQWV*GSRTGK
Trigger: CTTGCCAGTTCTGGATCCTCACACCCATTGGCTGAG...AGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTACCGCAGGTACTGACTaGTTTCTGTGGGCCCAGAAT +
Preference number: 4 (lower is better)
Translates to: AAGGSNSSQYNSNLTSFCTAGTD*FLWAQN
Trigger: ATTCTGGGCCCACAGAAATCAGTCAGTACCTGCGGT...ACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CTCTGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCGCACACCGCAGGTACTaGCTGATTTCTGTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: LCVHISKIPKGSIFTRWSAHRRY*LISVGP
Trigger: TGGGCCCACAGAAATCAGTCAGTACCTGCGGTGTGC...GCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CTAAGCTTTTCACTTCTTCAGGATCCATTGCAATCTGCTGCCAGGACTCAGGGCCAAAGCCTGAGGAAATaGACAGTAGCTGTGGGTCAA +
Preference number: 4 (lower is better)
Translates to: LSFSLLQDPLQSAARTQGQSLRK*TVAVGQ
Trigger: TTGACCCACAGCTACTGTTCATTTCCTCAGGCTTTG...GCCCTGAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGTGAAAAGCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp TCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCACAAAGCCTGAGGAAATaGACAGTAGCTGTGGGTCAA +
Preference number: 4 (lower is better)
Translates to: SPIIPECSTNVQTAAGGSQSLRK*TVAVGQ
Trigger: TTGACCCACAGCTACTGTTCATTTCCTCAGGCTTTG...TGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GCTCAGCCAATGGGTGTGAGGATCCAGAACTGGCAAGTGTTAATACTGGAACTCCAAAGCCTGAGGAAATaGACAGTAGCTGTGGGTCAA +
Preference number: 4 (lower is better)
Translates to: AQPMGVRIQNWQVLILELQSLRK*TVAVGQ
Trigger: TTGACCCACAGCTACTGTTCATTTCCTCAGGCTTTG...GAGTTCCAGTATTAACACTTGCCAGTTCTGGATCCTCACACCCATTGGCTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATGTTGAGTTACTGTCATATTATTaGGGGAATCAGCGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: VNAPPQALTCLTCHCHVELLSYY*GNQRKA
Trigger: GGCTTTGCGCTGATTCCCTCAATAATATGACAGTAA...CTCAACATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGCAGGCTCTCCGTCCAGATGTaGCCTGAAGACCCAAACCCT +
Preference number: 4 (lower is better)
Translates to: VHISKIPKGSIFTRWSCRLSVQM*PEDPNP
Trigger: AGGGTTTGGGTCTTCAGGTCACATCTGGACGGAGAG...CCTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTCTCTCCGTCCAGATGTaGCCTGAAGACCCAAACCCT +
Preference number: 4 (lower is better)
Translates to: AGGSNSSQYNSNLTSFCLLSVQM*PEDPNP
Trigger: AGGGTTTGGGTCTTCAGGTCACATCTGGACGGAGAG...AAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CTAAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACACACAAACCCTGGCCCTGGCCCCTaGCCCAGAAGAGATGAAAGA +
Preference number: 4 (lower is better)
Translates to: LKHRTKTRYRIKLERHTNPGPGP*PRRDER
Trigger: TCTTTCATCTCTTCTGGGGCAGGGGCCAGGGCCAGG...GTTTGTGTGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGCAGGAGCATTTGCAATaGTTTATGGAGAGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: RDIFVCHLWEGVPLASSGQEHLQ*FMERLF
Trigger: AAAGAGCCTCTCCATAAAGCATTGCAAATGCTCCTG...CCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GCTCAGCCAATGGGTGTGAGGATCCAGAACTGGCAAGTGTTAATACTGGAACTCTGGCTCAGGAGCATTTaGAATGCTTTATGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: AQPMGVRIQNWQVLILELWLRSI*NALWRG
Trigger: GCCTCTCCATAAAGCATTGCAAATGCTCCTGAGCCA...GAGTTCCAGTATTAACACTTGCCAGTTCTGGATCCTCACACCCATTGGCTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CAATGTCTAGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATTGGCTCAGGAGCATTTaGAATGCTTTATGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: QCLETFSFVISGRGCHWHWLRSI*NALWRG
Trigger: GCCTCTCCATAAAGCATTGCAAATGCTCCTGAGCCA...ATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCTAGACATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCATGGCTCAGGAGCATTTaGAATGCTTTATGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: SPIIPECSTNVQTAAGGSWLRSI*NALWRG
Trigger: GCCTCTCCATAAAGCATTGCAAATGCTCCTGAGCCA...TGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACGCCAAACTGCAGCAGTaGGCTCAAAGGTTCTTGACC +
Preference number: 4 (lower is better)
Translates to: DLQSDECECPTSSPNMPNAKLQQ*AQRFLT
Trigger: GGTCAAGAACCTTTGAGCGCACTGCTGCAGTTTGGC...GTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000618481.4
CDS-3UTR GCA 90 bp TGCTGTCTAAGCTTTTCACTTCTTCAGGATCCATTGCAATCTGCTGCCAGGACTGCCAAACTGCAGCAGTaGGCTCAAAGGTTCTTGACC +
Preference number: 4 (lower is better)
Translates to: CCLSFSLLQDPLQSAARTAKLQQ*AQRFLT
Trigger: GGTCAAGAACCTTTGAGCGCACTGCTGCAGTTTGGC...AGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGTGAAAAGCTTAGACAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
CDS-3UTR GCA 90 bp CAGGGATGCTGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAGTCATTGCTATCTTCTaGAGTGATTCCAGGGTATTC +
Preference number: 4 (lower is better)
Translates to: QGCCHILLTQELTKSYQRVIAIF*SDSRVF
Trigger: GAATACCCTGGAATCACTGCAGAAGATAGCAATGAC...TCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCAGCATCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GTGCAGAGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGGGCAGGCTTTCTGTGTaGCAACTCTGGCTAGCTGAC +
Preference number: 4 (lower is better)
Translates to: VQSLLIEKDEILRGLRAKGRLSV*QLWLAD
Trigger: GTCAGCTAGCCAGAGTTGGCACACAGAAAGCCTGCC...CTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCTCTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GAATTAGAGGAGTTGTTCTCACTCTTCTCTCCAGCTCCGTTGCTGTCTAAGCTTTCCATTGCAATCTGCTaGCAGGACTCAGGGCCTAGT +
Preference number: 4 (lower is better)
Translates to: ELEELFSLFSPAPLLSKLSIAIC*QDSGPS
Trigger: ACTAGGCCCTGAGTCCTGGCAGCAGATTGCAATGGA...AAGCTTAGACAGCAACGGAGCTGGAGAGAAGAGTGAGAACAACTCCTCTAATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp AAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTCCATTGCAATCTGCTaGCAGGACTCAGGGCCTAGT +
Preference number: 4 (lower is better)
Translates to: KCPDSCWRFKFQPIQLQPSIAIC*QDSGPS
Trigger: ACTAGGCCCTGAGTCCTGGCAGCAGATTGCAATGGA...AGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TTCTCCACGTGCACAATGTCAGAATTAGAGGAGTTGTTCTCACTCTTCTCTCCAGGATCCATTGCAATCTaGTGCCAGGACTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: FSTCTMSELEELFSLFSPGSIAI*CQDSGP
Trigger: AGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCC...TGGAGAGAAGAGTGAGAACAACTCCTCTAATTCTGACATTGTGCACGTGGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp ATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATTTCTTCAGGATCCATTaGAATCTGCTGCCAGGACTC +
Preference number: 4 (lower is better)
Translates to: MNVNAPPQALTCLTCHCHFFRIH*NLLPGL
Trigger: GAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAA...ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GTGAACCAGAAGGTCAACAGTTGCATTTCTTCATCTAGAATGTTCTCTAGAAGGTCAGGAAGTGCCTCTTaGAGCTCCCGCGCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: VNQKVNSCISSSRMFSRRSGSAS*SSRAGK
Trigger: CTTGCCAGCGCGGGAGCTGCAAGAGGCACTTCCTGA...CCTTCTAGAGAACATTCTAGATGAAGAAATGCAACTGTTGACCTTCTGGTTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AGGACAGCCCCAACACAGAGAATGGTCAGAACAGCACTAGTGCCAAGGCTGAGAAGGTTCAGTTGTTGCTaGTTTCACCTCTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: RTAPTQRMVRTALVPRLRRFSCC*FHLFFI
Trigger: GATGAAGAAGAGGTGAAAGCAGCAACAACTGAACCT...TCTCAGCCTTGGCACTAGTGCTGTTCTGACCATTCTCTGTGTTGGGGCTGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATGTTGAGAGGTTCAGTTGTTGCTaGTTTCACCTCTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: VNAPPQALTCLTCHCHVERFSCC*FHLFFI
Trigger: GATGAAGAAGAGGTGAAAGCAGCAACAACTGAACCT...CTCAACATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AGTTGTTGCTGCTTTCACCTCTTCTTCATCAAGTTCTACAAACAGAGATGTAGCTTCTGTGGGTTCCAGTaGGGGGACCACCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: SCCCFHLFFIKFYKQRCSFCGFQ*GDHLLH
Trigger: GTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAA...GCTACATCTCTGTTTGTAGAACTTGATGAAGAAGAGGTGAAAGCAGCAACAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp GCTCAGCCAATGGGTGTGAGGATCCAGAACTGGCAAGTGTTAATACTGGAACTCCTAACATGCCTAACATaGCACTGCCATGTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: AQPMGVRIQNWQVLILELLTCLT*HCHVEQ
Trigger: CTGCTCAACATGGCAGTGGCATGTTAGGCATGTTAG...GAGTTCCAGTATTAACACTTGCCAGTTCTGGATCCTCACACCCATTGGCTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATCCTCAAGCCCTAACATaGCTAACATGCCACTGCCAT +
Preference number: 4 (lower is better)
Translates to: QSVPQMSRQLLEVQIPANPQALT*LTCHCH
Trigger: ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGG...ATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GTGCAGAGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGCGGTCCTGGAGGGGGTaGTTTACCCCTAAGATTCTC +
Preference number: 4 (lower is better)
Translates to: VQSLLIEKDEILRGLRAKRSWRG*FTPKIL
Trigger: GAGAATCTTAGGGGTAAAGCACCCCCTCCAGGACCG...CTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCTCTGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CTAACAGGTGGGAAAATAAAGCAGCAAGTAGCCGCTTCCATACCACATTTCTTCCGGTCCTGGAGGGGGTaGTTTACCCCTAAGATTCTC +
Preference number: 4 (lower is better)
Translates to: LTGGKIKQQVAASIPHFFRSWRG*FTPKIL
Trigger: GAGAATCTTAGGGGTAAAGCACCCCCTCCAGGACCG...GAAGAAATGTGGTATGGAAGCGGCTACTTGCTGCTTTATTTTCCCACCTGTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGAGTGGGTGCAGAGCCTaGTCATCGAGAAAGATGAAA +
Preference number: 4 (lower is better)
Translates to: CHILLTQELTKSYQRKPMSGCRA*SSRKMK
Trigger: TTTCATCTTTCTCGATGAGCAGGCTCTGCACCCACT...CATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAGTGGGTGCAGAGCCTaGTCATCGAGAAAGATGAAA +
Preference number: 4 (lower is better)
Translates to: SPIIPECSTNVQTAAGGSSGCRA*SSRKMK
Trigger: TTTCATCTTTCTCGATGAGCAGGCTCTGCACCCACT...TGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp ATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATAGTGGGTGCAGAGCCTaGTCATCGAGAAAGATGAAA +
Preference number: 4 (lower is better)
Translates to: MNVNAPPQALTCLTCHCHSGCRA*SSRKMK
Trigger: TTTCATCTTTCTCGATGAGCAGGCTCTGCACCCACT...ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CAATGTCTAGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATAGTGGGTGCAGAGCCTaGTCATCGAGAAAGATGAAA +
Preference number: 4 (lower is better)
Translates to: QCLETFSFVISGRGCHWHSGCRA*SSRKMK
Trigger: TTTCATCTTTCTCGATGAGCAGGCTCTGCACCCACT...ATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCTAGACATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATAGAGTTACTTGCAGTTaGACTCACAAGTGGGGACCC +
Preference number: 4 (lower is better)
Translates to: QSVPQMSRQLLEVQIPANRVTCS*THKWGP
Trigger: GGGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCT...ATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TCTGTTAGCAATCAGATAGCCTACAAGGCCGTCTTGATGGGTATGATCACCACCAGAGTTACTTGCAGTTaGACTCACAAGTGGGGACCC +
Preference number: 4 (lower is better)
Translates to: SVSNQIAYKAVLMGMITTRVTCS*THKWGP
Trigger: GGGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCT...GGTGGTGATCATACCCATCAAGACGGCCTTGTAGGCTATCTGATTGCTAACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCTAGCCAGAGTTACTTaGAGTTGCACTCACAAGTGG +
Preference number: 4 (lower is better)
Translates to: SDECECPTSSPNMPNMPLLARVT*SCTHKW
Trigger: CCACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAG...CAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CTAAGCTTTTCACTTCTTCAGGATCCATTGCAATCTGCTGCCAGGACTCAGGGCCTAGCCAGAGTTACTTaGAGTTGCACTCACAAGTGG +
Preference number: 4 (lower is better)
Translates to: LSFSLLQDPLQSAARTQGLARVT*SCTHKW
Trigger: CCACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAG...GCCCTGAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGTGAAAAGCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp ACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGATAACGCACCAGTTTaGTCTTCACCTATGCAAACA +
Preference number: 4 (lower is better)
Translates to: TFSFVISGRGCHWHLVGGDNAPV*SSPMQT
Trigger: TGTTTGCATAGGTGAAGAGCAAACTGGTGCGTTATC...TCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GGAGGCCCTTGGGATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTGATAACGCACCAGTTTaGTCTTCACCTATGCAAACA +
Preference number: 4 (lower is better)
Translates to: GGPWDLQSDECECPTSSPDNAPV*SSPMQT
Trigger: TGTTTGCATAGGTGAAGAGCAAACTGGTGCGTTATC...AGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATCCCAAGGGCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACCCTGGCTTCGATTGGTaGTTGAATGCGCTCAGCCAA +
Preference number: 4 (lower is better)
Translates to: DLQSDECECPTSSPNMPNPGFDW*LNALSQ
Trigger: TTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGG...GTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GAATTAGAGGAGTTGTTCTCACTCTTCTCTCCAGCTCCGTTGCTGTCTAAGCTTCCTGGCTTCGATTGGTaGTTGAATGCGCTCAGCCAA +
Preference number: 4 (lower is better)
Translates to: ELEELFSLFSPAPLLSKLPGFDW*LNALSQ
Trigger: TTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGG...AAGCTTAGACAGCAACGGAGCTGGAGAGAAGAGTGAGAACAACTCCTCTAATTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp GCTCAGCCAATGGGTGTGAGGATCCAGAACTGGCAAGTGTTAATACTGGAACTCGAAGAACAGGGATGCTaGCACATCCTGTTAACTCAG +
Preference number: 4 (lower is better)
Translates to: AQPMGVRIQNWQVLILELEEQGC*HILLTQ
Trigger: CTGAGTTAACAGGATGTGGCAGCATCCCTGTTCTTC...GAGTTCCAGTATTAACACTTGCCAGTTCTGGATCCTCACACCCATTGGCTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACGCAAAAAGCAGGAGCTaGAGTAGGAAGCAGTCCTCA +
Preference number: 4 (lower is better)
Translates to: CPDSCWRFKFQPIQLQPYAKSRS*SRKQSS
Trigger: TGAGGACTGCTTCCTACTGCAGCTCCTGCTTTTTGC...GTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTAAGGGGTATCAAGAATaGCTCGAGGGGGAGATGGGT +
Preference number: 4 (lower is better)
Translates to: AAGGSNSSQYNSNLTSFCKGYQE*LEGEMG
Trigger: ACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTT...ACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACAGGACGCCATTGAATTaGCTGGTGAGGCTCCAAAAA +
Preference number: 4 (lower is better)
Translates to: SQMNVNAPPQALTCLTCHRTPLN*LVRLQK
Trigger: TTTTTGGAGCCTCACCAGCCAATTCAATGGCGTCCT...GTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000616863.4
CDS-3UTR CCA 90 bp ACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAACTTTTTCTCCAAGATaGGCCAAGCAGTCTTCCATT +
Preference number: 4 (lower is better)
Translates to: TFSFVISGRGCHWHLVGGTFSPR*AKQSSI
Trigger: AATGGAAGACTGCTTGGCCCATCTTGGAGAAAAAGT...TCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GCGGGGACCACCTCCTCCACTTCAGTAGGTTCAGTTGTTGCTGCTTTCACCTCTATTTGCAATGCTTTATaGAGAGGCTCTTTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: AGTTSSTSVGSVVAAFTSICNAL*RGSFSS
Trigger: GGAACTGAAAGAGCCTCTCCATAAAGCATTGCAAAT...AGAGGTGAAAGCAGCAACAACTGAACCTACTGAAGTGGAGGAGGTGGTCCCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355028.4
ENST00000399777.1
CDS-3UTR CCA 90 bp CCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGGAGTCCAGAGTTGTCGCTaGGCAGGATGTAAATGTCAT +
Preference number: 4 (lower is better)
Translates to: PHPVNSGADQELPEKANGVQSCR*AGCKCH
Trigger: ATGACATTTACATCCTGCCCAGCGACAACTCTGGAC...TCCATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GCTCAGCCAATGGGTGTGAGGATCCAGAACTGGCAAGTGTTAATACTGGAACTCGTCCAGAGTTGTCGCTaGGCAGGATGTAAATGTCAT +
Preference number: 4 (lower is better)
Translates to: AQPMGVRIQNWQVLILELVQSCR*AGCKCH
Trigger: ATGACATTTACATCCTGCCCAGCGACAACTCTGGAC...GAGTTCCAGTATTAACACTTGCCAGTTCTGGATCCTCACACCCATTGGCTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CAATGTCTAGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATGTCCAGAGTTGTCGCTaGGCAGGATGTAAATGTCAT +
Preference number: 4 (lower is better)
Translates to: QCLETFSFVISGRGCHWHVQSCR*AGCKCH
Trigger: ATGACATTTACATCCTGCCCAGCGACAACTCTGGAC...ATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCTAGACATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCACAGTTGGAGACTCTaGGGGACTGACTTGTCCAGA +
Preference number: 4 (lower is better)
Translates to: AAGGSNSSQYNSNLTSFCHSWRL*GTDLSR
Trigger: TCTGGACAAGTCAGTCCCCCAGAGTCTCCAACTGTG...ACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GAATTAGAGGAGTTGTTCTCACTCTTCTCTCCAGCTCCGTTGCTGTCTAAGCTTCACAGTTGGAGACTCTaGGGGACTGACTTGTCCAGA +
Preference number: 4 (lower is better)
Translates to: ELEELFSLFSPAPLLSKLHSWRL*GTDLSR
Trigger: TCTGGACAAGTCAGTCCCCCAGAGTCTCCAACTGTG...AAGCTTAGACAGCAACGGAGCTGGAGAGAAGAGTGAGAACAACTCCTCTAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp GCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCAGACTGCCAGGAAGTaGTCACAGTTGGAGACTCTG +
Preference number: 4 (lower is better)
Translates to: AAGGSNSSQYNSNLTSFCQTARK*SQLETL
Trigger: CAGAGTCTCCAACTGTGACCACTTCCTGGCAGTCTG...ACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GAATTAGAGGAGTTGTTCTCACTCTTCTCTCCAGCTCCGTTGCTGTCTAAGCTTCAGACTGCCAGGAAGTaGTCACAGTTGGAGACTCTG +
Preference number: 4 (lower is better)
Translates to: ELEELFSLFSPAPLLSKLQTARK*SQLETL
Trigger: CAGAGTCTCCAACTGTGACCACTTCCTGGCAGTCTG...AAGCTTAGACAGCAACGGAGCTGGAGAGAAGAGTGAGAACAACTCCTCTAATTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp GTGGAGGAATGTCTAACAGGTGGGAAAATAAAGCAGCAAGTAGCCGCTTCCATACAGACTGCCAGGAAGTaGTCACAGTTGGAGACTCTG +
Preference number: 4 (lower is better)
Translates to: VEECLTGGKIKQQVAASIQTARK*SQLETL
Trigger: CAGAGTCTCCAACTGTGACCACTTCCTGGCAGTCTG...TATGGAAGCGGCTACTTGCTGCTTTATTTTCCCACCTGTTAGACATTCCTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GTGAACCAGAAGGTCAACAGTTGCATTTCTTCATCTAGAATGTTCTCTAGAAGGTTGCAGCTCCCGCGCTaGCAAGACCACAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: VNQKVNSCISSSRMFSRRLQLPR*QDHRSH
Trigger: GTGGCTTCTGTGGTCTTGCCAGCGCGGGAGCTGCAA...CCTTCTAGAGAACATTCTAGATGAAGAAATGCAACTGTTGACCTTCTGGTTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp TGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTTCTCAGCAGCGTTTCTGTaGGTTCCAGTGCGGGGACCA +
Preference number: 4 (lower is better)
Translates to: WRFKFQPIQLQPYILLSFSAAFL*VPVRGP
Trigger: TGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGA...GAAAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCACGGGCTTCTTCTCGCTaGCAGGGGACAGCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: SLLIEKDEILRGLRAKKSRASSR*QGTALP
Trigger: TGGAAGAGCTGTCCCCTGCCAGCGAGAAGAAGCCCG...TGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACACACAAACATCCAGGGCTACCCCGATaGCCACTGCCAGGATGGCAA +
Preference number: 4 (lower is better)
Translates to: KTQNKDTLQDKAGKTHKHPGLPR*PLPGWQ
Trigger: TTGCCATCCTGGCAGTGGCCATCGGGGTAGCCCTGG...ATGTTTGTGTGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GTGTCTGTTAGCAATCAGATAGCCTACAAGGCCGTCTTGATGGGTATGATCACCTGTCCAGACAGCTGCTaGAGGTTCAAATTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: VSVSNQIAYKAVLMGMITCPDSC*RFKFQP
Trigger: TGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACA...GGTGATCATACCCATCAAGACGGCCTTGTAGGCTATCTGATTGCTAACAGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACATGAGCGGAGGCCCTTaGGATTTACAGTCAGATGAA +
Preference number: 4 (lower is better)
Translates to: SQMNVNAPPQALTCLTCHMSGGP*DLQSDE
Trigger: TTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCAT...GTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AAGCTTTTCACTTCTTCAGGATCCATTGCAATCTGCTGCCAGGACTCAGGGCCTATGAGCGGAGGCCCTTaGGATTTACAGTCAGATGAA +
Preference number: 4 (lower is better)
Translates to: KLFTSSGSIAICCQDSGPMSGGP*DLQSDE
Trigger: TTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCAT...AGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGTGAAAAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp CAATGTCTAGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATATGAGCGGAGGCCCTTaGGATTTACAGTCAGATGAA +
Preference number: 4 (lower is better)
Translates to: QCLETFSFVISGRGCHWHMSGGP*DLQSDE
Trigger: TTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCAT...ATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCTAGACATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp TCCATTGCAATCTGCTGCCAGGACTCAGGGCCTAGTGACACTGGCAGGCTTTCTCTAAGTTCTCTCAGCTaGGAATTTCTATCCCAATTC +
Preference number: 4 (lower is better)
Translates to: SIAICCQDSGPSDTGRLSLSSLS*EFLSQF
Trigger: GAATTGGGATAGAAATTCCCAGCTGAGAGAACTTAG...AGAAAGCCTGCCAGTGTCACTAGGCCCTGAGTCCTGGCAGCAGATTGCAATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp GTGAACCAGAAGGTCAACAGTTGCATTTCTTCATCTAGAATGTTCTCTAGAAGGGCAAGCCCTCGCCCGTaGGATCTTAGCAGGAACCTG +
Preference number: 4 (lower is better)
Translates to: VNQKVNSCISSSRMFSRRASPRP*DLSRNL
Trigger: CAGGTTCCTGCTAAGATCCCACGGGCGAGGGCTTGC...CCTTCTAGAGAACATTCTAGATGAAGAAATGCAACTGTTGACCTTCTGGTTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GTGCAGAGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAGTTGCACTCACAAGTaGGGACCCCAGGTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: VQSLLIEKDEILRGLRAKSCTHK*GPQVSF
Trigger: GAAGGAGACCTGGGGTCCCCACTTGTGAGTGCAACT...CTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCTCTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GAAATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACGTGAGGATCCAGAACTaGCAAGTGTTAATACTGGAA +
Preference number: 4 (lower is better)
Translates to: EMQVRRGIKNASRGRWVNVRIQN*QVLILE
Trigger: TTCCAGTATTAACACTTGCCAGTTCTGGATCCTCAC...GTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACGAACCTGGCTTCGATTaGTGCTTGAATGCGCTCAGC +
Preference number: 4 (lower is better)
Translates to: DLQSDECECPTSSPNMPNEPGFD*CLNALS
Trigger: GCTGAGCGCATTCAAGCACCAATCGAAGCCAGGTTC...GTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GGAGGCCCTTGGGATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTTATTCTTTCCTTTCGTaGGCAACACAGGCTCCAATT +
Preference number: 4 (lower is better)
Translates to: GGPWDLQSDECECPTSSPYSFLS*ATQAPI
Trigger: AATTGGAGCCTGTGTTGCCCACGAAAGGAAAGAATA...AGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATCCCAAGGGCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp ACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGATATTCTTTCCTTTCGTaGGCAACACAGGCTCCAATT +
Preference number: 4 (lower is better)
Translates to: TFSFVISGRGCHWHLVGGYSFLS*ATQAPI
Trigger: AATTGGAGCCTGTGTTGCCCACGAAAGGAAAGAATA...TCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CTTTCTGTGTGCCAACTCTGGCTAGCTGACAGTGACACAGGTAAGCTCTCAGACACCGTGAAATACAACTaGCCAAATCACTGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: LSVCQLWLADSDTGKLSDTVKYN*PNHCGG
Trigger: TCCTCCACAGTGATTTGGCCAGTTGTATTTCACGGT...GTCTGAGAGCTTACCTGTGTCACTGTCAGCTAGCCAGAGTTGGCACACAGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp GATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACTGGAGGTGGAAGGAATaGCCTCCTACTATCAGCTCC +
Preference number: 4 (lower is better)
Translates to: DLQSDECECPTSSPNMPNWRWKE*PPTISS
Trigger: GGAGCTGATAGTAGGAGGCCATTCCTTCCACCTCCA...GTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AGAAGTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGGTATAAGTTGGAGGTaGAAGGAATGGCCTCCTACT +
Preference number: 4 (lower is better)
Translates to: RSPQLSQSVPQMSRQLLEGISWR*KEWPPT
Trigger: AGTAGGAGGCCATTCCTTCCACCTCCAACTTATACC...CTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGACTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CTAAGCTTTTCACTTCTTCAGGATCCATTGCAATCTGCTGCCAGGACTCAGGGCGGTATAAGTTGGAGGTaGAAGGAATGGCCTCCTACT +
Preference number: 4 (lower is better)
Translates to: LSFSLLQDPLQSAARTQGGISWR*KEWPPT
Trigger: AGTAGGAGGCCATTCCTTCCACCTCCAACTTATACC...GCCCTGAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGTGAAAAGCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp CTCTGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCGCCTCGAGGGGGAGATaGGTGAACCAGAAGGTCAAC +
Preference number: 4 (lower is better)
Translates to: LCVHISKIPKGSIFTRWSASRGR*VNQKVN
Trigger: GTTGACCTTCTGGTTCACCCATCTCCCCCTCGAGGC...GCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GCTCAGCCAATGGGTGTGAGGATCCAGAACTGGCAAGTGTTAATACTGGAACTCCAAAGCCTGTGCTGGTaGAGGCTTCAGAAATTTCTT +
Preference number: 4 (lower is better)
Translates to: AQPMGVRIQNWQVLILELQSLCW*RLQKFL
Trigger: AAGAAATTTCTGAAGCCTTCACCAGCACAGGCTTTG...GAGTTCCAGTATTAACACTTGCCAGTTCTGGATCCTCACACCCATTGGCTGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GATTCTCAATTTAGCATGAGCGGAGGCCCTTGGGATTTACAGTCAGATGAATGTAACACTGGAGAAGTGTaGCGGTCAAAGCCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: DSQFSMSGGPWDLQSDECNTGEV*RSKPVL
Trigger: CAGCACAGGCTTTGACCGTCACACTTCTCCAGTGTT...ACATTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GTGGAGGAATGTCTAACAGGTGGGAAAATAAAGCAGCAAGTAGCCGCTTCCATACAAGCAGTCTTCCATTaGGCTTTCTGGATTGGCAGG +
Preference number: 4 (lower is better)
Translates to: VEECLTGGKIKQQVAASIQAVFH*AFWIGR
Trigger: CCTGCCAATCCAGAAAGCTCAATGGAAGACTGCTTG...TATGGAAGCGGCTACTTGCTGCTTTATTTTCCCACCTGTTAGACATTCCTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR TCA 90 bp TGGGACACTAAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACATTCCAGCCGCTGGCATaGACTGTGGTCTCCAGTGTA +
Preference number: 4 (lower is better)
Translates to: WDTKTQNKDTLQDKAGKTFQPLA*TVVSSV
Trigger: TACACTGGAGACCACAGTTCATGCCAGCGGCTGGAA...TGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTTAGTGTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317582.10
ENST00000543133.5
ENST00000611738.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTGCGCTCAAAGGTTCTTaGCCACGTCTTGTCAATTCC +
Preference number: 4 (lower is better)
Translates to: RQLLEVQIPANTTPTLHPALKGS*PRLVNS
Trigger: GGAATTGACAAGACGTGGTCAAGAACCTTTGAGCGC...AGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000618481.4
CDS-3UTR TCA 90 bp TGCTGTCTAAGCTTTTCACTTCTTCAGGATCCATTGCAATCTGCTGCCAGGACTGCGCTCAAAGGTTCTTaGCCACGTCTTGTCAATTCC +
Preference number: 4 (lower is better)
Translates to: CCLSFSLLQDPLQSAARTALKGS*PRLVNS
Trigger: GGAATTGACAAGACGTGGTCAAGAACCTTTGAGCGC...AGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGTGAAAAGCTTAGACAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
CDS-3UTR TCA 90 bp GATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACGCGCTCAAAGGTTCTTaGCCACGTCTTGTCAATTCC +
Preference number: 4 (lower is better)
Translates to: DLQSDECECPTSSPNMPNALKGS*PRLVNS
Trigger: GGAATTGACAAGACGTGGTCAAGAACCTTTGAGCGC...GTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000618481.4
CDS-3UTR TCA 90 bp AGTTGTTGCTGCTTTCACCTCTTCTTCATCAAGTTCTACAAACAGAGATGTAGCGCAGGGAGGTGGCAGTaGTATGTGGAAGCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: SCCCFHLFFIKFYKQRCSAGRWQ*YVEARE
Trigger: CTCCCTTGCTTCCACATATCACTGCCACCTCCCTGC...GCTACATCTCTGTTTGTAGAACTTGATGAAGAAGAGGTGAAAGCAGCAACAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp CAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATATGCCACTGCCATGTTaGGCAGAAGTCCCCAATTAT +
Preference number: 4 (lower is better)
Translates to: QSVPQMSRQLLEVQIPANMPLPC*AEVPNY
Trigger: ATAATTGGGGACTTCTGCTCAACATGGCAGTGGCAT...ATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp TCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCATTCTCAATTTAGCATaGGCGGAGGCCCTTGGGATT +
Preference number: 4 (lower is better)
Translates to: STNVQTAAGGSNSSQYNSILNLA*AEALGI
Trigger: AATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAAT...GGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGCTCATCGAGAAAGATaGAATTCTAAGGGGATTAAG +
Preference number: 4 (lower is better)
Translates to: NAGEKGYQECLEGEMGEPAHRER*NSKGIK
Trigger: CTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGC...TGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CTAAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACACACAAACGAACAGTGCAGTCCCTaGGAGGCAGCTGAGAGTACG +
Preference number: 4 (lower is better)
Translates to: LKHRTKTRYRIKLERHTNEQCSP*EAAEST
Trigger: CGTACTCTCAGCTGCCTCTCAGGGACTGCACTGTTC...GTTTGTGTGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CTCTGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCGAAGCTTCGGGGACTTaGCAGACTGAGTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: LCVHISKIPKGSIFTRWSEASGT*QTESRA
Trigger: TGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTC...GCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CAATGTCTAGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATACAGAGCAGTTGAGATaGGGTCTAAGGACTAACAAG +
Preference number: 4 (lower is better)
Translates to: QCLETFSFVISGRGCHWHTEQLR*GLRTNK
Trigger: CTTGTTAGTCCTTAGACCTCATCTCAACTGCTCTGT...ATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCTAGACATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCATTCCCGAAATGCCTaGTATGTCACTGGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: AAGGSNSSQYNSNLTSFCHSRNA*YVTGLQ
Trigger: CTGAAGGCCAGTGACATATCAGGCATTTCGGGAATG...ACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498133.5
ENST00000543133.5
CDS-3UTR GCA 90 bp GTGCAGAGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGGCCAAACTGCAGCAGTaGGCTCAAAGGTTCTTGACC +
Preference number: 4 (lower is better)
Translates to: VQSLLIEKDEILRGLRAKAKLQQ*AQRFLT
Trigger: GGTCAAGAACCTTTGAGCGCACTGCTGCAGTTTGGC...CTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCTCTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000618481.4
CDS-3UTR GCA 90 bp TGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGCTGAATGATGTACTCTaGCGAATAGTCCTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: CHILLTQELTKSYQRKPMLNDVL*RIVLQV
Trigger: TACCTGGAGGACTATTCGGCAGAGTACATCATTCAG...CATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000618481.4
CDS-3UTR GCA 90 bp AGAAGTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGCTGAATGATGTACTCTaGCGAATAGTCCTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: RSPQLSQSVPQMSRQLLELNDVL*RIVLQV
Trigger: TACCTGGAGGACTATTCGGCAGAGTACATCATTCAG...CTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGACTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000618481.4
CDS-3UTR GCA 90 bp GCTCAGCCAATGGGTGTGAGGATCCAGAACTGGCAAGTGTTAATACTGGAACTCCTGAATGATGTACTCTaGCGAATAGTCCTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: AQPMGVRIQNWQVLILELLNDVL*RIVLQV
Trigger: TACCTGGAGGACTATTCGGCAGAGTACATCATTCAG...GAGTTCCAGTATTAACACTTGCCAGTTCTGGATCCTCACACCCATTGGCTGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000618481.4
CDS-3UTR GCA 90 bp ACTTCTTCAGGATCCATTGCAATCTGCTGCCAGGACTCAGGGCCTAGTGACACTGTCATTGCTATCTTCTaGAGTGATTCCAGGGTATTC +
