RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BCL2 (Homo sapiens)

Ensembl gene IDs: ENSG00000171791

Ensembl transcript IDs: ENST00000333681.5, ENST00000398117.1, ENST00000589955.2, ENST00000590515.1, ENST00000677227.1, ENST00000677635.1, ENST00000678134.1, ENST00000678301.1, ENST00000678349.1

Found 1261 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGCGTAAGCACCACTGCATTTCAGGAAGACCCTGAAGGACAGCCATaGGAAAGCCCCCGCGGAAGGAGGGCAGGAGGGCTCTGGGTGGGT +
Preference number: 1 (lower is better)
Translates to: SVSTTAFQEDPEGQP*ESPRGRRAGGLWVG
Trigger: ACCCACCCAGAGCCCTCCTGCCCTCCTTCCGCGGGGGCTTTCTCATGGCTGTCCTTCAGGGTCTTCCTGAAATGCAGTGGTGCTTACGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR GCA 90 bp CTCAGTTCCAGGACCAGGCCTCCAAGCTGGGACACAGGCAGGTTCTaGGGACTTCGGTCTCCTAAAAGCAGGCACTTGTGGCGGCCTGAT +
Preference number: 1 (lower is better)
Translates to: LSSRTRPPSWDTGRF*GLRSPKSRHLWRPD
Trigger: ATCAGGCCGCCACAAGTGCCTGCTTTTAGGAGACCGAAGTCCGCAGAACCTGCCTGTGTCCCAGCTTGGAGGCCTGGTCCTGGAACTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR GCA 90 bp GACCCGATGGCCATAGACCCTGTCAGCTGTCATTCTGGCCTCTCTTaGGGAGTATTTGTGCAGCGAGGGACTGGGAGGGCCGAGGAGGTT +
Preference number: 1 (lower is better)
Translates to: DPMAIDPVSCHSGLS*GVFVQRGTGRAEEV
Trigger: AACCTCCTCGGCCCTCCCAGTCCCTCGCTGCACAAATACTCCGCAAGAGAGGCCAGAATGACAGCTGACAGGGTCTATGGCCATCGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR CCA 90 bp TGGGCCAAGGCCACACAGCCAACGTGCCATGTGCTACAGCCAAAATaGGCCGTGGCCATTGCCTCTCCTCACGTTCCCAGCCTTCACCAT +
Preference number: 1 (lower is better)
Translates to: WAKATQPTCHVLQPK*AVAIASPHVPSLHH
Trigger: ATGGTGAAGGCTGGGAACGTGAGGAGAGGCAATGGCCACGGCCCATTTTGGCTGTAGCACATGGCACGTTGGCTGTGTGGCCTTGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR CCA 90 bp CTTCGGAGACGACCCGATGGCCATAGACCCTGTCAGCTGTCATTCTaGCCTCTCTTGCGGAGTATTTGTGCAGCGAGGGACTGGGAGGGC +
Preference number: 1 (lower is better)
Translates to: LRRRPDGHRPCQLSF*PLLRSICAARDWEG
Trigger: GCCCTCCCAGTCCCTCGCTGCACAAATACTCCGCAAGAGAGGCCAGAATGACAGCTGACAGGGTCTATGGCCATCGGGTCGTCTCCGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR TCA 90 bp GCTTTGTCCAGAGGAGGAGGTAGGGACGCCGGGAAGCAACAACTCTaGTTTTATTTCGCCGGCTCCACAGCCTCCCATTGCCCCAGGAGC +
Preference number: 1 (lower is better)
Translates to: ALSRGGGRDAGKQQL*FYFAGSTASHCPRS
Trigger: GCTCCTGGGGCAATGGGAGGCTGTGGAGCCGGCGAAATAAAATCAGAGTTGTTGCTTCCCGGCGTCCCTACCTCCTCCTCTGGACAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589955.2
ENST00000678349.1
3UTR CCA 90 bp AGGCCACACAGCCAACGTGCCATGTGCTACAGCCAAAATGGGCCGTaGCCATTGCCTCTCCTCACGTTCCCAGCCTTCACCATGTCCTTC +
Preference number: 1 (lower is better)
Translates to: RPHSQRAMCYSQNGP*PLPLLTFPAFTMSF
Trigger: GAAGGACATGGTGAAGGCTGGGAACGTGAGGAGAGGCAATGGCCACGGCCCATTTTGGCTGTAGCACATGGCACGTTGGCTGTGTGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR GCA 90 bp ACAGCCAACGTGCCATGTGCTACAGCCAAAATGGGCCGTGGCCATTaGCTCTCCTCACGTTCCCAGCCTTCACCATGTCCTTCTGATAGG +
Preference number: 1 (lower is better)
Translates to: TANVPCATAKMGRGH*LSSRSQPSPCPSDR
Trigger: CCTATCAGAAGGACATGGTGAAGGCTGGGAACGTGAGGAGAGGCAATGGCCACGGCCCATTTTGGCTGTAGCACATGGCACGTTGGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR GCA 90 bp TTTAAACTCACAGGTGGGCCAAGGCCACACAGCCAACGTGCCATGTaGTACAGCCAAAATGGGCCGTGGCCATTGCCTCTCCTCACGTTC +
Preference number: 1 (lower is better)
Translates to: FKLTGGPRPHSQRAM*YSQNGPWPLPLLTF
Trigger: GAACGTGAGGAGAGGCAATGGCCACGGCCCATTTTGGCTGTAGCACATGGCACGTTGGCTGTGTGGCCTTGGCCCACCTGTGAGTTTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR CCA 90 bp CCCGCCGGGGAGGTCTGGCTTCATACCACAGGTTTCCTGCTTTCTTaGTGGAGCGTAAGCACCACTGCATTTCAGGAAGACCCTGAAGGA +
Preference number: 1 (lower is better)
Translates to: PAGEVWLHTTGFLLS*WSVSTTAFQEDPEG
Trigger: TCCTTCAGGGTCTTCCTGAAATGCAGTGGTGCTTACGCTCCACCAAGAAAGCAGGAAACCTGTGGTATGAAGCCAGACCTCCCCGGCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR CCA 90 bp CTGTCATTCTGGCCTCTCTTGCGGAGTATTTGTGCAGCGAGGGACTaGGAGGGCCGAGGAGGTTCTCAGATGTTCTTCTCCTTTTGGGGC +
Preference number: 1 (lower is better)
Translates to: LSFWPLLRSICAARD*EGRGGSQMFFSFWG
Trigger: GCCCCAAAAGGAGAAGAACATCTGAGAACCTCCTCGGCCCTCCCAGTCCCTCGCTGCACAAATACTCCGCAAGAGAGGCCAGAATGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR TCA 90 bp GGCCCAGCCACACCCCTCTACTGCTCTTTCTTGACAGTGGAATTCTaGGCTCCATCAGCTTCCAGACATTCGGAGACCACACTGCCCTGT +
Preference number: 1 (lower is better)
Translates to: GPATPLYCSFLTVEF*APSASRHSETTLPC
Trigger: ACAGGGCAGTGTGGTCTCCGAATGTCTGGAAGCTGATGGAGCTCAGAATTCCACTGTCAAGAAAGAGCAGTAGAGGGGTGTGGCTGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR CCA 90 bp GCCGGGGAGGTCTGGCTTCATACCACAGGTTTCCTGCTTTCTTGGTaGAGCGTAAGCACCACTGCATTTCAGGAAGACCCTGAAGGACAG +
Preference number: 1 (lower is better)
Translates to: AGEVWLHTTGFLLSW*SVSTTAFQEDPEGQ
Trigger: CTGTCCTTCAGGGTCTTCCTGAAATGCAGTGGTGCTTACGCTCCACCAAGAAAGCAGGAAACCTGTGGTATGAAGCCAGACCTCCCCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR TCA 90 bp TCAAGCCAGGAAACGGTGGTCCTGGGGACTCCTGGACCTTCAGCTTaGGAAACACTGAAGGGGTACCATTTACCACCACATCCTACTGGA +
Preference number: 1 (lower is better)
Translates to: SSQETVVLGTPGPSA*ETLKGYHLPPHPTG
Trigger: TCCAGTAGGATGTGGTGGTAAATGGTACCCCTTCAGTGTTTCTCAAGCTGAAGGTCCAGGAGTCCCCAGGACCACCGTTTCCTGGCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589955.2
ENST00000678349.1
3UTR CCA 90 bp GTTTCAGGGGAGCTTGTTTGGGATGCAGACTGTCAAGACCCAACCTaGTATCTGGTTCATAAGCAGTCCCTGAAACCTCCCTCCGGTTCC +
Preference number: 1 (lower is better)
Translates to: VSGELVWDADCQDPT*YLVHKQSLKPPSGS
Trigger: GGAACCGGAGGGAGGTTTCAGGGACTGCTTATGAACCAGATACCAGGTTGGGTCTTGACAGTCTGCATCCCAAACAAGCTCCCCTGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589955.2
ENST00000678349.1
3UTR CCA 90 bp CAAAGCCATAGCCTGATACTCCTCAGGACACCTCATCACGCCCACTaGGAACATGGCACACACTGGAGATTCCAGTCCAAGGACTTTGGA +
Preference number: 1 (lower is better)
Translates to: QSHSLILLRTPHHAH*EHGTHWRFQSKDFG
Trigger: TCCAAAGTCCTTGGACTGGAATCTCCAGTGTGTGCCATGTTCCCAGTGGGCGTGATGAGGTGTCCTGAGGAGTATCAGGCTATGGCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR GCA 90 bp TGTGACTTTATTCCAAATCTTAAGCCTGCCAGAGTTTTCTGCCCCTaGCAAATCTTCGGAGACGACCCGATGGCCATAGACCCTGTCAGC +
Preference number: 1 (lower is better)
Translates to: CDFIPNLKPARVFCP*QIFGDDPMAIDPVS
Trigger: GCTGACAGGGTCTATGGCCATCGGGTCGTCTCCGAAGATTTGGCAGGGGCAGAAAACTCTGGCAGGCTTAAGATTTGGAATAAAGTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR TCA 90 bp AGTACTGGCGACAAACAGGCACTCCGAGCTTCTTGGAGAACATTATaGATAATCCCAAAGAGAACTGAGCTCCAGAAGGGGCGGGGCTTT +
Preference number: 1 (lower is better)
Translates to: STGDKQALRASWRTL*IIPKRTELQKGRGF
Trigger: AAAGCCCCGCCCCTTCTGGAGCTCAGTTCTCTTTGGGATTATTCATAATGTTCTCCAAGAAGCTCGGAGTGCCTGTTTGTCGCCAGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678134.1
3UTR CCA 90 bp TTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGGTGCTTaGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGATGGGA +
Preference number: 1 (lower is better)
Translates to: FTGTEHPGGATRSGA*QLVVGFPKTGVLMG
Trigger: TCCCATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR CCA 90 bp CAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTaGAGCCACACGAAGCGGTGCTTGGCAATTAGTGGTCGGATTTCC +
Preference number: 1 (lower is better)
Translates to: QHGKRIYVYRHRTSR*SHTKRCLAISGRIS
Trigger: GGAAATCCGACCACTAATTGCCAAGCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR GCA 90 bp GCTTCTTTTAGGATTTGTGACCCTCTCCAAAGTCATTTAAAGCCTTaGTTTAAACTCACAGGTGGGCCAAGGCCACACAGCCAACGTGCC +
Preference number: 1 (lower is better)
Translates to: ASFRICDPLQSHLKP*FKLTGGPRPHSQRA
Trigger: GGCACGTTGGCTGTGTGGCCTTGGCCCACCTGTGAGTTTAAAGCAAGGCTTTAAATGACTTTGGAGAGGGTCACAAATCCTAAAAGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR CCA 90 bp ACTTGCAGTCTAAAGCCTGGAGTATTCAGTGTAGTATTCAGGAGATaGGCTAATCCACGGAGCCCTGGGGACAGTGCAGATTATTGTCAC +
Preference number: 1 (lower is better)
Translates to: TCSLKPGVFSVVFRR*ANPRSPGDSADYCH
Trigger: GTGACAATAATCTGCACTGTCCCCAGGGCTCCGTGGATTAGCCCATCTCCTGAATACTACACTGAATACTCCAGGCTTTAGACTGCAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR GCA 90 bp TATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGGTaGTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGAT +
Preference number: 1 (lower is better)
Translates to: YVYRHRTSRWSHTKR*LAISGRISKDRSFD
Trigger: ATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR GCA 90 bp AGTTTAGAGGGTCACTCTCCATCACCTGCCCAAAACTCAATCCCTTaGCTGCAAGAGTCCCTTTGTCTTAAAGAAGCTGCAAGGTCACTA +
Preference number: 1 (lower is better)
Translates to: SLEGHSPSPAQNSIP*LQESLCLKEAARSL
Trigger: TAGTGACCTTGCAGCTTCTTTAAGACAAAGGGACTCTTGCAGGCAAGGGATTGAGTTTTGGGCAGGTGATGGAGAGTGACCCTCTAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR CCA 90 bp TTTTTCCATCCGTCTGCTCTTCAGATGGTGATCCGGCCAACAACATaGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAG +
Preference number: 1 (lower is better)
Translates to: FFHPSALQMVIRPTT*KANLCLQAQNIQVE
Trigger: CTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGAAGAGCAGACGGATGGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR TCA 90 bp TACAAAGCTCCGGGGGATGCATGTGCTACTGTCTATAAGCCACACTaGGCAGCAAGGTATCCACATTTTCTAGAATTGCTTCTCTCTCAC +
Preference number: 1 (lower is better)
Translates to: YKAPGDACATVYKPH*AARYPHFLELLLSH
Trigger: GTGAGAGAGAAGCAATTCTAGAAAATGTGGATACCTTGCTGCTCAGTGTGGCTTATAGACAGTAGCACATGCATCCCCCGGAGCTTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR CCA 90 bp ATCTTTGGATCTCCACGACTAGCAAGCAAGTTAAAGACTTTTAGATaGCAGGCGTTATCGGTCAGGTTGGGAGTGAACGCTTTGTCCAGA +
Preference number: 1 (lower is better)
Translates to: IFGSPRLASKLKTFR*QALSVRLGVNALSR
Trigger: TCTGGACAAAGCGTTCACTCCCAACCTGACCGATAACGCCTGCCATCTAAAAGTCTTTAACTTGCTTGCTAGTCGTGGAGATCCAAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589955.2
ENST00000678349.1
3UTR TCA 90 bp AAAGCTCCTCAGTGGCCAGTGACATCCAGGTTTTTCTTAGGTAGCTaGGACTCAGGGCTTATCTCACCTTCTCAGAATGCTTTTGAAGAA +
Preference number: 1 (lower is better)
Translates to: KAPQWPVTSRFFLGS*DSGLISPSQNAFEE
Trigger: TTCTTCAAAAGCATTCTGAGAAGGTGAGATAAGCCCTGAGTCTCAGCTACCTAAGAAAAACCTGGATGTCACTGGCCACTGAGGAGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR TCA 90 bp TGGGGCAGTCCAGATGAACCGGTACAGTACCATTCATGCTCCATCTaGTTTTCTTTGCATCCAGTGAGATGCATATTTCATGATTGTCCA +
Preference number: 1 (lower is better)
Translates to: WGSPDEPVQYHSCSI*FSLHPVRCIFHDCP
Trigger: TGGACAATCATGAAATATGCATCTCACTGGATGCAAAGAAAATCAGATGGAGCATGAATGGTACTGTACCGGTTCATCTGGACTGCCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR TCA 90 bp CAGCTTGGTATGCAGAACAACCTTGTTGTTGATAGGATGTTTGCTTaGAGTTATTTTTCTGGGGCAGTCCAGATGAACCGGTACAGTACC +
Preference number: 1 (lower is better)
Translates to: QLGMQNNLVVDRMFA*SYFSGAVQMNRYST
Trigger: GGTACTGTACCGGTTCATCTGGACTGCCCCAGAAAAATAACTTCAAGCAAACATCCTATCAACAACAAGGTTGTTCTGCATACCAAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR TCA 90 bp TTTATACCATTGCACTGCCAAACGGAGCTGCACTTTGAGCCATGCTaGTGTCTCTGGAATCTAAAGGTCGTACCACAAACTTCAAAATGT +
Preference number: 1 (lower is better)
Translates to: FIPLHCQTELHFEPC*CLWNLKVVPQTSKC
Trigger: ACATTTTGAAGTTTGTGGTACGACCTTTAGATTCCAGAGACATCAGCATGGCTCAAAGTGCAGCTCCGTTTGGCAGTGCAATGGTATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR CCA 90 bp ACTGTCACAATAAACAATTCTGTTGACGTGGAAATGCACATGACTTaGTTGAAACAAAGCTCCTCAGTGGCCAGTGACATCCAGGTTTTT +
Preference number: 1 (lower is better)
Translates to: TVTINNSVDVEMHMT*LKQSSSVASDIQVF
Trigger: AAAAACCTGGATGTCACTGGCCACTGAGGAGCTTTGTTTCAACCAAGTCATGTGCATTTCCACGTCAACAGAATTGTTTATTGTGACAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR TCA 90 bp AGGATCTTACCACGTGGAGCATACTGCAAACTGACTCCATTAAAATaGTTTTGGCAGGATAGCAGCACAGGATTGGATATTCCATATTCA +
Preference number: 1 (lower is better)
Translates to: RILPRGAYCKLTPLK*FWQDSSTGLDIPYS
Trigger: TGAATATGGAATATCCAATCCTGTGCTGCTATCCTGCCAAAATCATTTTAATGGAGTCAGTTTGCAGTATGCTCCACGTGGTAAGATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR TCA 90 bp CACAGAGAGGTAAGTGAGCTGTGGAGAGAATGTTGGCGTCTTGTTTaGACTAAATTGAGGTGCTTCCTTAATTCTGTGACTTTATTCCAA +
Preference number: 1 (lower is better)
Translates to: HREVSELWRECWRLV*TKLRCFLNSVTLFQ
Trigger: TTGGAATAAAGTCACAGAATTAAGGAAGCACCTCAATTTAGTTCAAACAAGACGCCAACATTCTCTCCACAGCTCACTTACCTCTCTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR TCA 90 bp GGTCAAAGGGACAACAGATATAACTGTCACAATAAACAATTCTGTTaGCGTGGAAATGCACATGACTTGGTTGAAACAAAGCTCCTCAGT +
Preference number: 1 (lower is better)
Translates to: GQRDNRYNCHNKQFC*RGNAHDLVETKLLS
Trigger: ACTGAGGAGCTTTGTTTCAACCAAGTCATGTGCATTTCCACGTCAACAGAATTGTTTATTGTGACAGTTATATCTGTTGTCCCTTTGACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR GCA 90 bp AGCTTTGTTTCATGGTACATCACTGACAATGCATATTATTTCTACTaGTTTAGTGAACCTTTTGCATATTTGTTTGGGGCAGGCATGTTG +
Preference number: 1 (lower is better)
Translates to: SFVSWYITDNAYYFY*FSEPFAYLFGAGML
Trigger: CAACATGCCTGCCCCAAACAAATATGCAAAAGGTTCACTAAAGCAGTAGAAATAATATGCATTGTCAGTGATGTACCATGAAACAAAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR CCA 90 bp GATGCATATTTCATGATTGTCCAAGGTCATGGTTGTCCAAAGACATaGAACAGAATGATTCACTGGGTAAGACTAAAGGACTTGTATTAT +
Preference number: 1 (lower is better)
Translates to: DAYFMIVQGHGCPKT*NRMIHWVRLKDLYY
Trigger: ATAATACAAGTCCTTTAGTCTTACCCAGTGAATCATTCTGTTCCATGTCTTTGGACAACCATGACCTTGGACAATCATGAAATATGCATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR TCA 90 bp AATAGAGACTATTTGCAATTCTGTTCACTCAATAGATCCTGGAGGTaGAAGCTAGACATGTGTTGGGATTGCCCTGATTATTTACATTTA +
Preference number: 1 (lower is better)
Translates to: NRDYLQFCSLNRSWR*KLDMCWDCPDYLHL
Trigger: TAAATGTAAATAATCAGGGCAATCCCAACACATGTCTAGCTTTCACCTCCAGGATCTATTGAGTGAACAGAATTGCAAATAGTCTCTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR TCA 90 bp AGTCTTTATTTAATTTGTAGTCTTCTGGGACAATCTATCAGAGGCTaGTCATTCCAAGGACCTGATTTATCCATGTTATGGAACACAAAA +
Preference number: 1 (lower is better)
Translates to: SLYLICSLLGQSIRG*SFQGPDLSMLWNTK
Trigger: TTTTGTGTTCCATAACATGGATAAATCAGGTCCTTGGAATGATCAGCCTCTGATAGATTGTCCCAGAAGACTACAAATTAAATAAAGACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR-3UTR TCA 90 bp GCCACACAGCCAACGTGCCATGTGCTACAGCCAAAATGGGCCGTGGCCATTGCCGATAGGCACCCAGGGTaGTGCAAGCTCCCACCAGGG +
Preference number: 2 (lower is better)
Translates to: ATQPTCHVLQPKWAVAIADRHPG*CKLPPG
Trigger: CCCTGGTGGGAGCTTGCATCACCCTGGGTGCCTATC...GGCAATGGCCACGGCCCATTTTGGCTGTAGCACATGGCACGTTGGCTGTGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678134.1
ENST00000678349.1
3UTR CAA 90 bp CGACCCGATGGCCATAGACCCTGTCAGCTGTCATTCTGGCCTCTCTaGCGGAGTATTTGTGCAGCGAGGGACTGGGAGGGCCGAGGAGGT +
Preference number: 2 (lower is better)
Translates to: RPDGHRPCQLSFWPL*RSICAARDWEGRGG
Trigger: ACCTCCTCGGCCCTCCCAGTCCCTCGCTGCACAAATACTCCGCAAGAGAGGCCAGAATGACAGCTGACAGGGTCTATGGCCATCGGGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp TCACTTGTGGCCCAGATAGGCACCCAGGGTGATGCAAGCTCCCACCAGGGCCAAAATCCCAAAGAGAACTaGGCTCCAGAAGGGGCGGGG +
Preference number: 2 (lower is better)
Translates to: SLVAQIGTQGDASSHQGQNPKEN*APEGAG
Trigger: CCCCGCCCCTTCTGGAGCTCAGTTCTCTTTGGGATT...TTGGCCCTGGTGGGAGCTTGCATCACCCTGGGTGCCTATCTGGGCCACAAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678134.1
3UTR CAA 90 bp GACACAGGCAGGTTCTGCGGACTTCGGTCTCCTAAAAGCAGGCACTaGTGGCGGCCTGATGCTCTGGGTAACTCTAGCCTTCCTGATGCG +
Preference number: 2 (lower is better)
Translates to: DTGRFCGLRSPKSRH*WRPDALGNSSLPDA
Trigger: CGCATCAGGAAGGCTAGAGTTACCCAGAGCATCAGGCCGCCACAAGTGCCTGCTTTTAGGAGACCGAAGTCCGCAGAACCTGCCTGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CCA 90 bp GTCAGCTGTCATTCTGGCCTCTCTTGCGGAGTATTTGTGCAGCGAGGGACTGGGAGCCAAAATGGGCCGTaGCCATTGCCTCTCCTCACG +
Preference number: 2 (lower is better)
Translates to: VSCHSGLSCGVFVQRGTGSQNGP*PLPLLT
Trigger: CGTGAGGAGAGGCAATGGCCACGGCCCATTTTGGCT...CCCAGTCCCTCGCTGCACAAATACTCCGCAAGAGAGGCCAGAATGACAGCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp TCCTCACGTTCCCAGCCTTCACCATGTCCTTCTGATAGGAAGGGCCCAGGGCCTCTGCTCTTCAGATGGTaGTCCGGCCAACAACATGGA +
Preference number: 2 (lower is better)
Translates to: SSRSQPSPCPSDRKGPGPLLFRW*SGQQHG
Trigger: TCCATGTTGTTGGCCGGATCACCATCTGAAGAGCAG...AGGCCCTGGGCCCTTCCTATCAGAAGGACATGGTGAAGGCTGGGAACGTGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp GGCCATAGACCCTGTCAGCTGTCATTCTGGCCTCTCTTGCGGAGTATTTGTGCACTCCCATGCTCCACGTaGAAACGGGCCTACCTGGAG +
Preference number: 2 (lower is better)
Translates to: GHRPCQLSFWPLLRSICALPCST*KRAYLE
Trigger: CTCCAGGTAGGCCCGTTTTCACGTGGAGCATGGGAG...TGCACAAATACTCCGCAAGAGAGGCCAGAATGACAGCTGACAGGGTCTATGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CCA 90 bp GGGACTGGGAGGGCCGAGGAGGTTCTCAGATGTTCTTCTCCTTTTGGGGCTTTTGGCGGCCTGATGCTCTaGGTAACTCTAGCCTTCCTG +
Preference number: 2 (lower is better)
Translates to: GTGRAEEVLRCSSPFGAFGGLML*VTLAFL
Trigger: CAGGAAGGCTAGAGTTACCCAGAGCATCAGGCCGCC...AAAAGCCCCAAAAGGAGAAGAACATCTGAGAACCTCCTCGGCCCTCCCAGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CCA 90 bp GTGATACATGTCTTAAGAAGGGTCGTGGCTCCCATGCTCCACGTGAAAACGGGCCCTGTTGATCATCCCTaGAGGAGGCCAGTGAGGGCC +
Preference number: 2 (lower is better)
Translates to: VIHVLRRVVAPMLHVKTGPVDHP*RRPVRA
Trigger: GGCCCTCACTGGCCTCCTCCAGGGATGATCAACAGG...GCCCGTTTTCACGTGGAGCATGGGAGCCACGACCCTTCTTAAGACATGTATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CCA 90 bp CTCTCTTGCGGAGTATTTGTGCAGCGAGGGACTGGGAGGGCCGAGGAGGTTCTCTTCCTGCTTTCTTGGTaGAGCGTAAGCACCACTGCA +
Preference number: 2 (lower is better)
Translates to: LSCGVFVQRGTGRAEEVLFLLSW*SVSTTA
Trigger: TGCAGTGGTGCTTACGCTCCACCAAGAAAGCAGGAA...GAGAACCTCCTCGGCCCTCCCAGTCCCTCGCTGCACAAATACTCCGCAAGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CCA 90 bp TGCAGCGAGGGACTGGGAGGGCCGAGGAGGTTCTCAGATGTTCTTCTCCTTTTGGGTCCTGGGGACTCCTaGACCTTCAGCTTGAGAAAC +
Preference number: 2 (lower is better)
Translates to: CSEGLGGPRRFSDVLLLLGPGDS*TFSLRN
Trigger: GTTTCTCAAGCTGAAGGTCCAGGAGTCCCCAGGACC...CAAAAGGAGAAGAACATCTGAGAACCTCCTCGGCCCTCCCAGTCCCTCGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678349.1
3UTR-3UTR TCA 90 bp CTCTCTTGCGGAGTATTTGTGCAGCGAGGGACTGGGAGGGCCGAGGAGGTTCTCTTGACAGTGGAATTCTaGGCTCCATCAGCTTCCAGA +
Preference number: 2 (lower is better)
Translates to: LSCGVFVQRGTGRAEEVLLTVEF*APSASR
Trigger: TCTGGAAGCTGATGGAGCTCAGAATTCCACTGTCAA...GAGAACCTCCTCGGCCCTCCCAGTCCCTCGCTGCACAAATACTCCGCAAGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp TGCAGCGAGGGACTGGGAGGGCCGAGGAGGTTCTCAGATGTTCTTCTCCTTTTGTTCATAAGCAGTCCCTaGAACCTCCCTCCGGTTCCA +
Preference number: 2 (lower is better)
Translates to: CSEGLGGPRRFSDVLLLLFISSP*NLPPVP
Trigger: TGGAACCGGAGGGAGGTTTCAGGGACTGCTTATGAA...CAAAAGGAGAAGAACATCTGAGAACCTCCTCGGCCCTCCCAGTCCCTCGCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678349.1
3UTR-3UTR CCA 90 bp GGCCATAGACCCTGTCAGCTGTCATTCTGGCCTCTCTTGCGGAGTATTTGTGCAAGCCAAAATGGGCCGTaGCCATTGCCTCTCCTCACG +
Preference number: 2 (lower is better)
Translates to: GHRPCQLSFWPLLRSICASQNGP*PLPLLT
Trigger: CGTGAGGAGAGGCAATGGCCACGGCCCATTTTGGCT...TGCACAAATACTCCGCAAGAGAGGCCAGAATGACAGCTGACAGGGTCTATGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CCA 90 bp GTCAGCTGTCATTCTGGCCTCTCTTGCGGAGTATTTGTGCAGCGAGGGACTGGGAATACTGTACAGTTCTaGGGCCAAGAGGCTGGGCAC +
Preference number: 2 (lower is better)
Translates to: VSCHSGLSCGVFVQRGTGNTVQF*GQEAGH
Trigger: GTGCCCAGCCTCTTGGCCCCAGAACTGTACAGTATT...CCCAGTCCCTCGCTGCACAAATACTCCGCAAGAGAGGCCAGAATGACAGCTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR CAA 90 bp GCAAGCAAGTTAAAGACTTTTAGATGGCAGGCGTTATCGGTCAGGTaGGGAGTGAACGCTTTGTCCAGAGGAGGAGGTAGGGACGCCGGG +
Preference number: 2 (lower is better)
Translates to: ASKLKTFRWQALSVR*GVNALSRGGGRDAG
Trigger: CCCGGCGTCCCTACCTCCTCCTCTGGACAAAGCGTTCACTCCCAACCTGACCGATAACGCCTGCCATCTAAAAGTCTTTAACTTGCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589955.2
ENST00000678349.1
3UTR CAA 90 bp CTCAAGCCAGGAAACGGTGGTCCTGGGGACTCCTGGACCTTCAGCTaGAGAAACACTGAAGGGGTACCATTTACCACCACATCCTACTGG +
Preference number: 2 (lower is better)
Translates to: LKPGNGGPGDSWTFS*RNTEGVPFTTTSYW
Trigger: CCAGTAGGATGTGGTGGTAAATGGTACCCCTTCAGTGTTTCTCAAGCTGAAGGTCCAGGAGTCCCCAGGACCACCGTTTCCTGGCTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589955.2
ENST00000678349.1
3UTR-3UTR TCA 90 bp AAGGTTCTTCGCAGAGGCATCACATCGACCCCAATACAGGTCCTTCATACCCTTACCACACTGCCCTGTTaGTCATCCCTGGAGGAGGCC +
Preference number: 2 (lower is better)
Translates to: KVLRRGITSTPIQVLHTLTTLPC*SSLEEA
Trigger: GGCCTCCTCCAGGGATGATCAACAGGGCAGTGTGGT...AAGGGTATGAAGGACCTGTATTGGGGTCGATGTGATGCCTCTGCGAAGAACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp CCACCAGTGTTCCCATCTTCTGTGCTCAGCTTGGTATGCAGAACAACCTTGTTGCTCCCATGCTCCACGTaGAAACGGGCCTACCTGGAG +
Preference number: 2 (lower is better)
Translates to: PPVFPSSVLSLVCRTTLLLPCST*KRAYLE
Trigger: CTCCAGGTAGGCCCGTTTTCACGTGGAGCATGGGAG...CAACAAGGTTGTTCTGCATACCAAGCTGAGCACAGAAGATGGGAACACTGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp GGCCATAGACCCTGTCAGCTGTCATTCTGGCCTCTCTTGCGGAGTATTTGTGCACCACCAGGGCCAAACTaGGCAGAGTCTTCAGAGACA +
Preference number: 2 (lower is better)
Translates to: GHRPCQLSFWPLLRSICAPPGPN*AESSET
Trigger: TGTCTCTGAAGACTCTGCTCAGTTTGGCCCTGGTGG...TGCACAAATACTCCGCAAGAGAGGCCAGAATGACAGCTGACAGGGTCTATGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678134.1
ENST00000678349.1
3UTR-3UTR GCA 90 bp TTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGGTGCTTGGCAATTACAAACAGAGGCCGCATaGTGGGGCCGTACAGTTCCA +
Preference number: 2 (lower is better)
Translates to: FTGTEHPGGATRSGAWQLQTEAA*WGRTVP
Trigger: TGGAACTGTACGGCCCCAGCATGCGGCCTCTGTTTG...TAATTGCCAAGCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp AATGGGCCGTGGCCATTGCCTCTCCTCACGTTCCCAGCCTTCACCATGTCCTTCGCAAAGAAATGCAAGTaGATGAACACCTTCTCCCCA +
Preference number: 2 (lower is better)
Translates to: NGPWPLPLLTFPAFTMSFAKKCK*MNTFSP
Trigger: TGGGGAGAAGGTGTTCATTCACTTGCATTTCTTTGC...GAAGGACATGGTGAAGGCTGGGAACGTGAGGAGAGGCAATGGCCACGGCCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp GCCACACAGCCAACGTGCCATGTGCTACAGCCAAAATGGGCCGTGGCCATTGCCCAGGTATGCATCATGTaGGTCATATGCAAAGAGTCT +
Preference number: 2 (lower is better)
Translates to: ATQPTCHVLQPKWAVAIAQVCIM*VICKES
Trigger: AGACTCTTTGCATATGACTCACATGATGCATACCTG...GGCAATGGCCACGGCCCATTTTGGCTGTAGCACATGGCACGTTGGCTGTGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp TTGCCCAGGGACGAGGAAACCTTCAAGAAACAAGGTCAAAGGGACAACAGATATCCTGAAGGACAGCCATaGGAAAGCCCCCGCGGAAGG +
Preference number: 2 (lower is better)
Translates to: LPRDEETFKKQGQRDNRYPEGQP*ESPRGR
Trigger: CCTTCCGCGGGGGCTTTCTCATGGCTGTCCTTCAGG...ATATCTGTTGTCCCTTTGACCTTGTTTCTTGAAGGTTTCCTCGTCCCTGGGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR GCA 90 bp CTCTCTTGCGGAGTATTTGTGCAGCGAGGGACTGGGAGGGCCGAGGAGGTTCTCCCACGTGGAGCATACTaGAAACTGACTCCATTAAAA +
Preference number: 2 (lower is better)
Translates to: LSCGVFVQRGTGRAEEVLPRGAY*KLTPLK
Trigger: TTTTAATGGAGTCAGTTTGCAGTATGCTCCACGTGG...GAGAACCTCCTCGGCCCTCCCAGTCCCTCGCTGCACAAATACTCCGCAAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CCA 90 bp GGGACTGGGAGGGCCGAGGAGGTTCTCAGATGTTCTTCTCCTTTTGGGGCTTTTGCCAGTATTGGGAGTTaGGGGGTGCGTATCCAAAAT +
Preference number: 2 (lower is better)
Translates to: GTGRAEEVLRCSSPFGAFASIGS*GVRIQN
Trigger: ATTTTGGATACGCACCCCCCAACTCCCAATACTGGC...AAAAGCCCCAAAAGGAGAAGAACATCTGAGAACCTCCTCGGCCCTCCCAGTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CCA 90 bp CATCCGTCTGCTCTTCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTAGGCGGCCTGATGCTCTaGGTAACTCTAGCCTTCCTG +
Preference number: 2 (lower is better)
Translates to: HPSALQMVIRPTTWKANLGGLML*VTLAFL
Trigger: CAGGAAGGCTAGAGTTACCCAGAGCATCAGGCCGCC...TAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGAAGAGCAGACGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CCA 90 bp GTCAGCTGTCATTCTGGCCTCTCTTGCGGAGTATTTGTGCAGCGAGGGACTGGGGAGGATCTTACCACGTaGAGCATACTGCAAACTGAC +
Preference number: 2 (lower is better)
Translates to: VSCHSGLSCGVFVQRGTGEDLTT*SILQTD
Trigger: GTCAGTTTGCAGTATGCTCCACGTGGTAAGATCCTC...CCCAGTCCCTCGCTGCACAAATACTCCGCAAGAGAGGCCAGAATGACAGCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CCA 90 bp CACAGTTCCCAGTTTAGAGGGTCACTCTCCATCACCTGCCCAAAACTCAATCCCGGTCCTGGGGACTCCTaGACCTTCAGCTTGAGAAAC +
Preference number: 2 (lower is better)
Translates to: HSSQFRGSLSITCPKLNPGPGDS*TFSLRN
Trigger: GTTTCTCAAGCTGAAGGTCCAGGAGTCCCCAGGACC...GGGATTGAGTTTTGGGCAGGTGATGGAGAGTGACCCTCTAAACTGGGAACTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR-3UTR TCA 90 bp CCCGCCGGGGAGGTCTGGCTTCATACCACAGGTTTCCTGCTTTCTTGGTGGAGCATTCGACGTTTTGCCTaGAGACTGTTAATTGTTGTG +
Preference number: 2 (lower is better)
Translates to: PAGEVWLHTTGFLLSWWSIRRFA*RLLIVV
Trigger: CACAACAATTAACAGTCTTCAGGCAAAACGTCGAAT...GCTCCACCAAGAAAGCAGGAAACCTGTGGTATGAAGCCAGACCTCCCCGGCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp TTGCCCAGGGACGAGGAAACCTTCAAGAAACAAGGTCAAAGGGACAACAGATATACCACACTGCCCTGTTaGTCATCCCTGGAGGAGGCC +
Preference number: 2 (lower is better)
Translates to: LPRDEETFKKQGQRDNRYTTLPC*SSLEEA
Trigger: GGCCTCCTCCAGGGATGATCAACAGGGCAGTGTGGT...ATATCTGTTGTCCCTTTGACCTTGTTTCTTGAAGGTTTCCTCGTCCCTGGGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR GCA 90 bp GCCACACAGCCAACGTGCCATGTGCTACAGCCAAAATGGGCCGTGGCCATTGCCGCTGATTCGACGTTTTaGCTGAAGACTGTTAATTGT +
Preference number: 2 (lower is better)
Translates to: ATQPTCHVLQPKWAVAIAADSTF*LKTVNC
Trigger: ACAATTAACAGTCTTCAGGCAAAACGTCGAATCAGC...GGCAATGGCCACGGCCCATTTTGGCTGTAGCACATGGCACGTTGGCTGTGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR GCA 90 bp CCACCAGTGTTCCCATCTTCTGTGCTCAGCTTGGTATGCAGAACAACCTTGTTGAGCCACACGAAGCGGTaGTTGGCAATTAGTGGTCGG +
Preference number: 2 (lower is better)
Translates to: PPVFPSSVLSLVCRTTLLSHTKR*LAISGR
Trigger: CCGACCACTAATTGCCAAGCACCGCTTCGTGTGGCT...CAACAAGGTTGTTCTGCATACCAAGCTGAGCACAGAAGATGGGAACACTGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR GCA 90 bp CCGTCTGCTCTTCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTAGCCACACGAAGCGGTaGTTGGCAATTAGTGGTCGG +
Preference number: 2 (lower is better)
Translates to: PSALQMVIRPTTWKANLCSHTKR*LAISGR
Trigger: CCGACCACTAATTGCCAAGCACCGCTTCGTGTGGCT...ACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGAAGAGCAGACGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR GCA 90 bp AAGGTTCTTCGCAGAGGCATCACATCGACCCCAATACAGGTCCTTCATACCCTTAGCCACACGAAGCGGTaGTTGGCAATTAGTGGTCGG +
Preference number: 2 (lower is better)
Translates to: KVLRRGITSTPIQVLHTLSHTKR*LAISGR
Trigger: CCGACCACTAATTGCCAAGCACCGCTTCGTGTGGCT...AAGGGTATGAAGGACCTGTATTGGGGTCGATGTGATGCCTCTGCGAAGAACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR GCA 90 bp GTCTGGCTTCATACCACAGGTTTCCTGCTTTCTTGGTGGAGCGTAAGCACCACTGCCACACAGCCAACGTaGCATGTGCTACAGCCAAAA +
Preference number: 2 (lower is better)
Translates to: VWLHTTGFLLSWWSVSTTATQPT*HVLQPK
Trigger: TTTTGGCTGTAGCACATGGCACGTTGGCTGTGTGGC...AGTGGTGCTTACGCTCCACCAAGAAAGCAGGAAACCTGTGGTATGAAGCCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR GCA 90 bp TCTTCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCCACACGGGAAACCAGTaGGCCTGTCCACGGCACAGA +
Preference number: 2 (lower is better)
Translates to: SSDGDPANNMESESMFTGHTGNQ*ACPRHR
Trigger: TCTGTGCCGTGGACAGGCGCACTGGTTTCCCGTGTG...GCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678134.1
3UTR-3UTR CCA 90 bp GCCACACAGCCAACGTGCCATGTGCTACAGCCAAAATGGGCCGTGGCCATTGCCATCCGGCCAACAACATaGAAAGCGAATCTATGTTTA +
Preference number: 2 (lower is better)
Translates to: ATQPTCHVLQPKWAVAIAIRPTT*KANLCL
Trigger: TAAACATAGATTCGCTTTCCATGTTGTTGGCCGGAT...GGCAATGGCCACGGCCCATTTTGGCTGTAGCACATGGCACGTTGGCTGTGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CCA 90 bp AACTCAATCCCTTGCCTGCAAGAGTCCCTTTGTCTTAAAGAAGCTGCAAGGTCACAAGCCAGGAAACGGTaGTCCTGGGGACTCCTGGAC +
Preference number: 2 (lower is better)
Translates to: NSIPCLQESLCLKEAARSQARKR*SWGLLD
Trigger: GTCCAGGAGTCCCCAGGACCACCGTTTCCTGGCTTG...TGACCTTGCAGCTTCTTTAAGACAAAGGGACTCTTGCAGGCAAGGGATTGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR-3UTR CCA 90 bp GTCAGCTGTCATTCTGGCCTCTCTTGCGGAGTATTTGTGCAGCGAGGGACTGGGTGTCAAGACCCAACCTaGTATCTGGTTCATAAGCAG +
Preference number: 2 (lower is better)
Translates to: VSCHSGLSCGVFVQRGTGCQDPT*YLVHKQ
Trigger: CTGCTTATGAACCAGATACCAGGTTGGGTCTTGACA...CCCAGTCCCTCGCTGCACAAATACTCCGCAAGAGAGGCCAGAATGACAGCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678349.1
3UTR CAA 90 bp GTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGGTGCTaGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGATGGG +
Preference number: 2 (lower is better)
Translates to: VYRHRTSRWSHTKRC*AISGRISKDRSFDG
Trigger: CCCATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp TGCAGCGAGGGACTGGGAGGGCCGAGGAGGTTCTCAGATGTTCTTCTCCTTTTGCAGGTATGCATCATGTaGGTCATATGCAAAGAGTCT +
Preference number: 2 (lower is better)
Translates to: CSEGLGGPRRFSDVLLLLQVCIM*VICKES
Trigger: AGACTCTTTGCATATGACTCACATGATGCATACCTG...CAAAAGGAGAAGAACATCTGAGAACCTCCTCGGCCCTCCCAGTCCCTCGCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp AGCTTGGAGGATCTTACCACGTGGAGCATACTGCAAACTGACTCCATTAAAATGCTCCCATGCTCCACGTaGAAACGGGCCTACCTGGAG +
Preference number: 2 (lower is better)
Translates to: SLEDLTTWSILQTDSIKMLPCST*KRAYLE
Trigger: CTCCAGGTAGGCCCGTTTTCACGTGGAGCATGGGAG...CATTTTAATGGAGTCAGTTTGCAGTATGCTCCACGTGGTAAGATCCTCCAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR GCA 90 bp ATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCCACACGAAGCGGTaGTTGGCAATTAGTGGTCGG +
Preference number: 2 (lower is better)
Translates to: MESESMFTGTEHPGGATRSHTKR*LAISGR
Trigger: CCGACCACTAATTGCCAAGCACCGCTTCGTGTGGCT...TCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR GCA 90 bp AAGGTTCTTCGCAGAGGCATCACATCGACCCCAATACAGGTCCTTCATACCCTTGCCACACAGCCAACGTaGCATGTGCTACAGCCAAAA +
Preference number: 2 (lower is better)
Translates to: KVLRRGITSTPIQVLHTLATQPT*HVLQPK
Trigger: TTTTGGCTGTAGCACATGGCACGTTGGCTGTGTGGC...AAGGGTATGAAGGACCTGTATTGGGGTCGATGTGATGCCTCTGCGAAGAACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR GCA 90 bp ATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACCAAACAGAGGCCGCATaGTGGGGCCGTACAGTTCCA +
Preference number: 2 (lower is better)
Translates to: MVIRPTTWKANLCLQAQNQTEAA*WGRTVP
Trigger: TGGAACTGTACGGCCCCAGCATGCGGCCTCTGTTTG...GTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
3UTR-3UTR CCA 90 bp CAAGTTCCAGAGGATTCTGTTTCTTACTCAGACAGAGCCAGTATTGGGAGTTGGCACAGAACATCCAGGTaGAGCCACACGAAGCGGTGC +
Preference number: 2 (lower is better)
Translates to: QVPEDSVSYSDRASIGSWHRTSR*SHTKRC
Trigger: GCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTG...CCAACTCCCAATACTGGCTCTGTCTGAGTAAGAAACAGAATCCTCTGGAACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CCA 90 bp GTTTCTCATTTGTCACACAAGGTTCTTCGCAGAGGCATCACATCGACCCCAATACAGGAGGGCTCTGGGTaGGTCTGTGTTGAAACAGGC +
Preference number: 2 (lower is better)
Translates to: VSHLSHKVLRRGITSTPIQEGSG*VCVETG
Trigger: GCCTGTTTCAACACAGACCCACCCAGAGCCCTCCTG...TATTGGGGTCGATGTGATGCCTCTGCGAAGAACCTTGTGTGACAAATGAGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CCA 90 bp GGCCATAGACCCTGTCAGCTGTCATTCTGGCCTCTCTTGCGGAGTATTTGTGCACTGGGGCCAAGAGGCTaGGCACATTTACTGTTATTA +
Preference number: 2 (lower is better)
Translates to: GHRPCQLSFWPLLRSICALGPRG*AHLLLL
Trigger: TAATAACAGTAAATGTGCCCAGCCTCTTGGCCCCAG...TGCACAAATACTCCGCAAGAGAGGCCAGAATGACAGCTGACAGGGTCTATGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CCA 90 bp GATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAACAGAGGCCGCATGCTaGGGCCGTACAGTTCCACAA +
Preference number: 2 (lower is better)
Translates to: DPANNMESESMFTGTEHPTEAAC*GRTVPQ
Trigger: TTGTGGAACTGTACGGCCCCAGCATGCGGCCTCTGT...TGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp CCCAGGGCCTCTGTTCCTTCCCTCTACAGTGATACATGTCTTAAGAAGGGTCGTAGAAATGCAAGTGAATaGACACCTTCTCCCCAGCCT +
Preference number: 2 (lower is better)
Translates to: PRASVPSLYSDTCLKKGRRNASE*TPSPQP
Trigger: AGGCTGGGGAGAAGGTGTTCATTCACTTGCATTTCT...ACGACCCTTCTTAAGACATGTATCACTGTAGAGGGAAGGAACAGAGGCCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp GTCTGGCTTCATACCACAGGTTTCCTGCTTTCTTGGTGGAGCGTAAGCACCACTAGAAATGCAAGTGAATaGACACCTTCTCCCCAGCCT +
Preference number: 2 (lower is better)
Translates to: VWLHTTGFLLSWWSVSTTRNASE*TPSPQP
Trigger: AGGCTGGGGAGAAGGTGTTCATTCACTTGCATTTCT...AGTGGTGCTTACGCTCCACCAAGAAAGCAGGAAACCTGTGGTATGAAGCCAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp GGGACTGGGAGGGCCGAGGAGGTTCTCAGATGTTCTTCTCCTTTTGGGGCTTTTTGTTGGCGTCTTGTTTaGACTAAATTGAGGTGCTTC +
Preference number: 2 (lower is better)
Translates to: GTGRAEEVLRCSSPFGAFCWRLV*TKLRCF
Trigger: GAAGCACCTCAATTTAGTTCAAACAAGACGCCAACA...AAAAGCCCCAAAAGGAGAAGAACATCTGAGAACCTCCTCGGCCCTCCCAGTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp AGCTTGGAGGATCTTACCACGTGGAGCATACTGCAAACTGACTCCATTAAAATGCGGTCAGGTTGGGAGTaGACGCTTTGTCCAGAGGAG +
Preference number: 2 (lower is better)
Translates to: SLEDLTTWSILQTDSIKMRSGWE*TLCPEE
Trigger: CTCCTCTGGACAAAGCGTTCACTCCCAACCTGACCG...CATTTTAATGGAGTCAGTTTGCAGTATGCTCCACGTGGTAAGATCCTCCAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678349.1
3UTR-3UTR GCA 90 bp AAAGGTCTGATCATTCTGTTCCCTGAGGCCCGCCGGGGAGGTCTGGCTTCATACGCTGATTCGACGTTTTaGCTGAAGACTGTTAATTGT +
Preference number: 2 (lower is better)
Translates to: KGLIILFPEARRGGLASYADSTF*LKTVNC
Trigger: ACAATTAACAGTCTTCAGGCAAAACGTCGAATCAGC...GTATGAAGCCAGACCTCCCCGGCGGGCCTCAGGGAACAGAATGATCAGACCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR GCA 90 bp TCTTCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCAGCCACACGAAGCGGTaGTTGGCAATTAGTGGTCGG +
Preference number: 2 (lower is better)
Translates to: SSDGDPANNMESESMFTGSHTKR*LAISGR
Trigger: CCGACCACTAATTGCCAAGCACCGCTTCGTGTGGCT...GCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR GCA 90 bp TCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAAGCCACACGAAGCGGTaGTTGGCAATTAGTGGTCGG +
Preference number: 2 (lower is better)
Translates to: SDGDPANNMESESMFTGTSHTKR*LAISGR
Trigger: CCGACCACTAATTGCCAAGCACCGCTTCGTGTGGCT...TGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR GCA 90 bp CAAGTTCCAGAGGATTCTGTTTCTTACTCAGACAGAGCCAGTATTGGGAGTTGGAGCCAACGTGCCATGTaGTACAGCCAAAATGGGCCG +
Preference number: 2 (lower is better)
Translates to: QVPEDSVSYSDRASIGSWSQRAM*YSQNGP
Trigger: CGGCCCATTTTGGCTGTAGCACATGGCACGTTGGCT...CCAACTCCCAATACTGGCTCTGTCTGAGTAAGAAACAGAATCCTCTGGAACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR GCA 90 bp CTGCCAAATCTTCGGAGACGACCCGATGGCCATAGACCCTGTCAGCTGTCATTCCCACGTGGAGCATACTaGAAACTGACTCCATTAAAA +
Preference number: 2 (lower is better)
Translates to: LPNLRRRPDGHRPCQLSFPRGAY*KLTPLK
Trigger: TTTTAATGGAGTCAGTTTGCAGTATGCTCCACGTGG...GAATGACAGCTGACAGGGTCTATGGCCATCGGGTCGTCTCCGAAGATTTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR GCA 90 bp TTGCCCAGGGACGAGGAAACCTTCAAGAAACAAGGTCAAAGGGACAACAGATATCCGGTTCCAACAAGCTaGTCAAGCCAGGAAACGGTG +
Preference number: 2 (lower is better)
Translates to: LPRDEETFKKQGQRDNRYPVPTS*SSQETV
Trigger: CACCGTTTCCTGGCTTGAGCAGCTTGTTGGAACCGG...ATATCTGTTGTCCCTTTGACCTTGTTTCTTGAAGGTTTCCTCGTCCCTGGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678349.1
3UTR-3UTR CCA 90 bp GTCACCGAAATGTTCACTTCCTCAAGTTCCAGAGGATTCTGTTTCTTACTCAGACCTGTTGATCATCCCTaGAGGAGGCCAGTGAGGGCC +
Preference number: 2 (lower is better)
Translates to: VTEMFTSSSSRGFCFLLRPVDHP*RRPVRA
Trigger: GGCCCTCACTGGCCTCCTCCAGGGATGATCAACAGG...TCTGAGTAAGAAACAGAATCCTCTGGAACTTGAGGAAGTGAACATTTCGGTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CCA 90 bp GGCCATAGACCCTGTCAGCTGTCATTCTGGCCTCTCTTGCGGAGTATTTGTGCAACTTCTAAAGCAGCTTaGAGGATCTTACCACGTGGA +
Preference number: 2 (lower is better)
Translates to: GHRPCQLSFWPLLRSICATSKAA*RILPRG
Trigger: TCCACGTGGTAAGATCCTCCAAGCTGCTTTAGAAGT...TGCACAAATACTCCGCAAGAGAGGCCAGAATGACAGCTGACAGGGTCTATGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CCA 90 bp GTGAGATGCATATTTCATGATTGTCCAAGGTCATGGTTGTCCAAAGACATGGAATGTGCAGCGAGGGACTaGGAGGGCCGAGGAGGTTCT +
Preference number: 2 (lower is better)
Translates to: VRCIFHDCPRSWLSKDMECAARD*EGRGGS
Trigger: AGAACCTCCTCGGCCCTCCCAGTCCCTCGCTGCACA...TTCCATGTCTTTGGACAACCATGACCTTGGACAATCATGAAATATGCATCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CCA 90 bp TTCATTGTTACTTCTAAAGCAGCTTGGAGGATCTTACCACGTGGAGCATACTGCACAGAGGCCGCATGCTaGGGCCGTACAGTTCCACAA +
Preference number: 2 (lower is better)
Translates to: FIVTSKAAWRILPRGAYCTEAAC*GRTVPQ
Trigger: TTGTGGAACTGTACGGCCCCAGCATGCGGCCTCTGT...GCAGTATGCTCCACGTGGTAAGATCCTCCAAGCTGCTTTAGAAGTAACAATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678134.1
ENST00000678349.1
3UTR CAA 90 bp TACTGCTTTAGTGAACCTTTTGCATATTTGTTTGGGGCAGGCATGTaGACTTCACTTGTGGCCCAGATAGGCACCCAGGGTGATGCAAGC +
Preference number: 2 (lower is better)
Translates to: YCFSEPFAYLFGAGM*TSLVAQIGTQGDAS
Trigger: GCTTGCATCACCCTGGGTGCCTATCTGGGCCACAAGTGAAGTCAACATGCCTGCCCCAAACAAATATGCAAAAGGTTCACTAAAGCAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp CCCAGGGCCTCTGTTCCTTCCCTCTACAGTGATACATGTCTTAAGAAGGGTCGTGCAAAGAAATGCAAGTaGATGAACACCTTCTCCCCA +
Preference number: 2 (lower is better)
Translates to: PRASVPSLYSDTCLKKGRAKKCK*MNTFSP
Trigger: TGGGGAGAAGGTGTTCATTCACTTGCATTTCTTTGC...ACGACCCTTCTTAAGACATGTATCACTGTAGAGGGAAGGAACAGAGGCCCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp GTGAGATGCATATTTCATGATTGTCCAAGGTCATGGTTGTCCAAAGACATGGAACTCCCATGCTCCACGTaGAAACGGGCCTACCTGGAG +
Preference number: 2 (lower is better)
Translates to: VRCIFHDCPRSWLSKDMELPCST*KRAYLE
Trigger: CTCCAGGTAGGCCCGTTTTCACGTGGAGCATGGGAG...TTCCATGTCTTTGGACAACCATGACCTTGGACAATCATGAAATATGCATCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp CACAATGCCTTATTCAGACCTAGGAATAAATCCACACTCCACTCTACAGCCAATCGGTCAGGTTGGGAGTaGACGCTTTGTCCAGAGGAG +
Preference number: 2 (lower is better)
Translates to: HNALFRPRNKSTLHSTANRSGWE*TLCPEE
Trigger: CTCCTCTGGACAAAGCGTTCACTCCCAACCTGACCG...ATTGGCTGTAGAGTGGAGTGTGGATTTATTCCTAGGTCTGAATAAGGCATTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR-3UTR TCA 90 bp AACTCAATCCCTTGCCTGCAAGAGTCCCTTTGTCTTAAAGAAGCTGCAAGGTCAAGCAAAGCCATAGCCTaGTACTCCTCAGGACACCTC +
Preference number: 2 (lower is better)
Translates to: NSIPCLQESLCLKEAARSSKAIA*YSSGHL
Trigger: GAGGTGTCCTGAGGAGTATCAGGCTATGGCTTTGCT...TGACCTTGCAGCTTCTTTAAGACAAAGGGACTCTTGCAGGCAAGGGATTGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR-3UTR CCA 90 bp GATTTAAGGGCATTTTTCCCATCGCTGTCCTTCGGCGTGGAAATCTCAGTGGGTGCGTGGAAATCTCAGTaGGTACTAGGTCCATCTGAA +
Preference number: 2 (lower is better)
Translates to: DLRAFFPSLSFGVEISVGAWKSQ*VLGPSE
Trigger: TTCAGATGGACCTAGTACCCACTGAGATTTCCACGC...ACCCACTGAGATTTCCACGCCGAAGGACAGCGATGGGAAAAATGCCCTTAAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CCA 90 bp CCACCAGTGTTCCCATCTTCTGTGCTCAGCTTGGTATGCAGAACAACCTTGTTGAACAAAGCTCCTCAGTaGCCAGTGACATCCAGGTTT +
Preference number: 2 (lower is better)
Translates to: PPVFPSSVLSLVCRTTLLNKAPQ*PVTSRF
Trigger: AAACCTGGATGTCACTGGCCACTGAGGAGCTTTGTT...CAACAAGGTTGTTCTGCATACCAAGCTGAGCACAGAAGATGGGAACACTGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CCA 90 bp AAGGTTCTTCGCAGAGGCATCACATCGACCCCAATACAGGTCCTTCATACCCTTGAGGATCTTACCACGTaGAGCATACTGCAAACTGAC +
Preference number: 2 (lower is better)
Translates to: KVLRRGITSTPIQVLHTLEDLTT*SILQTD
Trigger: GTCAGTTTGCAGTATGCTCCACGTGGTAAGATCCTC...AAGGGTATGAAGGACCTGTATTGGGGTCGATGTGATGCCTCTGCGAAGAACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CCA 90 bp AGATGCATATTTCATGATTGTCCAAGGTCATGGTTGTCCAAAGACATGGAACAGCAAGCCAGGAAACGGTaGTCCTGGGGACTCCTGGAC +
Preference number: 2 (lower is better)
Translates to: RCIFHDCPRSWLSKDMEQQARKR*SWGLLD
Trigger: GTCCAGGAGTCCCCAGGACCACCGTTTCCTGGCTTG...CTGTTCCATGTCTTTGGACAACCATGACCTTGGACAATCATGAAATATGCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678349.1
3UTR-3UTR TCA 90 bp TTCCTGATGCGGAAGTCACCGAAATGTTCACTTCCTCAAGTTCCAGAGGATTCTGGGAAGCAACAACTCTaGTTTTATTTCGCCGGCTCC +
Preference number: 2 (lower is better)
Translates to: FLMRKSPKCSLPQVPEDSGKQQL*FYFAGS
Trigger: GGAGCCGGCGAAATAAAATCAGAGTTGTTGCTTCCC...AGAATCCTCTGGAACTTGAGGAAGTGAACATTTCGGTGACTTCCGCATCAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678349.1
3UTR-3UTR TCA 90 bp GTCTTCTGGGACAATCTATCAGAGGCTGATCATTCCAAGGACCTGATTTATCCACCTGGACCTTCAGCTTaGGAAACACTGAAGGGGTAC +
Preference number: 2 (lower is better)
Translates to: VFWDNLSEADHSKDLIYPPGPSA*ETLKGY
Trigger: GTACCCCTTCAGTGTTTCTCAAGCTGAAGGTCCAGG...TGGATAAATCAGGTCCTTGGAATGATCAGCCTCTGATAGATTGTCCCAGAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR-3UTR GCA 90 bp GTGATACATGTCTTAAGAAGGGTCGTGGCTCCCATGCTCCACGTGAAAACGGGCGCTGATTCGACGTTTTaGCTGAAGACTGTTAATTGT +
Preference number: 2 (lower is better)
Translates to: VIHVLRRVVAPMLHVKTGADSTF*LKTVNC
Trigger: ACAATTAACAGTCTTCAGGCAAAACGTCGAATCAGC...GCCCGTTTTCACGTGGAGCATGGGAGCCACGACCCTTCTTAAGACATGTATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR GCA 90 bp AGCTTGGAGGATCTTACCACGTGGAGCATACTGCAAACTGACTCCATTAAAATGGCCACACAGCCAACGTaGCATGTGCTACAGCCAAAA +
Preference number: 2 (lower is better)
Translates to: SLEDLTTWSILQTDSIKMATQPT*HVLQPK
Trigger: TTTTGGCTGTAGCACATGGCACGTTGGCTGTGTGGC...CATTTTAATGGAGTCAGTTTGCAGTATGCTCCACGTGGTAAGATCCTCCAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR GCA 90 bp GGGCCCACGGCAGATTTTCCAAAAGGTTTAGGTGCATGGATTTACTCAGTATCTAGAGTTTTCTGCCCCTaGCAAATCTTCGGAGACGAC +
Preference number: 2 (lower is better)
Translates to: GPTADFPKGLGAWIYSVSRVFCP*QIFGDD
Trigger: GTCGTCTCCGAAGATTTGGCAGGGGCAGAAAACTCT...AGATACTGAGTAAATCCATGCACCTAAACCTTTTGGAAAATCTGCCGTGGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR GCA 90 bp GTGAGATGCATATTTCATGATTGTCCAAGGTCATGGTTGTCCAAAGACATGGAACAAACAGAGGCCGCATaGTGGGGCCGTACAGTTCCA +
Preference number: 2 (lower is better)
Translates to: VRCIFHDCPRSWLSKDMEQTEAA*WGRTVP
Trigger: TGGAACTGTACGGCCCCAGCATGCGGCCTCTGTTTG...TTCCATGTCTTTGGACAACCATGACCTTGGACAATCATGAAATATGCATCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678134.1
ENST00000678349.1
3UTR-3UTR CCA 90 bp TGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAACACGAAGCGGTGCTTaGCAATTAGTGGTCGGATTT +
Preference number: 2 (lower is better)
Translates to: WKANLCLQAQNIQVEPHETRSGA*QLVVGF
Trigger: AAATCCGACCACTAATTGCCAAGCACCGCTTCGTGT...TTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CCA 90 bp GTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCGCCAGTATTGGGAGTTaGGGGGTGCGTATCCAAAAT +
Preference number: 2 (lower is better)
Translates to: VIRPTTWKANLCLQAQNIASIGS*GVRIQN
Trigger: ATTTTGGATACGCACCCCCCAACTCCCAATACTGGC...GATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CCA 90 bp AACTCAATCCCTTGCCTGCAAGAGTCCCTTTGTCTTAAAGAAGCTGCAAGGTCATCAGGGGAGCTTGTTTaGGATGCAGACTGTCAAGAC +
Preference number: 2 (lower is better)
Translates to: NSIPCLQESLCLKEAARSSGELV*DADCQD
Trigger: GTCTTGACAGTCTGCATCCCAAACAAGCTCCCCTGA...TGACCTTGCAGCTTCTTTAAGACAAAGGGACTCTTGCAGGCAAGGGATTGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR-3UTR TCA 90 bp CTCTGGGTAACTCTAGCCTTCCTGATGCGGAAGTCACCGAAATGTTCACTTCCTTTGGCAGTAAATAGCTaGTTCGACGTTTTGCCTGAA +
Preference number: 2 (lower is better)
Translates to: LWVTLAFLMRKSPKCSLPLAVNS*FDVLPE
Trigger: TTCAGGCAAAACGTCGAATCAGCTATTTACTGCCAA...AGGAAGTGAACATTTCGGTGACTTCCGCATCAGGAAGGCTAGAGTTACCCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp TGGGTACTAGGTCCATCTGAAGTTCCCAACTCTTTTCCTCCCACCAGGTATGCATTGGCAGTAAATAGCTaGTTCGACGTTTTGCCTGAA +
Preference number: 2 (lower is better)
Translates to: WVLGPSEVPNSFPPTRYALAVNS*FDVLPE
Trigger: TTCAGGCAAAACGTCGAATCAGCTATTTACTGCCAA...TGCATACCTGGTGGGAGGAAAAGAGTTGGGAACTTCAGATGGACCTAGTACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp CCAACTCTTTTCCTCCCACCAGGTATGCATCATGTGAGTCATATGCAAAGAGTCAGAAATGCAAGTGAATaGACACCTTCTCCCCAGCCT +
Preference number: 2 (lower is better)
Translates to: PTLFLPPGMHHVSHMQRVRNASE*TPSPQP
Trigger: AGGCTGGGGAGAAGGTGTTCATTCACTTGCATTTCT...GACTCTTTGCATATGACTCACATGATGCATACCTGGTGGGAGGAAAAGAGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp CCAACTCTTTTCCTCCCACCAGGTATGCATCATGTGAGTCATATGCAAAGAGTCGGTACTAGGTCCATCTaGAGTTCCCAACTCTTTTCC +
Preference number: 2 (lower is better)
Translates to: PTLFLPPGMHHVSHMQRVGTRSI*SSQLFS
Trigger: GGAAAAGAGTTGGGAACTTCAGATGGACCTAGTACC...GACTCTTTGCATATGACTCACATGATGCATACCTGGTGGGAGGAAAAGAGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp GTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCGGTACTAGGTCCATCTaGAGTTCCCAACTCTTTTCC +
Preference number: 2 (lower is better)
Translates to: VIRPTTWKANLCLQAQNIGTRSI*SSQLFS
Trigger: GGAAAAGAGTTGGGAACTTCAGATGGACCTAGTACC...GATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp CCCAGGGACGAGGAAACCTTCAAGAAACAAGGTCAAAGGGACAACAGATATAACTTGACAGTGGAATTCTaGGCTCCATCAGCTTCCAGA +
Preference number: 2 (lower is better)
Translates to: PRDEETFKKQGQRDNRYNLTVEF*APSASR
Trigger: TCTGGAAGCTGATGGAGCTCAGAATTCCACTGTCAA...GTTATATCTGTTGTCCCTTTGACCTTGTTTCTTGAAGGTTTCCTCGTCCCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp TTTCCAAAAGGTTTAGGTGCATGGATTTACTCAGTATCTACACTACAGTCTTATCCTGAAGGACAGCCATaGGAAAGCCCCCGCGGAAGG +
Preference number: 2 (lower is better)
Translates to: FPKGLGAWIYSVSTLQSYPEGQP*ESPRGR
Trigger: CCTTCCGCGGGGGCTTTCTCATGGCTGTCCTTCAGG...ATAAGACTGTAGTGTAGATACTGAGTAAATCCATGCACCTAAACCTTTTGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp CCCACGGCAGATTTTCCAAAAGGTTTAGGTGCATGGATTTACTCAGTATCTACAAACGGAGCTGCACTTTaGGCCATGCTGATGTCTCTG +
Preference number: 2 (lower is better)
Translates to: PTADFPKGLGAWIYSVSTNGAAL*AMLMSL
Trigger: CAGAGACATCAGCATGGCTCAAAGTGCAGCTCCGTT...TGTAGATACTGAGTAAATCCATGCACCTAAACCTTTTGGAAAATCTGCCGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp CCACCAGTGTTCCCATCTTCTGTGCTCAGCTTGGTATGCAGAACAACCTTGTTGCATTCATGCTCCATCTaGTTTTCTTTGCATCCAGTG +
Preference number: 2 (lower is better)
Translates to: PPVFPSSVLSLVCRTTLLHSCSI*FSLHPV
Trigger: CACTGGATGCAAAGAAAATCAGATGGAGCATGAATG...CAACAAGGTTGTTCTGCATACCAAGCTGAGCACAGAAGATGGGAACACTGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp GAAGGGGTACCATTTACCACCACATCCTACTGGATTACAAACGCTAGATCTTTGGGGAAGCAACAACTCTaGTTTTATTTCGCCGGCTCC +
Preference number: 2 (lower is better)
Translates to: EGVPFTTTSYWITNARSLGKQQL*FYFAGS
Trigger: GGAGCCGGCGAAATAAAATCAGAGTTGTTGCTTCCC...CAAAGATCTAGCGTTTGTAATCCAGTAGGATGTGGTGGTAAATGGTACCCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000589955.2
ENST00000678349.1
3UTR-3UTR TCA 90 bp GGAACATGGCACACACTGGAGATTCCAGTCCAAGGACTTTGGAATGTCAACTTACAGCTTGAGAAACACTaGAGGGGTACCATTTACCAC +
Preference number: 2 (lower is better)
Translates to: GTWHTLEIPVQGLWNVNLQLEKH*RGTIYH
Trigger: GTGGTAAATGGTACCCCTTCAGTGTTTCTCAAGCTG...TAAGTTGACATTCCAAAGTCCTTGGACTGGAATCTCCAGTGTGTGCCATGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR-3UTR GCA 90 bp GTTTCTCATTTGTCACACAAGGTTCTTCGCAGAGGCATCACATCGACCCCAATACTTTTTCCATCCGTCTaGTCTTCAGATGGTGATCCG +
Preference number: 2 (lower is better)
Translates to: VSHLSHKVLRRGITSTPILFPSV*SSDGDP
Trigger: CGGATCACCATCTGAAGAGCAGACGGATGGAAAAAG...TATTGGGGTCGATGTGATGCCTCTGCGAAGAACCTTGTGTGACAAATGAGAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR GCA 90 bp TCCATGACACCTCACTTCAATGCTTCTTTTAGGATTTGTGACCCTCTCCAAAGTGCCACACAGCCAACGTaGCATGTGCTACAGCCAAAA +
Preference number: 2 (lower is better)
Translates to: SMTPHFNASFRICDPLQSATQPT*HVLQPK
Trigger: TTTTGGCTGTAGCACATGGCACGTTGGCTGTGTGGC...ACTTTGGAGAGGGTCACAAATCCTAAAAGAAGCATTGAAGTGAGGTGTCATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR GCA 90 bp CCCACGGCAGATTTTCCAAAAGGTTTAGGTGCATGGATTTACTCAGTATCTACACCTGCCAGAGTTTTCTaGCCCTGCCAAATCTTCGGA +
Preference number: 2 (lower is better)
Translates to: PTADFPKGLGAWIYSVSTPARVF*PCQIFG
Trigger: TCCGAAGATTTGGCAGGGGCAGAAAACTCTGGCAGG...TGTAGATACTGAGTAAATCCATGCACCTAAACCTTTTGGAAAATCTGCCGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR GCA 90 bp CCACCAGTGTTCCCATCTTCTGTGCTCAGCTTGGTATGCAGAACAACCTTGTTGCTTCCCCAAAAGAAATaGAATCCACTGTCACTCTTG +
Preference number: 2 (lower is better)
Translates to: PPVFPSSVLSLVCRTTLLLPQKK*NPLSLL
Trigger: CAAGAGTGACAGTGGATTGCATTTCTTTTGGGGAAG...CAACAAGGTTGTTCTGCATACCAAGCTGAGCACAGAAGATGGGAACACTGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CCA 90 bp TCTTCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACACGAAGCGGTGCTTaGCAATTAGTGGTCGGATTT +
Preference number: 2 (lower is better)
Translates to: SSDGDPANNMESESMFTGTRSGA*QLVVGF
Trigger: AAATCCGACCACTAATTGCCAAGCACCGCTTCGTGT...GCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CCA 90 bp GTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCGCGTGGAAATCTCAGTaGGTACTAGGTCCATCTGAA +
Preference number: 2 (lower is better)
Translates to: VIRPTTWKANLCLQAQNIAWKSQ*VLGPSE
Trigger: TTCAGATGGACCTAGTACCCACTGAGATTTCCACGC...GATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CCA 90 bp CTGATGCGGAAGTCACCGAAATGTTCACTTCCTCAAGTTCCAGAGGATTCTGTTGCGTGGAAATCTCAGTaGGTACTAGGTCCATCTGAA +
Preference number: 2 (lower is better)
Translates to: LMRKSPKCSLPQVPEDSVAWKSQ*VLGPSE
Trigger: TTCAGATGGACCTAGTACCCACTGAGATTTCCACGC...AACAGAATCCTCTGGAACTTGAGGAAGTGAACATTTCGGTGACTTCCGCATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CCA 90 bp TTCCTGATGCGGAAGTCACCGAAATGTTCACTTCCTCAAGTTCCAGAGGATTCTGCGTGGAAATCTCAGTaGGTACTAGGTCCATCTGAA +
Preference number: 2 (lower is better)
Translates to: FLMRKSPKCSLPQVPEDSAWKSQ*VLGPSE
Trigger: TTCAGATGGACCTAGTACCCACTGAGATTTCCACGC...AGAATCCTCTGGAACTTGAGGAAGTGAACATTTCGGTGACTTCCGCATCAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CCA 90 bp GTCTTCTGGGACAATCTATCAGAGGCTGATCATTCCAAGGACCTGATTTATCCAGAACATGGCACACACTaGAGATTCCAGTCCAAGGAC +
Preference number: 2 (lower is better)
Translates to: VFWDNLSEADHSKDLIYPEHGTH*RFQSKD
Trigger: GTCCTTGGACTGGAATCTCCAGTGTGTGCCATGTTC...TGGATAAATCAGGTCCTTGGAATGATCAGCCTCTGATAGATTGTCCCAGAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR-3UTR TCA 90 bp GAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCATTCGACGTTTTGCCTaGAGACTGTTAATTGTTGTG +
Preference number: 2 (lower is better)
Translates to: ESESMFTGTEHPGGATRSIRRFA*RLLIVV
Trigger: CACAACAATTAACAGTCTTCAGGCAAAACGTCGAAT...GCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp CCGTCTGCTCTTCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTATTCGACGTTTTGCCTaGAGACTGTTAATTGTTGTG +
Preference number: 2 (lower is better)
Translates to: PSALQMVIRPTTWKANLCIRRFA*RLLIVV
Trigger: CACAACAATTAACAGTCTTCAGGCAAAACGTCGAAT...ACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGAAGAGCAGACGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp ATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGATTGGCAGTAAATAGCTaGTTCGACGTTTTGCCTGAA +
Preference number: 2 (lower is better)
Translates to: MESESMFTGTEHPGGATRLAVNS*FDVLPE
Trigger: TTCAGGCAAAACGTCGAATCAGCTATTTACTGCCAA...TCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp TATGCATCATGTGAGTCATATGCAAAGAGTCTCTTCTTCAGGCCAGGGAGGCATGCAAAGAAATGCAAGTaGATGAACACCTTCTCCCCA +
Preference number: 2 (lower is better)
Translates to: YASCESYAKSLFFRPGRHAKKCK*MNTFSP
Trigger: TGGGGAGAAGGTGTTCATTCACTTGCATTTCTTTGC...ATGCCTCCCTGGCCTGAAGAAGAGACTCTTTGCATATGACTCACATGATGCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp CCAGAAACAATCACACCACAGCACATGACTGAAAACTCTATGAGAAATAGTGTGTTCATAAGCAGTCCCTaGAACCTCCCTCCGGTTCCA +
Preference number: 2 (lower is better)
Translates to: PETITPQHMTENSMRNSVFISSP*NLPPVP
Trigger: TGGAACCGGAGGGAGGTTTCAGGGACTGCTTATGAA...CACACTATTTCTCATAGAGTTTTCAGTCATGTGCTGTGGTGTGATTGTTTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR-3UTR GCA 90 bp TTTCCAAAAGGTTTAGGTGCATGGATTTACTCAGTATCTACACTACAGTCTTATATGGGCCGTGGCCATTaGCTCTCCTCACGTTCCCAG +
Preference number: 2 (lower is better)
Translates to: FPKGLGAWIYSVSTLQSYMGRGH*LSSRSQ
Trigger: CTGGGAACGTGAGGAGAGGCAATGGCCACGGCCCAT...ATAAGACTGTAGTGTAGATACTGAGTAAATCCATGCACCTAAACCTTTTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR GCA 90 bp AATGCAATCCACTGTCACTCTTGCAAATTCTACCTTGGAGGGAAAAACTTAATGAGCCAACGTGCCATGTaGTACAGCCAAAATGGGCCG +
Preference number: 2 (lower is better)
Translates to: NAIHCHSCKFYLGGKNLMSQRAM*YSQNGP
Trigger: CGGCCCATTTTGGCTGTAGCACATGGCACGTTGGCT...CATTAAGTTTTTCCCTCCAAGGTAGAATTTGCAAGAGTGACAGTGGATTGCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR GCA 90 bp AGACATATCCAGCTTGAAATTTATACCATTGCACTGCCAAACGGAGCTGCACTTAGAGTTTTCTGCCCCTaGCAAATCTTCGGAGACGAC +
Preference number: 2 (lower is better)
Translates to: RHIQLEIYTIALPNGAALRVFCP*QIFGDD
Trigger: GTCGTCTCCGAAGATTTGGCAGGGGCAGAAAACTCT...AAGTGCAGCTCCGTTTGGCAGTGCAATGGTATAAATTTCAAGCTGGATATGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR GCA 90 bp GTTATGGAACACAAAAGTCAAACAGATTTCCTCAGCCTCACAAGGTTCCAATTTCCGGTTCCAACAAGCTaGTCAAGCCAGGAAACGGTG +
Preference number: 2 (lower is better)
Translates to: VMEHKSQTDFLSLTRFQFPVPTS*SSQETV
Trigger: CACCGTTTCCTGGCTTGAGCAGCTTGTTGGAACCGG...AAATTGGAACCTTGTGAGGCTGAGGAAATCTGTTTGACTTTTGTGTTCCATAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR-3UTR CCA 90 bp TCGACGTTTTGCCTGAAGACTGTTAATTGTTGTGTGTGTGTGTGTCTGTCTGTGACACGAAGCGGTGCTTaGCAATTAGTGGTCGGATTT +
Preference number: 2 (lower is better)
Translates to: STFCLKTVNCCVCVCLSVTRSGA*QLVVGF
Trigger: AAATCCGACCACTAATTGCCAAGCACCGCTTCGTGT...CACAGACAGACACACACACACACAACAATTAACAGTCTTCAGGCAAAACGTCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CCA 90 bp GTGAGATGCATATTTCATGATTGTCCAAGGTCATGGTTGTCCAAAGACATGGAAAATACTGTACAGTTCTaGGGCCAAGAGGCTGGGCAC +
Preference number: 2 (lower is better)
Translates to: VRCIFHDCPRSWLSKDMENTVQF*GQEAGH
Trigger: GTGCCCAGCCTCTTGGCCCCAGAACTGTACAGTATT...TTCCATGTCTTTGGACAACCATGACCTTGGACAATCATGAAATATGCATCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CCA 90 bp GGTGCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGATGGGACTGTTAAAGACTTTTAGATaGCAGGCGTTATCGGTCAGG +
Preference number: 2 (lower is better)
Translates to: GAWQLVVGFPKTGVLMGLLKTFR*QALSVR
Trigger: CCTGACCGATAACGCCTGCCATCTAAAAGTCTTTAA...CAGTCCCATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678349.1
