RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BAZ2B (Homo sapiens)

Ensembl gene IDs: ENSG00000123636

Ensembl transcript IDs: ENST00000294905.4, ENST00000343439.9, ENST00000392782.5, ENST00000392783.7, ENST00000426648.1, ENST00000437839.5, ENST00000441143.1, ENST00000467184.5, ENST00000472953.1, ENST00000474437.1, ENST00000482501.5, ENST00000482503.5, ENST00000483316.1, ENST00000485917.1, ENST00000541068.6, ENST00000548440.1, ENST00000551504.5

Found 513 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCCCTTTGAAAATTCTTTaGGTGTGCTTCCCTGTTCTA +
Preference number: 2 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRPLKIL*VCFPVL
Trigger: TAGAACAGGGAAGCACACCCAAAGAATTTTCAAAGG...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
3UTR-3UTR CCA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCTACAGTTCACATTGCTaGTCTCATTTGTCCTTGTTT +
Preference number: 2 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRYSSHC*SHLSLF
Trigger: AAACAAGGACAAATGAGACCAGCAATGTGAACTGTA...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
3UTR-3UTR TCA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAACAATCCTCTAAGGCATaGACAATAATGTCTGCAAAC +
Preference number: 2 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQQSSKA*TIMSAN
Trigger: GTTTGCAGACATTATTGTTCATGCCTTAGAGGATTG...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
3UTR-3UTR GCA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCCAGACGAAAATAAAATaGTACAATCCTCTAAGGCAT +
Preference number: 2 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRQTKIK*YNPLRH
Trigger: ATGCCTTAGAGGATTGTAGCATTTTATTTTCGTCTG...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
3UTR-3UTR GCA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGAAAATTCTTTGGGTGTaGTTCCCTGTTCTACCTAAA +
Preference number: 2 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQKILWV*FPVLPK
Trigger: TTTAGGTAGAACAGGGAAGCACACCCAAAGAATTTT...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
3UTR-3UTR GCA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAACAGACGAAAATAAAATaGTACAATCCTCTAAGGCAT +
Preference number: 2 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQQTKIK*YNPLRH
Trigger: ATGCCTTAGAGGATTGTAGCATTTTATTTTCGTCTG...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
3UTR CAA 90 bp ATTGAGAGGGAAAGGAGAACCATTTCCCACATTAGAGCTCTGGTGTaGAGTATTCAGTGCGATTTGATATATTTTAATTGCTATTGCACT +
Preference number: 2 (lower is better)
Translates to: IERERRTISHIRALV*SIQCDLIYFNCYCT
Trigger: AGTGCAATAGCAATTAAAATATATCAAATCGCACTGAATACTCAACACCAGAGCTCTAATGTGGGAAATGGTTCTCCTTTCCCTCTCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
3UTR-3UTR CCA 90 bp CTGTATAGCTATCATTACCTTCAGACGAAAATAAAATGCTACAATCCTCTAAGGTACAGTTCACATTGCTaGTCTCATTTGTCCTTGTTT +
Preference number: 2 (lower is better)
Translates to: LYSYHYLQTKIKCYNPLRYSSHC*SHLSLF
Trigger: AAACAAGGACAAATGAGACCAGCAATGTGAACTGTA...CCTTAGAGGATTGTAGCATTTTATTTTCGTCTGAAGGTAATGATAGCTATACAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
3UTR-3UTR CAA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAAGGAGACGCCACAGTGTaGGTAGAGGATAATTACTGT +
Preference number: 3 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQGDATV*VEDNYC
Trigger: ACAGTAATTATCCTCTACCAACACTGTGGCGTCTCC...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
3UTR-3UTR CAA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCCATTGCTGGTCTCATTaGTCCTTGTTTAGAAGGAAA +
Preference number: 3 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRHCWSH*SLFRRK
Trigger: TTTCCTTCTAAACAAGGACAAATGAGACCAGCAATG...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
3UTR-3UTR CAA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAAATAACACCCTTTCCTTaGAAAATTCTTTGGGTGTGC +
Preference number: 3 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQITPFP*KILWVC
Trigger: GCACACCCAAAGAATTTTCAAAGGAAAGGGTGTTAT...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
3UTR-3UTR CAA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAACATTGCTGGTCTCATTaGTCCTTGTTTAGAAGGAAA +
Preference number: 3 (lower is better)
Translates to: ADKSHKPITEGLGCCRNEHCWSH*SLFRRK
Trigger: TTTCCTTCTAAACAAGGACAAATGAGACCAGCAATG...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCCAAAGACTGGGTGGCTaGCCATTGGGAAGGCACTCG +
Preference number: 4 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRQRLGG*PLGRHS
Trigger: CGAGTGCCTTCCCAATGGTCAGCCACCCAGTCTTTG...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCCCTTCCTTCTTCGCTTaGGTCCTGGAGTGGGTGTGC +
Preference number: 4 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRPSFFA*VLEWVC
Trigger: GCACACCCACTCCAGGACGCAAGCGAAGAAGGAAGG...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCGGGGGTCATAACCTCTaGCTCAGGAGGCATCTTAGC +
Preference number: 4 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRGGHNL*LRRHLS
Trigger: GCTAAGATGCCTCCTGAGTCAGAGGTTATGACCCCC...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCTGGGTGGCTGACCATTaGGAAGGCACTCGACACTGT +
Preference number: 4 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRWVADH*EGTRHC
Trigger: ACAGTGTCGAGTGCCTTCCCAATGGTCAGCCACCCA...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGGCTTGCGTCCTGGAGTaGGTGTGCCCAAGGGATGCT +
Preference number: 4 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQACVLE*VCPRDA
Trigger: AGCATCCCTTGGGCACACCCACTCCAGGACGCAAGC...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAATCTTCGCTTGCGTCCTaGAGTGGGTGTGCCCAAGGG +
Preference number: 4 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQSSLAS*SGCAQG
Trigger: CCCTTGGGCACACCCACTCCAGGACGCAAGCGAAGA...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCCCGCCTCTCTCTCTCTaGTTAGTTCCTATCCAGCAG +
Preference number: 4 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRPPLSL*LVPIQQ
Trigger: CTGCTGGATAGGAACTAATCAGAGAGAGAGAGGCGG...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCCAAGTCCTCCCTTTCTaGTGCAGGCTCTGGACACAT +
Preference number: 4 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRQVLPF*CRLWTH
Trigger: ATGTGTCCAGAGCCTGCATCAGAAAGGGAGGACTTG...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCGTGCCCAAGGGATGCTaGTCTTCTCCCAGATCAATG +
Preference number: 4 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRVPKGC*SSPRSM
Trigger: CATTGATCTGGGAGAAGAGCAGCATCCCTTGGGCAC...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGCCTTCCTTCTTCGCTTaGGTCCTGGAGTGGGTGTGC +
Preference number: 4 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQPSFFA*VLEWVC
Trigger: GCACACCCACTCCAGGACGCAAGCGAAGAAGGAAGG...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCAGACCAAAGACTGGGTaGCTGACCATTGGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRRPKTG*LTIGKA
Trigger: TGCCTTCCCAATGGTCAGCCACCCAGTCTTTGGTCT...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAAGCTTGCGTCCTGGAGTaGGTGTGCCCAAGGGATGCT +
Preference number: 4 (lower is better)
Translates to: ADKSHKPITEGLGCCRNEACVLE*VCPRDA
Trigger: AGCATCCCTTGGGCACACCCACTCCAGGACGCAAGC...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAATCTTCGCTTGCGTCCTaGAGTGGGTGTGCCCAAGGG +
Preference number: 4 (lower is better)
Translates to: ADKSHKPITEGLGCCRNESSLAS*SGCAQG
Trigger: CCCTTGGGCACACCCACTCCAGGACGCAAGCGAAGA...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAACAAAGACTGGGTGGCTaGCCATTGGGAAGGCACTCG +
Preference number: 4 (lower is better)
Translates to: ADKSHKPITEGLGCCRNEQRLGG*PLGRHS
Trigger: CGAGTGCCTTCCCAATGGTCAGCCACCCAGTCTTTG...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCGAGGTTACGAGGTGTTaGGTGACCTGTGAGACTCAT +
Preference number: 4 (lower is better)
Translates to: NIPYTLFQRQALPRLRRREVTRC*VTCETH
Trigger: ATGAGTCTCACAGGTCACTCAACACCTCGTAACCTC...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCCTTGACTATGCAGGATaGGAGAGGCAGAGGGCATTA +
Preference number: 4 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRLDYAG*ERQRAL
Trigger: TAATGCCCTCTGCCTCTCCCATCCTGCATAGTCAAG...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCAGCATTGCCAACATTTaGAGGTCGACCTTTCCGACG +
Preference number: 4 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRSIANI*RSTFPT
Trigger: CGTCGGAAAGGTCGACCTCCAAATGTTGGCAATGCT...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGAGCAGGAGCAGAGCCTaGGGCTTTTGCTATGTGGAG +
Preference number: 4 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQSRSRA*GFCYVE
Trigger: CTCCACATAGCAAAAGCCCCAGGCTCTGCTCCTGCT...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAAGCTCCTGTACGAGTATaGGCATCAGTTGTTCGCCAC +
Preference number: 4 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQAPVRV*ASVVRH
Trigger: GTGGCGAACAACTGATGCTCATACTCGTACAGGAGC...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAATGCTGTGACAAAACCTaGGGCTGCTTCTGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQCCDKT*GCFCWD
Trigger: ATCCCAGCAGAAGCAGCCTCAGGTTTTGTCACAGCA...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGCCGCCTCTCTCTCTCTaGTTAGTTCCTATCCAGCAG +
Preference number: 4 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQPPLSL*LVPIQQ
Trigger: CTGCTGGATAGGAACTAATCAGAGAGAGAGAGGCGG...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAAGGGGGTCATAACCTCTaGCTCAGGAGGCATCTTAGC +
Preference number: 4 (lower is better)
Translates to: ADKSHKPITEGLGCCRNEGGHNL*LRRHLS
Trigger: GCTAAGATGCCTCCTGAGTCAGAGGTTATGACCCCC...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAATGCGTTGCTGTTGACTaGACGCTGCCCAGTGAATGT +
Preference number: 4 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQCVAVD*TLPSEC
Trigger: ACATTCACTGGGCAGCGTTCAGTCAACAGCAACGCA...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGCGTTGCTGTTGACTaGACGCTGCCCAGTGAATGT +
Preference number: 4 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQCVAVD*TLPSEC
Trigger: ACATTCACTGGGCAGCGTTCAGTCAACAGCAACGCA...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCTTCAAAAGACACCACTaGATTCCCTGCGGTCCATCT +
Preference number: 4 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRFKRHH*IPCGPS
Trigger: AGATGGACCGCAGGGAATGCAGTGGTGTCTTTTGAA...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392783.7
CDS-3UTR GCA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCTCTACGACCTTCCATTaGCCTGATACGAGGAATGAC +
Preference number: 4 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRSTTFH*PDTRND
Trigger: GTCATTCCTCGTATCAGGGCAATGGAAGGTCGTAGA...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAAGGTGTGCCCAAGGGATaGTGCTCTTCTCCCAGATCA +
Preference number: 4 (lower is better)
Translates to: ADKSHKPITEGLGCCRNEGVPKG*CSSPRS
Trigger: TGATCTGGGAGAAGAGCAGCATCCCTTGGGCACACC...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCCAGCTCTTCAACACTTaGTGCTTGGTCACCTTCATC +
Preference number: 4 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRQLFNT*CLVTFI
Trigger: GATGAAGGTGACCAAGCAGCAAGTGTTGAAGAGCTG...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAACTACCTGTGCAGCACTaGGAGCTTCTGATAATGCCC +
Preference number: 4 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQLPVQH*ELLIMP
Trigger: GGGCATTATCAGAAGCTCGCAGTGCTGCACAGGTAG...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAATGGGTGGCTGACCATTaGGAAGGCACTCGACACTGT +
Preference number: 4 (lower is better)
Translates to: ADKSHKPITEGLGCCRNEWVADH*EGTRHC
Trigger: ACAGTGTCGAGTGCCTTCCCAATGGTCAGCCACCCA...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCCTGAATGCCCTGAGCTaGCTGAATGTAGACCAAAGA +
Preference number: 4 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRLNALS*LNVDQR
Trigger: TCTTTGGTCTACATTCAGCCAGCTCAGGGCATTCAG...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAAATCACATACAGCAGCTaGGAGGAGCCTCACAAGCAA +
Preference number: 4 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQITYSS*EEPHKQ
Trigger: TTGCTTGTGAGGCTCCTCTCAGCTGCTGTATGTGAT...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGCTGCTGGGATTGGAATaGGTGAGTCTGGGATTCAGA +
Preference number: 4 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQLLGLE*VSLGFR
Trigger: TCTGAATCCCAGACTCACTCATTCCAATCCCAGCAG...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAACTGCTGGGATTGGAATaGGTGAGTCTGGGATTCAGA +
Preference number: 4 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQLLGLE*VSLGFR
Trigger: TCTGAATCCCAGACTCACTCATTCCAATCCCAGCAG...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCTTTTGGATGTGCTGGTaGACTAGAGGTTGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRFWMCW*TRGCFW
Trigger: CCAAAAGCAACCTCTAGTTCACCAGCACATCCAAAA...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGGCTTTTTCCTTCCCTTaGCTATGCAGGATGGGAGAG +
Preference number: 4 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQAFSFP*LCRMGE
Trigger: CTCTCCCATCCTGCATAGTCAAGGGAAGGAAAAAGC...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCATGTGGTCAATCTTGTaGCATCACTGTTGGGAAACC +
Preference number: 4 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRMWSIL*HHCWET
Trigger: GGTTTCCCAACAGTGATGTCACAAGATTGACCACAT...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGGAGGTTACGAGGTGTTaGGTGACCTGTGAGACTCAT +
Preference number: 4 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQEVTRC*VTCETH
Trigger: ATGAGTCTCACAGGTCACTCAACACCTCGTAACCTC...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGGCCAGAGTGTGGGCTTaGAGTAAGTGTGGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQARVWA*SKCGRR
Trigger: TCTTCTTCCACACTTACTTCAAGCCCACACTCTGGC...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAATGCATGCCAGTTCATTaGTCAGGAAAGCCAGGACTG +
Preference number: 4 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQCMPVH*SGKPGL
Trigger: CAGTCCTGGCTTTCCTGATCAATGAACTGGCATGCA...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAACTGAACGCTGCCCAGTaGATGTTTTCCACTGTTCTG +
Preference number: 4 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQLNAAQ*MFSTVL
Trigger: CAGAACAGTGGAAAACATTCACTGGGCAGCGTTCAG...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCCACCAAAGAAGCAGTTaGCATATCGGCATGAGTAAG +
Preference number: 4 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRHQRSS*HIGMSK
Trigger: CTTACTCATGCCGATATGTCAACTGCTTCTTTGGTG...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAAAGCTGCAGGTTGAGCTaGAGTGGCCTTTTCATTCTG +
Preference number: 4 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQSCRLS*SGLFIL
Trigger: CAGAATGAAAAGGCCACTTCAGCTCAACCTGCAGCT...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTCACCACTGCATTCCCTaGGGTCCATCTCTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCHHCIP*GPSLAS
Trigger: TGAAGCCAGAGATGGACCGCAGGGAATGCAGTGGTG...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392783.7
CDS-3UTR GCA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCTCTCGAACTGAGAGTTaGGGTAGATGGGATTTTTGC +
Preference number: 4 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRSRTES*GRWDFC
Trigger: GCAAAAATCCCATCTACCGCAACTCTCAGTTCGAGA...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAAGGAAAAGATGCTAGTTaGGGATGTGCGGCTAAGGCT +
Preference number: 4 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQGKDAS*GCAAKA
Trigger: AGCCTTAGCCGCACATCCCCAACTAGCATCTTTTCC...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAACCTGCGGTCCATCTCTaGCTTCATAGAAGTCACCCA +
Preference number: 4 (lower is better)
Translates to: ADKSHKPITEGLGCCRNEPAVHL*LHRSHP
Trigger: TGGGTGACTTCTATGAAGCCAGAGATGGACCGCAGG...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392783.7
CDS-3UTR CCA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGGGGGCTTTTGCTATGTaGAGGTTACGAGGTGTTGAG +
Preference number: 4 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQGAFAM*RLRGVE
Trigger: CTCAACACCTCGTAACCTCCACATAGCAAAAGCCCC...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTAGCAGGAGCAGAGCCTaGGGCTTTTGCTATGTGGAG +
Preference number: 4 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCSRSRA*GFCYVE
Trigger: CTCCACATAGCAAAAGCCCCAGGCTCTGCTCCTGCT...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCTTACTCTTCTTCTTTTaGAAGTGCCAGAGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRLLFFF*KCQSVG
Trigger: GCCCACACTCTGGCACTTCCAAAAGAAGAAGAGTAA...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCATTTGCACCAGCATTTaGTTTGGGGGTCATAACCTC +
Preference number: 4 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRICTSI*FGGHNL
Trigger: GAGGTTATGACCCCCAAACCAAATGCTGGTGCAAAT...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAAATCACATACAGCAGCTaGGAGGAGCCTCACAAGCAA +
Preference number: 4 (lower is better)
Translates to: ADKSHKPITEGLGCCRNEITYSS*EEPHKQ
Trigger: TTGCTTGTGAGGCTCCTCTCAGCTGCTGTATGTGAT...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCTCGATTTCCTCCACCTaGGCTTGTACTTTTAGTTTG +
Preference number: 4 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRSISST*ACTFSL
Trigger: CAAACTAAAAGTACAAGCTCAGGTGGAGGAAATCGA...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAATGGGATTGGAATGAGTaGGTCTGGGATTCAGACGCA +
Preference number: 4 (lower is better)
Translates to: ADKSHKPITEGLGCCRNEWDWNE*VWDSDA
Trigger: TGCGTCTGAATCCCAGACTCACTCATTCCAATCCCA...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTTGCTGTGACAAAACCTaGGGCTGCTTCTGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCCCDKT*GCFCWD
Trigger: ATCCCAGCAGAAGCAGCCTCAGGTTTTGTCACAGCA...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAAAAATGGAAGCTGCTGTaGCAAAACCTGAGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQKWKLL*QNLRLL
Trigger: AAGCAGCCTCAGGTTTTGTCACAGCAGCTTCCATTT...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGAAATGGAAGCTGCTGTaGCAAAACCTGAGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQKWKLL*QNLRLL
Trigger: AAGCAGCCTCAGGTTTTGTCACAGCAGCTTCCATTT...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAAGCTTTTTCCTTCCCTTaGCTATGCAGGATGGGAGAG +
Preference number: 4 (lower is better)
Translates to: ADKSHKPITEGLGCCRNEAFSFP*LCRMGE