Preference number: 4 (lower is better)
Translates to: TSSGSIAICCQDSGPSDTVIAIF*SDSRVF
Trigger: GAATACCCTGGAATCACTGCAGAAGATAGCAATGAC...AGTGTCACTAGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp AAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTGGTAAGCTCTCAGACTaGCAGGAAGTGGTCACAGTT +
Preference number: 4 (lower is better)
Translates to: KCPDSCWRFKFQPIQLQPGKLSD*QEVVTV
Trigger: AACTGTGACCACTTCCTGGCAGTCTGAGAGCTTACC...AGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TCTGTTAGCAATCAGATAGCCTACAAGGCCGTCTTGATGGGTATGATCACCACCTTCTTCAGGATCCATTaGAATCTGCTGCCAGGACTC +
Preference number: 4 (lower is better)
Translates to: SVSNQIAYKAVLMGMITTFFRIH*NLLPGL
Trigger: GAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAA...GGTGGTGATCATACCCATCAAGACGGCCTTGTAGGCTATCTGATTGCTAACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGTCTCTCCAGCTCCGTTaGTGTCTAAGCTTTTCACTT +
Preference number: 4 (lower is better)
Translates to: SDECECPTSSPNMPNMPLSLQLR*CLSFSL
Trigger: AAGTGAAAAGCTTAGACAGCAACGGAGCTGGAGAGA...CAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CAACTCTGGCTAGCTGACAGTGACACAGGTAAGCTCTCAGACTGCCAGGAAGTGTCTTCTTTCTCCACGTaGACAATGTCAGAATTAGAG +
Preference number: 4 (lower is better)
Translates to: QLWLADSDTGKLSDCQEVSSFST*TMSELE
Trigger: CTCTAATTCTGACATTGTGCACGTGGAGAAAGAAGA...CACTTCCTGGCAGTCTGAGAGCTTACCTGTGTCACTGTCAGCTAGCCAGAGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp ATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCAGTAGCTGAGTCAGGAAGTGCCTCTTaGAGCTCCCGCGCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: IEKDEILRGLRAKKSVAESGSAS*SSRAGK
Trigger: CTTGCCAGCGCGGGAGCTGCAAGAGGCACTTCCTGA...CTCAGCTACTGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACACACAAACATTTCTGTGGGTTCCAGTaGGGGGACCACCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: KTQNKDTLQDKAGKTHKHFCGFQ*GDHLLH
Trigger: GTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAA...ATGTTTGTGTGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGAAATGTCCAGACAGCTaGTGGAGGTTCAAATTCCAG +
Preference number: 4 (lower is better)
Translates to: SDECECPTSSPNMPNMPLKCPDS*WRFKFQ
Trigger: CTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTT...CAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTGCCTAACATGCCACTaGCATGTTGAGCAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: RQLLEVQIPANTTPTLHPCLTCH*HVEQKS
Trigger: GGACTTCTGCTCAACATGGCAGTGGCATGTTAGGCA...AGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GTGGAGGAATGTCTAACAGGTGGGAAAATAAAGCAGCAAGTAGCCGCTTCCATATGCCTAACATGCCACTaGCATGTTGAGCAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: VEECLTGGKIKQQVAASICLTCH*HVEQKS
Trigger: GGACTTCTGCTCAACATGGCAGTGGCATGTTAGGCA...TATGGAAGCGGCTACTTGCTGCTTTATTTTCCCACCTGTTAGACATTCCTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTCCTCAAGCCCTAACATaGCTAACATGCCACTGCCAT +
Preference number: 4 (lower is better)
Translates to: RQLLEVQIPANTTPTLHPPQALT*LTCHCH
Trigger: ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGG...AGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCTCAGATGAATGTGAATaGCCCACCTCAAGCCCTAAC +
Preference number: 4 (lower is better)
Translates to: STNVQTAAGGSNSSQYNSSDECE*PTSSPN
Trigger: GTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGA...GGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTTCCGGTCCTGGAGGGGGTaGTTTACCCCTAAGATTCTC +
Preference number: 4 (lower is better)
Translates to: WRFKFQPIQLQPYILLSFRSWRG*FTPKIL
Trigger: GAGAATCTTAGGGGTAAAGCACCCCCTCCAGGACCG...GAAAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACAGTGGGTGCAGAGCCTaGTCATCGAGAAAGATGAAA +
Preference number: 4 (lower is better)
Translates to: CPDSCWRFKFQPIQLQPYSGCRA*SSRKMK
Trigger: TTTCATCTTTCTCGATGAGCAGGCTCTGCACCCACT...GTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CTCTTCTCTCCAGCTCCGTTGCTGTCTAAGCTTTTCACTTCTTCAGGATCCATTAGAGTTACTTGCAGTTaGACTCACAAGTGGGGACCC +
Preference number: 4 (lower is better)
Translates to: LFSPAPLLSKLFTSSGSIRVTCS*THKWGP
Trigger: GGGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCT...AATGGATCCTGAAGAAGTGAAAAGCTTAGACAGCAACGGAGCTGGAGAGAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp TCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCCTAGCCAGAGTTACTTaGAGTTGCACTCACAAGTGG +
Preference number: 4 (lower is better)
Translates to: STNVQTAAGGSNSSQYNSLARVT*SCTHKW
Trigger: CCACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAG...GGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TCTGTTAGCAATCAGATAGCCTACAAGGCCGTCTTGATGGGTATGATCACCACCCTAGCCAGAGTTACTTaGAGTTGCACTCACAAGTGG +
Preference number: 4 (lower is better)
Translates to: SVSNQIAYKAVLMGMITTLARVT*SCTHKW
Trigger: CCACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAG...GGTGGTGATCATACCCATCAAGACGGCCTTGTAGGCTATCTGATTGCTAACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TCTCTTCTGAAAAGCCTCCTATTTCTTTCTCAGAGCCAGGGCTACCCCGATGGCGATAACGCACCAGTTTaGTCTTCACCTATGCAAACA +
Preference number: 4 (lower is better)
Translates to: SLLKSLLFLSQSQGYPDGDNAPV*SSPMQT
Trigger: TGTTTGCATAGGTGAAGAGCAAACTGGTGCGTTATC...GCCATCGGGGTAGCCCTGGCTCTGAGAAAGAAATAGGAGGCTTTTCAGAAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp GCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTCGATTGGTGCTTGAATaGGCTCAGCCAATGGGTGTG +
Preference number: 4 (lower is better)
Translates to: AGGSNSSQYNSNLTSFCLRLVLE*AQPMGV
Trigger: CACACCCATTGGCTGAGCGCATTCAAGCACCAATCG...AAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GTGCAGAGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGCGATTGGTGCTTGAATaGGCTCAGCCAATGGGTGTG +
Preference number: 4 (lower is better)
Translates to: VQSLLIEKDEILRGLRAKRLVLE*AQPMGV
Trigger: CACACCCATTGGCTGAGCGCATTCAAGCACCAATCG...CTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCTCTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GATTCTCAATTTAGCATGAGCGGAGGCCCTTGGGATTTACAGTCAGATGAATGTCCTGGCTTCGATTGGTaGTTGAATGCGCTCAGCCAA +
Preference number: 4 (lower is better)
Translates to: DSQFSMSGGPWDLQSDECPGFDW*LNALSQ
Trigger: TTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGG...ACATTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATGAAGAACAGGGATGCTaGCACATCCTGTTAACTCAG +
Preference number: 4 (lower is better)
Translates to: QSVPQMSRQLLEVQIPANEEQGC*HILLTQ
Trigger: CTGAGTTAACAGGATGTGGCAGCATCCCTGTTCTTC...ATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACAAGGAAGAACAGGGATaGTGCCACATCCTGTTAACT +
Preference number: 4 (lower is better)
Translates to: SQMNVNAPPQALTCLTCHKEEQG*CHILLT
Trigger: AGTTAACAGGATGTGGCAGCATCCCTGTTCTTCCTT...GTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GTGGAGGAATGTCTAACAGGTGGGAAAATAAAGCAGCAAGTAGCCGCTTCCATAGCAAAAAGCAGGAGCTaGAGTAGGAAGCAGTCCTCA +
Preference number: 4 (lower is better)
Translates to: VEECLTGGKIKQQVAASIAKSRS*SRKQSS
Trigger: TGAGGACTGCTTCCTACTGCAGCTCCTGCTTTTTGC...TATGGAAGCGGCTACTTGCTGCTTTATTTTCCCACCTGTTAGACATTCCTCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TGCTGTCTAAGCTTTTCACTTCTTCAGGATCCATTGCAATCTGCTGCCAGGACTGCAAAAAGCAGGAGCTaGAGTAGGAAGCAGTCCTCA +
Preference number: 4 (lower is better)
Translates to: CCLSFSLLQDPLQSAARTAKSRS*SRKQSS
Trigger: TGAGGACTGCTTCCTACTGCAGCTCCTGCTTTTTGC...AGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGTGAAAAGCTTAGACAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp GTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATGTTGAGGGCAAGGAGACTACTTaGCTTACTGTCATATTATTG +
Preference number: 4 (lower is better)
Translates to: VNAPPQALTCLTCHCHVEGKETT*LTVILL
Trigger: CAATAATATGACAGTAAGGCAAGTAGTCTCCTTGCC...CTCAACATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GATTCTCAATTTAGCATGAGCGGAGGCCCTTGGGATTTACAGTCAGATGAATGTGGCAGGGCTGAACACTaGAGAAGTGTGACGGTCAAA +
Preference number: 4 (lower is better)
Translates to: DSQFSMSGGPWDLQSDECGRAEH*RSVTVK
Trigger: TTTGACCGTCACACTTCTCCAGTGTTCAGCCCTGCC...ACATTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR CCA 90 bp TGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGGGCTCTTTCAGTTCCTaGGACACTTTTTCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: CHILLTQELTKSYQRKPMGSFSS*DTFSPR
Trigger: TCTTGGAGAAAAAGTGTCCCAGGAACTGAAAGAGCC...CATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTCTTATTCCAGCCGCTaGCATGAACTGTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: KCPDSCWRFKFQPIQLQPSYSSR*HELWSP
Trigger: TGGAGACCACAGTTCATGCCAGCGGCTGGAATAAGA...AGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317582.10
ENST00000498133.5
ENST00000543133.5
ENST00000618481.4
CDS-3UTR CCA 90 bp GTGGAGGAATGTCTAACAGGTGGGAAAATAAAGCAGCAAGTAGCCGCTTCCATATCTTATTCCAGCCGCTaGCATGAACTGTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: VEECLTGGKIKQQVAASISYSSR*HELWSP
Trigger: TGGAGACCACAGTTCATGCCAGCGGCTGGAATAAGA...TATGGAAGCGGCTACTTGCTGCTTTATTTTCCCACCTGTTAGACATTCCTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317582.10
ENST00000543133.5
ENST00000618481.4
CDS-3UTR CCA 90 bp CTAACAGGTGGGAAAATAAAGCAGCAAGTAGCCGCTTCCATACCACATTTCTTCCACAGTTGGAGACTCTaGGGGACTGACTTGTCCAGA +
Preference number: 4 (lower is better)
Translates to: LTGGKIKQQVAASIPHFFHSWRL*GTDLSR
Trigger: TCTGGACAAGTCAGTCCCCCAGAGTCTCCAACTGTG...GAAGAAATGTGGTATGGAAGCGGCTACTTGCTGCTTTATTTTCCCACCTGTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTTCTGTGTGCCAACTCTaGCTAGCTGACAGTGACACA +
Preference number: 4 (lower is better)
Translates to: AAGGSNSSQYNSNLTSFCSVCQL*LADSDT
Trigger: TGTGTCACTGTCAGCTAGCCAGAGTTGGCACACAGA...ACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CTCCAGCTCCGTTGCTGTCTAAGCTTTTCACTTCTTCAGGATCCATTGCAATCTTGTCCAGACAGCTGCTaGAGGTTCAAATTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: LQLRCCLSFSLLQDPLQSCPDSC*RFKFQP
Trigger: TGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACA...AGATTGCAATGGATCCTGAAGAAGTGAAAAGCTTAGACAGCAACGGAGCTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp TCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCATGAGCGGAGGCCCTTaGGATTTACAGTCAGATGAA +
Preference number: 4 (lower is better)
Translates to: STNVQTAAGGSNSSQYNSMSGGP*DLQSDE
Trigger: TTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCAT...GGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATATGAGCGGAGGCCCTTaGGATTTACAGTCAGATGAA +
Preference number: 4 (lower is better)
Translates to: QSVPQMSRQLLEVQIPANMSGGP*DLQSDE
Trigger: TTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCAT...ATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGCTAAGTTCTCTCAGCTaGGAATTTCTATCCCAATTC +
Preference number: 4 (lower is better)
Translates to: RDIFVCHLWEGVPLASSGLSSLS*EFLSQF
Trigger: GAATTGGGATAGAAATTCCCAGCTGAGAGAACTTAG...CCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GGAGGCCCTTGGGATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTCTAAGTTCTCTCAGCTaGGAATTTCTATCCCAATTC +
Preference number: 4 (lower is better)
Translates to: GGPWDLQSDECECPTSSPLSSLS*EFLSQF
Trigger: GAATTGGGATAGAAATTCCCAGCTGAGAGAACTTAG...AGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATCCCAAGGGCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTCAACCTAAGTTCTCTCAGCTaGGAATTTCTATCCCAATTC +
Preference number: 4 (lower is better)
Translates to: RRGIKNASRGRWVNQKVNLSSLS*EFLSQF
Trigger: GAATTGGGATAGAAATTCCCAGCTGAGAGAACTTAG...GTTGACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CTATCCCAATTCTTCCTAAGTAAACCCTCTCTCGCTAAAGCAGTGGGTCTCAATGAACCTGGCTTCGATTaGTGCTTGAATGCGCTCAGC +
Preference number: 4 (lower is better)
Translates to: LSQFFLSKPSLAKAVGLNEPGFD*CLNALS
Trigger: GCTGAGCGCATTCAAGCACCAATCGAAGCCAGGTTC...ATTGAGACCCACTGCTTTAGCGAGAGAGGGTTTACTTAGGAAGAATTGGGATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CTAACAGGTGGGAAAATAAAGCAGCAAGTAGCCGCTTCCATACCACATTTCTTCGAACCTGGCTTCGATTaGTGCTTGAATGCGCTCAGC +
Preference number: 4 (lower is better)
Translates to: LTGGKIKQQVAASIPHFFEPGFD*CLNALS
Trigger: GCTGAGCGCATTCAAGCACCAATCGAAGCCAGGTTC...GAAGAAATGTGGTATGGAAGCGGCTACTTGCTGCTTTATTTTCCCACCTGTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GTGCAGAGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGGAACCTGGCTTCGATTaGTGCTTGAATGCGCTCAGC +
Preference number: 4 (lower is better)
Translates to: VQSLLIEKDEILRGLRAKEPGFD*CLNALS
Trigger: GCTGAGCGCATTCAAGCACCAATCGAAGCCAGGTTC...CTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCTCTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CTCAGAGATGAACCTGGCTTCGATTGGTGCTTGAATGCGCTCAGCCAATGGGTGGGAATGTCTAACAGGTaGGAAAATAAAGCAGCAAGT +
Preference number: 4 (lower is better)
Translates to: LRDEPGFDWCLNALSQWVGMSNR*ENKAAS
Trigger: ACTTGCTGCTTTATTTTCCCACCTGTTAGACATTCC...CACCCATTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGGTTCATCTCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp ACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGGAATGTCTAACAGGTaGGAAAATAAAGCAGCAAGT +
Preference number: 4 (lower is better)
Translates to: TFSFVISGRGCHWHLVGGGMSNR*ENKAAS
Trigger: ACTTGCTGCTTTATTTTCCCACCTGTTAGACATTCC...TCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGACCAGAGAAAGCCAATaGAAAACACTATCTAGTTCC +
Preference number: 4 (lower is better)
Translates to: RDIFVCHLWEGVPLASSGTRESQ*KTLSSS
Trigger: GGAACTAGATAGTGTTTTCCATTGGCTTTCTCTGGT...CCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp TCTGTTAGCAATCAGATAGCCTACAAGGCCGTCTTGATGGGTATGATCACCACCGGTATAAGTTGGAGGTaGAAGGAATGGCCTCCTACT +
Preference number: 4 (lower is better)
Translates to: SVSNQIAYKAVLMGMITTGISWR*KEWPPT
Trigger: AGTAGGAGGCCATTCCTTCCACCTCCAACTTATACC...GGTGGTGATCATACCCATCAAGACGGCCTTGTAGGCTATCTGATTGCTAACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp TCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCATTAGAGGGTATAAGTTaGAGGTGGAAGGAATGGCCT +
Preference number: 4 (lower is better)
Translates to: SPIIPECSTNVQTAAGGSLEGIS*RWKEWP
Trigger: AGGCCATTCCTTCCACCTCCAACTTATACCCTCTAA...TGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTGCATCTGGTATCCCTaGGACAGAAATGCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: RQLLEVQIPANTTPTLHPCIWYP*DRNAGE
Trigger: CTCACCTGCATTTCTGTCCCAGGGATACCAGATGCA...AGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTGGTAGTGGCTGCATCTaGTATCCCTGGGACAGAAAT +
Preference number: 4 (lower is better)
Translates to: KCPDSCWRFKFQPIQLQPGSGCI*YPWDRN
Trigger: ATTTCTGTCCCAGGGATACCAGATGCAGCCACTACC...AGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GTGGAGGAATGTCTAACAGGTGGGAAAATAAAGCAGCAAGTAGCCGCTTCCATAGCTTGTGTGGGAATTTaGGCAGAAGCTCTAGGTCGT +
Preference number: 4 (lower is better)
Translates to: VEECLTGGKIKQQVAASIACVGI*AEALGR
Trigger: ACGACCTAGAGCTTCTGCCCAAATTCCCACACAAGC...TATGGAAGCGGCTACTTGCTGCTTTATTTTCCCACCTGTTAGACATTCCTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AGAAGTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGAGATAATGCTTGTGTaGGAATTTGGGCAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: RSPQLSQSVPQMSRQLLEEIMLV*EFGQKL
Trigger: GAGCTTCTGCCCAAATTCCCACACAAGCATTATCTC...CTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGACTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACGAGATAATGCTTGTGTaGGAATTTGGGCAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: SQMNVNAPPQALTCLTCHEIMLV*EFGQKL
Trigger: GAGCTTCTGCCCAAATTCCCACACAAGCATTATCTC...GTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp ATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATGAGATAATGCTTGTGTaGGAATTTGGGCAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: MNVNAPPQALTCLTCHCHEIMLV*EFGQKL
Trigger: GAGCTTCTGCCCAAATTCCCACACAAGCATTATCTC...ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp TCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGGAGATAATGCTTGTGTaGGAATTTGGGCAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: SDECECPTSSPNMPNMPLEIMLV*EFGQKL
Trigger: GAGCTTCTGCCCAAATTCCCACACAAGCATTATCTC...CAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGGAGGAGTCCCAAGTAGCTaGGAACAACATACTTTGTTT +
Preference number: 4 (lower is better)
Translates to: PHPVNSGADQELPEKANGGVPSS*EQHTLF
Trigger: AAACAAAGTATGTTGTTCTCAGCTACTTGGGACTCC...TCCATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000616863.4
CDS-3UTR TCA 90 bp GCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTTTGAACCCCTTGGGGTaGGGAAAGATGTTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: AGGSNSSQYNSNLTSFCLLNPLG*GKMLLL
Trigger: CAAGAGCAACATCTTTCCTCACCCCAAGGGGTTCAA...AAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000498133.5
ENST00000543133.5
ENST00000616863.4
CDS-3UTR TCA 90 bp TGCTGTCTAAGCTTTTCACTTCTTCAGGATCCATTGCAATCTGCTGCCAGGACTGAAGCTATATCTAGTTaGACCCCTTGGGGTGAGGAA +
Preference number: 4 (lower is better)
Translates to: CCLSFSLLQDPLQSAARTEAISS*TPWGEE
Trigger: TTCCTCACCCCAAGGGGTTCAACTAGATATAGCTTC...AGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGTGAAAAGCTTAGACAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000498133.5
ENST00000616863.4
CDS-3UTR TCA 90 bp GATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACGAAGCTATATCTAGTTaGACCCCTTGGGGTGAGGAA +
Preference number: 4 (lower is better)
Translates to: DLQSDECECPTSSPNMPNEAISS*TPWGEE
Trigger: TTCCTCACCCCAAGGGGTTCAACTAGATATAGCTTC...GTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000498133.5
ENST00000543133.5
ENST00000616863.4
CDS-3UTR TCA 90 bp GTGAACCAGAAGGTCAACAGTTGCATTTCTTCATCTAGAATGTTCTCTAGAAGGCTGGATTGGCAGGGCTaGACACTGGAGAAGTGTGAC +
Preference number: 4 (lower is better)
Translates to: VNQKVNSCISSSRMFSRRLDWQG*TLEKCD
Trigger: GTCACACTTCTCCAGTGTTCAGCCCTGCCAATCCAG...CCTTCTAGAGAACATTCTAGATGAAGAAATGCAACTGTTGACCTTCTGGTTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTCAAGCAGTCTTCCATTaGGCTTTCTGGATTGGCAGG +
Preference number: 4 (lower is better)
Translates to: AGGSNSSQYNSNLTSFCLQAVFH*AFWIGR
Trigger: CCTGCCAATCCAGAAAGCTCAATGGAAGACTGCTTG...AAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR TCA 90 bp ATCATGATAGTAGGCTATAACTCAAGTTTCAATGCCACGATGGTCGTGCTTTCTTTCCAGCCGCTGGCATaGACTGTGGTCTCCAGTGTA +
Preference number: 4 (lower is better)
Translates to: IMIVGYNSSFNATMVVLSFQPLA*TVVSSV
Trigger: TACACTGGAGACCACAGTTCATGCCAGCGGCTGGAA...AGAAAGCACGACCATCGTGGCATTGAAACTTGAGTTATAGCCTACTATCATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS-3UTR TCA 90 bp GTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTAGCCACCTTGCTGAATaGTGTACTCTGCCGAATAGT +
Preference number: 4 (lower is better)
Translates to: VPQMSRQLLEVQIPANTTSHLAE*CTLPNS
Trigger: ACTATTCGGCAGAGTACATCATTCAGCAAGGTGGCT...AGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000618481.4
CDS-3UTR TCA 90 bp AGTTGTTGCTGCTTTCACCTCTTCTTCATCAAGTTCTACAAACAGAGATGTAGCCCCCAGCCACCTTGCTaGATGATGTACTCTGCCGAA +
Preference number: 4 (lower is better)
Translates to: SCCCFHLFFIKFYKQRCSPQPPC*MMYSAE
Trigger: TTCGGCAGAGTACATCATTCAGCAAGGTGGCTGGGG...GCTACATCTCTGTTTGTAGAACTTGATGAAGAAGAGGTGAAAGCAGCAACAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
CDS-3UTR TCA 90 bp CAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATGTATTCCTCCTCCTCTaGCTCAAGACTAAACACAGT +
Preference number: 4 (lower is better)
Translates to: QSVPQMSRQLLEVQIPANVFLLL*LKTKHS
Trigger: ACTGTGTTTAGTCTTGAGTCAGAGGAGGAGGAATAC...ATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GTGGAGGAATGTCTAACAGGTGGGAAAATAAAGCAGCAAGTAGCCGCTTCCATATGCTATCTTCTGCAGTaGTTCCAGGGTATTCCTCCT +
Preference number: 4 (lower is better)
Translates to: VEECLTGGKIKQQVAASICYLLQ*FQGIPP
Trigger: AGGAGGAATACCCTGGAATCACTGCAGAAGATAGCA...TATGGAAGCGGCTACTTGCTGCTTTATTTTCCCACCTGTTAGACATTCCTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CTCTTCTCTCCAGCTCCGTTGCTGTCTAAGCTTTTCACTTCTTCAGGATCCATTTGCTATCTTCTGCAGTaGTTCCAGGGTATTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LFSPAPLLSKLFTSSGSICYLLQ*FQGIPP
Trigger: AGGAGGAATACCCTGGAATCACTGCAGAAGATAGCA...AATGGATCCTGAAGAAGTGAAAAGCTTAGACAGCAACGGAGCTGGAGAGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp AGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGGATTTCTCAACTGTaGTCACTTCTGTGTCAGGTT +
Preference number: 4 (lower is better)
Translates to: SQMNVNAPPQALTCLTCHWISQL*SLLCQV
Trigger: AACCTGACACAGAAGTGATCACAGTTGAGAAATCCA...GTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AAGCTTTTCACTTCTTCAGGATCCATTGCAATCTGCTGCCAGGACTCAGGGCCTTGGATTTCTCAACTGTaGTCACTTCTGTGTCAGGTT +
Preference number: 4 (lower is better)
Translates to: KLFTSSGSIAICCQDSGPWISQL*SLLCQV
Trigger: AACCTGACACAGAAGTGATCACAGTTGAGAAATCCA...AGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGTGAAAAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp GATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATGTTaGGCAGAAGTCCCCAATTAT +
Preference number: 4 (lower is better)
Translates to: DLQSDECECPTSSPNMPNMPLPC*AEVPNY
Trigger: ATAATTGGGGACTTCTGCTCAACATGGCAGTGGCAT...GTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp ATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATCTAGTTCCATTACCGTaGAATACAACTGGCCAAATC +
Preference number: 4 (lower is better)
Translates to: MNVNAPPQALTCLTCHCHLVPLP*NTTGQI
Trigger: GATTTGGCCAGTTGTATTTCACGGTAATGGAACTAG...ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp TCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCACTAGTTCCATTACCGTaGAATACAACTGGCCAAATC +
Preference number: 4 (lower is better)
Translates to: SPIIPECSTNVQTAAGGSLVPLP*NTTGQI
Trigger: GATTTGGCCAGTTGTATTTCACGGTAATGGAACTAG...TGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp TCTGTTAGCAATCAGATAGCCTACAAGGCCGTCTTGATGGGTATGATCACCACCACAGAGCAGTTGAGATaGGGTCTAAGGACTAACAAG +
Preference number: 4 (lower is better)
Translates to: SVSNQIAYKAVLMGMITTTEQLR*GLRTNK
Trigger: CTTGTTAGTCCTTAGACCTCATCTCAACTGCTCTGT...GGTGGTGATCATACCCATCAAGACGGCCTTGTAGGCTATCTGATTGCTAACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp TTTCTCTGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGGCACACCGCAGGTACTaGCTGATTTCTGTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: FLCVHISKIPKGSIFTRWAHRRY*LISVGP
Trigger: TGGGCCCACAGAAATCAGTCAGTACCTGCGGTGTGC...CCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACAGAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GTGAACCAGAAGGTCAACAGTTGCATTTCTTCATCTAGAATGTTCTCTAGAAGGCGAGGGGGAGATGGGTaGACCAGAAGGTCAACAGTT +
Preference number: 4 (lower is better)
Translates to: VNQKVNSCISSSRMFSRRRGGDG*TRRSTV
Trigger: AACTGTTGACCTTCTGGTTCACCCATCTCCCCCTCG...CCTTCTAGAGAACATTCTAGATGAAGAAATGCAACTGTTGACCTTCTGGTTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTTACTGTCATATTATTaGGGGAATCAGCGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: SQMNVNAPPQALTCLTCHLLSYY*GNQRKA
Trigger: GGCTTTGCGCTGATTCCCTCAATAATATGACAGTAA...GTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGGATTACTGTCATATTATTaGGGGAATCAGCGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: PHPVNSGADQELPEKANGLLSYY*GNQRKA
Trigger: GGCTTTGCGCTGATTCCCTCAATAATATGACAGTAA...TCCATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCACTCTCCGTCCAGATGTaGCCTGAAGACCCAAACCCT +
Preference number: 4 (lower is better)
Translates to: SLLIEKDEILRGLRAKKSLSVQM*PEDPNP
Trigger: AGGGTTTGGGTCTTCAGGTCACATCTGGACGGAGAG...TGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCACAGGAGCATTTGCAATaGTTTATGGAGAGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: SPIIPECSTNVQTAAGGSQEHLQ*FMERLF
Trigger: AAAGAGCCTCTCCATAAAGCATTGCAAATGCTCCTG...TGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCCTGAATGATGTACTCTaGCGAATAGTCCTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: STNVQTAAGGSNSSQYNSLNDVL*RIVLQV
Trigger: TACCTGGAGGACTATTCGGCAGAGTACATCATTCAG...GGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000618481.4
CDS-3UTR GCA 90 bp GCTCAGCCAATGGGTGTGAGGATCCAGAACTGGCAAGTGTTAATACTGGAACTCGTCATTGCTATCTTCTaGAGTGATTCCAGGGTATTC +
Preference number: 4 (lower is better)
Translates to: AQPMGVRIQNWQVLILELVIAIF*SDSRVF
Trigger: GAATACCCTGGAATCACTGCAGAAGATAGCAATGAC...GAGTTCCAGTATTAACACTTGCCAGTTCTGGATCCTCACACCCATTGGCTGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACGTCATTGCTATCTTCTaGAGTGATTCCAGGGTATTC +
Preference number: 4 (lower is better)
Translates to: SQMNVNAPPQALTCLTCHVIAIF*SDSRVF
Trigger: GAATACCCTGGAATCACTGCAGAAGATAGCAATGAC...GTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTGGTAAGCTCTCAGACTaGCAGGAAGTGGTCACAGTT +
Preference number: 4 (lower is better)
Translates to: CWRFKFQPIQLQPYILLSGKLSD*QEVVTV
Trigger: AACTGTGACCACTTCCTGGCAGTCTGAGAGCTTACC...AGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GTGAACCAGAAGGTCAACAGTTGCATTTCTTCATCTAGAATGTTCTCTAGAAGGGGATCCATTGCAATCTaGTGCCAGGACTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: VNQKVNSCISSSRMFSRRGSIAI*CQDSGP
Trigger: AGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCC...CCTTCTAGAGAACATTCTAGATGAAGAAATGCAACTGTTGACCTTCTGGTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTTCTTCAGGATCCATTaGAATCTGCTGCCAGGACTC +
Preference number: 4 (lower is better)
Translates to: KCPDSCWRFKFQPIQLQPFFRIH*NLLPGL
Trigger: GAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAA...AGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TGCTGTCTAAGCTTTTCACTTCTTCAGGATCCATTGCAATCTGCTGCCAGGACTTTCTTCAGGATCCATTaGAATCTGCTGCCAGGACTC +
Preference number: 4 (lower is better)
Translates to: CCLSFSLLQDPLQSAARTFFRIH*NLLPGL
Trigger: GAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAA...AGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGTGAAAAGCTTAGACAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp GCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTTTCTTCAGGATCCATTaGAATCTGCTGCCAGGACTC +
Preference number: 4 (lower is better)
Translates to: AAGGSNSSQYNSNLTSFCFFRIH*NLLPGL
Trigger: GAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAA...ACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATTCTCTCCAGCTCCGTTaGTGTCTAAGCTTTTCACTT +
Preference number: 4 (lower is better)
Translates to: QSVPQMSRQLLEVQIPANSLQLR*CLSFSL
Trigger: AAGTGAAAAGCTTAGACAGCAACGGAGCTGGAGAGA...ATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CAGAAGTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAAGGTTCAGTTGTTGCTaGTTTCACCTCTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: QKSPIIPECSTNVQTAAGRFSCC*FHLFFI
Trigger: GATGAAGAAGAGGTGAAAGCAGCAACAACTGAACCT...TCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGACTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AAGCTTTTCACTTCTTCAGGATCCATTGCAATCTGCTGCCAGGACTCAGGGCCTAGGTTCAGTTGTTGCTaGTTTCACCTCTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: KLFTSSGSIAICCQDSGPRFSCC*FHLFFI
Trigger: GATGAAGAAGAGGTGAAAGCAGCAACAACTGAACCT...AGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGTGAAAAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp CCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGGAAGGTTCAGTTGTTGCTaGTTTCACCTCTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: PHPVNSGADQELPEKANGRFSCC*FHLFFI
Trigger: GATGAAGAAGAGGTGAAAGCAGCAACAACTGAACCT...TCCATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATAAGGCTCTCTTCCCTTaGGTTTATCTCCTTCTCACT +
Preference number: 4 (lower is better)
Translates to: QSVPQMSRQLLEVQIPANKALFP*VYLLLT
Trigger: AGTGAGAAGGAGATAAACGCAAGGGAAGAGAGCCTT...ATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GATTCTCAATTTAGCATGAGCGGAGGCCCTTGGGATTTACAGTCAGATGAATGTTGCCTAACATGCCACTaGCATGTTGAGCAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: DSQFSMSGGPWDLQSDECCLTCH*HVEQKS
Trigger: GGACTTCTGCTCAACATGGCAGTGGCATGTTAGGCA...ACATTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GAATTAGAGGAGTTGTTCTCACTCTTCTCTCCAGCTCCGTTGCTGTCTAAGCTTCTAACATGCCTAACATaGCACTGCCATGTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: ELEELFSLFSPAPLLSKLLTCLT*HCHVEQ
Trigger: CTGCTCAACATGGCAGTGGCATGTTAGGCATGTTAG...AAGCTTAGACAGCAACGGAGCTGGAGAGAAGAGTGAGAACAACTCCTCTAATTC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp GATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACTCAGATGAATGTGAATaGCCCACCTCAAGCCCTAAC +
Preference number: 4 (lower is better)
Translates to: DLQSDECECPTSSPNMPNSDECE*PTSSPN
Trigger: GTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGA...GTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CTCCAGCTCCGTTGCTGTCTAAGCTTTTCACTTCTTCAGGATCCATTGCAATCTTCAGATGAATGTGAATaGCCCACCTCAAGCCCTAAC +
Preference number: 4 (lower is better)
Translates to: LQLRCCLSFSLLQDPLQSSDECE*PTSSPN
Trigger: GTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGA...AGATTGCAATGGATCCTGAAGAAGTGAAAAGCTTAGACAGCAACGGAGCTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp AGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCACGGTCCTGGAGGGGGTaGTTTACCCCTAAGATTCTC +
Preference number: 4 (lower is better)
Translates to: SLLIEKDEILRGLRAKKSRSWRG*FTPKIL
Trigger: GAGAATCTTAGGGGTAAAGCACCCCCTCCAGGACCG...TGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TTCTCCACGTGCACAATGTCAGAATTAGAGGAGTTGTTCTCACTCTTCTCTCCAAGAGTTACTTGCAGTTaGACTCACAAGTGGGGACCC +
Preference number: 4 (lower is better)
Translates to: FSTCTMSELEELFSLFSPRVTCS*THKWGP
Trigger: GGGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCT...TGGAGAGAAGAGTGAGAACAACTCCTCTAATTCTGACATTGTGCACGTGGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp GATTCTCAATTTAGCATGAGCGGAGGCCCTTGGGATTTACAGTCAGATGAATGTAGAGTTACTTGCAGTTaGACTCACAAGTGGGGACCC +
Preference number: 4 (lower is better)
Translates to: DSQFSMSGGPWDLQSDECRVTCS*THKWGP
Trigger: GGGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCT...ACATTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CTAACAGGTGGGAAAATAAAGCAGCAAGTAGCCGCTTCCATACCACATTTCTTCAGAGTTACTTGCAGTTaGACTCACAAGTGGGGACCC +
Preference number: 4 (lower is better)
Translates to: LTGGKIKQQVAASIPHFFRVTCS*THKWGP
Trigger: GGGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCT...GAAGAAATGTGGTATGGAAGCGGCTACTTGCTGCTTTATTTTCCCACCTGTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTCTAGCCAGAGTTACTTaGAGTTGCACTCACAAGTGG +
