RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for B9D2 (Homo sapiens)

Ensembl gene IDs: ENSG00000123810

Ensembl transcript IDs: ENST00000243578.8, ENST00000594416.1, ENST00000601597.1, ENST00000675972.1

Found 165 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGCGGTCGAAGTTGCGGAGCAGCAGGCCGATCTCCAGGTGCACGGTaGCACCAGCAGCTGTGTGCAGGCGATAGCGGTCGGCCCCACTGT +
Preference number: 1 (lower is better)
Translates to: SGRSCGAAGRSPGAR*HQQLCAGDSGRPHC
Trigger: ACAGTGGGGCCGACCGCTATCGCCTGCACACAGCTGCTGGTGGCACCGTGCACCTGGAGATCGGCCTGCTGCTCCGCAACTTCGACCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594416.1
3UTR CCA 90 bp CACCAGCAGCTGTGTGCAGGCGATAGCGGTCGGCCCCACTGTAGATaGTGTCCCCATGCAGCAGCTGCGGCCCACCACCCACGAAAGCCC +
Preference number: 1 (lower is better)
Translates to: HQQLCAGDSGRPHCR*CPHAAAAAHHPRKP
Trigger: GGGCTTTCGTGGGTGGTGGGCCGCAGCTGCTGCATGGGGACACCATCTACAGTGGGGCCGACCGCTATCGCCTGCACACAGCTGCTGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594416.1
3UTR GCA 90 bp CTGGTGGGTGCCCGGGCTACTGGGCACATGGCAAAATCCATAGCCTaGAAGCTGGCAGCGGCCAAAGCTGTCCTGGGACCACACCTGGAA +
Preference number: 1 (lower is better)
Translates to: LVGARATGHMAKSIA*KLAAAKAVLGPHLE
Trigger: TTCCAGGTGTGGTCCCAGGACAGCTTTGGCCGCTGCCAGCTTGCAGGCTATGGATTTTGCCATGTGCCCAGTAGCCCGGGCACCCACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594416.1
3UTR-3UTR GCA 90 bp GATGGTGTCCCCATGCAGCAGCTGCGGCCCACCACCCACGAAAGCCCGTGCCAAAGGCCAGCTGGTGGGTaGCCGGGCTACTGGGCACAT +
Preference number: 2 (lower is better)
Translates to: DGVPMQQLRPTTHESPCQRPAGG*PGYWAH
Trigger: ATGTGCCCAGTAGCCCGGGCACCCACCAGCTGGCCT...TTGGCACGGGCTTTCGTGGGTGGTGGGCCGCAGCTGCTGCATGGGGACACCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594416.1
3UTR-3UTR CCA 90 bp GCCGTAGCGGTCGAAGTTGCGGAGCAGCAGGCCGATCTCCAGGTGCACGGTGCCTCCTGGGACCACACCTaGAAATGGAGCCGGGGCCAG +
Preference number: 2 (lower is better)
Translates to: AVAVEVAEQQADLQVHGASWDHT*KWSRGQ
Trigger: CTGGCCCCGGCTCCATTTCCAGGTGTGGTCCCAGGA...GGCACCGTGCACCTGGAGATCGGCCTGCTGCTCCGCAACTTCGACCGCTACGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594416.1
3UTR-3UTR TCA 90 bp CTGCGGCCCACCACCCACGAAAGCCCGTGCCAACTGTTCTCGCCAACTGCCCAGAGCCGGGGCCAGCCTTaGAGACCTTTGGTGGCGAAG +
Preference number: 2 (lower is better)
Translates to: LRPTTHESPCQLFSPTAQSRGQP*RPLVAK
Trigger: CTTCGCCACCAAAGGTCTTCAAGGCTGGCCCCGGCT...CTGGGCAGTTGGCGAGAACAGTTGGCACGGGCTTTCGTGGGTGGTGGGCCGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594416.1
3UTR-3UTR GCA 90 bp GCCACCAGCAGCTGTGTGCAGGCGATAGCGGTCGGCCCCACTGTAGATGGTGTCACTGTTCTCGCCAACTaGCCAGGGGCCGCCACGTGG +
Preference number: 2 (lower is better)
Translates to: ATSSCVQAIAVGPTVDGVTVLAN*PGAATW
Trigger: CCACGTGGCGGCCCCTGGGCAGTTGGCGAGAACAGT...GACACCATCTACAGTGGGGCCGACCGCTATCGCCTGCACACAGCTGCTGGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594416.1
3UTR-3UTR GCA 90 bp GGCCGATCTCCAGGTGCACGGTGCCACCAGCAGCTGTGTGCAGGCGATAGCGGTTCCCCATGCAGCAGCTaGGGCCCACCACCCACGAAA +
Preference number: 2 (lower is better)
Translates to: GRSPGARCHQQLCAGDSGSPCSS*GPPPTK
Trigger: TTTCGTGGGTGGTGGGCCGCAGCTGCTGCATGGGGA...ACCGCTATCGCCTGCACACAGCTGCTGGTGGCACCGTGCACCTGGAGATCGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594416.1
3UTR-3UTR CCA 90 bp CGAAAGCCCGTGCCAACTGTTCTCGCCAACTGCCCAGGGGCCGCCACGTGGGGCCGAAGTGCAGGTCGATaGGGTGGGACCAGTAAGCCA +
Preference number: 2 (lower is better)
Translates to: RKPVPTVLANCPGAATWGRSAGR*GGTSKP
Trigger: TGGCTTACTGGTCCCACCCCATCGACCTGCACTTCG...GCCCCACGTGGCGGCCCCTGGGCAGTTGGCGAGAACAGTTGGCACGGGCTTTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594416.1
3UTR-3UTR GCA 90 bp GCACGGTGCCACCAGCAGCTGTGTGCAGGCGATAGCGGTCGGCCCCACTGTAGACCTTTGGTGGCGAAGTaGAGGTCGATGGGGTGGGAC +
Preference number: 2 (lower is better)
Translates to: ARCHQQLCAGDSGRPHCRPLVAK*RSMGWD
Trigger: GTCCCACCCCATCGACCTGCACTTCGCCACCAAAGG...TCTACAGTGGGGCCGACCGCTATCGCCTGCACACAGCTGCTGGTGGCACCGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594416.1
3UTR-3UTR CCA 90 bp GCCGTAGCGGTCGAAGTTGCGGAGCAGCAGGCCGATCTCCAGGTGCACGGTGCCCGGCCAAAGCTGTCCTaGGACCACACCTGGAAATGG +
Preference number: 2 (lower is better)
Translates to: AVAVEVAEQQADLQVHGARPKLS*DHTWKW
Trigger: CCATTTCCAGGTGTGGTCCCAGGACAGCTTTGGCCG...GGCACCGTGCACCTGGAGATCGGCCTGCTGCTCCGCAACTTCGACCGCTACGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594416.1
3UTR-3UTR CCA 90 bp CGCCGTAGCGGTCGAAGTTGCGGAGCAGCAGGCCGATCTCCAGGTGCACGGTGCGGGTGCCCGGGCTACTaGGCACATGGCAAAATCCAT +
Preference number: 2 (lower is better)
Translates to: RRSGRSCGAAGRSPGARCGCPGY*AHGKIH
Trigger: ATGGATTTTGCCATGTGCCCAGTAGCCCGGGCACCC...GCACCGTGCACCTGGAGATCGGCCTGCTGCTCCGCAACTTCGACCGCTACGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594416.1
3UTR-3UTR GCA 90 bp CAGGTGCACGGTGCCACCAGCAGCTGTGTGCAGGCGATAGCGGTCGGCCCCACTACCCACGAAAGCCCGTaGCAACTGTTCTCGCCAACT +
Preference number: 2 (lower is better)
Translates to: QVHGATSSCVQAIAVGPTTHESP*QLFSPT
Trigger: AGTTGGCGAGAACAGTTGGCACGGGCTTTCGTGGGT...AGTGGGGCCGACCGCTATCGCCTGCACACAGCTGCTGGTGGCACCGTGCACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594416.1
3UTR-3UTR GCA 90 bp GCGGCCCACCACCCACGAAAGCCCGTGCCAACTGTTCTCGCCAACTGCCCAGGGGCAAAATCCATAGCCTaGAAGCTGGCAGCGGCCAAA +
Preference number: 2 (lower is better)
Translates to: AAHHPRKPVPTVLANCPGAKSIA*KLAAAK
Trigger: TTTGGCCGCTGCCAGCTTGCAGGCTATGGATTTTGC...CCCTGGGCAGTTGGCGAGAACAGTTGGCACGGGCTTTCGTGGGTGGTGGGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594416.1
3UTR-3UTR CCA 90 bp GACCCCGAGGTCCTAGAAAGGACAGAAGCGGTGCCATGCCTTAGCTGGGGTCAGTGGGTGTCCGGGGTGTaGATGGTGGTGACGTTGGAG +
Preference number: 2 (lower is better)
Translates to: DPEVLERTEAVPCLSWGQWVSGV*MVVTLE
Trigger: CTCCAACGTCACCACCATCCACACCCCGGACACCCA...CTGACCCCAGCTAAGGCATGGCACCGCTTCTGTCCTTTCTAGGACCTCGGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
3UTR-3UTR CCA 90 bp CCCGAGGTCCTAGAAAGGACAGAAGCGGTGCCATGCCTTAGCTGGGGTCAGCTCATCCTCCCCCATCACTaGGTGTCCGGGGTGTGGATG +
Preference number: 2 (lower is better)
Translates to: PEVLERTEAVPCLSWGQLILPHH*VSGVWM
Trigger: CATCCACACCCCGGACACCCAGTGATGGGGGAGGAT...GAGCTGACCCCAGCTAAGGCATGGCACCGCTTCTGTCCTTTCTAGGACCTCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
3UTR-3UTR CCA 90 bp GGTCGAAGTTGCGGAGCAGCAGGCCGATCTCCAGGTGCACGGTGCCACCAGCAGAGCCTTGAAGACCTTTaGTGGCGAAGTGCAGGTCGA +
Preference number: 2 (lower is better)
Translates to: GRSCGAAGRSPGARCHQQSLEDL*WRSAGR
Trigger: TCGACCTGCACTTCGCCACCAAAGGTCTTCAAGGCT...CTGCTGGTGGCACCGTGCACCTGGAGATCGGCCTGCTGCTCCGCAACTTCGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594416.1
3UTR-3UTR CCA 90 bp AGCAGCTGTGTGCAGGCGATAGCGGTCGGCCCCACTGTAGATGGTGTCCCCATGCTTGAAGACCTTTGGTaGCGAAGTGCAGGTCGATGG +
Preference number: 2 (lower is better)
Translates to: SSCVQAIAVGPTVDGVPMLEDLW*RSAGRW
Trigger: CCATCGACCTGCACTTCGCCACCAAAGGTCTTCAAG...CATGGGGACACCATCTACAGTGGGGCCGACCGCTATCGCCTGCACACAGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594416.1
3UTR-3UTR CCA 90 bp CTGCGACCCCATACATTTACTGTCCCCAATTTACAGATAGGGAAACTGGGCCCAATCCTCCCCCATCACTaGGTGTCCGGGGTGTGGATG +
Preference number: 2 (lower is better)
Translates to: LRPHTFTVPNLQIGKLGPILPHH*VSGVWM
Trigger: CATCCACACCCCGGACACCCAGTGATGGGGGAGGAT...TGGGCCCAGTTTCCCTATCTGTAAATTGGGGACAGTAAATGTATGGGGTCGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
3UTR GCA 72 bp ATGCAGCAGCTGCGGCCCACCACCCACGAAAGCCCGTaGCAACTGTTCTCGCCAACTGCCCAGGGGCCGCCA +
Preference number: 3 (lower is better)
