RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATXN7 (Homo sapiens)

Ensembl gene IDs: ENSG00000163635

Ensembl transcript IDs: ENST00000295900.10, ENST00000466529.1, ENST00000472569.1, ENST00000474112.5, ENST00000474513.6, ENST00000475897.1, ENST00000477516.1, ENST00000484332.1, ENST00000484668.1, ENST00000487717.5, ENST00000488239.1, ENST00000522345.2, ENST00000642539.1, ENST00000643453.1, ENST00000643464.1, ENST00000646942.1, ENST00000647117.1, ENST00000650280.1, ENST00000674254.1, ENST00000674280.1

Found 1190 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTaGGAAAACAGACTCAAAGGCATCGTGGAGTCCAGAGTGCTGAGT +
Preference number: 1 (lower is better)
Translates to: KQQPGRFLPLRPTGG*ENRLKGIVESRVLS
Trigger: ACTCAGCACTCTGGACTCCACGATGCCTTTGAGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
3UTR CCA 90 bp CAGAGGGTTGCTCGGGATGCAGCCCTGTGTTCTCTGGAAGGTTTCTaGTCTCCAGTTAAGGTGCCTAACTGCTGGAGAGTGACCTACAGA +
Preference number: 1 (lower is better)
Translates to: QRVARDAALCSLEGF*SPVKVPNCWRVTYR
Trigger: TCTGTAGGTCACTCTCCAGCAGTTAGGCACCTTAACTGGAGACCAGAAACCTTCCAGAGAACACAGGGCTGCATCCCGAGCAACCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
3UTR CCA 90 bp ATTCCCTTCTTCAGAGGGTTGCTCGGGATGCAGCCCTGTGTTCTCTaGAAGGTTTCTGGTCTCCAGTTAAGGTGCCTAACTGCTGGAGAG +
Preference number: 1 (lower is better)
Translates to: IPFFRGLLGMQPCVL*KVSGLQLRCLTAGE
Trigger: CTCTCCAGCAGTTAGGCACCTTAACTGGAGACCAGAAACCTTCCAGAGAACACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAGGGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
3UTR GCA 90 bp TTTTACCCTGTGTTCGGCAACTTCGTGTGTTCTTCTAAGCAACAGTaGCTGTTACTCGTGTCAGGAGCCTGTAGTGGTGGAAGCACCCAT +
Preference number: 1 (lower is better)
Translates to: FYPVFGNFVCSSKQQ*LLLVSGACSGGSTH
Trigger: ATGGGTGCTTCCACCACTACAGGCTCCTGACACGAGTAACAGGCACTGTTGCTTAGAAGAACACACGAAGTTGCCGAACACAGGGTAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
3UTR CCA 90 bp TTGGGAAAACAGACTCAAAGGCATCGTGGAGTCCAGAGTGCTGAGTaGAGGTGTAACTTGTCCTCAAAAGTGTCCGCATTATTCCTCCCC +
Preference number: 1 (lower is better)
Translates to: LGKQTQRHRGVQSAE*RCNLSSKVSALFLP
Trigger: GGGGAGGAATAATGCGGACACTTTTGAGGACAAGTTACACCTCCACTCAGCACTCTGGACTCCACGATGCCTTTGAGTCTGTTTTCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
3UTR GCA 90 bp GTTACATGTAGTCTATCGGGAAACCAGGCAACCAGGAAGAAGCAATaGCCACTTCATCTGTATGAATCCACTCCCGAGACACTAAAAGGG +
Preference number: 1 (lower is better)
Translates to: VTCSLSGNQATRKKQ*PLHLYESTPETLKG
Trigger: CCCTTTTAGTGTCTCGGGAGTGGATTCATACAGATGAAGTGGGCATTGCTTCTTCCTGGTTGCCTGGTTTCCCGATAGACTACATGTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
3UTR GCA 90 bp GGAGGGAGAAAGGTCTACAGTAACGCTCTTGCCAAAACATTCTTTTaGCCAGCCAATCTACTTGAAGAGTGGCTCTGTGATATACTGCAA +
Preference number: 1 (lower is better)
Translates to: GGRKVYSNALAKTFF*PANLLEEWLCDILQ
Trigger: TTGCAGTATATCACAGAGCCACTCTTCAAGTAGATTGGCTGGGCAAAAGAATGTTTTGGCAAGAGCGTTACTGTAGACCTTTCTCCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
3UTR TCA 90 bp TGTTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTaGCAAAAGATCTTAAGGGAGAAGAAATGGGCATTCCCATGGGGC +
Preference number: 1 (lower is better)
Translates to: CLQTNQPTQPNTFLS*QKILREKKWAFPWG
Trigger: GCCCCATGGGAATGCCCATTTCTTCTCCCTTAAGATCTTTTGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474112.5
3UTR GCA 90 bp AGTGGCATGAAGGGGAGTGCATACAAAAACACACAATGCCAGAAGTaGTTGAAGCAGAAATCTACACTTAGTCCCAGGACAGTATCCAAA +
Preference number: 1 (lower is better)
Translates to: SGMKGSAYKNTQCQK*LKQKSTLSPRTVSK
Trigger: TTTGGATACTGTCCTGGGACTAAGTGTAGATTTCTGCTTCAAGCACTTCTGGCATTGTGTGTTTTTGTATGCACTCCCCTTCATGCCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
3UTR GCA 90 bp TATAATCCCAAGAAAGGAGGGTGTGTGTCAGGGCAATCCTATACATaGATCACAAAAGACCTTCAGGTCAGGACTTACATTCTCTCCAAC +
Preference number: 1 (lower is better)
Translates to: YNPKKGGCVSGQSYT*ITKDLQVRTYILSN
Trigger: GTTGGAGAGAATGTAAGTCCTGACCTGAAGGTCTTTTGTGATGCATGTATAGGATTGCCCTGACACACACCCTCCTTTCTTGGGATTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
3UTR CCA 90 bp GACACATCGTGTAAGTTGCTGGCTGACAAAAAGATCTGTAACCCTTaGTGCCACCAGGCAATCCATCACCAATTGAATTACTATGAACCA +
Preference number: 1 (lower is better)
Translates to: DTSCKLLADKKICNP*CHQAIHHQLNYYEP
Trigger: TGGTTCATAGTAATTCAATTGGTGATGGATTGCCTGGTGGCACCAAGGGTTACAGATCTTTTTGTCAGCCAGCAACTTACACGATGTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
3UTR TCA 90 bp CTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTCCTTTATaGGTACTCACTGCTAGAGACATAGCTTCAGGGAAATCCTCGTTA +
Preference number: 1 (lower is better)
Translates to: LIKAIRWLNLIQCPL*VLTARDIASGKSSL
Trigger: TAACGAGGATTTCCCTGAAGCTATGTCTCTAGCAGTGAGTACTCATAAAGGACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
3UTR GCA 90 bp ACATCGTGTAAGTTGCTGGCTGACAAAAAGATCTGTAACCCTTGGTaGCACCAGGCAATCCATCACCAATTGAATTACTATGAACCAAGA +
Preference number: 1 (lower is better)
Translates to: TSCKLLADKKICNPW*HQAIHHQLNYYEPR
Trigger: TCTTGGTTCATAGTAATTCAATTGGTGATGGATTGCCTGGTGGCACCAAGGGTTACAGATCTTTTTGTCAGCCAGCAACTTACACGATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
3UTR CAA 90 bp AAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTaGGGAAAACAGACTCAAAGGCATCGTGGAGTCCAGAGTGCTGAG +
Preference number: 2 (lower is better)
Translates to: KTTARQVSTLEAHRR*GKQTQRHRGVQSAE
Trigger: CTCAGCACTCTGGACTCCACGATGCCTTTGAGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
3UTR-3UTR TCA 90 bp CAGGCCCTGGCCAGGGCAACGATCAGCGCCTTGGAAATTTTACCCTGTGTTCGGCTAACTGCTGGAGAGTaGCCTACAGATGACAGTGTT +
Preference number: 2 (lower is better)
Translates to: QALARATISALEILPCVRLTAGE*PTDDSV
Trigger: AACACTGTCATCTGTAGGTCACTCTCCAGCAGTTAG...CCGAACACAGGGTAAAATTTCCAAGGCGCTGATCGTTGCCCTGGCCAGGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
3UTR CAA 90 bp TCAGGGAAATCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTaGAGGCCCACAGGAGGTTGGGAAAACAGACTCAAAGGCATCGTG +
Preference number: 2 (lower is better)
Translates to: SGKSSLKQQPGRFLP*RPTGGWENRLKGIV
Trigger: CACGATGCCTTTGAGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGATTTCCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
3UTR-3UTR TCA 90 bp GTACTCACTGCTAGAGACATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCGCAGGTTTCTACCCTTaGGGCCCACAGGAGGTTGGG +
Preference number: 2 (lower is better)
Translates to: VLTARDIASGKSSLKQQPAGFYP*GPQEVG
Trigger: CCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGC...GGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATGTCTCTAGCAGTGAGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
3UTR-3UTR TCA 90 bp CAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTGCAGGTTTCTACCCTTaGGGCCCACAGGAGGTTGGG +
Preference number: 2 (lower is better)
Translates to: QTTLTLIKAIRWLNLIQCAGFYP*GPQEVG
Trigger: CCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGC...ACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
3UTR-3UTR CCA 90 bp AATCTAAAGCCTAATTCCCTTCTTCAGAGGGTTGCTCGGGATGCAGCCCTGTGTGTCCAGAGTGCTGAGTaGAGGTGTAACTTGTCCTCA +
Preference number: 2 (lower is better)
Translates to: NLKPNSLLQRVARDAALCVQSAE*RCNLSS
Trigger: TGAGGACAAGTTACACCTCCACTCAGCACTCTGGAC...ACACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAGGGAATTAGGCTTTAGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
3UTR-3UTR GCA 90 bp CTATCCCTTGACATTTGTTCATGTTCTATACAGCAGCCAACACAAAGTCCAGCTCCTTCTTCAGAGGGTTaGTCGGGATGCAGCCCTGTG +
Preference number: 2 (lower is better)
Translates to: LSLDICSCSIQQPTQSPAPSSEG*SGCSPV
Trigger: CACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAGG...AGCTGGACTTTGTGTTGGCTGCTGTATAGAACATGAACAAATGTCAAGGGATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
3UTR-3UTR TCA 90 bp ACAAAAACTTCTCACAGATTGGTAGCAAGCAGTTCAGACCACTTTAACACTGATGCAGGTTTCTACCCTTaGGGCCCACAGGAGGTTGGG +
Preference number: 2 (lower is better)
Translates to: TKTSHRLVASSSDHFNTDAGFYP*GPQEVG
Trigger: CCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGC...ATCAGTGTTAAAGTGGTCTGAACTGCTTGCTACCAATCTGTGAGAAGTTTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
3UTR-3UTR CCA 90 bp GTACTCACTGCTAGAGACATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCGTCCAGAGTGCTGAGTaGAGGTGTAACTTGTCCTCA +
Preference number: 2 (lower is better)
Translates to: VLTARDIASGKSSLKQQPVQSAE*RCNLSS
Trigger: TGAGGACAAGTTACACCTCCACTCAGCACTCTGGAC...GGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATGTCTCTAGCAGTGAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
3UTR-3UTR GCA 90 bp AAAAGGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCGAGGGTTGCTCGGGATaGAGCCCTGTGTTCTCTGGA +
Preference number: 2 (lower is better)
Translates to: KRLGYFVMVSWANIYISFEGCSG*SPVFSG
Trigger: TCCAGAGAACACAGGGCTGCATCCCGAGCAACCCTC...GAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
3UTR CAA 90 bp GGCATGAAGGGGAGTGCATACAAAAACACACAATGCCAGAAGTGCTaGAAGCAGAAATCTACACTTAGTCCCAGGACAGTATCCAAAGAG +
Preference number: 2 (lower is better)
Translates to: GMKGSAYKNTQCQKC*KQKSTLSPRTVSKE
Trigger: CTCTTTGGATACTGTCCTGGGACTAAGTGTAGATTTCTGCTTCAAGCACTTCTGGCATTGTGTGTTTTTGTATGCACTCCCCTTCATGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
3UTR-3UTR CCA 90 bp GTAGCAAGCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAAGTCCAGAGTGCTGAGTaGAGGTGTAACTTGTCCTCA +
Preference number: 2 (lower is better)
Translates to: VASSSDHFNTDKSNSVAEVQSAE*RCNLSS
Trigger: TGAGGACAAGTTACACCTCCACTCAGCACTCTGGAC...TTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGCTTGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
3UTR-3UTR CCA 90 bp AGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTCCAGAGTGCTGAGTaGAGGTGTAACTTGTCCTCA +
Preference number: 2 (lower is better)
Translates to: SSDHFNTDKSNSVAELDPVQSAE*RCNLSS
Trigger: TGAGGACAAGTTACACCTCCACTCAGCACTCTGGAC...TGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
3UTR-3UTR CCA 90 bp ACAAAAACTTCTCACAGATTGGTAGCAAGCAGTTCAGACCACTTTAACACTGATAGGCCCACAGGAGGTTaGGAAAACAGACTCAAAGGC +
Preference number: 2 (lower is better)
Translates to: TKTSHRLVASSSDHFNTDRPTGG*ENRLKG
Trigger: GCCTTTGAGTCTGTTTTCCCAACCTCCTGTGGGCCT...ATCAGTGTTAAAGTGGTCTGAACTGCTTGCTACCAATCTGTGAGAAGTTTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
3UTR-3UTR CCA 90 bp CTATCCCTTGACATTTGTTCATGTTCTATACAGCAGCCAACACAAAGTCCAGCTAAGATCTGTAACCCTTaGTGCCACCAGGCAATCCAT +
Preference number: 2 (lower is better)
Translates to: LSLDICSCSIQQPTQSPAKICNP*CHQAIH
Trigger: ATGGATTGCCTGGTGGCACCAAGGGTTACAGATCTT...AGCTGGACTTTGTGTTGGCTGCTGTATAGAACATGAACAAATGTCAAGGGATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
3UTR-3UTR GCA 90 bp AAAAGGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCGTTAAGGTGCCTAACTaGTGGAGAGTGACCTACAGA +
Preference number: 2 (lower is better)
Translates to: KRLGYFVMVSWANIYISFVKVPN*WRVTYR
Trigger: TCTGTAGGTCACTCTCCAGCAGTTAGGCACCTTAAC...GAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
3UTR-3UTR GCA 90 bp TGTTTGTGGCAGACAGAATCCAAAATGGCTAATTTCCTAATCCCGATGCTCTGTTGGCATGAAGGGGAGTaGATACAAAAACACACAATG +
Preference number: 2 (lower is better)
Translates to: CLWQTESKMANFLIPMLCWHEGE*IQKHTM
Trigger: CATTGTGTGTTTTTGTATGCACTCCCCTTCATGCCA...ACAGAGCATCGGGATTAGGAAATTAGCCATTTTGGATTCTGTCTGCCACAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
3UTR-3UTR CCA 90 bp TCAAAAGGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCTCTGGAAGGTTTCTaGTCTCCAGTTAAGGTGCCT +
Preference number: 2 (lower is better)
Translates to: SKGWAILSWCLGLTSIFHSLEGF*SPVKVP
Trigger: AGGCACCTTAACTGGAGACCAGAAACCTTCCAGAGA...ATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCTTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
3UTR CAA 90 bp CTGACAGCTTCTTTTCCCAAATTACTCTCAAAAGGCTGGGCTATTTaGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCCTGGAAC +
Preference number: 2 (lower is better)
Translates to: LTASFPKLLSKGWAI*SWCLGLTSIFHSWN
Trigger: GTTCCAGGAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCTTTTGAGAGTAATTTGGGAAAAGAAGCTGTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
3UTR-3UTR CCA 90 bp CATTGCTATCAAAATCTAAAGCCTAATTCCCTTCTTCAGAGGGTTGCTCGGGATATAAAAGCAATTCGGTaGCTGAACTTGATCCAGTGT +
Preference number: 2 (lower is better)
Translates to: HCYQNLKPNSLLQRVARDIKAIR*LNLIQC
Trigger: ACACTGGATCAAGTTCAGCCACCGAATTGCTTTTAT...ATCCCGAGCAACCCTCTGAAGAAGGGAATTAGGCTTTAGATTTTGATAGCAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
3UTR-3UTR CCA 90 bp ACTTGTTATTGTGGATCCTATTCACATCTTTCGGAACAACATGATCGATCTGTATCTCTGGAAGGTTTCTaGTCTCCAGTTAAGGTGCCT +
Preference number: 2 (lower is better)
Translates to: TCYCGSYSHLSEQHDRSVSLEGF*SPVKVP
Trigger: AGGCACCTTAACTGGAGACCAGAAACCTTCCAGAGA...TACAGATCGATCATGTTGTTCCGAAAGATGTGAATAGGATCCACAATAACAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
3UTR-3UTR CCA 90 bp AATAAACATCTGAAGTGGCATGAAGGGGAGTGCATACAAAAACACACAATGCCATGGGCTATTTTGTCATaGTGTCTTGGGCTAACATCT +
Preference number: 2 (lower is better)
Translates to: NKHLKWHEGECIQKHTMPWAILS*CLGLTS
Trigger: AGATGTTAGCCCAAGACACCATGACAAAATAGCCCA...TGGCATTGTGTGTTTTTGTATGCACTCCCCTTCATGCCACTTCAGATGTTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
3UTR-3UTR TCA 90 bp CTATCCCTTGACATTTGTTCATGTTCTATACAGCAGCCAACACAAAGTCCAGCTTCTTTCGGAACAACATaGTCGATCTGTAAATTCCAT +
Preference number: 2 (lower is better)
Translates to: LSLDICSCSIQQPTQSPASFGTT*SICKFH
Trigger: ATGGAATTTACAGATCGATCATGTTGTTCCGAAAGA...AGCTGGACTTTGTGTTGGCTGCTGTATAGAACATGAACAAATGTCAAGGGATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
3UTR-3UTR GCA 90 bp ACTTGTTATTGTGGATCCTATTCACATCTTTCGGAACAACATGATCGATCTGTATCTTCTAAGCAACAGTaGCTGTTACTCGTGTCAGGA +
Preference number: 2 (lower is better)
Translates to: TCYCGSYSHLSEQHDRSVSSKQQ*LLLVSG
Trigger: TCCTGACACGAGTAACAGGCACTGTTGCTTAGAAGA...TACAGATCGATCATGTTGTTCCGAAAGATGTGAATAGGATCCACAATAACAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
3UTR-3UTR CCA 90 bp TCAAAAGGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATATAAAAGCAATTCGGTaGCTGAACTTGATCCAGTGT +
Preference number: 2 (lower is better)
Translates to: SKGWAILSWCLGLTSIFHIKAIR*LNLIQC
Trigger: ACACTGGATCAAGTTCAGCCACCGAATTGCTTTTAT...ATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCTTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
3UTR-3UTR TCA 90 bp ACTTGTTATTGTGGATCCTATTCACATCTTTCGGAACAACATGATCGATCTGTAAGTAAGCCTCCAAAATaGTTTATACTTGCTGTCTGG +
Preference number: 2 (lower is better)
Translates to: TCYCGSYSHLSEQHDRSVSKPPK*FILAVW
Trigger: CCAGACAGCAAGTATAAATCATTTTGGAGGCTTACT...TACAGATCGATCATGTTGTTCCGAAAGATGTGAATAGGATCCACAATAACAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
3UTR-3UTR CCA 90 bp ACAAAAACAAAAACTTCTCACAGATTGGTAGCAAGCAGTTCAGACCACTTTAACATAAAAGCAATTCGGTaGCTGAACTTGATCCAGTGT +
Preference number: 2 (lower is better)
Translates to: TKTKTSHRLVASSSDHFNIKAIR*LNLIQC
Trigger: ACACTGGATCAAGTTCAGCCACCGAATTGCTTTTAT...GTTAAAGTGGTCTGAACTGCTTGCTACCAATCTGTGAGAAGTTTTTGTTTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
3UTR-3UTR CCA 90 bp GGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCCTGGAACATAATCTACTTGAAGAGTaGCTCTGTGATATACTGCAA +
Preference number: 2 (lower is better)
Translates to: GYFVMVSWANIYISFLEHNLLEE*LCDILQ
Trigger: TTGCAGTATATCACAGAGCCACTCTTCAAGTAGATT...ATGTTCCAGGAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
3UTR CAA 90 bp AATTCCATTGCTAAAGGCAACTTTATTTATAACCATCAAGTCCTCTaGGCTCTGAAAATAAATTCTACCCATACCCCATTGCACTTGTCA +
Preference number: 2 (lower is better)
Translates to: NSIAKGNFIYNHQVL*ALKINSTHTPLHLS
Trigger: TGACAAGTGCAATGGGGTATGGGTAGAATTTATTTTCAGAGCCAAGAGGACTTGATGGTTATAAATAAAGTTGCCTTTAGCAATGGAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
3UTR-3UTR CCA 90 bp GCCTCCAAAATGATTTATACTTGCTGTCTGGGCATCAAAAATTTCAAACCAGTTAATCTACTTGAAGAGTaGCTCTGTGATATACTGCAA +
Preference number: 2 (lower is better)
Translates to: ASKMIYTCCLGIKNFKPVNLLEE*LCDILQ
Trigger: TTGCAGTATATCACAGAGCCACTCTTCAAGTAGATT...AACTGGTTTGAAATTTTTGATGCCCAGACAGCAAGTATAAATCATTTTGGAGGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
3UTR CCA 72 bp CCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTaGGAAAACAGACTCAAAGGCATCGTGGAGTCCAGA +
Preference number: 3 (lower is better)
Translates to: PGRFLPLRPTGG*ENRLKGIVESR
Trigger: TCTGGACTCCACGATGCCTTTGAGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
3UTR CCA 72 bp GCTCGGGATGCAGCCCTGTGTTCTCTGGAAGGTTTCTaGTCTCCAGTTAAGGTGCCTAACTGCTGGAGAGTG +
Preference number: 3 (lower is better)
Translates to: ARDAALCSLEGF*SPVKVPNCWRV
Trigger: CACTCTCCAGCAGTTAGGCACCTTAACTGGAGACCAGAAACCTTCCAGAGAACACAGGGCTGCATCCCGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
3UTR CCA 72 bp CTCATCAGGCCCTGGCCAGGGCAACGATCAGCGCCTTaGAAATTTTACCCTGTGTTCGGCAACTTCGTGTGT +
Preference number: 3 (lower is better)
Translates to: LIRPWPGQRSAP*KFYPVFGNFVC
Trigger: ACACACGAAGTTGCCGAACACAGGGTAAAATTTCCAAGGCGCTGATCGTTGCCCTGGCCAGGGCCTGATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
3UTR TCA 72 bp CACCTCTCTCTTCCCCGACTGGGATGGAAACCAGACTaGTTTCTCCCAACTATGCCAAACTGGCCCATCCAT +
Preference number: 3 (lower is better)
Translates to: HLSLPRLGWKPD*FLPTMPNWPIH
Trigger: ATGGATGGGCCAGTTTGGCATAGTTGGGAGAAATCAGTCTGGTTTCCATCCCAGTCGGGGAAGAGAGAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
3UTR CCA 72 bp TTCAGAGGGTTGCTCGGGATGCAGCCCTGTGTTCTCTaGAAGGTTTCTGGTCTCCAGTTAAGGTGCCTAACT +
Preference number: 3 (lower is better)
Translates to: FRGLLGMQPCVL*KVSGLQLRCLT
Trigger: AGTTAGGCACCTTAACTGGAGACCAGAAACCTTCCAGAGAACACAGGGCTGCATCCCGAGCAACCCTCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
3UTR-3UTR CAA 90 bp TTGGTAGCAAGCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGGCAGGTTTCTACCCTaGAGGCCCACAGGAGGTTGG +
Preference number: 3 (lower is better)
Translates to: LVASSSDHFNTDKSNSVAGRFLP*RPTGGW
Trigger: CCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCC...AGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGCTTGCTACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
3UTR-3UTR CAA 90 bp GTAGCAAGCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAAGGCAGGTTTCTACCCTaGAGGCCCACAGGAGGTTGG +
Preference number: 3 (lower is better)
Translates to: VASSSDHFNTDKSNSVAEGRFLP*RPTGGW
Trigger: CCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCC...TTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGCTTGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
3UTR-3UTR CAA 90 bp CAGGCCCTGGCCAGGGCAACGATCAGCGCCTTGGAAATTTTACCCTGTGTTCGGAATGTAGAGAGTGCCTaGGAAACATTTAAGTGTATC +
Preference number: 3 (lower is better)
Translates to: QALARATISALEILPCVRNVESA*ETFKCI
Trigger: GATACACTTAAATGTTTCCAAGGCACTCTCTACATT...CCGAACACAGGGTAAAATTTCCAAGGCGCTGATCGTTGCCCTGGCCAGGGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
3UTR GCA 72 bp AGTCTATCGGGAAACCAGGCAACCAGGAAGAAGCAATaGCCACTTCATCTGTATGAATCCACTCCCGAGACA +
Preference number: 3 (lower is better)
Translates to: SLSGNQATRKKQ*PLHLYESTPET
Trigger: TGTCTCGGGAGTGGATTCATACAGATGAAGTGGGCATTGCTTCTTCCTGGTTGCCTGGTTTCCCGATAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
3UTR-3UTR CAA 90 bp ACGATCAGCGCCTTGGAAATTTTACCCTGTGTTCGGCAACTTCGTGTGTTCTTCGCCCAGCCAATCTACTaGAAGAGTGGCTCTGTGATA +
Preference number: 3 (lower is better)
Translates to: TISALEILPCVRQLRVFFAQPIY*KSGSVI
Trigger: TATCACAGAGCCACTCTTCAAGTAGATTGGCTGGGC...GAAGAACACACGAAGTTGCCGAACACAGGGTAAAATTTCCAAGGCGCTGATCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
3UTR TCA 72 bp TTCAAAGCCCAATCGCCCCAAACCCCCTGGACAGAATaGGCGACATTAAGAAATTCCTTGGCAACAGAACTC +
Preference number: 3 (lower is better)
Translates to: FKAQSPQTPWTE*ATLRNSLATEL
Trigger: GAGTTCTGTTGCCAAGGAATTTCTTAATGTCGCTCATTCTGTCCAGGGGGTTTGGGGCGATTGGGCTTTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
3UTR-3UTR CAA 90 bp GGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCCTGGAACATGGCAGGTTTCTACCCTaGAGGCCCACAGGAGGTTGG +
Preference number: 3 (lower is better)
Translates to: GYFVMVSWANIYISFLEHGRFLP*RPTGGW
Trigger: CCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCC...ATGTTCCAGGAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
3UTR-3UTR CAA 90 bp AAAAGGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCCCCTTCTTCAGAGGGTaGCTCGGGATGCAGCCCTGT +
Preference number: 3 (lower is better)
Translates to: KRLGYFVMVSWANIYISFPFFRG*LGMQPC
Trigger: ACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAGGG...GAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
3UTR-3UTR CAA 90 bp ACTTGTTATTGTGGATCCTATTCACATCTTTCGGAACAACATGATCGATCTGTACCCTTCTTCAGAGGGTaGCTCGGGATGCAGCCCTGT +
Preference number: 3 (lower is better)
Translates to: TCYCGSYSHLSEQHDRSVPFFRG*LGMQPC
Trigger: ACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAGGG...TACAGATCGATCATGTTGTTCCGAAAGATGTGAATAGGATCCACAATAACAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
3UTR-3UTR CAA 90 bp TGTTTGTGGCAGACAGAATCCAAAATGGCTAATTTCCTAATCCCGATGCTCTGTCTCCCCCGACCCAATTaGGCCTTCCTTTCTCAAAAC +
Preference number: 3 (lower is better)
Translates to: CLWQTESKMANFLIPMLCLPRPN*AFLSQN
Trigger: GTTTTGAGAAAGGAAGGCCAAATTGGGTCGGGGGAG...ACAGAGCATCGGGATTAGGAAATTAGCCATTTTGGATTCTGTCTGCCACAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
3UTR-3UTR CAA 90 bp CTCCAAAATGATTTATACTTGCTGTCTGGGCATCAAAAATTTCAAACCAGTTTGGGCAGGTTTCTACCCTaGAGGCCCACAGGAGGTTGG +
Preference number: 3 (lower is better)
Translates to: LQNDLYLLSGHQKFQTSLGRFLP*RPTGGW
Trigger: CCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCC...CAAACTGGTTTGAAATTTTTGATGCCCAGACAGCAAGTATAAATCATTTTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
3UTR GCA 72 bp AAGAAAGGAGGGTGTGTGTCAGGGCAATCCTATACATaGATCACAAAAGACCTTCAGGTCAGGACTTACATT +
Preference number: 3 (lower is better)
Translates to: KKGGCVSGQSYT*ITKDLQVRTYI
Trigger: AATGTAAGTCCTGACCTGAAGGTCTTTTGTGATGCATGTATAGGATTGCCCTGACACACACCCTCCTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
3UTR GCA 72 bp AGTGGCATGAAGGGGAGTGCATACAAAAACACACAATaGCAGAAGTGCTTGAAGCAGAAATCTACACTTAGT +
Preference number: 3 (lower is better)
Translates to: SGMKGSAYKNTQ*QKCLKQKSTLS
Trigger: ACTAAGTGTAGATTTCTGCTTCAAGCACTTCTGGCATTGTGTGTTTTTGTATGCACTCCCCTTCATGCCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
3UTR GCA 72 bp AAGTTGCTGGCTGACAAAAAGATCTGTAACCCTTGGTaGCACCAGGCAATCCATCACCAATTGAATTACTAT +
Preference number: 3 (lower is better)
Translates to: KLLADKKICNPW*HQAIHHQLNYY
Trigger: ATAGTAATTCAATTGGTGATGGATTGCCTGGTGGCACCAAGGGTTACAGATCTTTTTGTCAGCCAGCAACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
3UTR CCA 72 bp CCCAAATTACTCTCAAAAGGCTGGGCTATTTTGTCATaGTGTCTTGGGCTAACATCTATATTTCATTCCTGG +
Preference number: 3 (lower is better)
Translates to: PKLLSKGWAILS*CLGLTSIFHSW
Trigger: CCAGGAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCTTTTGAGAGTAATTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
3UTR-3UTR CAA 90 bp CTGGAACATTGCTATCAAAATCTAAAGCCTAATTCCCTTCTTCAGAGGGTTGCTAAAACTTCTCACAGATaGGTAGCAAGCAGTTCAGAC +
Preference number: 3 (lower is better)
Translates to: LEHCYQNLKPNSLLQRVAKTSHR*VASSSD
Trigger: GTCTGAACTGCTTGCTACCAATCTGTGAGAAGTTTT...AGCAACCCTCTGAAGAAGGGAATTAGGCTTTAGATTTTGATAGCAATGTTCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
3UTR TCA 72 bp GTAACCCTTGGTGCCACCAGGCAATCCATCACCAATTaGATTACTATGAACCAAGAGGTCTTAATTTTAAAA +
Preference number: 3 (lower is better)
Translates to: VTLGATRQSITN*ITMNQEVLILK
Trigger: TTTTAAAATTAAGACCTCTTGGTTCATAGTAATTCAATTGGTGATGGATTGCCTGGTGGCACCAAGGGTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
3UTR TCA 72 bp TTCATGTTCTATACAGCAGCCAACACAAAGTCCAGCTaGGATGCTCTTGATTATGTGTACAAATTATCAAAC +
Preference number: 3 (lower is better)
Translates to: FMFYTAANTKSS*DALDYVYKLSN
Trigger: GTTTGATAATTTGTACACATAATCAAGAGCATCTCAGCTGGACTTTGTGTTGGCTGCTGTATAGAACATGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR GCA 90 bp CTTCTTCAGAGGGTTGCTCGGGATGCAGCCCTGTGTTCTCTGGAAGGTTTCTGGCCCGACCGTCGCCATTaGGGCGGCCGAGGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: LLQRVARDAALCSLEGFWPDRRH*GGRGGG
Trigger: GCCTCCACCTCGGCCGCCGCAATGGCGACGGTCGGG...CCAGAAACCTTCCAGAGAACACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp TCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGCCCGACCGTCGCCATTaGGGCGGCCGAGGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: SLKQQPGRFLPLRPTGGWPDRRH*GGRGGG
Trigger: GCCTCCACCTCGGCCGCCGCAATGGCGACGGTCGGG...CCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp TCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTCGGGATGCGGGTCCCTaGGAGGCTGCGGTGGTTGCT +
Preference number: 4 (lower is better)
Translates to: SSLKQQPGRFLPLRPTGGRDAGP*EAAVVA
Trigger: AGCAACCACCGCAGCCTCTCAGGGACCCGCATCCCG...ACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp ACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTTTGGTGCGGCTCCTGTaGCGTTCTAGGAGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: TARQVSTLEAHRRLGKQTLVRLL*RSRRGG
Trigger: CCCGCCCCTCCTAGAACGTCACAGGAGCCGCACCAA...AGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp TCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTGCACTCCCACCTTGCTaGGCAGGGCAGCCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: SSLKQQPGRFLPLRPTGGALPPC*AGQPGG
Trigger: GCCTCCAGGCTGCCCTGCTCAGCAAGGTGGGAGTGC...ACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp CAGGCCCTGGCCAGGGCAACGATCAGCGCCTTGGAAATTTTACCCTGTGTTCGGGAGAAGCTGGCTCAGTaGCAGGCAGGGGAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: QALARATISALEILPCVREKLAQ*QAGEGV
Trigger: CACACCCTCCCCTGCCTGCCACTGAGCCAGCTTCTC...CCGAACACAGGGTAAAATTTCCAAGGCGCTGATCGTTGCCCTGGCCAGGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CCA 90 bp ACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTGGGCCCCTCCCTGACTaGTCATGCCGGACGTTCACC +
Preference number: 4 (lower is better)
Translates to: TARQVSTLEAHRRLGKQTGPLPD*SCRTFT
Trigger: GGTGAACGTCCGGCATGACCAGTCAGGGAGGGGCCC...AGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp GCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTCAAGGCTGCGGTGGTTGCTaGGAGTCCGGATGGCGAATC +
Preference number: 4 (lower is better)
Translates to: ARQVSTLEAHRRLGKQTQGCGGC*ESGWRI
Trigger: GATTCGCCATCCGGACTCTCAGCAACCACCGCAGCC...TTGAGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp TCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTTGGTGCGGCTCCTGTaGCGTTCTAGGAGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: SSLKQQPGRFLPLRPTGGLVRLL*RSRRGG
Trigger: CCCGCCCCTCCTAGAACGTCACAGGAGCCGCACCAA...ACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp CTCCCACCCTCCCCCGACCCAATTTGGCCTTCCTTTCTCAAAACTAGCTTGCATGCACTCCCACCTTGCTaGGCAGGGCAGCCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: LPPSPDPIWPSFLKTSLHALPPC*AGQPGG
Trigger: GCCTCCAGGCTGCCCTGCTCAGCAAGGTGGGAGTGC...ATGCAAGCTAGTTTTGAGAAAGGAAGGCCAAATTGGGTCGGGGGAGGGTGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR GCA 90 bp GCTGAGTGGAGGTGTAACTTGTCCTCAAAAGTGTCCGCATTATTCCTCCCCGTGGACTGGGCAGAGGCCTaGGCTCCCCGACCGTCGCCA +
Preference number: 4 (lower is better)
Translates to: AEWRCNLSSKVSALFLPVDWAEA*APRPSP
Trigger: TGGCGACGGTCGGGGAGCGCAGGCCTCTGCCCAGTC...CACGGGGAGGAATAATGCGGACACTTTTGAGGACAAGTTACACCTCCACTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp GCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTCAAGCATCACTTCAGGACTaGGCAGAGGCCTGCGCTCCC +
Preference number: 4 (lower is better)
Translates to: ARQVSTLEAHRRLGKQTQASLQD*AEACAP
Trigger: GGGAGCGCAGGCCTCTGCCCAGTCCTGAAGTGATGC...TTGAGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp GCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTCAAGCAGCCTGGAGGCCTTaGAAGACTGGGGGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: ARQVSTLEAHRRLGKQTQAAWRP*KTGGVR
Trigger: CCTCACACCCCCAGTCTTCCAAGGCCTCCAGGCTGC...TTGAGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp CCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTCAAAGGGCCCCTCCCTGACTaGTCATGCCGGACGTTCACC +
Preference number: 4 (lower is better)
Translates to: PGRFLPLRPTGGWENRLKGPLPD*SCRTFT
Trigger: GGTGAACGTCCGGCATGACCAGTCAGGGAGGGGCCC...TTTGAGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp TCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTGGGCCCCTCCCTGACTaGTCATGCCGGACGTTCACC +
Preference number: 4 (lower is better)
Translates to: SSLKQQPGRFLPLRPTGGGPLPD*SCRTFT
Trigger: GGTGAACGTCCGGCATGACCAGTCAGGGAGGGGCCC...ACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp TCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGAAATGCAGCCACCTATaGAGGAGCCGGCCGGCCGGC +
Preference number: 4 (lower is better)
Translates to: SLKQQPGRFLPLRPTGGWKCSHL*RSRPAG
Trigger: GCCGGCCGGCCGGCTCCTCCATAGGTGGCTGCATTT...CCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487717.5
CDS-3UTR TCA 90 bp CAGGCCCTGGCCAGGGCAACGATCAGCGCCTTGGAAATTTTACCCTGTGTTCGGGAAGGAATCACTCCGTaGGGGTTTTGGTGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: QALARATISALEILPCVREGITP*GFWCGS
Trigger: GGAGCCGCACCAAAACCCTCACGGAGTGATTCCTTC...CCGAACACAGGGTAAAATTTCCAAGGCGCTGATCGTTGCCCTGGCCAGGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR TCA 90 bp GCTGAGTGGAGGTGTAACTTGTCCTCAAAAGTGTCCGCATTATTCCTCCCCGTGGCACTCCCACCTTGCTaGGCAGGGCAGCCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: AEWRCNLSSKVSALFLPVALPPC*AGQPGG
Trigger: GCCTCCAGGCTGCCCTGCTCAGCAAGGTGGGAGTGC...CACGGGGAGGAATAATGCGGACACTTTTGAGGACAAGTTACACCTCCACTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp TCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTGCATCACTTCAGGACTaGGCAGAGGCCTGCGCTCCC +
Preference number: 4 (lower is better)
Translates to: SSLKQQPGRFLPLRPTGGASLQD*AEACAP
Trigger: GGGAGCGCAGGCCTCTGCCCAGTCCTGAAGTGATGC...ACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp ACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTCTGGAGGAGGGTCAATaGGGGCACTCCCACCTTGCT +
Preference number: 4 (lower is better)
Translates to: TARQVSTLEAHRRLGKQTLEEGQ*GHSHLA
Trigger: AGCAAGGTGGGAGTGCCCCCATTGACCCTCCTCCAG...AGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp CAGGCCCTGGCCAGGGCAACGATCAGCGCCTTGGAAATTTTACCCTGTGTTCGGGGAGATGCAGGTAGATaGGAGCAGGACTGGGGATGT +
Preference number: 4 (lower is better)
Translates to: QALARATISALEILPCVRGDAGR*EQDWGC
Trigger: ACATCCCCAGTCCTGCTCTCATCTACCTGCATCTCC...CCGAACACAGGGTAAAATTTCCAAGGCGCTGATCGTTGCCCTGGCCAGGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR TCA 90 bp GCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTCAAAGGATCCATCGCCCCTaGAGCAGCAGGCTGTGCATT +
Preference number: 4 (lower is better)
Translates to: ARQVSTLEAHRRLGKQTQRIHRP*SSRLCI
Trigger: AATGCACAGCCTGCTGCTTCAGGGGCGATGGATCCT...TTGAGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp ATCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGGCAGGTTTCTACCCTTaGGGCCCACAGGAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: ILVKTTARQVSTLEAHRRAGFYP*GPQEVG
Trigger: CCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGC...CCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp ACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTGGAGCTTTCAGCTCCTaGGCAGAAGGGCTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: TARQVSTLEAHRRLGKQTGAFSS*AEGLLW
Trigger: CCAAAGCAGCCCTTCTGCGCAGGAGCTGAAAGCTCC...AGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484332.1
CDS-3UTR CCA 90 bp CCCTTCTTCAGAGGGTTGCTCGGGATGCAGCCCTGTGTTCTCTGGAAGGTTTCTCTGGAGGAGGGTCAATaGGGGCACTCCCACCTTGCT +
Preference number: 4 (lower is better)
Translates to: PFFRGLLGMQPCVLWKVSLEEGQ*GHSHLA
Trigger: AGCAAGGTGGGAGTGCCCCCATTGACCCTCCTCCAG...AGAAACCTTCCAGAGAACACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp TCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTGCCTGGTGTTCCCCCTaGGCTGCAGTTTCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: SSLKQQPGRFLPLRPTGGAWCSP*AAVSLW
Trigger: CCAAAGAGAAACTGCAGCTCAGGGGGAACACCAGGC...ACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp CATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTCGGGATGCGGGTCCCTaGGAGGCTGCGGTGGTTGCT +
Preference number: 4 (lower is better)
Translates to: HSFREILVKTTARQVSTLRDAGP*EAAVVA
Trigger: AGCAACCACCGCAGCCTCTCAGGGACCCGCATCCCG...AAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp CATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGCACTCCCACCTTGCTaGGCAGGGCAGCCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: HSFREILVKTTARQVSTLALPPC*AGQPGG
Trigger: GCCTCCAGGCTGCCCTGCTCAGCAAGGTGGGAGTGC...AAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp TCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTAGGATCCATCGCCCCTaGAGCAGCAGGCTGTGCATT +
Preference number: 4 (lower is better)
Translates to: SSLKQQPGRFLPLRPTGGRIHRP*SSRLCI
Trigger: AATGCACAGCCTGCTGCTTCAGGGGCGATGGATCCT...ACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp ACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTGAGGAGGAGGAAGAGTaGACCAACAGTGGGGAACTG +
Preference number: 4 (lower is better)
Translates to: TARQVSTLEAHRRLGKQTEEEEE*TNSGEL
Trigger: CAGTTCCCCACTGTTGGTTCACTCTTCCTCCTCCTC...AGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp GCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTCAAGAGGAGGAGGAAGAGTaGACCAACAGTGGGGAACTG +
Preference number: 4 (lower is better)
Translates to: ARQVSTLEAHRRLGKQTQEEEEE*TNSGEL
Trigger: CAGTTCCCCACTGTTGGTTCACTCTTCCTCCTCCTC...TTGAGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp ATCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGGGAAGATGTTACCGTTaGGGGGTAGGGAGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: ILVKTTARQVSTLEAHRRGRCYR*GVGRPR
Trigger: TCTGGGCCTCCCTACCCCTCAACGGTAACATCTTCC...CCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp TCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGGAAGATGTTACCGTTaGGGGGTAGGGAGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: SLKQQPGRFLPLRPTGGWGRCYR*GVGRPR
Trigger: TCTGGGCCTCCCTACCCCTCAACGGTAACATCTTCC...CCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp CAGGCCCTGGCCAGGGCAACGATCAGCGCCTTGGAAATTTTACCCTGTGTTCGGGGAGGTCAAATCAGCTaGACTGGTGCCTGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: QALARATISALEILPCVRGGQIS*TGACFL
Trigger: GAGGAAACAGGCACCAGTGCAGCTGATTTGACCTCC...CCGAACACAGGGTAAAATTTCCAAGGCGCTGATCGTTGCCCTGGCCAGGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295900.10
CDS-3UTR GCA 90 bp TCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAGGGTTGCTCGGGATaGAGCCCTGTGTTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: SLKQQPGRFLPLRPTGGWEGCSG*SPVFSG
Trigger: TCCAGAGAACACAGGGCTGCATCCCGAGCAACCCTC...CCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp CTTCTTCAGAGGGTTGCTCGGGATGCAGCCCTGTGTTCTCTGGAAGGTTTCTGGGAGGGTTGCTCGGGATaGAGCCCTGTGTTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: LLQRVARDAALCSLEGFWEGCSG*SPVFSG
Trigger: TCCAGAGAACACAGGGCTGCATCCCGAGCAACCCTC...CCAGAAACCTTCCAGAGAACACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp ACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTAGTAGCAGGACAGGTTaGCCCCACCGCAGATTTCAG +
Preference number: 4 (lower is better)
Translates to: TARQVSTLEAHRRLGKQTSSRTG*PHRRFQ
Trigger: CTGAAATCTGCGGTGGGGCCAACCTGTCCTGCTACT...AGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp CAGGCCCTGGCCAGGGCAACGATCAGCGCCTTGGAAATTTTACCCTGTGTTCGGTGGACAGCCCTGCGCTaGGTTAAGGAATGTGTCTTG +
Preference number: 4 (lower is better)
Translates to: QALARATISALEILPCVRWTALR*VKECVL
Trigger: CAAGACACATTCCTTAACCCAGCGCAGGGCTGTCCA...CCGAACACAGGGTAAAATTTCCAAGGCGCTGATCGTTGCCCTGGCCAGGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CCA 90 bp TCAGCGCCTTGGAAATTTTACCCTGTGTTCGGCAACTTCGTGTGTTCTTCTAAGTTCAGATCTGGCGGCTaGCTGCGGCCTCCGGGGCGG +
Preference number: 4 (lower is better)
Translates to: SAPWKFYPVFGNFVCSSKFRSGG*LRPPGR
Trigger: CCGCCCCGGAGGCCGCAGCCAGCCGCCAGATCTGAA...CTTAGAAGAACACACGAAGTTGCCGAACACAGGGTAAAATTTCCAAGGCGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674280.1
CDS-3UTR TCA 90 bp TCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTGGTTGGCTTTGGTATTaGGGGGCAGTTAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SSLKQQPGRFLPLRPTGGGWLWY*GAVKAR
Trigger: CCTGGCCTTAACTGCCCCTCAATACCAAAGCCAACC...ACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp ACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTCTGCTGCCAGATAGCTaGCTCCACATTGTGATGTCG +
Preference number: 4 (lower is better)
Translates to: TARQVSTLEAHRRLGKQTLLPDS*LHIVMS
Trigger: CGACATCACAATGTGGAGTCAGCTATCTGGCAGCAG...AGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp TCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTGGAGATGCAGGTAGATaGGAGCAGGACTGGGGATGT +
Preference number: 4 (lower is better)
Translates to: SSLKQQPGRFLPLRPTGGGDAGR*EQDWGC
Trigger: ACATCCCCAGTCCTGCTCTCATCTACCTGCATCTCC...ACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp CCCTTCTTCAGAGGGTTGCTCGGGATGCAGCCCTGTGTTCTCTGGAAGGTTTCTGAGGAGGAGGAAGAGTaGACCAACAGTGGGGAACTG +
Preference number: 4 (lower is better)
Translates to: PFFRGLLGMQPCVLWKVSEEEEE*TNSGEL
Trigger: CAGTTCCCCACTGTTGGTTCACTCTTCCTCCTCCTC...AGAAACCTTCCAGAGAACACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp CTGGAAGGTTTCTGGTCTCCAGTTAAGGTGCCTAACTGCTGGAGAGTGACCTACGCAGGTTTCTACCCTTaGGGCCCACAGGAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: LEGFWSPVKVPNCWRVTYAGFYP*GPQEVG
Trigger: CCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGC...GTAGGTCACTCTCCAGCAGTTAGGCACCTTAACTGGAGACCAGAAACCTTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp ACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTCACTGGAAGAACGGTTaGTTCCACTTGCACTGCCTC +
Preference number: 4 (lower is better)
Translates to: TARQVSTLEAHRRLGKQTHWKNG*FHLHCL
Trigger: GAGGCAGTGCAAGTGGAAGCAACCGTTCTTCCAGTG...AGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp CCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTCAAATACCCTGGACAGCCCTaGGCTGGGTTAAGGAATGTG +
Preference number: 4 (lower is better)
Translates to: PGRFLPLRPTGGWENRLKYPGQP*AGLRNV
Trigger: CACATTCCTTAACCCAGCGCAGGGCTGTCCAGGGTA...TTTGAGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp CTTCTTCAGAGGGTTGCTCGGGATGCAGCCCTGTGTTCTCTGGAAGGTTTCTGGTACCCTGGACAGCCCTaGGCTGGGTTAAGGAATGTG +
Preference number: 4 (lower is better)
Translates to: LLQRVARDAALCSLEGFWYPGQP*AGLRNV
Trigger: CACATTCCTTAACCCAGCGCAGGGCTGTCCAGGGTA...CCAGAAACCTTCCAGAGAACACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp GCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTCAAGCCGGCTCCCAAATGTaGAAAAAGATGCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: ARQVSTLEAHRRLGKQTQAGSQM*KKMLAE
Trigger: CTCAGCCAGCATCTTTTTGCACATTTGGGAGCCGGC...TTGAGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp TCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGAGAGACGGTGGCTGCTaGCAGATAGCTGACTCCACA +
Preference number: 4 (lower is better)
Translates to: SLKQQPGRFLPLRPTGGWRDGGC*QIADST
Trigger: TGTGGAGTCAGCTATCTGGCAGCAGCCACCGTCTCT...CCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp TCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGTGTAGAGACGGTGGCTaGTGCCAGATAGCTGACTCC +
Preference number: 4 (lower is better)
Translates to: SLKQQPGRFLPLRPTGGWCRDGG*CQIADS
Trigger: GGAGTCAGCTATCTGGCAGCAGCCACCGTCTCTACA...CCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp ACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTGTCTGGATTGCATACTaGACACAGGATCCATCGCCC +
Preference number: 4 (lower is better)
Translates to: TARQVSTLEAHRRLGKQTVWIAY*TQDPSP
Trigger: GGGCGATGGATCCTGTGTGCAGTATGCAATCCAGAC...AGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp TCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGCTCCCTGACTGGTCATaGCGGACGTTCACCGCATTT +
Preference number: 4 (lower is better)
Translates to: SLKQQPGRFLPLRPTGGWLPDWS*RTFTAF
Trigger: AAATGCGGTGAACGTCCGGCATGACCAGTCAGGGAG...CCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp ACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTTGGACAGCCCTGCGCTaGGTTAAGGAATGTGTCTTG +
Preference number: 4 (lower is better)
Translates to: TARQVSTLEAHRRLGKQTWTALR*VKECVL
Trigger: CAAGACACATTCCTTAACCCAGCGCAGGGCTGTCCA...AGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp TCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGCTTCGCCCTCCTCACTaGATAACCGAGAAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: SLKQQPGRFLPLRPTGGWLRPPH*ITEKLA
Trigger: AGCCAGCTTCTCGGTTATCCAGTGAGGAGGGCGAAG...CCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp GCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTCAAGGTGAGGAATACGTGTaGAGATGGGTGAGGTGGTAC +
Preference number: 4 (lower is better)
Translates to: ARQVSTLEAHRRLGKQTQGEEYV*RWVRWY
Trigger: GTACCACCTCACCCATCTCCACACGTATTCCTCACC...TTGAGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp TCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGAAAGGCCAGAGGGCGTaGAAGGGGATGAGGATGAAG +
Preference number: 4 (lower is better)
Translates to: SLKQQPGRFLPLRPTGGWKGQRA*KGMRMK
Trigger: CTTCATCCTCATCCCCTTCCACGCCCTCTGGCCTTT...CCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp CCCTTCTTCAGAGGGTTGCTCGGGATGCAGCCCTGTGTTCTCTGGAAGGTTTCTAAAGGCCAGAGGGCGTaGAAGGGGATGAGGATGAAG +
Preference number: 4 (lower is better)
Translates to: PFFRGLLGMQPCVLWKVSKGQRA*KGMRMK
Trigger: CTTCATCCTCATCCCCTTCCACGCCCTCTGGCCTTT...AGAAACCTTCCAGAGAACACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp TCCAGAGTGCTGAGTGGAGGTGTAACTTGTCCTCAAAAGTGTCCGCATTATTCCGGGCCCCTCCCTGACTaGTCATGCCGGACGTTCACC +
Preference number: 4 (lower is better)
Translates to: SRVLSGGVTCPQKCPHYSGPLPD*SCRTFT
Trigger: GGTGAACGTCCGGCATGACCAGTCAGGGAGGGGCCC...GGAATAATGCGGACACTTTTGAGGACAAGTTACACCTCCACTCAGCACTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp GCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTCAAAGGCCCACAGGAGGTTaGGAAAACAGACTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: ARQVSTLEAHRRLGKQTQRPTGG*ENRLKG
Trigger: GCCTTTGAGTCTGTTTTCCCAACCTCCTGTGGGCCT...TTGAGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp CCTTCTTCAGAGGGTTGCTCGGGATGCAGCCCTGTGTTCTCTGGAAGGTTTCTGCCAACTCCCTTTCCTTaGTGTCTGCTCTCGTCCCCA +
Preference number: 4 (lower is better)
Translates to: PSSEGCSGCSPVFSGRFLPTPFP*CLLSSP
Trigger: TGGGGACGAGAGCAGACACCAAGGAAAGGGAGTTGG...CAGAAACCTTCCAGAGAACACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
3UTR CAA 72 bp TCTCATCAGGCCCTGGCCAGGGCAACGATCAGCGCCTaGGAAATTTTACCCTGTGTTCGGCAACTTCGTGTG +
Preference number: 4 (lower is better)
Translates to: SHQALARATISA*EILPCVRQLRV
Trigger: CACACGAAGTTGCCGAACACAGGGTAAAATTTCCAAGGCGCTGATCGTTGCCCTGGCCAGGGCCTGATGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR TCA 90 bp GCTGAGTGGAGGTGTAACTTGTCCTCAAAAGTGTCCGCATTATTCCTCCCCGTGGCCTGGTGTTCCCCCTaGGCTGCAGTTTCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: AEWRCNLSSKVSALFLPVAWCSP*AAVSLW
Trigger: CCAAAGAGAAACTGCAGCTCAGGGGGAACACCAGGC...CACGGGGAGGAATAATGCGGACACTTTTGAGGACAAGTTACACCTCCACTCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp GCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTCAATCACAGAGGGTGTCATaGTTCTACCATGGGGAACTC +
Preference number: 4 (lower is better)
Translates to: ARQVSTLEAHRRLGKQTQSQRVS*FYHGEL
Trigger: GAGTTCCCCATGGTAGAATCATGACACCCTCTGTGA...TTGAGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp CTCCCACCCTCCCCCGACCCAATTTGGCCTTCCTTTCTCAAAACTAGCTTGCATGGTTGGCTTTGGTATTaGGGGGCAGTTAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LPPSPDPIWPSFLKTSLHGWLWY*GAVKAR
Trigger: CCTGGCCTTAACTGCCCCTCAATACCAAAGCCAACC...ATGCAAGCTAGTTTTGAGAAAGGAAGGCCAAATTGGGTCGGGGGAGGGTGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR TCA 90 bp CATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGGCTGCGGTGGTTGCTaGGAGTCCGGATGGCGAATC +
Preference number: 4 (lower is better)
Translates to: HSFREILVKTTARQVSTLGCGGC*ESGWRI
Trigger: GATTCGCCATCCGGACTCTCAGCAACCACCGCAGCC...AAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp ACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTACAGAGTTTGTCCGGTaGGGAATACGTGTGGAGATG +
Preference number: 4 (lower is better)
Translates to: TARQVSTLEAHRRLGKQTTEFVR*GIRVEM
Trigger: CATCTCCACACGTATTCCTCACCGGACAAACTCTGT...AGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp GCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTCAAGCTGACTCCACATTGTaGTGTCGGCACAGAGTTTGT +
Preference number: 4 (lower is better)
Translates to: ARQVSTLEAHRRLGKQTQADSTL*CRHRVC
Trigger: ACAAACTCTGTGCCGACATCACAATGTGGAGTCAGC...TTGAGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp CCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTCAAATTTGCGTTTCTTTCCTaGGCCGCCACTGGTACTGCT +
Preference number: 4 (lower is better)
Translates to: PGRFLPLRPTGGWENRLKFAFLS*AATGTA
Trigger: AGCAGTACCAGTGGCGGCTCAGGAAAGAAACGCAAA...TTTGAGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp GCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTCAATATTCGTCACACAGTTaGGGCCGATGCTATGGGAAG +
Preference number: 4 (lower is better)
Translates to: ARQVSTLEAHRRLGKQTQYSSHS*GRCYGK
Trigger: CTTCCCATAGCATCGGCCTCAACTGTGTGACGAATA...TTGAGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp ATCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTCACACTCATCCTCTTaGTGGATTCAGCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: ILVKTTARQVSTLEAHRRSHSSS*WIQQGS
Trigger: GGAGCCCTGCTGAATCCATCAAGAGGATGAGTGTGA...CCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp CTCACTGCTAGAGACATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCGGCGCAGGTTTCTACCCTTaGGGCCCACAGGAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: LTARDIASGKSSLKQQPGAGFYP*GPQEVG
Trigger: CCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGC...GCCGGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATGTCTCTAGCAGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp ACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACACACCCGACCGTCGCCATTaGGGCGGCCGAGGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: TMKLNICLQTNQPTQPNTPDRRH*GGRGGG
Trigger: GCCTCCACCTCGGCCGCCGCAATGGCGACGGTCGGG...TGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR GCA 90 bp GACACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACGACTGGGCAGAGGCCTaGGCTCCCCGACCGTCGCCA +
Preference number: 4 (lower is better)
Translates to: DTMKLNICLQTNQPTQPNDWAEA*APRPSP
Trigger: TGGCGACGGTCGGGGAGCGCAGGCCTCTGCCCAGTC...GTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR GCA 90 bp CCAAAACATTCTTTTGCCCAGCCAATCTACTTGAAGAGTGGCTCTGTGATATACGACTGGGCAGAGGCCTaGGCTCCCCGACCGTCGCCA +