Trigger: CTCTCCCATCCTGCATAGTCAAGGGAAGGAAAAAGC...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCCCAGACTCCATATTGTaGTCAATGTGGTCAATCTTG +
Preference number: 4 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRPDSIL*SMWSIL
Trigger: CAAGATTGACCACATTGATCACAATATGGAGTCTGG...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAAGATCCCCAGCTGTTCTaGATAAATGTCCACATGGGT +
Preference number: 4 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQDPQLF*INVHMG
Trigger: ACCCATGTGGACATTTATTCAGAACAGCTGGGGATC...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGGACAGGTTAAACGGTTaGTCCCCAGCTGTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQDRLNG*SPAVLN
Trigger: ATTCAGAACAGCTGGGGATCAACCGTTTAACCTGTC...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGCAGATCAATGCCACCTaGAGTGTCTCTTTTGCCTGT +
Preference number: 4 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQQINAT*SVSFAC
Trigger: ACAGGCAAAAGAGACACTTCAGGTGGCATTGATCTG...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCAGCTTCCTTCTGTACTaGCTCTGTTGTTTACTCAGT +
Preference number: 4 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRSFLLY*LCCLLS
Trigger: ACTGAGTAAACAACAGAGTCAGTACAGAAGGAAGCT...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGATCGGCATGAGTAAGTaGAGTGTCATCACAGGGTGT +
Preference number: 4 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQIGMSK*SVITGC
Trigger: ACACCCTGTGATGACACTTCACTTACTCATGCCGAT...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAAAAGCCAACAGGATTCTaGGCAGAAGATCCAAGAGGA +
Preference number: 4 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQKPTGF*AEDPRG
Trigger: TCCTCTTGGATCTTCTGCTCAGAATCCTGTTGGCTT...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAAAGCTGCAGGTTGAGCTaGAGTGGCCTTTTCATTCTG +
Preference number: 4 (lower is better)
Translates to: ADKSHKPITEGLGCCRNESCRLS*SGLFIL
Trigger: CAGAATGAAAAGGCCACTTCAGCTCAACCTGCAGCT...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTCAAGTCCTCCCTTTCTaGTGCAGGCTCTGGACACAT +
Preference number: 4 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCQVLPF*CRLWTH
Trigger: ATGTGTCCAGAGCCTGCATCAGAAAGGGAGGACTTG...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCGATTTCTGTAATTGCTaGATGCACAGAGCTACCTGT +
Preference number: 4 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRDFCNC*MHRATC
Trigger: ACAGGTAGCTCTGTGCATTCAGCAATTACAGAAATC...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGGGCCATGCATCCTCATaGGTTTCCATTTCAGTCAGA +
Preference number: 4 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQGHASS*VSISVR
Trigger: TCTGACTGAAATGGAAACTCATGAGGATGCATGGCC...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCAAGTTTCGTAAGAACTaGACCACCATGAGACAGTCT +
Preference number: 4 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRKFRKN*TTMRQS
Trigger: AGACTGTCTCATGGTGGTGCAGTTCTTACGAAACTT...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAATGGTGGAAAGAAGGTTaGTCCTGTACGAGTATGAGC +
Preference number: 4 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQWWKEG*SCTSMS
Trigger: GCTCATACTCGTACAGGAGCAACCTTCTTTCCACCA...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGGTGAGGAAAAAGGGGTaGTACTTGCAGCAGCAATGT +
Preference number: 4 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQVRKKG*YLQQQC
Trigger: ACATTGCTGCTGCAAGTAGCACCCCTTTTTCCTCAC...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAATTACAGGTGTCTGATTaGCAGGGGTTCTTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: ADKSHKPITEGLGCCRNELQVSD*QGFFSH
Trigger: GTGGGAGAAGAACCCCTGGCAATCAGACACCTGTAA...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTAGAGCCTGGGGCTTTTaGTATGTGGAGGTTACGAGG +
Preference number: 4 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCRAWGF*YVEVTR
Trigger: CCTCGTAACCTCCACATAGCAAAAGCCCCAGGCTCT...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGCAGCTCTTCAACACTTaGTGCTTGGTCACCTTCATC +
Preference number: 4 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQQLFNT*CLVTFI
Trigger: GATGAAGGTGACCAAGCAGCAAGTGTTGAAGAGCTG...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGCTTCACCACTCTCCATaGCTTCTACAAAAATCCCCC +
Preference number: 4 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQLHHSP*LLQKSP
Trigger: GGGGGATTTTTGTAGAAGGCATGGAGAGTGGTGAAG...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAACAACGTGCACCCATTTaGACCAGCATTTGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: ADKSHKPITEGLGCCRNEQRAPI*TSIWFG
Trigger: CCCAAACCAAATGCTGGTGCAAATGGGTGCACGTTG...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCCTCCACCAACCAAACTaGATTTCTTCTGGAATAGGT +
Preference number: 4 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRLHQPN*ISSGIG
Trigger: ACCTATTCCAGAAGAAATGCAGTTTGGTTGGTGGAG...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCATCCAACCCTTCACTTaGAAACTTGCTGATGCAACT +
Preference number: 4 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRIQPFT*KLADAT
Trigger: AGTTGCATCAGCAAGTTTGCAAGTGAAGGGTTGGAT...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAAAGAGAGAACAAGTCCTaGAATACGAGGCAACTCTGG +
Preference number: 4 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQRENKS*NTRQLW
Trigger: CCAGAGTTGCCTCGTATTCCAGGACTTGTTCTCTCT...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAAGGAAAAGATGCTAGTTaGGGATGTGCGGCTAAGGCT +
Preference number: 4 (lower is better)
Translates to: ADKSHKPITEGLGCCRNEGKDAS*GCAAKA
Trigger: AGCCTTAGCCGCACATCCCCAACTAGCATCTTTTCC...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAATCCGACGTCTCATCCTaGATTCCTCTCTTGCTCGTT +
Preference number: 4 (lower is better)
Translates to: ADKSHKPITEGLGCCRNESDVSS*IPLLLV
Trigger: AACGAGCAAGAGAGGAATCCAGGATGAGACGTCGGA...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGGAGAGTTGCGGTAGATaGGATTTTTGCCTTTTCCCC +
Preference number: 4 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQESCGR*DFCLFP
Trigger: GGGGAAAAGGCAAAAATCCCATCTACCGCAACTCTC...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCAGAAAAGCAGGTGACTaGGATTCAGAACATAAGGCA +
Preference number: 4 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRRKAGD*DSEHKA
Trigger: TGCCTTATGTTCTGAATCCCAGTCACCTGCTTTTCT...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCATCACAGGGTGTTCGTaGCAAAAGACTAAACCATTG +
Preference number: 4 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRITGCS*QKTKPL
Trigger: CAATGGTTTAGTCTTTTGCCACGAACACCCTGTGAT...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAAGCCTCTAGAATTTGCTaGGCTCGAAGTTCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQASRIC*ARSSFS
Trigger: GGAAAAAGAACTTCGAGCTCAGCAAATTCTAGAGGC...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCTTGTGCTTCACTCTCTaGATCAGAATCATCATCTTC +
Preference number: 4 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRLCFTL*IRIIIF
Trigger: GAAGATGATGATTCTGATTCAGAGAGTGAAGCACAA...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCGATTCCTCCTTTGCCTaGGAGCTTTGGAAAATAAAT +
Preference number: 4 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRDSSFA*ELWKIN
Trigger: ATTTATTTTCCAAAGCTCTCAGGCAAAGGAGGAATC...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCGGTTGCTTTTGGATTTaGCAAAGCTGCAATAACCTT +
Preference number: 4 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRGCFWI*QSCNNL
Trigger: AAGGTTATTGCAGCTTTGTCAAATCCAAAAGCAACC...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTTTTGGATGTGCTGGTaGACTAGAGGTTGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQFWMCW*TRGCFW
Trigger: CCAAAAGCAACCTCTAGTTCACCAGCACATCCAAAA...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGCCTGGCTATTTCTTaGGCTTGCAGTTTTCTTAGC +
Preference number: 4 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQCLAIS*ACSFLS
Trigger: GCTAAGAAAACTGCAAGCTCAAGAAATAGCCAGGCA...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAAATGTGGTCAATCTTGTaGCATCACTGTTGGGAAACC +
Preference number: 4 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQMWSIL*HHCWET
Trigger: GGTTTCCCAACAGTGATGTCACAAGATTGACCACAT...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGAGAAGGTGTCGAAGATaGAGTTGGTGTAGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQRRCRR*SWCSRG
Trigger: TCCTCTACTACACCAACTTCATCTTCGACACCTTCT...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAAGATTGTAGAGCTAAGTaGAGCAACTCCAGTGGAAAG +
Preference number: 4 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQDCRAK*SNSSGK
Trigger: CTTTCCACTGGAGTTGCTTCACTTAGCTCTACAATC...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAAGATCCCCAGCTGTTCTaGATAAATGTCCACATGGGT +
Preference number: 4 (lower is better)
Translates to: ADKSHKPITEGLGCCRNEDPQLF*INVHMG
Trigger: ACCCATGTGGACATTTATTCAGAACAGCTGGGGATC...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAAGACAGGTTAAACGGTTaGTCCCCAGCTGTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: ADKSHKPITEGLGCCRNEDRLNG*SPAVLN
Trigger: ATTCAGAACAGCTGGGGATCAACCGTTTAACCTGTC...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTGTGTTGAGTGACCTGTaGGACTCATGGAAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCVLSDL*DSWKGF
Trigger: AAAGCCCTTCCATGAGTCTCACAGGTCACTCAACAC...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGCCTGTTTTCTTAGCATaGATGATTCTGAGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQPVFLA*MILSLR
Trigger: CCGCAAGCTCAGAATCATTCATGCTAAGAAAACAGG...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAACAGATCAATGCCACCTaGAGTGTCTCTTTTGCCTGT +
Preference number: 4 (lower is better)
Translates to: ADKSHKPITEGLGCCRNEQINAT*SVSFAC
Trigger: ACAGGCAAAAGAGACACTTCAGGTGGCATTGATCTG...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAAACTGAACGCAATGAGTaGGACGCATCAAAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: ADKSHKPITEGLGCCRNETERNE*DASKSF
Trigger: GAAGCTCTTTGATGCGTCTCACTCATTGCGTTCAGT...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTCTGAACGCTGCCCAGTaGATGTTTTCCACTGTTCTG +
Preference number: 4 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCLNAAQ*MFSTVL
Trigger: CAGAACAGTGGAAAACATTCACTGGGCAGCGTTCAG...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGGGCCATCCACAAAACTaGAGTCCCATCATAGATACT +
Preference number: 4 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQGHPQN*SPIIDT
Trigger: AGTATCTATGATGGGACTTCAGTTTTGTGGATGGCC...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAAGTGAGGAAAAAGGGGTaGTACTTGCAGCAGCAATGT +
Preference number: 4 (lower is better)
Translates to: ADKSHKPITEGLGCCRNEVRKKG*YLQQQC
Trigger: ACATTGCTGCTGCAAGTAGCACCCCTTTTTCCTCAC...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAATCTACGACCTTCCATTaGCCTGATACGAGGAATGAC +
Preference number: 4 (lower is better)
Translates to: ADKSHKPITEGLGCCRNESTTFH*PDTRND
Trigger: GTCATTCCTCGTATCAGGGCAATGGAAGGTCGTAGA...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGCTAGGAATTCAGCATTaGCAACATTTGGAGGTCGAC +
Preference number: 4 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQLGIQH*QHLEVD
Trigger: GTCGACCTCCAAATGTTGGCAATGCTGAATTCCTAG...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCCAAAAGCTTTATTTGTaGTGCTTGCCTGGCTATTTC +
Preference number: 4 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRQKLYL*CLPGYF
Trigger: GAAATAGCCAGGCAAGCAGCACAAATAAAGCTTTTG...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTCAACGTGCACCCATTTaGACCAGCATTTGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCQRAPI*TSIWFG
Trigger: CCCAAACCAAATGCTGGTGCAAATGGGTGCACGTTG...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTCTGATAAGACAACGTaGACCCATTTGCACCAGCAT +
Preference number: 4 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQSDKTT*THLHQH
Trigger: ATGCTGGTGCAAATGGGTGCACGTTGTCTTATCAGA...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAACTGTTGACTGAACGCTaGCCAGTGAATGTTTTCCAC +
Preference number: 4 (lower is better)
Translates to: ADKSHKPITEGLGCCRNELLTER*PVNVFH
Trigger: GTGGAAAACATTCACTGGGCAGCGTTCAGTCAACAG...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAACTGCCTTTTCCACATTaGTTTGCGTTGCTGTTGACT +
Preference number: 4 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQLPFPH*FALLLT
Trigger: AGTCAACAGCAACGCAAAGCAATGTGGAAAAGGCAG...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAATCTGTAATTGCTGAATaGACAGAGCTACCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQSVIAE*TELPVQ
Trigger: CTGCACAGGTAGCTCTGTGCATTCAGCAATTACAGA...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCTATTGTGGCCAGCTCTaGCTATATCAGAATCATCTT +
Preference number: 4 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRYCGQL*LYQNHL
Trigger: AAGATGATTCTGATATAGGCAGAGCTGGCCACAATA...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAATCTGGCAAAGGCTTTTaGTCTGCTAAGCACATGTCT +
Preference number: 4 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQSGKGF*SAKHMS
Trigger: AGACATGTGCTTAGCAGACCAAAAGCCTTTGCCAGA...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAAAATACGAGGCAACTCTaGCAAAGGCTTTTGGTCTGC +
Preference number: 4 (lower is better)
Translates to: ADKSHKPITEGLGCCRNENTRQL*QRLLVC
Trigger: GCAGACCAAAAGCCTTTGCCAGAGTTGCCTCGTATT...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAACCAGCCATATTCCAATaGAATACGCAGTTCACGTTC +
Preference number: 4 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQPAIFQ*NTQFTF
Trigger: GAACGTGAACTGCGTATTCCATTGGAATATGGCTGG...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAATTGTCTATCTGGATTTaGTGGTCTTCCTCTACGACC +
Preference number: 4 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQLSIWI*WSSSTT
Trigger: GGTCGTAGAGGAAGACCACCAAATCCAGATAGACAA...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAATTTGTGCTGCTTGCCTaGCTATTTCTTGAGCTTGCA +
Preference number: 4 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQFVLLA*LFLELA
Trigger: TGCAAGCTCAAGAAATAGCCAGGCAAGCAGCACAAA...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGGTGAAGCAACTCCAGTaGAAAGGCCACCTTTTGAAA +
Preference number: 4 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQVKQLQ*KGHLLK
Trigger: TTTCAAAAGGTGGCCTTTCCACTGGAGTTGCTTCAC...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTCATCTTCATCCCCTTaGTCATCACTGTCATCGTCA +
Preference number: 4 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQSSSSP*SSLSSS
Trigger: TGACGATGACAGTGATGACCAAGGGGATGAAGATGA...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAAATTTGCACCAGCATTTaGTTTGGGGGTCATAACCTC +
Preference number: 4 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQICTSI*FGGHNL
Trigger: GAGGTTATGACCCCCAAACCAAATGCTGGTGCAAAT...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGAGCGTTTTTAGTAACTaGTCATTGGGGAGAGGACTG +
Preference number: 4 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQSVFSN*SLGRGL
Trigger: CAGTCCTCTCCCCAATGACCAGTTACTAAAAACGCT...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGCAGGTTGAGCTGAAGTaGCCTTTTCATTCTGTGGTA +
Preference number: 4 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQQVELK*PFHSVV
Trigger: TACCACAGAATGAAAAGGCCACTTCAGCTCAACCTG...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAACCAAATCAGCCAGCCTaGTTACAGCTATATCTAGGG +
Preference number: 4 (lower is better)
Translates to: ADKSHKPITEGLGCCRNEPNQPA*LQLYLG
Trigger: CCCTAGATATAGCTGTAACCAGGCTGGCTGATTTGG...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAACACCATGAGACAGTCTaGAAATGTACTTCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: ADKSHKPITEGLGCCRNEHHETV*KCTSRE
Trigger: CTCTCTGGAAGTACATTTTCAGACTGTCTCATGGTG...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCACTCCATTTGGTTGGTaGTTACCTAAAAGTGCATTT +
Preference number: 4 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRTPFGW*LPKSAF
Trigger: AAATGCACTTTTAGGTAATCACCAACCAAATGGAGT...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAAACTACTGGGAATGTCTaGATCTGTTCCTCTGAATTG +
Preference number: 4 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQTTGNV*ICSSEL
Trigger: CAATTCAGAGGAACAGATTCAGACATTCCCAGTAGT...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGACTACTGGGAATGTCTaGATCTGTTCCTCTGAATTG +
Preference number: 4 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQTTGNV*ICSSEL
Trigger: CAATTCAGAGGAACAGATTCAGACATTCCCAGTAGT...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGCCAGACTCCATATTGTaGTCAATGTGGTCAATCTTG +
Preference number: 4 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQPDSIL*SMWSIL
Trigger: CAAGATTGACCACATTGATCACAATATGGAGTCTGG...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAAAGAAGGTGTCGAAGATaGAGTTGGTGTAGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: ADKSHKPITEGLGCCRNERRCRR*SWCSRG
Trigger: TCCTCTACTACACCAACTTCATCTTCGACACCTTCT...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGCTTCCCTGGACCACTTaGACCAGTATTAAACAGATT +
Preference number: 4 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQLPWTT*TSIKQI
Trigger: AATCTGTTTAATACTGGTTCAAGTGGTCCAGGGAAG...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTATCGGCATGAGTAAGTaGAGTGTCATCACAGGGTGT +
Preference number: 4 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCIGMSK*SVITGC
Trigger: ACACCCTGTGATGACACTTCACTTACTCATGCCGAT...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGGTTGACATATCGGCATaGGTAAGTGAAGTGTCATCA +
Preference number: 4 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQVDISA*VSEVSS
Trigger: TGATGACACTTCACTTACTCATGCCGATATGTCAAC...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTAAGCCAACAGGATTCTaGGCAGAAGATCCAAGAGGA +
Preference number: 4 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCKPTGF*AEDPRG
Trigger: TCCTCTTGGATCTTCTGCTCAGAATCCTGTTGGCTT...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCTTGATTTTTAGAGTTTaGCCACTTGCCTTAGCAATG +
Preference number: 4 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRLIFRV*PLALAM
Trigger: CATTGCTAAGGCAAGTGGTCAAACTCTAAAAATCAA...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTGGCCATGCATCCTCATaGGTTTCCATTTCAGTCAGA +
Preference number: 4 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCGHASS*VSISVR