3UTR-3UTR CCA 90 bp CTTCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAAACGCTAGATCTTTaGATCTCCACGACTAGCAAG +
Preference number: 2 (lower is better)
Translates to: LQMVIRPTTWKANLCLQAQTLDL*ISTTSK
Trigger: CTTGCTAGTCGTGGAGATCCAAAGATCTAGCGTTTG...TGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678349.1
3UTR-3UTR CCA 90 bp TCTCACAAATGTTCTTCAAAGCCACAGGTATCAATCACTTCAACTAAAGTAAGGAGGAAACGGTGGTCCTaGGGACTCCTGGACCTTCAG +
Preference number: 2 (lower is better)
Translates to: SHKCSSKPQVSITSTKVRRKRWS*GLLDLQ
Trigger: CTGAAGGTCCAGGAGTCCCCAGGACCACCGTTTCCT...CCTTACTTTAGTTGAAGTGATTGATACCTGTGGCTTTGAAGAACATTTGTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR-3UTR CCA 90 bp CACAATGCCTTATTCAGACCTAGGAATAAATCCACACTCCACTCTACAGCCAATGTAGTATTCAGGAGATaGGCTAATCCACGGAGCCCT +
Preference number: 2 (lower is better)
Translates to: HNALFRPRNKSTLHSTANVVFRR*ANPRSP
Trigger: AGGGCTCCGTGGATTAGCCCATCTCCTGAATACTAC...ATTGGCTGTAGAGTGGAGTGTGGATTTATTCCTAGGTCTGAATAAGGCATTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR CAA 90 bp CCAGTGTTCCCATCTTCTGTGCTCAGCTTGGTATGCAGAACAACCTaGTTGTTGATAGGATGTTTGCTTGAAGTTATTTTTCTGGGGCAG +
Preference number: 2 (lower is better)
Translates to: PVFPSSVLSLVCRTT*LLIGCLLEVIFLGQ
Trigger: CTGCCCCAGAAAAATAACTTCAAGCAAACATCCTATCAACAACAAGGTTGTTCTGCATACCAAGCTGAGCACAGAAGATGGGAACACTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp AGCGGTGCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGATGGGAATTCGACGTTTTGCCTaGAGACTGTTAATTGTTGTG +
Preference number: 2 (lower is better)
Translates to: SGAWQLVVGFPKTGVLMGIRRFA*RLLIVV
Trigger: CACAACAATTAACAGTCTTCAGGCAAAACGTCGAAT...TCCCATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACCGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp GCAACATCAACTACTCTTAGAGCAAGTGCAGCCACAATACTGTACAGTTCTGGGTTGGCAGTAAATAGCTaGTTCGACGTTTTGCCTGAA +
Preference number: 2 (lower is better)
Translates to: ATSTTLRASAATILYSSGLAVNS*FDVLPE
Trigger: TTCAGGCAAAACGTCGAATCAGCTATTTACTGCCAA...CCCAGAACTGTACAGTATTGTGGCTGCACTTGCTCTAAGAGTAGTTGATGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp AACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCTTGGCAGTAAATAGCTaGTTCGACGTTTTGCCTGAA +
Preference number: 2 (lower is better)
Translates to: NNMESESMFTGTEHPGGALAVNS*FDVLPE
Trigger: TTCAGGCAAAACGTCGAATCAGCTATTTACTGCCAA...GGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp GTTTCTCATTTGTCACACAAGGTTCTTCGCAGAGGCATCACATCGACCCCAATATTGGCAGTAAATAGCTaGTTCGACGTTTTGCCTGAA +
Preference number: 2 (lower is better)
Translates to: VSHLSHKVLRRGITSTPILAVNS*FDVLPE
Trigger: TTCAGGCAAAACGTCGAATCAGCTATTTACTGCCAA...TATTGGGGTCGATGTGATGCCTCTGCGAAGAACCTTGTGTGACAAATGAGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp GGGTGCGTATCCAAAATATATGAATATACACAATCAGGGCTTAAGGTACTGGATCTGCTCTTCAGATGGTaGTCCGGCCAACAACATGGA +
Preference number: 2 (lower is better)
Translates to: GCVSKIYEYTQSGLKVLDLLFRW*SGQQHG
Trigger: TCCATGTTGTTGGCCGGATCACCATCTGAAGAGCAG...ATCCAGTACCTTAAGCCCTGATTGTGTATATTCATATATTTTGGATACGCACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp GTCACCGAAATGTTCACTTCCTCAAGTTCCAGAGGATTCTGTTTCTTACTCAGAAGAAATGCAAGTGAATaGACACCTTCTCCCCAGCCT +
Preference number: 2 (lower is better)
Translates to: VTEMFTSSSSRGFCFLLRRNASE*TPSPQP
Trigger: AGGCTGGGGAGAAGGTGTTCATTCACTTGCATTTCT...TCTGAGTAAGAAACAGAATCCTCTGGAACTTGAGGAAGTGAACATTTCGGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp GCAACATCAACTACTCTTAGAGCAAGTGCAGCCACAATACTGTACAGTTCTGGGCAGGTATGCATCATGTaGGTCATATGCAAAGAGTCT +
Preference number: 2 (lower is better)
Translates to: ATSTTLRASAATILYSSGQVCIM*VICKES
Trigger: AGACTCTTTGCATATGACTCACATGATGCATACCTG...CCCAGAACTGTACAGTATTGTGGCTGCACTTGCTCTAAGAGTAGTTGATGTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp TATGCATCATGTGAGTCATATGCAAAGAGTCTCTTCTTCAGGCCAGGGAGGCATCAGGTATGCATCATGTaGGTCATATGCAAAGAGTCT +
Preference number: 2 (lower is better)
Translates to: YASCESYAKSLFFRPGRHQVCIM*VICKES
Trigger: AGACTCTTTGCATATGACTCACATGATGCATACCTG...ATGCCTCCCTGGCCTGAAGAAGAGACTCTTTGCATATGACTCACATGATGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp GTAGCTGAGACTCAGGGCTTATCTCACCTTCTCAGAATGCTTTTGAAGAATCAAGGTACTAGGTCCATCTaGAGTTCCCAACTCTTTTCC +
Preference number: 2 (lower is better)
Translates to: VAETQGLSHLLRMLLKNQGTRSI*SSQLFS
Trigger: GGAAAAGAGTTGGGAACTTCAGATGGACCTAGTACC...TTGATTCTTCAAAAGCATTCTGAGAAGGTGAGATAAGCCCTGAGTCTCAGCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp GTTTCTCATTTGTCACACAAGGTTCTTCGCAGAGGCATCACATCGACCCCAATAGGGTCAATTAATCCATaGCACCTCACTTCAATGCTT +
Preference number: 2 (lower is better)
Translates to: VSHLSHKVLRRGITSTPIGSINP*HLTSML
Trigger: AAGCATTGAAGTGAGGTGTCATGGATTAATTGACCC...TATTGGGGTCGATGTGATGCCTCTGCGAAGAACCTTGTGTGACAAATGAGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp ATGGAACAGAATGATTCACTGGGTAAGACTAAAGGACTTGTATTATCACTCTCCTGGGTGGGTCTGTGTTaGAACAGGCCACGTAAAGCA +
Preference number: 2 (lower is better)
Translates to: MEQNDSLGKTKGLVLSLSWVGLC*NRPRKA
Trigger: TGCTTTACGTGGCCTGTTTCAACACAGACCCACCCA...GGAGAGTGATAATACAAGTCCTTTAGTCTTACCCAGTGAATCATTCTGTTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp GGGCCCACGGCAGATTTTCCAAAAGGTTTAGGTGCATGGATTTACTCAGTATCTCTGACTCCATTAAAATaGTTTTGGCAGGATAGCAGC +
Preference number: 2 (lower is better)
Translates to: GPTADFPKGLGAWIYSVSLTPLK*FWQDSS
Trigger: GCTGCTATCCTGCCAAAATCATTTTAATGGAGTCAG...AGATACTGAGTAAATCCATGCACCTAAACCTTTTGGAAAATCTGCCGTGGGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp AAGGTTCTTCGCAGAGGCATCACATCGACCCCAATACAGGTCCTTCATACCCTTGTTAAGATGCAGATGTaGATCCCTCTTCAATACAAA +
Preference number: 2 (lower is better)
Translates to: KVLRRGITSTPIQVLHTLVKMQM*IPLQYK
Trigger: TTTGTATTGAAGAGGGATTCACATCTGCATCTTAAC...AAGGGTATGAAGGACCTGTATTGGGGTCGATGTGATGCCTCTGCGAAGAACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp AATGATTTTGGCAGGATAGCAGCACAGGATTGGATATTCCATATTCATCACTTTCCACCAGGGCCAAACTaGGCAGAGTCTTCAGAGACA +
Preference number: 2 (lower is better)
Translates to: NDFGRIAAQDWIFHIHHFPPGPN*AESSET
Trigger: TGTCTCTGAAGACTCTGCTCAGTTTGGCCCTGGTGG...AAAGTGATGAATATGGAATATCCAATCCTGTGCTGCTATCCTGCCAAAATCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678134.1
ENST00000678349.1
3UTR-3UTR GCA 90 bp AAACATGCATGTAATCCTGAATACCATGAATTAAATGCGGAATTGCCCAGGGACGCCACACCCCTCTACTaGTCTTTCTTGACAGTGGAA +
Preference number: 2 (lower is better)
Translates to: KHACNPEYHELNAELPRDATPLY*SFLTVE
Trigger: TTCCACTGTCAAGAAAGAGCAGTAGAGGGGTGTGGC...GTCCCTGGGCAATTCCGCATTTAATTCATGGTATTCAGGATTACATGCATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CCA 90 bp GTAGCTGAGACTCAGGGCTTATCTCACCTTCTCAGAATGCTTTTGAAGAATCAAGCGTGGAAATCTCAGTaGGTACTAGGTCCATCTGAA +
Preference number: 2 (lower is better)
Translates to: VAETQGLSHLLRMLLKNQAWKSQ*VLGPSE
Trigger: TTCAGATGGACCTAGTACCCACTGAGATTTCCACGC...TTGATTCTTCAAAAGCATTCTGAGAAGGTGAGATAAGCCCTGAGTCTCAGCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CCA 90 bp CCCAGGGCCTCTGTTCCTTCCCTCTACAGTGATACATGTCTTAAGAAGGGTCGTCAGGGCTTAAGGTACTaGATGATATTGTATAAATTG +
Preference number: 2 (lower is better)
Translates to: PRASVPSLYSDTCLKKGRQGLRY*MILYKL
Trigger: CAATTTATACAATATCATCCAGTACCTTAAGCCCTG...ACGACCCTTCTTAAGACATGTATCACTGTAGAGGGAAGGAACAGAGGCCCTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CCA 90 bp TTTCCAAAAGGTTTAGGTGCATGGATTTACTCAGTATCTACACTACAGTCTTATGGCGGCCTGATGCTCTaGGTAACTCTAGCCTTCCTG +
Preference number: 2 (lower is better)
Translates to: FPKGLGAWIYSVSTLQSYGGLML*VTLAFL
Trigger: CAGGAAGGCTAGAGTTACCCAGAGCATCAGGCCGCC...ATAAGACTGTAGTGTAGATACTGAGTAAATCCATGCACCTAAACCTTTTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CCA 90 bp TTTTTAGAGCCCTTGTCCCCAATTTGGAAAGTGCATATACTCTATTTAACTCTGGTGCTACAGCCAAAATaGGCCGTGGCCATTGCCTCT +
Preference number: 2 (lower is better)
Translates to: FLEPLSPIWKVHILYLTLVLQPK*AVAIAS
Trigger: AGAGGCAATGGCCACGGCCCATTTTGGCTGTAGCAC...CAGAGTTAAATAGAGTATATGCACTTTCCAAATTGGGGACAAGGGCTCTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp CAAGTTCCAGAGGATTCTGTTTCTTACTCAGACAGAGCCAGTATTGGGAGTTGGATTCGACGTTTTGCCTaGAGACTGTTAATTGTTGTG +
Preference number: 2 (lower is better)
Translates to: QVPEDSVSYSDRASIGSWIRRFA*RLLIVV
Trigger: CACAACAATTAACAGTCTTCAGGCAAAACGTCGAAT...CCAACTCCCAATACTGGCTCTGTCTGAGTAAGAAACAGAATCCTCTGGAACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp CTGTCACTCTTGCAAATTCTACCTTGGAGGGAAAAACTTAATGAAATGAGCTATCTGCTCTTCAGATGGTaGTCCGGCCAACAACATGGA +
Preference number: 2 (lower is better)
Translates to: LSLLQILPWREKLNEMSYLLFRW*SGQQHG
Trigger: TCCATGTTGTTGGCCGGATCACCATCTGAAGAGCAG...ATAGCTCATTTCATTAAGTTTTTCCCTCCAAGGTAGAATTTGCAAGAGTGACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp GTGAGATGCATATTTCATGATTGTCCAAGGTCATGGTTGTCCAAAGACATGGAATTGACAGTGGAATTCTaGGCTCCATCAGCTTCCAGA +
Preference number: 2 (lower is better)
Translates to: VRCIFHDCPRSWLSKDMELTVEF*APSASR
Trigger: TCTGGAAGCTGATGGAGCTCAGAATTCCACTGTCAA...TTCCATGTCTTTGGACAACCATGACCTTGGACAATCATGAAATATGCATCTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp AGATGCATATTTCATGATTGTCCAAGGTCATGGTTGTCCAAAGACATGGAACAGCAGCTTGAGAAACACTaGAGGGGTACCATTTACCAC +
Preference number: 2 (lower is better)
Translates to: RCIFHDCPRSWLSKDMEQQLEKH*RGTIYH
Trigger: GTGGTAAATGGTACCCCTTCAGTGTTTCTCAAGCTG...CTGTTCCATGTCTTTGGACAACCATGACCTTGGACAATCATGAAATATGCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678349.1
3UTR-3UTR GCA 90 bp GATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGCTGATTCGACGTTTTaGCTGAAGACTGTTAATTGT +
Preference number: 2 (lower is better)
Translates to: DPANNMESESMFTGTEHPADSTF*LKTVNC
Trigger: ACAATTAACAGTCTTCAGGCAAAACGTCGAATCAGC...TGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR GCA 90 bp CAAGTTCCAGAGGATTCTGTTTCTTACTCAGACAGAGCCAGTATTGGGAGTTGGGCTGATTCGACGTTTTaGCTGAAGACTGTTAATTGT +
Preference number: 2 (lower is better)
Translates to: QVPEDSVSYSDRASIGSWADSTF*LKTVNC
Trigger: ACAATTAACAGTCTTCAGGCAAAACGTCGAATCAGC...CCAACTCCCAATACTGGCTCTGTCTGAGTAAGAAACAGAATCCTCTGGAACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR GCA 90 bp TATGGAACACAAAAGTCAAACAGATTTCCTCAGCCTCACAAGGTTCCAATTTTCGGAGCTTGTTTGGGATaGAGACTGTCAAGACCCAAC +
Preference number: 2 (lower is better)
Translates to: YGTQKSNRFPQPHKVPIFGACLG*RLSRPN
Trigger: GTTGGGTCTTGACAGTCTGCATCCCAAACAAGCTCC...GAAAATTGGAACCTTGTGAGGCTGAGGAAATCTGTTTGACTTTTGTGTTCCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR-3UTR GCA 90 bp ATACCCATTAGACATATCCAGCTTGAAATTTATACCATTGCACTGCCAAACGGAGGAGCTTGTTTGGGATaGAGACTGTCAAGACCCAAC +
Preference number: 2 (lower is better)
Translates to: IPIRHIQLEIYTIALPNGGACLG*RLSRPN
Trigger: GTTGGGTCTTGACAGTCTGCATCCCAAACAAGCTCC...TCCGTTTGGCAGTGCAATGGTATAAATTTCAAGCTGGATATGTCTAATGGGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678349.1
3UTR-3UTR CCA 90 bp GTGAGATGCATATTTCATGATTGTCCAAGGTCATGGTTGTCCAAAGACATGGAATGTCAGCTGTCATTCTaGCCTCTCTTGCGGAGTATT +
Preference number: 2 (lower is better)
Translates to: VRCIFHDCPRSWLSKDMECQLSF*PLLRSI
Trigger: AATACTCCGCAAGAGAGGCCAGAATGACAGCTGACA...TTCCATGTCTTTGGACAACCATGACCTTGGACAATCATGAAATATGCATCTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR CAA 90 bp GTCACAATAAACAATTCTGTTGACGTGGAAATGCACATGACTTGGTaGAAACAAAGCTCCTCAGTGGCCAGTGACATCCAGGTTTTTCTT +
Preference number: 2 (lower is better)
Translates to: VTINNSVDVEMHMTW*KQSSSVASDIQVFL
Trigger: AAGAAAAACCTGGATGTCACTGGCCACTGAGGAGCTTTGTTTCAACCAAGTCATGTGCATTTCCACGTCAACAGAATTGTTTATTGTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR CAA 90 bp GACAATGCATATTATTTCTACTGCTTTAGTGAACCTTTTGCATATTaGTTTGGGGCAGGCATGTTGACTTCACTTGTGGCCCAGATAGGC +
Preference number: 2 (lower is better)
Translates to: DNAYYFYCFSEPFAY*FGAGMLTSLVAQIG
Trigger: GCCTATCTGGGCCACAAGTGAAGTCAACATGCCTGCCCCAAACAAATATGCAAAAGGTTCACTAAAGCAGTAGAAATAATATGCATTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp GGGCCCACGGCAGATTTTCCAAAAGGTTTAGGTGCATGGATTTACTCAGTATCTTCTGTGAATCCCGTTTaGACAACAACAAAAGACAAA +
Preference number: 2 (lower is better)
Translates to: GPTADFPKGLGAWIYSVSSVNPV*TTTKDK
Trigger: TTTGTCTTTTGTTGTTGTTCAAACGGGATTCACAGA...AGATACTGAGTAAATCCATGCACCTAAACCTTTTGGAAAATCTGCCGTGGGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp GTCTTCTGGGACAATCTATCAGAGGCTGATCATTCCAAGGACCTGATTTATCCATTTGGCCTCCTAGTATaGGCACACTTTGTAAAATGT +
Preference number: 2 (lower is better)
Translates to: VFWDNLSEADHSKDLIYPFGLLV*AHFVKC
Trigger: ACATTTTACAAAGTGTGCTCATACTAGGAGGCCAAA...TGGATAAATCAGGTCCTTGGAATGATCAGCCTCTGATAGATTGTCCCAGAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR-3UTR TCA 90 bp CCAGAAACAATCACACCACAGCACATGACTGAAAACTCTATGAGAAATAGTGTGCAATCTATCAGAGGCTaGTCATTCCAAGGACCTGAT +
Preference number: 2 (lower is better)
Translates to: PETITPQHMTENSMRNSVQSIRG*SFQGPD
Trigger: ATCAGGTCCTTGGAATGATCAGCCTCTGATAGATTG...CACACTATTTCTCATAGAGTTTTCAGTCATGTGCTGTGGTGTGATTGTTTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR-3UTR TCA 90 bp GTAGCTGAGACTCAGGGCTTATCTCACCTTCTCAGAATGCTTTTGAAGAATCAAACTCTTCCCTTCTCCTaGGATCAAACTCTAGAACTA +
Preference number: 2 (lower is better)
Translates to: VAETQGLSHLLRMLLKNQTLPFS*DQTLEL
Trigger: TAGTTCTAGAGTTTGATCTCAGGAGAAGGGAAGAGT...TTGATTCTTCAAAAGCATTCTGAGAAGGTGAGATAAGCCCTGAGTCTCAGCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678134.1
3UTR-3UTR GCA 90 bp AATGCAATCCACTGTCACTCTTGCAAATTCTACCTTGGAGGGAAAAACTTAATGCTTTTTCCATCCGTCTaGTCTTCAGATGGTGATCCG +
Preference number: 2 (lower is better)
Translates to: NAIHCHSCKFYLGGKNLMLFPSV*SSDGDP
Trigger: CGGATCACCATCTGAAGAGCAGACGGATGGAAAAAG...CATTAAGTTTTTCCCTCCAAGGTAGAATTTGCAAGAGTGACAGTGGATTGCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR GCA 90 bp CTGTCACTCTTGCAAATTCTACCTTGGAGGGAAAAACTTAATGAAATGAGCTATACTGCCAAACGGAGCTaGACTTTGAGCCATGCTGAT +
Preference number: 2 (lower is better)
Translates to: LSLLQILPWREKLNEMSYTAKRS*TLSHAD
Trigger: ATCAGCATGGCTCAAAGTGCAGCTCCGTTTGGCAGT...ATAGCTCATTTCATTAAGTTTTTCCCTCCAAGGTAGAATTTGCAAGAGTGACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR GCA 90 bp GGGCCCACGGCAGATTTTCCAAAAGGTTTAGGTGCATGGATTTACTCAGTATCTTCCAAAAGGTTTAGGTaGATGGATTTACTCAGTATC +
Preference number: 2 (lower is better)
Translates to: GPTADFPKGLGAWIYSVSSKRFR*MDLLSI
Trigger: GATACTGAGTAAATCCATGCACCTAAACCTTTTGGA...AGATACTGAGTAAATCCATGCACCTAAACCTTTTGGAAAATCTGCCGTGGGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR GCA 90 bp AACTCAATCCCTTGCCTGCAAGAGTCCCTTTGTCTTAAAGAAGCTGCAAGGTCAGAAAAAGAAATGACTTaGAGTCTAAAGCCTGGAGTA +
Preference number: 2 (lower is better)
Translates to: NSIPCLQESLCLKEAARSEKEMT*SLKPGV
Trigger: TACTCCAGGCTTTAGACTGCAAGTCATTTCTTTTTC...TGACCTTGCAGCTTCTTTAAGACAAAGGGACTCTTGCAGGCAAGGGATTGAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR-3UTR CCA 90 bp CCTCCCACCAGGTATGCATCATGTGAGTCATATGCAAAGAGTCTCTTCTTCAGGCAGGGCTTAAGGTACTaGATGATATTGTATAAATTG +
Preference number: 2 (lower is better)
Translates to: PPTRYASCESYAKSLFFRQGLRY*MILYKL
Trigger: CAATTTATACAATATCATCCAGTACCTTAAGCCCTG...CCTGAAGAAGAGACTCTTTGCATATGACTCACATGATGCATACCTGGTGGGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CCA 90 bp ATACCCATTAGACATATCCAGCTTGAAATTTATACCATTGCACTGCCAAACGGAAACAAAGCTCCTCAGTaGCCAGTGACATCCAGGTTT +
Preference number: 2 (lower is better)
Translates to: IPIRHIQLEIYTIALPNGNKAPQ*PVTSRF
Trigger: AAACCTGGATGTCACTGGCCACTGAGGAGCTTTGTT...TCCGTTTGGCAGTGCAATGGTATAAATTTCAAGCTGGATATGTCTAATGGGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CCA 90 bp AATGATTTTGGCAGGATAGCAGCACAGGATTGGATATTCCATATTCATCACTTTTTCCTGCTTTCTTGGTaGAGCGTAAGCACCACTGCA +
Preference number: 2 (lower is better)
Translates to: NDFGRIAAQDWIFHIHHFFLLSW*SVSTTA
Trigger: TGCAGTGGTGCTTACGCTCCACCAAGAAAGCAGGAA...AAAGTGATGAATATGGAATATCCAATCCTGTGCTGCTATCCTGCCAAAATCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CCA 90 bp AGACATATCCAGCTTGAAATTTATACCATTGCACTGCCAAACGGAGCTGCACTTCCTAATTTTTCCCACTaGGCCAGAGCTACATCTTTA +
Preference number: 2 (lower is better)
Translates to: RHIQLEIYTIALPNGAALPNFSH*ARATSL
Trigger: TAAAGATGTAGCTCTGGCCCAGTGGGAAAAATTAGG...AAGTGCAGCTCCGTTTGGCAGTGCAATGGTATAAATTTCAAGCTGGATATGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CCA 90 bp AATCAAATGTTTTGCTGGATGTGGACTGCCTTGAGAAAGGAAAAACTGCTTGCTCAAACGCTAGATCTTTaGATCTCCACGACTAGCAAG +
Preference number: 2 (lower is better)
Translates to: NQMFCWMWTALRKEKLLAQTLDL*ISTTSK
Trigger: CTTGCTAGTCGTGGAGATCCAAAGATCTAGCGTTTG...AGCAAGCAGTTTTTCCTTTCTCAAGGCAGTCCACATCCAGCAAAACATTTGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR-3UTR TCA 90 bp TTCTACTGCTTTAGTGAACCTTTTGCATATTTGTTTGGGGCAGGCATGTTGACTTTGGCAGTAAATAGCTaGTTCGACGTTTTGCCTGAA +
Preference number: 2 (lower is better)
Translates to: FYCFSEPFAYLFGAGMLTLAVNS*FDVLPE
Trigger: TTCAGGCAAAACGTCGAATCAGCTATTTACTGCCAA...AGTCAACATGCCTGCCCCAAACAAATATGCAAAAGGTTCACTAAAGCAGTAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp TTTTTAGAGCCCTTGTCCCCAATTTGGAAAGTGCATATACTCTATTTAACTCTGGGTACTAGGTCCATCTaGAGTTCCCAACTCTTTTCC +
Preference number: 2 (lower is better)
Translates to: FLEPLSPIWKVHILYLTLGTRSI*SSQLFS
Trigger: GGAAAAGAGTTGGGAACTTCAGATGGACCTAGTACC...CAGAGTTAAATAGAGTATATGCACTTTCCAAATTGGGGACAAGGGCTCTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp GTGAGATGCATATTTCATGATTGTCCAAGGTCATGGTTGTCCAAAGACATGGAAGGGTCAATTAATCCATaGCACCTCACTTCAATGCTT +
Preference number: 2 (lower is better)
Translates to: VRCIFHDCPRSWLSKDMEGSINP*HLTSML
Trigger: AAGCATTGAAGTGAGGTGTCATGGATTAATTGACCC...TTCCATGTCTTTGGACAACCATGACCTTGGACAATCATGAAATATGCATCTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp GTCTTCTGGGACAATCTATCAGAGGCTGATCATTCCAAGGACCTGATTTATCCAAAATTAGGTCCACTCTaGGTGGTGAAAAACAAAAGA +
Preference number: 2 (lower is better)
Translates to: VFWDNLSEADHSKDLIYPKLGPL*VVKNKR
Trigger: TCTTTTGTTTTTCACCACTCAGAGTGGACCTAATTT...TGGATAAATCAGGTCCTTGGAATGATCAGCCTCTGATAGATTGTCCCAGAAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR-3UTR GCA 90 bp GTGAGATGCATATTTCATGATTGTCCAAGGTCATGGTTGTCCAAAGACATGGAACCACGTGGAGCATACTaGAAACTGACTCCATTAAAA +
Preference number: 2 (lower is better)
Translates to: VRCIFHDCPRSWLSKDMEPRGAY*KLTPLK
Trigger: TTTTAATGGAGTCAGTTTGCAGTATGCTCCACGTGG...TTCCATGTCTTTGGACAACCATGACCTTGGACAATCATGAAATATGCATCTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CCA 90 bp CAAGTTCCAGAGGATTCTGTTTCTTACTCAGACAGAGCCAGTATTGGGAGTTGGCAGGGCTTAAGGTACTaGATGATATTGTATAAATTG +
Preference number: 2 (lower is better)
Translates to: QVPEDSVSYSDRASIGSWQGLRY*MILYKL
Trigger: CAATTTATACAATATCATCCAGTACCTTAAGCCCTG...CCAACTCCCAATACTGGCTCTGTCTGAGTAAGAAACAGAATCCTCTGGAACTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CCA 90 bp CTGTCACTCTTGCAAATTCTACCTTGGAGGGAAAAACTTAATGAAATGAGCTATAACAAAGCTCCTCAGTaGCCAGTGACATCCAGGTTT +
Preference number: 2 (lower is better)
Translates to: LSLLQILPWREKLNEMSYNKAPQ*PVTSRF
Trigger: AAACCTGGATGTCACTGGCCACTGAGGAGCTTTGTT...ATAGCTCATTTCATTAAGTTTTTCCCTCCAAGGTAGAATTTGCAAGAGTGACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CCA 90 bp TTTCCAAAAGGTTTAGGTGCATGGATTTACTCAGTATCTACACTACAGTCTTATTTCCTGCTTTCTTGGTaGAGCGTAAGCACCACTGCA +
Preference number: 2 (lower is better)
Translates to: FPKGLGAWIYSVSTLQSYFLLSW*SVSTTA
Trigger: TGCAGTGGTGCTTACGCTCCACCAAGAAAGCAGGAA...ATAAGACTGTAGTGTAGATACTGAGTAAATCCATGCACCTAAACCTTTTGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CCA 90 bp TTTTTAGAGCCCTTGTCCCCAATTTGGAAAGTGCATATACTCTATTTAACTCTGCTGGGGCCAAGAGGCTaGGCACATTTACTGTTATTA +
Preference number: 2 (lower is better)
Translates to: FLEPLSPIWKVHILYLTLLGPRG*AHLLLL
Trigger: TAATAACAGTAAATGTGCCCAGCCTCTTGGCCCCAG...CAGAGTTAAATAGAGTATATGCACTTTCCAAATTGGGGACAAGGGCTCTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CCA 90 bp ATGGAACAGAATGATTCACTGGGTAAGACTAAAGGACTTGTATTATCACTCTCCGTAACCACATTTGTCTaGGCTGCAAAAGACACCACA +
Preference number: 2 (lower is better)
Translates to: MEQNDSLGKTKGLVLSLSVTTFV*AAKDTT
Trigger: TGTGGTGTCTTTTGCAGCCCAGACAAATGTGGTTAC...GGAGAGTGATAATACAAGTCCTTTAGTCTTACCCAGTGAATCATTCTGTTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CCA 90 bp CCAGAAACAATCACACCACAGCACATGACTGAAAACTCTATGAGAAATAGTGTGTTAAAGACTTTTAGATaGCAGGCGTTATCGGTCAGG +
Preference number: 2 (lower is better)
Translates to: PETITPQHMTENSMRNSVLKTFR*QALSVR
Trigger: CCTGACCGATAACGCCTGCCATCTAAAAGTCTTTAA...CACACTATTTCTCATAGAGTTTTCAGTCATGTGCTGTGGTGTGATTGTTTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR-3UTR CCA 90 bp CCAGAAACAATCACACCACAGCACATGACTGAAAACTCTATGAGAAATAGTGTGCCAGTCCAAGGACTTTaGAATGTCAACTTAGCTCTT +
Preference number: 2 (lower is better)
Translates to: PETITPQHMTENSMRNSVPVQGL*NVNLAL
Trigger: AAGAGCTAAGTTGACATTCCAAAGTCCTTGGACTGG...CACACTATTTCTCATAGAGTTTTCAGTCATGTGCTGTGGTGTGATTGTTTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR-3UTR CCA 90 bp CCAGAAACAATCACACCACAGCACATGACTGAAAACTCTATGAGAAATAGTGTGACAATAGTGGACACCTaGGAAATACTCGGTATTCCA +
Preference number: 2 (lower is better)
Translates to: PETITPQHMTENSMRNSVTIVDT*EILGIP
Trigger: TGGAATACCGAGTATTTCCCAGGTGTCCACTATTGT...CACACTATTTCTCATAGAGTTTTCAGTCATGTGCTGTGGTGTGATTGTTTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR CAA 90 bp GATTACCATCTTGTCAACAGAATAAAGCCAATCTCCTACAATCTCTaGTCTGAATCATCTCATTCTTCTAGTGGCTCCTATCTCACTCTC +
Preference number: 2 (lower is better)
Translates to: DYHLVNRIKPISYNL*SESSHSSSGSYLTL
Trigger: GAGAGTGAGATAGGAGCCACTAGAAGAATGAGATGATTCAGACAAGAGATTGTAGGAGATTGGCTTTATTCTGTTGACAAGATGGTAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR-3UTR TCA 90 bp TTTTTAGAGCCCTTGTCCCCAATTTGGAAAGTGCATATACTCTATTTAACTCTGGCAAAGAAATGCAAGTaGATGAACACCTTCTCCCCA +
Preference number: 2 (lower is better)
Translates to: FLEPLSPIWKVHILYLTLAKKCK*MNTFSP
Trigger: TGGGGAGAAGGTGTTCATTCACTTGCATTTCTTTGC...CAGAGTTAAATAGAGTATATGCACTTTCCAAATTGGGGACAAGGGCTCTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp CCCACGGCAGATTTTCCAAAAGGTTTAGGTGCATGGATTTACTCAGTATCTACACACAGCATTAAACATTaGACAGAGTACATTCCAAAG +
Preference number: 2 (lower is better)
Translates to: PTADFPKGLGAWIYSVSTHSIKH*TEYIPK
Trigger: CTTTGGAATGTACTCTGTTCAATGTTTAATGCTGTG...TGTAGATACTGAGTAAATCCATGCACCTAAACCTTTTGGAAAATCTGCCGTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp ATGGAACAGAATGATTCACTGGGTAAGACTAAAGGACTTGTATTATCACTCTCCCTGACTCCATTAAAATaGTTTTGGCAGGATAGCAGC +
Preference number: 2 (lower is better)
Translates to: MEQNDSLGKTKGLVLSLSLTPLK*FWQDSS
Trigger: GCTGCTATCCTGCCAAAATCATTTTAATGGAGTCAG...GGAGAGTGATAATACAAGTCCTTTAGTCTTACCCAGTGAATCATTCTGTTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp ATGGAACAGAATGATTCACTGGGTAAGACTAAAGGACTTGTATTATCACTCTCCAAACTTCCAACTCCCTaGTCCAAACTTGGGAATGTT +
Preference number: 2 (lower is better)
Translates to: MEQNDSLGKTKGLVLSLSKLPTP*SKLGNV
Trigger: AACATTCCCAAGTTTGGATCAGGGAGTTGGAAGTTT...GGAGAGTGATAATACAAGTCCTTTAGTCTTACCCAGTGAATCATTCTGTTCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp CCAGAAACAATCACACCACAGCACATGACTGAAAACTCTATGAGAAATAGTGTGGTCCACTCTGAGTGGTaGAAAACAAAAGATTCTAAC +
Preference number: 2 (lower is better)
Translates to: PETITPQHMTENSMRNSVVHSEW*KTKDSN
Trigger: GTTAGAATCTTTTGTTTTTCACCACTCAGAGTGGAC...CACACTATTTCTCATAGAGTTTTCAGTCATGTGCTGTGGTGTGATTGTTTCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR-3UTR TCA 90 bp TATGGAACACAAAAGTCAAACAGATTTCCTCAGCCTCACAAGGTTCCAATTTTCCTCCATTACAATCCTTaGCTCTTAGGAACTAAACCC +
Preference number: 2 (lower is better)
Translates to: YGTQKSNRFPQPHKVPIFLHYNP*LLGTKP
Trigger: GGGTTTAGTTCCTAAGAGTCAAGGATTGTAATGGAG...GAAAATTGGAACCTTGTGAGGCTGAGGAAATCTGTTTGACTTTTGTGTTCCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR-3UTR TCA 90 bp AATCAAATGTTTTGCTGGATGTGGACTGCCTTGAGAAAGGAAAAACTGCTTGCTGAAACTTCAGTTACATaGGAGGGTAACACACTGAAA +
Preference number: 2 (lower is better)
Translates to: NQMFCWMWTALRKEKLLAETSVT*EGNTLK
Trigger: TTTCAGTGTGTTACCCTCTCATGTAACTGAAGTTTC...AGCAAGCAGTTTTTCCTTTCTCAAGGCAGTCCACATCCAGCAAAACATTTGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR-3UTR TCA 90 bp CCAGAAACAATCACACCACAGCACATGACTGAAAACTCTATGAGAAATAGTGTGTTCCAAAGTGTCCTATaGGTGCATTTCCTGGTATAT +
Preference number: 2 (lower is better)
Translates to: PETITPQHMTENSMRNSVFQSVL*VHFLVY
Trigger: ATATACCAGGAAATGCACTCATAGGACACTTTGGAA...CACACTATTTCTCATAGAGTTTTCAGTCATGTGCTGTGGTGTGATTGTTTCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR-3UTR GCA 90 bp CCCACGGCAGATTTTCCAAAAGGTTTAGGTGCATGGATTTACTCAGTATCTACATTGCATCCAGTGAGATaGATATTTCATGATTGTCCA +
Preference number: 2 (lower is better)
Translates to: PTADFPKGLGAWIYSVSTLHPVR*IFHDCP
Trigger: TGGACAATCATGAAATATGCATCTCACTGGATGCAA...TGTAGATACTGAGTAAATCCATGCACCTAAACCTTTTGGAAAATCTGCCGTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR GCA 90 bp AATGCAATCCACTGTCACTCTTGCAAATTCTACCTTGGAGGGAAAAACTTAATGCTTCCCCAAAAGAAATaGAATCCACTGTCACTCTTG +
Preference number: 2 (lower is better)
Translates to: NAIHCHSCKFYLGGKNLMLPQKK*NPLSLL
Trigger: CAAGAGTGACAGTGGATTGCATTTCTTTTGGGGAAG...CATTAAGTTTTTCCCTCCAAGGTAGAATTTGCAAGAGTGACAGTGGATTGCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CCA 90 bp TTTCCAAAAGGTTTAGGTGCATGGATTTACTCAGTATCTACACTACAGTCTTATACACGAAGCGGTGCTTaGCAATTAGTGGTCGGATTT +
Preference number: 2 (lower is better)
Translates to: FPKGLGAWIYSVSTLQSYTRSGA*QLVVGF
Trigger: AAATCCGACCACTAATTGCCAAGCACCGCTTCGTGT...ATAAGACTGTAGTGTAGATACTGAGTAAATCCATGCACCTAAACCTTTTGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp AGATGCATATTTCATGATTGTCCAAGGTCATGGTTGTCCAAAGACATGGAACAGCACAGCATTAAACATTaGACAGAGTACATTCCAAAG +
Preference number: 2 (lower is better)
Translates to: RCIFHDCPRSWLSKDMEQHSIKH*TEYIPK
Trigger: CTTTGGAATGTACTCTGTTCAATGTTTAATGCTGTG...CTGTTCCATGTCTTTGGACAACCATGACCTTGGACAATCATGAAATATGCATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp ATACCCATTAGACATATCCAGCTTGAAATTTATACCATTGCACTGCCAAACGGAGAGATGCATATTTCATaGTTGTCCAAGGTCATGGTT +
Preference number: 2 (lower is better)
Translates to: IPIRHIQLEIYTIALPNGEMHIS*LSKVMV
Trigger: AACCATGACCTTGGACAATCATGAAATATGCATCTC...TCCGTTTGGCAGTGCAATGGTATAAATTTCAAGCTGGATATGTCTAATGGGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR TCA 90 bp CTGTCACTCTTGCAAATTCTACCTTGGAGGGAAAAACTTAATGAAATGAGCTATCATTCATGCTCCATCTaGTTTTCTTTGCATCCAGTG +
Preference number: 2 (lower is better)
Translates to: LSLLQILPWREKLNEMSYHSCSI*FSLHPV
Trigger: CACTGGATGCAAAGAAAATCAGATGGAGCATGAATG...ATAGCTCATTTCATTAAGTTTTTCCCTCCAAGGTAGAATTTGCAAGAGTGACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CCA 90 bp TTTCCAAAAGGTTTAGGTGCATGGATTTACTCAGTATCTACACTACAGTCTTATGTAACCACATTTGTCTaGGCTGCAAAAGACACCACA +
Preference number: 2 (lower is better)
Translates to: FPKGLGAWIYSVSTLQSYVTTFV*AAKDTT
Trigger: TGTGGTGTCTTTTGCAGCCCAGACAAATGTGGTTAC...ATAAGACTGTAGTGTAGATACTGAGTAAATCCATGCACCTAAACCTTTTGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CCA 90 bp CTGTCACTCTTGCAAATTCTACCTTGGAGGGAAAAACTTAATGAAATGAGCTATTTGAAGTTATTTTTCTaGGGCAGTCCAGATGAACCG +
Preference number: 2 (lower is better)
Translates to: LSLLQILPWREKLNEMSYLKLFF*GSPDEP
Trigger: CGGTTCATCTGGACTGCCCCAGAAAAATAACTTCAA...ATAGCTCATTTCATTAAGTTTTTCCCTCCAAGGTAGAATTTGCAAGAGTGACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CCA 90 bp CCCACGGCAGATTTTCCAAAAGGTTTAGGTGCATGGATTTACTCAGTATCTACAAAAGGTTTAGGTGCATaGATTTACTCAGTATCTACA +
Preference number: 2 (lower is better)
Translates to: PTADFPKGLGAWIYSVSTKGLGA*IYSVST
Trigger: TGTAGATACTGAGTAAATCCATGCACCTAAACCTTT...TGTAGATACTGAGTAAATCCATGCACCTAAACCTTTTGGAAAATCTGCCGTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CCA 90 bp AATGATTTTGGCAGGATAGCAGCACAGGATTGGATATTCCATATTCATCACTTTACCACCACATCCTACTaGATTACAAACGCTAGATCT +
Preference number: 2 (lower is better)
Translates to: NDFGRIAAQDWIFHIHHFTTTSY*ITNARS
Trigger: AGATCTAGCGTTTGTAATCCAGTAGGATGTGGTGGT...AAAGTGATGAATATGGAATATCCAATCCTGTGCTGCTATCCTGCCAAAATCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678349.1
3UTR CAA 90 bp TATTTAAGACTAGATCATCTTCAAGCTATTTTTAATCCTATCGTCTaGCTGCCAAAATTGGCCATAAGCAGCCAATCCTCAGACACTAGA +
Preference number: 2 (lower is better)
Translates to: YLRLDHLQAIFNPIV*LPKLAISSQSSDTR
Trigger: TCTAGTGTCTGAGGATTGGCTGCTTATGGCCAATTTTGGCAGCAAGACGATAGGATTAAAAATAGCTTGAAGATGATCTAGTCTTAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR-3UTR TCA 90 bp TTTCCAAAAGGTTTAGGTGCATGGATTTACTCAGTATCTACACTACAGTCTTATGTCTCAGAATTTTCTTaGTTGAGCGAGCCTTTCCAT +
Preference number: 2 (lower is better)
Translates to: FPKGLGAWIYSVSTLQSYVSEFS*LSEPFH
Trigger: ATGGAAAGGCTCGCTCAATCAAGAAAATTCTGAGAC...ATAAGACTGTAGTGTAGATACTGAGTAAATCCATGCACCTAAACCTTTTGGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR GCA 90 bp ATACCCATTAGACATATCCAGCTTGAAATTTATACCATTGCACTGCCAAACGGATCCAAAAGGTTTAGGTaGATGGATTTACTCAGTATC +
Preference number: 2 (lower is better)
Translates to: IPIRHIQLEIYTIALPNGSKRFR*MDLLSI
Trigger: GATACTGAGTAAATCCATGCACCTAAACCTTTTGGA...TCCGTTTGGCAGTGCAATGGTATAAATTTCAAGCTGGATATGTCTAATGGGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR GCA 90 bp TTTCCAAAAGGTTTAGGTGCATGGATTTACTCAGTATCTACACTACAGTCTTATCTTCCCCAAAAGAAATaGAATCCACTGTCACTCTTG +
Preference number: 2 (lower is better)
Translates to: FPKGLGAWIYSVSTLQSYLPQKK*NPLSLL
Trigger: CAAGAGTGACAGTGGATTGCATTTCTTTTGGGGAAG...ATAAGACTGTAGTGTAGATACTGAGTAAATCCATGCACCTAAACCTTTTGGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CCA 90 bp TTTCCAAAAGGTTTAGGTGCATGGATTTACTCAGTATCTACACTACAGTCTTATGGTTGTCCAAAGACATaGAACAGAATGATTCACTGG +
Preference number: 2 (lower is better)
Translates to: FPKGLGAWIYSVSTLQSYGCPKT*NRMIHW
Trigger: CCAGTGAATCATTCTGTTCCATGTCTTTGGACAACC...ATAAGACTGTAGTGTAGATACTGAGTAAATCCATGCACCTAAACCTTTTGGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CCA 90 bp GTTATGGAACACAAAAGTCAAACAGATTTCCTCAGCCTCACAAGGTTCCAATTTTTGCAGTCTAAAGCCTaGAGTATTCAGTGTAGTATT +
Preference number: 2 (lower is better)
Translates to: VMEHKSQTDFLSLTRFQFLQSKA*SIQCSI
Trigger: AATACTACACTGAATACTCCAGGCTTTAGACTGCAA...AAATTGGAACCTTGTGAGGCTGAGGAAATCTGTTTGACTTTTGTGTTCCATAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR-3UTR GCA 90 bp TTTCCAAAAGGTTTAGGTGCATGGATTTACTCAGTATCTACACTACAGTCTTATAAAGAGCAGTTAAGATaGAGATGTGAATCCCTCTTC +
Preference number: 2 (lower is better)
Translates to: FPKGLGAWIYSVSTLQSYKEQLR*RCESLF
Trigger: GAAGAGGGATTCACATCTGCATCTTAACTGCTCTTT...ATAAGACTGTAGTGTAGATACTGAGTAAATCCATGCACCTAAACCTTTTGGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR GCA 90 bp CTGTCACTCTTGCAAATTCTACCTTGGAGGGAAAAACTTAATGAAATGAGCTATTCTAAAAACAGCCACTaGCTTAAAAGTACAGTTGGA +
Preference number: 2 (lower is better)
Translates to: LSLLQILPWREKLNEMSYSKNSH*LKSTVG
Trigger: TCCAACTGTACTTTTAAGGCAGTGGCTGTTTTTAGA...ATAGCTCATTTCATTAAGTTTTTCCCTCCAAGGTAGAATTTGCAAGAGTGACAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CAA 90 bp GCCACACAGCCAACGTGCCATGTGCTACAGCCAAAATGGGCCGTGGCCATTGCCGACCACACTGCCCTGTaGATCATCCCTGGAGGAGGC +
Preference number: 3 (lower is better)
Translates to: ATQPTCHVLQPKWAVAIADHTAL*IIPGGG
Trigger: GCCTCCTCCAGGGATGATCAACAGGGCAGTGTGGTC...GGCAATGGCCACGGCCCATTTTGGCTGTAGCACATGGCACGTTGGCTGTGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CAA 90 bp CCCGCCGGGGAGGTCTGGCTTCATACCACAGGTTTCCTGCTTTCTTGGTGGAGCGACCACACTGCCCTGTaGATCATCCCTGGAGGAGGC +
Preference number: 3 (lower is better)
Translates to: PAGEVWLHTTGFLLSWWSDHTAL*IIPGGG
Trigger: GCCTCCTCCAGGGATGATCAACAGGGCAGTGTGGTC...GCTCCACCAAGAAAGCAGGAAACCTGTGGTATGAAGCCAGACCTCCCCGGCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR GCA 72 bp ACAGGTGGGCCAAGGCCACACAGCCAACGTGCCATGTaGTACAGCCAAAATGGGCCGTGGCCATTGCCTCTC +
Preference number: 3 (lower is better)
Translates to: TGGPRPHSQRAM*YSQNGPWPLPL
Trigger: GAGAGGCAATGGCCACGGCCCATTTTGGCTGTAGCACATGGCACGTTGGCTGTGTGGCCTTGGCCCACCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR CCA 72 bp GCCACACAGCCAACGTGCCATGTGCTACAGCCAAAATaGGCCGTGGCCATTGCCTCTCCTCACGTTCCCAGC +
Preference number: 3 (lower is better)
Translates to: ATQPTCHVLQPK*AVAIASPHVPS
Trigger: GCTGGGAACGTGAGGAGAGGCAATGGCCACGGCCCATTTTGGCTGTAGCACATGGCACGTTGGCTGTGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR GCA 72 bp AGGACCAGGCCTCCAAGCTGGGACACAGGCAGGTTCTaGGGACTTCGGTCTCCTAAAAGCAGGCACTTGTGG +
Preference number: 3 (lower is better)
Translates to: RTRPPSWDTGRF*GLRSPKSRHLW
Trigger: CCACAAGTGCCTGCTTTTAGGAGACCGAAGTCCGCAGAACCTGCCTGTGTCCCAGCTTGGAGGCCTGGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR CCA 72 bp AGCCAACGTGCCATGTGCTACAGCCAAAATGGGCCGTaGCCATTGCCTCTCCTCACGTTCCCAGCCTTCACC +
Preference number: 3 (lower is better)
Translates to: SQRAMCYSQNGP*PLPLLTFPAFT
Trigger: GGTGAAGGCTGGGAACGTGAGGAGAGGCAATGGCCACGGCCCATTTTGGCTGTAGCACATGGCACGTTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CAA 90 bp CCCGCCGGGGAGGTCTGGCTTCATACCACAGGTTTCCTGCTTTCTTGGTGGAGCTTTGGGGCAGGCATGTaGACTTCACTTGTGGCCCAG +
Preference number: 3 (lower is better)
Translates to: PAGEVWLHTTGFLLSWWSFGAGM*TSLVAQ
Trigger: CTGGGCCACAAGTGAAGTCAACATGCCTGCCCCAAA...GCTCCACCAAGAAAGCAGGAAACCTGTGGTATGAAGCCAGACCTCCCCGGCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678134.1
ENST00000678349.1
3UTR GCA 72 bp GTGCCATGTGCTACAGCCAAAATGGGCCGTGGCCATTaGCTCTCCTCACGTTCCCAGCCTTCACCATGTCCT +
Preference number: 3 (lower is better)
Translates to: VPCATAKMGRGH*LSSRSQPSPCP
Trigger: AGGACATGGTGAAGGCTGGGAACGTGAGGAGAGGCAATGGCCACGGCCCATTTTGGCTGTAGCACATGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR GCA 72 bp TCAGCTGTCATTCTGGCCTCTCTTGCGGAGTATTTGTaGAGCGAGGGACTGGGAGGGCCGAGGAGGTTCTCA +
Preference number: 3 (lower is better)
Translates to: SAVILASLAEYL*SEGLGGPRRFS
Trigger: TGAGAACCTCCTCGGCCCTCCCAGTCCCTCGCTGCACAAATACTCCGCAAGAGAGGCCAGAATGACAGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR CCA 72 bp TGGCCTCTCTTGCGGAGTATTTGTGCAGCGAGGGACTaGGAGGGCCGAGGAGGTTCTCAGATGTTCTTCTCC +
Preference number: 3 (lower is better)
Translates to: WPLLRSICAARD*EGRGGSQMFFS
Trigger: GGAGAAGAACATCTGAGAACCTCCTCGGCCCTCCCAGTCCCTCGCTGCACAAATACTCCGCAAGAGAGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR CCA 72 bp CGACCCGATGGCCATAGACCCTGTCAGCTGTCATTCTaGCCTCTCTTGCGGAGTATTTGTGCAGCGAGGGAC +
Preference number: 3 (lower is better)
Translates to: RPDGHRPCQLSF*PLLRSICAARD
Trigger: GTCCCTCGCTGCACAAATACTCCGCAAGAGAGGCCAGAATGACAGCTGACAGGGTCTATGGCCATCGGGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR TCA 72 bp AGAGGAGGAGGTAGGGACGCCGGGAAGCAACAACTCTaGTTTTATTTCGCCGGCTCCACAGCCTCCCATTGC +
Preference number: 3 (lower is better)
Translates to: RGGGRDAGKQQL*FYFAGSTASHC
Trigger: GCAATGGGAGGCTGTGGAGCCGGCGAAATAAAATCAGAGTTGTTGCTTCCCGGCGTCCCTACCTCCTCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589955.2
ENST00000678349.1
3UTR TCA 72 bp CTTTTAGATGGCAGGCGTTATCGGTCAGGTTGGGAGTaGACGCTTTGTCCAGAGGAGGAGGTAGGGACGCCG +
Preference number: 3 (lower is better)
Translates to: LLDGRRYRSGWE*TLCPEEEVGTP
Trigger: CGGCGTCCCTACCTCCTCCTCTGGACAAAGCGTTCACTCCCAACCTGACCGATAACGCCTGCCATCTAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589955.2
ENST00000678349.1
3UTR CCA 72 bp CTCCGGTTCCAACAAGCTGCTCAAGCCAGGAAACGGTaGTCCTGGGGACTCCTGGACCTTCAGCTTGAGAAA +
Preference number: 3 (lower is better)
Translates to: LRFQQAAQARKR*SWGLLDLQLEK
Trigger: TTTCTCAAGCTGAAGGTCCAGGAGTCCCCAGGACCACCGTTTCCTGGCTTGAGCAGCTTGTTGGAACCGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589955.2
ENST00000678349.1
3UTR CCA 72 bp ACTCCTCAGGACACCTCATCACGCCCACTGGGAACATaGCACACACTGGAGATTCCAGTCCAAGGACTTTGG +
Preference number: 3 (lower is better)
Translates to: TPQDTSSRPLGT*HTLEIPVQGLW
Trigger: CCAAAGTCCTTGGACTGGAATCTCCAGTGTGTGCCATGTTCCCAGTGGGCGTGATGAGGTGTCCTGAGGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR-3UTR CAA 90 bp GGCCATAGACCCTGTCAGCTGTCATTCTGGCCTCTCTTGCGGAGTATTTGTGCATTTGGGGCAGGCATGTaGACTTCACTTGTGGCCCAG +
Preference number: 3 (lower is better)
Translates to: GHRPCQLSFWPLLRSICAFGAGM*TSLVAQ
Trigger: CTGGGCCACAAGTGAAGTCAACATGCCTGCCCCAAA...TGCACAAATACTCCGCAAGAGAGGCCAGAATGACAGCTGACAGGGTCTATGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678134.1
ENST00000678349.1
3UTR GCA 72 bp AGGCACAGAACATCCAGGTGGAGCCACACGAAGCGGTaGTTGGCAATTAGTGGTCGGATTTCCAAAGACAGG +
Preference number: 3 (lower is better)
Translates to: RHRTSRWSHTKR*LAISGRISKDR
Trigger: CCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR TCA 72 bp GAAACGGTGGTCCTGGGGACTCCTGGACCTTCAGCTTaGGAAACACTGAAGGGGTACCATTTACCACCACAT +
Preference number: 3 (lower is better)
Translates to: ETVVLGTPGPSA*ETLKGYHLPPH
Trigger: ATGTGGTGGTAAATGGTACCCCTTCAGTGTTTCTCAAGCTGAAGGTCCAGGAGTCCCCAGGACCACCGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589955.2
ENST00000678349.1
3UTR GCA 72 bp CACAGTTCCCAGTTTAGAGGGTCACTCTCCATCACCTaGCCAAAACTCAATCCCTTGCCTGCAAGAGTCCCT +
Preference number: 3 (lower is better)
Translates to: HSSQFRGSLSIT*PKLNPLPARVP
Trigger: AGGGACTCTTGCAGGCAAGGGATTGAGTTTTGGGCAGGTGATGGAGAGTGACCCTCTAAACTGGGAACTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR-3UTR CAA 90 bp GTCAGCTGTCATTCTGGCCTCTCTTGCGGAGTATTTGTGCAGCGAGGGACTGGGAAACAGCCTGCAGCTTaGTTTCATGGTACATCACTG +
Preference number: 3 (lower is better)
Translates to: VSCHSGLSCGVFVQRGTGKQPAA*FHGTSL
Trigger: CAGTGATGTACCATGAAACAAAGCTGCAGGCTGTTT...CCCAGTCCCTCGCTGCACAAATACTCCGCAAGAGAGGCCAGAATGACAGCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CAA 90 bp AAGGTTCTTCGCAGAGGCATCACATCGACCCCAATACAGGTCCTTCATACCCTTTCTCTTGCGGAGTATTaGTGCAGCGAGGGACTGGGA +
Preference number: 3 (lower is better)
Translates to: KVLRRGITSTPIQVLHTLSLAEY*CSEGLG
Trigger: TCCCAGTCCCTCGCTGCACAAATACTCCGCAAGAGA...AAGGGTATGAAGGACCTGTATTGGGGTCGATGTGATGCCTCTGCGAAGAACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CAA 90 bp TGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAATTGGGAGTGAACGCTTaGTCCAGAGGAGGAGGTAGG +
Preference number: 3 (lower is better)
Translates to: WKANLCLQAQNIQVEPHELGVNA*SRGGGR
Trigger: CCTACCTCCTCCTCTGGACAAAGCGTTCACTCCCAA...TTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678349.1
3UTR-3UTR CAA 90 bp TCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGGCGTTATCGGTCAGGTaGGGAGTGAACGCTTTGTCC +
Preference number: 3 (lower is better)
Translates to: SGQQHGKRIYVYRHRTSRALSVR*GVNALS
Trigger: GGACAAAGCGTTCACTCCCAACCTGACCGATAACGC...CCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678349.1
3UTR GCA 72 bp ATTCCAAATCTTAAGCCTGCCAGAGTTTTCTGCCCCTaGCAAATCTTCGGAGACGACCCGATGGCCATAGAC +
Preference number: 3 (lower is better)
Translates to: IPNLKPARVFCP*QIFGDDPMAID
Trigger: GTCTATGGCCATCGGGTCGTCTCCGAAGATTTGGCAGGGGCAGAAAACTCTGGCAGGCTTAAGATTTGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR GCA 72 bp GTACAACGGGCTTGTTTCAGGGGAGCTTGTTTGGGATaGAGACTGTCAAGACCCAACCTGGTATCTGGTTCA +
Preference number: 3 (lower is better)
Translates to: VQRACFRGACLG*RLSRPNLVSGS
Trigger: TGAACCAGATACCAGGTTGGGTCTTGACAGTCTGCATCCCAAACAAGCTCCCCTGAAACAAGCCCGTTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589955.2
ENST00000678349.1
3UTR CCA 72 bp ACAGAACATCCAGGTGGAGCCACACGAAGCGGTGCTTaGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTT +
Preference number: 3 (lower is better)
Translates to: TEHPGGATRSGA*QLVVGFPKTGV
Trigger: AACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR CCA 72 bp GTCTGGCTTCATACCACAGGTTTCCTGCTTTCTTGGTaGAGCGTAAGCACCACTGCATTTCAGGAAGACCCT +
Preference number: 3 (lower is better)
Translates to: VWLHTTGFLLSW*SVSTTAFQEDP
Trigger: AGGGTCTTCCTGAAATGCAGTGGTGCTTACGCTCCACCAAGAAAGCAGGAAACCTGTGGTATGAAGCCAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR CCA 72 bp GAGGTCTGGCTTCATACCACAGGTTTCCTGCTTTCTTaGTGGAGCGTAAGCACCACTGCATTTCAGGAAGAC +
Preference number: 3 (lower is better)
Translates to: EVWLHTTGFLLS*WSVSTTAFQED
Trigger: GTCTTCCTGAAATGCAGTGGTGCTTACGCTCCACCAAGAAAGCAGGAAACCTGTGGTATGAAGCCAGACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR CCA 72 bp GAGCTTGTTTGGGATGCAGACTGTCAAGACCCAACCTaGTATCTGGTTCATAAGCAGTCCCTGAAACCTCCC +
Preference number: 3 (lower is better)
Translates to: ELVWDADCQDPT*YLVHKQSLKPP
Trigger: GGGAGGTTTCAGGGACTGCTTATGAACCAGATACCAGGTTGGGTCTTGACAGTCTGCATCCCAAACAAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589955.2
ENST00000678349.1
3UTR CCA 72 bp ACACCTCATCACGCCCACTGGGAACATGGCACACACTaGAGATTCCAGTCCAAGGACTTTGGAATGTCAACT +
Preference number: 3 (lower is better)
Translates to: TPHHAHWEHGTH*RFQSKDFGMST
Trigger: AGTTGACATTCCAAAGTCCTTGGACTGGAATCTCCAGTGTGTGCCATGTTCCCAGTGGGCGTGATGAGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR CCA 72 bp CTAAAGCCTGGAGTATTCAGTGTAGTATTCAGGAGATaGGCTAATCCACGGAGCCCTGGGGACAGTGCAGAT +
Preference number: 3 (lower is better)
Translates to: LKPGVFSVVFRR*ANPRSPGDSAD
Trigger: ATCTGCACTGTCCCCAGGGCTCCGTGGATTAGCCCATCTCCTGAATACTACACTGAATACTCCAGGCTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR GCA 72 bp GGTCACTCTCCATCACCTGCCCAAAACTCAATCCCTTaGCTGCAAGAGTCCCTTTGTCTTAAAGAAGCTGCA +
Preference number: 3 (lower is better)
Translates to: GHSPSPAQNSIP*LQESLCLKEAA
Trigger: TGCAGCTTCTTTAAGACAAAGGGACTCTTGCAGGCAAGGGATTGAGTTTTGGGCAGGTGATGGAGAGTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR CCA 72 bp AAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTaGAGCCACACGAAGCGGTGCTTGGCAATTAGTGGT +
Preference number: 3 (lower is better)
Translates to: KRIYVYRHRTSR*SHTKRCLAISG
Trigger: ACCACTAATTGCCAAGCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CAA 90 bp TCTTCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCCACACGAAGCGGTGCTaGGCAATTAGTGGTCGGATT +
Preference number: 3 (lower is better)
Translates to: SSDGDPANNMESESMFTGHTKRC*AISGRI
Trigger: AATCCGACCACTAATTGCCAAGCACCGCTTCGTGTG...GCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CAA 90 bp GGGCCCACGGCAGATTTTCCAAAAGGTTTAGGTGCATGGATTTACTCAGTATCTTCATTCTGGCCTCTCTaGCGGAGTATTTGTGCAGCG +
Preference number: 3 (lower is better)
Translates to: GPTADFPKGLGAWIYSVSSFWPL*RSICAA
Trigger: CGCTGCACAAATACTCCGCAAGAGAGGCCAGAATGA...AGATACTGAGTAAATCCATGCACCTAAACCTTTTGGAAAATCTGCCGTGGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CAA 90 bp CCTCCCACCAGGTATGCATCATGTGAGTCATATGCAAAGAGTCTCTTCTTCAGGTCCTGGACCTTCAGCTaGAGAAACACTGAAGGGGTA +
Preference number: 3 (lower is better)
Translates to: PPTRYASCESYAKSLFFRSWTFS*RNTEGV
Trigger: TACCCCTTCAGTGTTTCTCAAGCTGAAGGTCCAGGA...CCTGAAGAAGAGACTCTTTGCATATGACTCACATGATGCATACCTGGTGGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678349.1
3UTR-3UTR CAA 90 bp CACAGTTCCCAGTTTAGAGGGTCACTCTCCATCACCTGCCCAAAACTCAATCCCCATGTGGTGTGCTTCTaGACATCTAATCCACTTGCA +
Preference number: 3 (lower is better)
Translates to: HSSQFRGSLSITCPKLNPHVVCF*TSNPLA
Trigger: TGCAAGTGGATTAGATGTCAAGAAGCACACCACATG...GGGATTGAGTTTTGGGCAGGTGATGGAGAGTGACCCTCTAAACTGGGAACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR TCA 72 bp TCCCAACTCTTTTCCTCCCACCAGGTATGCATCATGTaGGTCATATGCAAAGAGTCTCTTCTTCAGGCCAGG +
Preference number: 3 (lower is better)
Translates to: SQLFSSHQVCIM*VICKESLLQAR
Trigger: CCTGGCCTGAAGAAGAGACTCTTTGCATATGACTCACATGATGCATACCTGGTGGGAGGAAAAGAGTTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR TCA 72 bp TTGCACTGCCAAACGGAGCTGCACTTTGAGCCATGCTaGTGTCTCTGGAATCTAAAGGTCGTACCACAAACT +
Preference number: 3 (lower is better)
Translates to: LHCQTELHFEPC*CLWNLKVVPQT
Trigger: AGTTTGTGGTACGACCTTTAGATTCCAGAGACATCAGCATGGCTCAAAGTGCAGCTCCGTTTGGCAGTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR GCA 72 bp ACTCTCCATCACCTGCCCAAAACTCAATCCCTTGCCTaGAAGAGTCCCTTTGTCTTAAAGAAGCTGCAAGGT +
Preference number: 3 (lower is better)
Translates to: TLHHLPKTQSLA*KSPFVLKKLQG
Trigger: ACCTTGCAGCTTCTTTAAGACAAAGGGACTCTTGCAGGCAAGGGATTGAGTTTTGGGCAGGTGATGGAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR CCA 72 bp CCGTCTGCTCTTCAGATGGTGATCCGGCCAACAACATaGAAAGCGAATCTATGTTTACAGGCACAGAACATC +
Preference number: 3 (lower is better)
Translates to: PSALQMVIRPTT*KANLCLQAQNI
Trigger: GATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGAAGAGCAGACGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR CCA 72 bp TCTCCACGACTAGCAAGCAAGTTAAAGACTTTTAGATaGCAGGCGTTATCGGTCAGGTTGGGAGTGAACGCT +
Preference number: 3 (lower is better)
Translates to: SPRLASKLKTFR*QALSVRLGVNA
Trigger: AGCGTTCACTCCCAACCTGACCGATAACGCCTGCCATCTAAAAGTCTTTAACTTGCTTGCTAGTCGTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589955.2
ENST00000678349.1
3UTR-3UTR CAA 90 bp GGAACATGGCACACACTGGAGATTCCAGTCCAAGGACTTTGGAATGTCAACTTATCCTGGACCTTCAGCTaGAGAAACACTGAAGGGGTA +
Preference number: 3 (lower is better)
Translates to: GTWHTLEIPVQGLWNVNLSWTFS*RNTEGV
Trigger: TACCCCTTCAGTGTTTCTCAAGCTGAAGGTCCAGGA...TAAGTTGACATTCCAAAGTCCTTGGACTGGAATCTCCAGTGTGTGCCATGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR-3UTR CAA 90 bp TTCCTGATGCGGAAGTCACCGAAATGTTCACTTCCTCAAGTTCCAGAGGATTCTTTCAGGGGAGCTTGTTaGGGATGCAGACTGTCAAGA +
Preference number: 3 (lower is better)
Translates to: FLMRKSPKCSLPQVPEDSFRGAC*GCRLSR
Trigger: TCTTGACAGTCTGCATCCCAAACAAGCTCCCCTGAA...AGAATCCTCTGGAACTTGAGGAAGTGAACATTTCGGTGACTTCCGCATCAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678349.1
3UTR-3UTR CAA 90 bp CACAGTTCCCAGTTTAGAGGGTCACTCTCCATCACCTGCCCAAAACTCAATCCCAACCTCAGATACCTGTaGACCACAAAGATAGGTCTA +
Preference number: 3 (lower is better)
Translates to: HSSQFRGSLSITCPKLNPNLRYL*TTKIGL
Trigger: TAGACCTATCTTTGTGGTCAACAGGTATCTGAGGTT...GGGATTGAGTTTTGGGCAGGTGATGGAGAGTGACCCTCTAAACTGGGAACTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR-3UTR CAA 90 bp GGTGCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGATGGGACTGGAACCTTTTGCATATTaGTTTGGGGCAGGCATGTTG +
Preference number: 3 (lower is better)
Translates to: GAWQLVVGFPKTGVLMGLEPFAY*FGAGML
Trigger: CAACATGCCTGCCCCAAACAAATATGCAAAAGGTTC...CAGTCCCATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CAA 90 bp CGAAGCGGTGCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGATGGAACCTTTTGCATATTaGTTTGGGGCAGGCATGTTG +
Preference number: 3 (lower is better)
Translates to: RSGAWQLVVGFPKTGVLMEPFAY*FGAGML
Trigger: CAACATGCCTGCCCCAAACAAATATGCAAAAGGTTC...CATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACCGCTTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CAA 90 bp ATGCATCATGTGAGTCATATGCAAAGAGTCTCTTCTTCAGGCCAGGGAGGCATGGAACCTTTTGCATATTaGTTTGGGGCAGGCATGTTG +
Preference number: 3 (lower is better)
Translates to: MHHVSHMQRVSSSGQGGMEPFAY*FGAGML
Trigger: CAACATGCCTGCCCCAAACAAATATGCAAAAGGTTC...CATGCCTCCCTGGCCTGAAGAAGAGACTCTTTGCATATGACTCACATGATGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CAA 90 bp AGCGGTGCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGATGGGAAAACAGCCTGCAGCTTaGTTTCATGGTACATCACTG +
Preference number: 3 (lower is better)
Translates to: SGAWQLVVGFPKTGVLMGKQPAA*FHGTSL
Trigger: CAGTGATGTACCATGAAACAAAGCTGCAGGCTGTTT...TCCCATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACCGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CAA 90 bp CCACCAGTGTTCCCATCTTCTGTGCTCAGCTTGGTATGCAGAACAACCTTGTTGAGTCTCAGAATTTTCTaGATTGAGCGAGCCTTTCCA +
Preference number: 3 (lower is better)
Translates to: PPVFPSSVLSLVCRTTLLSLRIF*IERAFP
Trigger: TGGAAAGGCTCGCTCAATCAAGAAAATTCTGAGACT...CAACAAGGTTGTTCTGCATACCAAGCTGAGCACAGAAGATGGGAACACTGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CAA 90 bp GGAACATGGCACACACTGGAGATTCCAGTCCAAGGACTTTGGAATGTCAACTTACGATTGATGATGCCCTaGGTCTTCTGTGGAGTCTAT +
Preference number: 3 (lower is better)
Translates to: GTWHTLEIPVQGLWNVNLRLMMP*VFCGVY
Trigger: ATAGACTCCACAGAAGACCAAGGGCATCATCAATCG...TAAGTTGACATTCCAAAGTCCTTGGACTGGAATCTCCAGTGTGTGCCATGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR-3UTR CAA 90 bp CACAGTTCCCAGTTTAGAGGGTCACTCTCCATCACCTGCCCAAAACTCAATCCCAGAAAAAGAAATGACTaGCAGTCTAAAGCCTGGAGT +
Preference number: 3 (lower is better)
Translates to: HSSQFRGSLSITCPKLNPRKRND*QSKAWS
Trigger: ACTCCAGGCTTTAGACTGCAAGTCATTTCTTTTTCT...GGGATTGAGTTTTGGGCAGGTGATGGAGAGTGACCCTCTAAACTGGGAACTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR TCA 72 bp TCAGGTCCTTTTTCCATCCGTCTGCTCTTCAGATGGTaGTCCGGCCAACAACATGGAAAGCGAATCTATGTT +
Preference number: 3 (lower is better)
Translates to: SGPFSIRLLFRW*SGQQHGKRIYV
Trigger: AACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGAAGAGCAGACGGATGGAAAAAGGACCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR TCA 72 bp CCGGGGGATGCATGTGCTACTGTCTATAAGCCACACTaGGCAGCAAGGTATCCACATTTTCTAGAATTGCTT +
Preference number: 3 (lower is better)
Translates to: PGDACATVYKPH*AARYPHFLELL
Trigger: AAGCAATTCTAGAAAATGTGGATACCTTGCTGCTCAGTGTGGCTTATAGACAGTAGCACATGCATCCCCCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR-3UTR CAA 90 bp GATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAAGAACCTTTTGCATATTaGTTTGGGGCAGGCATGTTG +
Preference number: 3 (lower is better)
Translates to: DGDPANNMESESMFTGTEEPFAY*FGAGML
Trigger: CAACATGCCTGCCCCAAACAAATATGCAAAAGGTTC...TTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CAA 90 bp GGGCCCACGGCAGATTTTCCAAAAGGTTTAGGTGCATGGATTTACTCAGTATCTAAACAGCCTGCAGCTTaGTTTCATGGTACATCACTG +
Preference number: 3 (lower is better)
Translates to: GPTADFPKGLGAWIYSVSKQPAA*FHGTSL
Trigger: CAGTGATGTACCATGAAACAAAGCTGCAGGCTGTTT...AGATACTGAGTAAATCCATGCACCTAAACCTTTTGGAAAATCTGCCGTGGGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CAA 90 bp CTGATGCGGAAGTCACCGAAATGTTCACTTCCTCAAGTTCCAGAGGATTCTGTTAAACAGCCTGCAGCTTaGTTTCATGGTACATCACTG +
Preference number: 3 (lower is better)
Translates to: LMRKSPKCSLPQVPEDSVKQPAA*FHGTSL
Trigger: CAGTGATGTACCATGAAACAAAGCTGCAGGCTGTTT...AACAGAATCCTCTGGAACTTGAGGAAGTGAACATTTCGGTGACTTCCGCATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CAA 90 bp GATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAAAACAGCCTGCAGCTTaGTTTCATGGTACATCACTG +
Preference number: 3 (lower is better)
Translates to: DPANNMESESMFTGTEHPKQPAA*FHGTSL
Trigger: CAGTGATGTACCATGAAACAAAGCTGCAGGCTGTTT...TGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CAA 90 bp TTGCCCAGGGACGAGGAAACCTTCAAGAAACAAGGTCAAAGGGACAACAGATATAAACAGCCTGCAGCTTaGTTTCATGGTACATCACTG +
Preference number: 3 (lower is better)
Translates to: LPRDEETFKKQGQRDNRYKQPAA*FHGTSL
Trigger: CAGTGATGTACCATGAAACAAAGCTGCAGGCTGTTT...ATATCTGTTGTCCCTTTGACCTTGTTTCTTGAAGGTTTCCTCGTCCCTGGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CAA 90 bp CCACCAGTGTTCCCATCTTCTGTGCTCAGCTTGGTATGCAGAACAACCTTGTTGCAAAATGTTTCTCATTaGTCACACAAGGTTCTTCGC +
Preference number: 3 (lower is better)
Translates to: PPVFPSSVLSLVCRTTLLQNVSH*SHKVLR
Trigger: GCGAAGAACCTTGTGTGACAAATGAGAAACATTTTG...CAACAAGGTTGTTCTGCATACCAAGCTGAGCACAGAAGATGGGAACACTGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CAA 90 bp TATGGAACACAAAAGTCAAACAGATTTCCTCAGCCTCACAAGGTTCCAATTTTCTTGGGAGTGAACGCTTaGTCCAGAGGAGGAGGTAGG +
Preference number: 3 (lower is better)
Translates to: YGTQKSNRFPQPHKVPIFLGVNA*SRGGGR
Trigger: CCTACCTCCTCCTCTGGACAAAGCGTTCACTCCCAA...GAAAATTGGAACCTTGTGAGGCTGAGGAAATCTGTTTGACTTTTGTGTTCCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR-3UTR CAA 90 bp TATGGAACACAAAAGTCAAACAGATTTCCTCAGCCTCACAAGGTTCCAATTTTCGCGTTATCGGTCAGGTaGGGAGTGAACGCTTTGTCC +
Preference number: 3 (lower is better)
Translates to: YGTQKSNRFPQPHKVPIFALSVR*GVNALS
Trigger: GGACAAAGCGTTCACTCCCAACCTGACCGATAACGC...GAAAATTGGAACCTTGTGAGGCTGAGGAAATCTGTTTGACTTTTGTGTTCCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR-3UTR CAA 90 bp CACAATGCCTTATTCAGACCTAGGAATAAATCCACACTCCACTCTACAGCCAATTTGTTTCAGGGGAGCTaGTTTGGGATGCAGACTGTC +
Preference number: 3 (lower is better)
Translates to: HNALFRPRNKSTLHSTANLFQGS*FGMQTV
Trigger: GACAGTCTGCATCCCAAACAAGCTCCCCTGAAACAA...ATTGGCTGTAGAGTGGAGTGTGGATTTATTCCTAGGTCTGAATAAGGCATTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR-3UTR CAA 90 bp TCCATGACACCTCACTTCAATGCTTCTTTTAGGATTTGTGACCCTCTCCAAAGTTTGTTTCAGGGGAGCTaGTTTGGGATGCAGACTGTC +
Preference number: 3 (lower is better)
Translates to: SMTPHFNASFRICDPLQSLFQGS*FGMQTV
Trigger: GACAGTCTGCATCCCAAACAAGCTCCCCTGAAACAA...ACTTTGGAGAGGGTCACAAATCCTAAAAGAAGCATTGAAGTGAGGTGTCATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678349.1
3UTR-3UTR CAA 90 bp TTCATTGTTACTTCTAAAGCAGCTTGGAGGATCTTACCACGTGGAGCATACTGCCGATTGATGATGCCCTaGGTCTTCTGTGGAGTCTAT +
Preference number: 3 (lower is better)
Translates to: FIVTSKAAWRILPRGAYCRLMMP*VFCGVY
Trigger: ATAGACTCCACAGAAGACCAAGGGCATCATCAATCG...GCAGTATGCTCCACGTGGTAAGATCCTCCAAGCTGCTTTAGAAGTAACAATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678349.1
3UTR-3UTR CAA 90 bp ATGCATCATGTGAGTCATATGCAAAGAGTCTCTTCTTCAGGCCAGGGAGGCATGGGAAAATTTTACCGATaGATGATGCCCTTGGTCTTC +
Preference number: 3 (lower is better)
Translates to: MHHVSHMQRVSSSGQGGMGKFYR*MMPLVF
Trigger: GAAGACCAAGGGCATCATCAATCGGTAAAATTTTCC...CATGCCTCCCTGGCCTGAAGAAGAGACTCTTTGCATATGACTCACATGATGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678349.1
3UTR GCA 72 bp CCACCAGTGTTCCCATCTTCTGTGCTCAGCTTGGTATaGAGAACAACCTTGTTGTTGATAGGATGTTTGCTT +
Preference number: 3 (lower is better)
Translates to: PPVFPSSVLSLV*RTTLLLIGCLL
Trigger: AAGCAAACATCCTATCAACAACAAGGTTGTTCTGCATACCAAGCTGAGCACAGAAGATGGGAACACTGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR CCA 72 bp AACACTGAAGGGGTACCATTTACCACCACATCCTACTaGATTACAAACGCTAGATCTTTGGATCTCCACGAC +
Preference number: 3 (lower is better)
Translates to: NTEGVPFTTTSY*ITNARSLDLHD
Trigger: GTCGTGGAGATCCAAAGATCTAGCGTTTGTAATCCAGTAGGATGTGGTGGTAAATGGTACCCCTTCAGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589955.2
ENST00000678349.1
3UTR-3UTR CAA 90 bp TCTAAAGCAGCTTGGAGGATCTTACCACGTGGAGCATACTGCAAACTGACTCCAGAATCTGCTGGTCATTaGCCATCTGGATTTTTAACT +
Preference number: 3 (lower is better)
Translates to: SKAAWRILPRGAYCKLTPESAGH*PSGFLT
Trigger: AGTTAAAAATCCAGATGGCAAATGACCAGCAGATTC...TGGAGTCAGTTTGCAGTATGCTCCACGTGGTAAGATCCTCCAAGCTGCTTTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CAA 90 bp AATCAAATGTTTTGCTGGATGTGGACTGCCTTGAGAAAGGAAAAACTGCTTGCTTTCAGGGGAGCTTGTTaGGGATGCAGACTGTCAAGA +
Preference number: 3 (lower is better)
Translates to: NQMFCWMWTALRKEKLLAFRGAC*GCRLSR
Trigger: TCTTGACAGTCTGCATCCCAAACAAGCTCCCCTGAA...AGCAAGCAGTTTTTCCTTTCTCAAGGCAGTCCACATCCAGCAAAACATTTGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR GCA 72 bp TGGAGGGCCCACGGCAGATTTTCCAAAAGGTTTAGGTaGATGGATTTACTCAGTATCTACACTACAGTCTTA +