Translates to: MQQLRPTTHESP*QLFSPTAQGPP
Trigger: TGGCGGCCCCTGGGCAGTTGGCGAGAACAGTTGGCACGGGCTTTCGTGGGTGGTGGGCCGCAGCTGCTGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594416.1
3UTR-3UTR CAA 90 bp GGCCCACCACCCACGAAAGCCCGTGCCAACTGTTCTCGCCAACTGCCCAGGGGCGAGCCGGGGCCAGCCTaGAAGACCTTTGGTGGCGAA +
Preference number: 3 (lower is better)
Translates to: GPPPTKARANCSRQLPRGEPGPA*KTFGGE
Trigger: TTCGCCACCAAAGGTCTTCAAGGCTGGCCCCGGCTC...GCCCCTGGGCAGTTGGCGAGAACAGTTGGCACGGGCTTTCGTGGGTGGTGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594416.1
3UTR GCA 72 bp AGTTGCGGAGCAGCAGGCCGATCTCCAGGTGCACGGTaGCACCAGCAGCTGTGTGCAGGCGATAGCGGTCGG +
Preference number: 3 (lower is better)
Translates to: SCGAAGRSPGAR*HQQLCAGDSGR
Trigger: CCGACCGCTATCGCCTGCACACAGCTGCTGGTGGCACCGTGCACCTGGAGATCGGCCTGCTGCTCCGCAACT
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594416.1
3UTR GCA 72 bp GAGTCCCTCAGCACTCCACGCCGTAGCGGTCGAAGTTaGGGAGCAGCAGGCCGATCTCCAGGTGCACGGTGC +
Preference number: 3 (lower is better)
Translates to: ESLSTPRRSGRS*GAAGRSPGARC
Trigger: GCACCGTGCACCTGGAGATCGGCCTGCTGCTCCGCAACTTCGACCGCTACGGCGTGGAGTGCTGAGGGACTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594416.1
3UTR CCA 72 bp CTGTGTGCAGGCGATAGCGGTCGGCCCCACTGTAGATaGTGTCCCCATGCAGCAGCTGCGGCCCACCACCCA +
Preference number: 3 (lower is better)
Translates to: LCAGDSGRPHCR*CPHAAAAAHHP
Trigger: TGGGTGGTGGGCCGCAGCTGCTGCATGGGGACACCATCTACAGTGGGGCCGACCGCTATCGCCTGCACACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594416.1
3UTR CCA 72 bp ACGTGGGGCAGGCCAGCTGGTGGGTGCCCGGGCTACTaGGCACATGGCAAAATCCATAGCCTGCAAGCTGGC +
Preference number: 3 (lower is better)
Translates to: TWGRPAGGCPGY*AHGKIHSLQAG
Trigger: GCCAGCTTGCAGGCTATGGATTTTGCCATGTGCCCAGTAGCCCGGGCACCCACCAGCTGGCCTGCCCCACGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594416.1
3UTR CCA 72 bp TGTGCTCTTGACCACTGTGCCATCCTCCCCCATCACTaGGTGTCCGGGGTGTGGATGGTGGTGACGTTGGAG +
Preference number: 3 (lower is better)
Translates to: CALDHCAILPHH*VSGVWMVVTLE
Trigger: CTCCAACGTCACCACCATCCACACCCCGGACACCCAGTGATGGGGGAGGATGGCACAGTGGTCAAGAGCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
3UTR CCA 72 bp GGAAATGGAGCCGGGGCCAGCCTTGAAGACCTTTGGTaGCGAAGTGCAGGTCGATGGGGTGGGACCAGTAAG +
Preference number: 3 (lower is better)
Translates to: GNGAGASLEDLW*RSAGRWGGTSK
Trigger: CTTACTGGTCCCACCCCATCGACCTGCACTTCGCCACCAAAGGTCTTCAAGGCTGGCCCCGGCTCCATTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594416.1
3UTR TCA 72 bp ACAGAAGCGGTGCCATGCCTTAGCTGGGGTCAGCTCTaGCAGTCTCTAGAGTCTGTGCTCTTGACCACTGTG +
Preference number: 3 (lower is better)
Translates to: TEAVPCLSWGQL*QSLESVLLTTV
Trigger: CACAGTGGTCAAGAGCACAGACTCTAGAGACTGTCAGAGCTGACCCCAGCTAAGGCATGGCACCGCTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
3UTR-3UTR CAA 90 bp AACACCCTGCGACCCCATACATTTACTGTCCCCAATTTACAGATAGGGAAACTGCTAGAGTCTGTGCTCTaGACCACTGTGCCATCCTCC +
Preference number: 3 (lower is better)
Translates to: NTLRPHTFTVPNLQIGKLLESVL*TTVPSS
Trigger: GGAGGATGGCACAGTGGTCAAGAGCACAGACTCTAG...CAGTTTCCCTATCTGTAAATTGGGGACAGTAAATGTATGGGGTCGCAGGGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR TCA 90 bp CGTAGCGGTCGAAGTTGCGGAGCAGCAGGCCGATCTCCAGGTGCACGGTGCCACGCCCTCCCGCACGCCTaGCAGGAGCTTCCATGCCGC +
Preference number: 4 (lower is better)
Translates to: RSGRSCGAAGRSPGARCHALPHA*QELPCR
Trigger: GCGGCATGGAAGCTCCTGTCAGGCGTGCGGGAGGGC...GTGGCACCGTGCACCTGGAGATCGGCCTGCTGCTCCGCAACTTCGACCGCTACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594416.1
CDS-3UTR TCA 90 bp CTGTGCCATCCTCCCCCATCACTGGGTGTCCGGGGTGTGGATGGTGGTGACGTTGCCCTCCCGCACGCCTaGCAGGAGCTTCCATGCCGC +
Preference number: 4 (lower is better)
Translates to: LCHPPPSLGVRGVDGGDVALPHA*QELPCR
Trigger: GCGGCATGGAAGCTCCTGTCAGGCGTGCGGGAGGGC...AACGTCACCACCATCCACACCCCGGACACCCAGTGATGGGGGAGGATGGCACAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR TCA 90 bp GGCCCACCACCCACGAAAGCCCGTGCCAACTGTTCTCGCCAACTGCCCAGGGGCAGCCGGGGCCAGCCTTaGAGACCTTTGGTGGCGAAG +
Preference number: 4 (lower is better)
Translates to: GPPPTKARANCSRQLPRGSRGQP*RPLVAK
Trigger: CTTCGCCACCAAAGGTCTTCAAGGCTGGCCCCGGCT...GCCCCTGGGCAGTTGGCGAGAACAGTTGGCACGGGCTTTCGTGGGTGGTGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594416.1
CDS-3UTR GCA 90 bp CTGCGGCCCACCACCCACGAAAGCCCGTGCCAACTGTTCTCGCCAACTGCCCAGAGGCCAGCTGGTGGGTaGCCGGGCTACTGGGCACAT +
Preference number: 4 (lower is better)
Translates to: LRPTTHESPCQLFSPTAQRPAGG*PGYWAH
Trigger: ATGTGCCCAGTAGCCCGGGCACCCACCAGCTGGCCT...CTGGGCAGTTGGCGAGAACAGTTGGCACGGGCTTTCGTGGGTGGTGGGCCGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594416.1
CDS-3UTR GCA 90 bp TGCGGCCCACCACCCACGAAAGCCCGTGCCAACTGTTCTCGCCAACTGCCCAGGACTGTTCTCGCCAACTaGCCAGGGGCCGCCACGTGG +
Preference number: 4 (lower is better)
Translates to: CGPPPTKARANCSRQLPRTVLAN*PGAATW
Trigger: CCACGTGGCGGCCCCTGGGCAGTTGGCGAGAACAGT...CCTGGGCAGTTGGCGAGAACAGTTGGCACGGGCTTTCGTGGGTGGTGGGCCGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594416.1
CDS-3UTR CCA 90 bp GTGCTCTTGACCACTGTGCCATCCTCCCCCATCACTGGGTGTCCGGGGTGTGGAGTGGGGCAGGCCAGCTaGTGGGTGCCCGGGCTACTG +
Preference number: 4 (lower is better)
Translates to: VLLTTVPSSPITGCPGCGVGQAS*WVPGLL
Trigger: CAGTAGCCCGGGCACCCACCAGCTGGCCTGCCCCAC...TCCACACCCCGGACACCCAGTGATGGGGGAGGATGGCACAGTGGTCAAGAGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR CCA 90 bp GGGCCAGCCTTGAAGACCTTTGGTGGCGAAGTGCAGGTCGATGGGGTGGGACCAGTGGGGCAGGCCAGCTaGTGGGTGCCCGGGCTACTG +
Preference number: 4 (lower is better)
Translates to: GPALKTFGGEVQVDGVGPVGQAS*WVPGLL
Trigger: CAGTAGCCCGGGCACCCACCAGCTGGCCTGCCCCAC...TGGTCCCACCCCATCGACCTGCACTTCGCCACCAAAGGTCTTCAAGGCTGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594416.1
CDS-3UTR CCA 90 bp TTGACCACTGTGCCATCCTCCCCCATCACTGGGTGTCCGGGGTGTGGATGGTGGGTGGGGCAGGCCAGCTaGTGGGTGCCCGGGCTACTG +
Preference number: 4 (lower is better)
Translates to: LTTVPSSPITGCPGCGWWVGQAS*WVPGLL
Trigger: CAGTAGCCCGGGCACCCACCAGCTGGCCTGCCCCAC...CCACCATCCACACCCCGGACACCCAGTGATGGGGGAGGATGGCACAGTGGTCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR GCA 90 bp GCCACCAGCAGCTGTGTGCAGGCGATAGCGGTCGGCCCCACTGTAGATGGTGTCTGCGGGGTGTCCACTTaGGTTTGGCCCTCCCGCACG +
Preference number: 4 (lower is better)
Translates to: ATSSCVQAIAVGPTVDGVCGVST*VWPSRT
Trigger: CGTGCGGGAGGGCCAAACGCAAGTGGACACCCCGCA...GACACCATCTACAGTGGGGCCGACCGCTATCGCCTGCACACAGCTGCTGGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594416.1
CDS-3UTR GCA 90 bp TCTCCAGGTGCACGGTGCCACCAGCAGCTGTGTGCAGGCGATAGCGGTCGGCCCCGTAGCGGTCGAAGTTaGGGAGCAGCAGGCCGATCT +
Preference number: 4 (lower is better)
Translates to: SPGARCHQQLCAGDSGRPRSGRS*GAAGRS
Trigger: AGATCGGCCTGCTGCTCCGCAACTTCGACCGCTACG...GGGCCGACCGCTATCGCCTGCACACAGCTGCTGGTGGCACCGTGCACCTGGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594416.1
CDS-3UTR CCA 90 bp CTGCGGCCCACCACCCACGAAAGCCCGTGCCAACTGTTCTCGCCAACTGCCCAGGTGTCCACTTGCGTTTaGCCCTCCCGCACGCCTGAC +
Preference number: 4 (lower is better)
Translates to: LRPTTHESPCQLFSPTAQVSTCV*PSRTPD
Trigger: GTCAGGCGTGCGGGAGGGCCAAACGCAAGTGGACAC...CTGGGCAGTTGGCGAGAACAGTTGGCACGGGCTTTCGTGGGTGGTGGGCCGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594416.1
CDS-3UTR CCA 90 bp CGATCTCCAGGTGCACGGTGCCACCAGCAGCTGTGTGCAGGCGATAGCGGTCGGTCCTGGGACCACACCTaGAAATGGAGCCGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: RSPGARCHQQLCAGDSGRSWDHT*KWSRGQ