Trigger: TCTGACTGAAATGGAAACTCATGAGGATGCATGGCC...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTTGGTGGAAAGAAGGTTaGTCCTGTACGAGTATGAGC +
Preference number: 4 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCWWKEG*SCTSMS
Trigger: GCTCATACTCGTACAGGAGCAACCTTCTTTCCACCA...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGAGGTGTCTGATGATGTaGCTGAATCACTATCACTGT +
Preference number: 4 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQRCLMM*LNHYHC
Trigger: ACAGTGATAGTGATTCAGGCACATCATCAGACACCT...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAAAGGTGTCTGATGATGTaGCTGAATCACTATCACTGT +
Preference number: 4 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQRCLMM*LNHYHC
Trigger: ACAGTGATAGTGATTCAGGCACATCATCAGACACCT...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGCTGGGCTTTTTCAGTTaGTTTCTGTCCATCTGCTTT +
Preference number: 4 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQLGFFS*FLSICF
Trigger: AAAGCAGATGGACAGAAAGCAACTGAAAAAGCCCAG...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCATTACTTCAGGGTACTaGCTAAGTTTCTTTCCACAT +
Preference number: 4 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRITSGY*LSFFPH
Trigger: ATGTGGAAAGAAACTTAGGCAGTACCCTGAAGTAAT...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAACCTGGATTCCTCTCTTaGTCGTTGTCTATCTGGATT +
Preference number: 4 (lower is better)
Translates to: ADKSHKPITEGLGCCRNEPGFLS*SLSIWI
Trigger: AATCCAGATAGACAACGAGCAAGAGAGGAATCCAGG...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAATTCTTCTTTTGGAAGTaGCAGAGTGTGGGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: ADKSHKPITEGLGCCRNEFFFWK*QSVGLK
Trigger: CTTCAAGCCCACACTCTGGCACTTCCAAAAGAAGAA...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAACTTCTCCCAGATCAATaGCACCTGAAGTGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: ADKSHKPITEGLGCCRNELLPDQ*HLKCLF
Trigger: AAAGAGACACTTCAGGTGGCATTGATCTGGGAGAAG...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGCTCCACCAACCAAACTaGATTTCTTCTGGAATAGGT +
Preference number: 4 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQLHQPN*ISSGIG
Trigger: ACCTATTCCAGAAGAAATGCAGTTTGGTTGGTGGAG...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAACTTATTCCTCTGAGATaGAGCACTTTGAGCAAAGCT +
Preference number: 4 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQLIPLR*STLSKA
Trigger: AGCTTTGCTCAAAGTGCTGCATCTCAGAGGAATAAG...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCTATATTGTTCCCGTTTaGATCTCAATTCACTGGTCA +
Preference number: 4 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRYIVPV*ISIHWS
Trigger: TGACCAGTGAATTGAGATCCAAACGGGAACAATATA...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCCAGAATCTTTACTACTaGGAATGTCTGAATCTGTTC +
Preference number: 4 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRQNLYY*ECLNLF
Trigger: GAACAGATTCAGACATTCCCAGTAGTAAAGATTCTG...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAATCTATCTGGATTTGGTaGTCTTCCTCTACGACCTTC +
Preference number: 4 (lower is better)
Translates to: ADKSHKPITEGLGCCRNESIWIW*SSSTTF
Trigger: GAAGGTCGTAGAGGAAGACCACCAAATCCAGATAGA...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAATTGTCTATCTGGATTTaGTGGTCTTCCTCTACGACC +
Preference number: 4 (lower is better)
Translates to: ADKSHKPITEGLGCCRNELSIWI*WSSSTT
Trigger: GGTCGTAGAGGAAGACCACCAAATCCAGATAGACAA...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCTGCCTTTTCCCCAGATaGTTGAAGGTTAAGATTTTT +
Preference number: 4 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRCLFPR*LKVKIF
Trigger: AAAAATCTTAACCTTCAACCATCTGGGGAAAAGGCA...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTGAGAGTTGCGGTAGATaGGATTTTTGCCTTTTCCCC +
Preference number: 4 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCESCGR*DFCLFP
Trigger: GGGGAAAAGGCAAAAATCCCATCTACCGCAACTCTC...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTCTGAATGCCCTGAGCTaGCTGAATGTAGACCAAAGA +
Preference number: 4 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCLNALS*LNVDQR
Trigger: TCTTTGGTCTACATTCAGCCAGCTCAGGGCATTCAG...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGATCACAGGGTGTTCGTaGCAAAAGACTAAACCATTG +
Preference number: 4 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQITGCS*QKTKPL
Trigger: CAATGGTTTAGTCTTTTGCCACGAACACCCTGTGAT...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCACTAGGAAAATCTACTaGTTTTGCTACTTCAACAGC +
Preference number: 4 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRTRKIY*FCYFNS
Trigger: GCTGTTGAAGTAGCAAAACCAGTAGATTTTCCTAGT...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTCCAAATCAGCCAGCCTaGTTACAGCTATATCTAGGG +
Preference number: 4 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCPNQPA*LQLYLG
Trigger: CCCTAGATATAGCTGTAACCAGGCTGGCTGATTTGG...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTCCATACCCTGAGCCCTaGAGCAATATCCTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCPYPEP*SNILFN
Trigger: ATTGAAGAGGATATTGCTCCAGGGCTCAGGGTATGG...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAATACTTCCTCATATTGTaGCCAGCTCTGCCTATATCA +
Preference number: 4 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQYFLIL*PALPIS
Trigger: TGATATAGGCAGAGCTGGCCACAATATGAGGAAGTA...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTACTTCCTCATATTGTaGCCAGCTCTGCCTATATCA +
Preference number: 4 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQYFLIL*PALPIS
Trigger: TGATATAGGCAGAGCTGGCCACAATATGAGGAAGTA...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTGCCTCTAGAATTTGCTaGGCTCGAAGTTCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCASRIC*ARSSFS
Trigger: GGAAAAAGAACTTCGAGCTCAGCAAATTCTAGAGGC...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAAGATTCCTCCTTTGCCTaGGAGCTTTGGAAAATAAAT +
Preference number: 4 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQDSSFA*ELWKIN
Trigger: ATTTATTTTCCAAAGCTCTCAGGCAAAGGAGGAATC...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGGGTTGCTTTTGGATTTaGCAAAGCTGCAATAACCTT +
Preference number: 4 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQGCFWI*QSCNNL
Trigger: AAGGTTATTGCAGCTTTGTCAAATCCAAAAGCAACC...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp CTGTATAGCTATCATTACCTTCAGACGAAAATAAAATGCTACAATCCTCTAAGGCAGGAAAGCCAGGACTaGAGCTTTCTGTGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: LYSYHYLQTKIKCYNPLRQESQD*SFLCWS
Trigger: ACTCCAGCACAGAAAGCTTCAGTCCTGGCTTTCCTG...CCTTAGAGGATTGTAGCATTTTATTTTCGTCTGAAGGTAATGATAGCTATACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAACTTCCCTGGACCACTTaGACCAGTATTAAACAGATT +
Preference number: 4 (lower is better)
Translates to: ADKSHKPITEGLGCCRNELPWTT*TSIKQI
Trigger: AATCTGTTTAATACTGGTTCAAGTGGTCCAGGGAAG...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTCACCAAAGAAGCAGTTaGCATATCGGCATGAGTAAG +
Preference number: 4 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCHQRSS*HIGMSK
Trigger: CTTACTCATGCCGATATGTCAACTGCTTCTTTGGTG...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAAAGATCTTCTACCTGTTaGAGGACACTCAAATCCATT +
Preference number: 4 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQRSSTC*RTLKSI
Trigger: AATGGATTTGAGTGTCCTTCAACAGGTAGAAGATCT...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGAGATCTTCTACCTGTTaGAGGACACTCAAATCCATT +
Preference number: 4 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQRSSTC*RTLKSI
Trigger: AATGGATTTGAGTGTCCTTCAACAGGTAGAAGATCT...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAACTTGTACTTCACCCATaGTGTCCCCTATATTTAGCA +
Preference number: 4 (lower is better)
Translates to: ADKSHKPITEGLGCCRNELVLHP*CPLYLA
Trigger: TGCTAAATATAGGGGACAGCATGGGTGAAGTACAAG...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAACTGGGCTTTTTCAGTTaGTTTCTGTCCATCTGCTTT +
Preference number: 4 (lower is better)
Translates to: ADKSHKPITEGLGCCRNELGFFS*FLSICF
Trigger: AAAGCAGATGGACAGAAAGCAACTGAAAAAGCCCAG...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAAATTCTTGTCTCTCTCTaGCAGCCATATTCCAATGGA +
Preference number: 4 (lower is better)
Translates to: ADKSHKPITEGLGCCRNEILVSL*QPYSNG
Trigger: TCCATTGGAATATGGCTGGCAGAGAGAGACAAGAAT...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTCTAGGAATTCAGCATTaGCAACATTTGGAGGTCGAC +
Preference number: 4 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCLGIQH*QHLEVD
Trigger: GTCGACCTCCAAATGTTGGCAATGCTGAATTCCTAG...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAAAAGCTTTATTTGTGCTaGTTGCCTGGCTATTTCTTG +
Preference number: 4 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQKLYLC*LPGYFL
Trigger: CAAGAAATAGCCAGGCAAGCAGCACAAATAAAGCTT...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAATTTATCTGTTCTTTTTaGTTCCGCTTCTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQFICSF*FRFSSA
Trigger: TGCTGAGGAGAAGCGGAAGCAAAAAGAACAGATAAA...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTCTTCTCCCAGATCAATaGCACCTGAAGTGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCLLPDQ*HLKCLF
Trigger: AAAGAGACACTTCAGGTGGCATTGATCTGGGAGAAG...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTTCTGATAAGACAACGTaGACCCATTTGCACCAGCAT +
Preference number: 4 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCSDKTT*THLHQH
Trigger: ATGCTGGTGCAAATGGGTGCACGTTGTCTTATCAGA...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAAAAAATCTACTGGTTTTaGTACTTCAACAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQKIYWF*YFNSCR
Trigger: CCTGCAGCTGTTGAAGTAGCAAAACCAGTAGATTTT...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp CTGTATAGCTATCATTACCTTCAGACGAAAATAAAATGCTACAATCCTCTAAGGCTACCTGTGCAGCACTaGGAGCTTCTGATAATGCCC +
Preference number: 4 (lower is better)
Translates to: LYSYHYLQTKIKCYNPLRLPVQH*ELLIMP
Trigger: GGGCATTATCAGAAGCTCGCAGTGCTGCACAGGTAG...CCTTAGAGGATTGTAGCATTTTATTTTCGTCTGAAGGTAATGATAGCTATACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTTCTGTAATTGCTGAATaGACAGAGCTACCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCSVIAE*TELPVQ
Trigger: CTGCACAGGTAGCTCTGTGCATTCAGCAATTACAGA...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTTCTGGCAAAGGCTTTTaGTCTGCTAAGCACATGTCT +
Preference number: 4 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCSGKGF*SAKHMS
Trigger: AGACATGTGCTTAGCAGACCAAAAGCCTTTGCCAGA...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCAAGTTTCTTTCCACATaGAGCATAATATGCTACTTC +
Preference number: 4 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRKFLST*SIICYF
Trigger: GAAGTAGCATATTATGCTCCATGTGGAAAGAAACTT...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTTTTGTGCTGCTTGCCTaGCTATTTCTTGAGCTTGCA +
Preference number: 4 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCFVLLA*LFLELA
Trigger: TGCAAGCTCAAGAAATAGCCAGGCAAGCAGCACAAA...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTGTGAAGCAACTCCAGTaGAAAGGCCACCTTTTGAAA +
Preference number: 4 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCVKQLQ*KGHLLK
Trigger: TTTCAAAAGGTGGCCTTTCCACTGGAGTTGCTTCAC...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp CTGTATAGCTATCATTACCTTCAGACGAAAATAAAATGCTACAATCCTCTAAGGAGACCAAAGACTGGGTaGCTGACCATTGGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: LYSYHYLQTKIKCYNPLRRPKTG*LTIGKA
Trigger: TGCCTTCCCAATGGTCAGCCACCCAGTCTTTGGTCT...CCTTAGAGGATTGTAGCATTTTATTTTCGTCTGAAGGTAATGATAGCTATACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAAAGAAAAGCAGGTGACTaGGATTCAGAACATAAGGCA +
Preference number: 4 (lower is better)
Translates to: ADKSHKPITEGLGCCRNERKAGD*DSEHKA
Trigger: TGCCTTATGTTCTGAATCCCAGTCACCTGCTTTTCT...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTCAGTTTGTCCACAGTaGGCTTCCATAAATATCTGT +
Preference number: 4 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQSVCPQ*ASINIC
Trigger: ACAGATATTTATGGAAGCCCACTGTGGACAAACTGA...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTTCATCTTCATCCCCTTaGTCATCACTGTCATCGTCA +
Preference number: 4 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCSSSSP*SSLSSS
Trigger: TGACGATGACAGTGATGACCAAGGGGATGAAGATGA...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAATTAGTAACTGGTCATTaGGGAGAGGACTGTAGAACT +
Preference number: 4 (lower is better)
Translates to: ADKSHKPITEGLGCCRNELVTGH*GEDCRT
Trigger: AGTTCTACAGTCCTCTCCCCAATGACCAGTTACTAA...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTAGCGTTTTTAGTAACTaGTCATTGGGGAGAGGACTG +
Preference number: 4 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCSVFSN*SLGRGL
Trigger: CAGTCCTCTCCCCAATGACCAGTTACTAAAAACGCT...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTTCGATTTCCTCCACCTaGGCTTGTACTTTTAGTTTG +
Preference number: 4 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCSISST*ACTFSL
Trigger: CAAACTAAAAGTACAAGCTCAGGTGGAGGAAATCGA...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp CTGTATAGCTATCATTACCTTCAGACGAAAATAAAATGCTACAATCCTCTAAGGTGGGATTGGAATGAGTaGGTCTGGGATTCAGACGCA +
Preference number: 4 (lower is better)
Translates to: LYSYHYLQTKIKCYNPLRWDWNE*VWDSDA
Trigger: TGCGTCTGAATCCCAGACTCACTCATTCCAATCCCA...CCTTAGAGGATTGTAGCATTTTATTTTCGTCTGAAGGTAATGATAGCTATACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGCTGAATCTGTTCCTCTaGATTGTTCCACTAAAGATT +
Preference number: 4 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQLNLFL*IVPLKI
Trigger: AATCTTTAGTGGAACAATTCAGAGGAACAGATTCAG...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGGCTGAAATTGTCCCTTaGGATATCCATTATTCCATT +
Preference number: 4 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQAEIVP*DIHYSI
Trigger: AATGGAATAATGGATATCTCAAGGGACAATTTCAGC...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392783.7
CDS-3UTR TCA 90 bp CTGTATAGCTATCATTACCTTCAGACGAAAATAAAATGCTACAATCCTCTAAGGGCCAGAGTGTGGGCTTaGAGTAAGTGTGGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: LYSYHYLQTKIKCYNPLRARVWA*SKCGRR
Trigger: TCTTCTTCCACACTTACTTCAAGCCCACACTCTGGC...CCTTAGAGGATTGTAGCATTTTATTTTCGTCTGAAGGTAATGATAGCTATACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp CTGTATAGCTATCATTACCTTCAGACGAAAATAAAATGCTACAATCCTCTAAGGTGCATGCCAGTTCATTaGTCAGGAAAGCCAGGACTG +
Preference number: 4 (lower is better)
Translates to: LYSYHYLQTKIKCYNPLRCMPVH*SGKPGL
Trigger: CAGTCCTGGCTTTCCTGATCAATGAACTGGCATGCA...CCTTAGAGGATTGTAGCATTTTATTTTCGTCTGAAGGTAATGATAGCTATACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTGTTGACATATCGGCATaGGTAAGTGAAGTGTCATCA +
Preference number: 4 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCVDISA*VSEVSS
Trigger: TGATGACACTTCACTTACTCATGCCGATATGTCAAC...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTTGCTTGTTCTTCTACTaGCCAGTTCTCCACAATATC +
Preference number: 4 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCCLFFY*PVLHNI
Trigger: GATATTGTGGAGAACTGGTCAGTAGAAGAACAAGCA...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp CTGTATAGCTATCATTACCTTCAGACGAAAATAAAATGCTACAATCCTCTAAGGTTACAGGTGTCTGATTaGCAGGGGTTCTTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: LYSYHYLQTKIKCYNPLRLQVSD*QGFFSH
Trigger: GTGGGAGAAGAACCCCTGGCAATCAGACACCTGTAA...CCTTAGAGGATTGTAGCATTTTATTTTCGTCTGAAGGTAATGATAGCTATACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTATTCTTGTCTCTCTCTaGCAGCCATATTCCAATGGA +
Preference number: 4 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCILVSL*QPYSNG
Trigger: TCCATTGGAATATGGCTGGCAGAGAGAGACAAGAAT...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAAAAGCTTTATTTGTGCTaGTTGCCTGGCTATTTCTTG +
Preference number: 4 (lower is better)
Translates to: ADKSHKPITEGLGCCRNEKLYLC*LPGYFL
Trigger: CAAGAAATAGCCAGGCAAGCAGCACAAATAAAGCTT...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAAAAAATCTACTGGTTTTaGTACTTCAACAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: ADKSHKPITEGLGCCRNEKIYWF*YFNSCR
Trigger: CCTGCAGCTGTTGAAGTAGCAAAACCAGTAGATTTT...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAAAAAATTCTTTGGGTGTaGTTCCCTGTTCTACCTAAA +
Preference number: 4 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQKILWV*FPVLPK
Trigger: TTTAGGTAGAACAGGGAAGCACACCCAAAGAATTTT...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAATGCATTTGTCAAGAATaGATTTGGGTGGTTGTTTTC +
Preference number: 4 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQCICQE*IWVVVF
Trigger: GAAAACAACCACCCAAATCCATTCTTGACAAATGCA...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp CTGTATAGCTATCATTACCTTCAGACGAAAATAAAATGCTACAATCCTCTAAGGCTTGACTATGCAGGATaGGAGAGGCAGAGGGCATTA +
Preference number: 4 (lower is better)
Translates to: LYSYHYLQTKIKCYNPLRLDYAG*ERQRAL
Trigger: TAATGCCCTCTGCCTCTCCCATCCTGCATAGTCAAG...CCTTAGAGGATTGTAGCATTTTATTTTCGTCTGAAGGTAATGATAGCTATACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGCAGAATCTTTACTACTaGGAATGTCTGAATCTGTTC +
Preference number: 4 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQQNLYY*ECLNLF
Trigger: GAACAGATTCAGACATTCCCAGTAGTAAAGATTCTG...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp CTGTATAGCTATCATTACCTTCAGACGAAAATAAAATGCTACAATCCTCTAAGGTCCGACGTCTCATCCTaGATTCCTCTCTTGCTCGTT +
Preference number: 4 (lower is better)
Translates to: LYSYHYLQTKIKCYNPLRSDVSS*IPLLLV
Trigger: AACGAGCAAGAGAGGAATCCAGGATGAGACGTCGGA...CCTTAGAGGATTGTAGCATTTTATTTTCGTCTGAAGGTAATGATAGCTATACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAACTATCTGATTCTGATTaGCTGTCATCAGATTCATCA +
Preference number: 4 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQLSDSD*LSSDSS
Trigger: TGATGAATCTGATGACAGCCAATCAGAATCAGATAG...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGCTATCTGATTCTGATTaGCTGTCATCAGATTCATCA +
Preference number: 4 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQLSDSD*LSSDSS
Trigger: TGATGAATCTGATGACAGCCAATCAGAATCAGATAG...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp CTGTATAGCTATCATTACCTTCAGACGAAAATAAAATGCTACAATCCTCTAAGGGGGGCTTTTGCTATGTaGAGGTTACGAGGTGTTGAG +
Preference number: 4 (lower is better)
Translates to: LYSYHYLQTKIKCYNPLRGAFAM*RLRGVE