Preference number: 3 (lower is better)
Translates to: WRAHGRFSKRFR*MDLLSIYTTVL
Trigger: TAAGACTGTAGTGTAGATACTGAGTAAATCCATGCACCTAAACCTTTTGGAAAATCTGCCGTGGGCCCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CAA 90 bp GCAACATCAACTACTCTTAGAGCAAGTGCAGCCACAATACTGTACAGTTCTGGGGAATCTGCTGGTCATTaGCCATCTGGATTTTTAACT +
Preference number: 3 (lower is better)
Translates to: ATSTTLRASAATILYSSGESAGH*PSGFLT
Trigger: AGTTAAAAATCCAGATGGCAAATGACCAGCAGATTC...CCCAGAACTGTACAGTATTGTGGCTGCACTTGCTCTAAGAGTAGTTGATGTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CAA 90 bp TTCATTGTTACTTCTAAAGCAGCTTGGAGGATCTTACCACGTGGAGCATACTGCCAAACCACCATAGATTaGAATCTGCTGGTCATTTGC +
Preference number: 3 (lower is better)
Translates to: FIVTSKAAWRILPRGAYCQTTID*NLLVIC
Trigger: GCAAATGACCAGCAGATTCAAATCTATGGTGGTTTG...GCAGTATGCTCCACGTGGTAAGATCCTCCAAGCTGCTTTAGAAGTAACAATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CAA 90 bp GGGCCCACGGCAGATTTTCCAAAAGGTTTAGGTGCATGGATTTACTCAGTATCTTGCAGAACAACCTTGTaGTTGATAGGATGTTTGCTT +
Preference number: 3 (lower is better)
Translates to: GPTADFPKGLGAWIYSVSCRTTL*LIGCLL
Trigger: AAGCAAACATCCTATCAACAACAAGGTTGTTCTGCA...AGATACTGAGTAAATCCATGCACCTAAACCTTTTGGAAAATCTGCCGTGGGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CAA 90 bp TCGACGTTTTGCCTGAAGACTGTTAATTGTTGTGTGTGTGTGTGTCTGTCTGTGGGCACTCCGAGCTTCTaGGAGAACATTATGAATAAT +
Preference number: 3 (lower is better)
Translates to: STFCLKTVNCCVCVCLSVGTPSF*ENIMNN
Trigger: ATTATTCATAATGTTCTCCAAGAAGCTCGGAGTGCC...CACAGACAGACACACACACACACAACAATTAACAGTCTTCAGGCAAAACGTCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678134.1
3UTR TCA 72 bp TGTTTGCTTGAAGTTATTTTTCTGGGGCAGTCCAGATaGACCGGTACAGTACCATTCATGCTCCATCTGATT +
Preference number: 3 (lower is better)
Translates to: CLLEVIFLGQSR*TGTVPFMLHLI
Trigger: AATCAGATGGAGCATGAATGGTACTGTACCGGTTCATCTGGACTGCCCCAGAAAAATAACTTCAAGCAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR TCA 72 bp ATGCAGAACAACCTTGTTGTTGATAGGATGTTTGCTTaGAGTTATTTTTCTGGGGCAGTCCAGATGAACCGG +
Preference number: 3 (lower is better)
Translates to: MQNNLVVDRMFA*SYFSGAVQMNR
Trigger: CCGGTTCATCTGGACTGCCCCAGAAAAATAACTTCAAGCAAACATCCTATCAACAACAAGGTTGTTCTGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR CCA 72 bp ATAAACAATTCTGTTGACGTGGAAATGCACATGACTTaGTTGAAACAAAGCTCCTCAGTGGCCAGTGACATC +
Preference number: 3 (lower is better)
Translates to: INNSVDVEMHMT*LKQSSSVASDI
Trigger: GATGTCACTGGCCACTGAGGAGCTTTGTTTCAACCAAGTCATGTGCATTTCCACGTCAACAGAATTGTTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR CCA 72 bp CCACCACATCCTACTGGATTACAAACGCTAGATCTTTaGATCTCCACGACTAGCAAGCAAGTTAAAGACTTT +
Preference number: 3 (lower is better)
Translates to: PPHPTGLQTLDL*ISTTSKQVKDF
Trigger: AAAGTCTTTAACTTGCTTGCTAGTCGTGGAGATCCAAAGATCTAGCGTTTGTAATCCAGTAGGATGTGGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589955.2
ENST00000678349.1
3UTR-3UTR CAA 90 bp GTGAGATGCATATTTCATGATTGTCCAAGGTCATGGTTGTCCAAAGACATGGAAATGCACATGACTTGGTaGAAACAAAGCTCCTCAGTG +
Preference number: 3 (lower is better)
Translates to: VRCIFHDCPRSWLSKDMEMHMTW*KQSSSV
Trigger: CACTGAGGAGCTTTGTTTCAACCAAGTCATGTGCAT...TTCCATGTCTTTGGACAACCATGACCTTGGACAATCATGAAATATGCATCTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CAA 90 bp CTGTCACTCTTGCAAATTCTACCTTGGAGGGAAAAACTTAATGAAATGAGCTATGAATTAAATGCGGAATaGCCCAGGGACGAGGAAACC +
Preference number: 3 (lower is better)
Translates to: LSLLQILPWREKLNEMSYELNAE*PRDEET
Trigger: GGTTTCCTCGTCCCTGGGCAATTCCGCATTTAATTC...ATAGCTCATTTCATTAAGTTTTTCCCTCCAAGGTAGAATTTGCAAGAGTGACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CAA 90 bp TTCATTGTTACTTCTAAAGCAGCTTGGAGGATCTTACCACGTGGAGCATACTGCGATAGCAGCACAGGATaGGATATTCCATATTCATCA +
Preference number: 3 (lower is better)
Translates to: FIVTSKAAWRILPRGAYCDSSTG*DIPYSS
Trigger: TGATGAATATGGAATATCCAATCCTGTGCTGCTATC...GCAGTATGCTCCACGTGGTAAGATCCTCCAAGCTGCTTTAGAAGTAACAATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CAA 90 bp CCCACGGCAGATTTTCCAAAAGGTTTAGGTGCATGGATTTACTCAGTATCTACATTTATGTGTACAGTGTaGCAGAATATCAGCCACCTC +
Preference number: 3 (lower is better)
Translates to: PTADFPKGLGAWIYSVSTFMCTV*QNISHL
Trigger: GAGGTGGCTGATATTCTGCAACACTGTACACATAAA...TGTAGATACTGAGTAAATCCATGCACCTAAACCTTTTGGAAAATCTGCCGTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CAA 90 bp AATCAAATGTTTTGCTGGATGTGGACTGCCTTGAGAAAGGAAAAACTGCTTGCTTCCAGTCCAAGGACTTaGGAATGTCAACTTAGCTCT +
Preference number: 3 (lower is better)
Translates to: NQMFCWMWTALRKEKLLASSPRT*ECQLSS
Trigger: AGAGCTAAGTTGACATTCCAAAGTCCTTGGACTGGA...AGCAAGCAGTTTTTCCTTTCTCAAGGCAGTCCACATCCAGCAAAACATTTGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR TCA 72 bp CCAGATGAACCGGTACAGTACCATTCATGCTCCATCTaGTTTTCTTTGCATCCAGTGAGATGCATATTTCAT +
Preference number: 3 (lower is better)
Translates to: PDEPVQYHSCSI*FSLHPVRCIFH
Trigger: ATGAAATATGCATCTCACTGGATGCAAAGAAAATCAGATGGAGCATGAATGGTACTGTACCGGTTCATCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR CCA 72 bp TTCATGATTGTCCAAGGTCATGGTTGTCCAAAGACATaGAACAGAATGATTCACTGGGTAAGACTAAAGGAC +
Preference number: 3 (lower is better)
Translates to: FMIVQGHGCPKT*NRMIHWVRLKD
Trigger: GTCCTTTAGTCTTACCCAGTGAATCATTCTGTTCCATGTCTTTGGACAACCATGACCTTGGACAATCATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR CCA 72 bp CCAGTGAGATGCATATTTCATGATTGTCCAAGGTCATaGTTGTCCAAAGACATGGAACAGAATGATTCACTG +
Preference number: 3 (lower is better)
Translates to: PVRCIFHDCPRS*LSKDMEQNDSL
Trigger: CAGTGAATCATTCTGTTCCATGTCTTTGGACAACCATGACCTTGGACAATCATGAAATATGCATCTCACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CAA 90 bp GGGTGCGTATCCAAAATATATGAATATACACAATCAGGGCTTAAGGTACTGGATGAACCTTTTGCATATTaGTTTGGGGCAGGCATGTTG +
Preference number: 3 (lower is better)
Translates to: GCVSKIYEYTQSGLKVLDEPFAY*FGAGML
Trigger: CAACATGCCTGCCCCAAACAAATATGCAAAAGGTTC...ATCCAGTACCTTAAGCCCTGATTGTGTATATTCATATATTTTGGATACGCACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CAA 90 bp AATCAAATGTTTTGCTGGATGTGGACTGCCTTGAGAAAGGAAAAACTGCTTGCTGGAAAATTTTACCGATaGATGATGCCCTTGGTCTTC +
Preference number: 3 (lower is better)
Translates to: NQMFCWMWTALRKEKLLAGKFYR*MMPLVF
Trigger: GAAGACCAAGGGCATCATCAATCGGTAAAATTTTCC...AGCAAGCAGTTTTTCCTTTCTCAAGGCAGTCCACATCCAGCAAAACATTTGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR TCA 72 bp TATTTGCAATTCTGTTCACTCAATAGATCCTGGAGGTaGAAGCTAGACATGTGTTGGGATTGCCCTGATTAT +
Preference number: 3 (lower is better)
Translates to: YLQFCSLNRSWR*KLDMCWDCPDY
Trigger: ATAATCAGGGCAATCCCAACACATGTCTAGCTTTCACCTCCAGGATCTATTGAGTGAACAGAATTGCAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR TCA 72 bp CTGATTTTCTTTGCATCCAGTGAGATGCATATTTCATaGTTGTCCAAGGTCATGGTTGTCCAAAGACATGGA +
Preference number: 3 (lower is better)
Translates to: LIFFASSEMHIS*LSKVMVVQRHG
Trigger: TCCATGTCTTTGGACAACCATGACCTTGGACAATCATGAAATATGCATCTCACTGGATGCAAAGAAAATCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR TCA 72 bp ACCATTCATGCTCCATCTGATTTTCTTTGCATCCAGTaGGATGCATATTTCATGATTGTCCAAGGTCATGGT +
Preference number: 3 (lower is better)
Translates to: TIHAPSDFLCIQ*DAYFMIVQGHG
Trigger: ACCATGACCTTGGACAATCATGAAATATGCATCTCACTGGATGCAAAGAAAATCAGATGGAGCATGAATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR CCA 72 bp TATTGCTTTCCAGTTAATCAAATGTTTTGCTGGATGTaGACTGCCTTGAGAAAGGAAAAACTGCTTGCTGAC +
Preference number: 3 (lower is better)
Translates to: YCFPVNQMFCWM*TALRKEKLLAD
Trigger: GTCAGCAAGCAGTTTTTCCTTTCTCAAGGCAGTCCACATCCAGCAAAACATTTGATTAACTGGAAAGCAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR-3UTR CAA 90 bp AATGATTTTGGCAGGATAGCAGCACAGGATTGGATATTCCATATTCATCACTTTAGGGATGGTTCTCTGTaGCCCAACTGCAAAATAATT +
Preference number: 3 (lower is better)
Translates to: NDFGRIAAQDWIFHIHHFRDGSL*PNCKII
Trigger: AATTATTTTGCAGTTGGGCAACAGAGAACCATCCCT...AAAGTGATGAATATGGAATATCCAATCCTGTGCTGCTATCCTGCCAAAATCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR-3UTR CAA 90 bp AATCAAATGTTTTGCTGGATGTGGACTGCCTTGAGAAAGGAAAAACTGCTTGCTAAAGGAAGCACTGAATaGCATCCTGTTTTTCAAAGA +
Preference number: 3 (lower is better)
Translates to: NQMFCWMWTALRKEKLLAKGSTE*HPVFQR
Trigger: TCTTTGAAAAACAGGATGCAATTCAGTGCTTCCTTT...AGCAAGCAGTTTTTCCTTTCTCAAGGCAGTCCACATCCAGCAAAACATTTGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR TCA 72 bp TTAATTTGTAGTCTTCTGGGACAATCTATCAGAGGCTaGTCATTCCAAGGACCTGATTTATCCATGTTATGG +
Preference number: 3 (lower is better)
Translates to: LICSLLGQSIRG*SFQGPDLSMLW
Trigger: CCATAACATGGATAAATCAGGTCCTTGGAATGATCAGCCTCTGATAGATTGTCCCAGAAGACTACAAATTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR GCA 72 bp TCATGGTACATCACTGACAATGCATATTATTTCTACTaGTTTAGTGAACCTTTTGCATATTTGTTTGGGGCA +
Preference number: 3 (lower is better)
Translates to: SWYITDNAYYFY*FSEPFAYLFGA
Trigger: TGCCCCAAACAAATATGCAAAAGGTTCACTAAAGCAGTAGAAATAATATGCATTGTCAGTGATGTACCATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR TCA 72 bp ATTGTCACATGCCAAGAAAATATGCTAGCTCTCTTCTaGAGCTTTACCATTAAGACTACCTTACACTATAAA +
Preference number: 3 (lower is better)
Translates to: IVTCQENMLALF*SFTIKTTLHYK
Trigger: TTTATAGTGTAAGGTAGTCTTAATGGTAAAGCTTCAGAAGAGAGCTAGCATATTTTCTTGGCATGTGACAAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR TCA 90 bp CTCTCTTGCGGAGTATTTGTGCAGCGAGGGACTGGGAGGGCCGAGGAGGTTCTCAGCGTCCCCGCGCGGTaGAGGGCGTCAGGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: LSCGVFVQRGTGRAEEVLSVPAR*RASGAA
Trigger: AGCTGCACCTGACGCCCTTCACCGCGCGGGGACGCT...GAGAACCTCCTCGGCCCTCCCAGTCCCTCGCTGCACAAATACTCCGCAAGAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GCCACACAGCCAACGTGCCATGTGCTACAGCCAAAATGGGCCGTGGCCATTGCCGCTCCTCCACCACCGTaGCAAAGCGTCCCCGCGCGG +
Preference number: 4 (lower is better)
Translates to: ATQPTCHVLQPKWAVAIAAPPPP*QSVPAR
Trigger: CCGCGCGGGGACGCTTTGCCACGGTGGTGGAGGAGC...GGCAATGGCCACGGCCCATTTTGGCTGTAGCACATGGCACGTTGGCTGTGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR GCA 90 bp AATGGGCCGTGGCCATTGCCTCTCCTCACGTTCCCAGCCTTCACCATGTCCTTCGACCGGGTCCCGGGATaGGGCTGGATGGGGCGTGTG +
Preference number: 4 (lower is better)
Translates to: NGPWPLPLLTFPAFTMSFDRVPG*GWMGRV
Trigger: CACACGCCCCATCCAGCCGCATCCCGGGACCCGGTC...GAAGGACATGGTGAAGGCTGGGAACGTGAGGAGAGGCAATGGCCACGGCCCATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CCA 90 bp AAAGGTCTGATCATTCTGTTCCCTGAGGCCCGCCGGGGAGGTCTGGCTTCATACCGGGATGCGGCTGGATaGGGCGTGTGCCCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: KGLIILFPEARRGGLASYRDAAG*GVCPGW
Trigger: CCAGCCCGGGCACACGCCCCATCCAGCCGCATCCCG...GTATGAAGCCAGACCTCCCCGGCGGGCCTCAGGGAACAGAATGATCAGACCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CCA 90 bp TGCAGCGAGGGACTGGGAGGGCCGAGGAGGTTCTCAGATGTTCTTCTCCTTTTGGTCCCGGGATGCGGCTaGATGGGGCGTGTGCCCGGG +
Preference number: 4 (lower is better)
Translates to: CSEGLGGPRRFSDVLLLLVPGCG*MGRVPG
Trigger: CCCGGGCACACGCCCCATCCAGCCGCATCCCGGGAC...CAAAAGGAGAAGAACATCTGAGAACCTCCTCGGCCCTCCCAGTCCCTCGCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CCA 90 bp TCACTTGTGGCCCAGATAGGCACCCAGGGTGATGCAAGCTCCCACCAGGGCCAAAAGTCGTCGCCGGCCTaGCGGAGGGTCAGGTGGACC +
Preference number: 4 (lower is better)
Translates to: SLVAQIGTQGDASSHQGQKSSPA*RRVRWT
Trigger: GGTCCACCTGACCCTCCGCCAGGCCGGCGACGACTT...TTGGCCCTGGTGGGAGCTTGCATCACCCTGGGTGCCTATCTGGGCCACAAGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR GCA 90 bp TCACTTGTGGCCCAGATAGGCACCCAGGGTGATGCAAGCTCCCACCAGGGCCAAGGTGGTTGCCAAGGCTaGAGGCGTGGGGGAACAGGC +
Preference number: 4 (lower is better)
Translates to: SLVAQIGTQGDASSHQGQGGCQG*RRGGTG
Trigger: GCCTGTTCCCCCACGCCTGCAGCCTTGGCAACCACC...TTGGCCCTGGTGGGAGCTTGCATCACCCTGGGTGCCTATCTGGGCCACAAGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677227.1
CDS-3UTR CCA 90 bp AATGGGCCGTGGCCATTGCCTCTCCTCACGTTCCCAGCCTTCACCATGTCCTTCGGCGTGTGCCCGGGCTaGGAGGAGAAGATGCCCGGT +
Preference number: 4 (lower is better)
Translates to: NGPWPLPLLTFPAFTMSFGVCPG*EEKMPG
Trigger: ACCGGGCATCTTCTCCTCCCAGCCCGGGCACACGCC...GAAGGACATGGTGAAGGCTGGGAACGTGAGGAGAGGCAATGGCCACGGCCCATT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GGGACTGGGAGGGCCGAGGAGGTTCTCAGATGTTCTTCTCCTTTTGGGGCTTTTCGGGATGCGGCTGGATaGGGCGTGTGCCCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GTGRAEEVLRCSSPFGAFRDAAG*GVCPGW
Trigger: CCAGCCCGGGCACACGCCCCATCCAGCCGCATCCCG...AAAAGCCCCAAAAGGAGAAGAACATCTGAGAACCTCCTCGGCCCTCCCAGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CCA 90 bp AAAGGTCTGATCATTCTGTTCCCTGAGGCCCGCCGGGGAGGTCTGGCTTCATACGCTCCTCCACCACCGTaGCAAAGCGTCCCCGCGCGG +
Preference number: 4 (lower is better)
Translates to: KGLIILFPEARRGGLASYAPPPP*QSVPAR
Trigger: CCGCGCGGGGACGCTTTGCCACGGTGGTGGAGGAGC...GTATGAAGCCAGACCTCCCCGGCGGGCCTCAGGGAACAGAATGATCAGACCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR TCA 90 bp CTCTCTTGCGGAGTATTTGTGCAGCGAGGGACTGGGAGGGCCGAGGAGGTTCTCGATAGGCACCCAGGGTaGTGCAAGCTCCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: LSCGVFVQRGTGRAEEVLDRHPG*CKLPPG
Trigger: CCCTGGTGGGAGCTTGCATCACCCTGGGTGCCTATC...GAGAACCTCCTCGGCCCTCCCAGTCCCTCGCTGCACAAATACTCCGCAAGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CACAGTTCCCAGTTTAGAGGGTCACTCTCCATCACCTGCCCAAAACTCAATCCCCGGGATGCGGCTGGATaGGGCGTGTGCCCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: HSSQFRGSLSITCPKLNPRDAAG*GVCPGW
Trigger: CCAGCCCGGGCACACGCCCCATCCAGCCGCATCCCG...GGGATTGAGTTTTGGGCAGGTGATGGAGAGTGACCCTCTAAACTGGGAACTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR CCA 90 bp GAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGGTGCTGTCCCGGGATGCGGCTaGATGGGGCGTGTGCCCGGG +
Preference number: 4 (lower is better)
Translates to: ESMFTGTEHPGGATRSGAVPGCG*MGRVPG
Trigger: CCCGGGCACACGCCCCATCCAGCCGCATCCCGGGAC...AGCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CTGCCAAATCTTCGGAGACGACCCGATGGCCATAGACCCTGTCAGCTGTCATTCCAGGTGGACCACAGGTaGCACCGGGCTGAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: LPNLRRRPDGHRPCQLSFQVDHR*HRAERR
Trigger: CCTGCGCTCAGCCCGGTGCCACCTGTGGTCCACCTG...GAATGACAGCTGACAGGGTCTATGGCCATCGGGTCGTCTCCGAAGATTTGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CCA 90 bp ACAGCCAAAATGGGCCGTGGCCATTGCCTCTCCTCACGTTCCCAGCCTTCACCATGTGCAGCGAGGGACTaGGAGGGCCGAGGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: TAKMGRGHCLSSRSQPSPCAARD*EGRGGS
Trigger: AGAACCTCCTCGGCCCTCCCAGTCCCTCGCTGCACA...TGGTGAAGGCTGGGAACGTGAGGAGAGGCAATGGCCACGGCCCATTTTGGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp TCCTCACGTTCCCAGCCTTCACCATGTCCTTCTGATAGGAAGGGCCCAGGGCCTCTCCCATGCTCCACGTaGAAACGGGCCTACCTGGAG +
Preference number: 4 (lower is better)
Translates to: SSRSQPSPCPSDRKGPGPLPCST*KRAYLE
Trigger: CTCCAGGTAGGCCCGTTTTCACGTGGAGCATGGGAG...AGGCCCTGGGCCCTTCCTATCAGAAGGACATGGTGAAGGCTGGGAACGTGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp CCCGCCGGGGAGGTCTGGCTTCATACCACAGGTTTCCTGCTTTCTTGGTGGAGCCGGTCAGGTTGGGAGTaGACGCTTTGTCCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: PAGEVWLHTTGFLLSWWSRSGWE*TLCPEE
Trigger: CTCCTCTGGACAAAGCGTTCACTCCCAACCTGACCG...GCTCCACCAAGAAAGCAGGAAACCTGTGGTATGAAGCCAGACCTCCCCGGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678349.1
CDS-3UTR GCA 90 bp CCACCAGTGTTCCCATCTTCTGTGCTCAGCTTGGTATGCAGAACAACCTTGTTGGCTGGGAGGAGAAGATaGCCGGTGCGGGGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: PPVFPSSVLSLVCRTTLLAGRRR*PVRGRP
Trigger: GGGCCGCCCCCGCACCGGGCATCTTCTCCTCCCAGC...CAACAAGGTTGTTCTGCATACCAAGCTGAGCACAGAAGATGGGAACACTGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR GCA 90 bp CCCACAGGAACCCTCCCTCTGTTAATATCACAGCCCCCAGGGCAAAGAAATGCAGCTGGATGGGGCGTGTaGCCGGGCTGGGAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: PTGTLPLLISQPPGQRNAAGWGV*PGWEEK
Trigger: CTTCTCCTCCCAGCCCGGGCACACGCCCCATCCAGC...TGCATTTCTTTGCCCTGGGGGCTGTGATATTAACAGAGGGAGGGTTCCTGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR GCA 90 bp GAAATCAAACAGAGGCCGCATGCTGGGGCCGTACAGTTCCACAAAGGCATCAAAGACCGGGTCCCGGGATaGGGCTGGATGGGGCGTGTG +
Preference number: 4 (lower is better)
Translates to: EIKQRPHAGAVQFHKGIKDRVPG*GWMGRV
Trigger: CACACGCCCCATCCAGCCGCATCCCGGGACCCGGTC...TTTGATGCCTTTGTGGAACTGTACGGCCCCAGCATGCGGCCTCTGTTTGATTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678134.1
CDS-3UTR CCA 90 bp CATCCGTCTGCTCTTCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTAGCAGCGGCGAGGTCCTaGCGACCGGGTCCCGGGATG +
Preference number: 4 (lower is better)
Translates to: HPSALQMVIRPTTWKANLAAARS*RPGPGM
Trigger: CATCCCGGGACCCGGTCGCCAGGACCTCGCCGCTGC...TAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGAAGAGCAGACGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CCA 90 bp TGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGGTGCTTGGCAATTGGCGGAGGGTCAGGTaGACCACAGGTGGCACCGGG +
Preference number: 4 (lower is better)
Translates to: CLQAQNIQVEPHEAVLGNWRRVR*TTGGTG
Trigger: CCCGGTGCCACCTGTGGTCCACCTGACCCTCCGCCA...ATTGCCAAGCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GGCCATAGACCCTGTCAGCTGTCATTCTGGCCTCTCTTGCGGAGTATTTGTGCAAAGTCGTCGCCGGCCTaGCGGAGGGTCAGGTGGACC +
Preference number: 4 (lower is better)
Translates to: GHRPCQLSFWPLLRSICAKSSPA*RRVRWT
Trigger: GGTCCACCTGACCCTCCGCCAGGCCGGCGACGACTT...TGCACAAATACTCCGCAAGAGAGGCCAGAATGACAGCTGACAGGGTCTATGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CCA 90 bp TCACTTGTGGCCCAGATAGGCACCCAGGGTGATGCAAGCTCCCACCAGGGCCAAACAGAGGCCGCATGCTaGGGCCGTACAGTTCCACAA +
Preference number: 4 (lower is better)
Translates to: SLVAQIGTQGDASSHQGQTEAAC*GRTVPQ
Trigger: TTGTGGAACTGTACGGCCCCAGCATGCGGCCTCTGT...TTGGCCCTGGTGGGAGCTTGCATCACCCTGGGTGCCTATCTGGGCCACAAGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GCCACACAGCCAACGTGCCATGTGCTACAGCCAAAATGGGCCGTGGCCATTGCCGGCGGCCTGATGCTCTaGGTAACTCTAGCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: ATQPTCHVLQPKWAVAIAGGLML*VTLAFL
Trigger: CAGGAAGGCTAGAGTTACCCAGAGCATCAGGCCGCC...GGCAATGGCCACGGCCCATTTTGGCTGTAGCACATGGCACGTTGGCTGTGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp ACTCTGATTTTATTTCGCCGGCTCCACAGCCTCCCATTGCCCCAGGAGCCCACCCCCGCCGGGGAGGTCTaGCTTCATACCACAGGTTTC +
Preference number: 4 (lower is better)
Translates to: TLILFRRLHSLPLPQEPTPAGEV*LHTTGF
Trigger: GAAACCTGTGGTATGAAGCCAGACCTCCCCGGCGGG...GGTGGGCTCCTGGGGCAATGGGAGGCTGTGGAGCCGGCGAAATAAAATCAGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000678349.1
CDS-3UTR CCA 90 bp AAAGGTCTGATCATTCTGTTCCCTGAGGCCCGCCGGGGAGGTCTGGCTTCATACTGTGCAGCGAGGGACTaGGAGGGCCGAGGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: KGLIILFPEARRGGLASYCAARD*EGRGGS
Trigger: AGAACCTCCTCGGCCCTCCCAGTCCCTCGCTGCACA...GTATGAAGCCAGACCTCCCCGGCGGGCCTCAGGGAACAGAATGATCAGACCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp ACTCTGATTTTATTTCGCCGGCTCCACAGCCTCCCATTGCCCCAGGAGCCCACCCAAGCCAGGAAACGGTaGTCCTGGGGACTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: TLILFRRLHSLPLPQEPTQARKR*SWGLLD
Trigger: GTCCAGGAGTCCCCAGGACCACCGTTTCCTGGCTTG...GGTGGGCTCCTGGGGCAATGGGAGGCTGTGGAGCCGGCGAAATAAAATCAGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000589955.2
ENST00000678349.1
3UTR CAA 72 bp CGTGCCATGTGCTACAGCCAAAATGGGCCGTGGCCATaGCCTCTCCTCACGTTCCCAGCCTTCACCATGTCC +
Preference number: 4 (lower is better)
Translates to: RAMCYSQNGPWP*PLLTFPAFTMS
Trigger: GGACATGGTGAAGGCTGGGAACGTGAGGAGAGGCAATGGCCACGGCCCATTTTGGCTGTAGCACATGGCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR CAA 72 bp CTGTCAGCTGTCATTCTGGCCTCTCTTGCGGAGTATTaGTGCAGCGAGGGACTGGGAGGGCCGAGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: LSAVILASLAEY*CSEGLGGPRRF
Trigger: GAACCTCCTCGGCCCTCCCAGTCCCTCGCTGCACAAATACTCCGCAAGAGAGGCCAGAATGACAGCTGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR CAA 72 bp GGCCATAGACCCTGTCAGCTGTCATTCTGGCCTCTCTaGCGGAGTATTTGTGCAGCGAGGGACTGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: GHRPCQLSFWPL*RSICAARDWEG
Trigger: GCCCTCCCAGTCCCTCGCTGCACAAATACTCCGCAAGAGAGGCCAGAATGACAGCTGACAGGGTCTATGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR CAA 72 bp TGGCAGGCGTTATCGGTCAGGTTGGGAGTGAACGCTTaGTCCAGAGGAGGAGGTAGGGACGCCGGGAAGCAA +
Preference number: 4 (lower is better)
Translates to: WQALSVRLGVNA*SRGGGRDAGKQ
Trigger: TTGCTTCCCGGCGTCCCTACCTCCTCCTCTGGACAAAGCGTTCACTCCCAACCTGACCGATAACGCCTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589955.2
ENST00000678349.1
CDS-3UTR TCA 90 bp TTTAAGGGCATTTTTCCCATCGCTGTCCTTCGGCGTGGAAATCTCAGTGGGTACAGCGTCCCCGCGCGGTaGAGGGCGTCAGGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: FKGIFPIAVLRRGNLSGYSVPAR*RASGAA
Trigger: AGCTGCACCTGACGCCCTTCACCGCGCGGGGACGCT...GTACCCACTGAGATTTCCACGCCGAAGGACAGCGATGGGAAAAATGCCCTTAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR TCA 90 bp GTCAGCTGTCATTCTGGCCTCTCTTGCGGAGTATTTGTGCAGCGAGGGACTGGGACCACACTGCCCTGTTaGTCATCCCTGGAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: VSCHSGLSCGVFVQRGTGTTLPC*SSLEEA
Trigger: GGCCTCCTCCAGGGATGATCAACAGGGCAGTGTGGT...CCCAGTCCCTCGCTGCACAAATACTCCGCAAGAGAGGCCAGAATGACAGCTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp CTGCCAAATCTTCGGAGACGACCCGATGGCCATAGACCCTGTCAGCTGTCATTCCCTGAAGGACAGCCATaGGAAAGCCCCCGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: LPNLRRRPDGHRPCQLSFPEGQP*ESPRGR
Trigger: CCTTCCGCGGGGGCTTTCTCATGGCTGTCCTTCAGG...GAATGACAGCTGACAGGGTCTATGGCCATCGGGTCGTCTCCGAAGATTTGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp CGAAGCGGTGCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGATGGCTGGGAGGAGAAGATaGCCGGTGCGGGGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: RSGAWQLVVGFPKTGVLMAGRRR*PVRGRP
Trigger: GGGCCGCCCCCGCACCGGGCATCTTCTCCTCCCAGC...CATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACCGCTTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR GCA 90 bp CGCATGCTGGGGCCGTACAGTTCCACAAAGGCATCCGTTCATAGCAGCATTATTGCTGGATGGGGCGTGTaGCCGGGCTGGGAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: RMLGPYSSTKASVHSSIIAGWGV*PGWEEK
Trigger: CTTCTCCTCCCAGCCCGGGCACACGCCCCATCCAGC...AATAATGCTGCTATGAACGGATGCCTTTGTGGAACTGTACGGCCCCAGCATGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677227.1
CDS-3UTR GCA 90 bp ATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGGTGCTTGGCTGGATGGGGCGTGTaGCCGGGCTGGGAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: IYVYRHRTSRWSHTKRCLAGWGV*PGWEEK
Trigger: CTTCTCCTCCCAGCCCGGGCACACGCCCCATCCAGC...CAAGCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR GCA 90 bp AAAGGTCTGATCATTCTGTTCCCTGAGGCCCGCCGGGGAGGTCTGGCTTCATACGTGAAGGGCGTCAGGTaGAGCTGGCTGGACATCTCG +
Preference number: 4 (lower is better)
Translates to: KGLIILFPEARRGGLASYVKGVR*SWLDIS
Trigger: CGAGATGTCCAGCCAGCTGCACCTGACGCCCTTCAC...GTATGAAGCCAGACCTCCCCGGCGGGCCTCAGGGAACAGAATGATCAGACCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR GCA 90 bp ACTCTGATTTTATTTCGCCGGCTCCACAGCCTCCCATTGCCCCAGGAGCCCACCTCCTGGATCCAGGTGTaGAGGTGCCGGTTCAGGTAC +
Preference number: 4 (lower is better)
Translates to: TLILFRRLHSLPLPQEPTSWIQV*RCRFRY
Trigger: GTACCTGAACCGGCACCTGCACACCTGGATCCAGGA...GGTGGGCTCCTGGGGCAATGGGAGGCTGTGGAGCCGGCGAAATAAAATCAGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589955.2
ENST00000678349.1
CDS-3UTR GCA 90 bp CCCGCCGGGGAGGTCTGGCTTCATACCACAGGTTTCCTGCTTTCTTGGTGGAGCAGCCACACGAAGCGGTaGTTGGCAATTAGTGGTCGG +
Preference number: 4 (lower is better)
Translates to: PAGEVWLHTTGFLLSWWSSHTKR*LAISGR
Trigger: CCGACCACTAATTGCCAAGCACCGCTTCGTGTGGCT...GCTCCACCAAGAAAGCAGGAAACCTGTGGTATGAAGCCAGACCTCCCCGGCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp CATCCGTCTGCTCTTCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATCCTCCTCCTGGTCCTaGGCGGCGGCGCTGGCTACG +
Preference number: 4 (lower is better)
Translates to: HPSALQMVIRPTTWKANLSSSWS*AAALAT
Trigger: CGTAGCCAGCGCCGCCGCGCAGGACCAGGAGGAGGA...TAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGAAGAGCAGACGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398117.1
CDS-3UTR CCA 90 bp TGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAACGGGATGCGGCTGGATaGGGCGTGTGCCCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: WKANLCLQAQNIQVEPHERDAAG*GVCPGW
Trigger: CCAGCCCGGGCACACGCCCCATCCAGCCGCATCCCG...TTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CCTCCCACCAGGTATGCATCATGTGAGTCATATGCAAAGAGTCTCTTCTTCAGGGTCCCGGGATGCGGCTaGATGGGGCGTGTGCCCGGG +
Preference number: 4 (lower is better)
Translates to: PPTRYASCESYAKSLFFRVPGCG*MGRVPG
Trigger: CCCGGGCACACGCCCCATCCAGCCGCATCCCGGGAC...CCTGAAGAAGAGACTCTTTGCATATGACTCACATGATGCATACCTGGTGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GGTGCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGATGGGACTGGTCCCGGGATGCGGCTaGATGGGGCGTGTGCCCGGG +
Preference number: 4 (lower is better)
Translates to: GAWQLVVGFPKTGVLMGLVPGCG*MGRVPG
Trigger: CCCGGGCACACGCCCCATCCAGCCGCATCCCGGGAC...CAGTCCCATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CCA 90 bp ATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAGCAGCGGCGAGGTCCTaGCGACCGGGTCCCGGGATG +
Preference number: 4 (lower is better)
Translates to: MESESMFTGTEHPGGATRAAARS*RPGPGM
Trigger: CATCCCGGGACCCGGTCGCCAGGACCTCGCCGCTGC...TCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CGCATGCTGGGGCCGTACAGTTCCACAAAGGCATCCGTTCATAGCAGCATTATTCAGGTGGACCACAGGTaGCACCGGGCTGAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: RMLGPYSSTKASVHSSIIQVDHR*HRAERR
Trigger: CCTGCGCTCAGCCCGGTGCCACCTGTGGTCCACCTG...AATAATGCTGCTATGAACGGATGCCTTTGTGGAACTGTACGGCCCCAGCATGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677227.1
CDS-3UTR CCA 90 bp GAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGGTGCTTGGCGGAGGGTCAGGTaGACCACAGGTGGCACCGGG +
Preference number: 4 (lower is better)
Translates to: ESMFTGTEHPGGATRSGAWRRVR*TTGGTG
Trigger: CCCGGTGCCACCTGTGGTCCACCTGACCCTCCGCCA...AGCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CCA 90 bp AAAGGTCTGATCATTCTGTTCCCTGAGGCCCGCCGGGGAGGTCTGGCTTCATACTCAGGTGCAGCTGGCTaGACATCTCGGCGAAGTCGC +
Preference number: 4 (lower is better)
Translates to: KGLIILFPEARRGGLASYSGAAG*TSRRSR
Trigger: GCGACTTCGCCGAGATGTCCAGCCAGCTGCACCTGA...GTATGAAGCCAGACCTCCCCGGCGGGCCTCAGGGAACAGAATGATCAGACCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GATTTAAGGGCATTTTTCCCATCGCTGTCCTTCGGCGTGGAAATCTCAGTGGGTGCTCCTCCACCACCGTaGCAAAGCGTCCCCGCGCGG +
Preference number: 4 (lower is better)
Translates to: DLRAFFPSLSFGVEISVGAPPPP*QSVPAR
Trigger: CCGCGCGGGGACGCTTTGCCACGGTGGTGGAGGAGC...ACCCACTGAGATTTCCACGCCGAAGGACAGCGATGGGAAAAATGCCCTTAAATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GCCACACAGCCAACGTGCCATGTGCTACAGCCAAAATGGGCCGTGGCCATTGCCGTGCTACAGCCAAAATaGGCCGTGGCCATTGCCTCT +
Preference number: 4 (lower is better)
Translates to: ATQPTCHVLQPKWAVAIAVLQPK*AVAIAS
Trigger: AGAGGCAATGGCCACGGCCCATTTTGGCTGTAGCAC...GGCAATGGCCACGGCCCATTTTGGCTGTAGCACATGGCACGTTGGCTGTGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp GGTGCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGATGGGACTGAGCGTCCCCGCGCGGTaGAGGGCGTCAGGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: GAWQLVVGFPKTGVLMGLSVPAR*RASGAA
Trigger: AGCTGCACCTGACGCCCTTCACCGCGCGGGGACGCT...CAGTCCCATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR TCA 90 bp ATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGTCCCCGCGCGGTaGAGGGCGTCAGGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: MESESMFTGTEHPGGATRSVPAR*RASGAA
Trigger: AGCTGCACCTGACGCCCTTCACCGCGCGGGGACGCT...TCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR TCA 90 bp ACTCTGATTTTATTTCGCCGGCTCCACAGCCTCCCATTGCCCCAGGAGCCCACCCGCTCTCCACACACATaGCCCCACCGAACTCAAAGA +
Preference number: 4 (lower is better)
Translates to: TLILFRRLHSLPLPQEPTRSPHT*PHRTQR
Trigger: TCTTTGAGTTCGGTGGGGTCATGTGTGTGGAGAGCG...GGTGGGCTCCTGGGGCAATGGGAGGCTGTGGAGCCGGCGAAATAAAATCAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000589955.2
ENST00000678349.1
CDS-3UTR TCA 90 bp ACAGCCAAAATGGGCCGTGGCCATTGCCTCTCCTCACGTTCCCAGCCTTCACCACGCTCTCCACACACATaGCCCCACCGAACTCAAAGA +
Preference number: 4 (lower is better)
Translates to: TAKMGRGHCLSSRSQPSPRSPHT*PHRTQR
Trigger: TCTTTGAGTTCGGTGGGGTCATGTGTGTGGAGAGCG...TGGTGAAGGCTGGGAACGTGAGGAGAGGCAATGGCCACGGCCCATTTTGGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR TCA 90 bp GTGATACATGTCTTAAGAAGGGTCGTGGCTCCCATGCTCCACGTGAAAACGGGCGATAGGCACCCAGGGTaGTGCAAGCTCCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: VIHVLRRVVAPMLHVKTGDRHPG*CKLPPG
Trigger: CCCTGGTGGGAGCTTGCATCACCCTGGGTGCCTATC...GCCCGTTTTCACGTGGAGCATGGGAGCCACGACCCTTCTTAAGACATGTATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp CTGCCAAATCTTCGGAGACGACCCGATGGCCATAGACCCTGTCAGCTGTCATTCCTCCCATGCTCCACGTaGAAACGGGCCTACCTGGAG +
Preference number: 4 (lower is better)
Translates to: LPNLRRRPDGHRPCQLSFLPCST*KRAYLE
Trigger: CTCCAGGTAGGCCCGTTTTCACGTGGAGCATGGGAG...GAATGACAGCTGACAGGGTCTATGGCCATCGGGTCGTCTCCGAAGATTTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp CTGATGCGGAAGTCACCGAAATGTTCACTTCCTCAAGTTCCAGAGGATTCTGTTGCTGGGAGGAGAAGATaGCCGGTGCGGGGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: LMRKSPKCSLPQVPEDSVAGRRR*PVRGRP
Trigger: GGGCCGCCCCCGCACCGGGCATCTTCTCCTCCCAGC...AACAGAATCCTCTGGAACTTGAGGAAGTGAACATTTCGGTGACTTCCGCATCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR GCA 90 bp ATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACGCTGGGAGGAGAAGATaGCCGGTGCGGGGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: MVIRPTTWKANLCLQAQNAGRRR*PVRGRP
Trigger: GGGCCGCCCCCGCACCGGGCATCTTCTCCTCCCAGC...GTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR GCA 90 bp AACTCAATCCCTTGCCTGCAAGAGTCCCTTTGTCTTAAAGAAGCTGCAAGGTCAGCTGGGAGGAGAAGATaGCCGGTGCGGGGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: NSIPCLQESLCLKEAARSAGRRR*PVRGRP
Trigger: GGGCCGCCCCCGCACCGGGCATCTTCTCCTCCCAGC...TGACCTTGCAGCTTCTTTAAGACAAAGGGACTCTTGCAGGCAAGGGATTGAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR GCA 90 bp AATGGGCCGTGGCCATTGCCTCTCCTCACGTTCCCAGCCTTCACCATGTCCTTCATCCAGGTGTGCAGGTaGCGGTTCAGGTACTCAGTC +
Preference number: 4 (lower is better)
Translates to: NGPWPLPLLTFPAFTMSFIQVCR*RFRYSV
Trigger: GACTGAGTACCTGAACCGGCACCTGCACACCTGGAT...GAAGGACATGGTGAAGGCTGGGAACGTGAGGAGAGGCAATGGCCACGGCCCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR GCA 90 bp TGCAGCGAGGGACTGGGAGGGCCGAGGAGGTTCTCAGATGTTCTTCTCCTTTTGCTTGCGGAGTATTTGTaGAGCGAGGGACTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: CSEGLGGPRRFSDVLLLLLAEYL*SEGLGG
Trigger: CCCTCCCAGTCCCTCGCTGCACAAATACTCCGCAAG...CAAAAGGAGAAGAACATCTGAGAACCTCCTCGGCCCTCCCAGTCCCTCGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp CAAGTTCCAGAGGATTCTGTTTCTTACTCAGACAGAGCCAGTATTGGGAGTTGGGACCCCCTCTTCCGCTaGACCCCACCGGCGCACCCC +
Preference number: 4 (lower is better)
Translates to: QVPEDSVSYSDRASIGSWDPLFR*TPPAHP
Trigger: GGGGTGCGCCGGTGGGGTGCAGCGGAAGAGGGGGTC...CCAACTCCCAATACTGGCTCTGTCTGAGTAAGAAACAGAATCCTCTGGAACTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398117.1
CDS-3UTR CCA 90 bp CCGTCTGCTCTTCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTGGCGTGTGCCCGGGCTaGGAGGAGAAGATGCCCGGT +
Preference number: 4 (lower is better)
Translates to: PSALQMVIRPTTWKANLCGVCPG*EEKMPG
Trigger: ACCGGGCATCTTCTCCTCCCAGCCCGGGCACACGCC...ACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGAAGAGCAGACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CCA 90 bp TATGCATCATGTGAGTCATATGCAAAGAGTCTCTTCTTCAGGCCAGGGAGGCATCGGGATGCGGCTGGATaGGGCGTGTGCCCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: YASCESYAKSLFFRPGRHRDAAG*GVCPGW
Trigger: CCAGCCCGGGCACACGCCCCATCCAGCCGCATCCCG...ATGCCTCCCTGGCCTGAAGAAGAGACTCTTTGCATATGACTCACATGATGCATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CCA 90 bp AACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCGTCCCGGGATGCGGCTaGATGGGGCGTGTGCCCGGG +
Preference number: 4 (lower is better)
Translates to: NNMESESMFTGTEHPGGAVPGCG*MGRVPG
Trigger: CCCGGGCACACGCCCCATCCAGCCGCATCCCGGGAC...GGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGCAGCGGCGAGGTCCTaGCGACCGGGTCCCGGGATG +
Preference number: 4 (lower is better)
Translates to: DPANNMESESMFTGTEHPAAARS*RPGPGM
Trigger: CATCCCGGGACCCGGTCGCCAGGACCTCGCCGCTGC...TGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GCAACATCAACTACTCTTAGAGCAAGTGCAGCCACAATACTGTACAGTTCTGGGGCAGCGGCGAGGTCCTaGCGACCGGGTCCCGGGATG +
Preference number: 4 (lower is better)
Translates to: ATSTTLRASAATILYSSGAAARS*RPGPGM
Trigger: CATCCCGGGACCCGGTCGCCAGGACCTCGCCGCTGC...CCCAGAACTGTACAGTATTGTGGCTGCACTTGCTCTAAGAGTAGTTGATGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCTGGCGGAGGGTCAGGTaGACCACAGGTGGCACCGGG +
Preference number: 4 (lower is better)
Translates to: ESESMFTGTEHPGGATRSWRRVR*TTGGTG
Trigger: CCCGGTGCCACCTGTGGTCCACCTGACCCTCCGCCA...GCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CCA 90 bp AAGGTTCTTCGCAGAGGCATCACATCGACCCCAATACAGGTCCTTCATACCCTTAAGTCGTCGCCGGCCTaGCGGAGGGTCAGGTGGACC +
Preference number: 4 (lower is better)
Translates to: KVLRRGITSTPIQVLHTLKSSPA*RRVRWT
Trigger: GGTCCACCTGACCCTCCGCCAGGCCGGCGACGACTT...AAGGGTATGAAGGACCTGTATTGGGGTCGATGTGATGCCTCTGCGAAGAACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CAAACAGAGGCCGCATGCTGGGGCCGTACAGTTCCACAAAGGCATCCGTTCATATCAGGTGCAGCTGGCTaGACATCTCGGCGAAGTCGC +
Preference number: 4 (lower is better)
Translates to: QTEAACWGRTVPQRHPFISGAAG*TSRRSR
Trigger: GCGACTTCGCCGAGATGTCCAGCCAGCTGCACCTGA...TATGAACGGATGCCTTTGTGGAACTGTACGGCCCCAGCATGCGGCCTCTGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677227.1
CDS-3UTR TCA 90 bp GGGACTGGGAGGGCCGAGGAGGTTCTCAGATGTTCTTCTCCTTTTGGGGCTTTTAAGCTGCTGGATAAATaGAGGCAGGACGCGCCTGGC +
Preference number: 4 (lower is better)
Translates to: GTGRAEEVLRCSSPFGAFKLLDK*RQDAPG
Trigger: GCCAGGCGCGTCCTGCCTTCATTTATCCAGCAGCTT...AAAAGCCCCAAAAGGAGAAGAACATCTGAGAACCTCCTCGGCCCTCCCAGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333681.5
ENST00000398117.1
CDS-3UTR TCA 90 bp ACCCAGGGTGATGCAAGCTCCCACCAGGGCCAAACTGAGCAGAGTCTTCAGAGACGCTCTCCACACACATaGCCCCACCGAACTCAAAGA +
Preference number: 4 (lower is better)
Translates to: TQGDASSHQGQTEQSLQRRSPHT*PHRTQR
Trigger: TCTTTGAGTTCGGTGGGGTCATGTGTGTGGAGAGCG...TCTCTGAAGACTCTGCTCAGTTTGGCCCTGGTGGGAGCTTGCATCACCCTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR TCA 90 bp ACTCTGATTTTATTTCGCCGGCTCCACAGCCTCCCATTGCCCCAGGAGCCCACCCCTGGACCTTCAGCTTaGGAAACACTGAAGGGGTAC +
Preference number: 4 (lower is better)
Translates to: TLILFRRLHSLPLPQEPTPGPSA*ETLKGY
Trigger: GTACCCCTTCAGTGTTTCTCAAGCTGAAGGTCCAGG...GGTGGGCTCCTGGGGCAATGGGAGGCTGTGGAGCCGGCGAAATAAAATCAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000589955.2
ENST00000678349.1
CDS-3UTR GCA 90 bp CCTCCCACCAGGTATGCATCATGTGAGTCATATGCAAAGAGTCTCTTCTTCAGGGCTGGATGGGGCGTGTaGCCGGGCTGGGAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: PPTRYASCESYAKSLFFRAGWGV*PGWEEK
Trigger: CTTCTCCTCCCAGCCCGGGCACACGCCCCATCCAGC...CCTGAAGAAGAGACTCTTTGCATATGACTCACATGATGCATACCTGGTGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR GCA 90 bp CTGATGCGGAAGTCACCGAAATGTTCACTTCCTCAAGTTCCAGAGGATTCTGTTGACCGGGTCCCGGGATaGGGCTGGATGGGGCGTGTG +
Preference number: 4 (lower is better)
Translates to: LMRKSPKCSLPQVPEDSVDRVPG*GWMGRV
Trigger: CACACGCCCCATCCAGCCGCATCCCGGGACCCGGTC...AACAGAATCCTCTGGAACTTGAGGAAGTGAACATTTCGGTGACTTCCGCATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR GCA 90 bp AATGGGCCGTGGCCATTGCCTCTCCTCACGTTCCCAGCCTTCACCATGTCCTTCATTCGGAGACCACACTaGCCTGTTGATCATCCCTGG +
Preference number: 4 (lower is better)
Translates to: NGPWPLPLLTFPAFTMSFIRRPH*PVDHPW
Trigger: CCAGGGATGATCAACAGGGCAGTGTGGTCTCCGAAT...GAAGGACATGGTGAAGGCTGGGAACGTGAGGAGAGGCAATGGCCACGGCCCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp GGGACTGGGAGGGCCGAGGAGGTTCTCAGATGTTCTTCTCCTTTTGGGGCTTTTCTTGCGGAGTATTTGTaGAGCGAGGGACTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: GTGRAEEVLRCSSPFGAFLAEYL*SEGLGG
Trigger: CCCTCCCAGTCCCTCGCTGCACAAATACTCCGCAAG...AAAAGCCCCAAAAGGAGAAGAACATCTGAGAACCTCCTCGGCCCTCCCAGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CGAAGCGGTGCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGATGGGCGTGTGCCCGGGCTaGGAGGAGAAGATGCCCGGT +
Preference number: 4 (lower is better)
Translates to: RSGAWQLVVGFPKTGVLMGVCPG*EEKMPG
Trigger: ACCGGGCATCTTCTCCTCCCAGCCCGGGCACACGCC...CATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACCGCTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CCTCCCACCAGGTATGCATCATGTGAGTCATATGCAAAGAGTCTCTTCTTCAGGTGGCGGAGGGTCAGGTaGACCACAGGTGGCACCGGG +
Preference number: 4 (lower is better)
Translates to: PPTRYASCESYAKSLFFRWRRVR*TTGGTG
Trigger: CCCGGTGCCACCTGTGGTCCACCTGACCCTCCGCCA...CCTGAAGAAGAGACTCTTTGCATATGACTCACATGATGCATACCTGGTGGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GTGATACATGTCTTAAGAAGGGTCGTGGCTCCCATGCTCCACGTGAAAACGGGCTCAGGTGCAGCTGGCTaGACATCTCGGCGAAGTCGC +
Preference number: 4 (lower is better)
Translates to: VIHVLRRVVAPMLHVKTGSGAAG*TSRRSR
Trigger: GCGACTTCGCCGAGATGTCCAGCCAGCTGCACCTGA...GCCCGTTTTCACGTGGAGCATGGGAGCCACGACCCTTCTTAAGACATGTATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CCA 90 bp TTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGGTGCTTGGCAATTAGGCGTCAGGTGCAGCTaGCTGGACATCTCGGCGAAG +
Preference number: 4 (lower is better)
Translates to: FTGTEHPGGATRSGAWQLGVRCS*LDISAK
Trigger: CTTCGCCGAGATGTCCAGCCAGCTGCACCTGACGCC...TAATTGCCAAGCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CACAGTTCCCAGTTTAGAGGGTCACTCTCCATCACCTGCCCAAAACTCAATCCCGGCGTCAGGTGCAGCTaGCTGGACATCTCGGCGAAG +
Preference number: 4 (lower is better)
Translates to: HSSQFRGSLSITCPKLNPGVRCS*LDISAK
Trigger: CTTCGCCGAGATGTCCAGCCAGCTGCACCTGACGCC...GGGATTGAGTTTTGGGCAGGTGATGGAGAGTGACCCTCTAAACTGGGAACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR CCA 90 bp TTCCTGATGCGGAAGTCACCGAAATGTTCACTTCCTCAAGTTCCAGAGGATTCTGCTCCTCCACCACCGTaGCAAAGCGTCCCCGCGCGG +
Preference number: 4 (lower is better)
Translates to: FLMRKSPKCSLPQVPEDSAPPPP*QSVPAR
Trigger: CCGCGCGGGGACGCTTTGCCACGGTGGTGGAGGAGC...AGAATCCTCTGGAACTTGAGGAAGTGAACATTTCGGTGACTTCCGCATCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CTGATGCGGAAGTCACCGAAATGTTCACTTCCTCAAGTTCCAGAGGATTCTGTTGCTCCTCCACCACCGTaGCAAAGCGTCCCCGCGCGG +
Preference number: 4 (lower is better)
Translates to: LMRKSPKCSLPQVPEDSVAPPPP*QSVPAR
Trigger: CCGCGCGGGGACGCTTTGCCACGGTGGTGGAGGAGC...AACAGAATCCTCTGGAACTTGAGGAAGTGAACATTTCGGTGACTTCCGCATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GCCACACAGCCAACGTGCCATGTGCTACAGCCAAAATGGGCCGTGGCCATTGCCGCCAGTATTGGGAGTTaGGGGGTGCGTATCCAAAAT +
Preference number: 4 (lower is better)
Translates to: ATQPTCHVLQPKWAVAIAASIGS*GVRIQN
Trigger: ATTTTGGATACGCACCCCCCAACTCCCAATACTGGC...GGCAATGGCCACGGCCCATTTTGGCTGTAGCACATGGCACGTTGGCTGTGTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CCCACAGGAACCCTCCCTCTGTTAATATCACAGCCCCCAGGGCAAAGAAATGCACCTGTTGATCATCCCTaGAGGAGGCCAGTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: PTGTLPLLISQPPGQRNAPVDHP*RRPVRA
Trigger: GGCCCTCACTGGCCTCCTCCAGGGATGATCAACAGG...TGCATTTCTTTGCCCTGGGGGCTGTGATATTAACAGAGGGAGGGTTCCTGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp TGGGTACTAGGTCCATCTGAAGTTCCCAACTCTTTTCCTCCCACCAGGTATGCAGATAGGCACCCAGGGTaGTGCAAGCTCCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: WVLGPSEVPNSFPPTRYADRHPG*CKLPPG
Trigger: CCCTGGTGGGAGCTTGCATCACCCTGGGTGCCTATC...TGCATACCTGGTGGGAGGAAAAGAGTTGGGAACTTCAGATGGACCTAGTACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp GAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGATAGGCACCCAGGGTaGTGCAAGCTCCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: ESESMFTGTEHPGGATRSDRHPG*CKLPPG
Trigger: CCCTGGTGGGAGCTTGCATCACCCTGGGTGCCTATC...GCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp AAAGGTCTGATCATTCTGTTCCCTGAGGCCCGCCGGGGAGGTCTGGCTTCATACCTGCTCTTCAGATGGTaGTCCGGCCAACAACATGGA +
Preference number: 4 (lower is better)
Translates to: KGLIILFPEARRGGLASYLLFRW*SGQQHG
Trigger: TCCATGTTGTTGGCCGGATCACCATCTGAAGAGCAG...GTATGAAGCCAGACCTCCCCGGCGGGCCTCAGGGAACAGAATGATCAGACCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp CCCGCCGGGGAGGTCTGGCTTCATACCACAGGTTTCCTGCTTTCTTGGTGGAGCAGAAATGCAAGTGAATaGACACCTTCTCCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: PAGEVWLHTTGFLLSWWSRNASE*TPSPQP
Trigger: AGGCTGGGGAGAAGGTGTTCATTCACTTGCATTTCT...GCTCCACCAAGAAAGCAGGAAACCTGTGGTATGAAGCCAGACCTCCCCGGCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp CCGTCTGCTCTTCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTCCTGAAGGACAGCCATaGGAAAGCCCCCGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: PSALQMVIRPTTWKANLCPEGQP*ESPRGR
Trigger: CCTTCCGCGGGGGCTTTCTCATGGCTGTCCTTCAGG...ACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGAAGAGCAGACGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp GTCACCGAAATGTTCACTTCCTCAAGTTCCAGAGGATTCTGTTTCTTACTCAGAGCTGGGAGGAGAAGATaGCCGGTGCGGGGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: VTEMFTSSSSRGFCFLLRAGRRR*PVRGRP
Trigger: GGGCCGCCCCCGCACCGGGCATCTTCTCCTCCCAGC...TCTGAGTAAGAAACAGAATCCTCTGGAACTTGAGGAAGTGAACATTTCGGTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR GCA 90 bp CCCACAGGAACCCTCCCTCTGTTAATATCACAGCCCCCAGGGCAAAGAAATGCACAAACAGAGGCCGCATaGTGGGGCCGTACAGTTCCA +
Preference number: 4 (lower is better)
Translates to: PTGTLPLLISQPPGQRNAQTEAA*WGRTVP
Trigger: TGGAACTGTACGGCCCCAGCATGCGGCCTCTGTTTG...TGCATTTCTTTGCCCTGGGGGCTGTGATATTAACAGAGGGAGGGTTCCTGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp CTCTCTTGCGGAGTATTTGTGCAGCGAGGGACTGGGAGGGCCGAGGAGGTTCTCCTTTTTCCATCCGTCTaGTCTTCAGATGGTGATCCG +
Preference number: 4 (lower is better)
Translates to: LSCGVFVQRGTGRAEEVLLFPSV*SSDGDP
Trigger: CGGATCACCATCTGAAGAGCAGACGGATGGAAAAAG...GAGAACCTCCTCGGCCCTCCCAGTCCCTCGCTGCACAAATACTCCGCAAGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp AATGGGCCGTGGCCATTGCCTCTCCTCACGTTCCCAGCCTTCACCATGTCCTTCAGAGTTTTCTGCCCCTaGCAAATCTTCGGAGACGAC +
Preference number: 4 (lower is better)
Translates to: NGPWPLPLLTFPAFTMSFRVFCP*QIFGDD
Trigger: GTCGTCTCCGAAGATTTGGCAGGGGCAGAAAACTCT...GAAGGACATGGTGAAGGCTGGGAACGTGAGGAGAGGCAATGGCCACGGCCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp TGCAGCGAGGGACTGGGAGGGCCGAGGAGGTTCTCAGATGTTCTTCTCCTTTTGACTCACATCACCAAGTaGACCTACCCAGCCTCCGTT +
Preference number: 4 (lower is better)
Translates to: CSEGLGGPRRFSDVLLLLTHITK*TYPASV
Trigger: AACGGAGGCTGGGTAGGTGCACTTGGTGATGTGAGT...CAAAAGGAGAAGAACATCTGAGAACCTCCTCGGCCCTCCCAGTCCCTCGCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678349.1
CDS-3UTR CCA 90 bp TATGCATCATGTGAGTCATATGCAAAGAGTCTCTTCTTCAGGCCAGGGAGGCATGGCGTGTGCCCGGGCTaGGAGGAGAAGATGCCCGGT +
Preference number: 4 (lower is better)
Translates to: YASCESYAKSLFFRPGRHGVCPG*EEKMPG
Trigger: ACCGGGCATCTTCTCCTCCCAGCCCGGGCACACGCC...ATGCCTCCCTGGCCTGAAGAAGAGACTCTTTGCATATGACTCACATGATGCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGATGGGACTGTCTGGCGTGTGCCCGGGCTaGGAGGAGAAGATGCCCGGT +
Preference number: 4 (lower is better)
Translates to: AWQLVVGFPKTGVLMGLSGVCPG*EEKMPG
Trigger: ACCGGGCATCTTCTCCTCCCAGCCCGGGCACACGCC...AGACAGTCCCATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CCA 90 bp TTGCCCAGGGACGAGGAAACCTTCAAGAAACAAGGTCAAAGGGACAACAGATATCAGGTGGACCACAGGTaGCACCGGGCTGAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: LPRDEETFKKQGQRDNRYQVDHR*HRAERR
Trigger: CCTGCGCTCAGCCCGGTGCCACCTGTGGTCCACCTG...ATATCTGTTGTCCCTTTGACCTTGTTTCTTGAAGGTTTCCTCGTCCCTGGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CCGTCTGCTCTTCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTGGCGTCAGGTGCAGCTaGCTGGACATCTCGGCGAAG +
Preference number: 4 (lower is better)
Translates to: PSALQMVIRPTTWKANLCGVRCS*LDISAK
Trigger: CTTCGCCGAGATGTCCAGCCAGCTGCACCTGACGCC...ACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGAAGAGCAGACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GTCTTCTGGGACAATCTATCAGAGGCTGATCATTCCAAGGACCTGATTTATCCAGCTCCTCCACCACCGTaGCAAAGCGTCCCCGCGCGG +
Preference number: 4 (lower is better)
Translates to: VFWDNLSEADHSKDLIYPAPPPP*QSVPAR
Trigger: CCGCGCGGGGACGCTTTGCCACGGTGGTGGAGGAGC...TGGATAAATCAGGTCCTTGGAATGATCAGCCTCTGATAGATTGTCCCAGAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR CCA 90 bp ATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGGTGCTTGGCAACAGCCTCCGTTATCCTaGATCCAGGTGTGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: MFTGTEHPGGATRSGAWQQPPLS*IQVCRC
Trigger: GCACCTGCACACCTGGATCCAGGATAACGGAGGCTG...TTGCCAAGCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GTGATACATGTCTTAAGAAGGGTCGTGGCTCCCATGCTCCACGTGAAAACGGGCGGCGGCCTGATGCTCTaGGTAACTCTAGCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: VIHVLRRVVAPMLHVKTGGGLML*VTLAFL
Trigger: CAGGAAGGCTAGAGTTACCCAGAGCATCAGGCCGCC...GCCCGTTTTCACGTGGAGCATGGGAGCCACGACCCTTCTTAAGACATGTATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp AGAACATCCAGGTGGAGCCACACGAAGCGGTGCTTGGCAATTAGTGGTCGGATTAGCCAAAATGGGCCGTaGCCATTGCCTCTCCTCACG +
Preference number: 4 (lower is better)
Translates to: RTSRWSHTKRCLAISGRISQNGP*PLPLLT
Trigger: CGTGAGGAGAGGCAATGGCCACGGCCCATTTTGGCT...AATCCGACCACTAATTGCCAAGCACCGCTTCGTGTGGCTCCACCTGGATGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CCCAGGGCCTCTGTTCCTTCCCTCTACAGTGATACATGTCTTAAGAAGGGTCGTCCCGCCGGGGAGGTCTaGCTTCATACCACAGGTTTC +
Preference number: 4 (lower is better)
Translates to: PRASVPSLYSDTCLKKGRPAGEV*LHTTGF
Trigger: GAAACCTGTGGTATGAAGCCAGACCTCCCCGGCGGG...ACGACCCTTCTTAAGACATGTATCACTGTAGAGGGAAGGAACAGAGGCCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CCCAGGGACGAGGAAACCTTCAAGAAACAAGGTCAAAGGGACAACAGATATAACCCTTTCTCCTCCTCCTaGTCCTGCGCGGCGGCGCTG +
Preference number: 4 (lower is better)
Translates to: PRDEETFKKQGQRDNRYNPFSSS*SCAAAL
Trigger: CAGCGCCGCCGCGCAGGACCAGGAGGAGGAGAAAGG...GTTATATCTGTTGTCCCTTTGACCTTGTTTCTTGAAGGTTTCCTCGTCCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398117.1
CDS-3UTR CCA 90 bp GAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGGTGCTCGCATCTCGGACCTGTaGCCTCAGCCCAGACTCACA +
Preference number: 4 (lower is better)
Translates to: ESMFTGTEHPGGATRSGARISDL*PQPRLT
Trigger: TGTGAGTCTGGGCTGAGGCCACAGGTCCGAGATGCG...AGCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678349.1
CDS-3UTR TCA 90 bp TCTAAAGCAGCTTGGAGGATCTTACCACGTGGAGCATACTGCAAACTGACTCCAGCGCGGGCACAGGCATaGATCTCTATCCACGGGACC +
Preference number: 4 (lower is better)
Translates to: SKAAWRILPRGAYCKLTPARAQA*ISIHGT
Trigger: GGTCCCGTGGATAGAGATTCATGCCTGTGCCCGCGC...TGGAGTCAGTTTGCAGTATGCTCCACGTGGTAAGATCCTCCAAGCTGCTTTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333681.5
ENST00000398117.1
CDS-3UTR TCA 90 bp CTGCCAAATCTTCGGAGACGACCCGATGGCCATAGACCCTGTCAGCTGTCATTCCTGCTCTTCAGATGGTaGTCCGGCCAACAACATGGA +
Preference number: 4 (lower is better)
Translates to: LPNLRRRPDGHRPCQLSFLLFRW*SGQQHG
Trigger: TCCATGTTGTTGGCCGGATCACCATCTGAAGAGCAG...GAATGACAGCTGACAGGGTCTATGGCCATCGGGTCGTCTCCGAAGATTTGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp CATCCGTCTGCTCTTCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTAACCACACTGCCCTGTTaGTCATCCCTGGAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: HPSALQMVIRPTTWKANLTTLPC*SSLEEA
Trigger: GGCCTCCTCCAGGGATGATCAACAGGGCAGTGTGGT...TAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGAAGAGCAGACGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp AATGGGCCGTGGCCATTGCCTCTCCTCACGTTCCCAGCCTTCACCATGTCCTTCTTGACAGTGGAATTCTaGGCTCCATCAGCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: NGPWPLPLLTFPAFTMSFLTVEF*APSASR
Trigger: TCTGGAAGCTGATGGAGCTCAGAATTCCACTGTCAA...GAAGGACATGGTGAAGGCTGGGAACGTGAGGAGAGGCAATGGCCACGGCCCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp ACTCTGATTTTATTTCGCCGGCTCCACAGCCTCCCATTGCCCCAGGAGCCCACCCAGCTTGAGAAACACTaGAGGGGTACCATTTACCAC +
Preference number: 4 (lower is better)
Translates to: TLILFRRLHSLPLPQEPTQLEKH*RGTIYH
Trigger: GTGGTAAATGGTACCCCTTCAGTGTTTCTCAAGCTG...GGTGGGCTCCTGGGGCAATGGGAGGCTGTGGAGCCGGCGAAATAAAATCAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000589955.2
ENST00000678349.1
CDS-3UTR GCA 90 bp GATTTAAGGGCATTTTTCCCATCGCTGTCCTTCGGCGTGGAAATCTCAGTGGGTCCTGTTCTCCCAGCGTaGGCCATCCTTCCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: DLRAFFPSLSFGVEISVGPVLPA*AILPRG
Trigger: TCCTCTGGGAAGGATGGCGCACGCTGGGAGAACAGG...ACCCACTGAGATTTCCACGCCGAAGGACAGCGATGGGAAAAATGCCCTTAAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333681.5
ENST00000398117.1
CDS-3UTR GCA 90 bp CCCACGGCAGATTTTCCAAAAGGTTTAGGTGCATGGATTTACTCAGTATCTACAGACCGGGTCCCGGGATaGGGCTGGATGGGGCGTGTG +
Preference number: 4 (lower is better)
Translates to: PTADFPKGLGAWIYSVSTDRVPG*GWMGRV
Trigger: CACACGCCCCATCCAGCCGCATCCCGGGACCCGGTC...TGTAGATACTGAGTAAATCCATGCACCTAAACCTTTTGGAAAATCTGCCGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR GCA 90 bp AAGGTTCTTCGCAGAGGCATCACATCGACCCCAATACAGGTCCTTCATACCCTTGTGAAGGGCGTCAGGTaGAGCTGGCTGGACATCTCG +
Preference number: 4 (lower is better)
Translates to: KVLRRGITSTPIQVLHTLVKGVR*SWLDIS
Trigger: CGAGATGTCCAGCCAGCTGCACCTGACGCCCTTCAC...AAGGGTATGAAGGACCTGTATTGGGGTCGATGTGATGCCTCTGCGAAGAACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR GCA 90 bp TGGGTACTAGGTCCATCTGAAGTTCCCAACTCTTTTCCTCCCACCAGGTATGCAGTGAAGGGCGTCAGGTaGAGCTGGCTGGACATCTCG +
Preference number: 4 (lower is better)
Translates to: WVLGPSEVPNSFPPTRYAVKGVR*SWLDIS
Trigger: CGAGATGTCCAGCCAGCTGCACCTGACGCCCTTCAC...TGCATACCTGGTGGGAGGAAAAGAGTTGGGAACTTCAGATGGACCTAGTACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR GCA 90 bp GATTTAAGGGCATTTTTCCCATCGCTGTCCTTCGGCGTGGAAATCTCAGTGGGTGTGAAGGGCGTCAGGTaGAGCTGGCTGGACATCTCG +
Preference number: 4 (lower is better)
Translates to: DLRAFFPSLSFGVEISVGVKGVR*SWLDIS
Trigger: CGAGATGTCCAGCCAGCTGCACCTGACGCCCTTCAC...ACCCACTGAGATTTCCACGCCGAAGGACAGCGATGGGAAAAATGCCCTTAAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR GCA 90 bp GTGATACATGTCTTAAGAAGGGTCGTGGCTCCCATGCTCCACGTGAAAACGGGCATCCAGGTGTGCAGGTaGCGGTTCAGGTACTCAGTC +
Preference number: 4 (lower is better)
Translates to: VIHVLRRVVAPMLHVKTGIQVCR*RFRYSV
Trigger: GACTGAGTACCTGAACCGGCACCTGCACACCTGGAT...GCCCGTTTTCACGTGGAGCATGGGAGCCACGACCCTTCTTAAGACATGTATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR GCA 90 bp ATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGGTGCTTGCAAACAGAGGCCGCATaGTGGGGCCGTACAGTTCCA +
Preference number: 4 (lower is better)
Translates to: IYVYRHRTSRWSHTKRCLQTEAA*WGRTVP
Trigger: TGGAACTGTACGGCCCCAGCATGCGGCCTCTGTTTG...CAAGCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp GGCCATAGACCCTGTCAGCTGTCATTCTGGCCTCTCTTGCGGAGTATTTGTGCAAGCCAACGTGCCATGTaGTACAGCCAAAATGGGCCG +
Preference number: 4 (lower is better)
Translates to: GHRPCQLSFWPLLRSICASQRAM*YSQNGP
Trigger: CGGCCCATTTTGGCTGTAGCACATGGCACGTTGGCT...TGCACAAATACTCCGCAAGAGAGGCCAGAATGACAGCTGACAGGGTCTATGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp GTCAGCTGTCATTCTGGCCTCTCTTGCGGAGTATTTGTGCAGCGAGGGACTGGGACTGCCAAACGGAGCTaGACTTTGAGCCATGCTGAT +
Preference number: 4 (lower is better)
Translates to: VSCHSGLSCGVFVQRGTGTAKRS*TLSHAD
Trigger: ATCAGCATGGCTCAAAGTGCAGCTCCGTTTGGCAGT...CCCAGTCCCTCGCTGCACAAATACTCCGCAAGAGAGGCCAGAATGACAGCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp AATGGGCCGTGGCCATTGCCTCTCCTCACGTTCCCAGCCTTCACCATGTCCTTCCTGGTGTTTCCCCCTTaGCATGAGATGCAGGAAATT +
Preference number: 4 (lower is better)
Translates to: NGPWPLPLLTFPAFTMSFLVFPP*HEMQEI
Trigger: AATTTCCTGCATCTCATGCCAAGGGGGAAACACCAG...GAAGGACATGGTGAAGGCTGGGAACGTGAGGAGAGGCAATGGCCACGGCCCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333681.5
ENST00000398117.1
CDS-3UTR CCA 90 bp GTCTTCTGGGACAATCTATCAGAGGCTGATCATTCCAAGGACCTGATTTATCCAGGCGTGTGCCCGGGCTaGGAGGAGAAGATGCCCGGT +
Preference number: 4 (lower is better)
Translates to: VFWDNLSEADHSKDLIYPGVCPG*EEKMPG
Trigger: ACCGGGCATCTTCTCCTCCCAGCCCGGGCACACGCC...TGGATAAATCAGGTCCTTGGAATGATCAGCCTCTGATAGATTGTCCCAGAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR CCA 90 bp CCAGAAACAATCACACCACAGCACATGACTGAAAACTCTATGAGAAATAGTGTGGTCCCGGGATGCGGCTaGATGGGGCGTGTGCCCGGG +
Preference number: 4 (lower is better)
Translates to: PETITPQHMTENSMRNSVVPGCG*MGRVPG
Trigger: CCCGGGCACACGCCCCATCCAGCCGCATCCCGGGAC...CACACTATTTCTCATAGAGTTTTCAGTCATGTGCTGTGGTGTGATTGTTTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR CCA 90 bp CCAGAAACAATCACACCACAGCACATGACTGAAAACTCTATGAGAAATAGTGTGGCAGCGGCGAGGTCCTaGCGACCGGGTCCCGGGATG +
Preference number: 4 (lower is better)
Translates to: PETITPQHMTENSMRNSVAAARS*RPGPGM
Trigger: CATCCCGGGACCCGGTCGCCAGGACCTCGCCGCTGC...CACACTATTTCTCATAGAGTTTTCAGTCATGTGCTGTGGTGTGATTGTTTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR CCA 90 bp GTCTTCTGGGACAATCTATCAGAGGCTGATCATTCCAAGGACCTGATTTATCCATGGCGGAGGGTCAGGTaGACCACAGGTGGCACCGGG +
Preference number: 4 (lower is better)
Translates to: VFWDNLSEADHSKDLIYPWRRVR*TTGGTG
Trigger: CCCGGTGCCACCTGTGGTCCACCTGACCCTCCGCCA...TGGATAAATCAGGTCCTTGGAATGATCAGCCTCTGATAGATTGTCCCAGAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR CCA 90 bp TTCATTGTTACTTCTAAAGCAGCTTGGAGGATCTTACCACGTGGAGCATACTGCAAGTCGTCGCCGGCCTaGCGGAGGGTCAGGTGGACC +
Preference number: 4 (lower is better)
Translates to: FIVTSKAAWRILPRGAYCKSSPA*RRVRWT
Trigger: GGTCCACCTGACCCTCCGCCAGGCCGGCGACGACTT...GCAGTATGCTCCACGTGGTAAGATCCTCCAAGCTGCTTTAGAAGTAACAATGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GCCACACGAAGCGGTGCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTCAGCCTCCGTTATCCTaGATCCAGGTGTGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: ATRSGAWQLVVGFPKTGVQPPLS*IQVCRC
Trigger: GCACCTGCACACCTGGATCCAGGATAACGGAGGCTG...AACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACCGCTTCGTGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGGTGCTCAGCCTCCGTTATCCTaGATCCAGGTGTGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: ESMFTGTEHPGGATRSGAQPPLS*IQVCRC
Trigger: GCACCTGCACACCTGGATCCAGGATAACGGAGGCTG...AGCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GTCTGGCTTCATACCACAGGTTTCCTGCTTTCTTGGTGGAGCGTAAGCACCACTACAGAGGCCGCATGCTaGGGCCGTACAGTTCCACAA +