Trigger: CTGGCCCCGGCTCCATTTCCAGGTGTGGTCCCAGGA...CCGACCGCTATCGCCTGCACACAGCTGCTGGTGGCACCGTGCACCTGGAGATCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594416.1
CDS-3UTR GCA 90 bp GCAGAGTCCCTCAGCACTCCACGCCGTAGCGGTCGAAGTTGCGGAGCAGCAGGCCAGGACCCGCCTGGCTaGGAGATATGTAAGCCGCGA +
Preference number: 4 (lower is better)
Translates to: AESLSTPRRSGRSCGAAGQDPPG*EICKPR
Trigger: TCGCGGCTTACATATCTCGCAGCCAGGCGGGTCCTG...GCCTGCTGCTCCGCAACTTCGACCGCTACGGCGTGGAGTGCTGAGGGACTCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594416.1
CDS-3UTR GCA 90 bp TGTGCCATCCTCCCCCATCACTGGGTGTCCGGGGTGTGGATGGTGGTGACGTTGAGGCCAGCTGGTGGGTaGCCGGGCTACTGGGCACAT +
Preference number: 4 (lower is better)
Translates to: CAILPHHWVSGVWMVVTLRPAGG*PGYWAH
Trigger: ATGTGCCCAGTAGCCCGGGCACCCACCAGCTGGCCT...CAACGTCACCACCATCCACACCCCGGACACCCAGTGATGGGGGAGGATGGCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR GCA 90 bp CACGGTGCCACCAGCAGCTGTGTGCAGGCGATAGCGGTCGGCCCCACTGTAGATTCCCCATGCAGCAGCTaGGGCCCACCACCCACGAAA +
Preference number: 4 (lower is better)
Translates to: HGATSSCVQAIAVGPTVDSPCSS*GPPPTK
Trigger: TTTCGTGGGTGGTGGGCCGCAGCTGCTGCATGGGGA...ATCTACAGTGGGGCCGACCGCTATCGCCTGCACACAGCTGCTGGTGGCACCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594416.1
CDS-3UTR GCA 90 bp ACTCCACGCCGTAGCGGTCGAAGTTGCGGAGCAGCAGGCCGATCTCCAGGTGCAAGGCCGATCTCCAGGTaGACGGTGCCACCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: TPRRSGRSCGAAGRSPGARPISR*TVPPAA
Trigger: AGCTGCTGGTGGCACCGTGCACCTGGAGATCGGCCT...TGCACCTGGAGATCGGCCTGCTGCTCCGCAACTTCGACCGCTACGGCGTGGAGT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594416.1
CDS-3UTR CCA 90 bp CATCCTCCCCCATCACTGGGTGTCCGGGGTGTGGATGGTGGTGACGTTGGAGGCGTGTCCACTTGCGTTTaGCCCTCCCGCACGCCTGAC +
Preference number: 4 (lower is better)
Translates to: HPPPSLGVRGVDGGDVGGVSTCV*PSRTPD
Trigger: GTCAGGCGTGCGGGAGGGCCAAACGCAAGTGGACAC...GCCTCCAACGTCACCACCATCCACACCCCGGACACCCAGTGATGGGGGAGGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR CCA 90 bp GGCCCACCACCCACGAAAGCCCGTGCCAACTGTTCTCGCCAACTGCCCAGGGGCCGACCGCGCTCGTCTTaGTTTCCGTGGTTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: GPPPTKARANCSRQLPRGRPRSS*FPWLLL
Trigger: CAGCAACAACCACGGAAACCAAGACGAGCGCGGTCG...GCCCCTGGGCAGTTGGCGAGAACAGTTGGCACGGGCTTTCGTGGGTGGTGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594416.1
CDS-3UTR CCA 90 bp CCCGAGGTCCTAGAAAGGACAGAAGCGGTGCCATGCCTTAGCTGGGGTCAGCTCCGCCCGAAGGGGCTATaGCTCCGCCCACGAGCGCAA +
Preference number: 4 (lower is better)
Translates to: PEVLERTEAVPCLSWGQLRPKGL*LRPRAQ
Trigger: TTGCGCTCGTGGGCGGAGCCATAGCCCCTTCGGGCG...GAGCTGACCCCAGCTAAGGCATGGCACCGCTTCTGTCCTTTCTAGGACCTCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675972.1
CDS-3UTR TCA 90 bp CACGGTGCCACCAGCAGCTGTGTGCAGGCGATAGCGGTCGGCCCCACTGTAGATAACCGCTGGCCCCTATaGTCTGCCCGATCACGTGCA +
Preference number: 4 (lower is better)
Translates to: HGATSSCVQAIAVGPTVDNRWPL*SARSRA
Trigger: TGCACGTGATCGGGCAGATCATAGGGGCCAGCGGTT...ATCTACAGTGGGGCCGACCGCTATCGCCTGCACACAGCTGCTGGTGGCACCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594416.1
CDS-3UTR TCA 90 bp CTGTGCCATCCTCCCCCATCACTGGGTGTCCGGGGTGTGGATGGTGGTGACGTTAGCCGGGGCCAGCCTTaGAGACCTTTGGTGGCGAAG +
Preference number: 4 (lower is better)
Translates to: LCHPPPSLGVRGVDGGDVSRGQP*RPLVAK
Trigger: CTTCGCCACCAAAGGTCTTCAAGGCTGGCCCCGGCT...AACGTCACCACCATCCACACCCCGGACACCCAGTGATGGGGGAGGATGGCACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR TCA 90 bp TTGACCACTGTGCCATCCTCCCCCATCACTGGGTGTCCGGGGTGTGGATGGTGGAGCCGGGGCCAGCCTTaGAGACCTTTGGTGGCGAAG +
Preference number: 4 (lower is better)
Translates to: LTTVPSSPITGCPGCGWWSRGQP*RPLVAK
Trigger: CTTCGCCACCAAAGGTCTTCAAGGCTGGCCCCGGCT...CCACCATCCACACCCCGGACACCCAGTGATGGGGGAGGATGGCACAGTGGTCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR GCA 90 bp GGGAAACTGGGCCCAGAGGGACCCCGAGGTCCTAGAAAGGACAGAAGCGGTGCCCAGGACCCGCCTGGCTaGGAGATATGTAAGCCGCGA +
Preference number: 4 (lower is better)
Translates to: GKLGPEGPRGPRKDRSGAQDPPG*EICKPR
Trigger: TCGCGGCTTACATATCTCGCAGCCAGGCGGGTCCTG...GGCACCGCTTCTGTCCTTTCTAGGACCTCGGGGTCCCTCTGGGCCCAGTTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243578.8
CDS-3UTR GCA 90 bp GCAGAGTCCCTCAGCACTCCACGCCGTAGCGGTCGAAGTTGCGGAGCAGCAGGCCTGGCCCCTATGATCTaGCCGATCACGTGCACCTCA +
Preference number: 4 (lower is better)
Translates to: AESLSTPRRSGRSCGAAGLAPMI*PITCTS
Trigger: TGAGGTGCACGTGATCGGGCAGATCATAGGGGCCAG...GCCTGCTGCTCCGCAACTTCGACCGCTACGGCGTGGAGTGCTGAGGGACTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594416.1
CDS-3UTR GCA 90 bp AGAGTCTGTGCTCTTGACCACTGTGCCATCCTCCCCCATCACTGGGTGTCCGGGTGCGGGGTGTCCACTTaGGTTTGGCCCTCCCGCACG +
Preference number: 4 (lower is better)
Translates to: RVCALDHCAILPHHWVSGCGVST*VWPSRT
Trigger: CGTGCGGGAGGGCCAAACGCAAGTGGACACCCCGCA...CCCGGACACCCAGTGATGGGGGAGGATGGCACAGTGGTCAAGAGCACAGACTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR GCA 90 bp AGCGGTCGAAGTTGCGGAGCAGCAGGCCGATCTCCAGGTGCACGGTGCCACCAGGCCATGTCCCCTATCTaGGGGGTGTCCACTTGCGTT +
Preference number: 4 (lower is better)
Translates to: SGRSCGAAGRSPGARCHQAMSPI*GVSTCV
Trigger: AACGCAAGTGGACACCCCGCAGATAGGGGACATGGC...CTGGTGGCACCGTGCACCTGGAGATCGGCCTGCTGCTCCGCAACTTCGACCGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594416.1
CDS-3UTR GCA 90 bp CCCGAGGTCCTAGAAAGGACAGAAGCGGTGCCATGCCTTAGCTGGGGTCAGCTCACTGTTCTCGCCAACTaGCCAGGGGCCGCCACGTGG +
Preference number: 4 (lower is better)
Translates to: PEVLERTEAVPCLSWGQLTVLAN*PGAATW
Trigger: CCACGTGGCGGCCCCTGGGCAGTTGGCGAGAACAGT...GAGCTGACCCCAGCTAAGGCATGGCACCGCTTCTGTCCTTTCTAGGACCTCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR GCA 90 bp AGAGTCTGTGCTCTTGACCACTGTGCCATCCTCCCCCATCACTGGGTGTCCGGGACTGTTCTCGCCAACTaGCCAGGGGCCGCCACGTGG +
Preference number: 4 (lower is better)
Translates to: RVCALDHCAILPHHWVSGTVLAN*PGAATW
Trigger: CCACGTGGCGGCCCCTGGGCAGTTGGCGAGAACAGT...CCCGGACACCCAGTGATGGGGGAGGATGGCACAGTGGTCAAGAGCACAGACTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR GCA 90 bp CGCCGTAGCGGTCGAAGTTGCGGAGCAGCAGGCCGATCTCCAGGTGCACGGTGCACCCACGAAAGCCCGTaGCAACTGTTCTCGCCAACT +
Preference number: 4 (lower is better)
Translates to: RRSGRSCGAAGRSPGARCTHESP*QLFSPT
Trigger: AGTTGGCGAGAACAGTTGGCACGGGCTTTCGTGGGT...GCACCGTGCACCTGGAGATCGGCCTGCTGCTCCGCAACTTCGACCGCTACGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594416.1
CDS-3UTR GCA 90 bp TTGACCACTGTGCCATCCTCCCCCATCACTGGGTGTCCGGGGTGTGGATGGTGGTCCCCATGCAGCAGCTaGGGCCCACCACCCACGAAA +
Preference number: 4 (lower is better)
Translates to: LTTVPSSPITGCPGCGWWSPCSS*GPPPTK
Trigger: TTTCGTGGGTGGTGGGCCGCAGCTGCTGCATGGGGA...CCACCATCCACACCCCGGACACCCAGTGATGGGGGAGGATGGCACAGTGGTCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR GCA 90 bp CTGTGCCATCCTCCCCCATCACTGGGTGTCCGGGGTGTGGATGGTGGTGACGTTTCCCCATGCAGCAGCTaGGGCCCACCACCCACGAAA +
Preference number: 4 (lower is better)
Translates to: LCHPPPSLGVRGVDGGDVSPCSS*GPPPTK
Trigger: TTTCGTGGGTGGTGGGCCGCAGCTGCTGCATGGGGA...AACGTCACCACCATCCACACCCCGGACACCCAGTGATGGGGGAGGATGGCACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR CCA 90 bp TGTGCCATCCTCCCCCATCACTGGGTGTCCGGGGTGTGGATGGTGGTGACGTTGGTGTCCACTTGCGTTTaGCCCTCCCGCACGCCTGAC +
Preference number: 4 (lower is better)
Translates to: CAILPHHWVSGVWMVVTLVSTCV*PSRTPD
Trigger: GTCAGGCGTGCGGGAGGGCCAAACGCAAGTGGACAC...CAACGTCACCACCATCCACACCCCGGACACCCAGTGATGGGGGAGGATGGCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR CCA 90 bp TGCGGCCCACCACCCACGAAAGCCCGTGCCAACTGTTCTCGCCAACTGCCCAGGCGGCCAAAGCTGTCCTaGGACCACACCTGGAAATGG +