Preference number: 4 (lower is better)
Translates to: RQLLEVQIPANTTPTLHPLARVT*SCTHKW
Trigger: CCACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAG...AGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAGGAAAGAAAATTATaGCGATGCTCAACTAGCATA +
Preference number: 4 (lower is better)
Translates to: NAGEKGYQECLEGEMGEPEERKL*RCSTSI
Trigger: TATGCTAGTTGAGCATCGGCATAATTTTCTTTCCTC...TGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGGATAACGCACCAGTTTaGTCTTCACCTATGCAAACA +
Preference number: 4 (lower is better)
Translates to: CHILLTQELTKSYQRKPMDNAPV*SSPMQT
Trigger: TGTTTGCATAGGTGAAGAGCAAACTGGTGCGTTATC...CATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TGGGACACTAAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACACCTGGCTTCGATTGGTaGTTGAATGCGCTCAGCCAA +
Preference number: 4 (lower is better)
Translates to: WDTKTQNKDTLQDKAGKTPGFDW*LNALSQ
Trigger: TTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGG...TGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTTAGTGTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTTCAAGGGGTATCAAGAATaGCTCGAGGGGGAGATGGGT +
Preference number: 4 (lower is better)
Translates to: WRFKFQPIQLQPYILLSFKGYQE*LEGEMG
Trigger: ACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTT...GAAAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTAGGACGCCATTGAATTaGCTGGTGAGGCTCCAAAAA +
Preference number: 4 (lower is better)
Translates to: KCPDSCWRFKFQPIQLQPRTPLN*LVRLQK
Trigger: TTTTTGGAGCCTCACCAGCCAATTCAATGGCGTCCT...AGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000616863.4
CDS-3UTR CCA 90 bp TCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGACTTTTTCTCCAAGATaGGCCAAGCAGTCTTCCATT +
Preference number: 4 (lower is better)
Translates to: SDECECPTSSPNMPNMPLTFSPR*AKQSSI
Trigger: AATGGAAGACTGCTTGGCCCATCTTGGAGAAAAAGT...CAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCAGGAAGTGGTCACAGTTaGAGACTCTGGGGGACTGAC +
Preference number: 4 (lower is better)
Translates to: SLLIEKDEILRGLRAKKSGSGHS*RLWGTD
Trigger: GTCAGTCCCCCAGAGTCTCCAACTGTGACCACTTCC...TGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CTAAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACACACAAACGGAAGTGGTCACAGTTaGAGACTCTGGGGGACTGAC +
Preference number: 4 (lower is better)
Translates to: LKHRTKTRYRIKLERHTNGSGHS*RLWGTD
Trigger: GTCAGTCCCCCAGAGTCTCCAACTGTGACCACTTCC...GTTTGTGTGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp TGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTTCCAGACTGCCAGGAAGTaGTCACAGTTGGAGACTCTG +
Preference number: 4 (lower is better)
Translates to: WRFKFQPIQLQPYILLSFQTARK*SQLETL
Trigger: CAGAGTCTCCAACTGTGACCACTTCCTGGCAGTCTG...GAAAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GATTCTCAATTTAGCATGAGCGGAGGCCCTTGGGATTTACAGTCAGATGAATGTTGTCCAGACAGCTGCTaGAGGTTCAAATTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: DSQFSMSGGPWDLQSDECCPDSC*RFKFQP
Trigger: TGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACA...ACATTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTATGAGCGGAGGCCCTTaGGATTTACAGTCAGATGAA +
Preference number: 4 (lower is better)
Translates to: KCPDSCWRFKFQPIQLQPMSGGP*DLQSDE
Trigger: TTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCAT...AGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AGAAGTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTGAGGATCCAGAACTaGCAAGTGTTAATACTGGAA +
Preference number: 4 (lower is better)
Translates to: RSPQLSQSVPQMSRQLLEVRIQN*QVLILE
Trigger: TTCCAGTATTAACACTTGCCAGTTCTGGATCCTCAC...CTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGACTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp TCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGGTGAGGATCCAGAACTaGCAAGTGTTAATACTGGAA +
Preference number: 4 (lower is better)
Translates to: SDECECPTSSPNMPNMPLVRIQN*QVLILE
Trigger: TTCCAGTATTAACACTTGCCAGTTCTGGATCCTCAC...CAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGGAGTGAGGATCCAGAACTaGCAAGTGTTAATACTGGAA +
Preference number: 4 (lower is better)
Translates to: PHPVNSGADQELPEKANGVRIQN*QVLILE
Trigger: TTCCAGTATTAACACTTGCCAGTTCTGGATCCTCAC...TCCATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp TCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCAGTGAGGATCCAGAACTaGCAAGTGTTAATACTGGAA +
Preference number: 4 (lower is better)
Translates to: SPIIPECSTNVQTAAGGSVRIQN*QVLILE
Trigger: TTCCAGTATTAACACTTGCCAGTTCTGGATCCTCAC...TGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AAGCTTTTCACTTCTTCAGGATCCATTGCAATCTGCTGCCAGGACTCAGGGCCTGTGAGGATCCAGAACTaGCAAGTGTTAATACTGGAA +
Preference number: 4 (lower is better)
Translates to: KLFTSSGSIAICCQDSGPVRIQN*QVLILE
Trigger: TTCCAGTATTAACACTTGCCAGTTCTGGATCCTCAC...AGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGTGAAAAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp TGGGACACTAAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACAGAACCTGGCTTCGATTaGTGCTTGAATGCGCTCAGC +
Preference number: 4 (lower is better)
Translates to: WDTKTQNKDTLQDKAGKTEPGFD*CLNALS
Trigger: GCTGAGCGCATTCAAGCACCAATCGAAGCCAGGTTC...TGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTTAGTGTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CAATGTCTAGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATTATTCTTTCCTTTCGTaGGCAACACAGGCTCCAATT +
Preference number: 4 (lower is better)
Translates to: QCLETFSFVISGRGCHWHYSFLS*ATQAPI
Trigger: AATTGGAGCCTGTGTTGCCCACGAAAGGAAAGAATA...ATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCTAGACATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp ATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATTATTCTTTCCTTTCGTaGGCAACACAGGCTCCAATT +
Preference number: 4 (lower is better)
Translates to: MNVNAPPQALTCLTCHCHYSFLS*ATQAPI
Trigger: AATTGGAGCCTGTGTTGCCCACGAAAGGAAAGAATA...ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp TCTCTTCTGAAAAGCCTCCTATTTCTTTCTCAGAGCCAGGGCTACCCCGATGGCACCAGAGAAAGCCAATaGAAAACACTATCTAGTTCC +
Preference number: 4 (lower is better)
Translates to: SLLKSLLFLSQSQGYPDGTRESQ*KTLSSS
Trigger: GGAACTAGATAGTGTTTTCCATTGGCTTTCTCTGGT...GCCATCGGGGTAGCCCTGGCTCTGAGAAAGAAATAGGAGGCTTTTCAGAAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp TGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTTCTGGAGGTGGAAGGAATaGCCTCCTACTATCAGCTCC +
Preference number: 4 (lower is better)
Translates to: WRFKFQPIQLQPYILLSFWRWKE*PPTISS
Trigger: GGAGCTGATAGTAGGAGGCCATTCCTTCCACCTCCA...GAAAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTGGTATAAGTTGGAGGTaGAAGGAATGGCCTCCTACT +
Preference number: 4 (lower is better)
Translates to: KCPDSCWRFKFQPIQLQPGISWR*KEWPPT
Trigger: AGTAGGAGGCCATTCCTTCCACCTCCAACTTATACC...AGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATTTAGAGGGTATAAGTTaGAGGTGGAAGGAATGGCCT +
Preference number: 4 (lower is better)
Translates to: QSVPQMSRQLLEVQIPANLEGIS*RWKEWP
Trigger: AGGCCATTCCTTCCACCTCCAACTTATACCCTCTAA...ATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp TTTCTCTGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGGCCTCGAGGGGGAGATaGGTGAACCAGAAGGTCAAC +
Preference number: 4 (lower is better)
Translates to: FLCVHISKIPKGSIFTRWASRGR*VNQKVN
Trigger: GTTGACCTTCTGGTTCACCCATCTCCCCCTCGAGGC...CCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACAGAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp TTCTCCACGTGCACAATGTCAGAATTAGAGGAGTTGTTCTCACTCTTCTCTCCATGCATCTGGTATCCCTaGGACAGAAATGCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: FSTCTMSELEELFSLFSPCIWYP*DRNAGE
Trigger: CTCACCTGCATTTCTGTCCCAGGGATACCAGATGCA...TGGAGAGAAGAGTGAGAACAACTCCTCTAATTCTGACATTGTGCACGTGGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp CTATCCCAATTCTTCCTAAGTAAACCCTCTCTCGCTAAAGCAGTGGGTCTCAATGGTAGTGGCTGCATCTaGTATCCCTGGGACAGAAAT +
Preference number: 4 (lower is better)
Translates to: LSQFFLSKPSLAKAVGLNGSGCI*YPWDRN
Trigger: ATTTCTGTCCCAGGGATACCAGATGCAGCCACTACC...ATTGAGACCCACTGCTTTAGCGAGAGAGGGTTTACTTAGGAAGAATTGGGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTGCTTGTGTGGGAATTTaGGCAGAAGCTCTAGGTCGT +
Preference number: 4 (lower is better)
Translates to: AGGSNSSQYNSNLTSFCLACVGI*AEALGR
Trigger: ACGACCTAGAGCTTCTGCCCAAATTCCCACACAAGC...AAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CTAACAGGTGGGAAAATAAAGCAGCAAGTAGCCGCTTCCATACCACATTTCTTCGCTTGTGTGGGAATTTaGGCAGAAGCTCTAGGTCGT +
Preference number: 4 (lower is better)
Translates to: LTGGKIKQQVAASIPHFFACVGI*AEALGR
Trigger: ACGACCTAGAGCTTCTGCCCAAATTCCCACACAAGC...GAAGAAATGTGGTATGGAAGCGGCTACTTGCTGCTTTATTTTCCCACCTGTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp ATCATGATAGTAGGCTATAACTCAAGTTTCAATGCCACGATGGTCGTGCTTTCTCAGGCTGGAATGCAGTaGTGCCATCTTGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: IMIVGYNSSFNATMVVLSQAGMQ*CHLGSL
Trigger: CAGTGAGCCAAGATGGCACCACTGCATTCCAGCCTG...AGAAAGCACGACCATCGTGGCATTGAAACTTGAGTTATAGCCTACTATCATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493680.5
3UTR CAA 72 bp TCTTTCTCCACGTGCACAATGTCAGAATTAGAGGAGTaGTTCTCACTCTTCTCTCCAGCTCCGTTGCTGTCT +
Preference number: 4 (lower is better)
Translates to: SFSTCTMSELEE*FSLFSPAPLLS
Trigger: AGACAGCAACGGAGCTGGAGAGAAGAGTGAGAACAACTCCTCTAATTCTGACATTGTGCACGTGGAGAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp CTCTGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTTGAACCCCTTGGGGTaGGGAAAGATGTTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: LCVHISKIPKGSIFTRWSLNPLG*GKMLLL
Trigger: CAAGAGCAACATCTTTCCTCACCCCAAGGGGTTCAA...GCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000498133.5
ENST00000543133.5
ENST00000616863.4
CDS-3UTR TCA 90 bp TGGGACACTAAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACATTGAACCCCTTGGGGTaGGGAAAGATGTTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: WDTKTQNKDTLQDKAGKTLNPLG*GKMLLL
Trigger: CAAGAGCAACATCTTTCCTCACCCCAAGGGGTTCAA...TGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTTAGTGTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000543133.5
ENST00000616863.4
CDS-3UTR TCA 90 bp ATCATGATAGTAGGCTATAACTCAAGTTTCAATGCCACGATGGTCGTGCTTTCTAACACTGGAGAAGTGTaGCGGTCAAAGCCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: IMIVGYNSSFNATMVVLSNTGEV*RSKPVL
Trigger: CAGCACAGGCTTTGACCGTCACACTTCTCCAGTGTT...AGAAAGCACGACCATCGTGGCATTGAAACTTGAGTTATAGCCTACTATCATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS-3UTR TCA 90 bp AGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCACATTCCCGAAATGCCTaGTATGTCACTGGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: SLLIEKDEILRGLRAKKSHSRNA*YVTGWL
Trigger: GAGCCAGCCAGTGACATATCAGGCATTTCGGGAATG...TGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317582.10
ENST00000611738.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGCAGGAGCCACCTTGCTGAATaGTGTACTCTGCCGAATAGT +
Preference number: 4 (lower is better)
Translates to: VHISKIPKGSIFTRWSCRSHLAE*CTLPNS
Trigger: ACTATTCGGCAGAGTACATCATTCAGCAAGGTGGCT...CCTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000618481.4
CDS-3UTR TCA 90 bp CTATCCCAATTCTTCCTAAGTAAACCCTCTCTCGCTAAAGCAGTGGGTCTCAATTGCTATCTTCTGCAGTaGTTCCAGGGTATTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LSQFFLSKPSLAKAVGLNCYLLQ*FQGIPP
Trigger: AGGAGGAATACCCTGGAATCACTGCAGAAGATAGCA...ATTGAGACCCACTGCTTTAGCGAGAGAGGGTTTACTTAGGAAGAATTGGGATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp TTCTCCACGTGCACAATGTCAGAATTAGAGGAGTTGTTCTCACTCTTCTCTCCATGCTATCTTCTGCAGTaGTTCCAGGGTATTCCTCCT +
Preference number: 4 (lower is better)
Translates to: FSTCTMSELEELFSLFSPCYLLQ*FQGIPP
Trigger: AGGAGGAATACCCTGGAATCACTGCAGAAGATAGCA...TGGAGAGAAGAGTGAGAACAACTCCTCTAATTCTGACATTGTGCACGTGGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp GCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTATGCCACTGCCATGTTaGGCAGAAGTCCCCAATTAT +
Preference number: 4 (lower is better)
Translates to: AGGSNSSQYNSNLTSFCLMPLPC*AEVPNY
Trigger: ATAATTGGGGACTTCTGCTCAACATGGCAGTGGCAT...AAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CTAAGCTTTTCACTTCTTCAGGATCCATTGCAATCTGCTGCCAGGACTCAGGGCGCTCATCGAGAAAGATaGAATTCTAAGGGGATTAAG +
Preference number: 4 (lower is better)
Translates to: LSFSLLQDPLQSAARTQGAHRER*NSKGIK
Trigger: CTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGC...GCCCTGAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGTGAAAAGCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp TCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGGCTCATCGAGAAAGATaGAATTCTAAGGGGATTAAG +
Preference number: 4 (lower is better)
Translates to: SDECECPTSSPNMPNMPLAHRER*NSKGIK
Trigger: CTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGC...CAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGGAGCTCATCGAGAAAGATaGAATTCTAAGGGGATTAAG +
Preference number: 4 (lower is better)
Translates to: PHPVNSGADQELPEKANGAHRER*NSKGIK
Trigger: CTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGC...TCCATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp ATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCAGTAGCTGAGCTCAGCCAATGGGTGTaGGGATCCAGAACTGGCAAG +
Preference number: 4 (lower is better)
Translates to: IEKDEILRGLRAKKSVAELSQWV*GSRTGK
Trigger: CTTGCCAGTTCTGGATCCTCACACCCATTGGCTGAG...CTCAGCTACTGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp ATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCAGTAGCTGAGGCTTCGATTGGTGCTTaGATGCGCTCAGCCAATGGG +
Preference number: 4 (lower is better)
Translates to: IEKDEILRGLRAKKSVAEASIGA*MRSANG
Trigger: CCCATTGGCTGAGCGCATTCAAGCACCAATCGAAGC...CTCAGCTACTGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GTGAACCAGAAGGTCAACAGTTGCATTTCTTCATCTAGAATGTTCTCTAGAAGGTCAGCAGCTCAGAGATaGACCTGGCTTCGATTGGTG +
Preference number: 4 (lower is better)
Translates to: VNQKVNSCISSSRMFSRRSAAQR*TWLRLV
Trigger: CACCAATCGAAGCCAGGTTCATCTCTGAGCTGCTGA...CCTTCTAGAGAACATTCTAGATGAAGAAATGCAACTGTTGACCTTCTGGTTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp TGGGTGAACCAGAAGGTCAACAGTTGCATTTCTTCATCTAGAATGTTCTCTAGATCAGCAGCTCAGAGATaGACCTGGCTTCGATTGGTG +
Preference number: 4 (lower is better)
Translates to: WVNQKVNSCISSSRMFSRSAAQR*TWLRLV
Trigger: CACCAATCGAAGCCAGGTTCATCTCTGAGCTGCTGA...TCTAGAGAACATTCTAGATGAAGAAATGCAACTGTTGACCTTCTGGTTCACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CTCTTCTCTCCAGCTCCGTTGCTGTCTAAGCTTTTCACTTCTTCAGGATCCATTACAGAGCAGTTGAGATaGGGTCTAAGGACTAACAAG +
Preference number: 4 (lower is better)
Translates to: LFSPAPLLSKLFTSSGSITEQLR*GLRTNK
Trigger: CTTGTTAGTCCTTAGACCTCATCTCAACTGCTCTGT...AATGGATCCTGAAGAAGTGAAAAGCTTAGACAGCAACGGAGCTGGAGAGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp CTAAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACACACAAACACCGCAGGTACTGACTaGTTTCTGTGGGCCCAGAAT +
Preference number: 4 (lower is better)
Translates to: LKHRTKTRYRIKLERHTNTAGTD*FLWAQN
Trigger: ATTCTGGGCCCACAGAAATCAGTCAGTACCTGCGGT...GTTTGTGTGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp TGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTCAAAGCCTGAGGAAATaGACAGTAGCTGTGGGTCAA +
Preference number: 4 (lower is better)
Translates to: CWRFKFQPIQLQPYILLSQSLRK*TVAVGQ
Trigger: TTGACCCACAGCTACTGTTCATTTCCTCAGGCTTTG...AGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CTTTCTGTGTGCCAACTCTGGCTAGCTGACAGTGACACAGGTAAGCTCTCAGACTATCCAGTATGTCGCTaGGATGTTAAACGAGATAAT +
Preference number: 4 (lower is better)
Translates to: LSVCQLWLADSDTGKLSDYPVCR*DVKRDN
Trigger: ATTATCTCGTTTAACATCTCAGCGACATACTGGATA...GTCTGAGAGCTTACCTGTGTCACTGTCAGCTAGCCAGAGTTGGCACACAGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337612.9
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp ATCATGATAGTAGGCTATAACTCAAGTTTCAATGCCACGATGGTCGTGCTTTCTACCCAGCCACCTTGCTaGATGATGTACTCTGCCGAA +
Preference number: 4 (lower is better)
Translates to: IMIVGYNSSFNATMVVLSTQPPC*MMYSAE
Trigger: TTCGGCAGAGTACATCATTCAGCAAGGTGGCTGGGT...AGAAAGCACGACCATCGTGGCATTGAAACTTGAGTTATAGCCTACTATCATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS-3UTR GCA 90 bp GTGAACCAGAAGGTCAACAGTTGCATTTCTTCATCTAGAATGTTCTCTAGAAGGGCCAAACTGCAGCAGTaGGCTCAAAGGTTCTTGACC +
Preference number: 4 (lower is better)
Translates to: VNQKVNSCISSSRMFSRRAKLQQ*AQRFLT
Trigger: GGTCAAGAACCTTTGAGCGCACTGCTGCAGTTTGGC...CCTTCTAGAGAACATTCTAGATGAAGAAATGCAACTGTTGACCTTCTGGTTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000618481.4
CDS-3UTR GCA 90 bp ATCATGATAGTAGGCTATAACTCAAGTTTCAATGCCACGATGGTCGTGCTTTCTGCCAAACTGCAGCAGTaGGCTCAAAGGTTCTTGACC +
Preference number: 4 (lower is better)
Translates to: IMIVGYNSSFNATMVVLSAKLQQ*AQRFLT
Trigger: GGTCAAGAACCTTTGAGCGCACTGCTGCAGTTTGGC...AGAAAGCACGACCATCGTGGCATTGAAACTTGAGTTATAGCCTACTATCATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS-3UTR GCA 90 bp AGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCAGCCAAACTGCAGCAGTaGGCTCAAAGGTTCTTGACC +
Preference number: 4 (lower is better)
Translates to: SLLIEKDEILRGLRAKKSAKLQQ*AQRFLT
Trigger: GGTCAAGAACCTTTGAGCGCACTGCTGCAGTTTGGC...TGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000618481.4
CDS-3UTR GCA 90 bp TGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTTCTATGTCACGCCAAACTaGAGCAGTGCGCTCAAAGGT +
Preference number: 4 (lower is better)
Translates to: WRFKFQPIQLQPYILLSFYVTPN*SSALKG
Trigger: ACCTTTGAGCGCACTGCTGCAGTTTGGCGTGACATA...GAAAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000618481.4
CDS-3UTR GCA 90 bp AGGAGTTGTTCTCACTCTTCTCTCCAGCTCCGTTGCTGTCTAAGCTTTTCACTTCTGAATGATGTACTCTaGCGAATAGTCCTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: RSCSHSSLQLRCCLSFSLLNDVL*RIVLQV
Trigger: TACCTGGAGGACTATTCGGCAGAGTACATCATTCAG...AAGTGAAAAGCTTAGACAGCAACGGAGCTGGAGAGAAGAGTGAGAACAACTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
CDS-3UTR GCA 90 bp TCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCGTCATTGCTATCTTCTaGAGTGATTCCAGGGTATTC +
Preference number: 4 (lower is better)
Translates to: STNVQTAAGGSNSSQYNSVIAIF*SDSRVF
Trigger: GAATACCCTGGAATCACTGCAGAAGATAGCAATGAC...GGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACACACAAACATGGCAGGCTTTCTGTGTaGCAACTCTGGCTAGCTGAC +
Preference number: 4 (lower is better)
Translates to: KTQNKDTLQDKAGKTHKHGRLSV*QLWLAD
Trigger: GTCAGCTAGCCAGAGTTGGCACACAGAAAGCCTGCC...ATGTTTGTGTGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TTTCTCTGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGGGATCCATTGCAATCTaGTGCCAGGACTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: FLCVHISKIPKGSIFTRWGSIAI*CQDSGP
Trigger: AGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCC...CCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACAGAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTTCTCTCCAGCTCCGTTaGTGTCTAAGCTTTTCACTT +
Preference number: 4 (lower is better)
Translates to: AAGGSNSSQYNSNLTSFCSLQLR*CLSFSL
Trigger: AAGTGAAAAGCTTAGACAGCAACGGAGCTGGAGAGA...ACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCATCTTCTTTCTCCACGTaGACAATGTCAGAATTAGAG +
Preference number: 4 (lower is better)
Translates to: SPIIPECSTNVQTAAGGSSSFST*TMSELE
Trigger: CTCTAATTCTGACATTGTGCACGTGGAGAAAGAAGA...TGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp ATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATTCTTCTTTCTCCACGTaGACAATGTCAGAATTAGAG +
Preference number: 4 (lower is better)
Translates to: MNVNAPPQALTCLTCHCHSSFST*TMSELE
Trigger: CTCTAATTCTGACATTGTGCACGTGGAGAAAGAAGA...ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGTCTTCTTTCTCCACGTaGACAATGTCAGAATTAGAG +
Preference number: 4 (lower is better)
Translates to: SDECECPTSSPNMPNMPLSSFST*TMSELE
Trigger: CTCTAATTCTGACATTGTGCACGTGGAGAAAGAAGA...CAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGGATCTTCTTTCTCCACGTaGACAATGTCAGAATTAGAG +
Preference number: 4 (lower is better)
Translates to: PHPVNSGADQELPEKANGSSFST*TMSELE
Trigger: CTCTAATTCTGACATTGTGCACGTGGAGAAAGAAGA...TCCATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AGAAGTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGTCTTCTTTCTCCACGTaGACAATGTCAGAATTAGAG +
Preference number: 4 (lower is better)
Translates to: RSPQLSQSVPQMSRQLLESSFST*TMSELE
Trigger: CTCTAATTCTGACATTGTGCACGTGGAGAAAGAAGA...CTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGACTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CAATGTCTAGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATTCTTCTTTCTCCACGTaGACAATGTCAGAATTAGAG +
Preference number: 4 (lower is better)
Translates to: QCLETFSFVISGRGCHWHSSFST*TMSELE
Trigger: CTCTAATTCTGACATTGTGCACGTGGAGAAAGAAGA...ATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCTAGACATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTAAGGCTCTCTTCCCTTaGGTTTATCTCCTTCTCACT +
Preference number: 4 (lower is better)
Translates to: KCPDSCWRFKFQPIQLQPKALFP*VYLLLT
Trigger: AGTGAGAAGGAGATAAACGCAAGGGAAGAGAGCCTT...AGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTCTAACATGCCTAACATaGCACTGCCATGTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: CWRFKFQPIQLQPYILLSLTCLT*HCHVEQ
Trigger: CTGCTCAACATGGCAGTGGCATGTTAGGCATGTTAG...AGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CTATCCCAATTCTTCCTAAGTAAACCCTCTCTCGCTAAAGCAGTGGGTCTCAATCTAACATGCCTAACATaGCACTGCCATGTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: LSQFFLSKPSLAKAVGLNLTCLT*HCHVEQ
Trigger: CTGCTCAACATGGCAGTGGCATGTTAGGCATGTTAG...ATTGAGACCCACTGCTTTAGCGAGAGAGGGTTTACTTAGGAAGAATTGGGATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGCAGCCTCAAGCCCTAACATaGCTAACATGCCACTGCCAT +
Preference number: 4 (lower is better)
Translates to: CTYFEDSQRQHFYKVELQPQALT*LTCHCH
Trigger: ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGG...CTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GATTCTCAATTTAGCATGAGCGGAGGCCCTTGGGATTTACAGTCAGATGAATGTTCAGATGAATGTGAATaGCCCACCTCAAGCCCTAAC +
Preference number: 4 (lower is better)
Translates to: DSQFSMSGGPWDLQSDECSDECE*PTSSPN
Trigger: GTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGA...ACATTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTAGTGGGTGCAGAGCCTaGTCATCGAGAAAGATGAAA +
Preference number: 4 (lower is better)
Translates to: AGGSNSSQYNSNLTSFCLSGCRA*SSRKMK
Trigger: TTTCATCTTTCTCGATGAGCAGGCTCTGCACCCACT...AAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CTAACAGGTGGGAAAATAAAGCAGCAAGTAGCCGCTTCCATACCACATTTCTTCAGTGGGTGCAGAGCCTaGTCATCGAGAAAGATGAAA +
Preference number: 4 (lower is better)
Translates to: LTGGKIKQQVAASIPHFFSGCRA*SSRKMK
Trigger: TTTCATCTTTCTCGATGAGCAGGCTCTGCACCCACT...GAAGAAATGTGGTATGGAAGCGGCTACTTGCTGCTTTATTTTCCCACCTGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp ACTTCTTCAGGATCCATTGCAATCTGCTGCCAGGACTCAGGGCCTAGTGACACTGAGGAAAGAAAATTATaGCGATGCTCAACTAGCATA +
Preference number: 4 (lower is better)
Translates to: TSSGSIAICCQDSGPSDTEERKL*RCSTSI
Trigger: TATGCTAGTTGAGCATCGGCATAATTTTCTTTCCTC...AGTGTCACTAGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp TGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTGAAGAACAGGGATGCTaGCACATCCTGTTAACTCAG +
Preference number: 4 (lower is better)
Translates to: CWRFKFQPIQLQPYILLSEEQGC*HILLTQ
Trigger: CTGAGTTAACAGGATGTGGCAGCATCCCTGTTCTTC...AGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CTCCAGCTCCGTTGCTGTCTAAGCTTTTCACTTCTTCAGGATCCATTGCAATCTAAGGAAGAACAGGGATaGTGCCACATCCTGTTAACT +
Preference number: 4 (lower is better)
Translates to: LQLRCCLSFSLLQDPLQSKEEQG*CHILLT
Trigger: AGTTAACAGGATGTGGCAGCATCCCTGTTCTTCCTT...AGATTGCAATGGATCCTGAAGAAGTGAAAAGCTTAGACAGCAACGGAGCTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp TGGGACACTAAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACAGCAAAAAGCAGGAGCTaGAGTAGGAAGCAGTCCTCA +
Preference number: 4 (lower is better)
Translates to: WDTKTQNKDTLQDKAGKTAKSRS*SRKQSS
Trigger: TGAGGACTGCTTCCTACTGCAGCTCCTGCTTTTTGC...TGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTTAGTGTCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp ATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATGGCAAGGAGACTACTTaGCTTACTGTCATATTATTG +
Preference number: 4 (lower is better)
Translates to: MNVNAPPQALTCLTCHCHGKETT*LTVILL
Trigger: CAATAATATGACAGTAAGGCAAGTAGTCTCCTTGCC...ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CTAAGCTTTTCACTTCTTCAGGATCCATTGCAATCTGCTGCCAGGACTCAGGGCGGCAAGGAGACTACTTaGCTTACTGTCATATTATTG +
Preference number: 4 (lower is better)
Translates to: LSFSLLQDPLQSAARTQGGKETT*LTVILL
Trigger: CAATAATATGACAGTAAGGCAAGTAGTCTCCTTGCC...GCCCTGAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGTGAAAAGCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp AGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACGGCAAGGAGACTACTTaGCTTACTGTCATATTATTG +
Preference number: 4 (lower is better)
Translates to: SQMNVNAPPQALTCLTCHGKETT*LTVILL
Trigger: CAATAATATGACAGTAAGGCAAGTAGTCTCCTTGCC...GTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTTGTACATTCCCGAAATaGCTGATATGTCACTGGCCT +
Preference number: 4 (lower is better)
Translates to: AAGGSNSSQYNSNLTSFCCTFPK*LICHWP
Trigger: AGGCCAGTGACATATCAGGCATTTCGGGAATGTACA...ACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498133.5
ENST00000543133.5
CDS-3UTR CCA 90 bp ATCATGATAGTAGGCTATAACTCAAGTTTCAATGCCACGATGGTCGTGCTTTCTGGCAGGGCTGAACACTaGAGAAGTGTGACGGTCAAA +
Preference number: 4 (lower is better)
Translates to: IMIVGYNSSFNATMVVLSGRAEH*RSVTVK
Trigger: TTTGACCGTCACACTTCTCCAGTGTTCAGCCCTGCC...AGAAAGCACGACCATCGTGGCATTGAAACTTGAGTTATAGCCTACTATCATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS-3UTR CCA 90 bp TCTGTTAGCAATCAGATAGCCTACAAGGCCGTCTTGATGGGTATGATCACCACCACTTTTTCTCCAAGATaGGCCAAGCAGTCTTCCATT +
Preference number: 4 (lower is better)
Translates to: SVSNQIAYKAVLMGMITTTFSPR*AKQSSI
Trigger: AATGGAAGACTGCTTGGCCCATCTTGGAGAAAAAGT...GGTGGTGATCATACCCATCAAGACGGCCTTGTAGGCTATCTGATTGCTAACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317582.10
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACGGCTCTTTCAGTTCCTaGGACACTTTTTCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: DLQSDECECPTSSPNMPNGSFSS*DTFSPR
Trigger: TCTTGGAGAAAAAGTGTCCCAGGAACTGAAAGAGCC...GTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR CCA 90 bp ATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATATTTGCAATGCTTTATaGAGAGGCTCTTTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: MNVNAPPQALTCLTCHCHICNAL*RGSFSS
Trigger: GGAACTGAAAGAGCCTCTCCATAAAGCATTGCAAAT...ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACATTTGCAATGCTTTATaGAGAGGCTCTTTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: SQMNVNAPPQALTCLTCHICNAL*RGSFSS
Trigger: GGAACTGAAAGAGCCTCTCCATAAAGCATTGCAAAT...GTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GTGCAGAGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGGTCCAGAGTTGTCGCTaGGCAGGATGTAAATGTCAT +
Preference number: 4 (lower is better)
Translates to: VQSLLIEKDEILRGLRAKVQSCR*AGCKCH
Trigger: ATGACATTTACATCCTGCCCAGCGACAACTCTGGAC...CTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCTCTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp TTTCTCTGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGGGAAGTGGTCACAGTTaGAGACTCTGGGGGACTGAC +
Preference number: 4 (lower is better)
Translates to: FLCVHISKIPKGSIFTRWGSGHS*RLWGTD
Trigger: GTCAGTCCCCCAGAGTCTCCAACTGTGACCACTTCC...CCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACAGAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp TGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGCAGTCTGTGTGCCAACTCTaGCTAGCTGACAGTGACACA +
Preference number: 4 (lower is better)
Translates to: CTYFEDSQRQHFYKVELQSVCQL*LADSDT
Trigger: TGTGTCACTGTCAGCTAGCCAGAGTTGGCACACAGA...CTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp TGGGACACTAAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACATGTCCAGACAGCTGCTaGAGGTTCAAATTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: WDTKTQNKDTLQDKAGKTCPDSC*RFKFQP
Trigger: TGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACA...TGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTTAGTGTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTATGAGCGGAGGCCCTTaGGATTTACAGTCAGATGAA +
Preference number: 4 (lower is better)
Translates to: AGGSNSSQYNSNLTSFCLMSGGP*DLQSDE
Trigger: TTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCAT...AAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CTAACAGGTGGGAAAATAAAGCAGCAAGTAGCCGCTTCCATACCACATTTCTTCATGAGCGGAGGCCCTTaGGATTTACAGTCAGATGAA +
Preference number: 4 (lower is better)
Translates to: LTGGKIKQQVAASIPHFFMSGGP*DLQSDE
Trigger: TTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCAT...GAAGAAATGTGGTATGGAAGCGGCTACTTGCTGCTTTATTTTCCCACCTGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp TGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGCTAAGTTCTCTCAGCTaGGAATTTCTATCCCAATTC +
Preference number: 4 (lower is better)
Translates to: CHILLTQELTKSYQRKPMLSSLS*EFLSQF
Trigger: GAATTGGGATAGAAATTCCCAGCTGAGAGAACTTAG...CATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp ATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATCTAAGTTCTCTCAGCTaGGAATTTCTATCCCAATTC +
Preference number: 4 (lower is better)
Translates to: MNVNAPPQALTCLTCHCHLSSLS*EFLSQF
Trigger: GAATTGGGATAGAAATTCCCAGCTGAGAGAACTTAG...ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp TCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCTAAGTTCTCTCAGCTaGGAATTTCTATCCCAATTC +
Preference number: 4 (lower is better)
Translates to: SDECECPTSSPNMPNMPLLSSLS*EFLSQF
Trigger: GAATTGGGATAGAAATTCCCAGCTGAGAGAACTTAG...CAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp TCCACAAGGCTCTCTTCCCTTGCGTTTATCTCCTTCTCACTCAGCAGCGTTTCTGGAATGTCTAACAGGTaGGAAAATAAAGCAGCAAGT +
Preference number: 4 (lower is better)
Translates to: STRLSSLAFISFSLSSVSGMSNR*ENKAAS