Trigger: CTCAACACCTCGTAACCTCCACATAGCAAAAGCCCC...CCTTAGAGGATTGTAGCATTTTATTTTCGTCTGAAGGTAATGATAGCTATACAG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAATCAGTTTGTCCACAGTaGGCTTCCATAAATATCTGT +
Preference number: 4 (lower is better)
Translates to: ADKSHKPITEGLGCCRNESVCPQ*ASINIC
Trigger: ACAGATATTTATGGAAGCCCACTGTGGACAAACTGA...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTTTAGTAACTGGTCATTaGGGAGAGGACTGTAGAACT +
Preference number: 4 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCLVTGH*GEDCRT
Trigger: AGTTCTACAGTCCTCTCCCCAATGACCAGTTACTAA...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAAACTAGGAAAATCTACTaGTTTTGCTACTTCAACAGC +
Preference number: 4 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQTRKIY*FCYFNS
Trigger: GCTGTTGAAGTAGCAAAACCAGTAGATTTTCCTAGT...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAAAAACTGCATTTCTTCTaGAATAGGTTTTGGACTAGG +
Preference number: 4 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQKLHFF*NRFWTR
Trigger: CCTAGTCCAAAACCTATTCCAGAAGAAATGCAGTTT...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTAAACCAGTCTCCATCTaGGATTGTTGTAATCTTGGG +
Preference number: 4 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCKPVSI*DCCNLG
Trigger: CCCAAGATTACAACAATCCCAGATGGAGACTGGTTT...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAACCTTTGAAAATTCTTTaGGTGTGCTTCCCTGTTCTA +
Preference number: 4 (lower is better)
Translates to: ADKSHKPITEGLGCCRNEPLKIL*VCFPVL
Trigger: TAGAACAGGGAAGCACACCCAAAGAATTTTCAAAGG...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTTTGTGCTTCACTCTCTaGATCAGAATCATCATCTTC +
Preference number: 4 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCLCFTL*IRIIIF
Trigger: GAAGATGATGATTCTGATTCAGAGAGTGAAGCACAA...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAAACTCCATTTGGTTGGTaGTTACCTAAAAGTGCATTT +
Preference number: 4 (lower is better)
Translates to: ADKSHKPITEGLGCCRNETPFGW*LPKSAF
Trigger: AAATGCACTTTTAGGTAATCACCAACCAAATGGAGT...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAACTGAATCTGTTCCTCTaGATTGTTCCACTAAAGATT +
Preference number: 4 (lower is better)
Translates to: ADKSHKPITEGLGCCRNELNLFL*IVPLKI
Trigger: AATCTTTAGTGGAACAATTCAGAGGAACAGATTCAG...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp CTGTATAGCTATCATTACCTTCAGACGAAAATAAAATGCTACAATCCTCTAAGGACTGAACGCAATGAGTaGGACGCATCAAAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: LYSYHYLQTKIKCYNPLRTERNE*DASKSF
Trigger: GAAGCTCTTTGATGCGTCTCACTCATTGCGTTCAGT...CCTTAGAGGATTGTAGCATTTTATTTTCGTCTGAAGGTAATGATAGCTATACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAATTGATTTTTAGAGTTTaGCCACTTGCCTTAGCAATG +
Preference number: 4 (lower is better)
Translates to: ADKSHKPITEGLGCCRNELIFRV*PLALAM
Trigger: CATTGCTAAGGCAAGTGGTCAAACTCTAAAAATCAA...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAAAACTTCAGCTCACTTTaGAAGTATCTGTCCACTTTT +
Preference number: 4 (lower is better)
Translates to: ADKSHKPITEGLGCCRNENFSSL*KYLSTF
Trigger: AAAAGTGGACAGATACTTTCAAAGTGAGCTGAAGTT...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTCAATCCTCTAAGGCATaGACAATAATGTCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCQSSKA*TIMSAN
Trigger: GTTTGCAGACATTATTGTTCATGCCTTAGAGGATTG...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGAATTCTAATCTTCGCTaGTCTAGTTTACGCTCTTTA +
Preference number: 4 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQNSNLR*SSLRSL
Trigger: TAAAGAGCGTAAACTAGAGCAGCGAAGATTAGAATT...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTCAAAAGCTTTATTTGTaGTGCTTGCCTGGCTATTTC +
Preference number: 4 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCQKLYL*CLPGYF
Trigger: GAAATAGCCAGGCAAGCAGCACAAATAAAGCTTTTG...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTTTTATCTGTTCTTTTTaGTTCCGCTTCTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCFICSF*FRFSSA
Trigger: TGCTGAGGAGAAGCGGAAGCAAAAAGAACAGATAAA...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp CTGTATAGCTATCATTACCTTCAGACGAAAATAAAATGCTACAATCCTCTAAGGCCACCAAATTCTGAATaGCCTGAGCTGGCTGAATGT +
Preference number: 4 (lower is better)
Translates to: LYSYHYLQTKIKCYNPLRPPNSE*PELAEC
Trigger: ACATTCAGCCAGCTCAGGGCATTCAGAATTTGGTGG...CCTTAGAGGATTGTAGCATTTTATTTTCGTCTGAAGGTAATGATAGCTATACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGCAGACGAAAATAAAATaGTACAATCCTCTAAGGCAT +
Preference number: 4 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQQTKIK*YNPLRH
Trigger: ATGCCTTAGAGGATTGTAGCATTTTATTTTCGTCTG...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp CTGTATAGCTATCATTACCTTCAGACGAAAATAAAATGCTACAATCCTCTAAGGAATACGAGGCAACTCTaGCAAAGGCTTTTGGTCTGC +
Preference number: 4 (lower is better)
Translates to: LYSYHYLQTKIKCYNPLRNTRQL*QRLLVC
Trigger: GCAGACCAAAAGCCTTTGCCAGAGTTGCCTCGTATT...CCTTAGAGGATTGTAGCATTTTATTTTCGTCTGAAGGTAATGATAGCTATACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAACCATGTAATAGCACCTaGTTGTTACTTTTATGTTGT +
Preference number: 4 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQPCNST*LLLLCC
Trigger: ACAACATAAAAGTAACAACCAGGTGCTATTACATGG...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAATATATTGTTCCCGTTTaGATCTCAATTCACTGGTCA +
Preference number: 4 (lower is better)
Translates to: ADKSHKPITEGLGCCRNEYIVPV*ISIHWS
Trigger: TGACCAGTGAATTGAGATCCAAACGGGAACAATATA...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAATGCCTTTTCCCCAGATaGTTGAAGGTTAAGATTTTT +
Preference number: 4 (lower is better)
Translates to: ADKSHKPITEGLGCCRNECLFPR*LKVKIF
Trigger: AAAAATCTTAACCTTCAACCATCTGGGGAAAAGGCA...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAAAAACTGCATTTCTTCTaGAATAGGTTTTGGACTAGG +
Preference number: 4 (lower is better)
Translates to: ADKSHKPITEGLGCCRNEKLHFF*NRFWTR
Trigger: CCTAGTCCAAAACCTATTCCAGAAGAAATGCAGTTT...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAATACAGTTCACATTGCTaGTCTCATTTGTCCTTGTTT +
Preference number: 4 (lower is better)
Translates to: ADKSHKPITEGLGCCRNEYSSHC*SHLSLF
Trigger: AAACAAGGACAAATGAGACCAGCAATGTGAACTGTA...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp CTGTATAGCTATCATTACCTTCAGACGAAAATAAAATGCTACAATCCTCTAAGGACTCAGATTTACAGGTaGGGAAAAAGGGGTGCTACT +
Preference number: 4 (lower is better)
Translates to: LYSYHYLQTKIKCYNPLRTQIYR*GKRGAT
Trigger: AGTAGCACCCCTTTTTCCTCACCTGTAAATCTGAGT...CCTTAGAGGATTGTAGCATTTTATTTTCGTCTGAAGGTAATGATAGCTATACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp CTGTATAGCTATCATTACCTTCAGACGAAAATAAAATGCTACAATCCTCTAAGGTGCCTGGCTATTTCTTaGGCTTGCAGTTTTCTTAGC +
Preference number: 4 (lower is better)
Translates to: LYSYHYLQTKIKCYNPLRCLAIS*ACSFLS
Trigger: GCTAAGAAAACTGCAAGCTCAAGAAATAGCCAGGCA...CCTTAGAGGATTGTAGCATTTTATTTTCGTCTGAAGGTAATGATAGCTATACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp CTGTATAGCTATCATTACCTTCAGACGAAAATAAAATGCTACAATCCTCTAAGGCCTGTTTTCTTAGCATaGATGATTCTGAGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: LYSYHYLQTKIKCYNPLRPVFLA*MILSLR
Trigger: CCGCAAGCTCAGAATCATTCATGCTAAGAAAACAGG...CCTTAGAGGATTGTAGCATTTTATTTTCGTCTGAAGGTAATGATAGCTATACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp CTGTATAGCTATCATTACCTTCAGACGAAAATAAAATGCTACAATCCTCTAAGGGGCCATCCACAAAACTaGAGTCCCATCATAGATACT +
Preference number: 4 (lower is better)
Translates to: LYSYHYLQTKIKCYNPLRGHPQN*SPIIDT
Trigger: AGTATCTATGATGGGACTTCAGTTTTGTGGATGGCC...CCTTAGAGGATTGTAGCATTTTATTTTCGTCTGAAGGTAATGATAGCTATACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTAACTTCAGCTCACTTTaGAAGTATCTGTCCACTTTT +
Preference number: 4 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCNFSSL*KYLSTF
Trigger: AAAAGTGGACAGATACTTTCAAAGTGAGCTGAAGTT...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAAAATTCTAATCTTCGCTaGTCTAGTTTACGCTCTTTA +
Preference number: 4 (lower is better)
Translates to: ADKSHKPITEGLGCCRNENSNLR*SSLRSL
Trigger: TAAAGAGCGTAAACTAGAGCAGCGAAGATTAGAATT...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTATTACTTCAGGGTACTaGCTAAGTTTCTTTCCACAT +
Preference number: 4 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCITSGY*LSFFPH
Trigger: ATGTGGAAAGAAACTTAGGCAGTACCCTGAAGTAAT...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp CTGTATAGCTATCATTACCTTCAGACGAAAATAAAATGCTACAATCCTCTAAGGCCTGGATTCCTCTCTTaGTCGTTGTCTATCTGGATT +
Preference number: 4 (lower is better)
Translates to: LYSYHYLQTKIKCYNPLRPGFLS*SLSIWI
Trigger: AATCCAGATAGACAACGAGCAAGAGAGGAATCCAGG...CCTTAGAGGATTGTAGCATTTTATTTTCGTCTGAAGGTAATGATAGCTATACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp CTGTATAGCTATCATTACCTTCAGACGAAAATAAAATGCTACAATCCTCTAAGGTCTCGAACTGAGAGTTaGGGTAGATGGGATTTTTGC +
Preference number: 4 (lower is better)
Translates to: LYSYHYLQTKIKCYNPLRSRTES*GRWDFC
Trigger: GCAAAAATCCCATCTACCGCAACTCTCAGTTCGAGA...CCTTAGAGGATTGTAGCATTTTATTTTCGTCTGAAGGTAATGATAGCTATACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp CTGTATAGCTATCATTACCTTCAGACGAAAATAAAATGCTACAATCCTCTAAGGCTGCCTTTTCCACATTaGTTTGCGTTGCTGTTGACT +
Preference number: 4 (lower is better)
Translates to: LYSYHYLQTKIKCYNPLRLPFPH*FALLLT
Trigger: AGTCAACAGCAACGCAAAGCAATGTGGAAAAGGCAG...CCTTAGAGGATTGTAGCATTTTATTTTCGTCTGAAGGTAATGATAGCTATACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTAAAATTCTTTGGGTGTaGTTCCCTGTTCTACCTAAA +
Preference number: 4 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCKILWV*FPVLPK
Trigger: TTTAGGTAGAACAGGGAAGCACACCCAAAGAATTTT...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAACAGACGAAAATAAAATaGTACAATCCTCTAAGGCAT +
Preference number: 4 (lower is better)
Translates to: ADKSHKPITEGLGCCRNEQTKIK*YNPLRH
Trigger: ATGCCTTAGAGGATTGTAGCATTTTATTTTCGTCTG...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTTGCATTTGTCAAGAATaGATTTGGGTGGTTGTTTTC +
Preference number: 4 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCCICQE*IWVVVF
Trigger: GAAAACAACCACCCAAATCCATTCTTGACAAATGCA...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp CTGTATAGCTATCATTACCTTCAGACGAAAATAAAATGCTACAATCCTCTAAGGCCAGCCATATTCCAATaGAATACGCAGTTCACGTTC +
Preference number: 4 (lower is better)
Translates to: LYSYHYLQTKIKCYNPLRPAIFQ*NTQFTF
Trigger: GAACGTGAACTGCGTATTCCATTGGAATATGGCTGG...CCTTAGAGGATTGTAGCATTTTATTTTCGTCTGAAGGTAATGATAGCTATACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp CTGTATAGCTATCATTACCTTCAGACGAAAATAAAATGCTACAATCCTCTAAGGTTACTCTTCTTCTTTTaGAAGTGCCAGAGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: LYSYHYLQTKIKCYNPLRLLFFF*KCQSVG
Trigger: GCCCACACTCTGGCACTTCCAAAAGAAGAAGAGTAA...CCTTAGAGGATTGTAGCATTTTATTTTCGTCTGAAGGTAATGATAGCTATACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAAAAAGCTTGCTTAATTTaGAAAAAGAGCCAGGTTTCT +
Preference number: 4 (lower is better)
Translates to: ADKSHKPITEGLGCCRNEKACLI*KKSQVS
Trigger: AGAAACCTGGCTCTTTTTCCAAATTAAGCAAGCTTT...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTTACAGTTCACATTGCTaGTCTCATTTGTCCTTGTTT +
Preference number: 4 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCYSSHC*SHLSLF
Trigger: AAACAAGGACAAATGAGACCAGCAATGTGAACTGTA...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp CTGTATAGCTATCATTACCTTCAGACGAAAATAAAATGCTACAATCCTCTAAGGACTCCACCTTTCACCTaGAGAGGTGATAAAGCAAAT +
Preference number: 4 (lower is better)
Translates to: LYSYHYLQTKIKCYNPLRTPPFT*RGDKAN
Trigger: ATTTGCTTTATCACCTCTTCAGGTGAAAGGTGGAGT...CCTTAGAGGATTGTAGCATTTTATTTTCGTCTGAAGGTAATGATAGCTATACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp CTGTATAGCTATCATTACCTTCAGACGAAAATAAAATGCTACAATCCTCTAAGGTGCTTGTTCTTCTACTaGCCAGTTCTCCACAATATC +
Preference number: 4 (lower is better)
Translates to: LYSYHYLQTKIKCYNPLRCLFFY*PVLHNI
Trigger: GATATTGTGGAGAACTGGTCAGTAGAAGAACAAGCA...CCTTAGAGGATTGTAGCATTTTATTTTCGTCTGAAGGTAATGATAGCTATACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR TCA 90 bp CTGTATAGCTATCATTACCTTCAGACGAAAATAAAATGCTACAATCCTCTAAGGGATTTCTGTAATTGCTaGATGCACAGAGCTACCTGT +
Preference number: 4 (lower is better)
Translates to: LYSYHYLQTKIKCYNPLRDFCNC*MHRATC
Trigger: ACAGGTAGCTCTGTGCATTCAGCAATTACAGAAATC...CCTTAGAGGATTGTAGCATTTTATTTTCGTCTGAAGGTAATGATAGCTATACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp CTGTATAGCTATCATTACCTTCAGACGAAAATAAAATGCTACAATCCTCTAAGGAAGTTTCGTAAGAACTaGACCACCATGAGACAGTCT +
Preference number: 4 (lower is better)
Translates to: LYSYHYLQTKIKCYNPLRKFRKN*TTMRQS
Trigger: AGACTGTCTCATGGTGGTGCAGTTCTTACGAAACTT...CCTTAGAGGATTGTAGCATTTTATTTTCGTCTGAAGGTAATGATAGCTATACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp CTGTATAGCTATCATTACCTTCAGACGAAAATAAAATGCTACAATCCTCTAAGGCTTATTCCTCTGAGATaGAGCACTTTGAGCAAAGCT +
Preference number: 4 (lower is better)
Translates to: LYSYHYLQTKIKCYNPLRLIPLR*STLSKA
Trigger: AGCTTTGCTCAAAGTGCTGCATCTCAGAGGAATAAG...CCTTAGAGGATTGTAGCATTTTATTTTCGTCTGAAGGTAATGATAGCTATACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTAAAGCTTGCTTAATTTaGAAAAAGAGCCAGGTTTCT +
Preference number: 4 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCKACLI*KKSQVS
Trigger: AGAAACCTGGCTCTTTTTCCAAATTAAGCAAGCTTT...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp CTGTATAGCTATCATTACCTTCAGACGAAAATAAAATGCTACAATCCTCTAAGGAAACCAGTCTCCATCTaGGATTGTTGTAATCTTGGG +
Preference number: 4 (lower is better)
Translates to: LYSYHYLQTKIKCYNPLRKPVSI*DCCNLG
Trigger: CCCAAGATTACAACAATCCCAGATGGAGACTGGTTT...CCTTAGAGGATTGTAGCATTTTATTTTCGTCTGAAGGTAATGATAGCTATACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
3UTR CAA 72 bp GAAAGGAGAACCATTTCCCACATTAGAGCTCTGGTGTaGAGTATTCAGTGCGATTTGATATATTTTAATTGC +
Preference number: 4 (lower is better)
Translates to: ERRTISHIRALV*SIQCDLIYFNC
Trigger: GCAATTAAAATATATCAAATCGCACTGAATACTCAACACCAGAGCTCTAATGTGGGAAATGGTTCTCCTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR GCA 90 bp CTGTATAGCTATCATTACCTTCAGACGAAAATAAAATGCTACAATCCTCTAAGGTATTGTGGCCAGCTCTaGCTATATCAGAATCATCTT +
Preference number: 4 (lower is better)
Translates to: LYSYHYLQTKIKCYNPLRYCGQL*LYQNHL
Trigger: AAGATGATTCTGATATAGGCAGAGCTGGCCACAATA...CCTTAGAGGATTGTAGCATTTTATTTTCGTCTGAAGGTAATGATAGCTATACAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CCA 90 bp CTGTATAGCTATCATTACCTTCAGACGAAAATAAAATGCTACAATCCTCTAAGGAAGTTTCTTTCCACATaGAGCATAATATGCTACTTC +
Preference number: 4 (lower is better)
Translates to: LYSYHYLQTKIKCYNPLRKFLST*SIICYF
Trigger: GAAGTAGCATATTATGCTCCATGTGGAAAGAAACTT...CCTTAGAGGATTGTAGCATTTTATTTTCGTCTGAAGGTAATGATAGCTATACAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS GCA 90 bp CCCTTCCTTCTTCGCTTGCGTCCTGGAGTGGGTGTGCCCAAGGGATaGTGCTCTTCTCCCAGATCAATGCCACCTGAAGTGTCTCTTTTG +
Preference number: 5 (lower is better)
Translates to: PFLLRLRPGVGVPKG*CSSPRSMPPEVSLL
Trigger: CAAAAGAGACACTTCAGGTGGCATTGATCTGGGAGAAGAGCAGCATCCCTTGGGCACACCCACTCCAGGACGCAAGCGAAGAAGGAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS GCA 90 bp TTCCTTCTTCGCTTGCGTCCTGGAGTGGGTGTGCCCAAGGGATGCTaGTCTTCTCCCAGATCAATGCCACCTGAAGTGTCTCTTTTGCCT +
Preference number: 5 (lower is better)
Translates to: FLLRLRPGVGVPKGC*SSPRSMPPEVSLLP
Trigger: AGGCAAAAGAGACACTTCAGGTGGCATTGATCTGGGAGAAGAGCAGCATCCCTTGGGCACACCCACTCCAGGACGCAAGCGAAGAAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS GCA 90 bp AAGGCTGTGGGTGTACCAAGTGTCCCCAAACCACCAAATTCTGAATaGCCTGAGCTGGCTGAATGTAGACCAAAGACTGGGTGGCTGACC +
Preference number: 5 (lower is better)
Translates to: KAVGVPSVPKPPNSE*PELAECRPKTGWLT
Trigger: GGTCAGCCACCCAGTCTTTGGTCTACATTCAGCCAGCTCAGGGCATTCAGAATTTGGTGGTTTGGGGACACTTGGTACACCCACAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392782.5
ENST00000392783.7
ENST00000437839.5
ENST00000482503.5
CDS-3UTR CAA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGCCCTTCCTTCTTCGCTaGCGTCCTGGAGTGGGTGTG +
Preference number: 5 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQPFLLR*RPGVGV
Trigger: CACACCCACTCCAGGACGCAAGCGAAGAAGGAAGGG...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCTGCTTTGCGTTGCTGTaGACTGAACGCTGCCCAGTG +
Preference number: 5 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRCFALL*TERCPV
Trigger: CACTGGGCAGCGTTCAGTCAACAGCAACGCAAAGCA...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS GCA 90 bp ATTTGGAGGTCGACCTTTCCGACGTCTCATCCTGGATTCCTCTCTTaGTCGTTGTCTATCTGGATTTGGTGGTCTTCCTCTACGACCTTC +
Preference number: 5 (lower is better)
Translates to: IWRSTFPTSHPGFLS*SLSIWIWWSSSTTF
Trigger: GAAGGTCGTAGAGGAAGACCACCAAATCCAGATAGACAACGAGCAAGAGAGGAATCCAGGATGAGACGTCGGAAAGGTCGACCTCCAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343439.9
ENST00000392782.5
ENST00000392783.7
ENST00000472953.1
ENST00000482501.5
CDS CCA 90 bp CAGCATTGCCAACATTTGGAGGTCGACCTTTCCGACGTCTCATCCTaGATTCCTCTCTTGCTCGTTGTCTATCTGGATTTGGTGGTCTTC +
Preference number: 5 (lower is better)
Translates to: QHCQHLEVDLSDVSS*IPLLLVVYLDLVVF
Trigger: GAAGACCACCAAATCCAGATAGACAACGAGCAAGAGAGGAATCCAGGATGAGACGTCGGAAAGGTCGACCTCCAAATGTTGGCAATGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343439.9
ENST00000392782.5
ENST00000392783.7
ENST00000472953.1
ENST00000482501.5
CDS CCA 90 bp GTATCAGTTGTCTGCCCTTGTTATCATGCGGCTGACCAGGAGCTGTaGCTCACTGCTGCTGCTCAGCATCAAGGGATTATTGTACCAATT +
Preference number: 5 (lower is better)
Translates to: VSVVCPCYHAADQEL*LTAAAQHQGIIVPI
Trigger: AATTGGTACAATAATCCCTTGATGCTGAGCAGCAGCAGTGAGCCACAGCTCCTGGTCAGCCGCATGATAACAAGGGCAGACAACTGATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472953.1
CDS-3UTR CAA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCCAGCATTGCCAACATTaGGAGGTCGACCTTTCCGAC +
Preference number: 5 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRQHCQH*EVDLSD
Trigger: GTCGGAAAGGTCGACCTCCAAATGTTGGCAATGCTG...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS TCA 90 bp GGGTGTGCCCAAGGGATGCTGCTCTTCTCCCAGATCAATGCCACCTaGAGTGTCTCTTTTGCCTGTTTTCTTAGCATGAATGATTCTGAG +
Preference number: 5 (lower is better)
Translates to: GCAQGMLLFSQINAT*SVSFACFLSMNDSE