Preference number: 4 (lower is better)
Translates to: VWLHTTGFLLSWWSVSTTTEAAC*GRTVPQ
Trigger: TTGTGGAACTGTACGGCCCCAGCATGCGGCCTCTGT...AGTGGTGCTTACGCTCCACCAAGAAAGCAGGAAACCTGTGGTATGAAGCCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CCCACAGGAACCCTCCCTCTGTTAATATCACAGCCCCCAGGGCAAAGAAATGCAGTGCTACAGCCAAAATaGGCCGTGGCCATTGCCTCT +
Preference number: 4 (lower is better)
Translates to: PTGTLPLLISQPPGQRNAVLQPK*AVAIAS
Trigger: AGAGGCAATGGCCACGGCCCATTTTGGCTGTAGCAC...TGCATTTCTTTGCCCTGGGGGCTGTGATATTAACAGAGGGAGGGTTCCTGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp ACAGCCAAAATGGGCCGTGGCCATTGCCTCTCCTCACGTTCCCAGCCTTCACCAGAGGATCTTACCACGTaGAGCATACTGCAAACTGAC +
Preference number: 4 (lower is better)
Translates to: TAKMGRGHCLSSRSQPSPEDLTT*SILQTD
Trigger: GTCAGTTTGCAGTATGCTCCACGTGGTAAGATCCTC...TGGTGAAGGCTGGGAACGTGAGGAGAGGCAATGGCCACGGCCCATTTTGGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR CAA 72 bp GGAAACGGTGGTCCTGGGGACTCCTGGACCTTCAGCTaGAGAAACACTGAAGGGGTACCATTTACCACCACA +
Preference number: 4 (lower is better)
Translates to: GNGGPGDSWTFS*RNTEGVPFTTT
Trigger: TGTGGTGGTAAATGGTACCCCTTCAGTGTTTCTCAAGCTGAAGGTCCAGGAGTCCCCAGGACCACCGTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589955.2
ENST00000678349.1
CDS-3UTR TCA 90 bp TGGGTACTAGGTCCATCTGAAGTTCCCAACTCTTTTCCTCCCACCAGGTATGCAAAGCTGCTGGATAAATaGAGGCAGGACGCGCCTGGC +
Preference number: 4 (lower is better)
Translates to: WVLGPSEVPNSFPPTRYAKLLDK*RQDAPG
Trigger: GCCAGGCGCGTCCTGCCTTCATTTATCCAGCAGCTT...TGCATACCTGGTGGGAGGAAAAGAGTTGGGAACTTCAGATGGACCTAGTACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333681.5
ENST00000398117.1
CDS-3UTR TCA 90 bp GCCACACAGCCAACGTGCCATGTGCTACAGCCAAAATGGGCCGTGGCCATTGCCGTTTCCCCCTTGGCATaGGATGCAGGAAATTTTTAT +
Preference number: 4 (lower is better)
Translates to: ATQPTCHVLQPKWAVAIAVSPLA*DAGNFY
Trigger: ATAAAAATTTCCTGCATCTCATGCCAAGGGGGAAAC...GGCAATGGCCACGGCCCATTTTGGCTGTAGCACATGGCACGTTGGCTGTGTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000333681.5
ENST00000398117.1
CDS-3UTR TCA 90 bp AAACATGCATGTAATCCTGAATACCATGAATTAAATGCGGAATTGCCCAGGGACAGCGTCCCCGCGCGGTaGAGGGCGTCAGGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: KHACNPEYHELNAELPRDSVPAR*RASGAA
Trigger: AGCTGCACCTGACGCCCTTCACCGCGCGGGGACGCT...GTCCCTGGGCAATTCCGCATTTAATTCATGGTATTCAGGATTACATGCATGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR TCA 90 bp GCCACACGAAGCGGTGCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTCCACCAGGGCCAAACTaGGCAGAGTCTTCAGAGACA +
Preference number: 4 (lower is better)
Translates to: ATRSGAWQLVVGFPKTGVPPGPN*AESSET
Trigger: TGTCTCTGAAGACTCTGCTCAGTTTGGCCCTGGTGG...AACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACCGCTTCGTGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp GCAACATCAACTACTCTTAGAGCAAGTGCAGCCACAATACTGTACAGTTCTGGGGATAGGCACCCAGGGTaGTGCAAGCTCCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: ATSTTLRASAATILYSSGDRHPG*CKLPPG
Trigger: CCCTGGTGGGAGCTTGCATCACCCTGGGTGCCTATC...CCCAGAACTGTACAGTATTGTGGCTGCACTTGCTCTAAGAGTAGTTGATGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp AACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCGATAGGCACCCAGGGTaGTGCAAGCTCCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: NNMESESMFTGTEHPGGADRHPG*CKLPPG
Trigger: CCCTGGTGGGAGCTTGCATCACCCTGGGTGCCTATC...GGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp AGAACATCCAGGTGGAGCCACACGAAGCGGTGCTTGGCAATTAGTGGTCGGATTCTGCTCTTCAGATGGTaGTCCGGCCAACAACATGGA +
Preference number: 4 (lower is better)
Translates to: RTSRWSHTKRCLAISGRILLFRW*SGQQHG
Trigger: TCCATGTTGTTGGCCGGATCACCATCTGAAGAGCAG...AATCCGACCACTAATTGCCAAGCACCGCTTCGTGTGGCTCCACCTGGATGTTCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp CCCACAGGAACCCTCCCTCTGTTAATATCACAGCCCCCAGGGCAAAGAAATGCATGGGTGGGTCTGTGTTaGAACAGGCCACGTAAAGCA +
Preference number: 4 (lower is better)
Translates to: PTGTLPLLISQPPGQRNAWVGLC*NRPRKA
Trigger: TGCTTTACGTGGCCTGTTTCAACACAGACCCACCCA...TGCATTTCTTTGCCCTGGGGGCTGTGATATTAACAGAGGGAGGGTTCCTGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp TTCCTGATGCGGAAGTCACCGAAATGTTCACTTCCTCAAGTTCCAGAGGATTCTCCTGAAGGACAGCCATaGGAAAGCCCCCGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: FLMRKSPKCSLPQVPEDSPEGQP*ESPRGR
Trigger: CCTTCCGCGGGGGCTTTCTCATGGCTGTCCTTCAGG...AGAATCCTCTGGAACTTGAGGAAGTGAACATTTCGGTGACTTCCGCATCAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp TTGCCCAGGGACGAGGAAACCTTCAAGAAACAAGGTCAAAGGGACAACAGATATGATCATTCTGTTCCCTaGGGCCCGCCGGGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: LPRDEETFKKQGQRDNRYDHSVP*GPPGRS
Trigger: AGACCTCCCCGGCGGGCCTCAGGGAACAGAATGATC...ATATCTGTTGTCCCTTTGACCTTGTTTCTTGAAGGTTTCCTCGTCCCTGGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp GTTTCTCATTTGTCACACAAGGTTCTTCGCAGAGGCATCACATCGACCCCAATAGATCATTCTGTTCCCTaGGGCCCGCCGGGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: VSHLSHKVLRRGITSTPIDHSVP*GPPGRS
Trigger: AGACCTCCCCGGCGGGCCTCAGGGAACAGAATGATC...TATTGGGGTCGATGTGATGCCTCTGCGAAGAACCTTGTGTGACAAATGAGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp CTGATGCGGAAGTCACCGAAATGTTCACTTCCTCAAGTTCCAGAGGATTCTGTTGATCATTCTGTTCCCTaGGGCCCGCCGGGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: LMRKSPKCSLPQVPEDSVDHSVP*GPPGRS
Trigger: AGACCTCCCCGGCGGGCCTCAGGGAACAGAATGATC...AACAGAATCCTCTGGAACTTGAGGAAGTGAACATTTCGGTGACTTCCGCATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp TCCTCACGTTCCCAGCCTTCACCATGTCCTTCTGATAGGAAGGGCCCAGGGCCTCAGAATTTTCTTGATTaGGCGAGCCTTTCCATCCTC +
Preference number: 4 (lower is better)
Translates to: SSRSQPSPCPSDRKGPGPQNFLD*ASLSIL
Trigger: GAGGATGGAAAGGCTCGCTCAATCAAGAAAATTCTG...AGGCCCTGGGCCCTTCCTATCAGAAGGACATGGTGAAGGCTGGGAACGTGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp ATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGGTGCTTGGCAACTGTTGAACAGATCCTaGGTTTCTGTCCAGCCTCCG +
Preference number: 4 (lower is better)
Translates to: MFTGTEHPGGATRSGAWQLLNRS*VSVQPP
Trigger: CGGAGGCTGGACAGAAACTCAGGATCTGTTCAACAG...TTGCCAAGCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677227.1
CDS-3UTR GCA 90 bp CCCACGGCAGATTTTCCAAAAGGTTTAGGTGCATGGATTTACTCAGTATCTACAGCTGGATGGGGCGTGTaGCCGGGCTGGGAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: PTADFPKGLGAWIYSVSTAGWGV*PGWEEK
Trigger: CTTCTCCTCCCAGCCCGGGCACACGCCCCATCCAGC...TGTAGATACTGAGTAAATCCATGCACCTAAACCTTTTGGAAAATCTGCCGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR GCA 90 bp GGTCCATCTGAAGTTCCCAACTCTTTTCCTCCCACCAGGTATGCATCATGTGAGTCCTGGATCCAGGTGTaGAGGTGCCGGTTCAGGTAC +
Preference number: 4 (lower is better)
Translates to: GPSEVPNSFPPTRYASCESWIQV*RCRFRY
Trigger: GTACCTGAACCGGCACCTGCACACCTGGATCCAGGA...CTCACATGATGCATACCTGGTGGGAGGAAAAGAGTTGGGAACTTCAGATGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR GCA 90 bp CCACCAGTGTTCCCATCTTCTGTGCTCAGCTTGGTATGCAGAACAACCTTGTTGCAAACAGAGGCCGCATaGTGGGGCCGTACAGTTCCA +
Preference number: 4 (lower is better)
Translates to: PPVFPSSVLSLVCRTTLLQTEAA*WGRTVP
Trigger: TGGAACTGTACGGCCCCAGCATGCGGCCTCTGTTTG...CAACAAGGTTGTTCTGCATACCAAGCTGAGCACAGAAGATGGGAACACTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp GTGATACATGTCTTAAGAAGGGTCGTGGCTCCCATGCTCCACGTGAAAACGGGCATTCGGAGACCACACTaGCCTGTTGATCATCCCTGG +
Preference number: 4 (lower is better)
Translates to: VIHVLRRVVAPMLHVKTGIRRPH*PVDHPW
Trigger: CCAGGGATGATCAACAGGGCAGTGTGGTCTCCGAAT...GCCCGTTTTCACGTGGAGCATGGGAGCCACGACCCTTCTTAAGACATGTATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp TGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGGTGCTTGGCAATATTCGGAGACCACACTaGCCTGTTGATCATCCCTGG +
Preference number: 4 (lower is better)
Translates to: CLQAQNIQVEPHEAVLGNIRRPH*PVDHPW
Trigger: CCAGGGATGATCAACAGGGCAGTGTGGTCTCCGAAT...ATTGCCAAGCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp ACAGCCAAAATGGGCCGTGGCCATTGCCTCTCCTCACGTTCCCAGCCTTCACCAGTGCTCAGCTTGGTATaGAGAACAACCTTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: TAKMGRGHCLSSRSQPSPVLSLV*RTTLLL
Trigger: CAACAACAAGGTTGTTCTGCATACCAAGCTGAGCAC...TGGTGAAGGCTGGGAACGTGAGGAGAGGCAATGGCCACGGCCCATTTTGGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp CCCGCCGGGGAGGTCTGGCTTCATACCACAGGTTTCCTGCTTTCTTGGTGGAGCCTTCCCCAAAAGAAATaGAATCCACTGTCACTCTTG +
Preference number: 4 (lower is better)
Translates to: PAGEVWLHTTGFLLSWWSLPQKK*NPLSLL
Trigger: CAAGAGTGACAGTGGATTGCATTTCTTTTGGGGAAG...GCTCCACCAAGAAAGCAGGAAACCTGTGGTATGAAGCCAGACCTCCCCGGCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp TGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAACACACGGGAAACCAGTaGGCCTGTCCACGGCACAGA +
Preference number: 4 (lower is better)
Translates to: WKANLCLQAQNIQVEPHEHTGNQ*ACPRHR
Trigger: TCTGTGCCGTGGACAGGCGCACTGGTTTCCCGTGTG...TTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678134.1
CDS-3UTR CCA 90 bp ACAGCCTGCAGCTTTGTTTCATGGTACATCACTGACAATGCATATTATTTCTACCGGGATGCGGCTGGATaGGGCGTGTGCCCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: TACSFVSWYITDNAYYFYRDAAG*GVCPGW
Trigger: CCAGCCCGGGCACACGCCCCATCCAGCCGCATCCCG...GTAGAAATAATATGCATTGTCAGTGATGTACCATGAAACAAAGCTGCAGGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CAAGTTCCAGAGGATTCTGTTTCTTACTCAGACAGAGCCAGTATTGGGAGTTGGGGCGTCAGGTGCAGCTaGCTGGACATCTCGGCGAAG +
Preference number: 4 (lower is better)
Translates to: QVPEDSVSYSDRASIGSWGVRCS*LDISAK
Trigger: CTTCGCCGAGATGTCCAGCCAGCTGCACCTGACGCC...CCAACTCCCAATACTGGCTCTGTCTGAGTAAGAAACAGAATCCTCTGGAACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CCTCCCACCAGGTATGCATCATGTGAGTCATATGCAAAGAGTCTCTTCTTCAGGCCTGTTGATCATCCCTaGAGGAGGCCAGTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: PPTRYASCESYAKSLFFRPVDHP*RRPVRA
Trigger: GGCCCTCACTGGCCTCCTCCAGGGATGATCAACAGG...CCTGAAGAAGAGACTCTTTGCATATGACTCACATGATGCATACCTGGTGGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACCCTGTTGATCATCCCTaGAGGAGGCCAGTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: QHGKRIYVYRHRTSRWSHPVDHP*RRPVRA
Trigger: GGCCCTCACTGGCCTCCTCCAGGGATGATCAACAGG...GTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CATCCGTCTGCTCTTCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTAAGCCAAAATGGGCCGTaGCCATTGCCTCTCCTCACG +
Preference number: 4 (lower is better)
Translates to: HPSALQMVIRPTTWKANLSQNGP*PLPLLT
Trigger: CGTGAGGAGAGGCAATGGCCACGGCCCATTTTGGCT...TAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGAAGAGCAGACGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp TATGCATCATGTGAGTCATATGCAAAGAGTCTCTTCTTCAGGCCAGGGAGGCATTGTGCAGCGAGGGACTaGGAGGGCCGAGGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: YASCESYAKSLFFRPGRHCAARD*EGRGGS
Trigger: AGAACCTCCTCGGCCCTCCCAGTCCCTCGCTGCACA...ATGCCTCCCTGGCCTGAAGAAGAGACTCTTTGCATATGACTCACATGATGCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CTTCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCATGTGCAGCGAGGGACTaGGAGGGCCGAGGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: LQMVIRPTTWKANLCLQACAARD*EGRGGS
Trigger: AGAACCTCCTCGGCCCTCCCAGTCCCTCGCTGCACA...TGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CCCAGGGCCTCTGTTCCTTCCCTCTACAGTGATACATGTCTTAAGAAGGGTCGTGGTCCTGGGGACTCCTaGACCTTCAGCTTGAGAAAC +
Preference number: 4 (lower is better)
Translates to: PRASVPSLYSDTCLKKGRGPGDS*TFSLRN
Trigger: GTTTCTCAAGCTGAAGGTCCAGGAGTCCCCAGGACC...ACGACCCTTCTTAAGACATGTATCACTGTAGAGGGAAGGAACAGAGGCCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678349.1
3UTR CAA 72 bp CACAGAACATCCAGGTGGAGCCACACGAAGCGGTGCTaGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGT +
Preference number: 4 (lower is better)
Translates to: HRTSRWSHTKRC*AISGRISKDRS
Trigger: ACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp TATGGAACACAAAAGTCAAACAGATTTCCTCAGCCTCACAAGGTTCCAATTTTCAGCGTCCCCGCGCGGTaGAGGGCGTCAGGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: YGTQKSNRFPQPHKVPIFSVPAR*RASGAA
Trigger: AGCTGCACCTGACGCCCTTCACCGCGCGGGGACGCT...GAAAATTGGAACCTTGTGAGGCTGAGGAAATCTGTTTGACTTTTGTGTTCCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR TCA 90 bp CTCTGGGTAACTCTAGCCTTCCTGATGCGGAAGTCACCGAAATGTTCACTTCCTCCACCAGGGCCAAACTaGGCAGAGTCTTCAGAGACA +
Preference number: 4 (lower is better)
Translates to: LWVTLAFLMRKSPKCSLPPPGPN*AESSET
Trigger: TGTCTCTGAAGACTCTGCTCAGTTTGGCCCTGGTGG...AGGAAGTGAACATTTCGGTGACTTCCGCATCAGGAAGGCTAGAGTTACCCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp TTTAAGGGCATTTTTCCCATCGCTGTCCTTCGGCGTGGAAATCTCAGTGGGTACCCACCAGGGCCAAACTaGGCAGAGTCTTCAGAGACA +
Preference number: 4 (lower is better)
Translates to: FKGIFPIAVLRRGNLSGYPPGPN*AESSET
Trigger: TGTCTCTGAAGACTCTGCTCAGTTTGGCCCTGGTGG...GTACCCACTGAGATTTCCACGCCGAAGGACAGCGATGGGAAAAATGCCCTTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp AATGGGCCGTGGCCATTGCCTCTCCTCACGTTCCCAGCCTTCACCATGTCCTTCCAGGTATGCATCATGTaGGTCATATGCAAAGAGTCT +
Preference number: 4 (lower is better)
Translates to: NGPWPLPLLTFPAFTMSFQVCIM*VICKES
Trigger: AGACTCTTTGCATATGACTCACATGATGCATACCTG...GAAGGACATGGTGAAGGCTGGGAACGTGAGGAGAGGCAATGGCCACGGCCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp CAAGTTCCAGAGGATTCTGTTTCTTACTCAGACAGAGCCAGTATTGGGAGTTGGACCACACTGCCCTGTTaGTCATCCCTGGAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: QVPEDSVSYSDRASIGSWTTLPC*SSLEEA
Trigger: GGCCTCCTCCAGGGATGATCAACAGGGCAGTGTGGT...CCAACTCCCAATACTGGCTCTGTCTGAGTAAGAAACAGAATCCTCTGGAACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp GTTTCTCATTTGTCACACAAGGTTCTTCGCAGAGGCATCACATCGACCCCAATAACCACACTGCCCTGTTaGTCATCCCTGGAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: VSHLSHKVLRRGITSTPITTLPC*SSLEEA
Trigger: GGCCTCCTCCAGGGATGATCAACAGGGCAGTGTGGT...TATTGGGGTCGATGTGATGCCTCTGCGAAGAACCTTGTGTGACAAATGAGAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp TGCAGCGAGGGACTGGGAGGGCCGAGGAGGTTCTCAGATGTTCTTCTCCTTTTGAATAGATCCTGGAGGTaGAAGCTAGACATGTGTTGG +
Preference number: 4 (lower is better)
Translates to: CSEGLGGPRRFSDVLLLLNRSWR*KLDMCW
Trigger: CCAACACATGTCTAGCTTTCACCTCCAGGATCTATT...CAAAAGGAGAAGAACATCTGAGAACCTCCTCGGCCCTCCCAGTCCCTCGCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp GCCACACGAAGCGGTGCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTAACGGAGCTGCACTTTaGGCCATGCTGATGTCTCTG +
Preference number: 4 (lower is better)
Translates to: ATRSGAWQLVVGFPKTGVNGAAL*AMLMSL
Trigger: CAGAGACATCAGCATGGCTCAAAGTGCAGCTCCGTT...AACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACCGCTTCGTGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp CCCACAGGAACCCTCCCTCTGTTAATATCACAGCCCCCAGGGCAAAGAAATGCAAGGATGTTTGGGGAGTaGGGAAGTAATAGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: PTGTLPLLISQPPGQRNARMFGE*GSNRGV
Trigger: CACTCCCCTATTACTTCCTCACTCCCCAAACATCCT...TGCATTTCTTTGCCCTGGGGGCTGTGATATTAACAGAGGGAGGGTTCCTGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000678301.1
CDS-3UTR TCA 90 bp CCTCCCACCAGGTATGCATCATGTGAGTCATATGCAAAGAGTCTCTTCTTCAGGAATCCCAAAGAGAACTaGGCTCCAGAAGGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: PPTRYASCESYAKSLFFRNPKEN*APEGAG
Trigger: CCCCGCCCCTTCTGGAGCTCAGTTCTCTTTGGGATT...CCTGAAGAAGAGACTCTTTGCATATGACTCACATGATGCATACCTGGTGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678134.1
CDS-3UTR GCA 90 bp TCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACACCTGTTCTCCCAGCGTaGGCCATCCTTCCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: SDGDPANNMESESMFTGTPVLPA*AILPRG
Trigger: TCCTCTGGGAAGGATGGCGCACGCTGGGAGAACAGG...TGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333681.5
ENST00000398117.1
CDS-3UTR GCA 90 bp GGAACATGGCACACACTGGAGATTCCAGTCCAAGGACTTTGGAATGTCAACTTACCTGTTCTCCCAGCGTaGGCCATCCTTCCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: GTWHTLEIPVQGLWNVNLPVLPA*AILPRG
Trigger: TCCTCTGGGAAGGATGGCGCACGCTGGGAGAACAGG...TAAGTTGACATTCCAAAGTCCTTGGACTGGAATCTCCAGTGTGTGCCATGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR GCA 90 bp CCAGAAACAATCACACCACAGCACATGACTGAAAACTCTATGAGAAATAGTGTGGCTGGATGGGGCGTGTaGCCGGGCTGGGAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: PETITPQHMTENSMRNSVAGWGV*PGWEEK
Trigger: CTTCTCCTCCCAGCCCGGGCACACGCCCCATCCAGC...CACACTATTTCTCATAGAGTTTTCAGTCATGTGCTGTGGTGTGATTGTTTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR GCA 90 bp TATGGAACACAAAAGTCAAACAGATTTCCTCAGCCTCACAAGGTTCCAATTTTCGACCGGGTCCCGGGATaGGGCTGGATGGGGCGTGTG +
Preference number: 4 (lower is better)
Translates to: YGTQKSNRFPQPHKVPIFDRVPG*GWMGRV
Trigger: CACACGCCCCATCCAGCCGCATCCCGGGACCCGGTC...GAAAATTGGAACCTTGTGAGGCTGAGGAAATCTGTTTGACTTTTGTGTTCCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR GCA 90 bp GGGTGCGTATCCAAAATATATGAATATACACAATCAGGGCTTAAGGTACTGGATGACCGGGTCCCGGGATaGGGCTGGATGGGGCGTGTG +
Preference number: 4 (lower is better)
Translates to: GCVSKIYEYTQSGLKVLDDRVPG*GWMGRV
Trigger: CACACGCCCCATCCAGCCGCATCCCGGGACCCGGTC...ATCCAGTACCTTAAGCCCTGATTGTGTATATTCATATATTTTGGATACGCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR GCA 90 bp GAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCATCCAGGTGTGCAGGTaGCGGTTCAGGTACTCAGTC +
Preference number: 4 (lower is better)
Translates to: ESESMFTGTEHPGGATRSIQVCR*RFRYSV
Trigger: GACTGAGTACCTGAACCGGCACCTGCACACCTGGAT...GCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR GCA 90 bp GATTTAAGGGCATTTTTCCCATCGCTGTCCTTCGGCGTGGAAATCTCAGTGGGTATCCAGGTGTGCAGGTaGCGGTTCAGGTACTCAGTC +
Preference number: 4 (lower is better)
Translates to: DLRAFFPSLSFGVEISVGIQVCR*RFRYSV
Trigger: GACTGAGTACCTGAACCGGCACCTGCACACCTGGAT...ACCCACTGAGATTTCCACGCCGAAGGACAGCGATGGGAAAAATGCCCTTAAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR GCA 90 bp ACACGAAGCGGTGCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGCAAACAGAGGCCGCATaGTGGGGCCGTACAGTTCCA +
Preference number: 4 (lower is better)
Translates to: TRSGAWQLVVGFPKTGVLQTEAA*WGRTVP
Trigger: TGGAACTGTACGGCCCCAGCATGCGGCCTCTGTTTG...CAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACCGCTTCGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp GCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGATGGGACTGTCTATGGGCCGTGGCCATTaGCTCTCCTCACGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: AWQLVVGFPKTGVLMGLSMGRGH*LSSRSQ
Trigger: CTGGGAACGTGAGGAGAGGCAATGGCCACGGCCCAT...AGACAGTCCCATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp TCTTCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCATGGGCCGTGGCCATTaGCTCTCCTCACGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: SSDGDPANNMESESMFTGMGRGH*LSSRSQ
Trigger: CTGGGAACGTGAGGAGAGGCAATGGCCACGGCCCAT...GCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp TTGCCCAGGGACGAGGAAACCTTCAAGAAACAAGGTCAAAGGGACAACAGATATATGGGCCGTGGCCATTaGCTCTCCTCACGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: LPRDEETFKKQGQRDNRYMGRGH*LSSRSQ
Trigger: CTGGGAACGTGAGGAGAGGCAATGGCCACGGCCCAT...ATATCTGTTGTCCCTTTGACCTTGTTTCTTGAAGGTTTCCTCGTCCCTGGGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp CCGTCTGCTCTTCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTAGCCAACGTGCCATGTaGTACAGCCAAAATGGGCCG +
Preference number: 4 (lower is better)
Translates to: PSALQMVIRPTTWKANLCSQRAM*YSQNGP
Trigger: CGGCCCATTTTGGCTGTAGCACATGGCACGTTGGCT...ACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGAAGAGCAGACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp GAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGGTGCTGCCACACAGCCAACGTaGCATGTGCTACAGCCAAAA +
Preference number: 4 (lower is better)
Translates to: ESMFTGTEHPGGATRSGAATQPT*HVLQPK
Trigger: TTTTGGCTGTAGCACATGGCACGTTGGCTGTGTGGC...AGCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp GCCACACGAAGCGGTGCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTCCTGCCAGAGTTTTCTaGCCCTGCCAAATCTTCGGA +
Preference number: 4 (lower is better)
Translates to: ATRSGAWQLVVGFPKTGVPARVF*PCQIFG
Trigger: TCCGAAGATTTGGCAGGGGCAGAAAACTCTGGCAGG...AACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACCGCTTCGTGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp GTCAGCTGTCATTCTGGCCTCTCTTGCGGAGTATTTGTGCAGCGAGGGACTGGGGTGCTCAGCTTGGTATaGAGAACAACCTTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: VSCHSGLSCGVFVQRGTGVLSLV*RTTLLL
Trigger: CAACAACAAGGTTGTTCTGCATACCAAGCTGAGCAC...CCCAGTCCCTCGCTGCACAAATACTCCGCAAGAGAGGCCAGAATGACAGCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp CATCCGTCTGCTCTTCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTACCGGTTCCAACAAGCTaGTCAAGCCAGGAAACGGTG +
Preference number: 4 (lower is better)
Translates to: HPSALQMVIRPTTWKANLPVPTS*SSQETV
Trigger: CACCGTTTCCTGGCTTGAGCAGCTTGTTGGAACCGG...TAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGAAGAGCAGACGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678349.1
CDS-3UTR CCA 90 bp CCAGAAACAATCACACCACAGCACATGACTGAAAACTCTATGAGAAATAGTGTGCAGGTGGACCACAGGTaGCACCGGGCTGAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: PETITPQHMTENSMRNSVQVDHR*HRAERR
Trigger: CCTGCGCTCAGCCCGGTGCCACCTGTGGTCCACCTG...CACACTATTTCTCATAGAGTTTTCAGTCATGTGCTGTGGTGTGATTGTTTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR CCA 90 bp CCAGAAACAATCACACCACAGCACATGACTGAAAACTCTATGAGAAATAGTGTGAAGTCGTCGCCGGCCTaGCGGAGGGTCAGGTGGACC +
Preference number: 4 (lower is better)
Translates to: PETITPQHMTENSMRNSVKSSPA*RRVRWT
Trigger: GGTCCACCTGACCCTCCGCCAGGCCGGCGACGACTT...CACACTATTTCTCATAGAGTTTTCAGTCATGTGCTGTGGTGTGATTGTTTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR CCA 90 bp AACTCAATCCCTTGCCTGCAAGAGTCCCTTTGTCTTAAAGAAGCTGCAAGGTCATCAGGTGCAGCTGGCTaGACATCTCGGCGAAGTCGC +
Preference number: 4 (lower is better)
Translates to: NSIPCLQESLCLKEAARSSGAAG*TSRRSR
Trigger: GCGACTTCGCCGAGATGTCCAGCCAGCTGCACCTGA...TGACCTTGCAGCTTCTTTAAGACAAAGGGACTCTTGCAGGCAAGGGATTGAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR CCA 90 bp GATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCATCAGGTGCAGCTGGCTaGACATCTCGGCGAAGTCGC +
Preference number: 4 (lower is better)
Translates to: DPANNMESESMFTGTEHPSGAAG*TSRRSR
Trigger: GCGACTTCGCCGAGATGTCCAGCCAGCTGCACCTGA...TGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GGGACTGGGAGGGCCGAGGAGGTTCTCAGATGTTCTTCTCCTTTTGGGGCTTTTACACGAAGCGGTGCTTaGCAATTAGTGGTCGGATTT +
Preference number: 4 (lower is better)
Translates to: GTGRAEEVLRCSSPFGAFTRSGA*QLVVGF
Trigger: AAATCCGACCACTAATTGCCAAGCACCGCTTCGTGT...AAAAGCCCCAAAAGGAGAAGAACATCTGAGAACCTCCTCGGCCCTCCCAGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp AGCGGTGCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGATGGGACACAGAACATCCAGGTaGAGCCACACGAAGCGGTGC +
Preference number: 4 (lower is better)
Translates to: SGAWQLVVGFPKTGVLMGHRTSR*SHTKRC
Trigger: GCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTG...TCCCATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CTCTCTTGCGGAGTATTTGTGCAGCGAGGGACTGGGAGGGCCGAGGAGGTTCTCATCCGGCCAACAACATaGAAAGCGAATCTATGTTTA +
Preference number: 4 (lower is better)
Translates to: LSCGVFVQRGTGRAEEVLIRPTT*KANLCL
Trigger: TAAACATAGATTCGCTTTCCATGTTGTTGGCCGGAT...GAGAACCTCCTCGGCCCTCCCAGTCCCTCGCTGCACAAATACTCCGCAAGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CTGCCAAATCTTCGGAGACGACCCGATGGCCATAGACCCTGTCAGCTGTCATTCGCGTGGAAATCTCAGTaGGTACTAGGTCCATCTGAA +
Preference number: 4 (lower is better)
Translates to: LPNLRRRPDGHRPCQLSFAWKSQ*VLGPSE
Trigger: TTCAGATGGACCTAGTACCCACTGAGATTTCCACGC...GAATGACAGCTGACAGGGTCTATGGCCATCGGGTCGTCTCCGAAGATTTGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CTGATGCGGAAGTCACCGAAATGTTCACTTCCTCAAGTTCCAGAGGATTCTGTTCCTGTTGATCATCCCTaGAGGAGGCCAGTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: LMRKSPKCSLPQVPEDSVPVDHP*RRPVRA
Trigger: GGCCCTCACTGGCCTCCTCCAGGGATGATCAACAGG...AACAGAATCCTCTGGAACTTGAGGAAGTGAACATTTCGGTGACTTCCGCATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp AAGGTTCTTCGCAGAGGCATCACATCGACCCCAATACAGGTCCTTCATACCCTTGTGCTACAGCCAAAATaGGCCGTGGCCATTGCCTCT +
Preference number: 4 (lower is better)
Translates to: KVLRRGITSTPIQVLHTLVLQPK*AVAIAS
Trigger: AGAGGCAATGGCCACGGCCCATTTTGGCTGTAGCAC...AAGGGTATGAAGGACCTGTATTGGGGTCGATGTGATGCCTCTGCGAAGAACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp ACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGGTGCTTGGCAATTAGTGAACAAAGCTCCTCAGTaGCCAGTGACATCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: TGTEHPGGATRSGAWQLVNKAPQ*PVTSRF
Trigger: AAACCTGGATGTCACTGGCCACTGAGGAGCTTTGTT...CACTAATTGCCAAGCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CCCAGGGACGAGGAAACCTTCAAGAAACAAGGTCAAAGGGACAACAGATATAACCCCGCCGGGGAGGTCTaGCTTCATACCACAGGTTTC +
Preference number: 4 (lower is better)
Translates to: PRDEETFKKQGQRDNRYNPAGEV*LHTTGF
Trigger: GAAACCTGTGGTATGAAGCCAGACCTCCCCGGCGGG...GTTATATCTGTTGTCCCTTTGACCTTGTTTCTTGAAGGTTTCCTCGTCCCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCACCCGCCGGGGAGGTCTaGCTTCATACCACAGGTTTC +
Preference number: 4 (lower is better)
Translates to: DPANNMESESMFTGTEHPPAGEV*LHTTGF
Trigger: GAAACCTGTGGTATGAAGCCAGACCTCCCCGGCGGG...TGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp TTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGGTGCTTGGCAATTAAATACTGTACAGTTCTaGGGCCAAGAGGCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: FTGTEHPGGATRSGAWQLNTVQF*GQEAGH
Trigger: GTGCCCAGCCTCTTGGCCCCAGAACTGTACAGTATT...TAATTGCCAAGCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GTCAGCTGTCATTCTGGCCTCTCTTGCGGAGTATTTGTGCAGCGAGGGACTGGGCTTCTGTGCTCAGCTTaGTATGCAGAACAACCTTGT +
Preference number: 4 (lower is better)
Translates to: VSCHSGLSCGVFVQRGTGLLCSA*YAEQPC
Trigger: ACAAGGTTGTTCTGCATACCAAGCTGAGCACAGAAG...CCCAGTCCCTCGCTGCACAAATACTCCGCAAGAGAGGCCAGAATGACAGCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp ACCCAGGGTGATGCAAGCTCCCACCAGGGCCAAACTGAGCAGAGTCTTCAGAGACTTCTGTGCTCAGCTTaGTATGCAGAACAACCTTGT +
Preference number: 4 (lower is better)
Translates to: TQGDASSHQGQTEQSLQRLLCSA*YAEQPC
Trigger: ACAAGGTTGTTCTGCATACCAAGCTGAGCACAGAAG...TCTCTGAAGACTCTGCTCAGTTTGGCCCTGGTGGGAGCTTGCATCACCCTGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CCA 90 bp AACTCAATCCCTTGCCTGCAAGAGTCCCTTTGTCTTAAAGAAGCTGCAAGGTCACGCATCTCGGACCTGTaGCCTCAGCCCAGACTCACA +
Preference number: 4 (lower is better)
Translates to: NSIPCLQESLCLKEAARSRISDL*PQPRLT
Trigger: TGTGAGTCTGGGCTGAGGCCACAGGTCCGAGATGCG...TGACCTTGCAGCTTCTTTAAGACAAAGGGACTCTTGCAGGCAAGGGATTGAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR CCA 90 bp ATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGGAAACGGTGGTCCTaGGGACTCCTGGACCTTCAG +
Preference number: 4 (lower is better)
Translates to: MESESMFTGTEHPGGATRRKRWS*GLLDLQ
Trigger: CTGAAGGTCCAGGAGTCCCCAGGACCACCGTTTCCT...TCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678349.1
CDS-3UTR CCA 90 bp GAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCAGGCAGGCAGTAGTATaGTGGTTGCCAAGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: ESESMFTGTEHPGGATRSRQAVV*WLPRLQ
Trigger: CTGCAGCCTTGGCAACCACCATACTACTGCCTGCCT...GCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677227.1
CDS-3UTR TCA 90 bp ACAGCCAAAATGGGCCGTGGCCATTGCCTCTCCTCACGTTCCCAGCCTTCACCAATTCGACGTTTTGCCTaGAGACTGTTAATTGTTGTG +
Preference number: 4 (lower is better)
Translates to: TAKMGRGHCLSSRSQPSPIRRFA*RLLIVV
Trigger: CACAACAATTAACAGTCTTCAGGCAAAACGTCGAAT...TGGTGAAGGCTGGGAACGTGAGGAGAGGCAATGGCCACGGCCCATTTTGGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp GATTTAAGGGCATTTTTCCCATCGCTGTCCTTCGGCGTGGAAATCTCAGTGGGTCTGCTCTTCAGATGGTaGTCCGGCCAACAACATGGA +
Preference number: 4 (lower is better)
Translates to: DLRAFFPSLSFGVEISVGLLFRW*SGQQHG
Trigger: TCCATGTTGTTGGCCGGATCACCATCTGAAGAGCAG...ACCCACTGAGATTTCCACGCCGAAGGACAGCGATGGGAAAAATGCCCTTAAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp CTGCCAAATCTTCGGAGACGACCCGATGGCCATAGACCCTGTCAGCTGTCATTCGCAAAGAAATGCAAGTaGATGAACACCTTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: LPNLRRRPDGHRPCQLSFAKKCK*MNTFSP
Trigger: TGGGGAGAAGGTGTTCATTCACTTGCATTTCTTTGC...GAATGACAGCTGACAGGGTCTATGGCCATCGGGTCGTCTCCGAAGATTTGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp GTCACCGAAATGTTCACTTCCTCAAGTTCCAGAGGATTCTGTTTCTTACTCAGACCTGAAGGACAGCCATaGGAAAGCCCCCGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: VTEMFTSSSSRGFCFLLRPEGQP*ESPRGR
Trigger: CCTTCCGCGGGGGCTTTCTCATGGCTGTCCTTCAGG...TCTGAGTAAGAAACAGAATCCTCTGGAACTTGAGGAAGTGAACATTTCGGTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp CCCACGGCAGATTTTCCAAAAGGTTTAGGTGCATGGATTTACTCAGTATCTACACCTGAAGGACAGCCATaGGAAAGCCCCCGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: PTADFPKGLGAWIYSVSTPEGQP*ESPRGR
Trigger: CCTTCCGCGGGGGCTTTCTCATGGCTGTCCTTCAGG...TGTAGATACTGAGTAAATCCATGCACCTAAACCTTTTGGAAAATCTGCCGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp GTCAGCTGTCATTCTGGCCTCTCTTGCGGAGTATTTGTGCAGCGAGGGACTGGGCTGACTCCATTAAAATaGTTTTGGCAGGATAGCAGC +
Preference number: 4 (lower is better)
Translates to: VSCHSGLSCGVFVQRGTGLTPLK*FWQDSS
Trigger: GCTGCTATCCTGCCAAAATCATTTTAATGGAGTCAG...CCCAGTCCCTCGCTGCACAAATACTCCGCAAGAGAGGCCAGAATGACAGCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp CCCGCCGGGGAGGTCTGGCTTCATACCACAGGTTTCCTGCTTTCTTGGTGGAGCTCTGTGAATCCCGTTTaGACAACAACAAAAGACAAA +
Preference number: 4 (lower is better)
Translates to: PAGEVWLHTTGFLLSWWSSVNPV*TTTKDK
Trigger: TTTGTCTTTTGTTGTTGTTCAAACGGGATTCACAGA...GCTCCACCAAGAAAGCAGGAAACCTGTGGTATGAAGCCAGACCTCCCCGGCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp AAAGGTCTGATCATTCTGTTCCCTGAGGCCCGCCGGGGAGGTCTGGCTTCATACAAACTTCCAACTCCCTaGTCCAAACTTGGGAATGTT +
Preference number: 4 (lower is better)
Translates to: KGLIILFPEARRGGLASYKLPTP*SKLGNV
Trigger: AACATTCCCAAGTTTGGATCAGGGAGTTGGAAGTTT...GTATGAAGCCAGACCTCCCCGGCGGGCCTCAGGGAACAGAATGATCAGACCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp GGGACTGGGAGGGCCGAGGAGGTTCTCAGATGTTCTTCTCCTTTTGGGGCTTTTCACTTTGAGCCATGCTaGTGTCTCTGGAATCTAAAG +
Preference number: 4 (lower is better)
Translates to: GTGRAEEVLRCSSPFGAFHFEPC*CLWNLK
Trigger: CTTTAGATTCCAGAGACATCAGCATGGCTCAAAGTG...AAAAGCCCCAAAAGGAGAAGAACATCTGAGAACCTCCTCGGCCCTCCCAGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp TGCAGCGAGGGACTGGGAGGGCCGAGGAGGTTCTCAGATGTTCTTCTCCTTTTGGTCTCAGAATTTTCTTaGTTGAGCGAGCCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: CSEGLGGPRRFSDVLLLLVSEFS*LSEPFH
Trigger: ATGGAAAGGCTCGCTCAATCAAGAAAATTCTGAGAC...CAAAAGGAGAAGAACATCTGAGAACCTCCTCGGCCCTCCCAGTCCCTCGCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp GGAACATGGCACACACTGGAGATTCCAGTCCAAGGACTTTGGAATGTCAACTTACGGTCAGGTTGGGAGTaGACGCTTTGTCCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: GTWHTLEIPVQGLWNVNLRSGWE*TLCPEE
Trigger: CTCCTCTGGACAAAGCGTTCACTCCCAACCTGACCG...TAAGTTGACATTCCAAAGTCCTTGGACTGGAATCTCCAGTGTGTGCCATGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR TCA 90 bp ACTCTGATTTTATTTCGCCGGCTCCACAGCCTCCCATTGCCCCAGGAGCCCACCGAAACTTCAGTTACATaGGAGGGTAACACACTGAAA +
Preference number: 4 (lower is better)
Translates to: TLILFRRLHSLPLPQEPTETSVT*EGNTLK
Trigger: TTTCAGTGTGTTACCCTCTCATGTAACTGAAGTTTC...GGTGGGCTCCTGGGGCAATGGGAGGCTGTGGAGCCGGCGAAATAAAATCAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR TCA 90 bp ATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGGTGCTTGAGCCAGTCACAAGTGTaGGTCCACTTATGCGAGGTA +
Preference number: 4 (lower is better)
Translates to: IYVYRHRTSRWSHTKRCLSQSQV*VHLCEV
Trigger: TACCTCGCATAAGTGGACTCACACTTGTGACTGGCT...CAAGCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677227.1
CDS-3UTR GCA 90 bp CTTCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCATCCTGGATCCAGGTGTaGAGGTGCCGGTTCAGGTAC +
Preference number: 4 (lower is better)
Translates to: LQMVIRPTTWKANLCLQASWIQV*RCRFRY
Trigger: GTACCTGAACCGGCACCTGCACACCTGGATCCAGGA...TGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR GCA 90 bp GATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAATCCTGGATCCAGGTGTaGAGGTGCCGGTTCAGGTAC +
Preference number: 4 (lower is better)
Translates to: DGDPANNMESESMFTGTESWIQV*RCRFRY
Trigger: GTACCTGAACCGGCACCTGCACACCTGGATCCAGGA...TTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR GCA 90 bp AACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCCAAACAGAGGCCGCATaGTGGGGCCGTACAGTTCCA +
Preference number: 4 (lower is better)
Translates to: NNMESESMFTGTEHPGGAQTEAA*WGRTVP
Trigger: TGGAACTGTACGGCCCCAGCATGCGGCCTCTGTTTG...GGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp CTCTGGGTAACTCTAGCCTTCCTGATGCGGAAGTCACCGAAATGTTCACTTCCTATTCGGAGACCACACTaGCCTGTTGATCATCCCTGG +
Preference number: 4 (lower is better)
Translates to: LWVTLAFLMRKSPKCSLPIRRPH*PVDHPW
Trigger: CCAGGGATGATCAACAGGGCAGTGTGGTCTCCGAAT...AGGAAGTGAACATTTCGGTGACTTCCGCATCAGGAAGGCTAGAGTTACCCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp ATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGGTGCTTGGCCACACCCCTCTACTaGTCTTTCTTGACAGTGGAA +
Preference number: 4 (lower is better)
Translates to: IYVYRHRTSRWSHTKRCLATPLY*SFLTVE
Trigger: TTCCACTGTCAAGAAAGAGCAGTAGAGGGGTGTGGC...CAAGCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp GTCTGGCTTCATACCACAGGTTTCCTGCTTTCTTGGTGGAGCGTAAGCACCACTAGAGTTTTCTGCCCCTaGCAAATCTTCGGAGACGAC +
Preference number: 4 (lower is better)
Translates to: VWLHTTGFLLSWWSVSTTRVFCP*QIFGDD
Trigger: GTCGTCTCCGAAGATTTGGCAGGGGCAGAAAACTCT...AGTGGTGCTTACGCTCCACCAAGAAAGCAGGAAACCTGTGGTATGAAGCCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp CCCAGGGCCTCTGTTCCTTCCCTCTACAGTGATACATGTCTTAAGAAGGGTCGTACTGCCAAACGGAGCTaGACTTTGAGCCATGCTGAT +
Preference number: 4 (lower is better)
Translates to: PRASVPSLYSDTCLKKGRTAKRS*TLSHAD
Trigger: ATCAGCATGGCTCAAAGTGCAGCTCCGTTTGGCAGT...ACGACCCTTCTTAAGACATGTATCACTGTAGAGGGAAGGAACAGAGGCCCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp GTCTGGCTTCATACCACAGGTTTCCTGCTTTCTTGGTGGAGCGTAAGCACCACTACTGCCAAACGGAGCTaGACTTTGAGCCATGCTGAT +
Preference number: 4 (lower is better)
Translates to: VWLHTTGFLLSWWSVSTTTAKRS*TLSHAD
Trigger: ATCAGCATGGCTCAAAGTGCAGCTCCGTTTGGCAGT...AGTGGTGCTTACGCTCCACCAAGAAAGCAGGAAACCTGTGGTATGAAGCCAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp ATGGAACAGAATGATTCACTGGGTAAGACTAAAGGACTTGTATTATCACTCTCCCAGGTGGACCACAGGTaGCACCGGGCTGAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: MEQNDSLGKTKGLVLSLSQVDHR*HRAERR
Trigger: CCTGCGCTCAGCCCGGTGCCACCTGTGGTCCACCTG...GGAGAGTGATAATACAAGTCCTTTAGTCTTACCCAGTGAATCATTCTGTTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CCA 90 bp AATGCAATCCACTGTCACTCTTGCAAATTCTACCTTGGAGGGAAAAACTTAATGTGGCGGAGGGTCAGGTaGACCACAGGTGGCACCGGG +
Preference number: 4 (lower is better)
Translates to: NAIHCHSCKFYLGGKNLMWRRVR*TTGGTG
Trigger: CCCGGTGCCACCTGTGGTCCACCTGACCCTCCGCCA...CATTAAGTTTTTCCCTCCAAGGTAGAATTTGCAAGAGTGACAGTGGATTGCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GCAACATCAACTACTCTTAGAGCAAGTGCAGCCACAATACTGTACAGTTCTGGGCAGCCTCCGTTATCCTaGATCCAGGTGTGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: ATSTTLRASAATILYSSGQPPLS*IQVCRC
Trigger: GCACCTGCACACCTGGATCCAGGATAACGGAGGCTG...CCCAGAACTGTACAGTATTGTGGCTGCACTTGCTCTAAGAGTAGTTGATGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CCA 90 bp TCTTCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAGGCCGCATGCTaGGGCCGTACAGTTCCACAA +
Preference number: 4 (lower is better)
Translates to: SSDGDPANNMESESMFTGTEAAC*GRTVPQ
Trigger: TTGTGGAACTGTACGGCCCCAGCATGCGGCCTCTGT...GCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGATGGGACTGTCTACAGAGGCCGCATGCTaGGGCCGTACAGTTCCACAA +
Preference number: 4 (lower is better)
Translates to: AWQLVVGFPKTGVLMGLSTEAAC*GRTVPQ
Trigger: TTGTGGAACTGTACGGCCCCAGCATGCGGCCTCTGT...AGACAGTCCCATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GCAACATCAACTACTCTTAGAGCAAGTGCAGCCACAATACTGTACAGTTCTGGGCACAGAACATCCAGGTaGAGCCACACGAAGCGGTGC +
Preference number: 4 (lower is better)
Translates to: ATSTTLRASAATILYSSGHRTSR*SHTKRC
Trigger: GCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTG...CCCAGAACTGTACAGTATTGTGGCTGCACTTGCTCTAAGAGTAGTTGATGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGATGGGACTGTCTCACAGAACATCCAGGTaGAGCCACACGAAGCGGTGC +
Preference number: 4 (lower is better)
Translates to: AWQLVVGFPKTGVLMGLSHRTSR*SHTKRC
Trigger: GCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTG...AGACAGTCCCATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CTTCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACACAGAACATCCAGGTaGAGCCACACGAAGCGGTGC +
Preference number: 4 (lower is better)
Translates to: LQMVIRPTTWKANLCLQAHRTSR*SHTKRC
Trigger: GCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTG...TGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GTTTCTCATTTGTCACACAAGGTTCTTCGCAGAGGCATCACATCGACCCCAATACACAGAACATCCAGGTaGAGCCACACGAAGCGGTGC +
Preference number: 4 (lower is better)
Translates to: VSHLSHKVLRRGITSTPIHRTSR*SHTKRC
Trigger: GCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTG...TATTGGGGTCGATGTGATGCCTCTGCGAAGAACCTTGTGTGACAAATGAGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp ACAGCCAAAATGGGCCGTGGCCATTGCCTCTCCTCACGTTCCCAGCCTTCACCAATCCGGCCAACAACATaGAAAGCGAATCTATGTTTA +
Preference number: 4 (lower is better)
Translates to: TAKMGRGHCLSSRSQPSPIRPTT*KANLCL
Trigger: TAAACATAGATTCGCTTTCCATGTTGTTGGCCGGAT...TGGTGAAGGCTGGGAACGTGAGGAGAGGCAATGGCCACGGCCCATTTTGGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp TCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAGGCGGCCTGATGCTCTaGGTAACTCTAGCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: SDGDPANNMESESMFTGTGGLML*VTLAFL
Trigger: CAGGAAGGCTAGAGTTACCCAGAGCATCAGGCCGCC...TGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CAAGTTCCAGAGGATTCTGTTTCTTACTCAGACAGAGCCAGTATTGGGAGTTGGAGCCAAAATGGGCCGTaGCCATTGCCTCTCCTCACG +
Preference number: 4 (lower is better)
Translates to: QVPEDSVSYSDRASIGSWSQNGP*PLPLLT
Trigger: CGTGAGGAGAGGCAATGGCCACGGCCCATTTTGGCT...CCAACTCCCAATACTGGCTCTGTCTGAGTAAGAAACAGAATCCTCTGGAACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CCCAGGGACGAGGAAACCTTCAAGAAACAAGGTCAAAGGGACAACAGATATAACAGCCAAAATGGGCCGTaGCCATTGCCTCTCCTCACG +
Preference number: 4 (lower is better)
Translates to: PRDEETFKKQGQRDNRYNSQNGP*PLPLLT
Trigger: CGTGAGGAGAGGCAATGGCCACGGCCCATTTTGGCT...GTTATATCTGTTGTCCCTTTGACCTTGTTTCTTGAAGGTTTCCTCGTCCCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CTCTCTTGCGGAGTATTTGTGCAGCGAGGGACTGGGAGGGCCGAGGAGGTTCTCATAGCAGCACAGGATTaGATATTCCATATTCATCAC +
Preference number: 4 (lower is better)
Translates to: LSCGVFVQRGTGRAEEVLIAAQD*IFHIHH
Trigger: GTGATGAATATGGAATATCCAATCCTGTGCTGCTAT...GAGAACCTCCTCGGCCCTCCCAGTCCCTCGCTGCACAAATACTCCGCAAGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CTCTGGGTAACTCTAGCCTTCCTGATGCGGAAGTCACCGAAATGTTCACTTCCTAATACTGTACAGTTCTaGGGCCAAGAGGCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: LWVTLAFLMRKSPKCSLPNTVQF*GQEAGH
Trigger: GTGCCCAGCCTCTTGGCCCCAGAACTGTACAGTATT...AGGAAGTGAACATTTCGGTGACTTCCGCATCAGGAAGGCTAGAGTTACCCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp AAGGTTCTTCGCAGAGGCATCACATCGACCCCAATACAGGTCCTTCATACCCTTAATACTGTACAGTTCTaGGGCCAAGAGGCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: KVLRRGITSTPIQVLHTLNTVQF*GQEAGH
Trigger: GTGCCCAGCCTCTTGGCCCCAGAACTGTACAGTATT...AAGGGTATGAAGGACCTGTATTGGGGTCGATGTGATGCCTCTGCGAAGAACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CTCTCTTGCGGAGTATTTGTGCAGCGAGGGACTGGGAGGGCCGAGGAGGTTCTCAAGCTAGACATGTGTTaGGATTGCCCTGATTATTTA +
Preference number: 4 (lower is better)
Translates to: LSCGVFVQRGTGRAEEVLKLDMC*DCPDYL
Trigger: TAAATAATCAGGGCAATCCCAACACATGTCTAGCTT...GAGAACCTCCTCGGCCCTCCCAGTCCCTCGCTGCACAAATACTCCGCAAGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GCCACACAGCCAACGTGCCATGTGCTACAGCCAAAATGGGCCGTGGCCATTGCCAACAGAATGATTCACTaGGTAAGACTAAAGGACTTG +
Preference number: 4 (lower is better)
Translates to: ATQPTCHVLQPKWAVAIANRMIH*VRLKDL
Trigger: CAAGTCCTTTAGTCTTACCCAGTGAATCATTCTGTT...GGCAATGGCCACGGCCCATTTTGGCTGTAGCACATGGCACGTTGGCTGTGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp TGCAGCGAGGGACTGGGAGGGCCGAGGAGGTTCTCAGATGTTCTTCTCCTTTTGTTGAAGTTATTTTTCTaGGGCAGTCCAGATGAACCG +
Preference number: 4 (lower is better)
Translates to: CSEGLGGPRRFSDVLLLLLKLFF*GSPDEP
Trigger: CGGTTCATCTGGACTGCCCCAGAAAAATAACTTCAA...CAAAAGGAGAAGAACATCTGAGAACCTCCTCGGCCCTCCCAGTCCCTCGCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp TTTTTAGAGCCCTTGTCCCCAATTTGGAAAGTGCATATACTCTATTTAACTCTGAGCCCGCGCTGTGTGTaGTGCGGCGAGGGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: FLEPLSPIWKVHILYLTLSPRCV*CGEGWG
Trigger: TCCCCACCCCTCGCCGCACCACACACAGCGCGGGCT...CAGAGTTAAATAGAGTATATGCACTTTCCAAATTGGGGACAAGGGCTCTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000398117.1
CDS-3UTR CCA 90 bp AACTCAATCCCTTGCCTGCAAGAGTCCCTTTGTCTTAAAGAAGCTGCAAGGTCACCTCATCACGCCCACTaGGAACATGGCACACACTGG +
Preference number: 4 (lower is better)
Translates to: NSIPCLQESLCLKEAARSPHHAH*EHGTHW
Trigger: CCAGTGTGTGCCATGTTCCCAGTGGGCGTGATGAGG...TGACCTTGCAGCTTCTTTAAGACAAAGGGACTCTTGCAGGCAAGGGATTGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR CCA 90 bp TGGGTACTAGGTCCATCTGAAGTTCCCAACTCTTTTCCTCCCACCAGGTATGCAGTAGGAAGACCCTCCTaGTTTCTCAAGCTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: WVLGPSEVPNSFPPTRYAVGRPS*FLKLEE
Trigger: CTCCTCCAGCTTGAGAAACCAGGAGGGTCTTCCTAC...TGCATACCTGGTGGGAGGAAAAGAGTTGGGAACTTCAGATGGACCTAGTACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678301.1
CDS-3UTR CCA 90 bp CTTCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACCAAGGCTGCAGGCGTaGGGGAACAGGCATTACTGT +
Preference number: 4 (lower is better)
Translates to: LQMVIRPTTWKANLCLQAPRLQA*GNRHYC
Trigger: ACAGTAATGCCTGTTCCCCCACGCCTGCAGCCTTGG...TGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677227.1
3UTR CAA 72 bp GGAGGTCTGGCTTCATACCACAGGTTTCCTGCTTTCTaGGTGGAGCGTAAGCACCACTGCATTTCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: GGLASYHRFPAF*VERKHHCISGR
Trigger: TCTTCCTGAAATGCAGTGGTGCTTACGCTCCACCAAGAAAGCAGGAAACCTGTGGTATGAAGCCAGACCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp AAGGTTCTTCGCAGAGGCATCACATCGACCCCAATACAGGTCCTTCATACCCTTTTTGAAACTTCCCAATaGATCAGGAGTCGCGGGGAG +
Preference number: 4 (lower is better)
Translates to: KVLRRGITSTPIQVLHTLFETSQ*IRSRGE
Trigger: CTCCCCGCGACTCCTGATTCATTGGGAAGTTTCAAA...AAGGGTATGAAGGACCTGTATTGGGGTCGATGTGATGCCTCTGCGAAGAACCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333681.5
ENST00000398117.1
CDS-3UTR TCA 90 bp CCCAGGGACGAGGAAACCTTCAAGAAACAAGGTCAAAGGGACAACAGATATAACCGCTCTCCACACACATaGCCCCACCGAACTCAAAGA +
Preference number: 4 (lower is better)
Translates to: PRDEETFKKQGQRDNRYNRSPHT*PHRTQR
Trigger: TCTTTGAGTTCGGTGGGGTCATGTGTGTGGAGAGCG...GTTATATCTGTTGTCCCTTTGACCTTGTTTCTTGAAGGTTTCCTCGTCCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR TCA 90 bp AACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCCGCTCTCCACACACATaGCCCCACCGAACTCAAAGA +
Preference number: 4 (lower is better)
Translates to: NNMESESMFTGTEHPGGARSPHT*PHRTQR
Trigger: TCTTTGAGTTCGGTGGGGTCATGTGTGTGGAGAGCG...GGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR TCA 90 bp GCAACATCAACTACTCTTAGAGCAAGTGCAGCCACAATACTGTACAGTTCTGGGCCACCAGGGCCAAACTaGGCAGAGTCTTCAGAGACA +
Preference number: 4 (lower is better)
Translates to: ATSTTLRASAATILYSSGPPGPN*AESSET
Trigger: TGTCTCTGAAGACTCTGCTCAGTTTGGCCCTGGTGG...CCCAGAACTGTACAGTATTGTGGCTGCACTTGCTCTAAGAGTAGTTGATGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp TATGCATCATGTGAGTCATATGCAAAGAGTCTCTTCTTCAGGCCAGGGAGGCATCCACCAGGGCCAAACTaGGCAGAGTCTTCAGAGACA +
Preference number: 4 (lower is better)
Translates to: YASCESYAKSLFFRPGRHPPGPN*AESSET
Trigger: TGTCTCTGAAGACTCTGCTCAGTTTGGCCCTGGTGG...ATGCCTCCCTGGCCTGAAGAAGAGACTCTTTGCATATGACTCACATGATGCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp TTGCCCAGGGACGAGGAAACCTTCAAGAAACAAGGTCAAAGGGACAACAGATATCCACCAGGGCCAAACTaGGCAGAGTCTTCAGAGACA +
Preference number: 4 (lower is better)
Translates to: LPRDEETFKKQGQRDNRYPPGPN*AESSET
Trigger: TGTCTCTGAAGACTCTGCTCAGTTTGGCCCTGGTGG...ATATCTGTTGTCCCTTTGACCTTGTTTCTTGAAGGTTTCCTCGTCCCTGGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp ACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGGTGCTTGGCAATTAGTGTTGGCAGTAAATAGCTaGTTCGACGTTTTGCCTGAA +
Preference number: 4 (lower is better)
Translates to: TGTEHPGGATRSGAWQLVLAVNS*FDVLPE
Trigger: TTCAGGCAAAACGTCGAATCAGCTATTTACTGCCAA...CACTAATTGCCAAGCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp TCCATGACACCTCACTTCAATGCTTCTTTTAGGATTTGTGACCCTCTCCAAAGTCTCCCATGCTCCACGTaGAAACGGGCCTACCTGGAG +
Preference number: 4 (lower is better)
Translates to: SMTPHFNASFRICDPLQSLPCST*KRAYLE
Trigger: CTCCAGGTAGGCCCGTTTTCACGTGGAGCATGGGAG...ACTTTGGAGAGGGTCACAAATCCTAAAAGAAGCATTGAAGTGAGGTGTCATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp ATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGGTGCTTGGCAACACTTTGAGCCATGCTaGTGTCTCTGGAATCTAAAG +
Preference number: 4 (lower is better)
Translates to: MFTGTEHPGGATRSGAWQHFEPC*CLWNLK
Trigger: CTTTAGATTCCAGAGACATCAGCATGGCTCAAAGTG...TTGCCAAGCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp GGGACTGGGAGGGCCGAGGAGGTTCTCAGATGTTCTTCTCCTTTTGGGGCTTTTCATTCATGCTCCATCTaGTTTTCTTTGCATCCAGTG +
Preference number: 4 (lower is better)
Translates to: GTGRAEEVLRCSSPFGAFHSCSI*FSLHPV
Trigger: CACTGGATGCAAAGAAAATCAGATGGAGCATGAATG...AAAAGCCCCAAAAGGAGAAGAACATCTGAGAACCTCCTCGGCCCTCCCAGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp GGCCATAGACCCTGTCAGCTGTCATTCTGGCCTCTCTTGCGGAGTATTTGTGCACAGAATTTTCTTGATTaGGCGAGCCTTTCCATCCTC +
Preference number: 4 (lower is better)
Translates to: GHRPCQLSFWPLLRSICAQNFLD*ASLSIL
Trigger: GAGGATGGAAAGGCTCGCTCAATCAAGAAAATTCTG...TGCACAAATACTCCGCAAGAGAGGCCAGAATGACAGCTGACAGGGTCTATGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp CCGTCTGCTCTTCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTCCTGTACACACTGAGTaGAAGCAGGGCATACACACT +
Preference number: 4 (lower is better)
Translates to: PSALQMVIRPTTWKANLCPVHTE*KQGIHT
Trigger: AGTGTGTATGCCCTGCTTTCACTCAGTGTGTACAGG...ACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGAAGAGCAGACGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398117.1
CDS-3UTR TCA 90 bp AAGGTTCTTCGCAGAGGCATCACATCGACCCCAATACAGGTCCTTCATACCCTTGGGAAGCAACAACTCTaGTTTTATTTCGCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: KVLRRGITSTPIQVLHTLGKQQL*FYFAGS
Trigger: GGAGCCGGCGAAATAAAATCAGAGTTGTTGCTTCCC...AAGGGTATGAAGGACCTGTATTGGGGTCGATGTGATGCCTCTGCGAAGAACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678349.1
CDS-3UTR TCA 90 bp ACTCTGATTTTATTTCGCCGGCTCCACAGCCTCCCATTGCCCCAGGAGCCCACCATCATTCCAAGGACCTaGTTTATCCATGTTATGGAA +
Preference number: 4 (lower is better)
Translates to: TLILFRRLHSLPLPQEPTIIPRT*FIHVME
Trigger: TTCCATAACATGGATAAATCAGGTCCTTGGAATGAT...GGTGGGCTCCTGGGGCAATGGGAGGCTGTGGAGCCGGCGAAATAAAATCAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR GCA 90 bp TCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAATCCAGGTGTGCAGGTaGCGGTTCAGGTACTCAGTC +
Preference number: 4 (lower is better)
Translates to: SDGDPANNMESESMFTGTIQVCR*RFRYSV
Trigger: GACTGAGTACCTGAACCGGCACCTGCACACCTGGAT...TGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR GCA 90 bp TCGACGTTTTGCCTGAAGACTGTTAATTGTTGTGTGTGTGTGTGTCTGTCTGTGCAAACAGAGGCCGCATaGTGGGGCCGTACAGTTCCA +
Preference number: 4 (lower is better)
Translates to: STFCLKTVNCCVCVCLSVQTEAA*WGRTVP
Trigger: TGGAACTGTACGGCCCCAGCATGCGGCCTCTGTTTG...CACAGACAGACACACACACACACAACAATTAACAGTCTTCAGGCAAAACGTCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp GATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAAGCCACACGAAGCGGTaGTTGGCAATTAGTGGTCGG +
Preference number: 4 (lower is better)
Translates to: DPANNMESESMFTGTEHPSHTKR*LAISGR
Trigger: CCGACCACTAATTGCCAAGCACCGCTTCGTGTGGCT...TGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp GATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAAAGCCACACGAAGCGGTaGTTGGCAATTAGTGGTCGG +
Preference number: 4 (lower is better)
Translates to: DGDPANNMESESMFTGTESHTKR*LAISGR
Trigger: CCGACCACTAATTGCCAAGCACCGCTTCGTGTGGCT...TTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp CCCAGGGACGAGGAAACCTTCAAGAAACAAGGTCAAAGGGACAACAGATATAACAGCCACACGAAGCGGTaGTTGGCAATTAGTGGTCGG +
Preference number: 4 (lower is better)
Translates to: PRDEETFKKQGQRDNRYNSHTKR*LAISGR
Trigger: CCGACCACTAATTGCCAAGCACCGCTTCGTGTGGCT...GTTATATCTGTTGTCCCTTTGACCTTGTTTCTTGAAGGTTTCCTCGTCCCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp TTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGGTGCTTGGCAATTACTTTTTCCATCCGTCTaGTCTTCAGATGGTGATCCG +
Preference number: 4 (lower is better)
Translates to: FTGTEHPGGATRSGAWQLLFPSV*SSDGDP
Trigger: CGGATCACCATCTGAAGAGCAGACGGATGGAAAAAG...TAATTGCCAAGCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp TTCCTGATGCGGAAGTCACCGAAATGTTCACTTCCTCAAGTTCCAGAGGATTCTAGCCAACGTGCCATGTaGTACAGCCAAAATGGGCCG +
Preference number: 4 (lower is better)
Translates to: FLMRKSPKCSLPQVPEDSSQRAM*YSQNGP
Trigger: CGGCCCATTTTGGCTGTAGCACATGGCACGTTGGCT...AGAATCCTCTGGAACTTGAGGAAGTGAACATTTCGGTGACTTCCGCATCAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp AACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCAGCCAACGTGCCATGTaGTACAGCCAAAATGGGCCG +
Preference number: 4 (lower is better)
Translates to: NNMESESMFTGTEHPGGASQRAM*YSQNGP
Trigger: CGGCCCATTTTGGCTGTAGCACATGGCACGTTGGCT...GGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp ACAGCCAAAATGGGCCGTGGCCATTGCCTCTCCTCACGTTCCCAGCCTTCACCAGAAAACGATCACCTTTaGTCACAAATAGTGTATAGG +
Preference number: 4 (lower is better)
Translates to: TAKMGRGHCLSSRSQPSPENDHL*SQIVYR
Trigger: CCTATACACTATTTGTGAGCAAAGGTGATCGTTTTC...TGGTGAAGGCTGGGAACGTGAGGAGAGGCAATGGCCACGGCCCATTTTGGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp AAAGGTCTGATCATTCTGTTCCCTGAGGCCCGCCGGGGAGGTCTGGCTTCATACAAAGAGCAGTTAAGATaGAGATGTGAATCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: KGLIILFPEARRGGLASYKEQLR*RCESLF
Trigger: GAAGAGGGATTCACATCTGCATCTTAACTGCTCTTT...GTATGAAGCCAGACCTCCCCGGCGGGCCTCAGGGAACAGAATGATCAGACCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp TCCTCACGTTCCCAGCCTTCACCATGTCCTTCTGATAGGAAGGGCCCAGGGCCTTCTAAAAACAGCCACTaGCTTAAAAGTACAGTTGGA +
Preference number: 4 (lower is better)
Translates to: SSRSQPSPCPSDRKGPGPSKNSH*LKSTVG
Trigger: TCCAACTGTACTTTTAAGGCAGTGGCTGTTTTTAGA...AGGCCCTGGGCCCTTCCTATCAGAAGGACATGGTGAAGGCTGGGAACGTGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp TGGGTACTAGGTCCATCTGAAGTTCCCAACTCTTTTCCTCCCACCAGGTATGCAACTGCCAAACGGAGCTaGACTTTGAGCCATGCTGAT +
Preference number: 4 (lower is better)
Translates to: WVLGPSEVPNSFPPTRYATAKRS*TLSHAD
Trigger: ATCAGCATGGCTCAAAGTGCAGCTCCGTTTGGCAGT...TGCATACCTGGTGGGAGGAAAAGAGTTGGGAACTTCAGATGGACCTAGTACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp CTGCCAAATCTTCGGAGACGACCCGATGGCCATAGACCCTGTCAGCTGTCATTCTTTATACCATTGCACTaGCAAACGGAGCTGCACTTT +
Preference number: 4 (lower is better)
Translates to: LPNLRRRPDGHRPCQLSFFIPLH*QTELHF
Trigger: AAAGTGCAGCTCCGTTTGGCAGTGCAATGGTATAAA...GAATGACAGCTGACAGGGTCTATGGCCATCGGGTCGTCTCCGAAGATTTGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp AGAACATCCAGGTGGAGCCACACGAAGCGGTGCTTGGCAATTAGTGGTCGGATTATCCACTGTCACTCTTaGAAATTCTACCTTGGAGGG +
Preference number: 4 (lower is better)
Translates to: RTSRWSHTKRCLAISGRIIHCHS*KFYLGG
Trigger: CCCTCCAAGGTAGAATTTGCAAGAGTGACAGTGGAT...AATCCGACCACTAATTGCCAAGCACCGCTTCGTGTGGCTCCACCTGGATGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CTGTCACTCTTGCAAATTCTACCTTGGAGGGAAAAACTTAATGAAATGAGCTATAAGTCGTCGCCGGCCTaGCGGAGGGTCAGGTGGACC +
Preference number: 4 (lower is better)
Translates to: LSLLQILPWREKLNEMSYKSSPA*RRVRWT
Trigger: GGTCCACCTGACCCTCCGCCAGGCCGGCGACGACTT...ATAGCTCATTTCATTAAGTTTTTCCCTCCAAGGTAGAATTTGCAAGAGTGACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGATGGGACTGTCTTAAATGGCGTCAGGTGCAGCTaGCTGGACATCTCGGCGAAG +
Preference number: 4 (lower is better)
Translates to: AISGRISKDRSFDGTVLNGVRCS*LDISAK
Trigger: CTTCGCCGAGATGTCCAGCCAGCTGCACCTGACGCC...ATTTAAGACAGTCCCATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GAAGGGGTACCATTTACCACCACATCCTACTGGATTACAAACGCTAGATCTTTGGGCGGCCTGATGCTCTaGGTAACTCTAGCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: EGVPFTTTSYWITNARSLGGLML*VTLAFL
Trigger: CAGGAAGGCTAGAGTTACCCAGAGCATCAGGCCGCC...CAAAGATCTAGCGTTTGTAATCCAGTAGGATGTGGTGGTAAATGGTACCCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678349.1
CDS-3UTR CCA 90 bp AGACATATCCAGCTTGAAATTTATACCATTGCACTGCCAAACGGAGCTGCACTTCCTGTTGATCATCCCTaGAGGAGGCCAGTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: RHIQLEIYTIALPNGAALPVDHP*RRPVRA
Trigger: GGCCCTCACTGGCCTCCTCCAGGGATGATCAACAGG...AAGTGCAGCTCCGTTTGGCAGTGCAATGGTATAAATTTCAAGCTGGATATGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GTAGCTGAGACTCAGGGCTTATCTCACCTTCTCAGAATGCTTTTGAAGAATCAACCCGCCGGGGAGGTCTaGCTTCATACCACAGGTTTC +
Preference number: 4 (lower is better)
Translates to: VAETQGLSHLLRMLLKNQPAGEV*LHTTGF
Trigger: GAAACCTGTGGTATGAAGCCAGACCTCCCCGGCGGG...TTGATTCTTCAAAAGCATTCTGAGAAGGTGAGATAAGCCCTGAGTCTCAGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp TCACACGGGAAACCAGTGCGCCTGTCCACGGCACAGAATCCAAATCTACTCTTCACTTCTAAAGCAGCTTaGAGGATCTTACCACGTGGA +
Preference number: 4 (lower is better)
Translates to: SHGKPVRLSTAQNPNLLFTSKAA*RILPRG
Trigger: TCCACGTGGTAAGATCCTCCAAGCTGCTTTAGAAGT...GAAGAGTAGATTTGGATTCTGTGCCGTGGACAGGCGCACTGGTTTCCCGTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678134.1
CDS-3UTR CCA 90 bp TCCATGACACCTCACTTCAATGCTTCTTTTAGGATTTGTGACCCTCTCCAAAGTCAAGCCAGGAAACGGTaGTCCTGGGGACTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: SMTPHFNASFRICDPLQSQARKR*SWGLLD
Trigger: GTCCAGGAGTCCCCAGGACCACCGTTTCCTGGCTTG...ACTTTGGAGAGGGTCACAAATCCTAAAAGAAGCATTGAAGTGAGGTGTCATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678349.1
CDS-3UTR CCA 90 bp CCGTCTGCTCTTCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTCCTGGTTTCTCAAGCTaGAGGAGCAGACTGAAAGGA +