Trigger: ACTTGCTGCTTTATTTTCCCACCTGTTAGACATTCC...AGAAACGCTGCTGAGTGAGAAGGAGATAAACGCAAGGGAAGAGAGCCTTGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp TGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGGGAATGTCTAACAGGTaGGAAAATAAAGCAGCAAGT +
Preference number: 4 (lower is better)
Translates to: CHILLTQELTKSYQRKPMGMSNR*ENKAAS
Trigger: ACTTGCTGCTTTATTTTCCCACCTGTTAGACATTCC...CATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCATGGAGGTGGAAGGAATaGCCTCCTACTATCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SLLIEKDEILRGLRAKKSWRWKE*PPTISS
Trigger: GGAGCTGATAGTAGGAGGCCATTCCTTCCACCTCCA...TGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GATTCTCAATTTAGCATGAGCGGAGGCCCTTGGGATTTACAGTCAGATGAATGTGGTATAAGTTGGAGGTaGAAGGAATGGCCTCCTACT +
Preference number: 4 (lower is better)
Translates to: DSQFSMSGGPWDLQSDECGISWR*KEWPPT
Trigger: AGTAGGAGGCCATTCCTTCCACCTCCAACTTATACC...ACATTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTTAGAGGGTATAAGTTaGAGGTGGAAGGAATGGCCT +
Preference number: 4 (lower is better)
Translates to: RQLLEVQIPANTTPTLHPLEGIS*RWKEWP
Trigger: AGGCCATTCCTTCCACCTCCAACTTATACCCTCTAA...AGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp TGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTTCTGCATCTGGTATCCCTaGGACAGAAATGCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: WRFKFQPIQLQPYILLSFCIWYP*DRNAGE
Trigger: CTCACCTGCATTTCTGTCCCAGGGATACCAGATGCA...GAAAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp TGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTTCGGTAGTGGCTGCATCTaGTATCCCTGGGACAGAAAT +
Preference number: 4 (lower is better)
Translates to: WRFKFQPIQLQPYILLSFGSGCI*YPWDRN
Trigger: ATTTCTGTCCCAGGGATACCAGATGCAGCCACTACC...GAAAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp TGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGCAGGCTTGTGTGGGAATTTaGGCAGAAGCTCTAGGTCGT +
Preference number: 4 (lower is better)
Translates to: CTYFEDSQRQHFYKVELQACVGI*AEALGR
Trigger: ACGACCTAGAGCTTCTGCCCAAATTCCCACACAAGC...CTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR CAA 72 bp GAATCTTTCCTTCACCTTAGACTTAGAGGGTATAAGTaGGAGGTGGAAGGAATGGCCTCCTACTATCAGCTC +
Preference number: 4 (lower is better)
Translates to: ESFLHLRLRGYK*EVEGMASYYQL
Trigger: GAGCTGATAGTAGGAGGCCATTCCTTCCACCTCCAACTTATACCCTCTAAGTCTAAGGTGAAGGAAAGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR CAA 72 bp ACTGCAGCAGTGCGCTCAAAGGTTCTTGACCACGTCTaGTCAATTCCAAAAGCATTTGTCGTAGCAAAACCA +
Preference number: 4 (lower is better)
Translates to: TAAVRSKVLDHV*SIPKAFVVAKP
Trigger: TGGTTTTGCTACGACAAATGCTTTTGGAATTGACAAGACGTGGTCAAGAACCTTTGAGCGCACTGCTGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498133.5
CDS-3UTR TCA 90 bp TGGGTGAACCAGAAGGTCAACAGTTGCATTTCTTCATCTAGAATGTTCTCTAGAGCGCTCAAAGGTTCTTaGCCACGTCTTGTCAATTCC +
Preference number: 4 (lower is better)
Translates to: WVNQKVNSCISSSRMFSRALKGS*PRLVNS
Trigger: GGAATTGACAAGACGTGGTCAAGAACCTTTGAGCGC...TCTAGAGAACATTCTAGATGAAGAAATGCAACTGTTGACCTTCTGGTTCACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000618481.4
CDS-3UTR TCA 90 bp TGGGACACTAAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACAAGCCACCTTGCTGAATaGTGTACTCTGCCGAATAGT +
Preference number: 4 (lower is better)
Translates to: WDTKTQNKDTLQDKAGKTSHLAE*CTLPNS
Trigger: ACTATTCGGCAGAGTACATCATTCAGCAAGGTGGCT...TGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTTAGTGTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000618481.4
CDS-3UTR TCA 90 bp GCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTGTATTCCTCCTCCTCTaGCTCAAGACTAAACACAGT +
Preference number: 4 (lower is better)
Translates to: AGGSNSSQYNSNLTSFCLVFLLL*LKTKHS
Trigger: ACTGTGTTTAGTCTTGAGTCAGAGGAGGAGGAATAC...AAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGCAGGGTATTCCTCCTCCTCTaGCTCAAGACTAAACACAGT +
Preference number: 4 (lower is better)
Translates to: VHISKIPKGSIFTRWSCRVFLLL*LKTKHS
Trigger: ACTGTGTTTAGTCTTGAGTCAGAGGAGGAGGAATAC...CCTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GTGCAGAGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGGTATTCCTCCTCCTCTaGCTCAAGACTAAACACAGT +
Preference number: 4 (lower is better)
Translates to: VQSLLIEKDEILRGLRAKVFLLL*LKTKHS
Trigger: ACTGTGTTTAGTCTTGAGTCAGAGGAGGAGGAATAC...CTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCTCTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp TGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTGTATTCCTCCTCCTCTaGCTCAAGACTAAACACAGT +
Preference number: 4 (lower is better)
Translates to: CWRFKFQPIQLQPYILLSVFLLL*LKTKHS
Trigger: ACTGTGTTTAGTCTTGAGTCAGAGGAGGAGGAATAC...AGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GTGGAGGAATGTCTAACAGGTGGGAAAATAAAGCAGCAAGTAGCCGCTTCCATATGGATTTCTCAACTGTaGTCACTTCTGTGTCAGGTT +
Preference number: 4 (lower is better)
Translates to: VEECLTGGKIKQQVAASIWISQL*SLLCQV
Trigger: AACCTGACACAGAAGTGATCACAGTTGAGAAATCCA...TATGGAAGCGGCTACTTGCTGCTTTATTTTCCCACCTGTTAGACATTCCTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp TGCTGTCTAAGCTTTTCACTTCTTCAGGATCCATTGCAATCTGCTGCCAGGACTTGGATTTCTCAACTGTaGTCACTTCTGTGTCAGGTT +
Preference number: 4 (lower is better)
Translates to: CCLSFSLLQDPLQSAARTWISQL*SLLCQV
Trigger: AACCTGACACAGAAGTGATCACAGTTGAGAAATCCA...AGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGTGAAAAGCTTAGACAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp CTCTTCTCTCCAGCTCCGTTGCTGTCTAAGCTTTTCACTTCTTCAGGATCCATTTGGATTTCTCAACTGTaGTCACTTCTGTGTCAGGTT +
Preference number: 4 (lower is better)
Translates to: LFSPAPLLSKLFTSSGSIWISQL*SLLCQV
Trigger: AACCTGACACAGAAGTGATCACAGTTGAGAAATCCA...AATGGATCCTGAAGAAGTGAAAAGCTTAGACAGCAACGGAGCTGGAGAGAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp GATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACTGGATTTCTCAACTGTaGTCACTTCTGTGTCAGGTT +
Preference number: 4 (lower is better)
Translates to: DLQSDECECPTSSPNMPNWISQL*SLLCQV
Trigger: AACCTGACACAGAAGTGATCACAGTTGAGAAATCCA...GTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp TGGGACACTAAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACAATGCCACTGCCATGTTaGGCAGAAGTCCCCAATTAT +
Preference number: 4 (lower is better)
Translates to: WDTKTQNKDTLQDKAGKTMPLPC*AEVPNY
Trigger: ATAATTGGGGACTTCTGCTCAACATGGCAGTGGCAT...TGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTTAGTGTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp TGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGCAGATTCTCAATTTAGCATaGGCGGAGGCCCTTGGGATT +
Preference number: 4 (lower is better)
Translates to: CTYFEDSQRQHFYKVELQILNLA*AEALGI
Trigger: AATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAAT...CTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACACACAAACATTCAGCAGCTCAGAGATaGACCTGGCTTCGATTGGTG +
Preference number: 4 (lower is better)
Translates to: KTQNKDTLQDKAGKTHKHSAAQR*TWLRLV
Trigger: CACCAATCGAAGCCAGGTTCATCTCTGAGCTGCTGA...ATGTTTGTGTGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CTCCAGCTCCGTTGCTGTCTAAGCTTTTCACTTCTTCAGGATCCATTGCAATCTCTAGTTCCATTACCGTaGAATACAACTGGCCAAATC +
Preference number: 4 (lower is better)
Translates to: LQLRCCLSFSLLQDPLQSLVPLP*NTTGQI
Trigger: GATTTGGCCAGTTGTATTTCACGGTAATGGAACTAG...AGATTGCAATGGATCCTGAAGAAGTGAAAAGCTTAGACAGCAACGGAGCTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp AGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTCTAGTTCCATTACCGTaGAATACAACTGGCCAAATC +
Preference number: 4 (lower is better)
Translates to: RQLLEVQIPANTTPTLHPLVPLP*NTTGQI
Trigger: GATTTGGCCAGTTGTATTTCACGGTAATGGAACTAG...AGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACCTAGTTCCATTACCGTaGAATACAACTGGCCAAATC +
Preference number: 4 (lower is better)
Translates to: DLQSDECECPTSSPNMPNLVPLP*NTTGQI
Trigger: GATTTGGCCAGTTGTATTTCACGGTAATGGAACTAG...GTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GATTCTCAATTTAGCATGAGCGGAGGCCCTTGGGATTTACAGTCAGATGAATGTACAGAGCAGTTGAGATaGGGTCTAAGGACTAACAAG +
Preference number: 4 (lower is better)
Translates to: DSQFSMSGGPWDLQSDECTEQLR*GLRTNK
Trigger: CTTGTTAGTCCTTAGACCTCATCTCAACTGCTCTGT...ACATTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GTGGAGGAATGTCTAACAGGTGGGAAAATAAAGCAGCAAGTAGCCGCTTCCATATTACTGTCATATTATTaGGGGAATCAGCGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: VEECLTGGKIKQQVAASILLSYY*GNQRKA
Trigger: GGCTTTGCGCTGATTCCCTCAATAATATGACAGTAA...TATGGAAGCGGCTACTTGCTGCTTTATTTTCCCACCTGTTAGACATTCCTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp TGCTGTCTAAGCTTTTCACTTCTTCAGGATCCATTGCAATCTGCTGCCAGGACTTTACTGTCATATTATTaGGGGAATCAGCGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: CCLSFSLLQDPLQSAARTLLSYY*GNQRKA
Trigger: GGCTTTGCGCTGATTCCCTCAATAATATGACAGTAA...AGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGTGAAAAGCTTAGACAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp ATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATTATCCAGTATGTCGCTaGGATGTTAAACGAGATAAT +
Preference number: 4 (lower is better)
Translates to: MNVNAPPQALTCLTCHCHYPVCR*DVKRDN
Trigger: ATTATCTCGTTTAACATCTCAGCGACATACTGGATA...ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCAGGAGCATTTGCAATaGTTTATGGAGAGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: VPQMSRQLLEVQIPANTTQEHLQ*FMERLF
Trigger: AAAGAGCCTCTCCATAAAGCATTGCAAATGCTCCTG...AGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CTCTGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGGCTCAGGAGCATTTaGAATGCTTTATGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: LCVHISKIPKGSIFTRWSWLRSI*NALWRG
Trigger: GCCTCTCCATAAAGCATTGCAAATGCTCCTGAGCCA...GCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTCTGAATGATGTACTCTaGCGAATAGTCCTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: AGGSNSSQYNSNLTSFCLLNDVL*RIVLQV
Trigger: TACCTGGAGGACTATTCGGCAGAGTACATCATTCAG...AAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000618481.4
CDS-3UTR GCA 90 bp GATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACGTCATTGCTATCTTCTaGAGTGATTCCAGGGTATTC +
Preference number: 4 (lower is better)
Translates to: DLQSDECECPTSSPNMPNVIAIF*SDSRVF
Trigger: GAATACCCTGGAATCACTGCAGAAGATAGCAATGAC...GTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GATTCTCAATTTAGCATGAGCGGAGGCCCTTGGGATTTACAGTCAGATGAATGTTCTCTCCAGCTCCGTTaGTGTCTAAGCTTTTCACTT +
Preference number: 4 (lower is better)
Translates to: DSQFSMSGGPWDLQSDECSLQLR*CLSFSL
Trigger: AAGTGAAAAGCTTAGACAGCAACGGAGCTGGAGAGA...ACATTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GAATTAGAGGAGTTGTTCTCACTCTTCTCTCCAGCTCCGTTGCTGTCTAAGCTTAGGTTCAGTTGTTGCTaGTTTCACCTCTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: ELEELFSLFSPAPLLSKLRFSCC*FHLFFI
Trigger: GATGAAGAAGAGGTGAAAGCAGCAACAACTGAACCT...AAGCTTAGACAGCAACGGAGCTGGAGAGAAGAGTGAGAACAACTCCTCTAATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp GTGGAGGAATGTCTAACAGGTGGGAAAATAAAGCAGCAAGTAGCCGCTTCCATAAGGTTCAGTTGTTGCTaGTTTCACCTCTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: VEECLTGGKIKQQVAASIRFSCC*FHLFFI
Trigger: GATGAAGAAGAGGTGAAAGCAGCAACAACTGAACCT...TATGGAAGCGGCTACTTGCTGCTTTATTTTCCCACCTGTTAGACATTCCTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGCAGCTAACATGCCTAACATaGCACTGCCATGTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: CTYFEDSQRQHFYKVELQLTCLT*HCHVEQ
Trigger: CTGCTCAACATGGCAGTGGCATGTTAGGCATGTTAG...CTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CTAAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACACACAAACCCTCAAGCCCTAACATaGCTAACATGCCACTGCCAT +
Preference number: 4 (lower is better)
Translates to: LKHRTKTRYRIKLERHTNPQALT*LTCHCH
Trigger: ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGG...GTTTGTGTGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTTCCTAGCCAGAGTTACTTaGAGTTGCACTCACAAGTGG +
Preference number: 4 (lower is better)
Translates to: WRFKFQPIQLQPYILLSFLARVT*SCTHKW
Trigger: CCACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAG...GAAAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGGAGGAAAGAAAATTATaGCGATGCTCAACTAGCATA +
Preference number: 4 (lower is better)
Translates to: SDECECPTSSPNMPNMPLEERKL*RCSTSI
Trigger: TATGCTAGTTGAGCATCGGCATAATTTTCTTTCCTC...CAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AGGAGTTGTTCTCACTCTTCTCTCCAGCTCCGTTGCTGTCTAAGCTTTTCACTTGATAACGCACCAGTTTaGTCTTCACCTATGCAAACA +
Preference number: 4 (lower is better)
Translates to: RSCSHSSLQLRCCLSFSLDNAPV*SSPMQT
Trigger: TGTTTGCATAGGTGAAGAGCAAACTGGTGCGTTATC...AAGTGAAAAGCTTAGACAGCAACGGAGCTGGAGAGAAGAGTGAGAACAACTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp ATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCAGTAGCTGAGCGATTGGTGCTTGAATaGGCTCAGCCAATGGGTGTG +
Preference number: 4 (lower is better)
Translates to: IEKDEILRGLRAKKSVAERLVLE*AQPMGV
Trigger: CACACCCATTGGCTGAGCGCATTCAAGCACCAATCG...CTCAGCTACTGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TGGGACACTAAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACAGAAGAACAGGGATGCTaGCACATCCTGTTAACTCAG +
Preference number: 4 (lower is better)
Translates to: WDTKTQNKDTLQDKAGKTEEQGC*HILLTQ
Trigger: CTGAGTTAACAGGATGTGGCAGCATCCCTGTTCTTC...TGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTTAGTGTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTAAGGAAGAACAGGGATaGTGCCACATCCTGTTAACT +
Preference number: 4 (lower is better)
Translates to: AGGSNSSQYNSNLTSFCLKEEQG*CHILLT
Trigger: AGTTAACAGGATGTGGCAGCATCCCTGTTCTTCCTT...AAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TTTCTCTGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAAGGGGTATCAAGAATaGCTCGAGGGGGAGATGGGT +
Preference number: 4 (lower is better)
Translates to: FLCVHISKIPKGSIFTRWKGYQE*LEGEMG
Trigger: ACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTT...CCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACAGAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTGGCTCTTTCAGTTCCTaGGACACTTTTTCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: AGGSNSSQYNSNLTSFCLGSFSS*DTFSPR
Trigger: TCTTGGAGAAAAAGTGTCCCAGGAACTGAAAGAGCC...AAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR CCA 90 bp TTTCTCTGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGCACAGTTGGAGACTCTaGGGGACTGACTTGTCCAGA +
Preference number: 4 (lower is better)
Translates to: FLCVHISKIPKGSIFTRWHSWRL*GTDLSR
Trigger: TCTGGACAAGTCAGTCCCCCAGAGTCTCCAACTGTG...CCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACAGAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACACACAAACATCAGACTGCCAGGAAGTaGTCACAGTTGGAGACTCTG +
Preference number: 4 (lower is better)
Translates to: KTQNKDTLQDKAGKTHKHQTARK*SQLETL
Trigger: CAGAGTCTCCAACTGTGACCACTTCCTGGCAGTCTG...ATGTTTGTGTGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp TTTCTCTGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGCAGACTGCCAGGAAGTaGTCACAGTTGGAGACTCTG +
Preference number: 4 (lower is better)
Translates to: FLCVHISKIPKGSIFTRWQTARK*SQLETL
Trigger: CAGAGTCTCCAACTGTGACCACTTCCTGGCAGTCTG...CCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACAGAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CTAAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACACACAAACTGTCCAGACAGCTGCTaGAGGTTCAAATTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: LKHRTKTRYRIKLERHTNCPDSC*RFKFQP
Trigger: TGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACA...GTTTGTGTGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTGTGAGGATCCAGAACTaGCAAGTGTTAATACTGGAA +
Preference number: 4 (lower is better)
Translates to: VPQMSRQLLEVQIPANTTVRIQN*QVLILE
Trigger: TTCCAGTATTAACACTTGCCAGTTCTGGATCCTCAC...AGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GTGGAGGAATGTCTAACAGGTGGGAAAATAAAGCAGCAAGTAGCCGCTTCCATATATTCTTTCCTTTCGTaGGCAACACAGGCTCCAATT +
Preference number: 4 (lower is better)
Translates to: VEECLTGGKIKQQVAASIYSFLS*ATQAPI
Trigger: AATTGGAGCCTGTGTTGCCCACGAAAGGAAAGAATA...TATGGAAGCGGCTACTTGCTGCTTTATTTTCCCACCTGTTAGACATTCCTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATGGAATGTCTAACAGGTaGGAAAATAAAGCAGCAAGT +
Preference number: 4 (lower is better)
Translates to: QSVPQMSRQLLEVQIPANGMSNR*ENKAAS
Trigger: ACTTGCTGCTTTATTTTCCCACCTGTTAGACATTCC...ATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp TGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTACCGTGAAATACAACTaGCCAAATCACTGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: CWRFKFQPIQLQPYILLSTVKYN*PNHCGG
Trigger: TCCTCCACAGTGATTTGGCCAGTTGTATTTCACGGT...AGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GTGCAGAGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGACCGTGAAATACAACTaGCCAAATCACTGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: VQSLLIEKDEILRGLRAKTVKYN*PNHCGG
Trigger: TCCTCCACAGTGATTTGGCCAGTTGTATTTCACGGT...CTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCTCTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTTTAGAGGGTATAAGTTaGAGGTGGAAGGAATGGCCT +
Preference number: 4 (lower is better)
Translates to: AGGSNSSQYNSNLTSFCLLEGIS*RWKEWP
Trigger: AGGCCATTCCTTCCACCTCCAACTTATACCCTCTAA...AAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTGAGATAATGCTTGTGTaGGAATTTGGGCAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: AGGSNSSQYNSNLTSFCLEIMLV*EFGQKL
Trigger: GAGCTTCTGCCCAAATTCCCACACAAGCATTATCTC...AAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GATTCTCAATTTAGCATGAGCGGAGGCCCTTGGGATTTACAGTCAGATGAATGTGAGATAATGCTTGTGTaGGAATTTGGGCAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: DSQFSMSGGPWDLQSDECEIMLV*EFGQKL
Trigger: GAGCTTCTGCCCAAATTCCCACACAAGCATTATCTC...ACATTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR CAA 72 bp GTGTCTGTTAGCAATCAGATAGCCTACAAGGCCGTCTaGATGGGTATGATCACCACCTCAAATTCTTGGAAA +
Preference number: 4 (lower is better)
Translates to: VSVSNQIAYKAV*MGMITTSNSWK
Trigger: TTTCCAAGAATTTGAGGTGGTGATCATACCCATCAAGACGGCCTTGTAGGCTATCTGATTGCTAACAGACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp TGGGACACTAAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACAGTATTCCTCCTCCTCTaGCTCAAGACTAAACACAGT +
Preference number: 4 (lower is better)
Translates to: WDTKTQNKDTLQDKAGKTVFLLL*LKTKHS
Trigger: ACTGTGTTTAGTCTTGAGTCAGAGGAGGAGGAATAC...TGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTTAGTGTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CTCTGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCGTATTCCTCCTCCTCTaGCTCAAGACTAAACACAGT +
Preference number: 4 (lower is better)
Translates to: LCVHISKIPKGSIFTRWSVFLLL*LKTKHS
Trigger: ACTGTGTTTAGTCTTGAGTCAGAGGAGGAGGAATAC...GCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp TGGGTGAACCAGAAGGTCAACAGTTGCATTTCTTCATCTAGAATGTTCTCTAGATGCTATCTTCTGCAGTaGTTCCAGGGTATTCCTCCT +
Preference number: 4 (lower is better)
Translates to: WVNQKVNSCISSSRMFSRCYLLQ*FQGIPP
Trigger: AGGAGGAATACCCTGGAATCACTGCAGAAGATAGCA...TCTAGAGAACATTCTAGATGAAGAAATGCAACTGTTGACCTTCTGGTTCACCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CTCTGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCACAGAGCAGTTGAGATaGGGTCTAAGGACTAACAAG +
Preference number: 4 (lower is better)
Translates to: LCVHISKIPKGSIFTRWSTEQLR*GLRTNK
Trigger: CTTGTTAGTCCTTAGACCTCATCTCAACTGCTCTGT...GCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GTGAACCAGAAGGTCAACAGTTGCATTTCTTCATCTAGAATGTTCTCTAGAAGGCAAAGCCTGAGGAAATaGACAGTAGCTGTGGGTCAA +
Preference number: 4 (lower is better)
Translates to: VNQKVNSCISSSRMFSRRQSLRK*TVAVGQ
Trigger: TTGACCCACAGCTACTGTTCATTTCCTCAGGCTTTG...CCTTCTAGAGAACATTCTAGATGAAGAAATGCAACTGTTGACCTTCTGGTTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp TGGGTGAACCAGAAGGTCAACAGTTGCATTTCTTCATCTAGAATGTTCTCTAGACAAAGCCTGAGGAAATaGACAGTAGCTGTGGGTCAA +
Preference number: 4 (lower is better)
Translates to: WVNQKVNSCISSSRMFSRQSLRK*TVAVGQ
Trigger: TTGACCCACAGCTACTGTTCATTTCCTCAGGCTTTG...TCTAGAGAACATTCTAGATGAAGAAATGCAACTGTTGACCTTCTGGTTCACCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGCAGGTTACTGTCATATTATTaGGGGAATCAGCGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: VHISKIPKGSIFTRWSCRLLSYY*GNQRKA
Trigger: GGCTTTGCGCTGATTCCCTCAATAATATGACAGTAA...CCTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATTATCCAGTATGTCGCTaGGATGTTAAACGAGATAAT +
Preference number: 4 (lower is better)
Translates to: QSVPQMSRQLLEVQIPANYPVCR*DVKRDN
Trigger: ATTATCTCGTTTAACATCTCAGCGACATACTGGATA...ATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp ATCATGATAGTAGGCTATAACTCAAGTTTCAATGCCACGATGGTCGTGCTTTCTTGGCTCAGGAGCATTTaGAATGCTTTATGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: IMIVGYNSSFNATMVVLSWLRSI*NALWRG
Trigger: GCCTCTCCATAAAGCATTGCAAATGCTCCTGAGCCA...AGAAAGCACGACCATCGTGGCATTGAAACTTGAGTTATAGCCTACTATCATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS-3UTR GCA 90 bp GTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGCAGGGTCATTGCTATCTTCTaGAGTGATTCCAGGGTATTC +
Preference number: 4 (lower is better)
Translates to: VHISKIPKGSIFTRWSCRVIAIF*SDSRVF
Trigger: GAATACCCTGGAATCACTGCAGAAGATAGCAATGAC...CCTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTGTCATTGCTATCTTCTaGAGTGATTCCAGGGTATTC +
Preference number: 4 (lower is better)
Translates to: CWRFKFQPIQLQPYILLSVIAIF*SDSRVF
Trigger: GAATACCCTGGAATCACTGCAGAAGATAGCAATGAC...AGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CTCTGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTCTCTCCAGCTCCGTTaGTGTCTAAGCTTTTCACTT +
Preference number: 4 (lower is better)
Translates to: LCVHISKIPKGSIFTRWSSLQLR*CLSFSL
Trigger: AAGTGAAAAGCTTAGACAGCAACGGAGCTGGAGAGA...GCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTTCAAATGTCCAGACAGCTaGTGGAGGTTCAAATTCCAG +
Preference number: 4 (lower is better)
Translates to: WRFKFQPIQLQPYILLSFKCPDS*WRFKFQ
Trigger: CTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTT...GAAAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TTTCTCTGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGTGCCTAACATGCCACTaGCATGTTGAGCAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: FLCVHISKIPKGSIFTRWCLTCH*HVEQKS
Trigger: GGACTTCTGCTCAACATGGCAGTGGCATGTTAGGCA...CCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACAGAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TGGGTGAACCAGAAGGTCAACAGTTGCATTTCTTCATCTAGAATGTTCTCTAGATCAGATGAATGTGAATaGCCCACCTCAAGCCCTAAC +
Preference number: 4 (lower is better)
Translates to: WVNQKVNSCISSSRMFSRSDECE*PTSSPN
Trigger: GTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGA...TCTAGAGAACATTCTAGATGAAGAAATGCAACTGTTGACCTTCTGGTTCACCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AGTTGTTGCTGCTTTCACCTCTTCTTCATCAAGTTCTACAAACAGAGATGTAGCCTAGCCAGAGTTACTTaGAGTTGCACTCACAAGTGG +
Preference number: 4 (lower is better)
Translates to: SCCCFHLFFIKFYKQRCSLARVT*SCTHKW
Trigger: CCACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAG...GCTACATCTCTGTTTGTAGAACTTGATGAAGAAGAGGTGAAAGCAGCAACAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp CTATCCCAATTCTTCCTAAGTAAACCCTCTCTCGCTAAAGCAGTGGGTCTCAATGATAACGCACCAGTTTaGTCTTCACCTATGCAAACA +
Preference number: 4 (lower is better)
Translates to: LSQFFLSKPSLAKAVGLNDNAPV*SSPMQT
Trigger: TGTTTGCATAGGTGAAGAGCAAACTGGTGCGTTATC...ATTGAGACCCACTGCTTTAGCGAGAGAGGGTTTACTTAGGAAGAATTGGGATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GTGAACCAGAAGGTCAACAGTTGCATTTCTTCATCTAGAATGTTCTCTAGAAGGGAAGAACAGGGATGCTaGCACATCCTGTTAACTCAG +
Preference number: 4 (lower is better)
Translates to: VNQKVNSCISSSRMFSRREEQGC*HILLTQ
Trigger: CTGAGTTAACAGGATGTGGCAGCATCCCTGTTCTTC...CCTTCTAGAGAACATTCTAGATGAAGAAATGCAACTGTTGACCTTCTGGTTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CTAAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACACACAAACGAAGAACAGGGATGCTaGCACATCCTGTTAACTCAG +
Preference number: 4 (lower is better)
Translates to: LKHRTKTRYRIKLERHTNEEQGC*HILLTQ
Trigger: CTGAGTTAACAGGATGTGGCAGCATCCCTGTTCTTC...GTTTGTGTGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TTTCTCTGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGGCAAAAAGCAGGAGCTaGAGTAGGAAGCAGTCCTCA +
Preference number: 4 (lower is better)
Translates to: FLCVHISKIPKGSIFTRWAKSRS*SRKQSS
Trigger: TGAGGACTGCTTCCTACTGCAGCTCCTGCTTTTTGC...CCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACAGAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACACACAAACATGCAAAAAGCAGGAGCTaGAGTAGGAAGCAGTCCTCA +
Preference number: 4 (lower is better)
Translates to: KTQNKDTLQDKAGKTHKHAKSRS*SRKQSS
Trigger: TGAGGACTGCTTCCTACTGCAGCTCCTGCTTTTTGC...ATGTTTGTGTGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTGGCAAGGAGACTACTTaGCTTACTGTCATATTATTG +
Preference number: 4 (lower is better)
Translates to: VPQMSRQLLEVQIPANTTGKETT*LTVILL
Trigger: CAATAATATGACAGTAAGGCAAGTAGTCTCCTTGCC...AGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CTCTGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGTACATTCCCGAAATaGCTGATATGTCACTGGCCT +
Preference number: 4 (lower is better)
Translates to: LCVHISKIPKGSIFTRWSCTFPK*LICHWP
Trigger: AGGCCAGTGACATATCAGGCATTTCGGGAATGTACA...GCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000498133.5
ENST00000543133.5
CDS-3UTR GCA 90 bp ATCATGATAGTAGGCTATAACTCAAGTTTCAATGCCACGATGGTCGTGCTTTCTGGGATTACAGGCACATaGCACCAAGCCCAGTTAATT +
Preference number: 4 (lower is better)
Translates to: IMIVGYNSSFNATMVVLSGITGT*HQAQLI
Trigger: AATTAACTGGGCTTGGTGGCATGTGCCTGTAATCCC...AGAAAGCACGACCATCGTGGCATTGAAACTTGAGTTATAGCCTACTATCATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS-3UTR CCA 90 bp GCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTACTTTTTCTCCAAGATaGGCCAAGCAGTCTTCCATT +
Preference number: 4 (lower is better)
Translates to: AGGSNSSQYNSNLTSFCLTFSPR*AKQSSI
Trigger: AATGGAAGACTGCTTGGCCCATCTTGGAGAAAAAGT...AAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR CCA 90 bp TGGGACACTAAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACAGGCTCTTTCAGTTCCTaGGACACTTTTTCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: WDTKTQNKDTLQDKAGKTGSFSS*DTFSPR
Trigger: TCTTGGAGAAAAAGTGTCCCAGGAACTGAAAGAGCC...TGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTTAGTGTCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GAATTAGAGGAGTTGTTCTCACTCTTCTCTCCAGCTCCGTTGCTGTCTAAGCTTATTTGCAATGCTTTATaGAGAGGCTCTTTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: ELEELFSLFSPAPLLSKLICNAL*RGSFSS
Trigger: GGAACTGAAAGAGCCTCTCCATAAAGCATTGCAAAT...AAGCTTAGACAGCAACGGAGCTGGAGAGAAGAGTGAGAACAACTCCTCTAATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355028.4
ENST00000399777.1
CDS-3UTR CCA 90 bp TTTCTCTGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGTGTCCAGACAGCTGCTaGAGGTTCAAATTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: FLCVHISKIPKGSIFTRWCPDSC*RFKFQP
Trigger: TGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACA...CCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACAGAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AGGAGTTGTTCTCACTCTTCTCTCCAGCTCCGTTGCTGTCTAAGCTTTTCACTTCTAAGTTCTCTCAGCTaGGAATTTCTATCCCAATTC +
Preference number: 4 (lower is better)
Translates to: RSCSHSSLQLRCCLSFSLLSSLS*EFLSQF
Trigger: GAATTGGGATAGAAATTCCCAGCTGAGAGAACTTAG...AAGTGAAAAGCTTAGACAGCAACGGAGCTGGAGAGAAGAGTGAGAACAACTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp CTATCCCAATTCTTCCTAAGTAAACCCTCTCTCGCTAAAGCAGTGGGTCTCAATTATTCTTTCCTTTCGTaGGCAACACAGGCTCCAATT +
Preference number: 4 (lower is better)
Translates to: LSQFFLSKPSLAKAVGLNYSFLS*ATQAPI
Trigger: AATTGGAGCCTGTGTTGCCCACGAAAGGAAAGAATA...ATTGAGACCCACTGCTTTAGCGAGAGAGGGTTTACTTAGGAAGAATTGGGATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACGGAATGTCTAACAGGTaGGAAAATAAAGCAGCAAGT +
Preference number: 4 (lower is better)
Translates to: DLQSDECECPTSSPNMPNGMSNR*ENKAAS
Trigger: ACTTGCTGCTTTATTTTCCCACCTGTTAGACATTCC...GTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACACACAAACATTGCATCTGGTATCCCTaGGACAGAAATGCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: KTQNKDTLQDKAGKTHKHCIWYP*DRNAGE
Trigger: CTCACCTGCATTTCTGTCCCAGGGATACCAGATGCA...ATGTTTGTGTGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACACACAAACATGGTAGTGGCTGCATCTaGTATCCCTGGGACAGAAAT +
Preference number: 4 (lower is better)
Translates to: KTQNKDTLQDKAGKTHKHGSGCI*YPWDRN
Trigger: ATTTCTGTCCCAGGGATACCAGATGCAGCCACTACC...ATGTTTGTGTGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTTGCCTGATATGTCACTaGCCTTCAGAAATTTCTTTG +
Preference number: 4 (lower is better)
Translates to: VPQMSRQLLEVQIPANTTCLICH*PSEISL
Trigger: CAAAGAAATTTCTGAAGGCCAGTGACATATCAGGCA...AGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498133.5
ENST00000543133.5
3UTR CAA 72 bp ATCTCATACCTTTCAGGAGAAAGGCAAGGAGACTACTaGCCTTACTGTCATATTATTGAGGGAATCAGCGCA +
Preference number: 4 (lower is better)
Translates to: ISYLSGERQGDY*PYCHIIEGISA
Trigger: TGCGCTGATTCCCTCAATAATATGACAGTAAGGCAAGTAGTCTCCTTGCCTTTCTCCTGAAAGGTATGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp ATCATGATAGTAGGCTATAACTCAAGTTTCAATGCCACGATGGTCGTGCTTTCTCAAAGCCTGTGCTGGTaGAGGCTTCAGAAATTTCTT +
Preference number: 4 (lower is better)
Translates to: IMIVGYNSSFNATMVVLSQSLCW*RLQKFL
Trigger: AAGAAATTTCTGAAGCCTTCACCAGCACAGGCTTTG...AGAAAGCACGACCATCGTGGCATTGAAACTTGAGTTATAGCCTACTATCATGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS-3UTR TCA 90 bp AGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCACAAAGCCTGTGCTGGTaGAGGCTTCAGAAATTTCTT +
Preference number: 4 (lower is better)
Translates to: SLLIEKDEILRGLRAKKSQSLCW*RLQKFL
Trigger: AAGAAATTTCTGAAGCCTTCACCAGCACAGGCTTTG...TGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCAGTATTCCTCCTCCTCTaGCTCAAGACTAAACACAGT +
Preference number: 4 (lower is better)
Translates to: SLLIEKDEILRGLRAKKSVFLLL*LKTKHS
Trigger: ACTGTGTTTAGTCTTGAGTCAGAGGAGGAGGAATAC...TGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp TGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTGCTCATCGAGAAAGATaGAATTCTAAGGGGATTAAG +
Preference number: 4 (lower is better)
