RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BCAS1 (Homo sapiens)

Ensembl gene IDs: ENSG00000064787

Ensembl transcript IDs: ENST00000371435.6, ENST00000395961.7, ENST00000422805.1, ENST00000448484.5

Found 790 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTTACTGCTGTGGGTGACGGGTGGCTCGGTCTTGCTGAGGACCCTTaGGAGAACACAAAGACGACCCCTCAACATTGTCCCACTGAGAGA +
Preference number: 1 (lower is better)
Translates to: VTAVGDGWLGLAEDP*ENTKTTPQHCPTER
Trigger: TCTCTCAGTGGGACAATGTTGAGGGGTCGTCTTTGTGTTCTCTCAAGGGTCCTCAGCAAGACCGAGCCACCCGTCACCCACAGCAGTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR GCA 90 bp TCGGGTAGTCTGAAGACGATGGGGCAGGGCAGCCACAGCACCTACTaGCATGGCGACTTGGCCACCGTTATAAGTAGATGCAACTGTACA +
Preference number: 1 (lower is better)
Translates to: SGSLKTMGQGSHSTY*HGDLATVISRCNCT
Trigger: TGTACAGTTGCATCTACTTATAACGGTGGCCAAGTCGCCATGGCAGTAGGTGCTGTGGCTGCCCTGCCCCATCGTCTTCAGACTACCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR CCA 90 bp CCCTGGAGAAAGCCACCGAGAGGAAAAGCAAAGAACGAGGAGTTTTaGGGTGGGAAGCTGTCAGTGCTGCAGGTAAACTCGGGTAGTCTG +
Preference number: 1 (lower is better)
Translates to: PWRKPPRGKAKNEEF*GGKLSVLQVNSGSL
Trigger: CAGACTACCCGAGTTTACCTGCAGCACTGACAGCTTCCCACCCCAAAACTCCTCGTTCTTTGCTTTTCCTCTCGGTGGCTTTCTCCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR CCA 90 bp CACAGTCTCACTTCAGCCATGCTAAGCTACCTGCCATTCTCTCTGTaGACCCTGGGCTCTTGCACTTGCTGTTCTTCTGGGAGCCCTTTT +
Preference number: 1 (lower is better)
Translates to: HSLTSAMLSYLPFSL*TLGSCTCCSSGSPF
Trigger: AAAAGGGCTCCCAGAAGAACAGCAAGTGCAAGAGCCCAGGGTCCACAGAGAGAATGGCAGGTAGCTTAGCATGGCTGAAGTGAGACTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR GCA 90 bp CCTAAGTGCTTACAATGTGCCAGCCACTGCACTAAATGTTTGGTATaGACCATCTCACTGCATGCTGGCAGCAACTCCACGAGTAGGCTC +
Preference number: 1 (lower is better)
Translates to: PKCLQCASHCTKCLV*TISLHAGSNSTSRL
Trigger: GAGCCTACTCGTGGAGTTGCTGCCAGCATGCAGTGAGATGGTGCATACCAAACATTTAGTGCAGTGGCTGGCACATTGTAAGCACTTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR TCA 90 bp CTGTTCTATCTCAGGCTGAGGTCATCTGCATCCTCATCAATAAGCTaGCTGAGCACTCATTACCTGCCAGACACGGTGCCTACATGCTCT +
Preference number: 1 (lower is better)
Translates to: LFYLRLRSSASSSIS*LSTHYLPDTVPTCS
Trigger: AGAGCATGTAGGCACCGTGTCTGGCAGGTAATGAGTGCTCAGTCAGCTTATTGATGAGGATGCAGATGACCTCAGCCTGAGATAGAACAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR TCA 90 bp TCCCCTTGCCTGGAACTGCATCCATCATTCAGCACAGTTTTAGGATaGAGTCAACCCATGGAACATGGCAGAATGGAGTGTCAGAGAACC +
Preference number: 1 (lower is better)
Translates to: SPCLELHPSFSTVLG*SQPMEHGRMECQRT
Trigger: GGTTCTCTGACACTCCATTCTGCCATGTTCCATGGGTTGACTTCATCCTAAAACTGTGCTGAATGATGGATGCAGTTCCAGGCAAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR GCA 90 bp CTCGTTACTATGGACTTTTTACTCCAAGTCCTTGAGATCCATCTGTaGCACCTCCCCAGCTTCCATCCTCTTATCCGTTCTCCTCACAGT +
Preference number: 1 (lower is better)
Translates to: LVTMDFLLQVLEIHL*HLPSFHPLIRSPHS
Trigger: ACTGTGAGGAGAACGGATAAGAGGATGGAAGCTGGGGAGGTGGCACAGATGGATCTCAAGGACTTGGAGTAAAAAGTCCATAGTAACGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR CCA 90 bp AATTCTTTTATGGTTACCAGTCAAAAAGTCACCGTCAGCTGGAACTaGAAGGGAGGTGTGTGTGTGTGTGTGTGTGTGCGCGTGTGTGTG +
Preference number: 1 (lower is better)
Translates to: NSFMVTSQKVTVSWN*KGGVCVCVCVRVCV
Trigger: CACACACACGCGCACACACACACACACACACACACCTCCCTTCCAGTTCCAGCTGACGGTGACTTTTTGACTGGTAACCATAAAAGAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR CCA 90 bp CCTTTCCTAAGTGCTTACAATGTGCCAGCCACTGCACTAAATGTTTaGTATGCACCATCTCACTGCATGCTGGCAGCAACTCCACGAGTA +
Preference number: 1 (lower is better)
Translates to: PFLSAYNVPATALNV*YAPSHCMLAATPRV
Trigger: TACTCGTGGAGTTGCTGCCAGCATGCAGTGAGATGGTGCATACCAAACATTTAGTGCAGTGGCTGGCACATTGTAAGCACTTAGGAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR TCA 90 bp CTGCTTTGGAAGGTGGGGGCCGTCATTACACAAATCCCATGGGTGTaGATTGAAGGGACACAGTTAGTTTGGGGAATGGTTAGCCTTAAA +
Preference number: 1 (lower is better)
Translates to: LLWKVGAVITQIPWV*IEGTQLVWGMVSLK
Trigger: TTTAAGGCTAACCATTCCCCAAACTAACTGTGTCCCTTCAATTCACACCCATGGGATTTGTGTAATGACGGCCCCCACCTTCCAAAGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR TCA 90 bp ATCTTCAGGGCCAGTCTTTGGACCAAACATGCTGTTGATGCTCAGTaGAGTGGTAGCTCTACCTGGACCAGTGGTTTTCAAATTTTCTCC +
Preference number: 1 (lower is better)
Translates to: IFRASLWTKHAVDAQ*SGSSTWTSGFQIFS
Trigger: GGAGAAAATTTGAAAACCACTGGTCCAGGTAGAGCTACCACTTCACTGAGCATCAACAGCATGTTTGGTCCAAAGACTGGCCCTGAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR TCA 90 bp GCTCAAGACCTCACAGCCTGGGATCATGGGTATGAATCATCTGGGTaGATGATGAGGCCAAATCCCAAGTCCATGTTTATGACACTTAGA +
Preference number: 1 (lower is better)
Translates to: AQDLTAWDHGYESSG*MMRPNPKSMFMTLR
Trigger: TCTAAGTGTCATAAACATGGACTTGGGATTTGGCCTCATCATTCACCCAGATGATTCATACCCATGATCCCAGGCTGTGAGGTCTTGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR GCA 90 bp GTCTTGCGCCAGTGCCTTCCCCTGAGTCCCATGACACCCTGCATTTaGTTCTCTTACATTGTATTATTATTATCTTTTTGCCTGCCTGTC +
Preference number: 1 (lower is better)
Translates to: VLRQCLPLSPMTPCI*FSYIVLLLSFCLPV
Trigger: GACAGGCAGGCAAAAAGATAATAATAATACAATGTAAGAGAAGCAAATGCAGGGTGTCATGGGACTCAGGGGAAGGCACTGGCGCAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR CCA 90 bp TATGTGCCTCCTTCTCCAAGACAACGAATGCAGGAAGGACCTCACTaGCTGCTGGGAACAACTGCCCTTTTGAATGAATTCTTTTATGGT +
Preference number: 1 (lower is better)
Translates to: YVPPSPRQRMQEGPH*LLGTTALLNEFFYG
Trigger: ACCATAAAAGAATTCATTCAAAAGGGCAGTTGTTCCCAGCAGCCAGTGAGGTCCTTCCTGCATTCGTTGTCTTGGAGAAGGAGGCACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR TCA 90 bp GAAGAAGTAATTTGCTCAAGACCTCACAGCCTGGGATCATGGGTATaGATCATCTGGGTGAATGATGAGGCCAAATCCCAAGTCCATGTT +
Preference number: 1 (lower is better)
Translates to: EEVICSRPHSLGSWV*IIWVNDEAKSQVHV
Trigger: AACATGGACTTGGGATTTGGCCTCATCATTCACCCAGATGATTCATACCCATGATCCCAGGCTGTGAGGTCTTGAGCAAATTACTTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR GCA 90 bp TCCATGAAAGAGAACACATCTGTTCTATCTCAGGCTGAGGTCATCTaGATCCTCATCAATAAGCTGACTGAGCACTCATTACCTGCCAGA +
Preference number: 1 (lower is better)
Translates to: SMKENTSVLSQAEVI*ILINKLTEHSLPAR
Trigger: TCTGGCAGGTAATGAGTGCTCAGTCAGCTTATTGATGAGGATGCAGATGACCTCAGCCTGAGATAGAACAGATGTGTTCTCTTTCATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR CCA 90 bp ATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTaGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGA +
Preference number: 1 (lower is better)
Translates to: ISFAGHQKNIYMERV*GGDGVRRTHLGGRR
Trigger: TCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
3UTR TCA 90 bp TGTGGAGCAGGATGGGCCAGTAAGGATTACTTAAATGCATTGCAATaGCACCAACTGAAACGTTTTGCAATCACACAATCTTCCTTGAGC +
Preference number: 1 (lower is better)
Translates to: CGAGWASKDYLNALQ*HQLKRFAITQSSLS
Trigger: GCTCAAGGAAGATTGTGTGATTGCAAAACGTTTCAGTTGGTGTCATTGCAATGCATTTAAGTAATCCTTACTGGCCCATCCTGCTCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR TCA 90 bp GGGTTAAACTCCCCAGAAAACCAATTTATGCAAAGGGCTGGATCCTaGCCGGCATTCTGCACTAAAGATCTGAATTACAAATTTAGAGAA +
Preference number: 1 (lower is better)
Translates to: GLNSPENQFMQRAGS*PAFCTKDLNYKFRE
Trigger: TTCTCTAAATTTGTAATTCAGATCTTTAGTGCAGAATGCCGGTCAGGATCCAGCCCTTTGCATAAATTGGTTTTCTGGGGAGTTTAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR TCA 90 bp CCAACCTTATCTTCATTTGGAGGACTGAGAATCATAGAAGGCAACTaGCTTGCCCAGTTCAGCTTTCTCGTTCTAGTTCTCCTAATTAAA +
Preference number: 1 (lower is better)
Translates to: PTLSSFGGLRIIEGN*LAQFSFLVLVLLIK
Trigger: TTTAATTAGGAGAACTAGAACGAGAAAGCTGAACTGGGCAAGTCAGTTGCCTTCTATGATTCTCAGTCCTCCAAATGAAGATAAGGTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR TCA 90 bp TTGTATTATTATTATCTTTTTGCCTGCCTGTCTCTCCCACAGACATaGAAGCAAGCTTTTATGTACTTAGGTTGGATTTCAACCTTGGCT +
Preference number: 1 (lower is better)
Translates to: LYYYYLFACLSLPQT*KQAFMYLGWISTLA
Trigger: AGCCAAGGTTGAAATCCAACCTAAGTACATAAAAGCTTGCTTTCATGTCTGTGGGAGAGACAGGCAGGCAAAAAGATAATAATAATACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR-3UTR CCA 90 bp TTACTGCTGTGGGTGACGGGTGGCTCGGTCTTGCTGAGGACCCTTGAGAGAACAGTCACCTCCCCAAAGTaGCCAACCTCCACCCACTGT +
Preference number: 2 (lower is better)
Translates to: LLLWVTGGSVLLRTLERTVTSPK*PTSTHC
Trigger: ACAGTGGGTGGAGGTTGGCCACTTTGGGGAGGTGAC...TGTTCTCTCAAGGGTCCTCAGCAAGACCGAGCCACCCGTCACCCACAGCAGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR-3UTR GCA 90 bp TTACTGCTGTGGGTGACGGGTGGCTCGGTCTTGCTGAGGACCCTTGAGAGAACACTGGGCTCTTGCACTTaGTGTTCTTCTGGGAGCCCT +
Preference number: 2 (lower is better)
Translates to: LLLWVTGGSVLLRTLERTLGSCT*CSSGSP
Trigger: AGGGCTCCCAGAAGAACAGCAAGTGCAAGAGCCCAG...TGTTCTCTCAAGGGTCCTCAGCAAGACCGAGCCACCCGTCACCCACAGCAGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR-3UTR CCA 90 bp TTACTGCTGTGGGTGACGGGTGGCTCGGTCTTGCTGAGGACCCTTGAGAGAACACTAGTGGCACTGCTTTaGAAGGTGGGGGCCGTCATT +
Preference number: 2 (lower is better)
Translates to: LLLWVTGGSVLLRTLERTLVALL*KVGAVI
Trigger: AATGACGGCCCCCACCTTCCAAAGCAGTGCCACTAG...TGTTCTCTCAAGGGTCCTCAGCAAGACCGAGCCACCCGTCACCCACAGCAGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR-3UTR CCA 90 bp TGGCACTGCTTTGGAAGGTGGGGGCCGTCATTACACAAATCCCATGGGTGTGAACAGGAAGGACCTCACTaGCTGCTGGGAACAACTGCC +
Preference number: 2 (lower is better)
Translates to: WHCFGRWGPSLHKSHGCEQEGPH*LLGTTA
Trigger: GGCAGTTGTTCCCAGCAGCCAGTGAGGTCCTTCCTG...TTCACACCCATGGGATTTGTGTAATGACGGCCCCCACCTTCCAAAGCAGTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR CAA 90 bp AAGACGATGGGGCAGGGCAGCCACAGCACCTACTGCCATGGCGACTaGGCCACCGTTATAAGTAGATGCAACTGTACAACCAAGGATAGC +
Preference number: 2 (lower is better)
Translates to: KTMGQGSHSTYCHGD*ATVISRCNCTTKDS
Trigger: GCTATCCTTGGTTGTACAGTTGCATCTACTTATAACGGTGGCCAAGTCGCCATGGCAGTAGGTGCTGTGGCTGCCCTGCCCCATCGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR-3UTR GCA 90 bp AAATTGGCAACCACCCAACACAGCCCGGGTTCTCCCTCCTTGAGATGTGAATTTGCAACTTCGGCTCACTaGAACCTCCACCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: KLATTQHSPGSPSLRCEFATSAH*NLHLLG
Trigger: ACCCAGGAGGTGGAGGTTGCAGTGAGCCGAAGTTGC...AAATTCACATCTCAAGGAGGGAGAACCCGGGCTGTGTTGGGTGGTTGCCAATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
3UTR-3UTR GCA 90 bp TTACTGCTGTGGGTGACGGGTGGCTCGGTCTTGCTGAGGACCCTTGAGAGAACAGGAGATGGAGAGGGTTaGGTGAATGCCATTCAAGAA +
Preference number: 2 (lower is better)
Translates to: LLLWVTGGSVLLRTLERTGDGEG*VNAIQE
Trigger: TTCTTGAATGGCATTCACGCAACCCTCTCCATCTCC...TGTTCTCTCAAGGGTCCTCAGCAAGACCGAGCCACCCGTCACCCACAGCAGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR-3UTR TCA 90 bp TTACTGCTGTGGGTGACGGGTGGCTCGGTCTTGCTGAGGACCCTTGAGAGAACATTATTAGCCCATTGTTaGGGGAGGACACTCAGAGTT +
Preference number: 2 (lower is better)
Translates to: LLLWVTGGSVLLRTLERTLLAHC*GRTLRV
Trigger: AACTCTGAGTGTCCTCCCTCAACAATGGGCTAATAA...TGTTCTCTCAAGGGTCCTCAGCAAGACCGAGCCACCCGTCACCCACAGCAGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR-3UTR TCA 90 bp TTACTGCTGTGGGTGACGGGTGGCTCGGTCTTGCTGAGGACCCTTGAGAGAACATATGAATCATCTGGGTaGATGATGAGGCCAAATCCC +
Preference number: 2 (lower is better)
Translates to: LLLWVTGGSVLLRTLERTYESSG*MMRPNP
Trigger: GGGATTTGGCCTCATCATTCACCCAGATGATTCATA...TGTTCTCTCAAGGGTCCTCAGCAAGACCGAGCCACCCGTCACCCACAGCAGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR-3UTR CCA 90 bp TTACTGCTGTGGGTGACGGGTGGCTCGGTCTTGCTGAGGACCCTTGAGAGAACAGATGAAGTCAACCCATaGAACATGGCAGAATGGAGT +
Preference number: 2 (lower is better)
Translates to: LLLWVTGGSVLLRTLERTDEVNP*NMAEWS
Trigger: ACTCCATTCTGCCATGTTCCATGGGTTGACTTCATC...TGTTCTCTCAAGGGTCCTCAGCAAGACCGAGCCACCCGTCACCCACAGCAGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR-3UTR TCA 90 bp TTACTGCTGTGGGTGACGGGTGGCTCGGTCTTGCTGAGGACCCTTGAGAGAACAAGCACAGTTTTAGGATaGAGTCAACCCATGGAACAT +
Preference number: 2 (lower is better)
Translates to: LLLWVTGGSVLLRTLERTSTVLG*SQPMEH
Trigger: ATGTTCCATGGGTTGACTTCATCCTAAAACTGTGCT...TGTTCTCTCAAGGGTCCTCAGCAAGACCGAGCCACCCGTCACCCACAGCAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR-3UTR TCA 90 bp TTACTGCTGTGGGTGACGGGTGGCTCGGTCTTGCTGAGGACCCTTGAGAGAACATACTTTAGAATGGGGTaGACAGCAGGGAAAATGAAC +
Preference number: 2 (lower is better)
Translates to: LLLWVTGGSVLLRTLERTYFRMG*TAGKMN
Trigger: GTTCATTTTCCCTGCTGTTCACCCCATTCTAAAGTA...TGTTCTCTCAAGGGTCCTCAGCAAGACCGAGCCACCCGTCACCCACAGCAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR-3UTR GCA 90 bp TGGCACTGCTTTGGAAGGTGGGGGCCGTCATTACACAAATCCCATGGGTGTGAAATCTATACAGGTGCATaGCAGTCCCCCGGTAATGAA +
Preference number: 2 (lower is better)
Translates to: WHCFGRWGPSLHKSHGCEIYTGA*QSPGNE
Trigger: TTCATTACCGGGGGACTGGCATGCACCTGTATAGAT...TTCACACCCATGGGATTTGTGTAATGACGGCCCCCACCTTCCAAAGCAGTGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR CAA 90 bp GCCTTTCCTAAGTGCTTACAATGTGCCAGCCACTGCACTAAATGTTaGGTATGCACCATCTCACTGCATGCTGGCAGCAACTCCACGAGT +
Preference number: 2 (lower is better)
Translates to: AFPKCLQCASHCTKC*VCTISLHAGSNSTS
Trigger: ACTCGTGGAGTTGCTGCCAGCATGCAGTGAGATGGTGCATACCAAACATTTAGTGCAGTGGCTGGCACATTGTAAGCACTTAGGAAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR-3UTR TCA 90 bp TTACTGCTGTGGGTGACGGGTGGCTCGGTCTTGCTGAGGACCCTTGAGAGAACACTGACAATAGAACAATaGATGAGCAAGACAAGAAGG +
Preference number: 2 (lower is better)
Translates to: LLLWVTGGSVLLRTLERTLTIEQ*MSKTRR
Trigger: CCTTCTTGTCTTGCTCATTCATTGTTCTATTGTCAG...TGTTCTCTCAAGGGTCCTCAGCAAGACCGAGCCACCCGTCACCCACAGCAGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR-3UTR TCA 90 bp GTGCCTTCCCCTGAGTCCCATGACACCCTGCATTTGCTTCTCTTACATTGTATTGCTGTTGATGCTCAGTaGAGTGGTAGCTCTACCTGG +
Preference number: 2 (lower is better)
Translates to: VPSPESHDTLHLLLLHCIAVDAQ*SGSSTW
Trigger: CCAGGTAGAGCTACCACTTCACTGAGCATCAACAGC...AATACAATGTAAGAGAAGCAAATGCAGGGTGTCATGGGACTCAGGGGAAGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR-3UTR CCA 90 bp AAATTGGCAACCACCCAACACAGCCCGGGTTCTCCCTCCTTGAGATGTGAATTTAAGGAGAACACATCTTaGTGGCAGGAGAACCTGGTG +
Preference number: 2 (lower is better)
Translates to: KLATTQHSPGSPSLRCEFKENTS*WQENLV
Trigger: CACCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTT...AAATTCACATCTCAAGGAGGGAGAACCCGGGCTGTGTTGGGTGGTTGCCAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
3UTR-3UTR CCA 90 bp ACGCCCGGCCACCACTGCCATTTTCATCACTTAACCCGAACACATTCCTCTATTAAGGAGAACACATCTTaGTGGCAGGAGAACCTGGTG +
Preference number: 2 (lower is better)
Translates to: TPGHHCHFHHLTRTHSSIKENTS*WQENLV
Trigger: CACCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTT...AATAGAGGAATGTGTTCGGGTTAAGTGATGAAAATGGCAGTGGTGGCCGGGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
3UTR-3UTR CCA 90 bp TGGCACTGCTTTGGAAGGTGGGGGCCGTCATTACACAAATCCCATGGGTGTGAACATAATCCCCTTGCCTaGAACTGCATCCATCATTCA +
Preference number: 2 (lower is better)
Translates to: WHCFGRWGPSLHKSHGCEHNPLA*NCIHHS
Trigger: TGAATGATGGATGCAGTTCCAGGCAAGGGGATTATG...TTCACACCCATGGGATTTGTGTAATGACGGCCCCCACCTTCCAAAGCAGTGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR-3UTR GCA 90 bp CTCCCTTCTTCAAGCTTAGAGGATAAGCACGCATTTACTACAACGCTTAATTCCTCGCCCAGGGTGGAGTaGAATGGTGCAACTTCGGCT +
Preference number: 2 (lower is better)
Translates to: LPSSSLEDKHAFTTTLNSSPRVE*NGATSA
Trigger: AGCCGAAGTTGCACCATTGCACTCCACCCTGGGCGA...GGAATTAAGCGTTGTAGTAAATGCGTGCTTATCCTCTAAGCTTGAAGAAGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
3UTR-3UTR CCA 90 bp TGGCACTGCTTTGGAAGGTGGGGGCCGTCATTACACAAATCCCATGGGTGTGAAGGGACACAGTTAGTTTaGGGAATGGTTAGCCTTAAA +
Preference number: 2 (lower is better)
Translates to: WHCFGRWGPSLHKSHGCEGTQLV*GMVSLK
Trigger: TTTAAGGCTAACCATTCCCCAAACTAACTGTGTCCC...TTCACACCCATGGGATTTGTGTAATGACGGCCCCCACCTTCCAAAGCAGTGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR CAA 90 bp GTGGGCCGGTGCCACTTAATTTGCACTGATAGAGTGAACAAAATCTaGACCACGGAGAAGCCTAATTCTACTCACCGTGCAAAATTGCCC +
Preference number: 2 (lower is better)
Translates to: VGRCHLICTDRVNKI*TTEKPNSTHRAKLP
Trigger: GGGCAATTTTGCACGGTGAGTAGAATTAGGCTTCTCCGTGGTCAAGATTTTGTTCACTCTATCAGTGCAAATTAAGTGGCACCGGCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR-3UTR TCA 90 bp AAATTGGCAACCACCCAACACAGCCCGGGTTCTCCCTCCTTGAGATGTGAATTTTCTGACCCAACTAGGTaGCCTGCTAAACCATCTTTA +
Preference number: 2 (lower is better)
Translates to: KLATTQHSPGSPSLRCEFSDPTR*PAKPSL
Trigger: TAAAGATGGTTTAGCAGGTCACCTAGTTGGGTCAGA...AAATTCACATCTCAAGGAGGGAGAACCCGGGCTGTGTTGGGTGGTTGCCAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
3UTR-3UTR TCA 90 bp GTGCCTTCCCCTGAGTCCCATGACACCCTGCATTTGCTTCTCTTACATTGTATTATGGAGAGGGTTGCGTaGATGCCATTCAAGAAAAGG +
Preference number: 2 (lower is better)
Translates to: VPSPESHDTLHLLLLHCIMERVA*MPFKKR
Trigger: CCTTTTCTTGAATGGCATTCACGCAACCCTCTCCAT...AATACAATGTAAGAGAAGCAAATGCAGGGTGTCATGGGACTCAGGGGAAGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR-3UTR TCA 90 bp GTGCCTTCCCCTGAGTCCCATGACACCCTGCATTTGCTTCTCTTACATTGTATTCACGTGGCTGCATTTTaGCAAAAGCAAGCTTCTGAG +
Preference number: 2 (lower is better)
Translates to: VPSPESHDTLHLLLLHCIHVAAF*QKQASE
Trigger: CTCAGAAGCTTGCTTTTGTCAAAATGCAGCCACGTG...AATACAATGTAAGAGAAGCAAATGCAGGGTGTCATGGGACTCAGGGGAAGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR-3UTR GCA 90 bp AAATTGGCAACCACCCAACACAGCCCGGGTTCTCCCTCCTTGAGATGTGAATTTTTTTTGATAGAATCTTaGTCTGTCGCCCAGGGTGGA +
Preference number: 2 (lower is better)
Translates to: KLATTQHSPGSPSLRCEFFLIES*SVAQGG
Trigger: TCCACCCTGGGCGACAGAGCAAGATTCTATCAAAAA...AAATTCACATCTCAAGGAGGGAGAACCCGGGCTGTGTTGGGTGGTTGCCAATTT
48% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
3UTR-3UTR GCA 90 bp TGGCACTGCTTTGGAAGGTGGGGGCCGTCATTACACAAATCCCATGGGTGTGAATGCTTCTGGACTGTTTaGAAACAGACAAGAACAATC +
Preference number: 2 (lower is better)
Translates to: WHCFGRWGPSLHKSHGCECFWTV*KQTRTI
Trigger: GATTGTTCTTGTCTGTTTGCAAACAGTCCAGAAGCA...TTCACACCCATGGGATTTGTGTAATGACGGCCCCCACCTTCCAAAGCAGTGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR-3UTR GCA 90 bp GTGCCTTCCCCTGAGTCCCATGACACCCTGCATTTGCTTCTCTTACATTGTATTCTTGCCTTTCCTAAGTaGTTACAATGTGCCAGCCAC +
Preference number: 2 (lower is better)
Translates to: VPSPESHDTLHLLLLHCILAFPK*LQCASH
Trigger: GTGGCTGGCACATTGTAAGCACTTAGGAAAGGCAAG...AATACAATGTAAGAGAAGCAAATGCAGGGTGTCATGGGACTCAGGGGAAGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR-3UTR CCA 90 bp TCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGAGATGAGAACACATCTTGGTaGCAGGAGAACCTGGTGGGA +
Preference number: 2 (lower is better)
Translates to: SFAGHQKNIYMERVWGGDENTSW*QENLVG
Trigger: TCCCACCAGGTTCTCCTGCCACCAAGATGTGTTCTC...ATCTCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
3UTR CAA 90 bp GGTCTTGCGCCAGTGCCTTCCCCTGAGTCCCATGACACCCTGCATTaGCTTCTCTTACATTGTATTATTATTATCTTTTTGCCTGCCTGT +
Preference number: 2 (lower is better)
Translates to: GLAPVPSPESHDTLH*LLLHCIIIIFLPAC
Trigger: ACAGGCAGGCAAAAAGATAATAATAATACAATGTAAGAGAAGCAAATGCAGGGTGTCATGGGACTCAGGGGAAGGCACTGGCGCAAGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR-3UTR TCA 90 bp TCCTTGAGCTTCTTCCAAGATAGAGCAGATAAGGATGGAAACACAAACCAACCACAAAGGGCTGGATCCTaGCCGGCATTCTGCACTAAA +
Preference number: 2 (lower is better)
Translates to: SLSFFQDRADKDGNTNQPQRAGS*PAFCTK
Trigger: TTTAGTGCAGAATGCCGGTCAGGATCCAGCCCTTTG...TGGTTGGTTTGTGTTTCCATCCTTATCTGCTCTATCTTGGAAGAAGCTCAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR-3UTR GCA 90 bp GTTTTATCAGAGCACATCCTGAGAACATTAGGAATGACAGACACACTTGAGATAGCAACTTCGGCTCACTaGAACCTCCACCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: VLSEHILRTLGMTDTLEIATSAH*NLHLLG
Trigger: ACCCAGGAGGTGGAGGTTGCAGTGAGCCGAAGTTGC...TATCTCAAGTGTGTCTGTCATTCCTAATGTTCTCAGGATGTGCTCTGATAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
3UTR-3UTR CCA 90 bp AATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGGAGAACACATCTTGGTaGCAGGAGAACCTGGTGGGA +
Preference number: 2 (lower is better)
Translates to: NFICWPSEEYIHGACLGRENTSW*QENLVG
Trigger: TCCCACCAGGTTCTCCTGCCACCAAGATGTGTTCTC...CCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
3UTR-3UTR CCA 90 bp GTTTTATCAGAGCACATCCTGAGAACATTAGGAATGACAGACACACTTGAGATAGCAACCTCCACCTCCTaGGTACAAGCGGTTCTCGTG +
Preference number: 2 (lower is better)
Translates to: VLSEHILRTLGMTDTLEIATSTS*VQAVLV
Trigger: CACGAGAACCGCTTGTACCCAGGAGGTGGAGGTTGC...TATCTCAAGTGTGTCTGTCATTCCTAATGTTCTCAGGATGTGCTCTGATAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
3UTR CAA 90 bp ATGCTGGCAGCAACTCCACGAGTAGGCTCTATTATTAGCCCATTGTaGAGGGAGGACACTCAGAGTTTAAATCACTTGCTCTTTAGTTGG +
Preference number: 2 (lower is better)
Translates to: MLAATPRVGSIISPL*REDTQSLNHLLFSW
Trigger: CCAACTAAAGAGCAAGTGATTTAAACTCTGAGTGTCCTCCCTCAACAATGGGCTAATAATAGAGCCTACTCGTGGAGTTGCTGCCAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR CAA 90 bp TGCATGCTGGCAGCAACTCCACGAGTAGGCTCTATTATTAGCCCATaGTTGAGGGAGGACACTCAGAGTTTAAATCACTTGCTCTTTAGT +
Preference number: 2 (lower is better)
Translates to: CMLAATPRVGSIISP*LREDTQSLNHLLFS
Trigger: ACTAAAGAGCAAGTGATTTAAACTCTGAGTGTCCTCCCTCAACAATGGGCTAATAATAGAGCCTACTCGTGGAGTTGCTGCCAGCATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR CAA 90 bp CCTGTCTCTCCCACAGACATGAAAGCAAGCTTTTATGTACTTAGGTaGGATTTCAACCTTGGCTCTGCCATGTGTGTTCTTGGGCAAAGT +
Preference number: 2 (lower is better)
Translates to: PVSPTDMKASFYVLR*DFNLGSAMCVLGQS
Trigger: ACTTTGCCCAAGAACACACATGGCAGAGCCAAGGTTGAAATCCAACCTAAGTACATAAAAGCTTGCTTTCATGTCTGTGGGAGAGACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR CAA 90 bp TCCCATTCCACAGAGGAACAAACTAAGGCTCTGAGAAGAAGTAATTaGCTCAAGACCTCACAGCCTGGGATCATGGGTATGAATCATCTG +
Preference number: 2 (lower is better)
Translates to: SHSTEEQTKALRRSN*LKTSQPGIMGMNHL
Trigger: CAGATGATTCATACCCATGATCCCAGGCTGTGAGGTCTTGAGCAAATTACTTCTTCTCAGAGCCTTAGTTTGTTCCTCTGTGGAATGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR-3UTR GCA 90 bp TCCTTGAGCTTCTTCCAAGATAGAGCAGATAAGGATGGAAACACAAACCAACCACAGATTGGAGAAATCTaGACCCTTCCAGGCACTCTG +
Preference number: 2 (lower is better)
Translates to: SLSFFQDRADKDGNTNQPQIGEI*TLPGTL
Trigger: CAGAGTGCCTGGAAGGGTGCAGATTTCTCCAATCTG...TGGTTGGTTTGTGTTTCCATCCTTATCTGCTCTATCTTGGAAGAAGCTCAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR-3UTR CCA 90 bp TGGCACTGCTTTGGAAGGTGGGGGCCGTCATTACACAAATCCCATGGGTGTGAAAACCTTATCTTCATTTaGAGGACTGAGAATCATAGA +
Preference number: 2 (lower is better)
Translates to: WHCFGRWGPSLHKSHGCENLIFI*RTENHR
Trigger: TCTATGATTCTCAGTCCTCCAAATGAAGATAAGGTT...TTCACACCCATGGGATTTGTGTAATGACGGCCCCCACCTTCCAAAGCAGTGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR-3UTR GCA 90 bp AAATTGGCAACCACCCAACACAGCCCGGGTTCTCCCTCCTTGAGATGTGAATTTATCTTTACTGTTATTTaGCAGAAAAGACTGGACCAG +
Preference number: 2 (lower is better)
Translates to: KLATTQHSPGSPSLRCEFIFTVI*QKRLDQ
Trigger: CTGGTCCAGTCTTTTCTGGCAAATAACAGTAAAGAT...AAATTCACATCTCAAGGAGGGAGAACCCGGGCTGTGTTGGGTGGTTGCCAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
3UTR-3UTR GCA 90 bp TCTCCCACAGACATGAAAGCAAGCTTTTATGTACTTAGGTTGGATTTCAACCTTAAGGACCTCACTGGCTaGTGGGAACAACTGCCCTTT +
Preference number: 2 (lower is better)
Translates to: SPTDMKASFYVLRLDFNLKDLTG*WEQLPF
Trigger: AAAGGGCAGTTGTTCCCAGCAGCCAGTGAGGTCCTT...AAGGTTGAAATCCAACCTAAGTACATAAAAGCTTGCTTTCATGTCTGTGGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR-3UTR GCA 90 bp TCTCCCACAGACATGAAAGCAAGCTTTTATGTACTTAGGTTGGATTTCAACCTTCTCCAAGACAACGAATaGAGGAAGGACCTCACTGGC +
Preference number: 2 (lower is better)
Translates to: SPTDMKASFYVLRLDFNLLQDNE*RKDLTG
Trigger: GCCAGTGAGGTCCTTCCTGCATTCGTTGTCTTGGAG...AAGGTTGAAATCCAACCTAAGTACATAAAAGCTTGCTTTCATGTCTGTGGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR-3UTR GCA 90 bp ATTTCCTCATTATCGTTGTTAGCTGGAAGAGAGTCTCAGAGAATCAAAGCCAAATGTGAAATTGTGGACTaGAACTTCTGCCGGGGCCAG +
Preference number: 2 (lower is better)
Translates to: ISSLSLLAGRESQRIKAKCEIVD*NFCRGQ
Trigger: CTGGCCCCGGCAGAAGTTGCAGTCCACAATTTCACA...TTTGGCTTTGATTCTCTGAGACTCTCTTCCAGCTAACAACGATAATGAGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR-3UTR CCA 90 bp GTTTTATCAGAGCACATCCTGAGAACATTAGGAATGACAGACACACTTGAGATAGAGAACACATCTTGGTaGCAGGAGAACCTGGTGGGA +
Preference number: 2 (lower is better)
Translates to: VLSEHILRTLGMTDTLEIENTSW*QENLVG
Trigger: TCCCACCAGGTTCTCCTGCCACCAAGATGTGTTCTC...TATCTCAAGTGTGTCTGTCATTCCTAATGTTCTCAGGATGTGCTCTGATAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
3UTR-3UTR CCA 90 bp GTGCCTTCCCCTGAGTCCCATGACACCCTGCATTTGCTTCTCTTACATTGTATTAATCCACAATGGGTGTaGCCACAGGATATTTGTTTA +
Preference number: 2 (lower is better)
Translates to: VPSPESHDTLHLLLLHCINPQWV*PQDICL
Trigger: TAAACAAATATCCTGTGGCCACACCCATTGTGGATT...AATACAATGTAAGAGAAGCAAATGCAGGGTGTCATGGGACTCAGGGGAAGGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR-3UTR GCA 90 bp GTGCCTTCCCCTGAGTCCCATGACACCCTGCATTTGCTTCTCTTACATTGTATTTTCTATTTTGTTATGTaGCTCCTTCTCCAAGACAAC +
Preference number: 2 (lower is better)
Translates to: VPSPESHDTLHLLLLHCIFYFVM*LLLQDN
Trigger: GTTGTCTTGGAGAAGGAGGCACATAACAAAATAGAA...AATACAATGTAAGAGAAGCAAATGCAGGGTGTCATGGGACTCAGGGGAAGGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR-3UTR GCA 90 bp TCCTTGAGCTTCTTCCAAGATAGAGCAGATAAGGATGGAAACACAAACCAACCAAGAGGGTTGCGTGAATaGCATTCAAGAAAAGGGCAA +
Preference number: 2 (lower is better)
Translates to: SLSFFQDRADKDGNTNQPRGLRE*HSRKGQ
Trigger: TTGCCCTTTTCTTGAATGGCATTCACGCAACCCTCT...TGGTTGGTTTGTGTTTCCATCCTTATCTGCTCTATCTTGGAAGAAGCTCAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR-3UTR CCA 90 bp GTGCCTTCCCCTGAGTCCCATGACACCCTGCATTTGCTTCTCTTACATTGTATTATTATCGTTGTTAGCTaGAAGAGAGTCTCAGAGAAT +
Preference number: 2 (lower is better)
Translates to: VPSPESHDTLHLLLLHCIIIVVS*KRVSEN
Trigger: ATTCTCTGAGACTCTCTTCCAGCTAACAACGATAAT...AATACAATGTAAGAGAAGCAAATGCAGGGTGTCATGGGACTCAGGGGAAGGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR-3UTR CCA 90 bp TCTCCCACAGACATGAAAGCAAGCTTTTATGTACTTAGGTTGGATTTCAACCTTTTAGAACCACTGGGCTaGTTACCTGGGAAGGGTAGA +
Preference number: 2 (lower is better)
Translates to: SPTDMKASFYVLRLDFNLLEPLG*LPGKGR
Trigger: TCTACCCTTCCCAGGTAACCAGCCCAGTGGTTCTAA...AAGGTTGAAATCCAACCTAAGTACATAAAAGCTTGCTTTCATGTCTGTGGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR-3UTR GCA 90 bp CTTACAAGGACCCTATTTGAAAAACAACGCTTATTCATTCCTTTTTCTATACCCACGCCCGGCCACCACTaGCATTTTCATCACTTAACC +
Preference number: 2 (lower is better)
Translates to: LTRTLFEKQRLFIPFSIPTPGHH*HFHHLT
Trigger: GGTTAAGTGATGAAAATGGCAGTGGTGGCCGGGCGT...GGGTATAGAAAAAGGAATGAATAAGCGTTGTTTTTCAAATAGGGTCCTTGTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
3UTR-3UTR GCA 90 bp ATTTCCTCATTATCGTTGTTAGCTGGAAGAGAGTCTCAGAGAATCAAAGCCAAAAGAAGGCAACTGACTTaGCCAGTTCAGCTTTCTCGT +
Preference number: 2 (lower is better)
Translates to: ISSLSLLAGRESQRIKAKRRQLT*PVQLSR
Trigger: ACGAGAAAGCTGAACTGGGCAAGTCAGTTGCCTTCT...TTTGGCTTTGATTCTCTGAGACTCTCTTCCAGCTAACAACGATAATGAGGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR-3UTR CCA 90 bp CTCCCTTCTTCAAGCTTAGAGGATAAGCACGCATTTACTACAACGCTTAATTCCAGAAGAATATATACATaGAGCGTGTTTGGGGAGGAG +
Preference number: 2 (lower is better)
Translates to: LPSSSLEDKHAFTTTLNSRRIYT*SVFGEE
Trigger: CTCCTCCCCAAACACGCTCCATGTATATATTCTTCT...GGAATTAAGCGTTGTAGTAAATGCGTGCTTATCCTCTAAGCTTGAAGAAGGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
3UTR-3UTR CCA 90 bp TCTCCCACAGACATGAAAGCAAGCTTTTATGTACTTAGGTTGGATTTCAACCTTTCAACCCATGGAACATaGCAGAATGGAGTGTCAGAG +
Preference number: 2 (lower is better)
Translates to: SPTDMKASFYVLRLDFNLSTHGT*QNGVSE
Trigger: CTCTGACACTCCATTCTGCCATGTTCCATGGGTTGA...AAGGTTGAAATCCAACCTAAGTACATAAAAGCTTGCTTTCATGTCTGTGGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR-3UTR TCA 90 bp GTTTTATCAGAGCACATCCTGAGAACATTAGGAATGACAGACACACTTGAGATATCTGACCCAACTAGGTaGCCTGCTAAACCATCTTTA +
Preference number: 2 (lower is better)
Translates to: VLSEHILRTLGMTDTLEISDPTR*PAKPSL
Trigger: TAAAGATGGTTTAGCAGGTCACCTAGTTGGGTCAGA...TATCTCAAGTGTGTCTGTCATTCCTAATGTTCTCAGGATGTGCTCTGATAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
3UTR-3UTR TCA 90 bp ATTTCCTCATTATCGTTGTTAGCTGGAAGAGAGTCTCAGAGAATCAAAGCCAAAATCATAGAAGGCAACTaGCTTGCCCAGTTCAGCTTT +
Preference number: 2 (lower is better)
Translates to: ISSLSLLAGRESQRIKAKIIEGN*LAQFSF
Trigger: AAAGCTGAACTGGGCAAGTCAGTTGCCTTCTATGAT...TTTGGCTTTGATTCTCTGAGACTCTCTTCCAGCTAACAACGATAATGAGGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR-3UTR GCA 90 bp ATTTCCTCATTATCGTTGTTAGCTGGAAGAGAGTCTCAGAGAATCAAAGCCAAATTAATGAGACCCCAGTaGTTCTGGACTGTTTGCAAA +
Preference number: 2 (lower is better)
Translates to: ISSLSLLAGRESQRIKAKLMRPQ*FWTVCK
Trigger: TTTGCAAACAGTCCAGAAGCACTGGGGTCTCATTAA...TTTGGCTTTGATTCTCTGAGACTCTCTTCCAGCTAACAACGATAATGAGGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR-3UTR GCA 90 bp TCCTTGAGCTTCTTCCAAGATAGAGCAGATAAGGATGGAAACACAAACCAACCACCTATAATCTTACATTaGTGCAAAGCACATTCCCTA +
Preference number: 2 (lower is better)
Translates to: SLSFFQDRADKDGNTNQPPIILH*CKAHSL
Trigger: TAGGGAATGTGCTTTGCAGCAATGTAAGATTATAGG...TGGTTGGTTTGTGTTTCCATCCTTATCTGCTCTATCTTGGAAGAAGCTCAAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR-3UTR CCA 90 bp ATTTCCTCATTATCGTTGTTAGCTGGAAGAGAGTCTCAGAGAATCAAAGCCAAATTGTCAGATTCAGATTaGAGAAATCTGCACCCTTCC +
Preference number: 2 (lower is better)
Translates to: ISSLSLLAGRESQRIKAKLSDSD*RNLHPS
Trigger: GGAAGGGTGCAGATTTCTCCAATCTGAATCTGACAA...TTTGGCTTTGATTCTCTGAGACTCTCTTCCAGCTAACAACGATAATGAGGAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR-3UTR TCA 90 bp TCTCCCACAGACATGAAAGCAAGCTTTTATGTACTTAGGTTGGATTTCAACCTTTTATCCTTACTTCTGTaGAATTGTGGACTGCAACTT +
Preference number: 2 (lower is better)
Translates to: SPTDMKASFYVLRLDFNLLSLLL*NCGLQL
Trigger: AAGTTGCAGTCCACAATTTCACAGAAGTAAGGATAA...AAGGTTGAAATCCAACCTAAGTACATAAAAGCTTGCTTTCATGTCTGTGGGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR GCA 72 bp AGTGGCCAACCTCCACCCACTGTGGTCTTGCGCCAGTaGCTTCCCCTGAGTCCCATGACACCCTGCATTTGC +
Preference number: 3 (lower is better)
Translates to: SGQPPPTVVLRQ*LPLSPMTPCIC
Trigger: GCAAATGCAGGGTGTCATGGGACTCAGGGGAAGGCACTGGCGCAAGACCACAGTGGGTGGAGGTTGGCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR-3UTR CAA 90 bp TTACTGCTGTGGGTGACGGGTGGCTCGGTCTTGCTGAGGACCCTTGAGAGAACAAGAGGTAAGGCTGCTTaGTGGAGCAGGATGGGCCAG +
Preference number: 3 (lower is better)
Translates to: LLLWVTGGSVLLRTLERTRGKAA*WSRMGQ
Trigger: CTGGCCCATCCTGCTCCACAAAGCAGCCTTACCTCT...TGTTCTCTCAAGGGTCCTCAGCAAGACCGAGCCACCCGTCACCCACAGCAGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR TCA 72 bp GTGGGTGACGGGTGGCTCGGTCTTGCTGAGGACCCTTaGGAGAACACAAAGACGACCCCTCAACATTGTCCC +
Preference number: 3 (lower is better)
Translates to: VGDGWLGLAEDP*ENTKTTPQHCP
Trigger: GGGACAATGTTGAGGGGTCGTCTTTGTGTTCTCTCAAGGGTCCTCAGCAAGACCGAGCCACCCGTCACCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR GCA 72 bp GGAACTGGAAGGGAGGTGTGTGTGTGTGTGTGTGTGTaGGCGTGTGTGTGTGTACGCGCAGTGGCAGCCATT +
Preference number: 3 (lower is better)
Translates to: GTGREVCVCVCV*ACVCVRAVAAI
Trigger: AATGGCTGCCACTGCGCGTACACACACACACGCGCACACACACACACACACACACACCTCCCTTCCAGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR GCA 72 bp CTGAAGACGATGGGGCAGGGCAGCCACAGCACCTACTaGCATGGCGACTTGGCCACCGTTATAAGTAGATGC +
Preference number: 3 (lower is better)
Translates to: LKTMGQGSHSTY*HGDLATVISRC
Trigger: GCATCTACTTATAACGGTGGCCAAGTCGCCATGGCAGTAGGTGCTGTGGCTGCCCTGCCCCATCGTCTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR GCA 72 bp CTGCCATTCTCTCTGTGGACCCTGGGCTCTTGCACTTaGTGTTCTTCTGGGAGCCCTTTTGTCCAACGCTTA +
Preference number: 3 (lower is better)
Translates to: LPFSLWTLGSCT*CSSGSPFVQRL
Trigger: TAAGCGTTGGACAAAAGGGCTCCCAGAAGAACAGCAAGTGCAAGAGCCCAGGGTCCACAGAGAGAATGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR GCA 72 bp AGCTACCTGCCATTCTCTCTGTGGACCCTGGGCTCTTaGACTTGCTGTTCTTCTGGGAGCCCTTTTGTCCAA +
Preference number: 3 (lower is better)
Translates to: SYLPFSLWTLGS*TCCSSGSPFVQ
Trigger: TTGGACAAAAGGGCTCCCAGAAGAACAGCAAGTGCAAGAGCCCAGGGTCCACAGAGAGAATGGCAGGTAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR CCA 72 bp ACTTCAGCCATGCTAAGCTACCTGCCATTCTCTCTGTaGACCCTGGGCTCTTGCACTTGCTGTTCTTCTGGG +
Preference number: 3 (lower is better)
Translates to: TSAMLSYLPFSL*TLGSCTCCSSG
Trigger: CCCAGAAGAACAGCAAGTGCAAGAGCCCAGGGTCCACAGAGAGAATGGCAGGTAGCTTAGCATGGCTGAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR TCA 72 bp CTCAGGCTGAGGTCATCTGCATCCTCATCAATAAGCTaGCTGAGCACTCATTACCTGCCAGACACGGTGCCT +
Preference number: 3 (lower is better)
Translates to: LRLRSSASSSIS*LSTHYLPDTVP
Trigger: AGGCACCGTGTCTGGCAGGTAATGAGTGCTCAGTCAGCTTATTGATGAGGATGCAGATGACCTCAGCCTGAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR CCA 72 bp ATGGTTACCAGTCAAAAAGTCACCGTCAGCTGGAACTaGAAGGGAGGTGTGTGTGTGTGTGTGTGTGTGCGC +
Preference number: 3 (lower is better)
Translates to: MVTSQKVTVSWN*KGGVCVCVCVR
Trigger: GCGCACACACACACACACACACACACCTCCCTTCCAGTTCCAGCTGACGGTGACTTTTTGACTGGTAACCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR-3UTR CAA 90 bp GTGCCTTCCCCTGAGTCCCATGACACCCTGCATTTGCTTCTCTTACATTGTATTTCTAGTGGCACTGCTTaGGAAGGTGGGGGCCGTCAT +
Preference number: 3 (lower is better)
Translates to: VPSPESHDTLHLLLLHCISSGTA*EGGGRH
Trigger: ATGACGGCCCCCACCTTCCAAAGCAGTGCCACTAGA...AATACAATGTAAGAGAAGCAAATGCAGGGTGTCATGGGACTCAGGGGAAGGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR-3UTR CAA 90 bp TTACTGCTGTGGGTGACGGGTGGCTCGGTCTTGCTGAGGACCCTTGAGAGAACAAGAGTGAACAAAATCTaGACCACGGAGAAGCCTAAT +