Trigger: CTCAGAATCATTCATGCTAAGAAAACAGGCAAAAGAGACACTTCAGGTGGCATTGATCTGGGAGAAGAGCAGCATCCCTTGGGCACACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS GCA 90 bp CAGCAGCTGAGAGGAGCCTCACAAGCAAGTCTTGTACTTCACCCATaGTGTCCCCTATATTTAGCAATCCCTCTTGAAGAACACTCAGGT +
Preference number: 5 (lower is better)
Translates to: QQLRGASQASLVLHP*CPLYLAIPLEEHSG
Trigger: ACCTGAGTGTTCTTCAAGAGGGATTGCTAAATATAGGGGACAGCATGGGTGAAGTACAAGACTTGCTTGTGAGGCTCCTCTCAGCTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294905.4
ENST00000392782.5
ENST00000392783.7
ENST00000485917.1
ENST00000551504.5
CDS CCA 90 bp TGGAGCAATATCCTCTTCAATTCCGTCACCATCACCACTAACGGATaGTGCAGGAGCAGGGACAGTAACTGTGCCCACATTATCCAGTTT +
Preference number: 5 (lower is better)
Translates to: WSNILFNSVTITTNG*CRSRDSNCAHIIQF
Trigger: AAACTGGATAATGTGGGCACAGTTACTGTCCCTGCTCCTGCACCATCCGTTAGTGGTGATGGTGACGGAATTGAAGAGGATATTGCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426648.1
CDS-3UTR CAA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCTCGGCCTCCAATAATTaGGCATTTGCCGCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRSASNN*AFAASS
Trigger: GGAAGAAGCGGCAAATGCCAAATTATTGGAGGCCGA...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAACAGAGCCTGGGGCTTTaGCTATGTGGAGGTTACGAG +
Preference number: 5 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQQSLGL*LCGGYE
Trigger: CTCGTAACCTCCACATAGCAAAAGCCCCAGGCTCTG...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGCAGAGCCTGGGGCTTTaGCTATGTGGAGGTTACGAG +
Preference number: 5 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQQSLGL*LCGGYE
Trigger: CTCGTAACCTCCACATAGCAAAAGCCCCAGGCTCTG...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTCCCTTCCTTCTTCGCTaGCGTCCTGGAGTGGGTGTG +
Preference number: 5 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCPFLLR*RPGVGV
Trigger: CACACCCACTCCAGGACGCAAGCGAAGAAGGAAGGG...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS TCA 90 bp CTGACCATTGGGAAGGCACTCGACACTGTGGACAGGTTAAACGGTTaGTCCCCAGCTGTTCTGAATAAATGTCCACATGGGTTGATTGTA +
Preference number: 5 (lower is better)
Translates to: LTIGKALDTVDRLNG*SPAVLNKCPHGLIV
Trigger: TACAATCAACCCATGTGGACATTTATTCAGAACAGCTGGGGATCAACCGTTTAACCTGTCCACAGTGTCGAGTGCCTTCCCAATGGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392782.5
ENST00000392783.7
ENST00000437839.5
ENST00000482503.5
CDS TCA 90 bp GGAATTCCCAGTAATGGTGGAAAGAAGGTTGCTCCTGTACGAGTATaGGCATCAGTTGTTCGCCACCATTCTGCACCTGGAAAAGATGCT +
Preference number: 5 (lower is better)
Translates to: GIPSNGGKKVAPVRV*ASVVRHHSAPGKDA
Trigger: AGCATCTTTTCCAGGTGCAGAATGGTGGCGAACAACTGATGCTCATACTCGTACAGGAGCAACCTTCTTTCCACCATTACTGGGAATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392783.7
ENST00000437839.5
CDS TCA 90 bp GGAATTCCCAGTAATGGTGGAAAGAAGGTTGCTCCTGTACGAGTATaGGCATCAGTTGTTCGCCACCATTCTGCACCACATGGGTTGATT +
Preference number: 5 (lower is better)
Translates to: GIPSNGGKKVAPVRV*ASVVRHHSAPHGLI
Trigger: AATCAACCCATGTGGTGCAGAATGGTGGCGAACAACTGATGCTCATACTCGTACAGGAGCAACCTTCTTTCCACCATTACTGGGAATTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467184.5
CDS GCA 90 bp AGTCTGCCTTTTCCACATTGCTTTGCGTTGCTGTTGACTGAACGCTaGCCAGTGAATGTTTTCCACTGTTCTGATAAGACAACGTGCACC +
Preference number: 5 (lower is better)
Translates to: SLPFPHCFALLLTER*PVNVFHCSDKTTCT
Trigger: GGTGCACGTTGTCTTATCAGAACAGTGGAAAACATTCACTGGGCAGCGTTCAGTCAACAGCAACGCAAAGCAATGTGGAAAAGGCAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS GCA 90 bp AGCAATATCCTCTTCAATTCCGTCACCATCACCACTAACGGATGGTaGAGGAGCAGGGACAGTAACTGTGCCCACATTATCCAGTTTGAT +
Preference number: 5 (lower is better)
Translates to: SNILFNSVTITTNGW*RSRDSNCAHIIQFD
Trigger: ATCAAACTGGATAATGTGGGCACAGTTACTGTCCCTGCTCCTGCACCATCCGTTAGTGGTGATGGTGACGGAATTGAAGAGGATATTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426648.1
CDS CCA 90 bp ACCACTTGCCTTAGCAATGCAAGCTGGACAAAACCAGTCTCCATCTaGGATTGTTGTAATCTTGGGTCTATGGCAGTAGGTATGACAGCC +
Preference number: 5 (lower is better)
Translates to: TTCLSNASWTKPVSI*DCCNLGSMAVGMTA
Trigger: GGCTGTCATACCTACTGCCATAGACCCAAGATTACAACAATCCCAGATGGAGACTGGTTTTGTCCAGCTTGCATTGCTAAGGCAAGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392782.5
ENST00000392783.7
ENST00000474437.1
ENST00000548440.1
CDS-3UTR CAA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCCCTGGGCTTTTTCAGTaGCTTTCTGTCCATCTGCTT +
Preference number: 5 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRPGLFQ*LSVHLL
Trigger: AAGCAGATGGACAGAAAGCAACTGAAAAAGCCCAGG...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCGTTGTCTATCTGGATTaGGTGGTCTTCCTCTACGAC +
Preference number: 5 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRVVYLD*VVFLYD
Trigger: GTCGTAGAGGAAGACCACCAAATCCAGATAGACAAC...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGCAGCATTGCCAACATTaGGAGGTCGACCTTTCCGAC +
Preference number: 5 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQQHCQH*EVDLSD
Trigger: GTCGGAAAGGTCGACCTCCAAATGTTGGCAATGCTG...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGGCACCAGCATTTGGTTaGGGGGTCATAACCTCTGAC +
Preference number: 5 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQAPAFG*GVITSD
Trigger: GTCAGAGGTTATGACCCCCAAACCAAATGCTGGTGC...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAATGCTTTGCGTTGCTGTaGACTGAACGCTGCCCAGTG +
Preference number: 5 (lower is better)
Translates to: ADKSHKPITEGLGCCRNECFALL*TERCPV
Trigger: CACTGGGCAGCGTTCAGTCAACAGCAACGCAAAGCA...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGCCACATTGCTTTGCGTaGCTGTTGACTGAACGCTGC +
Preference number: 5 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQPHCFA*LLTERC
Trigger: GCAGCGTTCAGTCAACAGCAACGCAAAGCAATGTGG...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCCTGAGATGCAGCACTTaGAGCAAAGCTTTTAGGTCC +
Preference number: 5 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRLRCST*SKAFRS
Trigger: GGACCTAAAAGCTTTGCTCAAAGTGCTGCATCTCAG...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS TCA 90 bp GGAATTCCCAGTAATGGTGGAAAGAAGGTTGCTCCTGTACGAGTATaGGCATCAGTTGTTCGCCACCATTCTGGAAAAGATGCTAGTTGG +
Preference number: 5 (lower is better)
Translates to: GIPSNGGKKVAPVRV*ASVVRHHSGKDASW
Trigger: CCAACTAGCATCTTTTCCAGAATGGTGGCGAACAACTGATGCTCATACTCGTACAGGAGCAACCTTCTTTCCACCATTACTGGGAATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343439.9
ENST00000392782.5
ENST00000482503.5
CDS-3UTR CAA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAACATAAGCATCATGTGTaGTCGCCTTCGCTCTCGTTC +
Preference number: 5 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQHKHHV*SPSLSF
Trigger: GAACGAGAGCGAAGGCGACAACACATGATGCTTATG...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGCATAAGCATCATGTGTaGTCGCCTTCGCTCTCGTTC +
Preference number: 5 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQHKHHV*SPSLSF
Trigger: GAACGAGAGCGAAGGCGACAACACATGATGCTTATG...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCGATAAAGGTTTCACATaGGACACCAATCCCGTAGAC +
Preference number: 5 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRDKGFT*DTNPVD
Trigger: GTCTACGGGATTGGTGTCCAATGTGAAACCTTTATC...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCCTATCCAGCAGCAGATaGAAGCAGGAGATGATTCTT +
Preference number: 5 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRLSSSR*KQEMIL
Trigger: AAGAATCATCTCCTGCTTCAATCTGCTGCTGGATAG...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGCTGCATGCCAGTTCATaGATCAGGAAAGCCAGGACT +
Preference number: 5 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQLHASS*IRKART
Trigger: AGTCCTGGCTTTCCTGATCAATGAACTGGCATGCAG...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAATCACTGACCACACTCTaGCTGCATGCCAGTTCATTG +
Preference number: 5 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQSLTTL*LHASSL
Trigger: CAATGAACTGGCATGCAGCAAGAGTGTGGTCAGTGA...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGCCAGCTCTTCAACACTaGCTGCTTGGTCACCTTCAT +
Preference number: 5 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQPALQH*LLGHLH
Trigger: ATGAAGGTGACCAAGCAGCAAGTGTTGAAGAGCTGG...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGACAACGTGCACCCATTaGCACCAGCATTTGGTTTGG +
Preference number: 5 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQTTCTH*HQHLVW
Trigger: CCAAACCAAATGCTGGTGCAAATGGGTGCACGTTGT...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCAAAAATCTGATCTATTaGCCTCCAACAGGCCACCAC +
Preference number: 5 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRKNLIY*PPTGHH
Trigger: GTGGTGGCCTGTTGGAGGCAAATAGATCAGATTTTT...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAAGAGTATGAGCATCAGTaGTTCGCCACCATTCTGCAC +
Preference number: 5 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQEYEHQ*FATILH
Trigger: GTGCAGAATGGTGGCGAACAACTGATGCTCATACTC...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392783.7
CDS CCA 90 bp TTTCCTGTGTGGAGAAGACAGCATAGCCCCTTTGAAGTTACTGCTTaGATGATTAATGACGATGAAGCAACAACAAAGCCAAGACGGGCA +
Preference number: 5 (lower is better)
Translates to: FPVWRRQHSPFEVTA*MINDDEATTKPRRA
Trigger: TGCCCGTCTTGGCTTTGTTGTTGCTTCATCGTCATTAATCATCCAAGCAGTAACTTCAAAGGGGCTATGCTGTCTTCTCCACACAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485917.1
CDS-3UTR CAA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGATGGTGGAAAGAAGGTaGCTCCTGTACGAGTATGAG +
Preference number: 5 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQMVERR*LLYEYE
Trigger: CTCATACTCGTACAGGAGCAACCTTCTTTCCACCAT...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAACCTGGGCTTTTTCAGTaGCTTTCTGTCCATCTGCTT +
Preference number: 5 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQPGLFQ*LSVHLL
Trigger: AAGCAGATGGACAGAAAGCAACTGAAAAAGCCCAGG...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGGGGTTCTTCTCCCACTaGTACTCAGATTTACAGGTG +
Preference number: 5 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQGFFSH*YSDLQV
Trigger: CACCTGTAAATCTGAGTACAAGTGGGAGAAGAACCC...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGCTTTTTCCTTCCCTaGACTATGCAGGATGGGAGA +
Preference number: 5 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQCFFLP*TMQDGR
Trigger: TCTCCCATCCTGCATAGTCAAGGGAAGGAAAAAGCA...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAATGCTTTTTCCTTCCCTaGACTATGCAGGATGGGAGA +
Preference number: 5 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQCFFLP*TMQDGR
Trigger: TCTCCCATCCTGCATAGTCAAGGGAAGGAAAAAGCA...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAATTCCTCTCTTGCTCGTaGTCTATCTGGATTTGGTGG +
Preference number: 5 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQFLSCS*SIWIWW
Trigger: CCACCAAATCCAGATAGACAACGAGCAAGAGAGGAA...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTCCTGGATTCCTCTCTaGCTCGTTGTCTATCTGGAT +
Preference number: 5 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQSWIPL*LVVYLD
Trigger: ATCCAGATAGACAACGAGCAAGAGAGGAATCCAGGA...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCTCTCAAAAGCTTTATTaGTGCTGCTTGCCTGGCTAT +
Preference number: 5 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRSQKLY*CCLPGY
Trigger: ATAGCCAGGCAAGCAGCACAAATAAAGCTTTTGAGA...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAAGGACAGGTTAAACGGTaGATCCCCAGCTGTTCTGAA +
Preference number: 5 (lower is better)
Translates to: ADKSHKPITEGLGCCRNEGQVKR*IPSCSE
Trigger: TTCAGAACAGCTGGGGATCAACCGTTTAACCTGTCC...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCCTCATGGAAGGGCTTTaGACAGAGGAAGTTGTTTTA +
Preference number: 5 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRLMEGL*TEEVVL
Trigger: TAAAACAACTTCCTCTGTCAAAAGCCCTTCCATGAG...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAAATCATCTTCATCCCCTaGGTCATCACTGTCATCGTC +
Preference number: 5 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQIIFIP*VITVIV
Trigger: GACGATGACAGTGATGACCAAGGGGATGAAGATGAT...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAATTCAACACTTGCTGCTaGGTCACCTTCATCCTCATC +
Preference number: 5 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQFNTCC*VTFILI
Trigger: GATGAGGATGAAGGTGACCAAGCAGCAAGTGTTGAA...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAAACAACGTGCACCCATTaGCACCAGCATTTGGTTTGG +
Preference number: 5 (lower is better)
Translates to: ADKSHKPITEGLGCCRNETTCTH*HQHLVW
Trigger: CCAAACCAAATGCTGGTGCAAATGGGTGCACGTTGT...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAATCTGCCTTTTCCACATaGCTTTGCGTTGCTGTTGAC +
Preference number: 5 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQSAFST*LCVAVD
Trigger: GTCAACAGCAACGCAAAGCAATGTGGAAAAGGCAGA...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAACTGAGATGCAGCACTTaGAGCAAAGCTTTTAGGTCC +
Preference number: 5 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQLRCST*SKAFRS
Trigger: GGACCTAAAAGCTTTGCTCAAAGTGCTGCATCTCAG...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCAAATACTTCCTCATATaGTGGCCAGCTCTGCCTATA +
Preference number: 5 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRKYFLI*WPALPI
Trigger: TATAGGCAGAGCTGGCCACAATATGAGGAAGTATTT...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCTCCTTTGAAAATTCTTaGGGTGTGCTTCCCTGTTCT +
Preference number: 5 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRSFENS*GVLPCS
Trigger: AGAACAGGGAAGCACACCCAAAGAATTTTCAAAGGA...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCATTAGAGCTCTGGTGTaGAGTATTCAGTGCGATTTG +
Preference number: 5 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRIRALV*SIQCDL
Trigger: CAAATCGCACTGAATACTCAACACCAGAGCTCTAAT...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS GCA 90 bp GTTTTCTTAGCAACTTTGCATCTGCGTTATCTAGGAATTCAGCATTaGCAACATTTGGAGGTCGACCTTTCCGACGTCTCATCCTGGATT +
Preference number: 5 (lower is better)
Translates to: VFLATLHLRYLGIQH*QHLEVDLSDVSSWI
Trigger: AATCCAGGATGAGACGTCGGAAAGGTCGACCTCCAAATGTTGGCAATGCTGAATTCCTAGATAACGCAGATGCAAAGTTGCTAAGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343439.9
ENST00000392782.5
ENST00000392783.7
ENST00000472953.1
ENST00000482501.5
CDS-3UTR CAA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAAGAGTATGAGCATCAGTaGTTCGCCACCATTCTGGAA +
Preference number: 5 (lower is better)
Translates to: ADKSHKPITEGLGCCRNEEYEHQ*FATILE
Trigger: TTCCAGAATGGTGGCGAACAACTGATGCTCATACTC...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392782.5
CDS-3UTR CAA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAAATGGTGGAAAGAAGGTaGCTCCTGTACGAGTATGAG +
Preference number: 5 (lower is better)
Translates to: ADKSHKPITEGLGCCRNEMVERR*LLYEYE
Trigger: CTCATACTCGTACAGGAGCAACCTTCTTTCCACCAT...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCGAATCACTATCACTGTaGCTAGAACTTTCCATTGCT +
Preference number: 5 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRESLSL*LELSIA
Trigger: AGCAATGGAAAGTTCTAGCAACAGTGATAGTGATTC...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTCACAGATTCCTCCTTaGCCTGAGAGCTTTGGAAAA +
Preference number: 5 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQSQIPP*PESFGK
Trigger: TTTTCCAAAGCTCTCAGGCAAAGGAGGAATCTGTGA...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCTTATATTGTTCCCGTTaGGATCTCAATTCACTGGTC +
Preference number: 5 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRLYCSR*DLNSLV
Trigger: GACCAGTGAATTGAGATCCAAACGGGAACAATATAA...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAATCTAGGAATTCAGCATaGCCAACATTTGGAGGTCGA +
Preference number: 5 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQSRNSA*PTFGGR
Trigger: TCGACCTCCAAATGTTGGCAATGCTGAATTCCTAGA...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAACTTTATTTGTGCTGCTaGCCTGGCTATTTCTTGAGC +
Preference number: 5 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQLYLCC*PGYFLS
Trigger: GCTCAAGAAATAGCCAGGCAAGCAGCACAAATAAAG...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGCTTGTGACATCACTGTaGGGAAACCTTTACTCTCGA +
Preference number: 5 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQLVTSL*GNLYSR
Trigger: TCGAGAGTAAAGGTTTCCCAACAGTGATGTCACAAG...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTGGACAGGTTAAACGGTaGATCCCCAGCTGTTCTGAA +
Preference number: 5 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCGQVKR*IPSCSE
Trigger: TTCAGAACAGCTGGGGATCAACCGTTTAACCTGTCC...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCAGAGCTGTTTTAGCCTaGTATCCTGTTATTAGACCT +
Preference number: 5 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRRAVLA*YPVIRP
Trigger: AGGTCTAATAACAGGATACAAGGCTAAAACAGCTCT...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAATTCAGTAAGCTCAGTTaGTCCACAGTGGGCTTCCAT +
Preference number: 5 (lower is better)
Translates to: ADKSHKPITEGLGCCRNEFSKLS*STVGFH
Trigger: ATGGAAGCCCACTGTGGACAAACTGAGCTTACTGAA...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAAATCATCTTCATCCCCTaGGTCATCACTGTCATCGTC +
Preference number: 5 (lower is better)
Translates to: ADKSHKPITEGLGCCRNEIIFIP*VITVIV
Trigger: GACGATGACAGTGATGACCAAGGGGATGAAGATGAT...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCTCAAACATTTCTTCTTaGATCTGGACACTTTCTGCC +
Preference number: 5 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRSNISS*IWTLSA
Trigger: GGCAGAAAGTGTCCAGATCAAAGAAGAAATGTTTGA...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAATCTGCCTTTTCCACATaGCTTTGCGTTGCTGTTGAC +
Preference number: 5 (lower is better)
Translates to: ADKSHKPITEGLGCCRNESAFST*LCVAVD
Trigger: GTCAACAGCAACGCAAAGCAATGTGGAAAAGGCAGA...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGCCTTCACTTGCAAACTaGCTGATGCAACTCTCCTTT +
Preference number: 5 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQPSLAN*LMQLSF
Trigger: AAAGGAGAGTTGCATCAGCAAGTTTGCAAGTGAAGG...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAAGCTATATCTAGGGGGTaGTCACTCTTCCGTTCTAGT +
Preference number: 5 (lower is better)
Translates to: ADKSHKPITEGLGCCRNEAISRG*SLFRSS
Trigger: ACTAGAACGGAAGAGTGACAACCCCCTAGATATAGC...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGCAAAGAGCTAGGTCCTaGGAGTCATCTCTTTTAGGT +
Preference number: 5 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQQRARS*ESSLLG