Preference number: 4 (lower is better)
Translates to: CGPPPTKARANCSRQLPRRPKLS*DHTWKW
Trigger: CCATTTCCAGGTGTGGTCCCAGGACAGCTTTGGCCG...CCTGGGCAGTTGGCGAGAACAGTTGGCACGGGCTTTCGTGGGTGGTGGGCCGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594416.1
CDS-3UTR TCA 90 bp CGAAAGCCCGTGCCAACTGTTCTCGCCAACTGCCCAGGGGCCGCCACGTGGGGCTGTAGTTCATGGGCTTaGCTGCTTCTTTTCTCCGCG +
Preference number: 4 (lower is better)
Translates to: RKPVPTVLANCPGAATWGCSSWA*LLLFSA
Trigger: CGCGGAGAAAAGAAGCAGTCAAGCCCATGAACTACA...GCCCCACGTGGCGGCCCCTGGGCAGTTGGCGAGAACAGTTGGCACGGGCTTTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000594416.1
CDS-3UTR TCA 90 bp TGTGCCATCCTCCCCCATCACTGGGTGTCCGGGGTGTGGATGGTGGTGACGTTGAACCGCTGGCCCCTATaGTCTGCCCGATCACGTGCA +
Preference number: 4 (lower is better)
Translates to: CAILPHHWVSGVWMVVTLNRWPL*SARSRA
Trigger: TGCACGTGATCGGGCAGATCATAGGGGCCAGCGGTT...CAACGTCACCACCATCCACACCCCGGACACCCAGTGATGGGGGAGGATGGCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR TCA 90 bp CGATCTCCAGGTGCACGGTGCCACCAGCAGCTGTGTGCAGGCGATAGCGGTCGGGACCCTGTCTCTGTGTaGATGCCCCACTTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: RSPGARCHQQLCAGDSGRDPVSV*MPHLQK
Trigger: CTTCTGCAAGTGGGGCATTCACACAGAGACAGGGTC...CCGACCGCTATCGCCTGCACACAGCTGCTGGTGGCACCGTGCACCTGGAGATCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594416.1
CDS-3UTR GCA 90 bp CATCCTCCCCCATCACTGGGTGTCCGGGGTGTGGATGGTGGTGACGTTGGAGGCATCTGCCCGATCACGTaGACCTCAGCCATGGCCCTT +
Preference number: 4 (lower is better)
Translates to: HPPPSLGVRGVDGGDVGGICPIT*TSAMAL
Trigger: AAGGGCCATGGCTGAGGTGCACGTGATCGGGCAGAT...GCCTCCAACGTCACCACCATCCACACCCCGGACACCCAGTGATGGGGGAGGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR GCA 90 bp CATCCTCCCCCATCACTGGGTGTCCGGGGTGTGGATGGTGGTGACGTTGGAGGCCTGGCCCCTATGATCTaGCCGATCACGTGCACCTCA +
Preference number: 4 (lower is better)
Translates to: HPPPSLGVRGVDGGDVGGLAPMI*PITCTS
Trigger: TGAGGTGCACGTGATCGGGCAGATCATAGGGGCCAG...GCCTCCAACGTCACCACCATCCACACCCCGGACACCCAGTGATGGGGGAGGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR GCA 90 bp CTGTGCCATCCTCCCCCATCACTGGGTGTCCGGGGTGTGGATGGTGGTGACGTTCCTTTGGTGGCGAAGTaGAGGTCGATGGGGTGGGAC +
Preference number: 4 (lower is better)
Translates to: LCHPPPSLGVRGVDGGDVPLVAK*RSMGWD
Trigger: GTCCCACCCCATCGACCTGCACTTCGCCACCAAAGG...AACGTCACCACCATCCACACCCCGGACACCCAGTGATGGGGGAGGATGGCACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR GCA 90 bp GGGCCAGCCTTGAAGACCTTTGGTGGCGAAGTGCAGGTCGATGGGGTGGGACCACCTTTGGTGGCGAAGTaGAGGTCGATGGGGTGGGAC +
Preference number: 4 (lower is better)
Translates to: GPALKTFGGEVQVDGVGPPLVAK*RSMGWD
Trigger: GTCCCACCCCATCGACCTGCACTTCGCCACCAAAGG...TGGTCCCACCCCATCGACCTGCACTTCGCCACCAAAGGTCTTCAAGGCTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594416.1
CDS-3UTR GCA 90 bp TGTGCAGGCGATAGCGGTCGGCCCCACTGTAGATGGTGTCCCCATGCAGCAGCTTCTCCAGGTGCACGGTaGCACCAGCAGCTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: CAGDSGRPHCRWCPHAAASPGAR*HQQLCA
Trigger: TGCACACAGCTGCTGGTGGCACCGTGCACCTGGAGA...AGCTGCTGCATGGGGACACCATCTACAGTGGGGCCGACCGCTATCGCCTGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594416.1
CDS-3UTR GCA 90 bp GACCCCGAGGTCCTAGAAAGGACAGAAGCGGTGCCATGCCTTAGCTGGGGTCAGAGGCCGATCTCCAGGTaGACGGTGCCACCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: DPEVLERTEAVPCLSWGQRPISR*TVPPAA
Trigger: AGCTGCTGGTGGCACCGTGCACCTGGAGATCGGCCT...CTGACCCCAGCTAAGGCATGGCACCGCTTCTGTCCTTTCTAGGACCTCGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR GCA 90 bp AGGGACCCCGAGGTCCTAGAAAGGACAGAAGCGGTGCCATGCCTTAGCTGGGGTAGGCCGATCTCCAGGTaGACGGTGCCACCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: RDPEVLERTEAVPCLSWGRPISR*TVPPAA
Trigger: AGCTGCTGGTGGCACCGTGCACCTGGAGATCGGCCT...ACCCCAGCTAAGGCATGGCACCGCTTCTGTCCTTTCTAGGACCTCGGGGTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR CCA 90 bp GGGAAACTGGGCCCAGAGGGACCCCGAGGTCCTAGAAAGGACAGAAGCGGTGCCCGTGCACCTCAGCCATaGCCCTTAGCGCACTTAACG +
Preference number: 4 (lower is better)
Translates to: GKLGPEGPRGPRKDRSGARAPQP*PLAHLT
Trigger: CGTTAAGTGCGCTAAGGGCCATGGCTGAGGTGCACG...GGCACCGCTTCTGTCCTTTCTAGGACCTCGGGGTCCCTCTGGGCCCAGTTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243578.8
CDS-3UTR CCA 90 bp ACTCCACGCCGTAGCGGTCGAAGTTGCGGAGCAGCAGGCCGATCTCCAGGTGCACGTGCACCTCAGCCATaGCCCTTAGCGCACTTAACG +
Preference number: 4 (lower is better)
Translates to: TPRRSGRSCGAAGRSPGARAPQP*PLAHLT
Trigger: CGTTAAGTGCGCTAAGGGCCATGGCTGAGGTGCACG...TGCACCTGGAGATCGGCCTGCTGCTCCGCAACTTCGACCGCTACGGCGTGGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594416.1
CDS-3UTR CCA 90 bp TGTAGATGGTGTCCCCATGCAGCAGCTGCGGCCCACCACCCACGAAAGCCCGTGCGAAGTGCAGGTCGATaGGGTGGGACCAGTAAGCCA +
Preference number: 4 (lower is better)
Translates to: CRWCPHAAAAAHHPRKPVRSAGR*GGTSKP
Trigger: TGGCTTACTGGTCCCACCCCATCGACCTGCACTTCG...CACGGGCTTTCGTGGGTGGTGGGCCGCAGCTGCTGCATGGGGACACCATCTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594416.1
CDS-3UTR CCA 90 bp GGGAAACTGGGCCCAGAGGGACCCCGAGGTCCTAGAAAGGACAGAAGCGGTGCCCGAAGTGCAGGTCGATaGGGTGGGACCAGTAAGCCA +
Preference number: 4 (lower is better)
Translates to: GKLGPEGPRGPRKDRSGARSAGR*GGTSKP
Trigger: TGGCTTACTGGTCCCACCCCATCGACCTGCACTTCG...GGCACCGCTTCTGTCCTTTCTAGGACCTCGGGGTCCCTCTGGGCCCAGTTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR CCA 90 bp GCGATAGCGGTCGGCCCCACTGTAGATGGTGTCCCCATGCAGCAGCTGCGGCCCCTTGAAGACCTTTGGTaGCGAAGTGCAGGTCGATGG +
Preference number: 4 (lower is better)
Translates to: AIAVGPTVDGVPMQQLRPLEDLW*RSAGRW
Trigger: CCATCGACCTGCACTTCGCCACCAAAGGTCTTCAAG...GGGCCGCAGCTGCTGCATGGGGACACCATCTACAGTGGGGCCGACCGCTATCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000594416.1
CDS-3UTR CCA 90 bp GGGAAACTGGGCCCAGAGGGACCCCGAGGTCCTAGAAAGGACAGAAGCGGTGCCCGGCCAAAGCTGTCCTaGGACCACACCTGGAAATGG +
Preference number: 4 (lower is better)
Translates to: GKLGPEGPRGPRKDRSGARPKLS*DHTWKW
Trigger: CCATTTCCAGGTGTGGTCCCAGGACAGCTTTGGCCG...GGCACCGCTTCTGTCCTTTCTAGGACCTCGGGGTCCCTCTGGGCCCAGTTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR CCA 90 bp GCCACCAGCAGCTGTGTGCAGGCGATAGCGGTCGGCCCCACTGTAGATGGTGTCGGGTGCCCGGGCTACTaGGCACATGGCAAAATCCAT +
Preference number: 4 (lower is better)
Translates to: ATSSCVQAIAVGPTVDGVGCPGY*AHGKIH
Trigger: ATGGATTTTGCCATGTGCCCAGTAGCCCGGGCACCC...GACACCATCTACAGTGGGGCCGACCGCTATCGCCTGCACACAGCTGCTGGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594416.1
CDS-3UTR CCA 90 bp TTGACCACTGTGCCATCCTCCCCCATCACTGGGTGTCCGGGGTGTGGATGGTGGTGGGTGTCCGGGGTGTaGATGGTGGTGACGTTGGAG +
Preference number: 4 (lower is better)
Translates to: LTTVPSSPITGCPGCGWWWVSGV*MVVTLE
Trigger: CTCCAACGTCACCACCATCCACACCCCGGACACCCA...CCACCATCCACACCCCGGACACCCAGTGATGGGGGAGGATGGCACAGTGGTCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR CCA 90 bp CTGTGCCATCCTCCCCCATCACTGGGTGTCCGGGGTGTGGATGGTGGTGACGTTATCCTCCCCCATCACTaGGTGTCCGGGGTGTGGATG +
Preference number: 4 (lower is better)
Translates to: LCHPPPSLGVRGVDGGDVILPHH*VSGVWM
Trigger: CATCCACACCCCGGACACCCAGTGATGGGGGAGGAT...AACGTCACCACCATCCACACCCCGGACACCCAGTGATGGGGGAGGATGGCACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR TCA 90 bp AGAGTCTGTGCTCTTGACCACTGTGCCATCCTCCCCCATCACTGGGTGTCCGGGCATGCCGCCCCTGTGTaGATGCCCCACTTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: RVCALDHCAILPHHWVSGHAAPV*MPHLQK