Preference number: 4 (lower is better)
Translates to: PKHSFAQPIYLKSGSVIYDWAEA*APRPSP
Trigger: TGGCGACGGTCGGGGAGCGCAGGCCTCTGCCCAGTC...GTATATCACAGAGCCACTCTTCAAGTAGATTGGCTGGGCAAAAGAATGTTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp TCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTCACTGGAAGAACGGTTaGTTCCACTTGCACTGCCTC +
Preference number: 4 (lower is better)
Translates to: SSLKQQPGRFLPLRPTGGHWKNG*FHLHCL
Trigger: GAGGCAGTGCAAGTGGAAGCAACCGTTCTTCCAGTG...ACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp ACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTGTGTTCCCCCTGAGCTaGAGTTTCTCTTTGGGTGAT +
Preference number: 4 (lower is better)
Translates to: TARQVSTLEAHRRLGKQTVFPLS*SFSLGD
Trigger: ATCACCCAAAGAGAAACTGCAGCTCAGGGGGAACAC...AGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp GCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTCAAGTGTTCCCCCTGAGCTaGAGTTTCTCTTTGGGTGAT +
Preference number: 4 (lower is better)
Translates to: ARQVSTLEAHRRLGKQTQVFPLS*SFSLGD
Trigger: ATCACCCAAAGAGAAACTGCAGCTCAGGGGGAACAC...TTGAGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp ACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTGTGCAGGAAGCCCTTTaGCATTCAGAATCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: TARQVSTLEAHRRLGKQTVQEAL*HSESVQ
Trigger: CTGGACAGATTCTGAATGGCAAAGGGCTTCCTGCAC...AGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp CTCCCACCCTCCCCCGACCCAATTTGGCCTTCCTTTCTCAAAACTAGCTTGCATAGAGACGGTGGCTGCTaGCAGATAGCTGACTCCACA +
Preference number: 4 (lower is better)
Translates to: LPPSPDPIWPSFLKTSLHRDGGC*QIADST
Trigger: TGTGGAGTCAGCTATCTGGCAGCAGCCACCGTCTCT...ATGCAAGCTAGTTTTGAGAAAGGAAGGCCAAATTGGGTCGGGGGAGGGTGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR GCA 90 bp CCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTCAAAGTCTGGATTGCATACTaGACACAGGATCCATCGCCC +
Preference number: 4 (lower is better)
Translates to: PGRFLPLRPTGGWENRLKVWIAY*TQDPSP
Trigger: GGGCGATGGATCCTGTGTGCAGTATGCAATCCAGAC...TTTGAGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp TTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAGTGCCCCTGGGATGGTaGCTGTGTGTTTCATGTGGA +
Preference number: 4 (lower is better)
Translates to: LKQQPGRFLPLRPTGGWEVPLGW*LCVSCG
Trigger: TCCACATGAAACACACAGGCACCATCCCAGGGGCAC...TTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp TTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAACAGCTGTCAGGGACGTaGCTTTGGCTGATGAAGGAG +
Preference number: 4 (lower is better)
Translates to: LKQQPGRFLPLRPTGGWEQLSGT*LWLMKE
Trigger: CTCCTTCATCAGCCAAAGGCACGTCCCTGACAGCTG...TTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp CTGGAAGGTTTCTGGTCTCCAGTTAAGGTGCCTAACTGCTGGAGAGTGACCTACGAGGGTTGCTCGGGATaGAGCCCTGTGTTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: LEGFWSPVKVPNCWRVTYEGCSG*SPVFSG
Trigger: TCCAGAGAACACAGGGCTGCATCCCGAGCAACCCTC...GTAGGTCACTCTCCAGCAGTTAGGCACCTTAACTGGAGACCAGAAACCTTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp GCTGAGTGGAGGTGTAACTTGTCCTCAAAAGTGTCCGCATTATTCCTCCCCGTGCCTTCTTCAGAGGGTTaGTCGGGATGCAGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: AEWRCNLSSKVSALFLPVPSSEG*SGCSPV
Trigger: CACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAGG...CACGGGGAGGAATAATGCGGACACTTTTGAGGACAAGTTACACCTCCACTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp ACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTTGGCAACAGAACTCTTaGAGGAAGACAGCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: TARQVSTLEAHRRLGKQTWQQNS*RKTAAL
Trigger: AAGGGCAGCTGTCTTCCTGCAAGAGTTCTGTTGCCA...AGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CCA 90 bp CAGGCCCTGGCCAGGGCAACGATCAGCGCCTTGGAAATTTTACCCTGTGTTCGGTCCGCTCCTTTTCTTTaGAGGGTAGGCCAAAAATCC +
Preference number: 4 (lower is better)
Translates to: QALARATISALEILPCVRSAPFL*RVGQKS
Trigger: GGATTTTTGGCCTACCCTCCAAAGAAAAGGAGCGGA...CCGAACACAGGGTAAAATTTCCAAGGCGCTGATCGTTGCCCTGGCCAGGGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CCA 90 bp CAGGCCCTGGCCAGGGCAACGATCAGCGCCTTGGAAATTTTACCCTGTGTTCGGTGCCTCCTTTGCTTTTaGACAGAGAAGGGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: QALARATISALEILPCVRCLLCF*TEKGRR
Trigger: CCTTCTTCCCTTCTCTGTCCAAAAGCAAAGGAGGCA...CCGAACACAGGGTAAAATTTCCAAGGCGCTGATCGTTGCCCTGGCCAGGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CCA 90 bp CATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGCAGCCTGGAGGCCTTaGAAGACTGGGGGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: HSFREILVKTTARQVSTLAAWRP*KTGGVR
Trigger: CCTCACACCCCCAGTCTTCCAAGGCCTCCAGGCTGC...AAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp TCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGGGTGTGGAGATTCATaGACTGGAGGAGGGTCAATG +
Preference number: 4 (lower is better)
Translates to: SLKQQPGRFLPLRPTGGWGCGDS*TGGGSM
Trigger: CATTGACCCTCCTCCAGTCCATGAATCTCCACACCC...CCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp CTTCTTCAGAGGGTTGCTCGGGATGCAGCCCTGTGTTCTCTGGAAGGTTTCTGGGGGTGTGGAGATTCATaGACTGGAGGAGGGTCAATG +
Preference number: 4 (lower is better)
Translates to: LLQRVARDAALCSLEGFWGCGDS*TGGGSM
Trigger: CATTGACCCTCCTCCAGTCCATGAATCTCCACACCC...CCAGAAACCTTCCAGAGAACACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp CATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGAAGCTGGCTCAGTaGCAGGCAGGGGAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: HSFREILVKTTARQVSTLEKLAQ*QAGEGV
Trigger: CACACCCTCCCCTGCCTGCCACTGAGCCAGCTTCTC...AAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp ACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTTTCCTGAGCCGCCACTaGTACTGCTACTGGCATTTT +
Preference number: 4 (lower is better)
Translates to: TARQVSTLEAHRRLGKQTFLSRH*YCYWHF
Trigger: AAAATGCCAGTAGCAGTACCAGTGGCGGCTCAGGAA...AGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp ATCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGAGAGGAGTGTGTGAGTaGGAAAAACTGCCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: ILVKTTARQVSTLEAHRRRGVCE*EKLPWE
Trigger: CTCCCACGGCAGTTTTTCCCACTCACACACTCCTCT...CCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp CTTCTTCAGAGGGTTGCTCGGGATGCAGCCCTGTGTTCTCTGGAAGGTTTCTGGTCAGGGACGTGCCTTTaGCTGATGAAGGAGGGAACT +
Preference number: 4 (lower is better)
Translates to: LLQRVARDAALCSLEGFWSGTCL*LMKEGT
Trigger: AGTTCCCTCCTTCATCAGCCAAAGGCACGTCCCTGA...CCAGAAACCTTCCAGAGAACACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp CCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTCAAATCAGGGACGTGCCTTTaGCTGATGAAGGAGGGAACT +
Preference number: 4 (lower is better)
Translates to: PGRFLPLRPTGGWENRLKSGTCL*LMKEGT
Trigger: AGTTCCCTCCTTCATCAGCCAAAGGCACGTCCCTGA...TTTGAGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp ACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTGTCCAGAGTGCTGAGTaGAGGTGTAACTTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: TARQVSTLEAHRRLGKQTVQSAE*RCNLSS
Trigger: TGAGGACAAGTTACACCTCCACTCAGCACTCTGGAC...AGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp ATCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGAGGCCCACAGGAGGTTaGGAAAACAGACTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: ILVKTTARQVSTLEAHRRRPTGG*ENRLKG
Trigger: GCCTTTGAGTCTGTTTTCCCAACCTCCTGTGGGCCT...CCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp CCTTCTTCAGAGGGTTGCTCGGGATGCAGCCCTGTGTTCTCTGGAAGGTTTCTGAGGCCCACAGGAGGTTaGGAAAACAGACTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: PSSEGCSGCSPVFSGRFLRPTGG*ENRLKG
Trigger: GCCTTTGAGTCTGTTTTCCCAACCTCCTGTGGGCCT...CAGAAACCTTCCAGAGAACACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp TCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGCAGCCCTGTGTTCTCTaGAAGGTTTCTGGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: SLKQQPGRFLPLRPTGGWQPCVL*KVSGLQ
Trigger: CTGGAGACCAGAAACCTTCCAGAGAACACAGGGCTG...CCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp GCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTCAATCTCTCTTCCCCGACTaGGATGGAAACCAGACTGAT +
Preference number: 4 (lower is better)
Translates to: ARQVSTLEAHRRLGKQTQSLFPD*DGNQTD
Trigger: ATCAGTCTGGTTTCCATCCCAGTCGGGGAAGAGAGA...TTGAGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR TCA 90 bp CATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAATTGGGTGCCGGGTaGGGACGATGGCAACACGCT +
Preference number: 4 (lower is better)
Translates to: HSFREILVKTTARQVSTLELGAG*GRWQHA
Trigger: AGCGTGTTGCCATCGTCCTCACCCGGCACCCAATTC...AAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295900.10
CDS-3UTR TCA 90 bp CTTCTTCAGAGGGTTGCTCGGGATGCAGCCCTGTGTTCTCTGGAAGGTTTCTGGTCACAGAGGGTGTCATaGTTCTACCATGGGGAACTC +
Preference number: 4 (lower is better)
Translates to: LLQRVARDAALCSLEGFWSQRVS*FYHGEL
Trigger: GAGTTCCCCATGGTAGAATCATGACACCCTCTGTGA...CCAGAAACCTTCCAGAGAACACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp TGTTTGTGGCAGACAGAATCCAAAATGGCTAATTTCCTAATCCCGATGCTCTGTCGGGATGCGGGTCCCTaGGAGGCTGCGGTGGTTGCT +
Preference number: 4 (lower is better)
Translates to: CLWQTESKMANFLIPMLCRDAGP*EAAVVA
Trigger: AGCAACCACCGCAGCCTCTCAGGGACCCGCATCCCG...ACAGAGCATCGGGATTAGGAAATTAGCCATTTTGGATTCTGTCTGCCACAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR TCA 90 bp ATCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGGGAAGACTGGGGGTGTaGGGTTTAGGTTTACTAGCT +
Preference number: 4 (lower is better)
Translates to: ILVKTTARQVSTLEAHRRGRLGV*GLGLLA
Trigger: AGCTAGTAAACCTAAACCTCACACCCCCAGTCTTCC...CCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp TTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAACTGCTGCCAGATAGCTaGCTCCACATTGTGATGTCG +
Preference number: 4 (lower is better)
Translates to: LKQQPGRFLPLRPTGGWELLPDS*LHIVMS
Trigger: CGACATCACAATGTGGAGTCAGCTATCTGGCAGCAG...TTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp TTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAATTTGCGTTTCTTTCCTaGGCCGCCACTGGTACTGCT +
Preference number: 4 (lower is better)
Translates to: LKQQPGRFLPLRPTGGWEFAFLS*AATGTA
Trigger: AGCAGTACCAGTGGCGGCTCAGGAAAGAAACGCAAA...TTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp CTCCCACCCTCCCCCGACCCAATTTGGCCTTCCTTTCTCAAAACTAGCTTGCATTTTGCGTTTCTTTCCTaGGCCGCCACTGGTACTGCT +
Preference number: 4 (lower is better)
Translates to: LPPSPDPIWPSFLKTSLHFAFLS*AATGTA
Trigger: AGCAGTACCAGTGGCGGCTCAGGAAAGAAACGCAAA...ATGCAAGCTAGTTTTGAGAAAGGAAGGCCAAATTGGGTCGGGGGAGGGTGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR GCA 90 bp ACAAAAACTTCTCACAGATTGGTAGCAAGCAGTTCAGACCACTTTAACACTGATCCCGACCGTCGCCATTaGGGCGGCCGAGGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: TKTSHRLVASSSDHFNTDPDRRH*GGRGGG
Trigger: GCCTCCACCTCGGCCGCCGCAATGGCGACGGTCGGG...ATCAGTGTTAAAGTGGTCTGAACTGCTTGCTACCAATCTGTGAGAAGTTTTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp TTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAACACTGGAAGAACGGTTaGTTCCACTTGCACTGCCTC +
Preference number: 4 (lower is better)
Translates to: LKQQPGRFLPLRPTGGWEHWKNG*FHLHCL
Trigger: GAGGCAGTGCAAGTGGAAGCAACCGTTCTTCCAGTG...TTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp ACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTAGCTGTGCATTCAGATaGTTCTCCACCATGAGGTTG +
Preference number: 4 (lower is better)
Translates to: TARQVSTLEAHRRLGKQTSCAFR*FSTMRL
Trigger: CAACCTCATGGTGGAGAAGCATCTGAATGCACAGCT...AGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp ATCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGGAGCTGGTACCGATTTaGTATTTGGGGAGATGCAGG +
Preference number: 4 (lower is better)
Translates to: ILVKTTARQVSTLEAHRRELVPI*YLGRCR
Trigger: CCTGCATCTCCCCAAATAGCAAATCGGTACCAGCTC...CCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp CCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTCAAAGAGCTGGTACCGATTTaGTATTTGGGGAGATGCAGG +
Preference number: 4 (lower is better)
Translates to: PGRFLPLRPTGGWENRLKELVPI*YLGRCR
Trigger: CCTGCATCTCCCCAAATAGCAAATCGGTACCAGCTC...TTTGAGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp ACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTGACACTTGTCTGGATTaGATACTGCACACAGGATCC +
Preference number: 4 (lower is better)
Translates to: TARQVSTLEAHRRLGKQTDTCLD*ILHTGS
Trigger: GGATCCTGTGTGCAGTATGCAATCCAGACAAGTGTC...AGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp CCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTCAAAGTGGGGAACTGTTTTTaGGTTTCTTTCCTGAGCCGC +
Preference number: 4 (lower is better)
Translates to: PGRFLPLRPTGGWENRLKVGNCF*VSFLSR
Trigger: GCGGCTCAGGAAAGAAACGCAAAAACAGTTCCCCAC...TTTGAGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp CTGGAAGGTTTCTGGTCTCCAGTTAAGGTGCCTAACTGCTGGAGAGTGACCTACCTCCCTGACTGGTCATaGCGGACGTTCACCGCATTT +
Preference number: 4 (lower is better)
Translates to: LEGFWSPVKVPNCWRVTYLPDWS*RTFTAF
Trigger: AAATGCGGTGAACGTCCGGCATGACCAGTCAGGGAG...GTAGGTCACTCTCCAGCAGTTAGGCACCTTAACTGGAGACCAGAAACCTTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp GCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTCAATTGCTACTGCAGGCTTaGATCATGATTTGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: ARQVSTLEAHRRLGKQTQLLLQA*IMIWVC
Trigger: GCAGACCCAAATCATGATGCAAGCCTGCAGTAGCAA...TTGAGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484332.1
CDS-3UTR GCA 90 bp GCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTCAAGCTTCATTGCACACTTaGTACTGCAGGCTTGCATCA +
Preference number: 4 (lower is better)
Translates to: ARQVSTLEAHRRLGKQTQASLHT*YCRLAS
Trigger: TGATGCAAGCCTGCAGTAGCAAGTGTGCAATGAAGC...TTGAGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484332.1
CDS-3UTR CCA 90 bp AATCTAAAGCCTAATTCCCTTCTTCAGAGGGTTGCTCGGGATGCAGCCCTGTGTATGGCAACACGCTCCTaGTCGCTTCGCGAACTCCTC +
Preference number: 4 (lower is better)
Translates to: NLKPNSLLQRVARDAALCMATRS*SLRELL
Trigger: GAGGAGTTCGCGAAGCGACCAGGAGCGTGTTGCCAT...ACACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAGGGAATTAGGCTTTAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295900.10
CDS-3UTR CCA 90 bp ATCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGAGGAAAATACTGAAGTaGGAGGAACGGCCAAAGGCG +
Preference number: 4 (lower is better)
Translates to: ILVKTTARQVSTLEAHRRRKILK*EERPKA
Trigger: CGCCTTTGGCCGTTCCTCCCACTTCAGTATTTTCCT...CCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp TCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTAGGAAAATACTGAAGTaGGAGGAACGGCCAAAGGCG +
Preference number: 4 (lower is better)
Translates to: SSLKQQPGRFLPLRPTGGRKILK*EERPKA
Trigger: CGCCTTTGGCCGTTCCTCCCACTTCAGTATTTTCCT...ACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp CTCACTGCTAGAGACATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCGGCAGGCAGGGGAGGGTGTaGAGATTCATGGACTGGAGG +
Preference number: 4 (lower is better)
Translates to: LTARDIASGKSSLKQQPGRQGRV*RFMDWR
Trigger: CCTCCAGTCCATGAATCTCCACACCCTCCCCTGCCT...GCCGGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATGTCTCTAGCAGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp CCCTTCTTCAGAGGGTTGCTCGGGATGCAGCCCTGTGTTCTCTGGAAGGTTTCTTTCCTGAGCCGCCACTaGTACTGCTACTGGCATTTT +
Preference number: 4 (lower is better)
Translates to: PFFRGLLGMQPCVLWKVSFLSRH*YCYWHF
Trigger: AAAATGCCAGTAGCAGTACCAGTGGCGGCTCAGGAA...AGAAACCTTCCAGAGAACACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp ACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTCTTTGGCAACCTTTGTaGGTTTGCTGCTGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: TARQVSTLEAHRRLGKQTLWQPL*VCCCCC
Trigger: ACAACAGCAGCAGCAAACCCACAAAGGTTGCCAAAG...AGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp TCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTGTCCAGAGTGCTGAGTaGAGGTGTAACTTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: SSLKQQPGRFLPLRPTGGVQSAE*RCNLSS
Trigger: TGAGGACAAGTTACACCTCCACTCAGCACTCTGGAC...ACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp TCAGCGCCTTGGAAATTTTACCCTGTGTTCGGCAACTTCGTGTGTTCTTCTAAGGCTCTCATCAGGCCCTaGCCAGGGCAACGATCAGCG +
Preference number: 4 (lower is better)
Translates to: SAPWKFYPVFGNFVCSSKALIRP*PGQRSA
Trigger: CGCTGATCGTTGCCCTGGCCAGGGCCTGATGAGAGC...CTTAGAAGAACACACGAAGTTGCCGAACACAGGGTAAAATTTCCAAGGCGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CCA 90 bp CCTTCTTCAGAGGGTTGCTCGGGATGCAGCCCTGTGTTCTCTGGAAGGTTTCTGAAAGAATGTACTGACTaGCTCTCATCAGGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: PSSEGCSGCSPVFSGRFLKECTD*LSSGPG
Trigger: GCCAGGGCCTGATGAGAGCCAGTCAGTACATTCTTT...CAGAAACCTTCCAGAGAACACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR TCA 90 bp AGTGGCATGAAGGGGAGTGCATACAAAAACACACAATGCCAGAAGTGCTTGAAGGGCAACGTTTCTCATTaGGCACCCCCGCCCCCACTT +
Preference number: 4 (lower is better)
Translates to: SGMKGSAYKNTQCQKCLKGNVSH*APPPPL
Trigger: AAGTGGGGGCGGGGGTGCTCAATGAGAAACGTTGCC...CTTCAAGCACTTCTGGCATTGTGTGTTTTTGTATGCACTCCCCTTCATGCCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000295900.10
CDS-3UTR TCA 90 bp TCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGATCTGGGTTCAAAATaGGACACGATCCTGGTGCTA +
Preference number: 4 (lower is better)
Translates to: SLKQQPGRFLPLRPTGGWDLGSK*DTILVL
Trigger: TAGCACCAGGATCGTGTCTCATTTTGAACCCAGATC...CCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295900.10
CDS-3UTR TCA 90 bp ACGATCAGCGCCTTGGAAATTTTACCCTGTGTTCGGCAACTTCGTGTGTTCTTCCCCGACAGAGCCCCATaGCTTCGCGGTTTTTCCCAA +
Preference number: 4 (lower is better)
Translates to: TISALEILPCVRQLRVFFPDRAP*LRGFSQ
Trigger: TTGGGAAAAACCGCGAAGTCATGGGGCTCTGTCGGG...GAAGAACACACGAAGTTGCCGAACACAGGGTAAAATTTCCAAGGCGCTGATCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR TCA 90 bp TCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTGAAATGCCTGCGGTTTaGCAACCTGATTACAGTCGT +
Preference number: 4 (lower is better)
Translates to: SSLKQQPGRFLPLRPTGGEMPAV*QPDYSR
Trigger: ACGACTGTAATCAGGTTGTCAAACCGCAGGCATTTC...ACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp CTCCCACCCTCCCCCGACCCAATTTGGCCTTCCTTTCTCAAAACTAGCTTGCATTCACAGAGGGTGTCATaGTTCTACCATGGGGAACTC +
Preference number: 4 (lower is better)
Translates to: LPPSPDPIWPSFLKTSLHSQRVS*FYHGEL
Trigger: GAGTTCCCCATGGTAGAATCATGACACCCTCTGTGA...ATGCAAGCTAGTTTTGAGAAAGGAAGGCCAAATTGGGTCGGGGGAGGGTGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR TCA 90 bp AGACACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACGGGATGCGGGTCCCTaGGAGGCTGCGGTGGTTGCT +
Preference number: 4 (lower is better)
Translates to: RHHEAEYLFTNQPTNPTKRDAGP*EAAVVA
Trigger: AGCAACCACCGCAGCCTCTCAGGGACCCGCATCCCG...TTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR TCA 90 bp CTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAAAAGCACTCCCACCTTGCTaGGCAGGGCAGCCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: LFTNQPTNPTKHISELTKALPPC*AGQPGG
Trigger: GCCTCCAGGCTGCCCTGCTCAGCAAGGTGGGAGTGC...TTTTGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR TCA 90 bp GTACTCACTGCTAGAGACATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCACGTGTGGAGATGGGTaGGGTGGTACTGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: VLTARDIASGKSSLKQQPTCGDG*GGTGHW
Trigger: CCAGTGCCCAGTACCACCTCACCCATCTCCACACGT...GGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATGTCTCTAGCAGTGAGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp GCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTCAATTTAGTGTGGTTCCATaGGCTGGTACCGATTTGCTA +
Preference number: 4 (lower is better)
Translates to: ARQVSTLEAHRRLGKQTQFSVVP*AGTDLL
Trigger: TAGCAAATCGGTACCAGCTCATGGAACCACACTAAA...TTGAGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp ACGATCAGCGCCTTGGAAATTTTACCCTGTGTTCGGCAACTTCGTGTGTTCTTCGGAAGATGTTACCGTTaGGGGGTAGGGAGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: TISALEILPCVRQLRVFFGRCYR*GVGRPR
Trigger: TCTGGGCCTCCCTACCCCTCAACGGTAACATCTTCC...GAAGAACACACGAAGTTGCCGAACACAGGGTAAAATTTCCAAGGCGCTGATCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR TCA 90 bp TTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAATATTCGTCACACAGTTaGGGCCGATGCTATGGGAAG +
Preference number: 4 (lower is better)
Translates to: LKQQPGRFLPLRPTGGWEYSSHS*GRCYGK
Trigger: CTTCCCATAGCATCGGCCTCAACTGTGTGACGAATA...TTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp CAGGCCCTGGCCAGGGCAACGATCAGCGCCTTGGAAATTTTACCCTGTGTTCGGATCCAAATAAACATCTaGAGTGGCATGAAGGGGAGT +
Preference number: 4 (lower is better)
Translates to: QALARATISALEILPCVRIQINI*SGMKGS
Trigger: ACTCCCCTTCATGCCACTTCAGATGTTTATTTGGAT...CCGAACACAGGGTAAAATTTCCAAGGCGCTGATCGTTGCCCTGGCCAGGGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR TCA 90 bp CTTCTTCAGAGGGTTGCTCGGGATGCAGCCCTGTGTTCTCTGGAAGGTTTCTGGGGATGGAAACCAGACTaGTTTCTCCCAACTATGCCA +
Preference number: 4 (lower is better)
Translates to: LLQRVARDAALCSLEGFWGWKPD*FLPTMP
Trigger: TGGCATAGTTGGGAGAAATCAGTCTGGTTTCCATCC...CCAGAAACCTTCCAGAGAACACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR TCA 90 bp TTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAACAACTAGGTACGTTCTaGTTCCCTCTCACCTCTCTC +
Preference number: 4 (lower is better)
Translates to: LKQQPGRFLPLRPTGGWEQLGTF*FPLTSL
Trigger: GAGAGAGGTGAGAGGGAATCAGAACGTACCTAGTTG...TTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR TCA 90 bp TTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAACCCACTTCATCTGTATaGATCCACTCCCGAGACACT +
Preference number: 4 (lower is better)
Translates to: LKQQPGRFLPLRPTGGWEPTSSV*IHSRDT
Trigger: AGTGTCTCGGGAGTGGATTCATACAGATGAAGTGGG...TTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR GCA 90 bp ACAAAAACTTCTCACAGATTGGTAGCAAGCAGTTCAGACCACTTTAACACTGATGACTGGGCAGAGGCCTaGGCTCCCCGACCGTCGCCA +
Preference number: 4 (lower is better)
Translates to: TKTSHRLVASSSDHFNTDDWAEA*APRPSP
Trigger: TGGCGACGGTCGGGGAGCGCAGGCCTCTGCCCAGTC...ATCAGTGTTAAAGTGGTCTGAACTGCTTGCTACCAATCTGTGAGAAGTTTTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp ATCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTGCTTCCACTTGCACTaGCTCCTTTGCTTTTGGACA +
Preference number: 4 (lower is better)
Translates to: ILVKTTARQVSTLEAHRRCFHLH*LLCFWT
Trigger: TGTCCAAAAGCAAAGGAGGCAGTGCAAGTGGAAGCA...CCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp CCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTCAAAACGGTTGCTTCCACTTaGACTGCCTCCTTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: PGRFLPLRPTGGWENRLKTVAST*TASFAF
Trigger: AAAAGCAAAGGAGGCAGTGCAAGTGGAAGCAACCGT...TTTGAGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp ATCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGACGGTTGCTTCCACTTaGACTGCCTCCTTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: ILVKTTARQVSTLEAHRRTVAST*TASFAF
Trigger: AAAAGCAAAGGAGGCAGTGCAAGTGGAAGCAACCGT...CCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp CCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTCAAAAGCTGTGCATTCAGATaGTTCTCCACCATGAGGTTG +
Preference number: 4 (lower is better)
Translates to: PGRFLPLRPTGGWENRLKSCAFR*FSTMRL
Trigger: CAACCTCATGGTGGAGAAGCATCTGAATGCACAGCT...TTTGAGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp AATCTAAAGCCTAATTCCCTTCTTCAGAGGGTTGCTCGGGATGCAGCCCTGTGTAGAGACGGTGGCTGCTaGCAGATAGCTGACTCCACA +
Preference number: 4 (lower is better)
Translates to: NLKPNSLLQRVARDAALCRDGGC*QIADST
Trigger: TGTGGAGTCAGCTATCTGGCAGCAGCCACCGTCTCT...ACACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAGGGAATTAGGCTTTAGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp CTCACTGCTAGAGACATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCGGCGTGCCCCTGGGATGGTaGCTGTGTGTTTCATGTGGA +
Preference number: 4 (lower is better)
Translates to: LTARDIASGKSSLKQQPGVPLGW*LCVSCG
Trigger: TCCACATGAAACACACAGGCACCATCCCAGGGGCAC...GCCGGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATGTCTCTAGCAGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp TTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAATGGCAACAGAACTCTTaGAGGAAGACAGCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: LKQQPGRFLPLRPTGGWEWQQNS*RKTAAL
Trigger: AAGGGCAGCTGTCTTCCTGCAAGAGTTCTGTTGCCA...TTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CCA 90 bp TCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTCTCTACTTTGCTGAATaGGATGCATTGGCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: SSLKQQPGRFLPLRPTGGLYFAE*DALAWC
Trigger: ACACCAGGCCAATGCATCCCATTCAGCAAAGTAGAG...ACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp GCTGAGTGGAGGTGTAACTTGTCCTCAAAAGTGTCCGCATTATTCCTCCCCGTGGTTTCTTTTCCAGAGTaGGCGGTGCAGGAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: AEWRCNLSSKVSALFLPVVSFPE*AVQEAL
Trigger: AAGGGCTTCCTGCACCGCCCACTCTGGAAAAGAAAC...CACGGGGAGGAATAATGCGGACACTTTTGAGGACAAGTTACACCTCCACTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp GCTGAGTGGAGGTGTAACTTGTCCTCAAAAGTGTCCGCATTATTCCTCCCCGTGTGGACAGCCCTGCGCTaGGTTAAGGAATGTGTCTTG +
Preference number: 4 (lower is better)
Translates to: AEWRCNLSSKVSALFLPVWTALR*VKECVL
Trigger: CAAGACACATTCCTTAACCCAGCGCAGGGCTGTCCA...CACGGGGAGGAATAATGCGGACACTTTTGAGGACAAGTTACACCTCCACTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp GTACTCACTGCTAGAGACATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCCTGGAGGAGGGTCAATaGGGGCACTCCCACCTTGCT +
Preference number: 4 (lower is better)
Translates to: VLTARDIASGKSSLKQQPLEEGQ*GHSHLA
Trigger: AGCAAGGTGGGAGTGCCCCCATTGACCCTCCTCCAG...GGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATGTCTCTAGCAGTGAGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp ACGATCAGCGCCTTGGAAATTTTACCCTGTGTTCGGCAACTTCGTGTGTTCTTCAGGCAGGGGAGGGTGTaGAGATTCATGGACTGGAGG +
Preference number: 4 (lower is better)
Translates to: TISALEILPCVRQLRVFFRQGRV*RFMDWR
Trigger: CCTCCAGTCCATGAATCTCCACACCCTCCCCTGCCT...GAAGAACACACGAAGTTGCCGAACACAGGGTAAAATTTCCAAGGCGCTGATCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CCA 90 bp TCCAGAGTGCTGAGTGGAGGTGTAACTTGTCCTCAAAAGTGTCCGCATTATTCCAGGCAGGGGAGGGTGTaGAGATTCATGGACTGGAGG +
Preference number: 4 (lower is better)
Translates to: SRVLSGGVTCPQKCPHYSRQGRV*RFMDWR
Trigger: CCTCCAGTCCATGAATCTCCACACCCTCCCCTGCCT...GGAATAATGCGGACACTTTTGAGGACAAGTTACACCTCCACTCAGCACTCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp CTGGAAGGTTTCTGGTCTCCAGTTAAGGTGCCTAACTGCTGGAGAGTGACCTACGGTGAGGAATACGTGTaGAGATGGGTGAGGTGGTAC +
Preference number: 4 (lower is better)
Translates to: LEGFWSPVKVPNCWRVTYGEEYV*RWVRWY
Trigger: GTACCACCTCACCCATCTCCACACGTATTCCTCACC...GTAGGTCACTCTCCAGCAGTTAGGCACCTTAACTGGAGACCAGAAACCTTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp CCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTCAAACTTTGGCAACCTTTGTaGGTTTGCTGCTGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: PGRFLPLRPTGGWENRLKLWQPL*VCCCCC
Trigger: ACAACAGCAGCAGCAAACCCACAAAGGTTGCCAAAG...TTTGAGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp CTGGAAGGTTTCTGGTCTCCAGTTAAGGTGCCTAACTGCTGGAGAGTGACCTACTCACGGCTGGCACTTTaGCAACCTTTGTGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: LEGFWSPVKVPNCWRVTYSRLAL*QPLWVC
Trigger: GCAAACCCACAAAGGTTGCCAAAGTGCCAGCCGTGA...GTAGGTCACTCTCCAGCAGTTAGGCACCTTAACTGGAGACCAGAAACCTTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp CCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTCAAATCCCCCGACCCAATTTaGCCTTCCTTTCTCAAAACT +
Preference number: 4 (lower is better)
Translates to: PGRFLPLRPTGGWENRLKSPDPI*PSFLKT
Trigger: AGTTTTGAGAAAGGAAGGCCAAATTGGGTCGGGGGA...TTTGAGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CCA 90 bp CTCACTGCTAGAGACATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCGGCCCAACTCCCTTTCCTTaGTGTCTGCTCTCGTCCCCA +
Preference number: 4 (lower is better)
Translates to: LTARDIASGKSSLKQQPGPTPFP*CLLSSP
Trigger: TGGGGACGAGAGCAGACACCAAGGAAAGGGAGTTGG...GCCGGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATGTCTCTAGCAGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR TCA 90 bp CATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGGTTGGCTTTGGTATTaGGGGGCAGTTAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: HSFREILVKTTARQVSTLGWLWY*GAVKAR
Trigger: CCTGGCCTTAACTGCCCCTCAATACCAAAGCCAACC...AAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp TTGGTAGCAAGCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGGCTGCGGTGGTTGCTaGGAGTCCGGATGGCGAATC +
Preference number: 4 (lower is better)
Translates to: LVASSSDHFNTDKSNSVAGCGGC*ESGWRI
Trigger: GATTCGCCATCCGGACTCTCAGCAACCACCGCAGCC...AGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGCTTGCTACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp TATCTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACATTGGTGCGGCTCCTGTaGCGTTCTAGGAGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: YLFTNQPTNPTKHISELTLVRLL*RSRRGG
Trigger: CCCGCCCCTCCTAGAACGTCACAGGAGCCGCACCAA...TGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR TCA 90 bp AGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCATTGGTGCGGCTCCTGTaGCGTTCTAGGAGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: SSDHFNTDKSNSVAELDPLVRLL*RSRRGG
Trigger: CCCGCCCCTCCTAGAACGTCACAGGAGCCGCACCAA...TGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp CTTCTTCAGAGGGTTGCTCGGGATGCAGCCCTGTGTTCTCTGGAAGGTTTCTGGAGCTACAAAAGGCTTTaGTTCGGAAGGAATCACTCC +
Preference number: 4 (lower is better)
Translates to: LLQRVARDAALCSLEGFWSYKRL*FGRNHS
Trigger: GGAGTGATTCCTTCCGAATCAAAGCCTTTTGTAGCT...CCAGAAACCTTCCAGAGAACACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp TCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTTTAGTGTGGTTCCATaGGCTGGTACCGATTTGCTA +
Preference number: 4 (lower is better)
Translates to: SSLKQQPGRFLPLRPTGGFSVVP*AGTDLL
Trigger: TAGCAAATCGGTACCAGCTCATGGAACCACACTAAA...ACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp CCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTCAAAACATCTGAAGTGGCATaGAGGGGAGTGCATACAAAA +
Preference number: 4 (lower is better)
Translates to: PGRFLPLRPTGGWENRLKTSEVA*RGVHTK
Trigger: TTTTGTATGCACTCCCCTTCATGCCACTTCAGATGT...TTTGAGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR TCA 90 bp CTCACTGCTAGAGACATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCGGCTGCAGGCTTGCATCATaGTTTGGGTCTGCCCACCAA +
Preference number: 4 (lower is better)
Translates to: LTARDIASGKSSLKQQPGCRLAS*FGSAHQ
Trigger: TTGGTGGGCAGACCCAAATCATGATGCAAGCCTGCA...GCCGGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATGTCTCTAGCAGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484332.1
CDS-3UTR GCA 90 bp TCCAGAGTGCTGAGTGGAGGTGTAACTTGTCCTCAAAAGTGTCCGCATTATTCCTTCCAGAGTGGGCGGTaGAGGAAGCCCTTTGCCATT +
Preference number: 4 (lower is better)
Translates to: SRVLSGGVTCPQKCPHYSFQSGR*RKPFAI
Trigger: AATGGCAAAGGGCTTCCTGCACCGCCCACTCTGGAA...GGAATAATGCGGACACTTTTGAGGACAAGTTACACCTCCACTCAGCACTCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp TCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTTAAGGAATGTGTCTTaGATGTCAAAGACCGGGTGC +
Preference number: 4 (lower is better)
Translates to: SSLKQQPGRFLPLRPTGGLRNVS*MSKTGC
Trigger: GCACCCGGTCTTTGACATGCAAGACACATTCCTTAA...ACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp TCCAGAGTGCTGAGTGGAGGTGTAACTTGTCCTCAAAAGTGTCCGCATTATTCCTGTAGAGACGGTGGCTaGTGCCAGATAGCTGACTCC +
Preference number: 4 (lower is better)
Translates to: SRVLSGGVTCPQKCPHYSCRDGG*CQIADS
Trigger: GGAGTCAGCTATCTGGCAGCAGCCACCGTCTCTACA...GGAATAATGCGGACACTTTTGAGGACAAGTTACACCTCCACTCAGCACTCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp CATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTTGTAGAGACGGTGGCTaGTGCCAGATAGCTGACTCC +
Preference number: 4 (lower is better)
Translates to: HSFREILVKTTARQVSTLCRDGG*CQIADS
Trigger: GGAGTCAGCTATCTGGCAGCAGCCACCGTCTCTACA...AAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp ACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTGACGTTCACCGCATTTaGTTTATTCGTCACACAGTT +
Preference number: 4 (lower is better)
Translates to: TARQVSTLEAHRRLGKQTDVHRI*FIRHTV
Trigger: AACTGTGTGACGAATAAAGCAAATGCGGTGAACGTC...AGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp TCCAGAGTGCTGAGTGGAGGTGTAACTTGTCCTCAAAAGTGTCCGCATTATTCCCTCCCTGACTGGTCATaGCGGACGTTCACCGCATTT +
Preference number: 4 (lower is better)
Translates to: SRVLSGGVTCPQKCPHYSLPDWS*RTFTAF
Trigger: AAATGCGGTGAACGTCCGGCATGACCAGTCAGGGAG...GGAATAATGCGGACACTTTTGAGGACAAGTTACACCTCCACTCAGCACTCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp TCCAGAGTGCTGAGTGGAGGTGTAACTTGTCCTCAAAAGTGTCCGCATTATTCCGTTCATCAGTCCTTGTaGCCCTGGGATGGTGCCTGT +
Preference number: 4 (lower is better)
Translates to: SRVLSGGVTCPQKCPHYSVHQSL*PWDGAC
Trigger: ACAGGCACCATCCCAGGGGCACAAGGACTGATGAAC...GGAATAATGCGGACACTTTTGAGGACAAGTTACACCTCCACTCAGCACTCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp CATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGTTCATCAGTCCTTGTaGCCCTGGGATGGTGCCTGT +
Preference number: 4 (lower is better)
Translates to: HSFREILVKTTARQVSTLVHQSL*PWDGAC
Trigger: ACAGGCACCATCCCAGGGGCACAAGGACTGATGAAC...AAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp CATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTCAGCTGTCAGGGACGTaGCTTTGGCTGATGAAGGAG +
Preference number: 4 (lower is better)
Translates to: HSFREILVKTTARQVSTLQLSGT*LWLMKE
Trigger: CTCCTTCATCAGCCAAAGGCACGTCCCTGACAGCTG...AAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp TTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAGTTAAGGTGCCTAACTaGTGGAGAGTGACCTACAGA +
Preference number: 4 (lower is better)
Translates to: LKQQPGRFLPLRPTGGWEVKVPN*WRVTYR
Trigger: TCTGTAGGTCACTCTCCAGCAGTTAGGCACCTTAAC...TTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp CTCCCACCCTCCCCCGACCCAATTTGGCCTTCCTTTCTCAAAACTAGCTTGCATGTTAAGGTGCCTAACTaGTGGAGAGTGACCTACAGA +
Preference number: 4 (lower is better)
Translates to: LPPSPDPIWPSFLKTSLHVKVPN*WRVTYR
Trigger: TCTGTAGGTCACTCTCCAGCAGTTAGGCACCTTAAC...ATGCAAGCTAGTTTTGAGAAAGGAAGGCCAAATTGGGTCGGGGGAGGGTGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR GCA 90 bp TCAGCGCCTTGGAAATTTTACCCTGTGTTCGGCAACTTCGTGTGTTCTTCTAAGCCTTCTTCAGAGGGTTaGTCGGGATGCAGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: SAPWKFYPVFGNFVCSSKPSSEG*SGCSPV
Trigger: CACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAGG...CTTAGAAGAACACACGAAGTTGCCGAACACAGGGTAAAATTTCCAAGGCGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR GCA 90 bp ACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTTGGCATGAAGGGGAGTaGATACAAAAACACACAATG +
Preference number: 4 (lower is better)
Translates to: TARQVSTLEAHRRLGKQTWHEGE*IQKHTM
Trigger: CATTGTGTGTTTTTGTATGCACTCCCCTTCATGCCA...AGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR GCA 90 bp GCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTCAACACCAACTCCAAATATaGTCCATGTTTGGGCTTATG +
Preference number: 4 (lower is better)
Translates to: ARQVSTLEAHRRLGKQTQHQLQI*SMFGLM
Trigger: CATAAGCCCAAACATGGAGCATATTTGGAGTTGGTG...TTGAGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484332.1
CDS-3UTR CCA 90 bp TCAGCGCCTTGGAAATTTTACCCTGTGTTCGGCAACTTCGTGTGTTCTTCTAAGATCCCGACTCTGTGGTaGAATTGGGTGCCGGGTGAG +
Preference number: 4 (lower is better)
Translates to: SAPWKFYPVFGNFVCSSKIPTLW*NWVPGE
Trigger: CTCACCCGGCACCCAATTCCACCACAGAGTCGGGAT...CTTAGAAGAACACACGAAGTTGCCGAACACAGGGTAAAATTTCCAAGGCGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295900.10
CDS-3UTR CCA 90 bp CTCCCACCCTCCCCCGACCCAATTTGGCCTTCCTTTCTCAAAACTAGCTTGCATTCAAATCAGCTGCACTaGTGCCTGTTTCCTCATCCA +
Preference number: 4 (lower is better)
Translates to: LPPSPDPIWPSFLKTSLHSNQLH*CLFPHP
Trigger: TGGATGAGGAAACAGGCACCAGTGCAGCTGATTTGA...ATGCAAGCTAGTTTTGAGAAAGGAAGGCCAAATTGGGTCGGGGGAGGGTGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295900.10
CDS-3UTR CCA 90 bp CATTGCTATCAAAATCTAAAGCCTAATTCCCTTCTTCAGAGGGTTGCTCGGGATGCATCACTTCAGGACTaGGCAGAGGCCTGCGCTCCC +
Preference number: 4 (lower is better)
Translates to: HCYQNLKPNSLLQRVARDASLQD*AEACAP
Trigger: GGGAGCGCAGGCCTCTGCCCAGTCCTGAAGTGATGC...ATCCCGAGCAACCCTCTGAAGAAGGGAATTAGGCTTTAGATTTTGATAGCAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp GCTGAGTGGAGGTGTAACTTGTCCTCAAAAGTGTCCGCATTATTCCTCCCCGTGAGGAAAATACTGAAGTaGGAGGAACGGCCAAAGGCG +
Preference number: 4 (lower is better)
Translates to: AEWRCNLSSKVSALFLPVRKILK*EERPKA
Trigger: CGCCTTTGGCCGTTCCTCCCACTTCAGTATTTTCCT...CACGGGGAGGAATAATGCGGACACTTTTGAGGACAAGTTACACCTCCACTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp AATCTAAAGCCTAATTCCCTTCTTCAGAGGGTTGCTCGGGATGCAGCCCTGTGTGTTTCTTTTCCAGAGTaGGCGGTGCAGGAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: NLKPNSLLQRVARDAALCVSFPE*AVQEAL
Trigger: AAGGGCTTCCTGCACCGCCCACTCTGGAAAAGAAAC...ACACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAGGGAATTAGGCTTTAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp TCCAGAGTGCTGAGTGGAGGTGTAACTTGTCCTCAAAAGTGTCCGCATTATTCCCGTTTTCTTCTACCCTaGACAGCCCTGCGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: SRVLSGGVTCPQKCPHYSRFLLP*TALRWV
Trigger: AACCCAGCGCAGGGCTGTCCAGGGTAGAAGAAAACG...GGAATAATGCGGACACTTTTGAGGACAAGTTACACCTCCACTCAGCACTCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp GCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCGCAGCCTGGAGGCCTTaGAAGACTGGGGGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: AVQTTLTLIKAIRWLNLIAAWRP*KTGGVR
Trigger: CCTCACACCCCCAGTCTTCCAAGGCCTCCAGGCTGC...GATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp GAAAGGAGGGTGTGTGTCAGGGCAATCCTATACATGCATCACAAAAGACCTTCAAGGCAGGGGAGGGTGTaGAGATTCATGGACTGGAGG +
Preference number: 4 (lower is better)
Translates to: ERRVCVRAILYMHHKRPSRQGRV*RFMDWR
Trigger: CCTCCAGTCCATGAATCTCCACACCCTCCCCTGCCT...TGAAGGTCTTTTGTGATGCATGTATAGGATTGCCCTGACACACACCCTCCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CCA 90 bp GCTGAGTGGAGGTGTAACTTGTCCTCAAAAGTGTCCGCATTATTCCTCCCCGTGGCTGTGCATTTAGTGTaGTTCCATGAGCTGGTACCG +
Preference number: 4 (lower is better)
Translates to: AEWRCNLSSKVSALFLPVAVHLV*FHELVP
Trigger: CGGTACCAGCTCATGGAACCACACTAAATGCACAGC...CACGGGGAGGAATAATGCGGACACTTTTGAGGACAAGTTACACCTCCACTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp CCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTCAAAAAGAGGACACTTGTCTaGATTGCATACTGCACACAG +
Preference number: 4 (lower is better)
Translates to: PGRFLPLRPTGGWENRLKKRTLV*IAYCTQ
Trigger: CTGTGTGCAGTATGCAATCCAGACAAGTGTCCTCTT...TTTGAGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp CATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTAAAGGCCAGAGGGCGTaGAAGGGGATGAGGATGAAG +
Preference number: 4 (lower is better)
Translates to: HSFREILVKTTARQVSTLKGQRA*KGMRMK
Trigger: CTTCATCCTCATCCCCTTCCACGCCCTCTGGCCTTT...AAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp TTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAATTGAGGCCGATGCTATaGGAAGATGTTACCGTTGAG +
Preference number: 4 (lower is better)
Translates to: LKQQPGRFLPLRPTGGWELRPML*EDVTVE
Trigger: CTCAACGGTAACATCTTCCCATAGCATCGGCCTCAA...TTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp GCTGAGTGGAGGTGTAACTTGTCCTCAAAAGTGTCCGCATTATTCCTCCCCGTGTGGGAAAAACTGCCGTaGGAGTTGACAGGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: AEWRCNLSSKVSALFLPVWEKLP*ELTGSS
Trigger: TGAACTGCCTGTCAACTCCCACGGCAGTTTTTCCCA...CACGGGGAGGAATAATGCGGACACTTTTGAGGACAAGTTACACCTCCACTCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp TCCAGAGTGCTGAGTGGAGGTGTAACTTGTCCTCAAAAGTGTCCGCATTATTCCCAGTCCTTGTGCCCCTaGGATGGTGCCTGTGTGTTT +
Preference number: 4 (lower is better)
Translates to: SRVLSGGVTCPQKCPHYSQSLCP*DGACVF
Trigger: AAACACACAGGCACCATCCCAGGGGCACAAGGACTG...GGAATAATGCGGACACTTTTGAGGACAAGTTACACCTCCACTCAGCACTCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp AATCTAAAGCCTAATTCCCTTCTTCAGAGGGTTGCTCGGGATGCAGCCCTGTGTCAGCCCTGTGTTCTCTaGAAGGTTTCTGGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: NLKPNSLLQRVARDAALCQPCVL*KVSGLQ
Trigger: CTGGAGACCAGAAACCTTCCAGAGAACACAGGGCTG...ACACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAGGGAATTAGGCTTTAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp CCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTCAAACAACGATCAGCGCCTTaGAAATTTTACCCTGTGTTC +
Preference number: 4 (lower is better)
Translates to: PGRFLPLRPTGGWENRLKQRSAP*KFYPVF
Trigger: GAACACAGGGTAAAATTTCCAAGGCGCTGATCGTTG...TTTGAGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CCA 90 bp CTATCCCTTGACATTTGTTCATGTTCTATACAGCAGCCAACACAAAGTCCAGCTGCTCTCATCAGGCCCTaGCCAGGGCAACGATCAGCG +
Preference number: 4 (lower is better)
Translates to: LSLDICSCSIQQPTQSPAALIRP*PGQRSA
Trigger: CGCTGATCGTTGCCCTGGCCAGGGCCTGATGAGAGC...AGCTGGACTTTGTGTTGGCTGCTGTATAGAACATGAACAAATGTCAAGGGATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CCA 90 bp TCCAGAGTGCTGAGTGGAGGTGTAACTTGTCCTCAAAAGTGTCCGCATTATTCCCCAACTATGCCAAACTaGCCCATCCATGCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: SRVLSGGVTCPQKCPHYSPTMPN*PIHALS
Trigger: GGAGAGGGCATGGATGGGCCAGTTTGGCATAGTTGG...GGAATAATGCGGACACTTTTGAGGACAAGTTACACCTCCACTCAGCACTCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CCA 90 bp GCTGAGTGGAGGTGTAACTTGTCCTCAAAAGTGTCCGCATTATTCCTCCCCGTGATGTCTTCTTTCCAGTaGAGCTTTCAGCTCCTGCGC +
Preference number: 4 (lower is better)
Translates to: AEWRCNLSSKVSALFLPVMSSFQ*SFQLLR
Trigger: GCGCAGGAGCTGAAAGCTCCACTGGAAAGAAGACAT...CACGGGGAGGAATAATGCGGACACTTTTGAGGACAAGTTACACCTCCACTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484332.1
3UTR CAA 72 bp TCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTaGAGGCCCACAGGAGGTTGGGAAAACAGACTCAAA +
Preference number: 4 (lower is better)
Translates to: SSLKQQPGRFLP*RPTGGWENRLK
Trigger: TTTGAGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp GACACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACGAATTGGGTGCCGGGTaGGGACGATGGCAACACGCT +
Preference number: 4 (lower is better)
Translates to: DTMKLNICLQTNQPTQPNELGAG*GRWQHA
Trigger: AGCGTGTTGCCATCGTCCTCACCCGGCACCCAATTC...GTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR TCA 90 bp TATCTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAGGCTGCGGTGGTTGCTaGGAGTCCGGATGGCGAATC +
Preference number: 4 (lower is better)
Translates to: YLFTNQPTNPTKHISELTGCGGC*ESGWRI
Trigger: GATTCGCCATCCGGACTCTCAGCAACCACCGCAGCC...TGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR TCA 90 bp TCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTCTGAGGATGATGACCTaGATAATGACAGTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: SSLKQQPGRFLPLRPTGGLRMMT*IMTVQF
Trigger: AAACTGGACTGTCATTATTCAGGTCATCATCCTCAG...ACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp ATCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGCTGAGGATGATGACCTaGATAATGACAGTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: ILVKTTARQVSTLEAHRRLRMMT*IMTVQF
Trigger: AAACTGGACTGTCATTATTCAGGTCATCATCCTCAG...CCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp CATTGCTATCAAAATCTAAAGCCTAATTCCCTTCTTCAGAGGGTTGCTCGGGATACGTGTGGAGATGGGTaGGGTGGTACTGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: HCYQNLKPNSLLQRVARDTCGDG*GGTGHW
Trigger: CCAGTGCCCAGTACCACCTCACCCATCTCCACACGT...ATCCCGAGCAACCCTCTGAAGAAGGGAATTAGGCTTTAGATTTTGATAGCAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp GCTGAGTGGAGGTGTAACTTGTCCTCAAAAGTGTCCGCATTATTCCTCCCCGTGCTGGATTTCAATTTCTaGGGTTTCCTGGACATGGGG +
Preference number: 4 (lower is better)
Translates to: AEWRCNLSSKVSALFLPVLDFNF*GFLDMG
Trigger: CCCCATGTCCAGGAAACCTCAGAAATTGAAATCCAG...CACGGGGAGGAATAATGCGGACACTTTTGAGGACAAGTTACACCTCCACTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp TTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAACTGCTACTGGCATTTTaGCAGTTAGTGCTGTTACCA +
Preference number: 4 (lower is better)
Translates to: LKQQPGRFLPLRPTGGWELLLAF*QLVLLP
Trigger: TGGTAACAGCACTAACTGTCAAAATGCCAGTAGCAG...TTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp CTCACTGCTAGAGACATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCGGCTATTCGTCACACAGTTaGGGCCGATGCTATGGGAAG +
Preference number: 4 (lower is better)
Translates to: LTARDIASGKSSLKQQPGYSSHS*GRCYGK
Trigger: CTTCCCATAGCATCGGCCTCAACTGTGTGACGAATA...GCCGGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATGTCTCTAGCAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp GCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTCAAACTGTAAAAAGCACTTaGATTACAAAGGTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: ARQVSTLEAHRRLGKQTQTVKST*ITKVLA
Trigger: TGCCAGGACCTTTGTAATTCAAGTGCTTTTTACAGT...TTGAGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484332.1
CDS-3UTR GCA 90 bp GCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTCAACAGATTTCAGTAGTGTaGCATCCATTTTCGGATGAA +
Preference number: 4 (lower is better)
Translates to: ARQVSTLEAHRRLGKQTQQISVV*HPFSDE
Trigger: TTCATCCGAAAATGGATGGCACACTACTGAAATCTG...TTGAGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp CTCACTGCTAGAGACATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCGGCGTGCAGGAAGCCCTTTaGCATTCAGAATCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: LTARDIASGKSSLKQQPGVQEAL*HSESVQ
Trigger: CTGGACAGATTCTGAATGGCAAAGGGCTTCCTGCAC...GCCGGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATGTCTCTAGCAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp TCCAGAGTGCTGAGTGGAGGTGTAACTTGTCCTCAAAAGTGTCCGCATTATTCCATGTCAAAGACCGGGTaGAGGGCTTCTTGGTGTCGA +
Preference number: 4 (lower is better)
Translates to: SRVLSGGVTCPQKCPHYSMSKTG*RASWCR
Trigger: TCGACACCAAGAAGCCCTGCACCCGGTCTTTGACAT...GGAATAATGCGGACACTTTTGAGGACAAGTTACACCTCCACTCAGCACTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp GCTGAGTGGAGGTGTAACTTGTCCTCAAAAGTGTCCGCATTATTCCTCCCCGTGGACACTTGTCTGGATTaGATACTGCACACAGGATCC +
Preference number: 4 (lower is better)
Translates to: AEWRCNLSSKVSALFLPVDTCLD*ILHTGS
Trigger: GGATCCTGTGTGCAGTATGCAATCCAGACAAGTGTC...CACGGGGAGGAATAATGCGGACACTTTTGAGGACAAGTTACACCTCCACTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp CTCACTGCTAGAGACATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCGGCAGCCGCCACTGGTACTaGTACTGGCATTTTGACAGT +
Preference number: 4 (lower is better)
Translates to: LTARDIASGKSSLKQQPGSRHWY*YWHFDS
Trigger: ACTGTCAAAATGCCAGTAGCAGTACCAGTGGCGGCT...GCCGGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATGTCTCTAGCAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp CAGGCCCTGGCCAGGGCAACGATCAGCGCCTTGGAAATTTTACCCTGTGTTCGGACAACCAACCCAATCTaGCATACTGTTTACTATGAA +
Preference number: 4 (lower is better)
Translates to: QALARATISALEILPCVRTTNPI*HTVYYE