Trigger: ACCTAAAAGAGATGACTCCAAGGACCTAGCTCTTTG...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAAGGAGACGCCACAGTGTaGGTAGAGGATAATTACTGT +
Preference number: 5 (lower is better)
Translates to: ADKSHKPITEGLGCCRNEGDATV*VEDNYC
Trigger: ACAGTAATTATCCTCTACCAACACTGTGGCGTCTCC...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAAAAAAATCTGATCTATTaGCCTCCAACAGGCCACCAC +
Preference number: 5 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQKNLIY*PPTGHH
Trigger: GTGGTGGCCTGTTGGAGGCAAATAGATCAGATTTTT...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
44% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS CCA 90 bp ACCATTGTCTATTCTTTTCAGTCAGCGTTTTTAGTAACTGGTCATTaGGGAGAGGACTGTAGAACTTCCCTGGACCACTTGAACCAGTAT +
Preference number: 5 (lower is better)
Translates to: TIVYSFQSAFLVTGH*GEDCRTSLDHLNQY
Trigger: ATACTGGTTCAAGTGGTCCAGGGAAGTTCTACAGTCCTCTCCCCAATGACCAGTTACTAAAAACGCTGACTGAAAAGAATAGACAATGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCTTTTTCCCGAAGTCCTaGAATGGAATGAAGAAGAAT +
Preference number: 5 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRFFPKS*NGMKKN
Trigger: ATTCTTCTTCATTCCATTCAAGGACTTCGGGAAAAA...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAATCTGTCCATCTGCTTTaGGGTCTGAAATACCATGTA +
Preference number: 5 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQSVHLL*GLKYHV
Trigger: TACATGGTATTTCAGACCCAAAAGCAGATGGACAGA...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGGCACTGAAGCTGAAATaGTCCCTTGAGATATCCATT +
Preference number: 5 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQALKLK*SLEISI
Trigger: AATGGATATCTCAAGGGACAATTTCAGCTTCAGTGC...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392783.7
CDS-3UTR CAA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTGTTGTCTATCTGGATTaGGTGGTCTTCCTCTACGAC +
Preference number: 5 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCVVYLD*VVFLYD
Trigger: GTCGTAGAGGAAGACCACCAAATCCAGATAGACAAC...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAACTATCCAGCAGCAGATaGAAGCAGGAGATGATTCTT +
Preference number: 5 (lower is better)
Translates to: ADKSHKPITEGLGCCRNELSSSR*KQEMIL
Trigger: AAGAATCATCTCCTGCTTCAATCTGCTGCTGGATAG...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAACTTGTGACATCACTGTaGGGAAACCTTTACTCTCGA +
Preference number: 5 (lower is better)
Translates to: ADKSHKPITEGLGCCRNELVTSL*GNLYSR
Trigger: TCGAGAGTAAAGGTTTCCCAACAGTGATGTCACAAG...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTTGGAAAGGCCACCTTTaGAAACTACTGAAGCCACAG +
Preference number: 5 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCWKGHL*KLLKPQ
Trigger: CTGTGGCTTCAGTAGTTTCAAAAGGTGGCCTTTCCA...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAACTCATGGAAGGGCTTTaGACAGAGGAAGTTGTTTTA +
Preference number: 5 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQLMEGL*TEEVVL
Trigger: TAAAACAACTTCCTCTGTCAAAAGCCCTTCCATGAG...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTGTTACTCTTCTTCTTTaGGAAGTGCCAGAGTGTGGG +
Preference number: 5 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCVTLLL*EVPECG
Trigger: CCCACACTCTGGCACTTCCAAAAGAAGAAGAGTAAC...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTTTCAGTAAGCTCAGTTaGTCCACAGTGGGCTTCCAT +
Preference number: 5 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCFSKLS*STVGFH
Trigger: ATGGAAGCCCACTGTGGACAAACTGAGCTTACTGAA...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCCACAGTGATCTGTATTaGAACAATTTAAACTGTCCC +
Preference number: 5 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRHSDLY*NNLNCP
Trigger: GGGACAGTTTAAATTGTTCAAATACAGATCACTGTG...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp AATATCCCCTACACCCTGTTTCAAAGGCAGGCACTACCAAGATTAAGGAGACGCAAAAGCTTGCTTAATTaGGAAAAAGAGCCAGGTTTC +
Preference number: 5 (lower is better)
Translates to: NIPYTLFQRQALPRLRRRKSLLN*EKEPGF
Trigger: GAAACCTGGCTCTTTTTCCAAATTAAGCAAGCTTTT...GCGTCTCCTTAATCTTGGTAGTGCCTGCCTTTGAAACAGGGTGTAGGGGATATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAATCCTTTGAAAATTCTTaGGGTGTGCTTCCCTGTTCT +
Preference number: 5 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQSFENS*GVLPCS
Trigger: AGAACAGGGAAGCACACCCAAAGAATTTTCAAAGGA...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGATTAGAGCTCTGGTGTaGAGTATTCAGTGCGATTTG +
Preference number: 5 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQIRALV*SIQCDL
Trigger: CAAATCGCACTGAATACTCAACACCAGAGCTCTAAT...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS TCA 90 bp CAAAGCCCAAAACTTTACCAAAGTTTCGTAAGAACTGCACCACCATaGGACAGTCTGAAAATGTACTTCCAGAGAGAACAAGTCCTGGAA +
Preference number: 5 (lower is better)
Translates to: QSPKLYQSFVRTAPP*DSLKMYFQREQVLE
Trigger: TTCCAGGACTTGTTCTCTCTGGAAGTACATTTTCAGACTGTCTCATGGTGGTGCAGTTCTTACGAAACTTTGGTAAAGTTTTGGGCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294905.4
ENST00000392782.5
ENST00000392783.7
ENST00000485917.1
ENST00000551504.5
CDS TCA 90 bp TCTTGTACTTCACCCATGCTGTCCCCTATATTTAGCAATCCCTCTTaGAGAACACTCAGGTTTGGAACATCAATATTCACATCAAAGCCC +
Preference number: 5 (lower is better)
Translates to: SCTSPMLSPIFSNPS*RTLRFGTSIFTSKP
Trigger: GGGCTTTGATGTGAATATTGATGTTCCAAACCTGAGTGTTCTTCAAGAGGGATTGCTAAATATAGGGGACAGCATGGGTGAAGTACAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294905.4
ENST00000392782.5
ENST00000392783.7
ENST00000485917.1
ENST00000551504.5
CDS TCA 90 bp GCCATACACATCTATGTATCTTTCGTTACACAGATATGGACCACATaGCGGGTGAGCAGTTCTATTGGGGTAAATGCACATTTCAAGTAC +
Preference number: 5 (lower is better)
Translates to: AIHIYVSFVTQIWTT*RVSSSIGVNAHFKY
Trigger: GTACTTGAAATGTGCATTTACCCCAATAGAACTGCTCACCCGTCATGTGGTCCATATCTGTGTAACGAAAGATACATAGATGTGTATGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548440.1
CDS CCA 90 bp GAGATACTTTATTACTTCAGGGTACTGCCTAAGTTTCTTTCCACATaGAGCATAATATGCTACTTCTCCTTGAAGGCGCCCTCCAAAGTT +
Preference number: 5 (lower is better)
Translates to: EILYYFRVLPKFLST*SIICYFSLKAPSKV
Trigger: AACTTTGGAGGGCGCCTTCAAGGAGAAGTAGCATATTATGCTCCATGTGGAAAGAAACTTAGGCAGTACCCTGAAGTAATAAAGTATCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343439.9
ENST00000392783.7
ENST00000441143.1
ENST00000472953.1
CDS-3UTR CAA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGCCAATAATTTGGCATTaGCCGCTTCTTCCTTCTTTT +
Preference number: 5 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQPIIWH*PLLPSF
Trigger: AAAAGAAGGAAGAAGCGGCAAATGCCAAATTATTGG...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAAGAATCACTATCACTGTaGCTAGAACTTTCCATTGCT +
Preference number: 5 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQESLSL*LELSIA
Trigger: AGCAATGGAAAGTTCTAGCAACAGTGATAGTGATTC...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAATCTGTCCATCTGCTTTaGGGTCTGAAATACCATGTA +
Preference number: 5 (lower is better)
Translates to: ADKSHKPITEGLGCCRNESVHLL*GLKYHV
Trigger: TACATGGTATTTCAGACCCAAAAGCAGATGGACAGA...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTTCACAGATTCCTCCTTaGCCTGAGAGCTTTGGAAAA +
Preference number: 5 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCSQIPP*PESFGK
Trigger: TTTTCCAAAGCTCTCAGGCAAAGGAGGAATCTGTGA...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGATTACACTGGTGTGTTaGTTCACAGATTCCTCCTTT +
Preference number: 5 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQITLVC*FTDSSF
Trigger: AAAGGAGGAATCTGTGAACAAACACACCAGTGTAAT...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTGATAAAGGTTTCACATaGGACACCAATCCCGTAGAC +
Preference number: 5 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCDKGFT*DTNPVD
Trigger: GTCTACGGGATTGGTGTCCAATGTGAAACCTTTATC...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGCTCTGCATTTTAGTTTaGGTAGTAAGTGCTAGAGGA +
Preference number: 5 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQLCILV*VVSARG
Trigger: TCCTCTAGCACTTACTACCAAAACTAAAATGCAGAG...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAACTCTGCATTTTAGTTTaGGTAGTAAGTGCTAGAGGA +
Preference number: 5 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQLCILV*VVSARG
Trigger: TCCTCTAGCACTTACTACCAAAACTAAAATGCAGAG...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTTCTAGGAATTCAGCATaGCCAACATTTGGAGGTCGA +
Preference number: 5 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCSRNSA*PTFGGR
Trigger: TCGACCTCCAAATGTTGGCAATGCTGAATTCCTAGA...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAAGTTTTCTTAGCAACTTaGCATCTGCGTTATCTAGGA +
Preference number: 5 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQVFLAT*HLRYLG
Trigger: TCCTAGATAACGCAGATGCAAAGTTGCTAAGAAAAC...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTCTTTATCTGTTCTTTTaGCTTCCGCTTCTCCTCAGC +
Preference number: 5 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCLYLFF*LPLLLS
Trigger: GCTGAGGAGAAGCGGAAGCAAAAAGAACAGATAAAG...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAAGATTCTTCTCAAGGTTaGTTCAGCAGCTTCACTTCT +
Preference number: 5 (lower is better)
Translates to: ADKSHKPITEGLGCCRNEDSSQG*FSSFTS
Trigger: AGAAGTGAAGCTGCTGAACAAACCTTGAGAAGAATC...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGAAATGTCCACATGGGTaGATTGTAGAGCTAAGTGAA +
Preference number: 5 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQKCPHG*IVELSE
Trigger: TTCACTTAGCTCTACAATCAACCCATGTGGACATTT...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp CTGTATAGCTATCATTACCTTCAGACGAAAATAAAATGCTACAATCCTCTAAGGGCACCAGCATTTGGTTaGGGGGTCATAACCTCTGAC +
Preference number: 5 (lower is better)
Translates to: LYSYHYLQTKIKCYNPLRAPAFG*GVITSD
Trigger: GTCAGAGGTTATGACCCCCAAACCAAATGCTGGTGC...CCTTAGAGGATTGTAGCATTTTATTTTCGTCTGAAGGTAATGATAGCTATACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp CTGTATAGCTATCATTACCTTCAGACGAAAATAAAATGCTACAATCCTCTAAGGCCACATTGCTTTGCGTaGCTGTTGACTGAACGCTGC +
Preference number: 5 (lower is better)
Translates to: LYSYHYLQTKIKCYNPLRPHCFA*LLTERC
Trigger: GCAGCGTTCAGTCAACAGCAACGCAAAGCAATGTGG...CCTTAGAGGATTGTAGCATTTTATTTTCGTCTGAAGGTAATGATAGCTATACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTCAAAGAGCTAGGTCCTaGGAGTCATCTCTTTTAGGT +
Preference number: 5 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCQRARS*ESSLLG
Trigger: ACCTAAAAGAGATGACTCCAAGGACCTAGCTCTTTG...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAACATTGCTGGTCTCATTaGTCCTTGTTTAGAAGGAAA +
Preference number: 5 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQHCWSH*SLFRRK
Trigger: TTTCCTTCTAAACAAGGACAAATGAGACCAGCAATG...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS TCA 90 bp TGCAAACTTGCTGATGCAACTCTCCTTTCTAGATCTTCTACCTGTTaGAGGACACTCAAATCCATTTCCATTGCTTGTTCTTCTACTGAC +
Preference number: 5 (lower is better)
Translates to: CKLADATLLSRSSTC*RTLKSISIACSSTD
Trigger: GTCAGTAGAAGAACAAGCAATGGAAATGGATTTGAGTGTCCTTCAACAGGTAGAAGATCTAGAAAGGAGAGTTGCATCAGCAAGTTTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392782.5
ENST00000392783.7
ENST00000426648.1
ENST00000474437.1
CDS-3UTR CAA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAACCAATAATTTGGCATTaGCCGCTTCTTCCTTCTTTT +
Preference number: 5 (lower is better)
Translates to: ADKSHKPITEGLGCCRNEPIIWH*PLLPSF
Trigger: AAAAGAAGGAAGAAGCGGCAAATGCCAAATTATTGG...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAACAGAAGAACAGCTTGTaGTCTTCTCATTTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQQKNSL*SSHFFF
Trigger: GAAAAAGAAATGAGAAGACAACAAGCTGTTCTTCTG...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGCAGAAGAACAGCTTGTaGTCTTCTCATTTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQQKNSL*SSHFFF
Trigger: GAAAAAGAAATGAGAAGACAACAAGCTGTTCTTCTG...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAACTCATCACGTTTTTCTaGTTTCAACCGCTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: ADKSHKPITEGLGCCRNELITFF*FQPLFF
Trigger: GAAAAAGAGCGGTTGAAACAAGAAAAACGTGATGAG...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTTTTTCCCGAAGTCCTaGAATGGAATGAAGAAGAAT +
Preference number: 5 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQFFPKS*NGMKKN
Trigger: ATTCTTCTTCATTCCATTCAAGGACTTCGGGAAAAA...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAATGTAATAGCACCTGGTaGTTACTTTTATGTTGTGCT +
Preference number: 5 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQCNSTW*LLLCCA
Trigger: AGCACAACATAAAAGTAACAACCAGGTGCTATTACA...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTTGTCAAGAATGGATTaGGGTGGTTGTTTTCTAATG +
Preference number: 5 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQLSRMD*GGCFLM
Trigger: CATTAGAAAACAACCACCCAAATCCATTCTTGACAA...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAATACCTAAAAGTGCATTaGTCAAGAATGGATTTGGGT +
Preference number: 5 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQYLKVH*SRMDLG
Trigger: ACCCAAATCCATTCTTGACAAATGCACTTTTAGGTA...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAAGTTTTCTTAGCAACTTaGCATCTGCGTTATCTAGGA +
Preference number: 5 (lower is better)
Translates to: ADKSHKPITEGLGCCRNEVFLAT*HLRYLG
Trigger: TCCTAGATAACGCAGATGCAAAGTTGCTAAGAAAAC...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAAAAATGTCCACATGGGTaGATTGTAGAGCTAAGTGAA +
Preference number: 5 (lower is better)
Translates to: ADKSHKPITEGLGCCRNEKCPHG*IVELSE
Trigger: TTCACTTAGCTCTACAATCAACCCATGTGGACATTT...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAAAGAGCTGTTTTAGCCTaGTATCCTGTTATTAGACCT +
Preference number: 5 (lower is better)
Translates to: ADKSHKPITEGLGCCRNERAVLA*YPVIRP
Trigger: AGGTCTAATAACAGGATACAAGGCTAAAACAGCTCT...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp CTGTATAGCTATCATTACCTTCAGACGAAAATAAAATGCTACAATCCTCTAAGGCTGCATGCCAGTTCATaGATCAGGAAAGCCAGGACT +
Preference number: 5 (lower is better)
Translates to: LYSYHYLQTKIKCYNPLRLHASS*IRKART
Trigger: AGTCCTGGCTTTCCTGATCAATGAACTGGCATGCAG...CCTTAGAGGATTGTAGCATTTTATTTTCGTCTGAAGGTAATGATAGCTATACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp CTGTATAGCTATCATTACCTTCAGACGAAAATAAAATGCTACAATCCTCTAAGGTCACTGACCACACTCTaGCTGCATGCCAGTTCATTG +
Preference number: 5 (lower is better)
Translates to: LYSYHYLQTKIKCYNPLRSLTTL*LHASSL
Trigger: CAATGAACTGGCATGCAGCAAGAGTGTGGTCAGTGA...CCTTAGAGGATTGTAGCATTTTATTTTCGTCTGAAGGTAATGATAGCTATACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp CTGTATAGCTATCATTACCTTCAGACGAAAATAAAATGCTACAATCCTCTAAGGCCAGCTCTTCAACACTaGCTGCTTGGTCACCTTCAT +
Preference number: 5 (lower is better)
Translates to: LYSYHYLQTKIKCYNPLRPALQH*LLGHLH
Trigger: ATGAAGGTGACCAAGCAGCAAGTGTTGAAGAGCTGG...CCTTAGAGGATTGTAGCATTTTATTTTCGTCTGAAGGTAATGATAGCTATACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGAAAAGCTTGCTTAATTaGGAAAAAGAGCCAGGTTTC +
Preference number: 5 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQKSLLN*EKEPGF
Trigger: GAAACCTGGCTCTTTTTCCAAATTAAGCAAGCTTTT...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp TTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGGTTACAAATTCTTGAGGCAGGCTaGAGTAATATAATCCAAATG +
Preference number: 5 (lower is better)
Translates to: FASNRPPQHTVDKTQWLQILEAG*SNIIQM
Trigger: CATTTGGATTATATTACTCAAGCCTGCCTCAAGAAT...TTGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTCTCCATCATGCTCCTaGCACAATTTAGTAAATGAT +
Preference number: 5 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQSPSCS*HNLVND
Trigger: ATCATTTACTAAATTGTGCAAGGAGCATGATGGAGA...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTCCCTTTCGACAGATTaGGCAGTAAACTTTCATAAT +
Preference number: 5 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQSLSTD*AVNFHN
Trigger: ATTATGAAAGTTTACTGCCAAATCTGTCGAAAGGGA...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTAAATACTTCCTCATATaGTGGCCAGCTCTGCCTATA +
Preference number: 5 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCKYFLI*WPALPI
Trigger: TATAGGCAGAGCTGGCCACAATATGAGGAAGTATTT...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp TCTGATCTATTTGCCTCCAACAGGCCACCACAACACACAGTAGATAAAACACAGTGTGTGCGTAGGAAATaGTCACAATTTTATTCCACA +
Preference number: 5 (lower is better)
Translates to: SDLFASNRPPQHTVDKTQCVRRK*SQFYST
Trigger: TGTGGAATAAAATTGTGACAATTTCCTACGCACACA...CTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGCAAATAGATCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS TCA 90 bp AATCTTCAGAATCTTTACTACTGGGAATGTCTGAATCTGTTCCTCTaGATTGTTCCACTAAAGATTTTGCAGGATGGGAGTGATGCTGTG +
Preference number: 5 (lower is better)
Translates to: NLQNLYYWECLNLFL*IVPLKILQDGSDAV
Trigger: CACAGCATCACTCCCATCCTGCAAAATCTTTAGTGGAACAATTCAGAGGAACAGATTCAGACATTCCCAGTAGTAAAGATTCTGAAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343439.9
ENST00000392782.5
ENST00000392783.7
ENST00000441143.1
ENST00000472953.1
CDS TCA 90 bp CTTGCGGAGTTTACCTTCTACCACCCATTTATCTCTCCTCAAGTTTaGCATATAATCAATGTTCTTGTCGATTTCACTGACCACACTCTT +
Preference number: 5 (lower is better)
Translates to: LAEFTFYHPFISPQV*HIINVLVDFTDHTL
Trigger: AAGAGTGTGGTCAGTGAAATCGACAAGAACATTGATTATATGTCAAACTTGAGGAGAGATAAATGGGTGGTAGAAGGTAAACTCCGCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS CCA 90 bp AAAGCTTTGGTCTTCAGACTTTCAGTAAGCTCAGTTTGTCCACAGTaGGCTTCCATAAATATCTGTAAAATCTCGGAAACATTGTCTCGA +
Preference number: 5 (lower is better)
Translates to: KALVFRLSVSSVCPQ*ASINICKISETLSR
Trigger: TCGAGACAATGTTTCCGAGATTTTACAGATATTTATGGAAGCCCACTGTGGACAAACTGAGCTTACTGAAAGTCTGAAGACCAAAGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392782.5
ENST00000392783.7
ENST00000551504.5
CDS-3UTR CAA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTCTCATCACGTTTTTCTaGTTTCAACCGCTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCLITFF*FQPLFF
Trigger: GAAAAAGAGCGGTTGAAACAAGAAAAACGTGATGAG...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTGAATGCCTGTTTATATaGTTCCCGTTTGGATCTCAA +
Preference number: 5 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCECLFI*FPFGSQ
Trigger: TTGAGATCCAAACGGGAACAATATAAACAGGCATTC...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp CTGTATAGCTATCATTACCTTCAGACGAAAATAAAATGCTACAATCCTCTAAGGGGGTTCTTCTCCCACTaGTACTCAGATTTACAGGTG +