Trigger: CTTCTGCAAGTGGGGCATTCACACAGGGGCGGCATG...CCCGGACACCCAGTGATGGGGGAGGATGGCACAGTGGTCAAGAGCACAGACTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR GCA 90 bp TCCCCATGCAGCAGCTGCGGCCCACCACCCACGAAAGCCCGTGCCAACTGTTCTGTTCATGGGCTTGACTaGTTCTTTTCTCCGCGGGCG +
Preference number: 4 (lower is better)
Translates to: SPCSSCGPPPTKARANCSVHGLD*FFSPRA
Trigger: CGCCCGCGGAGAAAAGAAGCAGTCAAGCCCATGAAC...AGAACAGTTGGCACGGGCTTTCGTGGGTGGTGGGCCGCAGCTGCTGCATGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594416.1
CDS-3UTR GCA 90 bp GCACGGTGCCACCAGCAGCTGTGTGCAGGCGATAGCGGTCGGCCCCACTGTAGAGCAAAATCCATAGCCTaGAAGCTGGCAGCGGCCAAA +
Preference number: 4 (lower is better)
Translates to: ARCHQQLCAGDSGRPHCRAKSIA*KLAAAK
Trigger: TTTGGCCGCTGCCAGCTTGCAGGCTATGGATTTTGC...TCTACAGTGGGGCCGACCGCTATCGCCTGCACACAGCTGCTGGTGGCACCGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594416.1
CDS-3UTR GCA 90 bp GACCCCGAGGTCCTAGAAAGGACAGAAGCGGTGCCATGCCTTAGCTGGGGTCAGTCTCCAGGTGCACGGTaGCACCAGCAGCTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: DPEVLERTEAVPCLSWGQSPGAR*HQQLCA
Trigger: TGCACACAGCTGCTGGTGGCACCGTGCACCTGGAGA...CTGACCCCAGCTAAGGCATGGCACCGCTTCTGTCCTTTCTAGGACCTCGGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR CCA 90 bp TGTGCCATCCTCCCCCATCACTGGGTGTCCGGGGTGTGGATGGTGGTGACGTTGCGAAGTGCAGGTCGATaGGGTGGGACCAGTAAGCCA +
Preference number: 4 (lower is better)
Translates to: CAILPHHWVSGVWMVVTLRSAGR*GGTSKP
Trigger: TGGCTTACTGGTCCCACCCCATCGACCTGCACTTCG...CAACGTCACCACCATCCACACCCCGGACACCCAGTGATGGGGGAGGATGGCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR CCA 90 bp TTGACCACTGTGCCATCCTCCCCCATCACTGGGTGTCCGGGGTGTGGATGGTGGCGTGCACCTCAGCCATaGCCCTTTTCGGGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: LTTVPSSPITGCPGCGWWRAPQP*PFSGSG
Trigger: ACCTGAACCCGAAAAGGGCCATGGCTGAGGTGCACG...CCACCATCCACACCCCGGACACCCAGTGATGGGGGAGGATGGCACAGTGGTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000675972.1
CDS-3UTR TCA 90 bp CCTGCGACCCCATACATTTACTGTCCCCAATTTACAGATAGGGAAACTGGGCCCGCCCTCCCGCACGCCTaGCAGGAGCTTCCATGCCGC +
Preference number: 4 (lower is better)
Translates to: PATPYIYCPQFTDRETGPALPHA*QELPCR
Trigger: GCGGCATGGAAGCTCCTGTCAGGCGTGCGGGAGGGC...GGGCCCAGTTTCCCTATCTGTAAATTGGGGACAGTAAATGTATGGGGTCGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR GCA 90 bp TTGACCACTGTGCCATCCTCCCCCATCACTGGGTGTCCGGGGTGTGGATGGTGGGTTCATGGGCTTGACTaGTTCTTTTCTCCGCGGGCG +
Preference number: 4 (lower is better)
Translates to: LTTVPSSPITGCPGCGWWVHGLD*FFSPRA
Trigger: CGCCCGCGGAGAAAAGAAGCAGTCAAGCCCATGAAC...CCACCATCCACACCCCGGACACCCAGTGATGGGGGAGGATGGCACAGTGGTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000243578.8
CDS-3UTR GCA 90 bp AGAGTCTGTGCTCTTGACCACTGTGCCATCCTCCCCCATCACTGGGTGTCCGGGCTGGCCCCTATGATCTaGCCGATCACGTGCACCTCA +
Preference number: 4 (lower is better)
Translates to: RVCALDHCAILPHHWVSGLAPMI*PITCTS
Trigger: TGAGGTGCACGTGATCGGGCAGATCATAGGGGCCAG...CCCGGACACCCAGTGATGGGGGAGGATGGCACAGTGGTCAAGAGCACAGACTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR GCA 90 bp TGTAGATGGTGTCCCCATGCAGCAGCTGCGGCCCACCACCCACGAAAGCCCGTGCTGTCTCTGTGTGAATaGCCCACTTGCAGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: CRWCPHAAAAAHHPRKPVLSLCE*PTCRRG
Trigger: GCCTCTTCTGCAAGTGGGGCATTCACACAGAGACAG...CACGGGCTTTCGTGGGTGGTGGGCCGCAGCTGCTGCATGGGGACACCATCTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594416.1
CDS-3UTR CCA 90 bp TGTAGATGGTGTCCCCATGCAGCAGCTGCGGCCCACCACCCACGAAAGCCCGTGAGCCTTGAAGACCTTTaGTGGCGAAGTGCAGGTCGA +
Preference number: 4 (lower is better)
Translates to: CRWCPHAAAAAHHPRKPVSLEDL*WRSAGR
Trigger: TCGACCTGCACTTCGCCACCAAAGGTCTTCAAGGCT...CACGGGCTTTCGTGGGTGGTGGGCCGCAGCTGCTGCATGGGGACACCATCTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594416.1
CDS-3UTR CCA 90 bp AGAGTCTGTGCTCTTGACCACTGTGCCATCCTCCCCCATCACTGGGTGTCCGGGCGGCCAAAGCTGTCCTaGGACCACACCTGGAAATGG +
Preference number: 4 (lower is better)
Translates to: RVCALDHCAILPHHWVSGRPKLS*DHTWKW
Trigger: CCATTTCCAGGTGTGGTCCCAGGACAGCTTTGGCCG...CCCGGACACCCAGTGATGGGGGAGGATGGCACAGTGGTCAAGAGCACAGACTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR CCA 90 bp GACCCCGAGGTCCTAGAAAGGACAGAAGCGGTGCCATGCCTTAGCTGGGGTCAGGGGTGCCCGGGCTACTaGGCACATGGCAAAATCCAT +
Preference number: 4 (lower is better)
Translates to: DPEVLERTEAVPCLSWGQGCPGY*AHGKIH
Trigger: ATGGATTTTGCCATGTGCCCAGTAGCCCGGGCACCC...CTGACCCCAGCTAAGGCATGGCACCGCTTCTGTCCTTTCTAGGACCTCGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR CCA 90 bp AAATCCATAGCCTGCAAGCTGGCAGCGGCCAAAGCTGTCCTGGGACCACACCTGCGGCCCCACTGTAGATaGTGTCCCCATGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: KSIACKLAAAKAVLGPHLRPHCR*CPHAAA
Trigger: AGCTGCTGCATGGGGACACCATCTACAGTGGGGCCG...CAGGTGTGGTCCCAGGACAGCTTTGGCCGCTGCCAGCTTGCAGGCTATGGATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594416.1
CDS-3UTR TCA 90 bp GGGAAACTGGGCCCAGAGGGACCCCGAGGTCCTAGAAAGGACAGAAGCGGTGCCTGTAGTTCATGGGCTTaGCTGCTTCTTTTCTCCGCG +
Preference number: 4 (lower is better)
Translates to: GKLGPEGPRGPRKDRSGACSSWA*LLLFSA
Trigger: CGCGGAGAAAAGAAGCAGTCAAGCCCATGAACTACA...GGCACCGCTTCTGTCCTTTCTAGGACCTCGGGGTCCCTCTGGGCCCAGTTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000243578.8
CDS-3UTR GCA 90 bp TGTAGATGGTGTCCCCATGCAGCAGCTGCGGCCCACCACCCACGAAAGCCCGTGTGTGAATGCCCCACTTaGAGAAGAGGCTACTTTCCG +
Preference number: 4 (lower is better)
Translates to: CRWCPHAAAAAHHPRKPVCECPT*RRGYFP
Trigger: CGGAAAGTAGCCTCTTCTGCAAGTGGGGCATTCACA...CACGGGCTTTCGTGGGTGGTGGGCCGCAGCTGCTGCATGGGGACACCATCTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594416.1
CDS-3UTR GCA 90 bp TGTGCCATCCTCCCCCATCACTGGGTGTCCGGGGTGTGGATGGTGGTGACGTTGGCAAAATCCATAGCCTaGAAGCTGGCAGCGGCCAAA +
Preference number: 4 (lower is better)
Translates to: CAILPHHWVSGVWMVVTLAKSIA*KLAAAK
Trigger: TTTGGCCGCTGCCAGCTTGCAGGCTATGGATTTTGC...CAACGTCACCACCATCCACACCCCGGACACCCAGTGATGGGGGAGGATGGCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR GCA 90 bp CTGTGCCATCCTCCCCCATCACTGGGTGTCCGGGGTGTGGATGGTGGTGACGTTGCAAAATCCATAGCCTaGAAGCTGGCAGCGGCCAAA +
Preference number: 4 (lower is better)
Translates to: LCHPPPSLGVRGVDGGDVAKSIA*KLAAAK
Trigger: TTTGGCCGCTGCCAGCTTGCAGGCTATGGATTTTGC...AACGTCACCACCATCCACACCCCGGACACCCAGTGATGGGGGAGGATGGCACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR GCA 90 bp AGAGTCTGTGCTCTTGACCACTGTGCCATCCTCCCCCATCACTGGGTGTCCGGGACCCACGAAAGCCCGTaGCAACTGTTCTCGCCAACT +
Preference number: 4 (lower is better)
Translates to: RVCALDHCAILPHHWVSGTHESP*QLFSPT
Trigger: AGTTGGCGAGAACAGTTGGCACGGGCTTTCGTGGGT...CCCGGACACCCAGTGATGGGGGAGGATGGCACAGTGGTCAAGAGCACAGACTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR GCA 90 bp GACCCCGAGGTCCTAGAAAGGACAGAAGCGGTGCCATGCCTTAGCTGGGGTCAGACCCACGAAAGCCCGTaGCAACTGTTCTCGCCAACT +
Preference number: 4 (lower is better)
Translates to: DPEVLERTEAVPCLSWGQTHESP*QLFSPT
Trigger: AGTTGGCGAGAACAGTTGGCACGGGCTTTCGTGGGT...CTGACCCCAGCTAAGGCATGGCACCGCTTCTGTCCTTTCTAGGACCTCGGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR CCA 90 bp TTGACCACTGTGCCATCCTCCCCCATCACTGGGTGTCCGGGGTGTGGATGGTGGCTTGAAGACCTTTGGTaGCGAAGTGCAGGTCGATGG +
Preference number: 4 (lower is better)
Translates to: LTTVPSSPITGCPGCGWWLEDLW*RSAGRW
Trigger: CCATCGACCTGCACTTCGCCACCAAAGGTCTTCAAG...CCACCATCCACACCCCGGACACCCAGTGATGGGGGAGGATGGCACAGTGGTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR CCA 90 bp TTGACCACTGTGCCATCCTCCCCCATCACTGGGTGTCCGGGGTGTGGATGGTGGAGCCTTGAAGACCTTTaGTGGCGAAGTGCAGGTCGA +