Preference number: 4 (lower is better)
Translates to: PSALQMVIRPTTWKANLCPGFSS*RSRLKG
Trigger: TCCTTTCAGTCTGCTCCTCCAGCTTGAGAAACCAGG...ACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGAAGAGCAGACGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678301.1
3UTR CAA 72 bp TTAAAGACTTTTAGATGGCAGGCGTTATCGGTCAGGTaGGGAGTGAACGCTTTGTCCAGAGGAGGAGGTAGG +
Preference number: 4 (lower is better)
Translates to: LKTFRWQALSVR*GVNALSRGGGR
Trigger: CCTACCTCCTCCTCTGGACAAAGCGTTCACTCCCAACCTGACCGATAACGCCTGCCATCTAAAAGTCTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589955.2
ENST00000678349.1
CDS-3UTR TCA 90 bp TTCATTGTTACTTCTAAAGCAGCTTGGAGGATCTTACCACGTGGAGCATACTGCCCACCAGGGCCAAACTaGGCAGAGTCTTCAGAGACA +
Preference number: 4 (lower is better)
Translates to: FIVTSKAAWRILPRGAYCPPGPN*AESSET
Trigger: TGTCTCTGAAGACTCTGCTCAGTTTGGCCCTGGTGG...GCAGTATGCTCCACGTGGTAAGATCCTCCAAGCTGCTTTAGAAGTAACAATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp GGCCATAGACCCTGTCAGCTGTCATTCTGGCCTCTCTTGCGGAGTATTTGTGCATTGGCAGTAAATAGCTaGTTCGACGTTTTGCCTGAA +
Preference number: 4 (lower is better)
Translates to: GHRPCQLSFWPLLRSICALAVNS*FDVLPE
Trigger: TTCAGGCAAAACGTCGAATCAGCTATTTACTGCCAA...TGCACAAATACTCCGCAAGAGAGGCCAGAATGACAGCTGACAGGGTCTATGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp CAAGTTCCAGAGGATTCTGTTTCTTACTCAGACAGAGCCAGTATTGGGAGTTGGCTGCTCTTCAGATGGTaGTCCGGCCAACAACATGGA +
Preference number: 4 (lower is better)
Translates to: QVPEDSVSYSDRASIGSWLLFRW*SGQQHG
Trigger: TCCATGTTGTTGGCCGGATCACCATCTGAAGAGCAG...CCAACTCCCAATACTGGCTCTGTCTGAGTAAGAAACAGAATCCTCTGGAACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp TATGCATCATGTGAGTCATATGCAAAGAGTCTCTTCTTCAGGCCAGGGAGGCATCTGCTCTTCAGATGGTaGTCCGGCCAACAACATGGA +
Preference number: 4 (lower is better)
Translates to: YASCESYAKSLFFRPGRHLLFRW*SGQQHG
Trigger: TCCATGTTGTTGGCCGGATCACCATCTGAAGAGCAG...ATGCCTCCCTGGCCTGAAGAAGAGACTCTTTGCATATGACTCACATGATGCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp CATCCGTCTGCTCTTCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTAGGTACTAGGTCCATCTaGAGTTCCCAACTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: HPSALQMVIRPTTWKANLGTRSI*SSQLFS
Trigger: GGAAAAGAGTTGGGAACTTCAGATGGACCTAGTACC...TAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGAAGAGCAGACGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp ATAGCTGATTCGACGTTTTGCCTGAAGACTGTTAATTGTTGTGTGTGTGTGTGTCTCCCATGCTCCACGTaGAAACGGGCCTACCTGGAG +
Preference number: 4 (lower is better)
Translates to: IADSTFCLKTVNCCVCVCLPCST*KRAYLE
Trigger: CTCCAGGTAGGCCCGTTTTCACGTGGAGCATGGGAG...ACACACACACACACAACAATTAACAGTCTTCAGGCAAAACGTCGAATCAGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp CCAACTCTTTTCCTCCCACCAGGTATGCATCATGTGAGTCATATGCAAAGAGTCTGGGTGGGTCTGTGTTaGAACAGGCCACGTAAAGCA +
Preference number: 4 (lower is better)
Translates to: PTLFLPPGMHHVSHMQRVWVGLC*NRPRKA
Trigger: TGCTTTACGTGGCCTGTTTCAACACAGACCCACCCA...GACTCTTTGCATATGACTCACATGATGCATACCTGGTGGGAGGAAAAGAGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp GCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGATGGGACTGTCTTGGGTGGGTCTGTGTTaGAACAGGCCACGTAAAGCA +
Preference number: 4 (lower is better)
Translates to: AWQLVVGFPKTGVLMGLSWVGLC*NRPRKA
Trigger: TGCTTTACGTGGCCTGTTTCAACACAGACCCACCCA...AGACAGTCCCATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp CAGCCTGCAGCTTTGTTTCATGGTACATCACTGACAATGCATATTATTTCTACTGATCATTCTGTTCCCTaGGGCCCGCCGGGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: QPAALFHGTSLTMHIISTDHSVP*GPPGRS
Trigger: AGACCTCCCCGGCGGGCCTCAGGGAACAGAATGATC...AGTAGAAATAATATGCATTGTCAGTGATGTACCATGAAACAAAGCTGCAGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp ACAGCCTGCAGCTTTGTTTCATGGTACATCACTGACAATGCATATTATTTCTACGATCATTCTGTTCCCTaGGGCCCGCCGGGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: TACSFVSWYITDNAYYFYDHSVP*GPPGRS
Trigger: AGACCTCCCCGGCGGGCCTCAGGGAACAGAATGATC...GTAGAAATAATATGCATTGTCAGTGATGTACCATGAAACAAAGCTGCAGGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp TGCAGCGAGGGACTGGGAGGGCCGAGGAGGTTCTCAGATGTTCTTCTCCTTTTGTCTGTGAATCCCGTTTaGACAACAACAAAAGACAAA +
Preference number: 4 (lower is better)
Translates to: CSEGLGGPRRFSDVLLLLSVNPV*TTTKDK
Trigger: TTTGTCTTTTGTTGTTGTTCAAACGGGATTCACAGA...CAAAAGGAGAAGAACATCTGAGAACCTCCTCGGCCCTCCCAGTCCCTCGCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp TGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGGTGCTTGGCAATTGTTGGCGTCTTGTTTaGACTAAATTGAGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: CLQAQNIQVEPHEAVLGNCWRLV*TKLRCF
Trigger: GAAGCACCTCAATTTAGTTCAAACAAGACGCCAACA...ATTGCCAAGCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp AACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCAACGGAGCTGCACTTTaGGCCATGCTGATGTCTCTG +
Preference number: 4 (lower is better)
Translates to: NNMESESMFTGTEHPGGANGAAL*AMLMSL
Trigger: CAGAGACATCAGCATGGCTCAAAGTGCAGCTCCGTT...GGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp GGGCCCACGGCAGATTTTCCAAAAGGTTTAGGTGCATGGATTTACTCAGTATCTAACGGAGCTGCACTTTaGGCCATGCTGATGTCTCTG +
Preference number: 4 (lower is better)
Translates to: GPTADFPKGLGAWIYSVSNGAAL*AMLMSL
Trigger: CAGAGACATCAGCATGGCTCAAAGTGCAGCTCCGTT...AGATACTGAGTAAATCCATGCACCTAAACCTTTTGGAAAATCTGCCGTGGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp GGGACTGGGAGGGCCGAGGAGGTTCTCAGATGTTCTTCTCCTTTTGGGGCTTTTGAGATGCATATTTCATaGTTGTCCAAGGTCATGGTT +
Preference number: 4 (lower is better)
Translates to: GTGRAEEVLRCSSPFGAFEMHIS*LSKVMV
Trigger: AACCATGACCTTGGACAATCATGAAATATGCATCTC...AAAAGCCCCAAAAGGAGAAGAACATCTGAGAACCTCCTCGGCCCTCCCAGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp TGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGGTGCTTGGCAATCATTCATGCTCCATCTaGTTTTCTTTGCATCCAGTG +
Preference number: 4 (lower is better)
Translates to: CLQAQNIQVEPHEAVLGNHSCSI*FSLHPV
Trigger: CACTGGATGCAAAGAAAATCAGATGGAGCATGAATG...ATTGCCAAGCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp ATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGGTGCTTGGCAACATTCATGCTCCATCTaGTTTTCTTTGCATCCAGTG +
Preference number: 4 (lower is better)
Translates to: MFTGTEHPGGATRSGAWQHSCSI*FSLHPV
Trigger: CACTGGATGCAAAGAAAATCAGATGGAGCATGAATG...TTGCCAAGCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp AACTCAATCCCTTGCCTGCAAGAGTCCCTTTGTCTTAAAGAAGCTGCAAGGTCATTCATAAGCAGTCCCTaGAACCTCCCTCCGGTTCCA +
Preference number: 4 (lower is better)
Translates to: NSIPCLQESLCLKEAARSFISSP*NLPPVP
Trigger: TGGAACCGGAGGGAGGTTTCAGGGACTGCTTATGAA...TGACCTTGCAGCTTCTTTAAGACAAAGGGACTCTTGCAGGCAAGGGATTGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR GCA 90 bp CATCCGTCTGCTCTTCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTACTTTTTCCATCCGTCTaGTCTTCAGATGGTGATCCG +
Preference number: 4 (lower is better)
Translates to: HPSALQMVIRPTTWKANLLFPSV*SSDGDP
Trigger: CGGATCACCATCTGAAGAGCAGACGGATGGAAAAAG...TAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGAAGAGCAGACGGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp AGCGGTGCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGATGGGAGCCACACCCCTCTACTaGTCTTTCTTGACAGTGGAA +
Preference number: 4 (lower is better)
Translates to: SGAWQLVVGFPKTGVLMGATPLY*SFLTVE
Trigger: TTCCACTGTCAAGAAAGAGCAGTAGAGGGGTGTGGC...TCCCATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp GCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGATGGGACTGTCTGCCACACAGCCAACGTaGCATGTGCTACAGCCAAAA +
Preference number: 4 (lower is better)
Translates to: AWQLVVGFPKTGVLMGLSATQPT*HVLQPK
Trigger: TTTTGGCTGTAGCACATGGCACGTTGGCTGTGTGGC...AGACAGTCCCATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp ACGTTTTGCCTGAAGACTGTTAATTGTTGTGTGTGTGTGTGTCTGTCTGTGTGTCTTGCGGAGTATTTGTaGAGCGAGGGACTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: TFCLKTVNCCVCVCLSVCLAEYL*SEGLGG
Trigger: CCCTCCCAGTCCCTCGCTGCACAAATACTCCGCAAG...ACACACAGACAGACACACACACACACAACAATTAACAGTCTTCAGGCAAAACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp GTCAGCTGTCATTCTGGCCTCTCTTGCGGAGTATTTGTGCAGCGAGGGACTGGGTTGCATCCAGTGAGATaGATATTTCATGATTGTCCA +
Preference number: 4 (lower is better)
Translates to: VSCHSGLSCGVFVQRGTGLHPVR*IFHDCP
Trigger: TGGACAATCATGAAATATGCATCTCACTGGATGCAA...CCCAGTCCCTCGCTGCACAAATACTCCGCAAGAGAGGCCAGAATGACAGCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp GTCTGGCTTCATACCACAGGTTTCCTGCTTTCTTGGTGGAGCGTAAGCACCACTATCCACTGTCACTCTTaGAAATTCTACCTTGGAGGG +
Preference number: 4 (lower is better)
Translates to: VWLHTTGFLLSWWSVSTTIHCHS*KFYLGG
Trigger: CCCTCCAAGGTAGAATTTGCAAGAGTGACAGTGGAT...AGTGGTGCTTACGCTCCACCAAGAAAGCAGGAAACCTGTGGTATGAAGCCAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp TGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGGTGCTTGGCAATCTTCCCCAAAAGAAATaGAATCCACTGTCACTCTTG +
Preference number: 4 (lower is better)
Translates to: CLQAQNIQVEPHEAVLGNLPQKK*NPLSLL
Trigger: CAAGAGTGACAGTGGATTGCATTTCTTTTGGGGAAG...ATTGCCAAGCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp GAAGGGGTACCATTTACCACCACATCCTACTGGATTACAAACGCTAGATCTTTGCCGGTTCCAACAAGCTaGTCAAGCCAGGAAACGGTG +
Preference number: 4 (lower is better)
Translates to: EGVPFTTTSYWITNARSLPVPTS*SSQETV
Trigger: CACCGTTTCCTGGCTTGAGCAGCTTGTTGGAACCGG...CAAAGATCTAGCGTTTGTAATCCAGTAGGATGTGGTGGTAAATGGTACCCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589955.2
ENST00000678349.1
CDS-3UTR GCA 90 bp ACTCTGATTTTATTTCGCCGGCTCCACAGCCTCCCATTGCCCCAGGAGCCCACCAAGGAAGCACTGAATTaGATCCTGTTTTTCAAAGAT +
Preference number: 4 (lower is better)
Translates to: TLILFRRLHSLPLPQEPTKEALN*ILFFKD
Trigger: ATCTTTGAAAAACAGGATGCAATTCAGTGCTTCCTT...GGTGGGCTCCTGGGGCAATGGGAGGCTGTGGAGCCGGCGAAATAAAATCAGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR GCA 90 bp AACTCAATCCCTTGCCTGCAAGAGTCCCTTTGTCTTAAAGAAGCTGCAAGGTCAGAGCCCTGGGGACAGTaGAGATTATTGTCACATGCC +
Preference number: 4 (lower is better)
Translates to: NSIPCLQESLCLKEAARSEPWGQ*RLLSHA
Trigger: GGCATGTGACAATAATCTGCACTGTCCCCAGGGCTC...TGACCTTGCAGCTTCTTTAAGACAAAGGGACTCTTGCAGGCAAGGGATTGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR CCA 90 bp TTTCCAAAAGGTTTAGGTGCATGGATTTACTCAGTATCTACACTACAGTCTTATCAGGTGGACCACAGGTaGCACCGGGCTGAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: FPKGLGAWIYSVSTLQSYQVDHR*HRAERR
Trigger: CCTGCGCTCAGCCCGGTGCCACCTGTGGTCCACCTG...ATAAGACTGTAGTGTAGATACTGAGTAAATCCATGCACCTAAACCTTTTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CCA 90 bp AAACATGCATGTAATCCTGAATACCATGAATTAAATGCGGAATTGCCCAGGGACTCAGGTGCAGCTGGCTaGACATCTCGGCGAAGTCGC +
Preference number: 4 (lower is better)
Translates to: KHACNPEYHELNAELPRDSGAAG*TSRRSR
Trigger: GCGACTTCGCCGAGATGTCCAGCCAGCTGCACCTGA...GTCCCTGGGCAATTCCGCATTTAATTCATGGTATTCAGGATTACATGCATGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCACACGAAGCGGTGCTTaGCAATTAGTGGTCGGATTT +
Preference number: 4 (lower is better)
Translates to: ESESMFTGTEHPGGATRSTRSGA*QLVVGF
Trigger: AAATCCGACCACTAATTGCCAAGCACCGCTTCGTGT...GCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp ACGTTTTGCCTGAAGACTGTTAATTGTTGTGTGTGTGTGTGTCTGTCTGTGTGTCACAGAACATCCAGGTaGAGCCACACGAAGCGGTGC +
Preference number: 4 (lower is better)
Translates to: TFCLKTVNCCVCVCLSVCHRTSR*SHTKRC
Trigger: GCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTG...ACACACAGACAGACACACACACACACAACAATTAACAGTCTTCAGGCAAAACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CCACCAGTGTTCCCATCTTCTGTGCTCAGCTTGGTATGCAGAACAACCTTGTTGGCGTGGAAATCTCAGTaGGTACTAGGTCCATCTGAA +
Preference number: 4 (lower is better)
Translates to: PPVFPSSVLSLVCRTTLLAWKSQ*VLGPSE
Trigger: TTCAGATGGACCTAGTACCCACTGAGATTTCCACGC...CAACAAGGTTGTTCTGCATACCAAGCTGAGCACAGAAGATGGGAACACTGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp AAGGTTCTTCGCAGAGGCATCACATCGACCCCAATACAGGTCCTTCATACCCTTGCGTGGAAATCTCAGTaGGTACTAGGTCCATCTGAA +
Preference number: 4 (lower is better)
Translates to: KVLRRGITSTPIQVLHTLAWKSQ*VLGPSE
Trigger: TTCAGATGGACCTAGTACCCACTGAGATTTCCACGC...AAGGGTATGAAGGACCTGTATTGGGGTCGATGTGATGCCTCTGCGAAGAACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp ACAGCCAAAATGGGCCGTGGCCATTGCCTCTCCTCACGTTCCCAGCCTTCACCACAGGGCTTAAGGTACTaGATGATATTGTATAAATTG +
Preference number: 4 (lower is better)
Translates to: TAKMGRGHCLSSRSQPSPQGLRY*MILYKL
Trigger: CAATTTATACAATATCATCCAGTACCTTAAGCCCTG...TGGTGAAGGCTGGGAACGTGAGGAGAGGCAATGGCCACGGCCCATTTTGGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp TGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCCAGTATTGGGAGTTaGGGGGTGCGTATCCAAAAT +
Preference number: 4 (lower is better)
Translates to: WKANLCLQAQNIQVEPHEASIGS*GVRIQN
Trigger: ATTTTGGATACGCACCCCCCAACTCCCAATACTGGC...TTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp TCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGGCCAGTATTGGGAGTTaGGGGGTGCGTATCCAAAAT +
Preference number: 4 (lower is better)
Translates to: SGQQHGKRIYVYRHRTSRASIGS*GVRIQN
Trigger: ATTTTGGATACGCACCCCCCAACTCCCAATACTGGC...CCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp ACACGAAGCGGTGCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGTTCCTGCTTTCTTGGTaGAGCGTAAGCACCACTGCA +
Preference number: 4 (lower is better)
Translates to: TRSGAWQLVVGFPKTGVLFLLSW*SVSTTA
Trigger: TGCAGTGGTGCTTACGCTCCACCAAGAAAGCAGGAA...CAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACCGCTTCGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GTCTGGCTTCATACCACAGGTTTCCTGCTTTCTTGGTGGAGCGTAAGCACCACTACTTCTAAAGCAGCTTaGAGGATCTTACCACGTGGA +
Preference number: 4 (lower is better)
Translates to: VWLHTTGFLLSWWSVSTTTSKAA*RILPRG
Trigger: TCCACGTGGTAAGATCCTCCAAGCTGCTTTAGAAGT...AGTGGTGCTTACGCTCCACCAAGAAAGCAGGAAACCTGTGGTATGAAGCCAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GGTCCATCTGAAGTTCCCAACTCTTTTCCTCCCACCAGGTATGCATCATGTGAGCTGGGGCCAAGAGGCTaGGCACATTTACTGTTATTA +
Preference number: 4 (lower is better)
Translates to: GPSEVPNSFPPTRYASCELGPRG*AHLLLL
Trigger: TAATAACAGTAAATGTGCCCAGCCTCTTGGCCCCAG...CTCACATGATGCATACCTGGTGGGAGGAAAAGAGTTGGGAACTTCAGATGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CTGATGCGGAAGTCACCGAAATGTTCACTTCCTCAAGTTCCAGAGGATTCTGTTAATACTGTACAGTTCTaGGGCCAAGAGGCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: LMRKSPKCSLPQVPEDSVNTVQF*GQEAGH
Trigger: GTGCCCAGCCTCTTGGCCCCAGAACTGTACAGTATT...AACAGAATCCTCTGGAACTTGAGGAAGTGAACATTTCGGTGACTTCCGCATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp AGAACATCCAGGTGGAGCCACACGAAGCGGTGCTTGGCAATTAGTGGTCGGATTCCTAATTTTTCCCACTaGGCCAGAGCTACATCTTTA +
Preference number: 4 (lower is better)
Translates to: RTSRWSHTKRCLAISGRIPNFSH*ARATSL
Trigger: TAAAGATGTAGCTCTGGCCCAGTGGGAAAAATTAGG...AATCCGACCACTAATTGCCAAGCACCGCTTCGTGTGGCTCCACCTGGATGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR CAA 72 bp TTTAGTGTACAACGGGCTTGTTTCAGGGGAGCTTGTTaGGGATGCAGACTGTCAAGACCCAACCTGGTATCT +
Preference number: 4 (lower is better)
Translates to: FSVQRACFRGAC*GCRLSRPNLVS
Trigger: AGATACCAGGTTGGGTCTTGACAGTCTGCATCCCAAACAAGCTCCCCTGAAACAAGCCCGTTGTACACTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589955.2
ENST00000678349.1
CDS-3UTR TCA 90 bp GTCTGGCTTCATACCACAGGTTTCCTGCTTTCTTGGTGGAGCGTAAGCACCACTTTGGCAGTAAATAGCTaGTTCGACGTTTTGCCTGAA +
Preference number: 4 (lower is better)
Translates to: VWLHTTGFLLSWWSVSTTLAVNS*FDVLPE
Trigger: TTCAGGCAAAACGTCGAATCAGCTATTTACTGCCAA...AGTGGTGCTTACGCTCCACCAAGAAAGCAGGAAACCTGTGGTATGAAGCCAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp GCCACACGAAGCGGTGCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGGCAGTAAATAGCTaGTTCGACGTTTTGCCTGAA +
Preference number: 4 (lower is better)
Translates to: ATRSGAWQLVVGFPKTGVLAVNS*FDVLPE
Trigger: TTCAGGCAAAACGTCGAATCAGCTATTTACTGCCAA...AACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACCGCTTCGTGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp CTCTGGGTAACTCTAGCCTTCCTGATGCGGAAGTCACCGAAATGTTCACTTCCTGCAAAGAAATGCAAGTaGATGAACACCTTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: LWVTLAFLMRKSPKCSLPAKKCK*MNTFSP
Trigger: TGGGGAGAAGGTGTTCATTCACTTGCATTTCTTTGC...AGGAAGTGAACATTTCGGTGACTTCCGCATCAGGAAGGCTAGAGTTACCCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp TCTAAAGCAGCTTGGAGGATCTTACCACGTGGAGCATACTGCAAACTGACTCCAGGTACTAGGTCCATCTaGAGTTCCCAACTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: SKAAWRILPRGAYCKLTPGTRSI*SSQLFS
Trigger: GGAAAAGAGTTGGGAACTTCAGATGGACCTAGTACC...TGGAGTCAGTTTGCAGTATGCTCCACGTGGTAAGATCCTCCAAGCTGCTTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp ATACCCATTAGACATATCCAGCTTGAAATTTATACCATTGCACTGCCAAACGGAACCACACTGCCCTGTTaGTCATCCCTGGAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: IPIRHIQLEIYTIALPNGTTLPC*SSLEEA
Trigger: GGCCTCCTCCAGGGATGATCAACAGGGCAGTGTGGT...TCCGTTTGGCAGTGCAATGGTATAAATTTCAAGCTGGATATGTCTAATGGGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp CAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACTTGACAGTGGAATTCTaGGCTCCATCAGCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: QHGKRIYVYRHRTSRWSHLTVEF*APSASR
Trigger: TCTGGAAGCTGATGGAGCTCAGAATTCCACTGTCAA...GTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp GGGACTGGGAGGGCCGAGGAGGTTCTCAGATGTTCTTCTCCTTTTGGGGCTTTTCACAGCATTAAACATTaGACAGAGTACATTCCAAAG +
Preference number: 4 (lower is better)
Translates to: GTGRAEEVLRCSSPFGAFHSIKH*TEYIPK
Trigger: CTTTGGAATGTACTCTGTTCAATGTTTAATGCTGTG...AAAAGCCCCAAAAGGAGAAGAACATCTGAGAACCTCCTCGGCCCTCCCAGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp AAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGGCTGACTCCATTAAAATaGTTTTGGCAGGATAGCAGC +
Preference number: 4 (lower is better)
Translates to: KRIYVYRHRTSRWSHTKRLTPLK*FWQDSS
Trigger: GCTGCTATCCTGCCAAAATCATTTTAATGGAGTCAG...CCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp GCCACACGAAGCGGTGCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTCTGACTCCATTAAAATaGTTTTGGCAGGATAGCAGC +
Preference number: 4 (lower is better)
Translates to: ATRSGAWQLVVGFPKTGVLTPLK*FWQDSS
Trigger: GCTGCTATCCTGCCAAAATCATTTTAATGGAGTCAG...AACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACCGCTTCGTGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp CTGCCAAATCTTCGGAGACGACCCGATGGCCATAGACCCTGTCAGCTGTCATTCTCTGTGAATCCCGTTTaGACAACAACAAAAGACAAA +
Preference number: 4 (lower is better)
Translates to: LPNLRRRPDGHRPCQLSFSVNPV*TTTKDK
Trigger: TTTGTCTTTTGTTGTTGTTCAAACGGGATTCACAGA...GAATGACAGCTGACAGGGTCTATGGCCATCGGGTCGTCTCCGAAGATTTGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp GGTCCATCTGAAGTTCCCAACTCTTTTCCTCCCACCAGGTATGCATCATGTGAGAATAGATCCTGGAGGTaGAAGCTAGACATGTGTTGG +
Preference number: 4 (lower is better)
Translates to: GPSEVPNSFPPTRYASCENRSWR*KLDMCW
Trigger: CCAACACATGTCTAGCTTTCACCTCCAGGATCTATT...CTCACATGATGCATACCTGGTGGGAGGAAAAGAGTTGGGAACTTCAGATGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp AAGGTTCTTCGCAGAGGCATCACATCGACCCCAATACAGGTCCTTCATACCCTTAATAGATCCTGGAGGTaGAAGCTAGACATGTGTTGG +
Preference number: 4 (lower is better)
Translates to: KVLRRGITSTPIQVLHTLNRSWR*KLDMCW
Trigger: CCAACACATGTCTAGCTTTCACCTCCAGGATCTATT...AAGGGTATGAAGGACCTGTATTGGGGTCGATGTGATGCCTCTGCGAAGAACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp GTGATACATGTCTTAAGAAGGGTCGTGGCTCCCATGCTCCACGTGAAAACGGGCGAGATGCATATTTCATaGTTGTCCAAGGTCATGGTT +
Preference number: 4 (lower is better)
Translates to: VIHVLRRVVAPMLHVKTGEMHIS*LSKVMV
Trigger: AACCATGACCTTGGACAATCATGAAATATGCATCTC...GCCCGTTTTCACGTGGAGCATGGGAGCCACGACCCTTCTTAAGACATGTATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp GTCTGGCTTCATACCACAGGTTTCCTGCTTTCTTGGTGGAGCGTAAGCACCACTCATTCATGCTCCATCTaGTTTTCTTTGCATCCAGTG +
Preference number: 4 (lower is better)
Translates to: VWLHTTGFLLSWWSVSTTHSCSI*FSLHPV
Trigger: CACTGGATGCAAAGAAAATCAGATGGAGCATGAATG...AGTGGTGCTTACGCTCCACCAAGAAAGCAGGAAACCTGTGGTATGAAGCCAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp TCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTTTCCCTGTACACACTaGGTGAAAGCAGGGCATACA +
Preference number: 4 (lower is better)
Translates to: SGQQHGKRIYVYRHRTSRFPCTH*VKAGHT
Trigger: TGTATGCCCTGCTTTCACTCAGTGTGTACAGGGAAA...CCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398117.1
CDS-3UTR TCA 90 bp GAAGGGGTACCATTTACCACCACATCCTACTGGATTACAAACGCTAGATCTTTGAGCAAAGCCATAGCCTaGTACTCCTCAGGACACCTC +
Preference number: 4 (lower is better)
Translates to: EGVPFTTTSYWITNARSLSKAIA*YSSGHL
Trigger: GAGGTGTCCTGAGGAGTATCAGGCTATGGCTTTGCT...CAAAGATCTAGCGTTTGTAATCCAGTAGGATGTGGTGGTAAATGGTACCCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR TCA 90 bp CACAGTTCCCAGTTTAGAGGGTCACTCTCCATCACCTGCCCAAAACTCAATCCCTGCAAATTCTGTCACTaGCAAGGTAGCAAAGCCATA +
Preference number: 4 (lower is better)
Translates to: HSSQFRGSLSITCPKLNPCKFCH*QGSKAI
Trigger: TATGGCTTTGCTACCTTGTCAGTGACAGAATTTGCA...GGGATTGAGTTTTGGGCAGGTGATGGAGAGTGACCCTCTAAACTGGGAACTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR TCA 90 bp CACAGTTCCCAGTTTAGAGGGTCACTCTCCATCACCTGCCCAAAACTCAATCCCCTCCATTACAATCCTTaGCTCTTAGGAACTAAACCC +
Preference number: 4 (lower is better)
Translates to: HSSQFRGSLSITCPKLNPLHYNP*LLGTKP
Trigger: GGGTTTAGTTCCTAAGAGTCAAGGATTGTAATGGAG...GGGATTGAGTTTTGGGCAGGTGATGGAGAGTGACCCTCTAAACTGGGAACTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR GCA 90 bp GTTATGGAACACAAAAGTCAAACAGATTTCCTCAGCCTCACAAGGTTCCAATTTGTGAAGGGCGTCAGGTaGAGCTGGCTGGACATCTCG +
Preference number: 4 (lower is better)
Translates to: VMEHKSQTDFLSLTRFQFVKGVR*SWLDIS
Trigger: CGAGATGTCCAGCCAGCTGCACCTGACGCCCTTCAC...AAATTGGAACCTTGTGAGGCTGAGGAAATCTGTTTGACTTTTGTGTTCCATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR GCA 90 bp CACAATGCCTTATTCAGACCTAGGAATAAATCCACACTCCACTCTACAGCCAATATCCAGGTGTGCAGGTaGCGGTTCAGGTACTCAGTC +
Preference number: 4 (lower is better)
Translates to: HNALFRPRNKSTLHSTANIQVCR*RFRYSV
Trigger: GACTGAGTACCTGAACCGGCACCTGCACACCTGGAT...ATTGGCTGTAGAGTGGAGTGTGGATTTATTCCTAGGTCTGAATAAGGCATTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR GCA 90 bp AACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCGCCACACCCCTCTACTaGTCTTTCTTGACAGTGGAA +
Preference number: 4 (lower is better)
Translates to: NNMESESMFTGTEHPGGAATPLY*SFLTVE
Trigger: TTCCACTGTCAAGAAAGAGCAGTAGAGGGGTGTGGC...GGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp ATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACGCCACACCCCTCTACTaGTCTTTCTTGACAGTGGAA +
Preference number: 4 (lower is better)
Translates to: MVIRPTTWKANLCLQAQNATPLY*SFLTVE
Trigger: TTCCACTGTCAAGAAAGAGCAGTAGAGGGGTGTGGC...GTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp GTCTGGCTTCATACCACAGGTTTCCTGCTTTCTTGGTGGAGCGTAAGCACCACTCCACGTGGAGCATACTaGAAACTGACTCCATTAAAA +
Preference number: 4 (lower is better)
Translates to: VWLHTTGFLLSWWSVSTTPRGAY*KLTPLK
Trigger: TTTTAATGGAGTCAGTTTGCAGTATGCTCCACGTGG...AGTGGTGCTTACGCTCCACCAAGAAAGCAGGAAACCTGTGGTATGAAGCCAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp GTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCAGAGTTTTCTGCCCCTaGCAAATCTTCGGAGACGAC +
Preference number: 4 (lower is better)
Translates to: VIRPTTWKANLCLQAQNIRVFCP*QIFGDD
Trigger: GTCGTCTCCGAAGATTTGGCAGGGGCAGAAAACTCT...GATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp TTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGGTGCTTGGCAATTATTTATACCATTGCACTaGCAAACGGAGCTGCACTTT +
Preference number: 4 (lower is better)
Translates to: FTGTEHPGGATRSGAWQLFIPLH*QTELHF
Trigger: AAAGTGCAGCTCCGTTTGGCAGTGCAATGGTATAAA...TAATTGCCAAGCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp CCCAGGGCCTCTGTTCCTTCCCTCTACAGTGATACATGTCTTAAGAAGGGTCGTTTTATACCATTGCACTaGCAAACGGAGCTGCACTTT +
Preference number: 4 (lower is better)
Translates to: PRASVPSLYSDTCLKKGRFIPLH*QTELHF
Trigger: AAAGTGCAGCTCCGTTTGGCAGTGCAATGGTATAAA...ACGACCCTTCTTAAGACATGTATCACTGTAGAGGGAAGGAACAGAGGCCCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp CATCCGTCTGCTCTTCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTAGTGCTCAGCTTGGTATaGAGAACAACCTTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: HPSALQMVIRPTTWKANLVLSLV*RTTLLL
Trigger: CAACAACAAGGTTGTTCTGCATACCAAGCTGAGCAC...TAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGAAGAGCAGACGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp TGGGTACTAGGTCCATCTGAAGTTCCCAACTCTTTTCCTCCCACCAGGTATGCATGTTCCCATCTTCTGTaGTCAGCTTGGTATGCAGAA +
Preference number: 4 (lower is better)
Translates to: WVLGPSEVPNSFPPTRYACSHLL*SAWYAE
Trigger: TTCTGCATACCAAGCTGAGCACAGAAGATGGGAACA...TGCATACCTGGTGGGAGGAAAAGAGTTGGGAACTTCAGATGGACCTAGTACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp AAGGTTCTTCGCAGAGGCATCACATCGACCCCAATACAGGTCCTTCATACCCTTATCCACTGTCACTCTTaGAAATTCTACCTTGGAGGG +
Preference number: 4 (lower is better)
Translates to: KVLRRGITSTPIQVLHTLIHCHS*KFYLGG
Trigger: CCCTCCAAGGTAGAATTTGCAAGAGTGACAGTGGAT...AAGGGTATGAAGGACCTGTATTGGGGTCGATGTGATGCCTCTGCGAAGAACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CGAAGCGGTGCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGATGCTGGTGTTTCCCCCTTaGCATGAGATGCAGGAAATT +
Preference number: 4 (lower is better)
Translates to: RSGAWQLVVGFPKTGVLMLVFPP*HEMQEI
Trigger: AATTTCCTGCATCTCATGCCAAGGGGGAAACACCAG...CATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACCGCTTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333681.5
ENST00000398117.1
CDS-3UTR CCA 90 bp ATAGCTGATTCGACGTTTTGCCTGAAGACTGTTAATTGTTGTGTGTGTGTGTGTACAGAGGCCGCATGCTaGGGCCGTACAGTTCCACAA +
Preference number: 4 (lower is better)
Translates to: IADSTFCLKTVNCCVCVCTEAAC*GRTVPQ
Trigger: TTGTGGAACTGTACGGCCCCAGCATGCGGCCTCTGT...ACACACACACACACAACAATTAACAGTCTTCAGGCAAAACGTCGAATCAGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GTGATACATGTCTTAAGAAGGGTCGTGGCTCCCATGCTCCACGTGAAAACGGGCATCCGGCCAACAACATaGAAAGCGAATCTATGTTTA +
Preference number: 4 (lower is better)
Translates to: VIHVLRRVVAPMLHVKTGIRPTT*KANLCL
Trigger: TAAACATAGATTCGCTTTCCATGTTGTTGGCCGGAT...GCCCGTTTTCACGTGGAGCATGGGAGCCACGACCCTTCTTAAGACATGTATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CCTCCCACCAGGTATGCATCATGTGAGTCATATGCAAAGAGTCTCTTCTTCAGGGCGTGGAAATCTCAGTaGGTACTAGGTCCATCTGAA +
Preference number: 4 (lower is better)
Translates to: PPTRYASCESYAKSLFFRAWKSQ*VLGPSE
Trigger: TTCAGATGGACCTAGTACCCACTGAGATTTCCACGC...CCTGAAGAAGAGACTCTTTGCATATGACTCACATGATGCATACCTGGTGGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CGAAGCGGTGCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGATGGCGTGGAAATCTCAGTaGGTACTAGGTCCATCTGAA +
Preference number: 4 (lower is better)
Translates to: RSGAWQLVVGFPKTGVLMAWKSQ*VLGPSE
Trigger: TTCAGATGGACCTAGTACCCACTGAGATTTCCACGC...CATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACCGCTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp AACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCGCCAGTATTGGGAGTTaGGGGGTGCGTATCCAAAAT +
Preference number: 4 (lower is better)
Translates to: NNMESESMFTGTEHPGGAASIGS*GVRIQN
Trigger: ATTTTGGATACGCACCCCCCAACTCCCAATACTGGC...GGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CCCAGGGACGAGGAAACCTTCAAGAAACAAGGTCAAAGGGACAACAGATATAACGCCAGTATTGGGAGTTaGGGGGTGCGTATCCAAAAT +
Preference number: 4 (lower is better)
Translates to: PRDEETFKKQGQRDNRYNASIGS*GVRIQN
Trigger: ATTTTGGATACGCACCCCCCAACTCCCAATACTGGC...GTTATATCTGTTGTCCCTTTGACCTTGTTTCTTGAAGGTTTCCTCGTCCCTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp TTCTACTGCTTTAGTGAACCTTTTGCATATTTGTTTGGGGCAGGCATGTTGACTGGCGGCCTGATGCTCTaGGTAACTCTAGCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: FYCFSEPFAYLFGAGMLTGGLML*VTLAFL
Trigger: CAGGAAGGCTAGAGTTACCCAGAGCATCAGGCCGCC...AGTCAACATGCCTGCCCCAAACAAATATGCAAAAGGTTCACTAAAGCAGTAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp ATAGCTGATTCGACGTTTTGCCTGAAGACTGTTAATTGTTGTGTGTGTGTGTGTAGCCAAAATGGGCCGTaGCCATTGCCTCTCCTCACG +
Preference number: 4 (lower is better)
Translates to: IADSTFCLKTVNCCVCVCSQNGP*PLPLLT
Trigger: CGTGAGGAGAGGCAATGGCCACGGCCCATTTTGGCT...ACACACACACACACAACAATTAACAGTCTTCAGGCAAAACGTCGAATCAGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp TCCATGACACCTCACTTCAATGCTTCTTTTAGGATTTGTGACCCTCTCCAAAGTGTGCTACAGCCAAAATaGGCCGTGGCCATTGCCTCT +
Preference number: 4 (lower is better)
Translates to: SMTPHFNASFRICDPLQSVLQPK*AVAIAS
Trigger: AGAGGCAATGGCCACGGCCCATTTTGGCTGTAGCAC...ACTTTGGAGAGGGTCACAAATCCTAAAAGAAGCATTGAAGTGAGGTGTCATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACAACAAAGCTCCTCAGTaGCCAGTGACATCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: QHGKRIYVYRHRTSRWSHNKAPQ*PVTSRF
Trigger: AAACCTGGATGTCACTGGCCACTGAGGAGCTTTGTT...GTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GTGAGATGCATATTTCATGATTGTCCAAGGTCATGGTTGTCCAAAGACATGGAACAGGAGGGCTCTGGGTaGGTCTGTGTTGAAACAGGC +
Preference number: 4 (lower is better)
Translates to: VRCIFHDCPRSWLSKDMEQEGSG*VCVETG
Trigger: GCCTGTTTCAACACAGACCCACCCAGAGCCCTCCTG...TTCCATGTCTTTGGACAACCATGACCTTGGACAATCATGAAATATGCATCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CTTCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCATTCCTGCTTTCTTGGTaGAGCGTAAGCACCACTGCA +
Preference number: 4 (lower is better)
Translates to: LQMVIRPTTWKANLCLQAFLLSW*SVSTTA
Trigger: TGCAGTGGTGCTTACGCTCCACCAAGAAAGCAGGAA...TGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CCCAGGGACGAGGAAACCTTCAAGAAACAAGGTCAAAGGGACAACAGATATAACTTCCTGCTTTCTTGGTaGAGCGTAAGCACCACTGCA +
Preference number: 4 (lower is better)
Translates to: PRDEETFKKQGQRDNRYNFLLSW*SVSTTA
Trigger: TGCAGTGGTGCTTACGCTCCACCAAGAAAGCAGGAA...GTTATATCTGTTGTCCCTTTGACCTTGTTTCTTGAAGGTTTCCTCGTCCCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp TCTAAAGCAGCTTGGAGGATCTTACCACGTGGAGCATACTGCAAACTGACTCCAGAGGATCTTACCACGTaGAGCATACTGCAAACTGAC +
Preference number: 4 (lower is better)
Translates to: SKAAWRILPRGAYCKLTPEDLTT*SILQTD
Trigger: GTCAGTTTGCAGTATGCTCCACGTGGTAAGATCCTC...TGGAGTCAGTTTGCAGTATGCTCCACGTGGTAAGATCCTCCAAGCTGCTTTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CACAATGCCTTATTCAGACCTAGGAATAAATCCACACTCCACTCTACAGCCAATGGTCCTGGGGACTCCTaGACCTTCAGCTTGAGAAAC +
Preference number: 4 (lower is better)
Translates to: HNALFRPRNKSTLHSTANGPGDS*TFSLRN
Trigger: GTTTCTCAAGCTGAAGGTCCAGGAGTCCCCAGGACC...ATTGGCTGTAGAGTGGAGTGTGGATTTATTCCTAGGTCTGAATAAGGCATTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR CCA 90 bp GTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCAAAGGCATCCTGGCCTaGAACCCTGGGATTCATTTG +
Preference number: 4 (lower is better)
Translates to: VIRPTTWKANLCLQAQNIKGILA*NPGIHL
Trigger: CAAATGAATCCCAGGGTTCCAGGCCAGGATGCCTTT...GATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678301.1
CDS-3UTR TCA 90 bp ACGTTTTGCCTGAAGACTGTTAATTGTTGTGTGTGTGTGTGTCTGTCTGTGTGTAGCGGCGGCGGCAGATaGATTACAATTTTCAGTCCG +
Preference number: 4 (lower is better)
Translates to: TFCLKTVNCCVCVCLSVCSGGGR*ITIFSP
Trigger: CGGACTGAAAATTGTAATTCATCTGCCGCCGCCGCT...ACACACAGACAGACACACACACACACAACAATTAACAGTCTTCAGGCAAAACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333681.5
ENST00000398117.1
CDS-3UTR TCA 90 bp GTAGCTGAGACTCAGGGCTTATCTCACCTTCTCAGAATGCTTTTGAAGAATCAAAGCGGCGGCGGCAGATaGATTACAATTTTCAGTCCG +
Preference number: 4 (lower is better)
Translates to: VAETQGLSHLLRMLLKNQSGGGR*ITIFSP
Trigger: CGGACTGAAAATTGTAATTCATCTGCCGCCGCCGCT...TTGATTCTTCAAAAGCATTCTGAGAAGGTGAGATAAGCCCTGAGTCTCAGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333681.5
ENST00000398117.1
CDS-3UTR TCA 90 bp GCCACACGAAGCGGTGCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTATTCGACGTTTTGCCTaGAGACTGTTAATTGTTGTG +
Preference number: 4 (lower is better)
Translates to: ATRSGAWQLVVGFPKTGVIRRFA*RLLIVV
Trigger: CACAACAATTAACAGTCTTCAGGCAAAACGTCGAAT...AACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACCGCTTCGTGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp GATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAAGGTACTAGGTCCATCTaGAGTTCCCAACTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: DGDPANNMESESMFTGTEGTRSI*SSQLFS
Trigger: GGAAAAGAGTTGGGAACTTCAGATGGACCTAGTACC...TTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp CTGTCACTCTTGCAAATTCTACCTTGGAGGGAAAAACTTAATGAAATGAGCTATCTCCCATGCTCCACGTaGAAACGGGCCTACCTGGAG +
Preference number: 4 (lower is better)
Translates to: LSLLQILPWREKLNEMSYLPCST*KRAYLE
Trigger: CTCCAGGTAGGCCCGTTTTCACGTGGAGCATGGGAG...ATAGCTCATTTCATTAAGTTTTTCCCTCCAAGGTAGAATTTGCAAGAGTGACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp GATTTAAGGGCATTTTTCCCATCGCTGTCCTTCGGCGTGGAAATCTCAGTGGGTGGGTCAATTAATCCATaGCACCTCACTTCAATGCTT +
Preference number: 4 (lower is better)
Translates to: DLRAFFPSLSFGVEISVGGSINP*HLTSML
Trigger: AAGCATTGAAGTGAGGTGTCATGGATTAATTGACCC...ACCCACTGAGATTTCCACGCCGAAGGACAGCGATGGGAAAAATGCCCTTAAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp AGAACATCCAGGTGGAGCCACACGAAGCGGTGCTTGGCAATTAGTGGTCGGATTCACAGCATTAAACATTaGACAGAGTACATTCCAAAG +
Preference number: 4 (lower is better)
Translates to: RTSRWSHTKRCLAISGRIHSIKH*TEYIPK
Trigger: CTTTGGAATGTACTCTGTTCAATGTTTAATGCTGTG...AATCCGACCACTAATTGCCAAGCACCGCTTCGTGTGGCTCCACCTGGATGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp GGCCATAGACCCTGTCAGCTGTCATTCTGGCCTCTCTTGCGGAGTATTTGTGCACACAGCATTAAACATTaGACAGAGTACATTCCAAAG +
Preference number: 4 (lower is better)
Translates to: GHRPCQLSFWPLLRSICAHSIKH*TEYIPK
Trigger: CTTTGGAATGTACTCTGTTCAATGTTTAATGCTGTG...TGCACAAATACTCCGCAAGAGAGGCCAGAATGACAGCTGACAGGGTCTATGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp CCACCAGTGTTCCCATCTTCTGTGCTCAGCTTGGTATGCAGAACAACCTTGTTGCTGACTCCATTAAAATaGTTTTGGCAGGATAGCAGC +
Preference number: 4 (lower is better)
Translates to: PPVFPSSVLSLVCRTTLLLTPLK*FWQDSS
Trigger: GCTGCTATCCTGCCAAAATCATTTTAATGGAGTCAG...CAACAAGGTTGTTCTGCATACCAAGCTGAGCACAGAAGATGGGAACACTGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp CAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACCACTTTGAGCCATGCTaGTGTCTCTGGAATCTAAAG +
Preference number: 4 (lower is better)
Translates to: QHGKRIYVYRHRTSRWSHHFEPC*CLWNLK
Trigger: CTTTAGATTCCAGAGACATCAGCATGGCTCAAAGTG...GTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp ATGCATCATGTGAGTCATATGCAAAGAGTCTCTTCTTCAGGCCAGGGAGGCATGCACTTTGAGCCATGCTaGTGTCTCTGGAATCTAAAG +
Preference number: 4 (lower is better)
Translates to: MHHVSHMQRVSSSGQGGMHFEPC*CLWNLK
Trigger: CTTTAGATTCCAGAGACATCAGCATGGCTCAAAGTG...CATGCCTCCCTGGCCTGAAGAAGAGACTCTTTGCATATGACTCACATGATGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp TCCATGACACCTCACTTCAATGCTTCTTTTAGGATTTGTGACCCTCTCCAAAGTAACGGAGCTGCACTTTaGGCCATGCTGATGTCTCTG +
Preference number: 4 (lower is better)
Translates to: SMTPHFNASFRICDPLQSNGAAL*AMLMSL
Trigger: CAGAGACATCAGCATGGCTCAAAGTGCAGCTCCGTT...ACTTTGGAGAGGGTCACAAATCCTAAAAGAAGCATTGAAGTGAGGTGTCATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp GTCTGGCTTCATACCACAGGTTTCCTGCTTTCTTGGTGGAGCGTAAGCACCACTGAGATGCATATTTCATaGTTGTCCAAGGTCATGGTT +
Preference number: 4 (lower is better)
Translates to: VWLHTTGFLLSWWSVSTTEMHIS*LSKVMV
Trigger: AACCATGACCTTGGACAATCATGAAATATGCATCTC...AGTGGTGCTTACGCTCCACCAAGAAAGCAGGAAACCTGTGGTATGAAGCCAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp TTTAAGGGCATTTTTCCCATCGCTGTCCTTCGGCGTGGAAATCTCAGTGGGTACGTCTCAGAATTTTCTTaGTTGAGCGAGCCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: FKGIFPIAVLRRGNLSGYVSEFS*LSEPFH
Trigger: ATGGAAAGGCTCGCTCAATCAAGAAAATTCTGAGAC...GTACCCACTGAGATTTCCACGCCGAAGGACAGCGATGGGAAAAATGCCCTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp CTCTGGGTAACTCTAGCCTTCCTGATGCGGAAGTCACCGAAATGTTCACTTCCTGTCTCAGAATTTTCTTaGTTGAGCGAGCCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: LWVTLAFLMRKSPKCSLPVSEFS*LSEPFH
Trigger: ATGGAAAGGCTCGCTCAATCAAGAAAATTCTGAGAC...AGGAAGTGAACATTTCGGTGACTTCCGCATCAGGAAGGCTAGAGTTACCCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp AAGGTTCTTCGCAGAGGCATCACATCGACCCCAATACAGGTCCTTCATACCCTTACTCTTCCCTTCTCCTaGGATCAAACTCTAGAACTA +
Preference number: 4 (lower is better)
Translates to: KVLRRGITSTPIQVLHTLTLPFS*DQTLEL
Trigger: TAGTTCTAGAGTTTGATCTCAGGAGAAGGGAAGAGT...AAGGGTATGAAGGACCTGTATTGGGGTCGATGTGATGCCTCTGCGAAGAACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678134.1
CDS-3UTR GCA 90 bp AATGCAATCCACTGTCACTCTTGCAAATTCTACCTTGGAGGGAAAAACTTAATGTCCTGGATCCAGGTGTaGAGGTGCCGGTTCAGGTAC +
Preference number: 4 (lower is better)
Translates to: NAIHCHSCKFYLGGKNLMSWIQV*RCRFRY
Trigger: GTACCTGAACCGGCACCTGCACACCTGGATCCAGGA...CATTAAGTTTTTCCCTCCAAGGTAGAATTTGCAAGAGTGACAGTGGATTGCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR GCA 90 bp GCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGATGGGACTGTCTTAAATAGCCACACGAAGCGGTaGTTGGCAATTAGTGGTCGG +
Preference number: 4 (lower is better)
Translates to: AISGRISKDRSFDGTVLNSHTKR*LAISGR
Trigger: CCGACCACTAATTGCCAAGCACCGCTTCGTGTGGCT...ATTTAAGACAGTCCCATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp GTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCTTTTTCCATCCGTCTaGTCTTCAGATGGTGATCCG +
Preference number: 4 (lower is better)
Translates to: VIRPTTWKANLCLQAQNILFPSV*SSDGDP
Trigger: CGGATCACCATCTGAAGAGCAGACGGATGGAAAAAG...GATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp CCAACTCTTTTCCTCCCACCAGGTATGCATCATGTGAGTCATATGCAAAGAGTCCTTTTTCCATCCGTCTaGTCTTCAGATGGTGATCCG +
Preference number: 4 (lower is better)
Translates to: PTLFLPPGMHHVSHMQRVLFPSV*SSDGDP
Trigger: CGGATCACCATCTGAAGAGCAGACGGATGGAAAAAG...GACTCTTTGCATATGACTCACATGATGCATACCTGGTGGGAGGAAAAGAGTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp AGACATATCCAGCTTGAAATTTATACCATTGCACTGCCAAACGGAGCTGCACTTATTCGGAGACCACACTaGCCTGTTGATCATCCCTGG +
Preference number: 4 (lower is better)
Translates to: RHIQLEIYTIALPNGAALIRRPH*PVDHPW
Trigger: CCAGGGATGATCAACAGGGCAGTGTGGTCTCCGAAT...AAGTGCAGCTCCGTTTGGCAGTGCAATGGTATAAATTTCAAGCTGGATATGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp TTTTTAGAGCCCTTGTCCCCAATTTGGAAAGTGCATATACTCTATTTAACTCTGATGGGCCGTGGCCATTaGCTCTCCTCACGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: FLEPLSPIWKVHILYLTLMGRGH*LSSRSQ
Trigger: CTGGGAACGTGAGGAGAGGCAATGGCCACGGCCCAT...CAGAGTTAAATAGAGTATATGCACTTTCCAAATTGGGGACAAGGGCTCTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp AAACAGCCTGCAGCTTTGTTTCATGGTACATCACTGACAATGCATATTATTTCTATGGGCCGTGGCCATTaGCTCTCCTCACGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: KQPAALFHGTSLTMHIISMGRGH*LSSRSQ
Trigger: CTGGGAACGTGAGGAGAGGCAATGGCCACGGCCCAT...AGAAATAATATGCATTGTCAGTGATGTACCATGAAACAAAGCTGCAGGCTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp CTCTGGGTAACTCTAGCCTTCCTGATGCGGAAGTCACCGAAATGTTCACTTCCTCCACGTGGAGCATACTaGAAACTGACTCCATTAAAA +
Preference number: 4 (lower is better)
Translates to: LWVTLAFLMRKSPKCSLPPRGAY*KLTPLK
Trigger: TTTTAATGGAGTCAGTTTGCAGTATGCTCCACGTGG...AGGAAGTGAACATTTCGGTGACTTCCGCATCAGGAAGGCTAGAGTTACCCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp TTTAAGGGCATTTTTCCCATCGCTGTCCTTCGGCGTGGAAATCTCAGTGGGTACCCACGTGGAGCATACTaGAAACTGACTCCATTAAAA +
Preference number: 4 (lower is better)
Translates to: FKGIFPIAVLRRGNLSGYPRGAY*KLTPLK
Trigger: TTTTAATGGAGTCAGTTTGCAGTATGCTCCACGTGG...GTACCCACTGAGATTTCCACGCCGAAGGACAGCGATGGGAAAAATGCCCTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp GATTTAAGGGCATTTTTCCCATCGCTGTCCTTCGGCGTGGAAATCTCAGTGGGTCCACGTGGAGCATACTaGAAACTGACTCCATTAAAA +
Preference number: 4 (lower is better)
Translates to: DLRAFFPSLSFGVEISVGPRGAY*KLTPLK
Trigger: TTTTAATGGAGTCAGTTTGCAGTATGCTCCACGTGG...ACCCACTGAGATTTCCACGCCGAAGGACAGCGATGGGAAAAATGCCCTTAAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp GGGTGCGTATCCAAAATATATGAATATACACAATCAGGGCTTAAGGTACTGGATCTTGCGGAGTATTTGTaGAGCGAGGGACTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: GCVSKIYEYTQSGLKVLDLAEYL*SEGLGG
Trigger: CCCTCCCAGTCCCTCGCTGCACAAATACTCCGCAAG...ATCCAGTACCTTAAGCCCTGATTGTGTATATTCATATATTTTGGATACGCACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp TCGACGTTTTGCCTGAAGACTGTTAATTGTTGTGTGTGTGTGTGTCTGTCTGTGAGAGTTTTCTGCCCCTaGCAAATCTTCGGAGACGAC +
Preference number: 4 (lower is better)
Translates to: STFCLKTVNCCVCVCLSVRVFCP*QIFGDD
Trigger: GTCGTCTCCGAAGATTTGGCAGGGGCAGAAAACTCT...CACAGACAGACACACACACACACAACAATTAACAGTCTTCAGGCAAAACGTCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp TCCATGACACCTCACTTCAATGCTTCTTTTAGGATTTGTGACCCTCTCCAAAGTCCTGCCAGAGTTTTCTaGCCCTGCCAAATCTTCGGA +
Preference number: 4 (lower is better)
Translates to: SMTPHFNASFRICDPLQSPARVF*PCQIFG
Trigger: TCCGAAGATTTGGCAGGGGCAGAAAACTCTGGCAGG...ACTTTGGAGAGGGTCACAAATCCTAAAAGAAGCATTGAAGTGAGGTGTCATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp TCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGTTCCCATCTTCTGTaGTCAGCTTGGTATGCAGAA +
Preference number: 4 (lower is better)
Translates to: SGQQHGKRIYVYRHRTSRCSHLL*SAWYAE
Trigger: TTCTGCATACCAAGCTGAGCACAGAAGATGGGAACA...CCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp TGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAATGTTCCCATCTTCTGTaGTCAGCTTGGTATGCAGAA +
Preference number: 4 (lower is better)
Translates to: WKANLCLQAQNIQVEPHECSHLL*SAWYAE
Trigger: TTCTGCATACCAAGCTGAGCACAGAAGATGGGAACA...TTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp TGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAATCCACTGTCACTCTTaGAAATTCTACCTTGGAGGG +
Preference number: 4 (lower is better)
Translates to: WKANLCLQAQNIQVEPHEIHCHS*KFYLGG
Trigger: CCCTCCAAGGTAGAATTTGCAAGAGTGACAGTGGAT...TTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACTTTCCGAAAAGCTGCTaGATAAATGAAGGCAGGACG +
Preference number: 4 (lower is better)
Translates to: QHGKRIYVYRHRTSRWSHFPKSC*INEGRT
Trigger: CGTCCTGCCTTCATTTATCCAGCAGCTTTTCGGAAA...GTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333681.5
ENST00000398117.1
CDS-3UTR CCA 90 bp ATGCATATTATTTCTACTGCTTTAGTGAACCTTTTGCATATTTGTTTGGGGCAGGGCGTCAGGTGCAGCTaGCTGGACATCTCGGCGAAG +
Preference number: 4 (lower is better)
Translates to: MHIISTALVNLLHICLGQGVRCS*LDISAK
Trigger: CTTCGCCGAGATGTCCAGCCAGCTGCACCTGACGCC...CTGCCCCAAACAAATATGCAAAAGGTTCACTAAAGCAGTAGAAATAATATGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CCA 90 bp ACAGCCTGCAGCTTTGTTTCATGGTACATCACTGACAATGCATATTATTTCTACACAGAGGCCGCATGCTaGGGCCGTACAGTTCCACAA +
Preference number: 4 (lower is better)
Translates to: TACSFVSWYITDNAYYFYTEAAC*GRTVPQ
Trigger: TTGTGGAACTGTACGGCCCCAGCATGCGGCCTCTGT...GTAGAAATAATATGCATTGTCAGTGATGTACCATGAAACAAAGCTGCAGGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCACACGAAGCGGTGCTTaGCAATTAGTGGTCGGATTT +
Preference number: 4 (lower is better)
Translates to: VIRPTTWKANLCLQAQNITRSGA*QLVVGF
Trigger: AAATCCGACCACTAATTGCCAAGCACCGCTTCGTGT...GATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CAGCCTGCAGCTTTGTTTCATGGTACATCACTGACAATGCATATTATTTCTACTCACAGAACATCCAGGTaGAGCCACACGAAGCGGTGC +
Preference number: 4 (lower is better)
Translates to: QPAALFHGTSLTMHIISTHRTSR*SHTKRC
Trigger: GCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTG...AGTAGAAATAATATGCATTGTCAGTGATGTACCATGAAACAAAGCTGCAGGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp AAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGGATCCGGCCAACAACATaGAAAGCGAATCTATGTTTA +
Preference number: 4 (lower is better)
Translates to: KRIYVYRHRTSRWSHTKRIRPTT*KANLCL
Trigger: TAAACATAGATTCGCTTTCCATGTTGTTGGCCGGAT...CCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGATGGGACTGTCTGCGTGGAAATCTCAGTaGGTACTAGGTCCATCTGAA +
Preference number: 4 (lower is better)
Translates to: AWQLVVGFPKTGVLMGLSAWKSQ*VLGPSE
Trigger: TTCAGATGGACCTAGTACCCACTGAGATTTCCACGC...AGACAGTCCCATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CCAACTCTTTTCCTCCCACCAGGTATGCATCATGTGAGTCATATGCAAAGAGTCAACAAAGCTCCTCAGTaGCCAGTGACATCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: PTLFLPPGMHHVSHMQRVNKAPQ*PVTSRF
Trigger: AAACCTGGATGTCACTGGCCACTGAGGAGCTTTGTT...GACTCTTTGCATATGACTCACATGATGCATACCTGGTGGGAGGAAAAGAGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp ATACCCATTAGACATATCCAGCTTGAAATTTATACCATTGCACTGCCAAACGGACAGGAGGGCTCTGGGTaGGTCTGTGTTGAAACAGGC +
Preference number: 4 (lower is better)
Translates to: IPIRHIQLEIYTIALPNGQEGSG*VCVETG
Trigger: GCCTGTTTCAACACAGACCCACCCAGAGCCCTCCTG...TCCGTTTGGCAGTGCAATGGTATAAATTTCAAGCTGGATATGTCTAATGGGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp ACAGCCTGCAGCTTTGTTTCATGGTACATCACTGACAATGCATATTATTTCTACCAGGAGGGCTCTGGGTaGGTCTGTGTTGAAACAGGC +
Preference number: 4 (lower is better)
Translates to: TACSFVSWYITDNAYYFYQEGSG*VCVETG
Trigger: GCCTGTTTCAACACAGACCCACCCAGAGCCCTCCTG...GTAGAAATAATATGCATTGTCAGTGATGTACCATGAAACAAAGCTGCAGGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp AATGCAATCCACTGTCACTCTTGCAAATTCTACCTTGGAGGGAAAAACTTAATGCAGGAGGGCTCTGGGTaGGTCTGTGTTGAAACAGGC +
Preference number: 4 (lower is better)
Translates to: NAIHCHSCKFYLGGKNLMQEGSG*VCVETG
Trigger: GCCTGTTTCAACACAGACCCACCCAGAGCCCTCCTG...CATTAAGTTTTTCCCTCCAAGGTAGAATTTGCAAGAGTGACAGTGGATTGCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAAGAGGATCTTACCACGTaGAGCATACTGCAAACTGAC +
Preference number: 4 (lower is better)
Translates to: DGDPANNMESESMFTGTEEDLTT*SILQTD
Trigger: GTCAGTTTGCAGTATGCTCCACGTGGTAAGATCCTC...TTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp ACACGAAGCGGTGCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGACTTCTAAAGCAGCTTaGAGGATCTTACCACGTGGA +
Preference number: 4 (lower is better)
Translates to: TRSGAWQLVVGFPKTGVLTSKAA*RILPRG
Trigger: TCCACGTGGTAAGATCCTCCAAGCTGCTTTAGAAGT...CAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACCGCTTCGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CAAGTTCCAGAGGATTCTGTTTCTTACTCAGACAGAGCCAGTATTGGGAGTTGGCTGGGGCCAAGAGGCTaGGCACATTTACTGTTATTA +
Preference number: 4 (lower is better)
Translates to: QVPEDSVSYSDRASIGSWLGPRG*AHLLLL
Trigger: TAATAACAGTAAATGTGCCCAGCCTCTTGGCCCCAG...CCAACTCCCAATACTGGCTCTGTCTGAGTAAGAAACAGAATCCTCTGGAACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGATGGGACTGTCTCTGGGGCCAAGAGGCTaGGCACATTTACTGTTATTA +
Preference number: 4 (lower is better)
Translates to: AWQLVVGFPKTGVLMGLSLGPRG*AHLLLL
Trigger: TAATAACAGTAAATGTGCCCAGCCTCTTGGCCCCAG...AGACAGTCCCATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GTCACCGAAATGTTCACTTCCTCAAGTTCCAGAGGATTCTGTTTCTTACTCAGAAATACTGTACAGTTCTaGGGCCAAGAGGCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: VTEMFTSSSSRGFCFLLRNTVQF*GQEAGH
Trigger: GTGCCCAGCCTCTTGGCCCCAGAACTGTACAGTATT...TCTGAGTAAGAAACAGAATCCTCTGGAACTTGAGGAAGTGAACATTTCGGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCATGTCAGCTGTCATTCTaGCCTCTCTTGCGGAGTATT +
Preference number: 4 (lower is better)
Translates to: DPANNMESESMFTGTEHPCQLSF*PLLRSI
Trigger: AATACTCCGCAAGAGAGGCCAGAATGACAGCTGACA...TGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCTGTCAGCTGTCATTCTaGCCTCTCTTGCGGAGTATT +
Preference number: 4 (lower is better)
Translates to: VIRPTTWKANLCLQAQNICQLSF*PLLRSI
Trigger: AATACTCCGCAAGAGAGGCCAGAATGACAGCTGACA...GATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GGGCCCACGGCAGATTTTCCAAAAGGTTTAGGTGCATGGATTTACTCAGTATCTTGTCAGCTGTCATTCTaGCCTCTCTTGCGGAGTATT +
Preference number: 4 (lower is better)
Translates to: GPTADFPKGLGAWIYSVSCQLSF*PLLRSI
Trigger: AATACTCCGCAAGAGAGGCCAGAATGACAGCTGACA...AGATACTGAGTAAATCCATGCACCTAAACCTTTTGGAAAATCTGCCGTGGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CCGTCTGCTCTTCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTCCTAATTTTTCCCACTaGGCCAGAGCTACATCTTTA +
Preference number: 4 (lower is better)
Translates to: PSALQMVIRPTTWKANLCPNFSH*ARATSL
Trigger: TAAAGATGTAGCTCTGGCCCAGTGGGAAAAATTAGG...ACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGAAGAGCAGACGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp TGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGTAACCACATTTGTCTaGGCTGCAAAAGACACCACA +
Preference number: 4 (lower is better)
Translates to: WKANLCLQAQNIQVEPHEVTTFV*AAKDTT
Trigger: TGTGGTGTCTTTTGCAGCCCAGACAAATGTGGTTAC...TTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp ACACGAAGCGGTGCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGGTAACCACATTTGTCTaGGCTGCAAAAGACACCACA +
Preference number: 4 (lower is better)
Translates to: TRSGAWQLVVGFPKTGVLVTTFV*AAKDTT
Trigger: TGTGGTGTCTTTTGCAGCCCAGACAAATGTGGTTAC...CAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACCGCTTCGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp ATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGGTGCTTGGCAAAACAGAATGATTCACTaGGTAAGACTAAAGGACTTG +
Preference number: 4 (lower is better)
Translates to: MFTGTEHPGGATRSGAWQNRMIH*VRLKDL
Trigger: CAAGTCCTTTAGTCTTACCCAGTGAATCATTCTGTT...TTGCCAAGCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GGTCCATCTGAAGTTCCCAACTCTTTTCCTCCCACCAGGTATGCATCATGTGAGGGTTGTCCAAAGACATaGAACAGAATGATTCACTGG +
Preference number: 4 (lower is better)
Translates to: GPSEVPNSFPPTRYASCEGCPKT*NRMIHW
Trigger: CCAGTGAATCATTCTGTTCCATGTCTTTGGACAACC...CTCACATGATGCATACCTGGTGGGAGGAAAAGAGTTGGGAACTTCAGATGGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp TTTAAGGGCATTTTTCCCATCGCTGTCCTTCGGCGTGGAAATCTCAGTGGGTACGGTTGTCCAAAGACATaGAACAGAATGATTCACTGG +
Preference number: 4 (lower is better)
Translates to: FKGIFPIAVLRRGNLSGYGCPKT*NRMIHW
Trigger: CCAGTGAATCATTCTGTTCCATGTCTTTGGACAACC...GTACCCACTGAGATTTCCACGCCGAAGGACAGCGATGGGAAAAATGCCCTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp TGGGTACTAGGTCCATCTGAAGTTCCCAACTCTTTTCCTCCCACCAGGTATGCAGGTTGTCCAAAGACATaGAACAGAATGATTCACTGG +
Preference number: 4 (lower is better)
Translates to: WVLGPSEVPNSFPPTRYAGCPKT*NRMIHW
Trigger: CCAGTGAATCATTCTGTTCCATGTCTTTGGACAACC...TGCATACCTGGTGGGAGGAAAAGAGTTGGGAACTTCAGATGGACCTAGTACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp AAGGTTCTTCGCAGAGGCATCACATCGACCCCAATACAGGTCCTTCATACCCTTTTGAAGTTATTTTTCTaGGGCAGTCCAGATGAACCG +
Preference number: 4 (lower is better)
Translates to: KVLRRGITSTPIQVLHTLLKLFF*GSPDEP
Trigger: CGGTTCATCTGGACTGCCCCAGAAAAATAACTTCAA...AAGGGTATGAAGGACCTGTATTGGGGTCGATGTGATGCCTCTGCGAAGAACCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CTCTGGGTAACTCTAGCCTTCCTGATGCGGAAGTCACCGAAATGTTCACTTCCTTTGAAGTTATTTTTCTaGGGCAGTCCAGATGAACCG +
Preference number: 4 (lower is better)
Translates to: LWVTLAFLMRKSPKCSLPLKLFF*GSPDEP
Trigger: CGGTTCATCTGGACTGCCCCAGAAAAATAACTTCAA...AGGAAGTGAACATTTCGGTGACTTCCGCATCAGGAAGGCTAGAGTTACCCAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp TCTAAAGCAGCTTGGAGGATCTTACCACGTGGAGCATACTGCAAACTGACTCCACTTCTGTGCTCAGCTTaGTATGCAGAACAACCTTGT +
Preference number: 4 (lower is better)
Translates to: SKAAWRILPRGAYCKLTPLLCSA*YAEQPC
Trigger: ACAAGGTTGTTCTGCATACCAAGCTGAGCACAGAAG...TGGAGTCAGTTTGCAGTATGCTCCACGTGGTAAGATCCTCCAAGCTGCTTTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp ATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGACTTCTGTGCTCAGCTTaGTATGCAGAACAACCTTGT +
Preference number: 4 (lower is better)
Translates to: MESESMFTGTEHPGGATRLLCSA*YAEQPC
Trigger: ACAAGGTTGTTCTGCATACCAAGCTGAGCACAGAAG...TCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp TATGGAACACAAAAGTCAAACAGATTTCCTCAGCCTCACAAGGTTCCAATTTTCAGGAAACGGTGGTCCTaGGGACTCCTGGACCTTCAG +
Preference number: 4 (lower is better)
Translates to: YGTQKSNRFPQPHKVPIFRKRWS*GLLDLQ
Trigger: CTGAAGGTCCAGGAGTCCCCAGGACCACCGTTTCCT...GAAAATTGGAACCTTGTGAGGCTGAGGAAATCTGTTTGACTTTTGTGTTCCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR CCA 90 bp GTCTTCTGGGACAATCTATCAGAGGCTGATCATTCCAAGGACCTGATTTATCCATCAGGGGAGCTTGTTTaGGATGCAGACTGTCAAGAC +
Preference number: 4 (lower is better)
Translates to: VFWDNLSEADHSKDLIYPSGELV*DADCQD
Trigger: GTCTTGACAGTCTGCATCCCAAACAAGCTCCCCTGA...TGGATAAATCAGGTCCTTGGAATGATCAGCCTCTGATAGATTGTCCCAGAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR TCA 90 bp GATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGCAGGAATCCTCTTCTaGTTAAACTCCGAACAGCAA +
Preference number: 4 (lower is better)
Translates to: DPANNMESESMFTGTEHPAGILF*LNSEQQ
Trigger: TTGCTGTTCGGAGTTTAATCAGAAGAGGATTCCTGC...TGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333681.5
ENST00000398117.1
CDS-3UTR TCA 90 bp TTCTACTGCTTTAGTGAACCTTTTGCATATTTGTTTGGGGCAGGCATGTTGACTTTCGCAGAAGTCCTGTaGTGTTTTCCCCTTCTCGGC +
Preference number: 4 (lower is better)
Translates to: FYCFSEPFAYLFGAGMLTFAEVL*CFPLLG
Trigger: GCCGAGAAGGGGAAAACATCACAGGACTTCTGCGAA...AGTCAACATGCCTGCCCCAAACAAATATGCAAAAGGTTCACTAAAGCAGTAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000333681.5
ENST00000398117.1
CDS-3UTR TCA 90 bp TCCATGACACCTCACTTCAATGCTTCTTTTAGGATTTGTGACCCTCTCCAAAGTTTTGAAACTTCCCAATaGATCAGGAGTCGCGGGGAG +
Preference number: 4 (lower is better)
Translates to: SMTPHFNASFRICDPLQSFETSQ*IRSRGE
Trigger: CTCCCCGCGACTCCTGATTCATTGGGAAGTTTCAAA...ACTTTGGAGAGGGTCACAAATCCTAAAAGAAGCATTGAAGTGAGGTGTCATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333681.5
ENST00000398117.1
CDS-3UTR TCA 90 bp TTTAAGGGCATTTTTCCCATCGCTGTCCTTCGGCGTGGAAATCTCAGTGGGTACATTCGACGTTTTGCCTaGAGACTGTTAATTGTTGTG +
Preference number: 4 (lower is better)
Translates to: FKGIFPIAVLRRGNLSGYIRRFA*RLLIVV
Trigger: CACAACAATTAACAGTCTTCAGGCAAAACGTCGAAT...GTACCCACTGAGATTTCCACGCCGAAGGACAGCGATGGGAAAAATGCCCTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp CGAAGCGGTGCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGATGTTGGCAGTAAATAGCTaGTTCGACGTTTTGCCTGAA +
Preference number: 4 (lower is better)
Translates to: RSGAWQLVVGFPKTGVLMLAVNS*FDVLPE
Trigger: TTCAGGCAAAACGTCGAATCAGCTATTTACTGCCAA...CATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACCGCTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp AAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGGCACAGCATTAAACATTaGACAGAGTACATTCCAAAG +
Preference number: 4 (lower is better)
Translates to: KRIYVYRHRTSRWSHTKRHSIKH*TEYIPK
Trigger: CTTTGGAATGTACTCTGTTCAATGTTTAATGCTGTG...CCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp ACACGAAGCGGTGCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGTGTTGGCGTCTTGTTTaGACTAAATTGAGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: TRSGAWQLVVGFPKTGVLCWRLV*TKLRCF