Preference number: 3 (lower is better)
Translates to: LLLWVTGGSVLLRTLERTRVNKI*TTEKPN
Trigger: ATTAGGCTTCTCCGTGGTCAAGATTTTGTTCACTCT...TGTTCTCTCAAGGGTCCTCAGCAAGACCGAGCCACCCGTCACCCACAGCAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR-3UTR CAA 90 bp TTACTGCTGTGGGTGACGGGTGGCTCGGTCTTGCTGAGGACCCTTGAGAGAACACAGAGTTTAAATCACTaGCTCTTTAGTTGGGAGTGG +
Preference number: 3 (lower is better)
Translates to: LLLWVTGGSVLLRTLERTQSLNH*LFSWEW
Trigger: CCACTCCCAACTAAAGAGCAAGTGATTTAAACTCTG...TGTTCTCTCAAGGGTCCTCAGCAAGACCGAGCCACCCGTCACCCACAGCAGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR GCA 72 bp TATCCTTACTTCTGTGAAATTGTGGACTGCAACTTCTaGCGGGGCCAGTTAAAGGGCCAGGAGATGGAGAGG +
Preference number: 3 (lower is better)
Translates to: YPYFCEIVDCNF*RGQLKGQEMER
Trigger: CCTCTCCATCTCCTGGCCCTTTAACTGGCCCCGGCAGAAGTTGCAGTCCACAATTTCACAGAAGTAAGGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR CCA 72 bp CTTTTTCTATACCCCACACATTCCGTTCTAGGAAATTaGCAACCACCCAACACAGCCCGGGTTCTCCCTCCT +
Preference number: 3 (lower is better)
Translates to: LFLYPTHSVLGN*QPPNTARVLPP
Trigger: AGGAGGGAGAACCCGGGCTGTGTTGGGTGGTTGCCAATTTCCTAGAACGGAATGTGTGGGGTATAGAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
3UTR-3UTR CAA 90 bp TTACTGCTGTGGGTGACGGGTGGCTCGGTCTTGCTGAGGACCCTTGAGAGAACACTGTCTACTGTATCATaGTATTGCCTTCTCAACATG +
Preference number: 3 (lower is better)
Translates to: LLLWVTGGSVLLRTLERTLSTVS*YCLLNM
Trigger: CATGTTGAGAAGGCAATACAATGATACAGTAGACAG...TGTTCTCTCAAGGGTCCTCAGCAAGACCGAGCCACCCGTCACCCACAGCAGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR GCA 72 bp GCCACTGCACTAAATGTTTGGTATGCACCATCTCACTaGATGCTGGCAGCAACTCCACGAGTAGGCTCTATT +
Preference number: 3 (lower is better)
Translates to: ATALNVWYAPSH*MLAATPRVGSI
Trigger: AATAGAGCCTACTCGTGGAGTTGCTGCCAGCATGCAGTGAGATGGTGCATACCAAACATTTAGTGCAGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR GCA 72 bp TTACAATGTGCCAGCCACTGCACTAAATGTTTGGTATaGACCATCTCACTGCATGCTGGCAGCAACTCCACG +
Preference number: 3 (lower is better)
Translates to: LQCASHCTKCLV*TISLHAGSNST
Trigger: CGTGGAGTTGCTGCCAGCATGCAGTGAGATGGTGCATACCAAACATTTAGTGCAGTGGCTGGCACATTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR GCA 72 bp TTTGATTCTGCGGGTATGGAGTGGGGCTTGAGAGTTTaGATTCCTAACATGTTCTCAGGTGGTGCTGAGGCT +
Preference number: 3 (lower is better)
Translates to: FDSAGMEWGLRV*IPNMFSGGAEA
Trigger: AGCCTCAGCACCACCTGAGAACATGTTAGGAATGCAAACTCTCAAGCCCCACTCCATACCCGCAGAATCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR-3UTR CAA 90 bp TGGCACTGCTTTGGAAGGTGGGGGCCGTCATTACACAAATCCCATGGGTGTGAAGTGCTTCTGGACTGTTaGCAAACAGACAAGAACAAT +
Preference number: 3 (lower is better)
Translates to: WHCFGRWGPSLHKSHGCEVLLDC*QTDKNN
Trigger: ATTGTTCTTGTCTGTTTGCAAACAGTCCAGAAGCAC...TTCACACCCATGGGATTTGTGTAATGACGGCCCCCACCTTCCAAAGCAGTGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR-3UTR CAA 90 bp TGGCACTGCTTTGGAAGGTGGGGGCCGTCATTACACAAATCCCATGGGTGTGAAATTGTCAGATTCAGATaGGAGAAATCTGCACCCTTC +
Preference number: 3 (lower is better)
Translates to: WHCFGRWGPSLHKSHGCEIVRFR*EKSAPF
Trigger: GAAGGGTGCAGATTTCTCCAATCTGAATCTGACAAT...TTCACACCCATGGGATTTGTGTAATGACGGCCCCCACCTTCCAAAGCAGTGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR-3UTR CAA 90 bp GTGCCTTCCCCTGAGTCCCATGACACCCTGCATTTGCTTCTCTTACATTGTATTAGGAGATGGAGAGGGTaGCGTGAATGCCATTCAAGA +
Preference number: 3 (lower is better)
Translates to: VPSPESHDTLHLLLLHCIRRWRG*RECHSR
Trigger: TCTTGAATGGCATTCACGCAACCCTCTCCATCTCCT...AATACAATGTAAGAGAAGCAAATGCAGGGTGTCATGGGACTCAGGGGAAGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR TCA 72 bp AAGGTGGGGGCCGTCATTACACAAATCCCATGGGTGTaGATTGAAGGGACACAGTTAGTTTGGGGAATGGTT +
Preference number: 3 (lower is better)
Translates to: KVGAVITQIPWV*IEGTQLVWGMV
Trigger: AACCATTCCCCAAACTAACTGTGTCCCTTCAATTCACACCCATGGGATTTGTGTAATGACGGCCCCCACCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR GCA 72 bp TATTTTGTTATGTGCCTCCTTCTCCAAGACAACGAATaGAGGAAGGACCTCACTGGCTGCTGGGAACAACTG +
Preference number: 3 (lower is better)
Translates to: YFVMCLLLQDNE*RKDLTGCWEQL
Trigger: CAGTTGTTCCCAGCAGCCAGTGAGGTCCTTCCTGCATTCGTTGTCTTGGAGAAGGAGGCACATAACAAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR CCA 72 bp AGTGCTTACAATGTGCCAGCCACTGCACTAAATGTTTaGTATGCACCATCTCACTGCATGCTGGCAGCAACT +
Preference number: 3 (lower is better)
Translates to: SAYNVPATALNV*YAPSHCMLAAT
Trigger: AGTTGCTGCCAGCATGCAGTGAGATGGTGCATACCAAACATTTAGTGCAGTGGCTGGCACATTGTAAGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR CCA 72 bp CCCACCCCAAGAGTTTTTGATTCTGCGGGTATGGAGTaGGGCTTGAGAGTTTGCATTCCTAACATGTTCTCA +
Preference number: 3 (lower is better)
Translates to: PTPRVFDSAGME*GLRVCIPNMFS
Trigger: TGAGAACATGTTAGGAATGCAAACTCTCAAGCCCCACTCCATACCCGCAGAATCAAAAACTCTTGGGGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR TCA 72 bp CAAGAGTTTTTGATTCTGCGGGTATGGAGTGGGGCTTaGGAGTTTGCATTCCTAACATGTTCTCAGGTGGTG +
Preference number: 3 (lower is better)
Translates to: QEFLILRVWSGA*EFAFLTCSQVV
Trigger: CACCACCTGAGAACATGTTAGGAATGCAAACTCTCAAGCCCCACTCCATACCCGCAGAATCAAAAACTCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR TCA 72 bp CTCACAGCCTGGGATCATGGGTATGAATCATCTGGGTaGATGATGAGGCCAAATCCCAAGTCCATGTTTATG +
Preference number: 3 (lower is better)
Translates to: LTAWDHGYESSG*MMRPNPKSMFM
Trigger: CATAAACATGGACTTGGGATTTGGCCTCATCATTCACCCAGATGATTCATACCCATGATCCCAGGCTGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR TCA 72 bp ATTTGCTCAAGACCTCACAGCCTGGGATCATGGGTATaGATCATCTGGGTGAATGATGAGGCCAAATCCCAA +
Preference number: 3 (lower is better)
Translates to: ICSRPHSLGSWV*IIWVNDEAKSQ
Trigger: TTGGGATTTGGCCTCATCATTCACCCAGATGATTCATACCCATGATCCCAGGCTGTGAGGTCTTGAGCAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR CCA 72 bp ACTGGGGCAAAGTTTAAGGATGTCGCAAAGTCTGGGTaGCCTTCAGTCCATGAAAGAGAACACATCTGTTCT +
Preference number: 3 (lower is better)
Translates to: TGAKFKDVAKSG*PSVHEREHICS
Trigger: AGAACAGATGTGTTCTCTTTCATGGACTGAAGGCCACCCAGACTTTGCGACATCCTTAAACTTTGCCCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR-3UTR CAA 90 bp CTCCCTTCTTCAAGCTTAGAGGATAAGCACGCATTTACTACAACGCTTAATTCCATACATGGAGCGTGTTaGGGGAGGAGATGGAGTAAG +
Preference number: 3 (lower is better)
Translates to: LPSSSLEDKHAFTTTLNSIHGAC*GRRWSK
Trigger: CTTACTCCATCTCCTCCCCAAACACGCTCCATGTAT...GGAATTAAGCGTTGTAGTAAATGCGTGCTTATCCTCTAAGCTTGAAGAAGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
3UTR TCA 72 bp CTGGAACTGCATCCATCATTCAGCACAGTTTTAGGATaGAGTCAACCCATGGAACATGGCAGAATGGAGTGT +
Preference number: 3 (lower is better)
Translates to: LELHPSFSTVLG*SQPMEHGRMEC
Trigger: ACACTCCATTCTGCCATGTTCCATGGGTTGACTTCATCCTAAAACTGTGCTGAATGATGGATGCAGTTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR GCA 72 bp ATAATGTATTATCCTTACTTCTGTGAAATTGTGGACTaGAACTTCTGCCGGGGCCAGTTAAAGGGCCAGGAG +
Preference number: 3 (lower is better)
Translates to: IMYYPYFCEIVD*NFCRGQLKGQE
Trigger: CTCCTGGCCCTTTAACTGGCCCCGGCAGAAGTTGCAGTCCACAATTTCACAGAAGTAAGGATAATACATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR GCA 72 bp CTTGCCTTTCCTAAGTGCTTACAATGTGCCAGCCACTaGACTAAATGTTTGGTATGCACCATCTCACTGCAT +
Preference number: 3 (lower is better)
Translates to: LAFPKCLQCASH*TKCLVCTISLH
Trigger: ATGCAGTGAGATGGTGCATACCAAACATTTAGTGCAGTGGCTGGCACATTGTAAGCACTTAGGAAAGGCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR TCA 72 bp GGGCTGGATCCTGACCGGCATTCTGCACTAAAGATCTaGATTACAAATTTAGAGAATTTGCTGCTCGGTAAG +
Preference number: 3 (lower is better)
Translates to: GLDPDRHSALKI*ITNLENLLLGK
Trigger: CTTACCGAGCAGCAAATTCTCTAAATTTGTAATTCAGATCTTTAGTGCAGAATGCCGGTCAGGATCCAGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR TCA 72 bp TCTTCATTTGGAGGACTGAGAATCATAGAAGGCAACTaGCTTGCCCAGTTCAGCTTTCTCGTTCTAGTTCTC +
Preference number: 3 (lower is better)
Translates to: SSFGGLRIIEGN*LAQFSFLVLVL
Trigger: GAGAACTAGAACGAGAAAGCTGAACTGGGCAAGTCAGTTGCCTTCTATGATTCTCAGTCCTCCAAATGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR GCA 72 bp TTGCGCCAGTGCCTTCCCCTGAGTCCCATGACACCCTaGATTTGCTTCTCTTACATTGTATTATTATTATCT +
Preference number: 3 (lower is better)
Translates to: LRQCLPLSPMTP*ICFSYIVLLLS
Trigger: AGATAATAATAATACAATGTAAGAGAAGCAAATGCAGGGTGTCATGGGACTCAGGGGAAGGCACTGGCGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR GCA 72 bp GAGAACACATCTGTTCTATCTCAGGCTGAGGTCATCTaGATCCTCATCAATAAGCTGACTGAGCACTCATTA +
Preference number: 3 (lower is better)
Translates to: ENTSVLSQAEVI*ILINKLTEHSL
Trigger: TAATGAGTGCTCAGTCAGCTTATTGATGAGGATGCAGATGACCTCAGCCTGAGATAGAACAGATGTGTTCTC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR-3UTR CAA 90 bp TCTCCCACAGACATGAAAGCAAGCTTTTATGTACTTAGGTTGGATTTCAACCTTATTCCCATAATCCCCTaGCCTGGAACTGCATCCATC +
Preference number: 3 (lower is better)
Translates to: SPTDMKASFYVLRLDFNLIPIIP*PGTASI
Trigger: GATGGATGCAGTTCCAGGCAAGGGGATTATGGGAAT...AAGGTTGAAATCCAACCTAAGTACATAAAAGCTTGCTTTCATGTCTGTGGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR TCA 72 bp TCCCCAGAAAACCAATTTATGCAAAGGGCTGGATCCTaGCCGGCATTCTGCACTAAAGATCTGAATTACAAA +
Preference number: 3 (lower is better)
Translates to: SPENQFMQRAGS*PAFCTKDLNYK
Trigger: TTTGTAATTCAGATCTTTAGTGCAGAATGCCGGTCAGGATCCAGCCCTTTGCATAAATTGGTTTTCTGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR TCA 72 bp ACGGTAATGTGTGATAATGTATTATCCTTACTTCTGTaGAATTGTGGACTGCAACTTCTGCCGGGGCCAGTT +
Preference number: 3 (lower is better)
Translates to: TVMCDNVLSLLL*NCGLQLLPGPV
Trigger: AACTGGCCCCGGCAGAAGTTGCAGTCCACAATTTCACAGAAGTAAGGATAATACATTATCACACATTACCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR CCA 72 bp GGATGGAAACACAAACCAACCAACCTTATCTTCATTTaGAGGACTGAGAATCATAGAAGGCAACTGACTTGC +
Preference number: 3 (lower is better)
Translates to: GWKHKPTNLIFI*RTENHRRQLTC
Trigger: GCAAGTCAGTTGCCTTCTATGATTCTCAGTCCTCCAAATGAAGATAAGGTTGGTTGGTTTGTGTTTCCATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR-3UTR CAA 90 bp TCTCCCACAGACATGAAAGCAAGCTTTTATGTACTTAGGTTGGATTTCAACCTTCAGCTGGGGGCCATTTaGTCAAGAAGTGCTTATTTG +
Preference number: 3 (lower is better)
Translates to: SPTDMKASFYVLRLDFNLQLGAI*SRSAYL
Trigger: CAAATAAGCACTTCTTGACAAAATGGCCCCCAGCTG...AAGGTTGAAATCCAACCTAAGTACATAAAAGCTTGCTTTCATGTCTGTGGGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR-3UTR CAA 90 bp ATTTCCTCATTATCGTTGTTAGCTGGAAGAGAGTCTCAGAGAATCAAAGCCAAAATTATTAGCCCATTGTaGAGGGAGGACACTCAGAGT +
Preference number: 3 (lower is better)
Translates to: ISSLSLLAGRESQRIKAKIISPL*REDTQS
Trigger: ACTCTGAGTGTCCTCCCTCAACAATGGGCTAATAAT...TTTGGCTTTGATTCTCTGAGACTCTCTTCCAGCTAACAACGATAATGAGGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR-3UTR CAA 90 bp TCCTTGAGCTTCTTCCAAGATAGAGCAGATAAGGATGGAAACACAAACCAACCAATTTTGGTTTCTATTTaGTTATGTGCCTCCTTCTCC +
Preference number: 3 (lower is better)
Translates to: SLSFFQDRADKDGNTNQPILVSI*LCASFS
Trigger: GGAGAAGGAGGCACATAACAAAATAGAAACCAAAAT...TGGTTGGTTTGTGTTTCCATCCTTATCTGCTCTATCTTGGAAGAAGCTCAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR TCA 72 bp GGATGGGCCAGTAAGGATTACTTAAATGCATTGCAATaGCACCAACTGAAACGTTTTGCAATCACACAATCT +
Preference number: 3 (lower is better)
Translates to: GWASKDYLNALQ*HQLKRFAITQS
Trigger: AGATTGTGTGATTGCAAAACGTTTCAGTTGGTGTCATTGCAATGCATTTAAGTAATCCTTACTGGCCCATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR TCA 72 bp CTCACAGATAACTCAGGTCACTTAGTGAATATTAGTTaGATTGCTTTTGTATTAGATCCTACCTGCAGCCAA +
Preference number: 3 (lower is better)
Translates to: LTDNSGHLVNIS*IAFVLDPTCSQ
Trigger: TTGGCTGCAGGTAGGATCTAATACAAAAGCAATTCAACTAATATTCACTAAGTGACCTGAGTTATCTGTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR CCA 72 bp TATGAAACGATACATTTCCTCATTATCGTTGTTAGCTaGAAGAGAGTCTCAGAGAATCAAAGCCAAAGATGT +
Preference number: 3 (lower is better)
Translates to: YETIHFLIIVVS*KRVSENQSQRC
Trigger: ACATCTTTGGCTTTGATTCTCTGAGACTCTCTTCCAGCTAACAACGATAATGAGGAAATGTATCGTTTCATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR-3UTR CAA 90 bp CTTACAAGGACCCTATTTGAAAAACAACGCTTATTCATTCCTTTTTCTATACCCCATCTTTACTGTTATTaGCCAGAAAAGACTGGACCA +
Preference number: 3 (lower is better)
Translates to: LTRTLFEKQRLFIPFSIPHLYCY*PEKTGP
Trigger: TGGTCCAGTCTTTTCTGGCAAATAACAGTAAAGATG...GGGTATAGAAAAAGGAATGAATAAGCGTTGTTTTTCAAATAGGGTCCTTGTAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR GCA 90 bp CGTGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCGTGCGTGCTGCCCAGTaGCTGGCTGTCGGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: RVWGGDGVRRTHLGGRRTVRAAQ*LAVGGA
Trigger: GGCTCCACCGACAGCCAGGCACTGGGCAGCACGCAC...GGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395961.7
CDS-3UTR CCA 90 bp TGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGAGAGGACCTTGTCTTaGGCCGGGGCGTGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: CLGRRWSKENTSWWQENLERTLS*AGACPG
Trigger: CCCAGGGCACGCCCCGGCCCAAGACAAGGTCCTCTC...CAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR GCA 90 bp TGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGACCCGGAGCTGCTCCTaGACAGGGTCCTGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: CLGRRWSKENTSWWQENLTRSCS*TGSWVS
Trigger: GGAGACCCAGGACCCTGTGCAGGAGCAGCTCCGGGT...CAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp CGTGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTCCTGCACAGGGTCCTaGGTCTCCAGTGCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: RVWGGDGVRRTHLGGRRTSCTGS*VSSACC
Trigger: GCAGCACGCACTGGAGACCCAGGACCCTGTGCAGGA...GGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp ACGCCCGGCCACCACTGCCATTTTCATCACTTAACCCGAACACATTCCTCTATTGAGAGGACCTTGTCTTaGGCCGGGGCGTGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: TPGHHCHFHHLTRTHSSIERTLS*AGACPG
Trigger: CCCAGGGCACGCCCCGGCCCAAGACAAGGTCCTCTC...AATAGAGGAATGTGTTCGGGTTAAGTGATGAAAATGGCAGTGGTGGCCGGGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp TTACTGCTGTGGGTGACGGGTGGCTCGGTCTTGCTGAGGACCCTTGAGAGAACAAGCTCCTACAGCCCCTaGAGAAAGCCACCGAGAGGA +
Preference number: 4 (lower is better)
Translates to: LLLWVTGGSVLLRTLERTSSYSP*RKPPRG
Trigger: TCCTCTCGGTGGCTTTCTCCAGGGGCTGTAGGAGCT...TGTTCTCTCAAGGGTCCTCAGCAAGACCGAGCCACCCGTCACCCACAGCAGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR TCA 90 bp TGGCACTGCTTTGGAAGGTGGGGGCCGTCATTACACAAATCCCATGGGTGTGAAGTCCCCATTCTGCAGTaGGTTCGTGTCCACCGTGGC +
Preference number: 4 (lower is better)
Translates to: WHCFGRWGPSLHKSHGCEVPILQ*VRVHRG
Trigger: GCCACGGTGGACACGAACTCACTGCAGAATGGGGAC...TTCACACCCATGGGATTTGTGTAATGACGGCCCCCACCTTCCAAAGCAGTGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR GCA 90 bp TGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGTGGGTCTCCAGTGCGTaGTGCCCAGTGCCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: CLGRRWSKENTSWWQENLWVSSA*CPVPGC
Trigger: ACAGCCAGGCACTGGGCAGCACGCACTGGAGACCCA...CAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR GCA 90 bp AAATTGGCAACCACCCAACACAGCCCGGGTTCTCCCTCCTTGAGATGTGAATTTGTCCTGGGTCTCCAGTaGGTGCTGCCCAGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: KLATTQHSPGSPSLRCEFVLGLQ*VLPSAW
Trigger: CCAGGCACTGGGCAGCACGCACTGGAGACCCAGGAC...AAATTCACATCTCAAGGAGGGAGAACCCGGGCTGTGTTGGGTGGTTGCCAATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR GCA 90 bp TTACTGCTGTGGGTGACGGGTGGCTCGGTCTTGCTGAGGACCCTTGAGAGAACAGGGACATCATCGGACTaGCCTGATAAGCCAGGAACC +
Preference number: 4 (lower is better)
Translates to: LLLWVTGGSVLLRTLERTGTSSD*PDKPGT
Trigger: GGTTCCTGGCTTATCAGGGCAGTCCGATGATGTCCC...TGTTCTCTCAAGGGTCCTCAGCAAGACCGAGCCACCCGTCACCCACAGCAGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR GCA 90 bp TGGCACTGCTTTGGAAGGTGGGGGCCGTCATTACACAAATCCCATGGGTGTGAACCGTGGCCTGCTCTGTaGACTGGGCTGGTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: WHCFGRWGPSLHKSHGCEPWPAL*TGLVLW
Trigger: CCAAAGAACCAGCCCAGTGCACAGAGCAGGCCACGG...TTCACACCCATGGGATTTGTGTAATGACGGCCCCCACCTTCCAAAGCAGTGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp TGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGGCCGGGGCGTGCCCTaGGGTTTTATCTGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: CLGRRWSKENTSWWQENLGRGVP*GFICVL
Trigger: CAGGACACAGATAAAACCCCAGGGCACGCCCCGGCC...CAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
3UTR CAA 72 bp GGGCAGGGCAGCCACAGCACCTACTGCCATGGCGACTaGGCCACCGTTATAAGTAGATGCAACTGTACAACC +
Preference number: 4 (lower is better)
Translates to: GQGSHSTYCHGD*ATVISRCNCTT
Trigger: GGTTGTACAGTTGCATCTACTTATAACGGTGGCCAAGTCGCCATGGCAGTAGGTGCTGTGGCTGCCCTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR TCA 90 bp GTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGACCCATTGCTCCTGCTaGGCCCCTGTGGGAGTATCT +
Preference number: 4 (lower is better)
Translates to: VWGGDGVRRTHLGGRRTWTHCSC*APVGVS
Trigger: AGATACTCCCACAGGGGCTCAGCAGGAGCAATGGGT...CCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR TCA 90 bp TGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGTCCCCATTCTGCAGTaGGTTCGTGTCCACCGTGGC +
Preference number: 4 (lower is better)
Translates to: CLGRRWSKENTSWWQENLVPILQ*VRVHRG
Trigger: GCCACGGTGGACACGAACTCACTGCAGAATGGGGAC...CAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR TCA 90 bp GTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGGTCAGACGGAACAGATaGAGCGAGCCCCTCAGCCAT +
Preference number: 4 (lower is better)
Translates to: VWGGDGVRRTHLGGRRTWVRRNR*SEPLSH
Trigger: ATGGCTGAGGGGCTCGCTTCATCTGTTCCGTCTGAC...CCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR TCA 90 bp TTACTGCTGTGGGTGACGGGTGGCTCGGTCTTGCTGAGGACCCTTGAGAGAACACAAAGGGCTGGATCCTaGCCGGCATTCTGCACTAAA +
Preference number: 4 (lower is better)
Translates to: LLLWVTGGSVLLRTLERTQRAGS*PAFCTK
Trigger: TTTAGTGCAGAATGCCGGTCAGGATCCAGCCCTTTG...TGTTCTCTCAAGGGTCCTCAGCAAGACCGAGCCACCCGTCACCCACAGCAGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp AAATTGGCAACCACCCAACACAGCCCGGGTTCTCCCTCCTTGAGATGTGAATTTTCCTGCACAGGGTCCTaGGTCTCCAGTGCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: KLATTQHSPGSPSLRCEFSCTGS*VSSACC
Trigger: GCAGCACGCACTGGAGACCCAGGACCCTGTGCAGGA...AAATTCACATCTCAAGGAGGGAGAACCCGGGCTGTGTTGGGTGGTTGCCAATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp GTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGGGTCGACACCACCACTaGAACCCCGTTCAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: VWGGDGVRRTHLGGRRTWGRHHH*NPVQSR
Trigger: TCTGCTCTGAACGGGGTTCCAGTGGTGGTGTCGACC...CCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp GGAGCGTGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGGGTCAGCTGAAGTGGTaGGTGACTTTTCAGCACCCG +
Preference number: 4 (lower is better)
Translates to: GACLGRRWSKENTSWWQEGQLKW*VTFQHP
Trigger: CGGGTGCTGAAAAGTCACCCACCACTTCAGCTGACC...CTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACACGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CCA 90 bp TGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGTGGCCAGAGGCAGAGAGGTaGGTCCTGATTTCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: WGGDGVRRTHLGGRRTWWPEAER*VLISPW
Trigger: CCAAGGAGAAATCAGGACCCACCTCTCTGCCTCTGG...CCACCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CCA 90 bp CGTGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCGCCTGCTCTGTGCACTaGGCTGGTTCTTTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: RVWGGDGVRRTHLGGRRTACSVH*AGSLAS
Trigger: GGAAGCCAAAGAACCAGCCCAGTGCACAGAGCAGGC...GGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CCA 90 bp TTACTGCTGTGGGTGACGGGTGGCTCGGTCTTGCTGAGGACCCTTGAGAGAACAAAAGTCACCGTCAGCTaGAACTGGAAGGGAGGTGTG +
Preference number: 4 (lower is better)
Translates to: LLLWVTGGSVLLRTLERTKVTVS*NWKGGV
Trigger: CACACCTCCCTTCCAGTTCCAGCTGACGGTGACTTT...TGTTCTCTCAAGGGTCCTCAGCAAGACCGAGCCACCCGTCACCCACAGCAGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR CAA 72 bp CCTGCCATTCTCTCTGTGGACCCTGGGCTCTTGCACTaGCTGTTCTTCTGGGAGCCCTTTTGTCCAACGCTT +
Preference number: 4 (lower is better)
Translates to: PAILSVDPGLLH*LFFWEPFCPTL
Trigger: AAGCGTTGGACAAAAGGGCTCCCAGAAGAACAGCAAGTGCAAGAGCCCAGGGTCCACAGAGAGAATGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR CAA 72 bp AGTATGTTACTGCTGTGGGTGACGGGTGGCTCGGTCTaGCTGAGGACCCTTGAGAGAACACAAAGACGACCC +
Preference number: 4 (lower is better)
Translates to: SMLLLWVTGGSV*LRTLERTQRRP
Trigger: GGGTCGTCTTTGTGTTCTCTCAAGGGTCCTCAGCAAGACCGAGCCACCCGTCACCCACAGCAGTAACATACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR TCA 90 bp ACGCCCGGCCACCACTGCCATTTTCATCACTTAACCCGAACACATTCCTCTATTGTCCCCATTCTGCAGTaGGTTCGTGTCCACCGTGGC +
Preference number: 4 (lower is better)
Translates to: TPGHHCHFHHLTRTHSSIVPILQ*VRVHRG
Trigger: GCCACGGTGGACACGAACTCACTGCAGAATGGGGAC...AATAGAGGAATGTGTTCGGGTTAAGTGATGAAAATGGCAGTGGTGGCCGGGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR TCA 90 bp TGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGTCAGACGGAACAGATaGAGCGAGCCCCTCAGCCAT +
Preference number: 4 (lower is better)
Translates to: CLGRRWSKENTSWWQENLVRRNR*SEPLSH
Trigger: ATGGCTGAGGGGCTCGCTTCATCTGTTCCGTCTGAC...CAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR GCA 90 bp GTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGGGGACATCATCGGACTaGCCTGATAAGCCAGGAACC +
Preference number: 4 (lower is better)
Translates to: VWGGDGVRRTHLGGRRTWGTSSD*PDKPGT
Trigger: GGTTCCTGGCTTATCAGGGCAGTCCGATGATGTCCC...CCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR GCA 90 bp TGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGTCACGGACTGTGTGTaGCCCGATGGGTTGCATCCT +
Preference number: 4 (lower is better)
Translates to: CLGRRWSKENTSWWQENLVTDCV*PDGLHP
Trigger: AGGATGCAACCCATCGGGGCACACACAGTCCGTGAC...CAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR GCA 90 bp TGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGTGGACGCCCGGCCACCACTaGCATTTTCATCACTTAACC +
Preference number: 4 (lower is better)
Translates to: WGGDGVRRTHLGGRRTWWTPGHH*HFHHLT
Trigger: GGTTAAGTGATGAAAATGGCAGTGGTGGCCGGGCGT...CCACCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR GCA 90 bp TGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGCAACTTCGGCTCACTaGAACCTCCACCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: CLGRRWSKENTSWWQENLATSAH*NLHLLG
Trigger: ACCCAGGAGGTGGAGGTTGCAGTGAGCCGAAGTTGC...CAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR GCA 90 bp TGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGTCGCCCAGGGTGGAGTaGAATGGTGCAACTTCGGCT +
Preference number: 4 (lower is better)
Translates to: CLGRRWSKENTSWWQENLSPRVE*NGATSA
Trigger: AGCCGAAGTTGCACCATTGCACTCCACCCTGGGCGA...CAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR GCA 90 bp CGTGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGCTCCCTGCACTTTaGTTCCTTGTGCAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: RVWGGDGVRRTHLGGRRTWLPAL*FLVQSL
Trigger: CAGGCTCTGCACAAGGAAGCAAAGTGCAGGGAGCCA...GGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395961.7
CDS-3UTR GCA 90 bp TTACTGCTGTGGGTGACGGGTGGCTCGGTCTTGCTGAGGACCCTTGAGAGAACACTGGGGCTATCCAGGTaGTTTTTCTTGGTGCCTCTA +
Preference number: 4 (lower is better)
Translates to: LLLWVTGGSVLLRTLERTLGLSR*FFLVPL
Trigger: TAGAGGCACCAAGAAAAAGCACCTGGATAGCCCCAG...TGTTCTCTCAAGGGTCCTCAGCAAGACCGAGCCACCCGTCACCCACAGCAGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR GCA 90 bp TGGCACTGCTTTGGAAGGTGGGGGCCGTCATTACACAAATCCCATGGGTGTGAACTGGGCTCTTGCACTTaGTGTTCTTCTGGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: WHCFGRWGPSLHKSHGCELGSCT*CSSGSP
Trigger: AGGGCTCCCAGAAGAACAGCAAGTGCAAGAGCCCAG...TTCACACCCATGGGATTTGTGTAATGACGGCCCCCACCTTCCAAAGCAGTGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp GTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGACGAGATTTAGCAGCTaGTGCCTCGGGTTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: VWGGDGVRRTHLGGRRTWTRFSS*CLGFGL
Trigger: GAGGCCAAACCCGAGGCACCAGCTGCTAAATCTCGT...CCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp TGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGTCTCCGGTACGTCCTaGTACAGGCCGAGAGAGCAT +
Preference number: 4 (lower is better)
Translates to: CLGRRWSKENTSWWQENLVSGTS*YRPREH
Trigger: ATGCTCTCTCGGCCTGTACCAGGACGTACCGGAGAC...CAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp GTGCCTTCCCCTGAGTCCCATGACACCCTGCATTTGCTTCTCTTACATTGTATTCAGGTGGGAGAAGCGTaGGATCCCTGGCGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: VPSPESHDTLHLLLLHCIQVGEA*DPWRQR
Trigger: TCTCTGCCGCCAGGGATCCCACGCTTCTCCCACCTG...AATACAATGTAAGAGAAGCAAATGCAGGGTGTCATGGGACTCAGGGGAAGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp ACGCCCGGCCACCACTGCCATTTTCATCACTTAACCCGAACACATTCCTCTATTTCCCCCTGTCTCAGGTaGGAGAAGCGTGGGATCCCT +
Preference number: 4 (lower is better)
Translates to: TPGHHCHFHHLTRTHSSISPCLR*EKRGIP
Trigger: AGGGATCCCACGCTTCTCCCACCTGAGACAGGGGGA...AATAGAGGAATGTGTTCGGGTTAAGTGATGAAAATGGCAGTGGTGGCCGGGCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp GGAGCGTGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAAAAGCTGGAGTCCTTaGGCTTGGAGGGAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: GACLGRRWSKENTSWWQEKSWSP*AWRELL
Trigger: GAGAAGCTCCCTCCAAGCCCAAGGACTCCAGCTTTT...CTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACACGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp TGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGTGGCTCTTGGCTTCCTGTTaGCTGTCACCTGGCACCTTT +
Preference number: 4 (lower is better)
Translates to: WGGDGVRRTHLGGRRTWWLLASC*LSPGTF
Trigger: AAAGGTGCCAGGTGACAGCCAACAGGAAGCCAAGAG...CCACCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp TGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGTGGTTCTTGCCAGCCCCTTaGGTCTCCTGGGATGTAAAG +
Preference number: 4 (lower is better)
Translates to: WGGDGVRRTHLGGRRTWWFLPAP*VSWDVK
Trigger: CTTTACATCCCAGGAGACCCAAGGGGCTGGCAAGAA...CCACCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CCA 90 bp GTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGCCAGAGGCAGAGAGGTaGGTCCTGATTTCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: VWGGDGVRRTHLGGRRTWPEAER*VLISPW
Trigger: CCAAGGAGAAATCAGGACCCACCTCTCTGCCTCTGG...CCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CCA 90 bp TTACTGCTGTGGGTGACGGGTGGCTCGGTCTTGCTGAGGACCCTTGAGAGAACATGCCAACTGGTCCGATaGATACTGGGTCTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: LLLWVTGGSVLLRTLERTCQLVR*ILGLFA
Trigger: TGCAAACAGACCCAGTATCCATCGGACCAGTTGGCA...TGTTCTCTCAAGGGTCCTCAGCAAGACCGAGCCACCCGTCACCCACAGCAGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp TTACTGCTGTGGGTGACGGGTGGCTCGGTCTTGCTGAGGACCCTTGAGAGAACATCTGCGGGTATGGAGTaGGGCTTGAGAGTTTGCATT +
Preference number: 4 (lower is better)
Translates to: LLLWVTGGSVLLRTLERTSAGME*GLRVCI
Trigger: AATGCAAACTCTCAAGCCCCACTCCATACCCGCAGA...TGTTCTCTCAAGGGTCCTCAGCAAGACCGAGCCACCCGTCACCCACAGCAGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR CAA 72 bp AAGCTACCTGCCATTCTCTCTGTGGACCCTGGGCTCTaGCACTTGCTGTTCTTCTGGGAGCCCTTTTGTCCA +
Preference number: 4 (lower is better)
Translates to: KLPAILSVDPGL*HLLFFWEPFCP
Trigger: TGGACAAAAGGGCTCCCAGAAGAACAGCAAGTGCAAGAGCCCAGGGTCCACAGAGAGAATGGCAGGTAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR TCA 90 bp TGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGCAGAGAGGTGGGTCCTaGTTTCTCCTTGGTGCCTTC +
Preference number: 4 (lower is better)
Translates to: CLGRRWSKENTSWWQENLQRGGS*FLLGAF
Trigger: GAAGGCACCAAGGAGAAATCAGGACCCACCTCTCTG...CAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR TCA 90 bp TGGCACTGCTTTGGAAGGTGGGGGCCGTCATTACACAAATCCCATGGGTGTGAAGTTCATCTCGGCTGCTaGCTTCTTGTCCTTCGAGGA +
Preference number: 4 (lower is better)
Translates to: WHCFGRWGPSLHKSHGCEVHLGC*LLVLRG
Trigger: TCCTCGAAGGACAAGAAGTCAGCAGCCGAGATGAAC...TTCACACCCATGGGATTTGTGTAATGACGGCCCCCACCTTCCAAAGCAGTGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR TCA 90 bp TGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGTGGTTTCTTCTGAGTGGGTaGTCCCTCCATCCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: WGGDGVRRTHLGGRRTWWFLLSG*SLHPLS
Trigger: TGAAAGGGGATGGAGGGATCACCCACTCAGAAGAAA...CCACCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395961.7
ENST00000422805.1
CDS-3UTR TCA 90 bp TGGCACTGCTTTGGAAGGTGGGGGCCGTCATTACACAAATCCCATGGGTGTGAAGCTGTTGATGCTCAGTaGAGTGGTAGCTCTACCTGG +
Preference number: 4 (lower is better)
Translates to: WHCFGRWGPSLHKSHGCEAVDAQ*SGSSTW
Trigger: CCAGGTAGAGCTACCACTTCACTGAGCATCAACAGC...TTCACACCCATGGGATTTGTGTAATGACGGCCCCCACCTTCCAAAGCAGTGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR TCA 90 bp TTACTGCTGTGGGTGACGGGTGGCTCGGTCTTGCTGAGGACCCTTGAGAGAACAGTGGCCTTCAGTCCATaGAAGAGAACACATCTGTTC +
Preference number: 4 (lower is better)
Translates to: LLLWVTGGSVLLRTLERTVAFSP*KRTHLF
Trigger: GAACAGATGTGTTCTCTTTCATGGACTGAAGGCCAC...TGTTCTCTCAAGGGTCCTCAGCAAGACCGAGCCACCCGTCACCCACAGCAGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR GCA 90 bp TCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGAGATGTCTCCAGTGCGTGCTaGCCAGTGCCTGGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: SFAGHQKNIYMERVWGGDVSSAC*PVPGCR
Trigger: CCGACAGCCAGGCACTGGGCAGCACGCACTGGAGAC...ATCTCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR GCA 90 bp CCATTTTCATCACTTAACCCGAACACATTCCTCTATTCCCTCCCTTTCCTGCTTACCCGGAGCTGCTCCTaGACAGGGTCCTGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: PFSSLNPNTFLYSLPFLLTRSCS*TGSWVS
Trigger: GGAGACCCAGGACCCTGTGCAGGAGCAGCTCCGGGT...AAGCAGGAAAGGGAGGGAATAGAGGAATGTGTTCGGGTTAAGTGATGAAAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR GCA 90 bp TGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGGGACATCATCGGACTaGCCTGATAAGCCAGGAACC +
Preference number: 4 (lower is better)
Translates to: CLGRRWSKENTSWWQENLGTSSD*PDKPGT
Trigger: GGTTCCTGGCTTATCAGGGCAGTCCGATGATGTCCC...CAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR GCA 90 bp TGGCACTGCTTTGGAAGGTGGGGGCCGTCATTACACAAATCCCATGGGTGTGAACTGGGAATCGTCCTTTaGAGTCTCCAGTCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: WHCFGRWGPSLHKSHGCELGIVL*SLQSFW
Trigger: CCAGAAGGACTGGAGACTGCAAAGGACGATTCCCAG...TTCACACCCATGGGATTTGTGTAATGACGGCCCCCACCTTCCAAAGCAGTGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR GCA 90 bp TGGCACTGCTTTGGAAGGTGGGGGCCGTCATTACACAAATCCCATGGGTGTGAACTCTGCTATAGCTGCTaGCTGGGAATCGTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: WHCFGRWGPSLHKSHGCELCYSC*LGIVLC
Trigger: GCAAAGGACGATTCCCAGGCAGCAGCTATAGCAGAG...TTCACACCCATGGGATTTGTGTAATGACGGCCCCCACCTTCCAAAGCAGTGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR GCA 90 bp TTACTGCTGTGGGTGACGGGTGGCTCGGTCTTGCTGAGGACCCTTGAGAGAACAATTCTCTGCTATAGCTaGTGCCTGGGAATCGTCCTT +
Preference number: 4 (lower is better)
Translates to: LLLWVTGGSVLLRTLERTILCYS*CLGIVL
Trigger: AAGGACGATTCCCAGGCAGCAGCTATAGCAGAGAAT...TGTTCTCTCAAGGGTCCTCAGCAAGACCGAGCCACCCGTCACCCACAGCAGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR GCA 90 bp GGAGCGTGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGTGTGCCCCGATGGGTTaGATCCTTTGGAATTCTTGC +
Preference number: 4 (lower is better)
Translates to: GACLGRRWSKENTSWWQECAPMG*ILWNSC
Trigger: GCAAGAATTCCAAAGGATGCAACCCATCGGGGCACA...CTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACACGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR GCA 90 bp GTGCCTTCCCCTGAGTCCCATGACACCCTGCATTTGCTTCTCTTACATTGTATTAAGCCCCCAAGGGACTaGTGCCGCTTCTCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: VPSPESHDTLHLLLLHCIKPPRD*CRFSGL
Trigger: GAGACCTGAGAAGCGGCAGCAGTCCCTTGGGGGCTT...AATACAATGTAAGAGAAGCAAATGCAGGGTGTCATGGGACTCAGGGGAAGGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR GCA 90 bp ACGCCCGGCCACCACTGCCATTTTCATCACTTAACCCGAACACATTCCTCTATTTCGCCCAGGGTGGAGTaGAATGGTGCAACTTCGGCT +
Preference number: 4 (lower is better)
Translates to: TPGHHCHFHHLTRTHSSISPRVE*NGATSA
Trigger: AGCCGAAGTTGCACCATTGCACTCCACCCTGGGCGA...AATAGAGGAATGTGTTCGGGTTAAGTGATGAAAATGGCAGTGGTGGCCGGGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR GCA 90 bp TGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGTGGGCCGCCCCCTTGTGTTaGAAAATAACCGTGCAACTT +
Preference number: 4 (lower is better)
Translates to: WGGDGVRRTHLGGRRTWWAAPLC*KITVQL
Trigger: AAGTTGCACGGTTATTTTGCAACACAAGGGGGCGGC...CCACCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR GCA 90 bp TGGCACTGCTTTGGAAGGTGGGGGCCGTCATTACACAAATCCCATGGGTGTGAAAAGGACCTCACTGGCTaGTGGGAACAACTGCCCTTT +
Preference number: 4 (lower is better)
Translates to: WHCFGRWGPSLHKSHGCEKDLTG*WEQLPF
Trigger: AAAGGGCAGTTGTTCCCAGCAGCCAGTGAGGTCCTT...TTCACACCCATGGGATTTGTGTAATGACGGCCCCCACCTTCCAAAGCAGTGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR GCA 90 bp TGGCACTGCTTTGGAAGGTGGGGGCCGTCATTACACAAATCCCATGGGTGTGAACTCCAAGACAACGAATaGAGGAAGGACCTCACTGGC +
Preference number: 4 (lower is better)
Translates to: WHCFGRWGPSLHKSHGCELQDNE*RKDLTG
Trigger: GCCAGTGAGGTCCTTCCTGCATTCGTTGTCTTGGAG...TTCACACCCATGGGATTTGTGTAATGACGGCCCCCACCTTCCAAAGCAGTGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp AAATTGGCAACCACCCAACACAGCCCGGGTTCTCCCTCCTTGAGATGTGAATTTCCTGCTGAGCCCCTGTaGGAGTATCTTCAGTCCCCT +
Preference number: 4 (lower is better)
Translates to: KLATTQHSPGSPSLRCEFPAEPL*EYLQSP