Trigger: TTCATAGTAAACAGTATGGCAGATTGGGTTGGTTGT...CCGAACACAGGGTAAAATTTCCAAGGCGCTGATCGTTGCCCTGGCCAGGGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR GCA 90 bp CTTCTTCAGAGGGTTGCTCGGGATGCAGCCCTGTGTTCTCTGGAAGGTTTCTGGTGGCATGAAGGGGAGTaGATACAAAAACACACAATG +
Preference number: 4 (lower is better)
Translates to: LLQRVARDAALCSLEGFWWHEGE*IQKHTM
Trigger: CATTGTGTGTTTTTGTATGCACTCCCCTTCATGCCA...CCAGAAACCTTCCAGAGAACACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR GCA 90 bp CCCTTCTTCAGAGGGTTGCTCGGGATGCAGCCCTGTGTTCTCTGGAAGGTTTCTGGGCAATCCTATACATaGATCACAAAAGACCTTCAG +
Preference number: 4 (lower is better)
Translates to: PFFRGLLGMQPCVLWKVSGQSYT*ITKDLQ
Trigger: CTGAAGGTCTTTTGTGATGCATGTATAGGATTGCCC...AGAAACCTTCCAGAGAACACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR GCA 90 bp CCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTCAAAACCAGGAAGAAGCAATaGCCACTTCATCTGTATGAA +
Preference number: 4 (lower is better)
Translates to: PGRFLPLRPTGGWENRLKTRKKQ*PLHLYE
Trigger: TTCATACAGATGAAGTGGGCATTGCTTCTTCCTGGT...TTTGAGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR GCA 90 bp TTGGTAGCAAGCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTCCTGCGCAGAAGGGCTaGTTTGGAGAGGCGTCTTGC +
Preference number: 4 (lower is better)
Translates to: LVASSSDHFNTDKSNSVAPAQKG*FGEASC
Trigger: GCAAGACGCCTCTCCAAAGCAGCCCTTCTGCGCAGG...AGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGCTTGCTACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484332.1
CDS-3UTR CCA 90 bp GAAAGGAGGGTGTGTGTCAGGGCAATCCTATACATGCATCACAAAAGACCTTCAACTCTGTGGTGGAATTaGGTGCCGGGTGAGGACGAT +
Preference number: 4 (lower is better)
Translates to: ERRVCVRAILYMHHKRPSTLWWN*VPGEDD
Trigger: ATCGTCCTCACCCGGCACCCAATTCCACCACAGAGT...TGAAGGTCTTTTGTGATGCATGTATAGGATTGCCCTGACACACACCCTCCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295900.10
CDS-3UTR CCA 90 bp GAAAGGAGGGTGTGTGTCAGGGCAATCCTATACATGCATCACAAAAGACCTTCAGAAATCCCGACTCTGTaGTGGAATTGGGTGCCGGGT +
Preference number: 4 (lower is better)
Translates to: ERRVCVRAILYMHHKRPSEIPTL*WNWVPG
Trigger: ACCCGGCACCCAATTCCACCACAGAGTCGGGATTTC...TGAAGGTCTTTTGTGATGCATGTATAGGATTGCCCTGACACACACCCTCCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295900.10
CDS-3UTR CCA 90 bp CTGGAAGGTTTCTGGTCTCCAGTTAAGGTGCCTAACTGCTGGAGAGTGACCTACTCGTATCTATCCCACTaGAGGTCAAATCAGCTGCAC +
Preference number: 4 (lower is better)
Translates to: LEGFWSPVKVPNCWRVTYSYLSH*RSNQLH
Trigger: GTGCAGCTGATTTGACCTCCAGTGGGATAGATACGA...GTAGGTCACTCTCCAGCAGTTAGGCACCTTAACTGGAGACCAGAAACCTTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295900.10
CDS-3UTR CCA 90 bp AGACACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAAGCATCACTTCAGGACTaGGCAGAGGCCTGCGCTCCC +
Preference number: 4 (lower is better)
Translates to: RHHEAEYLFTNQPTNPTKASLQD*AEACAP
Trigger: GGGAGCGCAGGCCTCTGCCCAGTCCTGAAGTGATGC...TTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CCA 90 bp ATCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGGTGATTTCAACAACTTaGAACTTGATGAGGATGCGC +
Preference number: 4 (lower is better)
Translates to: ILVKTTARQVSTLEAHRRVISTT*NLMRMR
Trigger: GCGCATCCTCATCAAGTTCCAAGTTGTTGAAATCAC...CCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp CTGGAAGGTTTCTGGTCTCCAGTTAAGGTGCCTAACTGCTGGAGAGTGACCTACCTCTACTTTGCTGAATaGGATGCATTGGCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: LEGFWSPVKVPNCWRVTYLYFAE*DALAWC
Trigger: ACACCAGGCCAATGCATCCCATTCAGCAAAGTAGAG...GTAGGTCACTCTCCAGCAGTTAGGCACCTTAACTGGAGACCAGAAACCTTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp TCCAGAGTGCTGAGTGGAGGTGTAACTTGTCCTCAAAAGTGTCCGCATTATTCCGTTTCTTTTCCAGAGTaGGCGGTGCAGGAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: SRVLSGGVTCPQKCPHYSVSFPE*AVQEAL
Trigger: AAGGGCTTCCTGCACCGCCCACTCTGGAAAAGAAAC...GGAATAATGCGGACACTTTTGAGGACAAGTTACACCTCCACTCAGCACTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp CCTTCTTCAGAGGGTTGCTCGGGATGCAGCCCTGTGTTCTCTGGAAGGTTTCTGTCAATAACCCCACAGTaGATGTCAGGATCAAACTCT +
Preference number: 4 (lower is better)
Translates to: PSSEGCSGCSPVFSGRFLSITPQ*MSGSNS
Trigger: AGAGTTTGATCCTGACATCCACTGTGGGGTTATTGA...CAGAAACCTTCCAGAGAACACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp GTACTCACTGCTAGAGACATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCCGTTTTCTTCTACCCTaGACAGCCCTGCGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: VLTARDIASGKSSLKQQPRFLLP*TALRWV
Trigger: AACCCAGCGCAGGGCTGTCCAGGGTAGAAGAAAACG...GGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATGTCTCTAGCAGTGAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp ACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACACAGCAGCCTGGAGGCCTTaGAAGACTGGGGGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: TMKLNICLQTNQPTQPNTAAWRP*KTGGVR
Trigger: CCTCACACCCCCAGTCTTCCAAGGCCTCCAGGCTGC...TGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CCA 90 bp GACACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACCTGGAGGAGGGTCAATaGGGGCACTCCCACCTTGCT +
Preference number: 4 (lower is better)
Translates to: DTMKLNICLQTNQPTQPNLEEGQ*GHSHLA
Trigger: AGCAAGGTGGGAGTGCCCCCATTGACCCTCCTCCAG...GTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CCA 90 bp TTGGTAGCAAGCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTCTGGAGGAGGGTCAATaGGGGCACTCCCACCTTGCT +
Preference number: 4 (lower is better)
Translates to: LVASSSDHFNTDKSNSVALEEGQ*GHSHLA
Trigger: AGCAAGGTGGGAGTGCCCCCATTGACCCTCCTCCAG...AGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGCTTGCTACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp AGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGAGAAGCTGGCTCAGTaGCAGGCAGGGGAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: SSDHFNTDKSNSVAELDPEKLAQ*QAGEGV
Trigger: CACACCCTCCCCTGCCTGCCACTGAGCCAGCTTCTC...TGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp GTACTCACTGCTAGAGACATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCCTTCGCCCTCCTCACTaGATAACCGAGAAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: VLTARDIASGKSSLKQQPLRPPH*ITEKLA
Trigger: AGCCAGCTTCTCGGTTATCCAGTGAGGAGGGCGAAG...GGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATGTCTCTAGCAGTGAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp AATCTAAAGCCTAATTCCCTTCTTCAGAGGGTTGCTCGGGATGCAGCCCTGTGTGCTGTGCATTTAGTGTaGTTCCATGAGCTGGTACCG +
Preference number: 4 (lower is better)
Translates to: NLKPNSLLQRVARDAALCAVHLV*FHELVP
Trigger: CGGTACCAGCTCATGGAACCACACTAAATGCACAGC...ACACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAGGGAATTAGGCTTTAGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp ATCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGAGAGTGAACCAACAGTaGGGAACTGTTTTTGCGTTT +
Preference number: 4 (lower is better)
Translates to: ILVKTTARQVSTLEAHRRRVNQQ*GTVFAF
Trigger: AAACGCAAAAACAGTTCCCCACTGTTGGTTCACTCT...CCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp CTGGAAGGTTTCTGGTCTCCAGTTAAGGTGCCTAACTGCTGGAGAGTGACCTACTTGAGGCCGATGCTATaGGAAGATGTTACCGTTGAG +
Preference number: 4 (lower is better)
Translates to: LEGFWSPVKVPNCWRVTYLRPML*EDVTVE
Trigger: CTCAACGGTAACATCTTCCCATAGCATCGGCCTCAA...GTAGGTCACTCTCCAGCAGTTAGGCACCTTAACTGGAGACCAGAAACCTTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp CATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACACATTGGGCCCCTCCCTGACTaGTCATGCCGGACGTTCACC +
Preference number: 4 (lower is better)
Translates to: HEAEYLFTNQPTNPTKHIGPLPD*SCRTFT
Trigger: GGTGAACGTCCGGCATGACCAGTCAGGGAGGGGCCC...AATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CCA 90 bp GCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTCAAATAAAAGCAATTCGGTaGCTGAACTTGATCCAGTGT +
Preference number: 4 (lower is better)
Translates to: ARQVSTLEAHRRLGKQTQIKAIR*LNLIQC
Trigger: ACACTGGATCAAGTTCAGCCACCGAATTGCTTTTAT...TTGAGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp TCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGTGGGCTATTTTGTCATaGTGTCTTGGGCTAACATCT +
Preference number: 4 (lower is better)
Translates to: SLKQQPGRFLPLRPTGGWWAILS*CLGLTS
Trigger: AGATGTTAGCCCAAGACACCATGACAAAATAGCCCA...CCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp CCTTCTTCAGAGGGTTGCTCGGGATGCAGCCCTGTGTTCTCTGGAAGGTTTCTGTGGGCTATTTTGTCATaGTGTCTTGGGCTAACATCT +
Preference number: 4 (lower is better)
Translates to: PSSEGCSGCSPVFSGRFLWAILS*CLGLTS
Trigger: AGATGTTAGCCCAAGACACCATGACAAAATAGCCCA...CAGAAACCTTCCAGAGAACACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp TCAAAAGGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATGTCAAGCCCCCGGACTaGAGCCAGGGCGAAGTCGGA +
Preference number: 4 (lower is better)
Translates to: SKGWAILSWCLGLTSIFHVKPPD*SQGEVG
Trigger: TCCGACTTCGCCCTGGCTCCAGTCCGGGGGCTTGAC...ATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCTTTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000487717.5
3UTR CAA 72 bp CAGGTCAGGACTTACATTCTCTCCAACTCCCTTTCCTaGGTGTCTGCTCTCGTCCCCAACCACATCCAAATA +
Preference number: 4 (lower is better)
Translates to: QVRTYILSNSLS*VSALVPNHIQI
Trigger: TATTTGGATGTGGTTGGGGACGAGAGCAGACACCAAGGAAAGGGAGTTGGAGAGAATGTAAGTCCTGACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR TCA 90 bp TATCTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAGGCAACGTTTCTCATTaGGCACCCCCGCCCCCACTT +
Preference number: 4 (lower is better)
Translates to: YLFTNQPTNPTKHISELTGNVSH*APPPPL
Trigger: AAGTGGGGGCGGGGGTGCTCAATGAGAAACGTTGCC...TGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR TCA 90 bp GTAGCAAGCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACCCGACAGAGCCCCATaGCTTCGCGGTTTTTCCCAA +
Preference number: 4 (lower is better)
Translates to: VASSSDHFNTDKSNSVAEPDRAP*LRGFSQ
Trigger: TTGGGAAAAACCGCGAAGTCATGGGGCTCTGTCGGG...TTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGCTTGCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp CCAAAACATTCTTTTGCCCAGCCAATCTACTTGAAGAGTGGCTCTGTGATATACCCCGACAGAGCCCCATaGCTTCGCGGTTTTTCCCAA +
Preference number: 4 (lower is better)
Translates to: PKHSFAQPIYLKSGSVIYPDRAP*LRGFSQ
Trigger: TTGGGAAAAACCGCGAAGTCATGGGGCTCTGTCGGG...GTATATCACAGAGCCACTCTTCAAGTAGATTGGCTGGGCAAAAGAATGTTTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp GACACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACGCCTGGTGTTCCCCCTaGGCTGCAGTTTCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: DTMKLNICLQTNQPTQPNAWCSP*AAVSLW
Trigger: CCAAAGAGAAACTGCAGCTCAGGGGGAACACCAGGC...GTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR TCA 90 bp TCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTCCATCCATTTTCGGATaGATCTTTTCCACTTTCACA +
Preference number: 4 (lower is better)
Translates to: SSLKQQPGRFLPLRPTGGPSIFG*IFSTFT
Trigger: TGTGAAAGTGGAAAAGATTCATCCGAAAATGGATGG...ACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp AAAAGGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCGGCTGCGGTGGTTGCTaGGAGTCCGGATGGCGAATC +
Preference number: 4 (lower is better)
Translates to: KRLGYFVMVSWANIYISFGCGGC*ESGWRI
Trigger: GATTCGCCATCCGGACTCTCAGCAACCACCGCAGCC...GAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp ACAAAAACAAAAACTTCTCACAGATTGGTAGCAAGCAGTTCAGACCACTTTAACTTGGTGCGGCTCCTGTaGCGTTCTAGGAGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: TKTKTSHRLVASSSDHFNLVRLL*RSRRGG
Trigger: CCCGCCCCTCCTAGAACGTCACAGGAGCCGCACCAA...GTTAAAGTGGTCTGAACTGCTTGCTACCAATCTGTGAGAAGTTTTTGTTTTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp GCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCGAAGGAATCACTCCGTaGGGGTTTTGGTGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: AVQTTLTLIKAIRWLNLIEGITP*GFWCGS
Trigger: GGAGCCGCACCAAAACCCTCACGGAGTGATTCCTTC...GATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp TTGGTAGCAAGCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAAGGAATCACTCCGTaGGGGTTTTGGTGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: LVASSSDHFNTDKSNSVAEGITP*GFWCGS
Trigger: GGAGCCGCACCAAAACCCTCACGGAGTGATTCCTTC...AGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGCTTGCTACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp GTAGCAAGCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAAGAAGGAATCACTCCGTaGGGGTTTTGGTGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: VASSSDHFNTDKSNSVAEEGITP*GFWCGS
Trigger: GGAGCCGCACCAAAACCCTCACGGAGTGATTCCTTC...TTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGCTTGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp CTGGAACATTGCTATCAAAATCTAAAGCCTAATTCCCTTCTTCAGAGGGTTGCTACGTGTGGAGATGGGTaGGGTGGTACTGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: LEHCYQNLKPNSLLQRVATCGDG*GGTGHW
Trigger: CCAGTGCCCAGTACCACCTCACCCATCTCCACACGT...AGCAACCCTCTGAAGAAGGGAATTAGGCTTTAGATTTTGATAGCAATGTTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp ACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTCCTTTATGAGTACTACGTGTGGAGATGGGTaGGGTGGTACTGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: TDKSNSVAELDPVSFMSTTCGDG*GGTGHW
Trigger: CCAGTGCCCAGTACCACCTCACCCATCTCCACACGT...AGTACTCATAAAGGACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp CATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTACAGAGTTTGTCCGGTaGGGAATACGTGTGGAGATG +
Preference number: 4 (lower is better)
Translates to: HSFREILVKTTARQVSTLTEFVR*GIRVEM
Trigger: CATCTCCACACGTATTCCTCACCGGACAAACTCTGT...AAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp TTGGTAGCAAGCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTAGGATCCATCGCCCCTaGAGCAGCAGGCTGTGCATT +
Preference number: 4 (lower is better)
Translates to: LVASSSDHFNTDKSNSVARIHRP*SSRLCI
Trigger: AATGCACAGCCTGCTGCTTCAGGGGCGATGGATCCT...AGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGCTTGCTACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp GGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCCTGGGAGGAGGAGGAAGAGTaGACCAACAGTGGGGAACTG +
Preference number: 4 (lower is better)
Translates to: GWAILSWCLGLTSIFHSWEEEEE*TNSGEL
Trigger: CAGTTCCCCACTGTTGGTTCACTCTTCCTCCTCCTC...CCAGGAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp GTAGCAAGCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAATGCTGCTGCTGTTGTTaGTGCTGCTCGAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: VASSSDHFNTDKSNSVAECCCCC*CCSSWV
Trigger: CACCCAGCTCGAGCAGCATCAACAACAGCAGCAGCA...TTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGCTTGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp ACATTCTTTTGCCCAGCCAATCTACTTGAAGAGTGGCTCTGTGATATACTGCAATGCTGCTGCTGTTGTTaGTGCTGCTCGAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: TFFCPANLLEEWLCDILQCCCCC*CCSSWV
Trigger: CACCCAGCTCGAGCAGCATCAACAACAGCAGCAGCA...TTGCAGTATATCACAGAGCCACTCTTCAAGTAGATTGGCTGGGCAAAAGAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp AATCTAAAGCCTAATTCCCTTCTTCAGAGGGTTGCTCGGGATGCAGCCCTGTGTCTAACTGCTGGAGAGTaGCCTACAGATGACAGTGTT +
Preference number: 4 (lower is better)
Translates to: NLKPNSLLQRVARDAALCLTAGE*PTDDSV
Trigger: AACACTGTCATCTGTAGGTCACTCTCCAGCAGTTAG...ACACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAGGGAATTAGGCTTTAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp ATCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGAGTAAGCCTCCAAAATaGTTTATACTTGCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: ILVKTTARQVSTLEAHRRSKPPK*FILAVW
Trigger: CCAGACAGCAAGTATAAATCATTTTGGAGGCTTACT...CCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp TCCAGAGTGCTGAGTGGAGGTGTAACTTGTCCTCAAAAGTGTCCGCATTATTCCCAACTAGGTACGTTCTaGTTCCCTCTCACCTCTCTC +
Preference number: 4 (lower is better)
Translates to: SRVLSGGVTCPQKCPHYSQLGTF*FPLTSL
Trigger: GAGAGAGGTGAGAGGGAATCAGAACGTACCTAGTTG...GGAATAATGCGGACACTTTTGAGGACAAGTTACACCTCCACTCAGCACTCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR GCA 90 bp CCTTCTTCAGAGGGTTGCTCGGGATGCAGCCCTGTGTTCTCTGGAAGGTTTCTGGCCAAAACATTCTTTTaGCCAGCCAATCTACTTGAA +
Preference number: 4 (lower is better)
Translates to: PSSEGCSGCSPVFSGRFLAKTFF*PANLLE
Trigger: TTCAAGTAGATTGGCTGGGCAAAAGAATGTTTTGGC...CAGAAACCTTCCAGAGAACACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp ATCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGACACAATGCCAGAAGTaGTTGAAGCAGAAATCTACA +
Preference number: 4 (lower is better)
Translates to: ILVKTTARQVSTLEAHRRTQCQK*LKQKST
Trigger: TGTAGATTTCTGCTTCAAGCACTTCTGGCATTGTGT...CCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR GCA 90 bp CCTTCTTCAGAGGGTTGCTCGGGATGCAGCCCTGTGTTCTCTGGAAGGTTTCTGTACAAAAACACACAATaGCAGAAGTGCTTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: PSSEGCSGCSPVFSGRFLYKNTQ*QKCLKQ
Trigger: CTGCTTCAAGCACTTCTGGCATTGTGTGTTTTTGTA...CAGAAACCTTCCAGAGAACACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR GCA 90 bp TCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGACACATCGTGTAAGTTaGTGGCTGACAAAAAGATCT +
Preference number: 4 (lower is better)
Translates to: SLKQQPGRFLPLRPTGGWTHRVS*WLTKRS
Trigger: AGATCTTTTTGTCAGCCAGCAACTTACACGATGTGT...CCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR GCA 90 bp AGGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCCTGGGGCGAAGTCGGAAATaGAGCCACCTATGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: RLGYFVMVSWANIYISFLGRSRK*SHLWRS
Trigger: GCTCCTCCATAGGTGGCTGCATTTCCGACTTCGCCC...CAGGAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487717.5
CDS-3UTR CCA 90 bp CTCCCACCCTCCCCCGACCCAATTTGGCCTTCCTTTCTCAAAACTAGCTTGCATACAGAAACCAAATATTaGCATGTCTTCCCGACAGAG +
Preference number: 4 (lower is better)
Translates to: LPPSPDPIWPSFLKTSLHTETKY*HVFPTE
Trigger: CTCTGTCGGGAAGACATGCCAATATTTGGTTTCTGT...ATGCAAGCTAGTTTTGAGAAAGGAAGGCCAAATTGGGTCGGGGGAGGGTGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CCA 90 bp TCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTGAAATCATCATGGGCTaGACAGAAACCAAATATTGG +
Preference number: 4 (lower is better)
Translates to: SSLKQQPGRFLPLRPTGGEIIMG*TETKYW
Trigger: CCAATATTTGGTTTCTGTCCAGCCCATGATGATTTC...ACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp TTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAATCAATAACCCCACAGTaGATGTCAGGATCAAACTCT +
Preference number: 4 (lower is better)
Translates to: LKQQPGRFLPLRPTGGWESITPQ*MSGSNS
Trigger: AGAGTTTGATCCTGACATCCACTGTGGGGTTATTGA...TTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp GTACTCACTGCTAGAGACATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCGGGTGTGGAGATTCATaGACTGGAGGAGGGTCAATG +
Preference number: 4 (lower is better)
Translates to: VLTARDIASGKSSLKQQPGCGDS*TGGGSM
Trigger: CATTGACCCTCCTCCAGTCCATGAATCTCCACACCC...GGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATGTCTCTAGCAGTGAGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp CATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACACATTGAGAAGCTGGCTCAGTaGCAGGCAGGGGAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: HEAEYLFTNQPTNPTKHIEKLAQ*QAGEGV
Trigger: CACACCCTCCCCTGCCTGCCACTGAGCCAGCTTCTC...AATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CCA 90 bp TTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAGAGTGAACCAACAGTaGGGAACTGTTTTTGCGTTT +
Preference number: 4 (lower is better)
Translates to: LKQQPGRFLPLRPTGGWERVNQQ*GTVFAF
Trigger: AAACGCAAAAACAGTTCCCCACTGTTGGTTCACTCT...TTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp TCCAGAGTGCTGAGTGGAGGTGTAACTTGTCCTCAAAAGTGTCCGCATTATTCCGTCCAGAGTGCTGAGTaGAGGTGTAACTTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: SRVLSGGVTCPQKCPHYSVQSAE*RCNLSS
Trigger: TGAGGACAAGTTACACCTCCACTCAGCACTCTGGAC...GGAATAATGCGGACACTTTTGAGGACAAGTTACACCTCCACTCAGCACTCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp TCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGATAAAAGCAATTCGGTaGCTGAACTTGATCCAGTGT +
Preference number: 4 (lower is better)
Translates to: SLKQQPGRFLPLRPTGGWIKAIR*LNLIQC
Trigger: ACACTGGATCAAGTTCAGCCACCGAATTGCTTTTAT...CCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp CCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTCAAATTACTCTCAAAAGGCTaGGCTATTTTGTCATGGTGT +
Preference number: 4 (lower is better)
Translates to: PGRFLPLRPTGGWENRLKLLSKG*AILSWC
Trigger: ACACCATGACAAAATAGCCCAGCCTTTTGAGAGTAA...TTTGAGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp GCTGAGTGGAGGTGTAACTTGTCCTCAAAAGTGTCCGCATTATTCCTCCCCGTGAATTACCAGCATTGGTaGTTTTCAACTCCGCCCCTA +
Preference number: 4 (lower is better)
Translates to: AEWRCNLSSKVSALFLPVNYQHW*FSTPPL
Trigger: TAGGGGCGGAGTTGAAAACCACCAATGCTGGTAATT...CACGGGGAGGAATAATGCGGACACTTTTGAGGACAAGTTACACCTCCACTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CCA 90 bp CATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGCTTGCATCATGATTTaGGTCTGCCCACCAACTCCA +
Preference number: 4 (lower is better)
Translates to: HSFREILVKTTARQVSTLACIMI*VCPPTP
Trigger: TGGAGTTGGTGGGCAGACCCAAATCATGATGCAAGC...AAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484332.1
CDS-3UTR TCA 90 bp TTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAGTAGGCCAAAAATCCTaGTCAATTTACCAATGGATC +
Preference number: 4 (lower is better)
Translates to: LKQQPGRFLPLRPTGGWEVGQKS*SIYQWI
Trigger: GATCCATTGGTAAATTGATCAGGATTTTTGGCCTAC...TTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR TCA 90 bp ACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACACACCCGACAGAGCCCCATaGCTTCGCGGTTTTTCCCAA +
Preference number: 4 (lower is better)
Translates to: TMKLNICLQTNQPTQPNTPDRAP*LRGFSQ
Trigger: TTGGGAAAAACCGCGAAGTCATGGGGCTCTGTCGGG...TGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR TCA 90 bp CAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTGGTTGGCTTTGGTATTaGGGGGCAGTTAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: QTTLTLIKAIRWLNLIQCGWLWY*GAVKAR
Trigger: CCTGGCCTTAACTGCCCCTCAATACCAAAGCCAACC...ACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp ACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACACAGAAGGAATCACTCCGTaGGGGTTTTGGTGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: TMKLNICLQTNQPTQPNTEGITP*GFWCGS
Trigger: GGAGCCGCACCAAAACCCTCACGGAGTGATTCCTTC...TGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR TCA 90 bp TTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAAAAGATACGTGTGGAGATGGGTaGGGTGGTACTGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: FTNQPTNPTKHISELTKDTCGDG*GGTGHW
Trigger: CCAGTGCCCAGTACCACCTCACCCATCTCCACACGT...ATCTTTTGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR TCA 90 bp GCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCGGAGATGCAGGTAGATaGGAGCAGGACTGGGGATGT +
Preference number: 4 (lower is better)
Translates to: AVQTTLTLIKAIRWLNLIGDAGR*EQDWGC
Trigger: ACATCCCCAGTCCTGCTCTCATCTACCTGCATCTCC...GATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp AATAAACATCTGAAGTGGCATGAAGGGGAGTGCATACAAAAACACACAATGCCAAGGATCCATCGCCCCTaGAGCAGCAGGCTGTGCATT +
Preference number: 4 (lower is better)
Translates to: NKHLKWHEGECIQKHTMPRIHRP*SSRLCI
Trigger: AATGCACAGCCTGCTGCTTCAGGGGCGATGGATCCT...TGGCATTGTGTGTTTTTGTATGCACTCCCCTTCATGCCACTTCAGATGTTTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR TCA 90 bp CTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAAAAAGGATCCATCGCCCCTaGAGCAGCAGGCTGTGCATT +
Preference number: 4 (lower is better)
Translates to: LFTNQPTNPTKHISELTKRIHRP*SSRLCI
Trigger: AATGCACAGCCTGCTGCTTCAGGGGCGATGGATCCT...TTTTGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR TCA 90 bp TCCAGAGTGCTGAGTGGAGGTGTAACTTGTCCTCAAAAGTGTCCGCATTATTCCCTGGATTTCAATTTCTaGGGTTTCCTGGACATGGGG +
Preference number: 4 (lower is better)
Translates to: SRVLSGGVTCPQKCPHYSLDFNF*GFLDMG
Trigger: CCCCATGTCCAGGAAACCTCAGAAATTGAAATCCAG...GGAATAATGCGGACACTTTTGAGGACAAGTTACACCTCCACTCAGCACTCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp AATCTAAAGCCTAATTCCCTTCTTCAGAGGGTTGCTCGGGATGCAGCCCTGTGTCTGCTACTGGCATTTTaGCAGTTAGTGCTGTTACCA +
Preference number: 4 (lower is better)
Translates to: NLKPNSLLQRVARDAALCLLLAF*QLVLLP
Trigger: TGGTAACAGCACTAACTGTCAAAATGCCAGTAGCAG...ACACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAGGGAATTAGGCTTTAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp TCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTTCTTTTCTTTCCTATaGGTTTGTCTAGAGGAGTGT +
Preference number: 4 (lower is better)
Translates to: SSLKQQPGRFLPLRPTGGFFSFL*VCLEEC
Trigger: ACACTCCTCTAGACAAACTCATAGGAAAGAAAAGAA...ACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp CCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTCAAATTCTTTTCTTTCCTATaGGTTTGTCTAGAGGAGTGT +
Preference number: 4 (lower is better)
Translates to: PGRFLPLRPTGGWENRLKFFSFL*VCLEEC
Trigger: ACACTCCTCTAGACAAACTCATAGGAAAGAAAAGAA...TTTGAGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp ACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACACATGCTGCTGCTGTTGTTaGTGCTGCTCGAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: TMKLNICLQTNQPTQPNTCCCCC*CCSSWV
Trigger: CACCCAGCTCGAGCAGCATCAACAACAGCAGCAGCA...TGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR TCA 90 bp AGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCATGCTGCTGCTGTTGTTaGTGCTGCTCGAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: SSDHFNTDKSNSVAELDPCCCCC*CCSSWV
Trigger: CACCCAGCTCGAGCAGCATCAACAACAGCAGCAGCA...TGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp CCTTCTTCAGAGGGTTGCTCGGGATGCAGCCCTGTGTTCTCTGGAAGGTTTCTGTCTTTCGGAACAACATaGTCGATCTGTAAATTCCAT +
Preference number: 4 (lower is better)
Translates to: PSSEGCSGCSPVFSGRFLSFGTT*SICKFH
Trigger: ATGGAATTTACAGATCGATCATGTTGTTCCGAAAGA...CAGAAACCTTCCAGAGAACACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR GCA 90 bp TATCTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACATGTGGTGGAATTGGGTaGCGGGTGAGGACGATGGCA +
Preference number: 4 (lower is better)
Translates to: YLFTNQPTNPTKHISELTCGGIG*RVRTMA
Trigger: TGCCATCGTCCTCACCCGGCACCCAATTCCACCACA...TGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR GCA 90 bp CTCACTGCTAGAGACATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCGGCTTAAGGAATGTGTCTTaGATGTCAAAGACCGGGTGC +
Preference number: 4 (lower is better)
Translates to: LTARDIASGKSSLKQQPGLRNVS*MSKTGC
Trigger: GCACCCGGTCTTTGACATGCAAGACACATTCCTTAA...GCCGGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATGTCTCTAGCAGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp TCCAGAGTGCTGAGTGGAGGTGTAACTTGTCCTCAAAAGTGTCCGCATTATTCCAGCTGTGCATTCAGATaGTTCTCCACCATGAGGTTG +
Preference number: 4 (lower is better)
Translates to: SRVLSGGVTCPQKCPHYSSCAFR*FSTMRL
Trigger: CAACCTCATGGTGGAGAAGCATCTGAATGCACAGCT...GGAATAATGCGGACACTTTTGAGGACAAGTTACACCTCCACTCAGCACTCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp GACACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACAGAGACGGTGGCTGCTaGCAGATAGCTGACTCCACA +
Preference number: 4 (lower is better)
Translates to: DTMKLNICLQTNQPTQPNRDGGC*QIADST
Trigger: TGTGGAGTCAGCTATCTGGCAGCAGCCACCGTCTCT...GTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR GCA 90 bp AGGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCCTGTGTAGAGACGGTGGCTaGTGCCAGATAGCTGACTCC +
Preference number: 4 (lower is better)
Translates to: RLGYFVMVSWANIYISFLCRDGG*CQIADS
Trigger: GGAGTCAGCTATCTGGCAGCAGCCACCGTCTCTACA...CAGGAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp GCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCTCCCTGACTGGTCATaGCGGACGTTCACCGCATTT +
Preference number: 4 (lower is better)
Translates to: AVQTTLTLIKAIRWLNLILPDWS*RTFTAF
Trigger: AAATGCGGTGAACGTCCGGCATGACCAGTCAGGGAG...GATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp ACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTCCTTTATGAGTACTCCTTCTTCAGAGGGTTaGTCGGGATGCAGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: TDKSNSVAELDPVSFMSTPSSEG*SGCSPV
Trigger: CACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAGG...AGTACTCATAAAGGACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp ACAAAAACAAAAACTTCTCACAGATTGGTAGCAAGCAGTTCAGACCACTTTAACCGCTCCGGCGAAGTTTaGACGTCAAGCCCCCGGACT +
Preference number: 4 (lower is better)
Translates to: TKTKTSHRLVASSSDHFNRSGEV*TSSPRT
Trigger: AGTCCGGGGGCTTGACGTGCAAACTTCGCCGGAGCG...GTTAAAGTGGTCTGAACTGCTTGCTACCAATCTGTGAGAAGTTTTTGTTTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000487717.5
CDS-3UTR CCA 90 bp AGACACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAAATGGCAACACGCTCCTaGTCGCTTCGCGAACTCCTC +
Preference number: 4 (lower is better)
Translates to: RHHEAEYLFTNQPTNPTKMATRS*SLRELL
Trigger: GAGGAGTTCGCGAAGCGACCAGGAGCGTGTTGCCAT...TTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CCA 90 bp TCCAGAGTGCTGAGTGGAGGTGTAACTTGTCCTCAAAAGTGTCCGCATTATTCCTCCGCTCCTTTTCTTTaGAGGGTAGGCCAAAAATCC +
Preference number: 4 (lower is better)
Translates to: SRVLSGGVTCPQKCPHYSSAPFL*RVGQKS
Trigger: GGATTTTTGGCCTACCCTCCAAAGAAAAGGAGCGGA...GGAATAATGCGGACACTTTTGAGGACAAGTTACACCTCCACTCAGCACTCTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CCA 90 bp GCTGAGTGGAGGTGTAACTTGTCCTCAAAAGTGTCCGCATTATTCCTCCCCGTGGCTGCAGTTTCTCTTTaGGTGATTTCAACAACTTGG +
Preference number: 4 (lower is better)
Translates to: AEWRCNLSSKVSALFLPVAAVSL*VISTTW
Trigger: CCAAGTTGTTGAAATCACCCAAAGAGAAACTGCAGC...CACGGGGAGGAATAATGCGGACACTTTTGAGGACAAGTTACACCTCCACTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp ACATTCTTTTGCCCAGCCAATCTACTTGAAGAGTGGCTCTGTGATATACTGCAAAGTAGCAGGACAGGTTaGCCCCACCGCAGATTTCAG +
Preference number: 4 (lower is better)
Translates to: TFFCPANLLEEWLCDILQSSRTG*PHRRFQ
Trigger: CTGAAATCTGCGGTGGGGCCAACCTGTCCTGCTACT...TTGCAGTATATCACAGAGCCACTCTTCAAGTAGATTGGCTGGGCAAAAGAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp GACACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACAGTAGCAGGACAGGTTaGCCCCACCGCAGATTTCAG +
Preference number: 4 (lower is better)
Translates to: DTMKLNICLQTNQPTQPNSSRTG*PHRRFQ
Trigger: CTGAAATCTGCGGTGGGGCCAACCTGTCCTGCTACT...GTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CCA 90 bp TTGGTAGCAAGCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTCGTTTTCTTCTACCCTaGACAGCCCTGCGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: LVASSSDHFNTDKSNSVARFLLP*TALRWV
Trigger: AACCCAGCGCAGGGCTGTCCAGGGTAGAAGAAAACG...AGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGCTTGCTACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp ACAAAAACAAAAACTTCTCACAGATTGGTAGCAAGCAGTTCAGACCACTTTAACGCAGCCTGGAGGCCTTaGAAGACTGGGGGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: TKTKTSHRLVASSSDHFNAAWRP*KTGGVR
Trigger: CCTCACACCCCCAGTCTTCCAAGGCCTCCAGGCTGC...GTTAAAGTGGTCTGAACTGCTTGCTACCAATCTGTGAGAAGTTTTTGTTTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp AGACACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAAAGGCAGGGGAGGGTGTaGAGATTCATGGACTGGAGG +
Preference number: 4 (lower is better)
Translates to: RHHEAEYLFTNQPTNPTKRQGRV*RFMDWR
Trigger: CCTCCAGTCCATGAATCTCCACACCCTCCCCTGCCT...TTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CCA 90 bp ACAAAAACAAAAACTTCTCACAGATTGGTAGCAAGCAGTTCAGACCACTTTAACGAGAAGCTGGCTCAGTaGCAGGCAGGGGAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: TKTKTSHRLVASSSDHFNEKLAQ*QAGEGV
Trigger: CACACCCTCCCCTGCCTGCCACTGAGCCAGCTTCTC...GTTAAAGTGGTCTGAACTGCTTGCTACCAATCTGTGAGAAGTTTTTGTTTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp CTATCCCTTGACATTTGTTCATGTTCTATACAGCAGCCAACACAAAGTCCAGCTCTTCGCCCTCCTCACTaGATAACCGAGAAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: LSLDICSCSIQQPTQSPALRPPH*ITEKLA
Trigger: AGCCAGCTTCTCGGTTATCCAGTGAGGAGGGCGAAG...AGCTGGACTTTGTGTTGGCTGCTGTATAGAACATGAACAAATGTCAAGGGATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CCA 90 bp GCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCTTCGCCCTCCTCACTaGATAACCGAGAAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: AVQTTLTLIKAIRWLNLILRPPH*ITEKLA
Trigger: AGCCAGCTTCTCGGTTATCCAGTGAGGAGGGCGAAG...GATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp GCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCAAAGGCCAGAGGGCGTaGAAGGGGATGAGGATGAAG +
Preference number: 4 (lower is better)
Translates to: AVQTTLTLIKAIRWLNLIKGQRA*KGMRMK
Trigger: CTTCATCCTCATCCCCTTCCACGCCCTCTGGCCTTT...GATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp GCTGAGTGGAGGTGTAACTTGTCCTCAAAAGTGTCCGCATTATTCCTCCCCGTGAGAGTGAACCAACAGTaGGGAACTGTTTTTGCGTTT +
Preference number: 4 (lower is better)
Translates to: AEWRCNLSSKVSALFLPVRVNQQ*GTVFAF
Trigger: AAACGCAAAAACAGTTCCCCACTGTTGGTTCACTCT...CACGGGGAGGAATAATGCGGACACTTTTGAGGACAAGTTACACCTCCACTCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp CAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTCAGTCCTTGTGCCCCTaGGATGGTGCCTGTGTGTTT +
Preference number: 4 (lower is better)
Translates to: QTTLTLIKAIRWLNLIQCQSLCP*DGACVF
Trigger: AAACACACAGGCACCATCCCAGGGGCACAAGGACTG...ACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp TGTTTGTGGCAGACAGAATCCAAAATGGCTAATTTCCTAATCCCGATGCTCTGTCAGTCCTTGTGCCCCTaGGATGGTGCCTGTGTGTTT +
Preference number: 4 (lower is better)
Translates to: CLWQTESKMANFLIPMLCQSLCP*DGACVF
Trigger: AAACACACAGGCACCATCCCAGGGGCACAAGGACTG...ACAGAGCATCGGGATTAGGAAATTAGCCATTTTGGATTCTGTCTGCCACAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CCA 90 bp GGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCCTGGAGGCCCACAGGAGGTTaGGAAAACAGACTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: GWAILSWCLGLTSIFHSWRPTGG*ENRLKG
Trigger: GCCTTTGAGTCTGTTTTCCCAACCTCCTGTGGGCCT...CCAGGAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp CCCTTCTTCAGAGGGTTGCTCGGGATGCAGCCCTGTGTTCTCTGGAAGGTTTCTAATCTACTTGAAGAGTaGCTCTGTGATATACTGCAA +
Preference number: 4 (lower is better)
Translates to: PFFRGLLGMQPCVLWKVSNLLEE*LCDILQ
Trigger: TTGCAGTATATCACAGAGCCACTCTTCAAGTAGATT...AGAAACCTTCCAGAGAACACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp TCCAGAGTGCTGAGTGGAGGTGTAACTTGTCCTCAAAAGTGTCCGCATTATTCCTCTCTGGAAGGTTTCTaGTCTCCAGTTAAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: SRVLSGGVTCPQKCPHYSSLEGF*SPVKVP
Trigger: AGGCACCTTAACTGGAGACCAGAAACCTTCCAGAGA...GGAATAATGCGGACACTTTTGAGGACAAGTTACACCTCCACTCAGCACTCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp CAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTCCAACTATGCCAAACTaGCCCATCCATGCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: QTTLTLIKAIRWLNLIQCPTMPN*PIHALS
Trigger: GGAGAGGGCATGGATGGGCCAGTTTGGCATAGTTGG...ACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CCA 90 bp GTAGCAAGCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAAGCAGAAGGGCTGCTTTaGAGAGGCGTCTTGCTACCT +
Preference number: 4 (lower is better)
Translates to: VASSSDHFNTDKSNSVAEAEGLL*RGVLLP
Trigger: AGGTAGCAAGACGCCTCTCCAAAGCAGCCCTTCTGC...TTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGCTTGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484332.1
CDS-3UTR CCA 90 bp ACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTAATATGCTCCATGTTTaGGCTTATGTAACATTTGCT +
Preference number: 4 (lower is better)
Translates to: TARQVSTLEAHRRLGKQTNMLHV*AYVTFA
Trigger: AGCAAATGTTACATAAGCCCAAACATGGAGCATATT...AGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484332.1
CDS-3UTR TCA 90 bp TCAGCGCCTTGGAAATTTTACCCTGTGTTCGGCAACTTCGTGTGTTCTTCTAAGGAAATGCCTGCGGTTTaGCAACCTGATTACAGTCGT +
Preference number: 4 (lower is better)
Translates to: SAPWKFYPVFGNFVCSSKEMPAV*QPDYSR
Trigger: ACGACTGTAATCAGGTTGTCAAACCGCAGGCATTTC...CTTAGAAGAACACACGAAGTTGCCGAACACAGGGTAAAATTTCCAAGGCGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR TCA 90 bp ACAAAAACTTCTCACAGATTGGTAGCAAGCAGTTCAGACCACTTTAACACTGATGCCTGGTGTTCCCCCTaGGCTGCAGTTTCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: TKTSHRLVASSSDHFNTDAWCSP*AAVSLW
Trigger: CCAAAGAGAAACTGCAGCTCAGGGGGAACACCAGGC...ATCAGTGTTAAAGTGGTCTGAACTGCTTGCTACCAATCTGTGAGAAGTTTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp AGTGGCATGAAGGGGAGTGCATACAAAAACACACAATGCCAGAAGTGCTTGAAGCTGGATTTCAATTTCTaGGGTTTCCTGGACATGGGG +
Preference number: 4 (lower is better)
Translates to: SGMKGSAYKNTQCQKCLKLDFNF*GFLDMG
Trigger: CCCCATGTCCAGGAAACCTCAGAAATTGAAATCCAG...CTTCAAGCACTTCTGGCATTGTGTGTTTTTGTATGCACTCCCCTTCATGCCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR TCA 90 bp TGTTTGTGGCAGACAGAATCCAAAATGGCTAATTTCCTAATCCCGATGCTCTGTTTTGCGTTTCTTTCCTaGGCCGCCACTGGTACTGCT +
Preference number: 4 (lower is better)
Translates to: CLWQTESKMANFLIPMLCFAFLS*AATGTA
Trigger: AGCAGTACCAGTGGCGGCTCAGGAAAGAAACGCAAA...ACAGAGCATCGGGATTAGGAAATTAGCCATTTTGGATTCTGTCTGCCACAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR TCA 90 bp CATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACACATTGGAAGATGTTACCGTTaGGGGGTAGGGAGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: HEAEYLFTNQPTNPTKHIGRCYR*GVGRPR
Trigger: TCTGGGCCTCCCTACCCCTCAACGGTAACATCTTCC...AATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR TCA 90 bp ACATTCTTTTGCCCAGCCAATCTACTTGAAGAGTGGCTCTGTGATATACTGCAATCACACTCATCCTCTTaGTGGATTCAGCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: TFFCPANLLEEWLCDILQSHSSS*WIQQGS
Trigger: GGAGCCCTGCTGAATCCATCAAGAGGATGAGTGTGA...TTGCAGTATATCACAGAGCCACTCTTCAAGTAGATTGGCTGGGCAAAAGAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp TTGGTAGCAAGCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTTCACACTCATCCTCTTaGTGGATTCAGCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LVASSSDHFNTDKSNSVASHSSS*WIQQGS
Trigger: GGAGCCCTGCTGAATCCATCAAGAGGATGAGTGTGA...AGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGCTTGCTACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp GCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCAACTGCCGTGGGAGTTaGCAGGCAGTTCATTGGACT +
Preference number: 4 (lower is better)
Translates to: AVQTTLTLIKAIRWLNLINCRGS*QAVHWT
Trigger: AGTCCAATGAACTGCCTGTCAACTCCCACGGCAGTT...GATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp GACACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACAACTGCCGTGGGAGTTaGCAGGCAGTTCATTGGACT +
Preference number: 4 (lower is better)
Translates to: DTMKLNICLQTNQPTQPNNCRGS*QAVHWT
Trigger: AGTCCAATGAACTGCCTGTCAACTCCCACGGCAGTT...GTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR TCA 90 bp TTGGTAGCAAGCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTAACTGCCGTGGGAGTTaGCAGGCAGTTCATTGGACT +
Preference number: 4 (lower is better)
Translates to: LVASSSDHFNTDKSNSVANCRGS*QAVHWT
Trigger: AGTCCAATGAACTGCCTGTCAACTCCCACGGCAGTT...AGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGCTTGCTACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp AGGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCCTGAACTGCCGTGGGAGTTaGCAGGCAGTTCATTGGACT +
Preference number: 4 (lower is better)
Translates to: RLGYFVMVSWANIYISFLNCRGS*QAVHWT
Trigger: AGTCCAATGAACTGCCTGTCAACTCCCACGGCAGTT...CAGGAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp AAAAGGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCTGCTGCTGCTGTTGTTaGTGCTGCTCGAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: KRLGYFVMVSWANIYISFCCCCC*CCSSWV
Trigger: CACCCAGCTCGAGCAGCATCAACAACAGCAGCAGCA...GAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp GCTGAGTGGAGGTGTAACTTGTCCTCAAAAGTGTCCGCATTATTCCTCCCCGTGAGTAAGCCTCCAAAATaGTTTATACTTGCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: AEWRCNLSSKVSALFLPVSKPPK*FILAVW
Trigger: CCAGACAGCAAGTATAAATCATTTTGGAGGCTTACT...CACGGGGAGGAATAATGCGGACACTTTTGAGGACAAGTTACACCTCCACTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp AATCTAAAGCCTAATTCCCTTCTTCAGAGGGTTGCTCGGGATGCAGCCCTGTGTATCCAAATAAACATCTaGAGTGGCATGAAGGGGAGT +
Preference number: 4 (lower is better)
Translates to: NLKPNSLLQRVARDAALCIQINI*SGMKGS
Trigger: ACTCCCCTTCATGCCACTTCAGATGTTTATTTGGAT...ACACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAGGGAATTAGGCTTTAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR TCA 90 bp GGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCCTGGCCCACTTCATCTGTATaGATCCACTCCCGAGACACT +
Preference number: 4 (lower is better)
Translates to: GWAILSWCLGLTSIFHSWPTSSV*IHSRDT
Trigger: AGTGTCTCGGGAGTGGATTCATACAGATGAAGTGGG...CCAGGAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR TCA 90 bp AGTGGCATGAAGGGGAGTGCATACAAAAACACACAATGCCAGAAGTGCTTGAAGACCCCCTGGACAGAATaGGCGACATTAAGAAATTCC +
Preference number: 4 (lower is better)
Translates to: SGMKGSAYKNTQCQKCLKTPWTE*ATLRNS
Trigger: GGAATTTCTTAATGTCGCTCATTCTGTCCAGGGGGT...CTTCAAGCACTTCTGGCATTGTGTGTTTTTGTATGCACTCCCCTTCATGCCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR GCA 90 bp ACAAAAACTTCTCACAGATTGGTAGCAAGCAGTTCAGACCACTTTAACACTGATTGTGGTGGAATTGGGTaGCGGGTGAGGACGATGGCA +
Preference number: 4 (lower is better)
Translates to: TKTSHRLVASSSDHFNTDCGGIG*RVRTMA
Trigger: TGCCATCGTCCTCACCCGGCACCCAATTCCACCACA...ATCAGTGTTAAAGTGGTCTGAACTGCTTGCTACCAATCTGTGAGAAGTTTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295900.10
CDS-3UTR GCA 90 bp CTGGAACATTGCTATCAAAATCTAAAGCCTAATTCCCTTCTTCAGAGGGTTGCTCGGCCAAAGGCGGCTTaGTGGATGAGCTATGTCTTC +
Preference number: 4 (lower is better)
Translates to: LEHCYQNLKPNSLLQRVARPKAA*WMSYVF
Trigger: GAAGACATAGCTCATCCAGCAAGCCGCCTTTGGCCG...AGCAACCCTCTGAAGAAGGGAATTAGGCTTTAGATTTTGATAGCAATGTTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp GAAAGGAGGGTGTGTGTCAGGGCAATCCTATACATGCATCACAAAAGACCTTCATTGCACTGCCTCCTTTaGTTTTGGACAGAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: ERRVCVRAILYMHHKRPSLHCLL*FWTEKG
Trigger: TCCCTTCTCTGTCCAAAAGCAAAGGAGGCAGTGCAA...TGAAGGTCTTTTGTGATGCATGTATAGGATTGCCCTGACACACACCCTCCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR GCA 90 bp AGTGGCATGAAGGGGAGTGCATACAAAAACACACAATGCCAGAAGTGCTTGAAGTGCTTCCACTTGCACTaGCTCCTTTGCTTTTGGACA +
Preference number: 4 (lower is better)
Translates to: SGMKGSAYKNTQCQKCLKCFHLH*LLCFWT
Trigger: TGTCCAAAAGCAAAGGAGGCAGTGCAAGTGGAAGCA...CTTCAAGCACTTCTGGCATTGTGTGTTTTTGTATGCACTCCCCTTCATGCCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR GCA 90 bp CTGGAAGGTTTCTGGTCTCCAGTTAAGGTGCCTAACTGCTGGAGAGTGACCTACCAGATTTCAGTAGTGTaGCATCCATTTTCGGATGAA +
Preference number: 4 (lower is better)
Translates to: LEGFWSPVKVPNCWRVTYQISVV*HPFSDE
Trigger: TTCATCCGAAAATGGATGGCACACTACTGAAATCTG...GTAGGTCACTCTCCAGCAGTTAGGCACCTTAACTGGAGACCAGAAACCTTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp AGACACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAATTCCAGAGTGGGCGGTaGAGGAAGCCCTTTGCCATT +
Preference number: 4 (lower is better)
Translates to: RHHEAEYLFTNQPTNPTKFQSGR*RKPFAI
Trigger: AATGGCAAAGGGCTTCCTGCACCGCCCACTCTGGAA...TTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR GCA 90 bp AGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCATTCCAGAGTGGGCGGTaGAGGAAGCCCTTTGCCATT +
Preference number: 4 (lower is better)
Translates to: SSDHFNTDKSNSVAELDPFQSGR*RKPFAI
Trigger: AATGGCAAAGGGCTTCCTGCACCGCCCACTCTGGAA...TGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp CATTGCTATCAAAATCTAAAGCCTAATTCCCTTCTTCAGAGGGTTGCTCGGGATATGTCAAAGACCGGGTaGAGGGCTTCTTGGTGTCGA +
Preference number: 4 (lower is better)
Translates to: HCYQNLKPNSLLQRVARDMSKTG*RASWCR
Trigger: TCGACACCAAGAAGCCCTGCACCCGGTCTTTGACAT...ATCCCGAGCAACCCTCTGAAGAAGGGAATTAGGCTTTAGATTTTGATAGCAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp CATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTTTAAGGAATGTGTCTTaGATGTCAAAGACCGGGTGC +
Preference number: 4 (lower is better)
Translates to: HSFREILVKTTARQVSTLLRNVS*MSKTGC
Trigger: GCACCCGGTCTTTGACATGCAAGACACATTCCTTAA...AAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp AGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCATACCCTGGACAGCCCTaGGCTGGGTTAAGGAATGTG +
Preference number: 4 (lower is better)
Translates to: SSDHFNTDKSNSVAELDPYPGQP*AGLRNV
Trigger: CACATTCCTTAACCCAGCGCAGGGCTGTCCAGGGTA...TGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp ACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACACATACCCTGGACAGCCCTaGGCTGGGTTAAGGAATGTG +
Preference number: 4 (lower is better)
Translates to: TMKLNICLQTNQPTQPNTYPGQP*AGLRNV
Trigger: CACATTCCTTAACCCAGCGCAGGGCTGTCCAGGGTA...TGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR GCA 90 bp AATCTAAAGCCTAATTCCCTTCTTCAGAGGGTTGCTCGGGATGCAGCCCTGTGTAAATGTGCAAAAAGATaGTGGCTGAGGATGATGACC +
Preference number: 4 (lower is better)
Translates to: NLKPNSLLQRVARDAALCKCAKR*WLRMMT
Trigger: GGTCATCATCCTCAGCCAGCATCTTTTTGCACATTT...ACACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAGGGAATTAGGCTTTAGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp TTGGTAGCAAGCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGCCGGCTCCCAAATGTaGAAAAAGATGCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: LVASSSDHFNTDKSNSVAAGSQM*KKMLAE
Trigger: CTCAGCCAGCATCTTTTTGCACATTTGGGAGCCGGC...AGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGCTTGCTACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp CTGGAACATTGCTATCAAAATCTAAAGCCTAATTCCCTTCTTCAGAGGGTTGCTAGAGACGGTGGCTGCTaGCAGATAGCTGACTCCACA +
Preference number: 4 (lower is better)
Translates to: LEHCYQNLKPNSLLQRVARDGGC*QIADST
Trigger: TGTGGAGTCAGCTATCTGGCAGCAGCCACCGTCTCT...AGCAACCCTCTGAAGAAGGGAATTAGGCTTTAGATTTTGATAGCAATGTTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp TATCTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACATGTAGAGACGGTGGCTaGTGCCAGATAGCTGACTCC +
Preference number: 4 (lower is better)
Translates to: YLFTNQPTNPTKHISELTCRDGG*CQIADS
Trigger: GGAGTCAGCTATCTGGCAGCAGCCACCGTCTCTACA...TGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR GCA 90 bp AGACACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACTCCCTGACTGGTCATaGCGGACGTTCACCGCATTT +
Preference number: 4 (lower is better)
Translates to: RHHEAEYLFTNQPTNPTKLPDWS*RTFTAF
Trigger: AAATGCGGTGAACGTCCGGCATGACCAGTCAGGGAG...TTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR GCA 90 bp ACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACACAGTGCCCCTGGGATGGTaGCTGTGTGTTTCATGTGGA +
Preference number: 4 (lower is better)
Translates to: TMKLNICLQTNQPTQPNTVPLGW*LCVSCG
Trigger: TCCACATGAAACACACAGGCACCATCCCAGGGGCAC...TGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR GCA 90 bp ACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTCCTTTATGAGTACTGTGCCCCTGGGATGGTaGCTGTGTGTTTCATGTGGA +
Preference number: 4 (lower is better)
Translates to: TDKSNSVAELDPVSFMSTVPLGW*LCVSCG
Trigger: TCCACATGAAACACACAGGCACCATCCCAGGGGCAC...AGTACTCATAAAGGACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp AACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTCCTTTATGAGTGTTCATCAGTCCTTGTaGCCCTGGGATGGTGCCTGT +