Preference number: 5 (lower is better)
Translates to: LYSYHYLQTKIKCYNPLRGFFSH*YSDLQV
Trigger: CACCTGTAAATCTGAGTACAAGTGGGAGAAGAACCC...CCTTAGAGGATTGTAGCATTTTATTTTCGTCTGAAGGTAATGATAGCTATACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAAACTGGGTTTACATTATaGCTAACTGCTTTTTCCTTC +
Preference number: 5 (lower is better)
Translates to: ADKSHKPITEGLGCCRNETGFTL*LTAFSF
Trigger: GAAGGAAAAAGCAGTTAGCAATAATGTAAACCCAGT...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp CTGTATAGCTATCATTACCTTCAGACGAAAATAAAATGCTACAATCCTCTAAGGTTCCTCTCTTGCTCGTaGTCTATCTGGATTTGGTGG +
Preference number: 5 (lower is better)
Translates to: LYSYHYLQTKIKCYNPLRFLSCS*SIWIWW
Trigger: CCACCAAATCCAGATAGACAACGAGCAAGAGAGGAA...CCTTAGAGGATTGTAGCATTTTATTTTCGTCTGAAGGTAATGATAGCTATACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp CTGTATAGCTATCATTACCTTCAGACGAAAATAAAATGCTACAATCCTCTAAGGTCCTGGATTCCTCTCTaGCTCGTTGTCTATCTGGAT +
Preference number: 5 (lower is better)
Translates to: LYSYHYLQTKIKCYNPLRSWIPL*LVVYLD
Trigger: ATCCAGATAGACAACGAGCAAGAGAGGAATCCAGGA...CCTTAGAGGATTGTAGCATTTTATTTTCGTCTGAAGGTAATGATAGCTATACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp GCTGATAAATCACACAAACCAATAACCGAGGGCCTTGGTTGTTGTAGGAATGAAATTCTTGAGGCAGGCTaGAGTAATATAATCCAAATG +
Preference number: 5 (lower is better)
Translates to: ADKSHKPITEGLGCCRNEILEAG*SNIIQM
Trigger: CATTTGGATTATATTACTCAAGCCTGCCTCAAGAAT...TTCATTCCTACAACAACCAAGGCCCTCGGTTATTGGTTTGTGTGATTTATCAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp CTGTATAGCTATCATTACCTTCAGACGAAAATAAAATGCTACAATCCTCTAAGGGCTATATCTAGGGGGTaGTCACTCTTCCGTTCTAGT +
Preference number: 5 (lower is better)
Translates to: LYSYHYLQTKIKCYNPLRAISRG*SLFRSS
Trigger: ACTAGAACGGAAGAGTGACAACCCCCTAGATATAGC...CCTTAGAGGATTGTAGCATTTTATTTTCGTCTGAAGGTAATGATAGCTATACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTCAAAGGTTTCAAGGTTaGGATACTGTCCACTACTTA +
Preference number: 5 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCQRFQG*DTVHYL
Trigger: TAAGTAGTGGACAGTATCCAAACCTTGAAACCTTTG...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTATAACACCCTTTCCTTaGAAAATTCTTTGGGTGTGC +
Preference number: 5 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCITPFP*KILWVC
Trigger: GCACACCCAAAGAATTTTCAAAGGAAAGGGTGTTAT...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTGAAGAACACTCAGGTTaGGAACATCAATATTCACAT +
Preference number: 5 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCEEHSG*EHQYSH
Trigger: ATGTGAATATTGATGTTCCAAACCTGAGTGTTCTTC...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTTTGTCAAGAATGGATTaGGGTGGTTGTTTTCTAATG +
Preference number: 5 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCLSRMD*GGCFLM
Trigger: CATTAGAAAACAACCACCCAAATCCATTCTTGACAA...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp CTGTATAGCTATCATTACCTTCAGACGAAAATAAAATGCTACAATCCTCTAAGGCTTTATTTGTGCTGCTaGCCTGGCTATTTCTTGAGC +
Preference number: 5 (lower is better)
Translates to: LYSYHYLQTKIKCYNPLRLYLCC*PGYFLS
Trigger: GCTCAAGAAATAGCCAGGCAAGCAGCACAAATAAAG...CCTTAGAGGATTGTAGCATTTTATTTTCGTCTGAAGGTAATGATAGCTATACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp CTGTATAGCTATCATTACCTTCAGACGAAAATAAAATGCTACAATCCTCTAAGGCTTTATCTGTTCTTTTaGCTTCCGCTTCTCCTCAGC +
Preference number: 5 (lower is better)
Translates to: LYSYHYLQTKIKCYNPLRLYLFF*LPLLLS
Trigger: GCTGAGGAGAAGCGGAAGCAAAAAGAACAGATAAAG...CCTTAGAGGATTGTAGCATTTTATTTTCGTCTGAAGGTAATGATAGCTATACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTCACAGTGATCTGTATTaGAACAATTTAAACTGTCCC +
Preference number: 5 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCHSDLY*NNLNCP
Trigger: GGGACAGTTTAAATTGTTCAAATACAGATCACTGTG...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp CTGTATAGCTATCATTACCTTCAGACGAAAATAAAATGCTACAATCCTCTAAGGCCTTCACTTGCAAACTaGCTGATGCAACTCTCCTTT +
Preference number: 5 (lower is better)
Translates to: LYSYHYLQTKIKCYNPLRPSLAN*LMQLSF
Trigger: AAAGGAGAGTTGCATCAGCAAGTTTGCAAGTGAAGG...CCTTAGAGGATTGTAGCATTTTATTTTCGTCTGAAGGTAATGATAGCTATACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp GCCTTGCACGTTTATGTAAATACAGTTCACATTGCTGGTCTCATTTGTCCTTGTTCCCTTTCGACAGATTaGGCAGTAAACTTTCATAAT +
Preference number: 5 (lower is better)
Translates to: ALHVYVNTVHIAGLICPCSLSTD*AVNFHN
Trigger: ATTATGAAAGTTTACTGCCAAATCTGTCGAAAGGGA...ACAAGGACAAATGAGACCAGCAATGTGAACTGTATTTACATAAACGTGCAAGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp CTGTATAGCTATCATTACCTTCAGACGAAAATAAAATGCTACAATCCTCTAAGGGATTCTTCTCAAGGTTaGTTCAGCAGCTTCACTTCT +
Preference number: 5 (lower is better)
Translates to: LYSYHYLQTKIKCYNPLRDSSQG*FSSFTS
Trigger: AGAAGTGAAGCTGCTGAACAAACCTTGAGAAGAATC...CCTTAGAGGATTGTAGCATTTTATTTTCGTCTGAAGGTAATGATAGCTATACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS GCA 90 bp CTGGTGGAAATGGACATTCAACATTCTGTGGGATCTACTTTAGTGTaGCTTTGCACAGTAATATTCCCGAGTAAACAATTTAGAAAAATA +
Preference number: 5 (lower is better)
Translates to: LVEMDIQHSVGSTLV*LCTVIFPSKQFRKI
Trigger: TATTTTTCTAAATTGTTTACTCGGGAATATTACTGTGCAAAGGCACACTAAAGTAGATCCCACAGAATGTTGAATGTCCATTTCCACCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472953.1
CDS CCA 90 bp ATCTACCTAACACAACCTCTCTCTCTCTCAGTTACTCACAAAACATaGCTGTCTTATTCAGAGATTAGCAATTATTGTAATGAGATACTG +
Preference number: 5 (lower is better)
Translates to: IYLTQPLSLSVTHKT*LSYSEISNYCNEIL
Trigger: CAGTATCTCATTACAATAATTGCTAATCTCTGAATAAGACAGCCATGTTTTGTGAGTAACTGAGAGAGAGAGAGGTTGTGTTAGGTAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482503.5
CDS CCA 90 bp ACCTATTGCTCAAGAAGTATTCCTGAATCTCCAGACAGTTATATTTaGGGCCTCTTTTCATTGTTCATGATAGATTATTGGCAATTTGTC +
Preference number: 5 (lower is better)
Translates to: TYCSRSIPESPDSYI*GLFSLFMIDYWQFV
Trigger: GACAAATTGCCAATAATCTATCATGAACAATGAAAAGAGGCCCCAAATATAACTGTCTGGAGATTCAGGAATACTTCTTGAGCAATAGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483316.1
CDS-3UTR CAA 90 bp CTGTATAGCTATCATTACCTTCAGACGAAAATAAAATGCTACAATCCTCTAAGGATTACACTGGTGTGTTaGTTCACAGATTCCTCCTTT +
Preference number: 5 (lower is better)
Translates to: LYSYHYLQTKIKCYNPLRITLVC*FTDSSF
Trigger: AAAGGAGGAATCTGTGAACAAACACACCAGTGTAAT...CCTTAGAGGATTGTAGCATTTTATTTTCGTCTGAAGGTAATGATAGCTATACAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp CTGTATAGCTATCATTACCTTCAGACGAAAATAAAATGCTACAATCCTCTAAGGTCAAACATTTCTTCTTaGATCTGGACACTTTCTGCC +
Preference number: 5 (lower is better)
Translates to: LYSYHYLQTKIKCYNPLRSNISS*IWTLSA
Trigger: GGCAGAAAGTGTCCAGATCAAAGAAGAAATGTTTGA...CCTTAGAGGATTGTAGCATTTTATTTTCGTCTGAAGGTAATGATAGCTATACAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp CTGTATAGCTATCATTACCTTCAGACGAAAATAAAATGCTACAATCCTCTAAGGCAAAGGTTTCAAGGTTaGGATACTGTCCACTACTTA +
Preference number: 5 (lower is better)
Translates to: LYSYHYLQTKIKCYNPLRQRFQG*DTVHYL
Trigger: TAAGTAGTGGACAGTATCCAAACCTTGAAACCTTTG...CCTTAGAGGATTGTAGCATTTTATTTTCGTCTGAAGGTAATGATAGCTATACAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp CTGTATAGCTATCATTACCTTCAGACGAAAATAAAATGCTACAATCCTCTAAGGCATTGCTGGTCTCATTaGTCCTTGTTTAGAAGGAAA +
Preference number: 5 (lower is better)
Translates to: LYSYHYLQTKIKCYNPLRHCWSH*SLFRRK
Trigger: TTTCCTTCTAAACAAGGACAAATGAGACCAGCAATG...CCTTAGAGGATTGTAGCATTTTATTTTCGTCTGAAGGTAATGATAGCTATACAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp CTGTATAGCTATCATTACCTTCAGACGAAAATAAAATGCTACAATCCTCTAAGGGAAGAACACTCAGGTTaGGAACATCAATATTCACAT +
Preference number: 5 (lower is better)
Translates to: LYSYHYLQTKIKCYNPLREEHSG*EHQYSH
Trigger: ATGTGAATATTGATGTTCCAAACCTGAGTGTTCTTC...CCTTAGAGGATTGTAGCATTTTATTTTCGTCTGAAGGTAATGATAGCTATACAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp CTGTATAGCTATCATTACCTTCAGACGAAAATAAAATGCTACAATCCTCTAAGGTGTAATAGCACCTGGTaGTTACTTTTATGTTGTGCT +
Preference number: 5 (lower is better)
Translates to: LYSYHYLQTKIKCYNPLRCNSTW*LLLCCA
Trigger: AGCACAACATAAAAGTAACAACCAGGTGCTATTACA...CCTTAGAGGATTGTAGCATTTTATTTTCGTCTGAAGGTAATGATAGCTATACAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp CTGTATAGCTATCATTACCTTCAGACGAAAATAAAATGCTACAATCCTCTAAGGACTGGGTTTACATTATaGCTAACTGCTTTTTCCTTC +
Preference number: 5 (lower is better)
Translates to: LYSYHYLQTKIKCYNPLRTGFTL*LTAFSF
Trigger: GAAGGAAAAAGCAGTTAGCAATAATGTAAACCCAGT...CCTTAGAGGATTGTAGCATTTTATTTTCGTCTGAAGGTAATGATAGCTATACAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS-3UTR CAA 90 bp CTGTATAGCTATCATTACCTTCAGACGAAAATAAAATGCTACAATCCTCTAAGGTGTGTGCGTAGGAAATaGTCACAATTTTATTCCACA +
Preference number: 5 (lower is better)
Translates to: LYSYHYLQTKIKCYNPLRCVRRK*SQFYST
Trigger: TGTGGAATAAAATTGTGACAATTTCCTACGCACACA...CCTTAGAGGATTGTAGCATTTTATTTTCGTCTGAAGGTAATGATAGCTATACAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS GCA 72 bp CGCTTGCGTCCTGGAGTGGGTGTGCCCAAGGGATGCTaGTCTTCTCCCAGATCAATGCCACCTGAAGTGTCT +
Preference number: 6 (lower is better)
Translates to: RLRPGVGVPKGC*SSPRSMPPEVS
Trigger: AGACACTTCAGGTGGCATTGATCTGGGAGAAGAGCAGCATCCCTTGGGCACACCCACTCCAGGACGCAAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS GCA 72 bp CTTCGCTTGCGTCCTGGAGTGGGTGTGCCCAAGGGATaGTGCTCTTCTCCCAGATCAATGCCACCTGAAGTG +
Preference number: 6 (lower is better)
Translates to: LRLRPGVGVPKG*CSSPRSMPPEV
Trigger: CACTTCAGGTGGCATTGATCTGGGAGAAGAGCAGCATCCCTTGGGCACACCCACTCCAGGACGCAAGCGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS GCA 72 bp CTCCCTTCCTTCTTCGCTTGCGTCCTGGAGTGGGTGTaGCCAAGGGATGCTGCTCTTCTCCCAGATCAATGC +
Preference number: 6 (lower is better)
Translates to: LPSFFACVLEWV*PRDAALLPDQC
Trigger: GCATTGATCTGGGAGAAGAGCAGCATCCCTTGGGCACACCCACTCCAGGACGCAAGCGAAGAAGGAAGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS TCA 72 bp CTGAGCTGGCTGAATGTAGACCAAAGACTGGGTGGCTaGCCATTGGGAAGGCACTCGACACTGTGGACAGGT +
Preference number: 6 (lower is better)
Translates to: LSWLNVDQRLGG*PLGRHSTLWTG
Trigger: ACCTGTCCACAGTGTCGAGTGCCTTCCCAATGGTCAGCCACCCAGTCTTTGGTCTACATTCAGCCAGCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392782.5
ENST00000392783.7
ENST00000437839.5
ENST00000482503.5
CDS CCA 72 bp GTCTGCCCTTGTTATCATGCGGCTGACCAGGAGCTGTaGCTCACTGCTGCTGCTCAGCATCAAGGGATTATT +
Preference number: 6 (lower is better)
Translates to: VCPCYHAADQEL*LTAAAQHQGII
Trigger: AATAATCCCTTGATGCTGAGCAGCAGCAGTGAGCCACAGCTCCTGGTCAGCCGCATGATAACAAGGGCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472953.1
CDS CAA 90 bp AGGTCGACCTTTCCGACGTCTCATCCTGGATTCCTCTCTTGCTCGTaGTCTATCTGGATTTGGTGGTCTTCCTCTACGACCTTCCATTGC +
Preference number: 6 (lower is better)
Translates to: RSTFPTSHPGFLSCS*SIWIWWSSSTTFHC
Trigger: GCAATGGAAGGTCGTAGAGGAAGACCACCAAATCCAGATAGACAACGAGCAAGAGAGGAATCCAGGATGAGACGTCGGAAAGGTCGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343439.9
ENST00000392782.5
ENST00000392783.7
ENST00000472953.1
ENST00000482501.5
CDS CAA 90 bp TTCCGCTCCAAATCAGCCAGCCTGGTTACAGCTATATCTAGGGGGTaGTCACTCTTCCGTTCTAGTGCATGTGCACTGCTTTCGTCTTCG +
Preference number: 6 (lower is better)
Translates to: FRSKSASLVTAISRG*SLFRSSACALLSSS
Trigger: CGAAGACGAAAGCAGTGCACATGCACTAGAACGGAAGAGTGACAACCCCCTAGATATAGCTGTAACCAGGCTGGCTGATTTGGAGCGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000392782.5
ENST00000392783.7
ENST00000426648.1
ENST00000474437.1
CDS TCA 72 bp GGGAAGGCACTCGACACTGTGGACAGGTTAAACGGTTaGTCCCCAGCTGTTCTGAATAAATGTCCACATGGG +
Preference number: 6 (lower is better)
Translates to: GKALDTVDRLNG*SPAVLNKCPHG
Trigger: CCCATGTGGACATTTATTCAGAACAGCTGGGGATCAACCGTTTAACCTGTCCACAGTGTCGAGTGCCTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392782.5
ENST00000392783.7
ENST00000437839.5
ENST00000482503.5
CDS GCA 72 bp GGTGTACCAAGTGTCCCCAAACCACCAAATTCTGAATaGCCTGAGCTGGCTGAATGTAGACCAAAGACTGGG +
Preference number: 6 (lower is better)
Translates to: GVPSVPKPPNSE*PELAECRPKTG
Trigger: CCCAGTCTTTGGTCTACATTCAGCCAGCTCAGGGCATTCAGAATTTGGTGGTTTGGGGACACTTGGTACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392782.5
ENST00000392783.7
ENST00000437839.5
ENST00000482503.5
CDS GCA 72 bp CTCTTCAATTCCGTCACCATCACCACTAACGGATGGTaGAGGAGCAGGGACAGTAACTGTGCCCACATTATC +
Preference number: 6 (lower is better)
Translates to: LFNSVTITTNGW*RSRDSNCAHII
Trigger: GATAATGTGGGCACAGTTACTGTCCCTGCTCCTGCACCATCCGTTAGTGGTGATGGTGACGGAATTGAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426648.1
CDS CCA 72 bp ATCCTCTTCAATTCCGTCACCATCACCACTAACGGATaGTGCAGGAGCAGGGACAGTAACTGTGCCCACATT +
Preference number: 6 (lower is better)
Translates to: ILFNSVTITTNG*CRSRDSNCAHI
Trigger: AATGTGGGCACAGTTACTGTCCCTGCTCCTGCACCATCCGTTAGTGGTGATGGTGACGGAATTGAAGAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426648.1
CDS CAA 72 bp GTCGACCTTTCCGACGTCTCATCCTGGATTCCTCTCTaGCTCGTTGTCTATCTGGATTTGGTGGTCTTCCTC +
Preference number: 6 (lower is better)
Translates to: VDLSDVSSWIPL*LVVYLDLVVFL
Trigger: GAGGAAGACCACCAAATCCAGATAGACAACGAGCAAGAGAGGAATCCAGGATGAGACGTCGGAAAGGTCGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343439.9
ENST00000392782.5
ENST00000392783.7
ENST00000472953.1
ENST00000482501.5
CDS CAA 90 bp CATTTGGAGGTCGACCTTTCCGACGTCTCATCCTGGATTCCTCTCTaGCTCGTTGTCTATCTGGATTTGGTGGTCTTCCTCTACGACCTT +
Preference number: 6 (lower is better)
Translates to: HLEVDLSDVSSWIPL*LVVYLDLVVFLYDL
Trigger: AAGGTCGTAGAGGAAGACCACCAAATCCAGATAGACAACGAGCAAGAGAGGAATCCAGGATGAGACGTCGGAAAGGTCGACCTCCAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343439.9
ENST00000392782.5
ENST00000392783.7
ENST00000472953.1
ENST00000482501.5
CDS GCA 72 bp TCGACCTTTCCGACGTCTCATCCTGGATTCCTCTCTTaGTCGTTGTCTATCTGGATTTGGTGGTCTTCCTCT +
Preference number: 6 (lower is better)
Translates to: STFPTSHPGFLS*SLSIWIWWSSS
Trigger: AGAGGAAGACCACCAAATCCAGATAGACAACGAGCAAGAGAGGAATCCAGGATGAGACGTCGGAAAGGTCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343439.9
ENST00000392782.5
ENST00000392783.7
ENST00000472953.1
ENST00000482501.5
CDS CCA 72 bp GGATTCCTCTCTTGCTCGTTGTCTATCTGGATTTGGTaGTCTTCCTCTACGACCTTCCATTGCCCTGATACG +
Preference number: 6 (lower is better)
Translates to: GFLSCSLSIWIW*SSSTTFHCPDT
Trigger: CGTATCAGGGCAATGGAAGGTCGTAGAGGAAGACCACCAAATCCAGATAGACAACGAGCAAGAGAGGAATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343439.9
ENST00000392782.5
ENST00000392783.7
ENST00000441143.1
ENST00000472953.1
ENST00000482501.5
CDS CAA 72 bp TTTCCGACGTCTCATCCTGGATTCCTCTCTTGCTCGTaGTCTATCTGGATTTGGTGGTCTTCCTCTACGACC +
Preference number: 6 (lower is better)
Translates to: FPTSHPGFLSCS*SIWIWWSSSTT
Trigger: GGTCGTAGAGGAAGACCACCAAATCCAGATAGACAACGAGCAAGAGAGGAATCCAGGATGAGACGTCGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343439.9
ENST00000392782.5
ENST00000392783.7
ENST00000472953.1
ENST00000482501.5
CDS CAA 90 bp GGGGAGCAAATAGTGGTGGAATTCCCAGTAATGGTGGAAAGAAGGTaGCTCCTGTACGAGTATGAGCATCAGTTGTTCGCCACCATTCTG +
Preference number: 6 (lower is better)
Translates to: GEQIVVEFPVMVERR*LLYEYEHQLFATIL
Trigger: CAGAATGGTGGCGAACAACTGATGCTCATACTCGTACAGGAGCAACCTTCTTTCCACCATTACTGGGAATTCCACCACTATTTGCTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343439.9
ENST00000392782.5
ENST00000392783.7
ENST00000437839.5
ENST00000467184.5
ENST00000482503.5
CDS TCA 72 bp AGTAATGGTGGAAAGAAGGTTGCTCCTGTACGAGTATaGGCATCAGTTGTTCGCCACCATTCTGCACCTGGA +
Preference number: 6 (lower is better)
Translates to: SNGGKKVAPVRV*ASVVRHHSAPG
Trigger: TCCAGGTGCAGAATGGTGGCGAACAACTGATGCTCATACTCGTACAGGAGCAACCTTCTTTCCACCATTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392783.7
ENST00000437839.5
CDS GCA 72 bp CCTATCAACACAGTAAACTGTAGAGTATCAGTTGTCTaGCCTTGTTATCATGCGGCTGACCAGGAGCTGTGG +
Preference number: 6 (lower is better)
Translates to: PINTVNCRVSVV*PCYHAADQELW
Trigger: CCACAGCTCCTGGTCAGCCGCATGATAACAAGGGCAGACAACTGATACTCTACAGTTTACTGTGTTGATAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472953.1
CDS CCA 72 bp CAACATTTGGAGGTCGACCTTTCCGACGTCTCATCCTaGATTCCTCTCTTGCTCGTTGTCTATCTGGATTTG +
Preference number: 6 (lower is better)
Translates to: QHLEVDLSDVSS*IPLLLVVYLDL
Trigger: CAAATCCAGATAGACAACGAGCAAGAGAGGAATCCAGGATGAGACGTCGGAAAGGTCGACCTCCAAATGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343439.9
ENST00000392782.5
ENST00000392783.7
ENST00000472953.1
ENST00000482501.5
CDS CCA 72 bp ACCTTCTTTCAATGTTCCGCTCCAAATCAGCCAGCCTaGTTACAGCTATATCTAGGGGGTTGTCACTCTTCC +
Preference number: 6 (lower is better)
Translates to: TFFQCSAPNQPA*LQLYLGGCHSS
Trigger: GGAAGAGTGACAACCCCCTAGATATAGCTGTAACCAGGCTGGCTGATTTGGAGCGGAACATTGAAAGAAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426648.1
CDS CAA 72 bp AAATCAGCCAGCCTGGTTACAGCTATATCTAGGGGGTaGTCACTCTTCCGTTCTAGTGCATGTGCACTGCTT +
Preference number: 6 (lower is better)
Translates to: KSASLVTAISRG*SLFRSSACALL
Trigger: AAGCAGTGCACATGCACTAGAACGGAAGAGTGACAACCCCCTAGATATAGCTGTAACCAGGCTGGCTGATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000392782.5
ENST00000392783.7
ENST00000426648.1
ENST00000474437.1
CDS CAA 90 bp GCAACTTTGCATCTGCGTTATCTAGGAATTCAGCATTGCCAACATTaGGAGGTCGACCTTTCCGACGTCTCATCCTGGATTCCTCTCTTG +
Preference number: 6 (lower is better)
Translates to: ATLHLRYLGIQHCQH*EVDLSDVSSWIPLL
Trigger: CAAGAGAGGAATCCAGGATGAGACGTCGGAAAGGTCGACCTCCAAATGTTGGCAATGCTGAATTCCTAGATAACGCAGATGCAAAGTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343439.9
ENST00000392782.5
ENST00000392783.7
ENST00000472953.1
ENST00000482501.5
CDS TCA 72 bp AGTAATGGTGGAAAGAAGGTTGCTCCTGTACGAGTATaGGCATCAGTTGTTCGCCACCATTCTGCACCACAT +
Preference number: 6 (lower is better)
Translates to: SNGGKKVAPVRV*ASVVRHHSAPH
Trigger: ATGTGGTGCAGAATGGTGGCGAACAACTGATGCTCATACTCGTACAGGAGCAACCTTCTTTCCACCATTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467184.5
CDS GCA 72 bp GCAACTTTGCATCTGCGTTATCTAGGAATTCAGCATTaGCAACATTTGGAGGTCGACCTTTCCGACGTCTCA +
Preference number: 6 (lower is better)
Translates to: ATLHLRYLGIQH*QHLEVDLSDVS
Trigger: TGAGACGTCGGAAAGGTCGACCTCCAAATGTTGGCAATGCTGAATTCCTAGATAACGCAGATGCAAAGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343439.9