Trigger: AGGGGACTGAAGATACTCCCACAGGGGCTCAGCAGG...AAATTCACATCTCAAGGAGGGAGAACCCGGGCTGTGTTGGGTGGTTGCCAATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp AAATTGGCAACCACCCAACACAGCCCGGGTTCTCCCTCCTTGAGATGTGAATTTGGTCGACACCACCACTaGAACCCCGTTCAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: KLATTQHSPGSPSLRCEFGRHHH*NPVQSR
Trigger: TCTGCTCTGAACGGGGTTCCAGTGGTGGTGTCGACC...AAATTCACATCTCAAGGAGGGAGAACCCGGGCTGTGTTGGGTGGTTGCCAATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp GTGCCTTCCCCTGAGTCCCATGACACCCTGCATTTGCTTCTCTTACATTGTATTTCCCCCTGTCTCAGGTaGGAGAAGCGTGGGATCCCT +
Preference number: 4 (lower is better)
Translates to: VPSPESHDTLHLLLLHCISPCLR*EKRGIP
Trigger: AGGGATCCCACGCTTCTCCCACCTGAGACAGGGGGA...AATACAATGTAAGAGAAGCAAATGCAGGGTGTCATGGGACTCAGGGGAAGGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp CGTGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCGCCCCTTGGGTCTCCTaGGATGTAAAGTTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: RVWGGDGVRRTHLGGRRTAPWVS*DVKLAL
Trigger: CAAAGCCAACTTTACATCCCAGGAGACCCAAGGGGC...GGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CCA 90 bp GTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGTTCTTGCCAGCCCCTTaGGTCTCCTGGGATGTAAAG +
Preference number: 4 (lower is better)
Translates to: VWGGDGVRRTHLGGRRTWFLPAP*VSWDVK
Trigger: CTTTACATCCCAGGAGACCCAAGGGGCTGGCAAGAA...CCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CCA 90 bp TGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGTGGACTGGGCTGGTTCTTTaGCTTCCTGCTTGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: WGGDGVRRTHLGGRRTWWTGLVL*LPACCS
Trigger: AGAGCAACAAGCAGGAAGCCAAAGAACCAGCCCAGT...CCACCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CCA 90 bp GGAGCGTGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGTGGTCCGATGGATACTaGGTCTGTTTGCACTTGAGC +
Preference number: 4 (lower is better)
Translates to: GACLGRRWSKENTSWWQEWSDGY*VCLHLS
Trigger: GCTCAAGTGCAAACAGACCCAGTATCCATCGGACCA...CTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACACGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CCA 90 bp CGTGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCGAGAACACATCTTGGTaGCAGGAGAACCTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: RVWGGDGVRRTHLGGRRTENTSW*QENLVG
Trigger: TCCCACCAGGTTCTCCTGCCACCAAGATGTGTTCTC...GGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CCA 90 bp CTCCCTTCTTCAAGCTTAGAGGATAAGCACGCATTTACTACAACGCTTAATTCCGTGCTGCCCAGTGCCTaGCTGTCGGTGGAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: LPSSSLEDKHAFTTTLNSVLPSA*LSVEPG
Trigger: GCCAGGCTCCACCGACAGCCAGGCACTGGGCAGCAC...GGAATTAAGCGTTGTAGTAAATGCGTGCTTATCCTCTAAGCTTGAAGAAGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395961.7
CDS-3UTR CCA 90 bp GGAGCGTGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGGTGGAGTCTGATGTTTaGCAGCTGGAGTCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: GACLGRRWSKENTSWWQEVESDV*QLESFP
Trigger: TGGGAAAGACTCCAGCTGCCAAACATCAGACTCCAC...CTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACACGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CCA 90 bp TGGCACTGCTTTGGAAGGTGGGGGCCGTCATTACACAAATCCCATGGGTGTGAAGGTCAGCTGAAGTGGTaGGTGACTTTTCAGCACCCT +
Preference number: 4 (lower is better)
Translates to: WHCFGRWGPSLHKSHGCEGQLKW*VTFQHP
Trigger: AGGGTGCTGAAAAGTCACCCACCACTTCAGCTGACC...TTCACACCCATGGGATTTGTGTAATGACGGCCCCCACCTTCCAAAGCAGTGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp TTACTGCTGTGGGTGACGGGTGGCTCGGTCTTGCTGAGGACCCTTGAGAGAACAACTTCCCTGTGTACTTaGATTTGCCAACTGGTCCGA +
Preference number: 4 (lower is better)
Translates to: LLLWVTGGSVLLRTLERTTSLCT*ICQLVR
Trigger: TCGGACCAGTTGGCAAATCCAAGTACACAGGGAAGT...TGTTCTCTCAAGGGTCCTCAGCAAGACCGAGCCACCCGTCACCCACAGCAGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR CAA 72 bp CCTTTTTCTATACCCCACACATTCCGTTCTAGGAAATaGGCAACCACCCAACACAGCCCGGGTTCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: PFSIPHTFRSRK*ATTQHSPGSPS
Trigger: GGAGGGAGAACCCGGGCTGTGTTGGGTGGTTGCCAATTTCCTAGAACGGAATGTGTGGGGTATAGAAAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR TCA 90 bp GTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGTTTCTTCTGAGTGGGTaGTCCCTCCATCCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: VWGGDGVRRTHLGGRRTWFLLSG*SLHPLS
Trigger: TGAAAGGGGATGGAGGGATCACCCACTCAGAAGAAA...CCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395961.7
ENST00000422805.1
CDS-3UTR TCA 90 bp GGAGCGTGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGCCCATTTATTTCTTCTaGGTGGGTGATCCCTCCATC +
Preference number: 4 (lower is better)
Translates to: GACLGRRWSKENTSWWQEPIYFF*VGDPSI
Trigger: GATGGAGGGATCACCCACTCAGAAGAAATAAATGGG...CTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACACGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395961.7
ENST00000422805.1
CDS-3UTR TCA 90 bp TGGCACTGCTTTGGAAGGTGGGGGCCGTCATTACACAAATCCCATGGGTGTGAAATCTCGGATGTCTTCTaGCCAGCTTGTCCATCACAG +
Preference number: 4 (lower is better)
Translates to: WHCFGRWGPSLHKSHGCEISDVF*PACPSQ
Trigger: CTGTGATGGACAAGCTGGTCAGAAGACATCCGAGAT...TTCACACCCATGGGATTTGTGTAATGACGGCCCCCACCTTCCAAAGCAGTGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR TCA 90 bp TTACTGCTGTGGGTGACGGGTGGCTCGGTCTTGCTGAGGACCCTTGAGAGAACACTGGGATCATGGGTATaGATCATCTGGGTGAATGAT +
Preference number: 4 (lower is better)
Translates to: LLLWVTGGSVLLRTLERTLGSWV*IIWVND
Trigger: ATCATTCACCCAGATGATTCATACCCATGATCCCAG...TGTTCTCTCAAGGGTCCTCAGCAAGACCGAGCCACCCGTCACCCACAGCAGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR GCA 90 bp CTCCCTTCTTCAAGCTTAGAGGATAAGCACGCATTTACTACAACGCTTAATTCCGTCTCCAGTGCGTGCTaGCCAGTGCCTGGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: LPSSSLEDKHAFTTTLNSVSSAC*PVPGCR
Trigger: CCGACAGCCAGGCACTGGGCAGCACGCACTGGAGAC...GGAATTAAGCGTTGTAGTAAATGCGTGCTTATCCTCTAAGCTTGAAGAAGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR GCA 90 bp GTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGAGATTTAGCAGCTGGTaGCTCGGGTTTGGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: VWGGDGVRRTHLGGRRTWRFSSW*LGFGLF
Trigger: AAAGAGGCCAAACCCGAGGCACCAGCTGCTAAATCT...CCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR GCA 90 bp AATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGCTGCCCCGGTCCAGCTaGCACCGGAAGTGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: NFICWPSEEYIHGACLGRLPRSS*HRKCPA
Trigger: AGCTGGACACTTCCGGTGGCAGCTGGACCGGGGCAG...CCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR GCA 90 bp ATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGACTGCCCCGGTCCAGCTaGCACCGGAAGTGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: ISFAGHQKNIYMERVWGGLPRSS*HRKCPA
Trigger: AGCTGGACACTTCCGGTGGCAGCTGGACCGGGGCAG...TCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR GCA 90 bp TGGCACTGCTTTGGAAGGTGGGGGCCGTCATTACACAAATCCCATGGGTGTGAACTTGTCTTGATGCTCTaGCCTCTTGGCTTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: WHCFGRWGPSLHKSHGCELVLML*PLGFLL
Trigger: CAACAGGAAGCCAAGAGGGCAGAGCATCAAGACAAG...TTCACACCCATGGGATTTGTGTAATGACGGCCCCCACCTTCCAAAGCAGTGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR GCA 90 bp GTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGATCCTTTGGAATTCTTaGCAGCCCCTTGGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: VWGGDGVRRTHLGGRRTWILWNS*QPLGSP
Trigger: AGGAGACCCAAGGGGCTGGCAAGAATTCCAAAGGAT...CCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR GCA 90 bp CGTGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGTGCCCCGATGGGTTaGATCCTTTGGAATTCTTGC +
Preference number: 4 (lower is better)
Translates to: RVWGGDGVRRTHLGGRRTCAPMG*ILWNSC
Trigger: GCAAGAATTCCAAAGGATGCAACCCATCGGGGCACA...GGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR GCA 90 bp TGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGTGGGGTTCTTTGGCTTCCTaGTTGTTGCTCTTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: WGGDGVRRTHLGGRRTWWGSLAS*LLLFCL
Trigger: CAAGCAGAAGAGCAACAAGCAGGAAGCCAAAGAACC...CCACCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR GCA 90 bp TGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGAGCTTGTCCCCATTCTaGAGTGAGTTCGTGTCCACC +
Preference number: 4 (lower is better)
Translates to: CLGRRWSKENTSWWQENLSLSPF*SEFVST
Trigger: GGTGGACACGAACTCACTGCAGAATGGGGACAAGCT...CAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR GCA 90 bp AAATTGGCAACCACCCAACACAGCCCGGGTTCTCCCTCCTTGAGATGTGAATTTTGGAGCCTGGCTCCCTaGACTTTGCTTCCTTGTGCA +
Preference number: 4 (lower is better)
Translates to: KLATTQHSPGSPSLRCEFWSLAP*TLLPCA
Trigger: TGCACAAGGAAGCAAAGTGCAGGGAGCCAGGCTCCA...AAATTCACATCTCAAGGAGGGAGAACCCGGGCTGTGTTGGGTGGTTGCCAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395961.7
CDS-3UTR GCA 90 bp GTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGTTCTGTGGGTTCAGGTaGAGCATCTCCTTCGTTGAG +
Preference number: 4 (lower is better)
Translates to: VWGGDGVRRTHLGGRRTWFCGFR*SISFVE
Trigger: CTCAACGAAGGAGATGCTGCACCTGAACCCACAGAA...CCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395961.7
CDS-3UTR GCA 90 bp TTACTGCTGTGGGTGACGGGTGGCTCGGTCTTGCTGAGGACCCTTGAGAGAACAATCACAGACACTTTCTaGTTTCGATGCCGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: LLLWVTGGSVLLRTLERTITDTF*FRCRVF
Trigger: GAAGACACGGCATCGAAAGCAGAAAGTGTCTGTGAT...TGTTCTCTCAAGGGTCCTCAGCAAGACCGAGCCACCCGTCACCCACAGCAGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp GGAGCGTGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGTGGGTCTTTGTTCGCTaGAGCTTTATTGGAGCTGAC +
Preference number: 4 (lower is better)
Translates to: GACLGRRWSKENTSWWQEWVFVR*SFIGAD
Trigger: GTCAGCTCCAATAAAGCTCCAGCGAACAAAGACCCA...CTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACACGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp GAATTCTTTTATGGTTACCAGTCAAAAAGTCACCGTCAGCTGGAACTGGAAGGGGGCCGGGGCGTGCCCTaGGGTTTTATCTGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: EFFYGYQSKSHRQLELEGGRGVP*GFICVL
Trigger: CAGGACACAGATAAAACCCCAGGGCACGCCCCGGCC...CCCTTCCAGTTCCAGCTGACGGTGACTTTTTGACTGGTAACCATAAAAGAATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp GTGCCTTCCCCTGAGTCCCATGACACCCTGCATTTGCTTCTCTTACATTGTATTTGGAGTCCTTGGGCTTaGAGGGAGCTTCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: VPSPESHDTLHLLLLHCIWSPWA*RELLLL
Trigger: CAGGAGGAGAAGCTCCCTCCAAGCCCAAGGACTCCA...AATACAATGTAAGAGAAGCAAATGCAGGGTGTCATGGGACTCAGGGGAAGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp TGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGAAAAGCTGGAGTCCTTaGGCTTGGAGGGAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: CLGRRWSKENTSWWQENLKSWSP*AWRELL
Trigger: GAGAAGCTCCCTCCAAGCCCAAGGACTCCAGCTTTT...CAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp TGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGCCCCTTGGGTCTCCTaGGATGTAAAGTTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: CLGRRWSKENTSWWQENLAPWVS*DVKLAL
Trigger: CAAAGCCAACTTTACATCCCAGGAGACCCAAGGGGC...CAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CCA 90 bp TGGCACTGCTTTGGAAGGTGGGGGCCGTCATTACACAAATCCCATGGGTGTGAACTGTGTGTGCCCCGATaGGTTGCATCCTTTGGAATT +
Preference number: 4 (lower is better)
Translates to: WHCFGRWGPSLHKSHGCELCVPR*VASFGI
Trigger: AATTCCAAAGGATGCAACCCATCGGGGCACACACAG...TTCACACCCATGGGATTTGTGTAATGACGGCCCCCACCTTCCAAAGCAGTGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp GTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGGTCCTGATTTCTCCTTaGTGCCTTCCTTCGCAGGTT +
Preference number: 4 (lower is better)
Translates to: VWGGDGVRRTHLGGRRTWVLISP*CLPSQV
Trigger: AACCTGCGAAGGAAGGCACCAAGGAGAAATCAGGAC...CCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CCA 90 bp GGAGCGTGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGTGTTGGTTCAGGCTCTaGCGGTGTGATAGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: GACLGRRWSKENTSWWQECWFRL*RCDSLF
Trigger: GAAAAGACTATCACACCGCCAGAGCCTGAACCAACA...CTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACACGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CCA 90 bp TGGCACTGCTTTGGAAGGTGGGGGCCGTCATTACACAAATCCCATGGGTGTGAACTCTTTACCCTTCTGTaGTGCTCCTGTTGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: WHCFGRWGPSLHKSHGCELFTLL*CSCWFR
Trigger: CCTGAACCAACAGGAGCACCACAGAAGGGTAAAGAG...TTCACACCCATGGGATTTGTGTAATGACGGCCCCCACCTTCCAAAGCAGTGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp GTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGTGCCAACTGGTCCGATaGATACTGGGTCTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: VWGGDGVRRTHLGGRRTWCQLVR*ILGLFA
Trigger: TGCAAACAGACCCAGTATCCATCGGACCAGTTGGCA...CCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CCA 90 bp CGTGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCCTTGGATTTGCCAACTaGTCCGATGGATACTGGGTC +
Preference number: 4 (lower is better)
Translates to: RVWGGDGVRRTHLGGRRTLGFAN*SDGYWV
Trigger: GACCCAGTATCCATCGGACCAGTTGGCAAATCCAAG...GGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CCA 90 bp GTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGCTTGGATTTGCCAACTaGTCCGATGGATACTGGGTC +
Preference number: 4 (lower is better)
Translates to: VWGGDGVRRTHLGGRRTWLGFAN*SDGYWV
Trigger: GACCCAGTATCCATCGGACCAGTTGGCAAATCCAAG...CCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CCA 90 bp GTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGAAGGAGAACACATCTTaGTGGCAGGAGAACCTGGTG +
Preference number: 4 (lower is better)
Translates to: VWGGDGVRRTHLGGRRTWKENTS*WQENLV
Trigger: CACCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTT...CCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CCA 90 bp CGTGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTCCGTTCTAGGAAATTaGCAACCACCCAACACAGCC +
Preference number: 4 (lower is better)
Translates to: RVWGGDGVRRTHLGGRRTSVLGN*QPPNTA
Trigger: GGCTGTGTTGGGTGGTTGCCAATTTCCTAGAACGGA...GGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp TTACTGCTGTGGGTGACGGGTGGCTCGGTCTTGCTGAGGACCCTTGAGAGAACACATAATCCCCTTGCCTaGAACTGCATCCATCATTCA +
Preference number: 4 (lower is better)
Translates to: LLLWVTGGSVLLRTLERTHNPLA*NCIHHS
Trigger: TGAATGATGGATGCAGTTCCAGGCAAGGGGATTATG...TGTTCTCTCAAGGGTCCTCAGCAAGACCGAGCCACCCGTCACCCACAGCAGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR TCA 90 bp GTGCCTTCCCCTGAGTCCCATGACACCCTGCATTTGCTTCTCTTACATTGTATTCAGAGAGGTGGGTCCTaGTTTCTCCTTGGTGCCTTC +
Preference number: 4 (lower is better)
Translates to: VPSPESHDTLHLLLLHCIQRGGS*FLLGAF
Trigger: GAAGGCACCAAGGAGAAATCAGGACCCACCTCTCTG...AATACAATGTAAGAGAAGCAAATGCAGGGTGTCATGGGACTCAGGGGAAGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR TCA 90 bp TGGCACTGCTTTGGAAGGTGGGGGCCGTCATTACACAAATCCCATGGGTGTGAAATGGAGAGGGTTGCGTaGATGCCATTCAAGAAAAGG +
Preference number: 4 (lower is better)
Translates to: WHCFGRWGPSLHKSHGCEMERVA*MPFKKR
Trigger: CCTTTTCTTGAATGGCATTCACGCAACCCTCTCCAT...TTCACACCCATGGGATTTGTGTAATGACGGCCCCCACCTTCCAAAGCAGTGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR TCA 90 bp TGGCACTGCTTTGGAAGGTGGGGGCCGTCATTACACAAATCCCATGGGTGTGAACCATCTTTCACTGATTaGGAATTGTCCTTCGGGGCA +
Preference number: 4 (lower is better)
Translates to: WHCFGRWGPSLHKSHGCEPSFTD*ELSFGA
Trigger: TGCCCCGAAGGACAATTCTCAATCAGTGAAAGATGG...TTCACACCCATGGGATTTGTGTAATGACGGCCCCCACCTTCCAAAGCAGTGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR GCA 90 bp GAATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGTGGGTCTCCAGTGCGTaGTGCCCAGTGCCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: EFHLLAIRRIYTWSVFGEWVSSA*CPVPGC
Trigger: ACAGCCAGGCACTGGGCAGCACGCACTGGAGACCCA...CTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR GCA 90 bp TGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGTGGGTCCTGGTAAGTCTCTaGTTCTGGTTCATTCTCTTG +
Preference number: 4 (lower is better)
Translates to: WGGDGVRRTHLGGRRTWWVLVSL*FWFILL
Trigger: CAAGAGAATGAACCAGAAGCAGAGACTTACCAGGAC...CCACCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR GCA 90 bp TGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGCTTGTCTTGATGCTCTaGCCTCTTGGCTTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: CLGRRWSKENTSWWQENLLVLML*PLGFLL
Trigger: CAACAGGAAGCCAAGAGGGCAGAGCATCAAGACAAG...CAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR GCA 90 bp ACGCCCGGCCACCACTGCCATTTTCATCACTTAACCCGAACACATTCCTCTATTCTGGGAATCGTCCTTTaGAGTCTCCAGTCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: TPGHHCHFHHLTRTHSSILGIVL*SLQSFW
Trigger: CCAGAAGGACTGGAGACTGCAAAGGACGATTCCCAG...AATAGAGGAATGTGTTCGGGTTAAGTGATGAAAATGGCAGTGGTGGCCGGGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR GCA 90 bp CGTGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCATTCTCTGCTATAGCTaGTGCCTGGGAATCGTCCTT +
Preference number: 4 (lower is better)
Translates to: RVWGGDGVRRTHLGGRRTILCYS*CLGIVL
Trigger: AAGGACGATTCCCAGGCAGCAGCTATAGCAGAGAAT...GGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR GCA 90 bp TGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGATCCTTTGGAATTCTTaGCAGCCCCTTGGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: CLGRRWSKENTSWWQENLILWNS*QPLGSP
Trigger: AGGAGACCCAAGGGGCTGGCAAGAATTCCAAAGGAT...CAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR GCA 90 bp CGTGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTTTTCCAAAACAGTTTaGCCAGAGGCAGAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: RVWGGDGVRRTHLGGRRTFSKTV*PEAERW
Trigger: CCACCTCTCTGCCTCTGGGCAAACTGTTTTGGAAAA...GGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR GCA 90 bp TCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGAGATCCGTGGCCTGCTCTGTaGACTGGGCTGGTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: SFAGHQKNIYMERVWGGDPWPAL*TGLVLW
Trigger: CCAAAGAACCAGCCCAGTGCACAGAGCAGGCCACGG...ATCTCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR GCA 90 bp CCATTTTCATCACTTAACCCGAACACATTCCTCTATTCCCTCCCTTTCCTGCTTAAGCCCCCAAGGGACTaGTGCCGCTTCTCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: PFSSLNPNTFLYSLPFLLKPPRD*CRFSGL
Trigger: GAGACCTGAGAAGCGGCAGCAGTCCCTTGGGGGCTT...AAGCAGGAAAGGGAGGGAATAGAGGAATGTGTTCGGGTTAAGTGATGAAAATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp GTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGTGGGGAACACTCATTTaGTTACCCATTGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: VWGGDGVRRTHLGGRRTWWGTLI*LPIAPA
Trigger: AGCAGGAGCAATGGGTAACCAAATGAGTGTTCCCCA...CCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp CTCCCTTCTTCAAGCTTAGAGGATAAGCACGCATTTACTACAACGCTTAATTCCGGCCGGGGCGTGCCCTaGGGTTTTATCTGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: LPSSSLEDKHAFTTTLNSGRGVP*GFICVL
Trigger: CAGGACACAGATAAAACCCCAGGGCACGCCCCGGCC...GGAATTAAGCGTTGTAGTAAATGCGTGCTTATCCTCTAAGCTTGAAGAAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp TCTCCCACAGACATGAAAGCAAGCTTTTATGTACTTAGGTTGGATTTCAACCTTGAGAGGACCTTGTCTTaGGCCGGGGCGTGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: SPTDMKASFYVLRLDFNLERTLS*AGACPG
Trigger: CCCAGGGCACGCCCCGGCCCAAGACAAGGTCCTCTC...AAGGTTGAAATCCAACCTAAGTACATAAAAGCTTGCTTTCATGTCTGTGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp CTCCCTTCTTCAAGCTTAGAGGATAAGCACGCATTTACTACAACGCTTAATTCCCAGGTGGGAGAAGCGTaGGATCCCTGGCGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: LPSSSLEDKHAFTTTLNSQVGEA*DPWRQR
Trigger: TCTCTGCCGCCAGGGATCCCACGCTTCTCCCACCTG...GGAATTAAGCGTTGTAGTAAATGCGTGCTTATCCTCTAAGCTTGAAGAAGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp AATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGCAGGTGGGAGAAGCGTaGGATCCCTGGCGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: NFICWPSEEYIHGACLGRQVGEA*DPWRQR
Trigger: TCTCTGCCGCCAGGGATCCCACGCTTCTCCCACCTG...CCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp TCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGAGATTCCCCCTGTCTCAGGTaGGAGAAGCGTGGGATCCCT +
Preference number: 4 (lower is better)
Translates to: SFAGHQKNIYMERVWGGDSPCLR*EKRGIP
Trigger: AGGGATCCCACGCTTCTCCCACCTGAGACAGGGGGA...ATCTCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp GTGCCTTCCCCTGAGTCCCATGACACCCTGCATTTGCTTCTCTTACATTGTATTGATGCTCTGCCCTCTTaGCTTCCTGTTGGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: VPSPESHDTLHLLLLHCIDALPS*LPVGCH
Trigger: GTGACAGCCAACAGGAAGCCAAGAGGGCAGAGCATC...AATACAATGTAAGAGAAGCAAATGCAGGGTGTCATGGGACTCAGGGGAAGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp AAATTGGCAACCACCCAACACAGCCCGGGTTCTCCCTCCTTGAGATGTGAATTTTTCTTGCCAGCCCCTTaGGTCTCCTGGGATGTAAAG +
Preference number: 4 (lower is better)
Translates to: KLATTQHSPGSPSLRCEFFLPAP*VSWDVK
Trigger: CTTTACATCCCAGGAGACCCAAGGGGCTGGCAAGAA...AAATTCACATCTCAAGGAGGGAGAACCCGGGCTGTGTTGGGTGGTTGCCAATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp GTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGATGGGTTGCATCCTTTaGAATTCTTGCCAGCCCCTT +
Preference number: 4 (lower is better)
Translates to: VWGGDGVRRTHLGGRRTWMGCIL*NSCQPL
Trigger: AAGGGGCTGGCAAGAATTCCAAAGGATGCAACCCAT...CCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CCA 90 bp TGGCACTGCTTTGGAAGGTGGGGGCCGTCATTACACAAATCCCATGGGTGTGAAATGGGTTGCATCCTTTaGAATTCTTGCCAGCCCCTT +
Preference number: 4 (lower is better)
Translates to: WHCFGRWGPSLHKSHGCEMGCIL*NSCQPL
Trigger: AAGGGGCTGGCAAGAATTCCAAAGGATGCAACCCAT...TTCACACCCATGGGATTTGTGTAATGACGGCCCCCACCTTCCAAAGCAGTGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp CCATTTTCATCACTTAACCCGAACACATTCCTCTATTCCCTCCCTTTCCTGCTTAGTTCGTGTCCACCGTaGCCTGCTCTGTGCACTGGG +
Preference number: 4 (lower is better)
Translates to: PFSSLNPNTFLYSLPFLLSSCPP*PALCTG
Trigger: CCCAGTGCACAGAGCAGGCCACGGTGGACACGAACT...AAGCAGGAAAGGGAGGGAATAGAGGAATGTGTTCGGGTTAAGTGATGAAAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp TGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGTGCCAACTGGTCCGATaGATACTGGGTCTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: CLGRRWSKENTSWWQENLCQLVR*ILGLFA
Trigger: TGCAAACAGACCCAGTATCCATCGGACCAGTTGGCA...CAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CCA 90 bp TGGCACTGCTTTGGAAGGTGGGGGCCGTCATTACACAAATCCCATGGGTGTGAATGGAACATGGCAGAATaGAGTGTCAGAGAACCAGAG +
Preference number: 4 (lower is better)
Translates to: WHCFGRWGPSLHKSHGCEWNMAE*SVREPE
Trigger: CTCTGGTTCTCTGACACTCCATTCTGCCATGTTCCA...TTCACACCCATGGGATTTGTGTAATGACGGCCCCCACCTTCCAAAGCAGTGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp TGGCACTGCTTTGGAAGGTGGGGGCCGTCATTACACAAATCCCATGGGTGTGAATCAACCCATGGAACATaGCAGAATGGAGTGTCAGAG +
Preference number: 4 (lower is better)
Translates to: WHCFGRWGPSLHKSHGCESTHGT*QNGVSE
Trigger: CTCTGACACTCCATTCTGCCATGTTCCATGGGTTGA...TTCACACCCATGGGATTTGTGTAATGACGGCCCCCACCTTCCAAAGCAGTGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR TCA 90 bp GTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGGAGCTTTATTGGAGCTaGCATCAAGCTTCACTGATC +
Preference number: 4 (lower is better)
Translates to: VWGGDGVRRTHLGGRRTWELYWS*HQASLI
Trigger: GATCAGTGAAGCTTGATGTCAGCTCCAATAAAGCTC...CCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR TCA 90 bp AATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGGTCCCCATTCTGCAGTaGGTTCGTGTCCACCGTGGC +
Preference number: 4 (lower is better)
Translates to: NFICWPSEEYIHGACLGRVPILQ*VRVHRG
Trigger: GCCACGGTGGACACGAACTCACTGCAGAATGGGGAC...CCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR TCA 90 bp ACGCCCGGCCACCACTGCCATTTTCATCACTTAACCCGAACACATTCCTCTATTGGGTCTGTTTGCACTTaGGCATCCAACATCCGCTTT +
Preference number: 4 (lower is better)
Translates to: TPGHHCHFHHLTRTHSSIGSVCT*ASNIRF
Trigger: AAAGCGGATGTTGGATGCTCAAGTGCAAACAGACCC...AATAGAGGAATGTGTTCGGGTTAAGTGATGAAAATGGCAGTGGTGGCCGGGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR TCA 90 bp GTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGCTTTGCCGTTGTCACTaGGCCTCAAAAGCAATTGTT +
Preference number: 4 (lower is better)
Translates to: VWGGDGVRRTHLGGRRTWLCRCH*ASKAIV
Trigger: AACAATTGCTTTTGAGGCTCAGTGACAACGGCAAAG...CCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR TCA 90 bp TGGCACTGCTTTGGAAGGTGGGGGCCGTCATTACACAAATCCCATGGGTGTGAATATGAATCATCTGGGTaGATGATGAGGCCAAATCCC +
Preference number: 4 (lower is better)
Translates to: WHCFGRWGPSLHKSHGCEYESSG*MMRPNP
Trigger: GGGATTTGGCCTCATCATTCACCCAGATGATTCATA...TTCACACCCATGGGATTTGTGTAATGACGGCCCCCACCTTCCAAAGCAGTGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR GCA 90 bp ACGCCCGGCCACCACTGCCATTTTCATCACTTAACCCGAACACATTCCTCTATTATCCTTTGGAATTCTTaGCAGCCCCTTGGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: TPGHHCHFHHLTRTHSSIILWNS*QPLGSP
Trigger: AGGAGACCCAAGGGGCTGGCAAGAATTCCAAAGGAT...AATAGAGGAATGTGTTCGGGTTAAGTGATGAAAATGGCAGTGGTGGCCGGGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR GCA 90 bp ACGCCCGGCCACCACTGCCATTTTCATCACTTAACCCGAACACATTCCTCTATTCTGATTTCTCCTTGGTaGCTTCCTTCGCAGGTTCAG +
Preference number: 4 (lower is better)
Translates to: TPGHHCHFHHLTRTHSSILISPW*LPSQVQ
Trigger: CTGAACCTGCGAAGGAAGGCACCAAGGAGAAATCAG...AATAGAGGAATGTGTTCGGGTTAAGTGATGAAAATGGCAGTGGTGGCCGGGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR GCA 90 bp ATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGACCGTGGCCTGCTCTGTaGACTGGGCTGGTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: ISFAGHQKNIYMERVWGGPWPAL*TGLVLW
Trigger: CCAAAGAACCAGCCCAGTGCACAGAGCAGGCCACGG...TCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR GCA 90 bp GAATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGAAGCCCCCAAGGGACTaGTGCCGCTTCTCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: EFHLLAIRRIYTWSVFGEKPPRD*CRFSGL
Trigger: GAGACCTGAGAAGCGGCAGCAGTCCCTTGGGGGCTT...CTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CCA 90 bp TCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGAGATTGGAGTCCTTGGGCTTaGAGGGAGCTTCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: SFAGHQKNIYMERVWGGDWSPWA*RELLLL
Trigger: CAGGAGGAGAAGCTCCCTCCAAGCCCAAGGACTCCA...ATCTCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp GTGCCTTCCCCTGAGTCCCATGACACCCTGCATTTGCTTCTCTTACATTGTATTCTGTTGGCTGTCACCTaGCACCTTTTCCTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: VPSPESHDTLHLLLLHCILLAVT*HLFLSL
Trigger: AAGGGACAGGAAAAGGTGCCAGGTGACAGCCAACAG...AATACAATGTAAGAGAAGCAAATGCAGGGTGTCATGGGACTCAGGGGAAGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp GTGCCTTCCCCTGAGTCCCATGACACCCTGCATTTGCTTCTCTTACATTGTATTTTCTTGCCAGCCCCTTaGGTCTCCTGGGATGTAAAG +
Preference number: 4 (lower is better)
Translates to: VPSPESHDTLHLLLLHCIFLPAP*VSWDVK
Trigger: CTTTACATCCCAGGAGACCCAAGGGGCTGGCAAGAA...AATACAATGTAAGAGAAGCAAATGCAGGGTGTCATGGGACTCAGGGGAAGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp TGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGATGGGTTGCATCCTTTaGAATTCTTGCCAGCCCCTT +
Preference number: 4 (lower is better)
Translates to: CLGRRWSKENTSWWQENLMGCIL*NSCQPL
Trigger: AAGGGGCTGGCAAGAATTCCAAAGGATGCAACCCAT...CAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CCA 90 bp TCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGAGATCTGTGGTGCTCCTGTTaGTTCAGGCTCTGGCGGTGT +
Preference number: 4 (lower is better)
Translates to: SFAGHQKNIYMERVWGGDLWCSC*FRLWRC
Trigger: ACACCGCCAGAGCCTGAACCAACAGGAGCACCACAG...ATCTCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CCA 90 bp TTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGAGCTGTGGTGCTCCTGTTaGTTCAGGCTCTGGCGGTGT +
Preference number: 4 (lower is better)
Translates to: FHLLAIRRIYTWSVFGEELWCSC*FRLWRC
Trigger: ACACCGCCAGAGCCTGAACCAACAGGAGCACCACAG...CTCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CCA 90 bp TTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGAGGCCTGCTCTGTGCACTaGGCTGGTTCTTTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: FHLLAIRRIYTWSVFGEEACSVH*AGSLAS
Trigger: GGAAGCCAAAGAACCAGCCCAGTGCACAGAGCAGGC...CTCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CCA 90 bp GAATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGAGTTCGTGTCCACCGTaGCCTGCTCTGTGCACTGGG +
Preference number: 4 (lower is better)
Translates to: EFHLLAIRRIYTWSVFGESSCPP*PALCTG
Trigger: CCCAGTGCACAGAGCAGGCCACGGTGGACACGAACT...CTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CCA 90 bp TGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGTTCTCAGGTCTCTTTTaGAGCTTGTCCCCATTCTGC +
Preference number: 4 (lower is better)
Translates to: CLGRRWSKENTSWWQENLFSGLF*SLSPFC
Trigger: GCAGAATGGGGACAAGCTCCAAAAGAGACCTGAGAA...CAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CCA 90 bp GTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGATCCAACATCCGCTTTaGTCCCAGGCCTTTAAAGAA +
Preference number: 4 (lower is better)
Translates to: VWGGDGVRRTHLGGRRTWIQHPL*SQAFKE
Trigger: TTCTTTAAAGGCCTGGGACCAAAGCGGATGTTGGAT...CCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CCA 90 bp GGAGCGTGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAGAAGAATATATACATaGAGCGTGTTTGGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: GACLGRRWSKENTSWWQERRIYT*SVFGEE
Trigger: CTCCTCCCCAAACACGCTCCATGTATATATTCTTCT...CTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACACGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CCA 90 bp TGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGTGGAGAAGAATATATACATaGAGCGTGTTTGGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: WGGDGVRRTHLGGRRTWWRRIYT*SVFGEE
Trigger: CTCCTCCCCAAACACGCTCCATGTATATATTCTTCT...CCACCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CCA 90 bp GAATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGCTGTCGGTGGAGCCTaGCTCCCTGCACTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: EFHLLAIRRIYTWSVFGEAVGGA*LPALCF
Trigger: GAAGCAAAGTGCAGGGAGCCAGGCTCCACCGACAGC...CTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395961.7
CDS-3UTR CCA 90 bp GTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGTTTATTTCTTCTGAGTaGGTGATCCCTCCATCCCCT +
Preference number: 4 (lower is better)
Translates to: VWGGDGVRRTHLGGRRTWFISSE*VIPPSP
Trigger: AGGGGATGGAGGGATCACCCACTCAGAAGAAATAAA...CCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CCA 90 bp TGGCACTGCTTTGGAAGGTGGGGGCCGTCATTACACAAATCCCATGGGTGTGAATTCAGGGCCAGTCTTTaGACCAAACATGCTGTTGAT +
Preference number: 4 (lower is better)
Translates to: WHCFGRWGPSLHKSHGCEFRASL*TKHAVD
Trigger: ATCAACAGCATGTTTGGTCCAAAGACTGGCCCTGAA...TTCACACCCATGGGATTTGTGTAATGACGGCCCCCACCTTCCAAAGCAGTGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR TCA 90 bp AATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGACCCATTGCTCCTGCTaGGCCCCTGTGGGAGTATCT +
Preference number: 4 (lower is better)
Translates to: NFICWPSEEYIHGACLGRTHCSC*APVGVS
Trigger: AGATACTCCCACAGGGGCTCAGCAGGAGCAATGGGT...CCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR TCA 90 bp CCATTTTCATCACTTAACCCGAACACATTCCTCTATTCCCTCCCTTTCCTGCTTCAGAGAGGTGGGTCCTaGTTTCTCCTTGGTGCCTTC +
Preference number: 4 (lower is better)
Translates to: PFSSLNPNTFLYSLPFLLQRGGS*FLLGAF
Trigger: GAAGGCACCAAGGAGAAATCAGGACCCACCTCTCTG...AAGCAGGAAAGGGAGGGAATAGAGGAATGTGTTCGGGTTAAGTGATGAAAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR TCA 90 bp TGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGTCTGACCCAACTAGGTaGCCTGCTAAACCATCTTTA +
Preference number: 4 (lower is better)
Translates to: CLGRRWSKENTSWWQENLSDPTR*PAKPSL
Trigger: TAAAGATGGTTTAGCAGGTCACCTAGTTGGGTCAGA...CAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR TCA 90 bp TGGCACTGCTTTGGAAGGTGGGGGCCGTCATTACACAAATCCCATGGGTGTGAATGCAATGACACCAACTaGAACGTTTTGCAATCACAC +
Preference number: 4 (lower is better)
Translates to: WHCFGRWGPSLHKSHGCECNDTN*NVLQSH
Trigger: GTGTGATTGCAAAACGTTTCAGTTGGTGTCATTGCA...TTCACACCCATGGGATTTGTGTAATGACGGCCCCCACCTTCCAAAGCAGTGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR TCA 90 bp TGGCACTGCTTTGGAAGGTGGGGGCCGTCATTACACAAATCCCATGGGTGTGAATCTCTCCCACAGACATaGAAGCAAGCTTTTATGTAC +
Preference number: 4 (lower is better)
Translates to: WHCFGRWGPSLHKSHGCESLPQT*KQAFMY
Trigger: GTACATAAAAGCTTGCTTTCATGTCTGTGGGAGAGA...TTCACACCCATGGGATTTGTGTAATGACGGCCCCCACCTTCCAAAGCAGTGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR TCA 90 bp TGGCACTGCTTTGGAAGGTGGGGGCCGTCATTACACAAATCCCATGGGTGTGAAAGTTTATTTGGGAAGTaGTCCCAGGAAGCACAAAAG +
Preference number: 4 (lower is better)
Translates to: WHCFGRWGPSLHKSHGCESLFGK*SQEAQK
Trigger: CTTTTGTGCTTCCTGGGATCACTTCCCAAATAAACT...TTCACACCCATGGGATTTGTGTAATGACGGCCCCCACCTTCCAAAGCAGTGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR GCA 90 bp GTGCCTTCCCCTGAGTCCCATGACACCCTGCATTTGCTTCTCTTACATTGTATTCTGATTTCTCCTTGGTaGCTTCCTTCGCAGGTTCAG +
Preference number: 4 (lower is better)
Translates to: VPSPESHDTLHLLLLHCILISPW*LPSQVQ
Trigger: CTGAACCTGCGAAGGAAGGCACCAAGGAGAAATCAG...AATACAATGTAAGAGAAGCAAATGCAGGGTGTCATGGGACTCAGGGGAAGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp ATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGACCTGCTGAGCCCCTGTaGGAGTATCTTCAGTCCCCT +
Preference number: 4 (lower is better)
Translates to: ISFAGHQKNIYMERVWGGPAEPL*EYLQSP
Trigger: AGGGGACTGAAGATACTCCCACAGGGGCTCAGCAGG...TCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp CCATTTTCATCACTTAACCCGAACACATTCCTCTATTCCCTCCCTTTCCTGCTTACGAGATTTAGCAGCTaGTGCCTCGGGTTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: PFSSLNPNTFLYSLPFLLTRFSS*CLGFGL