Preference number: 4 (lower is better)
Translates to: LTTVPSSPITGCPGCGWWSLEDL*WRSAGR
Trigger: TCGACCTGCACTTCGCCACCAAAGGTCTTCAAGGCT...CCACCATCCACACCCCGGACACCCAGTGATGGGGGAGGATGGCACAGTGGTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR CCA 90 bp CAGCAGCTGTGTGCAGGCGATAGCGGTCGGCCCCACTGTAGATGGTGTCCCCATTCGTCTTGGTTTCCGTaGTTGTTGCTGGGGCAACAG +
Preference number: 4 (lower is better)
Translates to: QQLCAGDSGRPHCRWCPHSSWFP*LLLGQQ
Trigger: CTGTTGCCCCAGCAACAACCACGGAAACCAAGACGA...ATGGGGACACCATCTACAGTGGGGCCGACCGCTATCGCCTGCACACAGCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000594416.1
CDS-3UTR CCA 90 bp GACCCCGAGGTCCTAGAAAGGACAGAAGCGGTGCCATGCCTTAGCTGGGGTCAGCTTGAAGACCTTTGGTaGCGAAGTGCAGGTCGATGG +
Preference number: 4 (lower is better)
Translates to: DPEVLERTEAVPCLSWGQLEDLW*RSAGRW
Trigger: CCATCGACCTGCACTTCGCCACCAAAGGTCTTCAAG...CTGACCCCAGCTAAGGCATGGCACCGCTTCTGTCCTTTCTAGGACCTCGGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR TCA 90 bp GACCCCGAGGTCCTAGAAAGGACAGAAGCGGTGCCATGCCTTAGCTGGGGTCAGATTGCTCTCCTTTACTaGGCACCTCCCATGTGGCTA +
Preference number: 4 (lower is better)
Translates to: DPEVLERTEAVPCLSWGQIALLY*APPMWL
Trigger: TAGCCACATGGGAGGTGCTCAGTAAAGGAGAGCAAT...CTGACCCCAGCTAAGGCATGGCACCGCTTCTGTCCTTTCTAGGACCTCGGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR GCA 90 bp CTGCGACCCCATACATTTACTGTCCCCAATTTACAGATAGGGAAACTGGGCCCAAGGCCAGCTGGTGGGTaGCCGGGCTACTGGGCACAT +
Preference number: 4 (lower is better)
Translates to: LRPHTFTVPNLQIGKLGPRPAGG*PGYWAH
Trigger: ATGTGCCCAGTAGCCCGGGCACCCACCAGCTGGCCT...TGGGCCCAGTTTCCCTATCTGTAAATTGGGGACAGTAAATGTATGGGGTCGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR CCA 90 bp CCTGCGACCCCATACATTTACTGTCCCCAATTTACAGATAGGGAAACTGGGCCCTCCTGGGACCACACCTaGAAATGGAGCCGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: PATPYIYCPQFTDRETGPSWDHT*KWSRGQ
Trigger: CTGGCCCCGGCTCCATTTCCAGGTGTGGTCCCAGGA...GGGCCCAGTTTCCCTATCTGTAAATTGGGGACAGTAAATGTATGGGGTCGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR GCA 90 bp CCTGCGACCCCATACATTTACTGTCCCCAATTTACAGATAGGGAAACTGGGCCCTCTCCAGGTGCACGGTaGCACCAGCAGCTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: PATPYIYCPQFTDRETGPSPGAR*HQQLCA
Trigger: TGCACACAGCTGCTGGTGGCACCGTGCACCTGGAGA...GGGCCCAGTTTCCCTATCTGTAAATTGGGGACAGTAAATGTATGGGGTCGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR CCA 90 bp CCTGCGACCCCATACATTTACTGTCCCCAATTTACAGATAGGGAAACTGGGCCCTGGGTGTCCGGGGTGTaGATGGTGGTGACGTTGGAG +
Preference number: 4 (lower is better)
Translates to: PATPYIYCPQFTDRETGPWVSGV*MVVTLE
Trigger: CTCCAACGTCACCACCATCCACACCCCGGACACCCA...GGGCCCAGTTTCCCTATCTGTAAATTGGGGACAGTAAATGTATGGGGTCGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR CCA 90 bp CCTGCGACCCCATACATTTACTGTCCCCAATTTACAGATAGGGAAACTGGGCCCATCCTCCCCCATCACTaGGTGTCCGGGGTGTGGATG +
Preference number: 4 (lower is better)
Translates to: PATPYIYCPQFTDRETGPILPHH*VSGVWM
Trigger: CATCCACACCCCGGACACCCAGTGATGGGGGAGGAT...GGGCCCAGTTTCCCTATCTGTAAATTGGGGACAGTAAATGTATGGGGTCGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR GCA 90 bp AACACCCTGCGACCCCATACATTTACTGTCCCCAATTTACAGATAGGGAAACTGTGCGGGGTGTCCACTTaGGTTTGGCCCTCCCGCACG +
Preference number: 4 (lower is better)
Translates to: NTLRPHTFTVPNLQIGKLCGVST*VWPSRT
Trigger: CGTGCGGGAGGGCCAAACGCAAGTGGACACCCCGCA...CAGTTTCCCTATCTGTAAATTGGGGACAGTAAATGTATGGGGTCGCAGGGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR GCA 90 bp CTGCGACCCCATACATTTACTGTCCCCAATTTACAGATAGGGAAACTGGGCCCACGTAGCGGTCGAAGTTaGGGAGCAGCAGGCCGATCT +
Preference number: 4 (lower is better)
Translates to: LRPHTFTVPNLQIGKLGPRSGRS*GAAGRS
Trigger: AGATCGGCCTGCTGCTCCGCAACTTCGACCGCTACG...TGGGCCCAGTTTCCCTATCTGTAAATTGGGGACAGTAAATGTATGGGGTCGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR CCA 90 bp CTCAACACCCTGCGACCCCATACATTTACTGTCCCCAATTTACAGATAGGGAAATCCTGGGACCACACCTaGAAATGGAGCCGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: LNTLRPHTFTVPNLQIGKSWDHT*KWSRGQ
Trigger: CTGGCCCCGGCTCCATTTCCAGGTGTGGTCCCAGGA...TTTCCCTATCTGTAAATTGGGGACAGTAAATGTATGGGGTCGCAGGGTGTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR CCA 90 bp CTGCGACCCCATACATTTACTGTCCCCAATTTACAGATAGGGAAACTGGGCCCAGGGTGCCCGGGCTACTaGGCACATGGCAAAATCCAT +
Preference number: 4 (lower is better)
Translates to: LRPHTFTVPNLQIGKLGPGCPGY*AHGKIH
Trigger: ATGGATTTTGCCATGTGCCCAGTAGCCCGGGCACCC...TGGGCCCAGTTTCCCTATCTGTAAATTGGGGACAGTAAATGTATGGGGTCGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR GCA 90 bp CTCAACACCCTGCGACCCCATACATTTACTGTCCCCAATTTACAGATAGGGAAACGTAGCGGTCGAAGTTaGGGAGCAGCAGGCCGATCT +
Preference number: 4 (lower is better)
Translates to: LNTLRPHTFTVPNLQIGKRSGRS*GAAGRS
Trigger: AGATCGGCCTGCTGCTCCGCAACTTCGACCGCTACG...TTTCCCTATCTGTAAATTGGGGACAGTAAATGTATGGGGTCGCAGGGTGTTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR CCA 90 bp AACACCCTGCGACCCCATACATTTACTGTCCCCAATTTACAGATAGGGAAACTGCGGCCCCACTGTAGATaGTGTCCCCATGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: NTLRPHTFTVPNLQIGKLRPHCR*CPHAAA
Trigger: AGCTGCTGCATGGGGACACCATCTACAGTGGGGCCG...CAGTTTCCCTATCTGTAAATTGGGGACAGTAAATGTATGGGGTCGCAGGGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR TCA 90 bp CCTGCGACCCCATACATTTACTGTCCCCAATTTACAGATAGGGAAACTGGGCCCAAGGCGCATGCGTTATaGGTTCAGGTCCGACTTAAC +
Preference number: 4 (lower is better)
Translates to: PATPYIYCPQFTDRETGPKAHAL*VQVRLN
Trigger: GTTAAGTCGGACCTGAACTCATAACGCATGCGCCTT...GGGCCCAGTTTCCCTATCTGTAAATTGGGGACAGTAAATGTATGGGGTCGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675972.1
CDS-3UTR GCA 90 bp CTCAACACCCTGCGACCCCATACATTTACTGTCCCCAATTTACAGATAGGGAAAGCCATGTCCCCTATCTaGGGGGTGTCCACTTGCGTT +
Preference number: 4 (lower is better)
Translates to: LNTLRPHTFTVPNLQIGKAMSPI*GVSTCV
Trigger: AACGCAAGTGGACACCCCGCAGATAGGGGACATGGC...TTTCCCTATCTGTAAATTGGGGACAGTAAATGTATGGGGTCGCAGGGTGTTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR GCA 90 bp CTGCGACCCCATACATTTACTGTCCCCAATTTACAGATAGGGAAACTGGGCCCATGTGAATGCCCCACTTaGAGAAGAGGCTACTTTCCG +
Preference number: 4 (lower is better)
Translates to: LRPHTFTVPNLQIGKLGPCECPT*RRGYFP
Trigger: CGGAAAGTAGCCTCTTCTGCAAGTGGGGCATTCACA...TGGGCCCAGTTTCCCTATCTGTAAATTGGGGACAGTAAATGTATGGGGTCGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR CCA 90 bp AACACCCTGCGACCCCATACATTTACTGTCCCCAATTTACAGATAGGGAAACTGAGCCTTGAAGACCTTTaGTGGCGAAGTGCAGGTCGA +
Preference number: 4 (lower is better)
Translates to: NTLRPHTFTVPNLQIGKLSLEDL*WRSAGR
Trigger: TCGACCTGCACTTCGCCACCAAAGGTCTTCAAGGCT...CAGTTTCCCTATCTGTAAATTGGGGACAGTAAATGTATGGGGTCGCAGGGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR TCA 90 bp AACACCCTGCGACCCCATACATTTACTGTCCCCAATTTACAGATAGGGAAACTGATTGCTCTCCTTTACTaGGCACCTCCCATGTGGCTA +
Preference number: 4 (lower is better)
Translates to: NTLRPHTFTVPNLQIGKLIALLY*APPMWL
Trigger: TAGCCACATGGGAGGTGCTCAGTAAAGGAGAGCAAT...CAGTTTCCCTATCTGTAAATTGGGGACAGTAAATGTATGGGGTCGCAGGGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR GCA 90 bp AACACCCTGCGACCCCATACATTTACTGTCCCCAATTTACAGATAGGGAAACTGTGTGAATGCCCCACTTaGAGAAGAGGCTACTTTCCG +
Preference number: 4 (lower is better)
Translates to: NTLRPHTFTVPNLQIGKLCECPT*RRGYFP
Trigger: CGGAAAGTAGCCTCTTCTGCAAGTGGGGCATTCACA...CAGTTTCCCTATCTGTAAATTGGGGACAGTAAATGTATGGGGTCGCAGGGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS GCA 90 bp GCGCCGACCAGGCCTGGCTCGCGCCTCTCCCAGGACCCGCCTGGCTaGGAGATATGTAAGCCGCGATACTTCCGCGACCGCGCTCGTCTT +