Preference number: 4 (lower is better)
Translates to: NTDKSNSVAELDPVSFMSVHQSL*PWDGAC
Trigger: ACAGGCACCATCCCAGGGGCACAAGGACTGATGAAC...ACTCATAAAGGACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp CTGGAACATTGCTATCAAAATCTAAAGCCTAATTCCCTTCTTCAGAGGGTTGCTCAGCTGTCAGGGACGTaGCTTTGGCTGATGAAGGAG +
Preference number: 4 (lower is better)
Translates to: LEHCYQNLKPNSLLQRVAQLSGT*LWLMKE
Trigger: CTCCTTCATCAGCCAAAGGCACGTCCCTGACAGCTG...AGCAACCCTCTGAAGAAGGGAATTAGGCTTTAGATTTTGATAGCAATGTTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp ACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTCCTTTATGAGTACTCAGCTGTCAGGGACGTaGCTTTGGCTGATGAAGGAG +
Preference number: 4 (lower is better)
Translates to: TDKSNSVAELDPVSFMSTQLSGT*LWLMKE
Trigger: CTCCTTCATCAGCCAAAGGCACGTCCCTGACAGCTG...AGTACTCATAAAGGACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp ACGATCAGCGCCTTGGAAATTTTACCCTGTGTTCGGCAACTTCGTGTGTTCTTCTCTTCTAAGCAACAGTaGCTGTTACTCGTGTCAGGA +
Preference number: 4 (lower is better)
Translates to: TISALEILPCVRQLRVFFSSKQQ*LLLVSG
Trigger: TCCTGACACGAGTAACAGGCACTGTTGCTTAGAAGA...GAAGAACACACGAAGTTGCCGAACACAGGGTAAAATTTCCAAGGCGCTGATCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR GCA 90 bp TCAGCGCCTTGGAAATTTTACCCTGTGTTCGGCAACTTCGTGTGTTCTTCTAAGCTACCCATACCCCATTaGACTTGTCACCAAGGAATC +
Preference number: 4 (lower is better)
Translates to: SAPWKFYPVFGNFVCSSKLPIPH*TCHQGI
Trigger: GATTCCTTGGTGACAAGTGCAATGGGGTATGGGTAG...CTTAGAAGAACACACGAAGTTGCCGAACACAGGGTAAAATTTCCAAGGCGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CCA 90 bp TATCTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAACTCTGTGGTGGAATTaGGTGCCGGGTGAGGACGAT +
Preference number: 4 (lower is better)
Translates to: YLFTNQPTNPTKHISELTTLWWN*VPGEDD
Trigger: ATCGTCCTCACCCGGCACCCAATTCCACCACAGAGT...TGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CCA 90 bp TATCTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAGAAATCCCGACTCTGTaGTGGAATTGGGTGCCGGGT +
Preference number: 4 (lower is better)
Translates to: YLFTNQPTNPTKHISELTEIPTL*WNWVPG
Trigger: ACCCGGCACCCAATTCCACCACAGAGTCGGGATTTC...TGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CCA 90 bp TTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAATTCTGTTCAGATCTaGGTTCAAAATGAGACACGA +
Preference number: 4 (lower is better)
Translates to: LKQQPGRFLPLRPTGGWENSVQI*VQNETR
Trigger: TCGTGTCTCATTTTGAACCCAGATCTGAACAGAATT...TTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295900.10
CDS-3UTR CCA 90 bp GAAAGGAGGGTGTGTGTCAGGGCAATCCTATACATGCATCACAAAAGACCTTCACCAAAGGCGGCTTGCTaGATGAGCTATGTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: ERRVCVRAILYMHHKRPSPKAAC*MSYVFF
Trigger: AAAGAAGACATAGCTCATCCAGCAAGCCGCCTTTGG...TGAAGGTCTTTTGTGATGCATGTATAGGATTGCCCTGACACACACCCTCCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CCA 90 bp AGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAAGTAGCAGGACAGGTTaGCCCCACCGCAGATTTCAG +
Preference number: 4 (lower is better)
Translates to: SSDHFNTDKSNSVAELDPSSRTG*PHRRFQ
Trigger: CTGAAATCTGCGGTGGGGCCAACCTGTCCTGCTACT...TGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp CCAAAACATTCTTTTGCCCAGCCAATCTACTTGAAGAGTGGCTCTGTGATATACGTTTCTTTTCCAGAGTaGGCGGTGCAGGAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: PKHSFAQPIYLKSGSVIYVSFPE*AVQEAL
Trigger: AAGGGCTTCCTGCACCGCCCACTCTGGAAAAGAAAC...GTATATCACAGAGCCACTCTTCAAGTAGATTGGCTGGGCAAAAGAATGTTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp AGACACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACGTTTTCTTCTACCCTaGACAGCCCTGCGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: RHHEAEYLFTNQPTNPTKRFLLP*TALRWV
Trigger: AACCCAGCGCAGGGCTGTCCAGGGTAGAAGAAAACG...TTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CCA 90 bp GTAGCAAGCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAAGGGTGTGGAGATTCATaGACTGGAGGAGGGTCAATG +
Preference number: 4 (lower is better)
Translates to: VASSSDHFNTDKSNSVAEGCGDS*TGGGSM
Trigger: CATTGACCCTCCTCCAGTCCATGAATCTCCACACCC...TTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGCTTGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp ACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACACACTTCGCCCTCCTCACTaGATAACCGAGAAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: TMKLNICLQTNQPTQPNTLRPPH*ITEKLA
Trigger: AGCCAGCTTCTCGGTTATCCAGTGAGGAGGGCGAAG...TGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CCA 90 bp CATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAAGTCGATTCCACCTaGAGTCAAACACGTAATAGC +
Preference number: 4 (lower is better)
Translates to: HSFREILVKTTARQVSTLEVDST*SQTRNS
Trigger: GCTATTACGTGTTTGACTCCAGGTGGAATCGACTTC...AAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp CTATCCCTTGACATTTGTTCATGTTCTATACAGCAGCCAACACAAAGTCCAGCTTGGGTGAGGTGGTACTaGGCACTGGTGGGATTTTCT +
Preference number: 4 (lower is better)
Translates to: LSLDICSCSIQQPTQSPAWVRWY*ALVGFS
Trigger: AGAAAATCCCACCAGTGCCCAGTACCACCTCACCCA...AGCTGGACTTTGTGTTGGCTGCTGTATAGAACATGAACAAATGTCAAGGGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CCA 90 bp CAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTTGGGTGAGGTGGTACTaGGCACTGGTGGGATTTTCT +
Preference number: 4 (lower is better)
Translates to: QTTLTLIKAIRWLNLIQCWVRWY*ALVGFS
Trigger: AGAAAATCCCACCAGTGCCCAGTACCACCTCACCCA...ACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp AGGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCCTGTGGGTGAGGTGGTACTaGGCACTGGTGGGATTTTCT +
Preference number: 4 (lower is better)
Translates to: RLGYFVMVSWANIYISFLWVRWY*ALVGFS
Trigger: AGAAAATCCCACCAGTGCCCAGTACCACCTCACCCA...CAGGAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp GTAGCAAGCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAAGAATACGTGTGGAGATaGGTGAGGTGGTACTGGGCA +
Preference number: 4 (lower is better)
Translates to: VASSSDHFNTDKSNSVAEEYVWR*VRWYWA
Trigger: TGCCCAGTACCACCTCACCCATCTCCACACGTATTC...TTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGCTTGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp ACATTCTTTTGCCCAGCCAATCTACTTGAAGAGTGGCTCTGTGATATACTGCAAGAATACGTGTGGAGATaGGTGAGGTGGTACTGGGCA +
Preference number: 4 (lower is better)
Translates to: TFFCPANLLEEWLCDILQEYVWR*VRWYWA
Trigger: TGCCCAGTACCACCTCACCCATCTCCACACGTATTC...TTGCAGTATATCACAGAGCCACTCTTCAAGTAGATTGGCTGGGCAAAAGAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp GCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCGGTGAGGAATACGTGTaGAGATGGGTGAGGTGGTAC +
Preference number: 4 (lower is better)
Translates to: AVQTTLTLIKAIRWLNLIGEEYV*RWVRWY
Trigger: GTACCACCTCACCCATCTCCACACGTATTCCTCACC...GATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp TCCAGAGTGCTGAGTGGAGGTGTAACTTGTCCTCAAAAGTGTCCGCATTATTCCTGTGGTTCCATGAGCTaGTACCGATTTGCTATTTGG +
Preference number: 4 (lower is better)
Translates to: SRVLSGGVTCPQKCPHYSCGSMS*YRFAIW
Trigger: CCAAATAGCAAATCGGTACCAGCTCATGGAACCACA...GGAATAATGCGGACACTTTTGAGGACAAGTTACACCTCCACTCAGCACTCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp ACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACACAAAAGGCCAGAGGGCGTaGAAGGGGATGAGGATGAAG +
Preference number: 4 (lower is better)
Translates to: TMKLNICLQTNQPTQPNTKGQRA*KGMRMK
Trigger: CTTCATCCTCATCCCCTTCCACGCCCTCTGGCCTTT...TGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CCA 90 bp TCAGCGCCTTGGAAATTTTACCCTGTGTTCGGCAACTTCGTGTGTTCTTCTAAGTTGAGGCCGATGCTATaGGAAGATGTTACCGTTGAG +
Preference number: 4 (lower is better)
Translates to: SAPWKFYPVFGNFVCSSKLRPML*EDVTVE
Trigger: CTCAACGGTAACATCTTCCCATAGCATCGGCCTCAA...CTTAGAAGAACACACGAAGTTGCCGAACACAGGGTAAAATTTCCAAGGCGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CCA 90 bp GGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCCTGGTGGGAAAAACTGCCGTaGGAGTTGACAGGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: GWAILSWCLGLTSIFHSWWEKLP*ELTGSS
Trigger: TGAACTGCCTGTCAACTCCCACGGCAGTTTTTCCCA...CCAGGAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp TCAGCGCCTTGGAAATTTTACCCTGTGTTCGGCAACTTCGTGTGTTCTTCTAAGCTTTGGCAACCTTTGTaGGTTTGCTGCTGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: SAPWKFYPVFGNFVCSSKLWQPL*VCCCCC
Trigger: ACAACAGCAGCAGCAAACCCACAAAGGTTGCCAAAG...CTTAGAAGAACACACGAAGTTGCCGAACACAGGGTAAAATTTCCAAGGCGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CCA 90 bp GAAAGGAGGGTGTGTGTCAGGGCAATCCTATACATGCATCACAAAAGACCTTCACTTTGGCAACCTTTGTaGGTTTGCTGCTGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: ERRVCVRAILYMHHKRPSLWQPL*VCCCCC
Trigger: ACAACAGCAGCAGCAAACCCACAAAGGTTGCCAAAG...TGAAGGTCTTTTGTGATGCATGTATAGGATTGCCCTGACACACACCCTCCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CCA 90 bp GACACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACTCACGGCTGGCACTTTaGCAACCTTTGTGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: DTMKLNICLQTNQPTQPNSRLAL*QPLWVC
Trigger: GCAAACCCACAAAGGTTGCCAAAGTGCCAGCCGTGA...GTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CCA 90 bp TTGGTAGCAAGCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTCTTGTGCCCCTGGGATaGTGCCTGTGTGTTTCATGT +
Preference number: 4 (lower is better)
Translates to: LVASSSDHFNTDKSNSVALVPLG*CLCVSC
Trigger: ACATGAAACACACAGGCACCATCCCAGGGGCACAAG...AGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGCTTGCTACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp CCAAAACATTCTTTTGCCCAGCCAATCTACTTGAAGAGTGGCTCTGTGATATACCTTGTGCCCCTGGGATaGTGCCTGTGTGTTTCATGT +
Preference number: 4 (lower is better)
Translates to: PKHSFAQPIYLKSGSVIYLVPLG*CLCVSC
Trigger: ACATGAAACACACAGGCACCATCCCAGGGGCACAAG...GTATATCACAGAGCCACTCTTCAAGTAGATTGGCTGGGCAAAAGAATGTTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp TATCTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACACAGTCCTTGTGCCCCTaGGATGGTGCCTGTGTGTTT +
Preference number: 4 (lower is better)
Translates to: YLFTNQPTNPTKHISELTQSLCP*DGACVF
Trigger: AAACACACAGGCACCATCCCAGGGGCACAAGGACTG...TGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CCA 90 bp GCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCTCAGGGACGTGCCTTTaGCTGATGAAGGAGGGAACT +
Preference number: 4 (lower is better)
Translates to: AVQTTLTLIKAIRWLNLISGTCL*LMKEGT
Trigger: AGTTCCCTCCTTCATCAGCCAAAGGCACGTCCCTGA...GATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp GGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCCTGGAACATAATTCTGTTCAGATCTaGCGGCTGGCTGCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: GYFVMVSWANIYISFLEHNSVQI*RLAAAS
Trigger: GGAGGCCGCAGCCAGCCGCCAGATCTGAACAGAATT...ATGTTCCAGGAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674280.1
CDS-3UTR TCA 90 bp GACACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACTCACAGAGGGTGTCATaGTTCTACCATGGGGAACTC +
Preference number: 4 (lower is better)
Translates to: DTMKLNICLQTNQPTQPNSQRVS*FYHGEL
Trigger: GAGTTCCCCATGGTAGAATCATGACACCCTCTGTGA...GTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR TCA 90 bp AGGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCCTGTCACAGAGGGTGTCATaGTTCTACCATGGGGAACTC +
Preference number: 4 (lower is better)
Translates to: RLGYFVMVSWANIYISFLSQRVS*FYHGEL
Trigger: GAGTTCCCCATGGTAGAATCATGACACCCTCTGTGA...CAGGAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp CATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACACATTGGTTGGCTTTGGTATTaGGGGGCAGTTAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: HEAEYLFTNQPTNPTKHIGWLWY*GAVKAR
Trigger: CCTGGCCTTAACTGCCCCTCAATACCAAAGCCAACC...AATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR TCA 90 bp CATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTCTGAGGATGATGACCTaGATAATGACAGTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: HSFREILVKTTARQVSTLLRMMT*IMTVQF
Trigger: AAACTGGACTGTCATTATTCAGGTCATCATCCTCAG...AAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp TGTTTGTGGCAGACAGAATCCAAAATGGCTAATTTCCTAATCCCGATGCTCTGTGCTGACTCCACATTGTaGTGTCGGCACAGAGTTTGT +
Preference number: 4 (lower is better)
Translates to: CLWQTESKMANFLIPMLCADSTL*CRHRVC
Trigger: ACAAACTCTGTGCCGACATCACAATGTGGAGTCAGC...ACAGAGCATCGGGATTAGGAAATTAGCCATTTTGGATTCTGTCTGCCACAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR TCA 90 bp GTAGCAAGCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAAGCTGACTCCACATTGTaGTGTCGGCACAGAGTTTGT +
Preference number: 4 (lower is better)
Translates to: VASSSDHFNTDKSNSVAEADSTL*CRHRVC
Trigger: ACAAACTCTGTGCCGACATCACAATGTGGAGTCAGC...TTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGCTTGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp AGACACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACTGCTGCCAGATAGCTaGCTCCACATTGTGATGTCG +
Preference number: 4 (lower is better)
Translates to: RHHEAEYLFTNQPTNPTKLLPDS*LHIVMS
Trigger: CGACATCACAATGTGGAGTCAGCTATCTGGCAGCAG...TTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR TCA 90 bp CATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACACATTGGAGATGCAGGTAGATaGGAGCAGGACTGGGGATGT +
Preference number: 4 (lower is better)
Translates to: HEAEYLFTNQPTNPTKHIGDAGR*EQDWGC
Trigger: ACATCCCCAGTCCTGCTCTCATCTACCTGCATCTCC...AATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR TCA 90 bp TATCTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACATTTGCGTTTCTTTCCTaGGCCGCCACTGGTACTGCT +
Preference number: 4 (lower is better)
Translates to: YLFTNQPTNPTKHISELTFAFLS*AATGTA
Trigger: AGCAGTACCAGTGGCGGCTCAGGAAAGAAACGCAAA...TGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR TCA 90 bp TTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAAAAGATGAGGAGGAGGAAGAGTaGACCAACAGTGGGGAACTG +
Preference number: 4 (lower is better)
Translates to: FTNQPTNPTKHISELTKDEEEEE*TNSGEL
Trigger: CAGTTCCCCACTGTTGGTTCACTCTTCCTCCTCCTC...ATCTTTTGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR TCA 90 bp ACTTGTTATTGTGGATCCTATTCACATCTTTCGGAACAACATGATCGATCTGTAGGAAGATGTTACCGTTaGGGGGTAGGGAGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: TCYCGSYSHLSEQHDRSVGRCYR*GVGRPR
Trigger: TCTGGGCCTCCCTACCCCTCAACGGTAACATCTTCC...TACAGATCGATCATGTTGTTCCGAAAGATGTGAATAGGATCCACAATAACAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR TCA 90 bp GCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCTATTCGTCACACAGTTaGGGCCGATGCTATGGGAAG +
Preference number: 4 (lower is better)
Translates to: AVQTTLTLIKAIRWLNLIYSSHS*GRCYGK
Trigger: CTTCCCATAGCATCGGCCTCAACTGTGTGACGAATA...GATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp CTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAAAATCACACTCATCCTCTTaGTGGATTCAGCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LFTNQPTNPTKHISELTKSHSSS*WIQQGS
Trigger: GGAGCCCTGCTGAATCCATCAAGAGGATGAGTGTGA...TTTTGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR TCA 90 bp AGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCATCACACTCATCCTCTTaGTGGATTCAGCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: SSDHFNTDKSNSVAELDPSHSSS*WIQQGS
Trigger: GGAGCCCTGCTGAATCCATCAAGAGGATGAGTGTGA...TGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp TGTTTGTGGCAGACAGAATCCAAAATGGCTAATTTCCTAATCCCGATGCTCTGTCGTCCCGGAATTCAATaGCACCTTCTCCAAGCAATG +
Preference number: 4 (lower is better)
Translates to: CLWQTESKMANFLIPMLCRPGIQ*HLLQAM
Trigger: CATTGCTTGGAGAAGGTGTCATTGAATTCCGGGACG...ACAGAGCATCGGGATTAGGAAATTAGCCATTTTGGATTCTGTCTGCCACAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR TCA 90 bp AGTGGCATGAAGGGGAGTGCATACAAAAACACACAATGCCAGAAGTGCTTGAAGGCCCTACATTCACACTaGCAGTATGTAGTGCTCATT +
Preference number: 4 (lower is better)
Translates to: SGMKGSAYKNTQCQKCLKALHSH*QYVVLI
Trigger: AATGAGCACTACATACTGTCAGTGTGAATGTAGGGC...CTTCAAGCACTTCTGGCATTGTGTGTTTTTGTATGCACTCCCCTTCATGCCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR GCA 90 bp CCAAAACATTCTTTTGCCCAGCCAATCTACTTGAAGAGTGGCTCTGTGATATACAATCAGCTGCACTGGTaGCTGTTTCCTCATCCACCT +
Preference number: 4 (lower is better)
Translates to: PKHSFAQPIYLKSGSVIYNQLHW*LFPHPP
Trigger: AGGTGGATGAGGAAACAGGCACCAGTGCAGCTGATT...GTATATCACAGAGCCACTCTTCAAGTAGATTGGCTGGGCAAAAGAATGTTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295900.10
CDS-3UTR GCA 90 bp TATCTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAGGAGGTCAAATCAGCTaGACTGGTGCCTGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: YLFTNQPTNPTKHISELTGGQIS*TGACFL
Trigger: GAGGAAACAGGCACCAGTGCAGCTGATTTGACCTCC...TGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR GCA 90 bp TTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAAAAGATCGGCCAAAGGCGGCTTaGTGGATGAGCTATGTCTTC +
Preference number: 4 (lower is better)
Translates to: FTNQPTNPTKHISELTKDRPKAA*WMSYVF
Trigger: GAAGACATAGCTCATCCAGCAAGCCGCCTTTGGCCG...ATCTTTTGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR GCA 90 bp GGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCCTGGAACATCGGCCAAAGGCGGCTTaGTGGATGAGCTATGTCTTC +
Preference number: 4 (lower is better)
Translates to: GYFVMVSWANIYISFLEHRPKAA*WMSYVF
Trigger: GAAGACATAGCTCATCCAGCAAGCCGCCTTTGGCCG...ATGTTCCAGGAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp TCAAAAGGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATCGGCCAAAGGCGGCTTaGTGGATGAGCTATGTCTTC +
Preference number: 4 (lower is better)
Translates to: SKGWAILSWCLGLTSIFHRPKAA*WMSYVF
Trigger: GAAGACATAGCTCATCCAGCAAGCCGCCTTTGGCCG...ATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCTTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp TATCTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACACACTGGAAGAACGGTTaGTTCCACTTGCACTGCCTC +
Preference number: 4 (lower is better)
Translates to: YLFTNQPTNPTKHISELTHWKNG*FHLHCL
Trigger: GAGGCAGTGCAAGTGGAAGCAACCGTTCTTCCAGTG...TGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR GCA 90 bp CCAAAACATTCTTTTGCCCAGCCAATCTACTTGAAGAGTGGCTCTGTGATATACGTGTTCCCCCTGAGCTaGAGTTTCTCTTTGGGTGAT +
Preference number: 4 (lower is better)
Translates to: PKHSFAQPIYLKSGSVIYVFPLS*SFSLGD
Trigger: ATCACCCAAAGAGAAACTGCAGCTCAGGGGGAACAC...GTATATCACAGAGCCACTCTTCAAGTAGATTGGCTGGGCAAAAGAATGTTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp TTGGTAGCAAGCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGTGTTCCCCCTGAGCTaGAGTTTCTCTTTGGGTGAT +
Preference number: 4 (lower is better)
Translates to: LVASSSDHFNTDKSNSVAVFPLS*SFSLGD
Trigger: ATCACCCAAAGAGAAACTGCAGCTCAGGGGGAACAC...AGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGCTTGCTACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp ACAAAAACTTCTCACAGATTGGTAGCAAGCAGTTCAGACCACTTTAACACTGATTTCCAGAGTGGGCGGTaGAGGAAGCCCTTTGCCATT +
Preference number: 4 (lower is better)
Translates to: TKTSHRLVASSSDHFNTDFQSGR*RKPFAI
Trigger: AATGGCAAAGGGCTTCCTGCACCGCCCACTCTGGAA...ATCAGTGTTAAAGTGGTCTGAACTGCTTGCTACCAATCTGTGAGAAGTTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp TATCTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAATGTCAAAGACCGGGTaGAGGGCTTCTTGGTGTCGA +
Preference number: 4 (lower is better)
Translates to: YLFTNQPTNPTKHISELTMSKTG*RASWCR
Trigger: TCGACACCAAGAAGCCCTGCACCCGGTCTTTGACAT...TGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR GCA 90 bp CTGGAACATTGCTATCAAAATCTAAAGCCTAATTCCCTTCTTCAGAGGGTTGCTATGTCAAAGACCGGGTaGAGGGCTTCTTGGTGTCGA +
Preference number: 4 (lower is better)
Translates to: LEHCYQNLKPNSLLQRVAMSKTG*RASWCR
Trigger: TCGACACCAAGAAGCCCTGCACCCGGTCTTTGACAT...AGCAACCCTCTGAAGAAGGGAATTAGGCTTTAGATTTTGATAGCAATGTTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp AAAAGGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCTACCCTGGACAGCCCTaGGCTGGGTTAAGGAATGTG +
Preference number: 4 (lower is better)
Translates to: KRLGYFVMVSWANIYISFYPGQP*AGLRNV
Trigger: CACATTCCTTAACCCAGCGCAGGGCTGTCCAGGGTA...GAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp CATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTAAATGTGCAAAAAGATaGTGGCTGAGGATGATGACC +
Preference number: 4 (lower is better)
Translates to: HSFREILVKTTARQVSTLKCAKR*WLRMMT
Trigger: GGTCATCATCCTCAGCCAGCATCTTTTTGCACATTT...AAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp AACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTCCTTTATGAGTGCCGGCTCCCAAATGTaGAAAAAGATGCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: NTDKSNSVAELDPVSFMSAGSQM*KKMLAE
Trigger: CTCAGCCAGCATCTTTTTGCACATTTGGGAGCCGGC...ACTCATAAAGGACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp ACATTCTTTTGCCCAGCCAATCTACTTGAAGAGTGGCTCTGTGATATACTGCAAAGCCGCCACTGGTACTaGTACTGGCATTTTGACAGT +
Preference number: 4 (lower is better)
Translates to: TFFCPANLLEEWLCDILQSRHWY*YWHFDS
Trigger: ACTGTCAAAATGCCAGTAGCAGTACCAGTGGCGGCT...TTGCAGTATATCACAGAGCCACTCTTCAAGTAGATTGGCTGGGCAAAAGAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp GCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCGTGGGGAACTGTTTTTaGGTTTCTTTCCTGAGCCGC +
Preference number: 4 (lower is better)
Translates to: AVQTTLTLIKAIRWLNLIVGNCF*VSFLSR
Trigger: GCGGCTCAGGAAAGAAACGCAAAAACAGTTCCCCAC...GATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp ACATTCTTTTGCCCAGCCAATCTACTTGAAGAGTGGCTCTGTGATATACTGCAAGTGGGGAACTGTTTTTaGGTTTCTTTCCTGAGCCGC +
Preference number: 4 (lower is better)
Translates to: TFFCPANLLEEWLCDILQVGNCF*VSFLSR
Trigger: GCGGCTCAGGAAAGAAACGCAAAAACAGTTCCCCAC...TTGCAGTATATCACAGAGCCACTCTTCAAGTAGATTGGCTGGGCAAAAGAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp AAAAGGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCGTTCATCAGTCCTTGTaGCCCTGGGATGGTGCCTGT +
Preference number: 4 (lower is better)
Translates to: KRLGYFVMVSWANIYISFVHQSL*PWDGAC
Trigger: ACAGGCACCATCCCAGGGGCACAAGGACTGATGAAC...GAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp CATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACACATTGTTCATCAGTCCTTGTaGCCCTGGGATGGTGCCTGT +
Preference number: 4 (lower is better)
Translates to: HEAEYLFTNQPTNPTKHIVHQSL*PWDGAC
Trigger: ACAGGCACCATCCCAGGGGCACAAGGACTGATGAAC...AATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR GCA 90 bp GGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCCTGGCATTATTCCTCCCCGTaGTATTTTCAGCTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: GWAILSWCLGLTSIFHSWHYSSP*YFQLSG
Trigger: CCCTGACAGCTGAAAATAGCACGGGGAGGAATAATG...CCAGGAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp GGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCCTGGGTTAAGGTGCCTAACTaGTGGAGAGTGACCTACAGA +
Preference number: 4 (lower is better)
Translates to: GWAILSWCLGLTSIFHSWVKVPN*WRVTYR
Trigger: TCTGTAGGTCACTCTCCAGCAGTTAGGCACCTTAAC...CCAGGAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp GTACTCACTGCTAGAGACATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCTTTGGAGAGGCGTCTTaGTACCTTCCATTCACAGAA +
Preference number: 4 (lower is better)
Translates to: VLTARDIASGKSSLKQQPFGEAS*YLPFTE
Trigger: TTCTGTGAATGGAAGGTAGCAAGACGCCTCTCCAAA...GGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATGTCTCTAGCAGTGAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484332.1
CDS-3UTR CCA 90 bp CATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGTGATTTCAACAACTTaGAACTTGATGAGGATGCGC +
Preference number: 4 (lower is better)
Translates to: HSFREILVKTTARQVSTLVISTT*NLMRMR
Trigger: GCGCATCCTCATCAAGTTCCAAGTTGTTGAAATCAC...AAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp GGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCCTGGAACATAGTAGCAGGACAGGTTaGCCCCACCGCAGATTTCAG +
Preference number: 4 (lower is better)
Translates to: GYFVMVSWANIYISFLEHSSRTG*PHRRFQ
Trigger: CTGAAATCTGCGGTGGGGCCAACCTGTCCTGCTACT...ATGTTCCAGGAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp ACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACACAGGGTGTGGAGATTCATaGACTGGAGGAGGGTCAATG +
Preference number: 4 (lower is better)
Translates to: TMKLNICLQTNQPTQPNTGCGDS*TGGGSM
Trigger: CATTGACCCTCCTCCAGTCCATGAATCTCCACACCC...TGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CCA 90 bp AGACACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAATGGGTGAGGTGGTACTaGGCACTGGTGGGATTTTCT +
Preference number: 4 (lower is better)
Translates to: RHHEAEYLFTNQPTNPTKWVRWY*ALVGFS
Trigger: AGAAAATCCCACCAGTGCCCAGTACCACCTCACCCA...TTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CCA 90 bp TATCTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAGAATACGTGTGGAGATaGGTGAGGTGGTACTGGGCA +
Preference number: 4 (lower is better)
Translates to: YLFTNQPTNPTKHISELTEYVWR*VRWYWA
Trigger: TGCCCAGTACCACCTCACCCATCTCCACACGTATTC...TGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CCA 90 bp AACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTCCTTTATGAGTGAATACGTGTGGAGATaGGTGAGGTGGTACTGGGCA +
Preference number: 4 (lower is better)
Translates to: NTDKSNSVAELDPVSFMSEYVWR*VRWYWA
Trigger: TGCCCAGTACCACCTCACCCATCTCCACACGTATTC...ACTCATAAAGGACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp AGACACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAAGGTGAGGAATACGTGTaGAGATGGGTGAGGTGGTAC +
Preference number: 4 (lower is better)
Translates to: RHHEAEYLFTNQPTNPTKGEEYV*RWVRWY
Trigger: GTACCACCTCACCCATCTCCACACGTATTCCTCACC...TTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CCA 90 bp GTACTCACTGCTAGAGACATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCTGTGGTTCCATGAGCTaGTACCGATTTGCTATTTGG +
Preference number: 4 (lower is better)
Translates to: VLTARDIASGKSSLKQQPCGSMS*YRFAIW
Trigger: CCAAATAGCAAATCGGTACCAGCTCATGGAACCACA...GGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATGTCTCTAGCAGTGAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp GACACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACTTCCTGAGCCGCCACTaGTACTGCTACTGGCATTTT +
Preference number: 4 (lower is better)
Translates to: DTMKLNICLQTNQPTQPNFLSRH*YCYWHF
Trigger: AAAATGCCAGTAGCAGTACCAGTGGCGGCTCAGGAA...GTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CCA 90 bp AGACACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAAAGAGGAGTGTGTGAGTaGGAAAAACTGCCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: RHHEAEYLFTNQPTNPTKRGVCE*EKLPWE
Trigger: CTCCCACGGCAGTTTTTCCCACTCACACACTCCTCT...TTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGTGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CCA 90 bp ACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTCCTTTATGAGTACTAGAGGAGTGTGTGAGTaGGAAAAACTGCCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: TDKSNSVAELDPVSFMSTRGVCE*EKLPWE
Trigger: CTCCCACGGCAGTTTTTCCCACTCACACACTCCTCT...AGTACTCATAAAGGACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp AGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCATCACGGCTGGCACTTTaGCAACCTTTGTGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: SSDHFNTDKSNSVAELDPSRLAL*QPLWVC
Trigger: GCAAACCCACAAAGGTTGCCAAAGTGCCAGCCGTGA...TGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp AATAAACATCTGAAGTGGCATGAAGGGGAGTGCATACAAAAACACACAATGCCACTTGTGCCCCTGGGATaGTGCCTGTGTGTTTCATGT +
Preference number: 4 (lower is better)
Translates to: NKHLKWHEGECIQKHTMPLVPLG*CLCVSC
Trigger: ACATGAAACACACAGGCACCATCCCAGGGGCACAAG...TGGCATTGTGTGTTTTTGTATGCACTCCCCTTCATGCCACTTCAGATGTTTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CCA 90 bp CTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAAAACTTGTGCCCCTGGGATaGTGCCTGTGTGTTTCATGT +
Preference number: 4 (lower is better)
Translates to: LFTNQPTNPTKHISELTKLVPLG*CLCVSC
Trigger: ACATGAAACACACAGGCACCATCCCAGGGGCACAAG...TTTTGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CCA 90 bp AAAAGGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCCAGTCCTTGTGCCCCTaGGATGGTGCCTGTGTGTTT +
Preference number: 4 (lower is better)
Translates to: KRLGYFVMVSWANIYISFQSLCP*DGACVF
Trigger: AAACACACAGGCACCATCCCAGGGGCACAAGGACTG...GAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp AACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTCCTTTATGAGTTCAGGGACGTGCCTTTaGCTGATGAAGGAGGGAACT +
Preference number: 4 (lower is better)
Translates to: NTDKSNSVAELDPVSFMSSGTCL*LMKEGT
Trigger: AGTTCCCTCCTTCATCAGCCAAAGGCACGTCCCTGA...ACTCATAAAGGACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp CTCACTGCTAGAGACATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCGGCAATAAACATCTGAAGTaGCATGAAGGGGAGTGCATA +
Preference number: 4 (lower is better)
Translates to: LTARDIASGKSSLKQQPGNKHLK*HEGECI
Trigger: TATGCACTCCCCTTCATGCCACTTCAGATGTTTATT...GCCGGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATGTCTCTAGCAGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CCA 90 bp CAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTAAAGAATGTACTGACTaGCTCTCATCAGGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: QTTLTLIKAIRWLNLIQCKECTD*LSSGPG
Trigger: GCCAGGGCCTGATGAGAGCCAGTCAGTACATTCTTT...ACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CCA 90 bp GCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCTCTCTCTTCCCCGACTaGGATGGAAACCAGACTGAT +
Preference number: 4 (lower is better)
Translates to: AVQTTLTLIKAIRWLNLISLFPD*DGNQTD
Trigger: ATCAGTCTGGTTTCCATCCCAGTCGGGGAAGAGAGA...GATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR TCA 90 bp GAAAGGAGGGTGTGTGTCAGGGCAATCCTATACATGCATCACAAAAGACCTTCACATCTGCTGCAATTGTaGAAGCTCGTTCGTCTTAAT +
Preference number: 4 (lower is better)
Translates to: ERRVCVRAILYMHHKRPSHLLQL*KLVRLN
Trigger: ATTAAGACGAACGAGCTTTCACAATTGCAGCAGATG...TGAAGGTCTTTTGTGATGCATGTATAGGATTGCCCTGACACACACCCTCCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR TCA 90 bp ACGATCAGCGCCTTGGAAATTTTACCCTGTGTTCGGCAACTTCGTGTGTTCTTCGTAGGCCAAAAATCCTaGTCAATTTACCAATGGATC +
Preference number: 4 (lower is better)
Translates to: TISALEILPCVRQLRVFFVGQKS*SIYQWI
Trigger: GATCCATTGGTAAATTGATCAGGATTTTTGGCCTAC...GAAGAACACACGAAGTTGCCGAACACAGGGTAAAATTTCCAAGGCGCTGATCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR TCA 90 bp ACATTCTTTTGCCCAGCCAATCTACTTGAAGAGTGGCTCTGTGATATACTGCAATGCGGTTTGACAACCTaGTTACAGTCGTTACACACC +
Preference number: 4 (lower is better)
Translates to: TFFCPANLLEEWLCDILQCGLTT*LQSLHT
Trigger: GGTGTGTAACGACTGTAATCAGGTTGTCAAACCGCA...TTGCAGTATATCACAGAGCCACTCTTCAAGTAGATTGGCTGGGCAAAAGAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp CATTGCTATCAAAATCTAAAGCCTAATTCCCTTCTTCAGAGGGTTGCTCGGGATTGCGGTTTGACAACCTaGTTACAGTCGTTACACACC +
Preference number: 4 (lower is better)
Translates to: HCYQNLKPNSLLQRVARDCGLTT*LQSLHT
Trigger: GGTGTGTAACGACTGTAATCAGGTTGTCAAACCGCA...ATCCCGAGCAACCCTCTGAAGAAGGGAATTAGGCTTTAGATTTTGATAGCAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp CTCCAAAATGATTTATACTTGCTGTCTGGGCATCAAAAATTTCAAACCAGTTTGGCCTGGTGTTCCCCCTaGGCTGCAGTTTCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: LQNDLYLLSGHQKFQTSLAWCSP*AAVSLW
Trigger: CCAAAGAGAAACTGCAGCTCAGGGGGAACACCAGGC...CAAACTGGTTTGAAATTTTTGATGCCCAGACAGCAAGTATAAATCATTTTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp ACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTCCTTTATGAGTACTGGAAGACTGGGGGTGTaGGGTTTAGGTTTACTAGCT +
Preference number: 4 (lower is better)
Translates to: TDKSNSVAELDPVSFMSTGRLGV*GLGLLA
Trigger: AGCTAGTAAACCTAAACCTCACACCCCCAGTCTTCC...AGTACTCATAAAGGACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp TATCTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAGGAAGACTGGGGGTGTaGGGTTTAGGTTTACTAGCT +
Preference number: 4 (lower is better)
Translates to: YLFTNQPTNPTKHISELTGRLGV*GLGLLA
Trigger: AGCTAGTAAACCTAAACCTCACACCCCCAGTCTTCC...TGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR TCA 90 bp GTACTCACTGCTAGAGACATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCCTGAGGATGATGACCTaGATAATGACAGTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: VLTARDIASGKSSLKQQPLRMMT*IMTVQF
Trigger: AAACTGGACTGTCATTATTCAGGTCATCATCCTCAG...GGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATGTCTCTAGCAGTGAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp ACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACACAACAGAGTTTGTCCGGTaGGGAATACGTGTGGAGATG +
Preference number: 4 (lower is better)
Translates to: TMKLNICLQTNQPTQPNTTEFVR*GIRVEM
Trigger: CATCTCCACACGTATTCCTCACCGGACAAACTCTGT...TGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR TCA 90 bp ACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTCCTTTATGAGTACTGCTGACTCCACATTGTaGTGTCGGCACAGAGTTTGT +
Preference number: 4 (lower is better)
Translates to: TDKSNSVAELDPVSFMSTADSTL*CRHRVC
Trigger: ACAAACTCTGTGCCGACATCACAATGTGGAGTCAGC...AGTACTCATAAAGGACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp ACAAAAACTTCTCACAGATTGGTAGCAAGCAGTTCAGACCACTTTAACACTGATCTGCTGCCAGATAGCTaGCTCCACATTGTGATGTCG +
Preference number: 4 (lower is better)
Translates to: TKTSHRLVASSSDHFNTDLLPDS*LHIVMS
Trigger: CGACATCACAATGTGGAGTCAGCTATCTGGCAGCAG...ATCAGTGTTAAAGTGGTCTGAACTGCTTGCTACCAATCTGTGAGAAGTTTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp TTGGTAGCAAGCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTCTGGATTTCAATTTCTaGGGTTTCCTGGACATGGGG +
Preference number: 4 (lower is better)
Translates to: LVASSSDHFNTDKSNSVALDFNF*GFLDMG
Trigger: CCCCATGTCCAGGAAACCTCAGAAATTGAAATCCAG...AGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGCTTGCTACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp ACAAAAACTTCTCACAGATTGGTAGCAAGCAGTTCAGACCACTTTAACACTGATAACTGCCGTGGGAGTTaGCAGGCAGTTCATTGGACT +
Preference number: 4 (lower is better)
Translates to: TKTSHRLVASSSDHFNTDNCRGS*QAVHWT
Trigger: AGTCCAATGAACTGCCTGTCAACTCCCACGGCAGTT...ATCAGTGTTAAAGTGGTCTGAACTGCTTGCTACCAATCTGTGAGAAGTTTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp ACATTCTTTTGCCCAGCCAATCTACTTGAAGAGTGGCTCTGTGATATACTGCAACTAACTGCTGGAGAGTaGCCTACAGATGACAGTGTT +
Preference number: 4 (lower is better)
Translates to: TFFCPANLLEEWLCDILQLTAGE*PTDDSV
Trigger: AACACTGTCATCTGTAGGTCACTCTCCAGCAGTTAG...TTGCAGTATATCACAGAGCCACTCTTCAAGTAGATTGGCTGGGCAAAAGAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp TCAGCGCCTTGGAAATTTTACCCTGTGTTCGGCAACTTCGTGTGTTCTTCTAAGCCTGAAACTGAAGTTTaGAACCCAAGAACTGTAGGA +
Preference number: 4 (lower is better)
Translates to: SAPWKFYPVFGNFVCSSKPETEV*NPRTVG
Trigger: TCCTACAGTTCTTGGGTTTCAAACTTCAGTTTCAGG...CTTAGAAGAACACACGAAGTTGCCGAACACAGGGTAAAATTTCCAAGGCGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR TCA 90 bp GTAGCAAGCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAAACCCCCTGGACAGAATaGGCGACATTAAGAAATTCC +
Preference number: 4 (lower is better)
Translates to: VASSSDHFNTDKSNSVAETPWTE*ATLRNS
Trigger: GGAATTTCTTAATGTCGCTCATTCTGTCCAGGGGGT...TTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGCTTGCTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR TCA 90 bp AGTGGCATGAAGGGGAGTGCATACAAAAACACACAATGCCAGAAGTGCTTGAAGAACACAAAGTCCAGCTaGGATGCTCTTGATTATGTG +
Preference number: 4 (lower is better)
Translates to: SGMKGSAYKNTQCQKCLKNTKSS*DALDYV
Trigger: CACATAATCAAGAGCATCTCAGCTGGACTTTGTGTT...CTTCAAGCACTTCTGGCATTGTGTGTTTTTGTATGCACTCCCCTTCATGCCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR GCA 90 bp ACAAAAACAAAAACTTCTCACAGATTGGTAGCAAGCAGTTCAGACCACTTTAACCGGCCAAAGGCGGCTTaGTGGATGAGCTATGTCTTC +
Preference number: 4 (lower is better)
Translates to: TKTKTSHRLVASSSDHFNRPKAA*WMSYVF
Trigger: GAAGACATAGCTCATCCAGCAAGCCGCCTTTGGCCG...GTTAAAGTGGTCTGAACTGCTTGCTACCAATCTGTGAGAAGTTTTTGTTTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp CCAAAACATTCTTTTGCCCAGCCAATCTACTTGAAGAGTGGCTCTGTGATATACTGCTTCCACTTGCACTaGCTCCTTTGCTTTTGGACA +
Preference number: 4 (lower is better)
Translates to: PKHSFAQPIYLKSGSVIYCFHLH*LLCFWT
Trigger: TGTCCAAAAGCAAAGGAGGCAGTGCAAGTGGAAGCA...GTATATCACAGAGCCACTCTTCAAGTAGATTGGCTGGGCAAAAGAATGTTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp TATCTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAGTGTTCCCCCTGAGCTaGAGTTTCTCTTTGGGTGAT +
Preference number: 4 (lower is better)
Translates to: YLFTNQPTNPTKHISELTVFPLS*SFSLGD
Trigger: ATCACCCAAAGAGAAACTGCAGCTCAGGGGGAACAC...TGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR GCA 90 bp ACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTCCTTTATGAGTACTGTGCAGGAAGCCCTTTaGCATTCAGAATCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: TDKSNSVAELDPVSFMSTVQEAL*HSESVQ
Trigger: CTGGACAGATTCTGAATGGCAAAGGGCTTCCTGCAC...AGTACTCATAAAGGACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp ACAAAAACTTCTCACAGATTGGTAGCAAGCAGTTCAGACCACTTTAACACTGATATGTCAAAGACCGGGTaGAGGGCTTCTTGGTGTCGA +
Preference number: 4 (lower is better)
Translates to: TKTSHRLVASSSDHFNTDMSKTG*RASWCR
Trigger: TCGACACCAAGAAGCCCTGCACCCGGTCTTTGACAT...ATCAGTGTTAAAGTGGTCTGAACTGCTTGCTACCAATCTGTGAGAAGTTTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp CATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACACATTGCCGGCTCCCAAATGTaGAAAAAGATGCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: HEAEYLFTNQPTNPTKHIAGSQM*KKMLAE
Trigger: CTCAGCCAGCATCTTTTTGCACATTTGGGAGCCGGC...AATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR GCA 90 bp AAAAGGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCGCCGGCTCCCAAATGTaGAAAAAGATGCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: KRLGYFVMVSWANIYISFAGSQM*KKMLAE
Trigger: CTCAGCCAGCATCTTTTTGCACATTTGGGAGCCGGC...GAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp CATTGCTATCAAAATCTAAAGCCTAATTCCCTTCTTCAGAGGGTTGCTCGGGATAGCTGTGCATTCAGATaGTTCTCCACCATGAGGTTG +
Preference number: 4 (lower is better)
Translates to: HCYQNLKPNSLLQRVARDSCAFR*FSTMRL
Trigger: CAACCTCATGGTGGAGAAGCATCTGAATGCACAGCT...ATCCCGAGCAACCCTCTGAAGAAGGGAATTAGGCTTTAGATTTTGATAGCAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp AGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGAGCTGGTACCGATTTaGTATTTGGGGAGATGCAGG +
Preference number: 4 (lower is better)
Translates to: SSDHFNTDKSNSVAELDPELVPI*YLGRCR
Trigger: CCTGCATCTCCCCAAATAGCAAATCGGTACCAGCTC...TGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp AGACACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAAGAGCTGGTACCGATTTaGTATTTGGGGAGATGCAGG +
Preference number: 4 (lower is better)
Translates to: RHHEAEYLFTNQPTNPTKELVPI*YLGRCR
Trigger: CCTGCATCTCCCCAAATAGCAAATCGGTACCAGCTC...TTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR GCA 90 bp AAAAGGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCGTCTGGATTGCATACTaGACACAGGATCCATCGCCC +
Preference number: 4 (lower is better)
Translates to: KRLGYFVMVSWANIYISFVWIAY*TQDPSP
Trigger: GGGCGATGGATCCTGTGTGCAGTATGCAATCCAGAC...GAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp CATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACACATTGTCTGGATTGCATACTaGACACAGGATCCATCGCCC +
Preference number: 4 (lower is better)
Translates to: HEAEYLFTNQPTNPTKHIVWIAY*TQDPSP
Trigger: GGGCGATGGATCCTGTGTGCAGTATGCAATCCAGAC...AATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR GCA 90 bp ACATTCTTTTGCCCAGCCAATCTACTTGAAGAGTGGCTCTGTGATATACTGCAAGACACTTGTCTGGATTaGATACTGCACACAGGATCC +
Preference number: 4 (lower is better)
Translates to: TFFCPANLLEEWLCDILQDTCLD*ILHTGS
Trigger: GGATCCTGTGTGCAGTATGCAATCCAGACAAGTGTC...TTGCAGTATATCACAGAGCCACTCTTCAAGTAGATTGGCTGGGCAAAAGAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp ACGATCAGCGCCTTGGAAATTTTACCCTGTGTTCGGCAACTTCGTGTGTTCTTCTGGGCCTCAAAGATTTaGTGGATTTCAATTTCTGAG +
Preference number: 4 (lower is better)
Translates to: TISALEILPCVRQLRVFFWASKI*WISISE
Trigger: CTCAGAAATTGAAATCCAGCAAATCTTTGAGGCCCA...GAAGAACACACGAAGTTGCCGAACACAGGGTAAAATTTCCAAGGCGCTGATCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR GCA 90 bp ACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACACAAGCCGCCACTGGTACTaGTACTGGCATTTTGACAGT +
Preference number: 4 (lower is better)
Translates to: TMKLNICLQTNQPTQPNTSRHWY*YWHFDS
Trigger: ACTGTCAAAATGCCAGTAGCAGTACCAGTGGCGGCT...TGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR GCA 90 bp AATAAACATCTGAAGTGGCATGAAGGGGAGTGCATACAAAAACACACAATGCCAGTGGGGAACTGTTTTTaGGTTTCTTTCCTGAGCCGC +
Preference number: 4 (lower is better)
Translates to: NKHLKWHEGECIQKHTMPVGNCF*VSFLSR
Trigger: GCGGCTCAGGAAAGAAACGCAAAAACAGTTCCCCAC...TGGCATTGTGTGTTTTTGTATGCACTCCCCTTCATGCCACTTCAGATGTTTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR GCA 90 bp TATCTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAGTGGGGAACTGTTTTTaGGTTTCTTTCCTGAGCCGC +
Preference number: 4 (lower is better)
Translates to: YLFTNQPTNPTKHISELTVGNCF*VSFLSR
Trigger: GCGGCTCAGGAAAGAAACGCAAAAACAGTTCCCCAC...TGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR GCA 90 bp ACTTGTTATTGTGGATCCTATTCACATCTTTCGGAACAACATGATCGATCTGTAGTGCCCCTGGGATGGTaGCTGTGTGTTTCATGTGGA +
Preference number: 4 (lower is better)
Translates to: TCYCGSYSHLSEQHDRSVVPLGW*LCVSCG
Trigger: TCCACATGAAACACACAGGCACCATCCCAGGGGCAC...TACAGATCGATCATGTTGTTCCGAAAGATGTGAATAGGATCCACAATAACAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR GCA 90 bp ACATTCTTTTGCCCAGCCAATCTACTTGAAGAGTGGCTCTGTGATATACTGCAACATTATTCCTCCCCGTaGTATTTTCAGCTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: TFFCPANLLEEWLCDILQHYSSP*YFQLSG
Trigger: CCCTGACAGCTGAAAATAGCACGGGGAGGAATAATG...TTGCAGTATATCACAGAGCCACTCTTCAAGTAGATTGGCTGGGCAAAAGAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp GCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCATTATTCCTCCCCGTaGTATTTTCAGCTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: AVQTTLTLIKAIRWLNLIHYSSP*YFQLSG
Trigger: CCCTGACAGCTGAAAATAGCACGGGGAGGAATAATG...GATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp CTCACTGCTAGAGACATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCGGCACAACCAACCCAATCTaGCATACTGTTTACTATGAA +
Preference number: 4 (lower is better)
Translates to: LTARDIASGKSSLKQQPGTTNPI*HTVYYE
Trigger: TTCATAGTAAACAGTATGGCAGATTGGGTTGGTTGT...GCCGGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATGTCTCTAGCAGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR GCA 90 bp GTAGCAAGCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAAGATTTCTCCCAACTATaGCAAACTGGCCCATCCATG +
Preference number: 4 (lower is better)
Translates to: VASSSDHFNTDKSNSVAEDFSQL*QTGPSM
Trigger: CATGGATGGGCCAGTTTGGCATAGTTGGGAGAAATC...TTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGCTTGCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR GCA 90 bp CTCACTGCTAGAGACATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCGGCAAACAACCCAACCACTaGAAATTTGGTTTTTGCAAG +
Preference number: 4 (lower is better)
Translates to: LTARDIASGKSSLKQQPGKQPNH*KFGFCK
Trigger: CTTGCAAAAACCAAATTTGCAGTGGTTGGGTTGTTT...GCCGGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATGTCTCTAGCAGTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CCA 90 bp CATTGCTATCAAAATCTAAAGCCTAATTCCCTTCTTCAGAGGGTTGCTCGGGATCCAAAGGCGGCTTGCTaGATGAGCTATGTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: HCYQNLKPNSLLQRVARDPKAAC*MSYVFF
Trigger: AAAGAAGACATAGCTCATCCAGCAAGCCGCCTTTGG...ATCCCGAGCAACCCTCTGAAGAAGGGAATTAGGCTTTAGATTTTGATAGCAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp CAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTCCAAAGGCGGCTTGCTaGATGAGCTATGTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: QTTLTLIKAIRWLNLIQCPKAAC*MSYVFF
Trigger: AAAGAAGACATAGCTCATCCAGCAAGCCGCCTTTGG...ACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp TATCTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAAGGAAAATACTGAAGTaGGAGGAACGGCCAAAGGCG +
Preference number: 4 (lower is better)
Translates to: YLFTNQPTNPTKHISELTRKILK*EERPKA
Trigger: CGCCTTTGGCCGTTCCTCCCACTTCAGTATTTTCCT...TGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CCA 90 bp GTAGCAAGCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAATGCCTCCTTTGCTTTTaGACAGAGAAGGGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: VASSSDHFNTDKSNSVAECLLCF*TEKGRR
Trigger: CCTTCTTCCCTTCTCTGTCCAAAAGCAAAGGAGGCA...TTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGCTTGCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp TCAGCGCCTTGGAAATTTTACCCTGTGTTCGGCAACTTCGTGTGTTCTTCTAAGGCTGCAGTTTCTCTTTaGGTGATTTCAACAACTTGG +
Preference number: 4 (lower is better)
Translates to: SAPWKFYPVFGNFVCSSKAAVSL*VISTTW
Trigger: CCAAGTTGTTGAAATCACCCAAAGAGAAACTGCAGC...CTTAGAAGAACACACGAAGTTGCCGAACACAGGGTAAAATTTCCAAGGCGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CCA 90 bp CTATCCCTTGACATTTGTTCATGTTCTATACAGCAGCCAACACAAAGTCCAGCTCTCTACTTTGCTGAATaGGATGCATTGGCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: LSLDICSCSIQQPTQSPALYFAE*DALAWC
Trigger: ACACCAGGCCAATGCATCCCATTCAGCAAAGTAGAG...AGCTGGACTTTGTGTTGGCTGCTGTATAGAACATGAACAAATGTCAAGGGATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CCA 90 bp TTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAAAAGATGTTTCTTTTCCAGAGTaGGCGGTGCAGGAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: FTNQPTNPTKHISELTKDVSFPE*AVQEAL
Trigger: AAGGGCTTCCTGCACCGCCCACTCTGGAAAAGAAAC...ATCTTTTGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CCA 90 bp AAAAGGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCTGGACAGCCCTGCGCTaGGTTAAGGAATGTGTCTTG +
Preference number: 4 (lower is better)
Translates to: KRLGYFVMVSWANIYISFWTALR*VKECVL
Trigger: CAAGACACATTCCTTAACCCAGCGCAGGGCTGTCCA...GAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp CATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTGGACAGCCCTGCGCTaGGTTAAGGAATGTGTCTTG +
Preference number: 4 (lower is better)
Translates to: HEAEYLFTNQPTNPTKHIWTALR*VKECVL
Trigger: CAAGACACATTCCTTAACCCAGCGCAGGGCTGTCCA...AATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CCA 90 bp ACAAAAACTTCTCACAGATTGGTAGCAAGCAGTTCAGACCACTTTAACACTGATGAATACGTGTGGAGATaGGTGAGGTGGTACTGGGCA +
Preference number: 4 (lower is better)
Translates to: TKTSHRLVASSSDHFNTDEYVWR*VRWYWA
Trigger: TGCCCAGTACCACCTCACCCATCTCCACACGTATTC...ATCAGTGTTAAAGTGGTCTGAACTGCTTGCTACCAATCTGTGAGAAGTTTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp TATCTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAGCTGTGCATTTAGTGTaGTTCCATGAGCTGGTACCG +
Preference number: 4 (lower is better)
Translates to: YLFTNQPTNPTKHISELTAVHLV*FHELVP
Trigger: CGGTACCAGCTCATGGAACCACACTAAATGCACAGC...TGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CCA 90 bp CAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTTTGAGGCCGATGCTATaGGAAGATGTTACCGTTGAG +
Preference number: 4 (lower is better)