Trigger: GAGGCCAAACCCGAGGCACCAGCTGCTAAATCTCGT...AAGCAGGAAAGGGAGGGAATAGAGGAATGTGTTCGGGTTAAGTGATGAAAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp TTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGAGGATGAATCTGCGGCTTaGTCTCCGGTACGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: FHLLAIRRIYTWSVFGEEDESAA*SPVRPG
Trigger: ACCAGGACGTACCGGAGACCAAGCCGCAGATTCATC...CTCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp TTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGAGGATGCTCTGCCCTCTTaGCTTCCTGTTGGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: FHLLAIRRIYTWSVFGEEDALPS*LPVGCH
Trigger: GTGACAGCCAACAGGAAGCCAAGAGGGCAGAGCATC...CTCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp CCATTTTCATCACTTAACCCGAACACATTCCTCTATTCCCTCCCTTTCCTGCTTGGTCAGCTGAAGTGGTaGGTGACTTTTCAGCACCCG +
Preference number: 4 (lower is better)
Translates to: PFSSLNPNTFLYSLPFLLGQLKW*VTFQHP
Trigger: CGGGTGCTGAAAAGTCACCCACCACTTCAGCTGACC...AAGCAGGAAAGGGAGGGAATAGAGGAATGTGTTCGGGTTAAGTGATGAAAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp AAATTGGCAACCACCCAACACAGCCCGGGTTCTCCCTCCTTGAGATGTGAATTTATGGGTTGCATCCTTTaGAATTCTTGCCAGCCCCTT +
Preference number: 4 (lower is better)
Translates to: KLATTQHSPGSPSLRCEFMGCIL*NSCQPL
Trigger: AAGGGGCTGGCAAGAATTCCAAAGGATGCAACCCAT...AAATTCACATCTCAAGGAGGGAGAACCCGGGCTGTGTTGGGTGGTTGCCAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp GTGCCTTCCCCTGAGTCCCATGACACCCTGCATTTGCTTCTCTTACATTGTATTGTCCTGATTTCTCCTTaGTGCCTTCCTTCGCAGGTT +
Preference number: 4 (lower is better)
Translates to: VPSPESHDTLHLLLLHCIVLISP*CLPSQV
Trigger: AACCTGCGAAGGAAGGCACCAAGGAGAAATCAGGAC...AATACAATGTAAGAGAAGCAAATGCAGGGTGTCATGGGACTCAGGGGAAGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp TCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGAGATCCAGAGGCAGAGAGGTaGGTCCTGATTTCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: SFAGHQKNIYMERVWGGDPEAER*VLISPW
Trigger: CCAAGGAGAAATCAGGACCCACCTCTCTGCCTCTGG...ATCTCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CCA 90 bp ACGCCCGGCCACCACTGCCATTTTCATCACTTAACCCGAACACATTCCTCTATTTGTTGGTTCAGGCTCTaGCGGTGTGATAGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: TPGHHCHFHHLTRTHSSICWFRL*RCDSLF
Trigger: GAAAAGACTATCACACCGCCAGAGCCTGAACCAACA...AATAGAGGAATGTGTTCGGGTTAAGTGATGAAAATGGCAGTGGTGGCCGGGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp AAATTGGCAACCACCCAACACAGCCCGGGTTCTCCCTCCTTGAGATGTGAATTTTTCTCAGGTCTCTTTTaGAGCTTGTCCCCATTCTGC +
Preference number: 4 (lower is better)
Translates to: KLATTQHSPGSPSLRCEFFSGLF*SLSPFC
Trigger: GCAGAATGGGGACAAGCTCCAAAAGAGACCTGAGAA...AAATTCACATCTCAAGGAGGGAGAACCCGGGCTGTGTTGGGTGGTTGCCAATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp TGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGATCCAACATCCGCTTTaGTCCCAGGCCTTTAAAGAA +
Preference number: 4 (lower is better)
Translates to: CLGRRWSKENTSWWQENLIQHPL*SQAFKE
Trigger: TTCTTTAAAGGCCTGGGACCAAAGCGGATGTTGGAT...CAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CCA 90 bp GTGCCTTCCCCTGAGTCCCATGACACCCTGCATTTGCTTCTCTTACATTGTATTCTTGGATTTGCCAACTaGTCCGATGGATACTGGGTC +
Preference number: 4 (lower is better)
Translates to: VPSPESHDTLHLLLLHCILGFAN*SDGYWV
Trigger: GACCCAGTATCCATCGGACCAGTTGGCAAATCCAAG...AATACAATGTAAGAGAAGCAAATGCAGGGTGTCATGGGACTCAGGGGAAGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp ATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGAGCAACCTCCACCTCCTaGGTACAAGCGGTTCTCGTG +
Preference number: 4 (lower is better)
Translates to: ISFAGHQKNIYMERVWGGATSTS*VQAVLV
Trigger: CACGAGAACCGCTTGTACCCAGGAGGTGGAGGTTGC...TCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp GAATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGCAACCTCCACCTCCTaGGTACAAGCGGTTCTCGTG +
Preference number: 4 (lower is better)
Translates to: EFHLLAIRRIYTWSVFGEATSTS*VQAVLV
Trigger: CACGAGAACCGCTTGTACCCAGGAGGTGGAGGTTGC...CTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp GTGCCTTCCCCTGAGTCCCATGACACCCTGCATTTGCTTCTCTTACATTGTATTTGTGTGTACGCGCAGTaGCAGCCATTTCAGCTCAAT +
Preference number: 4 (lower is better)
Translates to: VPSPESHDTLHLLLLHCICVYAQ*QPFQLN
Trigger: ATTGAGCTGAAATGGCTGCCACTGCGCGTACACACA...AATACAATGTAAGAGAAGCAAATGCAGGGTGTCATGGGACTCAGGGGAAGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp GAATTCTTTTATGGTTACCAGTCAAAAAGTCACCGTCAGCTGGAACTGGAAGGGCAGCACCTACTGCCATaGCGACTTGGCCACCGTTAT +
Preference number: 4 (lower is better)
Translates to: EFFYGYQSKSHRQLELEGQHLLP*RLGHRY
Trigger: ATAACGGTGGCCAAGTCGCCATGGCAGTAGGTGCTG...CCCTTCCAGTTCCAGCTGACGGTGACTTTTTGACTGGTAACCATAAAAGAATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp GTGCCTTCCCCTGAGTCCCATGACACCCTGCATTTGCTTCTCTTACATTGTATTAAGAACGAGGAGTTTTaGGGTGGGAAGCTGTCAGTG +
Preference number: 4 (lower is better)
Translates to: VPSPESHDTLHLLLLHCIKNEEF*GGKLSV
Trigger: CACTGACAGCTTCCCACCCCAAAACTCCTCGTTCTT...AATACAATGTAAGAGAAGCAAATGCAGGGTGTCATGGGACTCAGGGGAAGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR CAA 72 bp AAGTGCTTACAATGTGCCAGCCACTGCACTAAATGTTaGGTATGCACCATCTCACTGCATGCTGGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: KCLQCASHCTKC*VCTISLHAGSN
Trigger: GTTGCTGCCAGCATGCAGTGAGATGGTGCATACCAAACATTTAGTGCAGTGGCTGGCACATTGTAAGCACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR TCA 90 bp TCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGAGATACTTCCTCTAAGTGCTaGACTGTGTGGGTCGACACC +
Preference number: 4 (lower is better)
Translates to: SFAGHQKNIYMERVWGGDTSSKC*TVWVDT
Trigger: GGTGTCGACCCACACAGTTCAGCACTTAGAGGAAGT...ATCTCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR TCA 90 bp ACGCCCGGCCACCACTGCCATTTTCATCACTTAACCCGAACACATTCCTCTATTCCACATTATCCGTCTTaGCACTTATTCCCAAGTCGA +
Preference number: 4 (lower is better)
Translates to: TPGHHCHFHHLTRTHSSIPHYPS*HLFPSR
Trigger: TCGACTTGGGAATAAGTGTCAAGACGGATAATGTGG...AATAGAGGAATGTGTTCGGGTTAAGTGATGAAAATGGCAGTGGTGGCCGGGCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR TCA 90 bp GAATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGCAGAGAGGTGGGTCCTaGTTTCTCCTTGGTGCCTTC +
Preference number: 4 (lower is better)
Translates to: EFHLLAIRRIYTWSVFGEQRGGS*FLLGAF
Trigger: GAAGGCACCAAGGAGAAATCAGGACCCACCTCTCTG...CTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR TCA 90 bp TGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGTATAATCTCTACTGGTaGCTCACACACCACATTCTC +
Preference number: 4 (lower is better)
Translates to: CLGRRWSKENTSWWQENLYNLYW*LTHHIL
Trigger: GAGAATGTGGTGTGTGAGTCACCAGTAGAGATTATA...CAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395961.7
CDS-3UTR TCA 90 bp GTGCCTTCCCCTGAGTCCCATGACACCCTGCATTTGCTTCTCTTACATTGTATTCTGATGTCATTTGTCTaGGAAACGCCATCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: VPSPESHDTLHLLLLHCILMSFV*ETPSER
Trigger: CCTCTCTGATGGCGTTTCTCAGACAAATGACATCAG...AATACAATGTAAGAGAAGCAAATGCAGGGTGTCATGGGACTCAGGGGAAGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR TCA 90 bp TGGCACTGCTTTGGAAGGTGGGGGCCGTCATTACACAAATCCCATGGGTGTGAACTTATTCATTCTGTGTaGGTTAACTCAACTGTCACC +
Preference number: 4 (lower is better)
Translates to: WHCFGRWGPSLHKSHGCELIHSV*VNSTVT
Trigger: GGTGACAGTTGAGTTAACTCACACAGAATGAATAAG...TTCACACCCATGGGATTTGTGTAATGACGGCCCCCACCTTCCAAAGCAGTGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR GCA 90 bp ACGCCCGGCCACCACTGCCATTTTCATCACTTAACCCGAACACATTCCTCTATTGTCCTTCTTTTTCCTTaGCGTCAACTATGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: TPGHHCHFHHLTRTHSSIVLLFP*RQLCPS
Trigger: GGAAGGACATAGTTGACGGCAAGGAAAAAGAAGGAC...AATAGAGGAATGTGTTCGGGTTAAGTGATGAAAATGGCAGTGGTGGCCGGGCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR GCA 90 bp TCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGAGATCTGGGAATCGTCCTTTaGAGTCTCCAGTCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: SFAGHQKNIYMERVWGGDLGIVL*SLQSFW
Trigger: CCAGAAGGACTGGAGACTGCAAAGGACGATTCCCAG...ATCTCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR GCA 90 bp GTGCCTTCCCCTGAGTCCCATGACACCCTGCATTTGCTTCTCTTACATTGTATTTTTTCCAAAACAGTTTaGCCAGAGGCAGAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: VPSPESHDTLHLLLLHCIFSKTV*PEAERW
Trigger: CCACCTCTCTGCCTCTGGGCAAACTGTTTTGGAAAA...AATACAATGTAAGAGAAGCAAATGCAGGGTGTCATGGGACTCAGGGGAAGGCAC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR GCA 90 bp GAATTCTTTTATGGTTACCAGTCAAAAAGTCACCGTCAGCTGGAACTGGAAGGGAGCTTGTCCCCATTCTaGAGTGAGTTCGTGTCCACC +
Preference number: 4 (lower is better)
Translates to: EFFYGYQSKSHRQLELEGSLSPF*SEFVST
Trigger: GGTGGACACGAACTCACTGCAGAATGGGGACAAGCT...CCCTTCCAGTTCCAGCTGACGGTGACTTTTTGACTGGTAACCATAAAAGAATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR GCA 90 bp GTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGTTGTTTACTTGGATTTaGCAACTGGTCCGATGGATA +
Preference number: 4 (lower is better)
Translates to: VWGGDGVRRTHLGGRRTWLFTWI*QLVRWI
Trigger: TATCCATCGGACCAGTTGGCAAATCCAAGTAAACAA...CCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR GCA 90 bp TGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGTGGAGGCAGAATTTCATTTaGTGGCCATCAGAAGAATAT +
Preference number: 4 (lower is better)
Translates to: WGGDGVRRTHLGGRRTWWRQNFI*WPSEEY
Trigger: ATATTCTTCTGATGGCCAGCAAATGAAATTCTGCCT...CCACCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR GCA 90 bp TGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGTGGATCTTTACTGTTATTTaGCAGAAAAGACTGGACCAG +
Preference number: 4 (lower is better)
Translates to: WGGDGVRRTHLGGRRTWWIFTVI*QKRLDQ
Trigger: CTGGTCCAGTCTTTTCTGGCAAATAACAGTAAAGAT...CCACCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR GCA 90 bp TGGCACTGCTTTGGAAGGTGGGGGCCGTCATTACACAAATCCCATGGGTGTGAACGGTGCCACTTAATTTaGACTGATAGAGTGAACAAA +
Preference number: 4 (lower is better)
Translates to: WHCFGRWGPSLHKSHGCERCHLI*TDRVNK
Trigger: TTTGTTCACTCTATCAGTGCAAATTAAGTGGCACCG...TTCACACCCATGGGATTTGTGTAATGACGGCCCCCACCTTCCAAAGCAGTGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp CCATTTTCATCACTTAACCCGAACACATTCCTCTATTCCCTCCCTTTCCTGCTTCTGGTGCCTCGGGTTTaGCCTCTTTCCCAAGATTCT +
Preference number: 4 (lower is better)
Translates to: PFSSLNPNTFLYSLPFLLLVPRV*PLSQDS
Trigger: AGAATCTTGGGAAAGAGGCCAAACCCGAGGCACCAG...AAGCAGGAAAGGGAGGGAATAGAGGAATGTGTTCGGGTTAAGTGATGAAAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp ATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGAGATGAATCTGCGGCTTaGTCTCCGGTACGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: ISFAGHQKNIYMERVWGGDESAA*SPVRPG
Trigger: ACCAGGACGTACCGGAGACCAAGCCGCAGATTCATC...TCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp TTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGAGTGTCCAGCTCTCACTTaGGTCTTTGTTCGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: FHLLAIRRIYTWSVFGEECPALT*VFVRWS
Trigger: GCTCCAGCGAACAAAGACCCAAGTGAGAGCTGGACA...CTCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp CCATTTTCATCACTTAACCCGAACACATTCCTCTATTCCCTCCCTTTCCTGCTTTGTCCAGCTCTCACTTaGGTCTTTGTTCGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: PFSSLNPNTFLYSLPFLLCPALT*VFVRWS
Trigger: GCTCCAGCGAACAAAGACCCAAGTGAGAGCTGGACA...AAGCAGGAAAGGGAGGGAATAGAGGAATGTGTTCGGGTTAAGTGATGAAAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp GAATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGATGCTCTGCCCTCTTaGCTTCCTGTTGGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: EFHLLAIRRIYTWSVFGEDALPS*LPVGCH
Trigger: GTGACAGCCAACAGGAAGCCAAGAGGGCAGAGCATC...CTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp GAATTCTTTTATGGTTACCAGTCAAAAAGTCACCGTCAGCTGGAACTGGAAGGGGCCCCTTGGGTCTCCTaGGATGTAAAGTTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: EFFYGYQSKSHRQLELEGAPWVS*DVKLAL
Trigger: CAAAGCCAACTTTACATCCCAGGAGACCCAAGGGGC...CCCTTCCAGTTCCAGCTGACGGTGACTTTTTGACTGGTAACCATAAAAGAATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp ATTTCCTCATTATCGTTGTTAGCTGGAAGAGAGTCTCAGAGAATCAAAGCCAAAAGTTCGTGTCCACCGTaGCCTGCTCTGTGCACTGGG +
Preference number: 4 (lower is better)
Translates to: ISSLSLLAGRESQRIKAKSSCPP*PALCTG
Trigger: CCCAGTGCACAGAGCAGGCCACGGTGGACACGAACT...TTTGGCTTTGATTCTCTGAGACTCTCTTCCAGCTAACAACGATAATGAGGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp TGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGCTGATTTGTTTACTTaGATTTGCCAACTGGTCCGA +
Preference number: 4 (lower is better)
Translates to: CLGRRWSKENTSWWQENLADLFT*ICQLVR
Trigger: TCGGACCAGTTGGCAAATCCAAGTAAACAAATCAGC...CAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CCA 90 bp CGTGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCCTGATGTTTGGCAGCTaGAGTCTTTCCCATTTATTT +
Preference number: 4 (lower is better)
Translates to: RVWGGDGVRRTHLGGRRTLMFGS*SLSHLF
Trigger: AAATAAATGGGAAAGACTCCAGCTGCCAAACATCAG...GGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CCA 90 bp GTGCCTTCCCCTGAGTCCCATGACACCCTGCATTTGCTTCTCTTACATTGTATTATTTATGCAAAGGGCTaGATCCTGACCGGCATTCTG +
Preference number: 4 (lower is better)
Translates to: VPSPESHDTLHLLLLHCIIYAKG*ILTGIL
Trigger: CAGAATGCCGGTCAGGATCCAGCCCTTTGCATAAAT...AATACAATGTAAGAGAAGCAAATGCAGGGTGTCATGGGACTCAGGGGAAGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp GTGCCTTCCCCTGAGTCCCATGACACCCTGCATTTGCTTCTCTTACATTGTATTACTTCTGTGAAATTGTaGACTGCAACTTCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: VPSPESHDTLHLLLLHCITSVKL*TATSAG
Trigger: CCCGGCAGAAGTTGCAGTCCACAATTTCACAGAAGT...AATACAATGTAAGAGAAGCAAATGCAGGGTGTCATGGGACTCAGGGGAAGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp GTGCCTTCCCCTGAGTCCCATGACACCCTGCATTTGCTTCTCTTACATTGTATTCAAGACCTCACAGCCTaGGATCATGGGTATGAATCA +
Preference number: 4 (lower is better)
Translates to: VPSPESHDTLHLLLLHCIQDLTA*DHGYES
Trigger: TGATTCATACCCATGATCCCAGGCTGTGAGGTCTTG...AATACAATGTAAGAGAAGCAAATGCAGGGTGTCATGGGACTCAGGGGAAGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR TCA 90 bp ATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGAACTTCCTCTAAGTGCTaGACTGTGTGGGTCGACACC +
Preference number: 4 (lower is better)
Translates to: ISFAGHQKNIYMERVWGGTSSKC*TVWVDT
Trigger: GGTGTCGACCCACACAGTTCAGCACTTAGAGGAAGT...TCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR TCA 90 bp ATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGAGTTCATCTCGGCTGCTaGCTTCTTGTCCTTCGAGGA +
Preference number: 4 (lower is better)
Translates to: ISFAGHQKNIYMERVWGGVHLGC*LLVLRG
Trigger: TCCTCGAAGGACAAGAAGTCAGCAGCCGAGATGAAC...TCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR TCA 90 bp AATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGGTTCATCTCGGCTGCTaGCTTCTTGTCCTTCGAGGA +
Preference number: 4 (lower is better)
Translates to: NFICWPSEEYIHGACLGRVHLGC*LLVLRG
Trigger: TCCTCGAAGGACAAGAAGTCAGCAGCCGAGATGAAC...CCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR TCA 90 bp TCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGAGATCAGCATCTCCTTCGTTaGGGTCCACTGTTTGTAAGG +
Preference number: 4 (lower is better)
Translates to: SFAGHQKNIYMERVWGGDQHLLR*GPLFVR
Trigger: CCTTACAAACAGTGGACCTCAACGAAGGAGATGCTG...ATCTCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395961.7
CDS-3UTR TCA 90 bp ATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGATCCATCCCCTTTCACTaGATTCTCCTCCGCACCTGT +
Preference number: 4 (lower is better)
Translates to: ISFAGHQKNIYMERVWGGSIPFH*ILLRTC
Trigger: ACAGGTGCGGAGGAGAATTCAGTGAAAGGGGATGGA...TCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422805.1
CDS-3UTR TCA 90 bp TGGCACTGCTTTGGAAGGTGGGGGCCGTCATTACACAAATCCCATGGGTGTGAATTATCCTTACTTCTGTaGAATTGTGGACTGCAACTT +
Preference number: 4 (lower is better)
Translates to: WHCFGRWGPSLHKSHGCELSLLL*NCGLQL
Trigger: AAGTTGCAGTCCACAATTTCACAGAAGTAAGGATAA...TTCACACCCATGGGATTTGTGTAATGACGGCCCCCACCTTCCAAAGCAGTGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR TCA 90 bp TCTCCCACAGACATGAAAGCAAGCTTTTATGTACTTAGGTTGGATTTCAACCTTAGCCAAGGGTGGACCTaGGCCCCCTCTCCAGAAATT +
Preference number: 4 (lower is better)
Translates to: SPTDMKASFYVLRLDFNLSQGWT*APSPEI
Trigger: AATTTCTGGAGAGGGGGCTCAGGTCCACCCTTGGCT...AAGGTTGAAATCCAACCTAAGTACATAAAAGCTTGCTTTCATGTCTGTGGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR GCA 90 bp TCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGAGATAGATTTAGCAGCTGGTaGCTCGGGTTTGGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: SFAGHQKNIYMERVWGGDRFSSW*LGFGLF
Trigger: AAAGAGGCCAAACCCGAGGCACCAGCTGCTAAATCT...ATCTCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR GCA 90 bp CCATTTTCATCACTTAACCCGAACACATTCCTCTATTCCCTCCCTTTCCTGCTTAACTATGTCCTTCCCTaGAGGGACATCATCGGACTG +
Preference number: 4 (lower is better)
Translates to: PFSSLNPNTFLYSLPFLLNYVLP*RDIIGL
Trigger: CAGTCCGATGATGTCCCTGCAGGGAAGGACATAGTT...AAGCAGGAAAGGGAGGGAATAGAGGAATGTGTTCGGGTTAAGTGATGAAAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR GCA 90 bp GAATTCTTTTATGGTTACCAGTCAAAAAGTCACCGTCAGCTGGAACTGGAAGGGAACTATGTCCTTCCCTaGAGGGACATCATCGGACTG +
Preference number: 4 (lower is better)
Translates to: EFFYGYQSKSHRQLELEGNYVLP*RDIIGL
Trigger: CAGTCCGATGATGTCCCTGCAGGGAAGGACATAGTT...CCCTTCCAGTTCCAGCTGACGGTGACTTTTTGACTGGTAACCATAAAAGAATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR GCA 90 bp CTCCCTTCTTCAAGCTTAGAGGATAAGCACGCATTTACTACAACGCTTAATTCCCTCTGCTATAGCTGCTaGCTGGGAATCGTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: LPSSSLEDKHAFTTTLNSLCYSC*LGIVLC
Trigger: GCAAAGGACGATTCCCAGGCAGCAGCTATAGCAGAG...GGAATTAAGCGTTGTAGTAAATGCGTGCTTATCCTCTAAGCTTGAAGAAGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR GCA 90 bp GAATTCTTTTATGGTTACCAGTCAAAAAGTCACCGTCAGCTGGAACTGGAAGGGATCCTTTGGAATTCTTaGCAGCCCCTTGGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: EFFYGYQSKSHRQLELEGILWNS*QPLGSP
Trigger: AGGAGACCCAAGGGGCTGGCAAGAATTCCAAAGGAT...CCCTTCCAGTTCCAGCTGACGGTGACTTTTTGACTGGTAACCATAAAAGAATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR GCA 90 bp TCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGAGATTGTGCCCCGATGGGTTaGATCCTTTGGAATTCTTGC +
Preference number: 4 (lower is better)
Translates to: SFAGHQKNIYMERVWGGDCAPMG*ILWNSC
Trigger: GCAAGAATTCCAAAGGATGCAACCCATCGGGGCACA...ATCTCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR GCA 90 bp GTTTTATCAGAGCACATCCTGAGAACATTAGGAATGACAGACACACTTGAGATAGTCACGGACTGTGTGTaGCCCGATGGGTTGCATCCT +
Preference number: 4 (lower is better)
Translates to: VLSEHILRTLGMTDTLEIVTDCV*PDGLHP
Trigger: AGGATGCAACCCATCGGGGCACACACAGTCCGTGAC...TATCTCAAGTGTGTCTGTCATTCCTAATGTTCTCAGGATGTGCTCTGATAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR GCA 90 bp ATTTCCTCATTATCGTTGTTAGCTGGAAGAGAGTCTCAGAGAATCAAAGCCAAAGTCACGGACTGTGTGTaGCCCGATGGGTTGCATCCT +
Preference number: 4 (lower is better)
Translates to: ISSLSLLAGRESQRIKAKVTDCV*PDGLHP
Trigger: AGGATGCAACCCATCGGGGCACACACAGTCCGTGAC...TTTGGCTTTGATTCTCTGAGACTCTCTTCCAGCTAACAACGATAATGAGGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR GCA 90 bp TCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGAGATTTTACCCTTCTGTGGTaGTCCTGTTGGTTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: SFAGHQKNIYMERVWGGDFTLLW*SCWFRL
Trigger: GAGCCTGAACCAACAGGAGCACCACAGAAGGGTAAA...ATCTCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR GCA 90 bp ATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGAAGCTTGTCCCCATTCTaGAGTGAGTTCGTGTCCACC +
Preference number: 4 (lower is better)
Translates to: ISFAGHQKNIYMERVWGGSLSPF*SEFVST
Trigger: GGTGGACACGAACTCACTGCAGAATGGGGACAAGCT...TCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR GCA 90 bp CTCCCTTCTTCAAGCTTAGAGGATAAGCACGCATTTACTACAACGCTTAATTCCAGCTTGTCCCCATTCTaGAGTGAGTTCGTGTCCACC +
Preference number: 4 (lower is better)
Translates to: LPSSSLEDKHAFTTTLNSSLSPF*SEFVST
Trigger: GGTGGACACGAACTCACTGCAGAATGGGGACAAGCT...GGAATTAAGCGTTGTAGTAAATGCGTGCTTATCCTCTAAGCTTGAAGAAGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR GCA 90 bp GTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGAGGCAGAATTTCATTTaGTGGCCATCAGAAGAATAT +
Preference number: 4 (lower is better)
Translates to: VWGGDGVRRTHLGGRRTWRQNFI*WPSEEY
Trigger: ATATTCTTCTGATGGCCAGCAAATGAAATTCTGCCT...CCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CCA 90 bp ATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGACTGGTGCCTCGGGTTTaGCCTCTTTCCCAAGATTCT +
Preference number: 4 (lower is better)
Translates to: ISFAGHQKNIYMERVWGGLVPRV*PLSQDS
Trigger: AGAATCTTGGGAAAGAGGCCAAACCCGAGGCACCAG...TCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp TTATTAACTGAGGTTATGGGGAGGGTTTTATCAGAGCACATCCTGAGAACATTAGTCTCCGGTACGTCCTaGTACAGGCCGAGAGAGCAT +
Preference number: 4 (lower is better)
Translates to: LLTEVMGRVLSEHILRTLVSGTS*YRPREH
Trigger: ATGCTCTCTCGGCCTGTACCAGGACGTACCGGAGAC...TAATGTTCTCAGGATGTGCTCTGATAAAACCCTCCCCATAACCTCAGTTAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp GTTTTATCAGAGCACATCCTGAGAACATTAGGAATGACAGACACACTTGAGATATGGAGTCCTTGGGCTTaGAGGGAGCTTCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: VLSEHILRTLGMTDTLEIWSPWA*RELLLL
Trigger: CAGGAGGAGAAGCTCCCTCCAAGCCCAAGGACTCCA...TATCTCAAGTGTGTCTGTCATTCCTAATGTTCTCAGGATGTGCTCTGATAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp AATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGCTGTTGGCTGTCACCTaGCACCTTTTCCTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: NFICWPSEEYIHGACLGRLLAVT*HLFLSL
Trigger: AAGGGACAGGAAAAGGTGCCAGGTGACAGCCAACAG...CCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp CTCCCTTCTTCAAGCTTAGAGGATAAGCACGCATTTACTACAACGCTTAATTCCCTGTTGGCTGTCACCTaGCACCTTTTCCTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: LPSSSLEDKHAFTTTLNSLLAVT*HLFLSL
Trigger: AAGGGACAGGAAAAGGTGCCAGGTGACAGCCAACAG...GGAATTAAGCGTTGTAGTAAATGCGTGCTTATCCTCTAAGCTTGAAGAAGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp ATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGACTCTTGGCTTCCTGTTaGCTGTCACCTGGCACCTTT +
Preference number: 4 (lower is better)
Translates to: ISFAGHQKNIYMERVWGGLLASC*LSPGTF
Trigger: AAAGGTGCCAGGTGACAGCCAACAGGAAGCCAAGAG...TCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp GAATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGCTATAGCTGCTGCCTaGGAATCGTCCTTTGCAGTC +
Preference number: 4 (lower is better)
Translates to: EFHLLAIRRIYTWSVFGEAIAAA*ESSFAV
Trigger: GACTGCAAAGGACGATTCCCAGGCAGCAGCTATAGC...CTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp AATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGGCTATAGCTGCTGCCTaGGAATCGTCCTTTGCAGTC +
Preference number: 4 (lower is better)
Translates to: NFICWPSEEYIHGACLGRAIAAA*ESSFAV
Trigger: GACTGCAAAGGACGATTCCCAGGCAGCAGCTATAGC...CCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp TCCTTGAGCTTCTTCCAAGATAGAGCAGATAAGGATGGAAACACAAACCAACCAGCTATAGCTGCTGCCTaGGAATCGTCCTTTGCAGTC +
Preference number: 4 (lower is better)
Translates to: SLSFFQDRADKDGNTNQPAIAAA*ESSFAV
Trigger: GACTGCAAAGGACGATTCCCAGGCAGCAGCTATAGC...TGGTTGGTTTGTGTTTCCATCCTTATCTGCTCTATCTTGGAAGAAGCTCAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp TCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGAGATCTGTGTGTGCCCCGATaGGTTGCATCCTTTGGAATT +
Preference number: 4 (lower is better)
Translates to: SFAGHQKNIYMERVWGGDLCVPR*VASFGI
Trigger: AATTCCAAAGGATGCAACCCATCGGGGCACACACAG...ATCTCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CCA 90 bp TTATTAACTGAGGTTATGGGGAGGGTTTTATCAGAGCACATCCTGAGAACATTACTGTGGTGCTCCTGTTaGTTCAGGCTCTGGCGGTGT +
Preference number: 4 (lower is better)
Translates to: LLTEVMGRVLSEHILRTLLWCSC*FRLWRC
Trigger: ACACCGCCAGAGCCTGAACCAACAGGAGCACCACAG...TAATGTTCTCAGGATGTGCTCTGATAAAACCCTCCCCATAACCTCAGTTAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp ATTTCCTCATTATCGTTGTTAGCTGGAAGAGAGTCTCAGAGAATCAAAGCCAAACTGTGGTGCTCCTGTTaGTTCAGGCTCTGGCGGTGT +
Preference number: 4 (lower is better)
Translates to: ISSLSLLAGRESQRIKAKLWCSC*FRLWRC
Trigger: ACACCGCCAGAGCCTGAACCAACAGGAGCACCACAG...TTTGGCTTTGATTCTCTGAGACTCTCTTCCAGCTAACAACGATAATGAGGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp CCATTTTCATCACTTAACCCGAACACATTCCTCTATTCCCTCCCTTTCCTGCTTACTGGGCTGGTTCTTTaGCTTCCTGCTTGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: PFSSLNPNTFLYSLPFLLTGLVL*LPACCS
Trigger: AGAGCAACAAGCAGGAAGCCAAAGAACCAGCCCAGT...AAGCAGGAAAGGGAGGGAATAGAGGAATGTGTTCGGGTTAAGTGATGAAAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp GTTTTATCAGAGCACATCCTGAGAACATTAGGAATGACAGACACACTTGAGATAGCCTGCTCTGTGCACTaGGCTGGTTCTTTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: VLSEHILRTLGMTDTLEIACSVH*AGSLAS
Trigger: GGAAGCCAAAGAACCAGCCCAGTGCACAGAGCAGGC...TATCTCAAGTGTGTCTGTCATTCCTAATGTTCTCAGGATGTGCTCTGATAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp TCTCCCACAGACATGAAAGCAAGCTTTTATGTACTTAGGTTGGATTTCAACCTTGCCTGCTCTGTGCACTaGGCTGGTTCTTTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: SPTDMKASFYVLRLDFNLACSVH*AGSLAS
Trigger: GGAAGCCAAAGAACCAGCCCAGTGCACAGAGCAGGC...AAGGTTGAAATCCAACCTAAGTACATAAAAGCTTGCTTTCATGTCTGTGGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp CCATTTTCATCACTTAACCCGAACACATTCCTCTATTCCCTCCCTTTCCTGCTTTGGTCCGATGGATACTaGGTCTGTTTGCACTTGAGC +
Preference number: 4 (lower is better)
Translates to: PFSSLNPNTFLYSLPFLLWSDGY*VCLHLS
Trigger: GCTCAAGTGCAAACAGACCCAGTATCCATCGGACCA...AAGCAGGAAAGGGAGGGAATAGAGGAATGTGTTCGGGTTAAGTGATGAAAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp TTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGAGTGGTCCGATGGATACTaGGTCTGTTTGCACTTGAGC +
Preference number: 4 (lower is better)
Translates to: FHLLAIRRIYTWSVFGEEWSDGY*VCLHLS
Trigger: GCTCAAGTGCAAACAGACCCAGTATCCATCGGACCA...CTCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CCA 90 bp CCATTTTCATCACTTAACCCGAACACATTCCTCTATTCCCTCCCTTTCCTGCTTCTTGGATTTGCCAACTaGTCCGATGGATACTGGGTC +
Preference number: 4 (lower is better)
Translates to: PFSSLNPNTFLYSLPFLLLGFAN*SDGYWV
Trigger: GACCCAGTATCCATCGGACCAGTTGGCAAATCCAAG...AAGCAGGAAAGGGAGGGAATAGAGGAATGTGTTCGGGTTAAGTGATGAAAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp GTGCCTTCCCCTGAGTCCCATGACACCCTGCATTTGCTTCTCTTACATTGTATTCACTTCTTCTTGACATaGGAGAAGACACACTTCCCT +
Preference number: 4 (lower is better)
Translates to: VPSPESHDTLHLLLLHCIHFFLT*EKTHFP
Trigger: AGGGAAGTGTGTCTTCTCCCATGTCAAGAAGAAGTG...AATACAATGTAAGAGAAGCAAATGCAGGGTGTCATGGGACTCAGGGGAAGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp TCTCCCACAGACATGAAAGCAAGCTTTTATGTACTTAGGTTGGATTTCAACCTTCAGGAAGGACCTCACTaGCTGCTGGGAACAACTGCC +
Preference number: 4 (lower is better)
Translates to: SPTDMKASFYVLRLDFNLQEGPH*LLGTTA
Trigger: GGCAGTTGTTCCCAGCAGCCAGTGAGGTCCTTCCTG...AAGGTTGAAATCCAACCTAAGTACATAAAAGCTTGCTTTCATGTCTGTGGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp GTGCCTTCCCCTGAGTCCCATGACACCCTGCATTTGCTTCTCTTACATTGTATTGTTGGATTTCAACCTTaGCTCTGCCATGTGTGTTCT +
Preference number: 4 (lower is better)
Translates to: VPSPESHDTLHLLLLHCIVGFQP*LCHVCS
Trigger: AGAACACACATGGCAGAGCCAAGGTTGAAATCCAAC...AATACAATGTAAGAGAAGCAAATGCAGGGTGTCATGGGACTCAGGGGAAGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp TGGCACTGCTTTGGAAGGTGGGGGCCGTCATTACACAAATCCCATGGGTGTGAATTTATGTACTTAGGTTaGATTTCAACCTTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: WHCFGRWGPSLHKSHGCEFMYLG*ISTLAL
Trigger: CAGAGCCAAGGTTGAAATCCAACCTAAGTACATAAA...TTCACACCCATGGGATTTGTGTAATGACGGCCCCCACCTTCCAAAGCAGTGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp TCTCCCACAGACATGAAAGCAAGCTTTTATGTACTTAGGTTGGATTTCAACCTTGTCACCTCCCCAAAGTaGCCAACCTCCACCCACTGT +
Preference number: 4 (lower is better)
Translates to: SPTDMKASFYVLRLDFNLVTSPK*PTSTHC
Trigger: ACAGTGGGTGGAGGTTGGCCACTTTGGGGAGGTGAC...AAGGTTGAAATCCAACCTAAGTACATAAAAGCTTGCTTTCATGTCTGTGGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR CAA 72 bp CAGATCTTGATAAGTTCACATTCTAGTGGCACTGCTTaGGAAGGTGGGGGCCGTCATTACACAAATCCCATG +
Preference number: 4 (lower is better)
Translates to: QILISSHSSGTA*EGGGRHYTNPM
Trigger: CATGGGATTTGTGTAATGACGGCCCCCACCTTCCAAAGCAGTGCCACTAGAATGTGAACTTATCAAGATCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR TCA 90 bp CTCCCTTCTTCAAGCTTAGAGGATAAGCACGCATTTACTACAACGCTTAATTCCCTTTTCTGTGGAGTCTaGTGTATTCTCCTCCGCACC +
Preference number: 4 (lower is better)
Translates to: LPSSSLEDKHAFTTTLNSLFCGV*CILLRT
Trigger: GGTGCGGAGGAGAATACATCAGACTCCACAGAAAAG...GGAATTAAGCGTTGTAGTAAATGCGTGCTTATCCTCTAAGCTTGAAGAAGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371435.6
CDS-3UTR TCA 90 bp AATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGGGGTCTGTTTGCACTTaGGCATCCAACATCCGCTTT +
Preference number: 4 (lower is better)
Translates to: NFICWPSEEYIHGACLGRGSVCT*ASNIRF
Trigger: AAAGCGGATGTTGGATGCTCAAGTGCAAACAGACCC...CCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR TCA 90 bp TCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGAGATTCCATCCCCTTTCACTaGCATTTGTCTGAGAAACGC +
Preference number: 4 (lower is better)
Translates to: SFAGHQKNIYMERVWGGDSIPFH*HLSEKR
Trigger: GCGTTTCTCAGACAAATGTCAGTGAAAGGGGATGGA...ATCTCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395961.7
CDS-3UTR TCA 90 bp GTGCCTTCCCCTGAGTCCCATGACACCCTGCATTTGCTTCTCTTACATTGTATTAGCACAGTTTTAGGATaGAGTCAACCCATGGAACAT +
Preference number: 4 (lower is better)
Translates to: VPSPESHDTLHLLLLHCISTVLG*SQPMEH
Trigger: ATGTTCCATGGGTTGACTTCATCCTAAAACTGTGCT...AATACAATGTAAGAGAAGCAAATGCAGGGTGTCATGGGACTCAGGGGAAGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR GCA 90 bp ATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGACTGATTTCTCCTTGGTaGCTTCCTTCGCAGGTTCAG +
Preference number: 4 (lower is better)
Translates to: ISFAGHQKNIYMERVWGGLISPW*LPSQVQ
Trigger: CTGAACCTGCGAAGGAAGGCACCAAGGAGAAATCAG...TCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR GCA 90 bp GAATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGCTGATTTCTCCTTGGTaGCTTCCTTCGCAGGTTCAG +
Preference number: 4 (lower is better)
Translates to: EFHLLAIRRIYTWSVFGELISPW*LPSQVQ
Trigger: CTGAACCTGCGAAGGAAGGCACCAAGGAGAAATCAG...CTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR GCA 90 bp CCATTTTCATCACTTAACCCGAACACATTCCTCTATTCCCTCCCTTTCCTGCTTTTTTCCAAAACAGTTTaGCCAGAGGCAGAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: PFSSLNPNTFLYSLPFLLFSKTV*PEAERW
Trigger: CCACCTCTCTGCCTCTGGGCAAACTGTTTTGGAAAA...AAGCAGGAAAGGGAGGGAATAGAGGAATGTGTTCGGGTTAAGTGATGAAAATGG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR GCA 90 bp TCCTTGAGCTTCTTCCAAGATAGAGCAGATAAGGATGGAAACACAAACCAACCATTTACCCTTCTGTGGTaGTCCTGTTGGTTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: SLSFFQDRADKDGNTNQPFTLLW*SCWFRL
Trigger: GAGCCTGAACCAACAGGAGCACCACAGAAGGGTAAA...TGGTTGGTTTGTGTTTCCATCCTTATCTGCTCTATCTTGGAAGAAGCTCAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR GCA 90 bp CCATTTTCATCACTTAACCCGAACACATTCCTCTATTCCCTCCCTTTCCTGCTTGGTTCTTTGGCTTCCTaGTTGTTGCTCTTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: PFSSLNPNTFLYSLPFLLGSLAS*LLLFCL
Trigger: CAAGCAGAAGAGCAACAAGCAGGAAGCCAAAGAACC...AAGCAGGAAAGGGAGGGAATAGAGGAATGTGTTCGGGTTAAGTGATGAAAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR GCA 90 bp CTTACAAGGACCCTATTTGAAAAACAACGCTTATTCATTCCTTTTTCTATACCCCCGTGGCCTGCTCTGTaGACTGGGCTGGTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: LTRTLFEKQRLFIPFSIPPWPAL*TGLVLW
Trigger: CCAAAGAACCAGCCCAGTGCACAGAGCAGGCCACGG...GGGTATAGAAAAAGGAATGAATAAGCGTTGTTTTTCAAATAGGGTCCTTGTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR GCA 90 bp CTTACAAGGACCCTATTTGAAAAACAACGCTTATTCATTCCTTTTTCTATACCCAAGCCCCCAAGGGACTaGTGCCGCTTCTCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: LTRTLFEKQRLFIPFSIPKPPRD*CRFSGL
Trigger: GAGACCTGAGAAGCGGCAGCAGTCCCTTGGGGGCTT...GGGTATAGAAAAAGGAATGAATAAGCGTTGTTTTTCAAATAGGGTCCTTGTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR GCA 90 bp TGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGATCTTTACTGTTATTTaGCAGAAAAGACTGGACCAG +
Preference number: 4 (lower is better)
Translates to: CLGRRWSKENTSWWQENLIFTVI*QKRLDQ
Trigger: CTGGTCCAGTCTTTTCTGGCAAATAACAGTAAAGAT...CAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR GCA 90 bp GAATTCTTTTATGGTTACCAGTCAAAAAGTCACCGTCAGCTGGAACTGGAAGGGATCTATACAGGTGCATaGCAGTCCCCCGGTAATGAA +
Preference number: 4 (lower is better)
Translates to: EFFYGYQSKSHRQLELEGIYTGA*QSPGNE
Trigger: TTCATTACCGGGGGACTGGCATGCACCTGTATAGAT...CCCTTCCAGTTCCAGCTGACGGTGACTTTTTGACTGGTAACCATAAAAGAATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp TTATTAACTGAGGTTATGGGGAGGGTTTTATCAGAGCACATCCTGAGAACATTAGGTCAGCTGAAGTGGTaGGTGACTTTTCAGCACCCG +
Preference number: 4 (lower is better)
Translates to: LLTEVMGRVLSEHILRTLGQLKW*VTFQHP
Trigger: CGGGTGCTGAAAAGTCACCCACCACTTCAGCTGACC...TAATGTTCTCAGGATGTGCTCTGATAAAACCCTCCCCATAACCTCAGTTAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp AATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGCTGTGTGTGCCCCGATaGGTTGCATCCTTTGGAATT +
Preference number: 4 (lower is better)
Translates to: NFICWPSEEYIHGACLGRLCVPR*VASFGI
Trigger: AATTCCAAAGGATGCAACCCATCGGGGCACACACAG...CCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CCA 90 bp GAATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGTCCTGATTTCTCCTTaGTGCCTTCCTTCGCAGGTT +