Translates to: CWRFKFQPIQLQPYILLSAHRER*NSKGIK
Trigger: CTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGC...AGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GATTCTCAATTTAGCATGAGCGGAGGCCCTTGGGATTTACAGTCAGATGAATGTGCTCATCGAGAAAGATaGAATTCTAAGGGGATTAAG +
Preference number: 4 (lower is better)
Translates to: DSQFSMSGGPWDLQSDECAHRER*NSKGIK
Trigger: CTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGC...ACATTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACACACAAACATTGGCTCAGGAGCATTTaGAATGCTTTATGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: KTQNKDTLQDKAGKTHKHWLRSI*NALWRG
Trigger: GCCTCTCCATAAAGCATTGCAAATGCTCCTGAGCCA...ATGTTTGTGTGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TGGGACACTAAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACAGTCATTGCTATCTTCTaGAGTGATTCCAGGGTATTC +
Preference number: 4 (lower is better)
Translates to: WDTKTQNKDTLQDKAGKTVIAIF*SDSRVF
Trigger: GAATACCCTGGAATCACTGCAGAAGATAGCAATGAC...TGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTTAGTGTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTTCGTCATTGCTATCTTCTaGAGTGATTCCAGGGTATTC +
Preference number: 4 (lower is better)
Translates to: WRFKFQPIQLQPYILLSFVIAIF*SDSRVF
Trigger: GAATACCCTGGAATCACTGCAGAAGATAGCAATGAC...GAAAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TTTCTCTGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGTTCTTCAGGATCCATTaGAATCTGCTGCCAGGACTC +
Preference number: 4 (lower is better)
Translates to: FLCVHISKIPKGSIFTRWFFRIH*NLLPGL
Trigger: GAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAA...CCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACAGAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GTGAACCAGAAGGTCAACAGTTGCATTTCTTCATCTAGAATGTTCTCTAGAAGGAAGGCTCTCTTCCCTTaGGTTTATCTCCTTCTCACT +
Preference number: 4 (lower is better)
Translates to: VNQKVNSCISSSRMFSRRKALFP*VYLLLT
Trigger: AGTGAGAAGGAGATAAACGCAAGGGAAGAGAGCCTT...CCTTCTAGAGAACATTCTAGATGAAGAAATGCAACTGTTGACCTTCTGGTTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CTAAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACACACAAACAAATGTCCAGACAGCTaGTGGAGGTTCAAATTCCAG +
Preference number: 4 (lower is better)
Translates to: LKHRTKTRYRIKLERHTNKCPDS*WRFKFQ
Trigger: CTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTT...GTTTGTGTGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TTTCTCTGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGCTAACATGCCTAACATaGCACTGCCATGTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: FLCVHISKIPKGSIFTRWLTCLT*HCHVEQ
Trigger: CTGCTCAACATGGCAGTGGCATGTTAGGCATGTTAG...CCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACAGAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp ATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCAGTAGCTGAGCTAACATGCCTAACATaGCACTGCCATGTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: IEKDEILRGLRAKKSVAELTCLT*HCHVEQ
Trigger: CTGCTCAACATGGCAGTGGCATGTTAGGCATGTTAG...CTCAGCTACTGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TTTCTCTGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGTGGGTGCAGAGCCTaGTCATCGAGAAAGATGAAA +
Preference number: 4 (lower is better)
Translates to: FLCVHISKIPKGSIFTRWSGCRA*SSRKMK
Trigger: TTTCATCTTTCTCGATGAGCAGGCTCTGCACCCACT...CCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACAGAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TTTCTCTGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGCTAGCCAGAGTTACTTaGAGTTGCACTCACAAGTGG +
Preference number: 4 (lower is better)
Translates to: FLCVHISKIPKGSIFTRWLARVT*SCTHKW
Trigger: CCACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAG...CCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACAGAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACGAGGAAAGAAAATTATaGCGATGCTCAACTAGCATA +
Preference number: 4 (lower is better)
Translates to: DLQSDECECPTSSPNMPNEERKL*RCSTSI
Trigger: TATGCTAGTTGAGCATCGGCATAATTTTCTTTCCTC...GTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TTTCTCTGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGGAAGAACAGGGATGCTaGCACATCCTGTTAACTCAG +
Preference number: 4 (lower is better)
Translates to: FLCVHISKIPKGSIFTRWEEQGC*HILLTQ
Trigger: CTGAGTTAACAGGATGTGGCAGCATCCCTGTTCTTC...CCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACAGAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTGGCAAGGAGACTACTTaGCTTACTGTCATATTATTG +
Preference number: 4 (lower is better)
Translates to: CWRFKFQPIQLQPYILLSGKETT*LTVILL
Trigger: CAATAATATGACAGTAAGGCAAGTAGTCTCCTTGCC...AGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp ATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCAGTAGCTGAGAGGACGCCATTGAATTaGCTGGTGAGGCTCCAAAAA +
Preference number: 4 (lower is better)
Translates to: IEKDEILRGLRAKKSVAERTPLN*LVRLQK
Trigger: TTTTTGGAGCCTCACCAGCCAATTCAATGGCGTCCT...CTCAGCTACTGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000616863.4
CDS-3UTR CCA 90 bp TTTCTCTGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGGTCCAGAGTTGTCGCTaGGCAGGATGTAAATGTCAT +
Preference number: 4 (lower is better)
Translates to: FLCVHISKIPKGSIFTRWVQSCR*AGCKCH
Trigger: ATGACATTTACATCCTGCCCAGCGACAACTCTGGAC...CCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACAGAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp ATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCAGTAGCTGAGGTCCAGAGTTGTCGCTaGGCAGGATGTAAATGTCAT +
Preference number: 4 (lower is better)
Translates to: IEKDEILRGLRAKKSVAEVQSCR*AGCKCH
Trigger: ATGACATTTACATCCTGCCCAGCGACAACTCTGGAC...CTCAGCTACTGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CTATCCCAATTCTTCCTAAGTAAACCCTCTCTCGCTAAAGCAGTGGGTCTCAATCTAAGTTCTCTCAGCTaGGAATTTCTATCCCAATTC +
Preference number: 4 (lower is better)
Translates to: LSQFFLSKPSLAKAVGLNLSSLS*EFLSQF
Trigger: GAATTGGGATAGAAATTCCCAGCTGAGAGAACTTAG...ATTGAGACCCACTGCTTTAGCGAGAGAGGGTTTACTTAGGAAGAATTGGGATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTCTAAGTTCTCTCAGCTaGGAATTTCTATCCCAATTC +
Preference number: 4 (lower is better)
Translates to: AGGSNSSQYNSNLTSFCLLSSLS*EFLSQF
Trigger: GAATTGGGATAGAAATTCCCAGCTGAGAGAACTTAG...AAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp TGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTTCGTGAGGATCCAGAACTaGCAAGTGTTAATACTGGAA +
Preference number: 4 (lower is better)
Translates to: WRFKFQPIQLQPYILLSFVRIQN*QVLILE
Trigger: TTCCAGTATTAACACTTGCCAGTTCTGGATCCTCAC...GAAAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GTGAACCAGAAGGTCAACAGTTGCATTTCTTCATCTAGAATGTTCTCTAGAAGGACCGTGAAATACAACTaGCCAAATCACTGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: VNQKVNSCISSSRMFSRRTVKYN*PNHCGG
Trigger: TCCTCCACAGTGATTTGGCCAGTTGTATTTCACGGT...CCTTCTAGAGAACATTCTAGATGAAGAAATGCAACTGTTGACCTTCTGGTTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GTGCAGAGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGACCAGAGAAAGCCAATaGAAAACACTATCTAGTTCC +
Preference number: 4 (lower is better)
Translates to: VQSLLIEKDEILRGLRAKTRESQ*KTLSSS
Trigger: GGAACTAGATAGTGTTTTCCATTGGCTTTCTCTGGT...CTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCTCTGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp ATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCAGTAGCTGAGGGTATAAGTTGGAGGTaGAAGGAATGGCCTCCTACT +
Preference number: 4 (lower is better)
Translates to: IEKDEILRGLRAKKSVAEGISWR*KEWPPT
Trigger: AGTAGGAGGCCATTCCTTCCACCTCCAACTTATACC...CTCAGCTACTGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCATTAGAGGGTATAAGTTaGAGGTGGAAGGAATGGCCT +
Preference number: 4 (lower is better)
Translates to: SLLIEKDEILRGLRAKKSLEGIS*RWKEWP
Trigger: AGGCCATTCCTTCCACCTCCAACTTATACCCTCTAA...TGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GTGAACCAGAAGGTCAACAGTTGCATTTCTTCATCTAGAATGTTCTCTAGAAGGGGAGTCCCAAGTAGCTaGGAACAACATACTTTGTTT +
Preference number: 4 (lower is better)
Translates to: VNQKVNSCISSSRMFSRRGVPSS*EQHTLF
Trigger: AAACAAAGTATGTTGTTCTCAGCTACTTGGGACTCC...CCTTCTAGAGAACATTCTAGATGAAGAAATGCAACTGTTGACCTTCTGGTTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000616863.4
CDS-3UTR TCA 90 bp ATCATGATAGTAGGCTATAACTCAAGTTTCAATGCCACGATGGTCGTGCTTTCTGGAGTCCCAAGTAGCTaGGAACAACATACTTTGTTT +
Preference number: 4 (lower is better)
Translates to: IMIVGYNSSFNATMVVLSGVPSS*EQHTLF
Trigger: AAACAAAGTATGTTGTTCTCAGCTACTTGGGACTCC...AGAAAGCACGACCATCGTGGCATTGAAACTTGAGTTATAGCCTACTATCATGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS-3UTR TCA 90 bp AAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACACACAAACATGTATTCCTCCTCCTCTaGCTCAAGACTAAACACAGT +
Preference number: 4 (lower is better)
Translates to: KTQNKDTLQDKAGKTHKHVFLLL*LKTKHS
Trigger: ACTGTGTTTAGTCTTGAGTCAGAGGAGGAGGAATAC...ATGTTTGTGTGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp TGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGCAGGCTCATCGAGAAAGATaGAATTCTAAGGGGATTAAG +
Preference number: 4 (lower is better)
Translates to: CTYFEDSQRQHFYKVELQAHRER*NSKGIK
Trigger: CTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGC...CTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACACACAAACATACAGAGCAGTTGAGATaGGGTCTAAGGACTAACAAG +
Preference number: 4 (lower is better)
Translates to: KTQNKDTLQDKAGKTHKHTEQLR*GLRTNK
Trigger: CTTGTTAGTCCTTAGACCTCATCTCAACTGCTCTGT...ATGTTTGTGTGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCATTACTGTCATATTATTaGGGGAATCAGCGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: SLLIEKDEILRGLRAKKSLLSYY*GNQRKA
Trigger: GGCTTTGCGCTGATTCCCTCAATAATATGACAGTAA...TGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CTAAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACACACAAACCAGGAGCATTTGCAATaGTTTATGGAGAGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: LKHRTKTRYRIKLERHTNQEHLQ*FMERLF
Trigger: AAAGAGCCTCTCCATAAAGCATTGCAAATGCTCCTG...GTTTGTGTGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR GCA 90 bp ATCATGATAGTAGGCTATAACTCAAGTTTCAATGCCACGATGGTCGTGCTTTCTCAGGAGCATTTGCAATaGTTTATGGAGAGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: IMIVGYNSSFNATMVVLSQEHLQ*FMERLF
Trigger: AAAGAGCCTCTCCATAAAGCATTGCAAATGCTCCTG...AGAAAGCACGACCATCGTGGCATTGAAACTTGAGTTATAGCCTACTATCATGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS-3UTR GCA 90 bp AGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCACAGGAGCATTTGCAATaGTTTATGGAGAGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: SLLIEKDEILRGLRAKKSQEHLQ*FMERLF
Trigger: AAAGAGCCTCTCCATAAAGCATTGCAAATGCTCCTG...TGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TTTCTCTGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGTCTCTCCAGCTCCGTTaGTGTCTAAGCTTTTCACTT +
Preference number: 4 (lower is better)
Translates to: FLCVHISKIPKGSIFTRWSLQLR*CLSFSL
Trigger: AAGTGAAAAGCTTAGACAGCAACGGAGCTGGAGAGA...CCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACAGAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CTCTGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTCTTCTTTCTCCACGTaGACAATGTCAGAATTAGAG +
Preference number: 4 (lower is better)
Translates to: LCVHISKIPKGSIFTRWSSSFST*TMSELE
Trigger: CTCTAATTCTGACATTGTGCACGTGGAGAAAGAAGA...GCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCAAGGTTCAGTTGTTGCTaGTTTCACCTCTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: SLLIEKDEILRGLRAKKSRFSCC*FHLFFI
Trigger: GATGAAGAAGAGGTGAAAGCAGCAACAACTGAACCT...TGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACACACAAACATAAGGCTCTCTTCCCTTaGGTTTATCTCCTTCTCACT +
Preference number: 4 (lower is better)
Translates to: KTQNKDTLQDKAGKTHKHKALFP*VYLLLT
Trigger: AGTGAGAAGGAGATAAACGCAAGGGAAGAGAGCCTT...ATGTTTGTGTGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTGAGGAAAGAAAATTATaGCGATGCTCAACTAGCATA +
Preference number: 4 (lower is better)
Translates to: AGGSNSSQYNSNLTSFCLEERKL*RCSTSI
Trigger: TATGCTAGTTGAGCATCGGCATAATTTTCTTTCCTC...AAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTGAGGAAAGAAAATTATaGCGATGCTCAACTAGCATA +
Preference number: 4 (lower is better)
Translates to: CWRFKFQPIQLQPYILLSEERKL*RCSTSI
Trigger: TATGCTAGTTGAGCATCGGCATAATTTTCTTTCCTC...AGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp ATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCAGTAGCTGAGAAGGAAGAACAGGGATaGTGCCACATCCTGTTAACT +
Preference number: 4 (lower is better)
Translates to: IEKDEILRGLRAKKSVAEKEEQG*CHILLT
Trigger: AGTTAACAGGATGTGGCAGCATCCCTGTTCTTCCTT...CTCAGCTACTGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TTTCTCTGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAAGGAAGAACAGGGATaGTGCCACATCCTGTTAACT +
Preference number: 4 (lower is better)
Translates to: FLCVHISKIPKGSIFTRWKEEQG*CHILLT
Trigger: AGTTAACAGGATGTGGCAGCATCCCTGTTCTTCCTT...CCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACAGAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CTCTGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCGGCAAGGAGACTACTTaGCTTACTGTCATATTATTG +
Preference number: 4 (lower is better)
Translates to: LCVHISKIPKGSIFTRWSGKETT*LTVILL
Trigger: CAATAATATGACAGTAAGGCAAGTAGTCTCCTTGCC...GCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp ATCATGATAGTAGGCTATAACTCAAGTTTCAATGCCACGATGGTCGTGCTTTCTACTTTTTCTCCAAGATaGGCCAAGCAGTCTTCCATT +
Preference number: 4 (lower is better)
Translates to: IMIVGYNSSFNATMVVLSTFSPR*AKQSSI
Trigger: AATGGAAGACTGCTTGGCCCATCTTGGAGAAAAAGT...AGAAAGCACGACCATCGTGGCATTGAAACTTGAGTTATAGCCTACTATCATGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS-3UTR CCA 90 bp ATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCAGTAGCTGAGGGCTCTTTCAGTTCCTaGGACACTTTTTCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: IEKDEILRGLRAKKSVAEGSFSS*DTFSPR
Trigger: TCTTGGAGAAAAAGTGTCCCAGGAACTGAAAGAGCC...CTCAGCTACTGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR CCA 90 bp TGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGCAGATTTGCAATGCTTTATaGAGAGGCTCTTTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: CTYFEDSQRQHFYKVELQICNAL*RGSFSS
Trigger: GGAACTGAAAGAGCCTCTCCATAAAGCATTGCAAAT...CTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR CCA 90 bp TGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTTCACCAGAGAAAGCCAATaGAAAACACTATCTAGTTCC +
Preference number: 4 (lower is better)
Translates to: WRFKFQPIQLQPYILLSFTRESQ*KTLSSS
Trigger: GGAACTAGATAGTGTTTTCCATTGGCTTTCTCTGGT...GAAAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACACACAAACATCAGAGGCACCAAAATTaGCTCAGGAGCATTTGCAAT +
Preference number: 4 (lower is better)
Translates to: KTQNKDTLQDKAGKTHKHQRHQN*LRSICN
Trigger: ATTGCAAATGCTCCTGAGCCAATTTTGGTGCCTCTG...ATGTTTGTGTGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418951.6
CDS-3UTR CCA 90 bp ATCATGATAGTAGGCTATAACTCAAGTTTCAATGCCACGATGGTCGTGCTTTCTGTTTCAATGCCACGATaGTCGTGCTTTCTGATGAAA +
Preference number: 4 (lower is better)
Translates to: IMIVGYNSSFNATMVVLSVSMPR*SCFLMK
Trigger: TTTCATCAGAAAGCACGACCATCGTGGCATTGAAAC...AGAAAGCACGACCATCGTGGCATTGAAACTTGAGTTATAGCCTACTATCATGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS-3UTR TCA 90 bp TTTCTCTGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGTTACTGTCATATTATTaGGGGAATCAGCGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: FLCVHISKIPKGSIFTRWLLSYY*GNQRKA
Trigger: GGCTTTGCGCTGATTCCCTCAATAATATGACAGTAA...CCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACAGAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp TGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTTCTATCCAGTATGTCGCTaGGATGTTAAACGAGATAAT +
Preference number: 4 (lower is better)
Translates to: WRFKFQPIQLQPYILLSFYPVCR*DVKRDN
Trigger: ATTATCTCGTTTAACATCTCAGCGACATACTGGATA...GAAAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CTCTGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTATCCAGTATGTCGCTaGGATGTTAAACGAGATAAT +
Preference number: 4 (lower is better)
Translates to: LCVHISKIPKGSIFTRWSYPVCR*DVKRDN
Trigger: ATTATCTCGTTTAACATCTCAGCGACATACTGGATA...GCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp ATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCAGTAGCTGAGGATAACGCACCAGTTTaGTCTTCACCTATGCAAACA +
Preference number: 4 (lower is better)
Translates to: IEKDEILRGLRAKKSVAEDNAPV*SSPMQT
Trigger: TGTTTGCATAGGTGAAGAGCAAACTGGTGCGTTATC...CTCAGCTACTGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp ATCATGATAGTAGGCTATAACTCAAGTTTCAATGCCACGATGGTCGTGCTTTCTAAAAAGGTCTACTTATaGATGTGTAAAACCTGGCCC +
Preference number: 4 (lower is better)
Translates to: IMIVGYNSSFNATMVVLSKKVYL*MCKTWP
Trigger: GGGCCAGGTTTTACACATCCATAAGTAGACCTTTTT...AGAAAGCACGACCATCGTGGCATTGAAACTTGAGTTATAGCCTACTATCATGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS-3UTR CCA 90 bp ATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCAGTAGCTGAGACTTTTTCTCCAAGATaGGCCAAGCAGTCTTCCATT +
Preference number: 4 (lower is better)
Translates to: IEKDEILRGLRAKKSVAETFSPR*AKQSSI
Trigger: AATGGAAGACTGCTTGGCCCATCTTGGAGAAAAAGT...CTCAGCTACTGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CTAAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACACACAAACATTTGCAATGCTTTATaGAGAGGCTCTTTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: LKHRTKTRYRIKLERHTNICNAL*RGSFSS
Trigger: GGAACTGAAAGAGCCTCTCCATAAAGCATTGCAAAT...GTTTGTGTGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACACACAAACATGTGAGGATCCAGAACTaGCAAGTGTTAATACTGGAA +
Preference number: 4 (lower is better)
Translates to: KTQNKDTLQDKAGKTHKHVRIQN*QVLILE
Trigger: TTCCAGTATTAACACTTGCCAGTTCTGGATCCTCAC...ATGTTTGTGTGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp ATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCAGTAGCTGAGTATTCTTTCCTTTCGTaGGCAACACAGGCTCCAATT +
Preference number: 4 (lower is better)
Translates to: IEKDEILRGLRAKKSVAEYSFLS*ATQAPI
Trigger: AATTGGAGCCTGTGTTGCCCACGAAAGGAAAGAATA...CTCAGCTACTGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp TGGGTGAACCAGAAGGTCAACAGTTGCATTTCTTCATCTAGAATGTTCTCTAGAACCAGAGAAAGCCAATaGAAAACACTATCTAGTTCC +
Preference number: 4 (lower is better)
Translates to: WVNQKVNSCISSSRMFSRTRESQ*KTLSSS
Trigger: GGAACTAGATAGTGTTTTCCATTGGCTTTCTCTGGT...TCTAGAGAACATTCTAGATGAAGAAATGCAACTGTTGACCTTCTGGTTCACCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CTAAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACACACAAACACCAGAGAAAGCCAATaGAAAACACTATCTAGTTCC +
Preference number: 4 (lower is better)
Translates to: LKHRTKTRYRIKLERHTNTRESQ*KTLSSS
Trigger: GGAACTAGATAGTGTTTTCCATTGGCTTTCTCTGGT...GTTTGTGTGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp TGGGTGAACCAGAAGGTCAACAGTTGCATTTCTTCATCTAGAATGTTCTCTAGATATCCAGTATGTCGCTaGGATGTTAAACGAGATAAT +
Preference number: 4 (lower is better)
Translates to: WVNQKVNSCISSSRMFSRYPVCR*DVKRDN
Trigger: ATTATCTCGTTTAACATCTCAGCGACATACTGGATA...TCTAGAGAACATTCTAGATGAAGAAATGCAACTGTTGACCTTCTGGTTCACCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TGGGTGAACCAGAAGGTCAACAGTTGCATTTCTTCATCTAGAATGTTCTCTAGAGAGGAAAGAAAATTATaGCGATGCTCAACTAGCATA +
Preference number: 4 (lower is better)
Translates to: WVNQKVNSCISSSRMFSREERKL*RCSTSI
Trigger: TATGCTAGTTGAGCATCGGCATAATTTTCTTTCCTC...TCTAGAGAACATTCTAGATGAAGAAATGCAACTGTTGACCTTCTGGTTCACCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp TTTCTCTGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGCTAAGTTCTCTCAGCTaGGAATTTCTATCCCAATTC +
Preference number: 4 (lower is better)
Translates to: FLCVHISKIPKGSIFTRWLSSLS*EFLSQF
Trigger: GAATTGGGATAGAAATTCCCAGCTGAGAGAACTTAG...CCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACAGAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp TTTCTCTGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGGGAATGTCTAACAGGTaGGAAAATAAAGCAGCAAGT +
Preference number: 4 (lower is better)
Translates to: FLCVHISKIPKGSIFTRWGMSNR*ENKAAS
Trigger: ACTTGCTGCTTTATTTTCCCACCTGTTAGACATTCC...CCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACAGAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp ATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCAGTAGCTGAGACCAGAGAAAGCCAATaGAAAACACTATCTAGTTCC +
Preference number: 4 (lower is better)
Translates to: IEKDEILRGLRAKKSVAETRESQ*KTLSSS
Trigger: GGAACTAGATAGTGTTTTCCATTGGCTTTCTCTGGT...CTCAGCTACTGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp ATCATGATAGTAGGCTATAACTCAAGTTTCAATGCCACGATGGTCGTGCTTTCTCTGATTAAATGTAAATaGACACGTACAGACTTCTGC +
Preference number: 4 (lower is better)
Translates to: IMIVGYNSSFNATMVVLSLIKCK*TRTDFC
Trigger: GCAGAAGTCTGTACGTGTCCATTTACATTTAATCAG...AGAAAGCACGACCATCGTGGCATTGAAACTTGAGTTATAGCCTACTATCATGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS TCA 90 bp CTCCGACCCGCGGCCCTAATCTACCGCCGCCGCCATGTTGGAGGGTaGGGTCACCCCGGCGTGCCTTCGTCACGGCCGGCGTCGGGGCGG +
Preference number: 5 (lower is better)
Translates to: LRPAALIYRRRHVGG*GHPGVPSSRPASGR
Trigger: CCGCCCCGACGCCGGCCGTGACGAAGGCACGCCGGGGTGACCTCACCCTCCAACATGGCGGCGGCGGTAGATTAGGGCCGCGGGTCGGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS TCA 90 bp GAGGCGGCGGCGGCAGTTGCTTCCGACAGGGTCCCCCAGCGGCGGTaGGTGCTCCGACCCGCGGCCCTAATCTACCGCCGCCGCCATGTT +
Preference number: 5 (lower is better)
Translates to: EAAAAVASDRVPQRR*VLRPAALIYRRRHV
Trigger: AACATGGCGGCGGCGGTAGATTAGGGCCGCGGGTCGGAGCACTCACCGCCGCTGGGGGACCCTGTCGGAAGCAACTGCCGCCGCCGCCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000464649.1
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS CCA 90 bp GTGAGTGCTCCGACCCGCGGCCCTAATCTACCGCCGCCGCCATGTTaGAGGGTGAGGTCACCCCGGCGTGCCTTCGTCACGGCCGGCGTC +
Preference number: 5 (lower is better)
Translates to: VSAPTRGPNLPPPPC*RVRSPRRAFVTAGV
Trigger: GACGCCGGCCGTGACGAAGGCACGCCGGGGTGACCTCACCCTCCAACATGGCGGCGGCGGTAGATTAGGGCCGCGGGTCGGAGCACTCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp GGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTTCAGTTGTTGCTGCTAGGCGGCGGCGGCAGTaGCTTCCGACAGGGTCCCCC +
Preference number: 5 (lower is better)
Translates to: GSSAGTTSSTSVGSVVAARRRRQ*LPTGSP
Trigger: GGGGGACCCTGTCGGAAGCAACTGCCGCCGCCGCCT...AGCAGCAACAACTGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CAA 90 bp GGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTAGGCGGCGGCGGCAGTaGCTTCCGACAGGGTCCCCC +
Preference number: 5 (lower is better)
Translates to: GEKGYQECLEGEMGEPEGRRRRQ*LPTGSP
Trigger: GGGGGACCCTGTCGGAAGCAACTGCCGCCGCCGCCT...ACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp CACTCAGCAGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGGGGGACAGTCTAGACTaGCCCTCAGACGGCGGCACG +
Preference number: 5 (lower is better)
Translates to: HSAAFLWVPVRGPPPPLQGDSLD*PSDGGT
Trigger: CGTGCCGCCGTCTGAGGGCAAGTCTAGACTGTCCCC...CTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CAA 90 bp AAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCGGGGACAGTCTAGACTaGCCCTCAGACGGCGGCACG +
Preference number: 5 (lower is better)
Translates to: KLRGLDRLSPEQALARGIGDSLD*PSDGGT
Trigger: CGTGCCGCCGTCTGAGGGCAAGTCTAGACTGTCCCC...GATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS TCA 90 bp GAAGGACCGACCAACGGAGGCCCCGGAGGTCTCTCCGTCCAGATGTaGCCTGAAGACCCAAACCCTCCTAGCCCGCCCAAATCTGATTGC +
Preference number: 5 (lower is better)
Translates to: EGPTNGGPGGLSVQM*PEDPNPPSPPKSDC
Trigger: GCAATCAGATTTGGGCGGGCTAGGAGGGTTTGGGTCTTCAGGTCACATCTGGACGGAGAGACCTCCGGGGCCTCCGTTGGTCGGTCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000337612.9
ENST00000399781.5
ENST00000399782.5
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp CGCCCGTGGGATCTTAGCAGGAACCTGGGGGTGAAGAGGAACAGTGCAGTCCCTTTCAGGAAGTGCCTCTaGCAGCTCCCGCGCTGGCAA +
Preference number: 5 (lower is better)
Translates to: RPWDLSRNLGVKRNSAVPFRKCL*QLPRWQ
Trigger: TTGCCAGCGCGGGAGCTGCAAGAGGCACTTCCTGAA...AGGGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGCTAAGATCCCACGGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp GGAGGCCCTTGGGATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTACCGCCGCCGCCATGTaGGAGGGTGAGGTCACCCCG +
Preference number: 5 (lower is better)
Translates to: GGPWDLQSDECECPTSSPTAAAM*EGEVTP
Trigger: CGGGGTGACCTCACCCTCCAACATGGCGGCGGCGGT...AGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATCCCAAGGGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000337612.9
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS CCA 90 bp TTCCGGAGTCGAGGGGTTGGGATTCTGACCGGCTGGTCGCTGTGTTaGAGGAAGGGCAGGCGATTCCAGGGAAAGAAGCCTTGCTGCATG +
Preference number: 5 (lower is better)
Translates to: FRSRGVGILTGWSLC*RKGRRFQGKKPCCM
Trigger: CATGCAGCAAGGCTTCTTTCCCTGGAATCGCCTGCCCTTCCTCCAACACAGCGACCAGCCGGTCAGAATCCCAACCCCTCGACTCCGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399781.5
ENST00000399782.5
CDS CCA 90 bp CGTTCGGAAGTTCCGTCTCTCAGATCATTTCCGGAGTCGAGGGGTTaGGATTCTGACCGGCTGGTCGCTGTGTTGGAGGAAGGGCAGGCG +
Preference number: 5 (lower is better)
Translates to: RSEVPSLRSFPESRG*DSDRLVAVLEEGQA
Trigger: CGCCTGCCCTTCCTCCAACACAGCGACCAGCCGGTCAGAATCCCAACCCCTCGACTCCGGAAATGATCTGAGAGACGGAACTTCCGAACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399781.5
ENST00000399782.5
CDS-3UTR CAA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGAGTGCCCCAGCCACCTaGCTGAATGATGTACTCTGC +
Preference number: 5 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQSAPAT*LNDVLC
Trigger: GCAGAGTACATCATTCAGCAAGGTGGCTGGGGCACT...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000618481.4
CDS-3UTR CAA 90 bp GGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGGACAGCCCCAACAACAGCAGTATAGACTaGCCCTCAGACAGCGGCATG +
Preference number: 5 (lower is better)
Translates to: GCHWHLVGGAHHTQDSPNNSSID*PSDSGM
Trigger: CATGCCGCTGTCTGAGGGCAAGTCTATACTGCTGTT...GTTGGGGCTGTCCTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp GGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGGACAGCCCCAACCAGAGTTACTTGCAGTaGCACTCACAAGTGGGGACC +
Preference number: 5 (lower is better)
Translates to: GCHWHLVGGAHHTQDSPNQSYLQ*HSQVGT
Trigger: GGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCTG...GTTGGGGCTGTCCTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGGGCTTCGATTGGTGCTaGAATGCGCTCAGCCAATGG +
Preference number: 5 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQGFDWC*NALSQW
Trigger: CCATTGGCTGAGCGCATTCAAGCACCAATCGAAGCC...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp CTTTCTGTGTGCCAACTCTGGCTAGCTGACAGTGACACAGGTAAGCTCTCAGACACCGCCGCCGCCATGTaGGAGGGTGAGGTCACCCCG +
Preference number: 5 (lower is better)
Translates to: LSVCQLWLADSDTGKLSDTAAAM*EGEVTP
Trigger: CGGGGTGACCTCACCCTCCAACATGGCGGCGGCGGT...GTCTGAGAGCTTACCTGTGTCACTGTCAGCTAGCCAGAGTTGGCACACAGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS TCA 90 bp AGTTCCGTCTCTCAGATCATTTCCGGAGTCGAGGGGTTGGGATTCTaGCCGGCTGGTCGCTGTGTTGGAGGAAGGGCAGGCGATTCCAGG +
Preference number: 5 (lower is better)
Translates to: SSVSQIISGVEGLGF*PAGRCVGGRAGDSR
Trigger: CCTGGAATCGCCTGCCCTTCCTCCAACACAGCGACCAGCCGGTCAGAATCCCAACCCCTCGACTCCGGAAATGATCTGAGAGACGGAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399781.5
ENST00000399782.5
CDS-3UTR CAA 90 bp CGCCCGTGGGATCTTAGCAGGAACCTGGGGGTGAAGAGGAACAGTGCAGTCCCTAGTGCCCCAGCCACCTaGCTGAATGATGTACTCTGC +
Preference number: 5 (lower is better)
Translates to: RPWDLSRNLGVKRNSAVPSAPAT*LNDVLC
Trigger: GCAGAGTACATCATTCAGCAAGGTGGCTGGGGCACT...AGGGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGCTAAGATCCCACGGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000618481.4
CDS-3UTR CAA 90 bp GAAATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACGGGGACAGTCTAGACTaGCCCTCAGACGGCGGCACG +
Preference number: 5 (lower is better)
Translates to: EMQVRRGIKNASRGRWVNGDSLD*PSDGGT
Trigger: CGTGCCGCCGTCTGAGGGCAAGTCTAGACTGTCCCC...GTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp CGCCCGTGGGATCTTAGCAGGAACCTGGGGGTGAAGAGGAACAGTGCAGTCCCTGCCTACAAGGCCGTCTaGATGGGTATGATCACCACC +
Preference number: 5 (lower is better)
Translates to: RPWDLSRNLGVKRNSAVPAYKAV*MGMITT
Trigger: GGTGGTGATCATACCCATCAAGACGGCCTTGTAGGC...AGGGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGCTAAGATCCCACGGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp AGAAGTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGACCGCCGCCGCCATGTaGGAGGGTGAGGTCACCCCG +
Preference number: 5 (lower is better)
Translates to: RSPQLSQSVPQMSRQLLETAAAM*EGEVTP
Trigger: CGGGGTGACCTCACCCTCCAACATGGCGGCGGCGGT...CTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGACTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000337612.9
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGCTCTTGCAGCTTCTCTaGAGAGAGGAGTCCCAAGTA +
Preference number: 5 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQLLQLL*REESQV
Trigger: TACTTGGGACTCCTCTCTCAAGAGAAGCTGCAAGAG...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000616863.4
CDS-3UTR CAA 90 bp AGGTGGAGCTGCAGGAAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCAGTGCCCCAGCCACCTaGCTGAATGATGTACTCTGC +
Preference number: 5 (lower is better)
Translates to: RWSCRKLRGLDRLSPEQASAPAT*LNDVLC
Trigger: GCAGAGTACATCATTCAGCAAGGTGGCTGGGGCACT...GGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTCCTGCAGCTCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000618481.4
CDS-3UTR CAA 90 bp AACAGCACTAGTGCCAAGGCTGAGAAACCCGGTCCTGGAGGGGGTGCTTTACCCAGTGCCCCAGCCACCTaGCTGAATGATGTACTCTGC +
Preference number: 5 (lower is better)
Translates to: NSTSAKAEKPGPGGGALPSAPAT*LNDVLC
Trigger: GCAGAGTACATCATTCAGCAAGGTGGCTGGGGCACT...GGGTAAAGCACCCCCTCCAGGACCGGGTTTCTCAGCCTTGGCACTAGTGCTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000618481.4
CDS-3UTR CAA 90 bp TCCATTGCAATCTGCTGCCAGGACTCAGGGCCTAGTGACACTGGCAGGCTTTCTCTCTGGGGGACTGACTaGTCCAGAGTTGTCGCTGGG +
Preference number: 5 (lower is better)
Translates to: SIAICCQDSGPSDTGRLSLWGTD*SRVVAG
Trigger: CCCAGCGACAACTCTGGACAAGTCAGTCCCCCAGAG...AGAAAGCCTGCCAGTGTCACTAGGCCCTGAGTCCTGGCAGCAGATTGCAATGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CAA 90 bp GCCCTCAGACAGCGGCATGGGCTTCATCTCACCGGCGGGGGACAGTCTAGACTTCTTCTTCAGGATCCATaGCAATCTGCTGCCAGGACT +