Translates to: QTTLTLIKAIRWLNLIQCLRPML*EDVTVE
Trigger: CTCAACGGTAACATCTTCCCATAGCATCGGCCTCAA...ACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp AACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTCCTTTATGAGTTGGGAAAAACTGCCGTaGGAGTTGACAGGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: NTDKSNSVAELDPVSFMSWEKLP*ELTGSS
Trigger: TGAACTGCCTGTCAACTCCCACGGCAGTTTTTCCCA...ACTCATAAAGGACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp TCAAAAGGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATAGAGGAGTGTGTGAGTaGGAAAAACTGCCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: SKGWAILSWCLGLTSIFHRGVCE*EKLPWE
Trigger: CTCCCACGGCAGTTTTTCCCACTCACACACTCCTCT...ATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCTTTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp AGGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCCTGGACATTGTTCACGGCTaGCACTTTGGCAACCTTTGT +
Preference number: 4 (lower is better)
Translates to: RLGYFVMVSWANIYISFLDIVHG*HFGNLC
Trigger: ACAAAGGTTGCCAAAGTGCCAGCCGTGAACAATGTC...CAGGAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp TCAAAAGGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATCTTGTGCCCCTGGGATaGTGCCTGTGTGTTTCATGT +
Preference number: 4 (lower is better)
Translates to: SKGWAILSWCLGLTSIFHLVPLG*CLCVSC
Trigger: ACATGAAACACACAGGCACCATCCCAGGGGCACAAG...ATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCTTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp AGTGGCATGAAGGGGAGTGCATACAAAAACACACAATGCCAGAAGTGCTTGAAGTGGGCTATTTTGTCATaGTGTCTTGGGCTAACATCT +
Preference number: 4 (lower is better)
Translates to: SGMKGSAYKNTQCQKCLKWAILS*CLGLTS
Trigger: AGATGTTAGCCCAAGACACCATGACAAAATAGCCCA...CTTCAAGCACTTCTGGCATTGTGTGTTTTTGTATGCACTCCCCTTCATGCCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CCA 90 bp CATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTTTACTCTCAAAAGGCTaGGCTATTTTGTCATGGTGT +
Preference number: 4 (lower is better)
Translates to: HSFREILVKTTARQVSTLLLSKG*AILSWC
Trigger: ACACCATGACAAAATAGCCCAGCCTTTTGAGAGTAA...AAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp CATTGCTATCAAAATCTAAAGCCTAATTCCCTTCTTCAGAGGGTTGCTCGGGATAAGATCTGTAACCCTTaGTGCCACCAGGCAATCCAT +
Preference number: 4 (lower is better)
Translates to: HCYQNLKPNSLLQRVARDKICNP*CHQAIH
Trigger: ATGGATTGCCTGGTGGCACCAAGGGTTACAGATCTT...ATCCCGAGCAACCCTCTGAAGAAGGGAATTAGGCTTTAGATTTTGATAGCAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CCA 90 bp CAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTAAGATCTGTAACCCTTaGTGCCACCAGGCAATCCAT +
Preference number: 4 (lower is better)
Translates to: QTTLTLIKAIRWLNLIQCKICNP*CHQAIH
Trigger: ATGGATTGCCTGGTGGCACCAAGGGTTACAGATCTT...ACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CCA 90 bp CTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAAAAAAATGGGCATTCCCATaGGGCTCACAGTCCATTTCC +
Preference number: 4 (lower is better)
Translates to: LFTNQPTNPTKHISELTKKWAFP*GSQSIS
Trigger: GGAAATGGACTGTGAGCCCCATGGGAATGCCCATTT...TTTTGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAG
44% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000474112.5
3UTR CAA 72 bp GGGAGTGCATACAAAAACACACAATGCCAGAAGTGCTaGAAGCAGAAATCTACACTTAGTCCCAGGACAGTA +
Preference number: 4 (lower is better)
Translates to: GSAYKNTQCQKC*KQKSTLSPRTV
Trigger: TACTGTCCTGGGACTAAGTGTAGATTTCTGCTTCAAGCACTTCTGGCATTGTGTGTTTTTGTATGCACTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR TCA 90 bp ACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACACAGATCTGGGTTCAAAATaGGACACGATCCTGGTGCTA +
Preference number: 4 (lower is better)
Translates to: TMKLNICLQTNQPTQPNTDLGSK*DTILVL
Trigger: TAGCACCAGGATCGTGTCTCATTTTGAACCCAGATC...TGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR TCA 90 bp CTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAAAATGCGGTTTGACAACCTaGTTACAGTCGTTACACACC +
Preference number: 4 (lower is better)
Translates to: LFTNQPTNPTKHISELTKCGLTT*LQSLHT
Trigger: GGTGTGTAACGACTGTAATCAGGTTGTCAAACCGCA...TTTTGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR TCA 90 bp ACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTCCTTTATGAGTACTTGCGGTTTGACAACCTaGTTACAGTCGTTACACACC +
Preference number: 4 (lower is better)
Translates to: TDKSNSVAELDPVSFMSTCGLTT*LQSLHT
Trigger: GGTGTGTAACGACTGTAATCAGGTTGTCAAACCGCA...AGTACTCATAAAGGACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp ACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACACAGAAATGCCTGCGGTTTaGCAACCTGATTACAGTCGT +
Preference number: 4 (lower is better)
Translates to: TMKLNICLQTNQPTQPNTEMPAV*QPDYSR
Trigger: ACGACTGTAATCAGGTTGTCAAACCGCAGGCATTTC...TGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR TCA 90 bp TCCAGAGTGCTGAGTGGAGGTGTAACTTGTCCTCAAAAGTGTCCGCATTATTCCTCTTCTTTCATAATGTaGTTGAAATGCCTGCGGTTT +
Preference number: 4 (lower is better)
Translates to: SRVLSGGVTCPQKCPHYSSSFIM*LKCLRF
Trigger: AAACCGCAGGCATTTCAATCACATTATGAAAGAAGA...GGAATAATGCGGACACTTTTGAGGACAAGTTACACCTCCACTCAGCACTCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp GGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCCTGGAACATACAGAGTTTGTCCGGTaGGGAATACGTGTGGAGATG +
Preference number: 4 (lower is better)
Translates to: GYFVMVSWANIYISFLEHTEFVR*GIRVEM
Trigger: CATCTCCACACGTATTCCTCACCGGACAAACTCTGT...ATGTTCCAGGAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp TCAAAAGGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATACAGAGTTTGTCCGGTaGGGAATACGTGTGGAGATG +
Preference number: 4 (lower is better)
Translates to: SKGWAILSWCLGLTSIFHTEFVR*GIRVEM
Trigger: CATCTCCACACGTATTCCTCACCGGACAAACTCTGT...ATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCTTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp TTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAAAAGATGCTGACTCCACATTGTaGTGTCGGCACAGAGTTTGT +
Preference number: 4 (lower is better)
Translates to: FTNQPTNPTKHISELTKDADSTL*CRHRVC
Trigger: ACAAACTCTGTGCCGACATCACAATGTGGAGTCAGC...ATCTTTTGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR TCA 90 bp CTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAAAACTGGATTTCAATTTCTaGGGTTTCCTGGACATGGGG +
Preference number: 4 (lower is better)
Translates to: LFTNQPTNPTKHISELTKLDFNF*GFLDMG
Trigger: CCCCATGTCCAGGAAACCTCAGAAATTGAAATCCAG...TTTTGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR TCA 90 bp GACACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACCTGCTACTGGCATTTTaGCAGTTAGTGCTGTTACCA +
Preference number: 4 (lower is better)
Translates to: DTMKLNICLQTNQPTQPNLLLAF*QLVLLP
Trigger: TGGTAACAGCACTAACTGTCAAAATGCCAGTAGCAG...GTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR TCA 90 bp TTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAAAAGATTATTCGTCACACAGTTaGGGCCGATGCTATGGGAAG +
Preference number: 4 (lower is better)
Translates to: FTNQPTNPTKHISELTKDYSSHS*GRCYGK
Trigger: CTTCCCATAGCATCGGCCTCAACTGTGTGACGAATA...ATCTTTTGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR TCA 90 bp TCAGCGCCTTGGAAATTTTACCCTGTGTTCGGCAACTTCGTGTGTTCTTCTAAGAGTAAGCCTCCAAAATaGTTTATACTTGCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: SAPWKFYPVFGNFVCSSKSKPPK*FILAVW
Trigger: CCAGACAGCAAGTATAAATCATTTTGGAGGCTTACT...CTTAGAAGAACACACGAAGTTGCCGAACACAGGGTAAAATTTCCAAGGCGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR TCA 90 bp TCAAAAGGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATCGTCCCGGAATTCAATaGCACCTTCTCCAAGCAATG +
Preference number: 4 (lower is better)
Translates to: SKGWAILSWCLGLTSIFHRPGIQ*HLLQAM
Trigger: CATTGCTTGGAGAAGGTGTCATTGAATTCCGGGACG...ATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCTTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR TCA 90 bp GAAAGGAGGGTGTGTGTCAGGGCAATCCTATACATGCATCACAAAAGACCTTCATACCTGTTGTTGACTTaGAATTCCCTGAAACTGAAG +
Preference number: 4 (lower is better)
Translates to: ERRVCVRAILYMHHKRPSYLLLT*NSLKLK
Trigger: CTTCAGTTTCAGGGAATTTCAAGTCAACAACAGGTA...TGAAGGTCTTTTGTGATGCATGTATAGGATTGCCCTGACACACACCCTCCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR TCA 90 bp CAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTGCCCTACATTCACACTaGCAGTATGTAGTGCTCATT +
Preference number: 4 (lower is better)
Translates to: QTTLTLIKAIRWLNLIQCALHSH*QYVVLI
Trigger: AATGAGCACTACATACTGTCAGTGTGAATGTAGGGC...ACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR TCA 90 bp ACGATCAGCGCCTTGGAAATTTTACCCTGTGTTCGGCAACTTCGTGTGTTCTTCCAGCTGAGATGCTCTTaGTTATGTGTACAAATTATC +
Preference number: 4 (lower is better)
Translates to: TISALEILPCVRQLRVFFQLRCS*LCVQII
Trigger: GATAATTTGTACACATAATCAAGAGCATCTCAGCTG...GAAGAACACACGAAGTTGCCGAACACAGGGTAAAATTTCCAAGGCGCTGATCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR GCA 90 bp CTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAAAATTGCACTGCCTCCTTTaGTTTTGGACAGAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: LFTNQPTNPTKHISELTKLHCLL*FWTEKG
Trigger: TCCCTTCTCTGTCCAAAAGCAAAGGAGGCAGTGCAA...TTTTGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR GCA 90 bp AACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTCCTTTATGAGTTTGCACTGCCTCCTTTaGTTTTGGACAGAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: NTDKSNSVAELDPVSFMSLHCLL*FWTEKG
Trigger: TCCCTTCTCTGTCCAAAAGCAAAGGAGGCAGTGCAA...ACTCATAAAGGACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp CTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAAAATGCTTCCACTTGCACTaGCTCCTTTGCTTTTGGACA +
Preference number: 4 (lower is better)
Translates to: LFTNQPTNPTKHISELTKCFHLH*LLCFWT
Trigger: TGTCCAAAAGCAAAGGAGGCAGTGCAAGTGGAAGCA...TTTTGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR GCA 90 bp AATAAACATCTGAAGTGGCATGAAGGGGAGTGCATACAAAAACACACAATGCCAACGGTTGCTTCCACTTaGACTGCCTCCTTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: NKHLKWHEGECIQKHTMPTVAST*TASFAF
Trigger: AAAAGCAAAGGAGGCAGTGCAAGTGGAAGCAACCGT...TGGCATTGTGTGTTTTTGTATGCACTCCCCTTCATGCCACTTCAGATGTTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR GCA 90 bp TATCTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAACGGTTGCTTCCACTTaGACTGCCTCCTTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: YLFTNQPTNPTKHISELTTVAST*TASFAF
Trigger: AAAAGCAAAGGAGGCAGTGCAAGTGGAAGCAACCGT...TGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR GCA 90 bp ACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTCCTTTATGAGTACTACGGTTGCTTCCACTTaGACTGCCTCCTTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: TDKSNSVAELDPVSFMSTTVAST*TASFAF
Trigger: AAAAGCAAAGGAGGCAGTGCAAGTGGAAGCAACCGT...AGTACTCATAAAGGACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp ACAAAAACAAAAACTTCTCACAGATTGGTAGCAAGCAGTTCAGACCACTTTAACCACTGGAAGAACGGTTaGTTCCACTTGCACTGCCTC +
Preference number: 4 (lower is better)
Translates to: TKTKTSHRLVASSSDHFNHWKNG*FHLHCL
Trigger: GAGGCAGTGCAAGTGGAAGCAACCGTTCTTCCAGTG...GTTAAAGTGGTCTGAACTGCTTGCTACCAATCTGTGAGAAGTTTTTGTTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp TTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAAAAGATGTGCAGGAAGCCCTTTaGCATTCAGAATCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: FTNQPTNPTKHISELTKDVQEAL*HSESVQ
Trigger: CTGGACAGATTCTGAATGGCAAAGGGCTTCCTGCAC...ATCTTTTGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR GCA 90 bp CCAAAACATTCTTTTGCCCAGCCAATCTACTTGAAGAGTGGCTCTGTGATATACTTAAGGAATGTGTCTTaGATGTCAAAGACCGGGTGC +
Preference number: 4 (lower is better)
Translates to: PKHSFAQPIYLKSGSVIYLRNVS*MSKTGC
Trigger: GCACCCGGTCTTTGACATGCAAGACACATTCCTTAA...GTATATCACAGAGCCACTCTTCAAGTAGATTGGCTGGGCAAAAGAATGTTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp AGACACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAAAGCTGTGCATTCAGATaGTTCTCCACCATGAGGTTG +
Preference number: 4 (lower is better)
Translates to: RHHEAEYLFTNQPTNPTKSCAFR*FSTMRL
Trigger: CAACCTCATGGTGGAGAAGCATCTGAATGCACAGCT...TTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR GCA 90 bp ACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACACAGACACTTGTCTGGATTaGATACTGCACACAGGATCC +
Preference number: 4 (lower is better)
Translates to: TMKLNICLQTNQPTQPNTDTCLD*ILHTGS
Trigger: GGATCCTGTGTGCAGTATGCAATCCAGACAAGTGTC...TGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR GCA 90 bp ACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTCCTTTATGAGTACTGACACTTGTCTGGATTaGATACTGCACACAGGATCC +
Preference number: 4 (lower is better)
Translates to: TDKSNSVAELDPVSFMSTDTCLD*ILHTGS
Trigger: GGATCCTGTGTGCAGTATGCAATCCAGACAAGTGTC...AGTACTCATAAAGGACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp GTACTCACTGCTAGAGACATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCTGGGCCTCAAAGATTTaGTGGATTTCAATTTCTGAG +
Preference number: 4 (lower is better)
Translates to: VLTARDIASGKSSLKQQPWASKI*WISISE
Trigger: CTCAGAAATTGAAATCCAGCAAATCTTTGAGGCCCA...GGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATGTCTCTAGCAGTGAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp ACAAAAACTTCTCACAGATTGGTAGCAAGCAGTTCAGACCACTTTAACACTGATAGCCGCCACTGGTACTaGTACTGGCATTTTGACAGT +
Preference number: 4 (lower is better)
Translates to: TKTSHRLVASSSDHFNTDSRHWY*YWHFDS
Trigger: ACTGTCAAAATGCCAGTAGCAGTACCAGTGGCGGCT...ATCAGTGTTAAAGTGGTCTGAACTGCTTGCTACCAATCTGTGAGAAGTTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp GTAGCAAGCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAATCTTCTAAGCAACAGTaGCTGTTACTCGTGTCAGGA +
Preference number: 4 (lower is better)
Translates to: VASSSDHFNTDKSNSVAESSKQQ*LLLVSG
Trigger: TCCTGACACGAGTAACAGGCACTGTTGCTTAGAAGA...TTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGCTTGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CCA 90 bp AGACACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAATCGTATCTATCCCACTaGAGGTCAAATCAGCTGCAC +
Preference number: 4 (lower is better)
Translates to: RHHEAEYLFTNQPTNPTKSYLSH*RSNQLH
Trigger: GTGCAGCTGATTTGACCTCCAGTGGGATAGATACGA...TTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGTGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CCA 90 bp TATCTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACATCCGCTCCTTTTCTTTaGAGGGTAGGCCAAAAATCC +
Preference number: 4 (lower is better)
Translates to: YLFTNQPTNPTKHISELTSAPFL*RVGQKS
Trigger: GGATTTTTGGCCTACCCTCCAAAGAAAAGGAGCGGA...TGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CCA 90 bp GGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCCTGGACAGAAACCAAATATTaGCATGTCTTCCCGACAGAG +
Preference number: 4 (lower is better)
Translates to: GWAILSWCLGLTSIFHSWTETKY*HVFPTE
Trigger: CTCTGTCGGGAAGACATGCCAATATTTGGTTTCTGT...CCAGGAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp ACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACACACCAAAGGCGGCTTGCTaGATGAGCTATGTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: TMKLNICLQTNQPTQPNTPKAAC*MSYVFF
Trigger: AAAGAAGACATAGCTCATCCAGCAAGCCGCCTTTGG...TGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CCA 90 bp ACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACACATGCCTCCTTTGCTTTTaGACAGAGAAGGGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: TMKLNICLQTNQPTQPNTCLLCF*TEKGRR
Trigger: CCTTCTTCCCTTCTCTGTCCAAAAGCAAAGGAGGCA...TGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CCA 90 bp AACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTCCTTTATGAGTTGCCTCCTTTGCTTTTaGACAGAGAAGGGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: NTDKSNSVAELDPVSFMSCLLCF*TEKGRR
Trigger: CCTTCTTCCCTTCTCTGTCCAAAAGCAAAGGAGGCA...ACTCATAAAGGACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp ACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACACACTCTACTTTGCTGAATaGGATGCATTGGCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: TMKLNICLQTNQPTQPNTLYFAE*DALAWC
Trigger: ACACCAGGCCAATGCATCCCATTCAGCAAAGTAGAG...TGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CCA 90 bp GCCTCCAAAATGATTTATACTTGCTGTCTGGGCATCAAAAATTTCAAACCAGTTTGGGTGAGGTGGTACTaGGCACTGGTGGGATTTTCT +
Preference number: 4 (lower is better)
Translates to: ASKMIYTCCLGIKNFKPVWVRWY*ALVGFS
Trigger: AGAAAATCCCACCAGTGCCCAGTACCACCTCACCCA...AACTGGTTTGAAATTTTTGATGCCCAGACAGCAAGTATAAATCATTTTGGAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp ACAAAAACTTCTCACAGATTGGTAGCAAGCAGTTCAGACCACTTTAACACTGATGCTGTGCATTTAGTGTaGTTCCATGAGCTGGTACCG +
Preference number: 4 (lower is better)
Translates to: TKTSHRLVASSSDHFNTDAVHLV*FHELVP
Trigger: CGGTACCAGCTCATGGAACCACACTAAATGCACAGC...ATCAGTGTTAAAGTGGTCTGAACTGCTTGCTACCAATCTGTGAGAAGTTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp GACACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACAAGAGGACACTTGTCTaGATTGCATACTGCACACAG +
Preference number: 4 (lower is better)
Translates to: DTMKLNICLQTNQPTQPNKRTLV*IAYCTQ
Trigger: CTGTGTGCAGTATGCAATCCAGACAAGTGTCCTCTT...GTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CCA 90 bp GCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCAAGAGGACACTTGTCTaGATTGCATACTGCACACAG +
Preference number: 4 (lower is better)
Translates to: AVQTTLTLIKAIRWLNLIKRTLV*IAYCTQ
Trigger: CTGTGTGCAGTATGCAATCCAGACAAGTGTCCTCTT...GATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp TCAAAAGGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTTCCTGAGCCGCCACTaGTACTGCTACTGGCATTTT +
Preference number: 4 (lower is better)
Translates to: SKGWAILSWCLGLTSIFHFLSRH*YCYWHF
Trigger: AAAATGCCAGTAGCAGTACCAGTGGCGGCTCAGGAA...ATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCTTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp GGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCCTGGAACATTTCCTGAGCCGCCACTaGTACTGCTACTGGCATTTT +
Preference number: 4 (lower is better)
Translates to: GYFVMVSWANIYISFLEHFLSRH*YCYWHF
Trigger: AAAATGCCAGTAGCAGTACCAGTGGCGGCTCAGGAA...ATGTTCCAGGAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp TATCTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACATTGAGGCCGATGCTATaGGAAGATGTTACCGTTGAG +
Preference number: 4 (lower is better)
Translates to: YLFTNQPTNPTKHISELTLRPML*EDVTVE
Trigger: CTCAACGGTAACATCTTCCCATAGCATCGGCCTCAA...TGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CCA 90 bp CATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTGGGAAAAACTGCCGTaGGAGTTGACAGGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: HEAEYLFTNQPTNPTKHIWEKLP*ELTGSS
Trigger: TGAACTGCCTGTCAACTCCCACGGCAGTTTTTCCCA...AATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CCA 90 bp ACAAAAACAAAAACTTCTCACAGATTGGTAGCAAGCAGTTCAGACCACTTTAACAGAGGAGTGTGTGAGTaGGAAAAACTGCCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: TKTKTSHRLVASSSDHFNRGVCE*EKLPWE
Trigger: CTCCCACGGCAGTTTTTCCCACTCACACACTCCTCT...GTTAAAGTGGTCTGAACTGCTTGCTACCAATCTGTGAGAAGTTTTTGTTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp ACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACACACTTTGGCAACCTTTGTaGGTTTGCTGCTGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: TMKLNICLQTNQPTQPNTLWQPL*VCCCCC
Trigger: ACAACAGCAGCAGCAAACCCACAAAGGTTGCCAAAG...TGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CCA 90 bp ACAAAAACAAAAACTTCTCACAGATTGGTAGCAAGCAGTTCAGACCACTTTAACTCACGGCTGGCACTTTaGCAACCTTTGTGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: TKTKTSHRLVASSSDHFNSRLAL*QPLWVC
Trigger: GCAAACCCACAAAGGTTGCCAAAGTGCCAGCCGTGA...GTTAAAGTGGTCTGAACTGCTTGCTACCAATCTGTGAGAAGTTTTTGTTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp CTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAAAAGACATTGTTCACGGCTaGCACTTTGGCAACCTTTGT +
Preference number: 4 (lower is better)
Translates to: LFTNQPTNPTKHISELTKDIVHG*HFGNLC
Trigger: ACAAAGGTTGCCAAAGTGCCAGCCGTGAACAATGTC...TTTTGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CCA 90 bp ACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTCCTTTATGAGTACTGACATTGTTCACGGCTaGCACTTTGGCAACCTTTGT +
Preference number: 4 (lower is better)
Translates to: TDKSNSVAELDPVSFMSTDIVHG*HFGNLC
Trigger: ACAAAGGTTGCCAAAGTGCCAGCCGTGAACAATGTC...AGTACTCATAAAGGACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp GGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCCTGGAACATGTCCAGAGTGCTGAGTaGAGGTGTAACTTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: GYFVMVSWANIYISFLEHVQSAE*RCNLSS
Trigger: TGAGGACAAGTTACACCTCCACTCAGCACTCTGGAC...ATGTTCCAGGAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp GTACTCACTGCTAGAGACATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCATAAAAGCAATTCGGTaGCTGAACTTGATCCAGTGT +
Preference number: 4 (lower is better)
Translates to: VLTARDIASGKSSLKQQPIKAIR*LNLIQC
Trigger: ACACTGGATCAAGTTCAGCCACCGAATTGCTTTTAT...GGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATGTCTCTAGCAGTGAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp CATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTAATCTACTTGAAGAGTaGCTCTGTGATATACTGCAA +
Preference number: 4 (lower is better)
Translates to: HSFREILVKTTARQVSTLNLLEE*LCDILQ
Trigger: TTGCAGTATATCACAGAGCCACTCTTCAAGTAGATT...AAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp TGTTTGTGGCAGACAGAATCCAAAATGGCTAATTTCCTAATCCCGATGCTCTGTCAACGATCAGCGCCTTaGAAATTTTACCCTGTGTTC +
Preference number: 4 (lower is better)
Translates to: CLWQTESKMANFLIPMLCQRSAP*KFYPVF
Trigger: GAACACAGGGTAAAATTTCCAAGGCGCTGATCGTTG...ACAGAGCATCGGGATTAGGAAATTAGCCATTTTGGATTCTGTCTGCCACAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CCA 90 bp GTACTCACTGCTAGAGACATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCCATCGTGTAAGTTGCTaGCTGACAAAAAGATCTGTA +
Preference number: 4 (lower is better)
Translates to: VLTARDIASGKSSLKQQPHRVSC*LTKRSV
Trigger: TACAGATCTTTTTGTCAGCCAGCAACTTACACGATG...GGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATGTCTCTAGCAGTGAGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
3UTR CAA 72 bp CTCTTGGCTCTGAAAATAAATTCTACCCATACCCCATaGCACTTGTCACCAAGGAATCAACTAGGTACGTTC +
Preference number: 4 (lower is better)
Translates to: LLALKINSTHTP*HLSPRNQLGTF
Trigger: GAACGTACCTAGTTGATTCCTTGGTGACAAGTGCAATGGGGTATGGGTAGAATTTATTTTCAGAGCCAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR TCA 90 bp ACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTCCTTTATGAGTACTAGCTACAAAAGGCTTTaGTTCGGAAGGAATCACTCC +
Preference number: 4 (lower is better)
Translates to: TDKSNSVAELDPVSFMSTSYKRL*FGRNHS
Trigger: GGAGTGATTCCTTCCGAATCAAAGCCTTTTGTAGCT...AGTACTCATAAAGGACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp CTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAAAAAGCTACAAAAGGCTTTaGTTCGGAAGGAATCACTCC +
Preference number: 4 (lower is better)
Translates to: LFTNQPTNPTKHISELTKSYKRL*FGRNHS
Trigger: GGAGTGATTCCTTCCGAATCAAAGCCTTTTGTAGCT...TTTTGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR TCA 90 bp GACACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACCTGAGGATGATGACCTaGATAATGACAGTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: DTMKLNICLQTNQPTQPNLRMMT*IMTVQF
Trigger: AAACTGGACTGTCATTATTCAGGTCATCATCCTCAG...GTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR TCA 90 bp CTCCAAAATGATTTATACTTGCTGTCTGGGCATCAAAAATTTCAAACCAGTTTGCTGCTGCCAGATAGCTaGCTCCACATTGTGATGTCG +
Preference number: 4 (lower is better)
Translates to: LQNDLYLLSGHQKFQTSLLLPDS*LHIVMS
Trigger: CGACATCACAATGTGGAGTCAGCTATCTGGCAGCAG...CAAACTGGTTTGAAATTTTTGATGCCCAGACAGCAAGTATAAATCATTTTGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp AGACACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAATTTAGTGTGGTTCCATaGGCTGGTACCGATTTGCTA +
Preference number: 4 (lower is better)
Translates to: RHHEAEYLFTNQPTNPTKFSVVP*AGTDLL
Trigger: TAGCAAATCGGTACCAGCTCATGGAACCACACTAAA...TTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR TCA 90 bp AATAAACATCTGAAGTGGCATGAAGGGGAGTGCATACAAAAACACACAATGCCAACATCTGAAGTGGCATaGAGGGGAGTGCATACAAAA +
Preference number: 4 (lower is better)
Translates to: NKHLKWHEGECIQKHTMPTSEVA*RGVHTK
Trigger: TTTTGTATGCACTCCCCTTCATGCCACTTCAGATGT...TGGCATTGTGTGTTTTTGTATGCACTCCCCTTCATGCCACTTCAGATGTTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR TCA 90 bp GTAGCAAGCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACCTGAAACTGAAGTTTaGAACCCAAGAACTGTAGGA +
Preference number: 4 (lower is better)
Translates to: VASSSDHFNTDKSNSVAEPETEV*NPRTVG
Trigger: TCCTACAGTTCTTGGGTTTCAAACTTCAGTTTCAGG...TTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGCTTGCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR TCA 90 bp TCAAAAGGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATGGATGGAAACCAGACTaGTTTCTCCCAACTATGCCA +
Preference number: 4 (lower is better)
Translates to: SKGWAILSWCLGLTSIFHGWKPD*FLPTMP
Trigger: TGGCATAGTTGGGAGAAATCAGTCTGGTTTCCATCC...ATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCTTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR TCA 90 bp TCAGCGCCTTGGAAATTTTACCCTGTGTTCGGCAACTTCGTGTGTTCTTCTAAGCAATCCATCACCAATTaGATTACTATGAACCAAGAG +
Preference number: 4 (lower is better)
Translates to: SAPWKFYPVFGNFVCSSKQSITN*ITMNQE
Trigger: CTCTTGGTTCATAGTAATTCAATTGGTGATGGATTG...CTTAGAAGAACACACGAAGTTGCCGAACACAGGGTAAAATTTCCAAGGCGCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR GCA 90 bp GGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCCTGGAACATTTGCACTGCCTCCTTTaGTTTTGGACAGAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: GYFVMVSWANIYISFLEHLHCLL*FWTEKG
Trigger: TCCCTTCTCTGTCCAAAAGCAAAGGAGGCAGTGCAA...ATGTTCCAGGAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp GGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCCTGGAACATTGCTTCCACTTGCACTaGCTCCTTTGCTTTTGGACA +
Preference number: 4 (lower is better)
Translates to: GYFVMVSWANIYISFLEHCFHLH*LLCFWT
Trigger: TGTCCAAAAGCAAAGGAGGCAGTGCAAGTGGAAGCA...ATGTTCCAGGAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp GCCTCCAAAATGATTTATACTTGCTGTCTGGGCATCAAAAATTTCAAACCAGTTGTGCAGGAAGCCCTTTaGCATTCAGAATCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: ASKMIYTCCLGIKNFKPVVQEAL*HSESVQ
Trigger: CTGGACAGATTCTGAATGGCAAAGGGCTTCCTGCAC...AACTGGTTTGAAATTTTTGATGCCCAGACAGCAAGTATAAATCATTTTGGAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp ACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACACATTAAGGAATGTGTCTTaGATGTCAAAGACCGGGTGC +
Preference number: 4 (lower is better)
Translates to: TMKLNICLQTNQPTQPNTLRNVS*MSKTGC
Trigger: GCACCCGGTCTTTGACATGCAAGACACATTCCTTAA...TGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR GCA 90 bp CATTGCTATCAAAATCTAAAGCCTAATTCCCTTCTTCAGAGGGTTGCTCGGGATAAATGTGCAAAAAGATaGTGGCTGAGGATGATGACC +
Preference number: 4 (lower is better)
Translates to: HCYQNLKPNSLLQRVARDKCAKR*WLRMMT
Trigger: GGTCATCATCCTCAGCCAGCATCTTTTTGCACATTT...ATCCCGAGCAACCCTCTGAAGAAGGGAATTAGGCTTTAGATTTTGATAGCAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp GCCTCCAAAATGATTTATACTTGCTGTCTGGGCATCAAAAATTTCAAACCAGTTAGCCGCCACTGGTACTaGTACTGGCATTTTGACAGT +
Preference number: 4 (lower is better)
Translates to: ASKMIYTCCLGIKNFKPVSRHWY*YWHFDS
Trigger: ACTGTCAAAATGCCAGTAGCAGTACCAGTGGCGGCT...AACTGGTTTGAAATTTTTGATGCCCAGACAGCAAGTATAAATCATTTTGGAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp CCAAAACATTCTTTTGCCCAGCCAATCTACTTGAAGAGTGGCTCTGTGATATACGACGTTCACCGCATTTaGTTTATTCGTCACACAGTT +
Preference number: 4 (lower is better)
Translates to: PKHSFAQPIYLKSGSVIYDVHRI*FIRHTV
Trigger: AACTGTGTGACGAATAAAGCAAATGCGGTGAACGTC...GTATATCACAGAGCCACTCTTCAAGTAGATTGGCTGGGCAAAAGAATGTTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp CTATCCCTTGACATTTGTTCATGTTCTATACAGCAGCCAACACAAAGTCCAGCTGACGTTCACCGCATTTaGTTTATTCGTCACACAGTT +
Preference number: 4 (lower is better)
Translates to: LSLDICSCSIQQPTQSPADVHRI*FIRHTV
Trigger: AACTGTGTGACGAATAAAGCAAATGCGGTGAACGTC...AGCTGGACTTTGTGTTGGCTGCTGTATAGAACATGAACAAATGTCAAGGGATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR GCA 90 bp TCAAAAGGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATCTACCCATACCCCATTaGACTTGTCACCAAGGAATC +
Preference number: 4 (lower is better)
Translates to: SKGWAILSWCLGLTSIFHLPIPH*TCHQGI
Trigger: GATTCCTTGGTGACAAGTGCAATGGGGTATGGGTAG...ATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCTTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CCA 90 bp CATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTCAAATCAGCTGCACTaGTGCCTGTTTCCTCATCCA +
Preference number: 4 (lower is better)
Translates to: HEAEYLFTNQPTNPTKHISNQLH*CLFPHP
Trigger: TGGATGAGGAAACAGGCACCAGTGCAGCTGATTTGA...AATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CCA 90 bp GTAGCAAGCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAAACAGAAACCAAATATTaGCATGTCTTCCCGACAGAG +
Preference number: 4 (lower is better)
Translates to: VASSSDHFNTDKSNSVAETETKY*HVFPTE
Trigger: CTCTGTCGGGAAGACATGCCAATATTTGGTTTCTGT...TTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGCTTGCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp CAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTGTGATTTCAACAACTTaGAACTTGATGAGGATGCGC +
Preference number: 4 (lower is better)
Translates to: QTTLTLIKAIRWLNLIQCVISTT*NLMRMR
Trigger: GCGCATCCTCATCAAGTTCCAAGTTGTTGAAATCAC...ACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp GACACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACTCAATAACCCCACAGTaGATGTCAGGATCAAACTCT +
Preference number: 4 (lower is better)
Translates to: DTMKLNICLQTNQPTQPNSITPQ*MSGSNS
Trigger: AGAGTTTGATCCTGACATCCACTGTGGGGTTATTGA...GTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CCA 90 bp CAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTTCAATAACCCCACAGTaGATGTCAGGATCAAACTCT +
Preference number: 4 (lower is better)
Translates to: QTTLTLIKAIRWLNLIQCSITPQ*MSGSNS
Trigger: AGAGTTTGATCCTGACATCCACTGTGGGGTTATTGA...ACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp CTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAAAAGAAGTCGATTCCACCTaGAGTCAAACACGTAATAGC +
Preference number: 4 (lower is better)
Translates to: LFTNQPTNPTKHISELTKEVDST*SQTRNS
Trigger: GCTATTACGTGTTTGACTCCAGGTGGAATCGACTTC...TTTTGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CCA 90 bp ACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTCCTTTATGAGTACTGAAGTCGATTCCACCTaGAGTCAAACACGTAATAGC +
Preference number: 4 (lower is better)
Translates to: TDKSNSVAELDPVSFMSTEVDST*SQTRNS
Trigger: GCTATTACGTGTTTGACTCCAGGTGGAATCGACTTC...AGTACTCATAAAGGACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp CTGGAACATTGCTATCAAAATCTAAAGCCTAATTCCCTTCTTCAGAGGGTTGCTTGTGGTTCCATGAGCTaGTACCGATTTGCTATTTGG +
Preference number: 4 (lower is better)
Translates to: LEHCYQNLKPNSLLQRVACGSMS*YRFAIW
Trigger: CCAAATAGCAAATCGGTACCAGCTCATGGAACCACA...AGCAACCCTCTGAAGAAGGGAATTAGGCTTTAGATTTTGATAGCAATGTTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp GCCTCCAAAATGATTTATACTTGCTGTCTGGGCATCAAAAATTTCAAACCAGTTGCTGTGCATTTAGTGTaGTTCCATGAGCTGGTACCG +
Preference number: 4 (lower is better)
Translates to: ASKMIYTCCLGIKNFKPVAVHLV*FHELVP
Trigger: CGGTACCAGCTCATGGAACCACACTAAATGCACAGC...AACTGGTTTGAAATTTTTGATGCCCAGACAGCAAGTATAAATCATTTTGGAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp CTCCAAAATGATTTATACTTGCTGTCTGGGCATCAAAAATTTCAAACCAGTTTGTCACGGCTGGCACTTTaGCAACCTTTGTGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: LQNDLYLLSGHQKFQTSLSRLAL*QPLWVC
Trigger: GCAAACCCACAAAGGTTGCCAAAGTGCCAGCCGTGA...CAAACTGGTTTGAAATTTTTGATGCCCAGACAGCAAGTATAAATCATTTTGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp TCAAAAGGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATGACATTGTTCACGGCTaGCACTTTGGCAACCTTTGT +
Preference number: 4 (lower is better)
Translates to: SKGWAILSWCLGLTSIFHDIVHG*HFGNLC
Trigger: ACAAAGGTTGCCAAAGTGCCAGCCGTGAACAATGTC...ATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCTTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp AAAAGGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCTCTCTGGAAGGTTTCTaGTCTCCAGTTAAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: KRLGYFVMVSWANIYISFSLEGF*SPVKVP
Trigger: AGGCACCTTAACTGGAGACCAGAAACCTTCCAGAGA...GAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp CTCCAAAATGATTTATACTTGCTGTCTGGGCATCAAAAATTTCAAACCAGTTTGCAGCCCTGTGTTCTCTaGAAGGTTTCTGGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: LQNDLYLLSGHQKFQTSLQPCVL*KVSGLQ
Trigger: CTGGAGACCAGAAACCTTCCAGAGAACACAGGGCTG...CAAACTGGTTTGAAATTTTTGATGCCCAGACAGCAAGTATAAATCATTTTGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp TCAAAAGGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCCCCCGACCCAATTTaGCCTTCCTTTCTCAAAACT +
Preference number: 4 (lower is better)
Translates to: SKGWAILSWCLGLTSIFHSPDPI*PSFLKT
Trigger: AGTTTTGAGAAAGGAAGGCCAAATTGGGTCGGGGGA...ATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCTTTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CCA 90 bp TTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAAAAGATTTAAGGGAGAAGAAATaGGCATTCCCATGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: FTNQPTNPTKHISELTKDLREKK*AFPWGS
Trigger: TGAGCCCCATGGGAATGCCCATTTCTTCTCCCTTAA...ATCTTTTGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR TCA 90 bp AGACACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACATCTGCTGCAATTGTaGAAGCTCGTTCGTCTTAAT +
Preference number: 4 (lower is better)
Translates to: RHHEAEYLFTNQPTNPTKHLLQL*KLVRLN
Trigger: ATTAAGACGAACGAGCTTTCACAATTGCAGCAGATG...TTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGTGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR TCA 90 bp GTAGCAAGCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACCATCCATTTTCGGATaGATCTTTTCCACTTTCACA +
Preference number: 4 (lower is better)
Translates to: VASSSDHFNTDKSNSVAEPSIFG*IFSTFT
Trigger: TGTGAAAGTGGAAAAGATTCATCCGAAAATGGATGG...TTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGCTTGCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp CCAAAACATTCTTTTGCCCAGCCAATCTACTTGAAGAGTGGCTCTGTGATATACCCATCCATTTTCGGATaGATCTTTTCCACTTTCACA +
Preference number: 4 (lower is better)
Translates to: PKHSFAQPIYLKSGSVIYPSIFG*IFSTFT
Trigger: TGTGAAAGTGGAAAAGATTCATCCGAAAATGGATGG...GTATATCACAGAGCCACTCTTCAAGTAGATTGGCTGGGCAAAAGAATGTTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp TCAAAAGGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATAGCTACAAAAGGCTTTaGTTCGGAAGGAATCACTCC +
Preference number: 4 (lower is better)
Translates to: SKGWAILSWCLGLTSIFHSYKRL*FGRNHS
Trigger: GGAGTGATTCCTTCCGAATCAAAGCCTTTTGTAGCT...ATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCTTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp ACAAAAACTTCTCACAGATTGGTAGCAAGCAGTTCAGACCACTTTAACACTGATTTTAGTGTGGTTCCATaGGCTGGTACCGATTTGCTA +
Preference number: 4 (lower is better)
Translates to: TKTSHRLVASSSDHFNTDFSVVP*AGTDLL
Trigger: TAGCAAATCGGTACCAGCTCATGGAACCACACTAAA...ATCAGTGTTAAAGTGGTCTGAACTGCTTGCTACCAATCTGTGAGAAGTTTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp AAAAGGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCTTTAGTGTGGTTCCATaGGCTGGTACCGATTTGCTA +
Preference number: 4 (lower is better)
Translates to: KRLGYFVMVSWANIYISFFSVVP*AGTDLL
Trigger: TAGCAAATCGGTACCAGCTCATGGAACCACACTAAA...GAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp TCAAAAGGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATCTGCTACTGGCATTTTaGCAGTTAGTGCTGTTACCA +
Preference number: 4 (lower is better)
Translates to: SKGWAILSWCLGLTSIFHLLLAF*QLVLLP
Trigger: TGGTAACAGCACTAACTGTCAAAATGCCAGTAGCAG...ATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCTTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp GGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCCTGGAACATCTGCTACTGGCATTTTaGCAGTTAGTGCTGTTACCA +
Preference number: 4 (lower is better)
Translates to: GYFVMVSWANIYISFLEHLLLAF*QLVLLP
Trigger: TGGTAACAGCACTAACTGTCAAAATGCCAGTAGCAG...ATGTTCCAGGAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp GTAGCAAGCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAAAATGCCAGAAGTGCTTaGAGCAGAAATCTACACTTA +
Preference number: 4 (lower is better)
Translates to: VASSSDHFNTDKSNSVAENARSA*SRNLHL
Trigger: TAAGTGTAGATTTCTGCTTCAAGCACTTCTGGCATT...TTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGCTTGCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR TCA 90 bp CAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTAATGCCAGAAGTGCTTaGAGCAGAAATCTACACTTA +
Preference number: 4 (lower is better)
Translates to: QTTLTLIKAIRWLNLIQCNARSA*SRNLHL
Trigger: TAAGTGTAGATTTCTGCTTCAAGCACTTCTGGCATT...ACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR TCA 90 bp GGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCCTGGTCTTTCGGAACAACATaGTCGATCTGTAAATTCCAT +
Preference number: 4 (lower is better)
Translates to: GWAILSWCLGLTSIFHSWSFGTT*SICKFH
Trigger: ATGGAATTTACAGATCGATCATGTTGTTCCGAAAGA...CCAGGAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR GCA 90 bp ACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACACATGGATCTTCATCTGCTaGAATTGTGAAAGCTCGTTC +
Preference number: 4 (lower is better)
Translates to: TMKLNICLQTNQPTQPNTWIFIC*NCESSF
Trigger: GAACGAGCTTTCACAATTGCAGCAGATGAAGATCCA...TGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR GCA 90 bp AATAAACATCTGAAGTGGCATGAAGGGGAGTGCATACAAAAACACACAATGCCATGGATCTTCATCTGCTaGAATTGTGAAAGCTCGTTC +
Preference number: 4 (lower is better)
Translates to: NKHLKWHEGECIQKHTMPWIFIC*NCESSF
Trigger: GAACGAGCTTTCACAATTGCAGCAGATGAAGATCCA...TGGCATTGTGTGTTTTTGTATGCACTCCCCTTCATGCCACTTCAGATGTTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR GCA 90 bp GACACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACCAGATTTCAGTAGTGTaGCATCCATTTTCGGATGAA +
Preference number: 4 (lower is better)
Translates to: DTMKLNICLQTNQPTQPNQISVV*HPFSDE
Trigger: TTCATCCGAAAATGGATGGCACACTACTGAAATCTG...GTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR GCA 90 bp CATTGCTATCAAAATCTAAAGCCTAATTCCCTTCTTCAGAGGGTTGCTCGGGATCAGATTTCAGTAGTGTaGCATCCATTTTCGGATGAA +
Preference number: 4 (lower is better)
Translates to: HCYQNLKPNSLLQRVARDQISVV*HPFSDE
Trigger: TTCATCCGAAAATGGATGGCACACTACTGAAATCTG...ATCCCGAGCAACCCTCTGAAGAAGGGAATTAGGCTTTAGATTTTGATAGCAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp AGACACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAAAAATGTGCAAAAAGATaGTGGCTGAGGATGATGACC +
Preference number: 4 (lower is better)
Translates to: RHHEAEYLFTNQPTNPTKKCAKR*WLRMMT
Trigger: GGTCATCATCCTCAGCCAGCATCTTTTTGCACATTT...TTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGTGTCT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR GCA 90 bp CTATCCCTTGACATTTGTTCATGTTCTATACAGCAGCCAACACAAAGTCCAGCTTGGGCCTCAAAGATTTaGTGGATTTCAATTTCTGAG +
Preference number: 4 (lower is better)
Translates to: LSLDICSCSIQQPTQSPAWASKI*WISISE
Trigger: CTCAGAAATTGAAATCCAGCAAATCTTTGAGGCCCA...AGCTGGACTTTGTGTTGGCTGCTGTATAGAACATGAACAAATGTCAAGGGATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR GCA 90 bp AGGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCCTGGCCAAAACATTCTTTTaGCCAGCCAATCTACTTGAA +
Preference number: 4 (lower is better)
Translates to: RLGYFVMVSWANIYISFLAKTFF*PANLLE
Trigger: TTCAAGTAGATTGGCTGGGCAAAAGAATGTTTTGGC...CAGGAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp GCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCTACAAAAACACACAATaGCAGAAGTGCTTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: AVQTTLTLIKAIRWLNLIYKNTQ*QKCLKQ
Trigger: CTGCTTCAAGCACTTCTGGCATTGTGTGTTTTTGTA...GATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR GCA 90 bp AATAAACATCTGAAGTGGCATGAAGGGGAGTGCATACAAAAACACACAATGCCAGGGCAATCCTATACATaGATCACAAAAGACCTTCAG +
Preference number: 4 (lower is better)
Translates to: NKHLKWHEGECIQKHTMPGQSYT*ITKDLQ
Trigger: CTGAAGGTCTTTTGTGATGCATGTATAGGATTGCCC...TGGCATTGTGTGTTTTTGTATGCACTCCCCTTCATGCCACTTCAGATGTTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR GCA 90 bp ACTTGTTATTGTGGATCCTATTCACATCTTTCGGAACAACATGATCGATCTGTAGATTTCTCCCAACTATaGCAAACTGGCCCATCCATG +
Preference number: 4 (lower is better)
Translates to: TCYCGSYSHLSEQHDRSVDFSQL*QTGPSM
Trigger: CATGGATGGGCCAGTTTGGCATAGTTGGGAGAAATC...TACAGATCGATCATGTTGTTCCGAAAGATGTGAATAGGATCCACAATAACAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR GCA 90 bp AGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAACCAGGAAGAAGCAATaGCCACTTCATCTGTATGAA +
Preference number: 4 (lower is better)
Translates to: SSDHFNTDKSNSVAELDPTRKKQ*PLHLYE
Trigger: TTCATACAGATGAAGTGGGCATTGCTTCTTCCTGGT...TGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR GCA 90 bp AGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAATCATGATTTGGGTCTaGCCACCAACTCCAAATATG +
Preference number: 4 (lower is better)
Translates to: SSDHFNTDKSNSVAELDPIMIWV*PPTPNM
Trigger: CATATTTGGAGTTGGTGGGCAGACCCAAATCATGAT...TGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484332.1
CDS-3UTR CCA 90 bp TATCTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAACAGAAACCAAATATTaGCATGTCTTCCCGACAGAG +
Preference number: 4 (lower is better)
Translates to: YLFTNQPTNPTKHISELTTETKY*HVFPTE
Trigger: CTCTGTCGGGAAGACATGCCAATATTTGGTTTCTGT...TGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CCA 90 bp ACATTCTTTTGCCCAGCCAATCTACTTGAAGAGTGGCTCTGTGATATACTGCAAGAAATCATCATGGGCTaGACAGAAACCAAATATTGG +
Preference number: 4 (lower is better)
Translates to: TFFCPANLLEEWLCDILQEIIMG*TETKYW
Trigger: CCAATATTTGGTTTCTGTCCAGCCCATGATGATTTC...TTGCAGTATATCACAGAGCCACTCTTCAAGTAGATTGGCTGGGCAAAAGAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp ACAAAAACAAAAACTTCTCACAGATTGGTAGCAAGCAGTTCAGACCACTTTAACCCAAAGGCGGCTTGCTaGATGAGCTATGTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: TKTKTSHRLVASSSDHFNPKAAC*MSYVFF
Trigger: AAAGAAGACATAGCTCATCCAGCAAGCCGCCTTTGG...GTTAAAGTGGTCTGAACTGCTTGCTACCAATCTGTGAGAAGTTTTTGTTTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp CTCCAAAATGATTTATACTTGCTGTCTGGGCATCAAAAATTTCAAACCAGTTTGAGGAAAATACTGAAGTaGGAGGAACGGCCAAAGGCG +
Preference number: 4 (lower is better)
Translates to: LQNDLYLLSGHQKFQTSLRKILK*EERPKA
Trigger: CGCCTTTGGCCGTTCCTCCCACTTCAGTATTTTCCT...CAAACTGGTTTGAAATTTTTGATGCCCAGACAGCAAGTATAAATCATTTTGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp AGACACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAAGTGATTTCAACAACTTaGAACTTGATGAGGATGCGC +
Preference number: 4 (lower is better)
Translates to: RHHEAEYLFTNQPTNPTKVISTT*NLMRMR
Trigger: GCGCATCCTCATCAAGTTCCAAGTTGTTGAAATCAC...TTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGTGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CCA 90 bp AATAAACATCTGAAGTGGCATGAAGGGGAGTGCATACAAAAACACACAATGCCAGCTGCAGTTTCTCTTTaGGTGATTTCAACAACTTGG +
Preference number: 4 (lower is better)
Translates to: NKHLKWHEGECIQKHTMPAAVSL*VISTTW
Trigger: CCAAGTTGTTGAAATCACCCAAAGAGAAACTGCAGC...TGGCATTGTGTGTTTTTGTATGCACTCCCCTTCATGCCACTTCAGATGTTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CCA 90 bp TATCTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAGCTGCAGTTTCTCTTTaGGTGATTTCAACAACTTGG +
Preference number: 4 (lower is better)
Translates to: YLFTNQPTNPTKHISELTAAVSL*VISTTW
Trigger: CCAAGTTGTTGAAATCACCCAAAGAGAAACTGCAGC...TGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CCA 90 bp ACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTCCTTTATGAGTACTGCTGCAGTTTCTCTTTaGGTGATTTCAACAACTTGG +
Preference number: 4 (lower is better)
Translates to: TDKSNSVAELDPVSFMSTAAVSL*VISTTW
Trigger: CCAAGTTGTTGAAATCACCCAAAGAGAAACTGCAGC...AGTACTCATAAAGGACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp GCCTCCAAAATGATTTATACTTGCTGTCTGGGCATCAAAAATTTCAAACCAGTTCTCTACTTTGCTGAATaGGATGCATTGGCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: ASKMIYTCCLGIKNFKPVLYFAE*DALAWC
Trigger: ACACCAGGCCAATGCATCCCATTCAGCAAAGTAGAG...AACTGGTTTGAAATTTTTGATGCCCAGACAGCAAGTATAAATCATTTTGGAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp CTGGAACATTGCTATCAAAATCTAAAGCCTAATTCCCTTCTTCAGAGGGTTGCTTCAATAACCCCACAGTaGATGTCAGGATCAAACTCT +
Preference number: 4 (lower is better)
Translates to: LEHCYQNLKPNSLLQRVASITPQ*MSGSNS
Trigger: AGAGTTTGATCCTGACATCCACTGTGGGGTTATTGA...AGCAACCCTCTGAAGAAGGGAATTAGGCTTTAGATTTTGATAGCAATGTTCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp TTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAAAAGATTGTGGTTCCATGAGCTaGTACCGATTTGCTATTTGG +
Preference number: 4 (lower is better)
Translates to: FTNQPTNPTKHISELTKDCGSMS*YRFAIW
Trigger: CCAAATAGCAAATCGGTACCAGCTCATGGAACCACA...ATCTTTTGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CCA 90 bp GGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCCTGGAACATAAGAGGACACTTGTCTaGATTGCATACTGCACACAG +
Preference number: 4 (lower is better)
Translates to: GYFVMVSWANIYISFLEHKRTLV*IAYCTQ
Trigger: CTGTGTGCAGTATGCAATCCAGACAAGTGTCCTCTT...ATGTTCCAGGAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp CTCCAAAATGATTTATACTTGCTGTCTGGGCATCAAAAATTTCAAACCAGTTTGTGGGAAAAACTGCCGTaGGAGTTGACAGGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: LQNDLYLLSGHQKFQTSLWEKLP*ELTGSS
Trigger: TGAACTGCCTGTCAACTCCCACGGCAGTTTTTCCCA...CAAACTGGTTTGAAATTTTTGATGCCCAGACAGCAAGTATAAATCATTTTGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp ACAAAAACAAAAACTTCTCACAGATTGGTAGCAAGCAGTTCAGACCACTTTAACGACATTGTTCACGGCTaGCACTTTGGCAACCTTTGT +
Preference number: 4 (lower is better)
Translates to: TKTKTSHRLVASSSDHFNDIVHG*HFGNLC
Trigger: ACAAAGGTTGCCAAAGTGCCAGCCGTGAACAATGTC...GTTAAAGTGGTCTGAACTGCTTGCTACCAATCTGTGAGAAGTTTTTGTTTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp CAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTTCCATTCACAGAATTTaGTTGTGCTTCATTGCACAC +
Preference number: 4 (lower is better)
Translates to: QTTLTLIKAIRWLNLIQCSIHRI*LCFIAH
Trigger: GTGTGCAATGAAGCACAACCAAATTCTGTGAATGGA...ACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484332.1
CDS-3UTR TCA 90 bp GGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCCTGGAACATCATCTGCTGCAATTGTaGAAGCTCGTTCGTCTTAAT +
Preference number: 4 (lower is better)
Translates to: GYFVMVSWANIYISFLEHHLLQL*KLVRLN
Trigger: ATTAAGACGAACGAGCTTTCACAATTGCAGCAGATG...ATGTTCCAGGAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR TCA 90 bp ACATTCTTTTGCCCAGCCAATCTACTTGAAGAGTGGCTCTGTGATATACTGCAATCTTCTTTCATAATGTaGTTGAAATGCCTGCGGTTT +
Preference number: 4 (lower is better)
Translates to: TFFCPANLLEEWLCDILQSSFIM*LKCLRF