Preference number: 5 (lower is better)
Translates to: APTRPGSRLSQDPPG*EICKPRYFRDRARL
Trigger: AAGACGAGCGCGGTCGCGGAAGTATCGCGGCTTACATATCTCGCAGCCAGGCGGGTCCTGGGAGAGGCGCGAGCCAGGCCTGGTCGGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000594416.1
CDS-3UTR CAA 90 bp CGCCGTAGCGGTCGAAGTTGCGGAGCAGCAGGCCGATCTCCAGGTGCACGGTGCCTGCGGGGTGTCCACTaGCGTTTGGCCCTCCCGCAC +
Preference number: 5 (lower is better)
Translates to: RRSGRSCGAAGRSPGARCLRGVH*RLALPH
Trigger: GTGCGGGAGGGCCAAACGCAAGTGGACACCCCGCAG...GCACCGTGCACCTGGAGATCGGCCTGCTGCTCCGCAACTTCGACCGCTACGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594416.1
CDS-3UTR CAA 90 bp GCGGCCCACCACCCACGAAAGCCCGTGCCAACTGTTCTCGCCAACTGCCCAGGGGAGCCGGGGCCAGCCTaGAAGACCTTTGGTGGCGAA +
Preference number: 5 (lower is better)
Translates to: AAHHPRKPVPTVLANCPGEPGPA*KTFGGE
Trigger: TTCGCCACCAAAGGTCTTCAAGGCTGGCCCCGGCTC...CCCTGGGCAGTTGGCGAGAACAGTTGGCACGGGCTTTCGTGGGTGGTGGGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594416.1
CDS GCA 90 bp TTGGAGGCAGAGTCCCTCAGCACTCCACGCCGTAGCGGTCGAAGTTaGGGAGCAGCAGGCCGATCTCCAGGTGCACGGTGCCACCAGCAG +
Preference number: 5 (lower is better)
Translates to: LEAESLSTPRRSGRS*GAAGRSPGARCHQQ
Trigger: CTGCTGGTGGCACCGTGCACCTGGAGATCGGCCTGCTGCTCCGCAACTTCGACCGCTACGGCGTGGAGTGCTGAGGGACTCTGCCTCCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR CAA 90 bp CGGCCCACCACCCACGAAAGCCCGTGCCAACTGTTCTCGCCAACTGCCCAGGGGGCGACCGCGCTCGTCTaGGTTTCCGTGGTTGTTGCT +
Preference number: 5 (lower is better)
Translates to: RPTTHESPCQLFSPTAQGATALV*VSVVVA
Trigger: AGCAACAACCACGGAAACCAAGACGAGCGCGGTCGC...CCCCTGGGCAGTTGGCGAGAACAGTTGGCACGGGCTTTCGTGGGTGGTGGGCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594416.1
CDS-3UTR CAA 90 bp CTGTGCCATCCTCCCCCATCACTGGGTGTCCGGGGTGTGGATGGTGGTGACGTTCTGCGGGGTGTCCACTaGCGTTTGGCCCTCCCGCAC +
Preference number: 5 (lower is better)
Translates to: LCHPPPSLGVRGVDGGDVLRGVH*RLALPH
Trigger: GTGCGGGAGGGCCAAACGCAAGTGGACACCCCGCAG...AACGTCACCACCATCCACACCCCGGACACCCAGTGATGGGGGAGGATGGCACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR CAA 90 bp TTGACCACTGTGCCATCCTCCCCCATCACTGGGTGTCCGGGGTGTGGATGGTGGCTGCGGGGTGTCCACTaGCGTTTGGCCCTCCCGCAC +
Preference number: 5 (lower is better)
Translates to: LTTVPSSPITGCPGCGWWLRGVH*RLALPH
Trigger: GTGCGGGAGGGCCAAACGCAAGTGGACACCCCGCAG...CCACCATCCACACCCCGGACACCCAGTGATGGGGGAGGATGGCACAGTGGTCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS GCA 90 bp GGAGAGGAGAAAGCGGCAACCGGGGTTGTAGTTCATGGGCTTGACTaGTTCTTTTCTCCGCGGGCGCCGACCAGGCCTGGCTCGCGCCTC +
Preference number: 5 (lower is better)
Translates to: GEEKAATGVVVHGLD*FFSPRAPTRPGSRL
Trigger: GAGGCGCGAGCCAGGCCTGGTCGGCGCCCGCGGAGAAAAGAAGCAGTCAAGCCCATGAACTACAACCCCGGTTGCCGCTTTCTCCTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243578.8
ENST00000594416.1
ENST00000601597.1
CDS-3UTR CAA 90 bp CATCCTCCCCCATCACTGGGTGTCCGGGGTGTGGATGGTGGTGACGTTGGAGGCGAGCCGGGGCCAGCCTaGAAGACCTTTGGTGGCGAA +
Preference number: 5 (lower is better)
Translates to: HPPPSLGVRGVDGGDVGGEPGPA*KTFGGE
Trigger: TTCGCCACCAAAGGTCTTCAAGGCTGGCCCCGGCTC...GCCTCCAACGTCACCACCATCCACACCCCGGACACCCAGTGATGGGGGAGGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS TCA 90 bp GTTAGGAGAGGAGAAAGCGGCAACCGGGGTTGTAGTTCATGGGCTTaGCTGCTTCTTTTCTCCGCGGGCGCCGACCAGGCCTGGCTCGCG +
Preference number: 5 (lower is better)
Translates to: VRRGESGNRGCSSWA*LLLFSAGADQAWLA
Trigger: CGCGAGCCAGGCCTGGTCGGCGCCCGCGGAGAAAAGAAGCAGTCAAGCCCATGAACTACAACCCCGGTTGCCGCTTTCTCCTCTCCTAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243578.8
ENST00000594416.1
ENST00000601597.1
CDS-3UTR CAA 90 bp GACCCCGAGGTCCTAGAAAGGACAGAAGCGGTGCCATGCCTTAGCTGGGGTCAGGAGCCGGGGCCAGCCTaGAAGACCTTTGGTGGCGAA +
Preference number: 5 (lower is better)
Translates to: DPEVLERTEAVPCLSWGQEPGPA*KTFGGE
Trigger: TTCGCCACCAAAGGTCTTCAAGGCTGGCCCCGGCTC...CTGACCCCAGCTAAGGCATGGCACCGCTTCTGTCCTTTCTAGGACCTCGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR CAA 90 bp TGTGCCATCCTCCCCCATCACTGGGTGTCCGGGGTGTGGATGGTGGTGACGTTGTGGATGGTGGTGACGTaGGAGGCAGAGTCCCTCAGC +
Preference number: 5 (lower is better)
Translates to: CAILPHHWVSGVWMVVTLWMVVT*EAESLS
Trigger: GCTGAGGGACTCTGCCTCCAACGTCACCACCATCCA...CAACGTCACCACCATCCACACCCCGGACACCCAGTGATGGGGGAGGATGGCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS-3UTR CAA 90 bp GCCACCAGCAGCTGTGTGCAGGCGATAGCGGTCGGCCCCACTGTAGATGGTGTCTGGTTTCCGTGGTTGTaGCTGGGGCAACAGCAGGCT +
Preference number: 5 (lower is better)
Translates to: ATSSCVQAIAVGPTVDGVWFPWL*LGQQQA
Trigger: AGCCTGCTGTTGCCCCAGCAACAACCACGGAAACCA...GACACCATCTACAGTGGGGCCGACCGCTATCGCCTGCACACAGCTGCTGGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594416.1
CDS-3UTR CAA 90 bp CATCCTCCCCCATCACTGGGTGTCCGGGGTGTGGATGGTGGTGACGTTGGAGGCCTAGAGTCTGTGCTCTaGACCACTGTGCCATCCTCC +
Preference number: 5 (lower is better)
Translates to: HPPPSLGVRGVDGGDVGGLESVL*TTVPSS
Trigger: GGAGGATGGCACAGTGGTCAAGAGCACAGACTCTAG...GCCTCCAACGTCACCACCATCCACACCCCGGACACCCAGTGATGGGGGAGGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS TCA 90 bp CCCACTTGCAGAAGAGGCTACTTTCCGAGAAACCGCTGGCCCCTATaGTCTGCCCGATCACGTGCACCTCAGCCATGGCCCTTAGCGCAC +
Preference number: 5 (lower is better)
Translates to: PTCRRGYFPRNRWPL*SARSRAPQPWPLAH
Trigger: GTGCGCTAAGGGCCATGGCTGAGGTGCACGTGATCGGGCAGATCATAGGGGCCAGCGGTTTCTCGGAAAGTAGCCTCTTCTGCAAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243578.8
ENST00000594416.1
ENST00000601597.1
CDS TCA 90 bp CCCACTTGCAGAAGAGGCTACTTTCCGAGAAACCGCTGGCCCCTATaGTCTGCCCGATCACGTGCACCTCAGCCATGGCCCTTTTCGGGT +
Preference number: 5 (lower is better)
Translates to: PTCRRGYFPRNRWPL*SARSRAPQPWPFSG
Trigger: ACCCGAAAAGGGCCATGGCTGAGGTGCACGTGATCGGGCAGATCATAGGGGCCAGCGGTTTCTCGGAAAGTAGCCTCTTCTGCAAGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675972.1
CDS-3UTR CAA 90 bp AGGGACCCCGAGGTCCTAGAAAGGACAGAAGCGGTGCCATGCCTTAGCTGGGGTCTAGAGTCTGTGCTCTaGACCACTGTGCCATCCTCC +
Preference number: 5 (lower is better)
Translates to: RDPEVLERTEAVPCLSWGLESVL*TTVPSS
Trigger: GGAGGATGGCACAGTGGTCAAGAGCACAGACTCTAG...ACCCCAGCTAAGGCATGGCACCGCTTCTGTCCTTTCTAGGACCTCGGGGTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS GCA 90 bp TTGCAGAAGAGGCTACTTTCCGAGAAACCGCTGGCCCCTATGATCTaGCCGATCACGTGCACCTCAGCCATGGCCCTTTTCGGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: LQKRLLSEKPLAPMI*PITCTSAMALFGFR
Trigger: CCTGAACCCGAAAAGGGCCATGGCTGAGGTGCACGTGATCGGGCAGATCATAGGGGCCAGCGGTTTCTCGGAAAGTAGCCTCTTCTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675972.1
CDS GCA 90 bp TTGCAGAAGAGGCTACTTTCCGAGAAACCGCTGGCCCCTATGATCTaGCCGATCACGTGCACCTCAGCCATGGCCCTTAGCGCACTTAAC +
Preference number: 5 (lower is better)
Translates to: LQKRLLSEKPLAPMI*PITCTSAMALSALN
Trigger: GTTAAGTGCGCTAAGGGCCATGGCTGAGGTGCACGTGATCGGGCAGATCATAGGGGCCAGCGGTTTCTCGGAAAGTAGCCTCTTCTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243578.8
ENST00000594416.1
ENST00000601597.1
CDS-3UTR CAA 90 bp CCTGCGACCCCATACATTTACTGTCCCCAATTTACAGATAGGGAAACTGGGCCCGCGACCGCGCTCGTCTaGGTTTCCGTGGTTGTTGCT +
Preference number: 5 (lower is better)
Translates to: PATPYIYCPQFTDRETGPATALV*VSVVVA
Trigger: AGCAACAACCACGGAAACCAAGACGAGCGCGGTCGC...GGGCCCAGTTTCCCTATCTGTAAATTGGGGACAGTAAATGTATGGGGTCGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000243578.8
CDS CCA 90 bp CTGCAGAGCCCAAGCCTTTCATCCAACTGCCTCAGTATTCTTGGCTaGATCAACATCCCCAGCAACTCCCTGTGTGAATGCCCCACTTGC +