Preference number: 4 (lower is better)
Translates to: EFHLLAIRRIYTWSVFGEVLISP*CLPSQV
Trigger: AACCTGCGAAGGAAGGCACCAAGGAGAAATCAGGAC...CTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CCA 90 bp TCTCCCACAGACATGAAAGCAAGCTTTTATGTACTTAGGTTGGATTTCAACCTTCCAGAGGCAGAGAGGTaGGTCCTGATTTCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: SPTDMKASFYVLRLDFNLPEAER*VLISPW
Trigger: CCAAGGAGAAATCAGGACCCACCTCTCTGCCTCTGG...AAGGTTGAAATCCAACCTAAGTACATAAAAGCTTGCTTTCATGTCTGTGGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp AATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGCTCTTTACCCTTCTGTaGTGCTCCTGTTGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: NFICWPSEEYIHGACLGRLFTLL*CSCWFR
Trigger: CCTGAACCAACAGGAGCACCACAGAAGGGTAAAGAG...CCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CCA 90 bp TCCTTGAGCTTCTTCCAAGATAGAGCAGATAAGGATGGAAACACAAACCAACCAACTGGGCTGGTTCTTTaGCTTCCTGCTTGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: SLSFFQDRADKDGNTNQPTGLVL*LPACCS
Trigger: AGAGCAACAAGCAGGAAGCCAAAGAACCAGCCCAGT...TGGTTGGTTTGTGTTTCCATCCTTATCTGCTCTATCTTGGAAGAAGCTCAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp AATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGTGCCAACTGGTCCGATaGATACTGGGTCTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: NFICWPSEEYIHGACLGRCQLVR*ILGLFA
Trigger: TGCAAACAGACCCAGTATCCATCGGACCAGTTGGCA...CCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CCA 90 bp CTCCCTTCTTCAAGCTTAGAGGATAAGCACGCATTTACTACAACGCTTAATTCCAAGGAGAACACATCTTaGTGGCAGGAGAACCTGGTG +
Preference number: 4 (lower is better)
Translates to: LPSSSLEDKHAFTTTLNSKENTS*WQENLV
Trigger: CACCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTT...GGAATTAAGCGTTGTAGTAAATGCGTGCTTATCCTCTAAGCTTGAAGAAGGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp AATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGAAGGAGAACACATCTTaGTGGCAGGAGAACCTGGTG +
Preference number: 4 (lower is better)
Translates to: NFICWPSEEYIHGACLGRKENTS*WQENLV
Trigger: CACCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTT...CCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CCA 90 bp CTCCCTTCTTCAAGCTTAGAGGATAAGCACGCATTTACTACAACGCTTAATTCCTCCGTTCTAGGAAATTaGCAACCACCCAACACAGCC +
Preference number: 4 (lower is better)
Translates to: LPSSSLEDKHAFTTTLNSSVLGN*QPPNTA
Trigger: GGCTGTGTTGGGTGGTTGCCAATTTCCTAGAACGGA...GGAATTAAGCGTTGTAGTAAATGCGTGCTTATCCTCTAAGCTTGAAGAAGGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp GAATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGTGGAGTCTGATGTTTaGCAGCTGGAGTCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: EFHLLAIRRIYTWSVFGEVESDV*QLESFP
Trigger: TGGGAAAGACTCCAGCTGCCAAACATCAGACTCCAC...CTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CCA 90 bp TCTCCCACAGACATGAAAGCAAGCTTTTATGTACTTAGGTTGGATTTCAACCTTAGGCGAGTCCTAGCCTaGGGCTATCCAGGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: SPTDMKASFYVLRLDFNLRRVLA*GYPGAF
Trigger: AAAAGCACCTGGATAGCCCCAGGCTAGGACTCGCCT...AAGGTTGAAATCCAACCTAAGTACATAAAAGCTTGCTTTCATGTCTGTGGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp TCTCCCACAGACATGAAAGCAAGCTTTTATGTACTTAGGTTGGATTTCAACCTTCTAGTGGCACTGCTTTaGAAGGTGGGGGCCGTCATT +
Preference number: 4 (lower is better)
Translates to: SPTDMKASFYVLRLDFNLLVALL*KVGAVI
Trigger: AATGACGGCCCCCACCTTCCAAAGCAGTGCCACTAG...AAGGTTGAAATCCAACCTAAGTACATAAAAGCTTGCTTTCATGTCTGTGGGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp TCCTTGAGCTTCTTCCAAGATAGAGCAGATAAGGATGGAAACACAAACCAACCATTAGAACCACTGGGCTaGTTACCTGGGAAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: SLSFFQDRADKDGNTNQPLEPLG*LPGKGR
Trigger: TCTACCCTTCCCAGGTAACCAGCCCAGTGGTTCTAA...TGGTTGGTTTGTGTTTCCATCCTTATCTGCTCTATCTTGGAAGAAGCTCAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp TCTCCCACAGACATGAAAGCAAGCTTTTATGTACTTAGGTTGGATTTCAACCTTCTGCCATTCTCTCTGTaGACCCTGGGCTCTTGCACT +
Preference number: 4 (lower is better)
Translates to: SPTDMKASFYVLRLDFNLLPFSL*TLGSCT
Trigger: AGTGCAAGAGCCCAGGGTCCACAGAGAGAATGGCAG...AAGGTTGAAATCCAACCTAAGTACATAAAAGCTTGCTTTCATGTCTGTGGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp ATTTCCTCATTATCGTTGTTAGCTGGAAGAGAGTCTCAGAGAATCAAAGCCAAACGAGGAGTTTTGGGGTaGGAAGCTGTCAGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: ISSLSLLAGRESQRIKAKRGVLG*EAVSAA
Trigger: TGCAGCACTGACAGCTTCCCACCCCAAAACTCCTCG...TTTGGCTTTGATTCTCTGAGACTCTCTTCCAGCTAACAACGATAATGAGGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR CAA 72 bp GCAACTCCACGAGTAGGCTCTATTATTAGCCCATTGTaGAGGGAGGACACTCAGAGTTTAAATCACTTGCTC +
Preference number: 4 (lower is better)
Translates to: ATPRVGSIISPL*REDTQSLNHLL
Trigger: GAGCAAGTGATTTAAACTCTGAGTGTCCTCCCTCAACAATGGGCTAATAATAGAGCCTACTCGTGGAGTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR CAA 72 bp GCAGCAACTCCACGAGTAGGCTCTATTATTAGCCCATaGTTGAGGGAGGACACTCAGAGTTTAAATCACTTG +
Preference number: 4 (lower is better)
Translates to: AATPRVGSIISP*LREDTQSLNHL
Trigger: CAAGTGATTTAAACTCTGAGTGTCCTCCCTCAACAATGGGCTAATAATAGAGCCTACTCGTGGAGTTGCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR CAA 72 bp TTAAACTCGTTACTATGGACTTTTTACTCCAAGTCCTaGAGATCCATCTGTGCCACCTCCCCAGCTTCCATC +
Preference number: 4 (lower is better)
Translates to: LNSLLWTFYSKS*RSICATSPASI
Trigger: GATGGAAGCTGGGGAGGTGGCACAGATGGATCTCAAGGACTTGGAGTAAAAAGTCCATAGTAACGAGTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR CAA 72 bp ACAGAGGAACAAACTAAGGCTCTGAGAAGAAGTAATTaGCTCAAGACCTCACAGCCTGGGATCATGGGTATG +
Preference number: 4 (lower is better)
Translates to: TEEQTKALRRSN*LKTSQPGIMGM
Trigger: CATACCCATGATCCCAGGCTGTGAGGTCTTGAGCAAATTACTTCTTCTCAGAGCCTTAGTTTGTTCCTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR TCA 90 bp TTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGAGTGGTGGGAACCGTGCTaGTTTGTTTACTTGGATTTG +
Preference number: 4 (lower is better)
Translates to: FHLLAIRRIYTWSVFGEEWWEPC*FVYLDL
Trigger: CAAATCCAAGTAAACAAATCAGCACGGTTCCCACCA...CTCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR TCA 90 bp CTCCCTTCTTCAAGCTTAGAGGATAAGCACGCATTTACTACAACGCTTAATTCCTCACTGACATTTGTCTaGGAAACGCCATCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: LPSSSLEDKHAFTTTLNSSLTFV*ETPSER
Trigger: CCTCTCTGATGGCGTTTCTCAGACAAATGTCAGTGA...GGAATTAAGCGTTGTAGTAAATGCGTGCTTATCCTCTAAGCTTGAAGAAGGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395961.7
CDS-3UTR TCA 90 bp ATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGACCCATTTATTTCTTCTaGGTGGGTGATCCCTCCATC +
Preference number: 4 (lower is better)
Translates to: ISFAGHQKNIYMERVWGGPIYFF*VGDPSI
Trigger: GATGGAGGGATCACCCACTCAGAAGAAATAAATGGG...TCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395961.7
ENST00000422805.1
CDS-3UTR TCA 90 bp GTGCCTTCCCCTGAGTCCCATGACACCCTGCATTTGCTTCTCTTACATTGTATTCTTTTCTGTGGAGTCTaGTGTCATTTGTCTGAGAAA +
Preference number: 4 (lower is better)
Translates to: VPSPESHDTLHLLLLHCILFCGV*CHLSEK
Trigger: TTTCTCAGACAAATGACATCAGACTCCACAGAAAAG...AATACAATGTAAGAGAAGCAAATGCAGGGTGTCATGGGACTCAGGGGAAGGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR TCA 90 bp TCCTTGAGCTTCTTCCAAGATAGAGCAGATAAGGATGGAAACACAAACCAACCACACGTGGCTGCATTTTaGCAAAAGCAAGCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: SLSFFQDRADKDGNTNQPHVAAF*QKQASE
Trigger: CTCAGAAGCTTGCTTTTGTCAAAATGCAGCCACGTG...TGGTTGGTTTGTGTTTCCATCCTTATCTGCTCTATCTTGGAAGAAGCTCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR TCA 90 bp GAATTCTTTTATGGTTACCAGTCAAAAAGTCACCGTCAGCTGGAACTGGAAGGGATCATAGAAGGCAACTaGCTTGCCCAGTTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: EFFYGYQSKSHRQLELEGIIEGN*LAQFSF
Trigger: AAAGCTGAACTGGGCAAGTCAGTTGCCTTCTATGAT...CCCTTCCAGTTCCAGCTGACGGTGACTTTTTGACTGGTAACCATAAAAGAATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR TCA 90 bp TCCTTGAGCTTCTTCCAAGATAGAGCAGATAAGGATGGAAACACAAACCAACCATGTTCTATCTCAGGCTaGGGTCATCTGCATCCTCAT +
Preference number: 4 (lower is better)
Translates to: SLSFFQDRADKDGNTNQPCSISG*GHLHPH
Trigger: ATGAGGATGCAGATGACCTCAGCCTGAGATAGAACA...TGGTTGGTTTGTGTTTCCATCCTTATCTGCTCTATCTTGGAAGAAGCTCAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR TCA 90 bp ATTTCCTCATTATCGTTGTTAGCTGGAAGAGAGTCTCAGAGAATCAAAGCCAAACTTGCTGAGGACCCTTaGGAGAACACAAAGACGACC +
Preference number: 4 (lower is better)
Translates to: ISSLSLLAGRESQRIKAKLAEDP*ENTKTT
Trigger: GGTCGTCTTTGTGTTCTCTCAAGGGTCCTCAGCAAG...TTTGGCTTTGATTCTCTGAGACTCTCTTCCAGCTAACAACGATAATGAGGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR GCA 90 bp GAATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGATTCTCTGCTATAGCTaGTGCCTGGGAATCGTCCTT +
Preference number: 4 (lower is better)
Translates to: EFHLLAIRRIYTWSVFGEILCYS*CLGIVL
Trigger: AAGGACGATTCCCAGGCAGCAGCTATAGCAGAGAAT...CTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR GCA 90 bp GAATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGTTTTCCAAAACAGTTTaGCCAGAGGCAGAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: EFHLLAIRRIYTWSVFGEFSKTV*PEAERW
Trigger: CCACCTCTCTGCCTCTGGGCAAACTGTTTTGGAAAA...CTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR GCA 90 bp ATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGATGCTTGTTGCTCTTCTaGTTGTTCATCTCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: ISFAGHQKNIYMERVWGGCLLLF*LFISAA
Trigger: AGCAGCCGAGATGAACAAGCAGAAGAGCAACAAGCA...TCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR GCA 90 bp GAATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGTGCTTGTTGCTCTTCTaGTTGTTCATCTCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: EFHLLAIRRIYTWSVFGECLLLF*LFISAA
Trigger: AGCAGCCGAGATGAACAAGCAGAAGAGCAACAAGCA...CTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR GCA 90 bp AATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGTGCTTGTTGCTCTTCTaGTTGTTCATCTCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: NFICWPSEEYIHGACLGRCLLLF*LFISAA
Trigger: AGCAGCCGAGATGAACAAGCAGAAGAGCAACAAGCA...CCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR GCA 90 bp TCCTTGAGCTTCTTCCAAGATAGAGCAGATAAGGATGGAAACACAAACCAACCATGCTTGTTGCTCTTCTaGTTGTTCATCTCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SLSFFQDRADKDGNTNQPCLLLF*LFISAA
Trigger: AGCAGCCGAGATGAACAAGCAGAAGAGCAACAAGCA...TGGTTGGTTTGTGTTTCCATCCTTATCTGCTCTATCTTGGAAGAAGCTCAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR GCA 90 bp GAATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGGTTCTTTGGCTTCCTaGTTGTTGCTCTTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: EFHLLAIRRIYTWSVFGEGSLAS*LLLFCL
Trigger: CAAGCAGAAGAGCAACAAGCAGGAAGCCAAAGAACC...CTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR GCA 90 bp CTCCCTTCTTCAAGCTTAGAGGATAAGCACGCATTTACTACAACGCTTAATTCCATTCCCTCCCTTTCCTaGTTGGTGATCATCGACTCT +
Preference number: 4 (lower is better)
Translates to: LPSSSLEDKHAFTTTLNSIPSLS*LVIIDS
Trigger: AGAGTCGATGATCACCAAGCAGGAAAGGGAGGGAAT...GGAATTAAGCGTTGTAGTAAATGCGTGCTTATCCTCTAAGCTTGAAGAAGGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR GCA 90 bp ATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGAATTCCCTCCCTTTCCTaGTTGGTGATCATCGACTCT +
Preference number: 4 (lower is better)
Translates to: ISFAGHQKNIYMERVWGGIPSLS*LVIIDS
Trigger: AGAGTCGATGATCACCAAGCAGGAAAGGGAGGGAAT...TCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR GCA 90 bp GTTTTATCAGAGCACATCCTGAGAACATTAGGAATGACAGACACACTTGAGATAACGCCCGGCCACCACTaGCATTTTCATCACTTAACC +
Preference number: 4 (lower is better)
Translates to: VLSEHILRTLGMTDTLEITPGHH*HFHHLT
Trigger: GGTTAAGTGATGAAAATGGCAGTGGTGGCCGGGCGT...TATCTCAAGTGTGTCTGTCATTCCTAATGTTCTCAGGATGTGCTCTGATAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR GCA 90 bp TCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGAGATTTTTTGATAGAATCTTaGTCTGTCGCCCAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: SFAGHQKNIYMERVWGGDFLIES*SVAQGG
Trigger: TCCACCCTGGGCGACAGAGCAAGATTCTATCAAAAA...ATCTCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR GCA 90 bp TCCTTGAGCTTCTTCCAAGATAGAGCAGATAAGGATGGAAACACAAACCAACCAAGAAGGCAACTGACTTaGCCAGTTCAGCTTTCTCGT +
Preference number: 4 (lower is better)
Translates to: SLSFFQDRADKDGNTNQPRRQLT*PVQLSR
Trigger: ACGAGAAAGCTGAACTGGGCAAGTCAGTTGCCTTCT...TGGTTGGTTTGTGTTTCCATCCTTATCTGCTCTATCTTGGAAGAAGCTCAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR GCA 90 bp TCCTTGAGCTTCTTCCAAGATAGAGCAGATAAGGATGGAAACACAAACCAACCACAGGCTGAGGTCATCTaGATCCTCATCAATAAGCTG +
Preference number: 4 (lower is better)
Translates to: SLSFFQDRADKDGNTNQPQAEVI*ILINKL
Trigger: CAGCTTATTGATGAGGATGCAGATGACCTCAGCCTG...TGGTTGGTTTGTGTTTCCATCCTTATCTGCTCTATCTTGGAAGAAGCTCAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp CCATTTTCATCACTTAACCCGAACACATTCCTCTATTCCCTCCCTTTCCTGCTTCAAGATTCTTTCCGTTaGCATCCGCAACAGCACTTA +
Preference number: 4 (lower is better)
Translates to: PFSSLNPNTFLYSLPFLLQDSFR*HPQQHL
Trigger: TAAGTGCTGTTGCGGATGCCAACGGAAAGAATCTTG...AAGCAGGAAAGGGAGGGAATAGAGGAATGTGTTCGGGTTAAGTGATGAAAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp ATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGATGGGTCTTTGTTCGCTaGAGCTTTATTGGAGCTGAC +
Preference number: 4 (lower is better)
Translates to: ISFAGHQKNIYMERVWGGWVFVR*SFIGAD
Trigger: GTCAGCTCCAATAAAGCTCCAGCGAACAAAGACCCA...TCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp TCTCCCACAGACATGAAAGCAAGCTTTTATGTACTTAGGTTGGATTTCAACCTTAAAAGCTGGAGTCCTTaGGCTTGGAGGGAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: SPTDMKASFYVLRLDFNLKSWSP*AWRELL
Trigger: GAGAAGCTCCCTCCAAGCCCAAGGACTCCAGCTTTT...AAGGTTGAAATCCAACCTAAGTACATAAAAGCTTGCTTTCATGTCTGTGGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp ATTTCCTCATTATCGTTGTTAGCTGGAAGAGAGTCTCAGAGAATCAAAGCCAAACTCTTGGCTTCCTGTTaGCTGTCACCTGGCACCTTT +
Preference number: 4 (lower is better)
Translates to: ISSLSLLAGRESQRIKAKLLASC*LSPGTF
Trigger: AAAGGTGCCAGGTGACAGCCAACAGGAAGCCAAGAG...TTTGGCTTTGATTCTCTGAGACTCTCTTCCAGCTAACAACGATAATGAGGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp TTATTAACTGAGGTTATGGGGAGGGTTTTATCAGAGCACATCCTGAGAACATTAGCCCCTTGGGTCTCCTaGGATGTAAAGTTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: LLTEVMGRVLSEHILRTLAPWVS*DVKLAL
Trigger: CAAAGCCAACTTTACATCCCAGGAGACCCAAGGGGC...TAATGTTCTCAGGATGTGCTCTGATAAAACCCTCCCCATAACCTCAGTTAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp AATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGTTCTCAGGTCTCTTTTaGAGCTTGTCCCCATTCTGC +
Preference number: 4 (lower is better)
Translates to: NFICWPSEEYIHGACLGRFSGLF*SLSPFC
Trigger: GCAGAATGGGGACAAGCTCCAAAAGAGACCTGAGAA...CCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CCA 90 bp TCCTTGAGCTTCTTCCAAGATAGAGCAGATAAGGATGGAAACACAAACCAACCATTCTCAGGTCTCTTTTaGAGCTTGTCCCCATTCTGC +
Preference number: 4 (lower is better)
Translates to: SLSFFQDRADKDGNTNQPFSGLF*SLSPFC
Trigger: GCAGAATGGGGACAAGCTCCAAAAGAGACCTGAGAA...TGGTTGGTTTGTGTTTCCATCCTTATCTGCTCTATCTTGGAAGAAGCTCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp TTATTAACTGAGGTTATGGGGAGGGTTTTATCAGAGCACATCCTGAGAACATTAGAGAACACATCTTGGTaGCAGGAGAACCTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: LLTEVMGRVLSEHILRTLENTSW*QENLVG
Trigger: TCCCACCAGGTTCTCCTGCCACCAAGATGTGTTCTC...TAATGTTCTCAGGATGTGCTCTGATAAAACCCTCCCCATAACCTCAGTTAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR TCA 90 bp ATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGAGAGCTTTATTGGAGCTaGCATCAAGCTTCACTGATC +
Preference number: 4 (lower is better)
Translates to: ISFAGHQKNIYMERVWGGELYWS*HQASLI
Trigger: GATCAGTGAAGCTTGATGTCAGCTCCAATAAAGCTC...TCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR TCA 90 bp GTTTTATCAGAGCACATCCTGAGAACATTAGGAATGACAGACACACTTGAGATAGGGTCTGTTTGCACTTaGGCATCCAACATCCGCTTT +
Preference number: 4 (lower is better)
Translates to: VLSEHILRTLGMTDTLEIGSVCT*ASNIRF
Trigger: AAAGCGGATGTTGGATGCTCAAGTGCAAACAGACCC...TATCTCAAGTGTGTCTGTCATTCCTAATGTTCTCAGGATGTGCTCTGATAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR TCA 90 bp ATTTCCTCATTATCGTTGTTAGCTGGAAGAGAGTCTCAGAGAATCAAAGCCAAAGGGTCTGTTTGCACTTaGGCATCCAACATCCGCTTT +
Preference number: 4 (lower is better)
Translates to: ISSLSLLAGRESQRIKAKGSVCT*ASNIRF
Trigger: AAAGCGGATGTTGGATGCTCAAGTGCAAACAGACCC...TTTGGCTTTGATTCTCTGAGACTCTCTTCCAGCTAACAACGATAATGAGGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR TCA 90 bp GAATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGTGGTGGGAACCGTGCTaGTTTGTTTACTTGGATTTG +
Preference number: 4 (lower is better)
Translates to: EFHLLAIRRIYTWSVFGEWWEPC*FVYLDL
Trigger: CAAATCCAAGTAAACAAATCAGCACGGTTCCCACCA...CTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR TCA 90 bp AATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGTCTGACCCAACTAGGTaGCCTGCTAAACCATCTTTA +
Preference number: 4 (lower is better)
Translates to: NFICWPSEEYIHGACLGRSDPTR*PAKPSL
Trigger: TAAAGATGGTTTAGCAGGTCACCTAGTTGGGTCAGA...CCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR TCA 90 bp TCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGAGATCGGGTTCTCCCTCCTTaGGATGTGAATTTAAACAAA +
Preference number: 4 (lower is better)
Translates to: SFAGHQKNIYMERVWGGDRVLPP*DVNLNK
Trigger: TTTGTTTAAATTCACATCTCAAGGAGGGAGAACCCG...ATCTCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR TCA 90 bp ATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGACTTTGCCGTTGTCACTaGGCCTCAAAAGCAATTGTT +
Preference number: 4 (lower is better)
Translates to: ISFAGHQKNIYMERVWGGLCRCH*ASKAIV
Trigger: AACAATTGCTTTTGAGGCTCAGTGACAACGGCAAAG...TCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR TCA 90 bp CCATTTTCATCACTTAACCCGAACACATTCCTCTATTCCCTCCCTTTCCTGCTTAATGACAGACACACTTaGGATAAGTGTCAGACGGAA +
Preference number: 4 (lower is better)
Translates to: PFSSLNPNTFLYSLPFLLNDRHT*DKCQTE
Trigger: TTCCGTCTGACACTTATCTCAAGTGTGTCTGTCATT...AAGCAGGAAAGGGAGGGAATAGAGGAATGTGTTCGGGTTAAGTGATGAAAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR TCA 90 bp ATTTCCTCATTATCGTTGTTAGCTGGAAGAGAGTCTCAGAGAATCAAAGCCAAACAGCATCTCCTTCGTTaGGGTCCACTGTTTGTAAGG +
Preference number: 4 (lower is better)
Translates to: ISSLSLLAGRESQRIKAKQHLLR*GPLFVR
Trigger: CCTTACAAACAGTGGACCTCAACGAAGGAGATGCTG...TTTGGCTTTGATTCTCTGAGACTCTCTTCCAGCTAACAACGATAATGAGGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR TCA 90 bp TCCTTGAGCTTCTTCCAAGATAGAGCAGATAAGGATGGAAACACAAACCAACCATTATTAGCCCATTGTTaGGGGAGGACACTCAGAGTT +
Preference number: 4 (lower is better)
Translates to: SLSFFQDRADKDGNTNQPLLAHC*GRTLRV
Trigger: AACTCTGAGTGTCCTCCCTCAACAATGGGCTAATAA...TGGTTGGTTTGTGTTTCCATCCTTATCTGCTCTATCTTGGAAGAAGCTCAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR TCA 90 bp GAATTCTTTTATGGTTACCAGTCAAAAAGTCACCGTCAGCTGGAACTGGAAGGGTACTTTAGAATGGGGTaGACAGCAGGGAAAATGAAC +
Preference number: 4 (lower is better)
Translates to: EFFYGYQSKSHRQLELEGYFRMG*TAGKMN
Trigger: GTTCATTTTCCCTGCTGTTCACCCCATTCTAAAGTA...CCCTTCCAGTTCCAGCTGACGGTGACTTTTTGACTGGTAACCATAAAAGAATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR GCA 90 bp GTTTTATCAGAGCACATCCTGAGAACATTAGGAATGACAGACACACTTGAGATAAACTATGTCCTTCCCTaGAGGGACATCATCGGACTG +
Preference number: 4 (lower is better)
Translates to: VLSEHILRTLGMTDTLEINYVLP*RDIIGL
Trigger: CAGTCCGATGATGTCCCTGCAGGGAAGGACATAGTT...TATCTCAAGTGTGTCTGTCATTCCTAATGTTCTCAGGATGTGCTCTGATAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR GCA 90 bp TCTCCCACAGACATGAAAGCAAGCTTTTATGTACTTAGGTTGGATTTCAACCTTTGTGCCCCGATGGGTTaGATCCTTTGGAATTCTTGC +
Preference number: 4 (lower is better)
Translates to: SPTDMKASFYVLRLDFNLCAPMG*ILWNSC
Trigger: GCAAGAATTCCAAAGGATGCAACCCATCGGGGCACA...AAGGTTGAAATCCAACCTAAGTACATAAAAGCTTGCTTTCATGTCTGTGGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR GCA 90 bp TTATTAACTGAGGTTATGGGGAGGGTTTTATCAGAGCACATCCTGAGAACATTATTTACCCTTCTGTGGTaGTCCTGTTGGTTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LLTEVMGRVLSEHILRTLFTLLW*SCWFRL
Trigger: GAGCCTGAACCAACAGGAGCACCACAGAAGGGTAAA...TAATGTTCTCAGGATGTGCTCTGATAAAACCCTCCCCATAACCTCAGTTAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR GCA 90 bp ATTTCCTCATTATCGTTGTTAGCTGGAAGAGAGTCTCAGAGAATCAAAGCCAAATTCTGTGGGTTCAGGTaGAGCATCTCCTTCGTTGAG +
Preference number: 4 (lower is better)
Translates to: ISSLSLLAGRESQRIKAKFCGFR*SISFVE
Trigger: CTCAACGAAGGAGATGCTGCACCTGAACCCACAGAA...TTTGGCTTTGATTCTCTGAGACTCTCTTCCAGCTAACAACGATAATGAGGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR GCA 90 bp TCCTTGAGCTTCTTCCAAGATAGAGCAGATAAGGATGGAAACACAAACCAACCACTGTGTACTTGGATTTaGCAACTGGTCCGATGGATA +
Preference number: 4 (lower is better)
Translates to: SLSFFQDRADKDGNTNQPLCTWI*QLVRWI
Trigger: TATCCATCGGACCAGTTGGCAAATCCAAGTACACAG...TGGTTGGTTTGTGTTTCCATCCTTATCTGCTCTATCTTGGAAGAAGCTCAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR GCA 90 bp ATTTCCTCATTATCGTTGTTAGCTGGAAGAGAGTCTCAGAGAATCAAAGCCAAACAGATTGGAGAAATCTaGACCCTTCCAGGCACTCTG +
Preference number: 4 (lower is better)
Translates to: ISSLSLLAGRESQRIKAKQIGEI*TLPGTL
Trigger: CAGAGTGCCTGGAAGGGTGCAGATTTCTCCAATCTG...TTTGGCTTTGATTCTCTGAGACTCTCTTCCAGCTAACAACGATAATGAGGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR GCA 90 bp GAATTCTTTTATGGTTACCAGTCAAAAAGTCACCGTCAGCTGGAACTGGAAGGGTATTATCTTTTTGCCTaGCTGTCTCTCCCACAGACA +
Preference number: 4 (lower is better)
Translates to: EFFYGYQSKSHRQLELEGYYLFA*LSLPQT
Trigger: TGTCTGTGGGAGAGACAGGCAGGCAAAAAGATAATA...CCCTTCCAGTTCCAGCTGACGGTGACTTTTTGACTGGTAACCATAAAAGAATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR GCA 90 bp GAATTCTTTTATGGTTACCAGTCAAAAAGTCACCGTCAGCTGGAACTGGAAGGGCAGGTATTTTCAAAATaGCATGCAGGTGGGCTAAAC +
Preference number: 4 (lower is better)
Translates to: EFFYGYQSKSHRQLELEGQVFSK*HAGGLN
Trigger: GTTTAGCCCACCTGCATGGCATTTTGAAAATACCTG...CCCTTCCAGTTCCAGCTGACGGTGACTTTTTGACTGGTAACCATAAAAGAATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp CCATTTTCATCACTTAACCCGAACACATTCCTCTATTCCCTCCCTTTCCTGCTTGTAAGTCTCTGCTTCTaGTTCATTCTCTTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: PFSSLNPNTFLYSLPFLLVSLCF*FILLVF
Trigger: GAAGACCAAGAGAATGAACCAGAAGCAGAGACTTAC...AAGCAGGAAAGGGAGGGAATAGAGGAATGTGTTCGGGTTAAGTGATGAAAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp GTTTTATCAGAGCACATCCTGAGAACATTAGGAATGACAGACACACTTGAGATACTCTTTACCCTTCTGTaGTGCTCCTGTTGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: VLSEHILRTLGMTDTLEILFTLL*CSCWFR
Trigger: CCTGAACCAACAGGAGCACCACAGAAGGGTAAAGAG...TATCTCAAGTGTGTCTGTCATTCCTAATGTTCTCAGGATGTGCTCTGATAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp ATTTCCTCATTATCGTTGTTAGCTGGAAGAGAGTCTCAGAGAATCAAAGCCAAATGGTCCGATGGATACTaGGTCTGTTTGCACTTGAGC +
Preference number: 4 (lower is better)
Translates to: ISSLSLLAGRESQRIKAKWSDGY*VCLHLS
Trigger: GCTCAAGTGCAAACAGACCCAGTATCCATCGGACCA...TTTGGCTTTGATTCTCTGAGACTCTCTTCCAGCTAACAACGATAATGAGGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp TTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGAGAGAAGAATATATACATaGAGCGTGTTTGGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: FHLLAIRRIYTWSVFGEERRIYT*SVFGEE
Trigger: CTCCTCCCCAAACACGCTCCATGTATATATTCTTCT...CTCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CCA 90 bp AATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGTTTATTTCTTCTGAGTaGGTGATCCCTCCATCCCCT +
Preference number: 4 (lower is better)
Translates to: NFICWPSEEYIHGACLGRFISSE*VIPPSP
Trigger: AGGGGATGGAGGGATCACCCACTCAGAAGAAATAAA...CCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CCA 90 bp GAATTCTTTTATGGTTACCAGTCAAAAAGTCACCGTCAGCTGGAACTGGAAGGGTTGTCAGATTCAGATTaGAGAAATCTGCACCCTTCC +
Preference number: 4 (lower is better)
Translates to: EFFYGYQSKSHRQLELEGLSDSD*RNLHPS
Trigger: GGAAGGGTGCAGATTTCTCCAATCTGAATCTGACAA...CCCTTCCAGTTCCAGCTGACGGTGACTTTTTGACTGGTAACCATAAAAGAATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp ATTTCCTCATTATCGTTGTTAGCTGGAAGAGAGTCTCAGAGAATCAAAGCCAAACACTGCTTTGGAAGGTaGGGGCCGTCATTACACAAA +
Preference number: 4 (lower is better)
Translates to: ISSLSLLAGRESQRIKAKHCFGR*GPSLHK
Trigger: TTTGTGTAATGACGGCCCCCACCTTCCAAAGCAGTG...TTTGGCTTTGATTCTCTGAGACTCTCTTCCAGCTAACAACGATAATGAGGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp TCTCCCACAGACATGAAAGCAAGCTTTTATGTACTTAGGTTGGATTTCAACCTTGTCGCAAAGTCTGGGTaGCCTTCAGTCCATGAAAGA +
Preference number: 4 (lower is better)
Translates to: SPTDMKASFYVLRLDFNLVAKSG*PSVHER
Trigger: TCTTTCATGGACTGAAGGCCACCCAGACTTTGCGAC...AAGGTTGAAATCCAACCTAAGTACATAAAAGCTTGCTTTCATGTCTGTGGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp GAATTCTTTTATGGTTACCAGTCAAAAAGTCACCGTCAGCTGGAACTGGAAGGGTGCCTTACTTTAGAATaGGGTGAACAGCAGGGAAAA +
Preference number: 4 (lower is better)
Translates to: EFFYGYQSKSHRQLELEGCLTLE*GEQQGK
Trigger: TTTTCCCTGCTGTTCACCCCATTCTAAAGTAAGGCA...CCCTTCCAGTTCCAGCTGACGGTGACTTTTTGACTGGTAACCATAAAAGAATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR CAA 72 bp TGCCACTTAATTTGCACTGATAGAGTGAACAAAATCTaGACCACGGAGAAGCCTAATTCTACTCACCGTGCA +
Preference number: 4 (lower is better)
Translates to: CHLICTDRVNKI*TTEKPNSTHRA
Trigger: TGCACGGTGAGTAGAATTAGGCTTCTCCGTGGTCAAGATTTTGTTCACTCTATCAGTGCAAATTAAGTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR CAA 72 bp CCCACAGACATGAAAGCAAGCTTTTATGTACTTAGGTaGGATTTCAACCTTGGCTCTGCCATGTGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: PTDMKASFYVLR*DFNLGSAMCVL
Trigger: AAGAACACACATGGCAGAGCCAAGGTTGAAATCCAACCTAAGTACATAAAAGCTTGCTTTCATGTCTGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR TCA 90 bp CTTACAAGGACCCTATTTGAAAAACAACGCTTATTCATTCCTTTTTCTATACCCGTTCATCTCGGCTGCTaGCTTCTTGTCCTTCGAGGA +
Preference number: 4 (lower is better)
Translates to: LTRTLFEKQRLFIPFSIPVHLGC*LLVLRG
Trigger: TCCTCGAAGGACAAGAAGTCAGCAGCCGAGATGAAC...GGGTATAGAAAAAGGAATGAATAAGCGTTGTTTTTCAAATAGGGTCCTTGTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR TCA 90 bp CTCCCTTCTTCAAGCTTAGAGGATAAGCACGCATTTACTACAACGCTTAATTCCCGGGTTCTCCCTCCTTaGGATGTGAATTTAAACAAA +
Preference number: 4 (lower is better)
Translates to: LPSSSLEDKHAFTTTLNSRVLPP*DVNLNK
Trigger: TTTGTTTAAATTCACATCTCAAGGAGGGAGAACCCG...GGAATTAAGCGTTGTAGTAAATGCGTGCTTATCCTCTAAGCTTGAAGAAGGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR TCA 90 bp GAATTCTTTTATGGTTACCAGTCAAAAAGTCACCGTCAGCTGGAACTGGAAGGGTATAATCTCTACTGGTaGCTCACACACCACCTTTTT +
Preference number: 4 (lower is better)
Translates to: EFFYGYQSKSHRQLELEGYNLYW*LTHHLF
Trigger: AAAAAGGTGGTGTGTGAGTCACCAGTAGAGATTATA...CCCTTCCAGTTCCAGCTGACGGTGACTTTTTGACTGGTAACCATAAAAGAATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR GCA 90 bp TCTCCCACAGACATGAAAGCAAGCTTTTATGTACTTAGGTTGGATTTCAACCTTGGTTCTTTGGCTTCCTaGTTGTTGCTCTTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: SPTDMKASFYVLRLDFNLGSLAS*LLLFCL
Trigger: CAAGCAGAAGAGCAACAAGCAGGAAGCCAAAGAACC...AAGGTTGAAATCCAACCTAAGTACATAAAAGCTTGCTTTCATGTCTGTGGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR GCA 90 bp TCCTTGAGCTTCTTCCAAGATAGAGCAGATAAGGATGGAAACACAAACCAACCATTAATGAGACCCCAGTaGTTCTGGACTGTTTGCAAA +
Preference number: 4 (lower is better)
Translates to: SLSFFQDRADKDGNTNQPLMRPQ*FWTVCK
Trigger: TTTGCAAACAGTCCAGAAGCACTGGGGTCTCATTAA...TGGTTGGTTTGTGTTTCCATCCTTATCTGCTCTATCTTGGAAGAAGCTCAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR GCA 90 bp TCTCCCACAGACATGAAAGCAAGCTTTTATGTACTTAGGTTGGATTTCAACCTTTTTCCAGTGGGCCGGTaGCACTTAATTTGCACTGAT +
Preference number: 4 (lower is better)
Translates to: SPTDMKASFYVLRLDFNLFPVGR*HLICTD
Trigger: ATCAGTGCAAATTAAGTGGCACCGGCCCACTGGAAA...AAGGTTGAAATCCAACCTAAGTACATAAAAGCTTGCTTTCATGTCTGTGGGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR GCA 90 bp ATTTCCTCATTATCGTTGTTAGCTGGAAGAGAGTCTCAGAGAATCAAAGCCAAACTTGCCTTTCCTAAGTaGTTACAATGTGCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: ISSLSLLAGRESQRIKAKLAFPK*LQCASH
Trigger: GTGGCTGGCACATTGTAAGCACTTAGGAAAGGCAAG...TTTGGCTTTGATTCTCTGAGACTCTCTTCCAGCTAACAACGATAATGAGGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR GCA 90 bp TCCTTGAGCTTCTTCCAAGATAGAGCAGATAAGGATGGAAACACAAACCAACCAAGTCCCATGACACCCTaGATTTGCTTCTCTTACATT +
Preference number: 4 (lower is better)
Translates to: SLSFFQDRADKDGNTNQPSPMTP*ICFSYI
Trigger: AATGTAAGAGAAGCAAATGCAGGGTGTCATGGGACT...TGGTTGGTTTGTGTTTCCATCCTTATCTGCTCTATCTTGGAAGAAGCTCAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp GAATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGTAAGTCTCTGCTTCTaGTTCATTCTCTTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: EFHLLAIRRIYTWSVFGEVSLCF*FILLVF
Trigger: GAAGACCAAGAGAATGAACCAGAAGCAGAGACTTAC...CTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp TCTCCCACAGACATGAAAGCAAGCTTTTATGTACTTAGGTTGGATTTCAACCTTTGTTGGTTCAGGCTCTaGCGGTGTGATAGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: SPTDMKASFYVLRLDFNLCWFRL*RCDSLF
Trigger: GAAAAGACTATCACACCGCCAGAGCCTGAACCAACA...AAGGTTGAAATCCAACCTAAGTACATAAAAGCTTGCTTTCATGTCTGTGGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp CTTACAAGGACCCTATTTGAAAAACAACGCTTATTCATTCCTTTTTCTATACCCGAGAACACATCTTGGTaGCAGGAGAACCTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: LTRTLFEKQRLFIPFSIPENTSW*QENLVG
Trigger: TCCCACCAGGTTCTCCTGCCACCAAGATGTGTTCTC...GGGTATAGAAAAAGGAATGAATAAGCGTTGTTTTTCAAATAGGGTCCTTGTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
3UTR CAA 72 bp CACCAACTGAAACGTTTTGCAATCACACAATCTTCCTaGAGCTTCTTCCAAGATAGAGCAGATAAGGATGGA +
Preference number: 4 (lower is better)
Translates to: HQLKRFAITQSS*SFFQDRADKDG
Trigger: TCCATCCTTATCTGCTCTATCTTGGAAGAAGCTCAAGGAAGATTGTGTGATTGCAAAACGTTTCAGTTGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR CAA 72 bp AAGCAAGCTTTTATGTACTTAGGTTGGATTTCAACCTaGGCTCTGCCATGTGTGTTCTTGGGCAAAGTTGTT +
Preference number: 4 (lower is better)
Translates to: KQAFMYLGWIST*ALPCVFLGKVV
Trigger: AACAACTTTGCCCAAGAACACACATGGCAGAGCCAAGGTTGAAATCCAACCTAAGTACATAAAAGCTTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR CAA 72 bp CCAGTGCCTTCCCCTGAGTCCCATGACACCCTGCATTaGCTTCTCTTACATTGTATTATTATTATCTTTTTG +
Preference number: 4 (lower is better)
Translates to: PVPSPESHDTLH*LLLHCIIIIFL
Trigger: CAAAAAGATAATAATAATACAATGTAAGAGAAGCAAATGCAGGGTGTCATGGGACTCAGGGGAAGGCACTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR TCA 90 bp ATTTCCTCATTATCGTTGTTAGCTGGAAGAGAGTCTCAGAGAATCAAAGCCAAACAAATCCCATGGGTGTaGATTGAAGGGACACAGTTA +
Preference number: 4 (lower is better)
Translates to: ISSLSLLAGRESQRIKAKQIPWV*IEGTQL
Trigger: TAACTGTGTCCCTTCAATTCACACCCATGGGATTTG...TTTGGCTTTGATTCTCTGAGACTCTCTTCCAGCTAACAACGATAATGAGGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR TCA 90 bp TCCTTGAGCTTCTTCCAAGATAGAGCAGATAAGGATGGAAACACAAACCAACCACTGACAATAGAACAATaGATGAGCAAGACAAGAAGG +
Preference number: 4 (lower is better)
Translates to: SLSFFQDRADKDGNTNQPLTIEQ*MSKTRR
Trigger: CCTTCTTGTCTTGCTCATTCATTGTTCTATTGTCAG...TGGTTGGTTTGTGTTTCCATCCTTATCTGCTCTATCTTGGAAGAAGCTCAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR GCA 90 bp CTTACAAGGACCCTATTTGAAAAACAACGCTTATTCATTCCTTTTTCTATACCCCTTGTCTTGATGCTCTaGCCTCTTGGCTTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: LTRTLFEKQRLFIPFSIPLVLML*PLGFLL
Trigger: CAACAGGAAGCCAAGAGGGCAGAGCATCAAGACAAG...GGGTATAGAAAAAGGAATGAATAAGCGTTGTTTTTCAAATAGGGTCCTTGTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR GCA 90 bp GTTTTATCAGAGCACATCCTGAGAACATTAGGAATGACAGACACACTTGAGATAGTCCTTCTTTTTCCTTaGCGTCAACTATGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: VLSEHILRTLGMTDTLEIVLLFP*RQLCPS
Trigger: GGAAGGACATAGTTGACGGCAAGGAAAAAGAAGGAC...TATCTCAAGTGTGTCTGTCATTCCTAATGTTCTCAGGATGTGCTCTGATAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR GCA 90 bp ATTTCCTCATTATCGTTGTTAGCTGGAAGAGAGTCTCAGAGAATCAAAGCCAAAGTCCTTCTTTTTCCTTaGCGTCAACTATGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: ISSLSLLAGRESQRIKAKVLLFP*RQLCPS
Trigger: GGAAGGACATAGTTGACGGCAAGGAAAAAGAAGGAC...TTTGGCTTTGATTCTCTGAGACTCTCTTCCAGCTAACAACGATAATGAGGAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR GCA 90 bp CTTACAAGGACCCTATTTGAAAAACAACGCTTATTCATTCCTTTTTCTATACCCGCCGCCCCCTTGTGTTaGAAAATAACCGTGCAACTT +
Preference number: 4 (lower is better)
Translates to: LTRTLFEKQRLFIPFSIPAAPLC*KITVQL
Trigger: AAGTTGCACGGTTATTTTGCAACACAAGGGGGCGGC...GGGTATAGAAAAAGGAATGAATAAGCGTTGTTTTTCAAATAGGGTCCTTGTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR GCA 90 bp TCTCCCACAGACATGAAAGCAAGCTTTTATGTACTTAGGTTGGATTTCAACCTTAGAGGGTTGCGTGAATaGCATTCAAGAAAAGGGCAA +
Preference number: 4 (lower is better)
Translates to: SPTDMKASFYVLRLDFNLRGLRE*HSRKGQ
Trigger: TTGCCCTTTTCTTGAATGGCATTCACGCAACCCTCT...AAGGTTGAAATCCAACCTAAGTACATAAAAGCTTGCTTTCATGTCTGTGGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR GCA 90 bp TCCTTGAGCTTCTTCCAAGATAGAGCAGATAAGGATGGAAACACAAACCAACCAATTTTCAAAATGCCATaGAGGTGGGCTAAACAAGCT +
Preference number: 4 (lower is better)
Translates to: SLSFFQDRADKDGNTNQPIFKMP*RWAKQA
Trigger: AGCTTGTTTAGCCCACCTGCATGGCATTTTGAAAAT...TGGTTGGTTTGTGTTTCCATCCTTATCTGCTCTATCTTGGAAGAAGCTCAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp CTTACAAGGACCCTATTTGAAAAACAACGCTTATTCATTCCTTTTTCTATACCCCTGTGTGTGCCCCGATaGGTTGCATCCTTTGGAATT +