Preference number: 5 (lower is better)
Translates to: ALRQRHGLHLTGGGQSRLLLQDP*QSAART
Trigger: AGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAG...AAGTCTAGACTGTCCCCCGCCGGTGAGATGAAGCCCATGCCGCTGTCTGAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CAA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGCAAGGCTCTCTTCCCTaGCGTTTATCTCCTTCTCAC +
Preference number: 5 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQQGSLP*RLSPSH
Trigger: GTGAGAAGGAGATAAACGCAAGGGAAGAGAGCCTTG...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGCATGCCACTGCCATGTaGAGCAGAAGTCCCCAATTA +
Preference number: 5 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQHATAM*SRSPQL
Trigger: TAATTGGGGACTTCTGCTCAACATGGCAGTGGCATG...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS CCA 90 bp TCCTTGAAGGTTGGGAAGGAATTCCGGGGAGGGAATATAGCGGGGTaGTGTAGAGAGGTCCTCCTAGGCGAAGGGAACTGGCTGAGCAGA +
Preference number: 5 (lower is better)
Translates to: SLKVGKEFRGGNIAG*CREVLLGEGNWLSR
Trigger: TCTGCTCAGCCAGTTCCCTTCGCCTAGGAGGACCTCTCTACACCACCCCGCTATATTCCCTCCCCGGAATTCCTTCCCAACCTTCAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399781.5
ENST00000399782.5
CDS-3UTR CAA 90 bp GATTCTCAATTTAGCATGAGCGGAGGCCCTTGGGATTTACAGTCAGATGAATGTAGGCGGCGGCGGCAGTaGCTTCCGACAGGGTCCCCC +
Preference number: 5 (lower is better)
Translates to: DSQFSMSGGPWDLQSDECRRRRQ*LPTGSP
Trigger: GGGGGACCCTGTCGGAAGCAACTGCCGCCGCCGCCT...ACATTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp GGAGCTGCAGTAGGAAGCAGTCCTCATGAGGGCTGTTCCCTTCCACTGCTGGAGGAGGACGCCATTGAATaGGCTGGTGAGGCTCCAAAA +
Preference number: 5 (lower is better)
Translates to: GAAVGSSPHEGCSLPLLEEDAIE*AGEAPK
Trigger: TTTTGGAGCCTCACCAGCCAATTCAATGGCGTCCTC...CTCCAGCAGTGGAAGGGAACAGCCCTCATGAGGACTGCTTCCTACTGCAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000616863.4
CDS-3UTR CAA 90 bp CTCCTTCTCACTCAGCAGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCTCTTGCAGCTTCTCTaGAGAGAGGAGTCCCAAGTA +
Preference number: 5 (lower is better)
Translates to: LLLTQQRFCGFQCGDHLLLLQLL*REESQV
Trigger: TACTTGGGACTCCTCTCTCAAGAGAAGCTGCAAGAG...GAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGAGTGAGAAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CAA 90 bp CGCCCGTGGGATCTTAGCAGGAACCTGGGGGTGAAGAGGAACAGTGCAGTCCCTATTGAGCTTTCTGGATaGGCAGGGCTGAACACTGGA +
Preference number: 5 (lower is better)
Translates to: RPWDLSRNLGVKRNSAVPIELSG*AGLNTG
Trigger: TCCAGTGTTCAGCCCTGCCAATCCAGAAAGCTCAAT...AGGGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGCTAAGATCCCACGGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR CAA 90 bp AGGACAGCCCCAACACAGAGAATGGTCAGAACAGCACTAGTGCCAAGGCTGAGACTCTGGGGGACTGACTaGTCCAGAGTTGTCGCTGGG +
Preference number: 5 (lower is better)
Translates to: RTAPTQRMVRTALVPRLRLWGTD*SRVVAG
Trigger: CCCAGCGACAACTCTGGACAAGTCAGTCCCCCAGAG...TCTCAGCCTTGGCACTAGTGCTGTTCTGACCATTCTCTGTGTTGGGGCTGTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp AGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGCTCTGGGGGACTGACTaGTCCAGAGTTGTCGCTGGG +
Preference number: 5 (lower is better)
Translates to: RDIFVCHLWEGVPLASSGLWGTD*SRVVAG
Trigger: CCCAGCGACAACTCTGGACAAGTCAGTCCCCCAGAG...CCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp AAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCCTTCTTCAGGATCCATaGCAATCTGCTGCCAGGACT +
Preference number: 5 (lower is better)
Translates to: KLRGLDRLSPEQALARGILLQDP*QSAART
Trigger: AGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAG...GATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp GAAATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACTTCAGGAAGTGCCTCTaGCAGCTCCCGCGCTGGCAA +
Preference number: 5 (lower is better)
Translates to: EMQVRRGIKNASRGRWVNFRKCL*QLPRWQ
Trigger: TTGCCAGCGCGGGAGCTGCAAGAGGCACTTCCTGAA...GTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp ACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGATTCAGGAAGTGCCTCTaGCAGCTCCCGCGCTGGCAA +
Preference number: 5 (lower is better)
Translates to: TFSFVISGRGCHWHLVGGFRKCL*QLPRWQ
Trigger: TTGCCAGCGCGGGAGCTGCAAGAGGCACTTCCTGAA...TCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp CTCAGAGATGAACCTGGCTTCGATTGGTGCTTGAATGCGCTCAGCCAATGGGTGTTCAGGAAGTGCCTCTaGCAGCTCCCGCGCTGGCAA +
Preference number: 5 (lower is better)
Translates to: LRDEPGFDWCLNALSQWVFRKCL*QLPRWQ
Trigger: TTGCCAGCGCGGGAGCTGCAAGAGGCACTTCCTGAA...CACCCATTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGGTTCATCTCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp CGCCCGTGGGATCTTAGCAGGAACCTGGGGGTGAAGAGGAACAGTGCAGTCCCTCAAGGCTCTCTTCCCTaGCGTTTATCTCCTTCTCAC +
Preference number: 5 (lower is better)
Translates to: RPWDLSRNLGVKRNSAVPQGSLP*RLSPSH
Trigger: GTGAGAAGGAGATAAACGCAAGGGAAGAGAGCCTTG...AGGGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGCTAAGATCCCACGGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp GGGCCTAGTGACACTGGCAGGCTTTCTGTGTGCCAACTCTGGCTAGCTGACAGTGGCTTCGATTGGTGCTaGAATGCGCTCAGCCAATGG +
Preference number: 5 (lower is better)
Translates to: GPSDTGRLSVCQLWLADSGFDWC*NALSQW
Trigger: CCATTGGCTGAGCGCATTCAAGCACCAATCGAAGCC...ACTGTCAGCTAGCCAGAGTTGGCACACAGAAAGCCTGCCAGTGTCACTAGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CAA 90 bp AAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCCTTAGAGGGTATAAGTaGGAGGTGGAAGGAATGGCC +
Preference number: 5 (lower is better)
Translates to: KLRGLDRLSPEQALARGILRGYK*EVEGMA
Trigger: GGCCATTCCTTCCACCTCCAACTTATACCCTCTAAG...GATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp AGCCTCCTATTTCTTTCTCAGAGCCAGGGCTACCCCGATGGCCACTGCCAGGATGCCTACAAGGCCGTCTaGATGGGTATGATCACCACC +
Preference number: 5 (lower is better)
Translates to: SLLFLSQSQGYPDGHCQDAYKAV*MGMITT
Trigger: GGTGGTGATCATACCCATCAAGACGGCCTTGTAGGC...ATCCTGGCAGTGGCCATCGGGGTAGCCCTGGCTCTGAGAAAGAAATAGGAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337612.9
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CAA 90 bp GATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACACCGCCGCCGCCATGTaGGAGGGTGAGGTCACCCCG +
Preference number: 5 (lower is better)
Translates to: DLQSDECECPTSSPNMPNTAAAM*EGEVTP
Trigger: CGGGGTGACCTCACCCTCCAACATGGCGGCGGCGGT...GTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000337612.9
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp GGCACAGTGGTGGGCACCTATAGTCCCAGCCTGTGCTCTTGGCTATTCAGGACCCTCTTGCAGCTTCTCTaGAGAGAGGAGTCCCAAGTA +
Preference number: 5 (lower is better)
Translates to: GTVVGTYSPSLCSWLFRTLLQLL*REESQV
Trigger: TACTTGGGACTCCTCTCTCAAGAGAAGCTGCAAGAG...GGTCCTGAATAGCCAAGAGCACAGGCTGGGACTATAGGTGCCCACCACTGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS-3UTR CAA 90 bp AACAGCACTAGTGCCAAGGCTGAGAAACCCGGTCCTGGAGGGGGTGCTTTACCCATTGAGCTTTCTGGATaGGCAGGGCTGAACACTGGA +
Preference number: 5 (lower is better)
Translates to: NSTSAKAEKPGPGGGALPIELSG*AGLNTG
Trigger: TCCAGTGTTCAGCCCTGCCAATCCAGAAAGCTCAAT...GGGTAAAGCACCCCCTCCAGGACCGGGTTTCTCAGCCTTGGCACTAGTGCTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR CAA 90 bp GGCACAGTGGTGGGCACCTATAGTCCCAGCCTGTGCTCTTGGCTATTCAGGACCATTGAGCTTTCTGGATaGGCAGGGCTGAACACTGGA +
Preference number: 5 (lower is better)
Translates to: GTVVGTYSPSLCSWLFRTIELSG*AGLNTG
Trigger: TCCAGTGTTCAGCCCTGCCAATCCAGAAAGCTCAAT...GGTCCTGAATAGCCAAGAGCACAGGCTGGGACTATAGGTGCCCACCACTGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS-3UTR CAA 90 bp CTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCTTACAAGGCTCTCTTCCCTaGCGTTTATCTCCTTCTCAC +
Preference number: 5 (lower is better)
Translates to: LRGLDRLSPEQALARGILQGSLP*RLSPSH
Trigger: GTGAGAAGGAGATAAACGCAAGGGAAGAGAGCCTTG...TAAGATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp TGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACGGGGACAGTCTAGACTaGCCCTCAGACGGCGGCACG +
Preference number: 5 (lower is better)
Translates to: CPDSCWRFKFQPIQLQPYGDSLD*PSDGGT
Trigger: CGTGCCGCCGTCTGAGGGCAAGTCTAGACTGTCCCC...GTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp TCTGTTAGCAATCAGATAGCCTACAAGGCCGTCTTGATGGGTATGATCACCACCGGGGACAGTCTAGACTaGCCCTCAGACGGCGGCACG +
Preference number: 5 (lower is better)
Translates to: SVSNQIAYKAVLMGMITTGDSLD*PSDGGT
Trigger: CGTGCCGCCGTCTGAGGGCAAGTCTAGACTGTCCCC...GGTGGTGATCATACCCATCAAGACGGCCTTGTAGGCTATCTGATTGCTAACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp AGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTTCACAGAGTTACTTGCAGTaGCACTCACAAGTGGGGACC +
Preference number: 5 (lower is better)
Translates to: SVSVGSSAGTTSSTSVGSQSYLQ*HSQVGT
Trigger: GGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCTG...TGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CAA 90 bp CAGCAGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTCTAGCCAGAGTTACTaGCAGTTGCACTCACAAGTG +
Preference number: 5 (lower is better)
Translates to: QQRFCGFQCGDHLLHFSRSSQSY*QLHSQV
Trigger: CACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAGA...CCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CAA 90 bp CTCTCTAGCCAGAGTTACTTGCAGTTGCACTCACAAGTGGGGACCCCAGGTCTCGGCTTCGATTGGTGCTaGAATGCGCTCAGCCAATGG +
Preference number: 5 (lower is better)
Translates to: LSSQSYLQLHSQVGTPGLGFDWC*NALSQW
Trigger: CCATTGGCTGAGCGCATTCAAGCACCAATCGAAGCC...GAGACCTGGGGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp CTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCTTACTTAGAGGGTATAAGTaGGAGGTGGAAGGAATGGCC +
Preference number: 5 (lower is better)
Translates to: LRGLDRLSPEQALARGILLRGYK*EVEGMA
Trigger: GGCCATTCCTTCCACCTCCAACTTATACCCTCTAAG...TAAGATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp GTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGCAGGACCGCCGCCGCCATGTaGGAGGGTGAGGTCACCCCG +
Preference number: 5 (lower is better)
Translates to: VHISKIPKGSIFTRWSCRTAAAM*EGEVTP
Trigger: CGGGGTGACCTCACCCTCCAACATGGCGGCGGCGGT...CCTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000337612.9
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp AACAGCACTAGTGCCAAGGCTGAGAAACCCGGTCCTGGAGGGGGTGCTTTACCCCCAGAGGCACCAAAATaGGCTCAGGAGCATTTGCAA +
Preference number: 5 (lower is better)
Translates to: NSTSAKAEKPGPGGGALPPEAPK*AQEHLQ
Trigger: TTGCAAATGCTCCTGAGCCAATTTTGGTGCCTCTGG...GGGTAAAGCACCCCCTCCAGGACCGGGTTTCTCAGCCTTGGCACTAGTGCTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000399777.1
ENST00000418951.6
CDS CCA 90 bp TACACAGTCACGACAGCCTCGATGTTCGCCACTAGTTGGGGCAGATaGTCCTTGAAGGTTGGGAAGGAATTCCGGGGAGGGAATATAGCG +
Preference number: 5 (lower is better)
Translates to: YTVTTASMFATSWGR*SLKVGKEFRGGNIA
Trigger: CGCTATATTCCCTCCCCGGAATTCCTTCCCAACCTTCAAGGACCATCTGCCCCAACTAGTGGCGAACATCGAGGCTGTCGTGACTGTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399781.5
ENST00000399782.5
CDS-3UTR CAA 90 bp ATCATGATAGTAGGCTATAACTCAAGTTTCAATGCCACGATGGTCGTGCTTTCTAGGCGGCGGCGGCAGTaGCTTCCGACAGGGTCCCCC +
Preference number: 5 (lower is better)
Translates to: IMIVGYNSSFNATMVVLSRRRRQ*LPTGSP
Trigger: GGGGGACCCTGTCGGAAGCAACTGCCGCCGCCGCCT...AGAAAGCACGACCATCGTGGCATTGAAACTTGAGTTATAGCCTACTATCATGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS-3UTR CAA 90 bp CTCTCTAGCCAGAGTTACTTGCAGTTGCACTCACAAGTGGGGACCCCAGGTCTCGAGGACGCCATTGAATaGGCTGGTGAGGCTCCAAAA +
Preference number: 5 (lower is better)
Translates to: LSSQSYLQLHSQVGTPGLEDAIE*AGEAPK
Trigger: TTTTGGAGCCTCACCAGCCAATTCAATGGCGTCCTC...GAGACCTGGGGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000616863.4
CDS-3UTR CAA 90 bp GGCACAGTGGTGGGCACCTATAGTCCCAGCCTGTGCTCTTGGCTATTCAGGACCGGAAAGATGTTGCTCTaGCAGCTTCTCTTGAGAGAG +
Preference number: 5 (lower is better)
Translates to: GTVVGTYSPSLCSWLFRTGKMLL*QLLLRE
Trigger: CTCTCTCAAGAGAAGCTGCAAGAGCAACATCTTTCC...GGTCCTGAATAGCCAAGAGCACAGGCTGGGACTATAGGTGCCCACCACTGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS-3UTR CAA 90 bp AGAACAGCACTAGTGCCAAGGCTGAGAAACCCGGTCCTGGAGGGGGTGCTTTACATTGAGCTTTCTGGATaGGCAGGGCTGAACACTGGA +
Preference number: 5 (lower is better)
Translates to: RTALVPRLRNPVLEGVLYIELSG*AGLNTG
Trigger: TCCAGTGTTCAGCCCTGCCAATCCAGAAAGCTCAAT...GTAAAGCACCCCCTCCAGGACCGGGTTTCTCAGCCTTGGCACTAGTGCTGTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR CAA 90 bp TGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGCTCTGGGGGACTGACTaGTCCAGAGTTGTCGCTGGG +
Preference number: 5 (lower is better)
Translates to: CHILLTQELTKSYQRKPMLWGTD*SRVVAG
Trigger: CCCAGCGACAACTCTGGACAAGTCAGTCCCCCAGAG...CATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp CAATGTCTAGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTCTGGGGGACTGACTaGTCCAGAGTTGTCGCTGGG +
Preference number: 5 (lower is better)
Translates to: QCLETFSFVISGRGCHWHLWGTD*SRVVAG
Trigger: CCCAGCGACAACTCTGGACAAGTCAGTCCCCCAGAG...ATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCTAGACATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp AGAAGTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGTTCAGGAAGTGCCTCTaGCAGCTCCCGCGCTGGCAA +
Preference number: 5 (lower is better)
Translates to: RSPQLSQSVPQMSRQLLEFRKCL*QLPRWQ
Trigger: TTGCCAGCGCGGGAGCTGCAAGAGGCACTTCCTGAA...CTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGACTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp TGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGTTCAGGAAGTGCCTCTaGCAGCTCCCGCGCTGGCAA +
Preference number: 5 (lower is better)
Translates to: CHILLTQELTKSYQRKPMFRKCL*QLPRWQ
Trigger: TTGCCAGCGCGGGAGCTGCAAGAGGCACTTCCTGAA...CATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp AGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTTCACAAGGCTCTCTTCCCTaGCGTTTATCTCCTTCTCAC +
Preference number: 5 (lower is better)
Translates to: SVSVGSSAGTTSSTSVGSQGSLP*RLSPSH
Trigger: GTGAGAAGGAGATAAACGCAAGGGAAGAGAGCCTTG...TGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CAA 90 bp AAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTGGGGACAGTCTAGACTaGCCCTCAGACGGCGGCACG +
Preference number: 5 (lower is better)
Translates to: KCPDSCWRFKFQPIQLQPGDSLD*PSDGGT
Trigger: CGTGCCGCCGTCTGAGGGCAAGTCTAGACTGTCCCC...AGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp TCCATTGCAATCTGCTGCCAGGACTCAGGGCCTAGTGACACTGGCAGGCTTTCTCAGAGTTACTTGCAGTaGCACTCACAAGTGGGGACC +
Preference number: 5 (lower is better)
Translates to: SIAICCQDSGPSDTGRLSQSYLQ*HSQVGT
Trigger: GGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCTG...AGAAAGCCTGCCAGTGTCACTAGGCCCTGAGTCCTGGCAGCAGATTGCAATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CAA 90 bp GTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATGTTGAGGGCTTCGATTGGTGCTaGAATGCGCTCAGCCAATGG +
Preference number: 5 (lower is better)
Translates to: VNAPPQALTCLTCHCHVEGFDWC*NALSQW
Trigger: CCATTGGCTGAGCGCATTCAAGCACCAATCGAAGCC...CTCAACATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp CTCAGAGATGAACCTGGCTTCGATTGGTGCTTGAATGCGCTCAGCCAATGGGTGGGCTTCGATTGGTGCTaGAATGCGCTCAGCCAATGG +
Preference number: 5 (lower is better)
Translates to: LRDEPGFDWCLNALSQWVGFDWC*NALSQW
Trigger: CCATTGGCTGAGCGCATTCAAGCACCAATCGAAGCC...CACCCATTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGGTTCATCTCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp ACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCTACAAGGCCGTCTaGATGGGTATGATCACCACC +
Preference number: 5 (lower is better)
Translates to: TFSFVISGRGCHWHLVGGAYKAV*MGMITT
Trigger: GGTGGTGATCATACCCATCAAGACGGCCTTGTAGGC...TCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp AGGACAGCCCCAACACAGAGAATGGTCAGAACAGCACTAGTGCCAAGGCTGAGAGCCTACAAGGCCGTCTaGATGGGTATGATCACCACC +
Preference number: 5 (lower is better)
Translates to: RTAPTQRMVRTALVPRLRAYKAV*MGMITT
Trigger: GGTGGTGATCATACCCATCAAGACGGCCTTGTAGGC...TCTCAGCCTTGGCACTAGTGCTGTTCTGACCATTCTCTGTGTTGGGGCTGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp AGGTGGAGCTGCAGGAAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCTTGGCTCAGGAGCATTaGCAATGCTTTATGGAGAGG +
Preference number: 5 (lower is better)
Translates to: RWSCRKLRGLDRLSPEQALAQEH*QCFMER
Trigger: CCTCTCCATAAAGCATTGCAAATGCTCCTGAGCCAA...GGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTCCTGCAGCTCCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399777.1
ENST00000418951.6
CDS CCA 90 bp ATAAGTATCTACACAGTCACGACAGCCTCGATGTTCGCCACTAGTTaGGGCAGATGGTCCTTGAAGGTTGGGAAGGAATTCCGGGGAGGG +
Preference number: 5 (lower is better)
Translates to: ISIYTVTTASMFATS*GRWSLKVGKEFRGG
Trigger: CCCTCCCCGGAATTCCTTCCCAACCTTCAAGGACCATCTGCCCCAACTAGTGGCGAACATCGAGGCTGTCGTGACTGTGTAGATACTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399781.5
ENST00000399782.5
CDS-3UTR CAA 90 bp AAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACACACAAACATAGGCGGCGGCGGCAGTaGCTTCCGACAGGGTCCCCC +
Preference number: 5 (lower is better)
Translates to: KTQNKDTLQDKAGKTHKHRRRRQ*LPTGSP
Trigger: GGGGGACCCTGTCGGAAGCAACTGCCGCCGCCGCCT...ATGTTTGTGTGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp AGGACAGCCCCAACACAGAGAATGGTCAGAACAGCACTAGTGCCAAGGCTGAGAGAGGACGCCATTGAATaGGCTGGTGAGGCTCCAAAA +
Preference number: 5 (lower is better)
Translates to: RTAPTQRMVRTALVPRLREDAIE*AGEAPK
Trigger: TTTTGGAGCCTCACCAGCCAATTCAATGGCGTCCTC...TCTCAGCCTTGGCACTAGTGCTGTTCTGACCATTCTCTGTGTTGGGGCTGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000616863.4
CDS-3UTR CAA 90 bp GGAGGCCCTTGGGATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTGAGGACGCCATTGAATaGGCTGGTGAGGCTCCAAAA +
Preference number: 5 (lower is better)
Translates to: GGPWDLQSDECECPTSSPEDAIE*AGEAPK
Trigger: TTTTGGAGCCTCACCAGCCAATTCAATGGCGTCCTC...AGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATCCCAAGGGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000616863.4
CDS-3UTR CAA 90 bp CAGGATGGCAACAGCAGCAGCCCCTCCAAACAGCAGTATAGACTTGCCCTCAGACTCTTGCAGCTTCTCTaGAGAGAGGAGTCCCAAGTA +
Preference number: 5 (lower is better)
Translates to: QDGNSSSPSKQQYRLALRLLQLL*REESQV
Trigger: TACTTGGGACTCCTCTCTCAAGAGAAGCTGCAAGAG...TCTGAGGGCAAGTCTATACTGCTGTTTGGAGGGGCTGCTGCTGTTGCCATCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CAA 90 bp CTCTCTAGCCAGAGTTACTTGCAGTTGCACTCACAAGTGGGGACCCCAGGTCTCCTCTTGCAGCTTCTCTaGAGAGAGGAGTCCCAAGTA +
Preference number: 5 (lower is better)
Translates to: LSSQSYLQLHSQVGTPGLLLQLL*REESQV
Trigger: TACTTGGGACTCCTCTCTCAAGAGAAGCTGCAAGAG...GAGACCTGGGGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000616863.4
CDS-3UTR CAA 90 bp GTGTCTGTTAGCAATCAGATAGCCTACAAGGCCGTCTTGATGGGTATGATCACCCTCTGGGGGACTGACTaGTCCAGAGTTGTCGCTGGG +
Preference number: 5 (lower is better)
Translates to: VSVSNQIAYKAVLMGMITLWGTD*SRVVAG
Trigger: CCCAGCGACAACTCTGGACAAGTCAGTCCCCCAGAG...GGTGATCATACCCATCAAGACGGCCTTGTAGGCTATCTGATTGCTAACAGACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp AAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCTCAGAATTAGAGGAGTaGTTCTCACTCTTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: KLRGLDRLSPEQALARGISELEE*FSLFSP
Trigger: TGGAGAGAAGAGTGAGAACAACTCCTCTAATTCTGA...GATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp TCTGTTAGCAATCAGATAGCCTACAAGGCCGTCTTGATGGGTATGATCACCACCTTCAGGAAGTGCCTCTaGCAGCTCCCGCGCTGGCAA +
Preference number: 5 (lower is better)
Translates to: SVSNQIAYKAVLMGMITTFRKCL*QLPRWQ
Trigger: TTGCCAGCGCGGGAGCTGCAAGAGGCACTTCCTGAA...GGTGGTGATCATACCCATCAAGACGGCCTTGTAGGCTATCTGATTGCTAACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp GCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTGGGGACAGTCTAGACTaGCCCTCAGACGGCGGCACG +
Preference number: 5 (lower is better)
Translates to: AGGSNSSQYNSNLTSFCLGDSLD*PSDGGT
Trigger: CGTGCCGCCGTCTGAGGGCAAGTCTAGACTGTCCCC...AAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp GAAATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACAACAGCAGTATAGACTaGCCCTCAGACAGCGGCATG +
Preference number: 5 (lower is better)
Translates to: EMQVRRGIKNASRGRWVNNSSID*PSDSGM
Trigger: CATGCCGCTGTCTGAGGGCAAGTCTATACTGCTGTT...GTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp CAACTCTGGCTAGCTGACAGTGACACAGGTAAGCTCTCAGACTGCCAGGAAGTGCAGAGTTACTTGCAGTaGCACTCACAAGTGGGGACC +
Preference number: 5 (lower is better)
Translates to: QLWLADSDTGKLSDCQEVQSYLQ*HSQVGT
Trigger: GGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCTG...CACTTCCTGGCAGTCTGAGAGCTTACCTGTGTCACTGTCAGCTAGCCAGAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CAA 90 bp AGGACAGCCCCAACACAGAGAATGGTCAGAACAGCACTAGTGCCAAGGCTGAGACAGAGTTACTTGCAGTaGCACTCACAAGTGGGGACC +
Preference number: 5 (lower is better)
Translates to: RTAPTQRMVRTALVPRLRQSYLQ*HSQVGT
Trigger: GGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCTG...TCTCAGCCTTGGCACTAGTGCTGTTCTGACCATTCTCTGTGTTGGGGCTGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp GGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGGACAGCCCCAACTTAAAACATCAGGTTTaGGTGATCAGGGTAGGTAAA +
Preference number: 5 (lower is better)
Translates to: GCHWHLVGGAHHTQDSPNLKHQV*VIRVGK
Trigger: TTTACCTACCCTGATCACCAAAACCTGATGTTTTAA...GTTGGGGCTGTCCTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp TGGGTGAACCAGAAGGTCAACAGTTGCATTTCTTCATCTAGAATGTTCTCTAGAACCGCCGCCGCCATGTaGGAGGGTGAGGTCACCCCG +
Preference number: 5 (lower is better)
Translates to: WVNQKVNSCISSSRMFSRTAAAM*EGEVTP
Trigger: CGGGGTGACCTCACCCTCCAACATGGCGGCGGCGGT...TCTAGAGAACATTCTAGATGAAGAAATGCAACTGTTGACCTTCTGGTTCACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp AGTTGTTGCTGCTTTCACCTCTTCTTCATCAAGTTCTACAAACAGAGATGTAGCACCGCCGCCGCCATGTaGGAGGGTGAGGTCACCCCG +
Preference number: 5 (lower is better)
Translates to: SCCCFHLFFIKFYKQRCSTAAAM*EGEVTP
Trigger: CGGGGTGACCTCACCCTCCAACATGGCGGCGGCGGT...GCTACATCTCTGTTTGTAGAACTTGATGAAGAAGAGGTGAAAGCAGCAACAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CAA 90 bp AGGACAGCCCCAACACAGAGAATGGTCAGAACAGCACTAGTGCCAAGGCTGAGACTCTTGCAGCTTCTCTaGAGAGAGGAGTCCCAAGTA +
Preference number: 5 (lower is better)
Translates to: RTAPTQRMVRTALVPRLRLLQLL*REESQV
Trigger: TACTTGGGACTCCTCTCTCAAGAGAAGCTGCAAGAG...TCTCAGCCTTGGCACTAGTGCTGTTCTGACCATTCTCTGTGTTGGGGCTGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000616863.4
CDS-3UTR CAA 90 bp TCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTTCAGTTGTTGGAAAGATGTTGCTCTaGCAGCTTCTCTTGAGAGAG +
Preference number: 5 (lower is better)
Translates to: SVGSSAGTTSSTSVGSVVGKMLL*QLLLRE
Trigger: CTCTCTCAAGAGAAGCTGCAAGAGCAACATCTTTCC...AACAACTGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CAA 90 bp CAGGATGGCAACAGCAGCAGCCCCTCCAAACAGCAGTATAGACTTGCCCTCAGAGGAAAGATGTTGCTCTaGCAGCTTCTCTTGAGAGAG +
Preference number: 5 (lower is better)
Translates to: QDGNSSSPSKQQYRLALRGKMLL*QLLLRE
Trigger: CTCTCTCAAGAGAAGCTGCAAGAGCAACATCTTTCC...TCTGAGGGCAAGTCTATACTGCTGTTTGGAGGGGCTGCTGCTGTTGCCATCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CAA 90 bp GGAGGCCCTTGGGATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTATTGAGCTTTCTGGATaGGCAGGGCTGAACACTGGA +
Preference number: 5 (lower is better)
Translates to: GGPWDLQSDECECPTSSPIELSG*AGLNTG
Trigger: TCCAGTGTTCAGCCCTGCCAATCCAGAAAGCTCAAT...AGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATCCCAAGGGCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR CAA 90 bp TCCACAAGGCTCTCTTCCCTTGCGTTTATCTCCTTCTCACTCAGCAGCGTTTCTAGTGCCCCAGCCACCTaGCTGAATGATGTACTCTGC +
Preference number: 5 (lower is better)
Translates to: STRLSSLAFISFSLSSVSSAPAT*LNDVLC
Trigger: GCAGAGTACATCATTCAGCAAGGTGGCTGGGGCACT...AGAAACGCTGCTGAGTGAGAAGGAGATAAACGCAAGGGAAGAGAGCCTTGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
CDS-3UTR CAA 90 bp TCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGAGTGCCCCAGCCACCTaGCTGAATGATGTACTCTGC +
Preference number: 5 (lower is better)
Translates to: SDECECPTSSPNMPNMPLSAPAT*LNDVLC
Trigger: GCAGAGTACATCATTCAGCAAGGTGGCTGGGGCACT...CAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000618481.4
CDS-3UTR CAA 90 bp AGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTCTCTGGGGGACTGACTaGTCCAGAGTTGTCGCTGGG +
Preference number: 5 (lower is better)
Translates to: RQLLEVQIPANTTPTLHPLWGTD*SRVVAG
Trigger: CCCAGCGACAACTCTGGACAAGTCAGTCCCCCAGAG...AGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp AATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCACTTCTTCAGGATCCATaGCAATCTGCTGCCAGGACT +
Preference number: 5 (lower is better)
Translates to: NAGEKGYQECLEGEMGEPLLQDP*QSAART
Trigger: AGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAG...TGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp CTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCTTATCAGAATTAGAGGAGTaGTTCTCACTCTTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: LRGLDRLSPEQALARGILSELEE*FSLFSP
Trigger: TGGAGAGAAGAGTGAGAACAACTCCTCTAATTCTGA...TAAGATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp AGGAGTTGTTCTCACTCTTCTCTCCAGCTCCGTTGCTGTCTAAGCTTTTCACTTTTCAGGAAGTGCCTCTaGCAGCTCCCGCGCTGGCAA +
Preference number: 5 (lower is better)
Translates to: RSCSHSSLQLRCCLSFSLFRKCL*QLPRWQ
Trigger: TTGCCAGCGCGGGAGCTGCAAGAGGCACTTCCTGAA...AAGTGAAAAGCTTAGACAGCAACGGAGCTGGAGAGAAGAGTGAGAACAACTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CAA 90 bp GTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATGTTGAGCAAGGCTCTCTTCCCTaGCGTTTATCTCCTTCTCAC +
Preference number: 5 (lower is better)
Translates to: VNAPPQALTCLTCHCHVEQGSLP*RLSPSH
Trigger: GTGAGAAGGAGATAAACGCAAGGGAAGAGAGCCTTG...CTCAACATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp CAGGGATGCTGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGACATGCCACTGCCATGTaGAGCAGAAGTCCCCAATTA +
Preference number: 5 (lower is better)
Translates to: QGCCHILLTQELTKSYQRHATAM*SRSPQL
Trigger: TAATTGGGGACTTCTGCTCAACATGGCAGTGGCATG...TCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCAGCATCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp GTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATGTTGAGCATGCCACTGCCATGTaGAGCAGAAGTCCCCAATTA +
Preference number: 5 (lower is better)
Translates to: VNAPPQALTCLTCHCHVEHATAM*SRSPQL
Trigger: TAATTGGGGACTTCTGCTCAACATGGCAGTGGCATG...CTCAACATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGCTGATTAGGACTATTTaGGTTTATTACCCTGGCATT +
Preference number: 5 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQLIRTI*VYYPGI
Trigger: AATGCCAGGGTAATAAACCAAAATAGTCCTAATCAG...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp CAGAAGTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGCTTCGATTGGTGCTaGAATGCGCTCAGCCAATGG +
Preference number: 5 (lower is better)
Translates to: QKSPIIPECSTNVQTAAGGFDWC*NALSQW
Trigger: CCATTGGCTGAGCGCATTCAAGCACCAATCGAAGCC...TCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGACTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp TCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCAGGCTTCGATTGGTGCTaGAATGCGCTCAGCCAATGG +
Preference number: 5 (lower is better)
Translates to: SPIIPECSTNVQTAAGGSGFDWC*NALSQW
Trigger: CCATTGGCTGAGCGCATTCAAGCACCAATCGAAGCC...TGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp GGAGGCCCTTGGGATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTCTTAGAGGGTATAAGTaGGAGGTGGAAGGAATGGCC +
Preference number: 5 (lower is better)
Translates to: GGPWDLQSDECECPTSSPLRGYK*EVEGMA
Trigger: GGCCATTCCTTCCACCTCCAACTTATACCCTCTAAG...AGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATCCCAAGGGCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp ACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGACTTAGAGGGTATAAGTaGGAGGTGGAAGGAATGGCC +
Preference number: 5 (lower is better)
Translates to: TFSFVISGRGCHWHLVGGLRGYK*EVEGMA
Trigger: GGCCATTCCTTCCACCTCCAACTTATACCCTCTAAG...TCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp GGAGCTGCAGTAGGAAGCAGTCCTCATGAGGGCTGTTCCCTTCCACTGCTGGAGCTTACTGTCATATTATaGAGGGAATCAGCGCAAAGC +
Preference number: 5 (lower is better)
Translates to: GAAVGSSPHEGCSLPLLELTVIL*RESAQS
Trigger: GCTTTGCGCTGATTCCCTCAATAATATGACAGTAAG...CTCCAGCAGTGGAAGGGAACAGCCCTCATGAGGACTGCTTCCTACTGCAGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp CCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGGAGCCTACAAGGCCGTCTaGATGGGTATGATCACCACC +
Preference number: 5 (lower is better)
Translates to: PHPVNSGADQELPEKANGAYKAV*MGMITT
Trigger: GGTGGTGATCATACCCATCAAGACGGCCTTGTAGGC...TCCATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp TTTCTCTGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGACCGCCGCCGCCATGTaGGAGGGTGAGGTCACCCCG +
Preference number: 5 (lower is better)
Translates to: FLCVHISKIPKGSIFTRWTAAAM*EGEVTP
Trigger: CGGGGTGACCTCACCCTCCAACATGGCGGCGGCGGT...CCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACAGAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000337612.9
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp AATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCACCAGAGGCACCAAAATaGGCTCAGGAGCATTTGCAA +
Preference number: 5 (lower is better)
Translates to: NAGEKGYQECLEGEMGEPPEAPK*AQEHLQ
Trigger: TTGCAAATGCTCCTGAGCCAATTTTGGTGCCTCTGG...TGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000418951.6
CDS TCA 90 bp TTCCTGGGACACTTTTTCTCCAAGATGGGCCAAGCAGTCTTCCATTaGGCTTTCTGGATTGGCAGGGCTGAACACTGGAGAAGTGTGACG +
Preference number: 5 (lower is better)
Translates to: FLGHFFSKMGQAVFH*AFWIGRAEHWRSVT
Trigger: CGTCACACTTCTCCAGTGTTCAGCCCTGCCAATCCAGAAAGCTCAATGGAAGACTGCTTGGCCCATCTTGGAGAAAAAGTGTCCCAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000399782.5
ENST00000418951.6
ENST00000464649.1
ENST00000493680.5
ENST00000611738.4
ENST00000618481.4
CDS TCA 90 bp GTCATTGCTATCTTCTGCAGTGATTCCAGGGTATTCCTCCTCCTCTaGCTCAAGACTAAACACAGTGCCCACAGTGGACTTGCTCTGCCC +
Preference number: 5 (lower is better)
Translates to: VIAIFCSDSRVFLLL*LKTKHSAHSGLALP
Trigger: GGGCAGAGCAAGTCCACTGTGGGCACTGTGTTTAGTCTTGAGTCAGAGGAGGAGGAATACCCTGGAATCACTGCAGAAGATAGCAATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485631.1