Preference number: 5 (lower is better)
Translates to: LQSPSLSSNCLSILG*INIPSNSLCECPTC
Trigger: GCAAGTGGGGCATTCACACAGGGAGTTGCTGGGGATGTTGATCCAGCCAAGAATACTGAGGCAGTTGGATGAAAGGCTTGGGCTCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601597.1
CDS-3UTR CAA 90 bp CTCAACACCCTGCGACCCCATACATTTACTGTCCCCAATTTACAGATAGGGAAATGGATGGTGGTGACGTaGGAGGCAGAGTCCCTCAGC +
Preference number: 5 (lower is better)
Translates to: LNTLRPHTFTVPNLQIGKWMVVT*EAESLS
Trigger: GCTGAGGGACTCTGCCTCCAACGTCACCACCATCCA...TTTCCCTATCTGTAAATTGGGGACAGTAAATGTATGGGGTCGCAGGGTGTTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS GCA 90 bp AGACCAAGGTCCCATCATGGGACTGGATTCAGACTCAGCTCTAACTaGAGAGCCCAAGCCTTTCATCCAACTGCCTCAGTATTCTTGGCT +
Preference number: 5 (lower is better)
Translates to: RPRSHHGTGFRLSSN*RAQAFHPTASVFLA
Trigger: AGCCAAGAATACTGAGGCAGTTGGATGAAAGGCTTGGGCTCTGCAGTTAGAGCTGAGTCTGAATCCAGTCCCATGATGGGACCTTGGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601597.1
CDS GCA 72 bp AGGCCTGGCTCGCGCCTCTCCCAGGACCCGCCTGGCTaGGAGATATGTAAGCCGCGATACTTCCGCGACCGC +
Preference number: 6 (lower is better)
Translates to: RPGSRLSQDPPG*EICKPRYFRDR
Trigger: GCGGTCGCGGAAGTATCGCGGCTTACATATCTCGCAGCCAGGCGGGTCCTGGGAGAGGCGCGAGCCAGGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000594416.1
CDS TCA 72 bp CGGGGTGTCCACTTGCGTTTGGCCCTCCCGCACGCCTaGCAGGAGCTTCCATGCCGCCCCTGTGTGAATGCC +
Preference number: 6 (lower is better)
Translates to: RGVHLRLALPHA*QELPCRPCVNA
Trigger: GGCATTCACACAGGGGCGGCATGGAAGCTCCTGTCAGGCGTGCGGGAGGGCCAAACGCAAGTGGACACCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS CCA 72 bp GCCATGTCCCCTATCTGCGGGGTGTCCACTTGCGTTTaGCCCTCCCGCACGCCTGACAGGAGCTTCCATGCC +
Preference number: 6 (lower is better)
Translates to: AMSPICGVSTCV*PSRTPDRSFHA
Trigger: GGCATGGAAGCTCCTGTCAGGCGTGCGGGAGGGCCAAACGCAAGTGGACACCCCGCAGATAGGGGACATGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243578.8
ENST00000594416.1
ENST00000675972.1
CDS TCA 72 bp GGAGAAAGCGGCAACCGGGGTTGTAGTTCATGGGCTTaGCTGCTTCTTTTCTCCGCGGGCGCCGACCAGGCC +
Preference number: 6 (lower is better)
Translates to: GESGNRGCSSWA*LLLFSAGADQA
Trigger: GGCCTGGTCGGCGCCCGCGGAGAAAAGAAGCAGTCAAGCCCATGAACTACAACCCCGGTTGCCGCTTTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243578.8
ENST00000594416.1
ENST00000601597.1
CDS GCA 72 bp AAAGCGGCAACCGGGGTTGTAGTTCATGGGCTTGACTaGTTCTTTTCTCCGCGGGCGCCGACCAGGCCTGGC +
Preference number: 6 (lower is better)
Translates to: KAATGVVVHGLD*FFSPRAPTRPG
Trigger: GCCAGGCCTGGTCGGCGCCCGCGGAGAAAAGAAGCAGTCAAGCCCATGAACTACAACCCCGGTTGCCGCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243578.8
ENST00000594416.1
ENST00000601597.1
CDS TCA 72 bp CGGGGTGTCCACTTGCGTTTGGCCCTCCCGCACGCCTaGCAGGAGCTTCCATGCCGCCCGTTTTTAATCCTA +
Preference number: 6 (lower is better)
Translates to: RGVHLRLALPHA*QELPCRPFLIL
Trigger: TAGGATTAAAAACGGGCGGCATGGAAGCTCCTGTCAGGCGTGCGGGAGGGCCAAACGCAAGTGGACACCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594416.1
CDS GCA 72 bp GGAGCTTCCATGCCGCCCCTGTGTGAATGCCCCACTTaGAGAAGAGGCTACTTTCCGAGAAACCGCTGGCCC +
Preference number: 6 (lower is better)
Translates to: GASMPPLCECPT*RRGYFPRNRWP
Trigger: GGGCCAGCGGTTTCTCGGAAAGTAGCCTCTTCTGCAAGTGGGGCATTCACACAGGGGCGGCATGGAAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243578.8
ENST00000675972.1
CDS GCA 72 bp GAGAAACCGCTGGCCCCTATGATCTGCCCGATCACGTaGACCTCAGCCATGGCCCTTTTCGGGTTCAGGTCG +
Preference number: 6 (lower is better)
Translates to: EKPLAPMICPIT*TSAMALFGFRS
Trigger: CGACCTGAACCCGAAAAGGGCCATGGCTGAGGTGCACGTGATCGGGCAGATCATAGGGGCCAGCGGTTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675972.1
CDS TCA 72 bp AGAAGAGGCTACTTTCCGAGAAACCGCTGGCCCCTATaGTCTGCCCGATCACGTGCACCTCAGCCATGGCCC +
Preference number: 6 (lower is better)
Translates to: RRGYFPRNRWPL*SARSRAPQPWP
Trigger: GGGCCATGGCTGAGGTGCACGTGATCGGGCAGATCATAGGGGCCAGCGGTTTCTCGGAAAGTAGCCTCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243578.8
ENST00000594416.1
ENST00000601597.1
ENST00000675972.1
CDS GCA 72 bp GAGAAACCGCTGGCCCCTATGATCTGCCCGATCACGTaGACCTCAGCCATGGCCCTTAGCGCACTTAACGGT +
Preference number: 6 (lower is better)
Translates to: EKPLAPMICPIT*TSAMALSALNG
Trigger: ACCGTTAAGTGCGCTAAGGGCCATGGCTGAGGTGCACGTGATCGGGCAGATCATAGGGGCCAGCGGTTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243578.8
ENST00000594416.1
ENST00000601597.1
CDS GCA 72 bp AGGCTACTTTCCGAGAAACCGCTGGCCCCTATGATCTaGCCGATCACGTGCACCTCAGCCATGGCCCTTAGC +
Preference number: 6 (lower is better)
Translates to: RLLSEKPLAPMI*PITCTSAMALS
Trigger: GCTAAGGGCCATGGCTGAGGTGCACGTGATCGGGCAGATCATAGGGGCCAGCGGTTTCTCGGAAAGTAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243578.8
ENST00000594416.1
ENST00000601597.1
CDS CAA 72 bp TATGTAAGCCGCGATACTTCCGCGACCGCGCTCGTCTaGGTTTCCGTGGTTGTTGCTGGGGCAACAGCAGGC +
Preference number: 6 (lower is better)
Translates to: YVSRDTSATALV*VSVVVAGATAG
Trigger: GCCTGCTGTTGCCCCAGCAACAACCACGGAAACCAAGACGAGCGCGGTCGCGGAAGTATCGCGGCTTACATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594416.1
CDS GCA 72 bp AGGCTACTTTCCGAGAAACCGCTGGCCCCTATGATCTaGCCGATCACGTGCACCTCAGCCATGGCCCTTTTC +
Preference number: 6 (lower is better)
Translates to: RLLSEKPLAPMI*PITCTSAMALF
Trigger: GAAAAGGGCCATGGCTGAGGTGCACGTGATCGGGCAGATCATAGGGGCCAGCGGTTTCTCGGAAAGTAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675972.1
CDS CCA 72 bp AGCCTTGAAGACCTTTGGTGGCGAAGTGCAGGTCGATaGGGTGGGACCAGTAAGCCATGTCCCCTATCTGCG +
Preference number: 6 (lower is better)
Translates to: SLEDLWWRSAGR*GGTSKPCPLSA
Trigger: CGCAGATAGGGGACATGGCTTACTGGTCCCACCCCATCGACCTGCACTTCGCCACCAAAGGTCTTCAAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243578.8
ENST00000594416.1
ENST00000675972.1
CDS GCA 72 bp AACATCCCCAGCAACTCCCTGTGTGAATGCCCCACTTaGAGAAGAGGCTACTTTCCGAGAAACCGCTGGCCC +
Preference number: 6 (lower is better)
Translates to: NIPSNSLCECPT*RRGYFPRNRWP
Trigger: GGGCCAGCGGTTTCTCGGAAAGTAGCCTCTTCTGCAAGTGGGGCATTCACACAGGGAGTTGCTGGGGATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601597.1
CDS GCA 72 bp CATAGCGAGACCCTGTCTCTGTGTGAATGCCCCACTTaGAGAAGAGGCTACTTTCCGAGAAACCGCTGGCCC +
Preference number: 6 (lower is better)
Translates to: HSETLSLCECPT*RRGYFPRNRWP
Trigger: GGGCCAGCGGTTTCTCGGAAAGTAGCCTCTTCTGCAAGTGGGGCATTCACACAGAGACAGGGTCTCGCTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594416.1
CDS CAA 72 bp AGAGCCCAAGCCTTTCATCCAACTGCCTCAGTATTCTaGGCTGGATCAACATCCCCAGCAACTCCCTGTGTG +
Preference number: 6 (lower is better)
Translates to: RAQAFHPTASVF*AGSTSPATPCV
Trigger: CACACAGGGAGTTGCTGGGGATGTTGATCCAGCCAAGAATACTGAGGCAGTTGGATGAAAGGCTTGGGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601597.1
CDS CAA 90 bp TCTAACTGCAGAGCCCAAGCCTTTCATCCAACTGCCTCAGTATTCTaGGCTGGATCAACATCCCCAGCAACTCCCTGTGTGAATGCCCCA +
Preference number: 6 (lower is better)
Translates to: SNCRAQAFHPTASVF*AGSTSPATPCVNAP
Trigger: TGGGGCATTCACACAGGGAGTTGCTGGGGATGTTGATCCAGCCAAGAATACTGAGGCAGTTGGATGAAAGGCTTGGGCTCTGCAGTTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601597.1
CDS GCA 72 bp TCCCATCATGGGACTGGATTCAGACTCAGCTCTAACTaGAGAGCCCAAGCCTTTCATCCAACTGCCTCAGTA +
Preference number: 6 (lower is better)
Translates to: SHHGTGFRLSSN*RAQAFHPTASV
Trigger: TACTGAGGCAGTTGGATGAAAGGCTTGGGCTCTGCAGTTAGAGCTGAGTCTGAATCCAGTCCCATGATGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601597.1