Preference number: 4 (lower is better)
Translates to: LTRTLFEKQRLFIPFSIPLCVPR*VASFGI
Trigger: AATTCCAAAGGATGCAACCCATCGGGGCACACACAG...GGGTATAGAAAAAGGAATGAATAAGCGTTGTTTTTCAAATAGGGTCCTTGTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp ATTTCCTCATTATCGTTGTTAGCTGGAAGAGAGTCTCAGAGAATCAAAGCCAAAATCCAACATCCGCTTTaGTCCCAGGCCTTTAAAGAA +
Preference number: 4 (lower is better)
Translates to: ISSLSLLAGRESQRIKAKIQHPL*SQAFKE
Trigger: TTCTTTAAAGGCCTGGGACCAAAGCGGATGTTGGAT...TTTGGCTTTGATTCTCTGAGACTCTCTTCCAGCTAACAACGATAATGAGGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp AATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGCTGATGTTTGGCAGCTaGAGTCTTTCCCATTTATTT +
Preference number: 4 (lower is better)
Translates to: NFICWPSEEYIHGACLGRLMFGS*SLSHLF
Trigger: AAATAAATGGGAAAGACTCCAGCTGCCAAACATCAG...CCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CCA 90 bp ATTTCCTCATTATCGTTGTTAGCTGGAAGAGAGTCTCAGAGAATCAAAGCCAAACTTTGTGGAGCAGGATaGGCCAGTAAGGATTACTTA +
Preference number: 4 (lower is better)
Translates to: ISSLSLLAGRESQRIKAKLCGAG*ASKDYL
Trigger: TAAGTAATCCTTACTGGCCCATCCTGCTCCACAAAG...TTTGGCTTTGATTCTCTGAGACTCTCTTCCAGCTAACAACGATAATGAGGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp GAATTCTTTTATGGTTACCAGTCAAAAAGTCACCGTCAGCTGGAACTGGAAGGGATTATCGTTGTTAGCTaGAAGAGAGTCTCAGAGAAT +
Preference number: 4 (lower is better)
Translates to: EFFYGYQSKSHRQLELEGIIVVS*KRVSEN
Trigger: ATTCTCTGAGACTCTCTTCCAGCTAACAACGATAAT...CCCTTCCAGTTCCAGCTGACGGTGACTTTTTGACTGGTAACCATAAAAGAATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp TCCTTGAGCTTCTTCCAAGATAGAGCAGATAAGGATGGAAACACAAACCAACCAAATCCACAATGGGTGTaGCCACAGGATATTTGTTTA +
Preference number: 4 (lower is better)
Translates to: SLSFFQDRADKDGNTNQPNPQWV*PQDICL
Trigger: TAAACAAATATCCTGTGGCCACACCCATTGTGGATT...TGGTTGGTTTGTGTTTCCATCCTTATCTGCTCTATCTTGGAAGAAGCTCAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR TCA 90 bp TTATTAACTGAGGTTATGGGGAGGGTTTTATCAGAGCACATCCTGAGAACATTATGCTTTCTTCTCTTTTaGGTTTCGCTTCTGTGGGTT +
Preference number: 4 (lower is better)
Translates to: LLTEVMGRVLSEHILRTLCFLLF*VSLLWV
Trigger: AACCCACAGAAGCGAAACTCAAAAGAGAAGAAAGCA...TAATGTTCTCAGGATGTGCTCTGATAAAACCCTCCCCATAACCTCAGTTAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395961.7
CDS-3UTR TCA 90 bp ATTTCCTCATTATCGTTGTTAGCTGGAAGAGAGTCTCAGAGAATCAAAGCCAAATGCTTTCTTCTCTTTTaGGTTTCGCTTCTGTGGGTT +
Preference number: 4 (lower is better)
Translates to: ISSLSLLAGRESQRIKAKCFLLF*VSLLWV
Trigger: AACCCACAGAAGCGAAACTCAAAAGAGAAGAAAGCA...TTTGGCTTTGATTCTCTGAGACTCTCTTCCAGCTAACAACGATAATGAGGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR TCA 90 bp TCTCCCACAGACATGAAAGCAAGCTTTTATGTACTTAGGTTGGATTTCAACCTTACAAAAGCAAGCTTCTaGGAGAGTAGATCACGTAAG +
Preference number: 4 (lower is better)
Translates to: SPTDMKASFYVLRLDFNLTKASF*ESRSRK
Trigger: CTTACGTGATCTACTCTCTCAGAAGCTTGCTTTTGT...AAGGTTGAAATCCAACCTAAGTACATAAAAGCTTGCTTTCATGTCTGTGGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR GCA 90 bp AATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGAGGCAGAATTTCATTTaGTGGCCATCAGAAGAATAT +
Preference number: 4 (lower is better)
Translates to: NFICWPSEEYIHGACLGRRQNFI*WPSEEY
Trigger: ATATTCTTCTGATGGCCAGCAAATGAAATTCTGCCT...CCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR GCA 90 bp GAATTCTTTTATGGTTACCAGTCAAAAAGTCACCGTCAGCTGGAACTGGAAGGGATAATCTTACATTGCTaGAAAGCACATTCCCTAGTT +
Preference number: 4 (lower is better)
Translates to: EFFYGYQSKSHRQLELEGIILHC*KAHSLV
Trigger: AACTAGGGAATGTGCTTTGCAGCAATGTAAGATTAT...CCCTTCCAGTTCCAGCTGACGGTGACTTTTTGACTGGTAACCATAAAAGAATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR GCA 90 bp TCTCCCACAGACATGAAAGCAAGCTTTTATGTACTTAGGTTGGATTTCAACCTTTGGGGCTTGAGAGTTTaGATTCCTAACATGTTCTCA +
Preference number: 4 (lower is better)
Translates to: SPTDMKASFYVLRLDFNLWGLRV*IPNMFS
Trigger: TGAGAACATGTTAGGAATGCAAACTCTCAAGCCCCA...AAGGTTGAAATCCAACCTAAGTACATAAAAGCTTGCTTTCATGTCTGTGGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp TCTCCCACAGACATGAAAGCAAGCTTTTATGTACTTAGGTTGGATTTCAACCTTGGGACACAGTTAGTTTaGGGAATGGTTAGCCTTAAA +
Preference number: 4 (lower is better)
Translates to: SPTDMKASFYVLRLDFNLGTQLV*GMVSLK
Trigger: TTTAAGGCTAACCATTCCCCAAACTAACTGTGTCCC...AAGGTTGAAATCCAACCTAAGTACATAAAAGCTTGCTTTCATGTCTGTGGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp ATTTCCTCATTATCGTTGTTAGCTGGAAGAGAGTCTCAGAGAATCAAAGCCAAAAGTGGTAGCTCTACCTaGACCAGTGGTTTTCAAATT +
Preference number: 4 (lower is better)
Translates to: ISSLSLLAGRESQRIKAKSGSST*TSGFQI
Trigger: AATTTGAAAACCACTGGTCCAGGTAGAGCTACCACT...TTTGGCTTTGATTCTCTGAGACTCTCTTCCAGCTAACAACGATAATGAGGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR TCA 90 bp CTTACAAGGACCCTATTTGAAAAACAACGCTTATTCATTCCTTTTTCTATACCCTGGTGGGAACCGTGCTaGTTTGTTTACTTGGATTTG +
Preference number: 4 (lower is better)
Translates to: LTRTLFEKQRLFIPFSIPWWEPC*FVYLDL
Trigger: CAAATCCAAGTAAACAAATCAGCACGGTTCCCACCA...GGGTATAGAAAAAGGAATGAATAAGCGTTGTTTTTCAAATAGGGTCCTTGTAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR TCA 90 bp TCTCCCACAGACATGAAAGCAAGCTTTTATGTACTTAGGTTGGATTTCAACCTTCTGCCAAATAAGCAGTaGACAAAGTTAAGTCATGTG +
Preference number: 4 (lower is better)
Translates to: SPTDMKASFYVLRLDFNLLPNKQ*TKLSHV
Trigger: CACATGACTTAACTTTGTTCACTGCTTATTTGGCAG...AAGGTTGAAATCCAACCTAAGTACATAAAAGCTTGCTTTCATGTCTGTGGGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR GCA 90 bp GTTTTATCAGAGCACATCCTGAGAACATTAGGAATGACAGACACACTTGAGATATTGTTTACTTGGATTTaGCAACTGGTCCGATGGATA +
Preference number: 4 (lower is better)
Translates to: VLSEHILRTLGMTDTLEILFTWI*QLVRWI
Trigger: TATCCATCGGACCAGTTGGCAAATCCAAGTAAACAA...TATCTCAAGTGTGTCTGTCATTCCTAATGTTCTCAGGATGTGCTCTGATAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR GCA 90 bp CTTACAAGGACCCTATTTGAAAAACAACGCTTATTCATTCCTTTTTCTATACCCTTTTTGATAGAATCTTaGTCTGTCGCCCAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: LTRTLFEKQRLFIPFSIPFLIES*SVAQGG
Trigger: TCCACCCTGGGCGACAGAGCAAGATTCTATCAAAAA...GGGTATAGAAAAAGGAATGAATAAGCGTTGTTTTTCAAATAGGGTCCTTGTAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp CTTACAAGGACCCTATTTGAAAAACAACGCTTATTCATTCCTTTTTCTATACCCCAAGATTCTTTCCGTTaGCATCCGCAACAGCACTTA +
Preference number: 4 (lower is better)
Translates to: LTRTLFEKQRLFIPFSIPQDSFR*HPQQHL
Trigger: TAAGTGCTGTTGCGGATGCCAACGGAAAGAATCTTG...GGGTATAGAAAAAGGAATGAATAAGCGTTGTTTTTCAAATAGGGTCCTTGTAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CCA 90 bp TCCTTGAGCTTCTTCCAAGATAGAGCAGATAAGGATGGAAACACAAACCAACCAAACCTTATCTTCATTTaGAGGACTGAGAATCATAGA +
Preference number: 4 (lower is better)
Translates to: SLSFFQDRADKDGNTNQPNLIFI*RTENHR
Trigger: TCTATGATTCTCAGTCCTCCAAATGAAGATAAGGTT...TGGTTGGTTTGTGTTTCCATCCTTATCTGCTCTATCTTGGAAGAAGCTCAAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
3UTR CAA 72 bp AGAACAATGAATGAGCAAGACAAGAAGGTTCAGATCTaGATAAGTTCACATTCTAGTGGCACTGCTTTGGAA +
Preference number: 4 (lower is better)
Translates to: RTMNEQDKKVQI*ISSHSSGTALE
Trigger: TTCCAAAGCAGTGCCACTAGAATGTGAACTTATCAAGATCTGAACCTTCTTGTCTTGCTCATTCATTGTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR TCA 90 bp CTTACAAGGACCCTATTTGAAAAACAACGCTTATTCATTCCTTTTTCTATACCCAATGACAGACACACTTaGGATAAGTGTCAGACGGAA +
Preference number: 4 (lower is better)
Translates to: LTRTLFEKQRLFIPFSIPNDRHT*DKCQTE
Trigger: TTCCGTCTGACACTTATCTCAAGTGTGTCTGTCATT...GGGTATAGAAAAAGGAATGAATAAGCGTTGTTTTTCAAATAGGGTCCTTGTAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR TCA 90 bp TCTCCCACAGACATGAAAGCAAGCTTTTATGTACTTAGGTTGGATTTCAACCTTAACAAACTAAGGCTCTaGGAAGAAGTAATTTGCTCA +
Preference number: 4 (lower is better)
Translates to: SPTDMKASFYVLRLDFNLNKLRL*EEVICS
Trigger: TGAGCAAATTACTTCTTCTCAGAGCCTTAGTTTGTT...AAGGTTGAAATCCAACCTAAGTACATAAAAGCTTGCTTTCATGTCTGTGGGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR GCA 90 bp TCTCCCACAGACATGAAAGCAAGCTTTTATGTACTTAGGTTGGATTTCAACCTTTTCTATTTTGTTATGTaGCTCCTTCTCCAAGACAAC +
Preference number: 4 (lower is better)
Translates to: SPTDMKASFYVLRLDFNLFYFVM*LLLQDN
Trigger: GTTGTCTTGGAGAAGGAGGCACATAACAAAATAGAA...AAGGTTGAAATCCAACCTAAGTACATAAAAGCTTGCTTTCATGTCTGTGGGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CCA 90 bp CTTACAAGGACCCTATTTGAAAAACAACGCTTATTCATTCCTTTTTCTATACCCGCTGATTTGTTTACTTaGATTTGCCAACTGGTCCGA +
Preference number: 4 (lower is better)
Translates to: LTRTLFEKQRLFIPFSIPADLFT*ICQLVR
Trigger: TCGGACCAGTTGGCAAATCCAAGTAAACAAATCAGC...GGGTATAGAAAAAGGAATGAATAAGCGTTGTTTTTCAAATAGGGTCCTTGTAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS CCA 90 bp CTCCTCCTGCTCCCCCTGTCTCAGGTGGGAGAAGCGTGGGATCCCTaGCGGCAGAGAGGACCTTGTCTTGGGCCGGGGCGTGCCCTGGGG +
Preference number: 5 (lower is better)
Translates to: LLLLPLSQVGEAWDP*RQRGPCLGPGRALG
Trigger: CCCCAGGGCACGCCCCGGCCCAAGACAAGGTCCTCTCTGCCGCCAGGGATCCCACGCTTCTCCCACCTGAGACAGGGGGAGCAGGAGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000448484.5
CDS GCA 90 bp GTCACCCGGAGCTGCTCCTGCACAGGGTCCTGGGTCTCCAGTGCGTaGTGCCCAGTGCCTGGCTGTCGGTGGAGCCTGGCTCCCTGCACT +
Preference number: 5 (lower is better)
Translates to: VTRSCSCTGSWVSSA*CPVPGCRWSLAPCT
Trigger: AGTGCAGGGAGCCAGGCTCCACCGACAGCCAGGCACTGGGCAGCACGCACTGGAGACCCAGGACCCTGTGCAGGAGCAGCTCCGGGTGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395961.7
CDS CCA 90 bp CTTCAGTCCCCTCGTGTCACCCGGAGCTGCTCCTGCACAGGGTCCTaGGTCTCCAGTGCGTGCTGCCCAGTGCCTGGCTGTCGGTGGAGC +
Preference number: 5 (lower is better)
Translates to: LQSPRVTRSCSCTGS*VSSACCPVPGCRWS
Trigger: GCTCCACCGACAGCCAGGCACTGGGCAGCACGCACTGGAGACCCAGGACCCTGTGCAGGAGCAGCTCCGGGTGACACGAGGGGACTGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS CCA 90 bp AGGGAGCTTCTCCTCCTGCTCCCCCTGTCTCAGGTGGGAGAAGCGTaGGATCCCTGGCGGCAGAGAGGACCTTGTCTTGGGCCGGGGCGT +
Preference number: 5 (lower is better)
Translates to: RELLLLLPLSQVGEA*DPWRQRGPCLGPGR
Trigger: ACGCCCCGGCCCAAGACAAGGTCCTCTCTGCCGCCAGGGATCCCACGCTTCTCCCACCTGAGACAGGGGGAGCAGGAGGAGAAGCTCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000448484.5
CDS GCA 90 bp CTGTGGGAGTATCTTCAGTCCCCTCGTGTCACCCGGAGCTGCTCCTaGACAGGGTCCTGGGTCTCCAGTGCGTGCTGCCCAGTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: LWEYLQSPRVTRSCS*TGSWVSSACCPVPG
Trigger: GCCAGGCACTGGGCAGCACGCACTGGAGACCCAGGACCCTGTGCAGGAGCAGCTCCGGGTGACACGAGGGGACTGAAGATACTCCCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS GCA 90 bp GAGCCCCTGTGGGAGTATCTTCAGTCCCCTCGTGTCACCCGGAGCTaGTCCTGCACAGGGTCCTGGGTCTCCAGTGCGTGCTGCCCAGTG +
Preference number: 5 (lower is better)
Translates to: EPLWEYLQSPRVTRS*SCTGSWVSSACCPV
Trigger: CACTGGGCAGCACGCACTGGAGACCCAGGACCCTGTGCAGGAGCAGCTCCGGGTGACACGAGGGGACTGAAGATACTCCCACAGGGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS GCA 90 bp GCTGCTCCTGCACAGGGTCCTGGGTCTCCAGTGCGTGCTGCCCAGTaGCTGGCTGTCGGTGGAGCCTGGCTCCCTGCACTTTGCTTCCTT +
Preference number: 5 (lower is better)
Translates to: AAPAQGPGSPVRAAQ*LAVGGAWLPALCFL
Trigger: AAGGAAGCAAAGTGCAGGGAGCCAGGCTCCACCGACAGCCAGGCACTGGGCAGCACGCACTGGAGACCCAGGACCCTGTGCAGGAGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395961.7
CDS CCA 90 bp CTCCTGCACAGGGTCCTGGGTCTCCAGTGCGTGCTGCCCAGTGCCTaGCTGTCGGTGGAGCCTGGCTCCCTGCACTTTGCTTCCTTGTGC +
Preference number: 5 (lower is better)
Translates to: LLHRVLGLQCVLPSA*LSVEPGSLHFASLC
Trigger: GCACAAGGAAGCAAAGTGCAGGGAGCCAGGCTCCACCGACAGCCAGGCACTGGGCAGCACGCACTGGAGACCCAGGACCCTGTGCAGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395961.7
CDS CCA 90 bp GGGTCTCCAGTGCGTGCTGCCCAGTGCCTGGCTGTCGGTGGAGCCTaGCTCCCTGCACTTTGCTTCCTTGTGCAGAGCCTGCTGGCTGAA +
Preference number: 5 (lower is better)
Translates to: GSPVRAAQCLAVGGA*LPALCFLVQSLLAE
Trigger: TTCAGCCAGCAGGCTCTGCACAAGGAAGCAAAGTGCAGGGAGCCAGGCTCCACCGACAGCCAGGCACTGGGCAGCACGCACTGGAGACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395961.7
CDS-3UTR CAA 90 bp GTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGAGAGAGGACCTTGTCTaGGGCCGGGGCGTGCCCTGG +
Preference number: 5 (lower is better)
Translates to: VWGGDGVRRTHLGGRRTWREDLV*GRGVPW
Trigger: CCAGGGCACGCCCCGGCCCAAGACAAGGTCCTCTCT...CCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS GCA 90 bp GACTGCTGCCGCTTCTCAGGTCTCTTTTGGAGCTTGTCCCCATTCTaGAGTGAGTTCGTGTCCACCGTGGCCTGCTCTGTGCACTGGGCT +
Preference number: 5 (lower is better)
Translates to: DCCRFSGLFWSLSPF*SEFVSTVACSVHWA
Trigger: AGCCCAGTGCACAGAGCAGGCCACGGTGGACACGAACTCACTGCAGAATGGGGACAAGCTCCAAAAGAGACCTGAGAAGCGGCAGCAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
ENST00000448484.5
CDS-3UTR CAA 90 bp TTACTGCTGTGGGTGACGGGTGGCTCGGTCTTGCTGAGGACCCTTGAGAGAACAACGGGTGGCTCGGTCTaGCTGAGGACCCTTGAGAGA +
Preference number: 5 (lower is better)
Translates to: LLLWVTGGSVLLRTLERTTGGSV*LRTLER
Trigger: TCTCTCAAGGGTCCTCAGCAAGACCGAGCCACCCGT...TGTTCTCTCAAGGGTCCTCAGCAAGACCGAGCCACCCGTCACCCACAGCAGTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS GCA 90 bp TTGGTGCCTTCCTTCGCAGGTTCAGGGGTTGTCACGGACTGTGTGTaGCCCGATGGGTTGCATCCTTTGGAATTCTTGCCAGCCCCTTGG +
Preference number: 5 (lower is better)
Translates to: LVPSFAGSGVVTDCV*PDGLHPLEFLPAPW
Trigger: CCAAGGGGCTGGCAAGAATTCCAAAGGATGCAACCCATCGGGGCACACACAGTCCGTGACAACCCCTGAACCTGCGAAGGAAGGCACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
ENST00000448484.5
CDS GCA 90 bp ACAGTTTGCCCAGAGGCAGAGAGGTGGGTCCTGATTTCTCCTTGGTaGCTTCCTTCGCAGGTTCAGGGGTTGTCACGGACTGTGTGTGCC +
Preference number: 5 (lower is better)
Translates to: TVCPEAERWVLISPW*LPSQVQGLSRTVCA
Trigger: GGCACACACAGTCCGTGACAACCCCTGAACCTGCGAAGGAAGGCACCAAGGAGAAATCAGGACCCACCTCTCTGCCTCTGGGCAAACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
ENST00000448484.5
CDS GCA 90 bp TGGAGCTTGTCCCCATTCTGCAGTGAGTTCGTGTCCACCGTGGCCTaGTCTGTGCACTGGGCTGGTTCTTTGGCTTCCTGCTTGTTGCTC +
Preference number: 5 (lower is better)
Translates to: WSLSPFCSEFVSTVA*SVHWAGSLASCLLL
Trigger: GAGCAACAAGCAGGAAGCCAAAGAACCAGCCCAGTGCACAGAGCAGGCCACGGTGGACACGAACTCACTGCAGAATGGGGACAAGCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
ENST00000448484.5
CDS-3UTR CAA 90 bp GGAGCGTGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGCTGGAGTCCTTGGGCTaGGAGGGAGCTTCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: GACLGRRWSKENTSWWQELESLG*EGASPP
Trigger: AGGAGGAGAAGCTCCCTCCAAGCCCAAGGACTCCAG...CTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACACGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp TGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGTGGTCTGTGGTGCTCCTGTaGGTTCAGGCTCTGGCGGTG +
Preference number: 5 (lower is better)
Translates to: WGGDGVRRTHLGGRRTWWSVVLL*VQALAV
Trigger: CACCGCCAGAGCCTGAACCAACAGGAGCACCACAGA...CCACCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS CCA 90 bp GTCCTGCCCCGGTCCAGCTGCCACCGGAAGTGTCCAGCTCTCACTTaGGTCTTTGTTCGCTGGAGCTTTATTGGAGCTGACATCAAGCTT +
Preference number: 5 (lower is better)
Translates to: VLPRSSCHRKCPALT*VFVRWSFIGADIKL
Trigger: AAGCTTGATGTCAGCTCCAATAAAGCTCCAGCGAACAAAGACCCAAGTGAGAGCTGGACACTTCCGGTGGCAGCTGGACCGGGGCAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp TGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGTGGGCTGGTGCCTCGGGTTaGGCCTCTTTCCCAAGATTC +
Preference number: 5 (lower is better)
Translates to: WGGDGVRRTHLGGRRTWWAGASG*ASFPRF
Trigger: GAATCTTGGGAAAGAGGCCAAACCCGAGGCACCAGC...CCACCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp TTACTGCTGTGGGTGACGGGTGGCTCGGTCTTGCTGAGGACCCTTGAGAGAACACTCATCCACCTTGTCTaGATGCTCTGCCCTCTTGGC +
Preference number: 5 (lower is better)
Translates to: LLLWVTGGSVLLRTLERTLIHLV*MLCPLG
Trigger: GCCAAGAGGGCAGAGCATCAAGACAAGGTGGATGAG...TGTTCTCTCAAGGGTCCTCAGCAAGACCGAGCCACCCGTCACCCACAGCAGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CAA 90 bp TTACTGCTGTGGGTGACGGGTGGCTCGGTCTTGCTGAGGACCCTTGAGAGAACACATCCTTTGGAATTCTaGCCAGCCCCTTGGGTCTCC +
Preference number: 5 (lower is better)
Translates to: LLLWVTGGSVLLRTLERTHPLEF*PAPWVS
Trigger: GGAGACCCAAGGGGCTGGCAAGAATTCCAAAGGATG...TGTTCTCTCAAGGGTCCTCAGCAAGACCGAGCCACCCGTCACCCACAGCAGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CAA 90 bp CGTGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTCGCAGGTTCAGGGGTaGTCACGGACTGTGTGTGCC +
Preference number: 5 (lower is better)
Translates to: RVWGGDGVRRTHLGGRRTSQVQG*SRTVCA
Trigger: GGCACACACAGTCCGTGACAACCCCTGAACCTGCGA...GGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CAA 90 bp GTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGTCGCAGGTTCAGGGGTaGTCACGGACTGTGTGTGCC +
Preference number: 5 (lower is better)
Translates to: VWGGDGVRRTHLGGRRTWSQVQG*SRTVCA
Trigger: GGCACACACAGTCCGTGACAACCCCTGAACCTGCGA...CCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CAA 90 bp TGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGTGGCTGCACTTTGCTTCCTaGTGCAGAGCCTGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: WGGDGVRRTHLGGRRTWWLHFAS*CRACWL
Trigger: CAGCCAGCAGGCTCTGCACAAGGAAGCAAAGTGCAG...CCACCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395961.7
CDS CCA 90 bp CAGCTGGTGCCTCGGGTTTGGCCTCTTTCCCAAGATTCTTTCCGTTaGCATCCGCAACAGCACTTATCTCCGTTGTCTCGGGGGAAGAAG +
Preference number: 5 (lower is better)
Translates to: QLVPRVWPLSQDSFR*HPQQHLSPLSRGKK
Trigger: CTTCTTCCCCCGAGACAACGGAGATAAGTGCTGTTGCGGATGCCAACGGAAAGAATCTTGGGAAAGAGGCCAAACCCGAGGCACCAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS CCA 90 bp TCTTTTGGAGCTTGTCCCCATTCTGCAGTGAGTTCGTGTCCACCGTaGCCTGCTCTGTGCACTGGGCTGGTTCTTTGGCTTCCTGCTTGT +
Preference number: 5 (lower is better)
Translates to: SFGACPHSAVSSCPP*PALCTGLVLWLPAC
Trigger: ACAAGCAGGAAGCCAAAGAACCAGCCCAGTGCACAGAGCAGGCCACGGTGGACACGAACTCACTGCAGAATGGGGACAAGCTCCAAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
ENST00000448484.5
CDS-3UTR CAA 90 bp TGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGTGGGTGTCCAGCTCTCACTaGGGTCTTTGTTCGCTGGAG +
Preference number: 5 (lower is better)
Translates to: WGGDGVRRTHLGGRRTWWVSSSH*GLCSLE
Trigger: CTCCAGCGAACAAAGACCCAAGTGAGAGCTGGACAC...CCACCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp GGAGCGTGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGCCTGGGAATCGTCCTTaGCAGTCTCCAGTCCTTCTG +
Preference number: 5 (lower is better)
Translates to: GACLGRRWSKENTSWWQEPGNRP*QSPVLL
Trigger: CAGAAGGACTGGAGACTGCAAAGGACGATTCCCAGG...CTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACACGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp GTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGTCGGCTGCTGACTTCTaGTCCTTCGAGGAGCCCTCT +
Preference number: 5 (lower is better)
Translates to: VWGGDGVRRTHLGGRRTWSAADF*SFEEPS
Trigger: AGAGGGCTCCTCGAAGGACAAGAAGTCAGCAGCCGA...CCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CAA 90 bp CGTGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTCGGCTGCTGACTTCTaGTCCTTCGAGGAGCCCTCT +
Preference number: 5 (lower is better)
Translates to: RVWGGDGVRRTHLGGRRTSAADF*SFEEPS
Trigger: AGAGGGCTCCTCGAAGGACAAGAAGTCAGCAGCCGA...GGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CAA 90 bp TGGCACTGCTTTGGAAGGTGGGGGCCGTCATTACACAAATCCCATGGGTGTGAATCTAGTGGCACTGCTTaGGAAGGTGGGGGCCGTCAT +
Preference number: 5 (lower is better)
Translates to: WHCFGRWGPSLHKSHGCESSGTA*EGGGRH
Trigger: ATGACGGCCCCCACCTTCCAAAGCAGTGCCACTAGA...TTCACACCCATGGGATTTGTGTAATGACGGCCCCCACCTTCCAAAGCAGTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS CCA 90 bp CACACACCACCTTTTTCCAAAACAGTTTGCCCAGAGGCAGAGAGGTaGGTCCTGATTTCTCCTTGGTGCCTTCCTTCGCAGGTTCAGGGG +
Preference number: 5 (lower is better)
Translates to: HTPPFSKTVCPEAER*VLISPWCLPSQVQG
Trigger: CCCCTGAACCTGCGAAGGAAGGCACCAAGGAGAAATCAGGACCCACCTCTCTGCCTCTGGGCAAACTGTTTTGGAAAAAGGTGGTGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CAA 90 bp TGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGCTGGTGCCTCGGGTTaGGCCTCTTTCCCAAGATTC +
Preference number: 5 (lower is better)
Translates to: CLGRRWSKENTSWWQENLAGASG*ASFPRF
Trigger: GAATCTTGGGAAAGAGGCCAAACCCGAGGCACCAGC...CAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp GAATTCTTTTATGGTTACCAGTCAAAAAGTCACCGTCAGCTGGAACTGGAAGGGAGAGAGGACCTTGTCTaGGGCCGGGGCGTGCCCTGG +
Preference number: 5 (lower is better)
Translates to: EFFYGYQSKSHRQLELEGREDLV*GRGVPW
Trigger: CCAGGGCACGCCCCGGCCCAAGACAAGGTCCTCTCT...CCCTTCCAGTTCCAGCTGACGGTGACTTTTTGACTGGTAACCATAAAAGAATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CAA 90 bp TGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGTGGATTCTTGCCAGCCCCTaGGGTCTCCTGGGATGTAAA +
Preference number: 5 (lower is better)
Translates to: WGGDGVRRTHLGGRRTWWILASP*GLLGCK
Trigger: TTTACATCCCAGGAGACCCAAGGGGCTGGCAAGAAT...CCACCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CAA 90 bp GTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGCATCCTTTGGAATTCTaGCCAGCCCCTTGGGTCTCC +
Preference number: 5 (lower is better)
Translates to: VWGGDGVRRTHLGGRRTWHPLEF*PAPWVS
Trigger: GGAGACCCAAGGGGCTGGCAAGAATTCCAAAGGATG...CCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CAA 90 bp CGTGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCCATCCTTTGGAATTCTaGCCAGCCCCTTGGGTCTCC +
Preference number: 5 (lower is better)
Translates to: RVWGGDGVRRTHLGGRRTHPLEF*PAPWVS
Trigger: GGAGACCCAAGGGGCTGGCAAGAATTCCAAAGGATG...GGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CAA 90 bp TGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGTGGGTGTGCCCCGATGGGTaGCATCCTTTGGAATTCTTG +
Preference number: 5 (lower is better)
Translates to: WGGDGVRRTHLGGRRTWWVCPDG*HPLEFL
Trigger: CAAGAATTCCAAAGGATGCAACCCATCGGGGCACAC...CCACCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CAA 90 bp CGTGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCCACTGGGCTGGTTCTTaGGCTTCCTGCTTGTTGCTC +
Preference number: 5 (lower is better)
Translates to: RVWGGDGVRRTHLGGRRTHWAGS*ASCLLL
Trigger: GAGCAACAAGCAGGAAGCCAAAGAACCAGCCCAGTG...GGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CAA 90 bp GGAGCGTGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGGGTCTCTTTTGGAGCTaGTCCCCATTCTGCAGTGAG +
Preference number: 5 (lower is better)
Translates to: GACLGRRWSKENTSWWQEGLFWS*SPFCSE
Trigger: CTCACTGCAGAATGGGGACAAGCTCCAAAAGAGACC...CTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACACGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CAA 90 bp TTACTGCTGTGGGTGACGGGTGGCTCGGTCTTGCTGAGGACCCTTGAGAGAACAATTCCCATAATCCCCTaGCCTGGAACTGCATCCATC +
Preference number: 5 (lower is better)
Translates to: LLLWVTGGSVLLRTLERTIPIIP*PGTASI
Trigger: GATGGATGCAGTTCCAGGCAAGGGGATTATGGGAAT...TGTTCTCTCAAGGGTCCTCAGCAAGACCGAGCCACCCGTCACCCACAGCAGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS CCA 90 bp GAGCTGACATCAAGCTTCACTGATCCAAGGGATGAATCTGCGGCTTaGTCTCCGGTACGTCCTGGTACAGGCCGAGAGAGCATCAAGAAA +
Preference number: 5 (lower is better)
Translates to: ELTSSFTDPRDESAA*SPVRPGTGRESIKK
Trigger: TTTCTTGATGCTCTCTCGGCCTGTACCAGGACGTACCGGAGACCAAGCCGCAGATTCATCCCTTGGATCAGTGAAGCTTGATGTCAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp CGTGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTCATTTGGTTACCCATaGCTCCTGCTGAGCCCCTGT +
Preference number: 5 (lower is better)
Translates to: RVWGGDGVRRTHLGGRRTSFGYP*LLLSPC
Trigger: ACAGGGGCTCAGCAGGAGCAATGGGTAACCAAATGA...GGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp AATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGAGAGAGGACCTTGTCTaGGGCCGGGGCGTGCCCTGG +
Preference number: 5 (lower is better)
Translates to: NFICWPSEEYIHGACLGRREDLV*GRGVPW
Trigger: CCAGGGCACGCCCCGGCCCAAGACAAGGTCCTCTCT...CCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp ACGCCCGGCCACCACTGCCATTTTCATCACTTAACCCGAACACATTCCTCTATTCCTCTTGGCTTCCTGTaGGCTGTCACCTGGCACCTT +
Preference number: 5 (lower is better)
Translates to: TPGHHCHFHHLTRTHSSIPLGFL*AVTWHL
Trigger: AAGGTGCCAGGTGACAGCCAACAGGAAGCCAAGAGG...AATAGAGGAATGTGTTCGGGTTAAGTGATGAAAATGGCAGTGGTGGCCGGGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp GTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGGATGGGTTGCATCCTTaGGAATTCTTGCCAGCCCCT +
Preference number: 5 (lower is better)
Translates to: VWGGDGVRRTHLGGRRTWDGLHP*EFLPAP
Trigger: AGGGGCTGGCAAGAATTCCAAAGGATGCAACCCATC...CCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CAA 90 bp TTACTGCTGTGGGTGACGGGTGGCTCGGTCTTGCTGAGGACCCTTGAGAGAACATTTTTCCAAAACAGTTaGCCCAGAGGCAGAGAGGTG +
Preference number: 5 (lower is better)
Translates to: LLLWVTGGSVLLRTLERTFFQNS*PRGREV
Trigger: CACCTCTCTGCCTCTGGGCAAACTGTTTTGGAAAAA...TGTTCTCTCAAGGGTCCTCAGCAAGACCGAGCCACCCGTCACCCACAGCAGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CAA 90 bp GTGCCTTCCCCTGAGTCCCATGACACCCTGCATTTGCTTCTCTTACATTGTATTTCTGTGGTGCTCCTGTaGGTTCAGGCTCTGGCGGTG +
Preference number: 5 (lower is better)
Translates to: VPSPESHDTLHLLLLHCISVVLL*VQALAV
Trigger: CACCGCCAGAGCCTGAACCAACAGGAGCACCACAGA...AATACAATGTAAGAGAAGCAAATGCAGGGTGTCATGGGACTCAGGGGAAGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CAA 90 bp TGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGCACTGGGCTGGTTCTTaGGCTTCCTGCTTGTTGCTC +
Preference number: 5 (lower is better)
Translates to: CLGRRWSKENTSWWQENLHWAGS*ASCLLL
Trigger: GAGCAACAAGCAGGAAGCCAAAGAACCAGCCCAGTG...CAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS TCA 90 bp TTTGGCTTCCTGCTTGTTGCTCTTCTGCTTGTTCATCTCGGCTGCTaGCTTCTTGTCCTTCGAGGAGCCCTCTTTACCCTTCTGTGGTGC +
Preference number: 5 (lower is better)
Translates to: FGFLLVALLLVHLGC*LLVLRGALFTLLWC
Trigger: GCACCACAGAAGGGTAAAGAGGGCTCCTCGAAGGACAAGAAGTCAGCAGCCGAGATGAACAAGCAGAAGAGCAACAAGCAGGAAGCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
ENST00000448484.5
CDS CCA 90 bp GTGTGCCCCGATGGGTTGCATCCTTTGGAATTCTTGCCAGCCCCTTaGGTCTCCTGGGATGTAAAGTTGGCTTTGTCTGACTTAAGGTCA +
Preference number: 5 (lower is better)
Translates to: VCPDGLHPLEFLPAP*VSWDVKLALSDLRS
Trigger: TGACCTTAAGTCAGACAAAGCCAACTTTACATCCCAGGAGACCCAAGGGGCTGGCAAGAATTCCAAAGGATGCAACCCATCGGGGCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
ENST00000448484.5
CDS-3UTR CAA 90 bp GGAGCGTGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGGCCACATTATCCGTCTaGACACTTATTCCCAAGTCG +
Preference number: 5 (lower is better)
Translates to: GACLGRRWSKENTSWWQEATLSV*TLIPKS
Trigger: CGACTTGGGAATAAGTGTCAAGACGGATAATGTGGC...CTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACACGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp TGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGATTCTTGCCAGCCCCTaGGGTCTCCTGGGATGTAAA +
Preference number: 5 (lower is better)
Translates to: CLGRRWSKENTSWWQENLILASP*GLLGCK
Trigger: TTTACATCCCAGGAGACCCAAGGGGCTGGCAAGAAT...CAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CAA 90 bp ACGCCCGGCCACCACTGCCATTTTCATCACTTAACCCGAACACATTCCTCTATTCATCCTTTGGAATTCTaGCCAGCCCCTTGGGTCTCC +
Preference number: 5 (lower is better)
Translates to: TPGHHCHFHHLTRTHSSIHPLEF*PAPWVS
Trigger: GGAGACCCAAGGGGCTGGCAAGAATTCCAAAGGATG...AATAGAGGAATGTGTTCGGGTTAAGTGATGAAAATGGCAGTGGTGGCCGGGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp TGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGTGTGCCCCGATGGGTaGCATCCTTTGGAATTCTTG +
Preference number: 5 (lower is better)
Translates to: CLGRRWSKENTSWWQENLVCPDG*HPLEFL
Trigger: CAAGAATTCCAAAGGATGCAACCCATCGGGGCACAC...CAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CAA 90 bp GGAGCGTGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGGGATACTGGGTCTGTTaGCACTTGAGCATCCAACAT +
Preference number: 5 (lower is better)
Translates to: GACLGRRWSKENTSWWQEGYWVC*HLSIQH
Trigger: ATGTTGGATGCTCAAGTGCAAACAGACCCAGTATCC...CTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACACGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CAA 90 bp TGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGTGCCGCCCCCTTGTGTaGCAAAATAACCGTGCAACT +
Preference number: 5 (lower is better)
Translates to: CLGRRWSKENTSWWQENLCRPLV*QNNRAT
Trigger: AGTTGCACGGTTATTTTGCAACACAAGGGGGCGGCA...CAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp GTGCCTTCCCCTGAGTCCCATGACACCCTGCATTTGCTTCTCTTACATTGTATTAGAGGTAAGGCTGCTTaGTGGAGCAGGATGGGCCAG +
Preference number: 5 (lower is better)
Translates to: VPSPESHDTLHLLLLHCIRGKAA*WSRMGQ
Trigger: CTGGCCCATCCTGCTCCACAAAGCAGCCTTACCTCT...AATACAATGTAAGAGAAGCAAATGCAGGGTGTCATGGGACTCAGGGGAAGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CAA 90 bp TTACTGCTGTGGGTGACGGGTGGCTCGGTCTTGCTGAGGACCCTTGAGAGAACAGTGCAAGTAGTTTATTaGGGAAGTGATCCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: LLLWVTGGSVLLRTLERTVQVVY*GSDPRK
Trigger: CTTCCTGGGATCACTTCCCAAATAAACTACTTGCAC...TGTTCTCTCAAGGGTCCTCAGCAAGACCGAGCCACCCGTCACCCACAGCAGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS TCA 90 bp TTGGATTTGCCAACTGGTCCGATGGATACTGGGTCTGTTTGCACTTaGGCATCCAACATCCGCTTTGGTCCCAGGCCTTTAAAGAAGCCC +
Preference number: 5 (lower is better)
Translates to: LDLPTGPMDTGSVCT*ASNIRFGPRPLKKP
Trigger: GGGCTTCTTTAAAGGCCTGGGACCAAAGCGGATGTTGGATGCTCAAGTGCAAACAGACCCAGTATCCATCGGACCAGTTGGCAAATCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
ENST00000448484.5
CDS TCA 90 bp AGGAGAACACATCTTGGTGGCAGGAGAACCTGGTGGGAACCGTGCTaGTTTGTTTACTTGGATTTGCCAACTGGTCCGATGGATACTGGG +
Preference number: 5 (lower is better)
Translates to: RRTHLGGRRTWWEPC*FVYLDLPTGPMDTG
Trigger: CCCAGTATCCATCGGACCAGTTGGCAAATCCAAGTAAACAAATCAGCACGGTTCCCACCAGGTTCTCCTGCCACCAAGATGTGTTCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS TCA 90 bp AGGTGCTTTTTCTTGGTGCCTCTAGCCTGGATCTCGGATGTCTTCTaGCCAGCTTGTCCATCACAGACACTTTCTGCTTTCGATGCCGTG +
Preference number: 5 (lower is better)
Translates to: RCFFLVPLAWISDVF*PACPSQTLSAFDAV
Trigger: CACGGCATCGAAAGCAGAAAGTGTCTGTGATGGACAAGCTGGTCAGAAGACATCCGAGATCCAGGCTAGAGGCACCAAGAAAAAGCACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS CCA 90 bp ACACTTCCCTGTGTACTTGGATTTGCCAACTGGTCCGATGGATACTaGGTCTGTTTGCACTTGAGCATCCAACATCCGCTTTGGTCCCAG +
Preference number: 5 (lower is better)
Translates to: TLPCVLGFANWSDGY*VCLHLSIQHPLWSQ
Trigger: CTGGGACCAAAGCGGATGTTGGATGCTCAAGTGCAAACAGACCCAGTATCCATCGGACCAGTTGGCAAATCCAAGTACACAGGGAAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CAA 90 bp TGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGTGGTCCTGGGATGTAAAGTaGGCTTTGTCTGACTTAAGG +
Preference number: 5 (lower is better)
Translates to: WGGDGVRRTHLGGRRTWWSWDVK*ALSDLR
Trigger: CCTTAAGTCAGACAAAGCCAACTTTACATCCCAGGA...CCACCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CAA 90 bp GAATTCTTTTATGGTTACCAGTCAAAAAGTCACCGTCAGCTGGAACTGGAAGGGTCGCAGGTTCAGGGGTaGTCACGGACTGTGTGTGCC +
Preference number: 5 (lower is better)
Translates to: EFFYGYQSKSHRQLELEGSQVQG*SRTVCA
Trigger: GGCACACACAGTCCGTGACAACCCCTGAACCTGCGA...CCCTTCCAGTTCCAGCTGACGGTGACTTTTTGACTGGTAACCATAAAAGAATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CAA 90 bp CGTGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTTTTTCCAAAACAGTTaGCCCAGAGGCAGAGAGGTG +
Preference number: 5 (lower is better)
Translates to: RVWGGDGVRRTHLGGRRTFFQNS*PRGREV
Trigger: CACCTCTCTGCCTCTGGGCAAACTGTTTTGGAAAAA...GGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CAA 90 bp TGGCACTGCTTTGGAAGGTGGGGGCCGTCATTACACAAATCCCATGGGTGTGAATCTTTGGCTTCCTGCTaGTTGCTCTTCTGCTTGTTC +
Preference number: 5 (lower is better)
Translates to: WHCFGRWGPSLHKSHGCESLASC*LLFCLF
Trigger: GAACAAGCAGAAGAGCAACAAGCAGGAAGCCAAAGA...TTCACACCCATGGGATTTGTGTAATGACGGCCCCCACCTTCCAAAGCAGTGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CAA 90 bp TGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGATACATGGAGCGTGTTaGGGGAGGAGATGGAGTAAG +
Preference number: 5 (lower is better)
Translates to: CLGRRWSKENTSWWQENLIHGAC*GRRWSK
Trigger: CTTACTCCATCTCCTCCCCAAACACGCTCCATGTAT...CAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CAA 90 bp ACGCCCGGCCACCACTGCCATTTTCATCACTTAACCCGAACACATTCCTCTATTCCCTCCCTTTCCTGCTaGGTGATCATCGACTCTTCT +
Preference number: 5 (lower is better)
Translates to: TPGHHCHFHHLTRTHSSIPSLSC*VIIDSS
Trigger: AGAAGAGTCGATGATCACCAAGCAGGAAAGGGAGGG...AATAGAGGAATGTGTTCGGGTTAAGTGATGAAAATGGCAGTGGTGGCCGGGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp ACGCCCGGCCACCACTGCCATTTTCATCACTTAACCCGAACACATTCCTCTATTCGGGGTTTCATGATGTaGGCCAGGCTAGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: TPGHHCHFHHLTRTHSSIRGFMM*ARLVLN
Trigger: GTTCAAGACTAGCCTGGCCAACATCATGAAACCCCG...AATAGAGGAATGTGTTCGGGTTAAGTGATGAAAATGGCAGTGGTGGCCGGGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp GAATTCTTTTATGGTTACCAGTCAAAAAGTCACCGTCAGCTGGAACTGGAAGGGCCTGGGCTCTTGCACTaGCTGTTCTTCTGGGAGCCC +
Preference number: 5 (lower is better)
Translates to: EFFYGYQSKSHRQLELEGPGLLH*LFFWEP
Trigger: GGGCTCCCAGAAGAACAGCAAGTGCAAGAGCCCAGG...CCCTTCCAGTTCCAGCTGACGGTGACTTTTTGACTGGTAACCATAAAAGAATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS TCA 90 bp TCCAGCTCTCACTTGGGTCTTTGTTCGCTGGAGCTTTATTGGAGCTaGCATCAAGCTTCACTGATCCAAGGGATGAATCTGCGGCTTGGT +
Preference number: 5 (lower is better)
Translates to: SSSHLGLCSLELYWS*HQASLIQGMNLRLG
Trigger: ACCAAGCCGCAGATTCATCCCTTGGATCAGTGAAGCTTGATGTCAGCTCCAATAAAGCTCCAGCGAACAAAGACCCAAGTGAGAGCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS GCA 90 bp GCAGGAGAACCTGGTGGGAACCGTGCTGATTTGTTTACTTGGATTTaGCAACTGGTCCGATGGATACTGGGTCTGTTTGCACTTGAGCAT +