Trigger: AAACCGCAGGCATTTCAATCACATTATGAAAGAAGA...TTGCAGTATATCACAGAGCCACTCTTCAAGTAGATTGGCTGGGCAAAAGAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp CTGGAACATTGCTATCAAAATCTAAAGCCTAATTCCCTTCTTCAGAGGGTTGCTCCATCCATTTTCGGATaGATCTTTTCCACTTTCACA +
Preference number: 4 (lower is better)
Translates to: LEHCYQNLKPNSLLQRVAPSIFG*IFSTFT
Trigger: TGTGAAAGTGGAAAAGATTCATCCGAAAATGGATGG...AGCAACCCTCTGAAGAAGGGAATTAGGCTTTAGATTTTGATAGCAATGTTCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp AGACACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACCATCCATTTTCGGATaGATCTTTTCCACTTTCACA +
Preference number: 4 (lower is better)
Translates to: RHHEAEYLFTNQPTNPTKPSIFG*IFSTFT
Trigger: TGTGAAAGTGGAAAAGATTCATCCGAAAATGGATGG...TTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR TCA 90 bp CCAAAACATTCTTTTGCCCAGCCAATCTACTTGAAGAGTGGCTCTGTGATATACTTCTTTTCTTTCCTATaGGTTTGTCTAGAGGAGTGT +
Preference number: 4 (lower is better)
Translates to: PKHSFAQPIYLKSGSVIYFFSFL*VCLEEC
Trigger: ACACTCCTCTAGACAAACTCATAGGAAAGAAAAGAA...GTATATCACAGAGCCACTCTTCAAGTAGATTGGCTGGGCAAAAGAATGTTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp TGTTTGTGGCAGACAGAATCCAAAATGGCTAATTTCCTAATCCCGATGCTCTGTCTATTGGCTTGGCAGTaGACCACTTCAAATTATAAA +
Preference number: 4 (lower is better)
Translates to: CLWQTESKMANFLIPMLCLLAWQ*TTSNYK
Trigger: TTTATAATTTGAAGTGGTTCACTGCCAAGCCAATAG...ACAGAGCATCGGGATTAGGAAATTAGCCATTTTGGATTCTGTCTGCCACAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR TCA 90 bp TGTTTGTGGCAGACAGAATCCAAAATGGCTAATTTCCTAATCCCGATGCTCTGTCAGCTGAGATGCTCTTaGTTATGTGTACAAATTATC +
Preference number: 4 (lower is better)
Translates to: CLWQTESKMANFLIPMLCQLRCS*LCVQII
Trigger: GATAATTTGTACACATAATCAAGAGCATCTCAGCTG...ACAGAGCATCGGGATTAGGAAATTAGCCATTTTGGATTCTGTCTGCCACAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR TCA 90 bp GGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCCTGGAACATAACACAAAGTCCAGCTaGGATGCTCTTGATTATGTG +
Preference number: 4 (lower is better)
Translates to: GYFVMVSWANIYISFLEHNTKSS*DALDYV
Trigger: CACATAATCAAGAGCATCTCAGCTGGACTTTGTGTT...ATGTTCCAGGAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR GCA 90 bp AAAAGGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCTGGATCTTCATCTGCTaGAATTGTGAAAGCTCGTTC +
Preference number: 4 (lower is better)
Translates to: KRLGYFVMVSWANIYISFWIFIC*NCESSF
Trigger: GAACGAGCTTTCACAATTGCAGCAGATGAAGATCCA...GAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR GCA 90 bp ACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTCCTTTATGAGTACTCAGATTTCAGTAGTGTaGCATCCATTTTCGGATGAA +
Preference number: 4 (lower is better)
Translates to: TDKSNSVAELDPVSFMSTQISVV*HPFSDE
Trigger: TTCATCCGAAAATGGATGGCACACTACTGAAATCTG...AGTACTCATAAAGGACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp AAAAGGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCAAATGTGCAAAAAGATaGTGGCTGAGGATGATGACC +
Preference number: 4 (lower is better)
Translates to: KRLGYFVMVSWANIYISFKCAKR*WLRMMT
Trigger: GGTCATCATCCTCAGCCAGCATCTTTTTGCACATTT...GAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp TATCTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACATGGGCCTCAAAGATTTaGTGGATTTCAATTTCTGAG +
Preference number: 4 (lower is better)
Translates to: YLFTNQPTNPTKHISELTWASKI*WISISE
Trigger: CTCAGAAATTGAAATCCAGCAAATCTTTGAGGCCCA...TGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR GCA 90 bp AGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCATGGGCCTCAAAGATTTaGTGGATTTCAATTTCTGAG +
Preference number: 4 (lower is better)
Translates to: SSDHFNTDKSNSVAELDPWASKI*WISISE
Trigger: CTCAGAAATTGAAATCCAGCAAATCTTTGAGGCCCA...TGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp CATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACACATTGACGTTCACCGCATTTaGTTTATTCGTCACACAGTT +
Preference number: 4 (lower is better)
Translates to: HEAEYLFTNQPTNPTKHIDVHRI*FIRHTV
Trigger: AACTGTGTGACGAATAAAGCAAATGCGGTGAACGTC...AATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR GCA 90 bp AGGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCCTGAAACAACCCAACCACTaGAAATTTGGTTTTTGCAAG +
Preference number: 4 (lower is better)
Translates to: RLGYFVMVSWANIYISFLKQPNH*KFGFCK
Trigger: CTTGCAAAAACCAAATTTGCAGTGGTTGGGTTGTTT...CAGGAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CCA 90 bp TATCTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAGAAATCATCATGGGCTaGACAGAAACCAAATATTGG +
Preference number: 4 (lower is better)
Translates to: YLFTNQPTNPTKHISELTEIIMG*TETKYW
Trigger: CCAATATTTGGTTTCTGTCCAGCCCATGATGATTTC...TGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CCA 90 bp ACAAAAACAAAAACTTCTCACAGATTGGTAGCAAGCAGTTCAGACCACTTTAACGAAGTCGATTCCACCTaGAGTCAAACACGTAATAGC +
Preference number: 4 (lower is better)
Translates to: TKTKTSHRLVASSSDHFNEVDST*SQTRNS
Trigger: GCTATTACGTGTTTGACTCCAGGTGGAATCGACTTC...GTTAAAGTGGTCTGAACTGCTTGCTACCAATCTGTGAGAAGTTTTTGTTTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp ACTTGTTATTGTGGATCCTATTCACATCTTTCGGAACAACATGATCGATCTGTATGTGGTTCCATGAGCTaGTACCGATTTGCTATTTGG +
Preference number: 4 (lower is better)
Translates to: TCYCGSYSHLSEQHDRSVCGSMS*YRFAIW
Trigger: CCAAATAGCAAATCGGTACCAGCTCATGGAACCACA...TACAGATCGATCATGTTGTTCCGAAAGATGTGAATAGGATCCACAATAACAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CCA 90 bp ACAAAAACAAAAACTTCTCACAGATTGGTAGCAAGCAGTTCAGACCACTTTAACAAGAGGACACTTGTCTaGATTGCATACTGCACACAG +
Preference number: 4 (lower is better)
Translates to: TKTKTSHRLVASSSDHFNKRTLV*IAYCTQ
Trigger: CTGTGTGCAGTATGCAATCCAGACAAGTGTCCTCTT...GTTAAAGTGGTCTGAACTGCTTGCTACCAATCTGTGAGAAGTTTTTGTTTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp CATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACACATTAGAGTGAACCAACAGTaGGGAACTGTTTTTGCGTTT +
Preference number: 4 (lower is better)
Translates to: HEAEYLFTNQPTNPTKHIRVNQQ*GTVFAF
Trigger: AAACGCAAAAACAGTTCCCCACTGTTGGTTCACTCT...AATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CCA 90 bp CTATCCCTTGACATTTGTTCATGTTCTATACAGCAGCCAACACAAAGTCCAGCTAATCTACTTGAAGAGTaGCTCTGTGATATACTGCAA +
Preference number: 4 (lower is better)
Translates to: LSLDICSCSIQQPTQSPANLLEE*LCDILQ
Trigger: TTGCAGTATATCACAGAGCCACTCTTCAAGTAGATT...AGCTGGACTTTGTGTTGGCTGCTGTATAGAACATGAACAAATGTCAAGGGATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CCA 90 bp CTCCAAAATGATTTATACTTGCTGTCTGGGCATCAAAAATTTCAAACCAGTTTGTCTCTGGAAGGTTTCTaGTCTCCAGTTAAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: LQNDLYLLSGHQKFQTSLSLEGF*SPVKVP
Trigger: AGGCACCTTAACTGGAGACCAGAAACCTTCCAGAGA...CAAACTGGTTTGAAATTTTTGATGCCCAGACAGCAAGTATAAATCATTTTGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp AACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTCCTTTATGAGTTTACTCTCAAAAGGCTaGGCTATTTTGTCATGGTGT +
Preference number: 4 (lower is better)
Translates to: NTDKSNSVAELDPVSFMSLLSKG*AILSWC
Trigger: ACACCATGACAAAATAGCCCAGCCTTTTGAGAGTAA...ACTCATAAAGGACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp AACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTCCTTTATGAGTAATAAACATCTGAAGTaGCATGAAGGGGAGTGCATA +
Preference number: 4 (lower is better)
Translates to: NTDKSNSVAELDPVSFMSNKHLK*HEGECI
Trigger: TATGCACTCCCCTTCATGCCACTTCAGATGTTTATT...ACTCATAAAGGACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CCA 90 bp GCCTCCAAAATGATTTATACTTGCTGTCTGGGCATCAAAAATTTCAAACCAGTTAATTACCAGCATTGGTaGTTTTCAACTCCGCCCCTA +
Preference number: 4 (lower is better)
Translates to: ASKMIYTCCLGIKNFKPVNYQHW*FSTPPL
Trigger: TAGGGGCGGAGTTGAAAACCACCAATGCTGGTAATT...AACTGGTTTGAAATTTTTGATGCCCAGACAGCAAGTATAAATCATTTTGGAGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR TCA 90 bp TTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAAAAGATGTAGGCCAAAAATCCTaGTCAATTTACCAATGGATC +
Preference number: 4 (lower is better)
Translates to: FTNQPTNPTKHISELTKDVGQKS*SIYQWI
Trigger: GATCCATTGGTAAATTGATCAGGATTTTTGGCCTAC...ATCTTTTGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR TCA 90 bp AATAAACATCTGAAGTGGCATGAAGGGGAGTGCATACAAAAACACACAATGCCATCTTCTTTCATAATGTaGTTGAAATGCCTGCGGTTT +
Preference number: 4 (lower is better)
Translates to: NKHLKWHEGECIQKHTMPSSFIM*LKCLRF
Trigger: AAACCGCAGGCATTTCAATCACATTATGAAAGAAGA...TGGCATTGTGTGTTTTTGTATGCACTCCCCTTCATGCCACTTCAGATGTTTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR TCA 90 bp CTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAAAATTCTTTTCTTTCCTATaGGTTTGTCTAGAGGAGTGT +
Preference number: 4 (lower is better)
Translates to: LFTNQPTNPTKHISELTKFFSFL*VCLEEC
Trigger: ACACTCCTCTAGACAAACTCATAGGAAAGAAAAGAA...TTTTGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR TCA 90 bp CATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACACATTAACACATTTCTGAGCTaGCAAAAGATCTTAAGGGAG +
Preference number: 4 (lower is better)
Translates to: HEAEYLFTNQPTNPTKHINTFLS*QKILRE
Trigger: CTCCCTTAAGATCTTTTGTCAGCTCAGAAATGTGTT...AATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR GCA 90 bp AGACACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAAGATGCCAATATAATTTaGAGTGTGCTCCAAACAACT +
Preference number: 4 (lower is better)
Translates to: RHHEAEYLFTNQPTNPTKDANII*SVLQTT
Trigger: AGTTGTTTGGAGCACACTGCAAATTATATTGGCATC...TTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGTGTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR GCA 90 bp AAAAGGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCGCCAAAACATTCTTTTaGCCAGCCAATCTACTTGAA +
Preference number: 4 (lower is better)
Translates to: KRLGYFVMVSWANIYISFAKTFF*PANLLE
Trigger: TTCAAGTAGATTGGCTGGGCAAAAGAATGTTTTGGC...GAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR GCA 90 bp TCAAAAGGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATACACAATGCCAGAAGTaGTTGAAGCAGAAATCTACA +
Preference number: 4 (lower is better)
Translates to: SKGWAILSWCLGLTSIFHTQCQK*LKQKST
Trigger: TGTAGATTTCTGCTTCAAGCACTTCTGGCATTGTGT...ATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCTTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CCA 90 bp ACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACACAAATTCTGTTCAGATCTaGGTTCAAAATGAGACACGA +
Preference number: 4 (lower is better)
Translates to: TMKLNICLQTNQPTQPNTNSVQI*VQNETR
Trigger: TCGTGTCTCATTTTGAACCCAGATCTGAACAGAATT...TGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CCA 90 bp GGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCCTGGAACATGAAATCATCATGGGCTaGACAGAAACCAAATATTGG +
Preference number: 4 (lower is better)
Translates to: GYFVMVSWANIYISFLEHEIIMG*TETKYW
Trigger: CCAATATTTGGTTTCTGTCCAGCCCATGATGATTTC...ATGTTCCAGGAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp ACAAAAACAAAAACTTCTCACAGATTGGTAGCAAGCAGTTCAGACCACTTTAACGTGATTTCAACAACTTaGAACTTGATGAGGATGCGC +
Preference number: 4 (lower is better)
Translates to: TKTKTSHRLVASSSDHFNVISTT*NLMRMR
Trigger: GCGCATCCTCATCAAGTTCCAAGTTGTTGAAATCAC...GTTAAAGTGGTCTGAACTGCTTGCTACCAATCTGTGAGAAGTTTTTGTTTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CCA 90 bp CTCCAAAATGATTTATACTTGCTGTCTGGGCATCAAAAATTTCAAACCAGTTTGGAAGTCGATTCCACCTaGAGTCAAACACGTAATAGC +
Preference number: 4 (lower is better)
Translates to: LQNDLYLLSGHQKFQTSLEVDST*SQTRNS
Trigger: GCTATTACGTGTTTGACTCCAGGTGGAATCGACTTC...CAAACTGGTTTGAAATTTTTGATGCCCAGACAGCAAGTATAAATCATTTTGGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp TTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAAAAGATTCTTCTTTCATAATGTaGTTGAAATGCCTGCGGTTT +
Preference number: 4 (lower is better)
Translates to: FTNQPTNPTKHISELTKDSSFIM*LKCLRF
Trigger: AAACCGCAGGCATTTCAATCACATTATGAAAGAAGA...ATCTTTTGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR TCA 90 bp ACAAAAACTTCTCACAGATTGGTAGCAAGCAGTTCAGACCACTTTAACACTGATTTCTTTTCTTTCCTATaGGTTTGTCTAGAGGAGTGT +
Preference number: 4 (lower is better)
Translates to: TKTSHRLVASSSDHFNTDFFSFL*VCLEEC
Trigger: ACACTCCTCTAGACAAACTCATAGGAAAGAAAAGAA...ATCAGTGTTAAAGTGGTCTGAACTGCTTGCTACCAATCTGTGAGAAGTTTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp ACAAAAACAAAAACTTCTCACAGATTGGTAGCAAGCAGTTCAGACCACTTTAACTACCTGTTGTTGACTTaGAATTCCCTGAAACTGAAG +
Preference number: 4 (lower is better)
Translates to: TKTKTSHRLVASSSDHFNYLLLT*NSLKLK
Trigger: CTTCAGTTTCAGGGAATTTCAAGTCAACAACAGGTA...GTTAAAGTGGTCTGAACTGCTTGCTACCAATCTGTGAGAAGTTTTTGTTTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR TCA 90 bp GGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCCTGGAACATCTATTGGCTTGGCAGTaGACCACTTCAAATTATAAA +
Preference number: 4 (lower is better)
Translates to: GYFVMVSWANIYISFLEHLLAWQ*TTSNYK
Trigger: TTTATAATTTGAAGTGGTTCACTGCCAAGCCAATAG...ATGTTCCAGGAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR TCA 90 bp GGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCCTGGAACATCAATCCATCACCAATTaGATTACTATGAACCAAGAG +
Preference number: 4 (lower is better)
Translates to: GYFVMVSWANIYISFLEHQSITN*ITMNQE
Trigger: CTCTTGGTTCATAGTAATTCAATTGGTGATGGATTG...ATGTTCCAGGAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR GCA 90 bp ACTTGTTATTGTGGATCCTATTCACATCTTTCGGAACAACATGATCGATCTGTAACACATCGTGTAAGTTaGTGGCTGACAAAAAGATCT +
Preference number: 4 (lower is better)
Translates to: TCYCGSYSHLSEQHDRSVTHRVS*WLTKRS
Trigger: AGATCTTTTTGTCAGCCAGCAACTTACACGATGTGT...TACAGATCGATCATGTTGTTCCGAAAGATGTGAATAGGATCCACAATAACAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CCA 90 bp ACAAAAACAAAAACTTCTCACAGATTGGTAGCAAGCAGTTCAGACCACTTTAACCATCGTGTAAGTTGCTaGCTGACAAAAAGATCTGTA +
Preference number: 4 (lower is better)
Translates to: TKTKTSHRLVASSSDHFNHRVSC*LTKRSV
Trigger: TACAGATCTTTTTGTCAGCCAGCAACTTACACGATG...GTTAAAGTGGTCTGAACTGCTTGCTACCAATCTGTGAGAAGTTTTTGTTTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
3UTR CAA 72 bp TCTTTTCCCAAATTACTCTCAAAAGGCTGGGCTATTTaGTCATGGTGTCTTGGGCTAACATCTATATTTCAT +
Preference number: 4 (lower is better)
Translates to: SFPKLLSKGWAI*SWCLGLTSIFH
Trigger: ATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCTTTTGAGAGTAATTTGGGAAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR TCA 90 bp GCCTCCAAAATGATTTATACTTGCTGTCTGGGCATCAAAAATTTCAAACCAGTTGAAAGCTATCGAAGTTaGATCAAAGTGACTTTTGGA +
Preference number: 4 (lower is better)
Translates to: ASKMIYTCCLGIKNFKPVESYRS*IKVTFG
Trigger: TCCAAAAGTCACTTTGATTCAACTTCGATAGCTTTC...AACTGGTTTGAAATTTTTGATGCCCAGACAGCAAGTATAAATCATTTTGGAGGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000295900.10
CDS-3UTR GCA 90 bp ACAAAAACAAAAACTTCTCACAGATTGGTAGCAAGCAGTTCAGACCACTTTAACGATGCCAATATAATTTaGAGTGTGCTCCAAACAACT +
Preference number: 4 (lower is better)
Translates to: TKTKTSHRLVASSSDHFNDANII*SVLQTT
Trigger: AGTTGTTTGGAGCACACTGCAAATTATATTGGCATC...GTTAAAGTGGTCTGAACTGCTTGCTACCAATCTGTGAGAAGTTTTTGTTTTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000295900.10
CDS GCA 90 bp CCGTCCTCCGGCCGTGTGCGCCGTGGCGGCGGTGGCGGGTGCTGCTaGCGCTGGGGCTGCGGAGGCGGCGGCTGCTGCTGCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: PSSGRVRRGGGGGCC*RWGCGGGGCCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCCGCCGCCTCCGCAGCCCCAGCGGCAGCAGCACCCGCCACCGCCGCCACGGCGCACACGGCCGGAGGACGG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS GCA 90 bp CGTGTGCGCCGTGGCGGCGGTGGCGGGTGCTGCTGCCGCTGGGGCTaGGGAGGCGGCGGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: RVRRGGGGGCCCRWG*GGGGCCCCCCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCGCCGCCTCCGCAGCCCCAGCGGCAGCAGCACCCGCCACCGCCGCCACGGCGCACACG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS GCA 90 bp CTTTCCGCTCCCTTCGGCCGCTTGCATCCCCGGGCCCGGCCCGGCTaGCCCGCTCCTTCCTTCCGTCCGCGCGTCCGTCCGAGCGGCGGC +
Preference number: 5 (lower is better)
Translates to: LSAPFGRLHPRARPG*PAPSFRPRVRPSGG
Trigger: GCCGCCGCTCGGACGGACGCGCGGACGGAAGGAAGGAGCGGGGCAGCCGGGCCGGGCCCGGGGATGCAAGCGGCCGAAGGGAGCGGAAAG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487717.5
CDS GCA 90 bp GATTCCACGACTGTCCCAGCATCACTTCAGGACTGGGCAGAGGCCTaGGCTCCCCGACCGTCGCCATTGCGGCGGCCGAGGTGGAGGCGG +
Preference number: 5 (lower is better)
Translates to: DSTTVPASLQDWAEA*APRPSPLRRPRWRR
Trigger: CCGCCTCCACCTCGGCCGCCGCAATGGCGACGGTCGGGGAGCGCAGGCCTCTGCCCAGTCCTGAAGTGATGCTGGGACAGTCGTGGAATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS CCA 90 bp CCTCAACCCACAGATTCCACGACTGTCCCAGCATCACTTCAGGACTaGGCAGAGGCCTGCGCTCCCCGACCGTCGCCATTGCGGCGGCCG +
Preference number: 5 (lower is better)
Translates to: PQPTDSTTVPASLQD*AEACAPRPSPLRRP
Trigger: CGGCCGCCGCAATGGCGACGGTCGGGGAGCGCAGGCCTCTGCCCAGTCCTGAAGTGATGCTGGGACAGTCGTGGAATCTGTGGGTTGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS CCA 90 bp CAGGCAGGGGAGGGTGTGGAGATTCATGGACTGGAGGAGGGTCAATaGGGGCACTCCCACCTTGCTGAGCAGGGCAGCCTGGAGGCCTTG +
Preference number: 5 (lower is better)
Translates to: QAGEGVEIHGLEEGQ*GHSHLAEQGSLEAL
Trigger: CAAGGCCTCCAGGCTGCCCTGCTCAGCAAGGTGGGAGTGCCCCCATTGACCCTCCTCCAGTCCATGAATCTCCACACCCTCCCCTGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000484332.1
ENST00000484668.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS CCA 90 bp CCTCTCAGCTCGCTCCGGCGAAGTTTGCACGTCAAGCCCCCGGACTaGAGCCAGGGCGAAGTCGGAAATGCAGCCACCTATGGAGGAGCC +
Preference number: 5 (lower is better)
Translates to: PLSSLRRSLHVKPPD*SQGEVGNAATYGGA
Trigger: GGCTCCTCCATAGGTGGCTGCATTTCCGACTTCGCCCTGGCTCCAGTCCGGGGGCTTGACGTGCAAACTTCGCCGGAGCGAGCTGAGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487717.5
CDS TCA 90 bp GATCACCGACGAAATCCCGACTCTGTGGTGGAATTGGGTGCCGGGTaGGGACGATGGCAACACGCTCCTGGTCGCTTCGCGAACTCCTCC +
Preference number: 5 (lower is better)
Translates to: DHRRNPDSVVELGAG*GRWQHAPGRFANSS
Trigger: GGAGGAGTTCGCGAAGCGACCAGGAGCGTGTTGCCATCGTCCTCACCCGGCACCCAATTCCACCACAGAGTCGGGATTTCGTCGGTGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000474513.6
ENST00000647117.1
CDS CCA 90 bp CACCCCATCACGATCACCGACGAAATCCCGACTCTGTGGTGGAATTaGGTGCCGGGTGAGGACGATGGCAACACGCTCCTGGTCGCTTCG +
Preference number: 5 (lower is better)
Translates to: HPITITDEIPTLWWN*VPGEDDGNTLLVAS
Trigger: CGAAGCGACCAGGAGCGTGTTGCCATCGTCCTCACCCGGCACCCAATTCCACCACAGAGTCGGGATTTCGTCGGTGATCGTGATGGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000474513.6
ENST00000647117.1
CDS-3UTR CAA 90 bp GCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTCAAGAGAGGCTGCGGTGGTaGCTGAGAGTCCGGATGGCG +
Preference number: 5 (lower is better)
Translates to: ARQVSTLEAHRRLGKQTQERLRW*LRVRMA
Trigger: CGCCATCCGGACTCTCAGCAACCACCGCAGCCTCTC...TTGAGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp ACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTTCGCTCCGGCGAAGTTaGCACGTCAAGCCCCCGGAC +
Preference number: 5 (lower is better)
Translates to: TARQVSTLEAHRRLGKQTSLRRS*HVKPPD
Trigger: GTCCGGGGGCTTGACGTGCAAACTTCGCCGGAGCGA...AGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487717.5
CDS GCA 90 bp CCATCACGATCACCGACGAAATCCCGACTCTGTGGTGGAATTGGGTaGCGGGTGAGGACGATGGCAACACGCTCCTGGTCGCTTCGCGAA +
Preference number: 5 (lower is better)
Translates to: PSRSPTKSRLCGGIG*RVRTMATRSWSLRE
Trigger: TTCGCGAAGCGACCAGGAGCGTGTTGCCATCGTCCTCACCCGGCACCCAATTCCACCACAGAGTCGGGATTTCGTCGGTGATCGTGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000474513.6
ENST00000647117.1
CDS CCA 90 bp TGTGGTGGAATTGGGTGCCGGGTGAGGACGATGGCAACACGCTCCTaGTCGCTTCGCGAACTCCTCCGGGAGGTCGCCAAGTTTCTCTTT +
Preference number: 5 (lower is better)
Translates to: CGGIGCRVRTMATRS*SLRELLREVAKFLF
Trigger: AAAGAGAAACTTGGCGACCTCCCGGAGGAGTTCGCGAAGCGACCAGGAGCGTGTTGCCATCGTCCTCACCCGGCACCCAATTCCACCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000474513.6
ENST00000647117.1
CDS CCA 90 bp TCTCACCACCCCATCACGATCACCGACGAAATCCCGACTCTGTGGTaGAATTGGGTGCCGGGTGAGGACGATGGCAACACGCTCCTGGTC +
Preference number: 5 (lower is better)
Translates to: SHHPITITDEIPTLW*NWVPGEDDGNTLLV
Trigger: GACCAGGAGCGTGTTGCCATCGTCCTCACCCGGCACCCAATTCCACCACAGAGTCGGGATTTCGTCGGTGATCGTGATGGGGTGGTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647117.1
CDS CCA 90 bp ACCTCTCACCACCCCATCACGATCACCGACGAAATCCCGACTCTGTaGTGGAATTGGGTGCCGGGTGAGGACGATGGCAACACGCTCCTG +
Preference number: 5 (lower is better)
Translates to: TSHHPITITDEIPTL*WNWVPGEDDGNTLL
Trigger: CAGGAGCGTGTTGCCATCGTCCTCACCCGGCACCCAATTCCACCACAGAGTCGGGATTTCGTCGGTGATCGTGATGGGGTGGTGAGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647117.1
CDS-3UTR CAA 90 bp CTTCTTCAGAGGGTTGCTCGGGATGCAGCCCTGTGTTCTCTGGAAGGTTTCTGGGGCAGCCTGGAGGCCTaGGAAGACTGGGGGTGTGAG +
Preference number: 5 (lower is better)
Translates to: LLQRVARDAALCSLEGFWGSLEA*EDWGCE
Trigger: CTCACACCCCCAGTCTTCCAAGGCCTCCAGGCTGCC...CCAGAAACCTTCCAGAGAACACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp CAGGCCCTGGCCAGGGCAACGATCAGCGCCTTGGAAATTTTACCCTGTGTTCGGTTCTCCACCATGAGGTaGAGGGCGCAGCGAAGTCGA +
Preference number: 5 (lower is better)
Translates to: QALARATISALEILPCVRFSTMR*RAQRSR
Trigger: TCGACTTCGCTGCGCCCTCAACCTCATGGTGGAGAA...CCGAACACAGGGTAAAATTTCCAAGGCGCTGATCGTTGCCCTGGCCAGGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CAA 90 bp CAGGCCCTGGCCAGGGCAACGATCAGCGCCTTGGAAATTTTACCCTGTGTTCGGACTGTTCATCAGTCCTaGTGCCCCTGGGATGGTGCC +
Preference number: 5 (lower is better)
Translates to: QALARATISALEILPCVRTVHQS*CPWDGA
Trigger: GGCACCATCCCAGGGGCACAAGGACTGATGAACAGT...CCGAACACAGGGTAAAATTTCCAAGGCGCTGATCGTTGCCCTGGCCAGGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CAA 90 bp CTGGAAGGTTTCTGGTCTCCAGTTAAGGTGCCTAACTGCTGGAGAGTGACCTACGGCAGCCTGGAGGCCTaGGAAGACTGGGGGTGTGAG +
Preference number: 5 (lower is better)
Translates to: LEGFWSPVKVPNCWRVTYGSLEA*EDWGCE
Trigger: CTCACACCCCCAGTCTTCCAAGGCCTCCAGGCTGCC...GTAGGTCACTCTCCAGCAGTTAGGCACCTTAACTGGAGACCAGAAACCTTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp CTTCTTCAGAGGGTTGCTCGGGATGCAGCCCTGTGTTCTCTGGAAGGTTTCTGGGGCAGGTTTCTACCCTaGAGGCCCACAGGAGGTTGG +
Preference number: 5 (lower is better)
Translates to: LLQRVARDAALCSLEGFWGRFLP*RPTGGW
Trigger: CCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCC...CCAGAAACCTTCCAGAGAACACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS GCA 90 bp TCAAGGGCTAGCACACACAGGTGTGACAGTTCGCACTCAAGGCAGTaGCCATGCTGGGGAGGAGGAAACTCTGGCATTCACAGTGGGCTT +
Preference number: 5 (lower is better)
Translates to: SRASTHRCDSSHSRQ*PCWGGGNSGIHSGL
Trigger: AAGCCCACTGTGAATGCCAGAGTTTCCTCCTCCCCAGCATGGGCACTGCCTTGAGTGCGAACTGTCACACCTGTGTGTGCTAGCCCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643453.1
CDS CCA 90 bp TCCTGGACATGGGGGAGGAAGGAACCGAGGAAAGGCCAGAGGGCGTaGAAGGGGATGAGGATGAAGAGGACACTTGTCTGGATTGCATAC +
Preference number: 5 (lower is better)
Translates to: SWTWGRKEPRKGQRA*KGMRMKRTLVWIAY
Trigger: GTATGCAATCCAGACAAGTGTCCTCTTCATCCTCATCCCCTTCCACGCCCTCTGGCCTTTCCTCGGTTCCTTCCTCCCCCATGTCCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000477516.1
ENST00000484332.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS-3UTR CAA 90 bp GACACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACCCCCGACCGTCGCCATaGCGGCGGCCGAGGTGGAGG +
Preference number: 5 (lower is better)
Translates to: DTMKLNICLQTNQPTQPNPRPSP*RRPRWR
Trigger: CCTCCACCTCGGCCGCCGCAATGGCGACGGTCGGGG...GTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CAA 90 bp ACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTCGGGTGCAGGGCTTCTaGGTGTCGAGATCAATAACC +
Preference number: 5 (lower is better)
Translates to: TARQVSTLEAHRRLGKQTRVQGF*VSRSIT
Trigger: GGTTATTGATCTCGACACCAAGAAGCCCTGCACCCG...AGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp GCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTCAATTGCTGCTGCTGTTGTaGATGCTGCTCGAGCTGGGT +
Preference number: 5 (lower is better)
Translates to: ARQVSTLEAHRRLGKQTQLLLLL*MLLELG
Trigger: ACCCAGCTCGAGCAGCATCAACAACAGCAGCAGCAA...TTGAGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp CCTTCTTCAGAGGGTTGCTCGGGATGCAGCCCTGTGTTCTCTGGAAGGTTTCTGACTGTTCATCAGTCCTaGTGCCCCTGGGATGGTGCC +
Preference number: 5 (lower is better)
Translates to: PSSEGCSGCSPVFSGRFLTVHQS*CPWDGA
Trigger: GGCACCATCCCAGGGGCACAAGGACTGATGAACAGT...CAGAAACCTTCCAGAGAACACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS CCA 90 bp GTTTTTCAACAGACTCTTCTTTGTCATCGCCTTCGCCCTCCTCACTaGATAACCGAGAAGCTGGCTCAGTGGCAGGCAGGGGAGGGTGTG +
Preference number: 5 (lower is better)
Translates to: VFQQTLLCHRLRPPH*ITEKLAQWQAGEGV
Trigger: CACACCCTCCCCTGCCTGCCACTGAGCCAGCTTCTCGGTTATCCAGTGAGGAGGGCGAAGGCGATGACAAAGAAGAGTCTGTTGAAAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000484332.1
ENST00000484668.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS CCA 90 bp CAGTTCGCACTCAAGGCAGTGCCCATGCTGGGGAGGAGGAAACTCTaGCATTCACAGTGGGCTTTTACATCTTTGGTGGCACAGGCCATG +
Preference number: 5 (lower is better)
Translates to: QFALKAVPMLGRRKL*HSQWAFTSLVAQAM
Trigger: CATGGCCTGTGCCACCAAAGATGTAAAAGCCCACTGTGAATGCCAGAGTTTCCTCCTCCCCAGCATGGGCACTGCCTTGAGTGCGAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643453.1
CDS-3UTR CAA 90 bp AACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTCCTTTATGAGTCCCCGACCGTCGCCATaGCGGCGGCCGAGGTGGAGG +
Preference number: 5 (lower is better)
Translates to: NTDKSNSVAELDPVSFMSPRPSP*RRPRWR
Trigger: CCTCCACCTCGGCCGCCGCAATGGCGACGGTCGGGG...ACTCATAAAGGACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp ATCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGCAGGTGAAGGCAAGGTaGGCTTTGGTATTGAGGGGC +
Preference number: 5 (lower is better)
Translates to: ILVKTTARQVSTLEAHRRQVKAR*ALVLRG
Trigger: GCCCCTCAATACCAAAGCCAACCTTGCCTTCACCTG...CCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp GCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTCAAGGTGCAGGAAGCCCTTaGCCATTCAGAATCTGTCCA +
Preference number: 5 (lower is better)
Translates to: ARQVSTLEAHRRLGKQTQGAGSP*PFRICP
Trigger: TGGACAGATTCTGAATGGCAAAGGGCTTCCTGCACC...TTGAGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp ATCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGCGGGTGCAGGGCTTCTaGGTGTCGAGATCAATAACC +
Preference number: 5 (lower is better)
Translates to: ILVKTTARQVSTLEAHRRRVQGF*VSRSIT
Trigger: GGTTATTGATCTCGACACCAAGAAGCCCTGCACCCG...CCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp TCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTCGGGTGCAGGGCTTCTaGGTGTCGAGATCAATAACC +
Preference number: 5 (lower is better)
Translates to: SSLKQQPGRFLPLRPTGGRVQGF*VSRSIT
Trigger: GGTTATTGATCTCGACACCAAGAAGCCCTGCACCCG...ACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp CCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTCAAATTGCTGCTGCTGTTGTaGATGCTGCTCGAGCTGGGT +
Preference number: 5 (lower is better)
Translates to: PGRFLPLRPTGGWENRLKLLLLL*MLLELG
Trigger: ACCCAGCTCGAGCAGCATCAACAACAGCAGCAGCAA...TTTGAGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp TCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTGGTTTGCTGCTGCTGTaGTTGATGCTGCTCGAGCTG +
Preference number: 5 (lower is better)
Translates to: SSLKQQPGRFLPLRPTGGGLLLL*LMLLEL
Trigger: CAGCTCGAGCAGCATCAACAACAGCAGCAGCAAACC...ACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp GCTGAGTGGAGGTGTAACTTGTCCTCAAAAGTGTCCGCATTATTCCTCCCCGTGGGCAGGTTTCTACCCTaGAGGCCCACAGGAGGTTGG +
Preference number: 5 (lower is better)
Translates to: AEWRCNLSSKVSALFLPVGRFLP*RPTGGW
Trigger: CCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCC...CACGGGGAGGAATAATGCGGACACTTTTGAGGACAAGTTACACCTCCACTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp GCTGAGTGGAGGTGTAACTTGTCCTCAAAAGTGTCCGCATTATTCCTCCCCGTGCCCTTCTTCAGAGGGTaGCTCGGGATGCAGCCCTGT +
Preference number: 5 (lower is better)
Translates to: AEWRCNLSSKVSALFLPVPFFRG*LGMQPC
Trigger: ACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAGGG...CACGGGGAGGAATAATGCGGACACTTTTGAGGACAAGTTACACCTCCACTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS GCA 90 bp GCTAGCACACACAGGTGTGACAGTTCGCACTCAAGGCAGTGCCCATaGTGGGGAGGAGGAAACTCTGGCATTCACAGTGGGCTTTTACAT +
Preference number: 5 (lower is better)
Translates to: ASTHRCDSSHSRQCP*WGGGNSGIHSGLLH
Trigger: ATGTAAAAGCCCACTGTGAATGCCAGAGTTTCCTCCTCCCCAGCATGGGCACTGCCTTGAGTGCGAACTGTCACACCTGTGTGTGCTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643453.1
CDS CCA 90 bp CCTTGGGCCTCAAAGATTTGCTGGATTTCAATTTCTGAGGTTTCCTaGACATGGGGGAGGAAGGAACCGAGGAAAGGCCAGAGGGCGTGG +
Preference number: 5 (lower is better)
Translates to: PWASKICWISISEVS*TWGRKEPRKGQRAW
Trigger: CCACGCCCTCTGGCCTTTCCTCGGTTCCTTCCTCCCCCATGTCCAGGAAACCTCAGAAATTGAAATCCAGCAAATCTTTGAGGCCCAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000477516.1
ENST00000484332.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS-3UTR CAA 90 bp CAGGCCCTGGCCAGGGCAACGATCAGCGCCTTGGAAATTTTACCCTGTGTTCGGTTCCGCTCCTTTTCTTaGGAGGGTAGGCCAAAAATC +
Preference number: 5 (lower is better)
Translates to: QALARATISALEILPCVRFRSFS*EGRPKI
Trigger: GATTTTTGGCCTACCCTCCAAAGAAAAGGAGCGGAA...CCGAACACAGGGTAAAATTTCCAAGGCGCTGATCGTTGCCCTGGCCAGGGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CAA 90 bp ACAAAAACTTCTCACAGATTGGTAGCAAGCAGTTCAGACCACTTTAACACTGATCCCCGACCGTCGCCATaGCGGCGGCCGAGGTGGAGG +
Preference number: 5 (lower is better)
Translates to: TKTSHRLVASSSDHFNTDPRPSP*RRPRWR
Trigger: CCTCCACCTCGGCCGCCGCAATGGCGACGGTCGGGG...ATCAGTGTTAAAGTGGTCTGAACTGCTTGCTACCAATCTGTGAGAAGTTTTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp GGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCCTGGAACATCCCCGACCGTCGCCATaGCGGCGGCCGAGGTGGAGG +
Preference number: 5 (lower is better)
Translates to: GYFVMVSWANIYISFLEHPRPSP*RRPRWR
Trigger: CCTCCACCTCGGCCGCCGCAATGGCGACGGTCGGGG...ATGTTCCAGGAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp TCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTCAACAGACTCTTCTTaGTCATCGCCTTCGCCCTCC +
Preference number: 5 (lower is better)
Translates to: SSLKQQPGRFLPLRPTGGSTDSS*SSPSPS
Trigger: GGAGGGCGAAGGCGATGACAAAGAAGAGTCTGTTGA...ACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp TCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGTCAACAGACTCTTCTTaGTCATCGCCTTCGCCCTCC +
Preference number: 5 (lower is better)
Translates to: SLKQQPGRFLPLRPTGGWSTDSS*SSPSPS
Trigger: GGAGGGCGAAGGCGATGACAAAGAAGAGTCTGTTGA...CCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp GCTGAGTGGAGGTGTAACTTGTCCTCAAAAGTGTCCGCATTATTCCTCCCCGTGTTCTCCACCATGAGGTaGAGGGCGCAGCGAAGTCGA +
Preference number: 5 (lower is better)
Translates to: AEWRCNLSSKVSALFLPVFSTMR*RAQRSR
Trigger: TCGACTTCGCTGCGCCCTCAACCTCATGGTGGAGAA...CACGGGGAGGAATAATGCGGACACTTTTGAGGACAAGTTACACCTCCACTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp CCCTTCTTCAGAGGGTTGCTCGGGATGCAGCCCTGTGTTCTCTGGAAGGTTTCTATGTCGGCACAGAGTTaGTCCGGTGAGGAATACGTG +
Preference number: 5 (lower is better)
Translates to: PFFRGLLGMQPCVLWKVSMSAQS*SGEEYV
Trigger: CACGTATTCCTCACCGGACAAACTCTGTGCCGACAT...AGAAACCTTCCAGAGAACACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp TCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGATGTCGGCACAGAGTTaGTCCGGTGAGGAATACGTG +
Preference number: 5 (lower is better)
Translates to: SLKQQPGRFLPLRPTGGWMSAQS*SGEEYV
Trigger: CACGTATTCCTCACCGGACAAACTCTGTGCCGACAT...CCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp CCTTCTTCAGAGGGTTGCTCGGGATGCAGCCCTGTGTTCTCTGGAAGGTTTCTGAAACTGCCGTGGGAGTaGACAGGCAGTTCATTGGAC +
Preference number: 5 (lower is better)
Translates to: PSSEGCSGCSPVFSGRFLKLPWE*TGSSLD
Trigger: GTCCAATGAACTGCCTGTCAACTCCCACGGCAGTTT...CAGAAACCTTCCAGAGAACACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp TTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAGGTTTGCTGCTGCTGTaGTTGATGCTGCTCGAGCTG +
Preference number: 5 (lower is better)
Translates to: LKQQPGRFLPLRPTGGWEGLLLL*LMLLEL
Trigger: CAGCTCGAGCAGCATCAACAACAGCAGCAGCAAACC...TTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp GCTGAGTGGAGGTGTAACTTGTCCTCAAAAGTGTCCGCATTATTCCTCCCCGTGACTGTTCATCAGTCCTaGTGCCCCTGGGATGGTGCC +
Preference number: 5 (lower is better)
Translates to: AEWRCNLSSKVSALFLPVTVHQS*CPWDGA
Trigger: GGCACCATCCCAGGGGCACAAGGACTGATGAACAGT...CACGGGGAGGAATAATGCGGACACTTTTGAGGACAAGTTACACCTCCACTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS TCA 90 bp GGATGTAGAGACGGTGGCTGCTGCCAGATAGCTGACTCCACATTGTaGTGTCGGCACAGAGTTTGTCCGGTGAGGAATACGTGTGGAGAT +
Preference number: 5 (lower is better)
Translates to: GCRDGGCCQIADSTL*CRHRVCPVRNTCGD
Trigger: ATCTCCACACGTATTCCTCACCGGACAAACTCTGTGCCGACATCACAATGTGGAGTCAGCTATCTGGCAGCAGCCACCGTCTCTACATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000477516.1
ENST00000484332.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS TCA 90 bp GGTCATGCCGGACGTTCACCGCATTTGCTTTATTCGTCACACAGTTaGGGCCGATGCTATGGGAAGATGTTACCGTTGAGGGGTAGGGAG +
Preference number: 5 (lower is better)
Translates to: GHAGRSPHLLYSSHS*GRCYGKMLPLRGRE
Trigger: CTCCCTACCCCTCAACGGTAACATCTTCCCATAGCATCGGCCTCAACTGTGTGACGAATAAAGCAAATGCGGTGAACGTCCGGCATGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000484332.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS GCA 90 bp GTACTGGGCACTGGTGGGATTTTCTTCCATAGCTGTGCATTCAGATaGTTCTCCACCATGAGGTTGAGGGCGCAGCGAAGTCGATTCCAC +
Preference number: 5 (lower is better)
Translates to: VLGTGGIFFHSCAFR*FSTMRLRAQRSRFH
Trigger: GTGGAATCGACTTCGCTGCGCCCTCAACCTCATGGTGGAGAAGCATCTGAATGCACAGCTATGGAAGAAAATCCCACCAGTGCCCAGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000477516.1
ENST00000484332.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS GCA 90 bp GATGAAGGAGGGAACTGTTCATCAGTCCTTGTGCCCCTGGGATGGTaGCTGTGTGTTTCATGTGGACATTGTTCACGGCTGGCACTTTGG +
Preference number: 5 (lower is better)
Translates to: DEGGNCSSVLVPLGW*LCVSCGHCSRLALW
Trigger: CCAAAGTGCCAGCCGTGAACAATGTCCACATGAAACACACAGGCACCATCCCAGGGGCACAAGGACTGATGAACAGTTCCCTCCTTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000484332.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS GCA 90 bp GCAAGAGAAAACATAGCCGCGTGCTTGCTGACTCCCACACTGGCATaGCCAGTCAGGGTTCTAGATCCTTCAGGAAAGGAGCTAATCAGG +
Preference number: 5 (lower is better)
Translates to: ARENIAACLLTPTLA*PVRVLDPSGKELIR
Trigger: CCTGATTAGCTCCTTTCCTGAAGGATCTAGAACCCTGACTGGGCATGCCAGTGTGGGAGTCAGCAAGCACGCGGCTATGTTTTCTCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477516.1
CDS GCA 90 bp CTCCCAAGAACAACAGGCACTCACTTCCATAGCTGTGCATTCAGATaGTTCTCCACCATGAGGTTGAGGGCGCAGCGAAGTCGATTCCAC +
Preference number: 5 (lower is better)
Translates to: LPRTTGTHFHSCAFR*FSTMRLRAQRSRFH
Trigger: GTGGAATCGACTTCGCTGCGCCCTCAACCTCATGGTGGAGAAGCATCTGAATGCACAGCTATGGAAGTGAGTGCCTGTTGTTCTTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484668.1
CDS GCA 90 bp GATCCTGGTGCTAATCGTATCTATCCCACTGGAGGTCAAATCAGCTaGACTGGTGCCTGTTTCCTCATCCACCTCTCACCACCCCATCAC +
Preference number: 5 (lower is better)
Translates to: DPGANRIYPTGGQIS*TGACFLIHLSPPHH
Trigger: GTGATGGGGTGGTGAGAGGTGGATGAGGAAACAGGCACCAGTGCAGCTGATTTGACCTCCAGTGGGATAGATACGATTAGCACCAGGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642539.1
ENST00000647117.1
CDS CCA 90 bp GTGATGTCGGCACAGAGTTTGTCCGGTGAGGAATACGTGTGGAGATaGGTGAGGTGGTACTGGGCACTGGTGGGATTTTCTTCCATAGCT +
Preference number: 5 (lower is better)
Translates to: VMSAQSLSGEEYVWR*VRWYWALVGFSSIA
Trigger: AGCTATGGAAGAAAATCCCACCAGTGCCCAGTACCACCTCACCCATCTCCACACGTATTCCTCACCGGACAAACTCTGTGCCGACATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000477516.1
ENST00000484332.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS CCA 90 bp CACATTGTGATGTCGGCACAGAGTTTGTCCGGTGAGGAATACGTGTaGAGATGGGTGAGGTGGTACTGGGCACTGGTGGGATTTTCTTCC +
Preference number: 5 (lower is better)
Translates to: HIVMSAQSLSGEEYV*RWVRWYWALVGFSS
Trigger: GGAAGAAAATCCCACCAGTGCCCAGTACCACCTCACCCATCTCCACACGTATTCCTCACCGGACAAACTCTGTGCCGACATCACAATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000477516.1
ENST00000484332.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS CCA 90 bp ACACAGGATCCATCGCCCCTGAAGCAGCAGGCTGTGCATTTAGTGTaGTTCCATGAGCTGGTACCGATTTGCTATTTGGGGAGATGCAGG +
Preference number: 5 (lower is better)
Translates to: TQDPSPLKQQAVHLV*FHELVPICYLGRCR
Trigger: CCTGCATCTCCCCAAATAGCAAATCGGTACCAGCTCATGGAACCACACTAAATGCACAGCCTGCTGCTTCAGGGGCGATGGATCCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000477516.1
ENST00000484332.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS CCA 90 bp GCTGATGAAGGAGGGAACTGTTCATCAGTCCTTGTGCCCCTGGGATaGTGCCTGTGTGTTTCATGTGGACATTGTTCACGGCTGGCACTT +
Preference number: 5 (lower is better)
Translates to: ADEGGNCSSVLVPLG*CLCVSCGHCSRLAL
Trigger: AAGTGCCAGCCGTGAACAATGTCCACATGAAACACACAGGCACCATCCCAGGGGCACAAGGACTGATGAACAGTTCCCTCCTTCATCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS CCA 90 bp CTTTGGCTGATGAAGGAGGGAACTGTTCATCAGTCCTTGTGCCCCTaGGATGGTGCCTGTGTGTTTCATGTGGACATTGTTCACGGCTGG +
Preference number: 5 (lower is better)
Translates to: LWLMKEGTVHQSLCP*DGACVFHVDIVHGW
Trigger: CCAGCCGTGAACAATGTCCACATGAAACACACAGGCACCATCCCAGGGGCACAAGGACTGATGAACAGTTCCCTCCTTCATCAGCCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS CCA 90 bp CCTGATGAAGGAGGGAACTGTTCATCAGTCCTTGTGCCCCTGGGATaGTGCCTGTGTGTTTCATGTGGACATTGTTCACGGCTGGCACTT +
Preference number: 5 (lower is better)
Translates to: PDEGGNCSSVLVPLG*CLCVSCGHCSRLAL
Trigger: AAGTGCCAGCCGTGAACAATGTCCACATGAAACACACAGGCACCATCCCAGGGGCACAAGGACTGATGAACAGTTCCCTCCTTCATCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474112.5
ENST00000522345.2
CDS CCA 90 bp TCCTACCTGATGAAGGAGGGAACTGTTCATCAGTCCTTGTGCCCCTaGGATGGTGCCTGTGTGTTTCATGTGGACATTGTTCACGGCTGG +
Preference number: 5 (lower is better)
Translates to: SYLMKEGTVHQSLCP*DGACVFHVDIVHGW
Trigger: CCAGCCGTGAACAATGTCCACATGAAACACACAGGCACCATCCCAGGGGCACAAGGACTGATGAACAGTTCCCTCCTTCATCAGGTAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS CCA 90 bp AAGGCAGTGCCCATGCTGGGGAGGAGGAAACTCTGGCATTCACAGTaGGCTTTTACATCTTTGGTGGCACAGGCCATGAACAGACTCTTG +
Preference number: 5 (lower is better)
Translates to: KAVPMLGRRKLWHSQ*AFTSLVAQAMNRLL
Trigger: CAAGAGTCTGTTCATGGCCTGTGCCACCAAAGATGTAAAAGCCCACTGTGAATGCCAGAGTTTCCTCCTCCCCAGCATGGGCACTGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643453.1
CDS CCA 90 bp AGCACACACAGGTGTGACAGTTCGCACTCAAGGCAGTGCCCATGCTaGGGAGGAGGAAACTCTGGCATTCACAGTGGGCTTTTACATCTT +
Preference number: 5 (lower is better)
Translates to: STHRCDSSHSRQCPC*GGGNSGIHSGLLHL
Trigger: AAGATGTAAAAGCCCACTGTGAATGCCAGAGTTTCCTCCTCCCCAGCATGGGCACTGCCTTGAGTGCGAACTGTCACACCTGTGTGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643453.1
CDS-3UTR CAA 90 bp CAGGCCCTGGCCAGGGCAACGATCAGCGCCTTGGAAATTTTACCCTGTGTTCGGGACAGAAACCAAATATaGGCATGTCTTCCCGACAGA +
Preference number: 5 (lower is better)
Translates to: QALARATISALEILPCVRDRNQI*ACLPDR
Trigger: TCTGTCGGGAAGACATGCCAATATTTGGTTTCTGTC...CCGAACACAGGGTAAAATTTCCAAGGCGCTGATCGTTGCCCTGGCCAGGGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CAA 90 bp TTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAACTTGCACTGCCTCCTTaGCTTTTGGACAGAGAAGGG +
Preference number: 5 (lower is better)
Translates to: LKQQPGRFLPLRPTGGWELALPP*LLDREG
Trigger: CCCTTCTCTGTCCAAAAGCAAAGGAGGCAGTGCAAG...TTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp GCTGAGTGGAGGTGTAACTTGTCCTCAAAAGTGTCCGCATTATTCCTCCCCGTGCCACTGGAAGAACGGTaGCTTCCACTTGCACTGCCT +
Preference number: 5 (lower is better)
Translates to: AEWRCNLSSKVSALFLPVPLEER*LPLALP
Trigger: AGGCAGTGCAAGTGGAAGCAACCGTTCTTCCAGTGG...CACGGGGAGGAATAATGCGGACACTTTTGAGGACAAGTTACACCTCCACTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp GCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTCAAATGGGGAACTCTACTTaGCTGAATGGGATGCATTGG +
Preference number: 5 (lower is better)
Translates to: ARQVSTLEAHRRLGKQTQMGNST*LNGMHW
Trigger: CCAATGCATCCCATTCAGCAAAGTAGAGTTCCCCAT...TTGAGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp TCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGGACACTTGTCTGGATaGCATACTGCACACAGGATC +
Preference number: 5 (lower is better)
Translates to: SLKQQPGRFLPLRPTGGWGHLSG*HTAHRI
Trigger: GATCCTGTGTGCAGTATGCAATCCAGACAAGTGTCC...CCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp TCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTGGACACTTGTCTGGATaGCATACTGCACACAGGATC +
Preference number: 5 (lower is better)
Translates to: SSLKQQPGRFLPLRPTGGGHLSG*HTAHRI
Trigger: GATCCTGTGTGCAGTATGCAATCCAGACAAGTGTCC...ACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp TTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAATTCACGGCTGGCACTTaGGCAACCTTTGTGGGTTTG +
Preference number: 5 (lower is better)
Translates to: LKQQPGRFLPLRPTGGWEFTAGT*ATFVGL
Trigger: CAAACCCACAAAGGTTGCCAAAGTGCCAGCCGTGAA...TTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp CTCACTGCTAGAGACATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCGGCGTCAGGGACGTGCCTTaGGCTGATGAAGGAGGGAAC +
Preference number: 5 (lower is better)
Translates to: LTARDIASGKSSLKQQPGVRDVP*ADEGGN
Trigger: GTTCCCTCCTTCATCAGCCAAAGGCACGTCCCTGAC...GCCGGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATGTCTCTAGCAGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp ATCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGGCCCAGCCAATCTACTaGAAGAGTGGCTCTGTGATA +
Preference number: 5 (lower is better)
Translates to: ILVKTTARQVSTLEAHRRAQPIY*KSGSVI
Trigger: TATCACAGAGCCACTCTTCAAGTAGATTGGCTGGGC...CCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp TCCAGAGTGCTGAGTGGAGGTGTAACTTGTCCTCAAAAGTGTCCGCATTATTCCCCCTTCTTCAGAGGGTaGCTCGGGATGCAGCCCTGT +
Preference number: 5 (lower is better)
Translates to: SRVLSGGVTCPQKCPHYSPFFRG*LGMQPC
Trigger: ACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAGGG...GGAATAATGCGGACACTTTTGAGGACAAGTTACACCTCCACTCAGCACTCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS TCA 90 bp TCCATCGCCCCTGAAGCAGCAGGCTGTGCATTTAGTGTGGTTCCATaGGCTGGTACCGATTTGCTATTTGGGGAGATGCAGGTAGATGAG +
Preference number: 5 (lower is better)
Translates to: SIAPEAAGCAFSVVP*AGTDLLFGEMQVDE
Trigger: CTCATCTACCTGCATCTCCCCAAATAGCAAATCGGTACCAGCTCATGGAACCACACTAAATGCACAGCCTGCTGCTTCAGGGGCGATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000477516.1
ENST00000484332.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS TCA 90 bp GAGCTAATCAGGAAAGACAGAACTGCCTCTGAGTACCGGAGGCTGTaGAGCATGAGAGTGACAATGCCTAGCCCTGAGCGTCATGGAAGA +
Preference number: 5 (lower is better)
Translates to: ELIRKDRTASEYRRL*SMRVTMPSPERHGR
Trigger: TCTTCCATGACGCTCAGGGCTAGGCATTGTCACTCTCATGCTTCACAGCCTCCGGTACTCAGAGGCAGTTCTGTCTTTCCTGATTAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477516.1
CDS TCA 90 bp CCTCTTGGCCATACTCACATTCTACCATGGGGAACTCTACTTTGCTaGATGGGATGCATTGGCCTGGTGTTCCCCCTGAGCTGCAGTTTC +
Preference number: 5 (lower is better)
Translates to: PLGHTHILPWGTLLC*MGCIGLVFPLSCSF
Trigger: GAAACTGCAGCTCAGGGGGAACACCAGGCCAATGCATCCCATTCAGCAAAGTAGAGTTCCCCATGGTAGAATGTGAGTATGGCCAAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475897.1
CDS GCA 90 bp TGGAAGGGGATGAGGATGAAGAGGACACTTGTCTGGATTGCATACTaGACACAGGATCCATCGCCCCTGAAGCAGCAGGCTGTGCATTTA +
Preference number: 5 (lower is better)
Translates to: WKGMRMKRTLVWIAY*TQDPSPLKQQAVHL
Trigger: TAAATGCACAGCCTGCTGCTTCAGGGGCGATGGATCCTGTGTGCAGTATGCAATCCAGACAAGTGTCCTCTTCATCCTCATCCCCTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000477516.1
ENST00000484332.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS GCA 90 bp ACGTGCCTTTGGCTGATGAAGGAGGGAACTGTTCATCAGTCCTTGTaGCCCTGGGATGGTGCCTGTGTGTTTCATGTGGACATTGTTCAC +
Preference number: 5 (lower is better)
Translates to: TCLWLMKEGTVHQSL*PWDGACVFHVDIVH
Trigger: GTGAACAATGTCCACATGAAACACACAGGCACCATCCCAGGGGCACAAGGACTGATGAACAGTTCCCTCCTTCATCAGCCAAAGGCACGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS GCA 90 bp GATCCTGGTGCTAATCGTATCTATCCCACTGGAGGTCAAATCAGCTaGACTGGTGCCTGTTTCCTCATCCACCTCTCACCACAGACAGTG +
Preference number: 5 (lower is better)
Translates to: DPGANRIYPTGGQIS*TGACFLIHLSPQTV
Trigger: CACTGTCTGTGGTGAGAGGTGGATGAGGAAACAGGCACCAGTGCAGCTGATTTGACCTCCAGTGGGATAGATACGATTAGCACCAGGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643464.1
CDS CCA 90 bp CCCTGGGATGGTGCCTGTGTGTTTCATGTGGACATTGTTCACGGCTaGCACTTTGGCAACCTTTGTGGGTTTGCTGCTGCTGTTGTTGAT +
Preference number: 5 (lower is better)
Translates to: PWDGACVFHVDIVHG*HFGNLCGFAAAVVD
Trigger: ATCAACAACAGCAGCAGCAAACCCACAAAGGTTGCCAAAGTGCCAGCCGTGAACAATGTCCACATGAAACACACAGGCACCATCCCAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000484332.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS CCA 90 bp TTCATCAGTCCTTGTGCCCCTGGGATGGTGCCTGTGTGTTTCATGTaGACATTGTTCACGGCTGGCACTTTGGCAACCTTTGTGGGTTTG +
Preference number: 5 (lower is better)
Translates to: FISPCAPGMVPVCFM*TLFTAGTLATFVGL
Trigger: CAAACCCACAAAGGTTGCCAAAGTGCCAGCCGTGAACAATGTCCACATGAAACACACAGGCACCATCCCAGGGGCACAAGGACTGATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000484332.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS CCA 90 bp AGAAGGAAAATACTGAAGTGGGAGGAACGGCCAAAGGCGGCTTGCTaGATGAGCTATGTCTTCTTTCCAGTGGAGCTTTCAGCTCCTGCG +
Preference number: 5 (lower is better)
Translates to: RRKILKWEERPKAAC*MSYVFFPVELSAPA
Trigger: CGCAGGAGCTGAAAGCTCCACTGGAAAGAAGACATAGCTCATCCAGCAAGCCGCCTTTGGCCGTTCCTCCCACTTCAGTATTTTCCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475897.1
ENST00000484332.1
CDS CCA 90 bp GATATCCTGATGAAGGAGGGAACTGTTCATCAGTCCTTGTGCCCCTaGGATGGTGCCTGTGTGTTTCATGTGGACATTGTTCACGGCTGG +
Preference number: 5 (lower is better)
Translates to: DILMKEGTVHQSLCP*DGACVFHVDIVHGW
Trigger: CCAGCCGTGAACAATGTCCACATGAAACACACAGGCACCATCCCAGGGGCACAAGGACTGATGAACAGTTCCCTCCTTCATCAGGATATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522345.2
CDS-3UTR CAA 90 bp TCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGTTCCGCTCCTTTTCTTaGGAGGGTAGGCCAAAAATC +
Preference number: 5 (lower is better)
Translates to: SLKQQPGRFLPLRPTGGWFRSFS*EGRPKI
Trigger: GATTTTTGGCCTACCCTCCAAAGAAAAGGAGCGGAA...CCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CAA 90 bp CCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTCAAAGTTAAGGAATGTGTCTaGCATGTCAAAGACCGGGTG +
Preference number: 5 (lower is better)
Translates to: PGRFLPLRPTGGWENRLKVKECV*HVKDRV
Trigger: CACCCGGTCTTTGACATGCAAGACACATTCCTTAAC...TTTGAGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp GCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCGAGAGGCTGCGGTGGTaGCTGAGAGTCCGGATGGCG +
Preference number: 5 (lower is better)
Translates to: AVQTTLTLIKAIRWLNLIERLRW*LRVRMA
Trigger: CGCCATCCGGACTCTCAGCAACCACCGCAGCCTCTC...GATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp TTGGTAGCAAGCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGGCAGCCTGGAGGCCTaGGAAGACTGGGGGTGTGAG +