CDS-3UTR CAA 90 bp CAATGTCTAGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATGAGGACGCCATTGAATaGGCTGGTGAGGCTCCAAAA +
Preference number: 5 (lower is better)
Translates to: QCLETFSFVISGRGCHWHEDAIE*AGEAPK
Trigger: TTTTGGAGCCTCACCAGCCAATTCAATGGCGTCCTC...ATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCTAGACATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000616863.4
CDS-3UTR CAA 90 bp AGGTGGAGCTGCAGGAAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCGTTCTTGACCACGTCTaGTCAATTCCAAAAGCATTT +
Preference number: 5 (lower is better)
Translates to: RWSCRKLRGLDRLSPEQAVLDHV*SIPKAF
Trigger: AAATGCTTTTGGAATTGACAAGACGTGGTCAAGAAC...GGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTCCTGCAGCTCCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000618481.4
CDS-3UTR CAA 90 bp GGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTTCAGTTGTTGCTGCTTCAGAATTAGAGGAGTaGTTCTCACTCTTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: GSSAGTTSSTSVGSVVAASELEE*FSLFSP
Trigger: TGGAGAGAAGAGTGAGAACAACTCCTCTAATTCTGA...AGCAGCAACAACTGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CAA 90 bp AGAAGTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGAACAGCAGTATAGACTaGCCCTCAGACAGCGGCATG +
Preference number: 5 (lower is better)
Translates to: RSPQLSQSVPQMSRQLLENSSID*PSDSGM
Trigger: CATGCCGCTGTCTGAGGGCAAGTCTATACTGCTGTT...CTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGACTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp CAGAAGTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAAACAGCAGTATAGACTaGCCCTCAGACAGCGGCATG +
Preference number: 5 (lower is better)
Translates to: QKSPIIPECSTNVQTAAGNSSID*PSDSGM
Trigger: CATGCCGCTGTCTGAGGGCAAGTCTATACTGCTGTT...TCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGACTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp TCCACAAGGCTCTCTTCCCTTGCGTTTATCTCCTTCTCACTCAGCAGCGTTTCTAACAGCAGTATAGACTaGCCCTCAGACAGCGGCATG +
Preference number: 5 (lower is better)
Translates to: STRLSSLAFISFSLSSVSNSSID*PSDSGM
Trigger: CATGCCGCTGTCTGAGGGCAAGTCTATACTGCTGTT...AGAAACGCTGCTGAGTGAGAAGGAGATAAACGCAAGGGAAGAGAGCCTTGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CAA 90 bp AGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACAACAGCAGTATAGACTaGCCCTCAGACAGCGGCATG +
Preference number: 5 (lower is better)
Translates to: SQMNVNAPPQALTCLTCHNSSID*PSDSGM
Trigger: CATGCCGCTGTCTGAGGGCAAGTCTATACTGCTGTT...GTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp ACTTCTTCAGGATCCATTGCAATCTGCTGCCAGGACTCAGGGCCTAGTGACACTCATGCCACTGCCATGTaGAGCAGAAGTCCCCAATTA +
Preference number: 5 (lower is better)
Translates to: TSSGSIAICCQDSGPSDTHATAM*SRSPQL
Trigger: TAATTGGGGACTTCTGCTCAACATGGCAGTGGCATG...AGTGTCACTAGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CAA 90 bp AGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACCAGAGTTACTTGCAGTaGCACTCACAAGTGGGGACC +
Preference number: 5 (lower is better)
Translates to: SQMNVNAPPQALTCLTCHQSYLQ*HSQVGT
Trigger: GGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCTG...GTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp CCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGGACAGAGTTACTTGCAGTaGCACTCACAAGTGGGGACC +
Preference number: 5 (lower is better)
Translates to: PHPVNSGADQELPEKANGQSYLQ*HSQVGT
Trigger: GGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCTG...TCCATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp CAGAAGTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGACAGAGTTACTTGCAGTaGCACTCACAAGTGGGGACC +
Preference number: 5 (lower is better)
Translates to: QKSPIIPECSTNVQTAAGQSYLQ*HSQVGT
Trigger: GGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCTG...TCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGACTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp CGCCCGTGGGATCTTAGCAGGAACCTGGGGGTGAAGAGGAACAGTGCAGTCCCTCTGATTAGGACTATTTaGGTTTATTACCCTGGCATT +
Preference number: 5 (lower is better)
Translates to: RPWDLSRNLGVKRNSAVPLIRTI*VYYPGI
Trigger: AATGCCAGGGTAATAAACCAAAATAGTCCTAATCAG...AGGGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGCTAAGATCCCACGGGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp AGGTGGAGCTGCAGGAAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCAGGCAAGGAGACTACTaGCCTTACTGTCATATTATT +
Preference number: 5 (lower is better)
Translates to: RWSCRKLRGLDRLSPEQARQGDY*PYCHII
Trigger: AATAATATGACAGTAAGGCAAGTAGTCTCCTTGCCT...GGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTCCTGCAGCTCCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp AGGACAGCCCCAACACAGAGAATGGTCAGAACAGCACTAGTGCCAAGGCTGAGATTGGCTCAGGAGCATTaGCAATGCTTTATGGAGAGG +
Preference number: 5 (lower is better)
Translates to: RTAPTQRMVRTALVPRLRLAQEH*QCFMER
Trigger: CCTCTCCATAAAGCATTGCAAATGCTCCTGAGCCAA...TCTCAGCCTTGGCACTAGTGCTGTTCTGACCATTCTCTGTGTTGGGGCTGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399777.1
ENST00000418951.6
CDS TCA 90 bp GTCATTGCTATCTTCTGCAGTGATTCCAGGGTATTCCTCCTCCTCTaGCTCAAGACTAAACACAGTGCCCTTATTCCAGCCGCTGGCATG +
Preference number: 5 (lower is better)
Translates to: VIAIFCSDSRVFLLL*LKTKHSALIPAAGM
Trigger: CATGCCAGCGGCTGGAATAAGGGCACTGTGTTTAGTCTTGAGTCAGAGGAGGAGGAATACCCTGGAATCACTGCAGAAGATAGCAATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611738.4
CDS CCA 90 bp TTATGGAGAGGCTCTTTCAGTTCCTGGGACACTTTTTCTCCAAGATaGGCCAAGCAGTCTTCCATTGAGCTTTCTGGATTGGCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: LWRGSFSSWDTFSPR*AKQSSIELSGLAGL
Trigger: CAGCCCTGCCAATCCAGAAAGCTCAATGGAAGACTGCTTGGCCCATCTTGGAGAAAAAGTGTCCCAGGAACTGAAAGAGCCTCTCCATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000399782.5
ENST00000418951.6
ENST00000464649.1
ENST00000493680.5
ENST00000611738.4
ENST00000618481.4
CDS-3UTR CAA 90 bp TGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACGAGGACGCCATTGAATaGGCTGGTGAGGCTCCAAAA +
Preference number: 5 (lower is better)
Translates to: CPDSCWRFKFQPIQLQPYEDAIE*AGEAPK
Trigger: TTTTGGAGCCTCACCAGCCAATTCAATGGCGTCCTC...GTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000616863.4
CDS-3UTR CAA 90 bp ATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATATTGAGCTTTCTGGATaGGCAGGGCTGAACACTGGA +
Preference number: 5 (lower is better)
Translates to: MNVNAPPQALTCLTCHCHIELSG*AGLNTG
Trigger: TCCAGTGTTCAGCCCTGCCAATCCAGAAAGCTCAAT...ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR CAA 90 bp GTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTAGTGCCCCAGCCACCTaGCTGAATGATGTACTCTGC +
Preference number: 5 (lower is better)
Translates to: VPQMSRQLLEVQIPANTTSAPAT*LNDVLC
Trigger: GCAGAGTACATCATTCAGCAAGGTGGCTGGGGCACT...AGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000618481.4
CDS-3UTR CAA 90 bp TGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGCAGCTCTGGGGGACTGACTaGTCCAGAGTTGTCGCTGGG +
Preference number: 5 (lower is better)
Translates to: CTYFEDSQRQHFYKVELQLWGTD*SRVVAG
Trigger: CCCAGCGACAACTCTGGACAAGTCAGTCCCCCAGAG...CTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp TGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGCTTCTTCAGGATCCATaGCAATCTGCTGCCAGGACT +
Preference number: 5 (lower is better)
Translates to: CHILLTQELTKSYQRKPMLLQDP*QSAART
Trigger: AGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAG...CATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp TTTCTCTGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGGGGGACAGTCTAGACTaGCCCTCAGACGGCGGCACG +
Preference number: 5 (lower is better)
Translates to: FLCVHISKIPKGSIFTRWGDSLD*PSDGGT
Trigger: CGTGCCGCCGTCTGAGGGCAAGTCTAGACTGTCCCC...CCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACAGAGAAA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp AGAAGTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGCATGCCACTGCCATGTaGAGCAGAAGTCCCCAATTA +
Preference number: 5 (lower is better)
Translates to: RSPQLSQSVPQMSRQLLEHATAM*SRSPQL
Trigger: TAATTGGGGACTTCTGCTCAACATGGCAGTGGCATG...CTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGACTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp TCCACAAGGCTCTCTTCCCTTGCGTTTATCTCCTTCTCACTCAGCAGCGTTTCTCATGCCACTGCCATGTaGAGCAGAAGTCCCCAATTA +
Preference number: 5 (lower is better)
Translates to: STRLSSLAFISFSLSSVSHATAM*SRSPQL
Trigger: TAATTGGGGACTTCTGCTCAACATGGCAGTGGCATG...AGAAACGCTGCTGAGTGAGAAGGAGATAAACGCAAGGGAAGAGAGCCTTGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CAA 90 bp ACTTCTTCAGGATCCATTGCAATCTGCTGCCAGGACTCAGGGCCTAGTGACACTTCTAGCCAGAGTTACTaGCAGTTGCACTCACAAGTG +
Preference number: 5 (lower is better)
Translates to: TSSGSIAICCQDSGPSDTSSQSY*QLHSQV
Trigger: CACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAGA...AGTGTCACTAGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CAA 90 bp GGAGCTGCAGTAGGAAGCAGTCCTCATGAGGGCTGTTCCCTTCCACTGCTGGAGTTAAAACATCAGGTTTaGGTGATCAGGGTAGGTAAA +
Preference number: 5 (lower is better)
Translates to: GAAVGSSPHEGCSLPLLELKHQV*VIRVGK
Trigger: TTTACCTACCCTGATCACCAAAACCTGATGTTTTAA...CTCCAGCAGTGGAAGGGAACAGCCCTCATGAGGACTGCTTCCTACTGCAGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp AGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTGGCTTCGATTGGTGCTaGAATGCGCTCAGCCAATGG +
Preference number: 5 (lower is better)
Translates to: RQLLEVQIPANTTPTLHPGFDWC*NALSQW
Trigger: CCATTGGCTGAGCGCATTCAAGCACCAATCGAAGCC...AGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp ATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATCTTAGAGGGTATAAGTaGGAGGTGGAAGGAATGGCC +
Preference number: 5 (lower is better)
Translates to: MNVNAPPQALTCLTCHCHLRGYK*EVEGMA
Trigger: GGCCATTCCTTCCACCTCCAACTTATACCCTCTAAG...ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp CTCTCTAGCCAGAGTTACTTGCAGTTGCACTCACAAGTGGGGACCCCAGGTCTCCTTACTGTCATATTATaGAGGGAATCAGCGCAAAGC +
Preference number: 5 (lower is better)
Translates to: LSSQSYLQLHSQVGTPGLLTVIL*RESAQS
Trigger: GCTTTGCGCTGATTCCCTCAATAATATGACAGTAAG...GAGACCTGGGGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS TCA 90 bp TCCATTGAGCTTTCTGGATTGGCAGGGCTGAACACTGGAGAAGTGTaGCGGTCAAAGCCTGTGCTGGTGAAGGCTTCAGAAATTTCTTTG +
Preference number: 5 (lower is better)
Translates to: SIELSGLAGLNTGEV*RSKPVLVKASEISL
Trigger: CAAAGAAATTTCTGAAGCCTTCACCAGCACAGGCTTTGACCGTCACACTTCTCCAGTGTTCAGCCCTGCCAATCCAGAAAGCTCAATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000399782.5
ENST00000418951.6
ENST00000464649.1
ENST00000493680.5
ENST00000611738.4
ENST00000618481.4
CDS GCA 90 bp ATATATAACAGCTCATACCCAGCCACCTTGCTGAATGATGTACTCTaGCGAATAGTCCTCCAGGTATGTCACGCCAAACTGCAGCAGTGC +
Preference number: 5 (lower is better)
Translates to: IYNSSYPATLLNDVL*RIVLQVCHAKLQQC
Trigger: GCACTGCTGCAGTTTGGCGTGACATACCTGGAGGACTATTCGGCAGAGTACATCATTCAGCAAGGTGGCTGGGTATGAGCTGTTATATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399782.5
ENST00000493680.5
CDS-3UTR CAA 90 bp GATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACGAGGACGCCATTGAATaGGCTGGTGAGGCTCCAAAA +
Preference number: 5 (lower is better)
Translates to: DLQSDECECPTSSPNMPNEDAIE*AGEAPK
Trigger: TTTTGGAGCCTCACCAGCCAATTCAATGGCGTCCTC...GTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000616863.4
CDS-3UTR CAA 90 bp TCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGGGAAAGATGTTGCTCTaGCAGCTTCTCTTGAGAGAG +
Preference number: 5 (lower is better)
Translates to: SDECECPTSSPNMPNMPLGKMLL*QLLLRE
Trigger: CTCTCTCAAGAGAAGCTGCAAGAGCAACATCTTTCC...CAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000616863.4
CDS-3UTR CAA 90 bp ATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATGGAAAGATGTTGCTCTaGCAGCTTCTCTTGAGAGAG +
Preference number: 5 (lower is better)
Translates to: MNVNAPPQALTCLTCHCHGKMLL*QLLLRE
Trigger: CTCTCTCAAGAGAAGCTGCAAGAGCAACATCTTTCC...ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000616863.4
CDS-3UTR CAA 90 bp TCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCAGGAAAGATGTTGCTCTaGCAGCTTCTCTTGAGAGAG +
Preference number: 5 (lower is better)
Translates to: SPIIPECSTNVQTAAGGSGKMLL*QLLLRE
Trigger: CTCTCTCAAGAGAAGCTGCAAGAGCAACATCTTTCC...TGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000616863.4
CDS-3UTR CAA 90 bp TCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCCTTCTTCAGGATCCATaGCAATCTGCTGCCAGGACT +
Preference number: 5 (lower is better)
Translates to: STNVQTAAGGSNSSQYNSLLQDP*QSAART
Trigger: AGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAG...GGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp CAGGGATGCTGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGATCAGAATTAGAGGAGTaGTTCTCACTCTTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: QGCCHILLTQELTKSYQRSELEE*FSLFSP
Trigger: TGGAGAGAAGAGTGAGAACAACTCCTCTAATTCTGA...TCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCAGCATCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp CAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATCAAGGCTCTCTTCCCTaGCGTTTATCTCCTTCTCAC +
Preference number: 5 (lower is better)
Translates to: QSVPQMSRQLLEVQIPANQGSLP*RLSPSH
Trigger: GTGAGAAGGAGATAAACGCAAGGGAAGAGAGCCTTG...ATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp AAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTAACAGCAGTATAGACTaGCCCTCAGACAGCGGCATG +
Preference number: 5 (lower is better)
Translates to: KCPDSCWRFKFQPIQLQPNSSID*PSDSGM
Trigger: CATGCCGCTGTCTGAGGGCAAGTCTATACTGCTGTT...AGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp AGGAGTTGTTCTCACTCTTCTCTCCAGCTCCGTTGCTGTCTAAGCTTTTCACTTAACAGCAGTATAGACTaGCCCTCAGACAGCGGCATG +
Preference number: 5 (lower is better)
Translates to: RSCSHSSLQLRCCLSFSLNSSID*PSDSGM
Trigger: CATGCCGCTGTCTGAGGGCAAGTCTATACTGCTGTT...AAGTGAAAAGCTTAGACAGCAACGGAGCTGGAGAGAAGAGTGAGAACAACTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CAA 90 bp TCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCCATGCCACTGCCATGTaGAGCAGAAGTCCCCAATTA +
Preference number: 5 (lower is better)
Translates to: STNVQTAAGGSNSSQYNSHATAM*SRSPQL
Trigger: TAATTGGGGACTTCTGCTCAACATGGCAGTGGCATG...GGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp TGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGTCTAGCCAGAGTTACTaGCAGTTGCACTCACAAGTG +
Preference number: 5 (lower is better)
Translates to: CHILLTQELTKSYQRKPMSSQSY*QLHSQV
Trigger: CACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAGA...CATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp AAGCTTTTCACTTCTTCAGGATCCATTGCAATCTGCTGCCAGGACTCAGGGCCTTCTAGCCAGAGTTACTaGCAGTTGCACTCACAAGTG +
Preference number: 5 (lower is better)
Translates to: KLFTSSGSIAICCQDSGPSSQSY*QLHSQV
Trigger: CACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAGA...AGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGTGAAAAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CAA 90 bp CAGAAGTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGATCTAGCCAGAGTTACTaGCAGTTGCACTCACAAGTG +
Preference number: 5 (lower is better)
Translates to: QKSPIIPECSTNVQTAAGSSQSY*QLHSQV
Trigger: CACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAGA...TCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGACTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp CAATGTCTAGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATTCTAGCCAGAGTTACTaGCAGTTGCACTCACAAGTG +
Preference number: 5 (lower is better)
Translates to: QCLETFSFVISGRGCHWHSSQSY*QLHSQV
Trigger: CACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAGA...ATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCTAGACATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp GTGTCTGTTAGCAATCAGATAGCCTACAAGGCCGTCTTGATGGGTATGATCACCCTTAGAGGGTATAAGTaGGAGGTGGAAGGAATGGCC +
Preference number: 5 (lower is better)
Translates to: VSVSNQIAYKAVLMGMITLRGYK*EVEGMA
Trigger: GGCCATTCCTTCCACCTCCAACTTATACCCTCTAAG...GGTGATCATACCCATCAAGACGGCCTTGTAGGCTATCTGATTGCTAACAGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp GGAGGCCCTTGGGATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTCTTACTGTCATATTATaGAGGGAATCAGCGCAAAGC +
Preference number: 5 (lower is better)
Translates to: GGPWDLQSDECECPTSSPLTVIL*RESAQS
Trigger: GCTTTGCGCTGATTCCCTCAATAATATGACAGTAAG...AGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATCCCAAGGGCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp AGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGCTTACTGTCATATTATaGAGGGAATCAGCGCAAAGC +
Preference number: 5 (lower is better)
Translates to: RDIFVCHLWEGVPLASSGLTVIL*RESAQS
Trigger: GCTTTGCGCTGATTCCCTCAATAATATGACAGTAAG...CCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS TCA 90 bp GTCATTGCTATCTTCTGCAGTGATTCCAGGGTATTCCTCCTCCTCTaGCTCAAGACTAAACACAGTGCCTGGCTCAGGAGCATTTGCAAT +
Preference number: 5 (lower is better)
Translates to: VIAIFCSDSRVFLLL*LKTKHSAWLRSICN
Trigger: ATTGCAAATGCTCCTGAGCCAGGCACTGTGTTTAGTCTTGAGTCAGAGGAGGAGGAATACCCTGGAATCACTGCAGAAGATAGCAATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355028.4
CDS CCA 90 bp CTCAGGAGCATTTGCAATGCTTTATGGAGAGGCTCTTTCAGTTCCTaGGACACTTTTTCTCCAAGATGGGCCAAGCAGTCTTCCATTGAG +
Preference number: 5 (lower is better)
Translates to: LRSICNALWRGSFSS*DTFSPRWAKQSSIE
Trigger: CTCAATGGAAGACTGCTTGGCCCATCTTGGAGAAAAAGTGTCCCAGGAACTGAAAGAGCCTCTCCATAAAGCATTGCAAATGCTCCTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000399782.5
ENST00000418951.6
ENST00000464649.1
ENST00000493680.5
ENST00000611738.4
ENST00000618481.4
CDS-3UTR CAA 90 bp GTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCTGGCTCAGGAGCATTaGCAATGCTTTATGGAGAGG +
Preference number: 5 (lower is better)
Translates to: VPQMSRQLLEVQIPANTTLAQEH*QCFMER
Trigger: CCTCTCCATAAAGCATTGCAAATGCTCCTGAGCCAG...AGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000611738.4
ENST00000618481.4
CDS-3UTR CAA 90 bp CAGGGATGCTGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAGTTCTTGACCACGTCTaGTCAATTCCAAAAGCATTT +
Preference number: 5 (lower is better)
Translates to: QGCCHILLTQELTKSYQRVLDHV*SIPKAF
Trigger: AAATGCTTTTGGAATTGACAAGACGTGGTCAAGAAC...TCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCAGCATCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000618481.4
CDS-3UTR CAA 90 bp GAAATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACGTTCTTGACCACGTCTaGTCAATTCCAAAAGCATTT +
Preference number: 5 (lower is better)
Translates to: EMQVRRGIKNASRGRWVNVLDHV*SIPKAF
Trigger: AAATGCTTTTGGAATTGACAAGACGTGGTCAAGAAC...GTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000618481.4
CDS-3UTR CAA 90 bp AAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACACACAAACATCTCTGGGGGACTGACTaGTCCAGAGTTGTCGCTGGG +
Preference number: 5 (lower is better)
Translates to: KTQNKDTLQDKAGKTHKHLWGTD*SRVVAG
Trigger: CCCAGCGACAACTCTGGACAAGTCAGTCCCCCAGAG...ATGTTTGTGTGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp AGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTCTTCTTCAGGATCCATaGCAATCTGCTGCCAGGACT +
Preference number: 5 (lower is better)
Translates to: RQLLEVQIPANTTPTLHPLLQDP*QSAART
Trigger: AGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAG...AGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp ATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCAGTAGCTGAGTTCAGGAAGTGCCTCTaGCAGCTCCCGCGCTGGCAA +
Preference number: 5 (lower is better)
Translates to: IEKDEILRGLRAKKSVAEFRKCL*QLPRWQ
Trigger: TTGCCAGCGCGGGAGCTGCAAGAGGCACTTCCTGAA...CTCAGCTACTGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp GCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCAAGGCTCTCTTCCCTaGCGTTTATCTCCTTCTCAC +
Preference number: 5 (lower is better)
Translates to: AAGGSNSSQYNSNLTSFCQGSLP*RLSPSH
Trigger: GTGAGAAGGAGATAAACGCAAGGGAAGAGAGCCTTG...ACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp GATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACCAAGGCTCTCTTCCCTaGCGTTTATCTCCTTCTCAC +
Preference number: 5 (lower is better)
Translates to: DLQSDECECPTSSPNMPNQGSLP*RLSPSH
Trigger: GTGAGAAGGAGATAAACGCAAGGGAAGAGAGCCTTG...GTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp CTCCAGCTCCGTTGCTGTCTAAGCTTTTCACTTCTTCAGGATCCATTGCAATCTCATGCCACTGCCATGTaGAGCAGAAGTCCCCAATTA +
Preference number: 5 (lower is better)
Translates to: LQLRCCLSFSLLQDPLQSHATAM*SRSPQL
Trigger: TAATTGGGGACTTCTGCTCAACATGGCAGTGGCATG...AGATTGCAATGGATCCTGAAGAAGTGAAAAGCTTAGACAGCAACGGAGCTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CAA 90 bp CTATCCCAATTCTTCCTAAGTAAACCCTCTCTCGCTAAAGCAGTGGGTCTCAATCAGAGTTACTTGCAGTaGCACTCACAAGTGGGGACC +
Preference number: 5 (lower is better)
Translates to: LSQFFLSKPSLAKAVGLNQSYLQ*HSQVGT
Trigger: GGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCTG...ATTGAGACCCACTGCTTTAGCGAGAGAGGGTTTACTTAGGAAGAATTGGGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp TGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTCAGAGTTACTTGCAGTaGCACTCACAAGTGGGGACC +
Preference number: 5 (lower is better)
Translates to: CWRFKFQPIQLQPYILLSQSYLQ*HSQVGT
Trigger: GGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCTG...AGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp CAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATTCTAGCCAGAGTTACTaGCAGTTGCACTCACAAGTG +
Preference number: 5 (lower is better)
Translates to: QSVPQMSRQLLEVQIPANSSQSY*QLHSQV
Trigger: CACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAGA...ATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp GATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACCTTAGAGGGTATAAGTaGGAGGTGGAAGGAATGGCC +
Preference number: 5 (lower is better)
Translates to: DLQSDECECPTSSPNMPNLRGYK*EVEGMA
Trigger: GGCCATTCCTTCCACCTCCAACTTATACCCTCTAAG...GTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp CAGGGATGCTGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAGGCAAGGAGACTACTaGCCTTACTGTCATATTATT +
Preference number: 5 (lower is better)
Translates to: QGCCHILLTQELTKSYQRRQGDY*PYCHII
Trigger: AATAATATGACAGTAAGGCAAGTAGTCTCCTTGCCT...TCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCAGCATCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp ATCATGATAGTAGGCTATAACTCAAGTTTCAATGCCACGATGGTCGTGCTTTCTCTTGAGCCCAGGAGTTaGAGACCGAAGCCTGCCATG +
Preference number: 5 (lower is better)
Translates to: IMIVGYNSSFNATMVVLSLEPRS*RPKPAM
Trigger: CATGGCAGGCTTCGGTCTCAAACTCCTGGGCTCAAG...AGAAAGCACGACCATCGTGGCATTGAAACTTGAGTTATAGCCTACTATCATGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS CCA 90 bp AACCAGAGGCACCAAAATTGGCTCAGGAGCATTTGCAATGCTTTATaGAGAGGCTCTTTCAGTTCCTGGGACACTTTTTCTCCAAGATGG +
Preference number: 5 (lower is better)
Translates to: NQRHQNWLRSICNAL*RGSFSSWDTFSPRW
Trigger: CCATCTTGGAGAAAAAGTGTCCCAGGAACTGAAAGAGCCTCTCCATAAAGCATTGCAAATGCTCCTGAGCCAATTTTGGTGCCTCTGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418951.6
CDS-3UTR CAA 90 bp GCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTCTCTTGCAGCTTCTCTaGAGAGAGGAGTCCCAAGTA +
Preference number: 5 (lower is better)
Translates to: AGGSNSSQYNSNLTSFCLLLQLL*REESQV
Trigger: TACTTGGGACTCCTCTCTCAAGAGAAGCTGCAAGAG...AAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000616863.4
CDS-3UTR CAA 90 bp GTGCAGAGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGCTCTTGCAGCTTCTCTaGAGAGAGGAGTCCCAAGTA +
Preference number: 5 (lower is better)
Translates to: VQSLLIEKDEILRGLRAKLLQLL*REESQV
Trigger: TACTTGGGACTCCTCTCTCAAGAGAAGCTGCAAGAG...CTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCTCTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000616863.4
CDS-3UTR CAA 90 bp GCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTCTGGCTCAGGAGCATTaGCAATGCTTTATGGAGAGG +
Preference number: 5 (lower is better)
Translates to: AGGSNSSQYNSNLTSFCLLAQEH*QCFMER
Trigger: CCTCTCCATAAAGCATTGCAAATGCTCCTGAGCCAG...AAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000611738.4
ENST00000618481.4
CDS-3UTR CAA 90 bp GCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTCTTCTTCAGGATCCATaGCAATCTGCTGCCAGGACT +
Preference number: 5 (lower is better)
Translates to: AGGSNSSQYNSNLTSFCLLLQDP*QSAART
Trigger: AGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAG...AAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp GTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGCAGGCTTCTTCAGGATCCATaGCAATCTGCTGCCAGGACT +
Preference number: 5 (lower is better)
Translates to: VHISKIPKGSIFTRWSCRLLQDP*QSAART
Trigger: AGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAG...CCTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp TCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGTCAGAATTAGAGGAGTaGTTCTCACTCTTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: SDECECPTSSPNMPNMPLSELEE*FSLFSP
Trigger: TGGAGAGAAGAGTGAGAACAACTCCTCTAATTCTGA...CAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp TCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCATCAGAATTAGAGGAGTaGTTCTCACTCTTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: SPIIPECSTNVQTAAGGSSELEE*FSLFSP
Trigger: TGGAGAGAAGAGTGAGAACAACTCCTCTAATTCTGA...TGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp GCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTCAAGGCTCTCTTCCCTaGCGTTTATCTCCTTCTCAC +
Preference number: 5 (lower is better)
Translates to: AGGSNSSQYNSNLTSFCLQGSLP*RLSPSH
Trigger: GTGAGAAGGAGATAAACGCAAGGGAAGAGAGCCTTG...AAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp GTGCAGAGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGCATGCCACTGCCATGTaGAGCAGAAGTCCCCAATTA +
Preference number: 5 (lower is better)
Translates to: VQSLLIEKDEILRGLRAKHATAM*SRSPQL
Trigger: TAATTGGGGACTTCTGCTCAACATGGCAGTGGCATG...CTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCTCTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp GATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACTCTAGCCAGAGTTACTaGCAGTTGCACTCACAAGTG +
Preference number: 5 (lower is better)
Translates to: DLQSDECECPTSSPNMPNSSQSY*QLHSQV
Trigger: CACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAGA...GTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp GTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATGTTGAGTTAAAACATCAGGTTTaGGTGATCAGGGTAGGTAAA +
Preference number: 5 (lower is better)
Translates to: VNAPPQALTCLTCHCHVELKHQV*VIRVGK
Trigger: TTTACCTACCCTGATCACCAAAACCTGATGTTTTAA...CTCAACATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp AATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCATTAAAACATCAGGTTTaGGTGATCAGGGTAGGTAAA +
Preference number: 5 (lower is better)
Translates to: NAGEKGYQECLEGEMGEPLKHQV*VIRVGK
Trigger: TTTACCTACCCTGATCACCAAAACCTGATGTTTTAA...TGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp TGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGCTTACTGTCATATTATaGAGGGAATCAGCGCAAAGC +
Preference number: 5 (lower is better)
Translates to: CHILLTQELTKSYQRKPMLTVIL*RESAQS
Trigger: GCTTTGCGCTGATTCCCTCAATAATATGACAGTAAG...CATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp AAGCTTTTCACTTCTTCAGGATCCATTGCAATCTGCTGCCAGGACTCAGGGCCTCTTACTGTCATATTATaGAGGGAATCAGCGCAAAGC +
Preference number: 5 (lower is better)
Translates to: KLFTSSGSIAICCQDSGPLTVIL*RESAQS
Trigger: GCTTTGCGCTGATTCCCTCAATAATATGACAGTAAG...AGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGTGAAAAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CAA 90 bp CCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGGACTTACTGTCATATTATaGAGGGAATCAGCGCAAAGC +
Preference number: 5 (lower is better)
Translates to: PHPVNSGADQELPEKANGLTVIL*RESAQS
Trigger: GCTTTGCGCTGATTCCCTCAATAATATGACAGTAAG...TCCATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp GTGAACCAGAAGGTCAACAGTTGCATTTCTTCATCTAGAATGTTCTCTAGAAGGGCCTACAAGGCCGTCTaGATGGGTATGATCACCACC +
Preference number: 5 (lower is better)
Translates to: VNQKVNSCISSSRMFSRRAYKAV*MGMITT
Trigger: GGTGGTGATCATACCCATCAAGACGGCCTTGTAGGC...CCTTCTAGAGAACATTCTAGATGAAGAAATGCAACTGTTGACCTTCTGGTTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS TCA 90 bp GATGTTGCTCTTGCAGCTTCTCTTGAGAGAGGAGTCCCAAGTAGCTaGGAACAACATACTTTGTTTCATAGTGAAATCCCAGAGGCACAG +
Preference number: 5 (lower is better)
Translates to: DVALAASLERGVPSS*EQHTLFHSEIPEAQ
Trigger: CTGTGCCTCTGGGATTTCACTATGAAACAAAGTATGTTGTTCTCAGCTACTTGGGACTCCTCTCTCAAGAGAAGCTGCAAGAGCAACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399781.5
ENST00000399782.5
ENST00000418951.6
ENST00000493680.5
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000616863.4
CDS-3UTR CAA 90 bp ATCATGATAGTAGGCTATAACTCAAGTTTCAATGCCACGATGGTCGTGCTTTCTGAGGACGCCATTGAATaGGCTGGTGAGGCTCCAAAA +
Preference number: 5 (lower is better)
Translates to: IMIVGYNSSFNATMVVLSEDAIE*AGEAPK
Trigger: TTTTGGAGCCTCACCAGCCAATTCAATGGCGTCCTC...AGAAAGCACGACCATCGTGGCATTGAAACTTGAGTTATAGCCTACTATCATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS-3UTR CAA 90 bp CTAACAGGTGGGAAAATAAAGCAGCAAGTAGCCGCTTCCATACCACATTTCTTCGGAAAGATGTTGCTCTaGCAGCTTCTCTTGAGAGAG +
Preference number: 5 (lower is better)
Translates to: LTGGKIKQQVAASIPHFFGKMLL*QLLLRE
Trigger: CTCTCTCAAGAGAAGCTGCAAGAGCAACATCTTTCC...GAAGAAATGTGGTATGGAAGCGGCTACTTGCTGCTTTATTTTCCCACCTGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000616863.4
CDS-3UTR CAA 90 bp GCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTGGAAAGATGTTGCTCTaGCAGCTTCTCTTGAGAGAG +
Preference number: 5 (lower is better)
Translates to: AGGSNSSQYNSNLTSFCLGKMLL*QLLLRE
Trigger: CTCTCTCAAGAGAAGCTGCAAGAGCAACATCTTTCC...AAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000616863.4
CDS-3UTR CAA 90 bp CAGAAGTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGTTCTTGACCACGTCTaGTCAATTCCAAAAGCATTT +
Preference number: 5 (lower is better)
Translates to: QKSPIIPECSTNVQTAAGVLDHV*SIPKAF
Trigger: AAATGCTTTTGGAATTGACAAGACGTGGTCAAGAAC...TCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGACTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000618481.4