Preference number: 5 (lower is better)
Translates to: AGEPGGNRADLFTWI*QLVRWILGLFALEH
Trigger: ATGCTCAAGTGCAAACAGACCCAGTATCCATCGGACCAGTTGGCAAATCCAAGTAAACAAATCAGCACGGTTCCCACCAGGTTCTCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS CCA 90 bp GATGGGTTGCATCCTTTGGAATTCTTGCCAGCCCCTTGGGTCTCCTaGGATGTAAAGTTGGCTTTGTCTGACTTAAGGTCAGCTGAAGTG +
Preference number: 5 (lower is better)
Translates to: DGLHPLEFLPAPWVS*DVKLALSDLRSAEV
Trigger: CACTTCAGCTGACCTTAAGTCAGACAAAGCCAACTTTACATCCCAGGAGACCCAAGGGGCTGGCAAGAATTCCAAAGGATGCAACCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
ENST00000448484.5
CDS-3UTR CAA 90 bp CGTGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTTCTGGTTCATTCTCTaGGTCTTCAACTCTTTGGGG +
Preference number: 5 (lower is better)
Translates to: RVWGGDGVRRTHLGGRRTFWFIL*VFNSLG
Trigger: CCCCAAAGAGTTGAAGACCAAGAGAATGAACCAGAA...GGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp TGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGCTCTCACTTGGGTCTTaGTTCGCTGGAGCTTTATTG +
Preference number: 5 (lower is better)
Translates to: CLGRRWSKENTSWWQENLLSLGS*FAGALL
Trigger: CAATAAAGCTCCAGCGAACAAAGACCCAAGTGAGAG...CAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp TCCTTGAGCTTCTTCCAAGATAGAGCAGATAAGGATGGAAACACAAACCAACCACTGGAGTCCTTGGGCTaGGAGGGAGCTTCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: SLSFFQDRADKDGNTNQPLESLG*EGASPP
Trigger: AGGAGGAGAAGCTCCCTCCAAGCCCAAGGACTCCAG...TGGTTGGTTTGTGTTTCCATCCTTATCTGCTCTATCTTGGAAGAAGCTCAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CAA 90 bp TGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGGTGGGATGTAAAGTTGGCTTaGTCTGACTTAAGGTCAGCT +
Preference number: 5 (lower is better)
Translates to: WGGDGVRRTHLGGRRTWWDVKLA*SDLRSA
Trigger: AGCTGACCTTAAGTCAGACAAAGCCAACTTTACATC...CCACCAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CAA 90 bp GTGCCTTCCCCTGAGTCCCATGACACCCTGCATTTGCTTCTCTTACATTGTATTGTGTGCCCCGATGGGTaGCATCCTTTGGAATTCTTG +
Preference number: 5 (lower is better)
Translates to: VPSPESHDTLHLLLLHCIVCPDG*HPLEFL
Trigger: CAAGAATTCCAAAGGATGCAACCCATCGGGGCACAC...AATACAATGTAAGAGAAGCAAATGCAGGGTGTCATGGGACTCAGGGGAAGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CAA 90 bp GAATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGTCGCAGGTTCAGGGGTaGTCACGGACTGTGTGTGCC +
Preference number: 5 (lower is better)
Translates to: EFHLLAIRRIYTWSVFGESQVQG*SRTVCA
Trigger: GGCACACACAGTCCGTGACAACCCCTGAACCTGCGA...CTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CAA 90 bp GAATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGTCTGTGGTGCTCCTGTaGGTTCAGGCTCTGGCGGTG +
Preference number: 5 (lower is better)
Translates to: EFHLLAIRRIYTWSVFGESVVLL*VQALAV
Trigger: CACCGCCAGAGCCTGAACCAACAGGAGCACCACAGA...CTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CAA 90 bp ACGCCCGGCCACCACTGCCATTTTCATCACTTAACCCGAACACATTCCTCTATTATACATGGAGCGTGTTaGGGGAGGAGATGGAGTAAG +
Preference number: 5 (lower is better)
Translates to: TPGHHCHFHHLTRTHSSIIHGAC*GRRWSK
Trigger: CTTACTCCATCTCCTCCCCAAACACGCTCCATGTAT...AATAGAGGAATGTGTTCGGGTTAAGTGATGAAAATGGCAGTGGTGGCCGGGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp AAATTGGCAACCACCCAACACAGCCCGGGTTCTCCCTCCTTGAGATGTGAATTTTTCCGTTCTAGGAAATaGGCAACCACCCAACACAGC +
Preference number: 5 (lower is better)
Translates to: KLATTQHSPGSPSLRCEFFRSRK*ATTQHS
Trigger: GCTGTGTTGGGTGGTTGCCAATTTCCTAGAACGGAA...AAATTCACATCTCAAGGAGGGAGAACCCGGGCTGTGTTGGGTGGTTGCCAATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS CCA 90 bp GTGCTGATTTGTTTACTTGGATTTGCCAACTGGTCCGATGGATACTaGGTCTGTTTGCACTTGAGCATCCAACATCCGCTTTGGTCCCAG +
Preference number: 5 (lower is better)
Translates to: VLICLLGFANWSDGY*VCLHLSIQHPLWSQ
Trigger: CTGGGACCAAAGCGGATGTTGGATGCTCAAGTGCAAACAGACCCAGTATCCATCGGACCAGTTGGCAAATCCAAGTAAACAAATCAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS CCA 90 bp GGGAACCGTGCTGATTTGTTTACTTGGATTTGCCAACTGGTCCGATaGATACTGGGTCTGTTTGCACTTGAGCATCCAACATCCGCTTTG +
Preference number: 5 (lower is better)
Translates to: GNRADLFTWICQLVR*ILGLFALEHPTSAL
Trigger: CAAAGCGGATGTTGGATGCTCAAGTGCAAACAGACCCAGTATCCATCGGACCAGTTGGCAAATCCAAGTAAACAAATCAGCACGGTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS CCA 90 bp AGAAGACACACTTCCCTGTGTACTTGGATTTGCCAACTGGTCCGATaGATACTGGGTCTGTTTGCACTTGAGCATCCAACATCCGCTTTG +
Preference number: 5 (lower is better)
Translates to: RRHTSLCTWICQLVR*ILGLFALEHPTSAL
Trigger: CAAAGCGGATGTTGGATGCTCAAGTGCAAACAGACCCAGTATCCATCGGACCAGTTGGCAAATCCAAGTACACAGGGAAGTGTGTCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CAA 90 bp CTCCCTTCTTCAAGCTTAGAGGATAAGCACGCATTTACTACAACGCTTAATTCCCCTCTTGGCTTCCTGTaGGCTGTCACCTGGCACCTT +
Preference number: 5 (lower is better)
Translates to: LPSSSLEDKHAFTTTLNSPLGFL*AVTWHL
Trigger: AAGGTGCCAGGTGACAGCCAACAGGAAGCCAAGAGG...GGAATTAAGCGTTGTAGTAAATGCGTGCTTATCCTCTAAGCTTGAAGAAGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp TCCTTGAGCTTCTTCCAAGATAGAGCAGATAAGGATGGAAACACAAACCAACCACCTCTTGGCTTCCTGTaGGCTGTCACCTGGCACCTT +
Preference number: 5 (lower is better)
Translates to: SLSFFQDRADKDGNTNQPPLGFL*AVTWHL
Trigger: AAGGTGCCAGGTGACAGCCAACAGGAAGCCAAGAGG...TGGTTGGTTTGTGTTTCCATCCTTATCTGCTCTATCTTGGAAGAAGCTCAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CAA 90 bp CCATTTTCATCACTTAACCCGAACACATTCCTCTATTCCCTCCCTTTCCTGCTTCTCATCCACCTTGTCTaGATGCTCTGCCCTCTTGGC +
Preference number: 5 (lower is better)
Translates to: PFSSLNPNTFLYSLPFLLLIHLV*MLCPLG
Trigger: GCCAAGAGGGCAGAGCATCAAGACAAGGTGGATGAG...AAGCAGGAAAGGGAGGGAATAGAGGAATGTGTTCGGGTTAAGTGATGAAAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp ACGCCCGGCCACCACTGCCATTTTCATCACTTAACCCGAACACATTCCTCTATTCGCAGTTCCAAGTTCTaGTCCTTCTTTTTCCTTGCC +
Preference number: 5 (lower is better)
Translates to: TPGHHCHFHHLTRTHSSIRSSKF*SFFFLA
Trigger: GGCAAGGAAAAAGAAGGACAAGAACTTGGAACTGCG...AATAGAGGAATGTGTTCGGGTTAAGTGATGAAAATGGCAGTGGTGGCCGGGCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp TGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCTGTCCTGGGATGTAAAGTaGGCTTTGTCTGACTTAAGG +
Preference number: 5 (lower is better)
Translates to: CLGRRWSKENTSWWQENLSWDVK*ALSDLR
Trigger: CCTTAAGTCAGACAAAGCCAACTTTACATCCCAGGA...CAGGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CAA 90 bp TCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGAGATGGTCCTGATTTCTCCTaGGTGCCTTCCTTCGCAGGT +
Preference number: 5 (lower is better)
Translates to: SFAGHQKNIYMERVWGGDGPDFS*VPSFAG
Trigger: ACCTGCGAAGGAAGGCACCAAGGAGAAATCAGGACC...ATCTCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CAA 90 bp TCCTTGAGCTTCTTCCAAGATAGAGCAGATAAGGATGGAAACACAAACCAACCATCGGCTGCTGACTTCTaGTCCTTCGAGGAGCCCTCT +
Preference number: 5 (lower is better)
Translates to: SLSFFQDRADKDGNTNQPSAADF*SFEEPS
Trigger: AGAGGGCTCCTCGAAGGACAAGAAGTCAGCAGCCGA...TGGTTGGTTTGTGTTTCCATCCTTATCTGCTCTATCTTGGAAGAAGCTCAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CAA 90 bp CGTGTTTGGGGAGGAGATGGAGTAAGGAGAACACATCTTGGTGGCAGGAGAACCCCATCAGAGAGGTTCTaGGTTTGCTTTCTTCTCTTT +
Preference number: 5 (lower is better)
Translates to: RVWGGDGVRRTHLGGRRTPSERF*VCFLLF
Trigger: AAAGAGAAGAAAGCAAACCAAGAACCTCTCTGATGG...GGTTCTCCTGCCACCAAGATGTGTTCTCCTTACTCCATCTCCTCCCCAAACACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395961.7
CDS-3UTR CAA 90 bp TGGCACTGCTTTGGAAGGTGGGGGCCGTCATTACACAAATCCCATGGGTGTGAACCATCAGAGAGGTTCTaGGTTTGCTTTCTTCTCTTT +
Preference number: 5 (lower is better)
Translates to: WHCFGRWGPSLHKSHGCEPSERF*VCFLLF
Trigger: AAAGAGAAGAAAGCAAACCAAGAACCTCTCTGATGG...TTCACACCCATGGGATTTGTGTAATGACGGCCCCCACCTTCCAAAGCAGTGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CAA 90 bp TCCTTGAGCTTCTTCCAAGATAGAGCAGATAAGGATGGAAACACAAACCAACCAGTGGACCCTGGGCTCTaGCACTTGCTGTTCTTCTGG +
Preference number: 5 (lower is better)
Translates to: SLSFFQDRADKDGNTNQPVDPGL*HLLFFW
Trigger: CCAGAAGAACAGCAAGTGCAAGAGCCCAGGGTCCAC...TGGTTGGTTTGTGTTTCCATCCTTATCTGCTCTATCTTGGAAGAAGCTCAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS TCA 90 bp TTATCTCCGTTGTCTCGGGGGAAGAAGTGGCCACATTATCCGTCTTaGCACTTATTCCCAAGTCGACTTCCTCTAAGTGCTGAACTGTGT +
Preference number: 5 (lower is better)
Translates to: LSPLSRGKKWPHYPS*HLFPSRLPLSAELC
Trigger: ACACAGTTCAGCACTTAGAGGAAGTCGACTTGGGAATAAGTGTCAAGACGGATAATGTGGCCACTTCTTCCCCCGAGACAACGGAGATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS CCA 90 bp AACCTGGTGGGAACCGTGCTGATTTGTTTACTTGGATTTGCCAACTaGTCCGATGGATACTGGGTCTGTTTGCACTTGAGCATCCAACAT +
Preference number: 5 (lower is better)
Translates to: NLVGTVLICLLGFAN*SDGYWVCLHLSIQH
Trigger: ATGTTGGATGCTCAAGTGCAAACAGACCCAGTATCCATCGGACCAGTTGGCAAATCCAAGTAAACAAATCAGCACGGTTCCCACCAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CAA 90 bp GTTTTATCAGAGCACATCCTGAGAACATTAGGAATGACAGACACACTTGAGATACTGGAGTCCTTGGGCTaGGAGGGAGCTTCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: VLSEHILRTLGMTDTLEILESLG*EGASPP
Trigger: AGGAGGAGAAGCTCCCTCCAAGCCCAAGGACTCCAG...TATCTCAAGTGTGTCTGTCATTCCTAATGTTCTCAGGATGTGCTCTGATAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp AATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGCTCATCCACCTTGTCTaGATGCTCTGCCCTCTTGGC +
Preference number: 5 (lower is better)
Translates to: NFICWPSEEYIHGACLGRLIHLV*MLCPLG
Trigger: GCCAAGAGGGCAGAGCATCAAGACAAGGTGGATGAG...CCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp AAATTGGCAACCACCCAACACAGCCCGGGTTCTCCCTCCTTGAGATGTGAATTTTGTCCTTCTTTTTCCTaGCCGTCAACTATGTCCTTC +
Preference number: 5 (lower is better)
Translates to: KLATTQHSPGSPSLRCEFCPSFS*PSTMSF
Trigger: GAAGGACATAGTTGACGGCAAGGAAAAAGAAGGACA...AAATTCACATCTCAAGGAGGGAGAACCCGGGCTGTGTTGGGTGGTTGCCAATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp CCATTTTCATCACTTAACCCGAACACATTCCTCTATTCCCTCCCTTTCCTGCTTATTCTTGCCAGCCCCTaGGGTCTCCTGGGATGTAAA +
Preference number: 5 (lower is better)
Translates to: PFSSLNPNTFLYSLPFLLILASP*GLLGCK
Trigger: TTTACATCCCAGGAGACCCAAGGGGCTGGCAAGAAT...AAGCAGGAAAGGGAGGGAATAGAGGAATGTGTTCGGGTTAAGTGATGAAAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp GAATTCTTTTATGGTTACCAGTCAAAAAGTCACCGTCAGCTGGAACTGGAAGGGATTCTTGCCAGCCCCTaGGGTCTCCTGGGATGTAAA +
Preference number: 5 (lower is better)
Translates to: EFFYGYQSKSHRQLELEGILASP*GLLGCK
Trigger: TTTACATCCCAGGAGACCCAAGGGGCTGGCAAGAAT...CCCTTCCAGTTCCAGCTGACGGTGACTTTTTGACTGGTAACCATAAAAGAATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CAA 90 bp CCATTTTCATCACTTAACCCGAACACATTCCTCTATTCCCTCCCTTTCCTGCTTGATGGGTTGCATCCTTaGGAATTCTTGCCAGCCCCT +
Preference number: 5 (lower is better)
Translates to: PFSSLNPNTFLYSLPFLLDGLHP*EFLPAP
Trigger: AGGGGCTGGCAAGAATTCCAAAGGATGCAACCCATC...AAGCAGGAAAGGGAGGGAATAGAGGAATGTGTTCGGGTTAAGTGATGAAAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp GAATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGGTCCTGATTTCTCCTaGGTGCCTTCCTTCGCAGGT +
Preference number: 5 (lower is better)
Translates to: EFHLLAIRRIYTWSVFGEGPDFS*VPSFAG
Trigger: ACCTGCGAAGGAAGGCACCAAGGAGAAATCAGGACC...CTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CAA 90 bp TCCTTGAGCTTCTTCCAAGATAGAGCAGATAAGGATGGAAACACAAACCAACCAGGTCCTGATTTCTCCTaGGTGCCTTCCTTCGCAGGT +
Preference number: 5 (lower is better)
Translates to: SLSFFQDRADKDGNTNQPGPDFS*VPSFAG
Trigger: ACCTGCGAAGGAAGGCACCAAGGAGAAATCAGGACC...TGGTTGGTTTGTGTTTCCATCCTTATCTGCTCTATCTTGGAAGAAGCTCAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CAA 90 bp TTATTAACTGAGGTTATGGGGAGGGTTTTATCAGAGCACATCCTGAGAACATTATCTGTGGTGCTCCTGTaGGTTCAGGCTCTGGCGGTG +
Preference number: 5 (lower is better)
Translates to: LLTEVMGRVLSEHILRTLSVVLL*VQALAV
Trigger: CACCGCCAGAGCCTGAACCAACAGGAGCACCACAGA...TAATGTTCTCAGGATGTGCTCTGATAAAACCCTCCCCATAACCTCAGTTAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp CTCCCTTCTTCAAGCTTAGAGGATAAGCACGCATTTACTACAACGCTTAATTCCCACTGGGCTGGTTCTTaGGCTTCCTGCTTGTTGCTC +
Preference number: 5 (lower is better)
Translates to: LPSSSLEDKHAFTTTLNSHWAGS*ASCLLL
Trigger: GAGCAACAAGCAGGAAGCCAAAGAACCAGCCCAGTG...GGAATTAAGCGTTGTAGTAAATGCGTGCTTATCCTCTAAGCTTGAAGAAGGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp TCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGAGATGGTCTCTTTTGGAGCTaGTCCCCATTCTGCAGTGAG +
Preference number: 5 (lower is better)
Translates to: SFAGHQKNIYMERVWGGDGLFWS*SPFCSE
Trigger: CTCACTGCAGAATGGGGACAAGCTCCAAAAGAGACC...ATCTCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CAA 90 bp TTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGAGGGTCTCTTTTGGAGCTaGTCCCCATTCTGCAGTGAG +
Preference number: 5 (lower is better)
Translates to: FHLLAIRRIYTWSVFGEEGLFWS*SPFCSE
Trigger: CTCACTGCAGAATGGGGACAAGCTCCAAAAGAGACC...CTCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CAA 90 bp AAATTGGCAACCACCCAACACAGCCCGGGTTCTCCCTCCTTGAGATGTGAATTTGGGAACCGTGCTGATTaGTTTACTTGGATTTGCCAA +
Preference number: 5 (lower is better)
Translates to: KLATTQHSPGSPSLRCEFGNRAD*FTWICQ
Trigger: TTGGCAAATCCAAGTAAACAAATCAGCACGGTTCCC...AAATTCACATCTCAAGGAGGGAGAACCCGGGCTGTGTTGGGTGGTTGCCAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp TTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGAGCCCTCCCTTTCCTGCTaGGTGATCATCGACTCTTCT +
Preference number: 5 (lower is better)
Translates to: FHLLAIRRIYTWSVFGEEPSLSC*VIIDSS
Trigger: AGAAGAGTCGATGATCACCAAGCAGGAAAGGGAGGG...CTCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp GTGCCTTCCCCTGAGTCCCATGACACCCTGCATTTGCTTCTCTTACATTGTATTTGTCTTCTGACCAGCTaGTCCATCACAGACACTTTC +
Preference number: 5 (lower is better)
Translates to: VPSPESHDTLHLLLLHCICLLTS*SITDTF
Trigger: GAAAGTGTCTGTGATGGACAAGCTGGTCAGAAGACA...AATACAATGTAAGAGAAGCAAATGCAGGGTGTCATGGGACTCAGGGGAAGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CAA 90 bp TGGCACTGCTTTGGAAGGTGGGGGCCGTCATTACACAAATCCCATGGGTGTGAAATTATTATTATCTTTTaGCCTGCCTGTCTCTCCCAC +
Preference number: 5 (lower is better)
Translates to: WHCFGRWGPSLHKSHGCEIIIIF*PACLSH
Trigger: GTGGGAGAGACAGGCAGGCAAAAAGATAATAATAAT...TTCACACCCATGGGATTTGTGTAATGACGGCCCCCACCTTCCAAAGCAGTGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS TCA 90 bp CCATTTCAGCTCAATAGCTCCATTCCTGGAAAGGCCACTTCTTCTTaGCATGGGAGAAGACACACTTCCCTGTGTACTTGGATTTGCCAA +
Preference number: 5 (lower is better)
Translates to: PFQLNSSIPGKATSS*HGRRHTSLCTWICQ
Trigger: TTGGCAAATCCAAGTACACAGGGAAGTGTGTCTTCTCCCATGTCAAGAAGAAGTGGCCTTTCCAGGAATGGAGCTATTGAGCTGAAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS CCA 90 bp CATGGCTCCCCATTGCCGTCAAGAGACAATTTAAACTCGTTACTATaGACTTTTTACTCCAAGTCCTTGAGATCCATCTGTGCCACCTCC +
Preference number: 5 (lower is better)
Translates to: HGSPLPSRDNLNSLL*TFYSKSLRSICATS
Trigger: GGAGGTGGCACAGATGGATCTCAAGGACTTGGAGTAAAAAGTCCATAGTAACGAGTTTAAATTGTCTCTTGACGGCAATGGGGAGCCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CAA 90 bp CTCCCTTCTTCAAGCTTAGAGGATAAGCACGCATTTACTACAACGCTTAATTCCTCATTTGGTTACCCATaGCTCCTGCTGAGCCCCTGT +
Preference number: 5 (lower is better)
Translates to: LPSSSLEDKHAFTTTLNSSFGYP*LLLSPC
Trigger: ACAGGGGCTCAGCAGGAGCAATGGGTAACCAAATGA...GGAATTAAGCGTTGTAGTAAATGCGTGCTTATCCTCTAAGCTTGAAGAAGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp TTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGAGTTGGGGAACACTCATTaGGTTACCCATTGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: FHLLAIRRIYTWSVFGEELGNTH*VTHCSC
Trigger: GCAGGAGCAATGGGTAACCAAATGAGTGTTCCCCAA...CTCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp GTGCCTTCCCCTGAGTCCCATGACACCCTGCATTTGCTTCTCTTACATTGTATTTCCTGGGATGTAAAGTaGGCTTTGTCTGACTTAAGG +
Preference number: 5 (lower is better)
Translates to: VPSPESHDTLHLLLLHCISWDVK*ALSDLR
Trigger: CCTTAAGTCAGACAAAGCCAACTTTACATCCCAGGA...AATACAATGTAAGAGAAGCAAATGCAGGGTGTCATGGGACTCAGGGGAAGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CAA 90 bp CTCCCTTCTTCAAGCTTAGAGGATAAGCACGCATTTACTACAACGCTTAATTCCGATGGGTTGCATCCTTaGGAATTCTTGCCAGCCCCT +
Preference number: 5 (lower is better)
Translates to: LPSSSLEDKHAFTTTLNSDGLHP*EFLPAP
Trigger: AGGGGCTGGCAAGAATTCCAAAGGATGCAACCCATC...GGAATTAAGCGTTGTAGTAAATGCGTGCTTATCCTCTAAGCTTGAAGAAGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp AATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGGTGTGCCCCGATGGGTaGCATCCTTTGGAATTCTTG +
Preference number: 5 (lower is better)
Translates to: NFICWPSEEYIHGACLGRVCPDG*HPLEFL
Trigger: CAAGAATTCCAAAGGATGCAACCCATCGGGGCACAC...CCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CAA 90 bp TCCTTGAGCTTCTTCCAAGATAGAGCAGATAAGGATGGAAACACAAACCAACCAGGTCTCTTTTGGAGCTaGTCCCCATTCTGCAGTGAG +
Preference number: 5 (lower is better)
Translates to: SLSFFQDRADKDGNTNQPGLFWS*SPFCSE
Trigger: CTCACTGCAGAATGGGGACAAGCTCCAAAAGAGACC...TGGTTGGTTTGTGTTTCCATCCTTATCTGCTCTATCTTGGAAGAAGCTCAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CAA 90 bp CCATTTTCATCACTTAACCCGAACACATTCCTCTATTCCCTCCCTTTCCTGCTTATACATGGAGCGTGTTaGGGGAGGAGATGGAGTAAG +
Preference number: 5 (lower is better)
Translates to: PFSSLNPNTFLYSLPFLLIHGAC*GRRWSK
Trigger: CTTACTCCATCTCCTCCCCAAACACGCTCCATGTAT...AAGCAGGAAAGGGAGGGAATAGAGGAATGTGTTCGGGTTAAGTGATGAAAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp GAATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGCGGGGTTTCATGATGTaGGCCAGGCTAGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: EFHLLAIRRIYTWSVFGERGFMM*ARLVLN
Trigger: GTTCAAGACTAGCCTGGCCAACATCATGAAACCCCG...CTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp GAATTCTTTTATGGTTACCAGTCAAAAAGTCACCGTCAGCTGGAACTGGAAGGGGCAGCATCTCCTTCGTaGAGGTCCACTGTTTGTAAG +
Preference number: 5 (lower is better)
Translates to: EFFYGYQSKSHRQLELEGAASPS*RSTVCK
Trigger: CTTACAAACAGTGGACCTCAACGAAGGAGATGCTGC...CCCTTCCAGTTCCAGCTGACGGTGACTTTTTGACTGGTAACCATAAAAGAATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS GCA 90 bp TTTAAAGAAACTCATGATGGAATTATTATTCTCTGCTATAGCTGCTaGCTGGGAATCGTCCTTTGCAGTCTCCAGTCCTTCTGGGTCCCC +
Preference number: 5 (lower is better)
Translates to: FKETHDGIIILCYSC*LGIVLCSLQSFWVP
Trigger: GGGGACCCAGAAGGACTGGAGACTGCAAAGGACGATTCCCAGGCAGCAGCTATAGCAGAGAATAATAATTCCATCATGAGTTTCTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000448484.5
CDS-3UTR CAA 90 bp ATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGACCAAGATTCTTTCCGTaGGCATCCGCAACAGCACTT +
Preference number: 5 (lower is better)
Translates to: ISFAGHQKNIYMERVWGGPRFFP*ASATAL
Trigger: AAGTGCTGTTGCGGATGCCAACGGAAAGAATCTTGG...TCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp TCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGAGATCGCAGTTCCAAGTTCTaGTCCTTCTTTTTCCTTGCC +
Preference number: 5 (lower is better)
Translates to: SFAGHQKNIYMERVWGGDRSSKF*SFFFLA
Trigger: GGCAAGGAAAAAGAAGGACAAGAACTTGGAACTGCG...ATCTCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp ATTTCCTCATTATCGTTGTTAGCTGGAAGAGAGTCTCAGAGAATCAAAGCCAAACCTGGGAATCGTCCTTaGCAGTCTCCAGTCCTTCTG +
Preference number: 5 (lower is better)
Translates to: ISSLSLLAGRESQRIKAKPGNRP*QSPVLL
Trigger: CAGAAGGACTGGAGACTGCAAAGGACGATTCCCAGG...TTTGGCTTTGATTCTCTGAGACTCTCTTCCAGCTAACAACGATAATGAGGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CAA 90 bp TCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGAGATTTTTTCCAAAACAGTTaGCCCAGAGGCAGAGAGGTG +
Preference number: 5 (lower is better)
Translates to: SFAGHQKNIYMERVWGGDFFQNS*PRGREV
Trigger: CACCTCTCTGCCTCTGGGCAAACTGTTTTGGAAAAA...ATCTCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CAA 90 bp GAATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGTTGTTGCTCTTCTGCTaGTTCATCTCGGCTGCTGAC +
Preference number: 5 (lower is better)
Translates to: EFHLLAIRRIYTWSVFGELLLFC*FISAAD
Trigger: GTCAGCAGCCGAGATGAACAAGCAGAAGAGCAACAA...CTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CAA 90 bp CTCCCTTCTTCAAGCTTAGAGGATAAGCACGCATTTACTACAACGCTTAATTCCTTGTTGCTCTTCTGCTaGTTCATCTCGGCTGCTGAC +
Preference number: 5 (lower is better)
Translates to: LPSSSLEDKHAFTTTLNSLLLFC*FISAAD
Trigger: GTCAGCAGCCGAGATGAACAAGCAGAAGAGCAACAA...GGAATTAAGCGTTGTAGTAAATGCGTGCTTATCCTCTAAGCTTGAAGAAGGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp AATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGTTGTTGCTCTTCTGCTaGTTCATCTCGGCTGCTGAC +
Preference number: 5 (lower is better)
Translates to: NFICWPSEEYIHGACLGRLLLFC*FISAAD
Trigger: GTCAGCAGCCGAGATGAACAAGCAGAAGAGCAACAA...CCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CAA 90 bp CCATTTTCATCACTTAACCCGAACACATTCCTCTATTCCCTCCCTTTCCTGCTTTCTTTGGCTTCCTGCTaGTTGCTCTTCTGCTTGTTC +
Preference number: 5 (lower is better)
Translates to: PFSSLNPNTFLYSLPFLLSLASC*LLFCLF
Trigger: GAACAAGCAGAAGAGCAACAAGCAGGAAGCCAAAGA...AAGCAGGAAAGGGAGGGAATAGAGGAATGTGTTCGGGTTAAGTGATGAAAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp TCTCCCACAGACATGAAAGCAAGCTTTTATGTACTTAGGTTGGATTTCAACCTTCACTGGGCTGGTTCTTaGGCTTCCTGCTTGTTGCTC +
Preference number: 5 (lower is better)
Translates to: SPTDMKASFYVLRLDFNLHWAGS*ASCLLL
Trigger: GAGCAACAAGCAGGAAGCCAAAGAACCAGCCCAGTG...AAGGTTGAAATCCAACCTAAGTACATAAAAGCTTGCTTTCATGTCTGTGGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CAA 90 bp GAATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGTTCCGTTCTAGGAAATaGGCAACCACCCAACACAGC +
Preference number: 5 (lower is better)
Translates to: EFHLLAIRRIYTWSVFGEFRSRK*ATTQHS
Trigger: GCTGTGTTGGGTGGTTGCCAATTTCCTAGAACGGAA...CTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp GTTTTATCAGAGCACATCCTGAGAACATTAGGAATGACAGACACACTTGAGATAGACCTTGCCGCCCCCTaGTGTTGCAAAATAACCGTG +
Preference number: 5 (lower is better)
Translates to: VLSEHILRTLGMTDTLEIDLAAP*CCKITV
Trigger: CACGGTTATTTTGCAACACAAGGGGGCGGCAAGGTC...TATCTCAAGTGTGTCTGTCATTCCTAATGTTCTCAGGATGTGCTCTGATAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp TTATTAACTGAGGTTATGGGGAGGGTTTTATCAGAGCACATCCTGAGAACATTAGACCTTGCCGCCCCCTaGTGTTGCAAAATAACCGTG +
Preference number: 5 (lower is better)
Translates to: LLTEVMGRVLSEHILRTLDLAAP*CCKITV
Trigger: CACGGTTATTTTGCAACACAAGGGGGCGGCAAGGTC...TAATGTTCTCAGGATGTGCTCTGATAAAACCCTCCCCATAACCTCAGTTAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp GAATTCTTTTATGGTTACCAGTCAAAAAGTCACCGTCAGCTGGAACTGGAAGGGAAAGGCCACTTCTTCTaGACATGGGAGAAGACACAC +
Preference number: 5 (lower is better)
Translates to: EFFYGYQSKSHRQLELEGKGHFF*TWEKTH
Trigger: GTGTGTCTTCTCCCATGTCAAGAAGAAGTGGCCTTT...CCCTTCCAGTTCCAGCTGACGGTGACTTTTTGACTGGTAACCATAAAAGAATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CAA 90 bp GTGCCTTCCCCTGAGTCCCATGACACCCTGCATTTGCTTCTCTTACATTGTATTCAGAGTTTAAATCACTaGCTCTTTAGTTGGGAGTGG +
Preference number: 5 (lower is better)
Translates to: VPSPESHDTLHLLLLHCIQSLNH*LFSWEW
Trigger: CCACTCCCAACTAAAGAGCAAGTGATTTAAACTCTG...AATACAATGTAAGAGAAGCAAATGCAGGGTGTCATGGGACTCAGGGGAAGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CAA 90 bp AATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGGCCACATTATCCGTCTaGACACTTATTCCCAAGTCG +
Preference number: 5 (lower is better)
Translates to: NFICWPSEEYIHGACLGRATLSV*TLIPKS
Trigger: CGACTTGGGAATAAGTGTCAAGACGGATAATGTGGC...CCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp TTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGAGACCTTTTCCTGTCCCTaGTCCAGCTTGAAGAATTTG +
Preference number: 5 (lower is better)
Translates to: FHLLAIRRIYTWSVFGEETFSCP*SSLKNL
Trigger: CAAATTCTTCAAGCTGGACAAGGGACAGGAAAAGGT...CTCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp TTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGAGTGTCCTTCTTTTTCCTaGCCGTCAACTATGTCCTTC +
Preference number: 5 (lower is better)
Translates to: FHLLAIRRIYTWSVFGEECPSFS*PSTMSF
Trigger: GAAGGACATAGTTGACGGCAAGGAAAAAGAAGGACA...CTCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp CCATTTTCATCACTTAACCCGAACACATTCCTCTATTCCCTCCCTTTCCTGCTTTCCTGGGATGTAAAGTaGGCTTTGTCTGACTTAAGG +
Preference number: 5 (lower is better)
Translates to: PFSSLNPNTFLYSLPFLLSWDVK*ALSDLR
Trigger: CCTTAAGTCAGACAAAGCCAACTTTACATCCCAGGA...AAGCAGGAAAGGGAGGGAATAGAGGAATGTGTTCGGGTTAAGTGATGAAAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp TCTCCCACAGACATGAAAGCAAGCTTTTATGTACTTAGGTTGGATTTCAACCTTGATGGGTTGCATCCTTaGGAATTCTTGCCAGCCCCT +
Preference number: 5 (lower is better)
Translates to: SPTDMKASFYVLRLDFNLDGLHP*EFLPAP
Trigger: AGGGGCTGGCAAGAATTCCAAAGGATGCAACCCATC...AAGGTTGAAATCCAACCTAAGTACATAAAAGCTTGCTTTCATGTCTGTGGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CAA 90 bp GAATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGTTTTTCCAAAACAGTTaGCCCAGAGGCAGAGAGGTG +
Preference number: 5 (lower is better)
Translates to: EFHLLAIRRIYTWSVFGEFFQNS*PRGREV
Trigger: CACCTCTCTGCCTCTGGGCAAACTGTTTTGGAAAAA...CTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CAA 90 bp GAATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGTCTTTGGCTTCCTGCTaGTTGCTCTTCTGCTTGTTC +
Preference number: 5 (lower is better)
Translates to: EFHLLAIRRIYTWSVFGESLASC*LLFCLF
Trigger: GAACAAGCAGAAGAGCAACAAGCAGGAAGCCAAAGA...CTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CAA 90 bp AATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGGGATACTGGGTCTGTTaGCACTTGAGCATCCAACAT +
Preference number: 5 (lower is better)
Translates to: NFICWPSEEYIHGACLGRGYWVC*HLSIQH
Trigger: ATGTTGGATGCTCAAGTGCAAACAGACCCAGTATCC...CCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CAA 90 bp GAATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGGATACTGGGTCTGTTaGCACTTGAGCATCCAACAT +
Preference number: 5 (lower is better)
Translates to: EFHLLAIRRIYTWSVFGEGYWVC*HLSIQH
Trigger: ATGTTGGATGCTCAAGTGCAAACAGACCCAGTATCC...CTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CAA 90 bp TTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGAGGGGAACCGTGCTGATTaGTTTACTTGGATTTGCCAA +
Preference number: 5 (lower is better)
Translates to: FHLLAIRRIYTWSVFGEEGNRAD*FTWICQ
Trigger: TTGGCAAATCCAAGTAAACAAATCAGCACGGTTCCC...CTCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CAA 90 bp GTTTTATCAGAGCACATCCTGAGAACATTAGGAATGACAGACACACTTGAGATATGCCGCCCCCTTGTGTaGCAAAATAACCGTGCAACT +
Preference number: 5 (lower is better)
Translates to: VLSEHILRTLGMTDTLEICRPLV*QNNRAT
Trigger: AGTTGCACGGTTATTTTGCAACACAAGGGGGCGGCA...TATCTCAAGTGTGTCTGTCATTCCTAATGTTCTCAGGATGTGCTCTGATAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp GTGCCTTCCCCTGAGTCCCATGACACCCTGCATTTGCTTCTCTTACATTGTATTAGAGAGGTTCTTGGTTaGCTTTCTTCTCTTTTGAGT +
Preference number: 5 (lower is better)
Translates to: VPSPESHDTLHLLLLHCIREVLG*LSSLLS
Trigger: ACTCAAAAGAGAAGAAAGCAAACCAAGAACCTCTCT...AATACAATGTAAGAGAAGCAAATGCAGGGTGTCATGGGACTCAGGGGAAGGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CAA 90 bp TCTCCCACAGACATGAAAGCAAGCTTTTATGTACTTAGGTTGGATTTCAACCTTTCCAGGTGCTTTTTCTaGGTGCCTCTAGCCTGGATC +
Preference number: 5 (lower is better)
Translates to: SPTDMKASFYVLRLDFNLSRCFF*VPLAWI
Trigger: GATCCAGGCTAGAGGCACCAAGAAAAAGCACCTGGA...AAGGTTGAAATCCAACCTAAGTACATAAAAGCTTGCTTTCATGTCTGTGGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CAA 90 bp ATTTCCTCATTATCGTTGTTAGCTGGAAGAGAGTCTCAGAGAATCAAAGCCAAACACTTCCCTGTGTACTaGGATTTGCCAACTGGTCCG +
Preference number: 5 (lower is better)
Translates to: ISSLSLLAGRESQRIKAKHFPVY*DLPTGP
Trigger: CGGACCAGTTGGCAAATCCAAGTACACAGGGAAGTG...TTTGGCTTTGATTCTCTGAGACTCTCTTCCAGCTAACAACGATAATGAGGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CAA 90 bp GTGCCTTCCCCTGAGTCCCATGACACCCTGCATTTGCTTCTCTTACATTGTATTATCACACAATCTTCCTaGAGCTTCTTCCAAGATAGA +
Preference number: 5 (lower is better)
Translates to: VPSPESHDTLHLLLLHCIITQSS*SFFQDR
Trigger: TCTATCTTGGAAGAAGCTCAAGGAAGATTGTGTGAT...AATACAATGTAAGAGAAGCAAATGCAGGGTGTCATGGGACTCAGGGGAAGGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CAA 90 bp TCCTTGAGCTTCTTCCAAGATAGAGCAGATAAGGATGGAAACACAAACCAACCATTTTACTCCAAGTCCTaGAGATCCATCTGTGCCACC +
Preference number: 5 (lower is better)
Translates to: SLSFFQDRADKDGNTNQPFYSKS*RSICAT
Trigger: GGTGGCACAGATGGATCTCAAGGACTTGGAGTAAAA...TGGTTGGTTTGTGTTTCCATCCTTATCTGCTCTATCTTGGAAGAAGCTCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS GCA 90 bp AGTTTTAAAGAAACTCATGATGGAATTATTATTCTCTGCTATAGCTaGTGCCTGGGAATCGTCCTTTGCAGTCTCCAGTCCTTCTGGGTC +
Preference number: 5 (lower is better)
Translates to: SFKETHDGIIILCYS*CLGIVLCSLQSFWV
Trigger: GACCCAGAAGGACTGGAGACTGCAAAGGACGATTCCCAGGCAGCAGCTATAGCAGAGAATAATAATTCCATCATGAGTTTCTTTAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000448484.5
CDS-3UTR CAA 90 bp GTTTTATCAGAGCACATCCTGAGAACATTAGGAATGACAGACACACTTGAGATATTGGGGAACACTCATTaGGTTACCCATTGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: VLSEHILRTLGMTDTLEILGNTH*VTHCSC
Trigger: GCAGGAGCAATGGGTAACCAAATGAGTGTTCCCCAA...TATCTCAAGTGTGTCTGTCATTCCTAATGTTCTCAGGATGTGCTCTGATAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp GTTTTATCAGAGCACATCCTGAGAACATTAGGAATGACAGACACACTTGAGATACCAAGATTCTTTCCGTaGGCATCCGCAACAGCACTT +
Preference number: 5 (lower is better)
Translates to: VLSEHILRTLGMTDTLEIPRFFP*ASATAL
Trigger: AAGTGCTGTTGCGGATGCCAACGGAAAGAATCTTGG...TATCTCAAGTGTGTCTGTCATTCCTAATGTTCTCAGGATGTGCTCTGATAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp CTTACAAGGACCCTATTTGAAAAACAACGCTTATTCATTCCTTTTTCTATACCCGTGTCCAGCTCTCACTaGGGTCTTTGTTCGCTGGAG +
Preference number: 5 (lower is better)
Translates to: LTRTLFEKQRLFIPFSIPVSSSH*GLCSLE
Trigger: CTCCAGCGAACAAAGACCCAAGTGAGAGCTGGACAC...GGGTATAGAAAAAGGAATGAATAAGCGTTGTTTTTCAAATAGGGTCCTTGTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp TCCTTGAGCTTCTTCCAAGATAGAGCAGATAAGGATGGAAACACAAACCAACCAACCTTTTCCTGTCCCTaGTCCAGCTTGAAGAATTTG +
Preference number: 5 (lower is better)
Translates to: SLSFFQDRADKDGNTNQPTFSCP*SSLKNL
Trigger: CAAATTCTTCAAGCTGGACAAGGGACAGGAAAAGGT...TGGTTGGTTTGTGTTTCCATCCTTATCTGCTCTATCTTGGAAGAAGCTCAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CAA 90 bp TCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGAGATGATGTAAAGTTGGCTTaGTCTGACTTAAGGTCAGCT +
Preference number: 5 (lower is better)
Translates to: SFAGHQKNIYMERVWGGDDVKLA*SDLRSA
Trigger: AGCTGACCTTAAGTCAGACAAAGCCAACTTTACATC...ATCTCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CAA 90 bp TCTCCCACAGACATGAAAGCAAGCTTTTATGTACTTAGGTTGGATTTCAACCTTTTGTTGCTCTTCTGCTaGTTCATCTCGGCTGCTGAC +
Preference number: 5 (lower is better)
Translates to: SPTDMKASFYVLRLDFNLLLLFC*FISAAD
Trigger: GTCAGCAGCCGAGATGAACAAGCAGAAGAGCAACAA...AAGGTTGAAATCCAACCTAAGTACATAAAAGCTTGCTTTCATGTCTGTGGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CAA 90 bp TTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGAGTTTGTTTACTTGGATTaGCCAACTGGTCCGATGGAT +
Preference number: 5 (lower is better)
Translates to: FHLLAIRRIYTWSVFGEEFVYLD*PTGPMD
Trigger: ATCCATCGGACCAGTTGGCAAATCCAAGTAAACAAA...CTCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CAA 90 bp CCATTTTCATCACTTAACCCGAACACATTCCTCTATTCCCTCCCTTTCCTGCTTTTTGTTTACTTGGATTaGCCAACTGGTCCGATGGAT +
Preference number: 5 (lower is better)
Translates to: PFSSLNPNTFLYSLPFLLFVYLD*PTGPMD
Trigger: ATCCATCGGACCAGTTGGCAAATCCAAGTAAACAAA...AAGCAGGAAAGGGAGGGAATAGAGGAATGTGTTCGGGTTAAGTGATGAAAATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp TCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGAGATTTTGTTTACTTGGATTaGCCAACTGGTCCGATGGAT +
Preference number: 5 (lower is better)
Translates to: SFAGHQKNIYMERVWGGDFVYLD*PTGPMD
Trigger: ATCCATCGGACCAGTTGGCAAATCCAAGTAAACAAA...ATCTCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CAA 90 bp AATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGGGGAACCGTGCTGATTaGTTTACTTGGATTTGCCAA +
Preference number: 5 (lower is better)
Translates to: NFICWPSEEYIHGACLGRGNRAD*FTWICQ
Trigger: TTGGCAAATCCAAGTAAACAAATCAGCACGGTTCCC...CCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CAA 90 bp TCTCCCACAGACATGAAAGCAAGCTTTTATGTACTTAGGTTGGATTTCAACCTTCCTGTGTACTTGGATTaGCCAACTGGTCCGATGGAT +
Preference number: 5 (lower is better)
Translates to: SPTDMKASFYVLRLDFNLPVYLD*PTGPMD
Trigger: ATCCATCGGACCAGTTGGCAAATCCAAGTACACAGG...AAGGTTGAAATCCAACCTAAGTACATAAAAGCTTGCTTTCATGTCTGTGGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CAA 90 bp GTGCCTTCCCCTGAGTCCCATGACACCCTGCATTTGCTTCTCTTACATTGTATTATTTTGGTTTCTATTTaGTTATGTGCCTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: VPSPESHDTLHLLLLHCIILVSI*LCASFS
Trigger: GGAGAAGGAGGCACATAACAAAATAGAAACCAAAAT...AATACAATGTAAGAGAAGCAAATGCAGGGTGTCATGGGACTCAGGGGAAGGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CAA 90 bp GAATTCTTTTATGGTTACCAGTCAAAAAGTCACCGTCAGCTGGAACTGGAAGGGATTGTCAGATTCAGATaGGAGAAATCTGCACCCTTC +
Preference number: 5 (lower is better)
Translates to: EFFYGYQSKSHRQLELEGIVRFR*EKSAPF
Trigger: GAAGGGTGCAGATTTCTCCAATCTGAATCTGACAAT...CCCTTCCAGTTCCAGCTGACGGTGACTTTTTGACTGGTAACCATAAAAGAATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CAA 90 bp TCTCCCACAGACATGAAAGCAAGCTTTTATGTACTTAGGTTGGATTTCAACCTTTACTGCCATGGCGACTaGGCCACCGTTATAAGTAGA +
Preference number: 5 (lower is better)
Translates to: SPTDMKASFYVLRLDFNLYCHGD*ATVISR