Preference number: 5 (lower is better)
Translates to: LVASSSDHFNTDKSNSVAGSLEA*EDWGCE
Trigger: CTCACACCCCCAGTCTTCCAAGGCCTCCAGGCTGCC...AGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGCTTGCTACCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp CATTGCTATCAAAATCTAAAGCCTAATTCCCTTCTTCAGAGGGTTGCTCGGGATGGCAGCCTGGAGGCCTaGGAAGACTGGGGGTGTGAG +
Preference number: 5 (lower is better)
Translates to: HCYQNLKPNSLLQRVARDGSLEA*EDWGCE
Trigger: CTCACACCCCCAGTCTTCCAAGGCCTCCAGGCTGCC...ATCCCGAGCAACCCTCTGAAGAAGGGAATTAGGCTTTAGATTTTGATAGCAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp GCTGAGTGGAGGTGTAACTTGTCCTCAAAAGTGTCCGCATTATTCCTCCCCGTGATGTCGGCACAGAGTTaGTCCGGTGAGGAATACGTG +
Preference number: 5 (lower is better)
Translates to: AEWRCNLSSKVSALFLPVMSAQS*SGEEYV
Trigger: CACGTATTCCTCACCGGACAAACTCTGTGCCGACAT...CACGGGGAGGAATAATGCGGACACTTTTGAGGACAAGTTACACCTCCACTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp CCTTCTTCAGAGGGTTGCTCGGGATGCAGCCCTGTGTTCTCTGGAAGGTTTCTGTTACCAGAAGACTCCTaGGGCCTCAAAGATTTGCTG +
Preference number: 5 (lower is better)
Translates to: PSSEGCSGCSPVFSGRFLLPEDS*GLKDLL
Trigger: CAGCAAATCTTTGAGGCCCAAGGAGTCTTCTGGTAA...CAGAAACCTTCCAGAGAACACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp ATCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTGTTTCATGTGGACATaGTTCACGGCTGGCACTTTG +
Preference number: 5 (lower is better)
Translates to: ILVKTTARQVSTLEAHRRCFMWT*FTAGTL
Trigger: CAAAGTGCCAGCCGTGAACAATGTCCACATGAAACA...CCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp AGTGGCATGAAGGGGAGTGCATACAAAAACACACAATGCCAGAAGTGCTTGAAGGGCAGGTTTCTACCCTaGAGGCCCACAGGAGGTTGG +
Preference number: 5 (lower is better)
Translates to: SGMKGSAYKNTQCQKCLKGRFLP*RPTGGW
Trigger: CCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCC...CTTCAAGCACTTCTGGCATTGTGTGTTTTTGTATGCACTCCCCTTCATGCCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CAA 90 bp CTCCCACCCTCCCCCGACCCAATTTGGCCTTCCTTTCTCAAAACTAGCTTGCATGCCCAGCCAATCTACTaGAAGAGTGGCTCTGTGATA +
Preference number: 5 (lower is better)
Translates to: LPPSPDPIWPSFLKTSLHAQPIY*KSGSVI
Trigger: TATCACAGAGCCACTCTTCAAGTAGATTGGCTGGGC...ATGCAAGCTAGTTTTGAGAAAGGAAGGCCAAATTGGGTCGGGGGAGGGTGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CAA 90 bp GCTGAGTGGAGGTGTAACTTGTCCTCAAAAGTGTCCGCATTATTCCTCCCCGTGCTCCCCCGACCCAATTaGGCCTTCCTTTCTCAAAAC +
Preference number: 5 (lower is better)
Translates to: AEWRCNLSSKVSALFLPVLPRPN*AFLSQN
Trigger: GTTTTGAGAAAGGAAGGCCAAATTGGGTCGGGGGAG...CACGGGGAGGAATAATGCGGACACTTTTGAGGACAAGTTACACCTCCACTCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CAA 90 bp CTGGAAGGTTTCTGGTCTCCAGTTAAGGTGCCTAACTGCTGGAGAGTGACCTACCTCCCCCGACCCAATTaGGCCTTCCTTTCTCAAAAC +
Preference number: 5 (lower is better)
Translates to: LEGFWSPVKVPNCWRVTYLPRPN*AFLSQN
Trigger: GTTTTGAGAAAGGAAGGCCAAATTGGGTCGGGGGAG...GTAGGTCACTCTCCAGCAGTTAGGCACCTTAACTGGAGACCAGAAACCTTCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CAA 90 bp CCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTCAAAGCAACGATCAGCGCCTaGGAAATTTTACCCTGTGTT +
Preference number: 5 (lower is better)
Translates to: PGRFLPLRPTGGWENRLKATISA*EILPCV
Trigger: AACACAGGGTAAAATTTCCAAGGCGCTGATCGTTGC...TTTGAGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CAA 90 bp CTGGAAGGTTTCTGGTCTCCAGTTAAGGTGCCTAACTGCTGGAGAGTGACCTACTTGGCAACAGAACTCTaGCAGGAAGACAGCTGCCCT +
Preference number: 5 (lower is better)
Translates to: LEGFWSPVKVPNCWRVTYLATEL*QEDSCP
Trigger: AGGGCAGCTGTCTTCCTGCAAGAGTTCTGTTGCCAA...GTAGGTCACTCTCCAGCAGTTAGGCACCTTAACTGGAGACCAGAAACCTTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS TCA 90 bp TTCACAGAGGGTGTCATGATTCTACCATGGGGAACTCTACTTTGCTaGATGGGATGCATTGGCCTGGTGTTCCCCCTGAGCTGCAGTTTC +
Preference number: 5 (lower is better)
Translates to: FTEGVMILPWGTLLC*MGCIGLVFPLSCSF
Trigger: GAAACTGCAGCTCAGGGGGAACACCAGGCCAATGCATCCCATTCAGCAAAGTAGAGTTCCCCATGGTAGAATCATGACACCCTCTGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000484332.1
ENST00000487717.5
ENST00000488239.1
ENST00000522345.2
ENST00000674280.1
CDS TCA 90 bp CCAGAAGACTCCTTGGGCCTCAAAGATTTGCTGGATTTCAATTTCTaGGGTTTCCTGGACATGGGGGAGGAAGGAACCGAGGAAAGGCCA +
Preference number: 5 (lower is better)
Translates to: PEDSLGLKDLLDFNF*GFLDMGEEGTEERP
Trigger: TGGCCTTTCCTCGGTTCCTTCCTCCCCCATGTCCAGGAAACCTCAGAAATTGAAATCCAGCAAATCTTTGAGGCCCAAGGAGTCTTCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000484332.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS TCA 90 bp ATTCGTCACACAGTTGAGGCCGATGCTATGGGAAGATGTTACCGTTaGGGGGTAGGGAGGCCCAGAGTGAGCCACACAGTTTTTCCTAAA +
Preference number: 5 (lower is better)
Translates to: IRHTVEADAMGRCYR*GVGRPRVSHTVFPK
Trigger: TTTAGGAAAAACTGTGTGGCTCACTCTGGGCCTCCCTACCCCTCAACGGTAACATCTTCCCATAGCATCGGCCTCAACTGTGTGACGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000484332.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS GCA 90 bp GATCCTGGTGCTAATCGTATCTATCCCACTGGAGGTCAAATCAGCTaGACTGGTGCCTGTTTCCTCATCCACCTCTCACCACCTAAACGT +
Preference number: 5 (lower is better)
Translates to: DPGANRIYPTGGQIS*TGACFLIHLSPPKR
Trigger: ACGTTTAGGTGGTGAGAGGTGGATGAGGAAACAGGCACCAGTGCAGCTGATTTGACCTCCAGTGGGATAGATACGATTAGCACCAGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000474513.6
ENST00000650280.1
CDS GCA 90 bp TGTCTTCAGGTTTCTTTTCCAGAGTGGGCGGTGCAGGAAGCCCTTTaGCATTCAGAATCTGTCCAGGTGAAGGCAAGGTTGGCTTTGGTA +
Preference number: 5 (lower is better)
Translates to: CLQVSFPEWAVQEAL*HSESVQVKARLALV
Trigger: TACCAAAGCCAACCTTGCCTTCACCTGGACAGATTCTGAATGGCAAAGGGCTTCCTGCACCGCCCACTCTGGAAAAGAAACCTGAAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295900.10
ENST00000466529.1
ENST00000474112.5
ENST00000484332.1
ENST00000487717.5
ENST00000488239.1
ENST00000522345.2
ENST00000674280.1
CDS GCA 90 bp GAGCTTTCAGCTCCTGCGCAGAAGGGCTGCTTTGGAGAGGCGTCTTaGTACCTTCCATTCACAGAATTTGGTTGTGCTTCATTGCACACT +
Preference number: 5 (lower is better)
Translates to: ELSAPAQKGCFGEAS*YLPFTEFGCASLHT
Trigger: AGTGTGCAATGAAGCACAACCAAATTCTGTGAATGGAAGGTAGCAAGACGCCTCTCCAAAGCAGCCCTTCTGCGCAGGAGCTGAAAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475897.1
ENST00000484332.1
CDS GCA 90 bp GGAAGAAGGAAAATACTGAAGTGGGAGGAACGGCCAAAGGCGGCTTaGTGGATGAGCTATGTCTTCTTTCCAGTGGAGCTTTCAGCTCCT +
Preference number: 5 (lower is better)
Translates to: GRRKILKWEERPKAA*WMSYVFFPVELSAP
Trigger: AGGAGCTGAAAGCTCCACTGGAAAGAAGACATAGCTCATCCAGCAAGCCGCCTTTGGCCGTTCCTCCCACTTCAGTATTTTCCTTCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475897.1
ENST00000484332.1
CDS-3UTR CAA 90 bp CAGGCCCTGGCCAGGGCAACGATCAGCGCCTTGGAAATTTTACCCTGTGTTCGGAGATGCCAATATAATTaGCAGTGTGCTCCAAACAAC +
Preference number: 5 (lower is better)
Translates to: QALARATISALEILPCVRRCQYN*QCAPNN
Trigger: GTTGTTTGGAGCACACTGCAAATTATATTGGCATCT...CCGAACACAGGGTAAAATTTCCAAGGCGCTGATCGTTGCCCTGGCCAGGGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295900.10
CDS-3UTR CAA 90 bp AATCTAAAGCCTAATTCCCTTCTTCAGAGGGTTGCTCGGGATGCAGCCCTGTGTTCCTTCCCAGGAAGTTaGGAAGCCTCAACCCACAGA +
Preference number: 5 (lower is better)
Translates to: NLKPNSLLQRVARDAALCSFPGS*EASTHR
Trigger: TCTGTGGGTTGAGGCTTCCAAACTTCCTGGGAAGGA...ACACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAGGGAATTAGGCTTTAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp TCCAGAGTGCTGAGTGGAGGTGTAACTTGTCCTCAAAAGTGTCCGCATTATTCCACGGCCAAAGGCGGCTaGCTGGATGAGCTATGTCTT +
Preference number: 5 (lower is better)
Translates to: SRVLSGGVTCPQKCPHYSTAKGG*LDELCL
Trigger: AAGACATAGCTCATCCAGCAAGCCGCCTTTGGCCGT...GGAATAATGCGGACACTTTTGAGGACAAGTTACACCTCCACTCAGCACTCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp TCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTGGTGATTTCAACAACTaGGAACTTGATGAGGATGCG +
Preference number: 5 (lower is better)
Translates to: SSLKQQPGRFLPLRPTGGGDFNN*ELDEDA
Trigger: CGCATCCTCATCAAGTTCCAAGTTGTTGAAATCACC...ACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp GCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTCAAAGCTGCAGTTTCTCTTaGGGTGATTTCAACAACTTG +
Preference number: 5 (lower is better)
Translates to: ARQVSTLEAHRRLGKQTQSCSFS*GDFNNL
Trigger: CAAGTTGTTGAAATCACCCAAAGAGAAACTGCAGCT...TTGAGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp CTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAAAAGAGAGGCTGCGGTGGTaGCTGAGAGTCCGGATGGCG +
Preference number: 5 (lower is better)
Translates to: LFTNQPTNPTKHISELTKERLRW*LRVRMA
Trigger: CGCCATCCGGACTCTCAGCAACCACCGCAGCCTCTC...TTTTGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CAA 90 bp GTACTCACTGCTAGAGACATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCTTCTCCACCATGAGGTaGAGGGCGCAGCGAAGTCGA +
Preference number: 5 (lower is better)
Translates to: VLTARDIASGKSSLKQQPFSTMR*RAQRSR
Trigger: TCGACTTCGCTGCGCCCTCAACCTCATGGTGGAGAA...GGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATGTCTCTAGCAGTGAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp GCTGAGTGGAGGTGTAACTTGTCCTCAAAAGTGTCCGCATTATTCCTCCCCGTGATCACACTCATCCTCTaGATGGATTCAGCAGGGCTC +
Preference number: 5 (lower is better)
Translates to: AEWRCNLSSKVSALFLPVITLIL*MDSAGL
Trigger: GAGCCCTGCTGAATCCATCAAGAGGATGAGTGTGAT...CACGGGGAGGAATAATGCGGACACTTTTGAGGACAAGTTACACCTCCACTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp AATCTAAAGCCTAATTCCCTTCTTCAGAGGGTTGCTCGGGATGCAGCCCTGTGTTTGGCAACAGAACTCTaGCAGGAAGACAGCTGCCCT +
Preference number: 5 (lower is better)
Translates to: NLKPNSLLQRVARDAALCLATEL*QEDSCP
Trigger: AGGGCAGCTGTCTTCCTGCAAGAGTTCTGTTGCCAA...ACACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAGGGAATTAGGCTTTAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS GCA 90 bp CGGCTAATAACACATCAAATCGTTTTCTTCTACCCTGGACAGCCCTaGGCTGGGTTAAGGAATGTGTCTTGCATGTCAAAGACCGGGTGC +
Preference number: 5 (lower is better)
Translates to: RLITHQIVFFYPGQP*AGLRNVSCMSKTGC
Trigger: GCACCCGGTCTTTGACATGCAAGACACATTCCTTAACCCAGCGCAGGGCTGTCCAGGGTAGAAGAAAACGATTTGATGTGTTATTAGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295900.10
ENST00000466529.1
ENST00000472569.1
ENST00000474112.5
ENST00000484332.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS GCA 90 bp AGGAAGAGGAGGAGGAAGAGTGAACCAACAGTGGGGAACTGTTTTTaGGTTTCTTTCCTGAGCCGCCACTGGTACTGCTACTGGCATTTT +
Preference number: 5 (lower is better)
Translates to: RKRRRKSEPTVGNCF*VSFLSRHWYCYWHF
Trigger: AAAATGCCAGTAGCAGTACCAGTGGCGGCTCAGGAAAGAAACGCAAAAACAGTTCCCCACTGTTGGTTCACTCTTCCTCCTCCTCTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000484332.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS GCA 90 bp AGTCAAACACGTAATAGCCTCTTCCTATCTGCCGGCTCCCAAATGTaGAAAACTGCAAGAGAAAACATAGCCGCGTGCTTGCTGACTCCC +
Preference number: 5 (lower is better)
Translates to: SQTRNSLFLSAGSQM*KTARENIAACLLTP
Trigger: GGGAGTCAGCAAGCACGCGGCTATGTTTTCTCTTGCAGTTTTGCACATTTGGGAGCCGGCAGATAGGAAGAGGCTATTACGTGTTTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477516.1
CDS GCA 90 bp TATGTCTTCTTTCCAGTGGAGCTTTCAGCTCCTGCGCAGAAGGGCTaGTTTGGAGAGGCGTCTTGCTACCTTCCATTCACAGAATTTGGT +
Preference number: 5 (lower is better)
Translates to: YVFFPVELSAPAQKG*FGEASCYLPFTEFG
Trigger: ACCAAATTCTGTGAATGGAAGGTAGCAAGACGCCTCTCCAAAGCAGCCCTTCTGCGCAGGAGCTGAAAGCTCCACTGGAAAGAAGACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475897.1
ENST00000484332.1
CDS GCA 90 bp TCCATTTCCTACCTGATGAAGGAGGGAACTGTTCATCAGTCCTTGTaGCCCTGGGATGGTGCCTGTGTGTTTCATGTGGACATTGTTCAC +
Preference number: 5 (lower is better)
Translates to: SISYLMKEGTVHQSL*PWDGACVFHVDIVH
Trigger: GTGAACAATGTCCACATGAAACACACAGGCACCATCCCAGGGGCACAAGGACTGATGAACAGTTCCCTCCTTCATCAGGTAGGAAATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS CCA 90 bp TCATCTCTGAAGGTGGGAGAAAGAGTTGGAGGGCCTGGCTTACCTTaGAAGACTGGGGGTGTGAGGTTTAGGTTTACTAGCTACAAAAGG +
Preference number: 5 (lower is better)
Translates to: SSLKVGERVGGPGLP*KTGGVRFRFTSYKR
Trigger: CCTTTTGTAGCTAGTAAACCTAAACCTCACACCCCCAGTCTTCCAAGGTAAGCCAGGCCCTCCAACTCTTTCTCCCACCTTCAGAGATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466529.1
ENST00000472569.1
CDS CCA 90 bp GGGCTGCTTTGGAGAGGCGTCTTGCTACCTTCCATTCACAGAATTTaGTTGTGCTTCATTGCACACTTGCTACTGCAGGCTTGCATCATG +
Preference number: 5 (lower is better)
Translates to: GLLWRGVLLPSIHRI*LCFIAHLLLQACIM
Trigger: CATGATGCAAGCCTGCAGTAGCAAGTGTGCAATGAAGCACAACCAAATTCTGTGAATGGAAGGTAGCAAGACGCCTCTCCAAAGCAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475897.1
ENST00000484332.1
CDS CCA 90 bp GACCGGGTGCAGGGCTTCTTGGTGTCGAGATCAATAACCCCACAGTaGATGTCAGGATCAAACTCTCTTTCTGTCAAAAGAACACAGGCA +
Preference number: 5 (lower is better)
Translates to: DRVQGFLVSRSITPQ*MSGSNSLSVKRTQA
Trigger: TGCCTGTGTTCTTTTGACAGAAAGAGAGTTTGATCCTGACATCCACTGTGGGGTTATTGATCTCGACACCAAGAAGCCCTGCACCCGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472569.1
CDS CCA 90 bp GGATGGTTTCTCACAGTTCCACCTGGCTCACTTTATTCCCCTCTCTaGTCTCTCTGGCCTCTACAGACTTTTGAACTTGTGCCTCCTCTT +
Preference number: 5 (lower is better)
Translates to: GWFLTVPPGSLYSPL*SLWPLQTFELVPPL
Trigger: AAGAGGAGGCACAAGTTCAAAAGTCTGTAGAGGCCAGAGAGACCAGAGAGGGGAATAAAGTGAGCCAGGTGGAACTGTGAGAAACCATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643464.1
CDS-3UTR CAA 90 bp CAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTAGGCAACGTTTCTCATaGAGCACCCCCGCCCCCACT +
Preference number: 5 (lower is better)
Translates to: QTTLTLIKAIRWLNLIQCRQRFS*STPAPT
Trigger: AGTGGGGGCGGGGGTGCTCAATGAGAAACGTTGCCT...ACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000295900.10
CDS-3UTR CAA 90 bp GTACTCACTGCTAGAGACATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCACGGCCAAAGGCGGCTaGCTGGATGAGCTATGTCTT +
Preference number: 5 (lower is better)
Translates to: VLTARDIASGKSSLKQQPTAKGG*LDELCL
Trigger: AAGACATAGCTCATCCAGCAAGCCGCCTTTGGCCGT...GGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATGTCTCTAGCAGTGAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp CCTTCTTCAGAGGGTTGCTCGGGATGCAGCCCTGTGTTCTCTGGAAGGTTTCTGAGCTGCAGTTTCTCTTaGGGTGATTTCAACAACTTG +
Preference number: 5 (lower is better)
Translates to: PSSEGCSGCSPVFSGRFLSCSFS*GDFNNL
Trigger: CAAGTTGTTGAAATCACCCAAAGAGAAACTGCAGCT...CAGAAACCTTCCAGAGAACACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp TCCAGAGTGCTGAGTGGAGGTGTAACTTGTCCTCAAAAGTGTCCGCATTATTCCGGTGCAGGAAGCCCTTaGCCATTCAGAATCTGTCCA +
Preference number: 5 (lower is better)
Translates to: SRVLSGGVTCPQKCPHYSGAGSP*PFRICP
Trigger: TGGACAGATTCTGAATGGCAAAGGGCTTCCTGCACC...GGAATAATGCGGACACTTTTGAGGACAAGTTACACCTCCACTCAGCACTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp TCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTCCTTTTCCCTGGTTTaGTTTTTGTGCTCGGCTAAT +
Preference number: 5 (lower is better)
Translates to: SSLKQQPGRFLPLRPTGGSFSLV*FLCSAN
Trigger: ATTAGCCGAGCACAAAAACAAAACCAGGGAAAAGGA...ACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp TTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAAAAGATGGCAGCCTGGAGGCCTaGGAAGACTGGGGGTGTGAG +
Preference number: 5 (lower is better)
Translates to: FTNQPTNPTKHISELTKDGSLEA*EDWGCE
Trigger: CTCACACCCCCAGTCTTCCAAGGCCTCCAGGCTGCC...ATCTTTTGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CAA 90 bp GGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCCTGGTTCTCCACCATGAGGTaGAGGGCGCAGCGAAGTCGA +
Preference number: 5 (lower is better)
Translates to: GWAILSWCLGLTSIFHSWFSTMR*RAQRSR
Trigger: TCGACTTCGCTGCGCCCTCAACCTCATGGTGGAGAA...CCAGGAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp CATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGCACTTTGGCAACCTTaGTGGGTTTGCTGCTGCTGT +
Preference number: 5 (lower is better)
Translates to: HSFREILVKTTARQVSTLALWQP*WVCCCC
Trigger: ACAGCAGCAGCAAACCCACAAAGGTTGCCAAAGTGC...AAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp ACGATCAGCGCCTTGGAAATTTTACCCTGTGTTCGGCAACTTCGTGTGTTCTTCTTCACGGCTGGCACTTaGGCAACCTTTGTGGGTTTG +
Preference number: 5 (lower is better)
Translates to: TISALEILPCVRQLRVFFFTAGT*ATFVGL
Trigger: CAAACCCACAAAGGTTGCCAAAGTGCCAGCCGTGAA...GAAGAACACACGAAGTTGCCGAACACAGGGTAAAATTTCCAAGGCGCTGATCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CAA 90 bp CAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTCCCTTCTTCAGAGGGTaGCTCGGGATGCAGCCCTGT +
Preference number: 5 (lower is better)
Translates to: QTTLTLIKAIRWLNLIQCPFFRG*LGMQPC
Trigger: ACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAGGG...ACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp CTGGAAGGTTTCTGGTCTCCAGTTAAGGTGCCTAACTGCTGGAGAGTGACCTACAAAGGCTGGGCTATTTaGTCATGGTGTCTTGGGCTA +
Preference number: 5 (lower is better)
Translates to: LEGFWSPVKVPNCWRVTYKGWAI*SWCLGL
Trigger: TAGCCCAAGACACCATGACAAAATAGCCCAGCCTTT...GTAGGTCACTCTCCAGCAGTTAGGCACCTTAACTGGAGACCAGAAACCTTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS TCA 90 bp TTGCGTTTCTTTCCTGAGCCGCCACTGGTACTGCTACTGGCATTTTaGCAGTTAGTGCTGTTACCAGAAGACTCCTTGGGCCTCAAAGAT +
Preference number: 5 (lower is better)
Translates to: LRFFPEPPLVLLLAF*QLVLLPEDSLGLKD
Trigger: ATCTTTGAGGCCCAAGGAGTCTTCTGGTAACAGCACTAACTGTCAAAATGCCAGTAGCAGTACCAGTGGCGGCTCAGGAAAGAAACGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000484332.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS TCA 90 bp GAGAAAGAGTTGGAGGGCCTGGCTTACCTTGGAAGACTGGGGGTGTaGGGTTTAGGTTTACTAGCTACAAAAGGCTTTGATTCGGAAGGA +
Preference number: 5 (lower is better)
Translates to: EKELEGLAYLGRLGV*GLGLLATKGFDSEG
Trigger: TCCTTCCGAATCAAAGCCTTTTGTAGCTAGTAAACCTAAACCTCACACCCCCAGTCTTCCAAGGTAAGCCAGGCCCTCCAACTCTTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466529.1
ENST00000472569.1
CDS GCA 90 bp AGGCGTCTTGCTACCTTCCATTCACAGAATTTGGTTGTGCTTCATTaGACACTTGCTACTGCAGGCTTGCATCATGATTTGGGTCTGCCC +
Preference number: 5 (lower is better)
Translates to: RRLATFHSQNLVVLH*TLATAGLHHDLGLP
Trigger: GGGCAGACCCAAATCATGATGCAAGCCTGCAGTAGCAAGTGTGCAATGAAGCACAACCAAATTCTGTGAATGGAAGGTAGCAAGACGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475897.1
ENST00000484332.1
CDS-3UTR CAA 90 bp GCTGAGTGGAGGTGTAACTTGTCCTCAAAAGTGTCCGCATTATTCCTCCCCGTGGGTGATTTCAACAACTaGGAACTTGATGAGGATGCG +
Preference number: 5 (lower is better)
Translates to: AEWRCNLSSKVSALFLPVGDFNN*ELDEDA
Trigger: CGCATCCTCATCAAGTTCCAAGTTGTTGAAATCACC...CACGGGGAGGAATAATGCGGACACTTTTGAGGACAAGTTACACCTCCACTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp GGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCCTGGCGGGTGCAGGGCTTCTaGGTGTCGAGATCAATAACC +
Preference number: 5 (lower is better)
Translates to: GWAILSWCLGLTSIFHSWRVQGF*VSRSIT
Trigger: GGTTATTGATCTCGACACCAAGAAGCCCTGCACCCG...CCAGGAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp TTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAATCCCTGGTTTTGTTTTaGTGCTCGGCTAATAACACA +
Preference number: 5 (lower is better)
Translates to: LKQQPGRFLPLRPTGGWESLVLF*CSANNT
Trigger: TGTGTTATTAGCCGAGCACAAAAACAAAACCAGGGA...TTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp ACAAAAACAAAAACTTCTCACAGATTGGTAGCAAGCAGTTCAGACCACTTTAACGAGAGGCTGCGGTGGTaGCTGAGAGTCCGGATGGCG +
Preference number: 5 (lower is better)
Translates to: TKTKTSHRLVASSSDHFNERLRW*LRVRMA
Trigger: CGCCATCCGGACTCTCAGCAACCACCGCAGCCTCTC...GTTAAAGTGGTCTGAACTGCTTGCTACCAATCTGTGAGAAGTTTTTGTTTTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp ACTTGTTATTGTGGATCCTATTCACATCTTTCGGAACAACATGATCGATCTGTAGAGAGGCTGCGGTGGTaGCTGAGAGTCCGGATGGCG +
Preference number: 5 (lower is better)
Translates to: TCYCGSYSHLSEQHDRSVERLRW*LRVRMA
Trigger: CGCCATCCGGACTCTCAGCAACCACCGCAGCCTCTC...TACAGATCGATCATGTTGTTCCGAAAGATGTGAATAGGATCCACAATAACAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CAA 90 bp CTGGAAGGTTTCTGGTCTCCAGTTAAGGTGCCTAACTGCTGGAGAGTGACCTACACTGCTACTGGCATTTaGACAGTTAGTGCTGTTACC +
Preference number: 5 (lower is better)
Translates to: LEGFWSPVKVPNCWRVTYTATGI*TVSAVT
Trigger: GGTAACAGCACTAACTGTCAAAATGCCAGTAGCAGT...GTAGGTCACTCTCCAGCAGTTAGGCACCTTAACTGGAGACCAGAAACCTTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp TTGGTAGCAAGCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGTCAGGGACGTGCCTTaGGCTGATGAAGGAGGGAAC +
Preference number: 5 (lower is better)
Translates to: LVASSSDHFNTDKSNSVAVRDVP*ADEGGN
Trigger: GTTCCCTCCTTCATCAGCCAAAGGCACGTCCCTGAC...AGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGCTTGCTACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp TTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAAAACTTCTCACAGATaGGTAGCAAGCAGTTCAGAC +
Preference number: 5 (lower is better)
Translates to: LKQQPGRFLPLRPTGGWEKTSHR*VASSSD
Trigger: GTCTGAACTGCTTGCTACCAATCTGTGAGAAGTTTT...TTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp GCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTCAAAATGTAGAGAGTGCCTaGGAAACATTTAAGTGTATC +
Preference number: 5 (lower is better)
Translates to: ARQVSTLEAHRRLGKQTQNVESA*ETFKCI
Trigger: GATACACTTAAATGTTTCCAAGGCACTCTCTACATT...TTGAGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CAA 90 bp CTCACTGCTAGAGACATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCGGCGCAACGATCAGCGCCTaGGAAATTTTACCCTGTGTT +
Preference number: 5 (lower is better)
Translates to: LTARDIASGKSSLKQQPGATISA*EILPCV
Trigger: AACACAGGGTAAAATTTCCAAGGCGCTGATCGTTGC...GCCGGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATGTCTCTAGCAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CAA 90 bp AACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTCCTTTATGAGTCGCAGAAGGGCTGCTTaGGAGAGGCGTCTTGCTACC +
Preference number: 5 (lower is better)
Translates to: NTDKSNSVAELDPVSFMSRRRAA*ERRLAT
Trigger: GGTAGCAAGACGCCTCTCCAAAGCAGCCCTTCTGCG...ACTCATAAAGGACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484332.1
CDS TCA 90 bp GAACTCTACTTTGCTGAATGGGATGCATTGGCCTGGTGTTCCCCCTaGGCTGCAGTTTCTCTTTGGGTGATTTCAACAACTTGGAACTTG +
Preference number: 5 (lower is better)
Translates to: ELYFAEWDALAWCSP*AAVSLWVISTTWNL
Trigger: CAAGTTCCAAGTTGTTGAAATCACCCAAAGAGAAACTGCAGCTCAGGGGGAACACCAGGCCAATGCATCCCATTCAGCAAAGTAGAGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000475897.1
ENST00000484332.1
ENST00000487717.5
ENST00000488239.1
ENST00000522345.2
ENST00000674280.1
CDS TCA 90 bp TTTGGTTGTGCTTCATTGCACACTTGCTACTGCAGGCTTGCATCATaGTTTGGGTCTGCCCACCAACTCCAAATATGCTCCATGTTTGGG +
Preference number: 5 (lower is better)
Translates to: FGCASLHTCYCRLAS*FGSAHQLQICSMFG
Trigger: CCCAAACATGGAGCATATTTGGAGTTGGTGGGCAGACCCAAATCATGATGCAAGCCTGCAGTAGCAAGTGTGCAATGAAGCACAACCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475897.1
ENST00000484332.1
CDS-3UTR CAA 90 bp CATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACACATTAGGCAACGTTTCTCATaGAGCACCCCCGCCCCCACT +
Preference number: 5 (lower is better)
Translates to: HEAEYLFTNQPTNPTKHIRQRFS*STPAPT
Trigger: AGTGGGGGCGGGGGTGCTCAATGAGAAACGTTGCCT...AATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CAA 90 bp CCTTCTTCAGAGGGTTGCTCGGGATGCAGCCCTGTGTTCTCTGGAAGGTTTCTGTTTTTCCCAAACTCCTaGAAACTTTCGTCCAATTCT +
Preference number: 5 (lower is better)
Translates to: PSSEGCSGCSPVFSGRFLFFPNS*KLSSNS
Trigger: AGAATTGGACGAAAGTTTCAAGGAGTTTGGGAAAAA...CAGAAACCTTCCAGAGAACACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp TTGGTAGCAAGCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTACGGCCAAAGGCGGCTaGCTGGATGAGCTATGTCTT +
Preference number: 5 (lower is better)
Translates to: LVASSSDHFNTDKSNSVATAKGG*LDELCL
Trigger: AAGACATAGCTCATCCAGCAAGCCGCCTTTGGCCGT...AGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGCTTGCTACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp CTATCCCTTGACATTTGTTCATGTTCTATACAGCAGCCAACACAAAGTCCAGCTCCACTGGAAGAACGGTaGCTTCCACTTGCACTGCCT +
Preference number: 5 (lower is better)
Translates to: LSLDICSCSIQQPTQSPAPLEER*LPLALP
Trigger: AGGCAGTGCAAGTGGAAGCAACCGTTCTTCCAGTGG...AGCTGGACTTTGTGTTGGCTGCTGTATAGAACATGAACAAATGTCAAGGGATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CAA 90 bp TCCAGAGTGCTGAGTGGAGGTGTAACTTGTCCTCAAAAGTGTCCGCATTATTCCATGGGGAACTCTACTTaGCTGAATGGGATGCATTGG +
Preference number: 5 (lower is better)
Translates to: SRVLSGGVTCPQKCPHYSMGNST*LNGMHW
Trigger: CCAATGCATCCCATTCAGCAAAGTAGAGTTCCCCAT...GGAATAATGCGGACACTTTTGAGGACAAGTTACACCTCCACTCAGCACTCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp CATTGCTATCAAAATCTAAAGCCTAATTCCCTTCTTCAGAGGGTTGCTCGGGATCAGGTGAAGGCAAGGTaGGCTTTGGTATTGAGGGGC +
Preference number: 5 (lower is better)
Translates to: HCYQNLKPNSLLQRVARDQVKAR*ALVLRG
Trigger: GCCCCTCAATACCAAAGCCAACCTTGCCTTCACCTG...ATCCCGAGCAACCCTCTGAAGAAGGGAATTAGGCTTTAGATTTTGATAGCAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp ACGATCAGCGCCTTGGAAATTTTACCCTGTGTTCGGCAACTTCGTGTGTTCTTCGGACGTTCACCGCATTaGCTTTATTCGTCACACAGT +
Preference number: 5 (lower is better)
Translates to: TISALEILPCVRQLRVFFGRSPH*LYSSHS
Trigger: ACTGTGTGACGAATAAAGCAAATGCGGTGAACGTCC...GAAGAACACACGAAGTTGCCGAACACAGGGTAAAATTTCCAAGGCGCTGATCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CAA 90 bp CCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGGAAAACAGACTCAAATTCATTCCTGGAACATaGCTATCAAAATCTAAAGCC +
Preference number: 5 (lower is better)
Translates to: PGRFLPLRPTGGWENRLKFIPGT*LSKSKA
Trigger: GGCTTTAGATTTTGATAGCAATGTTCCAGGAATGAA...TTTGAGTCTGTTTTCCCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp TCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTGAGGCCCACAGGAGGTTGGCCAGCTGAGATGCTCTaGATTATGTGTACAAATTAT +
Preference number: 5 (lower is better)
Translates to: SLKQQPGRFLPLRPTGGWPAEML*IMCTNY
Trigger: ATAATTTGTACACATAATCAAGAGCATCTCAGCTGG...CCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS TCA 90 bp AACAATTCTTCTCTTAGAGTGCCCTGTCTCCTAAAACCAAGGAAATaGACAGGGTCTGATGATGCCCACCTACAGCCAGCGTTTAGGTCA +
Preference number: 5 (lower is better)
Translates to: NNSSLRVPCLLKPRK*TGSDDAHLQPAFRS
Trigger: TGACCTAAACGCTGGCTGTAGGTGGGCATCATCAGACCCTGTTCATTTCCTTGGTTTTAGGAGACAGGGCACTCTAAGAGAAGAATTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650280.1
CDS GCA 90 bp CACAGAATTTGGTTGTGCTTCATTGCACACTTGCTACTGCAGGCTTaGATCATGATTTGGGTCTGCCCACCAACTCCAAATATGCTCCAT +
Preference number: 5 (lower is better)
Translates to: HRIWLCFIAHLLLQA*IMIWVCPPTPNMLH
Trigger: ATGGAGCATATTTGGAGTTGGTGGGCAGACCCAAATCATGATGCAAGCCTGCAGTAGCAAGTGTGCAATGAAGCACAACCAAATTCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475897.1
ENST00000484332.1
CDS GCA 90 bp CTTTGGAGAGGCGTCTTGCTACCTTCCATTCACAGAATTTGGTTGTaGTTCATTGCACACTTGCTACTGCAGGCTTGCATCATGATTTGG +
Preference number: 5 (lower is better)
Translates to: LWRGVLLPSIHRIWL*FIAHLLLQACIMIW
Trigger: CCAAATCATGATGCAAGCCTGCAGTAGCAAGTGTGCAATGAAGCACAACCAAATTCTGTGAATGGAAGGTAGCAAGACGCCTCTCCAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475897.1
ENST00000484332.1
CDS CCA 90 bp CACTTTCTTTTCTTTCCTATGAGTTTGTCTAGAGGAGTGTGTGAGTaGGAAAAACTGCCGTGGGAGTTGACAGGCAGTTCATTGGACTGG +
Preference number: 5 (lower is better)
Translates to: HFLFFPMSLSRGVCE*EKLPWELTGSSLDW
Trigger: CCAGTCCAATGAACTGCCTGTCAACTCCCACGGCAGTTTTTCCCACTCACACACTCCTCTAGACAAACTCATAGGAAAGAAAAGAAAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000484332.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS CCA 90 bp TTGTGCTTCATTGCACACTTGCTACTGCAGGCTTGCATCATGATTTaGGTCTGCCCACCAACTCCAAATATGCTCCATGTTTGGGCTTAT +
Preference number: 5 (lower is better)
Translates to: LCFIAHLLLQACIMI*VCPPTPNMLHVWAY
Trigger: ATAAGCCCAAACATGGAGCATATTTGGAGTTGGTGGGCAGACCCAAATCATGATGCAAGCCTGCAGTAGCAAGTGTGCAATGAAGCACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475897.1
ENST00000484332.1
CDS-3UTR CAA 90 bp GACACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACTCCTTCCCAGGAAGTTaGGAAGCCTCAACCCACAGA +
Preference number: 5 (lower is better)
Translates to: DTMKLNICLQTNQPTQPNSFPGS*EASTHR
Trigger: TCTGTGGGTTGAGGCTTCCAAACTTCCTGGGAAGGA...GTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CAA 90 bp CAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTTCCTTCCCAGGAAGTTaGGAAGCCTCAACCCACAGA +
Preference number: 5 (lower is better)
Translates to: QTTLTLIKAIRWLNLIQCSFPGS*EASTHR
Trigger: TCTGTGGGTTGAGGCTTCCAAACTTCCTGGGAAGGA...ACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp TTGGTAGCAAGCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTTCCTTCCCAGGAAGTTaGGAAGCCTCAACCCACAGA +
Preference number: 5 (lower is better)
Translates to: LVASSSDHFNTDKSNSVASFPGS*EASTHR
Trigger: TCTGTGGGTTGAGGCTTCCAAACTTCCTGGGAAGGA...AGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGCTTGCTACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp ACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACACAACGGCCAAAGGCGGCTaGCTGGATGAGCTATGTCTT +
Preference number: 5 (lower is better)
Translates to: TMKLNICLQTNQPTQPNTTAKGG*LDELCL
Trigger: AAGACATAGCTCATCCAGCAAGCCGCCTTTGGCCGT...TGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CAA 90 bp CATTGCTATCAAAATCTAAAGCCTAATTCCCTTCTTCAGAGGGTTGCTCGGGATCTTGCACTGCCTCCTTaGCTTTTGGACAGAGAAGGG +
Preference number: 5 (lower is better)
Translates to: HCYQNLKPNSLLQRVARDLALPP*LLDREG
Trigger: CCCTTCTCTGTCCAAAAGCAAAGGAGGCAGTGCAAG...ATCCCGAGCAACCCTCTGAAGAAGGGAATTAGGCTTTAGATTTTGATAGCAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp CTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAAAACCACTGGAAGAACGGTaGCTTCCACTTGCACTGCCT +
Preference number: 5 (lower is better)
Translates to: LFTNQPTNPTKHISELTKPLEER*LPLALP
Trigger: AGGCAGTGCAAGTGGAAGCAACCGTTCTTCCAGTGG...TTTTGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CAA 90 bp ACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTCCTTTATGAGTACTCCACTGGAAGAACGGTaGCTTCCACTTGCACTGCCT +
Preference number: 5 (lower is better)
Translates to: TDKSNSVAELDPVSFMSTPLEER*LPLALP
Trigger: AGGCAGTGCAAGTGGAAGCAACCGTTCTTCCAGTGG...AGTACTCATAAAGGACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp AGACACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACAGGTGAAGGCAAGGTaGGCTTTGGTATTGAGGGGC +
Preference number: 5 (lower is better)
Translates to: RHHEAEYLFTNQPTNPTKQVKAR*ALVLRG
Trigger: GCCCCTCAATACCAAAGCCAACCTTGCCTTCACCTG...TTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CAA 90 bp AACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTCCTTTATGAGTCAGGTGAAGGCAAGGTaGGCTTTGGTATTGAGGGGC +
Preference number: 5 (lower is better)
Translates to: NTDKSNSVAELDPVSFMSQVKAR*ALVLRG
Trigger: GCCCCTCAATACCAAAGCCAACCTTGCCTTCACCTG...ACTCATAAAGGACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp CATTGCTATCAAAATCTAAAGCCTAATTCCCTTCTTCAGAGGGTTGCTCGGGATGGTGCAGGAAGCCCTTaGCCATTCAGAATCTGTCCA +
Preference number: 5 (lower is better)
Translates to: HCYQNLKPNSLLQRVARDGAGSP*PFRICP
Trigger: TGGACAGATTCTGAATGGCAAAGGGCTTCCTGCACC...ATCCCGAGCAACCCTCTGAAGAAGGGAATTAGGCTTTAGATTTTGATAGCAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp CTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAAAACGGGTGCAGGGCTTCTaGGTGTCGAGATCAATAACC +
Preference number: 5 (lower is better)
Translates to: LFTNQPTNPTKHISELTKRVQGF*VSRSIT
Trigger: GGTTATTGATCTCGACACCAAGAAGCCCTGCACCCG...TTTTGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CAA 90 bp CTATCCCTTGACATTTGTTCATGTTCTATACAGCAGCCAACACAAAGTCCAGCTTCAACAGACTCTTCTTaGTCATCGCCTTCGCCCTCC +
Preference number: 5 (lower is better)
Translates to: LSLDICSCSIQQPTQSPASTDSS*SSPSPS
Trigger: GGAGGGCGAAGGCGATGACAAAGAAGAGTCTGTTGA...AGCTGGACTTTGTGTTGGCTGCTGTATAGAACATGAACAAATGTCAAGGGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CAA 90 bp TTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAAAAGATTTCTCCACCATGAGGTaGAGGGCGCAGCGAAGTCGA +
Preference number: 5 (lower is better)
Translates to: FTNQPTNPTKHISELTKDFSTMR*RAQRSR
Trigger: TCGACTTCGCTGCGCCCTCAACCTCATGGTGGAGAA...ATCTTTTGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CAA 90 bp GTACTCACTGCTAGAGACATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCTTACCAGAAGACTCCTaGGGCCTCAAAGATTTGCTG +
Preference number: 5 (lower is better)
Translates to: VLTARDIASGKSSLKQQPLPEDS*GLKDLL
Trigger: CAGCAAATCTTTGAGGCCCAAGGAGTCTTCTGGTAA...GGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATGTCTCTAGCAGTGAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp GTACTCACTGCTAGAGACATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCGGACGTTCACCGCATTaGCTTTATTCGTCACACAGT +
Preference number: 5 (lower is better)
Translates to: VLTARDIASGKSSLKQQPGRSPH*LYSSHS
Trigger: ACTGTGTGACGAATAAAGCAAATGCGGTGAACGTCC...GGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATGTCTCTAGCAGTGAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp CCAAAACATTCTTTTGCCCAGCCAATCTACTTGAAGAGTGGCTCTGTGATATACAAACTGCCGTGGGAGTaGACAGGCAGTTCATTGGAC +
Preference number: 5 (lower is better)
Translates to: PKHSFAQPIYLKSGSVIYKLPWE*TGSSLD
Trigger: GTCCAATGAACTGCCTGTCAACTCCCACGGCAGTTT...GTATATCACAGAGCCACTCTTCAAGTAGATTGGCTGGGCAAAAGAATGTTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp TTGGTAGCAAGCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTAAACTGCCGTGGGAGTaGACAGGCAGTTCATTGGAC +
Preference number: 5 (lower is better)
Translates to: LVASSSDHFNTDKSNSVAKLPWE*TGSSLD
Trigger: GTCCAATGAACTGCCTGTCAACTCCCACGGCAGTTT...AGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGCTTGCTACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp AGACACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAATTGCTGCTGCTGTTGTaGATGCTGCTCGAGCTGGGT +
Preference number: 5 (lower is better)
Translates to: RHHEAEYLFTNQPTNPTKLLLLL*MLLELG
Trigger: ACCCAGCTCGAGCAGCATCAACAACAGCAGCAGCAA...TTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CAA 90 bp AATAAACATCTGAAGTGGCATGAAGGGGAGTGCATACAAAAACACACAATGCCAGGTTTGCTGCTGCTGTaGTTGATGCTGCTCGAGCTG +
Preference number: 5 (lower is better)
Translates to: NKHLKWHEGECIQKHTMPGLLLL*LMLLEL
Trigger: CAGCTCGAGCAGCATCAACAACAGCAGCAGCAAACC...TGGCATTGTGTGTTTTTGTATGCACTCCCCTTCATGCCACTTCAGATGTTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CAA 90 bp CATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACACATTACTGTTCATCAGTCCTaGTGCCCCTGGGATGGTGCC +
Preference number: 5 (lower is better)
Translates to: HEAEYLFTNQPTNPTKHITVHQS*CPWDGA
Trigger: GGCACCATCCCAGGGGCACAAGGACTGATGAACAGT...AATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CAA 90 bp ACAAAAACTTCTCACAGATTGGTAGCAAGCAGTTCAGACCACTTTAACACTGATGTCAGGGACGTGCCTTaGGCTGATGAAGGAGGGAAC +
Preference number: 5 (lower is better)
Translates to: TKTSHRLVASSSDHFNTDVRDVP*ADEGGN
Trigger: GTTCCCTCCTTCATCAGCCAAAGGCACGTCCCTGAC...ATCAGTGTTAAAGTGGTCTGAACTGCTTGCTACCAATCTGTGAGAAGTTTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp TCAAAAGGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATGTCAGGGACGTGCCTTaGGCTGATGAAGGAGGGAAC +
Preference number: 5 (lower is better)
Translates to: SKGWAILSWCLGLTSIFHVRDVP*ADEGGN
Trigger: GTTCCCTCCTTCATCAGCCAAAGGCACGTCCCTGAC...ATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCTTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp ACAAAAACAAAAACTTCTCACAGATTGGTAGCAAGCAGTTCAGACCACTTTAACGGCAGGTTTCTACCCTaGAGGCCCACAGGAGGTTGG +
Preference number: 5 (lower is better)
Translates to: TKTKTSHRLVASSSDHFNGRFLP*RPTGGW
Trigger: CCAACCTCCTGTGGGCCTCAAGGGTAGAAACCTGCC...GTTAAAGTGGTCTGAACTGCTTGCTACCAATCTGTGAGAAGTTTTTGTTTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp CTGGAAGGTTTCTGGTCTCCAGTTAAGGTGCCTAACTGCTGGAGAGTGACCTACCTACCTGTTGTTGACTaGAAATTCCCTGAAACTGAA +
Preference number: 5 (lower is better)
Translates to: LEGFWSPVKVPNCWRVTYLPVVD*KFPETE
Trigger: TTCAGTTTCAGGGAATTTCAAGTCAACAACAGGTAG...GTAGGTCACTCTCCAGCAGTTAGGCACCTTAACTGGAGACCAGAAACCTTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CAA 90 bp AATCTAAAGCCTAATTCCCTTCTTCAGAGGGTTGCTCGGGATGCAGCCCTGTGTATAAAATTACCAGCATaGGTGGTTTTCAACTCCGCC +
Preference number: 5 (lower is better)
Translates to: NLKPNSLLQRVARDAALCIKLPA*VVFNSA
Trigger: GGCGGAGTTGAAAACCACCAATGCTGGTAATTTTAT...ACACAGGGCTGCATCCCGAGCAACCCTCTGAAGAAGGGAATTAGGCTTTAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CAA 90 bp GCTGAGTGGAGGTGTAACTTGTCCTCAAAAGTGTCCGCATTATTCCTCCCCGTGATTCACAGAATTTGGTaGTGCTTCATTGCACACTTG +
Preference number: 5 (lower is better)
Translates to: AEWRCNLSSKVSALFLPVIHRIW*CFIAHL
Trigger: CAAGTGTGCAATGAAGCACAACCAAATTCTGTGAAT...CACGGGGAGGAATAATGCGGACACTTTTGAGGACAAGTTACACCTCCACTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484332.1
CDS GCA 90 bp TTCATTGCACACTTGCTACTGCAGGCTTGCATCATGATTTGGGTCTaGCCACCAACTCCAAATATGCTCCATGTTTGGGCTTATGTAACA +
Preference number: 5 (lower is better)
Translates to: FIAHLLLQACIMIWV*PPTPNMLHVWAYVT
Trigger: TGTTACATAAGCCCAAACATGGAGCATATTTGGAGTTGGTGGGCAGACCCAAATCATGATGCAAGCCTGCAGTAGCAAGTGTGCAATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484332.1
CDS-3UTR CAA 90 bp TCAAAAGGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATACGGCCAAAGGCGGCTaGCTGGATGAGCTATGTCTT +
Preference number: 5 (lower is better)
Translates to: SKGWAILSWCLGLTSIFHTAKGG*LDELCL
Trigger: AAGACATAGCTCATCCAGCAAGCCGCCTTTGGCCGT...ATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCTTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp GTAGCAAGCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAAAACGGTTGCTTCCACTaGCACTGCCTCCTTTGCTTT +
Preference number: 5 (lower is better)
Translates to: VASSSDHFNTDKSNSVAENGCFH*HCLLCF
Trigger: AAAGCAAAGGAGGCAGTGCAAGTGGAAGCAACCGTT...TTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGCTTGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp CCAAAACATTCTTTTGCCCAGCCAATCTACTTGAAGAGTGGCTCTGTGATATACAACGGTTGCTTCCACTaGCACTGCCTCCTTTGCTTT +
Preference number: 5 (lower is better)
Translates to: PKHSFAQPIYLKSGSVIYNGCFH*HCLLCF
Trigger: AAAGCAAAGGAGGCAGTGCAAGTGGAAGCAACCGTT...GTATATCACAGAGCCACTCTTCAAGTAGATTGGCTGGGCAAAAGAATGTTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp GTACTCACTGCTAGAGACATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCGGTGATTTCAACAACTaGGAACTTGATGAGGATGCG +
Preference number: 5 (lower is better)
Translates to: VLTARDIASGKSSLKQQPGDFNN*ELDEDA
Trigger: CGCATCCTCATCAAGTTCCAAGTTGTTGAAATCACC...GGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATGTCTCTAGCAGTGAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp ACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACACAGGTGCAGGAAGCCCTTaGCCATTCAGAATCTGTCCA +
Preference number: 5 (lower is better)
Translates to: TMKLNICLQTNQPTQPNTGAGSP*PFRICP
Trigger: TGGACAGATTCTGAATGGCAAAGGGCTTCCTGCACC...TGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CAA 90 bp TATCTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACATCAACAGACTCTTCTTaGTCATCGCCTTCGCCCTCC +
Preference number: 5 (lower is better)
Translates to: YLFTNQPTNPTKHISELTSTDSS*SSPSPS
Trigger: GGAGGGCGAAGGCGATGACAAAGAAGAGTCTGTTGA...TGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CAA 90 bp CTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAAAAATGTCGGCACAGAGTTaGTCCGGTGAGGAATACGTG +
Preference number: 5 (lower is better)
Translates to: LFTNQPTNPTKHISELTKMSAQS*SGEEYV
Trigger: CACGTATTCCTCACCGGACAAACTCTGTGCCGACAT...TTTTGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CAA 90 bp CATTGCTATCAAAATCTAAAGCCTAATTCCCTTCTTCAGAGGGTTGCTCGGGATATCACACTCATCCTCTaGATGGATTCAGCAGGGCTC +
Preference number: 5 (lower is better)
Translates to: HCYQNLKPNSLLQRVARDITLIL*MDSAGL
Trigger: GAGCCCTGCTGAATCCATCAAGAGGATGAGTGTGAT...ATCCCGAGCAACCCTCTGAAGAAGGGAATTAGGCTTTAGATTTTGATAGCAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp CTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAAAAAAACTGCCGTGGGAGTaGACAGGCAGTTCATTGGAC +
Preference number: 5 (lower is better)
Translates to: LFTNQPTNPTKHISELTKKLPWE*TGSSLD
Trigger: GTCCAATGAACTGCCTGTCAACTCCCACGGCAGTTT...TTTTGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAG
46% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CAA 90 bp AGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAAAACTGCCGTGGGAGTaGACAGGCAGTTCATTGGAC +
Preference number: 5 (lower is better)
Translates to: SSDHFNTDKSNSVAELDPKLPWE*TGSSLD
Trigger: GTCCAATGAACTGCCTGTCAACTCCCACGGCAGTTT...TGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp TTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAAAAGATGGTTTGCTGCTGCTGTaGTTGATGCTGCTCGAGCTG +
Preference number: 5 (lower is better)
Translates to: FTNQPTNPTKHISELTKDGLLLL*LMLLEL
Trigger: CAGCTCGAGCAGCATCAACAACAGCAGCAGCAAACC...ATCTTTTGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CAA 90 bp GGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCCTGGAACATGGTTTGCTGCTGCTGTaGTTGATGCTGCTCGAGCTG +
Preference number: 5 (lower is better)
Translates to: GYFVMVSWANIYISFLEHGLLLL*LMLLEL
Trigger: CAGCTCGAGCAGCATCAACAACAGCAGCAGCAAACC...ATGTTCCAGGAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp CTGGAACATTGCTATCAAAATCTAAAGCCTAATTCCCTTCTTCAGAGGGTTGCTGCACTTTGGCAACCTTaGTGGGTTTGCTGCTGCTGT +
Preference number: 5 (lower is better)
Translates to: LEHCYQNLKPNSLLQRVAALWQP*WVCCCC
Trigger: ACAGCAGCAGCAAACCCACAAAGGTTGCCAAAGTGC...AGCAACCCTCTGAAGAAGGGAATTAGGCTTTAGATTTTGATAGCAATGTTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp AGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGCACTTTGGCAACCTTaGTGGGTTTGCTGCTGCTGT +
Preference number: 5 (lower is better)
Translates to: SSDHFNTDKSNSVAELDPALWQP*WVCCCC
Trigger: ACAGCAGCAGCAAACCCACAAAGGTTGCCAAAGTGC...TGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp ACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACACATTCACGGCTGGCACTTaGGCAACCTTTGTGGGTTTG +
Preference number: 5 (lower is better)
Translates to: TMKLNICLQTNQPTQPNTFTAGT*ATFVGL
Trigger: CAAACCCACAAAGGTTGCCAAAGTGCCAGCCGTGAA...TGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CAA 90 bp AATAAACATCTGAAGTGGCATGAAGGGGAGTGCATACAAAAACACACAATGCCATTCACGGCTGGCACTTaGGCAACCTTTGTGGGTTTG +
Preference number: 5 (lower is better)
Translates to: NKHLKWHEGECIQKHTMPFTAGT*ATFVGL
Trigger: CAAACCCACAAAGGTTGCCAAAGTGCCAGCCGTGAA...TGGCATTGTGTGTTTTTGTATGCACTCCCCTTCATGCCACTTCAGATGTTTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CAA 90 bp ACAAAAACAAAAACTTCTCACAGATTGGTAGCAAGCAGTTCAGACCACTTTAACACTGTTCATCAGTCCTaGTGCCCCTGGGATGGTGCC +
Preference number: 5 (lower is better)
Translates to: TKTKTSHRLVASSSDHFNTVHQS*CPWDGA
Trigger: GGCACCATCCCAGGGGCACAAGGACTGATGAACAGT...GTTAAAGTGGTCTGAACTGCTTGCTACCAATCTGTGAGAAGTTTTTGTTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp CATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTCAATGCCAGAAGTGCTaGAAGCAGAAATCTACACTT +
Preference number: 5 (lower is better)
Translates to: HSFREILVKTTARQVSTLQCQKC*KQKSTL
Trigger: AAGTGTAGATTTCTGCTTCAAGCACTTCTGGCATTG...AAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CAA 90 bp CATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTATAAAATTACCAGCATaGGTGGTTTTCAACTCCGCC +
Preference number: 5 (lower is better)
Translates to: HSFREILVKTTARQVSTLIKLPA*VVFNSA
Trigger: GGCGGAGTTGAAAACCACCAATGCTGGTAATTTTAT...AAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CAA 90 bp GTAGCAAGCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAATGCTTCATTGCACACTaGCTACTGCAGGCTTGCATC +
Preference number: 5 (lower is better)
Translates to: VASSSDHFNTDKSNSVAECFIAH*LLQACI
Trigger: GATGCAAGCCTGCAGTAGCAAGTGTGCAATGAAGCA...TTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGCTTGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484332.1
CDS CCA 90 bp AAAATTTCCTATTATTGGAATTGTCTTCAGGTTTCTTTTCCAGAGTaGGCGGTGCAGGAAGCCCTTTGCCATTCAGAATCTGTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: KISYYWNCLQVSFPE*AVQEALCHSESVQV
Trigger: CACCTGGACAGATTCTGAATGGCAAAGGGCTTCCTGCACCGCCCACTCTGGAAAAGAAACCTGAAGACAATTCCAATAATAGGAAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000295900.10
ENST00000466529.1
ENST00000474112.5
ENST00000484332.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS CCA 90 bp GACCGGGTGCAGGGCTTCTTGGTGTCGAGATCAATAACCCCACAGTaGATGTCAGGATCAAACTCTCTTTCTGATAATCTCTTATTTAAA +
Preference number: 5 (lower is better)
Translates to: DRVQGFLVSRSITPQ*MSGSNSLSDNLLFK
Trigger: TTTAAATAAGAGATTATCAGAAAGAGAGTTTGATCCTGACATCCACTGTGGGGTTATTGATCTCGACACCAAGAAGCCCTGCACCCGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295900.10
ENST00000466529.1
ENST00000474112.5
ENST00000484332.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS CCA 90 bp TTTTTGTGCTCGGCTAATAACACATCAAATCGTTTTCTTCTACCCTaGACAGCCCTGCGCTGGGTTAAGGAATGTGTCTTGCATGTCAAA +
Preference number: 5 (lower is better)
Translates to: FLCSANNTSNRFLLP*TALRWVKECVLHVK
Trigger: TTTGACATGCAAGACACATTCCTTAACCCAGCGCAGGGCTGTCCAGGGTAGAAGAAAACGATTTGATGTGTTATTAGCCGAGCACAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000295900.10
ENST00000466529.1
ENST00000472569.1
ENST00000474112.5
ENST00000484332.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS CCA 90 bp ACTACTACTGGGCACAATCATTGCAAAGATTCACTTCTAGCCAACTaGCTAGAAGAGTTGCAGGCCTGGGTTTCTAACTTAGAGAAAAGG +
Preference number: 5 (lower is better)
Translates to: TTTGHNHCKDSLLAN*LEELQAWVSNLEKR
Trigger: CCTTTTCTCTAAGTTAGAAACCCAGGCCTGCAACTCTTCTAGCCAGTTGGCTAGAAGTGAATCTTTGCAATGATTGTGCCCAGTAGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643453.1
CDS-3UTR CAA 90 bp CATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACACATTCTTGCACTGCCTCCTTaGCTTTTGGACAGAGAAGGG +
Preference number: 5 (lower is better)
Translates to: HEAEYLFTNQPTNPTKHILALPP*LLDREG
Trigger: CCCTTCTCTGTCCAAAAGCAAAGGAGGCAGTGCAAG...AATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CAA 90 bp ACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACACAAACGGTTGCTTCCACTaGCACTGCCTCCTTTGCTTT +
Preference number: 5 (lower is better)
Translates to: TMKLNICLQTNQPTQPNTNGCFH*HCLLCF
Trigger: AAAGCAAAGGAGGCAGTGCAAGTGGAAGCAACCGTT...TGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CAA 90 bp AGGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCCTGATGGGGAACTCTACTTaGCTGAATGGGATGCATTGG +
Preference number: 5 (lower is better)
Translates to: RLGYFVMVSWANIYISFLMGNST*LNGMHW
Trigger: CCAATGCATCCCATTCAGCAAAGTAGAGTTCCCCAT...CAGGAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp CAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTGTTAAGGAATGTGTCTaGCATGTCAAAGACCGGGTG +
Preference number: 5 (lower is better)
Translates to: QTTLTLIKAIRWLNLIQCVKECV*HVKDRV
Trigger: CACCCGGTCTTTGACATGCAAGACACATTCCTTAAC...ACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp TTGGTAGCAAGCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGTTAAGGAATGTGTCTaGCATGTCAAAGACCGGGTG +