Trigger: GAAGCACCTCAATTTAGTTCAAACAAGACGCCAACA...CAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACCGCTTCGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp CCAACTCTTTTCCTCCCACCAGGTATGCATCATGTGAGTCATATGCAAAGAGTCCACTTTGAGCCATGCTaGTGTCTCTGGAATCTAAAG +
Preference number: 4 (lower is better)
Translates to: PTLFLPPGMHHVSHMQRVHFEPC*CLWNLK
Trigger: CTTTAGATTCCAGAGACATCAGCATGGCTCAAAGTG...GACTCTTTGCATATGACTCACATGATGCATACCTGGTGGGAGGAAAAGAGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp GGGCCCACGGCAGATTTTCCAAAAGGTTTAGGTGCATGGATTTACTCAGTATCTCAGAATTTTCTTGATTaGGCGAGCCTTTCCATCCTC +
Preference number: 4 (lower is better)
Translates to: GPTADFPKGLGAWIYSVSQNFLD*ASLSIL
Trigger: GAGGATGGAAAGGCTCGCTCAATCAAGAAAATTCTG...AGATACTGAGTAAATCCATGCACCTAAACCTTTTGGAAAATCTGCCGTGGGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp TCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACACAGAATTTTCTTGATTaGGCGAGCCTTTCCATCCTC +
Preference number: 4 (lower is better)
Translates to: SDGDPANNMESESMFTGTQNFLD*ASLSIL
Trigger: GAGGATGGAAAGGCTCGCTCAATCAAGAAAATTCTG...TGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp AAACATGCATGTAATCCTGAATACCATGAATTAAATGCGGAATTGCCCAGGGACCCTGGACCTTCAGCTTaGGAAACACTGAAGGGGTAC +
Preference number: 4 (lower is better)
Translates to: KHACNPEYHELNAELPRDPGPSA*ETLKGY
Trigger: GTACCCCTTCAGTGTTTCTCAAGCTGAAGGTCCAGG...GTCCCTGGGCAATTCCGCATTTAATTCATGGTATTCAGGATTACATGCATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678349.1
CDS-3UTR TCA 90 bp TCTTCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCTGGGATTCATTTGATTaGGGAGGGTCACAAGCTGTA +
Preference number: 4 (lower is better)
Translates to: SSDGDPANNMESESMFTGWDSFD*GGSQAV
Trigger: TACAGCTTGTGACCCTCCTCAATCAAATGAATCCCA...GCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678301.1
CDS-3UTR TCA 90 bp GCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGATGGGACTGTCTAGGCCAAAACATGGATaGACCTTGAAGACATCATGC +
Preference number: 4 (lower is better)
Translates to: AWQLVVGFPKTGVLMGLSRPKHG*TLKTSC
Trigger: GCATGATGTCTTCAAGGTTCATCCATGTTTTGGCCT...AGACAGTCCCATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677227.1
CDS-3UTR GCA 90 bp GGTGCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGATGGGACTGCATTTTCCGAAAAGCTaGTGGATAAATGAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: GAWQLVVGFPKTGVLMGLHFPKS*WINEGR
Trigger: CCTGCCTTCATTTATCCAGCAGCTTTTCGGAAAATG...CAGTCCCATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333681.5
ENST00000398117.1
CDS-3UTR GCA 90 bp ATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGACATTTTCCGAAAAGCTaGTGGATAAATGAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: MESESMFTGTEHPGGATRHFPKS*WINEGR
Trigger: CCTGCCTTCATTTATCCAGCAGCTTTTCGGAAAATG...TCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333681.5
ENST00000398117.1
CDS-3UTR GCA 90 bp CTTCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCATTATTGGATGTGCTTTaGATTCTTGGACGAGGGGGT +
Preference number: 4 (lower is better)
Translates to: LQMVIRPTTWKANLCLQALLDVL*ILGRGG
Trigger: ACCCCCTCGTCCAAGAATGCAAAGCACATCCAATAA...TGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333681.5
ENST00000398117.1
CDS-3UTR GCA 90 bp TTTCCAAAAGGTTTAGGTGCATGGATTTACTCAGTATCTACACTACAGTCTTATGTGAAGGGCGTCAGGTaGAGCTGGCTGGACATCTCG +
Preference number: 4 (lower is better)
Translates to: FPKGLGAWIYSVSTLQSYVKGVR*SWLDIS
Trigger: CGAGATGTCCAGCCAGCTGCACCTGACGCCCTTCAC...ATAAGACTGTAGTGTAGATACTGAGTAAATCCATGCACCTAAACCTTTTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR GCA 90 bp TGGGTACTAGGTCCATCTGAAGTTCCCAACTCTTTTCCTCCCACCAGGTATGCAGCTGATTCGACGTTTTaGCTGAAGACTGTTAATTGT +
Preference number: 4 (lower is better)
Translates to: WVLGPSEVPNSFPPTRYAADSTF*LKTVNC
Trigger: ACAATTAACAGTCTTCAGGCAAAACGTCGAATCAGC...TGCATACCTGGTGGGAGGAAAAGAGTTGGGAACTTCAGATGGACCTAGTACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp GGGTGCGTATCCAAAATATATGAATATACACAATCAGGGCTTAAGGTACTGGATAGCCACACGAAGCGGTaGTTGGCAATTAGTGGTCGG +
Preference number: 4 (lower is better)
Translates to: GCVSKIYEYTQSGLKVLDSHTKR*LAISGR
Trigger: CCGACCACTAATTGCCAAGCACCGCTTCGTGTGGCT...ATCCAGTACCTTAAGCCCTGATTGTGTATATTCATATATTTTGGATACGCACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp TTCTACTGCTTTAGTGAACCTTTTGCATATTTGTTTGGGGCAGGCATGTTGACTGCCACACAGCCAACGTaGCATGTGCTACAGCCAAAA +
Preference number: 4 (lower is better)
Translates to: FYCFSEPFAYLFGAGMLTATQPT*HVLQPK
Trigger: TTTTGGCTGTAGCACATGGCACGTTGGCTGTGTGGC...AGTCAACATGCCTGCCCCAAACAAATATGCAAAAGGTTCACTAAAGCAGTAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp GAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCAAAGAGCAGTTAAGATaGAGATGTGAATCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: ESESMFTGTEHPGGATRSKEQLR*RCESLF
Trigger: GAAGAGGGATTCACATCTGCATCTTAACTGCTCTTT...GCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp GTGAGATGCATATTTCATGATTGTCCAAGGTCATGGTTGTCCAAAGACATGGAACCTGCCAGAGTTTTCTaGCCCTGCCAAATCTTCGGA +
Preference number: 4 (lower is better)
Translates to: VRCIFHDCPRSWLSKDMEPARVF*PCQIFG
Trigger: TCCGAAGATTTGGCAGGGGCAGAAAACTCTGGCAGG...TTCCATGTCTTTGGACAACCATGACCTTGGACAATCATGAAATATGCATCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp TGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAACACATTTGTCTGGGCTaGAAAAGACACCACAGAATA +
Preference number: 4 (lower is better)
Translates to: WKANLCLQAQNIQVEPHEHICLG*KRHHRI
Trigger: TATTCTGTGGTGTCTTTTGCAGCCCAGACAAATGTG...TTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp GTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCGTGCTCAGCTTGGTATaGAGAACAACCTTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: VIRPTTWKANLCLQAQNIVLSLV*RTTLLL
Trigger: CAACAACAAGGTTGTTCTGCATACCAAGCTGAGCAC...GATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp AAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGGTCCAAAAGGTTTAGGTaGATGGATTTACTCAGTATC +
Preference number: 4 (lower is better)
Translates to: KRIYVYRHRTSRWSHTKRSKRFR*MDLLSI
Trigger: GATACTGAGTAAATCCATGCACCTAAACCTTTTGGA...CCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp GTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCATCCACTGTCACTCTTaGAAATTCTACCTTGGAGGG +
Preference number: 4 (lower is better)
Translates to: VIRPTTWKANLCLQAQNIIHCHS*KFYLGG
Trigger: CCCTCCAAGGTAGAATTTGCAAGAGTGACAGTGGAT...GATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp TCTCACAAATGTTCTTCAAAGCCACAGGTATCAATCACTTCAACTAAAGTAAGGCAGCCTCCGTTATCCTaGATCCAGGTGTGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: SHKCSSKPQVSITSTKVRQPPLS*IQVCRC
Trigger: GCACCTGCACACCTGGATCCAGGATAACGGAGGCTG...CCTTACTTTAGTTGAAGTGATTGATACCTGTGGCTTTGAAGAACATTTGTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR CCA 90 bp CTGTCACTCTTGCAAATTCTACCTTGGAGGGAAAAACTTAATGAAATGAGCTATACAGAGGCCGCATGCTaGGGCCGTACAGTTCCACAA +
Preference number: 4 (lower is better)
Translates to: LSLLQILPWREKLNEMSYTEAAC*GRTVPQ
Trigger: TTGTGGAACTGTACGGCCCCAGCATGCGGCCTCTGT...ATAGCTCATTTCATTAAGTTTTTCCCTCCAAGGTAGAATTTGCAAGAGTGACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp TGGGTACTAGGTCCATCTGAAGTTCCCAACTCTTTTCCTCCCACCAGGTATGCAATCCGGCCAACAACATaGAAAGCGAATCTATGTTTA +
Preference number: 4 (lower is better)
Translates to: WVLGPSEVPNSFPPTRYAIRPTT*KANLCL
Trigger: TAAACATAGATTCGCTTTCCATGTTGTTGGCCGGAT...TGCATACCTGGTGGGAGGAAAAGAGTTGGGAACTTCAGATGGACCTAGTACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GTAGCTGAGACTCAGGGCTTATCTCACCTTCTCAGAATGCTTTTGAAGAATCAAGCCAGTATTGGGAGTTaGGGGGTGCGTATCCAAAAT +
Preference number: 4 (lower is better)
Translates to: VAETQGLSHLLRMLLKNQASIGS*GVRIQN
Trigger: ATTTTGGATACGCACCCCCCAACTCCCAATACTGGC...TTGATTCTTCAAAAGCATTCTGAGAAGGTGAGATAAGCCCTGAGTCTCAGCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GGTCCATCTGAAGTTCCCAACTCTTTTCCTCCCACCAGGTATGCATCATGTGAGGAAATGCACATGACTTaGTTGAAACAAAGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: GPSEVPNSFPPTRYASCEEMHMT*LKQSSS
Trigger: TGAGGAGCTTTGTTTCAACCAAGTCATGTGCATTTC...CTCACATGATGCATACCTGGTGGGAGGAAAAGAGTTGGGAACTTCAGATGGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CTGTCACTCTTGCAAATTCTACCTTGGAGGGAAAAACTTAATGAAATGAGCTATCAGGAGGGCTCTGGGTaGGTCTGTGTTGAAACAGGC +
Preference number: 4 (lower is better)
Translates to: LSLLQILPWREKLNEMSYQEGSG*VCVETG
Trigger: GCCTGTTTCAACACAGACCCACCCAGAGCCCTCCTG...ATAGCTCATTTCATTAAGTTTTTCCCTCCAAGGTAGAATTTGCAAGAGTGACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CCCACGGCAGATTTTCCAAAAGGTTTAGGTGCATGGATTTACTCAGTATCTACATTCCTGCTTTCTTGGTaGAGCGTAAGCACCACTGCA +
Preference number: 4 (lower is better)
Translates to: PTADFPKGLGAWIYSVSTFLLSW*SVSTTA
Trigger: TGCAGTGGTGCTTACGCTCCACCAAGAAAGCAGGAA...TGTAGATACTGAGTAAATCCATGCACCTAAACCTTTTGGAAAATCTGCCGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp TTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGGTGCTTGGCAATTAATAGCAGCACAGGATTaGATATTCCATATTCATCAC +
Preference number: 4 (lower is better)
Translates to: FTGTEHPGGATRSGAWQLIAAQD*IFHIHH
Trigger: GTGATGAATATGGAATATCCAATCCTGTGCTGCTAT...TAATTGCCAAGCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp TCGACGTTTTGCCTGAAGACTGTTAATTGTTGTGTGTGTGTGTGTCTGTCTGTGGAGGATCTTACCACGTaGAGCATACTGCAAACTGAC +
Preference number: 4 (lower is better)
Translates to: STFCLKTVNCCVCVCLSVEDLTT*SILQTD
Trigger: GTCAGTTTGCAGTATGCTCCACGTGGTAAGATCCTC...CACAGACAGACACACACACACACAACAATTAACAGTCTTCAGGCAAAACGTCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp AACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACTTCTAAAGCAGCTTaGAGGATCTTACCACGTGGA +
Preference number: 4 (lower is better)
Translates to: NNMESESMFTGTEHPGGATSKAA*RILPRG
Trigger: TCCACGTGGTAAGATCCTCCAAGCTGCTTTAGAAGT...GGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp AGCGGTGCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGATGGGACCTAATTTTTCCCACTaGGCCAGAGCTACATCTTTA +
Preference number: 4 (lower is better)
Translates to: SGAWQLVVGFPKTGVLMGPNFSH*ARATSL
Trigger: TAAAGATGTAGCTCTGGCCCAGTGGGAAAAATTAGG...TCCCATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACCGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GCCACACGAAGCGGTGCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTAAGCTAGACATGTGTTaGGATTGCCCTGATTATTTA +
Preference number: 4 (lower is better)
Translates to: ATRSGAWQLVVGFPKTGVKLDMC*DCPDYL
Trigger: TAAATAATCAGGGCAATCCCAACACATGTCTAGCTT...AACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACCGCTTCGTGTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp TTCCTGATGCGGAAGTCACCGAAATGTTCACTTCCTCAAGTTCCAGAGGATTCTGTAACCACATTTGTCTaGGCTGCAAAAGACACCACA +
Preference number: 4 (lower is better)
Translates to: FLMRKSPKCSLPQVPEDSVTTFV*AAKDTT
Trigger: TGTGGTGTCTTTTGCAGCCCAGACAAATGTGGTTAC...AGAATCCTCTGGAACTTGAGGAAGTGAACATTTCGGTGACTTCCGCATCAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGATGGGACTGTCTCAAACGCTAGATCTTTaGATCTCCACGACTAGCAAG +
Preference number: 4 (lower is better)
Translates to: AWQLVVGFPKTGVLMGLSQTLDL*ISTTSK
Trigger: CTTGCTAGTCGTGGAGATCCAAAGATCTAGCGTTTG...AGACAGTCCCATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678349.1
CDS-3UTR CCA 90 bp AACTCAATCCCTTGCCTGCAAGAGTCCCTTTGTCTTAAAGAAGCTGCAAGGTCATGTCAAGACCCAACCTaGTATCTGGTTCATAAGCAG +
Preference number: 4 (lower is better)
Translates to: NSIPCLQESLCLKEAARSCQDPT*YLVHKQ
Trigger: CTGCTTATGAACCAGATACCAGGTTGGGTCTTGACA...TGACCTTGCAGCTTCTTTAAGACAAAGGGACTCTTGCAGGCAAGGGATTGAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR CCA 90 bp TCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACATGTCAAGACCCAACCTaGTATCTGGTTCATAAGCAG +
Preference number: 4 (lower is better)
Translates to: SDGDPANNMESESMFTGTCQDPT*YLVHKQ
Trigger: CTGCTTATGAACCAGATACCAGGTTGGGTCTTGACA...TGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678349.1
CDS-3UTR CCA 90 bp AATCAAATGTTTTGCTGGATGTGGACTGCCTTGAGAAAGGAAAAACTGCTTGCTTCAGTAGCTCTGGGGTaGGAGCTGAGCTTTAGCATC +
Preference number: 4 (lower is better)
Translates to: NQMFCWMWTALRKEKLLASVALG*ELSFSI
Trigger: GATGCTAAAGCTCAGCTCCCACCCCAGAGCTACTGA...AGCAAGCAGTTTTTCCTTTCTCAAGGCAGTCCACATCCAGCAAAACATTTGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR CCA 90 bp GAAGGGGTACCATTTACCACCACATCCTACTGGATTACAAACGCTAGATCTTTGTGGCTTTCTGTTACCTaGTATGCTGTGTGGCCTGAT +
Preference number: 4 (lower is better)
Translates to: EGVPFTTTSYWITNARSLWLSVT*YAVWPD
Trigger: ATCAGGCCACACAGCATACCAGGTAACAGAAAGCCA...CAAAGATCTAGCGTTTGTAATCCAGTAGGATGTGGTGGTAAATGGTACCCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR CCA 90 bp TTCCTGATGCGGAAGTCACCGAAATGTTCACTTCCTCAAGTTCCAGAGGATTCTATCAAATTACAGTACTaGCGACAAACAGGCACTCCG +
Preference number: 4 (lower is better)
Translates to: FLMRKSPKCSLPQVPEDSIKLQY*RQTGTP
Trigger: CGGAGTGCCTGTTTGTCGCCAGTACTGTAATTTGAT...AGAATCCTCTGGAACTTGAGGAAGTGAACATTTCGGTGACTTCCGCATCAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678134.1
3UTR CAA 72 bp AACAATTCTGTTGACGTGGAAATGCACATGACTTGGTaGAAACAAAGCTCCTCAGTGGCCAGTGACATCCAG +
Preference number: 4 (lower is better)
Translates to: NNSVDVEMHMTW*KQSSSVASDIQ
Trigger: CTGGATGTCACTGGCCACTGAGGAGCTTTGTTTCAACCAAGTCATGTGCATTTCCACGTCAACAGAATTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp CAAGTTCCAGAGGATTCTGTTTCTTACTCAGACAGAGCCAGTATTGGGAGTTGGTTGGCAGTAAATAGCTaGTTCGACGTTTTGCCTGAA +
Preference number: 4 (lower is better)
Translates to: QVPEDSVSYSDRASIGSWLAVNS*FDVLPE
Trigger: TTCAGGCAAAACGTCGAATCAGCTATTTACTGCCAA...CCAACTCCCAATACTGGCTCTGTCTGAGTAAGAAACAGAATCCTCTGGAACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp GTAGCTGAGACTCAGGGCTTATCTCACCTTCTCAGAATGCTTTTGAAGAATCAAAGAAATGCAAGTGAATaGACACCTTCTCCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: VAETQGLSHLLRMLLKNQRNASE*TPSPQP
Trigger: AGGCTGGGGAGAAGGTGTTCATTCACTTGCATTTCT...TTGATTCTTCAAAAGCATTCTGAGAAGGTGAGATAAGCCCTGAGTCTCAGCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp GCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGATGGGACTGTCTCAGGTATGCATCATGTaGGTCATATGCAAAGAGTCT +
Preference number: 4 (lower is better)
Translates to: AWQLVVGFPKTGVLMGLSQVCIM*VICKES
Trigger: AGACTCTTTGCATATGACTCACATGATGCATACCTG...AGACAGTCCCATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp TCCATGACACCTCACTTCAATGCTTCTTTTAGGATTTGTGACCCTCTCCAAAGTTTGACAGTGGAATTCTaGGCTCCATCAGCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: SMTPHFNASFRICDPLQSLTVEF*APSASR
Trigger: TCTGGAAGCTGATGGAGCTCAGAATTCCACTGTCAA...ACTTTGGAGAGGGTCACAAATCCTAAAAGAAGCATTGAAGTGAGGTGTCATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp ACGTTTTGCCTGAAGACTGTTAATTGTTGTGTGTGTGTGTGTCTGTCTGTGTGTTTGACAGTGGAATTCTaGGCTCCATCAGCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: TFCLKTVNCCVCVCLSVCLTVEF*APSASR
Trigger: TCTGGAAGCTGATGGAGCTCAGAATTCCACTGTCAA...ACACACAGACAGACACACACACACACAACAATTAACAGTCTTCAGGCAAAACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp AACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCGGGTCAATTAATCCATaGCACCTCACTTCAATGCTT +
Preference number: 4 (lower is better)
Translates to: NNMESESMFTGTEHPGGAGSINP*HLTSML
Trigger: AAGCATTGAAGTGAGGTGTCATGGATTAATTGACCC...GGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp CAGCCTGCAGCTTTGTTTCATGGTACATCACTGACAATGCATATTATTTCTACTTGGGTGGGTCTGTGTTaGAACAGGCCACGTAAAGCA +
Preference number: 4 (lower is better)
Translates to: QPAALFHGTSLTMHIISTWVGLC*NRPRKA
Trigger: TGCTTTACGTGGCCTGTTTCAACACAGACCCACCCA...AGTAGAAATAATATGCATTGTCAGTGATGTACCATGAAACAAAGCTGCAGGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp CTTCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCATGTTGGCGTCTTGTTTaGACTAAATTGAGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: LQMVIRPTTWKANLCLQACWRLV*TKLRCF
Trigger: GAAGCACCTCAATTTAGTTCAAACAAGACGCCAACA...TGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp TCTAAAGCAGCTTGGAGGATCTTACCACGTGGAGCATACTGCAAACTGACTCCAGAGATGCATATTTCATaGTTGTCCAAGGTCATGGTT +
Preference number: 4 (lower is better)
Translates to: SKAAWRILPRGAYCKLTPEMHIS*LSKVMV
Trigger: AACCATGACCTTGGACAATCATGAAATATGCATCTC...TGGAGTCAGTTTGCAGTATGCTCCACGTGGTAAGATCCTCCAAGCTGCTTTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp ACACGAAGCGGTGCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGGATAGGATGTTTGCTTaGAGTTATTTTTCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: TRSGAWQLVVGFPKTGVLDRMFA*SYFSGA
Trigger: TGCCCCAGAAAAATAACTTCAAGCAAACATCCTATC...CAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACCGCTTCGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp GATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGTCTCAGAATTTTCTTaGTTGAGCGAGCCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: DPANNMESESMFTGTEHPVSEFS*LSEPFH
Trigger: ATGGAAAGGCTCGCTCAATCAAGAAAATTCTGAGAC...TGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp TTCTACTGCTTTAGTGAACCTTTTGCATATTTGTTTGGGGCAGGCATGTTGACTACCCTGGGATTCATTTaGTTGAGGAGGGTCACAAGC +
Preference number: 4 (lower is better)
Translates to: FYCFSEPFAYLFGAGMLTTLGFI*LRRVTS
Trigger: GCTTGTGACCCTCCTCAATCAAATGAATCCCAGGGT...AGTCAACATGCCTGCCCCAAACAAATATGCAAAAGGTTCACTAAAGCAGTAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678301.1
CDS-3UTR GCA 90 bp GGGCCCACGGCAGATTTTCCAAAAGGTTTAGGTGCATGGATTTACTCAGTATCTCGATTCCCAGACTTCTaGTTCACAGAAATGTCAATC +
Preference number: 4 (lower is better)
Translates to: GPTADFPKGLGAWIYSVSRFPDF*FTEMSI
Trigger: GATTGACATTTCTGTGAAGCAGAAGTCTGGGAATCG...AGATACTGAGTAAATCCATGCACCTAAACCTTTTGGAAAATCTGCCGTGGGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333681.5
ENST00000398117.1
CDS-3UTR GCA 90 bp ATGCATATTATTTCTACTGCTTTAGTGAACCTTTTGCATATTTGTTTGGGGCAGCAAACAGAGGCCGCATaGTGGGGCCGTACAGTTCCA +
Preference number: 4 (lower is better)
Translates to: MHIISTALVNLLHICLGQQTEAA*WGRTVP
Trigger: TGGAACTGTACGGCCCCAGCATGCGGCCTCTGTTTG...CTGCCCCAAACAAATATGCAAAAGGTTCACTAAAGCAGTAGAAATAATATGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp ATGCATATTATTTCTACTGCTTTAGTGAACCTTTTGCATATTTGTTTGGGGCAGCTTGCGGAGTATTTGTaGAGCGAGGGACTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: MHIISTALVNLLHICLGQLAEYL*SEGLGG
Trigger: CCCTCCCAGTCCCTCGCTGCACAAATACTCCGCAAG...CTGCCCCAAACAAATATGCAAAAGGTTCACTAAAGCAGTAGAAATAATATGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp ACAGCCTGCAGCTTTGTTTCATGGTACATCACTGACAATGCATATTATTTCTACCCTGCCAGAGTTTTCTaGCCCTGCCAAATCTTCGGA +
Preference number: 4 (lower is better)
Translates to: TACSFVSWYITDNAYYFYPARVF*PCQIFG
Trigger: TCCGAAGATTTGGCAGGGGCAGAAAACTCTGGCAGG...GTAGAAATAATATGCATTGTCAGTGATGTACCATGAAACAAAGCTGCAGGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp ATGGAACAGAATGATTCACTGGGTAAGACTAAAGGACTTGTATTATCACTCTCCCCTGCCAGAGTTTTCTaGCCCTGCCAAATCTTCGGA +
Preference number: 4 (lower is better)
Translates to: MEQNDSLGKTKGLVLSLSPARVF*PCQIFG
Trigger: TCCGAAGATTTGGCAGGGGCAGAAAACTCTGGCAGG...GGAGAGTGATAATACAAGTCCTTTAGTCTTACCCAGTGAATCATTCTGTTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp AACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCCACATTTGTCTGGGCTaGAAAAGACACCACAGAATA +
Preference number: 4 (lower is better)
Translates to: NNMESESMFTGTEHPGGAHICLG*KRHHRI
Trigger: TATTCTGTGGTGTCTTTTGCAGCCCAGACAAATGTG...GGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp AGCTTGGAGGATCTTACCACGTGGAGCATACTGCAAACTGACTCCATTAAAATGGTGCTCAGCTTGGTATaGAGAACAACCTTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: SLEDLTTWSILQTDSIKMVLSLV*RTTLLL
Trigger: CAACAACAAGGTTGTTCTGCATACCAAGCTGAGCAC...CATTTTAATGGAGTCAGTTTGCAGTATGCTCCACGTGGTAAGATCCTCCAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp GATTTAAGGGCATTTTTCCCATCGCTGTCCTTCGGCGTGGAAATCTCAGTGGGTTCCAAAAGGTTTAGGTaGATGGATTTACTCAGTATC +
Preference number: 4 (lower is better)
Translates to: DLRAFFPSLSFGVEISVGSKRFR*MDLLSI
Trigger: GATACTGAGTAAATCCATGCACCTAAACCTTTTGGA...ACCCACTGAGATTTCCACGCCGAAGGACAGCGATGGGAAAAATGCCCTTAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp GGGCCCACGGCAGATTTTCCAAAAGGTTTAGGTGCATGGATTTACTCAGTATCTCTTCCCCAAAAGAAATaGAATCCACTGTCACTCTTG +
Preference number: 4 (lower is better)
Translates to: GPTADFPKGLGAWIYSVSLPQKK*NPLSLL
Trigger: CAAGAGTGACAGTGGATTGCATTTCTTTTGGGGAAG...AGATACTGAGTAAATCCATGCACCTAAACCTTTTGGAAAATCTGCCGTGGGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp TATGGAACACAAAAGTCAAACAGATTTCCTCAGCCTCACAAGGTTCCAATTTTCACTCACATCACCAAGTaGACCTACCCAGCCTCCGTT +
Preference number: 4 (lower is better)
Translates to: YGTQKSNRFPQPHKVPIFTHITK*TYPASV
Trigger: AACGGAGGCTGGGTAGGTGCACTTGGTGATGTGAGT...GAAAATTGGAACCTTGTGAGGCTGAGGAAATCTGTTTGACTTTTGTGTTCCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR GCA 90 bp CACAATGCCTTATTCAGACCTAGGAATAAATCCACACTCCACTCTACAGCCAATCTGCCTCTCTCTGGATaGCACACAATGCCTTATTCA +
Preference number: 4 (lower is better)
Translates to: HNALFRPRNKSTLHSTANLPLSG*HTMPYS
Trigger: TGAATAAGGCATTGTGTGGCATCCAGAGAGAGGCAG...ATTGGCTGTAGAGTGGAGTGTGGATTTATTCCTAGGTCTGAATAAGGCATTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR GCA 90 bp AACTCAATCCCTTGCCTGCAAGAGTCCCTTTGTCTTAAAGAAGCTGCAAGGTCAGTTGATCTACCTGCTTaGTATCTCTCCTTCATCCAA +
Preference number: 4 (lower is better)
Translates to: NSIPCLQESLCLKEAARSVDLPA*YLSFIQ
Trigger: TTGGATGAAGGAGAGATAGCAAGCAGGTAGATCAAC...TGACCTTGCAGCTTCTTTAAGACAAAGGGACTCTTGCAGGCAAGGGATTGAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR GCA 90 bp GTCTTCTGGGACAATCTATCAGAGGCTGATCATTCCAAGGACCTGATTTATCCACAAAACTCAATCCCTTaGCTGCAAGAGTCCCTTTGT +
Preference number: 4 (lower is better)
Translates to: VFWDNLSEADHSKDLIYPQNSIP*LQESLC
Trigger: ACAAAGGGACTCTTGCAGGCAAGGGATTGAGTTTTG...TGGATAAATCAGGTCCTTGGAATGATCAGCCTCTGATAGATTGTCCCAGAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR CCA 90 bp AGCTTGGAGGATCTTACCACGTGGAGCATACTGCAAACTGACTCCATTAAAATGTTTCCGAAAAGCTGCTaGATAAATGAAGGCAGGACG +
Preference number: 4 (lower is better)
Translates to: SLEDLTTWSILQTDSIKMFPKSC*INEGRT
Trigger: CGTCCTGCCTTCATTTATCCAGCAGCTTTTCGGAAA...CATTTTAATGGAGTCAGTTTGCAGTATGCTCCACGTGGTAAGATCCTCCAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333681.5
ENST00000398117.1
CDS-3UTR CCA 90 bp GTAGCTGAGACTCAGGGCTTATCTCACCTTCTCAGAATGCTTTTGAAGAATCAAACACGAAGCGGTGCTTaGCAATTAGTGGTCGGATTT +
Preference number: 4 (lower is better)
Translates to: VAETQGLSHLLRMLLKNQTRSGA*QLVVGF
Trigger: AAATCCGACCACTAATTGCCAAGCACCGCTTCGTGT...TTGATTCTTCAAAAGCATTCTGAGAAGGTGAGATAAGCCCTGAGTCTCAGCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GGTGCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGATGGGACTGATCCGGCCAACAACATaGAAAGCGAATCTATGTTTA +
Preference number: 4 (lower is better)
Translates to: GAWQLVVGFPKTGVLMGLIRPTT*KANLCL
Trigger: TAAACATAGATTCGCTTTCCATGTTGTTGGCCGGAT...CAGTCCCATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GTCTGGCTTCATACCACAGGTTTCCTGCTTTCTTGGTGGAGCGTAAGCACCACTCAGGGCTTAAGGTACTaGATGATATTGTATAAATTG +
Preference number: 4 (lower is better)
Translates to: VWLHTTGFLLSWWSVSTTQGLRY*MILYKL
Trigger: CAATTTATACAATATCATCCAGTACCTTAAGCCCTG...AGTGGTGCTTACGCTCCACCAAGAAAGCAGGAAACCTGTGGTATGAAGCCAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GCCACACGAAGCGGTGCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTCAGGGCTTAAGGTACTaGATGATATTGTATAAATTG +
Preference number: 4 (lower is better)
Translates to: ATRSGAWQLVVGFPKTGVQGLRY*MILYKL
Trigger: CAATTTATACAATATCATCCAGTACCTTAAGCCCTG...AACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACCGCTTCGTGTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp AATGATTTTGGCAGGATAGCAGCACAGGATTGGATATTCCATATTCATCACTTTGTGCTACAGCCAAAATaGGCCGTGGCCATTGCCTCT +
Preference number: 4 (lower is better)
Translates to: NDFGRIAAQDWIFHIHHFVLQPK*AVAIAS
Trigger: AGAGGCAATGGCCACGGCCCATTTTGGCTGTAGCAC...AAAGTGATGAATATGGAATATCCAATCCTGTGCTGCTATCCTGCCAAAATCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACGAAATGCACATGACTTaGTTGAAACAAAGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: QHGKRIYVYRHRTSRWSHEMHMT*LKQSSS
Trigger: TGAGGAGCTTTGTTTCAACCAAGTCATGTGCATTTC...GTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp AGATGCATATTTCATGATTGTCCAAGGTCATGGTTGTCCAAAGACATGGAACAGTTCCTGCTTTCTTGGTaGAGCGTAAGCACCACTGCA +
Preference number: 4 (lower is better)
Translates to: RCIFHDCPRSWLSKDMEQFLLSW*SVSTTA
Trigger: TGCAGTGGTGCTTACGCTCCACCAAGAAAGCAGGAA...CTGTTCCATGTCTTTGGACAACCATGACCTTGGACAATCATGAAATATGCATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp ATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACCCTAATTTTTCCCACTaGGCCAGAGCTACATCTTTA +
Preference number: 4 (lower is better)
Translates to: MVIRPTTWKANLCLQAQNPNFSH*ARATSL
Trigger: TAAAGATGTAGCTCTGGCCCAGTGGGAAAAATTAGG...GTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GGTCCATCTGAAGTTCCCAACTCTTTTCCTCCCACCAGGTATGCATCATGTGAGAAGCTAGACATGTGTTaGGATTGCCCTGATTATTTA +
Preference number: 4 (lower is better)
Translates to: GPSEVPNSFPPTRYASCEKLDMC*DCPDYL
Trigger: TAAATAATCAGGGCAATCCCAACACATGTCTAGCTT...CTCACATGATGCATACCTGGTGGGAGGAAAAGAGTTGGGAACTTCAGATGGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp AAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGGCTAATTTCCTTAGAATaGCTTGTATTTCGAGCCTTT +
Preference number: 4 (lower is better)
Translates to: KRIYVYRHRTSRWSHTKRLISLE*LVFRAF
Trigger: AAAGGCTCGAAATACAAGCCATTCTAAGGAAATTAG...CCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCAACAGAATGATTCACTaGGTAAGACTAAAGGACTTG +
Preference number: 4 (lower is better)
Translates to: ESESMFTGTEHPGGATRSNRMIH*VRLKDL
Trigger: CAAGTCCTTTAGTCTTACCCAGTGAATCATTCTGTT...GCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp TCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAGGTTGTCCAAAGACATaGAACAGAATGATTCACTGG +
Preference number: 4 (lower is better)
Translates to: SDGDPANNMESESMFTGTGCPKT*NRMIHW
Trigger: CCAGTGAATCATTCTGTTCCATGTCTTTGGACAACC...TGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp TTGCCCAGGGACGAGGAAACCTTCAAGAAACAAGGTCAAAGGGACAACAGATATTTGAAGTTATTTTTCTaGGGCAGTCCAGATGAACCG +
Preference number: 4 (lower is better)
Translates to: LPRDEETFKKQGQRDNRYLKLFF*GSPDEP
Trigger: CGGTTCATCTGGACTGCCCCAGAAAAATAACTTCAA...ATATCTGTTGTCCCTTTGACCTTGTTTCTTGAAGGTTTCCTCGTCCCTGGGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GCCACACGAAGCGGTGCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTAAAGGTTTAGGTGCATaGATTTACTCAGTATCTACA +
Preference number: 4 (lower is better)
Translates to: ATRSGAWQLVVGFPKTGVKGLGA*IYSVST
Trigger: TGTAGATACTGAGTAAATCCATGCACCTAAACCTTT...AACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACCGCTTCGTGTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CTTCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCAACCACCACATCCTACTaGATTACAAACGCTAGATCT +
Preference number: 4 (lower is better)
Translates to: LQMVIRPTTWKANLCLQATTTSY*ITNARS
Trigger: AGATCTAGCGTTTGTAATCCAGTAGGATGTGGTGGT...TGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678349.1
CDS-3UTR CCA 90 bp AAACAGCCTGCAGCTTTGTTTCATGGTACATCACTGACAATGCATATTATTTCTTCCACAAAGGCATCCTaGCCTGGAACCCTGGGATTC +
Preference number: 4 (lower is better)
Translates to: KQPAALFHGTSLTMHIISSTKAS*PGTLGF
Trigger: GAATCCCAGGGTTCCAGGCCAGGATGCCTTTGTGGA...AGAAATAATATGCATTGTCAGTGATGTACCATGAAACAAAGCTGCAGGCTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678301.1
CDS-3UTR CCA 90 bp TCTTCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACACAGGCCAAAACATaGATGAACCTTGAAGACATC +
Preference number: 4 (lower is better)
Translates to: SSDGDPANNMESESMFTGTQAKT*MNLEDI
Trigger: GATGTCTTCAAGGTTCATCCATGTTTTGGCCTGTGT...GCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677227.1
3UTR CAA 72 bp TACCCATTAGACATATCCAGCTTGAAATTTATACCATaGCACTGCCAAACGGAGCTGCACTTTGAGCCATGC +
Preference number: 4 (lower is better)
Translates to: YPLDISSLKFIP*HCQTELHFEPC
Trigger: GCATGGCTCAAAGTGCAGCTCCGTTTGGCAGTGCAATGGTATAAATTTCAAGCTGGATATGTCTAATGGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp CTGTCACTCTTGCAAATTCTACCTTGGAGGGAAAAACTTAATGAAATGAGCTATTTCGCAGAAGTCCTGTaGTGTTTTCCCCTTCTCGGC +
Preference number: 4 (lower is better)
Translates to: LSLLQILPWREKLNEMSYFAEVL*CFPLLG
Trigger: GCCGAGAAGGGGAAAACATCACAGGACTTCTGCGAA...ATAGCTCATTTCATTAAGTTTTTCCCTCCAAGGTAGAATTTGCAAGAGTGACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333681.5
ENST00000398117.1
CDS-3UTR TCA 90 bp ATGCATATTATTTCTACTGCTTTAGTGAACCTTTTGCATATTTGTTTGGGGCAGCGCTCTCCACACACATaGCCCCACCGAACTCAAAGA +
Preference number: 4 (lower is better)
Translates to: MHIISTALVNLLHICLGQRSPHT*PHRTQR
Trigger: TCTTTGAGTTCGGTGGGGTCATGTGTGTGGAGAGCG...CTGCCCCAAACAAATATGCAAAAGGTTCACTAAAGCAGTAGAAATAATATGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR TCA 90 bp GCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGATGGGACTGTCTATTCGACGTTTTGCCTaGAGACTGTTAATTGTTGTG +
Preference number: 4 (lower is better)
Translates to: AWQLVVGFPKTGVLMGLSIRRFA*RLLIVV
Trigger: CACAACAATTAACAGTCTTCAGGCAAAACGTCGAAT...AGACAGTCCCATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp AGATGCATATTTCATGATTGTCCAAGGTCATGGTTGTCCAAAGACATGGAACAGAGAAATGCAAGTGAATaGACACCTTCTCCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: RCIFHDCPRSWLSKDMEQRNASE*TPSPQP
Trigger: AGGCTGGGGAGAAGGTGTTCATTCACTTGCATTTCT...CTGTTCCATGTCTTTGGACAACCATGACCTTGGACAATCATGAAATATGCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp ATAGCTGATTCGACGTTTTGCCTGAAGACTGTTAATTGTTGTGTGTGTGTGTGTAGAAATGCAAGTGAATaGACACCTTCTCCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: IADSTFCLKTVNCCVCVCRNASE*TPSPQP
Trigger: AGGCTGGGGAGAAGGTGTTCATTCACTTGCATTTCT...ACACACACACACACAACAATTAACAGTCTTCAGGCAAAACGTCGAATCAGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp GTGAGATGCATATTTCATGATTGTCCAAGGTCATGGTTGTCCAAAGACATGGAAGGTACTAGGTCCATCTaGAGTTCCCAACTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: VRCIFHDCPRSWLSKDMEGTRSI*SSQLFS
Trigger: GGAAAAGAGTTGGGAACTTCAGATGGACCTAGTACC...TTCCATGTCTTTGGACAACCATGACCTTGGACAATCATGAAATATGCATCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp TTTTTAGAGCCCTTGTCCCCAATTTGGAAAGTGCATATACTCTATTTAACTCTGTGGGTGGGTCTGTGTTaGAACAGGCCACGTAAAGCA +
Preference number: 4 (lower is better)
Translates to: FLEPLSPIWKVHILYLTLWVGLC*NRPRKA
Trigger: TGCTTTACGTGGCCTGTTTCAACACAGACCCACCCA...CAGAGTTAAATAGAGTATATGCACTTTCCAAATTGGGGACAAGGGCTCTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp AGCTTGGAGGATCTTACCACGTGGAGCATACTGCAAACTGACTCCATTAAAATGCTGACTCCATTAAAATaGTTTTGGCAGGATAGCAGC +
Preference number: 4 (lower is better)
Translates to: SLEDLTTWSILQTDSIKMLTPLK*FWQDSS
Trigger: GCTGCTATCCTGCCAAAATCATTTTAATGGAGTCAG...CATTTTAATGGAGTCAGTTTGCAGTATGCTCCACGTGGTAAGATCCTCCAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp CAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACTCTGTGAATCCCGTTTaGACAACAACAAAAGACAAA +
Preference number: 4 (lower is better)
Translates to: QHGKRIYVYRHRTSRWSHSVNPV*TTTKDK
Trigger: TTTGTCTTTTGTTGTTGTTCAAACGGGATTCACAGA...GTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp GGTGCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGATGGGACTGGTTAAGATGCAGATGTaGATCCCTCTTCAATACAAA +
Preference number: 4 (lower is better)
Translates to: GAWQLVVGFPKTGVLMGLVKMQM*IPLQYK
Trigger: TTTGTATTGAAGAGGGATTCACATCTGCATCTTAAC...CAGTCCCATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp TCGACGTTTTGCCTGAAGACTGTTAATTGTTGTGTGTGTGTGTGTCTGTCTGTGTGTTGGCGTCTTGTTTaGACTAAATTGAGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: STFCLKTVNCCVCVCLSVCWRLV*TKLRCF
Trigger: GAAGCACCTCAATTTAGTTCAAACAAGACGCCAACA...CACAGACAGACACACACACACACAACAATTAACAGTCTTCAGGCAAAACGTCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp ATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACGATAGGATGTTTGCTTaGAGTTATTTTTCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: MVIRPTTWKANLCLQAQNDRMFA*SYFSGA
Trigger: TGCCCCAGAAAAATAACTTCAAGCAAACATCCTATC...GTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp GTTATGGAACACAAAAGTCAAACAGATTTCCTCAGCCTCACAAGGTTCCAATTTGGGAAGCAACAACTCTaGTTTTATTTCGCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: VMEHKSQTDFLSLTRFQFGKQQL*FYFAGS
Trigger: GGAGCCGGCGAAATAAAATCAGAGTTGTTGCTTCCC...AAATTGGAACCTTGTGAGGCTGAGGAAATCTGTTTGACTTTTGTGTTCCATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR TCA 90 bp AATCAAATGTTTTGCTGGATGTGGACTGCCTTGAGAAAGGAAAAACTGCTTGCTCAGCTTGAGAAACACTaGAGGGGTACCATTTACCAC +
Preference number: 4 (lower is better)
Translates to: NQMFCWMWTALRKEKLLAQLEKH*RGTIYH
Trigger: GTGGTAAATGGTACCCCTTCAGTGTTTCTCAAGCTG...AGCAAGCAGTTTTTCCTTTCTCAAGGCAGTCCACATCCAGCAAAACATTTGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR TCA 90 bp AATCAAATGTTTTGCTGGATGTGGACTGCCTTGAGAAAGGAAAAACTGCTTGCTACAAACCACATATTCTaGCTCAGTAGCTCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: NQMFCWMWTALRKEKLLATNHIF*LSSSGV
Trigger: CACCCCAGAGCTACTGAGTCAGAATATGTGGTTTGT...AGCAAGCAGTTTTTCCTTTCTCAAGGCAGTCCACATCCAGCAAAACATTTGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR GCA 90 bp CTGATGCGGAAGTCACCGAAATGTTCACTTCCTCAAGTTCCAGAGGATTCTGTTGCTGATTCGACGTTTTaGCTGAAGACTGTTAATTGT +
Preference number: 4 (lower is better)
Translates to: LMRKSPKCSLPQVPEDSVADSTF*LKTVNC
Trigger: ACAATTAACAGTCTTCAGGCAAAACGTCGAATCAGC...AACAGAATCCTCTGGAACTTGAGGAAGTGAACATTTCGGTGACTTCCGCATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp GCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGATGGGACTGTCTGCTGATTCGACGTTTTaGCTGAAGACTGTTAATTGT +
Preference number: 4 (lower is better)
Translates to: AWQLVVGFPKTGVLMGLSADSTF*LKTVNC
Trigger: ACAATTAACAGTCTTCAGGCAAAACGTCGAATCAGC...AGACAGTCCCATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp GTTTCTCATTTGTCACACAAGGTTCTTCGCAGAGGCATCACATCGACCCCAATAGCTGATTCGACGTTTTaGCTGAAGACTGTTAATTGT +
Preference number: 4 (lower is better)
Translates to: VSHLSHKVLRRGITSTPIADSTF*LKTVNC
Trigger: ACAATTAACAGTCTTCAGGCAAAACGTCGAATCAGC...TATTGGGGTCGATGTGATGCCTCTGCGAAGAACCTTGTGTGACAAATGAGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp GCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGATGGGACTGTCTTAAATCTTTTTCCATCCGTCTaGTCTTCAGATGGTGATCCG +
Preference number: 4 (lower is better)
Translates to: AISGRISKDRSFDGTVLNLFPSV*SSDGDP
Trigger: CGGATCACCATCTGAAGAGCAGACGGATGGAAAAAG...ATTTAAGACAGTCCCATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp CTTAAACAGCCTGCAGCTTTGTTTCATGGTACATCACTGACAATGCATATTATTGCCACACAGCCAACGTaGCATGTGCTACAGCCAAAA +
Preference number: 4 (lower is better)
Translates to: LKQPAALFHGTSLTMHIIATQPT*HVLQPK
Trigger: TTTTGGCTGTAGCACATGGCACGTTGGCTGTGTGGC...AATAATATGCATTGTCAGTGATGTACCATGAAACAAAGCTGCAGGCTGTTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp AGCGGTGCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGATGGGAGAAAACGATCACCTTTaGTCACAAATAGTGTATAGG +
Preference number: 4 (lower is better)
Translates to: SGAWQLVVGFPKTGVLMGENDHL*SQIVYR
Trigger: CCTATACACTATTTGTGAGCAAAGGTGATCGTTTTC...TCCCATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACCGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp CCCAGGGACGAGGAAACCTTCAAGAAACAAGGTCAAAGGGACAACAGATATAACAAAGAGCAGTTAAGATaGAGATGTGAATCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: PRDEETFKKQGQRDNRYNKEQLR*RCESLF
Trigger: GAAGAGGGATTCACATCTGCATCTTAACTGCTCTTT...GTTATATCTGTTGTCCCTTTGACCTTGTTTCTTGAAGGTTTCCTCGTCCCTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp CATCCGTCTGCTCTTCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTAGACATGTGTTGGGATTaGCCTGATTATTTACATTTA +
Preference number: 4 (lower is better)
Translates to: HPSALQMVIRPTTWKANLDMCWD*PDYLHL
Trigger: TAAATGTAAATAATCAGGGCAATCCCAACACATGTC...TAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGAAGAGCAGACGGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp GAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGACATGTGTTGGGATTaGCCTGATTATTTACATTTA +
Preference number: 4 (lower is better)
Translates to: ESESMFTGTEHPGGATRSDMCWD*PDYLHL
Trigger: TAAATGTAAATAATCAGGGCAATCCCAACACATGTC...GCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp ATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGATCTAAAAACAGCCACTaGCTTAAAAGTACAGTTGGA +
Preference number: 4 (lower is better)
Translates to: MESESMFTGTEHPGGATRSKNSH*LKSTVG
Trigger: TCCAACTGTACTTTTAAGGCAGTGGCTGTTTTTAGA...TCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp GGTGCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGATGGGACTGTCTAAAAACAGCCACTaGCTTAAAAGTACAGTTGGA +
Preference number: 4 (lower is better)
Translates to: GAWQLVVGFPKTGVLMGLSKNSH*LKSTVG
Trigger: TCCAACTGTACTTTTAAGGCAGTGGCTGTTTTTAGA...CAGTCCCATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp CCTCCCACCAGGTATGCATCATGTGAGTCATATGCAAAGAGTCTCTTCTTCAGGTCTAAAAACAGCCACTaGCTTAAAAGTACAGTTGGA +
Preference number: 4 (lower is better)
Translates to: PPTRYASCESYAKSLFFRSKNSH*LKSTVG
Trigger: TCCAACTGTACTTTTAAGGCAGTGGCTGTTTTTAGA...CCTGAAGAAGAGACTCTTTGCATATGACTCACATGATGCATACCTGGTGGGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp ACACGAAGCGGTGCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGTTGCATCCAGTGAGATaGATATTTCATGATTGTCCA +
Preference number: 4 (lower is better)
Translates to: TRSGAWQLVVGFPKTGVLLHPVR*IFHDCP
Trigger: TGGACAATCATGAAATATGCATCTCACTGGATGCAA...CAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACCGCTTCGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp TCCATGACACCTCACTTCAATGCTTCTTTTAGGATTTGTGACCCTCTCCAAAGTTGTTCCCATCTTCTGTaGTCAGCTTGGTATGCAGAA +
Preference number: 4 (lower is better)
Translates to: SMTPHFNASFRICDPLQSCSHLL*SAWYAE
Trigger: TTCTGCATACCAAGCTGAGCACAGAAGATGGGAACA...ACTTTGGAGAGGGTCACAAATCCTAAAAGAAGCATTGAAGTGAGGTGTCATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp CAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACTCCAAAAGGTTTAGGTaGATGGATTTACTCAGTATC +
Preference number: 4 (lower is better)
Translates to: QHGKRIYVYRHRTSRWSHSKRFR*MDLLSI
Trigger: GATACTGAGTAAATCCATGCACCTAAACCTTTTGGA...GTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp TTCATTGTTACTTCTAAAGCAGCTTGGAGGATCTTACCACGTGGAGCATACTGCCTTCCCCAAAAGAAATaGAATCCACTGTCACTCTTG +
Preference number: 4 (lower is better)
Translates to: FIVTSKAAWRILPRGAYCLPQKK*NPLSLL
Trigger: CAAGAGTGACAGTGGATTGCATTTCTTTTGGGGAAG...GCAGTATGCTCCACGTGGTAAGATCCTCCAAGCTGCTTTAGAAGTAACAATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp CACAATGCCTTATTCAGACCTAGGAATAAATCCACACTCCACTCTACAGCCAATACTCAATCCCTTGCCTaGAAGAGTCCCTTTGTCTTA +
Preference number: 4 (lower is better)
Translates to: HNALFRPRNKSTLHSTANTQSLA*KSPFVL
Trigger: TAAGACAAAGGGACTCTTGCAGGCAAGGGATTGAGT...ATTGGCTGTAGAGTGGAGTGTGGATTTATTCCTAGGTCTGAATAAGGCATTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR GCA 90 bp GGAACATGGCACACACTGGAGATTCCAGTCCAAGGACTTTGGAATGTCAACTTAGTTAATCAAATGTTTTaGTGGATGTGGACTGCCTTG +
Preference number: 4 (lower is better)
Translates to: GTWHTLEIPVQGLWNVNLVNQMF*WMWTAL
Trigger: CAAGGCAGTCCACATCCAGCAAAACATTTGATTAAC...TAAGTTGACATTCCAAAGTCCTTGGACTGGAATCTCCAGTGTGTGCCATGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR CCA 90 bp ATAGCTGATTCGACGTTTTGCCTGAAGACTGTTAATTGTTGTGTGTGTGTGTGTACACGAAGCGGTGCTTaGCAATTAGTGGTCGGATTT +
Preference number: 4 (lower is better)
Translates to: IADSTFCLKTVNCCVCVCTRSGA*QLVVGF
Trigger: AAATCCGACCACTAATTGCCAAGCACCGCTTCGTGT...ACACACACACACACAACAATTAACAGTCTTCAGGCAAAACGTCGAATCAGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CTTCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCAGAAATGCACATGACTTaGTTGAAACAAAGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: LQMVIRPTTWKANLCLQAEMHMT*LKQSSS
Trigger: TGAGGAGCTTTGTTTCAACCAAGTCATGTGCATTTC...TGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp TCTAAAGCAGCTTGGAGGATCTTACCACGTGGAGCATACTGCAAACTGACTCCAATAGCAGCACAGGATTaGATATTCCATATTCATCAC +
Preference number: 4 (lower is better)
Translates to: SKAAWRILPRGAYCKLTPIAAQD*IFHIHH
Trigger: GTGATGAATATGGAATATCCAATCCTGTGCTGCTAT...TGGAGTCAGTTTGCAGTATGCTCCACGTGGTAAGATCCTCCAAGCTGCTTTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GTCACCGAAATGTTCACTTCCTCAAGTTCCAGAGGATTCTGTTTCTTACTCAGAACTTCTAAAGCAGCTTaGAGGATCTTACCACGTGGA +
Preference number: 4 (lower is better)
Translates to: VTEMFTSSSSRGFCFLLRTSKAA*RILPRG
Trigger: TCCACGTGGTAAGATCCTCCAAGCTGCTTTAGAAGT...TCTGAGTAAGAAACAGAATCCTCTGGAACTTGAGGAAGTGAACATTTCGGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp TCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGAAGCTAGACATGTGTTaGGATTGCCCTGATTATTTA +
Preference number: 4 (lower is better)
Translates to: SGQQHGKRIYVYRHRTSRKLDMC*DCPDYL
Trigger: TAAATAATCAGGGCAATCCCAACACATGTCTAGCTT...CCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp TGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAAACAGAATGATTCACTaGGTAAGACTAAAGGACTTG +
Preference number: 4 (lower is better)
Translates to: WKANLCLQAQNIQVEPHENRMIH*VRLKDL
Trigger: CAAGTCCTTTAGTCTTACCCAGTGAATCATTCTGTT...TTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp TTTAAGGGCATTTTTCCCATCGCTGTCCTTCGGCGTGGAAATCTCAGTGGGTACAAAGGTTTAGGTGCATaGATTTACTCAGTATCTACA +
Preference number: 4 (lower is better)
Translates to: FKGIFPIAVLRRGNLSGYKGLGA*IYSVST
Trigger: TGTAGATACTGAGTAAATCCATGCACCTAAACCTTT...GTACCCACTGAGATTTCCACGCCGAAGGACAGCGATGGGAAAAATGCCCTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GAAGGGGTACCATTTACCACCACATCCTACTGGATTACAAACGCTAGATCTTTGTTAAAGACTTTTAGATaGCAGGCGTTATCGGTCAGG +
Preference number: 4 (lower is better)
Translates to: EGVPFTTTSYWITNARSLLKTFR*QALSVR
Trigger: CCTGACCGATAACGCCTGCCATCTAAAAGTCTTTAA...CAAAGATCTAGCGTTTGTAATCCAGTAGGATGTGGTGGTAAATGGTACCCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589955.2
ENST00000678349.1
CDS-3UTR CCA 90 bp GAAGGGGTACCATTTACCACCACATCCTACTGGATTACAAACGCTAGATCTTTGCCAGTCCAAGGACTTTaGAATGTCAACTTAGCTCTT +
Preference number: 4 (lower is better)
Translates to: EGVPFTTTSYWITNARSLPVQGL*NVNLAL
Trigger: AAGAGCTAAGTTGACATTCCAAAGTCCTTGGACTGG...CAAAGATCTAGCGTTTGTAATCCAGTAGGATGTGGTGGTAAATGGTACCCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR CCA 90 bp TATGGAACACAAAAGTCAAACAGATTTCCTCAGCCTCACAAGGTTCCAATTTTCGAACTCTACCGGGTGTaGAGAAGTTCCTGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: YGTQKSNRFPQPHKVPIFELYRV*RSSCLP
Trigger: AGGAAGACAGGAACTTCTCCACACCCGGTAGAGTTC...GAAAATTGGAACCTTGTGAGGCTGAGGAAATCTGTTTGACTTTTGTGTTCCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR CAA 72 bp CCTTGGTCTTCTGTGGAGTCTATTCTTCTAATCGGGTaGTTCTCCAATTTTAGTGTACAACGGGCTTGTTTC +
Preference number: 4 (lower is better)
Translates to: PWSSVESILLIG*FSNFSVQRACF
Trigger: GAAACAAGCCCGTTGTACACTAAAATTGGAGAACAACCCGATTAGAAGAATAGACTCCACAGAAGACCAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589955.2
ENST00000678349.1
CDS-3UTR TCA 90 bp TTTCCAAAAGGTTTAGGTGCATGGATTTACTCAGTATCTACACTACAGTCTTATCTGCTCTTCAGATGGTaGTCCGGCCAACAACATGGA +
Preference number: 4 (lower is better)
Translates to: FPKGLGAWIYSVSTLQSYLLFRW*SGQQHG
Trigger: TCCATGTTGTTGGCCGGATCACCATCTGAAGAGCAG...ATAAGACTGTAGTGTAGATACTGAGTAAATCCATGCACCTAAACCTTTTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp AATGCAATCCACTGTCACTCTTGCAAATTCTACCTTGGAGGGAAAAACTTAATGAGAAATGCAAGTGAATaGACACCTTCTCCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: NAIHCHSCKFYLGGKNLMRNASE*TPSPQP
Trigger: AGGCTGGGGAGAAGGTGTTCATTCACTTGCATTTCT...CATTAAGTTTTTCCCTCCAAGGTAGAATTTGCAAGAGTGACAGTGGATTGCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp ACAGCCTGCAGCTTTGTTTCATGGTACATCACTGACAATGCATATTATTTCTACTTGACAGTGGAATTCTaGGCTCCATCAGCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: TACSFVSWYITDNAYYFYLTVEF*APSASR
Trigger: TCTGGAAGCTGATGGAGCTCAGAATTCCACTGTCAA...GTAGAAATAATATGCATTGTCAGTGATGTACCATGAAACAAAGCTGCAGGCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp CCCACGGCAGATTTTCCAAAAGGTTTAGGTGCATGGATTTACTCAGTATCTACAGGGTCAATTAATCCATaGCACCTCACTTCAATGCTT +
Preference number: 4 (lower is better)
Translates to: PTADFPKGLGAWIYSVSTGSINP*HLTSML
Trigger: AAGCATTGAAGTGAGGTGTCATGGATTAATTGACCC...TGTAGATACTGAGTAAATCCATGCACCTAAACCTTTTGGAAAATCTGCCGTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp CCAACTCTTTTCCTCCCACCAGGTATGCATCATGTGAGTCATATGCAAAGAGTCTCTGTGAATCCCGTTTaGACAACAACAAAAGACAAA +
Preference number: 4 (lower is better)
Translates to: PTLFLPPGMHHVSHMQRVSVNPV*TTTKDK
Trigger: TTTGTCTTTTGTTGTTGTTCAAACGGGATTCACAGA...GACTCTTTGCATATGACTCACATGATGCATACCTGGTGGGAGGAAAAGAGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp TTCCTGATGCGGAAGTCACCGAAATGTTCACTTCCTCAAGTTCCAGAGGATTCTGTTAAGATGCAGATGTaGATCCCTCTTCAATACAAA +
Preference number: 4 (lower is better)
Translates to: FLMRKSPKCSLPQVPEDSVKMQM*IPLQYK
Trigger: TTTGTATTGAAGAGGGATTCACATCTGCATCTTAAC...AGAATCCTCTGGAACTTGAGGAAGTGAACATTTCGGTGACTTCCGCATCAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp GTAGCTGAGACTCAGGGCTTATCTCACCTTCTCAGAATGCTTTTGAAGAATCAATGTTGGCGTCTTGTTTaGACTAAATTGAGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: VAETQGLSHLLRMLLKNQCWRLV*TKLRCF
Trigger: GAAGCACCTCAATTTAGTTCAAACAAGACGCCAACA...TTGATTCTTCAAAAGCATTCTGAGAAGGTGAGATAAGCCCTGAGTCTCAGCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp GAAGGGGTACCATTTACCACCACATCCTACTGGATTACAAACGCTAGATCTTTGGAGATGCATATTTCATaGTTGTCCAAGGTCATGGTT +
Preference number: 4 (lower is better)
Translates to: EGVPFTTTSYWITNARSLEMHIS*LSKVMV
Trigger: AACCATGACCTTGGACAATCATGAAATATGCATCTC...CAAAGATCTAGCGTTTGTAATCCAGTAGGATGTGGTGGTAAATGGTACCCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678349.1
CDS-3UTR TCA 90 bp TCCATGACACCTCACTTCAATGCTTCTTTTAGGATTTGTGACCCTCTCCAAAGTGTCTCAGAATTTTCTTaGTTGAGCGAGCCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: SMTPHFNASFRICDPLQSVSEFS*LSEPFH
Trigger: ATGGAAAGGCTCGCTCAATCAAGAAAATTCTGAGAC...ACTTTGGAGAGGGTCACAAATCCTAAAAGAAGCATTGAAGTGAGGTGTCATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp AACTCAATCCCTTGCCTGCAAGAGTCCCTTTGTCTTAAAGAAGCTGCAAGGTCAAAATTAGGTCCACTCTaGGTGGTGAAAAACAAAAGA +
Preference number: 4 (lower is better)
Translates to: NSIPCLQESLCLKEAARSKLGPL*VVKNKR
Trigger: TCTTTTGTTTTTCACCACTCAGAGTGGACCTAATTT...TGACCTTGCAGCTTCTTTAAGACAAAGGGACTCTTGCAGGCAAGGGATTGAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR TCA 90 bp GAAGGGGTACCATTTACCACCACATCCTACTGGATTACAAACGCTAGATCTTTGTTTGGCCTCCTAGTATaGGCACACTTTGTAAAATGT +
Preference number: 4 (lower is better)
Translates to: EGVPFTTTSYWITNARSLFGLLV*AHFVKC
Trigger: ACATTTTACAAAGTGTGCTCATACTAGGAGGCCAAA...CAAAGATCTAGCGTTTGTAATCCAGTAGGATGTGGTGGTAAATGGTACCCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR TCA 90 bp GAAGGGGTACCATTTACCACCACATCCTACTGGATTACAAACGCTAGATCTTTGTTCCAAAGTGTCCTATaGGTGCATTTCCTGGTATAT +
Preference number: 4 (lower is better)
Translates to: EGVPFTTTSYWITNARSLFQSVL*VHFLVY
Trigger: ATATACCAGGAAATGCACTCATAGGACACTTTGGAA...CAAAGATCTAGCGTTTGTAATCCAGTAGGATGTGGTGGTAAATGGTACCCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR GCA 90 bp AAACAGCCTGCAGCTTTGTTTCATGGTACATCACTGACAATGCATATTATTTCTGCCACACCCCTCTACTaGTCTTTCTTGACAGTGGAA +
Preference number: 4 (lower is better)
Translates to: KQPAALFHGTSLTMHIISATPLY*SFLTVE
Trigger: TTCCACTGTCAAGAAAGAGCAGTAGAGGGGTGTGGC...AGAAATAATATGCATTGTCAGTGATGTACCATGAAACAAAGCTGCAGGCTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp TTCCTGATGCGGAAGTCACCGAAATGTTCACTTCCTCAAGTTCCAGAGGATTCTGAAAACGATCACCTTTaGTCACAAATAGTGTATAGG +
Preference number: 4 (lower is better)
Translates to: FLMRKSPKCSLPQVPEDSENDHL*SQIVYR
Trigger: CCTATACACTATTTGTGAGCAAAGGTGATCGTTTTC...AGAATCCTCTGGAACTTGAGGAAGTGAACATTTCGGTGACTTCCGCATCAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp GATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGAAAACGATCACCTTTaGTCACAAATAGTGTATAGG +
Preference number: 4 (lower is better)
Translates to: DPANNMESESMFTGTEHPENDHL*SQIVYR
Trigger: CCTATACACTATTTGTGAGCAAAGGTGATCGTTTTC...TGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp AATGATTTTGGCAGGATAGCAGCACAGGATTGGATATTCCATATTCATCACTTTAGAGTTTTCTGCCCCTaGCAAATCTTCGGAGACGAC +
Preference number: 4 (lower is better)
Translates to: NDFGRIAAQDWIFHIHHFRVFCP*QIFGDD
Trigger: GTCGTCTCCGAAGATTTGGCAGGGGCAGAAAACTCT...AAAGTGATGAATATGGAATATCCAATCCTGTGCTGCTATCCTGCCAAAATCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp CCTCCCACCAGGTATGCATCATGTGAGTCATATGCAAAGAGTCTCTTCTTCAGGGACATGTGTTGGGATTaGCCTGATTATTTACATTTA +
Preference number: 4 (lower is better)
Translates to: PPTRYASCESYAKSLFFRDMCWD*PDYLHL
Trigger: TAAATGTAAATAATCAGGGCAATCCCAACACATGTC...CCTGAAGAAGAGACTCTTTGCATATGACTCACATGATGCATACCTGGTGGGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp TTCCTGATGCGGAAGTCACCGAAATGTTCACTTCCTCAAGTTCCAGAGGATTCTTTGCATCCAGTGAGATaGATATTTCATGATTGTCCA +
Preference number: 4 (lower is better)
Translates to: FLMRKSPKCSLPQVPEDSLHPVR*IFHDCP
Trigger: TGGACAATCATGAAATATGCATCTCACTGGATGCAA...AGAATCCTCTGGAACTTGAGGAAGTGAACATTTCGGTGACTTCCGCATCAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp TCTCACAAATGTTCTTCAAAGCCACAGGTATCAATCACTTCAACTAAAGTAAGGGGAGCTTGTTTGGGATaGAGACTGTCAAGACCCAAC +
Preference number: 4 (lower is better)
Translates to: SHKCSSKPQVSITSTKVRGACLG*RLSRPN
Trigger: GTTGGGTCTTGACAGTCTGCATCCCAAACAAGCTCC...CCTTACTTTAGTTGAAGTGATTGATACCTGTGGCTTTGAAGAACATTTGTGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR GCA 90 bp CTGTCACTCTTGCAAATTCTACCTTGGAGGGAAAAACTTAATGAAATGAGCTATGGAGCTTGTTTGGGATaGAGACTGTCAAGACCCAAC +
Preference number: 4 (lower is better)
Translates to: LSLLQILPWREKLNEMSYGACLG*RLSRPN
Trigger: GTTGGGTCTTGACAGTCTGCATCCCAAACAAGCTCC...ATAGCTCATTTCATTAAGTTTTTCCCTCCAAGGTAGAATTTGCAAGAGTGACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678349.1
CDS-3UTR CCA 90 bp ATGGAACAGAATGATTCACTGGGTAAGACTAAAGGACTTGTATTATCACTCTCCACACGAAGCGGTGCTTaGCAATTAGTGGTCGGATTT +
Preference number: 4 (lower is better)
Translates to: MEQNDSLGKTKGLVLSLSTRSGA*QLVVGF
Trigger: AAATCCGACCACTAATTGCCAAGCACCGCTTCGTGT...GGAGAGTGATAATACAAGTCCTTTAGTCTTACCCAGTGAATCATTCTGTTCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CAGCCTGCAGCTTTGTTTCATGGTACATCACTGACAATGCATATTATTTCTACTACACGAAGCGGTGCTTaGCAATTAGTGGTCGGATTT +
Preference number: 4 (lower is better)
Translates to: QPAALFHGTSLTMHIISTTRSGA*QLVVGF
Trigger: AAATCCGACCACTAATTGCCAAGCACCGCTTCGTGT...AGTAGAAATAATATGCATTGTCAGTGATGTACCATGAAACAAAGCTGCAGGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CTTCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCAATAGCAGCACAGGATTaGATATTCCATATTCATCAC +
Preference number: 4 (lower is better)
Translates to: LQMVIRPTTWKANLCLQAIAAQD*IFHIHH
Trigger: GTGATGAATATGGAATATCCAATCCTGTGCTGCTAT...TGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GGGTGCGTATCCAAAATATATGAATATACACAATCAGGGCTTAAGGTACTGGATGAGGATCTTACCACGTaGAGCATACTGCAAACTGAC +
Preference number: 4 (lower is better)
Translates to: GCVSKIYEYTQSGLKVLDEDLTT*SILQTD
Trigger: GTCAGTTTGCAGTATGCTCCACGTGGTAAGATCCTC...ATCCAGTACCTTAAGCCCTGATTGTGTATATTCATATATTTTGGATACGCACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp ATACCCATTAGACATATCCAGCTTGAAATTTATACCATTGCACTGCCAAACGGATGTCAGCTGTCATTCTaGCCTCTCTTGCGGAGTATT +
Preference number: 4 (lower is better)
Translates to: IPIRHIQLEIYTIALPNGCQLSF*PLLRSI
Trigger: AATACTCCGCAAGAGAGGCCAGAATGACAGCTGACA...TCCGTTTGGCAGTGCAATGGTATAAATTTCAAGCTGGATATGTCTAATGGGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp AATGCAATCCACTGTCACTCTTGCAAATTCTACCTTGGAGGGAAAAACTTAATGTGTCAGCTGTCATTCTaGCCTCTCTTGCGGAGTATT +
Preference number: 4 (lower is better)
Translates to: NAIHCHSCKFYLGGKNLMCQLSF*PLLRSI
Trigger: AATACTCCGCAAGAGAGGCCAGAATGACAGCTGACA...CATTAAGTTTTTCCCTCCAAGGTAGAATTTGCAAGAGTGACAGTGGATTGCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CGAAGCGGTGCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGATGCTAATTTCCTTAGAATaGCTTGTATTTCGAGCCTTT +
Preference number: 4 (lower is better)
Translates to: RSGAWQLVVGFPKTGVLMLISLE*LVFRAF
Trigger: AAAGGCTCGAAATACAAGCCATTCTAAGGAAATTAG...CATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACCGCTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp TCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAAACAGAATGATTCACTaGGTAAGACTAAAGGACTTG +
Preference number: 4 (lower is better)
Translates to: SDGDPANNMESESMFTGTNRMIH*VRLKDL
Trigger: CAAGTCCTTTAGTCTTACCCAGTGAATCATTCTGTT...TGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GTAGCTGAGACTCAGGGCTTATCTCACCTTCTCAGAATGCTTTTGAAGAATCAATTGAAGTTATTTTTCTaGGGCAGTCCAGATGAACCG +
Preference number: 4 (lower is better)
Translates to: VAETQGLSHLLRMLLKNQLKLFF*GSPDEP
Trigger: CGGTTCATCTGGACTGCCCCAGAAAAATAACTTCAA...TTGATTCTTCAAAAGCATTCTGAGAAGGTGAGATAAGCCCTGAGTCTCAGCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp AGCGGTGCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGATGGGAAAAGGTTTAGGTGCATaGATTTACTCAGTATCTACA +
Preference number: 4 (lower is better)
Translates to: SGAWQLVVGFPKTGVLMGKGLGA*IYSVST
Trigger: TGTAGATACTGAGTAAATCCATGCACCTAAACCTTT...TCCCATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACCGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp ATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAAAGGTTTAGGTGCATaGATTTACTCAGTATCTACA +
Preference number: 4 (lower is better)
Translates to: MESESMFTGTEHPGGATRKGLGA*IYSVST
Trigger: TGTAGATACTGAGTAAATCCATGCACCTAAACCTTT...TCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CCAGAAACAATCACACCACAGCACATGACTGAAAACTCTATGAGAAATAGTGTGCAAACGCTAGATCTTTaGATCTCCACGACTAGCAAG +
Preference number: 4 (lower is better)
Translates to: PETITPQHMTENSMRNSVQTLDL*ISTTSK
Trigger: CTTGCTAGTCGTGGAGATCCAAAGATCTAGCGTTTG...CACACTATTTCTCATAGAGTTTTCAGTCATGTGCTGTGGTGTGATTGTTTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR CCA 90 bp TCTCACAAATGTTCTTCAAAGCCACAGGTATCAATCACTTCAACTAAAGTAAGGGAACATGGCACACACTaGAGATTCCAGTCCAAGGAC +
Preference number: 4 (lower is better)
Translates to: SHKCSSKPQVSITSTKVREHGTH*RFQSKD