Trigger: TCTACTTATAACGGTGGCCAAGTCGCCATGGCAGTA...AAGGTTGAAATCCAACCTAAGTACATAAAAGCTTGCTTTCATGTCTGTGGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CAA 90 bp GTTTTATCAGAGCACATCCTGAGAACATTAGGAATGACAGACACACTTGAGATACTCTCACTTGGGTCTTaGTTCGCTGGAGCTTTATTG +
Preference number: 5 (lower is better)
Translates to: VLSEHILRTLGMTDTLEILSLGS*FAGALL
Trigger: CAATAAAGCTCCAGCGAACAAAGACCCAAGTGAGAG...TATCTCAAGTGTGTCTGTCATTCCTAATGTTCTCAGGATGTGCTCTGATAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp TCTCCCACAGACATGAAAGCAAGCTTTTATGTACTTAGGTTGGATTTCAACCTTCGCAGTTCCAAGTTCTaGTCCTTCTTTTTCCTTGCC +
Preference number: 5 (lower is better)
Translates to: SPTDMKASFYVLRLDFNLRSSKF*SFFFLA
Trigger: GGCAAGGAAAAAGAAGGACAAGAACTTGGAACTGCG...AAGGTTGAAATCCAACCTAAGTACATAAAAGCTTGCTTTCATGTCTGTGGGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CAA 90 bp ATTTCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGAGATGTAAAGTTGGCTTaGTCTGACTTAAGGTCAGCT +
Preference number: 5 (lower is better)
Translates to: ISFAGHQKNIYMERVWGGDVKLA*SDLRSA
Trigger: AGCTGACCTTAAGTCAGACAAAGCCAACTTTACATC...TCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS-3UTR CAA 90 bp TCCTTGAGCTTCTTCCAAGATAGAGCAGATAAGGATGGAAACACAAACCAACCAGATGTAAAGTTGGCTTaGTCTGACTTAAGGTCAGCT +
Preference number: 5 (lower is better)
Translates to: SLSFFQDRADKDGNTNQPDVKLA*SDLRSA
Trigger: AGCTGACCTTAAGTCAGACAAAGCCAACTTTACATC...TGGTTGGTTTGTGTTTCCATCCTTATCTGCTCTATCTTGGAAGAAGCTCAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CAA 90 bp ATTTCCTCATTATCGTTGTTAGCTGGAAGAGAGTCTCAGAGAATCAAAGCCAAAGGATACTGGGTCTGTTaGCACTTGAGCATCCAACAT +
Preference number: 5 (lower is better)
Translates to: ISSLSLLAGRESQRIKAKGYWVC*HLSIQH
Trigger: ATGTTGGATGCTCAAGTGCAAACAGACCCAGTATCC...TTTGGCTTTGATTCTCTGAGACTCTCTTCCAGCTAACAACGATAATGAGGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CAA 90 bp TCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGAGATCATCTTTACTGTTATTaGCCAGAAAAGACTGGACCA +
Preference number: 5 (lower is better)
Translates to: SFAGHQKNIYMERVWGGDHLYCY*PEKTGP
Trigger: TGGTCCAGTCTTTTCTGGCAAATAACAGTAAAGATG...ATCTCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp CCATTTTCATCACTTAACCCGAACACATTCCTCTATTCCCTCCCTTTCCTGCTTCATCTTTACTGTTATTaGCCAGAAAAGACTGGACCA +
Preference number: 5 (lower is better)
Translates to: PFSSLNPNTFLYSLPFLLHLYCY*PEKTGP
Trigger: TGGTCCAGTCTTTTCTGGCAAATAACAGTAAAGATG...AAGCAGGAAAGGGAGGGAATAGAGGAATGTGTTCGGGTTAAGTGATGAAAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp CCATTTTCATCACTTAACCCGAACACATTCCTCTATTCCCTCCCTTTCCTGCTTAGAGAGGTTCTTGGTTaGCTTTCTTCTCTTTTGAGT +
Preference number: 5 (lower is better)
Translates to: PFSSLNPNTFLYSLPFLLREVLG*LSSLLS
Trigger: ACTCAAAAGAGAAGAAAGCAAACCAAGAACCTCTCT...AAGCAGGAAAGGGAGGGAATAGAGGAATGTGTTCGGGTTAAGTGATGAAAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395961.7
CDS-3UTR CAA 90 bp GAATTCTTTTATGGTTACCAGTCAAAAAGTCACCGTCAGCTGGAACTGGAAGGGCATGACACCCTGCATTaGCTTCTCTTACATTGTATT +
Preference number: 5 (lower is better)
Translates to: EFFYGYQSKSHRQLELEGHDTLH*LLLHCI
Trigger: AATACAATGTAAGAGAAGCAAATGCAGGGTGTCATG...CCCTTCCAGTTCCAGCTGACGGTGACTTTTTGACTGGTAACCATAAAAGAATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CAA 90 bp ATTTCCTCATTATCGTTGTTAGCTGGAAGAGAGTCTCAGAGAATCAAAGCCAAATGTCCTTCTTTTTCCTaGCCGTCAACTATGTCCTTC +
Preference number: 5 (lower is better)
Translates to: ISSLSLLAGRESQRIKAKCPSFS*PSTMSF
Trigger: GAAGGACATAGTTGACGGCAAGGAAAAAGAAGGACA...TTTGGCTTTGATTCTCTGAGACTCTCTTCCAGCTAACAACGATAATGAGGAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CAA 90 bp TCATTTGCTGGCCATCAGAAGAATATATACATGGAGCGTGTTTGGGGAGGAGATGCTGATTCTACTTCCTaGGACTTTATAATCTCTACT +
Preference number: 5 (lower is better)
Translates to: SFAGHQKNIYMERVWGGDADSTS*DFIIST
Trigger: AGTAGAGATTATAAAGTCCAAGGAAGTAGAATCAGC...ATCTCCTCCCCAAACACGCTCCATGTATATATTCTTCTGATGGCCAGCAAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395961.7
CDS-3UTR CAA 90 bp GAATTCTTTTATGGTTACCAGTCAAAAAGTCACCGTCAGCTGGAACTGGAAGGGGCTGATTCTACTTCCTaGGACTTTATAATCTCTACT +
Preference number: 5 (lower is better)
Translates to: EFFYGYQSKSHRQLELEGADSTS*DFIIST
Trigger: AGTAGAGATTATAAAGTCCAAGGAAGTAGAATCAGC...CCCTTCCAGTTCCAGCTGACGGTGACTTTTTGACTGGTAACCATAAAAGAATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CAA 90 bp CTTACAAGGACCCTATTTGAAAAACAACGCTTATTCATTCCTTTTTCTATACCCGCAGCATCTCCTTCGTaGAGGTCCACTGTTTGTAAG +
Preference number: 5 (lower is better)
Translates to: LTRTLFEKQRLFIPFSIPAASPS*RSTVCK
Trigger: CTTACAAACAGTGGACCTCAACGAAGGAGATGCTGC...GGGTATAGAAAAAGGAATGAATAAGCGTTGTTTTTCAAATAGGGTCCTTGTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000395961.7
CDS-3UTR CAA 90 bp TCTCCCACAGACATGAAAGCAAGCTTTTATGTACTTAGGTTGGATTTCAACCTTCTTACTTCTGTGAAATaGTGGACTGCAACTTCTGCC +
Preference number: 5 (lower is better)
Translates to: SPTDMKASFYVLRLDFNLLTSVK*WTATSA
Trigger: GGCAGAAGTTGCAGTCCACAATTTCACAGAAGTAAG...AAGGTTGAAATCCAACCTAAGTACATAAAAGCTTGCTTTCATGTCTGTGGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CAA 90 bp TCTCCCACAGACATGAAAGCAAGCTTTTATGTACTTAGGTTGGATTTCAACCTTATTATTAGCCCATTGTaGAGGGAGGACACTCAGAGT +
Preference number: 5 (lower is better)
Translates to: SPTDMKASFYVLRLDFNLIISPL*REDTQS
Trigger: ACTCTGAGTGTCCTCCCTCAACAATGGGCTAATAAT...AAGGTTGAAATCCAACCTAAGTACATAAAAGCTTGCTTTCATGTCTGTGGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CAA 90 bp GAATTCTTTTATGGTTACCAGTCAAAAAGTCACCGTCAGCTGGAACTGGAAGGGTTTTATGTACTTAGGTaGGATTTCAACCTTGGCTCT +
Preference number: 5 (lower is better)
Translates to: EFFYGYQSKSHRQLELEGFYVLR*DFNLGS
Trigger: AGAGCCAAGGTTGAAATCCAACCTAAGTACATAAAA...CCCTTCCAGTTCCAGCTGACGGTGACTTTTTGACTGGTAACCATAAAAGAATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CAA 90 bp TCTCCCACAGACATGAAAGCAAGCTTTTATGTACTTAGGTTGGATTTCAACCTTGTGCTTCTGGACTGTTaGCAAACAGACAAGAACAAT +
Preference number: 5 (lower is better)
Translates to: SPTDMKASFYVLRLDFNLVLLDC*QTDKNN
Trigger: ATTGTTCTTGTCTGTTTGCAAACAGTCCAGAAGCAC...AAGGTTGAAATCCAACCTAAGTACATAAAAGCTTGCTTTCATGTCTGTGGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CAA 90 bp TCTCCCACAGACATGAAAGCAAGCTTTTATGTACTTAGGTTGGATTTCAACCTTCCCTATAATCTTACATaGCTGCAAAGCACATTCCCT +
Preference number: 5 (lower is better)
Translates to: SPTDMKASFYVLRLDFNLPYNLT*LQSTFP
Trigger: AGGGAATGTGCTTTGCAGCAATGTAAGATTATAGGG...AAGGTTGAAATCCAACCTAAGTACATAAAAGCTTGCTTTCATGTCTGTGGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CAA 90 bp ATTTCCTCATTATCGTTGTTAGCTGGAAGAGAGTCTCAGAGAATCAAAGCCAAAAGAGTGAACAAAATCTaGACCACGGAGAAGCCTAAT +
Preference number: 5 (lower is better)
Translates to: ISSLSLLAGRESQRIKAKRVNKI*TTEKPN
Trigger: ATTAGGCTTCTCCGTGGTCAAGATTTTGTTCACTCT...TTTGGCTTTGATTCTCTGAGACTCTCTTCCAGCTAACAACGATAATGAGGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS-3UTR CAA 90 bp CTTACAAGGACCCTATTTGAAAAACAACGCTTATTCATTCCTTTTTCTATACCCACCTTTTCCTGTCCCTaGTCCAGCTTGAAGAATTTG +
Preference number: 5 (lower is better)
Translates to: LTRTLFEKQRLFIPFSIPTFSCP*SSLKNL
Trigger: CAAATTCTTCAAGCTGGACAAGGGACAGGAAAAGGT...GGGTATAGAAAAAGGAATGAATAAGCGTTGTTTTTCAAATAGGGTCCTTGTAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS-3UTR CAA 90 bp TCTCCCACAGACATGAAAGCAAGCTTTTATGTACTTAGGTTGGATTTCAACCTTGTGGCCACAGGATATTaGTTTAGCAATTTATCCATT +
Preference number: 5 (lower is better)
Translates to: SPTDMKASFYVLRLDFNLVATGY*FSNLSI
Trigger: AATGGATAAATTGCTAAACAAATATCCTGTGGCCAC...AAGGTTGAAATCCAACCTAAGTACATAAAAGCTTGCTTTCATGTCTGTGGGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS CCA 72 bp CTCCCCCTGTCTCAGGTGGGAGAAGCGTGGGATCCCTaGCGGCAGAGAGGACCTTGTCTTGGGCCGGGGCGT +
Preference number: 6 (lower is better)
Translates to: LPLSQVGEAWDP*RQRGPCLGPGR
Trigger: ACGCCCCGGCCCAAGACAAGGTCCTCTCTGCCGCCAGGGATCCCACGCTTCTCCCACCTGAGACAGGGGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000448484.5
CDS CCA 72 bp AGGGTCCTGGGTCTCCAGTGCGTGCTGCCCAGTGCCTaGCTGTCGGTGGAGCCTGGCTCCCTGCACTTTGCT +
Preference number: 6 (lower is better)
Translates to: RVLGLQCVLPSA*LSVEPGSLHFA
Trigger: AGCAAAGTGCAGGGAGCCAGGCTCCACCGACAGCCAGGCACTGGGCAGCACGCACTGGAGACCCAGGACCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395961.7
CDS GCA 72 bp TATCTTCAGTCCCCTCGTGTCACCCGGAGCTGCTCCTaGACAGGGTCCTGGGTCTCCAGTGCGTGCTGCCCA +
Preference number: 6 (lower is better)
Translates to: YLQSPRVTRSCS*TGSWVSSACCP
Trigger: TGGGCAGCACGCACTGGAGACCCAGGACCCTGTGCAGGAGCAGCTCCGGGTGACACGAGGGGACTGAAGATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS GCA 72 bp TGGGAGTATCTTCAGTCCCCTCGTGTCACCCGGAGCTaGTCCTGCACAGGGTCCTGGGTCTCCAGTGCGTGC +
Preference number: 6 (lower is better)
Translates to: WEYLQSPRVTRS*SCTGSWVSSAC
Trigger: GCACGCACTGGAGACCCAGGACCCTGTGCAGGAGCAGCTCCGGGTGACACGAGGGGACTGAAGATACTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS GCA 72 bp TCCCCATTCTGCAGTGAGTTCGTGTCCACCGTGGCCTaGTCTGTGCACTGGGCTGGTTCTTTGGCTTCCTGC +
Preference number: 6 (lower is better)
Translates to: SPFCSEFVSTVA*SVHWAGSLASC
Trigger: GCAGGAAGCCAAAGAACCAGCCCAGTGCACAGAGCAGGCCACGGTGGACACGAACTCACTGCAGAATGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
ENST00000448484.5
CDS GCA 72 bp CCAGAGGCAGAGAGGTGGGTCCTGATTTCTCCTTGGTaGCTTCCTTCGCAGGTTCAGGGGTTGTCACGGACT +
Preference number: 6 (lower is better)
Translates to: PEAERWVLISPW*LPSQVQGLSRT
Trigger: AGTCCGTGACAACCCCTGAACCTGCGAAGGAAGGCACCAAGGAGAAATCAGGACCCACCTCTCTGCCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
ENST00000448484.5
CDS CCA 72 bp CTCATTTGGTTACCCATTGCTCCTGCTGAGCCCCTGTaGGAGTATCTTCAGTCCCCTCGTGTCACCCGGAGC +
Preference number: 6 (lower is better)
Translates to: LIWLPIAPAEPL*EYLQSPRVTRS
Trigger: GCTCCGGGTGACACGAGGGGACTGAAGATACTCCCACAGGGGCTCAGCAGGAGCAATGGGTAACCAAATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS CCA 72 bp GCTTGTCCCCATTCTGCAGTGAGTTCGTGTCCACCGTaGCCTGCTCTGTGCACTGGGCTGGTTCTTTGGCTT +
Preference number: 6 (lower is better)
Translates to: ACPHSAVSSCPP*PALCTGLVLWL
Trigger: AAGCCAAAGAACCAGCCCAGTGCACAGAGCAGGCCACGGTGGACACGAACTCACTGCAGAATGGGGACAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
ENST00000448484.5
CDS CAA 72 bp GTCACGGACTGTGTGTGCCCCGATGGGTTGCATCCTTaGGAATTCTTGCCAGCCCCTTGGGTCTCCTGGGAT +
Preference number: 6 (lower is better)
Translates to: VTDCVCPDGLHP*EFLPAPWVSWD
Trigger: ATCCCAGGAGACCCAAGGGGCTGGCAAGAATTCCAAAGGATGCAACCCATCGGGGCACACACAGTCCGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
ENST00000448484.5
CDS CAA 72 bp TTGCCCAGAGGCAGAGAGGTGGGTCCTGATTTCTCCTaGGTGCCTTCCTTCGCAGGTTCAGGGGTTGTCACG +
Preference number: 6 (lower is better)
Translates to: LPRGREVGPDFS*VPSFAGSGVVT
Trigger: CGTGACAACCCCTGAACCTGCGAAGGAAGGCACCAAGGAGAAATCAGGACCCACCTCTCTGCCTCTGGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
ENST00000448484.5
CDS TCA 72 bp CTCAGGTCTCTTTTGGAGCTTGTCCCCATTCTGCAGTaGGTTCGTGTCCACCGTGGCCTGCTCTGTGCACTG +
Preference number: 6 (lower is better)
Translates to: LRSLLELVPILQ*VRVHRGLLCAL
Trigger: CAGTGCACAGAGCAGGCCACGGTGGACACGAACTCACTGCAGAATGGGGACAAGCTCCAAAAGAGACCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
ENST00000448484.5
CDS CCA 72 bp TCAAGCTTCACTGATCCAAGGGATGAATCTGCGGCTTaGTCTCCGGTACGTCCTGGTACAGGCCGAGAGAGC +
Preference number: 6 (lower is better)
Translates to: SSFTDPRDESAA*SPVRPGTGRES
Trigger: GCTCTCTCGGCCTGTACCAGGACGTACCGGAGACCAAGCCGCAGATTCATCCCTTGGATCAGTGAAGCTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS CCA 72 bp CGGTCCAGCTGCCACCGGAAGTGTCCAGCTCTCACTTaGGTCTTTGTTCGCTGGAGCTTTATTGGAGCTGAC +
Preference number: 6 (lower is better)
Translates to: RSSCHRKCPALT*VFVRWSFIGAD
Trigger: GTCAGCTCCAATAAAGCTCCAGCGAACAAAGACCCAAGTGAGAGCTGGACACTTCCGGTGGCAGCTGGACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS CAA 72 bp ATTTCTCCTTGGTGCCTTCCTTCGCAGGTTCAGGGGTaGTCACGGACTGTGTGTGCCCCGATGGGTTGCATC +
Preference number: 6 (lower is better)
Translates to: ISPWCLPSQVQG*SRTVCAPMGCI
Trigger: GATGCAACCCATCGGGGCACACACAGTCCGTGACAACCCCTGAACCTGCGAAGGAAGGCACCAAGGAGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
ENST00000448484.5
CDS CAA 90 bp GCAGCTGGTGCCTCGGGTTTGGCCTCTTTCCCAAGATTCTTTCCGTaGGCATCCGCAACAGCACTTATCTCCGTTGTCTCGGGGGAAGAA +
Preference number: 6 (lower is better)
Translates to: AAGASGLASFPRFFP*ASATALISVVSGEE
Trigger: TTCTTCCCCCGAGACAACGGAGATAAGTGCTGTTGCGGATGCCAACGGAAAGAATCTTGGGAAAGAGGCCAAACCCGAGGCACCAGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS CAA 90 bp TGGGTCCTGATTTCTCCTTGGTGCCTTCCTTCGCAGGTTCAGGGGTaGTCACGGACTGTGTGTGCCCCGATGGGTTGCATCCTTTGGAAT +
Preference number: 6 (lower is better)
Translates to: WVLISPWCLPSQVQG*SRTVCAPMGCILWN
Trigger: ATTCCAAAGGATGCAACCCATCGGGGCACACACAGTCCGTGACAACCCCTGAACCTGCGAAGGAAGGCACCAAGGAGAAATCAGGACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
ENST00000448484.5
CDS CAA 90 bp CAAAACAGTTTGCCCAGAGGCAGAGAGGTGGGTCCTGATTTCTCCTaGGTGCCTTCCTTCGCAGGTTCAGGGGTTGTCACGGACTGTGTG +
Preference number: 6 (lower is better)
Translates to: QNSLPRGREVGPDFS*VPSFAGSGVVTDCV
Trigger: CACACAGTCCGTGACAACCCCTGAACCTGCGAAGGAAGGCACCAAGGAGAAATCAGGACCCACCTCTCTGCCTCTGGGCAAACTGTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
ENST00000448484.5
CDS CAA 90 bp ACCGTGGCCTGCTCTGTGCACTGGGCTGGTTCTTTGGCTTCCTGCTaGTTGCTCTTCTGCTTGTTCATCTCGGCTGCTGACTTCTTGTCC +
Preference number: 6 (lower is better)
Translates to: TVACSVHWAGSLASC*LLFCLFISAADFLS
Trigger: GGACAAGAAGTCAGCAGCCGAGATGAACAAGCAGAAGAGCAACAAGCAGGAAGCCAAAGAACCAGCCCAGTGCACAGAGCAGGCCACGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
ENST00000448484.5
CDS GCA 72 bp TCCTTCGCAGGTTCAGGGGTTGTCACGGACTGTGTGTaGCCCGATGGGTTGCATCCTTTGGAATTCTTGCCA +
Preference number: 6 (lower is better)
Translates to: SFAGSGVVTDCV*PDGLHPLEFLP
Trigger: TGGCAAGAATTCCAAAGGATGCAACCCATCGGGGCACACACAGTCCGTGACAACCCCTGAACCTGCGAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
ENST00000448484.5
CDS GCA 72 bp CTTGTCCTTCGAGGAGCCCTCTTTACCCTTCTGTGGTaGTCCTGTTGGTTCAGGCTCTGGCGGTGTGATAGT +
Preference number: 6 (lower is better)
Translates to: LVLRGALFTLLW*SCWFRLWRCDS
Trigger: ACTATCACACCGCCAGAGCCTGAACCAACAGGAGCACCACAGAAGGGTAAAGAGGGCTCCTCGAAGGACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
ENST00000448484.5
CDS GCA 72 bp TTTGGTCCCAGGCCTTTAAAGAAGCCCCCAAGGGACTaGTGCCGCTTCTCAGGTCTCTTTTGGAGCTTGTCC +
Preference number: 6 (lower is better)
Translates to: FGPRPLKKPPRD*CRFSGLFWSLS
Trigger: GGACAAGCTCCAAAAGAGACCTGAGAAGCGGCAGCAGTCCCTTGGGGGCTTCTTTAAAGGCCTGGGACCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
ENST00000448484.5
CDS CCA 72 bp CTTCTTGTCCTTCGAGGAGCCCTCTTTACCCTTCTGTaGTGCTCCTGTTGGTTCAGGCTCTGGCGGTGTGAT +
Preference number: 6 (lower is better)
Translates to: LLVLRGALFTLL*CSCWFRLWRCD
Trigger: ATCACACCGCCAGAGCCTGAACCAACAGGAGCACCACAGAAGGGTAAAGAGGGCTCCTCGAAGGACAAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
ENST00000448484.5
CDS CAA 90 bp CCCGGTCCAGCTGCCACCGGAAGTGTCCAGCTCTCACTTGGGTCTTaGTTCGCTGGAGCTTTATTGGAGCTGACATCAAGCTTCACTGAT +
Preference number: 6 (lower is better)
Translates to: PGPAATGSVQLSLGS*FAGALLELTSSFTD
Trigger: ATCAGTGAAGCTTGATGTCAGCTCCAATAAAGCTCCAGCGAACAAAGACCCAAGTGAGAGCTGGACACTTCCGGTGGCAGCTGGACCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS CAA 90 bp GTCACGGACTGTGTGTGCCCCGATGGGTTGCATCCTTTGGAATTCTaGCCAGCCCCTTGGGTCTCCTGGGATGTAAAGTTGGCTTTGTCT +
Preference number: 6 (lower is better)
Translates to: VTDCVCPDGLHPLEF*PAPWVSWDVKLALS
Trigger: AGACAAAGCCAACTTTACATCCCAGGAGACCCAAGGGGCTGGCAAGAATTCCAAAGGATGCAACCCATCGGGGCACACACAGTCCGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
ENST00000448484.5
CDS CCA 72 bp CCTCGGGTTTGGCCTCTTTCCCAAGATTCTTTCCGTTaGCATCCGCAACAGCACTTATCTCCGTTGTCTCGG +
Preference number: 6 (lower is better)
Translates to: PRVWPLSQDSFR*HPQQHLSPLSR
Trigger: CCGAGACAACGGAGATAAGTGCTGTTGCGGATGCCAACGGAAAGAATCTTGGGAAAGAGGCCAAACCCGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS CCA 72 bp ATGCTCTGCCCTCTTGGCTTCCTGTTGGCTGTCACCTaGCACCTTTTCCTGTCCCTTGTCCAGCTTGAAGAA +
Preference number: 6 (lower is better)
Translates to: MLCPLGFLLAVT*HLFLSLVQLEE
Trigger: TTCTTCAAGCTGGACAAGGGACAGGAAAAGGTGCCAGGTGACAGCCAACAGGAAGCCAAGAGGGCAGAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000448484.5
CDS CCA 72 bp CGAGGAGCCCTCTTTACCCTTCTGTGGTGCTCCTGTTaGTTCAGGCTCTGGCGGTGTGATAGTCTTTTCTGT +
Preference number: 6 (lower is better)
Translates to: RGALFTLLWCSC*FRLWRCDSLFC
Trigger: ACAGAAAAGACTATCACACCGCCAGAGCCTGAACCAACAGGAGCACCACAGAAGGGTAAAGAGGGCTCCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
ENST00000448484.5
CDS CAA 72 bp GCCTCGGGTTTGGCCTCTTTCCCAAGATTCTTTCCGTaGGCATCCGCAACAGCACTTATCTCCGTTGTCTCG +
Preference number: 6 (lower is better)
Translates to: ASGLASFPRFFP*ASATALISVVS
Trigger: CGAGACAACGGAGATAAGTGCTGTTGCGGATGCCAACGGAAAGAATCTTGGGAAAGAGGCCAAACCCGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS CAA 72 bp GCTGCCACCGGAAGTGTCCAGCTCTCACTTGGGTCTTaGTTCGCTGGAGCTTTATTGGAGCTGACATCAAGC +
Preference number: 6 (lower is better)
Translates to: AATGSVQLSLGS*FAGALLELTSS
Trigger: GCTTGATGTCAGCTCCAATAAAGCTCCAGCGAACAAAGACCCAAGTGAGAGCTGGACACTTCCGGTGGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS CAA 72 bp CCAGCCCCTTGGGTCTCCTGGGATGTAAAGTTGGCTTaGTCTGACTTAAGGTCAGCTGAAGTGGTGGGTGAC +
Preference number: 6 (lower is better)
Translates to: PAPWVSWDVKLA*SDLRSAEVVGD
Trigger: GTCACCCACCACTTCAGCTGACCTTAAGTCAGACAAAGCCAACTTTACATCCCAGGAGACCCAAGGGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
ENST00000448484.5
CDS CAA 72 bp TGTGTGTGCCCCGATGGGTTGCATCCTTTGGAATTCTaGCCAGCCCCTTGGGTCTCCTGGGATGTAAAGTTG +
Preference number: 6 (lower is better)
Translates to: CVCPDGLHPLEF*PAPWVSWDVKL
Trigger: CAACTTTACATCCCAGGAGACCCAAGGGGCTGGCAAGAATTCCAAAGGATGCAACCCATCGGGGCACACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
ENST00000448484.5
CDS CAA 90 bp TCCTTCTGGGTCCCCAGGGACAGAGCAATCCGCAGTTCCAAGTTCTaGTCCTTCTTTTTCCTTGCCGTCAACTATGTCCTTCCCTGCAGG +
Preference number: 6 (lower is better)
Translates to: SFWVPRDRAIRSSKF*SFFFLAVNYVLPCR
Trigger: CCTGCAGGGAAGGACATAGTTGACGGCAAGGAAAAAGAAGGACAAGAACTTGGAACTGCGGATTGCTCTGTCCCTGGGGACCCAGAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000448484.5
CDS TCA 72 bp TTGACACTTATTCCCAAGTCGACTTCCTCTAAGTGCTaGACTGTGTGGGTCGACACCACCACTGGAACCCCG +
Preference number: 6 (lower is better)
Translates to: LTLIPKSTSSKC*TVWVDTTTGTP
Trigger: CGGGGTTCCAGTGGTGGTGTCGACCCACACAGTTCAGCACTTAGAGGAAGTCGACTTGGGAATAAGTGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS TCA 72 bp CCAACTGGTCCGATGGATACTGGGTCTGTTTGCACTTaGGCATCCAACATCCGCTTTGGTCCCAGGCCTTTA +
Preference number: 6 (lower is better)
Translates to: PTGPMDTGSVCT*ASNIRFGPRPL
Trigger: TAAAGGCCTGGGACCAAAGCGGATGTTGGATGCTCAAGTGCAAACAGACCCAGTATCCATCGGACCAGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
ENST00000448484.5
CDS GCA 72 bp TTTCTAAAGGCGAGTCCTAGCCTGGGGCTATCCAGGTaGTTTTTCTTGGTGCCTCTAGCCTGGATCTCGGAT +
Preference number: 6 (lower is better)
Translates to: FLKASPSLGLSR*FFLVPLAWISD
Trigger: ATCCGAGATCCAGGCTAGAGGCACCAAGAAAAAGCACCTGGATAGCCCCAGGCTAGGACTCGCCTTTAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS CAA 72 bp GGATTTGCCAACTGGTCCGATGGATACTGGGTCTGTTaGCACTTGAGCATCCAACATCCGCTTTGGTCCCAG +
Preference number: 6 (lower is better)
Translates to: GFANWSDGYWVC*HLSIQHPLWSQ
Trigger: CTGGGACCAAAGCGGATGTTGGATGCTCAAGTGCAAACAGACCCAGTATCCATCGGACCAGTTGGCAAATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
ENST00000448484.5
CDS CAA 72 bp GCCTCTAGCCTGGATCTCGGATGTCTTCTGACCAGCTaGTCCATCACAGACACTTTCTGCTTTCGATGCCGT +
Preference number: 6 (lower is better)
Translates to: ASSLDLGCLLTS*SITDTFCFRCR
Trigger: ACGGCATCGAAAGCAGAAAGTGTCTGTGATGGACAAGCTGGTCAGAAGACATCCGAGATCCAGGCTAGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS CAA 90 bp TCCTGCTTGTTGCTCTTCTGCTTGTTCATCTCGGCTGCTGACTTCTaGTCCTTCGAGGAGCCCTCTTTACCCTTCTGTGGTGCTCCTGTT +
Preference number: 6 (lower is better)
Translates to: SCLLLFCLFISAADF*SFEEPSLPFCGAPV
Trigger: AACAGGAGCACCACAGAAGGGTAAAGAGGGCTCCTCGAAGGACAAGAAGTCAGCAGCCGAGATGAACAAGCAGAAGAGCAACAAGCAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
ENST00000448484.5
CDS CAA 90 bp CTTGGATTTGCCAACTGGTCCGATGGATACTGGGTCTGTTTGCACTaGAGCATCCAACATCCGCTTTGGTCCCAGGCCTTTAAAGAAGCC +
Preference number: 6 (lower is better)
Translates to: LGFANWSDGYWVCLH*SIQHPLWSQAFKEA
Trigger: GGCTTCTTTAAAGGCCTGGGACCAAAGCGGATGTTGGATGCTCAAGTGCAAACAGACCCAGTATCCATCGGACCAGTTGGCAAATCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
ENST00000448484.5
CDS CAA 90 bp GAACACATCTTGGTGGCAGGAGAACCTGGTGGGAACCGTGCTGATTaGTTTACTTGGATTTGCCAACTGGTCCGATGGATACTGGGTCTG +
Preference number: 6 (lower is better)
Translates to: EHILVAGEPGGNRAD*FTWICQLVRWILGL
Trigger: CAGACCCAGTATCCATCGGACCAGTTGGCAAATCCAAGTAAACAAATCAGCACGGTTCCCACCAGGTTCTCCTGCCACCAAGATGTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS TCA 72 bp CTGCTTGTTGCTCTTCTGCTTGTTCATCTCGGCTGCTaGCTTCTTGTCCTTCGAGGAGCCCTCTTTACCCTT +
Preference number: 6 (lower is better)
Translates to: LLVALLLVHLGC*LLVLRGALFTL
Trigger: AAGGGTAAAGAGGGCTCCTCGAAGGACAAGAAGTCAGCAGCCGAGATGAACAAGCAGAAGAGCAACAAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
ENST00000448484.5
CDS TCA 72 bp CATCTTGGTGGCAGGAGAACCTGGTGGGAACCGTGCTaGTTTGTTTACTTGGATTTGCCAACTGGTCCGATG +
Preference number: 6 (lower is better)
Translates to: HLGGRRTWWEPC*FVYLDLPTGPM
Trigger: CATCGGACCAGTTGGCAAATCCAAGTAAACAAATCAGCACGGTTCCCACCAGGTTCTCCTGCCACCAAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS CCA 72 bp TTCTCTTGGTCTTCAACTCTTTGGGGAACACTCATTTaGTTACCCATTGCTCCTGCTGAGCCCCTGTGGGAG +
Preference number: 6 (lower is better)
Translates to: FSWSSTLWGTLI*LPIAPAEPLWE
Trigger: CTCCCACAGGGGCTCAGCAGGAGCAATGGGTAACCAAATGAGTGTTCCCCAAAGAGTTGAAGACCAAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS CCA 72 bp GATGGGTTGCATCCTTTGGAATTCTTGCCAGCCCCTTaGGTCTCCTGGGATGTAAAGTTGGCTTTGTCTGAC +
Preference number: 6 (lower is better)
Translates to: DGLHPLEFLPAP*VSWDVKLALSD
Trigger: GTCAGACAAAGCCAACTTTACATCCCAGGAGACCCAAGGGGCTGGCAAGAATTCCAAAGGATGCAACCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
ENST00000448484.5
CDS CAA 72 bp TTCTTGCCAGCCCCTTGGGTCTCCTGGGATGTAAAGTaGGCTTTGTCTGACTTAAGGTCAGCTGAAGTGGTG +
Preference number: 6 (lower is better)
Translates to: FLPAPWVSWDVK*ALSDLRSAEVV
Trigger: CACCACTTCAGCTGACCTTAAGTCAGACAAAGCCAACTTTACATCCCAGGAGACCCAAGGGGCTGGCAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
ENST00000448484.5
CDS CAA 72 bp TTGCTCTTCTGCTTGTTCATCTCGGCTGCTGACTTCTaGTCCTTCGAGGAGCCCTCTTTACCCTTCTGTGGT +
Preference number: 6 (lower is better)
Translates to: LLFCLFISAADF*SFEEPSLPFCG
Trigger: ACCACAGAAGGGTAAAGAGGGCTCCTCGAAGGACAAGAAGTCAGCAGCCGAGATGAACAAGCAGAAGAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
ENST00000448484.5
CDS CAA 90 bp GGAAGTGTCCAGCTCTCACTTGGGTCTTTGTTCGCTGGAGCTTTATaGGAGCTGACATCAAGCTTCACTGATCCAAGGGATGAATCTGCG +
Preference number: 6 (lower is better)
Translates to: GSVQLSLGSLFAGAL*ELTSSFTDPRDESA
Trigger: CGCAGATTCATCCCTTGGATCAGTGAAGCTTGATGTCAGCTCCAATAAAGCTCCAGCGAACAAAGACCCAAGTGAGAGCTGGACACTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS CAA 90 bp GAATTCTTGCCAGCCCCTTGGGTCTCCTGGGATGTAAAGTTGGCTTaGTCTGACTTAAGGTCAGCTGAAGTGGTGGGTGACTTTTCAGCA +
Preference number: 6 (lower is better)
Translates to: EFLPAPWVSWDVKLA*SDLRSAEVVGDFSA
Trigger: TGCTGAAAAGTCACCCACCACTTCAGCTGACCTTAAGTCAGACAAAGCCAACTTTACATCCCAGGAGACCCAAGGGGCTGGCAAGAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
ENST00000448484.5
CDS CAA 90 bp CCTTTGGAATTCTTGCCAGCCCCTTGGGTCTCCTGGGATGTAAAGTaGGCTTTGTCTGACTTAAGGTCAGCTGAAGTGGTGGGTGACTTT +
Preference number: 6 (lower is better)
Translates to: PLEFLPAPWVSWDVK*ALSDLRSAEVVGDF
Trigger: AAAGTCACCCACCACTTCAGCTGACCTTAAGTCAGACAAAGCCAACTTTACATCCCAGGAGACCCAAGGGGCTGGCAAGAATTCCAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
ENST00000448484.5
CDS TCA 72 bp TCGCTTCTGTGGGTTCAGGTGCAGCATCTCCTTCGTTaGGGTCCACTGTTTGTAAGGCTGATTCTACTTCCT +
Preference number: 6 (lower is better)
Translates to: SLLWVQVQHLLR*GPLFVRLILLP
Trigger: AGGAAGTAGAATCAGCCTTACAAACAGTGGACCTCAACGAAGGAGATGCTGCACCTGAACCCACAGAAGCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395961.7
ENST00000448484.5
CDS TCA 72 bp TTCTTGGTGCCTCTAGCCTGGATCTCGGATGTCTTCTaGCCAGCTTGTCCATCACAGACACTTTCTGCTTTC +
Preference number: 6 (lower is better)
Translates to: FLVPLAWISDVF*PACPSQTLSAF
Trigger: GAAAGCAGAAAGTGTCTGTGATGGACAAGCTGGTCAGAAGACATCCGAGATCCAGGCTAGAGGCACCAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS GCA 72 bp CCTGGTGGGAACCGTGCTGATTTGTTTACTTGGATTTaGCAACTGGTCCGATGGATACTGGGTCTGTTTGCA +
Preference number: 6 (lower is better)
Translates to: PGGNRADLFTWI*QLVRWILGLFA
Trigger: TGCAAACAGACCCAGTATCCATCGGACCAGTTGGCAAATCCAAGTAAACAAATCAGCACGGTTCCCACCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS CCA 72 bp GAAGACACACTTCCCTGTGTACTTGGATTTGCCAACTaGTCCGATGGATACTGGGTCTGTTTGCACTTGAGC +
Preference number: 6 (lower is better)
Translates to: EDTLPCVLGFAN*SDGYWVCLHLS
Trigger: GCTCAAGTGCAAACAGACCCAGTATCCATCGGACCAGTTGGCAAATCCAAGTACACAGGGAAGTGTGTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS CAA 72 bp GTTGTCTCGGGGGAAGAAGTGGCCACATTATCCGTCTaGACACTTATTCCCAAGTCGACTTCCTCTAAGTGC +
Preference number: 6 (lower is better)
Translates to: VVSGEEVATLSV*TLIPKSTSSKC
Trigger: GCACTTAGAGGAAGTCGACTTGGGAATAAGTGTCAAGACGGATAATGTGGCCACTTCTTCCCCCGAGACAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS CAA 72 bp GTCCCCAGGGACAGAGCAATCCGCAGTTCCAAGTTCTaGTCCTTCTTTTTCCTTGCCGTCAACTATGTCCTT +
Preference number: 6 (lower is better)
Translates to: VPRDRAIRSSKF*SFFFLAVNYVL
Trigger: AAGGACATAGTTGACGGCAAGGAAAAAGAAGGACAAGAACTTGGAACTGCGGATTGCTCTGTCCCTGGGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000448484.5
CDS CAA 72 bp TTGGTGGCAGGAGAACCTGGTGGGAACCGTGCTGATTaGTTTACTTGGATTTGCCAACTGGTCCGATGGATA +
Preference number: 6 (lower is better)
Translates to: LVAGEPGGNRAD*FTWICQLVRWI
Trigger: TATCCATCGGACCAGTTGGCAAATCCAAGTAAACAAATCAGCACGGTTCCCACCAGGTTCTCCTGCCACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS CAA 90 bp TGTGTACTTGGATTTGCCAACTGGTCCGATGGATACTGGGTCTGTTaGCACTTGAGCATCCAACATCCGCTTTGGTCCCAGGCCTTTAAA +
Preference number: 6 (lower is better)
Translates to: CVLGFANWSDGYWVC*HLSIQHPLWSQAFK
Trigger: TTTAAAGGCCTGGGACCAAAGCGGATGTTGGATGCTCAAGTGCAAACAGACCCAGTATCCATCGGACCAGTTGGCAAATCCAAGTACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS TCA 72 bp TTGTCTCGGGGGAAGAAGTGGCCACATTATCCGTCTTaGCACTTATTCCCAAGTCGACTTCCTCTAAGTGCT +
Preference number: 6 (lower is better)
Translates to: LSRGKKWPHYPS*HLFPSRLPLSA
Trigger: AGCACTTAGAGGAAGTCGACTTGGGAATAAGTGTCAAGACGGATAATGTGGCCACTTCTTCCCCCGAGACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS CCA 72 bp CATCCTTTGGAATTCTTGCCAGCCCCTTGGGTCTCCTaGGATGTAAAGTTGGCTTTGTCTGACTTAAGGTCA +
Preference number: 6 (lower is better)
Translates to: HPLEFLPAPWVS*DVKLALSDLRS
Trigger: TGACCTTAAGTCAGACAAAGCCAACTTTACATCCCAGGAGACCCAAGGGGCTGGCAAGAATTCCAAAGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
ENST00000448484.5
CDS CCA 72 bp GGAACCGTGCTGATTTGTTTACTTGGATTTGCCAACTaGTCCGATGGATACTGGGTCTGTTTGCACTTGAGC +
Preference number: 6 (lower is better)
Translates to: GTVLICLLGFAN*SDGYWVCLHLS
Trigger: GCTCAAGTGCAAACAGACCCAGTATCCATCGGACCAGTTGGCAAATCCAAGTAAACAAATCAGCACGGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS CCA 72 bp TGTGTACTTGGATTTGCCAACTGGTCCGATGGATACTaGGTCTGTTTGCACTTGAGCATCCAACATCCGCTT +
Preference number: 6 (lower is better)
Translates to: CVLGFANWSDGY*VCLHLSIQHPL
Trigger: AAGCGGATGTTGGATGCTCAAGTGCAAACAGACCCAGTATCCATCGGACCAGTTGGCAAATCCAAGTACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS CCA 72 bp ACTTCCCTGTGTACTTGGATTTGCCAACTGGTCCGATaGATACTGGGTCTGTTTGCACTTGAGCATCCAACA +
Preference number: 6 (lower is better)
Translates to: TSLCTWICQLVR*ILGLFALEHPT
Trigger: TGTTGGATGCTCAAGTGCAAACAGACCCAGTATCCATCGGACCAGTTGGCAAATCCAAGTACACAGGGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS CAA 72 bp CAGCTCTCACTTGGGTCTTTGTTCGCTGGAGCTTTATaGGAGCTGACATCAAGCTTCACTGATCCAAGGGAT +
Preference number: 6 (lower is better)
Translates to: QLSLGSLFAGAL*ELTSSFTDPRD
Trigger: ATCCCTTGGATCAGTGAAGCTTGATGTCAGCTCCAATAAAGCTCCAGCGAACAAAGACCCAAGTGAGAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS CAA 72 bp CAATCCGCAGTTCCAAGTTCTTGTCCTTCTTTTTCCTaGCCGTCAACTATGTCCTTCCCTGCAGGGACATCA +
Preference number: 6 (lower is better)
Translates to: QSAVPSSCPSFS*PSTMSFPAGTS
Trigger: TGATGTCCCTGCAGGGAAGGACATAGTTGACGGCAAGGAAAAAGAAGGACAAGAACTTGGAACTGCGGATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000448484.5
CDS CAA 90 bp TGTTTACTTGGATTTGCCAACTGGTCCGATGGATACTGGGTCTGTTaGCACTTGAGCATCCAACATCCGCTTTGGTCCCAGGCCTTTAAA +
Preference number: 6 (lower is better)
Translates to: CLLGFANWSDGYWVC*HLSIQHPLWSQAFK
Trigger: TTTAAAGGCCTGGGACCAAAGCGGATGTTGGATGCTCAAGTGCAAACAGACCCAGTATCCATCGGACCAGTTGGCAAATCCAAGTAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS CAA 90 bp CTGAGAAACGCCATCAGAGAGGTTCTTGGTTTGCTTTCTTCTCTTTaGAGTTTCGCTTCTGTGGGTTCAGGTGCAGCATCTCCTTCGTTG +
Preference number: 6 (lower is better)
Translates to: LRNAIREVLGLLSSL*SFASVGSGAASPSL
Trigger: CAACGAAGGAGATGCTGCACCTGAACCCACAGAAGCGAAACTCAAAAGAGAAGAAAGCAAACCAAGAACCTCTCTGATGGCGTTTCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395961.7
ENST00000448484.5
CDS CAA 90 bp CTTTTGAGTTTCGCTTCTGTGGGTTCAGGTGCAGCATCTCCTTCGTaGAGGTCCACTGTTTGTAAGGCTGATTCTACTTCCTTGGACTTT +
Preference number: 6 (lower is better)
Translates to: LLSFASVGSGAASPS*RSTVCKADSTSLDF
Trigger: AAAGTCCAAGGAAGTAGAATCAGCCTTACAAACAGTGGACCTCAACGAAGGAGATGCTGCACCTGAACCCACAGAAGCGAAACTCAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395961.7
ENST00000448484.5
CDS TCA 72 bp CACTTGGGTCTTTGTTCGCTGGAGCTTTATTGGAGCTaGCATCAAGCTTCACTGATCCAAGGGATGAATCTG +
Preference number: 6 (lower is better)
Translates to: HLGLCSLELYWS*HQASLIQGMNL
Trigger: CAGATTCATCCCTTGGATCAGTGAAGCTTGATGTCAGCTCCAATAAAGCTCCAGCGAACAAAGACCCAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS CCA 72 bp TGTTTACTTGGATTTGCCAACTGGTCCGATGGATACTaGGTCTGTTTGCACTTGAGCATCCAACATCCGCTT +
Preference number: 6 (lower is better)
Translates to: CLLGFANWSDGY*VCLHLSIQHPL
Trigger: AAGCGGATGTTGGATGCTCAAGTGCAAACAGACCCAGTATCCATCGGACCAGTTGGCAAATCCAAGTAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS CAA 72 bp CTCTGCTTCTGGTTCATTCTCTTGGTCTTCAACTCTTaGGGGAACACTCATTTGGTTACCCATTGCTCCTGC +
Preference number: 6 (lower is better)
Translates to: LCFWFILLVFNS*GNTHLVTHCSC
Trigger: GCAGGAGCAATGGGTAACCAAATGAGTGTTCCCCAAAGAGTTGAAGACCAAGAGAATGAACCAGAAGCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371435.6
ENST00000395961.7
CDS GCA 72 bp ACTCATGATGGAATTATTATTCTCTGCTATAGCTGCTaGCTGGGAATCGTCCTTTGCAGTCTCCAGTCCTTC +
Preference number: 6 (lower is better)
Translates to: THDGIIILCYSC*LGIVLCSLQSF
Trigger: GAAGGACTGGAGACTGCAAAGGACGATTCCCAGGCAGCAGCTATAGCAGAGAATAATAATTCCATCATGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000448484.5
CDS GCA 72 bp GAAACTCATGATGGAATTATTATTCTCTGCTATAGCTaGTGCCTGGGAATCGTCCTTTGCAGTCTCCAGTCC +
Preference number: 6 (lower is better)
Translates to: ETHDGIIILCYS*CLGIVLCSLQS
Trigger: GGACTGGAGACTGCAAAGGACGATTCCCAGGCAGCAGCTATAGCAGAGAATAATAATTCCATCATGAGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000448484.5
CDS CCA 72 bp GCTGATTTGTTTACTTGGATTTGCCAACTGGTCCGATaGATACTGGGTCTGTTTGCACTTGAGCATCCAACA +
Preference number: 6 (lower is better)
Translates to: ADLFTWICQLVR*ILGLFALEHPT
Trigger: TGTTGGATGCTCAAGTGCAAACAGACCCAGTATCCATCGGACCAGTTGGCAAATCCAAGTAAACAAATCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371435.6
ENST00000395961.7
ENST00000422805.1
CDS CAA 90 bp TCTCCTTCGTTGAGGTCCACTGTTTGTAAGGCTGATTCTACTTCCTaGGACTTTATAATCTCTACTGGTGACTCACACACCACATTCTCC +
Preference number: 6 (lower is better)
Translates to: SPSLRSTVCKADSTS*DFIISTGDSHTTFS
Trigger: GGAGAATGTGGTGTGTGAGTCACCAGTAGAGATTATAAAGTCCAAGGAAGTAGAATCAGCCTTACAAACAGTGGACCTCAACGAAGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395961.7
CDS CAA 90 bp TTCACTGACATTTGTCTGAGAAACGCCATCAGAGAGGTTCTTGGTTaGCTTTCTTCTCTTTTGAGTTTCGCTTCTGTGGGTTCAGGTGCA +
Preference number: 6 (lower is better)
Translates to: FTDICLRNAIREVLG*LSSLLSFASVGSGA
Trigger: TGCACCTGAACCCACAGAAGCGAAACTCAAAAGAGAAGAAAGCAAACCAAGAACCTCTCTGATGGCGTTTCTCAGACAAATGTCAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395961.7
CDS CAA 90 bp TCTGATGTCATTTGTCTGAGAAACGCCATCAGAGAGGTTCTTGGTTaGCTTTCTTCTCTTTTGAGTTTCGCTTCTGTGGGTTCAGGTGCA +
Preference number: 6 (lower is better)
Translates to: SDVICLRNAIREVLG*LSSLLSFASVGSGA
Trigger: TGCACCTGAACCCACAGAAGCGAAACTCAAAAGAGAAGAAAGCAAACCAAGAACCTCTCTGATGGCGTTTCTCAGACAAATGACATCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448484.5
CDS CAA 90 bp TCTCCTTCGTTGAGGTCCACTGTTTGTAAGGCTGATTCTACTTCCTaGGACTTTATAATCTCTACTGGTGACTCACACACCACCTTTTTC +
Preference number: 6 (lower is better)
Translates to: SPSLRSTVCKADSTS*DFIISTGDSHTTFF
Trigger: GAAAAAGGTGGTGTGTGAGTCACCAGTAGAGATTATAAAGTCCAAGGAAGTAGAATCAGCCTTACAAACAGTGGACCTCAACGAAGGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448484.5