ENST00000392782.5
ENST00000392783.7
ENST00000472953.1
ENST00000482501.5
CDS GCA 72 bp CCAGTGAATGTTTTCCACTGTTCTGATAAGACAACGTaGACCCATTTGCACCAGCATTTGGTTTGGGGGTCA +
Preference number: 6 (lower is better)
Translates to: PVNVFHCSDKTT*THLHQHLVWGS
Trigger: TGACCCCCAAACCAAATGCTGGTGCAAATGGGTGCACGTTGTCTTATCAGAACAGTGGAAAACATTCACTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS CCA 72 bp TCAAAAGACACCACTGCATTCCCTGCGGTCCATCTCTaGCTTCATAGAAGTCACCCACTCTTATTTTTGCAC +
Preference number: 6 (lower is better)
Translates to: SKDTTAFPAVHL*LHRSHPLLFLH
Trigger: GTGCAAAAATAAGAGTGGGTGACTTCTATGAAGCCAGAGATGGACCGCAGGGAATGCAGTGGTGTCTTTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343439.9
ENST00000392783.7
ENST00000441143.1
ENST00000472953.1
CDS CCA 72 bp TTCTTCTTTCAATGTTCCGCTCCAAATCAGCCAGCCTaGTTACAGCTATATCTAGGGGGTTGTCACTCTTCC +
Preference number: 6 (lower is better)
Translates to: FFFQCSAPNQPA*LQLYLGGCHSS
Trigger: GGAAGAGTGACAACCCCCTAGATATAGCTGTAACCAGGCTGGCTGATTTGGAGCGGAACATTGAAAGAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS CCA 72 bp TACTTCTTTCAATGTTCCGCTCCAAATCAGCCAGCCTaGTTACAGCTATATCTAGGGGGTTGTCACTCTTCC +
Preference number: 6 (lower is better)
Translates to: YFFQCSAPNQPA*LQLYLGGCHSS
Trigger: GGAAGAGTGACAACCCCCTAGATATAGCTGTAACCAGGCTGGCTGATTTGGAGCGGAACATTGAAAGAAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474437.1
CDS CAA 72 bp ATAGTGGTGGAATTCCCAGTAATGGTGGAAAGAAGGTaGCTCCTGTACGAGTATGAGCATCAGTTGTTCGCC +
Preference number: 6 (lower is better)
Translates to: IVVEFPVMVERR*LLYEYEHQLFA
Trigger: GGCGAACAACTGATGCTCATACTCGTACAGGAGCAACCTTCTTTCCACCATTACTGGGAATTCCACCACTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343439.9
ENST00000392782.5
ENST00000392783.7
ENST00000437839.5
ENST00000467184.5
ENST00000482503.5
CDS CAA 72 bp CATCTGCGTTATCTAGGAATTCAGCATTGCCAACATTaGGAGGTCGACCTTTCCGACGTCTCATCCTGGATT +
Preference number: 6 (lower is better)
Translates to: HLRYLGIQHCQH*EVDLSDVSSWI
Trigger: AATCCAGGATGAGACGTCGGAAAGGTCGACCTCCAAATGTTGGCAATGCTGAATTCCTAGATAACGCAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343439.9
ENST00000392782.5
ENST00000392783.7
ENST00000472953.1
ENST00000482501.5
CDS CAA 72 bp AGCAACTTTGCATCTGCGTTATCTAGGAATTCAGCATaGCCAACATTTGGAGGTCGACCTTTCCGACGTCTC +
Preference number: 6 (lower is better)
Translates to: SNFASALSRNSA*PTFGGRPFRRL
Trigger: GAGACGTCGGAAAGGTCGACCTCCAAATGTTGGCAATGCTGAATTCCTAGATAACGCAGATGCAAAGTTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343439.9
ENST00000392782.5
ENST00000392783.7
ENST00000472953.1
ENST00000482501.5
CDS CAA 72 bp CAGGCTCTGGACACATCCAACCCTTCACTTGCAAACTaGCTGATGCAACTCTCCTTTCTAGATCTTCTACCT +
Preference number: 6 (lower is better)
Translates to: QALDTSNPSLAN*LMQLSFLDLLP
Trigger: AGGTAGAAGATCTAGAAAGGAGAGTTGCATCAGCAAGTTTGCAAGTGAAGGGTTGGATGTGTCCAGAGCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392782.5
ENST00000392783.7
ENST00000426648.1
ENST00000474437.1
CDS CAA 72 bp GAAAGAAGGTTGCTCCTGTACGAGTATGAGCATCAGTaGTTCGCCACCATTCTGCACCTGGAAAAGATGCTA +
Preference number: 6 (lower is better)
Translates to: ERRLLLYEYEHQ*FATILHLEKML
Trigger: TAGCATCTTTTCCAGGTGCAGAATGGTGGCGAACAACTGATGCTCATACTCGTACAGGAGCAACCTTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392783.7
ENST00000437839.5
CDS TCA 72 bp ATTTGCACCAGCATTTGGTTTGGGGGTCATAACCTCTaGCTCAGGAGGCATCTTAGCTACTTCCAAAAGCTT +
Preference number: 6 (lower is better)
Translates to: ICTSIWFGGHNL*LRRHLSYFQKL
Trigger: AAGCTTTTGGAAGTAGCTAAGATGCCTCCTGAGTCAGAGGTTATGACCCCCAAACCAAATGCTGGTGCAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS GCA 72 bp AGAGGAGCCTCACAAGCAAGTCTTGTACTTCACCCATaGTGTCCCCTATATTTAGCAATCCCTCTTGAAGAA +
Preference number: 6 (lower is better)
Translates to: RGASQASLVLHP*CPLYLAIPLEE
Trigger: TTCTTCAAGAGGGATTGCTAAATATAGGGGACAGCATGGGTGAAGTACAAGACTTGCTTGTGAGGCTCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294905.4
ENST00000392782.5
ENST00000392783.7
ENST00000485917.1
ENST00000551504.5
CDS GCA 72 bp ATCTGGATTTGGTGGTCTTCCTCTACGACCTTCCATTaGCCTGATACGAGGAATGACATCCTCTTCTTTCAA +
Preference number: 6 (lower is better)
Translates to: IWIWWSSSTTFH*PDTRNDILFFQ
Trigger: TTGAAAGAAGAGGATGTCATTCCTCGTATCAGGGCAATGGAAGGTCGTAGAGGAAGACCACCAAATCCAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343439.9
ENST00000392782.5
ENST00000392783.7
ENST00000441143.1
ENST00000472953.1
ENST00000482501.5
CDS GCA 72 bp CATCACTGTTGGGAAACCTTACTGTATGAGAAGCAATaGTCCTCAAACCTTCTGCGTGCTGACATAGACCTT +
Preference number: 6 (lower is better)
Translates to: HHCWETLLYEKQ*SSNLLRADIDL
Trigger: AAGGTCTATGTCAGCACGCAGAAGGTTTGAGGAGCATTGCTTCTCATACAGTAAGGTTTCCCAACAGTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437839.5
CDS CCA 72 bp CTTAGCAATGCAAGCTGGACAAAACCAGTCTCCATCTaGGATTGTTGTAATCTTGGGTCTATGGCAGTAGGT +
Preference number: 6 (lower is better)
Translates to: LSNASWTKPVSI*DCCNLGSMAVG
Trigger: ACCTACTGCCATAGACCCAAGATTACAACAATCCCAGATGGAGACTGGTTTTGTCCAGCTTGCATTGCTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392782.5
ENST00000392783.7
ENST00000474437.1
ENST00000548440.1
CDS CAA 90 bp CTGCCTAAGTTTCTTTCCACATGGAGCATAATATGCTACTTCTCCTaGAAGGCGCCCTCCAAAGTTTCTTATTCTTGTCTCTCTCTGCCA +
Preference number: 6 (lower is better)
Translates to: LPKFLSTWSIICYFS*KAPSKVSYSCLSLP
Trigger: TGGCAGAGAGAGACAAGAATAAGAAACTTTGGAGGGCGCCTTCAAGGAGAAGTAGCATATTATGCTCCATGTGGAAAGAAACTTAGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343439.9
ENST00000392782.5
ENST00000392783.7
ENST00000441143.1
ENST00000472953.1
CDS CAA 90 bp AGTTTTCTTAGCAACTTTGCATCTGCGTTATCTAGGAATTCAGCATaGCCAACATTTGGAGGTCGACCTTTCCGACGTCTCATCCTGGAT +
Preference number: 6 (lower is better)
Translates to: SFLSNFASALSRNSA*PTFGGRPFRRLILD
Trigger: ATCCAGGATGAGACGTCGGAAAGGTCGACCTCCAAATGTTGGCAATGCTGAATTCCTAGATAACGCAGATGCAAAGTTGCTAAGAAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343439.9
ENST00000392782.5
ENST00000392783.7
ENST00000472953.1
ENST00000482501.5
CDS TCA 72 bp AGTAATGGTGGAAAGAAGGTTGCTCCTGTACGAGTATaGGCATCAGTTGTTCGCCACCATTCTGGAAAAGAT +
Preference number: 6 (lower is better)
Translates to: SNGGKKVAPVRV*ASVVRHHSGKD
Trigger: ATCTTTTCCAGAATGGTGGCGAACAACTGATGCTCATACTCGTACAGGAGCAACCTTCTTTCCACCATTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343439.9
ENST00000392782.5
ENST00000482503.5
CDS TCA 72 bp CACTGCGCCCGGCCAAGTCAAACAATTCTAAGTTGGTaGCTATATGTACTCTTATGCCATACCACCTTTAGT +
Preference number: 6 (lower is better)
Translates to: HCARPSQTILSW*LYVLLCHTTFS
Trigger: ACTAAAGGTGGTATGGCATAAGAGTACATATAGTCACCAACTTAGAATTGTTTGACTTGGCCGGGCGCAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472953.1
CDS GCA 72 bp GTACTGCCTAAGTTTCTTTCCACATGGAGCATAATATaGTACTTCTCCTTGAAGGCGCCCTCCAAAGTTTCT +
Preference number: 6 (lower is better)
Translates to: VLPKFLSTWSII*YFSLKAPSKVS
Trigger: AGAAACTTTGGAGGGCGCCTTCAAGGAGAAGTAGCATATTATGCTCCATGTGGAAAGAAACTTAGGCAGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343439.9
ENST00000392782.5
ENST00000392783.7
ENST00000441143.1
ENST00000472953.1
CDS GCA 72 bp TTTCCACATTGCTTTGCGTTGCTGTTGACTGAACGCTaGCCAGTGAATGTTTTCCACTGTTCTGATAAGACA +
Preference number: 6 (lower is better)
Translates to: FPHCFALLLTER*PVNVFHCSDKT
Trigger: TGTCTTATCAGAACAGTGGAAAACATTCACTGGGCAGCGTTCAGTCAACAGCAACGCAAAGCAATGTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS GCA 72 bp ATTTTTCCCATGCTATTGATTTCTGTAATTGCTGAATaGACAGAGCTACCTGTGCAGCACTGCGAGCTTCTG +
Preference number: 6 (lower is better)
Translates to: IFPMLLISVIAE*TELPVQHCELL
Trigger: CAGAAGCTCGCAGTGCTGCACAGGTAGCTCTGTGCATTCAGCAATTACAGAAATCAATAGCATGGGAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS CCA 72 bp TATTCTTTTCAGTCAGCGTTTTTAGTAACTGGTCATTaGGGAGAGGACTGTAGAACTTCCCTGGACCACTTG +
Preference number: 6 (lower is better)
Translates to: YSFQSAFLVTGH*GEDCRTSLDHL
Trigger: CAAGTGGTCCAGGGAAGTTCTACAGTCCTCTCCCCAATGACCAGTTACTAAAAACGCTGACTGAAAAGAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS CAA 72 bp TGTGGCTCACTGCTGCTGCTCAGCATCAAGGGATTATaGTACCAATTTCTACTGAATGTGTATAGCATTCGC +
Preference number: 6 (lower is better)
Translates to: CGSLLLLSIKGL*YQFLLNVYSIR
Trigger: GCGAATGCTATACACATTCAGTAGAAATTGGTACAATAATCCCTTGATGCTGAGCAGCAGCAGTGAGCCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472953.1
CDS TCA 72 bp TACTCTTCTTCTTTTGGAAGTGCCAGAGTGTGGGCTTaGAGTAAGTGTGGAAGAAGATGTACCAAGAAAAGC +
Preference number: 6 (lower is better)
Translates to: YSSSFGSARVWA*SKCGRRCTKKS
Trigger: GCTTTTCTTGGTACATCTTCTTCCACACTTACTTCAAGCCCACACTCTGGCACTTCCAAAAGAAGAAGAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392782.5
ENST00000392783.7
ENST00000472953.1
CDS TCA 72 bp ATTGGGGAGAGGACTGTAGAACTTCCCTGGACCACTTaGACCAGTATTAAACAGATTATTAGAGTCTGCCTT +
Preference number: 6 (lower is better)
Translates to: IGERTVELPWTT*TSIKQIIRVCL
Trigger: AAGGCAGACTCTAATAATCTGTTTAATACTGGTTCAAGTGGTCCAGGGAAGTTCTACAGTCCTCTCCCCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS TCA 72 bp GAAGACAGCATAGCCCCTTTGAAGTTACTGCTTGGATaGTTAATGACGATGAAGCAACAACAAAGCCAAGAC +
Preference number: 6 (lower is better)
Translates to: EDSIAPLKLLLG*LMTMKQQQSQD
Trigger: GTCTTGGCTTTGTTGTTGCTTCATCGTCATTAATCATCCAAGCAGTAACTTCAAAGGGGCTATGCTGTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485917.1
CDS CCA 72 bp TTTATACAGCAGGGATTGCTGTTTTGTTTACACCCTTaGCTCCATTGCCAGGACAATGCCTTTAGTCTTCAA +
Preference number: 6 (lower is better)
Translates to: FIQQGLLFCLHP*LHCQDNAFSLQ
Trigger: TTGAAGACTAAAGGCATTGTCCTGGCAATGGAGCCAAGGGTGTAAACAAAACAGCAATCCCTGCTGTATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483316.1
CDS CCA 72 bp TGGAGAAGACAGCATAGCCCCTTTGAAGTTACTGCTTaGATGATTAATGACGATGAAGCAACAACAAAGCCA +
Preference number: 6 (lower is better)
Translates to: WRRQHSPFEVTA*MINDDEATTKP
Trigger: TGGCTTTGTTGTTGCTTCATCGTCATTAATCATCCAAGCAGTAACTTCAAAGGGGCTATGCTGTCTTCTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485917.1
CDS CAA 72 bp GCCCTTCTCAGAGCAATTTATCTAGGGCCCATAATGTaGCTATGTAGTTCTGGTGACATTAACTTCGATCAC +
Preference number: 6 (lower is better)
Translates to: ALLRAIYLGPIM*LCSSGDINFDH
Trigger: GTGATCGAAGTTAATGTCACCAGAACTACATAGCAACATTATGGGCCCTAGATAAATTGCTCTGAGAAGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483316.1
CDS TCA 72 bp GCTGATGCAACTCTCCTTTCTAGATCTTCTACCTGTTaGAGGACACTCAAATCCATTTCCATTGCTTGTTCT +
Preference number: 6 (lower is better)
Translates to: ADATLLSRSSTC*RTLKSISIACS
Trigger: AGAACAAGCAATGGAAATGGATTTGAGTGTCCTTCAACAGGTAGAAGATCTAGAAAGGAGAGTTGCATCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392782.5
ENST00000392783.7
ENST00000426648.1
ENST00000474437.1
CDS CAA 72 bp TTTCGGGACCATTTCGATTACTTTTTCCCGAAGTCCTaGAATGGAATGAAGAAGAATCATGATTCTGGGCTG +
Preference number: 6 (lower is better)
Translates to: FRDHFDYFFPKS*NGMKKNHDSGL
Trigger: CAGCCCAGAATCATGATTCTTCTTCATTCCATTCAAGGACTTCGGGAAAAAGTAATCGAAATGGTCCCGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343439.9
ENST00000392782.5
ENST00000392783.7
ENST00000467184.5
ENST00000482503.5
CDS CAA 72 bp TTTCTTTCCACATGGAGCATAATATGCTACTTCTCCTaGAAGGCGCCCTCCAAAGTTTCTTATTCTTGTCTC +
Preference number: 6 (lower is better)
Translates to: FLSTWSIICYFS*KAPSKVSYSCL
Trigger: GAGACAAGAATAAGAAACTTTGGAGGGCGCCTTCAAGGAGAAGTAGCATATTATGCTCCATGTGGAAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343439.9
ENST00000392782.5
ENST00000392783.7
ENST00000441143.1
ENST00000472953.1
CDS TCA 72 bp GATTCCTTAACGTGTCTATTGTTAATCGTTCTGCAATaGACATGGGAGTGCAGACATCTCTTAGACAAACTG +
Preference number: 6 (lower is better)
Translates to: DSLTCLLLIVLQ*TWECRHLLDKL
Trigger: CAGTTTGTCTAAGAGATGTCTGCACTCCCATGTTCATTGCAGAACGATTAACAATAGACACGTTAAGGAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483316.1
CDS GCA 72 bp TCAAAGCCCAAAACTTTACCAAAGTTTCGTAAGAACTaGACCACCATGAGACAGTCTGAAAATGTACTTCCA +
Preference number: 6 (lower is better)
Translates to: SKPKTLPKFRKN*TTMRQSENVLP
Trigger: TGGAAGTACATTTTCAGACTGTCTCATGGTGGTGCAGTTCTTACGAAACTTTGGTAAAGTTTTGGGCTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294905.4
ENST00000392782.5
ENST00000392783.7
ENST00000485917.1
ENST00000551504.5
CDS CCA 72 bp GTCTTCAGACTTTCAGTAAGCTCAGTTTGTCCACAGTaGGCTTCCATAAATATCTGTAAAATCTCGGAAACA +
Preference number: 6 (lower is better)
Translates to: VFRLSVSSVCPQ*ASINICKISET
Trigger: TGTTTCCGAGATTTTACAGATATTTATGGAAGCCCACTGTGGACAAACTGAGCTTACTGAAAGTCTGAAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392782.5
ENST00000392783.7
ENST00000551504.5
CDS CAA 72 bp CTTCTACCTGTTGAAGGACACTCAAATCCATTTCCATaGCTTGTTCTTCTACTGACCAGTTCTCCACAATAT +
Preference number: 6 (lower is better)
Translates to: LLPVEGHSNPFP*LVLLLTSSPQY
Trigger: ATATTGTGGAGAACTGGTCAGTAGAAGAACAAGCAATGGAAATGGATTTGAGTGTCCTTCAACAGGTAGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392782.5
ENST00000392783.7
ENST00000474437.1
CDS CAA 90 bp CTGAAGTGGCCTTTTCATTCTGTGGTACTGGAGATTCACTTTTACTaGAAGCAACATTGGAAGTCAAGAATGAATTACCATTTCCTTCTG +
Preference number: 6 (lower is better)
Translates to: LKWPFHSVVLEIHFY*KQHWKSRMNYHFLL
Trigger: CAGAAGGAAATGGTAATTCATTCTTGACTTCCAATGTTGCTTCAAGTAAAAGTGAATCTCCAGTACCACAGAATGAAAAGGCCACTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS CAA 90 bp TTTCTAGATCTTCTACCTGTTGAAGGACACTCAAATCCATTTCCATaGCTTGTTCTTCTACTGACCAGTTCTCCACAATATCTCGAGTTA +
Preference number: 6 (lower is better)
Translates to: FLDLLPVEGHSNPFP*LVLLLTSSPQYLEL
Trigger: TAACTCGAGATATTGTGGAGAACTGGTCAGTAGAAGAACAAGCAATGGAAATGGATTTGAGTGTCCTTCAACAGGTAGAAGATCTAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392782.5
ENST00000392783.7
ENST00000474437.1
CDS TCA 72 bp AATCTTTACTACTGGGAATGTCTGAATCTGTTCCTCTaGATTGTTCCACTAAAGATTTTGCAGGATGGGAGT +
Preference number: 6 (lower is better)
Translates to: NLYYWECLNLFL*IVPLKILQDGS
Trigger: ACTCCCATCCTGCAAAATCTTTAGTGGAACAATTCAGAGGAACAGATTCAGACATTCCCAGTAGTAAAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343439.9
ENST00000392782.5
ENST00000392783.7
ENST00000441143.1
ENST00000472953.1
CDS CAA 90 bp GTTTGTCCCATGGAACTTGAAGCAGTAGTGGATAGTACAGATGTGTaGATACCAATTACAGATGATGTATTACTTCCATTTATTGACCCA +
Preference number: 6 (lower is better)
Translates to: VCPMELEAVVDSTDV*IPITDDVLLPFIDP
Trigger: TGGGTCAATAAATGGAAGTAATACATCATCTGTAATTGGTATCAACACATCTGTACTATCCACTACTGCTTCAAGTTCCATGGGACAAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343439.9
ENST00000392782.5
ENST00000392783.7
ENST00000467184.5
ENST00000482503.5
ENST00000541068.6
CDS CAA 90 bp CATCTTCCTCATCTTCTTCTTCATCATCTTCCTCTTCATCCTCATTaGAATCTTCAGAATCTTTACTACTGGGAATGTCTGAATCTGTTC +
Preference number: 6 (lower is better)
Translates to: HLPHLLLHHLPLHPH*NLQNLYYWECLNLF
Trigger: GAACAGATTCAGACATTCCCAGTAGTAAAGATTCTGAAGATTCAAATGAGGATGAAGAGGAAGATGATGAAGAAGAAGATGAGGAAGATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343439.9
ENST00000392782.5
ENST00000392783.7
ENST00000441143.1
ENST00000472953.1
CDS CAA 90 bp CCAGCTCTGCCTATATCAGAATCATCTTCATTAAATGTTTCACAGTaGTCAAAAACAAGCCTGACATCTAGAGCAAAGGTTTCAAGGTTT +
Preference number: 6 (lower is better)
Translates to: PALPISESSSLNVSQ*SKTSLTSRAKVSRF
Trigger: AAACCTTGAAACCTTTGCTCTAGATGTCAGGCTTGTTTTTGACAACTGTGAAACATTTAATGAAGATGATTCTGATATAGGCAGAGCTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS TCA 72 bp AACTATTTCAAGAACCTATTGCTCAAGAAGTATTCCTaGATCTCCAGACAGTTATATTTGGGGCCTCTTTTC +
Preference number: 6 (lower is better)
Translates to: NYFKNLLLKKYS*ISRQLYLGPLF
Trigger: GAAAAGAGGCCCCAAATATAACTGTCTGGAGATTCAGGAATACTTCTTGAGCAATAGGTTCTTGAAATAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483316.1
CDS CAA 90 bp AATTGTTTCTCACTGCTGTATTTTTGGTCACATTATTTCTTCCACTaGAGAACCTCCAAAGCCTATATAACATGCTCTTTGATTTCTGCC +
Preference number: 6 (lower is better)
Translates to: NCFSLLYFWSHYFFH*RTSKAYITCSLISA
Trigger: GGCAGAAATCAAAGAGCATGTTATATAGGCTTTGGAGGTTCTCAAGTGGAAGAAATAATGTGACCAAAAATACAGCAGTGAGAAACAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483316.1
CDS CAA 90 bp AGTATTCCTGAATCTCCAGACAGTTATATTTGGGGCCTCTTTTCATaGTTCATGATAGATTATTGGCAATTTGTCCTTTATCAGACCATT +
Preference number: 6 (lower is better)
Translates to: SIPESPDSYIWGLFS*FMIDYWQFVLYQTI
Trigger: AATGGTCTGATAAAGGACAAATTGCCAATAATCTATCATGAACAATGAAAAGAGGCCCCAAATATAACTGTCTGGAGATTCAGGAATACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483316.1
CDS TCA 72 bp TTTACCTTCTACCACCCATTTATCTCTCCTCAAGTTTaGCATATAATCAATGTTCTTGTCGATTTCACTGAC +
Preference number: 6 (lower is better)
Translates to: FTFYHPFISPQV*HIINVLVDFTD
Trigger: GTCAGTGAAATCGACAAGAACATTGATTATATGTCAAACTTGAGGAGAGATAAATGGGTGGTAGAAGGTAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392782.5
ENST00000392783.7
CDS CCA 72 bp TCAAGAAGTATTCCTGAATCTCCAGACAGTTATATTTaGGGCCTCTTTTCATTGTTCATGATAGATTATTGG +
Preference number: 6 (lower is better)
Translates to: SRSIPESPDSYI*GLFSLFMIDYW
Trigger: CCAATAATCTATCATGAACAATGAAAAGAGGCCCCAAATATAACTGTCTGGAGATTCAGGAATACTTCTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483316.1
CDS CAA 72 bp TCTCATATTACATTTAGGTGTTGTGTCTCCCTAGTTTaGTACAGTCGTGTTATTTCCTCAGTCTTGTTTGTT +
Preference number: 6 (lower is better)
Translates to: SHITFRCCVSLV*YSRVISSVLFV
Trigger: AACAAACAAGACTGAGGAAATAACACGACTGTACAAAACTAGGGAGACACAACACCTAAATGTAATATGAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483316.1
CDS GCA 72 bp ATTCAACATTCTGTGGGATCTACTTTAGTGTGCCTTTaGACAGTAATATTCCCGAGTAAACAATTTAGAAAA +
Preference number: 6 (lower is better)
Translates to: IQHSVGSTLVCL*TVIFPSKQFRK
Trigger: TTTTCTAAATTGTTTACTCGGGAATATTACTGTGCAAAGGCACACTAAAGTAGATCCCACAGAATGTTGAAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472953.1
CDS CAA 72 bp GAATCTCCAGACAGTTATATTTGGGGCCTCTTTTCATaGTTCATGATAGATTATTGGCAATTTGTCCTTTAT +
Preference number: 6 (lower is better)
Translates to: ESPDSYIWGLFS*FMIDYWQFVLY
Trigger: ATAAAGGACAAATTGCCAATAATCTATCATGAACAATGAAAAGAGGCCCCAAATATAACTGTCTGGAGATTC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483316.1