CDS-3UTR CAA 90 bp TGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGCAGCAAGGCTCTCTTCCCTaGCGTTTATCTCCTTCTCAC +
Preference number: 5 (lower is better)
Translates to: CTYFEDSQRQHFYKVELQQGSLP*RLSPSH
Trigger: GTGAGAAGGAGATAAACGCAAGGGAAGAGAGCCTTG...CTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp CTAAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACACACAAACAACAGCAGTATAGACTaGCCCTCAGACAGCGGCATG +
Preference number: 5 (lower is better)
Translates to: LKHRTKTRYRIKLERHTNNSSID*PSDSGM
Trigger: CATGCCGCTGTCTGAGGGCAAGTCTATACTGCTGTT...GTTTGTGTGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp GTGAACCAGAAGGTCAACAGTTGCATTTCTTCATCTAGAATGTTCTCTAGAAGGCAGAGTTACTTGCAGTaGCACTCACAAGTGGGGACC +
Preference number: 5 (lower is better)
Translates to: VNQKVNSCISSSRMFSRRQSYLQ*HSQVGT
Trigger: GGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCTG...CCTTCTAGAGAACATTCTAGATGAAGAAATGCAACTGTTGACCTTCTGGTTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp GTGCAGAGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGTCTAGCCAGAGTTACTaGCAGTTGCACTCACAAGTG +
Preference number: 5 (lower is better)
Translates to: VQSLLIEKDEILRGLRAKSSQSY*QLHSQV
Trigger: CACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAGA...CTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCTCTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp AAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACACACAAACATGGCTTCGATTGGTGCTaGAATGCGCTCAGCCAATGG +
Preference number: 5 (lower is better)
Translates to: KTQNKDTLQDKAGKTHKHGFDWC*NALSQW
Trigger: CCATTGGCTGAGCGCATTCAAGCACCAATCGAAGCC...ATGTTTGTGTGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp AGAAGTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGAGGCAAGGAGACTACTaGCCTTACTGTCATATTATT +
Preference number: 5 (lower is better)
Translates to: RSPQLSQSVPQMSRQLLERQGDY*PYCHII
Trigger: AATAATATGACAGTAAGGCAAGTAGTCTCCTTGCCT...CTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGACTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp AAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACACACAAACATGCCTACAAGGCCGTCTaGATGGGTATGATCACCACC +
Preference number: 5 (lower is better)
Translates to: KTQNKDTLQDKAGKTHKHAYKAV*MGMITT
Trigger: GGTGGTGATCATACCCATCAAGACGGCCTTGTAGGC...ATGTTTGTGTGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp ATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCAGTAGCTGAGGCCTACAAGGCCGTCTaGATGGGTATGATCACCACC +
Preference number: 5 (lower is better)
Translates to: IEKDEILRGLRAKKSVAEAYKAV*MGMITT
Trigger: GGTGGTGATCATACCCATCAAGACGGCCTTGTAGGC...CTCAGCTACTGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS TCA 90 bp GTCATTGCTATCTTCTGCAGTGATTCCAGGGTATTCCTCCTCCTCTaGCTCAAGACTAAACACAGTGCCCTTCAGAAATTTCTTTGTCCA +
Preference number: 5 (lower is better)
Translates to: VIAIFCSDSRVFLLL*LKTKHSALQKFLCP
Trigger: TGGACAAAGAAATTTCTGAAGGGCACTGTGTTTAGTCTTGAGTCAGAGGAGGAGGAATACCCTGGAATCACTGCAGAAGATAGCAATGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616863.4
CDS GCA 90 bp CAGGCTATGTTCAGTTCCACAAACATGTATTGCGTTTCAAGTGTTTaGCAAGGGAGCAGGTCAAATAAGTATCTACACAGTCACGACAGC +
Preference number: 5 (lower is better)
Translates to: QAMFSSTNMYCVSSV*QGSRSNKYLHSHDS
Trigger: GCTGTCGTGACTGTGTAGATACTTATTTGACCTGCTCCCTTGGCAAACACTTGAAACGCAATACATGTTTGTGGAACTGAACATAGCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399781.5
ENST00000399782.5
CDS GCA 90 bp GCCTTGCTGCATGCACAGGCTATGTTCAGTTCCACAAACATGTATTaGGTTTCAAGTGTTTGCCAAGGGAGCAGGTCAAATAAGTATCTA +
Preference number: 5 (lower is better)
Translates to: ALLHAQAMFSSTNMY*VSSVCQGSRSNKYL
Trigger: TAGATACTTATTTGACCTGCTCCCTTGGCAAACACTTGAAACGCAATACATGTTTGTGGAACTGAACATAGCCTGTGCATGCAGCAAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399781.5
ENST00000399782.5
CDS-3UTR CAA 90 bp AGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCACTGGCTCAGGAGCATTaGCAATGCTTTATGGAGAGG +
Preference number: 5 (lower is better)
Translates to: SLLIEKDEILRGLRAKKSLAQEH*QCFMER
Trigger: CCTCTCCATAAAGCATTGCAAATGCTCCTGAGCCAG...TGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000611738.4
ENST00000618481.4
CDS-3UTR CAA 90 bp ATCATGATAGTAGGCTATAACTCAAGTTTCAATGCCACGATGGTCGTGCTTTCTCTGGCTCAGGAGCATTaGCAATGCTTTATGGAGAGG +
Preference number: 5 (lower is better)
Translates to: IMIVGYNSSFNATMVVLSLAQEH*QCFMER
Trigger: CCTCTCCATAAAGCATTGCAAATGCTCCTGAGCCAG...AGAAAGCACGACCATCGTGGCATTGAAACTTGAGTTATAGCCTACTATCATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS-3UTR CAA 90 bp GTGTCTGTTAGCAATCAGATAGCCTACAAGGCCGTCTTGATGGGTATGATCACCGTTCTTGACCACGTCTaGTCAATTCCAAAAGCATTT +
Preference number: 5 (lower is better)
Translates to: VSVSNQIAYKAVLMGMITVLDHV*SIPKAF
Trigger: AAATGCTTTTGGAATTGACAAGACGTGGTCAAGAAC...GGTGATCATACCCATCAAGACGGCCTTGTAGGCTATCTGATTGCTAACAGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000618481.4
CDS-3UTR CAA 90 bp AGGAGTTGTTCTCACTCTTCTCTCCAGCTCCGTTGCTGTCTAAGCTTTTCACTTTCAGAATTAGAGGAGTaGTTCTCACTCTTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: RSCSHSSLQLRCCLSFSLSELEE*FSLFSP
Trigger: TGGAGAGAAGAGTGAGAACAACTCCTCTAATTCTGA...AAGTGAAAAGCTTAGACAGCAACGGAGCTGGAGAGAAGAGTGAGAACAACTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CAA 90 bp CTAAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACACACAAACCAAGGCTCTCTTCCCTaGCGTTTATCTCCTTCTCAC +
Preference number: 5 (lower is better)
Translates to: LKHRTKTRYRIKLERHTNQGSLP*RLSPSH
Trigger: GTGAGAAGGAGATAAACGCAAGGGAAGAGAGCCTTG...GTTTGTGTGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp GTGAACCAGAAGGTCAACAGTTGCATTTCTTCATCTAGAATGTTCTCTAGAAGGCATGCCACTGCCATGTaGAGCAGAAGTCCCCAATTA +
Preference number: 5 (lower is better)
Translates to: VNQKVNSCISSSRMFSRRHATAM*SRSPQL
Trigger: TAATTGGGGACTTCTGCTCAACATGGCAGTGGCATG...CCTTCTAGAGAACATTCTAGATGAAGAAATGCAACTGTTGACCTTCTGGTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp TGGGTGAACCAGAAGGTCAACAGTTGCATTTCTTCATCTAGAATGTTCTCTAGACATGCCACTGCCATGTaGAGCAGAAGTCCCCAATTA +
Preference number: 5 (lower is better)
Translates to: WVNQKVNSCISSSRMFSRHATAM*SRSPQL
Trigger: TAATTGGGGACTTCTGCTCAACATGGCAGTGGCATG...TCTAGAGAACATTCTAGATGAAGAAATGCAACTGTTGACCTTCTGGTTCACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp CTCTGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTCTAGCCAGAGTTACTaGCAGTTGCACTCACAAGTG +
Preference number: 5 (lower is better)
Translates to: LCVHISKIPKGSIFTRWSSSQSY*QLHSQV
Trigger: CACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAGA...GCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp AGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACCTGATTAGGACTATTTaGGTTTATTACCCTGGCATT +
Preference number: 5 (lower is better)
Translates to: SQMNVNAPPQALTCLTCHLIRTI*VYYPGI
Trigger: AATGCCAGGGTAATAAACCAAAATAGTCCTAATCAG...GTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp CAATGTCTAGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTGATTAGGACTATTTaGGTTTATTACCCTGGCATT +
Preference number: 5 (lower is better)
Translates to: QCLETFSFVISGRGCHWHLIRTI*VYYPGI
Trigger: AATGCCAGGGTAATAAACCAAAATAGTCCTAATCAG...ATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCTAGACATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp CCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGGACTGATTAGGACTATTTaGGTTTATTACCCTGGCATT +
Preference number: 5 (lower is better)
Translates to: PHPVNSGADQELPEKANGLIRTI*VYYPGI
Trigger: AATGCCAGGGTAATAAACCAAAATAGTCCTAATCAG...TCCATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp TCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCACTGATTAGGACTATTTaGGTTTATTACCCTGGCATT +
Preference number: 5 (lower is better)
Translates to: SPIIPECSTNVQTAAGGSLIRTI*VYYPGI
Trigger: AATGCCAGGGTAATAAACCAAAATAGTCCTAATCAG...TGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp CAGAAGTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGATTAAAACATCAGGTTTaGGTGATCAGGGTAGGTAAA +
Preference number: 5 (lower is better)
Translates to: QKSPIIPECSTNVQTAAGLKHQV*VIRVGK
Trigger: TTTACCTACCCTGATCACCAAAACCTGATGTTTTAA...TCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGACTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp GTGAACCAGAAGGTCAACAGTTGCATTTCTTCATCTAGAATGTTCTCTAGAAGGCTTAGAGGGTATAAGTaGGAGGTGGAAGGAATGGCC +
Preference number: 5 (lower is better)
Translates to: VNQKVNSCISSSRMFSRRLRGYK*EVEGMA
Trigger: GGCCATTCCTTCCACCTCCAACTTATACCCTCTAAG...CCTTCTAGAGAACATTCTAGATGAAGAAATGCAACTGTTGACCTTCTGGTTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp GTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCTTACTGTCATATTATaGAGGGAATCAGCGCAAAGC +
Preference number: 5 (lower is better)
Translates to: VPQMSRQLLEVQIPANTTLTVIL*RESAQS
Trigger: GCTTTGCGCTGATTCCCTCAATAATATGACAGTAAG...AGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp TCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAGGCAAGGAGACTACTaGCCTTACTGTCATATTATT +
Preference number: 5 (lower is better)
Translates to: STNVQTAAGGSNSSQYNSRQGDY*PYCHII
Trigger: AATAATATGACAGTAAGGCAAGTAGTCTCCTTGCCT...GGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp ATCATGATAGTAGGCTATAACTCAAGTTTCAATGCCACGATGGTCGTGCTTTCTTCATACCCAGCCACCTaGCTGAATGATGTACTCTGC +
Preference number: 5 (lower is better)
Translates to: IMIVGYNSSFNATMVVLSSYPAT*LNDVLC
Trigger: GCAGAGTACATCATTCAGCAAGGTGGCTGGGTATGA...AGAAAGCACGACCATCGTGGCATTGAAACTTGAGTTATAGCCTACTATCATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS CCA 90 bp AAGTATTTTAGCATCGTTTGGCTCAGGAGCATTTGCAATGCTTTATaGAGAGGCTCTTTCAGTTCCTGGGACACTTTTTCTCCAAGATGG +
Preference number: 5 (lower is better)
Translates to: KYFSIVWLRSICNAL*RGSFSSWDTFSPRW
Trigger: CCATCTTGGAGAAAAAGTGTCCCAGGAACTGAAAGAGCCTCTCCATAAAGCATTGCAAATGCTCCTGAGCCAAACGATGCTAAAATACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464649.1
CDS-3UTR CAA 90 bp TTTCTCTGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGCTGGCTCAGGAGCATTaGCAATGCTTTATGGAGAGG +
Preference number: 5 (lower is better)
Translates to: FLCVHISKIPKGSIFTRWLAQEH*QCFMER
Trigger: CCTCTCCATAAAGCATTGCAAATGCTCCTGAGCCAG...CCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACAGAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000611738.4
ENST00000618481.4
CDS-3UTR CAA 90 bp GAATTAGAGGAGTTGTTCTCACTCTTCTCTCCAGCTCCGTTGCTGTCTAAGCTTGTTCTTGACCACGTCTaGTCAATTCCAAAAGCATTT +
Preference number: 5 (lower is better)
Translates to: ELEELFSLFSPAPLLSKLVLDHV*SIPKAF
Trigger: AAATGCTTTTGGAATTGACAAGACGTGGTCAAGAAC...AAGCTTAGACAGCAACGGAGCTGGAGAGAAGAGTGAGAACAACTCCTCTAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
CDS-3UTR CAA 90 bp AAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACACACAAACATCTTCTTCAGGATCCATaGCAATCTGCTGCCAGGACT +
Preference number: 5 (lower is better)
Translates to: KTQNKDTLQDKAGKTHKHLLQDP*QSAART
Trigger: AGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAG...ATGTTTGTGTGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp ATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCAGTAGCTGAGCTTCTTCAGGATCCATaGCAATCTGCTGCCAGGACT +
Preference number: 5 (lower is better)
Translates to: IEKDEILRGLRAKKSVAELLQDP*QSAART
Trigger: AGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAG...CTCAGCTACTGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp GTGCAGAGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGTCAGAATTAGAGGAGTaGTTCTCACTCTTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: VQSLLIEKDEILRGLRAKSELEE*FSLFSP
Trigger: TGGAGAGAAGAGTGAGAACAACTCCTCTAATTCTGA...CTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCTCTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp TGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTCAGAATTAGAGGAGTaGTTCTCACTCTTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: CWRFKFQPIQLQPYILLSSELEE*FSLFSP
Trigger: TGGAGAGAAGAGTGAGAACAACTCCTCTAATTCTGA...AGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp TCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCCTGATTAGGACTATTTaGGTTTATTACCCTGGCATT +
Preference number: 5 (lower is better)
Translates to: STNVQTAAGGSNSSQYNSLIRTI*VYYPGI
Trigger: AATGCCAGGGTAATAAACCAAAATAGTCCTAATCAG...GGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp GCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTCTTACTGTCATATTATaGAGGGAATCAGCGCAAAGC +
Preference number: 5 (lower is better)
Translates to: AGGSNSSQYNSNLTSFCLLTVIL*RESAQS
Trigger: GCTTTGCGCTGATTCCCTCAATAATATGACAGTAAG...AAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp CTCTTCTCTCCAGCTCCGTTGCTGTCTAAGCTTTTCACTTCTTCAGGATCCATTAGGCAAGGAGACTACTaGCCTTACTGTCATATTATT +
Preference number: 5 (lower is better)
Translates to: LFSPAPLLSKLFTSSGSIRQGDY*PYCHII
Trigger: AATAATATGACAGTAAGGCAAGTAGTCTCCTTGCCT...AATGGATCCTGAAGAAGTGAAAAGCTTAGACAGCAACGGAGCTGGAGAGAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CAA 90 bp ATCATGATAGTAGGCTATAACTCAAGTTTCAATGCCACGATGGTCGTGCTTTCTTTGTTGTTGTTGTTGTaGTTGCTCTGTTGCCCAGGC +
Preference number: 5 (lower is better)
Translates to: IMIVGYNSSFNATMVVLSLLLLL*LLCCPG
Trigger: GCCTGGGCAACAGAGCAACAACAACAACAACAACAA...AGAAAGCACGACCATCGTGGCATTGAAACTTGAGTTATAGCCTACTATCATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS TCA 90 bp GCGCCTGGAACATACTTAACTTGTATTAATGGATGTTTGTTTACTTaGATCCGAGAGTTCTTTGGAGGAGTATCGGAAGGTATCGGTCAG +
Preference number: 5 (lower is better)
Translates to: APGTYLTCINGCLFT*IREFFGGVSEGIGQ
Trigger: CTGACCGATACCTTCCGATACTCCTCCAAAGAACTCTCGGATTCAAGTAAACAAACATCCATTAATACAAGTTAAGTATGTTCCAGGCGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399781.5
CDS-3UTR CAA 90 bp TTTCTCTGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGGGAAAGATGTTGCTCTaGCAGCTTCTCTTGAGAGAG +
Preference number: 5 (lower is better)
Translates to: FLCVHISKIPKGSIFTRWGKMLL*QLLLRE
Trigger: CTCTCTCAAGAGAAGCTGCAAGAGCAACATCTTTCC...CCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACAGAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000616863.4
CDS-3UTR CAA 90 bp GATTCTCAATTTAGCATGAGCGGAGGCCCTTGGGATTTACAGTCAGATGAATGTGTTCTTGACCACGTCTaGTCAATTCCAAAAGCATTT +
Preference number: 5 (lower is better)
Translates to: DSQFSMSGGPWDLQSDECVLDHV*SIPKAF
Trigger: AAATGCTTTTGGAATTGACAAGACGTGGTCAAGAAC...ACATTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000618481.4
CDS-3UTR CAA 90 bp TTTCTCTGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGTCTAGCCAGAGTTACTaGCAGTTGCACTCACAAGTG +
Preference number: 5 (lower is better)
Translates to: FLCVHISKIPKGSIFTRWSSQSY*QLHSQV
Trigger: CACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAGA...CCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACAGAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp TGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTTCGTTCTTGACCACGTCTaGTCAATTCCAAAAGCATTT +
Preference number: 5 (lower is better)
Translates to: WRFKFQPIQLQPYILLSFVLDHV*SIPKAF
Trigger: AAATGCTTTTGGAATTGACAAGACGTGGTCAAGAAC...GAAAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000618481.4
CDS-3UTR CAA 90 bp GATTCTCAATTTAGCATGAGCGGAGGCCCTTGGGATTTACAGTCAGATGAATGTCTGATTAGGACTATTTaGGTTTATTACCCTGGCATT +
Preference number: 5 (lower is better)
Translates to: DSQFSMSGGPWDLQSDECLIRTI*VYYPGI
Trigger: AATGCCAGGGTAATAAACCAAAATAGTCCTAATCAG...ACATTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp GTGCAGAGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGTTAAAACATCAGGTTTaGGTGATCAGGGTAGGTAAA +
Preference number: 5 (lower is better)
Translates to: VQSLLIEKDEILRGLRAKLKHQV*VIRVGK
Trigger: TTTACCTACCCTGATCACCAAAACCTGATGTTTTAA...CTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCTCTGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp GATTCTCAATTTAGCATGAGCGGAGGCCCTTGGGATTTACAGTCAGATGAATGTTTAAAACATCAGGTTTaGGTGATCAGGGTAGGTAAA +
Preference number: 5 (lower is better)
Translates to: DSQFSMSGGPWDLQSDECLKHQV*VIRVGK
Trigger: TTTACCTACCCTGATCACCAAAACCTGATGTTTTAA...ACATTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp TGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTTCAGGCAAGGAGACTACTaGCCTTACTGTCATATTATT +
Preference number: 5 (lower is better)
Translates to: WRFKFQPIQLQPYILLSFRQGDY*PYCHII
Trigger: AATAATATGACAGTAAGGCAAGTAGTCTCCTTGCCT...GAAAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp ATCATGATAGTAGGCTATAACTCAAGTTTCAATGCCACGATGGTCGTGCTTTCTGTTCTTGACCACGTCTaGTCAATTCCAAAAGCATTT +
Preference number: 5 (lower is better)
Translates to: IMIVGYNSSFNATMVVLSVLDHV*SIPKAF
Trigger: AAATGCTTTTGGAATTGACAAGACGTGGTCAAGAAC...AGAAAGCACGACCATCGTGGCATTGAAACTTGAGTTATAGCCTACTATCATGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS-3UTR CAA 90 bp TGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGCAGTTAAAACATCAGGTTTaGGTGATCAGGGTAGGTAAA +
Preference number: 5 (lower is better)
Translates to: CTYFEDSQRQHFYKVELQLKHQV*VIRVGK
Trigger: TTTACCTACCCTGATCACCAAAACCTGATGTTTTAA...CTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp AGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCAAGGCAAGGAGACTACTaGCCTTACTGTCATATTATT +
Preference number: 5 (lower is better)
Translates to: SLLIEKDEILRGLRAKKSRQGDY*PYCHII
Trigger: AATAATATGACAGTAAGGCAAGTAGTCTCCTTGCCT...TGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp CTAAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACACACAAACAGGCAAGGAGACTACTaGCCTTACTGTCATATTATT +
Preference number: 5 (lower is better)
Translates to: LKHRTKTRYRIKLERHTNRQGDY*PYCHII
Trigger: AATAATATGACAGTAAGGCAAGTAGTCTCCTTGCCT...GTTTGTGTGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp GTGAACCAGAAGGTCAACAGTTGCATTTCTTCATCTAGAATGTTCTCTAGAAGGAGGCAAGGAGACTACTaGCCTTACTGTCATATTATT +
Preference number: 5 (lower is better)
Translates to: VNQKVNSCISSSRMFSRRRQGDY*PYCHII
Trigger: AATAATATGACAGTAAGGCAAGTAGTCTCCTTGCCT...CCTTCTAGAGAACATTCTAGATGAAGAAATGCAACTGTTGACCTTCTGGTTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CAA 90 bp AGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCACTGATTAGGACTATTTaGGTTTATTACCCTGGCATT +
Preference number: 5 (lower is better)
Translates to: SLLIEKDEILRGLRAKKSLIRTI*VYYPGI
Trigger: AATGCCAGGGTAATAAACCAAAATAGTCCTAATCAG...TGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS TCA 72 bp GCGGCAGTTGCTTCCGACAGGGTCCCCCAGCGGCGGTaGGTGCTCCGACCCGCGGCCCTAATCTACCGCCGC +
Preference number: 6 (lower is better)
Translates to: AAVASDRVPQRR*VLRPAALIYRR
Trigger: GCGGCGGTAGATTAGGGCCGCGGGTCGGAGCACTCACCGCCGCTGGGGGACCCTGTCGGAAGCAACTGCCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000464649.1
ENST00000493680.5
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS TCA 72 bp GCGGCCCTAATCTACCGCCGCCGCCATGTTGGAGGGTaGGGTCACCCCGGCGTGCCTTCGTCACGGCCGGCG +
Preference number: 6 (lower is better)
Translates to: AALIYRRRHVGG*GHPGVPSSRPA
Trigger: CGCCGGCCGTGACGAAGGCACGCCGGGGTGACCTCACCCTCCAACATGGCGGCGGCGGTAGATTAGGGCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS CCA 72 bp CCGACCCGCGGCCCTAATCTACCGCCGCCGCCATGTTaGAGGGTGAGGTCACCCCGGCGTGCCTTCGTCACG +
Preference number: 6 (lower is better)
Translates to: PTRGPNLPPPPC*RVRSPRRAFVT
Trigger: CGTGACGAAGGCACGCCGGGGTGACCTCACCCTCCAACATGGCGGCGGCGGTAGATTAGGGCCGCGGGTCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS TCA 72 bp ACCAACGGAGGCCCCGGAGGTCTCTCCGTCCAGATGTaGCCTGAAGACCCAAACCCTCCTAGCCCGCCCAAA +
Preference number: 6 (lower is better)
Translates to: TNGGPGGLSVQM*PEDPNPPSPPK
Trigger: TTTGGGCGGGCTAGGAGGGTTTGGGTCTTCAGGTCACATCTGGACGGAGAGACCTCCGGGGCCTCCGTTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000337612.9
ENST00000399781.5
ENST00000399782.5
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS CCA 72 bp CGAGGGGTTGGGATTCTGACCGGCTGGTCGCTGTGTTaGAGGAAGGGCAGGCGATTCCAGGGAAAGAAGCCT +
Preference number: 6 (lower is better)
Translates to: RGVGILTGWSLC*RKGRRFQGKKP
Trigger: AGGCTTCTTTCCCTGGAATCGCCTGCCCTTCCTCCAACACAGCGACCAGCCGGTCAGAATCCCAACCCCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399781.5
ENST00000399782.5
CDS TCA 72 bp TCTCAGATCATTTCCGGAGTCGAGGGGTTGGGATTCTaGCCGGCTGGTCGCTGTGTTGGAGGAAGGGCAGGC +
Preference number: 6 (lower is better)
Translates to: SQIISGVEGLGF*PAGRCVGGRAG
Trigger: GCCTGCCCTTCCTCCAACACAGCGACCAGCCGGTCAGAATCCCAACCCCTCGACTCCGGAAATGATCTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399781.5
ENST00000399782.5
CDS CCA 72 bp GTTGGGAAGGAATTCCGGGGAGGGAATATAGCGGGGTaGTGTAGAGAGGTCCTCCTAGGCGAAGGGAACTGG +
Preference number: 6 (lower is better)
Translates to: VGKEFRGGNIAG*CREVLLGEGNW
Trigger: CCAGTTCCCTTCGCCTAGGAGGACCTCTCTACACCACCCCGCTATATTCCCTCCCCGGAATTCCTTCCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399781.5
ENST00000399782.5
CDS CCA 72 bp ACGACAGCCTCGATGTTCGCCACTAGTTGGGGCAGATaGTCCTTGAAGGTTGGGAAGGAATTCCGGGGAGGG +
Preference number: 6 (lower is better)
Translates to: TTASMFATSWGR*SLKVGKEFRGG
Trigger: CCCTCCCCGGAATTCCTTCCCAACCTTCAAGGACCATCTGCCCCAACTAGTGGCGAACATCGAGGCTGTCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399781.5
ENST00000399782.5
CDS CCA 72 bp GTTCCGTCTCTCAGATCATTTCCGGAGTCGAGGGGTTaGGATTCTGACCGGCTGGTCGCTGTGTTGGAGGAA +
Preference number: 6 (lower is better)
Translates to: VPSLRSFPESRG*DSDRLVAVLEE
Trigger: TTCCTCCAACACAGCGACCAGCCGGTCAGAATCCCAACCCCTCGACTCCGGAAATGATCTGAGAGACGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399781.5
ENST00000399782.5
CDS GCA 72 bp TGGAGGAAGGGCAGGCGATTCCAGGGAAAGAAGCCTTaGTGCATGCACAGGCTATGTTCAGTTCCACAAACA +
Preference number: 6 (lower is better)
Translates to: WRKGRRFQGKKP*CMHRLCSVPQT
Trigger: TGTTTGTGGAACTGAACATAGCCTGTGCATGCAGCAAGGCTTCTTTCCCTGGAATCGCCTGCCCTTCCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399781.5
ENST00000399782.5
CDS GCA 72 bp GAAGACCCAAACCCTCCTAGCCCGCCCAAATCTGATTaGGACGTTCGGAAGTTCCGTCTCTCAGATCATTTC +
Preference number: 6 (lower is better)
Translates to: EDPNPPSPPKSD*DVRKFRLSDHF
Trigger: GAAATGATCTGAGAGACGGAACTTCCGAACGTCGCAATCAGATTTGGGCGGGCTAGGAGGGTTTGGGTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399781.5
ENST00000399782.5
CDS CCA 72 bp TACACAGTCACGACAGCCTCGATGTTCGCCACTAGTTaGGGCAGATGGTCCTTGAAGGTTGGGAAGGAATTC +
Preference number: 6 (lower is better)
Translates to: YTVTTASMFATS*GRWSLKVGKEF
Trigger: GAATTCCTTCCCAACCTTCAAGGACCATCTGCCCCAACTAGTGGCGAACATCGAGGCTGTCGTGACTGTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399781.5
ENST00000399782.5
CDS CAA 72 bp TTGGAGGAAGGGCAGGCGATTCCAGGGAAAGAAGCCTaGCTGCATGCACAGGCTATGTTCAGTTCCACAAAC +
Preference number: 6 (lower is better)
Translates to: LEEGQAIPGKEA*LHAQAMFSSTN
Trigger: GTTTGTGGAACTGAACATAGCCTGTGCATGCAGCAAGGCTTCTTTCCCTGGAATCGCCTGCCCTTCCTCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399781.5
ENST00000399782.5
CDS TCA 72 bp ATCTTCTGCAGTGATTCCAGGGTATTCCTCCTCCTCTaGCTCAAGACTAAACACAGTGCCTGGCTCAGGAGC +
Preference number: 6 (lower is better)
Translates to: IFCSDSRVFLLL*LKTKHSAWLRS
Trigger: GCTCCTGAGCCAGGCACTGTGTTTAGTCTTGAGTCAGAGGAGGAGGAATACCCTGGAATCACTGCAGAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355028.4
CDS GCA 72 bp AGGAAGGGCAGGCGATTCCAGGGAAAGAAGCCTTGCTaGATGCACAGGCTATGTTCAGTTCCACAAACATGT +
Preference number: 6 (lower is better)
Translates to: RKGRRFQGKKPC*MHRLCSVPQTC
Trigger: ACATGTTTGTGGAACTGAACATAGCCTGTGCATGCAGCAAGGCTTCTTTCCCTGGAATCGCCTGCCCTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399781.5
ENST00000399782.5
CDS TCA 72 bp CACTTTTTCTCCAAGATGGGCCAAGCAGTCTTCCATTaGGCTTTCTGGATTGGCAGGGCTGAACACTGGAGA +
Preference number: 6 (lower is better)
Translates to: HFFSKMGQAVFH*AFWIGRAEHWR
Trigger: TCTCCAGTGTTCAGCCCTGCCAATCCAGAAAGCTCAATGGAAGACTGCTTGGCCCATCTTGGAGAAAAAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000399782.5
ENST00000418951.6
ENST00000464649.1
ENST00000493680.5
ENST00000611738.4
ENST00000618481.4
CDS GCA 72 bp CTGATATGTCACTGGCTGGCTCAGGAGCATTTGCAATaGTTTATGGAGAGGCTCTTTCAGTTCCTGGGACAC +
Preference number: 6 (lower is better)
Translates to: LICHWLAQEHLQ*FMERLFQFLGH
Trigger: GTGTCCCAGGAACTGAAAGAGCCTCTCCATAAAGCATTGCAAATGCTCCTGAGCCAGCCAGTGACATATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317582.10
ENST00000399782.5
ENST00000493680.5
ENST00000611738.4
ENST00000618481.4
CDS GCA 72 bp CCAGAGGCACCAAAATTGGCTCAGGAGCATTTGCAATaGTTTATGGAGAGGCTCTTTCAGTTCCTGGGACAC +
Preference number: 6 (lower is better)
Translates to: PEAPKLAQEHLQ*FMERLFQFLGH
Trigger: GTGTCCCAGGAACTGAAAGAGCCTCTCCATAAAGCATTGCAAATGCTCCTGAGCCAATTTTGGTGCCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399777.1
ENST00000418951.6
CDS CAA 72 bp TCTGACTCAAGACTAAACACAGTGCCCACAGTGGACTaGCTCTGCCCTTTCCAGGAGACAGACAGACTTCTA +
Preference number: 6 (lower is better)
Translates to: SDSRLNTVPTVD*LCPFQETDRLL
Trigger: TAGAAGTCTGTCTGTCTCCTGGAAAGGGCAGAGCAAGTCCACTGTGGGCACTGTGTTTAGTCTTGAGTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485631.1
CDS CAA 90 bp CAGAGGCGCCAGGGCATGAAGGAAGTCTTAACTAGTAACCCGCTTTaGTTAACAGTACCTGGAACACACAGCGCCTGGAACATACTTAAC +
Preference number: 6 (lower is better)
Translates to: QRRQGMKEVLTSNPL*LTVPGTHSAWNILN
Trigger: GTTAAGTATGTTCCAGGCGCTGTGTGTTCCAGGTACTGTTAACAAAAGCGGGTTACTAGTTAAGACTTCCTTCATGCCCTGGCGCCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399781.5
ENST00000399782.5
CDS TCA 72 bp ATCTTCTGCAGTGATTCCAGGGTATTCCTCCTCCTCTaGCTCAAGACTAAACACAGTGCCCACAGTGGACTT +
Preference number: 6 (lower is better)
Translates to: IFCSDSRVFLLL*LKTKHSAHSGL
Trigger: AAGTCCACTGTGGGCACTGTGTTTAGTCTTGAGTCAGAGGAGGAGGAATACCCTGGAATCACTGCAGAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485631.1
CDS TCA 72 bp ATCTTCTGCAGTGATTCCAGGGTATTCCTCCTCCTCTaGCTCAAGACTAAACACAGTGCCCTTATTCCAGCC +
Preference number: 6 (lower is better)
Translates to: IFCSDSRVFLLL*LKTKHSALIPA
Trigger: GGCTGGAATAAGGGCACTGTGTTTAGTCTTGAGTCAGAGGAGGAGGAATACCCTGGAATCACTGCAGAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611738.4
CDS CCA 72 bp GGCTCTTTCAGTTCCTGGGACACTTTTTCTCCAAGATaGGCCAAGCAGTCTTCCATTGAGCTTTCTGGATTG +
Preference number: 6 (lower is better)
Translates to: GSFSSWDTFSPR*AKQSSIELSGL
Trigger: CAATCCAGAAAGCTCAATGGAAGACTGCTTGGCCCATCTTGGAGAAAAAGTGTCCCAGGAACTGAAAGAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000399782.5
ENST00000418951.6
ENST00000464649.1
ENST00000493680.5
ENST00000611738.4
ENST00000618481.4
CDS CCA 72 bp GTCACTGGCTGGCTCAGGAGCATTTGCAATGCTTTATaGAGAGGCTCTTTCAGTTCCTGGGACACTTTTTCT +
Preference number: 6 (lower is better)
Translates to: VTGWLRSICNAL*RGSFSSWDTFS
Trigger: AGAAAAAGTGTCCCAGGAACTGAAAGAGCCTCTCCATAAAGCATTGCAAATGCTCCTGAGCCAGCCAGTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317582.10
ENST00000399782.5
ENST00000493680.5
ENST00000611738.4
ENST00000618481.4
CDS CCA 72 bp CACAGTGCCTGGCTCAGGAGCATTTGCAATGCTTTATaGAGAGGCTCTTTCAGTTCCTGGGACACTTTTTCT +
Preference number: 6 (lower is better)
Translates to: HSAWLRSICNAL*RGSFSSWDTFS
Trigger: AGAAAAAGTGTCCCAGGAACTGAAAGAGCCTCTCCATAAAGCATTGCAAATGCTCCTGAGCCAGGCACTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355028.4
CDS CAA 72 bp AATCCCAGAGGCACAGTAGAAGAGGACGCCATTGAATaGGCTGGTGAGGCTCCAAAAAGGTCTACTTATGGA +
Preference number: 6 (lower is better)
Translates to: NPRGTVEEDAIE*AGEAPKRSTYG
Trigger: TCCATAAGTAGACCTTTTTGGAGCCTCACCAGCCAATTCAATGGCGTCCTCTTCTACTGTGCCTCTGGGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399781.5
ENST00000399782.5
ENST00000418951.6
ENST00000493680.5
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000616863.4
CDS CAA 72 bp CAGGGCATGAAGGAAGTCTTAACTAGTAACCCGCTTTaGTTAACAGTACCTGGAACACACAGCGCCTGGAAC +
Preference number: 6 (lower is better)
Translates to: QGMKEVLTSNPL*LTVPGTHSAWN
Trigger: GTTCCAGGCGCTGTGTGTTCCAGGTACTGTTAACAAAAGCGGGTTACTAGTTAAGACTTCCTTCATGCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399781.5
ENST00000399782.5
CDS CCA 72 bp AGCATCGTTTGGCTCAGGAGCATTTGCAATGCTTTATaGAGAGGCTCTTTCAGTTCCTGGGACACTTTTTCT +
Preference number: 6 (lower is better)
Translates to: SIVWLRSICNAL*RGSFSSWDTFS
Trigger: AGAAAAAGTGTCCCAGGAACTGAAAGAGCCTCTCCATAAAGCATTGCAAATGCTCCTGAGCCAAACGATGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464649.1
CDS TCA 72 bp ATCTTCTGCAGTGATTCCAGGGTATTCCTCCTCCTCTaGCTCAAGACTAAACACAGTGCCCTTCAGAAATTT +
Preference number: 6 (lower is better)
Translates to: IFCSDSRVFLLL*LKTKHSALQKF
Trigger: AAATTTCTGAAGGGCACTGTGTTTAGTCTTGAGTCAGAGGAGGAGGAATACCCTGGAATCACTGCAGAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616863.4
CDS CCA 72 bp CACCAAAATTGGCTCAGGAGCATTTGCAATGCTTTATaGAGAGGCTCTTTCAGTTCCTGGGACACTTTTTCT +
Preference number: 6 (lower is better)
Translates to: HQNWLRSICNAL*RGSFSSWDTFS
Trigger: AGAAAAAGTGTCCCAGGAACTGAAAGAGCCTCTCCATAAAGCATTGCAAATGCTCCTGAGCCAATTTTGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399777.1
ENST00000418951.6
CDS TCA 72 bp CTTGCAGCTTCTCTTGAGAGAGGAGTCCCAAGTAGCTaGGAACAACATACTTTGTTTCATAGTGAAATCCCA +
Preference number: 6 (lower is better)
Translates to: LAASLERGVPSS*EQHTLFHSEIP
Trigger: TGGGATTTCACTATGAAACAAAGTATGTTGTTCTCAGCTACTTGGGACTCCTCTCTCAAGAGAAGCTGCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399781.5
ENST00000399782.5
ENST00000418951.6
ENST00000493680.5
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000616863.4
CDS CAA 90 bp TTCAAGAAAATATTTTTAATATATAACAGCTCATACCCAGCCACCTaGCTGAATGATGTACTCTGCCGAATAGTCCTCCAGGTATGTCAC +
Preference number: 6 (lower is better)
Translates to: FKKIFLIYNSSYPAT*LNDVLCRIVLQVCH
Trigger: GTGACATACCTGGAGGACTATTCGGCAGAGTACATCATTCAGCAAGGTGGCTGGGTATGAGCTGTTATATATTAAAAATATTTTCTTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399782.5
ENST00000493680.5
CDS CAA 72 bp TTTGCTAAACTGACAAAGATTATTCAACATACTGTTTaGTACAAGACGTGGCTTTTCACACTAGTATGCACT +
Preference number: 6 (lower is better)
Translates to: FAKLTKIIQHTV*YKTWLFTLVCT
Trigger: AGTGCATACTAGTGTGAAAAGCCACGTCTTGTACAAAACAGTATGTTGAATAATCTTTGTCAGTTTAGCAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479296.1