Trigger: GTCCTTGGACTGGAATCTCCAGTGTGTGCCATGTTC...CCTTACTTTAGTTGAAGTGATTGATACCTGTGGCTTTGAAGAACATTTGTGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR CCA 90 bp TCTCACAAATGTTCTTCAAAGCCACAGGTATCAATCACTTCAACTAAAGTAAGGGTAGTATTCAGGAGATaGGCTAATCCACGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: SHKCSSKPQVSITSTKVRVVFRR*ANPRSP
Trigger: AGGGCTCCGTGGATTAGCCCATCTCCTGAATACTAC...CCTTACTTTAGTTGAAGTGATTGATACCTGTGGCTTTGAAGAACATTTGTGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR CCA 90 bp TTCCTGATGCGGAAGTCACCGAAATGTTCACTTCCTCAAGTTCCAGAGGATTCTCCACAAAGGCATCATTaGTTTTCCTCTTTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: FLMRKSPKCSLPQVPEDSPQRHH*FSSFGK
Trigger: TTTTCCAAAAGAGGAAAACCAATGATGCCTTTGTGG...AGAATCCTCTGGAACTTGAGGAAGTGAACATTTCGGTGACTTCCGCATCAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678349.1
3UTR CAA 72 bp GTGAGATGCATATTTCATGATTGTCCAAGGTCATGGTaGTCCAAAGACATGGAACAGAATGATTCACTGGGT +
Preference number: 4 (lower is better)
Translates to: VRCIFHDCPRSW*SKDMEQNDSLG
Trigger: ACCCAGTGAATCATTCTGTTCCATGTCTTTGGACAACCATGACCTTGGACAATCATGAAATATGCATCTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp AAACATGCATGTAATCCTGAATACCATGAATTAAATGCGGAATTGCCCAGGGACGTTTCCCCCTTGGCATaGGATGCAGGAAATTTTTAT +
Preference number: 4 (lower is better)
Translates to: KHACNPEYHELNAELPRDVSPLA*DAGNFY
Trigger: ATAAAAATTTCCTGCATCTCATGCCAAGGGGGAAAC...GTCCCTGGGCAATTCCGCATTTAATTCATGGTATTCAGGATTACATGCATGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000333681.5
ENST00000398117.1
CDS-3UTR TCA 90 bp AAACAGCCTGCAGCTTTGTTTCATGGTACATCACTGACAATGCATATTATTTCTAGAAATGCAAGTGAATaGACACCTTCTCCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: KQPAALFHGTSLTMHIISRNASE*TPSPQP
Trigger: AGGCTGGGGAGAAGGTGTTCATTCACTTGCATTTCT...AGAAATAATATGCATTGTCAGTGATGTACCATGAAACAAAGCTGCAGGCTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp ACAGCCTGCAGCTTTGTTTCATGGTACATCACTGACAATGCATATTATTTCTACGCAAAGAAATGCAAGTaGATGAACACCTTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: TACSFVSWYITDNAYYFYAKKCK*MNTFSP
Trigger: TGGGGAGAAGGTGTTCATTCACTTGCATTTCTTTGC...GTAGAAATAATATGCATTGTCAGTGATGTACCATGAAACAAAGCTGCAGGCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp GTGAGATGCATATTTCATGATTGTCCAAGGTCATGGTTGTCCAAAGACATGGAACAGGTATGCATCATGTaGGTCATATGCAAAGAGTCT +
Preference number: 4 (lower is better)
Translates to: VRCIFHDCPRSWLSKDMEQVCIM*VICKES
Trigger: AGACTCTTTGCATATGACTCACATGATGCATACCTG...TTCCATGTCTTTGGACAACCATGACCTTGGACAATCATGAAATATGCATCTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp TTCTACTGCTTTAGTGAACCTTTTGCATATTTGTTTGGGGCAGGCATGTTGACTCAGGTATGCATCATGTaGGTCATATGCAAAGAGTCT +
Preference number: 4 (lower is better)
Translates to: FYCFSEPFAYLFGAGMLTQVCIM*VICKES
Trigger: AGACTCTTTGCATATGACTCACATGATGCATACCTG...AGTCAACATGCCTGCCCCAAACAAATATGCAAAAGGTTCACTAAAGCAGTAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp AATGATTTTGGCAGGATAGCAGCACAGGATTGGATATTCCATATTCATCACTTTGGTACTAGGTCCATCTaGAGTTCCCAACTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: NDFGRIAAQDWIFHIHHFGTRSI*SSQLFS
Trigger: GGAAAAGAGTTGGGAACTTCAGATGGACCTAGTACC...AAAGTGATGAATATGGAATATCCAATCCTGTGCTGCTATCCTGCCAAAATCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp GGGTGCGTATCCAAAATATATGAATATACACAATCAGGGCTTAAGGTACTGGATAATAGATCCTGGAGGTaGAAGCTAGACATGTGTTGG +
Preference number: 4 (lower is better)
Translates to: GCVSKIYEYTQSGLKVLDNRSWR*KLDMCW
Trigger: CCAACACATGTCTAGCTTTCACCTCCAGGATCTATT...ATCCAGTACCTTAAGCCCTGATTGTGTATATTCATATATTTTGGATACGCACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp GCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGATGGGACTGTCTTAAATAAACTTCCAACTCCCTaGTCCAAACTTGGGAATGTT +
Preference number: 4 (lower is better)
Translates to: AISGRISKDRSFDGTVLNKLPTP*SKLGNV
Trigger: AACATTCCCAAGTTTGGATCAGGGAGTTGGAAGTTT...ATTTAAGACAGTCCCATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp GCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGATGGGACTGTCTTAAATCATTCATGCTCCATCTaGTTTTCTTTGCATCCAGTG +
Preference number: 4 (lower is better)
Translates to: AISGRISKDRSFDGTVLNHSCSI*FSLHPV
Trigger: CACTGGATGCAAAGAAAATCAGATGGAGCATGAATG...ATTTAAGACAGTCCCATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp GTCACCGAAATGTTCACTTCCTCAAGTTCCAGAGGATTCTGTTTCTTACTCAGAGATAGGATGTTTGCTTaGAGTTATTTTTCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: VTEMFTSSSSRGFCFLLRDRMFA*SYFSGA
Trigger: TGCCCCAGAAAAATAACTTCAAGCAAACATCCTATC...TCTGAGTAAGAAACAGAATCCTCTGGAACTTGAGGAAGTGAACATTTCGGTGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp AATGCAATCCACTGTCACTCTTGCAAATTCTACCTTGGAGGGAAAAACTTAATGCAGAATTTTCTTGATTaGGCGAGCCTTTCCATCCTC +
Preference number: 4 (lower is better)
Translates to: NAIHCHSCKFYLGGKNLMQNFLD*ASLSIL
Trigger: GAGGATGGAAAGGCTCGCTCAATCAAGAAAATTCTG...CATTAAGTTTTTCCCTCCAAGGTAGAATTTGCAAGAGTGACAGTGGATTGCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp CACAATGCCTTATTCAGACCTAGGAATAAATCCACACTCCACTCTACAGCCAATGTCCACTCTGAGTGGTaGAAAACAAAAGATTCTAAC +
Preference number: 4 (lower is better)
Translates to: HNALFRPRNKSTLHSTANVHSEW*KTKDSN
Trigger: GTTAGAATCTTTTGTTTTTCACCACTCAGAGTGGAC...ATTGGCTGTAGAGTGGAGTGTGGATTTATTCCTAGGTCTGAATAAGGCATTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR TCA 90 bp GTTATGGAACACAAAAGTCAAACAGATTTCCTCAGCCTCACAAGGTTCCAATTTCAATCTATCAGAGGCTaGTCATTCCAAGGACCTGAT +
Preference number: 4 (lower is better)
Translates to: VMEHKSQTDFLSLTRFQFQSIRG*SFQGPD
Trigger: ATCAGGTCCTTGGAATGATCAGCCTCTGATAGATTG...AAATTGGAACCTTGTGAGGCTGAGGAAATCTGTTTGACTTTTGTGTTCCATAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR GCA 90 bp ATAGCTGATTCGACGTTTTGCCTGAAGACTGTTAATTGTTGTGTGTGTGTGTGTCGATTCCCAGACTTCTaGTTCACAGAAATGTCAATC +
Preference number: 4 (lower is better)
Translates to: IADSTFCLKTVNCCVCVCRFPDF*FTEMSI
Trigger: GATTGACATTTCTGTGAAGCAGAAGTCTGGGAATCG...ACACACACACACACAACAATTAACAGTCTTCAGGCAAAACGTCGAATCAGCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333681.5
ENST00000398117.1
CDS-3UTR GCA 90 bp ACGTTTTGCCTGAAGACTGTTAATTGTTGTGTGTGTGTGTGTCTGTCTGTGTGTGCTGATTCGACGTTTTaGCTGAAGACTGTTAATTGT +
Preference number: 4 (lower is better)
Translates to: TFCLKTVNCCVCVCLSVCADSTF*LKTVNC
Trigger: ACAATTAACAGTCTTCAGGCAAAACGTCGAATCAGC...ACACACAGACAGACACACACACACACAACAATTAACAGTCTTCAGGCAAAACGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp GATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGACATGTGTTGGGATTaGCCTGATTATTTACATTTA +
Preference number: 4 (lower is better)
Translates to: DPANNMESESMFTGTEHPDMCWD*PDYLHL
Trigger: TAAATGTAAATAATCAGGGCAATCCCAACACATGTC...TGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp ATACCCATTAGACATATCCAGCTTGAAATTTATACCATTGCACTGCCAAACGGATGTTCCCATCTTCTGTaGTCAGCTTGGTATGCAGAA +
Preference number: 4 (lower is better)
Translates to: IPIRHIQLEIYTIALPNGCSHLL*SAWYAE
Trigger: TTCTGCATACCAAGCTGAGCACAGAAGATGGGAACA...TCCGTTTGGCAGTGCAATGGTATAAATTTCAAGCTGGATATGTCTAATGGGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp ATAGCTGATTCGACGTTTTGCCTGAAGACTGTTAATTGTTGTGTGTGTGTGTGTCTTCCCCAAAAGAAATaGAATCCACTGTCACTCTTG +
Preference number: 4 (lower is better)
Translates to: IADSTFCLKTVNCCVCVCLPQKK*NPLSLL
Trigger: CAAGAGTGACAGTGGATTGCATTTCTTTTGGGGAAG...ACACACACACACACAACAATTAACAGTCTTCAGGCAAAACGTCGAATCAGCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CTTAAACAGCCTGCAGCTTTGTTTCATGGTACATCACTGACAATGCATATTATTTGTGCTTTGCATTCTTaGACGAGGGGGTGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: LKQPAALFHGTSLTMHIICALHS*TRGCLQ
Trigger: TTGAAGACACCCCCTCGTCCAAGAATGCAAAGCACA...AATAATATGCATTGTCAGTGATGTACCATGAAACAAAGCTGCAGGCTGTTTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333681.5
ENST00000398117.1
CDS-3UTR CCA 90 bp CCAACTCTTTTCCTCCCACCAGGTATGCATCATGTGAGTCATATGCAAAGAGTCCAGGGCTTAAGGTACTaGATGATATTGTATAAATTG +
Preference number: 4 (lower is better)
Translates to: PTLFLPPGMHHVSHMQRVQGLRY*MILYKL
Trigger: CAATTTATACAATATCATCCAGTACCTTAAGCCCTG...GACTCTTTGCATATGACTCACATGATGCATACCTGGTGGGAGGAAAAGAGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp TTGCCCAGGGACGAGGAAACCTTCAAGAAACAAGGTCAAAGGGACAACAGATATCAGGGCTTAAGGTACTaGATGATATTGTATAAATTG +
Preference number: 4 (lower is better)
Translates to: LPRDEETFKKQGQRDNRYQGLRY*MILYKL
Trigger: CAATTTATACAATATCATCCAGTACCTTAAGCCCTG...ATATCTGTTGTCCCTTTGACCTTGTTTCTTGAAGGTTTCCTCGTCCCTGGGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp AATGATTTTGGCAGGATAGCAGCACAGGATTGGATATTCCATATTCATCACTTTAACAAAGCTCCTCAGTaGCCAGTGACATCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: NDFGRIAAQDWIFHIHHFNKAPQ*PVTSRF
Trigger: AAACCTGGATGTCACTGGCCACTGAGGAGCTTTGTT...AAAGTGATGAATATGGAATATCCAATCCTGTGCTGCTATCCTGCCAAAATCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp TTCTACTGCTTTAGTGAACCTTTTGCATATTTGTTTGGGGCAGGCATGTTGACTCCTAATTTTTCCCACTaGGCCAGAGCTACATCTTTA +
Preference number: 4 (lower is better)
Translates to: FYCFSEPFAYLFGAGMLTPNFSH*ARATSL
Trigger: TAAAGATGTAGCTCTGGCCCAGTGGGAAAAATTAGG...AGTCAACATGCCTGCCCCAAACAAATATGCAAAAGGTTCACTAAAGCAGTAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCACTAATTTCCTTAGAATaGCTTGTATTTCGAGCCTTT +
Preference number: 4 (lower is better)
Translates to: DPANNMESESMFTGTEHPLISLE*LVFRAF
Trigger: AAAGGCTCGAAATACAAGCCATTCTAAGGAAATTAG...TGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp CAGCCTGCAGCTTTGTTTCATGGTACATCACTGACAATGCATATTATTTCTACTGTAACCACATTTGTCTaGGCTGCAAAAGACACCACA +
Preference number: 4 (lower is better)
Translates to: QPAALFHGTSLTMHIISTVTTFV*AAKDTT
Trigger: TGTGGTGTCTTTTGCAGCCCAGACAAATGTGGTTAC...AGTAGAAATAATATGCATTGTCAGTGATGTACCATGAAACAAAGCTGCAGGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp ATACCCATTAGACATATCCAGCTTGAAATTTATACCATTGCACTGCCAAACGGACTTCTGTGCTCAGCTTaGTATGCAGAACAACCTTGT +
Preference number: 4 (lower is better)
Translates to: IPIRHIQLEIYTIALPNGLLCSA*YAEQPC
Trigger: ACAAGGTTGTTCTGCATACCAAGCTGAGCACAGAAG...TCCGTTTGGCAGTGCAATGGTATAAATTTCAAGCTGGATATGTCTAATGGGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp AAACATGCATGTAATCCTGAATACCATGAATTAAATGCGGAATTGCCCAGGGACTTAAAGACTTTTAGATaGCAGGCGTTATCGGTCAGG +
Preference number: 4 (lower is better)
Translates to: KHACNPEYHELNAELPRDLKTFR*QALSVR
Trigger: CCTGACCGATAACGCCTGCCATCTAAAAGTCTTTAA...GTCCCTGGGCAATTCCGCATTTAATTCATGGTATTCAGGATTACATGCATGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678349.1
CDS-3UTR CCA 90 bp ATGCATATTATTTCTACTGCTTTAGTGAACCTTTTGCATATTTGTTTGGGGCAGTCAGGGGAGCTTGTTTaGGATGCAGACTGTCAAGAC +
Preference number: 4 (lower is better)
Translates to: MHIISTALVNLLHICLGQSGELV*DADCQD
Trigger: GTCTTGACAGTCTGCATCCCAAACAAGCTCCCCTGA...CTGCCCCAAACAAATATGCAAAAGGTTCACTAAAGCAGTAGAAATAATATGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000678349.1
CDS-3UTR CCA 90 bp GAAGGGGTACCATTTACCACCACATCCTACTGGATTACAAACGCTAGATCTTTGTTGCAGTCTAAAGCCTaGAGTATTCAGTGTAGTATT +
Preference number: 4 (lower is better)
Translates to: EGVPFTTTSYWITNARSLLQSKA*SIQCSI
Trigger: AATACTACACTGAATACTCCAGGCTTTAGACTGCAA...CAAAGATCTAGCGTTTGTAATCCAGTAGGATGTGGTGGTAAATGGTACCCCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR CCA 90 bp AATCAAATGTTTTGCTGGATGTGGACTGCCTTGAGAAAGGAAAAACTGCTTGCTACAATAGTGGACACCTaGGAAATACTCGGTATTCCA +
Preference number: 4 (lower is better)
Translates to: NQMFCWMWTALRKEKLLATIVDT*EILGIP
Trigger: TGGAATACCGAGTATTTCCCAGGTGTCCACTATTGT...AGCAAGCAGTTTTTCCTTTCTCAAGGCAGTCCACATCCAGCAAAACATTTGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR CCA 90 bp AATCAAATGTTTTGCTGGATGTGGACTGCCTTGAGAAAGGAAAAACTGCTTGCTATGTTTTGCTGGATGTaGACTGCCTTGAGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: NQMFCWMWTALRKEKLLAMFCWM*TALRKE
Trigger: TTCCTTTCTCAAGGCAGTCCACATCCAGCAAAACAT...AGCAAGCAGTTTTTCCTTTCTCAAGGCAGTCCACATCCAGCAAAACATTTGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR TCA 90 bp CTGTCACTCTTGCAAATTCTACCTTGGAGGGAAAAACTTAATGAAATGAGCTATGCAGGAATCCTCTTCTaGTTAAACTCCGAACAGCAA +
Preference number: 4 (lower is better)
Translates to: LSLLQILPWREKLNEMSYAGILF*LNSEQQ
Trigger: TTGCTGTTCGGAGTTTAATCAGAAGAGGATTCCTGC...ATAGCTCATTTCATTAAGTTTTTCCCTCCAAGGTAGAATTTGCAAGAGTGACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333681.5
ENST00000398117.1
CDS-3UTR TCA 90 bp ATGGAACAGAATGATTCACTGGGTAAGACTAAAGGACTTGTATTATCACTCTCCTTGGCAGTAAATAGCTaGTTCGACGTTTTGCCTGAA +
Preference number: 4 (lower is better)
Translates to: MEQNDSLGKTKGLVLSLSLAVNS*FDVLPE
Trigger: TTCAGGCAAAACGTCGAATCAGCTATTTACTGCCAA...GGAGAGTGATAATACAAGTCCTTTAGTCTTACCCAGTGAATCATTCTGTTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp GGGTGCGTATCCAAAATATATGAATATACACAATCAGGGCTTAAGGTACTGGATCAGGTATGCATCATGTaGGTCATATGCAAAGAGTCT +
Preference number: 4 (lower is better)
Translates to: GCVSKIYEYTQSGLKVLDQVCIM*VICKES
Trigger: AGACTCTTTGCATATGACTCACATGATGCATACCTG...ATCCAGTACCTTAAGCCCTGATTGTGTATATTCATATATTTTGGATACGCACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp GTAGCTGAGACTCAGGGCTTATCTCACCTTCTCAGAATGCTTTTGAAGAATCAACACAGCATTAAACATTaGACAGAGTACATTCCAAAG +
Preference number: 4 (lower is better)
Translates to: VAETQGLSHLLRMLLKNQHSIKH*TEYIPK
Trigger: CTTTGGAATGTACTCTGTTCAATGTTTAATGCTGTG...TTGATTCTTCAAAAGCATTCTGAGAAGGTGAGATAAGCCCTGAGTCTCAGCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp GTAGCTGAGACTCAGGGCTTATCTCACCTTCTCAGAATGCTTTTGAAGAATCAAGTTAAGATGCAGATGTaGATCCCTCTTCAATACAAA +
Preference number: 4 (lower is better)
Translates to: VAETQGLSHLLRMLLKNQVKMQM*IPLQYK
Trigger: TTTGTATTGAAGAGGGATTCACATCTGCATCTTAAC...TTGATTCTTCAAAAGCATTCTGAGAAGGTGAGATAAGCCCTGAGTCTCAGCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp AAACAGCCTGCAGCTTTGTTTCATGGTACATCACTGACAATGCATATTATTTCTAATAGATCCTGGAGGTaGAAGCTAGACATGTGTTGG +
Preference number: 4 (lower is better)
Translates to: KQPAALFHGTSLTMHIISNRSWR*KLDMCW
Trigger: CCAACACATGTCTAGCTTTCACCTCCAGGATCTATT...AGAAATAATATGCATTGTCAGTGATGTACCATGAAACAAAGCTGCAGGCTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp CAGCCTGCAGCTTTGTTTCATGGTACATCACTGACAATGCATATTATTTCTACTAAACTTCCAACTCCCTaGTCCAAACTTGGGAATGTT +
Preference number: 4 (lower is better)
Translates to: QPAALFHGTSLTMHIISTKLPTP*SKLGNV
Trigger: AACATTCCCAAGTTTGGATCAGGGAGTTGGAAGTTT...AGTAGAAATAATATGCATTGTCAGTGATGTACCATGAAACAAAGCTGCAGGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp GGGTGCGTATCCAAAATATATGAATATACACAATCAGGGCTTAAGGTACTGGATAAACTTCCAACTCCCTaGTCCAAACTTGGGAATGTT +
Preference number: 4 (lower is better)
Translates to: GCVSKIYEYTQSGLKVLDKLPTP*SKLGNV
Trigger: AACATTCCCAAGTTTGGATCAGGGAGTTGGAAGTTT...ATCCAGTACCTTAAGCCCTGATTGTGTATATTCATATATTTTGGATACGCACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp AGATGCATATTTCATGATTGTCCAAGGTCATGGTTGTCCAAAGACATGGAACAGGATAGGATGTTTGCTTaGAGTTATTTTTCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: RCIFHDCPRSWLSKDMEQDRMFA*SYFSGA
Trigger: TGCCCCAGAAAAATAACTTCAAGCAAACATCCTATC...CTGTTCCATGTCTTTGGACAACCATGACCTTGGACAATCATGAAATATGCATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp TCTCACAAATGTTCTTCAAAGCCACAGGTATCAATCACTTCAACTAAAGTAAGGATGTGGTGTGCTTCTTaGCATCTAATCCACTTGCAG +
Preference number: 4 (lower is better)
Translates to: SHKCSSKPQVSITSTKVRMWCAS*HLIHLQ
Trigger: CTGCAAGTGGATTAGATGTCAAGAAGCACACCACAT...CCTTACTTTAGTTGAAGTGATTGATACCTGTGGCTTTGAAGAACATTTGTGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR GCA 90 bp CAGCCTGCAGCTTTGTTTCATGGTACATCACTGACAATGCATATTATTTCTACTCCACGTGGAGCATACTaGAAACTGACTCCATTAAAA +
Preference number: 4 (lower is better)
Translates to: QPAALFHGTSLTMHIISTPRGAY*KLTPLK
Trigger: TTTTAATGGAGTCAGTTTGCAGTATGCTCCACGTGG...AGTAGAAATAATATGCATTGTCAGTGATGTACCATGAAACAAAGCTGCAGGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp GCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGATGGGACTGTCTTAAATAAAGAGCAGTTAAGATaGAGATGTGAATCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: AISGRISKDRSFDGTVLNKEQLR*RCESLF
Trigger: GAAGAGGGATTCACATCTGCATCTTAACTGCTCTTT...ATTTAAGACAGTCCCATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp ACAGCCTGCAGCTTTGTTTCATGGTACATCACTGACAATGCATATTATTTCTACCACATTTGTCTGGGCTaGAAAAGACACCACAGAATA +
Preference number: 4 (lower is better)
Translates to: TACSFVSWYITDNAYYFYHICLG*KRHHRI
Trigger: TATTCTGTGGTGTCTTTTGCAGCCCAGACAAATGTG...GTAGAAATAATATGCATTGTCAGTGATGTACCATGAAACAAAGCTGCAGGCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp GGGTGCGTATCCAAAATATATGAATATACACAATCAGGGCTTAAGGTACTGGATCACATTTGTCTGGGCTaGAAAAGACACCACAGAATA +
Preference number: 4 (lower is better)
Translates to: GCVSKIYEYTQSGLKVLDHICLG*KRHHRI
Trigger: TATTCTGTGGTGTCTTTTGCAGCCCAGACAAATGTG...ATCCAGTACCTTAAGCCCTGATTGTGTATATTCATATATTTTGGATACGCACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp CAGCCTGCAGCTTTGTTTCATGGTACATCACTGACAATGCATATTATTTCTACTCACATTTGTCTGGGCTaGAAAAGACACCACAGAATA +
Preference number: 4 (lower is better)
Translates to: QPAALFHGTSLTMHIISTHICLG*KRHHRI
Trigger: TATTCTGTGGTGTCTTTTGCAGCCCAGACAAATGTG...AGTAGAAATAATATGCATTGTCAGTGATGTACCATGAAACAAAGCTGCAGGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp AATGCAATCCACTGTCACTCTTGCAAATTCTACCTTGGAGGGAAAAACTTAATGTTTATACCATTGCACTaGCAAACGGAGCTGCACTTT +
Preference number: 4 (lower is better)
Translates to: NAIHCHSCKFYLGGKNLMFIPLH*QTELHF
Trigger: AAAGTGCAGCTCCGTTTGGCAGTGCAATGGTATAAA...CATTAAGTTTTTCCCTCCAAGGTAGAATTTGCAAGAGTGACAGTGGATTGCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGATGGGACTGTCTTAAATGAAATGCACATGACTTaGTTGAAACAAAGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: AISGRISKDRSFDGTVLNEMHMT*LKQSSS
Trigger: TGAGGAGCTTTGTTTCAACCAAGTCATGTGCATTTC...ATTTAAGACAGTCCCATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp TTTCCAAAAGGTTTAGGTGCATGGATTTACTCAGTATCTACACTACAGTCTTATCTGGGGCCAAGAGGCTaGGCACATTTACTGTTATTA +
Preference number: 4 (lower is better)
Translates to: FPKGLGAWIYSVSTLQSYLGPRG*AHLLLL
Trigger: TAATAACAGTAAATGTGCCCAGCCTCTTGGCCCCAG...ATAAGACTGTAGTGTAGATACTGAGTAAATCCATGCACCTAAACCTTTTGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp AGCTTGGAGGATCTTACCACGTGGAGCATACTGCAAACTGACTCCATTAAAATGCTAATTTCCTTAGAATaGCTTGTATTTCGAGCCTTT +
Preference number: 4 (lower is better)
Translates to: SLEDLTTWSILQTDSIKMLISLE*LVFRAF
Trigger: AAAGGCTCGAAATACAAGCCATTCTAAGGAAATTAG...CATTTTAATGGAGTCAGTTTGCAGTATGCTCCACGTGGTAAGATCCTCCAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GTTATGGAACACAAAAGTCAAACAGATTTCCTCAGCCTCACAAGGTTCCAATTTACCACCACATCCTACTaGATTACAAACGCTAGATCT +
Preference number: 4 (lower is better)
Translates to: VMEHKSQTDFLSLTRFQFTTTSY*ITNARS
Trigger: AGATCTAGCGTTTGTAATCCAGTAGGATGTGGTGGT...AAATTGGAACCTTGTGAGGCTGAGGAAATCTGTTTGACTTTTGTGTTCCATAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR CCA 90 bp AATCAAATGTTTTGCTGGATGTGGACTGCCTTGAGAAAGGAAAAACTGCTTGCTAATCAAATGTTTTGCTaGATGTGGACTGCCTTGAGA +
Preference number: 4 (lower is better)
Translates to: NQMFCWMWTALRKEKLLANQMFC*MWTALR
Trigger: TCTCAAGGCAGTCCACATCCAGCAAAACATTTGATT...AGCAAGCAGTTTTTCCTTTCTCAAGGCAGTCCACATCCAGCAAAACATTTGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR CAA 72 bp CAAGCTATTTTTAATCCTATCGTCTTGCTGCCAAAATaGGCCATAAGCAGCCAATCCTCAGACACTAGAAAA +
Preference number: 4 (lower is better)
Translates to: QAIFNPIVLLPK*AISSQSSDTRK
Trigger: TTTTCTAGTGTCTGAGGATTGGCTGCTTATGGCCAATTTTGGCAGCAAGACGATAGGATTAAAAATAGCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR CAA 72 bp CTAGATCATCTTCAAGCTATTTTTAATCCTATCGTCTaGCTGCCAAAATTGGCCATAAGCAGCCAATCCTCA +
Preference number: 4 (lower is better)
Translates to: LDHLQAIFNPIV*LPKLAISSQSS
Trigger: TGAGGATTGGCTGCTTATGGCCAATTTTGGCAGCAAGACGATAGGATTAAAAATAGCTTGAAGATGATCTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589955.2
3UTR CAA 72 bp TATTATTTCTACTGCTTTAGTGAACCTTTTGCATATTaGTTTGGGGCAGGCATGTTGACTTCACTTGTGGCC +
Preference number: 4 (lower is better)
Translates to: YYFYCFSEPFAY*FGAGMLTSLVA
Trigger: GGCCACAAGTGAAGTCAACATGCCTGCCCCAAACAAATATGCAAAAGGTTCACTAAAGCAGTAGAAATAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR TCA 90 bp ATGGAACAGAATGATTCACTGGGTAAGACTAAAGGACTTGTATTATCACTCTCCATTCGACGTTTTGCCTaGAGACTGTTAATTGTTGTG +
Preference number: 4 (lower is better)
Translates to: MEQNDSLGKTKGLVLSLSIRRFA*RLLIVV
Trigger: CACAACAATTAACAGTCTTCAGGCAAAACGTCGAAT...GGAGAGTGATAATACAAGTCCTTTAGTCTTACCCAGTGAATCATTCTGTTCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp GGGTGCGTATCCAAAATATATGAATATACACAATCAGGGCTTAAGGTACTGGATATTCGACGTTTTGCCTaGAGACTGTTAATTGTTGTG +
Preference number: 4 (lower is better)
Translates to: GCVSKIYEYTQSGLKVLDIRRFA*RLLIVV
Trigger: CACAACAATTAACAGTCTTCAGGCAAAACGTCGAAT...ATCCAGTACCTTAAGCCCTGATTGTGTATATTCATATATTTTGGATACGCACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp CTTAAACAGCCTGCAGCTTTGTTTCATGGTACATCACTGACAATGCATATTATTGGGTCAATTAATCCATaGCACCTCACTTCAATGCTT +
Preference number: 4 (lower is better)
Translates to: LKQPAALFHGTSLTMHIIGSINP*HLTSML
Trigger: AAGCATTGAAGTGAGGTGTCATGGATTAATTGACCC...AATAATATGCATTGTCAGTGATGTACCATGAAACAAAGCTGCAGGCTGTTTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp TTTTTAGAGCCCTTGTCCCCAATTTGGAAAGTGCATATACTCTATTTAACTCTGGGGTCAATTAATCCATaGCACCTCACTTCAATGCTT +
Preference number: 4 (lower is better)
Translates to: FLEPLSPIWKVHILYLTLGSINP*HLTSML
Trigger: AAGCATTGAAGTGAGGTGTCATGGATTAATTGACCC...CAGAGTTAAATAGAGTATATGCACTTTCCAAATTGGGGACAAGGGCTCTAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp ATAGCTGATTCGACGTTTTGCCTGAAGACTGTTAATTGTTGTGTGTGTGTGTGTGTTAAGATGCAGATGTaGATCCCTCTTCAATACAAA +
Preference number: 4 (lower is better)
Translates to: IADSTFCLKTVNCCVCVCVKMQM*IPLQYK
Trigger: TTTGTATTGAAGAGGGATTCACATCTGCATCTTAAC...ACACACACACACACAACAATTAACAGTCTTCAGGCAAAACGTCGAATCAGCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp CTGTCACTCTTGCAAATTCTACCTTGGAGGGAAAAACTTAATGAAATGAGCTATAAACTTCCAACTCCCTaGTCCAAACTTGGGAATGTT +
Preference number: 4 (lower is better)
Translates to: LSLLQILPWREKLNEMSYKLPTP*SKLGNV
Trigger: AACATTCCCAAGTTTGGATCAGGGAGTTGGAAGTTT...ATAGCTCATTTCATTAAGTTTTTCCCTCCAAGGTAGAATTTGCAAGAGTGACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp TATGGAACACAAAAGTCAAACAGATTTCCTCAGCCTCACAAGGTTCCAATTTTCATGCTAGCTCTCTTCTaGAGCTTTACCATTAAGACT +
Preference number: 4 (lower is better)
Translates to: YGTQKSNRFPQPHKVPIFMLALF*SFTIKT
Trigger: AGTCTTAATGGTAAAGCTTCAGAAGAGAGCTAGCAT...GAAAATTGGAACCTTGTGAGGCTGAGGAAATCTGTTTGACTTTTGTGTTCCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR GCA 90 bp TTTTTAGAGCCCTTGTCCCCAATTTGGAAAGTGCATATACTCTATTTAACTCTGTTTATACCATTGCACTaGCAAACGGAGCTGCACTTT +
Preference number: 4 (lower is better)
Translates to: FLEPLSPIWKVHILYLTLFIPLH*QTELHF
Trigger: AAAGTGCAGCTCCGTTTGGCAGTGCAATGGTATAAA...CAGAGTTAAATAGAGTATATGCACTTTCCAAATTGGGGACAAGGGCTCTAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp TTCTACTGCTTTAGTGAACCTTTTGCATATTTGTTTGGGGCAGGCATGTTGACTTTGCATCCAGTGAGATaGATATTTCATGATTGTCCA +
Preference number: 4 (lower is better)
Translates to: FYCFSEPFAYLFGAGMLTLHPVR*IFHDCP
Trigger: TGGACAATCATGAAATATGCATCTCACTGGATGCAA...AGTCAACATGCCTGCCCCAAACAAATATGCAAAAGGTTCACTAAAGCAGTAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp AGATGCATATTTCATGATTGTCCAAGGTCATGGTTGTCCAAAGACATGGAACAGTCCAAAAGGTTTAGGTaGATGGATTTACTCAGTATC +
Preference number: 4 (lower is better)
Translates to: RCIFHDCPRSWLSKDMEQSKRFR*MDLLSI
Trigger: GATACTGAGTAAATCCATGCACCTAAACCTTTTGGA...CTGTTCCATGTCTTTGGACAACCATGACCTTGGACAATCATGAAATATGCATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp AAACATGCATGTAATCCTGAATACCATGAATTAAATGCGGAATTGCCCAGGGACATAGCAGCACAGGATTaGATATTCCATATTCATCAC +
Preference number: 4 (lower is better)
Translates to: KHACNPEYHELNAELPRDIAAQD*IFHIHH
Trigger: GTGATGAATATGGAATATCCAATCCTGTGCTGCTAT...GTCCCTGGGCAATTCCGCATTTAATTCATGGTATTCAGGATTACATGCATGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp AAACAGCCTGCAGCTTTGTTTCATGGTACATCACTGACAATGCATATTATTTCTGGTTGTCCAAAGACATaGAACAGAATGATTCACTGG +
Preference number: 4 (lower is better)
Translates to: KQPAALFHGTSLTMHIISGCPKT*NRMIHW
Trigger: CCAGTGAATCATTCTGTTCCATGTCTTTGGACAACC...AGAAATAATATGCATTGTCAGTGATGTACCATGAAACAAAGCTGCAGGCTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp TTTCCAAAAGGTTTAGGTGCATGGATTTACTCAGTATCTACACTACAGTCTTATCAGGTATGCATCATGTaGGTCATATGCAAAGAGTCT +
Preference number: 4 (lower is better)
Translates to: FPKGLGAWIYSVSTLQSYQVCIM*VICKES
Trigger: AGACTCTTTGCATATGACTCACATGATGCATACCTG...ATAAGACTGTAGTGTAGATACTGAGTAAATCCATGCACCTAAACCTTTTGGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR TCA 90 bp ACAGCCTGCAGCTTTGTTTCATGGTACATCACTGACAATGCATATTATTTCTACGTTAAGATGCAGATGTaGATCCCTCTTCAATACAAA +
Preference number: 4 (lower is better)
Translates to: TACSFVSWYITDNAYYFYVKMQM*IPLQYK
Trigger: TTTGTATTGAAGAGGGATTCACATCTGCATCTTAAC...GTAGAAATAATATGCATTGTCAGTGATGTACCATGAAACAAAGCTGCAGGCTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp ATGGAACAGAATGATTCACTGGGTAAGACTAAAGGACTTGTATTATCACTCTCCTCCAAAAGGTTTAGGTaGATGGATTTACTCAGTATC +
Preference number: 4 (lower is better)
Translates to: MEQNDSLGKTKGLVLSLSSKRFR*MDLLSI
Trigger: GATACTGAGTAAATCCATGCACCTAAACCTTTTGGA...GGAGAGTGATAATACAAGTCCTTTAGTCTTACCCAGTGAATCATTCTGTTCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp CCAGAAACAATCACACCACAGCACATGACTGAAAACTCTATGAGAAATAGTGTGGAAAATCTGTCTGTATaGCAAATGCCTAAAATGACT +
Preference number: 4 (lower is better)
Translates to: PETITPQHMTENSMRNSVENLSV*QMPKMT
Trigger: AGTCATTTTAGGCATTTGGCATACAGACAGATTTTC...CACACTATTTCTCATAGAGTTTTCAGTCATGTGCTGTGGTGTGATTGTTTCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR CCA 90 bp AATGATTTTGGCAGGATAGCAGCACAGGATTGGATATTCCATATTCATCACTTTGAAATGCACATGACTTaGTTGAAACAAAGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: NDFGRIAAQDWIFHIHHFEMHMT*LKQSSS
Trigger: TGAGGAGCTTTGTTTCAACCAAGTCATGTGCATTTC...AAAGTGATGAATATGGAATATCCAATCCTGTGCTGCTATCCTGCCAAAATCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
3UTR CAA 72 bp TGGAACAGAATGATTCACTGGGTAAGACTAAAGGACTaGTATTATCACTCTCCAATTCAGTTTCACATTGCT +
Preference number: 4 (lower is better)
Translates to: WNRMIHWVRLKD*YYHSPIQFHIA
Trigger: AGCAATGTGAAACTGAATTGGAGAGTGATAATACAAGTCCTTTAGTCTTACCCAGTGAATCATTCTGTTCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp AAACAGCCTGCAGCTTTGTTTCATGGTACATCACTGACAATGCATATTATTTCTTTGCATCCAGTGAGATaGATATTTCATGATTGTCCA +
Preference number: 4 (lower is better)
Translates to: KQPAALFHGTSLTMHIISLHPVR*IFHDCP
Trigger: TGGACAATCATGAAATATGCATCTCACTGGATGCAA...AGAAATAATATGCATTGTCAGTGATGTACCATGAAACAAAGCTGCAGGCTGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp TCTCACAAATGTTCTTCAAAGCCACAGGTATCAATCACTTCAACTAAAGTAAGGGAAAAAGAAATGACTTaGAGTCTAAAGCCTGGAGTA +
Preference number: 4 (lower is better)
Translates to: SHKCSSKPQVSITSTKVREKEMT*SLKPGV
Trigger: TACTCCAGGCTTTAGACTGCAAGTCATTTCTTTTTC...CCTTACTTTAGTTGAAGTGATTGATACCTGTGGCTTTGAAGAACATTTGTGAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR CCA 90 bp GGGTGCGTATCCAAAATATATGAATATACACAATCAGGGCTTAAGGTACTGGATCAGGGCTTAAGGTACTaGATGATATTGTATAAATTG +
Preference number: 4 (lower is better)
Translates to: GCVSKIYEYTQSGLKVLDQGLRY*MILYKL
Trigger: CAATTTATACAATATCATCCAGTACCTTAAGCCCTG...ATCCAGTACCTTAAGCCCTGATTGTGTATATTCATATATTTTGGATACGCACCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp AAACAGCCTGCAGCTTTGTTTCATGGTACATCACTGACAATGCATATTATTTCTAAGCTAGACATGTGTTaGGATTGCCCTGATTATTTA +
Preference number: 4 (lower is better)
Translates to: KQPAALFHGTSLTMHIISKLDMC*DCPDYL
Trigger: TAAATAATCAGGGCAATCCCAACACATGTCTAGCTT...AGAAATAATATGCATTGTCAGTGATGTACCATGAAACAAAGCTGCAGGCTGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp AATGCAATCCACTGTCACTCTTGCAAATTCTACCTTGGAGGGAAAAACTTAATGCTAATTTCCTTAGAATaGCTTGTATTTCGAGCCTTT +
Preference number: 4 (lower is better)
Translates to: NAIHCHSCKFYLGGKNLMLISLE*LVFRAF
Trigger: AAAGGCTCGAAATACAAGCCATTCTAAGGAAATTAG...CATTAAGTTTTTCCCTCCAAGGTAGAATTTGCAAGAGTGACAGTGGATTGCATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CCA 90 bp GGGTGCGTATCCAAAATATATGAATATACACAATCAGGGCTTAAGGTACTGGATAAAGGTTTAGGTGCATaGATTTACTCAGTATCTACA +
Preference number: 4 (lower is better)
Translates to: GCVSKIYEYTQSGLKVLDKGLGA*IYSVST
Trigger: TGTAGATACTGAGTAAATCCATGCACCTAAACCTTT...ATCCAGTACCTTAAGCCCTGATTGTGTATATTCATATATTTTGGATACGCACCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR GCA 90 bp TCTCACAAATGTTCTTCAAAGCCACAGGTATCAATCACTTCAACTAAAGTAAGGATAGAATACAAAGAATaGAGCCGATGCAAATTCTGT +
Preference number: 4 (lower is better)
Translates to: SHKCSSKPQVSITSTKVRIEYKE*SRCKFC
Trigger: ACAGAATTTGCATCGGCTGCATTCTTTGTATTCTAT...CCTTACTTTAGTTGAAGTGATTGATACCTGTGGCTTTGAAGAACATTTGTGAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR GCA 90 bp TTTCCAAAAGGTTTAGGTGCATGGATTTACTCAGTATCTACACTACAGTCTTATGACATGTGTTGGGATTaGCCTGATTATTTACATTTA +
Preference number: 4 (lower is better)
Translates to: FPKGLGAWIYSVSTLQSYDMCWD*PDYLHL
Trigger: TAAATGTAAATAATCAGGGCAATCCCAACACATGTC...ATAAGACTGTAGTGTAGATACTGAGTAAATCCATGCACCTAAACCTTTTGGAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS GCA 90 bp GCACCCCGCCTCCGGGCTGCGCACCCTTTCTCCTCCTCCTGGTCCTaGGCGGCGGCGCTGGCTACGGCCGCCTCCCGGAGCTCCCGCCGC +
Preference number: 5 (lower is better)
Translates to: APRLRAAHPFSSSWS*AAALATAASRSSRR
Trigger: GCGGCGGGAGCTCCGGGAGGCGGCCGTAGCCAGCGCCGCCGCGCAGGACCAGGAGGAGGAGAAAGGGTGCGCAGCCCGGAGGCGGGGTGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398117.1
CDS CCA 90 bp TGCAGCGGCGAGGTCCTGGCGACCGGGTCCCGGGATGCGGCTGGATaGGGCGTGTGCCCGGGCTGGGAGGAGAAGATGCCCGGTGCGGGG +
Preference number: 5 (lower is better)
Translates to: CSGEVLATGSRDAAG*GVCPGWEEKMPGAG
Trigger: CCCCGCACCGGGCATCTTCTCCTCCCAGCCCGGGCACACGCCCCATCCAGCCGCATCCCGGGACCCGGTCGCCAGGACCTCGCCGCTGCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000589955.2
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS GCA 90 bp AAAAGCTGCTGGATAAATGAAGGCAGGACGCGCCTGGCCCGCCGGTaGCGAGCGCTAGAAGCCCGCGCTGTGTGTGGTGCGGCGAGGGGT +
Preference number: 5 (lower is better)
Translates to: KSCWINEGRTRLARR*RALEARAVCGAARG
Trigger: ACCCCTCGCCGCACCACACACAGCGCGGGCTTCTAGCGCTCGGCACCGGCGGGCCAGGCGCGTCCTGCCTTCATTTATCCAGCAGCTTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333681.5
ENST00000398117.1
CDS TCA 90 bp CTTCTCGGCAATTTACACGCGCGCACACACGCGCGGGCACAGGCATaGATCTCTATCCACGGGACCGCTTCACGCCTCCCCAGGAGAGAG +
Preference number: 5 (lower is better)
Translates to: LLGNLHARTHARAQA*ISIHGTASRLPRRE
Trigger: CTCTCTCCTGGGGAGGCGTGAAGCGGTCCCGTGGATAGAGATTCATGCCTGTGCCCGCGCGTGTGTGCGCGCGTGTAAATTGCCGAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333681.5
ENST00000398117.1
CDS-3UTR CAA 90 bp TCACTTGTGGCCCAGATAGGCACCCAGGGTGATGCAAGCTCCCACCAGGGCCAAGGCGACATCTCCCGGTaGACGCTCTCCACACACATG +
Preference number: 5 (lower is better)
Translates to: SLVAQIGTQGDASSHQGQGDISR*TLSTHM
Trigger: CATGTGTGTGGAGAGCGTCAACCGGGAGATGTCGCC...TTGGCCCTGGTGGGAGCTTGCATCACCCTGGGTGCCTATCTGGGCCACAAGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CAA 90 bp ACTCTGATTTTATTTCGCCGGCTCCACAGCCTCCCATTGCCCCAGGAGCCCACCATCCACAGGGCGATGTaGTCCACCAGGGGCGACATC +
Preference number: 5 (lower is better)
Translates to: TLILFRRLHSLPLPQEPTIHRAM*STRGDI
Trigger: GATGTCGCCCCTGGTGGACAACATCGCCCTGTGGAT...GGTGGGCTCCTGGGGCAATGGGAGGCTGTGGAGCCGGCGAAATAAAATCAGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000589955.2
ENST00000678349.1
CDS-3UTR CAA 90 bp TCCTCACGTTCCCAGCCTTCACCATGTCCTTCTGATAGGAAGGGCCCAGGGCCTGACCACACTGCCCTGTaGATCATCCCTGGAGGAGGC +
Preference number: 5 (lower is better)
Translates to: SSRSQPSPCPSDRKGPGPDHTAL*IIPGGG
Trigger: GCCTCCTCCAGGGATGATCAACAGGGCAGTGTGGTC...AGGCCCTGGGCCCTTCCTATCAGAAGGACATGGTGAAGGCTGGGAACGTGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS CCA 90 bp GTACCCCAGAGGCTCGGGAGGCACCACTCGGTAGGAAGACCCTCCTaGTTTCTCAAGCTGGAGGAGCAGACTGAAAGGATGTTTGGGGAG +
Preference number: 5 (lower is better)
Translates to: VPQRLGRHHSVGRPS*FLKLEEQTERMFGE
Trigger: CTCCCCAAACATCCTTTCAGTCTGCTCCTCCAGCTTGAGAAACCAGGAGGGTCTTCCTACCGAGTGGTGCCTCCCGAGCCTCTGGGGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678301.1
CDS TCA 90 bp GTTCCACAAAGGCATCCTGGCCTGGAACCCTGGGATTCATTTGATTaGGGAGGGTCACAAGCTGTACCCCAGAGGCTCGGGAGGCACCAC +
Preference number: 5 (lower is better)
Translates to: VPQRHPGLEPWDSFD*GGSQAVPQRLGRHH
Trigger: GTGGTGCCTCCCGAGCCTCTGGGGTACAGCTTGTGACCCTCCTCAATCAAATGAATCCCAGGGTTCCAGGCCAGGATGCCTTTGTGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678301.1
CDS GCA 90 bp TACTTCATCACTATCTCCCGGTTATCGTACCCTGTTCTCCCAGCGTaGGCCATCCTTCCCAGAGGAAAAGCAACGGGGGCCAACGGCACC +
Preference number: 5 (lower is better)
Translates to: YFITISRLSYPVLPA*AILPRGKATGANGT
Trigger: GGTGCCGTTGGCCCCCGTTGCTTTTCCTCTGGGAAGGATGGCGCACGCTGGGAGAACAGGGTACGATAACCGGGAGATAGTGATGAAGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000589955.2
CDS CCA 90 bp CCCAGACTCACATCACCAAGTGCACCTACCCAGCCTCCGTTATCCTaGATCCAGGTGTGCAGGTGCCGGTTCAGGTACTCAGTCATCCAC +
Preference number: 5 (lower is better)
Translates to: PRLTSPSAPTQPPLS*IQVCRCRFRYSVIH
Trigger: GTGGATGACTGAGTACCTGAACCGGCACCTGCACACCTGGATCCAGGATAACGGAGGCTGGGTAGGTGCACTTGGTGATGTGAGTCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589955.2
ENST00000678349.1
CDS-3UTR CAA 90 bp GGGACTGGGAGGGCCGAGGAGGTTCTCAGATGTTCTTCTCCTTTTGGGGCTTTTAATGGGCCGTGGCCATaGCCTCTCCTCACGTTCCCA +
Preference number: 5 (lower is better)
Translates to: GTGRAEEVLRCSSPFGAFNGPWP*PLLTFP
Trigger: TGGGAACGTGAGGAGAGGCAATGGCCACGGCCCATT...AAAAGCCCCAAAAGGAGAAGAACATCTGAGAACCTCCTCGGCCCTCCCAGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS TCA 90 bp AAACTCCGAACAGCAAATGCATTTTCCGAAAAGCTGCTGGATAAATaGAGGCAGGACGCGCCTGGCCCGCCGGTGCCGAGCGCTAGAAGC +
Preference number: 5 (lower is better)
Translates to: KLRTANAFSEKLLDK*RQDAPGPPVPSARS
Trigger: GCTTCTAGCGCTCGGCACCGGCGGGCCAGGCGCGTCCTGCCTTCATTTATCCAGCAGCTTTTCGGAAAATGCATTTGCTGTTCGGAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333681.5
ENST00000398117.1
CDS TCA 90 bp TACAGTTCCACAAAGGCATCCTGGCCTGGAACCCTGGGATTCATTTaGTTGAGGAGGGTCACAAGCTGTACCCCAGAGGCTCGGGAGGCA +
Preference number: 5 (lower is better)
Translates to: YSSTKASWPGTLGFI*LRRVTSCTPEAREA
Trigger: TGCCTCCCGAGCCTCTGGGGTACAGCTTGTGACCCTCCTCAATCAAATGAATCCCAGGGTTCCAGGCCAGGATGCCTTTGTGGAACTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678301.1
CDS TCA 90 bp AAGGCTGCAGGCGTGGGGGAACAGGCATTACTGTTGAACAGATCCTaGGTTTCTGTCCAGCCTCCGTTATCCTGGATCCAGGTGTGCAGG +
Preference number: 5 (lower is better)
Translates to: KAAGVGEQALLLNRS*VSVQPPLSWIQVCR
Trigger: CCTGCACACCTGGATCCAGGATAACGGAGGCTGGACAGAAACTCAGGATCTGTTCAACAGTAATGCCTGTTCCCCCACGCCTGCAGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677227.1
CDS TCA 90 bp TGGTGGTTGCCAAGGCTGCAGGCGTGGGGGAACAGGCATTACTGTTaGACAGATCCTGAGTTTCTGTCCAGCCTCCGTTATCCTGGATCC +
Preference number: 5 (lower is better)
Translates to: WWLPRLQAWGNRHYC*TDPEFLSSLRYPGS
Trigger: GGATCCAGGATAACGGAGGCTGGACAGAAACTCAGGATCTGTTCAACAGTAATGCCTGTTCCCCCACGCCTGCAGCCTTGGCAACCACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677227.1
CDS-3UTR CAA 90 bp ATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGGTGCTTGATCCACAGGGCGATGTaGTCCACCAGGGGCGACATC +
Preference number: 5 (lower is better)
Translates to: IYVYRHRTSRWSHTKRCLIHRAM*STRGDI
Trigger: GATGTCGCCCCTGGTGGACAACATCGCCCTGTGGAT...CAAGCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CAA 90 bp TTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGGTGCTTGGCAATTAATCCACAGGGCGATGTaGTCCACCAGGGGCGACATC +
Preference number: 5 (lower is better)
Translates to: FTGTEHPGGATRSGAWQLIHRAM*STRGDI
Trigger: GATGTCGCCCCTGGTGGACAACATCGCCCTGTGGAT...TAATTGCCAAGCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CAA 90 bp TGCAGCGAGGGACTGGGAGGGCCGAGGAGGTTCTCAGATGTTCTTCTCCTTTTGTCATTCTGGCCTCTCTaGCGGAGTATTTGTGCAGCG +
Preference number: 5 (lower is better)
Translates to: CSEGLGGPRRFSDVLLLLSFWPL*RSICAA
Trigger: CGCTGCACAAATACTCCGCAAGAGAGGCCAGAATGA...CAAAAGGAGAAGAACATCTGAGAACCTCCTCGGCCCTCCCAGTCCCTCGCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp ACTCTGATTTTATTTCGCCGGCTCCACAGCCTCCCATTGCCCCAGGAGCCCACCTTCAGGGGAGCTTGTTaGGGATGCAGACTGTCAAGA +
Preference number: 5 (lower is better)
Translates to: TLILFRRLHSLPLPQEPTFRGAC*GCRLSR
Trigger: TCTTGACAGTCTGCATCCCAAACAAGCTCCCCTGAA...GGTGGGCTCCTGGGGCAATGGGAGGCTGTGGAGCCGGCGAAATAAAATCAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000589955.2
ENST00000678349.1
CDS TCA 90 bp CCTTATCATCGGCTCGGCAGGATTTCCTCCACAGCCACATTGTGCTaGATGAGTCTAGAGGGTTCCGTCTGCAGAGCAGTGTGGCTTTGG +
Preference number: 5 (lower is better)
Translates to: PYHRLGRISSTATLC*MSLEGSVCRAVWLW
Trigger: CCAAAGCCACACTGCTCTGCAGACGGAACCCTCTAGACTCATTCAGCACAATGTGGCTGTGGAGGAAATCCTGCCGAGCCGATGATAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677635.1
CDS-3UTR CAA 90 bp CATCCGTCTGCTCTTCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTAGGCGACATCTCCCGGTaGACGCTCTCCACACACATG +
Preference number: 5 (lower is better)
Translates to: HPSALQMVIRPTTWKANLGDISR*TLSTHM
Trigger: CATGTGTGTGGAGAGCGTCAACCGGGAGATGTCGCC...TAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGAAGAGCAGACGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CAA 90 bp GAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGGCGACATCTCCCGGTaGACGCTCTCCACACACATG +
Preference number: 5 (lower is better)
Translates to: ESESMFTGTEHPGGATRSGDISR*TLSTHM
Trigger: CATGTGTGTGGAGAGCGTCAACCGGGAGATGTCGCC...GCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CAA 90 bp ATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGGTGCTTGGCAATTTGGGGCAGGCATGTaGACTTCACTTGTGGCCCAG +
Preference number: 5 (lower is better)
Translates to: MFTGTEHPGGATRSGAWQFGAGM*TSLVAQ
Trigger: CTGGGCCACAAGTGAAGTCAACATGCCTGCCCCAAA...TTGCCAAGCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp ACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGGTGCTTGGCAATTAGTGCACACGAAGCGGTGCTaGGCAATTAGTGGTCGGATT +
Preference number: 5 (lower is better)
Translates to: TGTEHPGGATRSGAWQLVHTKRC*AISGRI
Trigger: AATCCGACCACTAATTGCCAAGCACCGCTTCGTGTG...CACTAATTGCCAAGCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp CTGCCAAATCTTCGGAGACGACCCGATGGCCATAGACCCTGTCAGCTGTCATTCCACACGAAGCGGTGCTaGGCAATTAGTGGTCGGATT +
Preference number: 5 (lower is better)
Translates to: LPNLRRRPDGHRPCQLSFHTKRC*AISGRI
Trigger: AATCCGACCACTAATTGCCAAGCACCGCTTCGTGTG...GAATGACAGCTGACAGGGTCTATGGCCATCGGGTCGTCTCCGAAGATTTGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp CTCTGGGTAACTCTAGCCTTCCTGATGCGGAAGTCACCGAAATGTTCACTTCCTGACCACACTGCCCTGTaGATCATCCCTGGAGGAGGC +
Preference number: 5 (lower is better)
Translates to: LWVTLAFLMRKSPKCSLPDHTAL*IIPGGG
Trigger: GCCTCCTCCAGGGATGATCAACAGGGCAGTGTGGTC...AGGAAGTGAACATTTCGGTGACTTCCGCATCAGGAAGGCTAGAGTTACCCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp CCCGCCGGGGAGGTCTGGCTTCATACCACAGGTTTCCTGCTTTCTTGGTGGAGCATGCACATGACTTGGTaGAAACAAAGCTCCTCAGTG +
Preference number: 5 (lower is better)
Translates to: PAGEVWLHTTGFLLSWWSMHMTW*KQSSSV
Trigger: CACTGAGGAGCTTTGTTTCAACCAAGTCATGTGCAT...GCTCCACCAAGAAAGCAGGAAACCTGTGGTATGAAGCCAGACCTCCCCGGCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp GGCCATAGACCCTGTCAGCTGTCATTCTGGCCTCTCTTGCGGAGTATTTGTGCATCTCTTGCGGAGTATTaGTGCAGCGAGGGACTGGGA +
Preference number: 5 (lower is better)
Translates to: GHRPCQLSFWPLLRSICASLAEY*CSEGLG
Trigger: TCCCAGTCCCTCGCTGCACAAATACTCCGCAAGAGA...TGCACAAATACTCCGCAAGAGAGGCCAGAATGACAGCTGACAGGGTCTATGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp ACAGCCAAAATGGGCCGTGGCCATTGCCTCTCCTCACGTTCCCAGCCTTCACCATCTTCTGTGCTCAGCTaGGTATGCAGAACAACCTTG +
Preference number: 5 (lower is better)
Translates to: TAKMGRGHCLSSRSQPSPSSVLS*VCRTTL
Trigger: CAAGGTTGTTCTGCATACCAAGCTGAGCACAGAAGA...TGGTGAAGGCTGGGAACGTGAGGAGAGGCAATGGCCACGGCCCATTTTGGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp AATGGGCCGTGGCCATTGCCTCTCCTCACGTTCCCAGCCTTCACCATGTCCTTCCGATTGATGATGCCCTaGGTCTTCTGTGGAGTCTAT +
Preference number: 5 (lower is better)
Translates to: NGPWPLPLLTFPAFTMSFRLMMP*VFCGVY
Trigger: ATAGACTCCACAGAAGACCAAGGGCATCATCAATCG...GAAGGACATGGTGAAGGCTGGGAACGTGAGGAGAGGCAATGGCCACGGCCCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678349.1
CDS-3UTR CAA 90 bp ATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAGGCGACATCTCCCGGTaGACGCTCTCCACACACATG +
Preference number: 5 (lower is better)
Translates to: MESESMFTGTEHPGGATRGDISR*TLSTHM
Trigger: CATGTGTGTGGAGAGCGTCAACCGGGAGATGTCGCC...TCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CAA 90 bp GGTGCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGATGGGACTGATCCACAGGGCGATGTaGTCCACCAGGGGCGACATC +
Preference number: 5 (lower is better)
Translates to: GAWQLVVGFPKTGVLMGLIHRAM*STRGDI
Trigger: GATGTCGCCCCTGGTGGACAACATCGCCCTGTGGAT...CAGTCCCATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CAA 90 bp GAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGGTGCTTTTGGGGCAGGCATGTaGACTTCACTTGTGGCCCAG +
Preference number: 5 (lower is better)
Translates to: ESMFTGTEHPGGATRSGAFGAGM*TSLVAQ
Trigger: CTGGGCCACAAGTGAAGTCAACATGCCTGCCCCAAA...AGCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp TCCTCACGTTCCCAGCCTTCACCATGTCCTTCTGATAGGAAGGGCCCAGGGCCTATGCACATGACTTGGTaGAAACAAAGCTCCTCAGTG +
Preference number: 5 (lower is better)
Translates to: SSRSQPSPCPSDRKGPGPMHMTW*KQSSSV
Trigger: CACTGAGGAGCTTTGTTTCAACCAAGTCATGTGCAT...AGGCCCTGGGCCCTTCCTATCAGAAGGACATGGTGAAGGCTGGGAACGTGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp CCCAGGGCCTCTGTTCCTTCCCTCTACAGTGATACATGTCTTAAGAAGGGTCGTTCTCTTGCGGAGTATTaGTGCAGCGAGGGACTGGGA +
Preference number: 5 (lower is better)
Translates to: PRASVPSLYSDTCLKKGRSLAEY*CSEGLG
Trigger: TCCCAGTCCCTCGCTGCACAAATACTCCGCAAGAGA...ACGACCCTTCTTAAGACATGTATCACTGTAGAGGGAAGGAACAGAGGCCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp GCCACACAGCCAACGTGCCATGTGCTACAGCCAAAATGGGCCGTGGCCATTGCCTTGAAATTTATACCATaGCACTGCCAAACGGAGCTG +
Preference number: 5 (lower is better)
Translates to: ATQPTCHVLQPKWAVAIALKFIP*HCQTEL
Trigger: CAGCTCCGTTTGGCAGTGCAATGGTATAAATTTCAA...GGCAATGGCCACGGCCCATTTTGGCTGTAGCACATGGCACGTTGGCTGTGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp ACTCTGATTTTATTTCGCCGGCTCCACAGCCTCCCATTGCCCCAGGAGCCCACCCATGTGGTGTGCTTCTaGACATCTAATCCACTTGCA +
Preference number: 5 (lower is better)
Translates to: TLILFRRLHSLPLPQEPTHVVCF*TSNPLA
Trigger: TGCAAGTGGATTAGATGTCAAGAAGCACACCACATG...GGTGGGCTCCTGGGGCAATGGGAGGCTGTGGAGCCGGCGAAATAAAATCAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR CAA 90 bp GGAACATGGCACACACTGGAGATTCCAGTCCAAGGACTTTGGAATGTCAACTTAATCCACAGGGCGATGTaGTCCACCAGGGGCGACATC +
Preference number: 5 (lower is better)
Translates to: GTWHTLEIPVQGLWNVNLIHRAM*STRGDI
Trigger: GATGTCGCCCCTGGTGGACAACATCGCCCTGTGGAT...TAAGTTGACATTCCAAAGTCCTTGGACTGGAATCTCCAGTGTGTGCCATGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR CAA 90 bp CCGTCTGCTCTTCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTTGGGGCAGGCATGTaGACTTCACTTGTGGCCCAG +
Preference number: 5 (lower is better)
Translates to: PSALQMVIRPTTWKANLCFGAGM*TSLVAQ
Trigger: CTGGGCCACAAGTGAAGTCAACATGCCTGCCCCAAA...ACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGAAGAGCAGACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp GTCAGCTGTCATTCTGGCCTCTCTTGCGGAGTATTTGTGCAGCGAGGGACTGGGGAACCTTTTGCATATTaGTTTGGGGCAGGCATGTTG +
Preference number: 5 (lower is better)
Translates to: VSCHSGLSCGVFVQRGTGEPFAY*FGAGML
Trigger: CAACATGCCTGCCCCAAACAAATATGCAAAAGGTTC...CCCAGTCCCTCGCTGCACAAATACTCCGCAAGAGAGGCCAGAATGACAGCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp GCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGATGGGACTGTCTAATGGGCCGTGGCCATaGCCTCTCCTCACGTTCCCA +
Preference number: 5 (lower is better)
Translates to: AWQLVVGFPKTGVLMGLSNGPWP*PLLTFP
Trigger: TGGGAACGTGAGGAGAGGCAATGGCCACGGCCCATT...AGACAGTCCCATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp TCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAAATGGGCCGTGGCCATaGCCTCTCCTCACGTTCCCA +
Preference number: 5 (lower is better)
Translates to: SDGDPANNMESESMFTGTNGPWP*PLLTFP
Trigger: TGGGAACGTGAGGAGAGGCAATGGCCACGGCCCATT...TGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp GGCCATAGACCCTGTCAGCTGTCATTCTGGCCTCTCTTGCGGAGTATTTGTGCAGAATTAAATGCGGAATaGCCCAGGGACGAGGAAACC +
Preference number: 5 (lower is better)
Translates to: GHRPCQLSFWPLLRSICAELNAE*PRDEET
Trigger: GGTTTCCTCGTCCCTGGGCAATTCCGCATTTAATTC...TGCACAAATACTCCGCAAGAGAGGCCAGAATGACAGCTGACAGGGTCTATGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp TCCTCACGTTCCCAGCCTTCACCATGTCCTTCTGATAGGAAGGGCCCAGGGCCTCAAACCACCATAGATTaGAATCTGCTGGTCATTTGC +
Preference number: 5 (lower is better)
Translates to: SSRSQPSPCPSDRKGPGPQTTID*NLLVIC
Trigger: GCAAATGACCAGCAGATTCAAATCTATGGTGGTTTG...AGGCCCTGGGCCCTTCCTATCAGAAGGACATGGTGAAGGCTGGGAACGTGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp TGGGTACTAGGTCCATCTGAAGTTCCCAACTCTTTTCCTCCCACCAGGTATGCATCTCTTGCGGAGTATTaGTGCAGCGAGGGACTGGGA +
Preference number: 5 (lower is better)
Translates to: WVLGPSEVPNSFPPTRYASLAEY*CSEGLG
Trigger: TCCCAGTCCCTCGCTGCACAAATACTCCGCAAGAGA...TGCATACCTGGTGGGAGGAAAAGAGTTGGGAACTTCAGATGGACCTAGTACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp GTCTGGCTTCATACCACAGGTTTCCTGCTTTCTTGGTGGAGCGTAAGCACCACTTCATTCTGGCCTCTCTaGCGGAGTATTTGTGCAGCG +
Preference number: 5 (lower is better)
Translates to: VWLHTTGFLLSWWSVSTTSFWPL*RSICAA
Trigger: CGCTGCACAAATACTCCGCAAGAGAGGCCAGAATGA...AGTGGTGCTTACGCTCCACCAAGAAAGCAGGAAACCTGTGGTATGAAGCCAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp AAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGGTCATTCTGGCCTCTCTaGCGGAGTATTTGTGCAGCG +
Preference number: 5 (lower is better)
Translates to: KRIYVYRHRTSRWSHTKRSFWPL*RSICAA
Trigger: CGCTGCACAAATACTCCGCAAGAGAGGCCAGAATGA...CCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp AGAACATCCAGGTGGAGCCACACGAAGCGGTGCTTGGCAATTAGTGGTCGGATTAAACGGAGCTGCACTTaGAGCCATGCTGATGTCTCT +
Preference number: 5 (lower is better)
Translates to: RTSRWSHTKRCLAISGRIKRSCT*SHADVS
Trigger: AGAGACATCAGCATGGCTCAAAGTGCAGCTCCGTTT...AATCCGACCACTAATTGCCAAGCACCGCTTCGTGTGGCTCCACCTGGATGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp TCTTCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCGCAGTAGTATGGTGGTaGCCAAGGCTGCAGGCGTGG +
Preference number: 5 (lower is better)
Translates to: SSDGDPANNMESESMFTGAVVWW*PRLQAW
Trigger: CCACGCCTGCAGCCTTGGCAACCACCATACTACTGC...GCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677227.1
CDS-3UTR CAA 90 bp GAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCCACACGAAGCGGTGCTaGGCAATTAGTGGTCGGATT +
Preference number: 5 (lower is better)
Translates to: ESESMFTGTEHPGGATRSHTKRC*AISGRI
Trigger: AATCCGACCACTAATTGCCAAGCACCGCTTCGTGTG...GCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp AGCTTGGAGGATCTTACCACGTGGAGCATACTGCAAACTGACTCCATTAAAATGGACCACACTGCCCTGTaGATCATCCCTGGAGGAGGC +
Preference number: 5 (lower is better)
Translates to: SLEDLTTWSILQTDSIKMDHTAL*IIPGGG
Trigger: GCCTCCTCCAGGGATGATCAACAGGGCAGTGTGGTC...CATTTTAATGGAGTCAGTTTGCAGTATGCTCCACGTGGTAAGATCCTCCAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp AAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGGGAATTAAATGCGGAATaGCCCAGGGACGAGGAAACC +
Preference number: 5 (lower is better)
Translates to: KRIYVYRHRTSRWSHTKRELNAE*PRDEET
Trigger: GGTTTCCTCGTCCCTGGGCAATTCCGCATTTAATTC...CCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp TCCTCACGTTCCCAGCCTTCACCATGTCCTTCTGATAGGAAGGGCCCAGGGCCTGAATCTGCTGGTCATTaGCCATCTGGATTTTTAACT +
Preference number: 5 (lower is better)
Translates to: SSRSQPSPCPSDRKGPGPESAGH*PSGFLT
Trigger: AGTTAAAAATCCAGATGGCAAATGACCAGCAGATTC...AGGCCCTGGGCCCTTCCTATCAGAAGGACATGGTGAAGGCTGGGAACGTGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp AAAGGTCTGATCATTCTGTTCCCTGAGGCCCGCCGGGGAGGTCTGGCTTCATACAGGGATGGTTCTCTGTaGCCCAACTGCAAAATAATT +
Preference number: 5 (lower is better)
Translates to: KGLIILFPEARRGGLASYRDGSL*PNCKII
Trigger: AATTATTTTGCAGTTGGGCAACAGAGAACCATCCCT...GTATGAAGCCAGACCTCCCCGGCGGGCCTCAGGGAACAGAATGATCAGACCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp AGCGGTGCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGATGGGATCTCTTGCGGAGTATTaGTGCAGCGAGGGACTGGGA +
Preference number: 5 (lower is better)
Translates to: SGAWQLVVGFPKTGVLMGSLAEY*CSEGLG
Trigger: TCCCAGTCCCTCGCTGCACAAATACTCCGCAAGAGA...TCCCATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp CTGCCAAATCTTCGGAGACGACCCGATGGCCATAGACCCTGTCAGCTGTCATTCAATCCACTGTCACTCTaGCAAATTCTACCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: LPNLRRRPDGHRPCQLSFNPLSL*QILPWR
Trigger: CCTCCAAGGTAGAATTTGCAAGAGTGACAGTGGATT...GAATGACAGCTGACAGGGTCTATGGCCATCGGGTCGTCTCCGAAGATTTGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp CACAGTTCCCAGTTTAGAGGGTCACTCTCCATCACCTGCCCAAAACTCAATCCCTTGTTTCAGGGGAGCTaGTTTGGGATGCAGACTGTC +
Preference number: 5 (lower is better)
Translates to: HSSQFRGSLSITCPKLNPLFQGS*FGMQTV
Trigger: GACAGTCTGCATCCCAAACAAGCTCCCCTGAAACAA...GGGATTGAGTTTTGGGCAGGTGATGGAGAGTGACCCTCTAAACTGGGAACTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR CAA 90 bp TGGGTACTAGGTCCATCTGAAGTTCCCAACTCTTTTCCTCCCACCAGGTATGCAAATCACGCGGAACACTaGATTCTGGTGTTTCCCCCT +
Preference number: 5 (lower is better)
Translates to: WVLGPSEVPNSFPPTRYANHAEH*ILVFPP
Trigger: AGGGGGAAACACCAGAATCAAGTGTTCCGCGTGATT...TGCATACCTGGTGGGAGGAAAAGAGTTGGGAACTTCAGATGGACCTAGTACCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333681.5
ENST00000398117.1
CDS-3UTR CAA 90 bp CCCAGGGACGAGGAAACCTTCAAGAAACAAGGTCAAAGGGACAACAGATATAACTTTGGGGCAGGCATGTaGACTTCACTTGTGGCCCAG +
Preference number: 5 (lower is better)
Translates to: PRDEETFKKQGQRDNRYNFGAGM*TSLVAQ
Trigger: CTGGGCCACAAGTGAAGTCAACATGCCTGCCCCAAA...GTTATATCTGTTGTCCCTTTGACCTTGTTTCTTGAAGGTTTCCTCGTCCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp CCCACAGGAACCCTCCCTCTGTTAATATCACAGCCCCCAGGGCAAAGAAATGCAGAACCTTTTGCATATTaGTTTGGGGCAGGCATGTTG +
Preference number: 5 (lower is better)
Translates to: PTGTLPLLISQPPGQRNAEPFAY*FGAGML
Trigger: CAACATGCCTGCCCCAAACAAATATGCAAAAGGTTC...TGCATTTCTTTGCCCTGGGGGCTGTGATATTAACAGAGGGAGGGTTCCTGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp TGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGGTGCTTGGCAATAAACAGCCTGCAGCTTaGTTTCATGGTACATCACTG +
Preference number: 5 (lower is better)
Translates to: CLQAQNIQVEPHEAVLGNKQPAA*FHGTSL
Trigger: CAGTGATGTACCATGAAACAAAGCTGCAGGCTGTTT...ATTGCCAAGCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp GGCCATAGACCCTGTCAGCTGTCATTCTGGCCTCTCTTGCGGAGTATTTGTGCAAAACAGCCTGCAGCTTaGTTTCATGGTACATCACTG +
Preference number: 5 (lower is better)
Translates to: GHRPCQLSFWPLLRSICAKQPAA*FHGTSL
Trigger: CAGTGATGTACCATGAAACAAAGCTGCAGGCTGTTT...TGCACAAATACTCCGCAAGAGAGGCCAGAATGACAGCTGACAGGGTCTATGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp TGGGTACTAGGTCCATCTGAAGTTCCCAACTCTTTTCCTCCCACCAGGTATGCAGAATTAAATGCGGAATaGCCCAGGGACGAGGAAACC +
Preference number: 5 (lower is better)
Translates to: WVLGPSEVPNSFPPTRYAELNAE*PRDEET
Trigger: GGTTTCCTCGTCCCTGGGCAATTCCGCATTTAATTC...TGCATACCTGGTGGGAGGAAAAGAGTTGGGAACTTCAGATGGACCTAGTACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp GTCAGCTGTCATTCTGGCCTCTCTTGCGGAGTATTTGTGCAGCGAGGGACTGGGCTCTGTGAATCCCGTTaGAACAACAACAAAAGACAA +
Preference number: 5 (lower is better)
Translates to: VSCHSGLSCGVFVQRGTGLCESR*NNNKRQ
Trigger: TTGTCTTTTGTTGTTGTTCAAACGGGATTCACAGAG...CCCAGTCCCTCGCTGCACAAATACTCCGCAAGAGAGGCCAGAATGACAGCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp AAGGTTCTTCGCAGAGGCATCACATCGACCCCAATACAGGTCCTTCATACCCTTAAACGGAGCTGCACTTaGAGCCATGCTGATGTCTCT +
Preference number: 5 (lower is better)
Translates to: KVLRRGITSTPIQVLHTLKRSCT*SHADVS
Trigger: AGAGACATCAGCATGGCTCAAAGTGCAGCTCCGTTT...AAGGGTATGAAGGACCTGTATTGGGGTCGATGTGATGCCTCTGCGAAGAACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp CATCCGTCTGCTCTTCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTAAAACGGAGCTGCACTTaGAGCCATGCTGATGTCTCT +
Preference number: 5 (lower is better)
Translates to: HPSALQMVIRPTTWKANLKRSCT*SHADVS
Trigger: AGAGACATCAGCATGGCTCAAAGTGCAGCTCCGTTT...TAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGAAGAGCAGACGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp TTTAAGGGCATTTTTCCCATCGCTGTCCTTCGGCGTGGAAATCTCAGTGGGTACAAACGGAGCTGCACTTaGAGCCATGCTGATGTCTCT +
Preference number: 5 (lower is better)
Translates to: FKGIFPIAVLRRGNLSGYKRSCT*SHADVS
Trigger: AGAGACATCAGCATGGCTCAAAGTGCAGCTCCGTTT...GTACCCACTGAGATTTCCACGCCGAAGGACAGCGATGGGAAAAATGCCCTTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp GAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCAAACGGAGCTGCACTTaGAGCCATGCTGATGTCTCT +
Preference number: 5 (lower is better)
Translates to: ESESMFTGTEHPGGATRSKRSCT*SHADVS
Trigger: AGAGACATCAGCATGGCTCAAAGTGCAGCTCCGTTT...GCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp CCCACAGGAACCCTCCCTCTGTTAATATCACAGCCCCCAGGGCAAAGAAATGCAAATCCACTGTCACTCTaGCAAATTCTACCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: PTGTLPLLISQPPGQRNANPLSL*QILPWR
Trigger: CCTCCAAGGTAGAATTTGCAAGAGTGACAGTGGATT...TGCATTTCTTTGCCCTGGGGGCTGTGATATTAACAGAGGGAGGGTTCCTGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp TTGCCCAGGGACGAGGAAACCTTCAAGAAACAAGGTCAAAGGGACAACAGATATTTGGGAGTGAACGCTTaGTCCAGAGGAGGAGGTAGG +
Preference number: 5 (lower is better)
Translates to: LPRDEETFKKQGQRDNRYLGVNA*SRGGGR
Trigger: CCTACCTCCTCCTCTGGACAAAGCGTTCACTCCCAA...ATATCTGTTGTCCCTTTGACCTTGTTTCTTGAAGGTTTCCTCGTCCCTGGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678349.1
CDS-3UTR CAA 90 bp GCCACACGAAGCGGTGCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTAACCCTGGGATTCATTaGATTGAGGAGGGTCACAAG +
Preference number: 5 (lower is better)
Translates to: ATRSGAWQLVVGFPKTGVNPGIH*IEEGHK
Trigger: CTTGTGACCCTCCTCAATCAAATGAATCCCAGGGTT...AACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACCGCTTCGTGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678301.1
CDS-3UTR CAA 90 bp ATAGCTGATTCGACGTTTTGCCTGAAGACTGTTAATTGTTGTGTGTGTGTGTGTATCCACAGGGCGATGTaGTCCACCAGGGGCGACATC +
Preference number: 5 (lower is better)
Translates to: IADSTFCLKTVNCCVCVCIHRAM*STRGDI
Trigger: GATGTCGCCCCTGGTGGACAACATCGCCCTGTGGAT...ACACACACACACACAACAATTAACAGTCTTCAGGCAAAACGTCGAATCAGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CAA 90 bp TTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGGTGCTTGGCAATTAGAACCTTTTGCATATTaGTTTGGGGCAGGCATGTTG +
Preference number: 5 (lower is better)
Translates to: FTGTEHPGGATRSGAWQLEPFAY*FGAGML
Trigger: CAACATGCCTGCCCCAAACAAATATGCAAAAGGTTC...TAATTGCCAAGCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp GCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGATGGGACTGTCTTAAATGACCACACTGCCCTGTaGATCATCCCTGGAGGAGGC +
Preference number: 5 (lower is better)
Translates to: AISGRISKDRSFDGTVLNDHTAL*IIPGGG
Trigger: GCCTCCTCCAGGGATGATCAACAGGGCAGTGTGGTC...ATTTAAGACAGTCCCATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp AAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGGATGCACATGACTTGGTaGAAACAAAGCTCCTCAGTG +
Preference number: 5 (lower is better)
Translates to: KRIYVYRHRTSRWSHTKRMHMTW*KQSSSV
Trigger: CACTGAGGAGCTTTGTTTCAACCAAGTCATGTGCAT...CCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp TTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGGTGCTTGGCAATTAGGAAATGCACATGACTaGGTTGAAACAAAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: FTGTEHPGGATRSGAWQLGNAHD*VETKLL
Trigger: GAGGAGCTTTGTTTCAACCAAGTCATGTGCATTTCC...TAATTGCCAAGCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp ATGCATCATGTGAGTCATATGCAAAGAGTCTCTTCTTCAGGCCAGGGAGGCATGGAATTAAATGCGGAATaGCCCAGGGACGAGGAAACC +
Preference number: 5 (lower is better)
Translates to: MHHVSHMQRVSSSGQGGMELNAE*PRDEET
Trigger: GGTTTCCTCGTCCCTGGGCAATTCCGCATTTAATTC...CATGCCTCCCTGGCCTGAAGAAGAGACTCTTTGCATATGACTCACATGATGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp GGGACTGGGAGGGCCGAGGAGGTTCTCAGATGTTCTTCTCCTTTTGGGGCTTTTGAATCTGCTGGTCATTaGCCATCTGGATTTTTAACT +
Preference number: 5 (lower is better)
Translates to: GTGRAEEVLRCSSPFGAFESAGH*PSGFLT
Trigger: AGTTAAAAATCCAGATGGCAAATGACCAGCAGATTC...AAAAGCCCCAAAAGGAGAAGAACATCTGAGAACCTCCTCGGCCCTCCCAGTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp AGAACATCCAGGTGGAGCCACACGAAGCGGTGCTTGGCAATTAGTGGTCGGATTAGGGATGGTTCTCTGTaGCCCAACTGCAAAATAATT +
Preference number: 5 (lower is better)
Translates to: RTSRWSHTKRCLAISGRIRDGSL*PNCKII
Trigger: AATTATTTTGCAGTTGGGCAACAGAGAACCATCCCT...AATCCGACCACTAATTGCCAAGCACCGCTTCGTGTGGCTCCACCTGGATGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp CCCAGGGCCTCTGTTCCTTCCCTCTACAGTGATACATGTCTTAAGAAGGGTCGTGCCCTTGTCCCCAATTaGGAAAGTGCATATACTCTA +
Preference number: 5 (lower is better)
Translates to: PRASVPSLYSDTCLKKGRALVPN*ESAYTL
Trigger: TAGAGTATATGCACTTTCCAAATTGGGGACAAGGGC...ACGACCCTTCTTAAGACATGTATCACTGTAGAGGGAAGGAACAGAGGCCCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp CTGCCAAATCTTCGGAGACGACCCGATGGCCATAGACCCTGTCAGCTGTCATTCGTATGCAGAACAACCTaGTTGTTGATAGGATGTTTG +
Preference number: 5 (lower is better)
Translates to: LPNLRRRPDGHRPCQLSFVCRTT*LLIGCL
Trigger: CAAACATCCTATCAACAACAAGGTTGTTCTGCATAC...GAATGACAGCTGACAGGGTCTATGGCCATCGGGTCGTCTCCGAAGATTTGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp CATCCGTCTGCTCTTCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATCTTCTGTGCTCAGCTaGGTATGCAGAACAACCTTG +
Preference number: 5 (lower is better)
Translates to: HPSALQMVIRPTTWKANLSSVLS*VCRTTL
Trigger: CAAGGTTGTTCTGCATACCAAGCTGAGCACAGAAGA...TAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGAAGAGCAGACGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp CCACCAGTGTTCCCATCTTCTGTGCTCAGCTTGGTATGCAGAACAACCTTGTTGTCTTCTGTGCTCAGCTaGGTATGCAGAACAACCTTG +
Preference number: 5 (lower is better)
Translates to: PPVFPSSVLSLVCRTTLLSSVLS*VCRTTL
Trigger: CAAGGTTGTTCTGCATACCAAGCTGAGCACAGAAGA...CAACAAGGTTGTTCTGCATACCAAGCTGAGCACAGAAGATGGGAACACTGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp GAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGGTGCTAATCCACTGTCACTCTaGCAAATTCTACCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: ESMFTGTEHPGGATRSGANPLSL*QILPWR
Trigger: CCTCCAAGGTAGAATTTGCAAGAGTGACAGTGGATT...AGCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp TCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTCCTGGACCTTCAGCTaGAGAAACACTGAAGGGGTA +
Preference number: 5 (lower is better)
Translates to: SGQQHGKRIYVYRHRTSRSWTFS*RNTEGV
Trigger: TACCCCTTCAGTGTTTCTCAAGCTGAAGGTCCAGGA...CCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678349.1
CDS-3UTR CAA 90 bp CGAAGCGGTGCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGATGTTGTTTCAGGGGAGCTaGTTTGGGATGCAGACTGTC +
Preference number: 5 (lower is better)
Translates to: RSGAWQLVVGFPKTGVLMLFQGS*FGMQTV
Trigger: GACAGTCTGCATCCCAAACAAGCTCCCCTGAAACAA...CATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACCGCTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678349.1
CDS-3UTR CAA 90 bp GGCCATAGACCCTGTCAGCTGTCATTCTGGCCTCTCTTGCGGAGTATTTGTGCAGGCACTCCGAGCTTCTaGGAGAACATTATGAATAAT +
Preference number: 5 (lower is better)
Translates to: GHRPCQLSFWPLLRSICAGTPSF*ENIMNN
Trigger: ATTATTCATAATGTTCTCCAAGAAGCTCGGAGTGCC...TGCACAAATACTCCGCAAGAGAGGCCAGAATGACAGCTGACAGGGTCTATGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678134.1
CDS-3UTR CAA 90 bp GTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCAATCACGCGGAACACTaGATTCTGGTGTTTCCCCCT +
Preference number: 5 (lower is better)
Translates to: VIRPTTWKANLCLQAQNINHAEH*ILVFPP
Trigger: AGGGGGAAACACCAGAATCAAGTGTTCCGCGTGATT...GATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333681.5
ENST00000398117.1
CDS-3UTR CAA 90 bp TATGGAACACAAAAGTCAAACAGATTTCCTCAGCCTCACAAGGTTCCAATTTTCGGCGACATCTCCCGGTaGACGCTCTCCACACACATG +
Preference number: 5 (lower is better)
Translates to: YGTQKSNRFPQPHKVPIFGDISR*TLSTHM
Trigger: CATGTGTGTGGAGAGCGTCAACCGGGAGATGTCGCC...GAAAATTGGAACCTTGTGAGGCTGAGGAAATCTGTTTGACTTTTGTGTTCCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR CAA 90 bp ACGTTTTGCCTGAAGACTGTTAATTGTTGTGTGTGTGTGTGTCTGTCTGTGTGTTTTGGGGCAGGCATGTaGACTTCACTTGTGGCCCAG +
Preference number: 5 (lower is better)
Translates to: TFCLKTVNCCVCVCLSVCFGAGM*TSLVAQ
Trigger: CTGGGCCACAAGTGAAGTCAACATGCCTGCCCCAAA...ACACACAGACAGACACACACACACACAACAATTAACAGTCTTCAGGCAAAACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp CTCTGGGTAACTCTAGCCTTCCTGATGCGGAAGTCACCGAAATGTTCACTTCCTGAACCTTTTGCATATTaGTTTGGGGCAGGCATGTTG +
Preference number: 5 (lower is better)
Translates to: LWVTLAFLMRKSPKCSLPEPFAY*FGAGML
Trigger: CAACATGCCTGCCCCAAACAAATATGCAAAAGGTTC...AGGAAGTGAACATTTCGGTGACTTCCGCATCAGGAAGGCTAGAGTTACCCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp TGGGTACTAGGTCCATCTGAAGTTCCCAACTCTTTTCCTCCCACCAGGTATGCAGAACCTTTTGCATATTaGTTTGGGGCAGGCATGTTG +
Preference number: 5 (lower is better)
Translates to: WVLGPSEVPNSFPPTRYAEPFAY*FGAGML
Trigger: CAACATGCCTGCCCCAAACAAATATGCAAAAGGTTC...TGCATACCTGGTGGGAGGAAAAGAGTTGGGAACTTCAGATGGACCTAGTACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp GGTCCATCTGAAGTTCCCAACTCTTTTCCTCCCACCAGGTATGCATCATGTGAGAAACAGCCTGCAGCTTaGTTTCATGGTACATCACTG +
Preference number: 5 (lower is better)
Translates to: GPSEVPNSFPPTRYASCEKQPAA*FHGTSL
Trigger: CAGTGATGTACCATGAAACAAAGCTGCAGGCTGTTT...CTCACATGATGCATACCTGGTGGGAGGAAAAGAGTTGGGAACTTCAGATGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp AATGCAATCCACTGTCACTCTTGCAAATTCTACCTTGGAGGGAAAAACTTAATGAATGGGCCGTGGCCATaGCCTCTCCTCACGTTCCCA +
Preference number: 5 (lower is better)
Translates to: NAIHCHSCKFYLGGKNLMNGPWP*PLLTFP
Trigger: TGGGAACGTGAGGAGAGGCAATGGCCACGGCCCATT...CATTAAGTTTTTCCCTCCAAGGTAGAATTTGCAAGAGTGACAGTGGATTGCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp TTCCTGATGCGGAAGTCACCGAAATGTTCACTTCCTCAAGTTCCAGAGGATTCTGAATTAAATGCGGAATaGCCCAGGGACGAGGAAACC +
Preference number: 5 (lower is better)
Translates to: FLMRKSPKCSLPQVPEDSELNAE*PRDEET
Trigger: GGTTTCCTCGTCCCTGGGCAATTCCGCATTTAATTC...AGAATCCTCTGGAACTTGAGGAAGTGAACATTTCGGTGACTTCCGCATCAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp CCCACAGGAACCCTCCCTCTGTTAATATCACAGCCCCCAGGGCAAAGAAATGCAGAATCTGCTGGTCATTaGCCATCTGGATTTTTAACT +
Preference number: 5 (lower is better)
Translates to: PTGTLPLLISQPPGQRNAESAGH*PSGFLT
Trigger: AGTTAAAAATCCAGATGGCAAATGACCAGCAGATTC...TGCATTTCTTTGCCCTGGGGGCTGTGATATTAACAGAGGGAGGGTTCCTGTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp GTGATACATGTCTTAAGAAGGGTCGTGGCTCCCATGCTCCACGTGAAAACGGGCCTCTGTGAATCCCGTTaGAACAACAACAAAAGACAA +
Preference number: 5 (lower is better)
Translates to: VIHVLRRVVAPMLHVKTGLCESR*NNNKRQ
Trigger: TTGTCTTTTGTTGTTGTTCAAACGGGATTCACAGAG...GCCCGTTTTCACGTGGAGCATGGGAGCCACGACCCTTCTTAAGACATGTATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp CTCTGGGTAACTCTAGCCTTCCTGATGCGGAAGTCACCGAAATGTTCACTTCCTGCCCTTGTCCCCAATTaGGAAAGTGCATATACTCTA +
Preference number: 5 (lower is better)
Translates to: LWVTLAFLMRKSPKCSLPALVPN*ESAYTL
Trigger: TAGAGTATATGCACTTTCCAAATTGGGGACAAGGGC...AGGAAGTGAACATTTCGGTGACTTCCGCATCAGGAAGGCTAGAGTTACCCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp GTGATACATGTCTTAAGAAGGGTCGTGGCTCCCATGCTCCACGTGAAAACGGGCGTATGCAGAACAACCTaGTTGTTGATAGGATGTTTG +
Preference number: 5 (lower is better)
Translates to: VIHVLRRVVAPMLHVKTGVCRTT*LLIGCL
Trigger: CAAACATCCTATCAACAACAAGGTTGTTCTGCATAC...GCCCGTTTTCACGTGGAGCATGGGAGCCACGACCCTTCTTAAGACATGTATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp TCTAAAGCAGCTTGGAGGATCTTACCACGTGGAGCATACTGCAAACTGACTCCATCTTCTGTGCTCAGCTaGGTATGCAGAACAACCTTG +
Preference number: 5 (lower is better)
Translates to: SKAAWRILPRGAYCKLTPSSVLS*VCRTTL
Trigger: CAAGGTTGTTCTGCATACCAAGCTGAGCACAGAAGA...TGGAGTCAGTTTGCAGTATGCTCCACGTGGTAAGATCCTCCAAGCTGCTTTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp GCCACACGAAGCGGTGCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTTATGTGTACAGTGTaGCAGAATATCAGCCACCTC +
Preference number: 5 (lower is better)
Translates to: ATRSGAWQLVVGFPKTGVFMCTV*QNISHL
Trigger: GAGGTGGCTGATATTCTGCAACACTGTACACATAAA...AACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACCGCTTCGTGTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp TTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGGTGCTTGGCAATTATTTATGTGTACAGTGTaGCAGAATATCAGCCACCTC +
Preference number: 5 (lower is better)
Translates to: FTGTEHPGGATRSGAWQLFMCTV*QNISHL
Trigger: GAGGTGGCTGATATTCTGCAACACTGTACACATAAA...TAATTGCCAAGCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp CACAATGCCTTATTCAGACCTAGGAATAAATCCACACTCCACTCTACAGCCAATTTGGGAGTGAACGCTTaGTCCAGAGGAGGAGGTAGG +
Preference number: 5 (lower is better)
Translates to: HNALFRPRNKSTLHSTANLGVNA*SRGGGR
Trigger: CCTACCTCCTCCTCTGGACAAAGCGTTCACTCCCAA...ATTGGCTGTAGAGTGGAGTGTGGATTTATTCCTAGGTCTGAATAAGGCATTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR CAA 90 bp CACAATGCCTTATTCAGACCTAGGAATAAATCCACACTCCACTCTACAGCCAATGCGTTATCGGTCAGGTaGGGAGTGAACGCTTTGTCC +
Preference number: 5 (lower is better)
Translates to: HNALFRPRNKSTLHSTANALSVR*GVNALS
Trigger: GGACAAAGCGTTCACTCCCAACCTGACCGATAACGC...ATTGGCTGTAGAGTGGAGTGTGGATTTATTCCTAGGTCTGAATAAGGCATTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR CAA 90 bp AACTCAATCCCTTGCCTGCAAGAGTCCCTTTGTCTTAAAGAAGCTGCAAGGTCACCAAAACTCAATCCCTaGCCTGCAAGAGTCCCTTTG +
Preference number: 5 (lower is better)
Translates to: NSIPCLQESLCLKEAARSPKLNP*PARVPL
Trigger: CAAAGGGACTCTTGCAGGCAAGGGATTGAGTTTTGG...TGACCTTGCAGCTTCTTTAAGACAAAGGGACTCTTGCAGGCAAGGGATTGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR CAA 90 bp CTTAAACAGCCTGCAGCTTTGTTTCATGGTACATCACTGACAATGCATATTATTGGCGACATCTCCCGGTaGACGCTCTCCACACACATG +
Preference number: 5 (lower is better)
Translates to: LKQPAALFHGTSLTMHIIGDISR*TLSTHM
Trigger: CATGTGTGTGGAGAGCGTCAACCGGGAGATGTCGCC...AATAATATGCATTGTCAGTGATGTACCATGAAACAAAGCTGCAGGCTGTTTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS-3UTR CAA 90 bp AATGATTTTGGCAGGATAGCAGCACAGGATTGGATATTCCATATTCATCACTTTAATGGGCCGTGGCCATaGCCTCTCCTCACGTTCCCA +
Preference number: 5 (lower is better)
Translates to: NDFGRIAAQDWIFHIHHFNGPWP*PLLTFP
Trigger: TGGGAACGTGAGGAGAGGCAATGGCCACGGCCCATT...AAAGTGATGAATATGGAATATCCAATCCTGTGCTGCTATCCTGCCAAAATCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp ACACGAAGCGGTGCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGGGAAATGCACATGACTaGGTTGAAACAAAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: TRSGAWQLVVGFPKTGVLGNAHD*VETKLL
Trigger: GAGGAGCTTTGTTTCAACCAAGTCATGTGCATTTCC...CAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACCGCTTCGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp CTCTGGGTAACTCTAGCCTTCCTGATGCGGAAGTCACCGAAATGTTCACTTCCTCAAACCACCATAGATTaGAATCTGCTGGTCATTTGC +
Preference number: 5 (lower is better)
Translates to: LWVTLAFLMRKSPKCSLPQTTID*NLLVIC
Trigger: GCAAATGACCAGCAGATTCAAATCTATGGTGGTTTG...AGGAAGTGAACATTTCGGTGACTTCCGCATCAGGAAGGCTAGAGTTACCCAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp CATCCGTCTGCTCTTCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTACAAACCACCATAGATTaGAATCTGCTGGTCATTTGC +
Preference number: 5 (lower is better)
Translates to: HPSALQMVIRPTTWKANLQTTID*NLLVIC
Trigger: GCAAATGACCAGCAGATTCAAATCTATGGTGGTTTG...TAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGAAGAGCAGACGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp GATTTAAGGGCATTTTTCCCATCGCTGTCCTTCGGCGTGGAAATCTCAGTGGGTAGGGATGGTTCTCTGTaGCCCAACTGCAAAATAATT +
Preference number: 5 (lower is better)
Translates to: DLRAFFPSLSFGVEISVGRDGSL*PNCKII
Trigger: AATTATTTTGCAGTTGGGCAACAGAGAACCATCCCT...ACCCACTGAGATTTCCACGCCGAAGGACAGCGATGGGAAAAATGCCCTTAAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp CAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACGCCCTTGTCCCCAATTaGGAAAGTGCATATACTCTA +
Preference number: 5 (lower is better)
Translates to: QHGKRIYVYRHRTSRWSHALVPN*ESAYTL
Trigger: TAGAGTATATGCACTTTCCAAATTGGGGACAAGGGC...GTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp TGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCCCTTGTCCCCAATTaGGAAAGTGCATATACTCTA +
Preference number: 5 (lower is better)
Translates to: WKANLCLQAQNIQVEPHEALVPN*ESAYTL
Trigger: TAGAGTATATGCACTTTCCAAATTGGGGACAAGGGC...TTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp GTAGCTGAGACTCAGGGCTTATCTCACCTTCTCAGAATGCTTTTGAAGAATCAATCATTCTGGCCTCTCTaGCGGAGTATTTGTGCAGCG +
Preference number: 5 (lower is better)
Translates to: VAETQGLSHLLRMLLKNQSFWPL*RSICAA
Trigger: CGCTGCACAAATACTCCGCAAGAGAGGCCAGAATGA...TTGATTCTTCAAAAGCATTCTGAGAAGGTGAGATAAGCCCTGAGTCTCAGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp GTCTGGCTTCATACCACAGGTTTCCTGCTTTCTTGGTGGAGCGTAAGCACCACTGTATGCAGAACAACCTaGTTGTTGATAGGATGTTTG +
Preference number: 5 (lower is better)
Translates to: VWLHTTGFLLSWWSVSTTVCRTT*LLIGCL
Trigger: CAAACATCCTATCAACAACAAGGTTGTTCTGCATAC...AGTGGTGCTTACGCTCCACCAAGAAAGCAGGAAACCTGTGGTATGAAGCCAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp TTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGCGGTGCTTGGCAATTAGTATGCAGAACAACCTaGTTGTTGATAGGATGTTTG +
Preference number: 5 (lower is better)
Translates to: FTGTEHPGGATRSGAWQLVCRTT*LLIGCL
Trigger: CAAACATCCTATCAACAACAAGGTTGTTCTGCATAC...TAATTGCCAAGCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp TGGGTACTAGGTCCATCTGAAGTTCCCAACTCTTTTCCTCCCACCAGGTATGCAAGTCTCAGAATTTTCTaGATTGAGCGAGCCTTTCCA +
Preference number: 5 (lower is better)
Translates to: WVLGPSEVPNSFPPTRYASLRIF*IERAFP
Trigger: TGGAAAGGCTCGCTCAATCAAGAAAATTCTGAGACT...TGCATACCTGGTGGGAGGAAAAGAGTTGGGAACTTCAGATGGACCTAGTACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp TTTAAGGGCATTTTTCCCATCGCTGTCCTTCGGCGTGGAAATCTCAGTGGGTACTTTATGTGTACAGTGTaGCAGAATATCAGCCACCTC +
Preference number: 5 (lower is better)
Translates to: FKGIFPIAVLRRGNLSGYFMCTV*QNISHL
Trigger: GAGGTGGCTGATATTCTGCAACACTGTACACATAAA...GTACCCACTGAGATTTCCACGCCGAAGGACAGCGATGGGAAAAATGCCCTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp AACTCAATCCCTTGCCTGCAAGAGTCCCTTTGTCTTAAAGAAGCTGCAAGGTCACGATTGATGATGCCCTaGGTCTTCTGTGGAGTCTAT +
Preference number: 5 (lower is better)
Translates to: NSIPCLQESLCLKEAARSRLMMP*VFCGVY
Trigger: ATAGACTCCACAGAAGACCAAGGGCATCATCAATCG...TGACCTTGCAGCTTCTTTAAGACAAAGGGACTCTTGCAGGCAAGGGATTGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR CAA 90 bp GAAGGGGTACCATTTACCACCACATCCTACTGGATTACAAACGCTAGATCTTTGGTCTTGCTGCCAAAATaGGCCATAAGCAGCCAATCC +
Preference number: 5 (lower is better)
Translates to: EGVPFTTTSYWITNARSLVLLPK*AISSQS
Trigger: GGATTGGCTGCTTATGGCCAATTTTGGCAGCAAGAC...CAAAGATCTAGCGTTTGTAATCCAGTAGGATGTGGTGGTAAATGGTACCCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR CAA 90 bp GTAGCTGAGACTCAGGGCTTATCTCACCTTCTCAGAATGCTTTTGAAGAATCAAATGTGCTTTGCATTCTaGGACGAGGGGGTGTCTTCA +
Preference number: 5 (lower is better)
Translates to: VAETQGLSHLLRMLLKNQMCFAF*DEGVSS
Trigger: TGAAGACACCCCCTCGTCCAAGAATGCAAAGCACAT...TTGATTCTTCAAAAGCATTCTGAGAAGGTGAGATAAGCCCTGAGTCTCAGCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333681.5
ENST00000398117.1
CDS-3UTR CAA 90 bp GATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGAACCTTTTGCATATTaGTTTGGGGCAGGCATGTTG +
Preference number: 5 (lower is better)
Translates to: DPANNMESESMFTGTEHPEPFAY*FGAGML
Trigger: CAACATGCCTGCCCCAAACAAATATGCAAAAGGTTC...TGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp AACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCAAACAGCCTGCAGCTTaGTTTCATGGTACATCACTG +
Preference number: 5 (lower is better)
Translates to: NNMESESMFTGTEHPGGAKQPAA*FHGTSL
Trigger: CAGTGATGTACCATGAAACAAAGCTGCAGGCTGTTT...GGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp ATGCATATTATTTCTACTGCTTTAGTGAACCTTTTGCATATTTGTTTGGGGCAGGACCACACTGCCCTGTaGATCATCCCTGGAGGAGGC +
Preference number: 5 (lower is better)
Translates to: MHIISTALVNLLHICLGQDHTAL*IIPGGG
Trigger: GCCTCCTCCAGGGATGATCAACAGGGCAGTGTGGTC...CTGCCCCAAACAAATATGCAAAAGGTTCACTAAAGCAGTAGAAATAATATGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp GTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCATGCACATGACTTGGTaGAAACAAAGCTCCTCAGTG +
Preference number: 5 (lower is better)
Translates to: VIRPTTWKANLCLQAQNIMHMTW*KQSSSV
Trigger: CACTGAGGAGCTTTGTTTCAACCAAGTCATGTGCAT...GATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp TCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAGGAAATGCACATGACTaGGTTGAAACAAAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: SDGDPANNMESESMFTGTGNAHD*VETKLL
Trigger: GAGGAGCTTTGTTTCAACCAAGTCATGTGCATTTCC...TGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp TGGGTACTAGGTCCATCTGAAGTTCCCAACTCTTTTCCTCCCACCAGGTATGCAGATAGCAGCACAGGATaGGATATTCCATATTCATCA +
Preference number: 5 (lower is better)
Translates to: WVLGPSEVPNSFPPTRYADSSTG*DIPYSS
Trigger: TGATGAATATGGAATATCCAATCCTGTGCTGCTATC...TGCATACCTGGTGGGAGGAAAAGAGTTGGGAACTTCAGATGGACCTAGTACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp GGTCCATCTGAAGTTCCCAACTCTTTTCCTCCCACCAGGTATGCATCATGTGAGGATAGCAGCACAGGATaGGATATTCCATATTCATCA +
Preference number: 5 (lower is better)
Translates to: GPSEVPNSFPPTRYASCEDSSTG*DIPYSS
Trigger: TGATGAATATGGAATATCCAATCCTGTGCTGCTATC...CTCACATGATGCATACCTGGTGGGAGGAAAAGAGTTGGGAACTTCAGATGGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp GATTTAAGGGCATTTTTCCCATCGCTGTCCTTCGGCGTGGAAATCTCAGTGGGTCTCTGTGAATCCCGTTaGAACAACAACAAAAGACAA +
Preference number: 5 (lower is better)
Translates to: DLRAFFPSLSFGVEISVGLCESR*NNNKRQ
Trigger: TTGTCTTTTGTTGTTGTTCAAACGGGATTCACAGAG...ACCCACTGAGATTTCCACGCCGAAGGACAGCGATGGGAAAAATGCCCTTAAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp CCGTCTGCTCTTCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTCAAAATGTTTCTCATTaGTCACACAAGGTTCTTCGC +
Preference number: 5 (lower is better)
Translates to: PSALQMVIRPTTWKANLCQNVSH*SHKVLR
Trigger: GCGAAGAACCTTGTGTGACAAATGAGAAACATTTTG...ACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGAAGAGCAGACGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp CCACCAGTGTTCCCATCTTCTGTGCTCAGCTTGGTATGCAGAACAACCTTGTTGGTATGCAGAACAACCTaGTTGTTGATAGGATGTTTG +
Preference number: 5 (lower is better)
Translates to: PPVFPSSVLSLVCRTTLLVCRTT*LLIGCL
Trigger: CAAACATCCTATCAACAACAAGGTTGTTCTGCATAC...CAACAAGGTTGTTCTGCATACCAAGCTGAGCACAGAAGATGGGAACACTGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp TTCATTGTTACTTCTAAAGCAGCTTGGAGGATCTTACCACGTGGAGCATACTGCTCTTCTGTGCTCAGCTaGGTATGCAGAACAACCTTG +
Preference number: 5 (lower is better)
Translates to: FIVTSKAAWRILPRGAYCSSVLS*VCRTTL
Trigger: CAAGGTTGTTCTGCATACCAAGCTGAGCACAGAAGA...GCAGTATGCTCCACGTGGTAAGATCCTCCAAGCTGCTTTAGAAGTAACAATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp CAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACTTTATGTGTACAGTGTaGCAGAATATCAGCCACCTC +
Preference number: 5 (lower is better)
Translates to: QHGKRIYVYRHRTSRWSHFMCTV*QNISHL
Trigger: GAGGTGGCTGATATTCTGCAACACTGTACACATAAA...GTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp CACAATGCCTTATTCAGACCTAGGAATAAATCCACACTCCACTCTACAGCCAATTCCTGGACCTTCAGCTaGAGAAACACTGAAGGGGTA +
Preference number: 5 (lower is better)
Translates to: HNALFRPRNKSTLHSTANSWTFS*RNTEGV
Trigger: TACCCCTTCAGTGTTTCTCAAGCTGAAGGTCCAGGA...ATTGGCTGTAGAGTGGAGTGTGGATTTATTCCTAGGTCTGAATAAGGCATTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR CAA 90 bp TGGGTACTAGGTCCATCTGAAGTTCCCAACTCTTTTCCTCCCACCAGGTATGCATCCACAAAGGCATCATaGGTTTTCCTCTTTTGGAAA +
Preference number: 5 (lower is better)
Translates to: WVLGPSEVPNSFPPTRYASTKAS*VFLFWK
Trigger: TTTCCAAAAGAGGAAAACCAATGATGCCTTTGTGGA...TGCATACCTGGTGGGAGGAAAAGAGTTGGGAACTTCAGATGGACCTAGTACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000678349.1
CDS CCA 90 bp GGTGTCTTCAATCACGCGGAACACTTGATTCTGGTGTTTCCCCCTTaGCATGAGATGCAGGAAATTTTTATTCCAATTCCTTTCGGATCT +
Preference number: 5 (lower is better)
Translates to: GVFNHAEHLILVFPP*HEMQEIFIPIPFGS
Trigger: AGATCCGAAAGGAATTGGAATAAAAATTTCCTGCATCTCATGCCAAGGGGGAAACACCAGAATCAAGTGTTCCGCGTGATTGAAGACACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000333681.5
ENST00000398117.1
CDS-3UTR CAA 90 bp CACAATGCCTTATTCAGACCTAGGAATAAATCCACACTCCACTCTACAGCCAATTTTATTGGATGTGCTTaGCATTCTTGGACGAGGGGG +
Preference number: 5 (lower is better)
Translates to: HNALFRPRNKSTLHSTANFIGCA*HSWTRG
Trigger: CCCCCTCGTCCAAGAATGCAAAGCACATCCAATAAA...ATTGGCTGTAGAGTGGAGTGTGGATTTATTCCTAGGTCTGAATAAGGCATTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR CAA 90 bp AAACAGCCTGCAGCTTTGTTTCATGGTACATCACTGACAATGCATATTATTTCTTTTGGGGCAGGCATGTaGACTTCACTTGTGGCCCAG +
Preference number: 5 (lower is better)
Translates to: KQPAALFHGTSLTMHIISFGAGM*TSLVAQ
Trigger: CTGGGCCACAAGTGAAGTCAACATGCCTGCCCCAAA...AGAAATAATATGCATTGTCAGTGATGTACCATGAAACAAAGCTGCAGGCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp ACAGCCTGCAGCTTTGTTTCATGGTACATCACTGACAATGCATATTATTTCTACCACACGAAGCGGTGCTaGGCAATTAGTGGTCGGATT +
Preference number: 5 (lower is better)
Translates to: TACSFVSWYITDNAYYFYHTKRC*AISGRI
Trigger: AATCCGACCACTAATTGCCAAGCACCGCTTCGTGTG...GTAGAAATAATATGCATTGTCAGTGATGTACCATGAAACAAAGCTGCAGGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp AATGCAATCCACTGTCACTCTTGCAAATTCTACCTTGGAGGGAAAAACTTAATGCACACGAAGCGGTGCTaGGCAATTAGTGGTCGGATT +
Preference number: 5 (lower is better)
Translates to: NAIHCHSCKFYLGGKNLMHTKRC*AISGRI
Trigger: AATCCGACCACTAATTGCCAAGCACCGCTTCGTGTG...CATTAAGTTTTTCCCTCCAAGGTAGAATTTGCAAGAGTGACAGTGGATTGCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp TTCATTGTTACTTCTAAAGCAGCTTGGAGGATCTTACCACGTGGAGCATACTGCATGCACATGACTTGGTaGAAACAAAGCTCCTCAGTG +
Preference number: 5 (lower is better)
Translates to: FIVTSKAAWRILPRGAYCMHMTW*KQSSSV
Trigger: CACTGAGGAGCTTTGTTTCAACCAAGTCATGTGCAT...GCAGTATGCTCCACGTGGTAAGATCCTCCAAGCTGCTTTAGAAGTAACAATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp CAAGTTCCAGAGGATTCTGTTTCTTACTCAGACAGAGCCAGTATTGGGAGTTGGCAAACCACCATAGATTaGAATCTGCTGGTCATTTGC +
Preference number: 5 (lower is better)
Translates to: QVPEDSVSYSDRASIGSWQTTID*NLLVIC
Trigger: GCAAATGACCAGCAGATTCAAATCTATGGTGGTTTG...CCAACTCCCAATACTGGCTCTGTCTGAGTAAGAAACAGAATCCTCTGGAACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp TGGAAAGCGAATCTATGTTTACAGGCACAGAACATCCAGGTGGAGCCACACGAAGATAGCAGCACAGGATaGGATATTCCATATTCATCA +
Preference number: 5 (lower is better)
Translates to: WKANLCLQAQNIQVEPHEDSSTG*DIPYSS
Trigger: TGATGAATATGGAATATCCAATCCTGTGCTGCTATC...TTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp CGAAGCGGTGCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGATGCTCTGTGAATCCCGTTaGAACAACAACAAAAGACAA +
Preference number: 5 (lower is better)
Translates to: RSGAWQLVVGFPKTGVLMLCESR*NNNKRQ
Trigger: TTGTCTTTTGTTGTTGTTCAAACGGGATTCACAGAG...CATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACCGCTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp CTTCAGATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCAAGGGATGGTTCTCTGTaGCCCAACTGCAAAATAATT +
Preference number: 5 (lower is better)
Translates to: LQMVIRPTTWKANLCLQARDGSL*PNCKII
Trigger: AATTATTTTGCAGTTGGGCAACAGAGAACCATCCCT...TGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp CCTCCCACCAGGTATGCATCATGTGAGTCATATGCAAAGAGTCTCTTCTTCAGGCAAAATGTTTCTCATTaGTCACACAAGGTTCTTCGC +
Preference number: 5 (lower is better)
Translates to: PPTRYASCESYAKSLFFRQNVSH*SHKVLR
Trigger: GCGAAGAACCTTGTGTGACAAATGAGAAACATTTTG...CCTGAAGAAGAGACTCTTTGCATATGACTCACATGATGCATACCTGGTGGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp CTGATGCGGAAGTCACCGAAATGTTCACTTCCTCAAGTTCCAGAGGATTCTGTTTTGAAATTTATACCATaGCACTGCCAAACGGAGCTG +
Preference number: 5 (lower is better)
Translates to: LMRKSPKCSLPQVPEDSVLKFIP*HCQTEL
Trigger: CAGCTCCGTTTGGCAGTGCAATGGTATAAATTTCAA...AACAGAATCCTCTGGAACTTGAGGAAGTGAACATTTCGGTGACTTCCGCATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp GATGGTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAATTGAAATTTATACCATaGCACTGCCAAACGGAGCTG +
Preference number: 5 (lower is better)
Translates to: DGDPANNMESESMFTGTELKFIP*HCQTEL
Trigger: CAGCTCCGTTTGGCAGTGCAATGGTATAAATTTCAA...TTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp ACACGAAGCGGTGCTTGGCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGTGCAGAACAACCTTGTaGTTGATAGGATGTTTGCTT +
Preference number: 5 (lower is better)
Translates to: TRSGAWQLVVGFPKTGVLCRTTL*LIGCLL
Trigger: AAGCAAACATCCTATCAACAACAAGGTTGTTCTGCA...CAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGCCAAGCACCGCTTCGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp GGGCCCACGGCAGATTTTCCAAAAGGTTTAGGTGCATGGATTTACTCAGTATCTAGTCTCAGAATTTTCTaGATTGAGCGAGCCTTTCCA +
Preference number: 5 (lower is better)
Translates to: GPTADFPKGLGAWIYSVSSLRIF*IERAFP
Trigger: TGGAAAGGCTCGCTCAATCAAGAAAATTCTGAGACT...AGATACTGAGTAAATCCATGCACCTAAACCTTTTGGAAAATCTGCCGTGGGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp AATGATTTTGGCAGGATAGCAGCACAGGATTGGATATTCCATATTCATCACTTTGCGTTATCGGTCAGGTaGGGAGTGAACGCTTTGTCC +
Preference number: 5 (lower is better)
Translates to: NDFGRIAAQDWIFHIHHFALSVR*GVNALS
Trigger: GGACAAAGCGTTCACTCCCAACCTGACCGATAACGC...AAAGTGATGAATATGGAATATCCAATCCTGTGCTGCTATCCTGCCAAAATCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678349.1
CDS-3UTR CAA 90 bp GTTTCTCATTTGTCACACAAGGTTCTTCGCAGAGGCATCACATCGACCCCAATAGGAAAATTTTACCGATaGATGATGCCCTTGGTCTTC +
Preference number: 5 (lower is better)
Translates to: VSHLSHKVLRRGITSTPIGKFYR*MMPLVF
Trigger: GAAGACCAAGGGCATCATCAATCGGTAAAATTTTCC...TATTGGGGTCGATGTGATGCCTCTGCGAAGAACCTTGTGTGACAAATGAGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000678349.1
CDS CCA 90 bp CATTCAGCCTTCAAAATGAAGGAAGCTGTGACACAGGCCAAAACATaGATGAACCTTGAAGACATCATGCTTAGTGTAACAAGCCAGTCA +
Preference number: 5 (lower is better)
Translates to: HSAFKMKEAVTQAKT*MNLEDIMLSVTSQS
Trigger: TGACTGGCTTGTTACACTAAGCATGATGTCTTCAAGGTTCATCCATGTTTTGGCCTGTGTCACAGCTTCCTTCATTTTGAAGGCTGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677227.1
CDS-3UTR CAA 90 bp ATAGCTGATTCGACGTTTTGCCTGAAGACTGTTAATTGTTGTGTGTGTGTGTGTTTTATTGGATGTGCTTaGCATTCTTGGACGAGGGGG +
Preference number: 5 (lower is better)
Translates to: IADSTFCLKTVNCCVCVCFIGCA*HSWTRG
Trigger: CCCCCTCGTCCAAGAATGCAAAGCACATCCAATAAA...ACACACACACACACAACAATTAACAGTCTTCAGGCAAAACGTCGAATCAGCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333681.5
ENST00000398117.1
CDS-3UTR CAA 90 bp TTTTTAGAGCCCTTGTCCCCAATTTGGAAAGTGCATATACTCTATTTAACTCTGCACACGAAGCGGTGCTaGGCAATTAGTGGTCGGATT +
Preference number: 5 (lower is better)
Translates to: FLEPLSPIWKVHILYLTLHTKRC*AISGRI
Trigger: AATCCGACCACTAATTGCCAAGCACCGCTTCGTGTG...CAGAGTTAAATAGAGTATATGCACTTTCCAAATTGGGGACAAGGGCTCTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp GTGATCCGGCCAACAACATGGAAAGCGAATCTATGTTTACAGGCACAGAACATCGAATCTGCTGGTCATTaGCCATCTGGATTTTTAACT +
Preference number: 5 (lower is better)
Translates to: VIRPTTWKANLCLQAQNIESAGH*PSGFLT
Trigger: AGTTAAAAATCCAGATGGCAAATGACCAGCAGATTC...GATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp TATGCATCATGTGAGTCATATGCAAAGAGTCTCTTCTTCAGGCCAGGGAGGCATGAATCTGCTGGTCATTaGCCATCTGGATTTTTAACT +
Preference number: 5 (lower is better)
Translates to: YASCESYAKSLFFRPGRHESAGH*PSGFLT
Trigger: AGTTAAAAATCCAGATGGCAAATGACCAGCAGATTC...ATGCCTCCCTGGCCTGAAGAAGAGACTCTTTGCATATGACTCACATGATGCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp AGCTTGGAGGATCTTACCACGTGGAGCATACTGCAAACTGACTCCATTAAAATGAGGGATGGTTCTCTGTaGCCCAACTGCAAAATAATT +
Preference number: 5 (lower is better)
Translates to: SLEDLTTWSILQTDSIKMRDGSL*PNCKII
Trigger: AATTATTTTGCAGTTGGGCAACAGAGAACCATCCCT...CATTTTAATGGAGTCAGTTTGCAGTATGCTCCACGTGGTAAGATCCTCCAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp AAACAGCCTGCAGCTTTGTTTCATGGTACATCACTGACAATGCATATTATTTCTTCATTCTGGCCTCTCTaGCGGAGTATTTGTGCAGCG +
Preference number: 5 (lower is better)
Translates to: KQPAALFHGTSLTMHIISSFWPL*RSICAA
Trigger: CGCTGCACAAATACTCCGCAAGAGAGGCCAGAATGA...AGAAATAATATGCATTGTCAGTGATGTACCATGAAACAAAGCTGCAGGCTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp TTGCCCAGGGACGAGGAAACCTTCAAGAAACAAGGTCAAAGGGACAACAGATATTGCAGAACAACCTTGTaGTTGATAGGATGTTTGCTT +
Preference number: 5 (lower is better)
Translates to: LPRDEETFKKQGQRDNRYCRTTL*LIGCLL
Trigger: AAGCAAACATCCTATCAACAACAAGGTTGTTCTGCA...ATATCTGTTGTCCCTTTGACCTTGTTTCTTGAAGGTTTCCTCGTCCCTGGGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp GGGTGCGTATCCAAAATATATGAATATACACAATCAGGGCTTAAGGTACTGGATTTCAGGGGAGCTTGTTaGGGATGCAGACTGTCAAGA +
Preference number: 5 (lower is better)
Translates to: GCVSKIYEYTQSGLKVLDFRGAC*GCRLSR
Trigger: TCTTGACAGTCTGCATCCCAAACAAGCTCCCCTGAA...ATCCAGTACCTTAAGCCCTGATTGTGTATATTCATATATTTTGGATACGCACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678349.1
CDS-3UTR CAA 90 bp CACAATGCCTTATTCAGACCTAGGAATAAATCCACACTCCACTCTACAGCCAATTCCAGTCCAAGGACTTaGGAATGTCAACTTAGCTCT +
Preference number: 5 (lower is better)
Translates to: HNALFRPRNKSTLHSTANSSPRT*ECQLSS
Trigger: AGAGCTAAGTTGACATTCCAAAGTCCTTGGACTGGA...ATTGGCTGTAGAGTGGAGTGTGGATTTATTCCTAGGTCTGAATAAGGCATTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR CAA 90 bp GGAACATGGCACACACTGGAGATTCCAGTCCAAGGACTTTGGAATGTCAACTTAGCTCTTTCATGTAATTaGTACACTGGCATGAGAATG +
Preference number: 5 (lower is better)
Translates to: GTWHTLEIPVQGLWNVNLALSCN*YTGMRM
Trigger: CATTCTCATGCCAGTGTACAAATTACATGAAAGAGC...TAAGTTGACATTCCAAAGTCCTTGGACTGGAATCTCCAGTGTGTGCCATGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR CAA 90 bp ATAGCTGATTCGACGTTTTGCCTGAAGACTGTTAATTGTTGTGTGTGTGTGTGTAAACAGCCTGCAGCTTaGTTTCATGGTACATCACTG +
Preference number: 5 (lower is better)
Translates to: IADSTFCLKTVNCCVCVCKQPAA*FHGTSL
Trigger: CAGTGATGTACCATGAAACAAAGCTGCAGGCTGTTT...ACACACACACACACAACAATTAACAGTCTTCAGGCAAAACGTCGAATCAGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp ATAGCTGATTCGACGTTTTGCCTGAAGACTGTTAATTGTTGTGTGTGTGTGTGTGGAAATGCACATGACTaGGTTGAAACAAAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: IADSTFCLKTVNCCVCVCGNAHD*VETKLL
Trigger: GAGGAGCTTTGTTTCAACCAAGTCATGTGCATTTCC...ACACACACACACACAACAATTAACAGTCTTCAGGCAAAACGTCGAATCAGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp AGATGCATATTTCATGATTGTCCAAGGTCATGGTTGTCCAAAGACATGGAACAGGGAAATGCACATGACTaGGTTGAAACAAAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: RCIFHDCPRSWLSKDMEQGNAHD*VETKLL
Trigger: GAGGAGCTTTGTTTCAACCAAGTCATGTGCATTTCC...CTGTTCCATGTCTTTGGACAACCATGACCTTGGACAATCATGAAATATGCATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp TCCATGACACCTCACTTCAATGCTTCTTTTAGGATTTGTGACCCTCTCCAAAGTCAAACCACCATAGATTaGAATCTGCTGGTCATTTGC +
Preference number: 5 (lower is better)
Translates to: SMTPHFNASFRICDPLQSQTTID*NLLVIC
Trigger: GCAAATGACCAGCAGATTCAAATCTATGGTGGTTTG...ACTTTGGAGAGGGTCACAAATCCTAAAAGAAGCATTGAAGTGAGGTGTCATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp GTGAGATGCATATTTCATGATTGTCCAAGGTCATGGTTGTCCAAAGACATGGAAGCCCTTGTCCCCAATTaGGAAAGTGCATATACTCTA +
Preference number: 5 (lower is better)
Translates to: VRCIFHDCPRSWLSKDMEALVPN*ESAYTL
Trigger: TAGAGTATATGCACTTTCCAAATTGGGGACAAGGGC...TTCCATGTCTTTGGACAACCATGACCTTGGACAATCATGAAATATGCATCTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp ACGTTTTGCCTGAAGACTGTTAATTGTTGTGTGTGTGTGTGTCTGTCTGTGTGTAGTCTCAGAATTTTCTaGATTGAGCGAGCCTTTCCA +
Preference number: 5 (lower is better)
Translates to: TFCLKTVNCCVCVCLSVCSLRIF*IERAFP
Trigger: TGGAAAGGCTCGCTCAATCAAGAAAATTCTGAGACT...ACACACAGACAGACACACACACACACAACAATTAACAGTCTTCAGGCAAAACGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp AGACATATCCAGCTTGAAATTTATACCATTGCACTGCCAAACGGAGCTGCACTTAGTCTCAGAATTTTCTaGATTGAGCGAGCCTTTCCA +
Preference number: 5 (lower is better)
Translates to: RHIQLEIYTIALPNGAALSLRIF*IERAFP
Trigger: TGGAAAGGCTCGCTCAATCAAGAAAATTCTGAGACT...AAGTGCAGCTCCGTTTGGCAGTGCAATGGTATAAATTTCAAGCTGGATATGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp GGAACATGGCACACACTGGAGATTCCAGTCCAAGGACTTTGGAATGTCAACTTAAAAGGAAGCACTGAATaGCATCCTGTTTTTCAAAGA +
Preference number: 5 (lower is better)
Translates to: GTWHTLEIPVQGLWNVNLKGSTE*HPVFQR
Trigger: TCTTTGAAAAACAGGATGCAATTCAGTGCTTCCTTT...TAAGTTGACATTCCAAAGTCCTTGGACTGGAATCTCCAGTGTGTGCCATGTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR CAA 90 bp CACAATGCCTTATTCAGACCTAGGAATAAATCCACACTCCACTCTACAGCCAATAACCTCAGATACCTGTaGACCACAAAGATAGGTCTA +
Preference number: 5 (lower is better)
Translates to: HNALFRPRNKSTLHSTANNLRYL*TTKIGL
Trigger: TAGACCTATCTTTGTGGTCAACAGGTATCTGAGGTT...ATTGGCTGTAGAGTGGAGTGTGGATTTATTCCTAGGTCTGAATAAGGCATTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR CAA 90 bp CTTAAACAGCCTGCAGCTTTGTTTCATGGTACATCACTGACAATGCATATTATTTTTATTGGATGTGCTTaGCATTCTTGGACGAGGGGG +
Preference number: 5 (lower is better)
Translates to: LKQPAALFHGTSLTMHIIFIGCA*HSWTRG
Trigger: CCCCCTCGTCCAAGAATGCAAAGCACATCCAATAAA...AATAATATGCATTGTCAGTGATGTACCATGAAACAAAGCTGCAGGCTGTTTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333681.5
ENST00000398117.1
CDS-3UTR CAA 90 bp CAGCCTGCAGCTTTGTTTCATGGTACATCACTGACAATGCATATTATTTCTACTAAACAGCCTGCAGCTTaGTTTCATGGTACATCACTG +
Preference number: 5 (lower is better)
Translates to: QPAALFHGTSLTMHIISTKQPAA*FHGTSL
Trigger: CAGTGATGTACCATGAAACAAAGCTGCAGGCTGTTT...AGTAGAAATAATATGCATTGTCAGTGATGTACCATGAAACAAAGCTGCAGGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000590515.1
ENST00000677227.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp AGACATATCCAGCTTGAAATTTATACCATTGCACTGCCAAACGGAGCTGCACTTGATAGCAGCACAGGATaGGATATTCCATATTCATCA +
Preference number: 5 (lower is better)
Translates to: RHIQLEIYTIALPNGAALDSSTG*DIPYSS
Trigger: TGATGAATATGGAATATCCAATCCTGTGCTGCTATC...AAGTGCAGCTCCGTTTGGCAGTGCAATGGTATAAATTTCAAGCTGGATATGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp GCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGATGGGACTGTCTTAAATAGTCTCAGAATTTTCTaGATTGAGCGAGCCTTTCCA +
Preference number: 5 (lower is better)
Translates to: AISGRISKDRSFDGTVLNSLRIF*IERAFP
Trigger: TGGAAAGGCTCGCTCAATCAAGAAAATTCTGAGACT...ATTTAAGACAGTCCCATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp CAGCCTGCAGCTTTGTTTCATGGTACATCACTGACAATGCATATTATTTCTACTAATCCACTGTCACTCTaGCAAATTCTACCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: QPAALFHGTSLTMHIISTNPLSL*QILPWR
Trigger: CCTCCAAGGTAGAATTTGCAAGAGTGACAGTGGATT...AGTAGAAATAATATGCATTGTCAGTGATGTACCATGAAACAAAGCTGCAGGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp GCAATTAGTGGTCGGATTTCCAAAGACAGGAGTTTTGATGGGACTGTCTTAAATTTTATGTGTACAGTGTaGCAGAATATCAGCCACCTC +
Preference number: 5 (lower is better)
Translates to: AISGRISKDRSFDGTVLNFMCTV*QNISHL
Trigger: GAGGTGGCTGATATTCTGCAACACTGTACACATAAA...ATTTAAGACAGTCCCATCAAAACTCCTGTCTTTGGAAATCCGACCACTAATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp CCAGAAACAATCACACCACAGCACATGACTGAAAACTCTATGAGAAATAGTGTGGGAAAATTTTACCGATaGATGATGCCCTTGGTCTTC +
Preference number: 5 (lower is better)
Translates to: PETITPQHMTENSMRNSVGKFYR*MMPLVF
Trigger: GAAGACCAAGGGCATCATCAATCGGTAAAATTTTCC...CACACTATTTCTCATAGAGTTTTCAGTCATGTGCTGTGGTGTGATTGTTTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR CAA 90 bp ACAGCCTGCAGCTTTGTTTCATGGTACATCACTGACAATGCATATTATTTCTACTTGAAATTTATACCATaGCACTGCCAAACGGAGCTG +
Preference number: 5 (lower is better)
Translates to: TACSFVSWYITDNAYYFYLKFIP*HCQTEL
Trigger: CAGCTCCGTTTGGCAGTGCAATGGTATAAATTTCAA...GTAGAAATAATATGCATTGTCAGTGATGTACCATGAAACAAAGCTGCAGGCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp AATGCAATCCACTGTCACTCTTGCAAATTCTACCTTGGAGGGAAAAACTTAATGTTGAAATTTATACCATaGCACTGCCAAACGGAGCTG +
Preference number: 5 (lower is better)
Translates to: NAIHCHSCKFYLGGKNLMLKFIP*HCQTEL
Trigger: CAGCTCCGTTTGGCAGTGCAATGGTATAAATTTCAA...CATTAAGTTTTTCCCTCCAAGGTAGAATTTGCAAGAGTGACAGTGGATTGCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp ATAGCTGATTCGACGTTTTGCCTGAAGACTGTTAATTGTTGTGTGTGTGTGTGTTGCAGAACAACCTTGTaGTTGATAGGATGTTTGCTT +
Preference number: 5 (lower is better)
Translates to: IADSTFCLKTVNCCVCVCCRTTL*LIGCLL
Trigger: AAGCAAACATCCTATCAACAACAAGGTTGTTCTGCA...ACACACACACACACAACAATTAACAGTCTTCAGGCAAAACGTCGAATCAGCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp CCAGAAACAATCACACCACAGCACATGACTGAAAACTCTATGAGAAATAGTGTGGAAAGGAAAAACTGCTaGCTGACTAATGAAAAGGCA +
Preference number: 5 (lower is better)
Translates to: PETITPQHMTENSMRNSVERKNC*LTNEKA
Trigger: TGCCTTTTCATTAGTCAGCAAGCAGTTTTTCCTTTC...CACACTATTTCTCATAGAGTTTTCAGTCATGTGCTGTGGTGTGATTGTTTCTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR CAA 90 bp CCAGAAACAATCACACCACAGCACATGACTGAAAACTCTATGAGAAATAGTGTGTTTAATCCTATCGTCTaGCTGCCAAAATTGGCCATA +
Preference number: 5 (lower is better)
Translates to: PETITPQHMTENSMRNSVFNPIV*LPKLAI
Trigger: TATGGCCAATTTTGGCAGCAAGACGATAGGATTAAA...CACACTATTTCTCATAGAGTTTTCAGTCATGTGCTGTGGTGTGATTGTTTCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR CAA 90 bp GGGTGCGTATCCAAAATATATGAATATACACAATCAGGGCTTAAGGTACTGGATAGACTGAAAGGATGTTaGGGGAGTGAGGAAGTAATA +
Preference number: 5 (lower is better)
Translates to: GCVSKIYEYTQSGLKVLDRLKGC*GSEEVI
Trigger: TATTACTTCCTCACTCCCCAAACATCCTTTCAGTCT...ATCCAGTACCTTAAGCCCTGATTGTGTATATTCATATATTTTGGATACGCACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678301.1
CDS-3UTR CAA 90 bp AAACATGCATGTAATCCTGAATACCATGAATTAAATGCGGAATTGCCCAGGGACCCAGTTATAGCTGATTaGAAACTTCCCAATGAATCA +
Preference number: 5 (lower is better)
Translates to: KHACNPEYHELNAELPRDPVIAD*KLPNES
Trigger: TGATTCATTGGGAAGTTTCAAATCAGCTATAACTGG...GTCCCTGGGCAATTCCGCATTTAATTCATGGTATTCAGGATTACATGCATGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333681.5
ENST00000398117.1
CDS-3UTR CAA 90 bp GGGTGCGTATCCAAAATATATGAATATACACAATCAGGGCTTAAGGTACTGGATGATAGCAGCACAGGATaGGATATTCCATATTCATCA +
Preference number: 5 (lower is better)
Translates to: GCVSKIYEYTQSGLKVLDDSSTG*DIPYSS
Trigger: TGATGAATATGGAATATCCAATCCTGTGCTGCTATC...ATCCAGTACCTTAAGCCCTGATTGTGTATATTCATATATTTTGGATACGCACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp ATGGAACAGAATGATTCACTGGGTAAGACTAAAGGACTTGTATTATCACTCTCCTGCAGAACAACCTTGTaGTTGATAGGATGTTTGCTT +
Preference number: 5 (lower is better)
Translates to: MEQNDSLGKTKGLVLSLSCRTTL*LIGCLL
Trigger: AAGCAAACATCCTATCAACAACAAGGTTGTTCTGCA...GGAGAGTGATAATACAAGTCCTTTAGTCTTACCCAGTGAATCATTCTGTTCCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp TTTCCAAAAGGTTTAGGTGCATGGATTTACTCAGTATCTACACTACAGTCTTATAATCCACTGTCACTCTaGCAAATTCTACCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: FPKGLGAWIYSVSTLQSYNPLSL*QILPWR
Trigger: CCTCCAAGGTAGAATTTGCAAGAGTGACAGTGGATT...ATAAGACTGTAGTGTAGATACTGAGTAAATCCATGCACCTAAACCTTTTGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp CCAGAAACAATCACACCACAGCACATGACTGAAAACTCTATGAGAAATAGTGTGATCTCCTACAATCTCTaGTCTGAATCATCTCATTCT +
Preference number: 5 (lower is better)
Translates to: PETITPQHMTENSMRNSVISYNL*SESSHS
Trigger: AGAATGAGATGATTCAGACAAGAGATTGTAGGAGAT...CACACTATTTCTCATAGAGTTTTCAGTCATGTGCTGTGGTGTGATTGTTTCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR CAA 90 bp CTGTCACTCTTGCAAATTCTACCTTGGAGGGAAAAACTTAATGAAATGAGCTATCAAAATGTTTCTCATTaGTCACACAAGGTTCTTCGC +
Preference number: 5 (lower is better)
Translates to: LSLLQILPWREKLNEMSYQNVSH*SHKVLR
Trigger: GCGAAGAACCTTGTGTGACAAATGAGAAACATTTTG...ATAGCTCATTTCATTAAGTTTTTCCCTCCAAGGTAGAATTTGCAAGAGTGACAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp CTTAAACAGCCTGCAGCTTTGTTTCATGGTACATCACTGACAATGCATATTATTCAAAATGTTTCTCATTaGTCACACAAGGTTCTTCGC +
Preference number: 5 (lower is better)
Translates to: LKQPAALFHGTSLTMHIIQNVSH*SHKVLR
Trigger: GCGAAGAACCTTGTGTGACAAATGAGAAACATTTTG...AATAATATGCATTGTCAGTGATGTACCATGAAACAAAGCTGCAGGCTGTTTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp AATGATTTTGGCAGGATAGCAGCACAGGATTGGATATTCCATATTCATCACTTTTGCAGAACAACCTTGTaGTTGATAGGATGTTTGCTT +
Preference number: 5 (lower is better)
Translates to: NDFGRIAAQDWIFHIHHFCRTTL*LIGCLL
Trigger: AAGCAAACATCCTATCAACAACAAGGTTGTTCTGCA...AAAGTGATGAATATGGAATATCCAATCCTGTGCTGCTATCCTGCCAAAATCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp TCTCACAAATGTTCTTCAAAGCCACAGGTATCAATCACTTCAACTAAAGTAAGGAGAAAAAGAAATGACTaGCAGTCTAAAGCCTGGAGT +
Preference number: 5 (lower is better)
Translates to: SHKCSSKPQVSITSTKVRRKRND*QSKAWS
Trigger: ACTCCAGGCTTTAGACTGCAAGTCATTTCTTTTTCT...CCTTACTTTAGTTGAAGTGATTGATACCTGTGGCTTTGAAGAACATTTGTGAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR CAA 90 bp TATGGAACACAAAAGTCAAACAGATTTCCTCAGCCTCACAAGGTTCCAATTTTCCAGTTCAATCAAAGATaGCTAAAAAGGGCAATCCAT +
Preference number: 5 (lower is better)
Translates to: YGTQKSNRFPQPHKVPIFQFNQR*LKRAIH
Trigger: ATGGATTGCCCTTTTTAGCAATCTTTGATTGAACTG...GAAAATTGGAACCTTGTGAGGCTGAGGAAATCTGTTTGACTTTTGTGTTCCATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000589955.2
CDS-3UTR CAA 90 bp CTGTCACTCTTGCAAATTCTACCTTGGAGGGAAAAACTTAATGAAATGAGCTATCCAGTTATAGCTGATTaGAAACTTCCCAATGAATCA +
Preference number: 5 (lower is better)
Translates to: LSLLQILPWREKLNEMSYPVIAD*KLPNES
Trigger: TGATTCATTGGGAAGTTTCAAATCAGCTATAACTGG...ATAGCTCATTTCATTAAGTTTTTCCCTCCAAGGTAGAATTTGCAAGAGTGACAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333681.5
ENST00000398117.1
CDS-3UTR CAA 90 bp ATGCATATTATTTCTACTGCTTTAGTGAACCTTTTGCATATTTGTTTGGGGCAGCTCTGTGAATCCCGTTaGAACAACAACAAAAGACAA +
Preference number: 5 (lower is better)
Translates to: MHIISTALVNLLHICLGQLCESR*NNNKRQ
Trigger: TTGTCTTTTGTTGTTGTTCAAACGGGATTCACAGAG...CTGCCCCAAACAAATATGCAAAAGGTTCACTAAAGCAGTAGAAATAATATGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS-3UTR CAA 90 bp TTTCCAAAAGGTTTAGGTGCATGGATTTACTCAGTATCTACACTACAGTCTTATCAAAATGTTTCTCATTaGTCACACAAGGTTCTTCGC +
Preference number: 5 (lower is better)
Translates to: FPKGLGAWIYSVSTLQSYQNVSH*SHKVLR
Trigger: GCGAAGAACCTTGTGTGACAAATGAGAAACATTTTG...ATAAGACTGTAGTGTAGATACTGAGTAAATCCATGCACCTAAACCTTTTGGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000678134.1
ENST00000678301.1
ENST00000678349.1
CDS CCA 72 bp TCCCGGGATGCGGCTGGATGGGGCGTGTGCCCGGGCTaGGAGGAGAAGATGCCCGGTGCGGGGGCGGCCCCC +
Preference number: 6 (lower is better)
Translates to: SRDAAGWGVCPG*EEKMPGAGAAP
Trigger: GGGGGCCGCCCCCGCACCGGGCATCTTCTCCTCCCAGCCCGGGCACACGCCCCATCCAGCCGCATCCCGGGA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000589955.2
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS GCA 72 bp TCCGCTGCACCCCACCGGCGCACCCCGCCTCCGGGCTaGGCACCCTTTCTCCTCCTCCTGGTCCTGCGCGGC +
Preference number: 6 (lower is better)
Translates to: SAAPHRRTPPPG*APFLLLLVLRG
Trigger: GCCGCGCAGGACCAGGAGGAGGAGAAAGGGTGCGCAGCCCGGAGGCGGGGTGCGCCGGTGGGGTGCAGCGGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398117.1
CDS CCA 72 bp CGGGAGAAGTCGTCGCCGGCCTGGCGGAGGGTCAGGTaGACCACAGGTGGCACCGGGCTGAGCGCAGGCCCC +
Preference number: 6 (lower is better)
Translates to: REKSSPAWRRVR*TTGGTGLSAGP
Trigger: GGGGCCTGCGCTCAGCCCGGTGCCACCTGTGGTCCACCTGACCCTCCGCCAGGCCGGCGACGACTTCTCCCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000589955.2
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS GCA 72 bp GTGGCAAAGCGTCCCCGCGCGGTGAAGGGCGTCAGGTaGAGCTGGCTGGACATCTCGGCGAAGTCGCGGCGG +
Preference number: 6 (lower is better)
Translates to: VAKRPRAVKGVR*SWLDISAKSRR
Trigger: CCGCCGCGACTTCGCCGAGATGTCCAGCCAGCTGCACCTGACGCCCTTCACCGCGCGGGGACGCTTTGCCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000589955.2
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS TCA 72 bp GCTCCTCCACCACCGTGGCAAAGCGTCCCCGCGCGGTaGAGGGCGTCAGGTGCAGCTGGCTGGACATCTCGG +
Preference number: 6 (lower is better)
Translates to: APPPPWQSVPAR*RASGAAGWTSR
Trigger: CCGAGATGTCCAGCCAGCTGCACCTGACGCCCTTCACCGCGCGGGGACGCTTTGCCACGGTGGTGGAGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000589955.2
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS GCA 72 bp TGGATAAATGAAGGCAGGACGCGCCTGGCCCGCCGGTaGCGAGCGCTAGAAGCCCGCGCTGTGTGTGGTGCG +
Preference number: 6 (lower is better)
Translates to: WINEGRTRLARR*RALEARAVCGA
Trigger: CGCACCACACACAGCGCGGGCTTCTAGCGCTCGGCACCGGCGGGCCAGGCGCGTCCTGCCTTCATTTATCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333681.5
ENST00000398117.1
CDS CCA 72 bp GCCCACCCGCACTCCAACCCCCGCATCTCGGACCTGTaGCCTCAGCCCAGACTCACATCACCAAGTGCACCT +
Preference number: 6 (lower is better)
Translates to: AHPHSNPRISDL*PQPRLTSPSAP
Trigger: AGGTGCACTTGGTGATGTGAGTCTGGGCTGAGGCCACAGGTCCGAGATGCGGGGGTTGGAGTGCGGGTGGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000589955.2
ENST00000678349.1
CDS CAA 90 bp GTGTGCAGGTGCCGGTTCAGGTACTCAGTCATCCACAGGGCGATGTaGTCCACCAGGGGCGACATCTCCCGGTTGACGCTCTCCACACAC +
Preference number: 6 (lower is better)
Translates to: VCRCRFRYSVIHRAM*STRGDISRLTLSTH
Trigger: GTGTGTGGAGAGCGTCAACCGGGAGATGTCGCCCCTGGTGGACAACATCGCCCTGTGGATGACTGAGTACCTGAACCGGCACCTGCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000589955.2
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS CAA 72 bp AGGGCGATGTTGTCCACCAGGGGCGACATCTCCCGGTaGACGCTCTCCACACACATGACCCCACCGAACTCA +
Preference number: 6 (lower is better)
Translates to: RAMLSTRGDISR*TLSTHMTPPNS
Trigger: TGAGTTCGGTGGGGTCATGTGTGTGGAGAGCGTCAACCGGGAGATGTCGCCCCTGGTGGACAACATCGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000589955.2
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS CAA 72 bp TGCCGGTTCAGGTACTCAGTCATCCACAGGGCGATGTaGTCCACCAGGGGCGACATCTCCCGGTTGACGCTC +
Preference number: 6 (lower is better)
Translates to: CRFRYSVIHRAM*STRGDISRLTL
Trigger: GAGCGTCAACCGGGAGATGTCGCCCCTGGTGGACAACATCGCCCTGTGGATGACTGAGTACCTGAACCGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000589955.2
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS CAA 90 bp GTCATCCACAGGGCGATGTTGTCCACCAGGGGCGACATCTCCCGGTaGACGCTCTCCACACACATGACCCCACCGAACTCAAAGAAGGCC +
Preference number: 6 (lower is better)
Translates to: VIHRAMLSTRGDISR*TLSTHMTPPNSKKA
Trigger: GGCCTTCTTTGAGTTCGGTGGGGTCATGTGTGTGGAGAGCGTCAACCGGGAGATGTCGCCCCTGGTGGACAACATCGCCCTGTGGATGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000589955.2
ENST00000677227.1
ENST00000678134.1
ENST00000678349.1
CDS GCA 72 bp ACTATCTCCCGGTTATCGTACCCTGTTCTCCCAGCGTaGGCCATCCTTCCCAGAGGAAAAGCAACGGGGGCC +
Preference number: 6 (lower is better)
Translates to: TISRLSYPVLPA*AILPRGKATGA
Trigger: GGCCCCCGTTGCTTTTCCTCTGGGAAGGATGGCGCACGCTGGGAGAACAGGGTACGATAACCGGGAGATAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000589955.2
CDS TCA 72 bp ACAGCAAATGCATTTTCCGAAAAGCTGCTGGATAAATaGAGGCAGGACGCGCCTGGCCCGCCGGTGCCGAGC +
Preference number: 6 (lower is better)
Translates to: TANAFSEKLLDK*RQDAPGPPVPS
Trigger: GCTCGGCACCGGCGGGCCAGGCGCGTCCTGCCTTCATTTATCCAGCAGCTTTTCGGAAAATGCATTTGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333681.5
ENST00000398117.1
CDS TCA 72 bp AGGCATCCTGGCCTGGAACCCTGGGATTCATTTGATTaGGGAGGGTCACAAGCTGTACCCCAGAGGCTCGGG +
Preference number: 6 (lower is better)
Translates to: RHPGLEPWDSFD*GGSQAVPQRLG
Trigger: CCCGAGCCTCTGGGGTACAGCTTGTGACCCTCCTCAATCAAATGAATCCCAGGGTTCCAGGCCAGGATGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678301.1
CDS CAA 90 bp GTACAGTTCCACAAAGGCATCCTGGCCTGGAACCCTGGGATTCATTaGATTGAGGAGGGTCACAAGCTGTACCCCAGAGGCTCGGGAGGC +
Preference number: 6 (lower is better)
Translates to: VQFHKGILAWNPGIH*IEEGHKLYPRGSGG
Trigger: GCCTCCCGAGCCTCTGGGGTACAGCTTGTGACCCTCCTCAATCAAATGAATCCCAGGGTTCCAGGCCAGGATGCCTTTGTGGAACTGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678301.1
CDS TCA 72 bp CGGCTCGGCAGGATTTCCTCCACAGCCACATTGTGCTaGATGAGTCTAGAGGGTTCCGTCTGCAGAGCAGTG +
Preference number: 6 (lower is better)
Translates to: RLGRISSTATLC*MSLEGSVCRAV
Trigger: CACTGCTCTGCAGACGGAACCCTCTAGACTCATTCAGCACAATGTGGCTGTGGAGGAAATCCTGCCGAGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677635.1
CDS CCA 72 bp AACTCCGAACAGCAAATGCATTTTCCGAAAAGCTGCTaGATAAATGAAGGCAGGACGCGCCTGGCCCGCCGG +
Preference number: 6 (lower is better)
Translates to: NSEQQMHFPKSC*INEGRTRLARR
Trigger: CCGGCGGGCCAGGCGCGTCCTGCCTTCATTTATCCAGCAGCTTTTCGGAAAATGCATTTGCTGTTCGGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333681.5
ENST00000398117.1
CDS CCA 72 bp TACAGTTCCACAAAGGCATCCCAGCCTCCGTTATCCTaGATCCAGGTGTGCAGGTGCCGGTTCAGGTACTCA +
Preference number: 6 (lower is better)
Translates to: YSSTKASQPPLS*IQVCRCRFRYS
Trigger: TGAGTACCTGAACCGGCACCTGCACACCTGGATCCAGGATAACGGAGGCTGGGATGCCTTTGTGGAACTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333681.5
ENST00000398117.1
CDS CAA 72 bp CACAAAGGCATCCTGGCCTGGAACCCTGGGATTCATTaGATTGAGGAGGGTCACAAGCTGTACCCCAGAGGC +
Preference number: 6 (lower is better)
Translates to: HKGILAWNPGIH*IEEGHKLYPRG
Trigger: GCCTCTGGGGTACAGCTTGTGACCCTCCTCAATCAAATGAATCCCAGGGTTCCAGGCCAGGATGCCTTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678301.1
CDS TCA 72 bp ACAAAGGCATCCTGGCCTGGAACCCTGGGATTCATTTaGTTGAGGAGGGTCACAAGCTGTACCCCAGAGGCT +
Preference number: 6 (lower is better)
Translates to: TKASWPGTLGFI*LRRVTSCTPEA
Trigger: AGCCTCTGGGGTACAGCTTGTGACCCTCCTCAATCAAATGAATCCCAGGGTTCCAGGCCAGGATGCCTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678301.1
CDS CAA 72 bp CTTGGACGAGGGGGTGTCTTCAATCACGCGGAACACTaGATTCTGGTGTTTCCCCCTTGGCATGAGATGCAG +
Preference number: 6 (lower is better)
Translates to: LGRGGVFNHAEH*ILVFPPWHEMQ
Trigger: CTGCATCTCATGCCAAGGGGGAAACACCAGAATCAAGTGTTCCGCGTGATTGAAGACACCCCCTCGTCCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000333681.5
ENST00000398117.1
CDS GCA 72 bp TTAAACTCCGAACAGCAAATGCATTTTCCGAAAAGCTaGTGGATAAATGAAGGCAGGACGCGCCTGGCCCGC +
Preference number: 6 (lower is better)
Translates to: LNSEQQMHFPKS*WINEGRTRLAR
Trigger: GCGGGCCAGGCGCGTCCTGCCTTCATTTATCCAGCAGCTTTTCGGAAAATGCATTTGCTGTTCGGAGTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333681.5
ENST00000398117.1
CDS CAA 90 bp CTTTGCATTCTTGGACGAGGGGGTGTCTTCAATCACGCGGAACACTaGATTCTGGTGTTTCCCCCTTGGCATGAGATGCAGGAAATTTTT +
Preference number: 6 (lower is better)
Translates to: LCILGRGGVFNHAEH*ILVFPPWHEMQEIF
Trigger: AAAAATTTCCTGCATCTCATGCCAAGGGGGAAACACCAGAATCAAGTGTTCCGCGTGATTGAAGACACCCCCTCGTCCAAGAATGCAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000333681.5
ENST00000398117.1
CDS TCA 72 bp GACATCATGCTTAGTGTAACAAGCCAGTCACAAGTGTaGGTCCACTTATGCGAGGTACCTAGAGTAGTCAAG +
Preference number: 6 (lower is better)
Translates to: DIMLSVTSQSQV*VHLCEVPRVVK
Trigger: CTTGACTACTCTAGGTACCTCGCATAAGTGGACTCACACTTGTGACTGGCTTGTTACACTAAGCATGATGTC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677227.1
CDS GCA 72 bp AAATTAGGAGGATTTCCAGATCGATTCCCAGACTTCTaGTTCACAGAAATGTCAATCCGCAGGAATCCCAAC +
Preference number: 6 (lower is better)
Translates to: KLGGFPDRFPDF*FTEMSIRRNPN
Trigger: GTTGGGATTCCTGCGGATTGACATTTCTGTGAAGCAGAAGTCTGGGAATCGATCTGGAAATCCTCCTAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333681.5
ENST00000398117.1
CDS CCA 72 bp AATCACGCGGAACACTTGATTCTGGTGTTTCCCCCTTaGCATGAGATGCAGGAAATTTTTATTCCAATTCCT +
Preference number: 6 (lower is better)
Translates to: NHAEHLILVFPP*HEMQEIFIPIP
Trigger: AGGAATTGGAATAAAAATTTCCTGCATCTCATGCCAAGGGGGAAACACCAGAATCAAGTGTTCCGCGTGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000333681.5
ENST00000398117.1
CDS CAA 72 bp CAGAGAAAGAAGAGGAGTTATAATCCAGCTATTTTATaGGATGTGCTTTGCATTCTTGGACGAGGGGGTGTC +
Preference number: 6 (lower is better)
Translates to: QRKKRSYNPAIL*DVLCILGRGGV
Trigger: GACACCCCCTCGTCCAAGAATGCAAAGCACATCCAATAAAATAGCTGGATTATAACTCCTCTTCTTTCTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333681.5
ENST00000398117.1
ENST00000589955.2
CDS CCA 72 bp TTCAAAATGAAGGAAGCTGTGACACAGGCCAAAACATaGATGAACCTTGAAGACATCATGCTTAGTGTAACA +
Preference number: 6 (lower is better)
Translates to: FKMKEAVTQAKT*MNLEDIMLSVT
Trigger: TGTTACACTAAGCATGATGTCTTCAAGGTTCATCCATGTTTTGGCCTGTGTCACAGCTTCCTTCATTTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677227.1