Preference number: 5 (lower is better)
Translates to: LVASSSDHFNTDKSNSVAVKECV*HVKDRV
Trigger: CACCCGGTCTTTGACATGCAAGACACATTCCTTAAC...AGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGCTTGCTACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp AGTGGCATGAAGGGGAGTGCATACAAAAACACACAATGCCAGAAGTGCTTGAAGTCCTTTTCCCTGGTTTaGTTTTTGTGCTCGGCTAAT +
Preference number: 5 (lower is better)
Translates to: SGMKGSAYKNTQCQKCLKSFSLV*FLCSAN
Trigger: ATTAGCCGAGCACAAAAACAAAACCAGGGAAAAGGA...CTTCAAGCACTTCTGGCATTGTGTGTTTTTGTATGCACTCCCCTTCATGCCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CAA 90 bp GGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCCTGGAACATATGTCGGCACAGAGTTaGTCCGGTGAGGAATACGTG +
Preference number: 5 (lower is better)
Translates to: GYFVMVSWANIYISFLEHMSAQS*SGEEYV
Trigger: CACGTATTCCTCACCGGACAAACTCTGTGCCGACAT...ATGTTCCAGGAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp AGACACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAAGGACACTTGTCTGGATaGCATACTGCACACAGGATC +
Preference number: 5 (lower is better)
Translates to: RHHEAEYLFTNQPTNPTKGHLSG*HTAHRI
Trigger: GATCCTGTGTGCAGTATGCAATCCAGACAAGTGTCC...TTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CAA 90 bp AATAAACATCTGAAGTGGCATGAAGGGGAGTGCATACAAAAACACACAATGCCAGGACACTTGTCTGGATaGCATACTGCACACAGGATC +
Preference number: 5 (lower is better)
Translates to: NKHLKWHEGECIQKHTMPGHLSG*HTAHRI
Trigger: GATCCTGTGTGCAGTATGCAATCCAGACAAGTGTCC...TGGCATTGTGTGTTTTTGTATGCACTCCCCTTCATGCCACTTCAGATGTTTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CAA 90 bp GACACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACTTACCAGAAGACTCCTaGGGCCTCAAAGATTTGCTG +
Preference number: 5 (lower is better)
Translates to: DTMKLNICLQTNQPTQPNLPEDS*GLKDLL
Trigger: CAGCAAATCTTTGAGGCCCAAGGAGTCTTCTGGTAA...GTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CAA 90 bp GTAGCAAGCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAATTACCAGAAGACTCCTaGGGCCTCAAAGATTTGCTG +
Preference number: 5 (lower is better)
Translates to: VASSSDHFNTDKSNSVAELPEDS*GLKDLL
Trigger: CAGCAAATCTTTGAGGCCCAAGGAGTCTTCTGGTAA...TTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGCTTGCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp CTATCCCTTGACATTTGTTCATGTTCTATACAGCAGCCAACACAAAGTCCAGCTTTACCAGAAGACTCCTaGGGCCTCAAAGATTTGCTG +
Preference number: 5 (lower is better)
Translates to: LSLDICSCSIQQPTQSPALPEDS*GLKDLL
Trigger: CAGCAAATCTTTGAGGCCCAAGGAGTCTTCTGGTAA...AGCTGGACTTTGTGTTGGCTGCTGTATAGAACATGAACAAATGTCAAGGGATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CAA 90 bp ACATTCTTTTGCCCAGCCAATCTACTTGAAGAGTGGCTCTGTGATATACTGCAAGGACGTTCACCGCATTaGCTTTATTCGTCACACAGT +
Preference number: 5 (lower is better)
Translates to: TFFCPANLLEEWLCDILQGRSPH*LYSSHS
Trigger: ACTGTGTGACGAATAAAGCAAATGCGGTGAACGTCC...TTGCAGTATATCACAGAGCCACTCTTCAAGTAGATTGGCTGGGCAAAAGAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp ACAAAAACAAAAACTTCTCACAGATTGGTAGCAAGCAGTTCAGACCACTTTAACTTGCTGCTGCTGTTGTaGATGCTGCTCGAGCTGGGT +
Preference number: 5 (lower is better)
Translates to: TKTKTSHRLVASSSDHFNLLLLL*MLLELG
Trigger: ACCCAGCTCGAGCAGCATCAACAACAGCAGCAGCAA...GTTAAAGTGGTCTGAACTGCTTGCTACCAATCTGTGAGAAGTTTTTGTTTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp TTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAAAAGATGCACTTTGGCAACCTTaGTGGGTTTGCTGCTGCTGT +
Preference number: 5 (lower is better)
Translates to: FTNQPTNPTKHISELTKDALWQP*WVCCCC
Trigger: ACAGCAGCAGCAAACCCACAAAGGTTGCCAAAGTGC...ATCTTTTGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CAA 90 bp AAAAGGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCTTCACGGCTGGCACTTaGGCAACCTTTGTGGGTTTG +
Preference number: 5 (lower is better)
Translates to: KRLGYFVMVSWANIYISFFTAGT*ATFVGL
Trigger: CAAACCCACAAAGGTTGCCAAAGTGCCAGCCGTGAA...GAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp GACACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACTGTTTCATGTGGACATaGTTCACGGCTGGCACTTTG +
Preference number: 5 (lower is better)
Translates to: DTMKLNICLQTNQPTQPNCFMWT*FTAGTL
Trigger: CAAAGTGCCAGCCGTGAACAATGTCCACATGAAACA...GTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CAA 90 bp GCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCTGTTTCATGTGGACATaGTTCACGGCTGGCACTTTG +
Preference number: 5 (lower is better)
Translates to: AVQTTLTLIKAIRWLNLICFMWT*FTAGTL
Trigger: CAAAGTGCCAGCCGTGAACAATGTCCACATGAAACA...GATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp TCAGCGCCTTGGAAATTTTACCCTGTGTTCGGCAACTTCGTGTGTTCTTCTAAGAAAACTTCTCACAGATaGGTAGCAAGCAGTTCAGAC +
Preference number: 5 (lower is better)
Translates to: SAPWKFYPVFGNFVCSSKKTSHR*VASSSD
Trigger: GTCTGAACTGCTTGCTACCAATCTGTGAGAAGTTTT...CTTAGAAGAACACACGAAGTTGCCGAACACAGGGTAAAATTTCCAAGGCGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CAA 90 bp AACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTCCTTTATGAGTGCCCAGCCAATCTACTaGAAGAGTGGCTCTGTGATA +
Preference number: 5 (lower is better)
Translates to: NTDKSNSVAELDPVSFMSAQPIY*KSGSVI
Trigger: TATCACAGAGCCACTCTTCAAGTAGATTGGCTGGGC...ACTCATAAAGGACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp GTAGCAAGCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAATCTACCCATACCCCATaGCACTTGTCACCAAGGAAT +
Preference number: 5 (lower is better)
Translates to: VASSSDHFNTDKSNSVAESTHTP*HLSPRN
Trigger: ATTCCTTGGTGACAAGTGCAATGGGGTATGGGTAGA...TTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGCTTGCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CAA 90 bp GCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCTCTACCCATACCCCATaGCACTTGTCACCAAGGAAT +
Preference number: 5 (lower is better)
Translates to: AVQTTLTLIKAIRWLNLISTHTP*HLSPRN
Trigger: ATTCCTTGGTGACAAGTGCAATGGGGTATGGGTAGA...GATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CAA 90 bp AGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCACTTGCTACTGCAGGCTaGCATCATGATTTGGGTCTG +
Preference number: 5 (lower is better)
Translates to: SSDHFNTDKSNSVAELDPLATAG*HHDLGL
Trigger: CAGACCCAAATCATGATGCAAGCCTGCAGTAGCAAG...TGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484332.1
CDS TCA 90 bp CTCTCTTCTCTGGCACCTTTTCTTTGGAGGGTAGGCCAAAAATCCTaGTCAATTTACCAATGGATCTTCATCTGCTGCAATTGTGAAAGC +
Preference number: 5 (lower is better)
Translates to: LSSLAPFLWRVGQKS*SIYQWIFICCNCES
Trigger: GCTTTCACAATTGCAGCAGATGAAGATCCATTGGTAAATTGATCAGGATTTTTGGCCTACCCTCCAAAGAAAAGGTGCCAGAGAAGAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643464.1
CDS GCA 90 bp CTCTCTCCTTTGCATGTGAGCAGTTATCACAATGGTTATTCATCTTaGAAATTAATTCCTTCACACCAAGCACCCATCACGATCACCGAC +
Preference number: 5 (lower is better)
Translates to: LSPLHVSSYHNGYSS*KLIPSHQAPITITD
Trigger: GTCGGTGATCGTGATGGGTGCTTGGTGTGAAGGAATTAATTTGCAAGATGAATAACCATTGTGATAACTGCTCACATGCAAAGGAGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646942.1
CDS CCA 90 bp TGCAAAGATTCACTTCTAGCCAACTGGCTAGAAGAGTTGCAGGCCTaGGTTTCTAACTTAGAGAAAAGGCTCTTATGTTTGCCTTTTGGT +
Preference number: 5 (lower is better)
Translates to: CKDSLLANWLEELQA*VSNLEKRLLCLPFG
Trigger: ACCAAAAGGCAAACATAAGAGCCTTTTCTCTAAGTTAGAAACCCAGGCCTGCAACTCTTCTAGCCAGTTGGCTAGAAGTGAATCTTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643453.1
CDS-3UTR CAA 90 bp AGACACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAATTCCGCTCCTTTTCTTaGGAGGGTAGGCCAAAAATC +
Preference number: 5 (lower is better)
Translates to: RHHEAEYLFTNQPTNPTKFRSFS*EGRPKI
Trigger: GATTTTTGGCCTACCCTCCAAAGAAAAGGAGCGGAA...TTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGTGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CAA 90 bp CATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCGGCAGGTTTCTACCCTTTTTTTCCCAAACTCCTaGAAACTTTCGTCCAATTCT +
Preference number: 5 (lower is better)
Translates to: HSFREILVKTTARQVSTLFFPNS*KLSSNS
Trigger: AGAATTGGACGAAAGTTTCAAGGAGTTTGGGAAAAA...AAGGGTAGAAACCTGCCGGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATG
43% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp GTAGCAAGCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAAGACAGAAACCAAATATaGGCATGTCTTCCCGACAGA +
Preference number: 5 (lower is better)
Translates to: VASSSDHFNTDKSNSVAEDRNQI*ACLPDR
Trigger: TCTGTCGGGAAGACATGCCAATATTTGGTTTCTGTC...TTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGCTTGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp AAAAGGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCAACGGTTGCTTCCACTaGCACTGCCTCCTTTGCTTT +
Preference number: 5 (lower is better)
Translates to: KRLGYFVMVSWANIYISFNGCFH*HCLLCF
Trigger: AAAGCAAAGGAGGCAGTGCAAGTGGAAGCAACCGTT...GAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp ACAAAAACTTCTCACAGATTGGTAGCAAGCAGTTCAGACCACTTTAACACTGATAACGGTTGCTTCCACTaGCACTGCCTCCTTTGCTTT +
Preference number: 5 (lower is better)
Translates to: TKTSHRLVASSSDHFNTDNGCFH*HCLLCF
Trigger: AAAGCAAAGGAGGCAGTGCAAGTGGAAGCAACCGTT...ATCAGTGTTAAAGTGGTCTGAACTGCTTGCTACCAATCTGTGAGAAGTTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp CTCCAAAATGATTTATACTTGCTGTCTGGGCATCAAAAATTTCAAACCAGTTTGCCACTGGAAGAACGGTaGCTTCCACTTGCACTGCCT +
Preference number: 5 (lower is better)
Translates to: LQNDLYLLSGHQKFQTSLPLEER*LPLALP
Trigger: AGGCAGTGCAAGTGGAAGCAACCGTTCTTCCAGTGG...CAAACTGGTTTGAAATTTTTGATGCCCAGACAGCAAGTATAAATCATTTTGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp AGGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCCTGGGTGATTTCAACAACTaGGAACTTGATGAGGATGCG +
Preference number: 5 (lower is better)
Translates to: RLGYFVMVSWANIYISFLGDFNN*ELDEDA
Trigger: CGCATCCTCATCAAGTTCCAAGTTGTTGAAATCACC...CAGGAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp CTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAAAAATGGGGAACTCTACTTaGCTGAATGGGATGCATTGG +
Preference number: 5 (lower is better)
Translates to: LFTNQPTNPTKHISELTKMGNST*LNGMHW
Trigger: CCAATGCATCCCATTCAGCAAAGTAGAGTTCCCCAT...TTTTGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CAA 90 bp ACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTCCTTTATGAGTACTGTTAAGGAATGTGTCTaGCATGTCAAAGACCGGGTG +
Preference number: 5 (lower is better)
Translates to: TDKSNSVAELDPVSFMSTVKECV*HVKDRV
Trigger: CACCCGGTCTTTGACATGCAAGACACATTCCTTAAC...AGTACTCATAAAGGACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp CTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAAAAGTTAAGGAATGTGTCTaGCATGTCAAAGACCGGGTG +
Preference number: 5 (lower is better)
Translates to: LFTNQPTNPTKHISELTKVKECV*HVKDRV
Trigger: CACCCGGTCTTTGACATGCAAGACACATTCCTTAAC...TTTTGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CAA 90 bp ACTTGTTATTGTGGATCCTATTCACATCTTTCGGAACAACATGATCGATCTGTATCAACAGACTCTTCTTaGTCATCGCCTTCGCCCTCC +
Preference number: 5 (lower is better)
Translates to: TCYCGSYSHLSEQHDRSVSTDSS*SSPSPS
Trigger: GGAGGGCGAAGGCGATGACAAAGAAGAGTCTGTTGA...TACAGATCGATCATGTTGTTCCGAAAGATGTGAATAGGATCCACAATAACAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CAA 90 bp AGGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCCTGACTGCTACTGGCATTTaGACAGTTAGTGCTGTTACC +
Preference number: 5 (lower is better)
Translates to: RLGYFVMVSWANIYISFLTATGI*TVSAVT
Trigger: GGTAACAGCACTAACTGTCAAAATGCCAGTAGCAGT...CAGGAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp GTAGCAAGCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAAACTGCTACTGGCATTTaGACAGTTAGTGCTGTTACC +
Preference number: 5 (lower is better)
Translates to: VASSSDHFNTDKSNSVAETATGI*TVSAVT
Trigger: GGTAACAGCACTAACTGTCAAAATGCCAGTAGCAGT...TTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGCTTGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp ACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACACAGGACGTTCACCGCATTaGCTTTATTCGTCACACAGT +
Preference number: 5 (lower is better)
Translates to: TMKLNICLQTNQPTQPNTGRSPH*LYSSHS
Trigger: ACTGTGTGACGAATAAAGCAAATGCGGTGAACGTCC...TGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CAA 90 bp TTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAAAAGATATCACACTCATCCTCTaGATGGATTCAGCAGGGCTC +
Preference number: 5 (lower is better)
Translates to: FTNQPTNPTKHISELTKDITLIL*MDSAGL
Trigger: GAGCCCTGCTGAATCCATCAAGAGGATGAGTGTGAT...ATCTTTTGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CAA 90 bp ACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTCCTTTATGAGTACTTGTTTCATGTGGACATaGTTCACGGCTGGCACTTTG +
Preference number: 5 (lower is better)
Translates to: TDKSNSVAELDPVSFMSTCFMWT*FTAGTL
Trigger: CAAAGTGCCAGCCGTGAACAATGTCCACATGAAACA...AGTACTCATAAAGGACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp ACGATCAGCGCCTTGGAAATTTTACCCTGTGTTCGGCAACTTCGTGTGTTCTTCTTCATTCCTGGAACATaGCTATCAAAATCTAAAGCC +
Preference number: 5 (lower is better)
Translates to: TISALEILPCVRQLRVFFFIPGT*LSKSKA
Trigger: GGCTTTAGATTTTGATAGCAATGTTCCAGGAATGAA...GAAGAACACACGAAGTTGCCGAACACAGGGTAAAATTTCCAAGGCGCTGATCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CAA 90 bp TGTTTGTGGCAGACAGAATCCAAAATGGCTAATTTCCTAATCCCGATGCTCTGTCATACCCCATTGCACTaGTCACCAAGGAATCAACTA +
Preference number: 5 (lower is better)
Translates to: CLWQTESKMANFLIPMLCHTPLH*SPRNQL
Trigger: TAGTTGATTCCTTGGTGACAAGTGCAATGGGGTATG...ACAGAGCATCGGGATTAGGAAATTAGCCATTTTGGATTCTGTCTGCCACAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CAA 90 bp ACATTCTTTTGCCCAGCCAATCTACTTGAAGAGTGGCTCTGTGATATACTGCAACATACCCCATTGCACTaGTCACCAAGGAATCAACTA +
Preference number: 5 (lower is better)
Translates to: TFFCPANLLEEWLCDILQHTPLH*SPRNQL
Trigger: TAGTTGATTCCTTGGTGACAAGTGCAATGGGGTATG...TTGCAGTATATCACAGAGCCACTCTTCAAGTAGATTGGCTGGGCAAAAGAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CAA 90 bp GGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCCTGGTCTAGAACTATTGGCTaGGCAGTGAACCACTTCAAA +
Preference number: 5 (lower is better)
Translates to: GWAILSWCLGLTSIFHSWSRTIG*AVNHFK
Trigger: TTTGAAGTGGTTCACTGCCAAGCCAATAGTTCTAGA...CCAGGAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CAA 90 bp ACATTCTTTTGCCCAGCCAATCTACTTGAAGAGTGGCTCTGTGATATACTGCAAGACACATCGTGTAAGTaGCTGGCTGACAAAAAGATC +
Preference number: 5 (lower is better)
Translates to: TFFCPANLLEEWLCDILQDTSCK*LADKKI
Trigger: GATCTTTTTGTCAGCCAGCAACTTACACGATGTGTC...TTGCAGTATATCACAGAGCCACTCTTCAAGTAGATTGGCTGGGCAAAAGAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CAA 90 bp AGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCATTTGGTTGTGCTTCATaGCACACTTGCTACTGCAGG +
Preference number: 5 (lower is better)
Translates to: SSDHFNTDKSNSVAELDPFGCAS*HTCYCR
Trigger: CCTGCAGTAGCAAGTGTGCAATGAAGCACAACCAAA...TGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484332.1
CDS-3UTR CAA 90 bp GTACTCACTGCTAGAGACATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCTTCCATTCACAGAATTaGGTTGTGCTTCATTGCACA +
Preference number: 5 (lower is better)
Translates to: VLTARDIASGKSSLKQQPFHSQN*VVLHCT
Trigger: TGTGCAATGAAGCACAACCAAATTCTGTGAATGGAA...GGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATGTCTCTAGCAGTGAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484332.1
CDS TCA 90 bp GACATTCTTTCCGCTCCTTTTCTTTGGAGGGTAGGCCAAAAATCCTaGTCAATTTACCAATGGATCTTCATCTGCTGCAATTGTGAAAGC +
Preference number: 5 (lower is better)
Translates to: DILSAPFLWRVGQKS*SIYQWIFICCNCES
Trigger: GCTTTCACAATTGCAGCAGATGAAGATCCATTGGTAAATTGATCAGGATTTTTGGCCTACCCTCCAAAGAAAAGGAGCGGAAAGAATGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000474513.6
ENST00000674280.1
CDS TCA 90 bp ACCTCAGTTAGCTCCTCTTTTCTTTGGAGGGTAGGCCAAAAATCCTaGTCAATTTACCAATGGATCTTCATCTGCTGCAATTGTGAAAGC +
Preference number: 5 (lower is better)
Translates to: TSVSSSFLWRVGQKS*SIYQWIFICCNCES
Trigger: GCTTTCACAATTGCAGCAGATGAAGATCCATTGGTAAATTGATCAGGATTTTTGGCCTACCCTCCAAAGAAAAGAGGAGCTAACTGAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000647117.1
ENST00000674254.1
CDS TCA 90 bp GTCATTTGCAGCAACATAGATGAACCTGGAGGATATTATGTTAAGTaGAATCAGCCAGGCCCAGAAAGACAAACAGCACACAATCTCACT +
Preference number: 5 (lower is better)
Translates to: VICSNIDEPGGYYVK*NQPGPERQTAHNLT
Trigger: AGTGAGATTGTGTGCTGTTTGTCTTTCTGGGCCTGGCTGATTTCACTTAACATAATATCCTCCAGGTTCATCTATGTTGCTGCAAATGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643464.1
CDS TCA 90 bp AAAATCCTGATCAATTTACCAATGGATCTTCATCTGCTGCAATTGTaGAAGCTCGTTCGTCTTAATTCTGTTCAGATCTGGCGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: KILINLPMDLHLLQL*KLVRLNSVQIWRLA
Trigger: AGCCAGCCGCCAGATCTGAACAGAATTAAGACGAACGAGCTTTCACAATTGCAGCAGATGAAGATCCATTGGTAAATTGATCAGGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674280.1
CDS-3UTR CAA 90 bp GTACTCACTGCTAGAGACATAGCTTCAGGGAAATCCTCGTTAAAACAACAGCCCAGAAAGCTATCGAAGTaGAATCAAAGTGACTTTTGG +
Preference number: 5 (lower is better)
Translates to: VLTARDIASGKSSLKQQPRKLSK*NQSDFW
Trigger: CCAAAAGTCACTTTGATTCAACTTCGATAGCTTTCT...GGGCTGTTGTTTTAACGAGGATTTCCCTGAAGCTATGTCTCTAGCAGTGAGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295900.10
CDS-3UTR CAA 90 bp TATCTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAGACAGAAACCAAATATaGGCATGTCTTCCCGACAGA +
Preference number: 5 (lower is better)
Translates to: YLFTNQPTNPTKHISELTDRNQI*ACLPDR
Trigger: TCTGTCGGGAAGACATGCCAATATTTGGTTTCTGTC...TGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CAA 90 bp CTCCAAAATGATTTATACTTGCTGTCTGGGCATCAAAAATTTCAAACCAGTTTGCTTGCACTGCCTCCTTaGCTTTTGGACAGAGAAGGG +
Preference number: 5 (lower is better)
Translates to: LQNDLYLLSGHQKFQTSLLALPP*LLDREG
Trigger: CCCTTCTCTGTCCAAAAGCAAAGGAGGCAGTGCAAG...CAAACTGGTTTGAAATTTTTGATGCCCAGACAGCAAGTATAAATCATTTTGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp AGACACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAAGGTGATTTCAACAACTaGGAACTTGATGAGGATGCG +
Preference number: 5 (lower is better)
Translates to: RHHEAEYLFTNQPTNPTKGDFNN*ELDEDA
Trigger: CGCATCCTCATCAAGTTCCAAGTTGTTGAAATCACC...TTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CAA 90 bp CCAAAACATTCTTTTGCCCAGCCAATCTACTTGAAGAGTGGCTCTGTGATATACAGCTGCAGTTTCTCTTaGGGTGATTTCAACAACTTG +
Preference number: 5 (lower is better)
Translates to: PKHSFAQPIYLKSGSVIYSCSFS*GDFNNL
Trigger: CAAGTTGTTGAAATCACCCAAAGAGAAACTGCAGCT...GTATATCACAGAGCCACTCTTCAAGTAGATTGGCTGGGCAAAAGAATGTTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp TCAAAAGGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATATGGGGAACTCTACTTaGCTGAATGGGATGCATTGG +
Preference number: 5 (lower is better)
Translates to: SKGWAILSWCLGLTSIFHMGNST*LNGMHW
Trigger: CCAATGCATCCCATTCAGCAAAGTAGAGTTCCCCAT...ATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCTTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp CTATCCCTTGACATTTGTTCATGTTCTATACAGCAGCCAACACAAAGTCCAGCTTCCCTGGTTTTGTTTTaGTGCTCGGCTAATAACACA +
Preference number: 5 (lower is better)
Translates to: LSLDICSCSIQQPTQSPASLVLF*CSANNT
Trigger: TGTGTTATTAGCCGAGCACAAAAACAAAACCAGGGA...AGCTGGACTTTGTGTTGGCTGCTGTATAGAACATGAACAAATGTCAAGGGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CAA 90 bp GACACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAACTCCTTTTCCCTGGTTTaGTTTTTGTGCTCGGCTAAT +
Preference number: 5 (lower is better)
Translates to: DTMKLNICLQTNQPTQPNSFSLV*FLCSAN
Trigger: ATTAGCCGAGCACAAAAACAAAACCAGGGAAAAGGA...GTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CAA 90 bp ACATTCTTTTGCCCAGCCAATCTACTTGAAGAGTGGCTCTGTGATATACTGCAATCCTTTTCCCTGGTTTaGTTTTTGTGCTCGGCTAAT +
Preference number: 5 (lower is better)
Translates to: TFFCPANLLEEWLCDILQSFSLV*FLCSAN
Trigger: ATTAGCCGAGCACAAAAACAAAACCAGGGAAAAGGA...TTGCAGTATATCACAGAGCCACTCTTCAAGTAGATTGGCTGGGCAAAAGAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp ACAAAAACAAAAACTTCTCACAGATTGGTAGCAAGCAGTTCAGACCACTTTAACGGACACTTGTCTGGATaGCATACTGCACACAGGATC +
Preference number: 5 (lower is better)
Translates to: TKTKTSHRLVASSSDHFNGHLSG*HTAHRI
Trigger: GATCCTGTGTGCAGTATGCAATCCAGACAAGTGTCC...GTTAAAGTGGTCTGAACTGCTTGCTACCAATCTGTGAGAAGTTTTTGTTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp TATCTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAACTGCTACTGGCATTTaGACAGTTAGTGCTGTTACC +
Preference number: 5 (lower is better)
Translates to: YLFTNQPTNPTKHISELTTATGI*TVSAVT
Trigger: GGTAACAGCACTAACTGTCAAAATGCCAGTAGCAGT...TGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CAA 90 bp TCAAAAGGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATGGACGTTCACCGCATTaGCTTTATTCGTCACACAGT +
Preference number: 5 (lower is better)
Translates to: SKGWAILSWCLGLTSIFHGRSPH*LYSSHS
Trigger: ACTGTGTGACGAATAAAGCAAATGCGGTGAACGTCC...ATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCTTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp GCCTCCAAAATGATTTATACTTGCTGTCTGGGCATCAAAAATTTCAAACCAGTTATCACACTCATCCTCTaGATGGATTCAGCAGGGCTC +
Preference number: 5 (lower is better)
Translates to: ASKMIYTCCLGIKNFKPVITLIL*MDSAGL
Trigger: GAGCCCTGCTGAATCCATCAAGAGGATGAGTGTGAT...AACTGGTTTGAAATTTTTGATGCCCAGACAGCAAGTATAAATCATTTTGGAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp ACAAAAACAAAAACTTCTCACAGATTGGTAGCAAGCAGTTCAGACCACTTTAACATCACACTCATCCTCTaGATGGATTCAGCAGGGCTC +
Preference number: 5 (lower is better)
Translates to: TKTKTSHRLVASSSDHFNITLIL*MDSAGL
Trigger: GAGCCCTGCTGAATCCATCAAGAGGATGAGTGTGAT...GTTAAAGTGGTCTGAACTGCTTGCTACCAATCTGTGAGAAGTTTTTGTTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp CTCCAAAATGATTTATACTTGCTGTCTGGGCATCAAAAATTTCAAACCAGTTTGGCACTTTGGCAACCTTaGTGGGTTTGCTGCTGCTGT +
Preference number: 5 (lower is better)
Translates to: LQNDLYLLSGHQKFQTSLALWQP*WVCCCC
Trigger: ACAGCAGCAGCAAACCCACAAAGGTTGCCAAAGTGC...CAAACTGGTTTGAAATTTTTGATGCCCAGACAGCAAGTATAAATCATTTTGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp AAAAGGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCTGTTTCATGTGGACATaGTTCACGGCTGGCACTTTG +
Preference number: 5 (lower is better)
Translates to: KRLGYFVMVSWANIYISFCFMWT*FTAGTL
Trigger: CAAAGTGCCAGCCGTGAACAATGTCCACATGAAACA...GAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp CAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTAAAACTTCTCACAGATaGGTAGCAAGCAGTTCAGAC +
Preference number: 5 (lower is better)
Translates to: QTTLTLIKAIRWLNLIQCKTSHR*VASSSD
Trigger: GTCTGAACTGCTTGCTACCAATCTGTGAGAAGTTTT...ACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp CCAAAACATTCTTTTGCCCAGCCAATCTACTTGAAGAGTGGCTCTGTGATATACCAATGCCAGAAGTGCTaGAAGCAGAAATCTACACTT +
Preference number: 5 (lower is better)
Translates to: PKHSFAQPIYLKSGSVIYQCQKC*KQKSTL
Trigger: AAGTGTAGATTTCTGCTTCAAGCACTTCTGGCATTG...GTATATCACAGAGCCACTCTTCAAGTAGATTGGCTGGGCAAAAGAATGTTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CAA 90 bp AGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGACACATCGTGTAAGTaGCTGGCTGACAAAAAGATC +
Preference number: 5 (lower is better)
Translates to: SSDHFNTDKSNSVAELDPDTSCK*LADKKI
Trigger: GATCTTTTTGTCAGCCAGCAACTTACACGATGTGTC...TGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CAA 90 bp ACAAAAACAAAAACTTCTCACAGATTGGTAGCAAGCAGTTCAGACCACTTTAACCTTTGGAGAGGCGTCTaGCTACCTTCCATTCACAGA +
Preference number: 5 (lower is better)
Translates to: TKTKTSHRLVASSSDHFNLWRGV*LPSIHR
Trigger: TCTGTGAATGGAAGGTAGCAAGACGCCTCTCCAAAG...GTTAAAGTGGTCTGAACTGCTTGCTACCAATCTGTGAGAAGTTTTTGTTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000484332.1
CDS TCA 90 bp AAAATCCTGATCAATTTACCAATGGATCTTCATCTGCTGCAATTGTaGAAGCTCGTTCGTCTTAATTCTGTTCAGATCTGTATCCCCGGC +
Preference number: 5 (lower is better)
Translates to: KILINLPMDLHLLQL*KLVRLNSVQICIPG
Trigger: GCCGGGGATACAGATCTGAACAGAATTAAGACGAACGAGCTTTCACAATTGCAGCAGATGAAGATCCATTGGTAAATTGATCAGGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474513.6
CDS GCA 90 bp CCCACCAACTCCAAATATGCTCCATGTTTGGGCTTATGTAACATTTaGTACTACTGTAAAAAGCACTTGAATTACAAAGGTCCTGGCAGA +
Preference number: 5 (lower is better)
Translates to: PTNSKYAPCLGLCNI*YYCKKHLNYKGPGR
Trigger: TCTGCCAGGACCTTTGTAATTCAAGTGCTTTTTACAGTAGTAGCAAATGTTACATAAGCCCAAACATGGAGCATATTTGGAGTTGGTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484332.1
CDS-3UTR CAA 90 bp TATCTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAAGCTGCAGTTTCTCTTaGGGTGATTTCAACAACTTG +
Preference number: 5 (lower is better)
Translates to: YLFTNQPTNPTKHISELTSCSFS*GDFNNL
Trigger: CAAGTTGTTGAAATCACCCAAAGAGAAACTGCAGCT...TGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CAA 90 bp AGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCATCCCTGGTTTTGTTTTaGTGCTCGGCTAATAACACA +
Preference number: 5 (lower is better)
Translates to: SSDHFNTDKSNSVAELDPSLVLF*CSANNT
Trigger: TGTGTTATTAGCCGAGCACAAAAACAAAACCAGGGA...TGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp GGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCCTGGAACATACTGCTACTGGCATTTaGACAGTTAGTGCTGTTACC +
Preference number: 5 (lower is better)
Translates to: GYFVMVSWANIYISFLEHTATGI*TVSAVT
Trigger: GGTAACAGCACTAACTGTCAAAATGCCAGTAGCAGT...ATGTTCCAGGAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp ACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCAGTGTCCTTTATGAGTACTAAAACTTCTCACAGATaGGTAGCAAGCAGTTCAGAC +
Preference number: 5 (lower is better)
Translates to: TDKSNSVAELDPVSFMSTKTSHR*VASSSD
Trigger: GTCTGAACTGCTTGCTACCAATCTGTGAGAAGTTTT...AGTACTCATAAAGGACACTGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp GCCTCCAAAATGATTTATACTTGCTGTCTGGGCATCAAAAATTTCAAACCAGTTAAAGGCTGGGCTATTTaGTCATGGTGTCTTGGGCTA +
Preference number: 5 (lower is better)
Translates to: ASKMIYTCCLGIKNFKPVKGWAI*SWCLGL
Trigger: TAGCCCAAGACACCATGACAAAATAGCCCAGCCTTT...AACTGGTTTGAAATTTTTGATGCCCAGACAGCAAGTATAAATCATTTTGGAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp ACATTCTTTTGCCCAGCCAATCTACTTGAAGAGTGGCTCTGTGATATACTGCAACTACCTGTTGTTGACTaGAAATTCCCTGAAACTGAA +
Preference number: 5 (lower is better)
Translates to: TFFCPANLLEEWLCDILQLPVVD*KFPETE
Trigger: TTCAGTTTCAGGGAATTTCAAGTCAACAACAGGTAG...TTGCAGTATATCACAGAGCCACTCTTCAAGTAGATTGGCTGGGCAAAAGAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CAA 90 bp CTGTTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAAAAAGATGCCAATATAATTaGCAGTGTGCTCCAAACAAC +
Preference number: 5 (lower is better)
Translates to: LFTNQPTNPTKHISELTKRCQYN*QCAPNN
Trigger: GTTGTTTGGAGCACACTGCAAATTATATTGGCATCT...TTTTGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CAA 90 bp TTTACAAACCAACCAACCAACCCAACCAAACACATTTCTGAGCTGACAAAAGATTCCCTGGTTTTGTTTTaGTGCTCGGCTAATAACACA +
Preference number: 5 (lower is better)
Translates to: FTNQPTNPTKHISELTKDSLVLF*CSANNT
Trigger: TGTGTTATTAGCCGAGCACAAAAACAAAACCAGGGA...ATCTTTTGTCAGCTCAGAAATGTGTTTGGTTGGGTTGGTTGGTTGGTTTGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CAA 90 bp AAAAGGCTGGGCTATTTTGTCATGGTGTCTTGGGCTAACATCTATATTTCATTCTCCCTGGTTTTGTTTTaGTGCTCGGCTAATAACACA +
Preference number: 5 (lower is better)
Translates to: KRLGYFVMVSWANIYISFSLVLF*CSANNT
Trigger: TGTGTTATTAGCCGAGCACAAAAACAAAACCAGGGA...GAATGAAATATAGATGTTAGCCCAAGACACCATGACAAAATAGCCCAGCCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp ACAAAAACTTCTCACAGATTGGTAGCAAGCAGTTCAGACCACTTTAACACTGATTCCTTTTCCCTGGTTTaGTTTTTGTGCTCGGCTAAT +
Preference number: 5 (lower is better)
Translates to: TKTSHRLVASSSDHFNTDSFSLV*FLCSAN
Trigger: ATTAGCCGAGCACAAAAACAAAACCAGGGAAAAGGA...ATCAGTGTTAAAGTGGTCTGAACTGCTTGCTACCAATCTGTGAGAAGTTTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp ACATTCTTTTGCCCAGCCAATCTACTTGAAGAGTGGCTCTGTGATATACTGCAATTCATTCCTGGAACATaGCTATCAAAATCTAAAGCC +
Preference number: 5 (lower is better)
Translates to: TFFCPANLLEEWLCDILQFIPGT*LSKSKA
Trigger: GGCTTTAGATTTTGATAGCAATGTTCCAGGAATGAA...TTGCAGTATATCACAGAGCCACTCTTCAAGTAGATTGGCTGGGCAAAAGAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp CTCCAAAATGATTTATACTTGCTGTCTGGGCATCAAAAATTTCAAACCAGTTTGAAAGGCTGGGCTATTTaGTCATGGTGTCTTGGGCTA +
Preference number: 5 (lower is better)
Translates to: LQNDLYLLSGHQKFQTSLKGWAI*SWCLGL
Trigger: TAGCCCAAGACACCATGACAAAATAGCCCAGCCTTT...CAAACTGGTTTGAAATTTTTGATGCCCAGACAGCAAGTATAAATCATTTTGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp CTATCCCTTGACATTTGTTCATGTTCTATACAGCAGCCAACACAAAGTCCAGCTAATGTAGAGAGTGCCTaGGAAACATTTAAGTGTATC +
Preference number: 5 (lower is better)
Translates to: LSLDICSCSIQQPTQSPANVESA*ETFKCI
Trigger: GATACACTTAAATGTTTCCAAGGCACTCTCTACATT...AGCTGGACTTTGTGTTGGCTGCTGTATAGAACATGAACAAATGTCAAGGGATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CAA 90 bp ACATTCTTTTGCCCAGCCAATCTACTTGAAGAGTGGCTCTGTGATATACTGCAAAACCATCAAGTCCTCTaGGCTCTGAAAATAAATTCT +
Preference number: 5 (lower is better)
Translates to: TFFCPANLLEEWLCDILQNHQVL*ALKINS
Trigger: AGAATTTATTTTCAGAGCCAAGAGGACTTGATGGTT...TTGCAGTATATCACAGAGCCACTCTTCAAGTAGATTGGCTGGGCAAAAGAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CAA 90 bp GCAGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCCAGCTGAGATGCTCTaGATTATGTGTACAAATTAT +
Preference number: 5 (lower is better)
Translates to: AVQTTLTLIKAIRWLNLIPAEML*IMCTNY
Trigger: ATAATTTGTACACATAATCAAGAGCATCTCAGCTGG...GATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CAA 90 bp AGTTCAGACCACTTTAACACTGATAAAAGCAATTCGGTGGCTGAACTTGATCCATACTGTAAAAAGCACTaGAATTACAAAGGTCCTGGC +
Preference number: 5 (lower is better)
Translates to: SSDHFNTDKSNSVAELDPYCKKH*NYKGPG
Trigger: GCCAGGACCTTTGTAATTCAAGTGCTTTTTACAGTA...TGGATCAAGTTCAGCCACCGAATTGCTTTTATCAGTGTTAAAGTGGTCTGAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484332.1
CDS TCA 90 bp AAAATCCTGATCAATTTACCAATGGATCTTCATCTGCTGCAATTGTaGAAGCTCGTTCGTCTTAATTCTGTTCAGATCCCATCACGATCA +
Preference number: 5 (lower is better)
Translates to: KILINLPMDLHLLQL*KLVRLNSVQIPSRS
Trigger: TGATCGTGATGGGATCTGAACAGAATTAAGACGAACGAGCTTTCACAATTGCAGCAGATGAAGATCCATTGGTAAATTGATCAGGATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674254.1
CDS-3UTR CAA 90 bp AGACACCATGAAGCTGAATATCTGTTTACAAACCAACCAACCAACCCAACCAAATTTTTCCCAAACTCCTaGAAACTTTCGTCCAATTCT +
Preference number: 5 (lower is better)
Translates to: RHHEAEYLFTNQPTNPTKFFPNS*KLSSNS
Trigger: AGAATTGGACGAAAGTTTCAAGGAGTTTGGGAAAAA...TTTGGTTGGGTTGGTTGGTTGGTTTGTAAACAGATATTCAGCTTCATGGTGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS-3UTR CAA 90 bp ACAAAAACAAAAACTTCTCACAGATTGGTAGCAAGCAGTTCAGACCACTTTAACAGCTGCAGTTTCTCTTaGGGTGATTTCAACAACTTG +
Preference number: 5 (lower is better)
Translates to: TKTKTSHRLVASSSDHFNSCSFS*GDFNNL
Trigger: CAAGTTGTTGAAATCACCCAAAGAGAAACTGCAGCT...GTTAAAGTGGTCTGAACTGCTTGCTACCAATCTGTGAGAAGTTTTTGTTTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS-3UTR CAA 90 bp ACAAAAACTTCTCACAGATTGGTAGCAAGCAGTTCAGACCACTTTAACACTGATAACCATCAAGTCCTCTaGGCTCTGAAAATAAATTCT +
Preference number: 5 (lower is better)
Translates to: TKTSHRLVASSSDHFNTDNHQVL*ALKINS
Trigger: AGAATTTATTTTCAGAGCCAAGAGGACTTGATGGTT...ATCAGTGTTAAAGTGGTCTGAACTGCTTGCTACCAATCTGTGAGAAGTTTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295900.10
ENST00000674280.1
CDS-3UTR CAA 90 bp ACAAAAACTTCTCACAGATTGGTAGCAAGCAGTTCAGACCACTTTAACACTGATAAATATGCTCCATGTTaGGGCTTATGTAACATTTGC +
Preference number: 5 (lower is better)
Translates to: TKTSHRLVASSSDHFNTDKYAPC*GLCNIC
Trigger: GCAAATGTTACATAAGCCCAAACATGGAGCATATTT...ATCAGTGTTAAAGTGGTCTGAACTGCTTGCTACCAATCTGTGAGAAGTTTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484332.1
CDS TCA 90 bp AAAATCCTGATCAATTTACCAATGGATCTTCATCTGCTGCAATTGTaGAAGCTCGTTCGTCTTAATTCTGTTCAGATCTGGGTTCAAAAT +
Preference number: 5 (lower is better)
Translates to: KILINLPMDLHLLQL*KLVRLNSVQIWVQN
Trigger: ATTTTGAACCCAGATCTGAACAGAATTAAGACGAACGAGCTTTCACAATTGCAGCAGATGAAGATCCATTGGTAAATTGATCAGGATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000647117.1
CDS TCA 90 bp AAAATCCTGATCAATTTACCAATGGATCTTCATCTGCTGCAATTGTaGAAGCTCGTTCGTCTTAATTCTGTTCAGATCTGTAAAATCAGC +
Preference number: 5 (lower is better)
Translates to: KILINLPMDLHLLQL*KLVRLNSVQICKIS
Trigger: GCTGATTTTACAGATCTGAACAGAATTAAGACGAACGAGCTTTCACAATTGCAGCAGATGAAGATCCATTGGTAAATTGATCAGGATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646942.1
CDS TCA 90 bp AACACACTTCACTTTAATACATTTGCATCTGCAACTTCTCCTCTTTaGAAGAACTGGGGGAAAACAGGGAGAATGTACCTAAATTTAGTA +
Preference number: 5 (lower is better)
Translates to: NTLHFNTFASATSPL*KNWGKTGRMYLNLV
Trigger: TACTAAATTTAGGTACATTCTCCCTGTTTTCCCCCAGTTCTTTCAAAGAGGAGAAGTTGCAGATGCAAATGTATTAAAGTGAAGTGTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650280.1
CDS-3UTR CAA 90 bp ACAAAAACAAAAACTTCTCACAGATTGGTAGCAAGCAGTTCAGACCACTTTAACTTTTTCCCAAACTCCTaGAAACTTTCGTCCAATTCT +
Preference number: 5 (lower is better)
Translates to: TKTKTSHRLVASSSDHFNFFPNS*KLSSNS
Trigger: AGAATTGGACGAAAGTTTCAAGGAGTTTGGGAAAAA...GTTAAAGTGGTCTGAACTGCTTGCTACCAATCTGTGAGAAGTTTTTGTTTTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000295900.10
ENST00000487717.5
ENST00000674280.1
CDS TCA 90 bp AAAATCCTGATCAATTTACCAATGGATCTTCATCTGCTGCAATTGTaGAAGCTCGTTCGTCTTAATTCTGTTCAGATAAGTTCAAAGTCT +
Preference number: 5 (lower is better)
Translates to: KILINLPMDLHLLQL*KLVRLNSVQISSKS
Trigger: AGACTTTGAACTTATCTGAACAGAATTAAGACGAACGAGCTTTCACAATTGCAGCAGATGAAGATCCATTGGTAAATTGATCAGGATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643464.1
CDS GCA 72 bp CCCTTCGGCCGCTTGCATCCCCGGGCCCGGCCCGGCTaGCCCGCTCCTTCCTTCCGTCCGCGCGTCCGTCCG +
Preference number: 6 (lower is better)
Translates to: PFGRLHPRARPG*PAPSFRPRVRP
Trigger: CGGACGGACGCGCGGACGGAAGGAAGGAGCGGGGCAGCCGGGCCGGGCCCGGGGATGCAAGCGGCCGAAGGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487717.5
CDS GCA 72 bp CAAGCCCCCGGACTGGAGCCAGGGCGAAGTCGGAAATaGAGCCACCTATGGAGGAGCCGGCCGGCCGGCCCC +
Preference number: 6 (lower is better)
Translates to: QAPGLEPGRSRK*SHLWRSRPAGP
Trigger: GGGGCCGGCCGGCCGGCTCCTCCATAGGTGGCTGCATTTCCGACTTCGCCCTGGCTCCAGTCCGGGGGCTTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487717.5
CDS GCA 72 bp ACTGTCCCAGCATCACTTCAGGACTGGGCAGAGGCCTaGGCTCCCCGACCGTCGCCATTGCGGCGGCCGAGG +
Preference number: 6 (lower is better)
Translates to: TVPASLQDWAEA*APRPSPLRRPR
Trigger: CCTCGGCCGCCGCAATGGCGACGGTCGGGGAGCGCAGGCCTCTGCCCAGTCCTGAAGTGATGCTGGGACAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS CCA 72 bp ATTGGGTGCCGGGTGAGGACGATGGCAACACGCTCCTaGTCGCTTCGCGAACTCCTCCGGGAGGTCGCCAAG +
Preference number: 6 (lower is better)
Translates to: IGCRVRTMATRS*SLRELLREVAK
Trigger: CTTGGCGACCTCCCGGAGGAGTTCGCGAAGCGACCAGGAGCGTGTTGCCATCGTCCTCACCCGGCACCCAAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000474513.6
ENST00000647117.1
CDS TCA 72 bp CGAAATCCCGACTCTGTGGTGGAATTGGGTGCCGGGTaGGGACGATGGCAACACGCTCCTGGTCGCTTCGCG +
Preference number: 6 (lower is better)
Translates to: RNPDSVVELGAG*GRWQHAPGRFA
Trigger: CGCGAAGCGACCAGGAGCGTGTTGCCATCGTCCTCACCCGGCACCCAATTCCACCACAGAGTCGGGATTTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000474513.6
ENST00000647117.1
CDS TCA 72 bp AGGAATCACTCCGTGAGGGTTTTGGTGCGGCTCCTGTaGCGTTCTAGGAGGGGCGGGATGCGGGTCCCTGAG +
Preference number: 6 (lower is better)
Translates to: RNHSVRVLVRLL*RSRRGGMRVPE
Trigger: CTCAGGGACCCGCATCCCGCCCCTCCTAGAACGTCACAGGAGCCGCACCAAAACCCTCACGGAGTGATTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000295900.10
ENST00000466529.1
ENST00000472569.1
ENST00000474112.5
ENST00000484332.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS CCA 72 bp ACAGATTCCACGACTGTCCCAGCATCACTTCAGGACTaGGCAGAGGCCTGCGCTCCCCGACCGTCGCCATTG +
Preference number: 6 (lower is better)
Translates to: TDSTTVPASLQD*AEACAPRPSPL
Trigger: CAATGGCGACGGTCGGGGAGCGCAGGCCTCTGCCCAGTCCTGAAGTGATGCTGGGACAGTCGTGGAATCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS CCA 72 bp GAGGGTGTGGAGATTCATGGACTGGAGGAGGGTCAATaGGGGCACTCCCACCTTGCTGAGCAGGGCAGCCTG +
Preference number: 6 (lower is better)
Translates to: EGVEIHGLEEGQ*GHSHLAEQGSL
Trigger: CAGGCTGCCCTGCTCAGCAAGGTGGGAGTGCCCCCATTGACCCTCCTCCAGTCCATGAATCTCCACACCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000484332.1
ENST00000484668.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS CCA 72 bp TCGCTCCGGCGAAGTTTGCACGTCAAGCCCCCGGACTaGAGCCAGGGCGAAGTCGGAAATGCAGCCACCTAT +
Preference number: 6 (lower is better)
Translates to: SLRRSLHVKPPD*SQGEVGNAATY
Trigger: ATAGGTGGCTGCATTTCCGACTTCGCCCTGGCTCCAGTCCGGGGGCTTGACGTGCAAACTTCGCCGGAGCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487717.5
CDS GCA 72 bp TCACCGACGAAATCCCGACTCTGTGGTGGAATTGGGTaGCGGGTGAGGACGATGGCAACACGCTCCTGGTCG +
Preference number: 6 (lower is better)
Translates to: SPTKSRLCGGIG*RVRTMATRSWS
Trigger: CGACCAGGAGCGTGTTGCCATCGTCCTCACCCGGCACCCAATTCCACCACAGAGTCGGGATTTCGTCGGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000474513.6
ENST00000647117.1
CDS CCA 72 bp CGCCCTCCTCACTGGATAACCGAGAAGCTGGCTCAGTaGCAGGCAGGGGAGGGTGTGGAGATTCATGGACTG +
Preference number: 6 (lower is better)
Translates to: RPPHWITEKLAQ*QAGEGVEIHGL
Trigger: CAGTCCATGAATCTCCACACCCTCCCCTGCCTGCCACTGAGCCAGCTTCTCGGTTATCCAGTGAGGAGGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000484332.1
ENST00000484668.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS CCA 72 bp ACGATCACCGACGAAATCCCGACTCTGTGGTGGAATTaGGTGCCGGGTGAGGACGATGGCAACACGCTCCTG +
Preference number: 6 (lower is better)
Translates to: TITDEIPTLWWN*VPGEDDGNTLL
Trigger: CAGGAGCGTGTTGCCATCGTCCTCACCCGGCACCCAATTCCACCACAGAGTCGGGATTTCGTCGGTGATCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000474513.6
ENST00000647117.1
CDS CCA 72 bp CCCATCACGATCACCGACGAAATCCCGACTCTGTGGTaGAATTGGGTGCCGGGTGAGGACGATGGCAACACG +
Preference number: 6 (lower is better)
Translates to: PITITDEIPTLW*NWVPGEDDGNT
Trigger: CGTGTTGCCATCGTCCTCACCCGGCACCCAATTCCACCACAGAGTCGGGATTTCGTCGGTGATCGTGATGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000474513.6
ENST00000647117.1
CDS CCA 72 bp CACCCCATCACGATCACCGACGAAATCCCGACTCTGTaGTGGAATTGGGTGCCGGGTGAGGACGATGGCAAC +
Preference number: 6 (lower is better)
Translates to: HPITITDEIPTL*WNWVPGEDDGN
Trigger: GTTGCCATCGTCCTCACCCGGCACCCAATTCCACCACAGAGTCGGGATTTCGTCGGTGATCGTGATGGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000474513.6
ENST00000647117.1
CDS GCA 72 bp CACAGGTGTGACAGTTCGCACTCAAGGCAGTGCCCATaGTGGGGAGGAGGAAACTCTGGCATTCACAGTGGG +
Preference number: 6 (lower is better)
Translates to: HRCDSSHSRQCP*WGGGNSGIHSG
Trigger: CCCACTGTGAATGCCAGAGTTTCCTCCTCCCCAGCATGGGCACTGCCTTGAGTGCGAACTGTCACACCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643453.1
CDS GCA 72 bp AGCACACACAGGTGTGACAGTTCGCACTCAAGGCAGTaGCCATGCTGGGGAGGAGGAAACTCTGGCATTCAC +
Preference number: 6 (lower is better)
Translates to: STHRCDSSHSRQ*PCWGGGNSGIH
Trigger: GTGAATGCCAGAGTTTCCTCCTCCCCAGCATGGGCACTGCCTTGAGTGCGAACTGTCACACCTGTGTGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643453.1
CDS CCA 72 bp AGGTGTGACAGTTCGCACTCAAGGCAGTGCCCATGCTaGGGAGGAGGAAACTCTGGCATTCACAGTGGGCTT +
Preference number: 6 (lower is better)
Translates to: RCDSSHSRQCPC*GGGNSGIHSGL
Trigger: AAGCCCACTGTGAATGCCAGAGTTTCCTCCTCCCCAGCATGGGCACTGCCTTGAGTGCGAACTGTCACACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643453.1
CDS GCA 72 bp AACATAGCCGCGTGCTTGCTGACTCCCACACTGGCATaGCCAGTCAGGGTTCTAGATCCTTCAGGAAAGGAG +
Preference number: 6 (lower is better)
Translates to: NIAACLLTPTLA*PVRVLDPSGKE
Trigger: CTCCTTTCCTGAAGGATCTAGAACCCTGACTGGGCATGCCAGTGTGGGAGTCAGCAAGCACGCGGCTATGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477516.1
CDS CAA 72 bp GCCCCTGGGATGGTGCCTGTGTGTTTCATGTGGACATaGTTCACGGCTGGCACTTTGGCAACCTTTGTGGGT +
Preference number: 6 (lower is better)
Translates to: APGMVPVCFMWT*FTAGTLATFVG
Trigger: ACCCACAAAGGTTGCCAAAGTGCCAGCCGTGAACAATGTCCACATGAAACACACAGGCACCATCCCAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000484332.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS CAA 90 bp AGTCCTTGTGCCCCTGGGATGGTGCCTGTGTGTTTCATGTGGACATaGTTCACGGCTGGCACTTTGGCAACCTTTGTGGGTTTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: SPCAPGMVPVCFMWT*FTAGTLATFVGLLL
Trigger: CAGCAGCAAACCCACAAAGGTTGCCAAAGTGCCAGCCGTGAACAATGTCCACATGAAACACACAGGCACCATCCCAGGGGCACAAGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000484332.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS TCA 72 bp AGGAAAGACAGAACTGCCTCTGAGTACCGGAGGCTGTaGAGCATGAGAGTGACAATGCCTAGCCCTGAGCGT +
Preference number: 6 (lower is better)
Translates to: RKDRTASEYRRL*SMRVTMPSPER
Trigger: ACGCTCAGGGCTAGGCATTGTCACTCTCATGCTTCACAGCCTCCGGTACTCAGAGGCAGTTCTGTCTTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477516.1
CDS GCA 72 bp GGGAACTGTTCATCAGTCCTTGTGCCCCTGGGATGGTaGCTGTGTGTTTCATGTGGACATTGTTCACGGCTG +
Preference number: 6 (lower is better)
Translates to: GNCSSVLVPLGW*LCVSCGHCSRL
Trigger: CAGCCGTGAACAATGTCCACATGAAACACACAGGCACCATCCCAGGGGCACAAGGACTGATGAACAGTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000484332.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS GCA 72 bp TGGCTGATGAAGGAGGGAACTGTTCATCAGTCCTTGTaGCCCTGGGATGGTGCCTGTGTGTTTCATGTGGAC +
Preference number: 6 (lower is better)
Translates to: WLMKEGTVHQSL*PWDGACVFHVD
Trigger: GTCCACATGAAACACACAGGCACCATCCCAGGGGCACAAGGACTGATGAACAGTTCCCTCCTTCATCAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS GCA 72 bp GAGCTATGTCTTCTTTCCAGTGGAGCTTTCAGCTCCTaGGCAGAAGGGCTGCTTTGGAGAGGCGTCTTGCTA +
Preference number: 6 (lower is better)
Translates to: ELCLLSSGAFSS*AEGLLWRGVLL
Trigger: TAGCAAGACGCCTCTCCAAAGCAGCCCTTCTGCGCAGGAGCTGAAAGCTCCACTGGAAAGAAGACATAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475897.1
ENST00000484332.1
CDS CCA 72 bp CCATCGCCCCTGAAGCAGCAGGCTGTGCATTTAGTGTaGTTCCATGAGCTGGTACCGATTTGCTATTTGGGG +
Preference number: 6 (lower is better)
Translates to: PSPLKQQAVHLV*FHELVPICYLG
Trigger: CCCCAAATAGCAAATCGGTACCAGCTCATGGAACCACACTAAATGCACAGCCTGCTGCTTCAGGGGCGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000477516.1
ENST00000484332.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS CCA 72 bp GGAGGGAACTGTTCATCAGTCCTTGTGCCCCTGGGATaGTGCCTGTGTGTTTCATGTGGACATTGTTCACGG +
Preference number: 6 (lower is better)
Translates to: GGNCSSVLVPLG*CLCVSCGHCSR
Trigger: CCGTGAACAATGTCCACATGAAACACACAGGCACCATCCCAGGGGCACAAGGACTGATGAACAGTTCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000484332.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS CCA 72 bp CCCATGCTGGGGAGGAGGAAACTCTGGCATTCACAGTaGGCTTTTACATCTTTGGTGGCACAGGCCATGAAC +
Preference number: 6 (lower is better)
Translates to: PMLGRRKLWHSQ*AFTSLVAQAMN
Trigger: GTTCATGGCCTGTGCCACCAAAGATGTAAAAGCCCACTGTGAATGCCAGAGTTTCCTCCTCCCCAGCATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643453.1
CDS CCA 72 bp CTCAAGGCAGTGCCCATGCTGGGGAGGAGGAAACTCTaGCATTCACAGTGGGCTTTTACATCTTTGGTGGCA +
Preference number: 6 (lower is better)
Translates to: LKAVPMLGRRKL*HSQWAFTSLVA
Trigger: TGCCACCAAAGATGTAAAAGCCCACTGTGAATGCCAGAGTTTCCTCCTCCCCAGCATGGGCACTGCCTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643453.1
CDS CAA 72 bp CTTTCGTCCAATTCTGTCCCGTCCTTCCCAGGAAGTTaGGAAGCCTCAACCCACAGATTCCACGACTGTCCC +
Preference number: 6 (lower is better)
Translates to: LSSNSVPSFPGS*EASTHRFHDCP
Trigger: GGGACAGTCGTGGAATCTGTGGGTTGAGGCTTCCAAACTTCCTGGGAAGGACGGGACAGAATTGGACGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS CAA 72 bp TTTACATCTTTGGTGGCACAGGCCATGAACAGACTCTaGGGGGTGCCTACCCAACCCCATCATCTCCTAGGC +
Preference number: 6 (lower is better)
Translates to: FTSLVAQAMNRL*GVPTQPHHLLG
Trigger: GCCTAGGAGATGATGGGGTTGGGTAGGCACCCCCAAGAGTCTGTTCATGGCCTGTGCCACCAAAGATGTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643453.1
CDS CAA 90 bp GGGACGTGCCTTTGGCTGATGAAGGAGGGAACTGTTCATCAGTCCTaGTGCCCCTGGGATGGTGCCTGTGTGTTTCATGTGGACATTGTT +
Preference number: 6 (lower is better)
Translates to: GTCLWLMKEGTVHQS*CPWDGACVFHVDIV
Trigger: AACAATGTCCACATGAAACACACAGGCACCATCCCAGGGGCACAAGGACTGATGAACAGTTCCCTCCTTCATCAGCCAAAGGCACGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000484332.1
ENST00000487717.5
ENST00000674280.1
CDS TCA 72 bp GGTGTCATGATTCTACCATGGGGAACTCTACTTTGCTaGATGGGATGCATTGGCCTGGTGTTCCCCCTGAGC +
Preference number: 6 (lower is better)
Translates to: GVMILPWGTLLC*MGCIGLVFPLS
Trigger: GCTCAGGGGGAACACCAGGCCAATGCATCCCATTCAGCAAAGTAGAGTTCCCCATGGTAGAATCATGACACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000484332.1
ENST00000487717.5
ENST00000488239.1
ENST00000522345.2
ENST00000674280.1
CDS TCA 72 bp ACTCCACATTGTGATGTCGGCACAGAGTTTGTCCGGTaGGGAATACGTGTGGAGATGGGTGAGGTGGTACTG +
Preference number: 6 (lower is better)
Translates to: TPHCDVGTEFVR*GIRVEMGEVVL
Trigger: CAGTACCACCTCACCCATCTCCACACGTATTCCTCACCGGACAAACTCTGTGCCGACATCACAATGTGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000477516.1
ENST00000484332.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS TCA 72 bp AGCCACAGCATTCCTCATAGGAACATGAGTTGGAGATaGAGCTGGTCCTGGAACCCATCTCTGCCACCACCT +
Preference number: 6 (lower is better)
Translates to: SHSIPHRNMSWR*SWSWNPSLPPP
Trigger: AGGTGGTGGCAGAGATGGGTTCCAGGACCAGCTTCATCTCCAACTCATGTTCCTATGAGGAATGCTGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647117.1
ENST00000674254.1
CDS GCA 72 bp GTTTCTTTTCCAGAGTGGGCGGTGCAGGAAGCCCTTTaGCATTCAGAATCTGTCCAGGTGAAGGCAAGGTTG +
Preference number: 6 (lower is better)
Translates to: VSFPEWAVQEAL*HSESVQVKARL
Trigger: CAACCTTGCCTTCACCTGGACAGATTCTGAATGGCAAAGGGCTTCCTGCACCGCCCACTCTGGAAAAGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295900.10
ENST00000466529.1
ENST00000474112.5
ENST00000484332.1
ENST00000487717.5
ENST00000488239.1
ENST00000522345.2
ENST00000674280.1
CDS GCA 72 bp ATGAGGATGAAGAGGACACTTGTCTGGATTGCATACTaGACACAGGATCCATCGCCCCTGAAGCAGCAGGCT +
Preference number: 6 (lower is better)
Translates to: MRMKRTLVWIAY*TQDPSPLKQQA
Trigger: AGCCTGCTGCTTCAGGGGCGATGGATCCTGTGTGCAGTATGCAATCCAGACAAGTGTCCTCTTCATCCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000477516.1
ENST00000484332.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS GCA 72 bp GAAGGGGATGAGGATGAAGAGGACACTTGTCTGGATTaGATACTGCACACAGGATCCATCGCCCCTGAAGCA +
Preference number: 6 (lower is better)
Translates to: EGDEDEEDTCLD*ILHTGSIAPEA
Trigger: TGCTTCAGGGGCGATGGATCCTGTGTGCAGTATGCAATCCAGACAAGTGTCCTCTTCATCCTCATCCCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000477516.1
ENST00000484332.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS GCA 72 bp GCTCCTGCGCAGAAGGGCTGCTTTGGAGAGGCGTCTTaGTACCTTCCATTCACAGAATTTGGTTGTGCTTCA +
Preference number: 6 (lower is better)
Translates to: APAQKGCFGEAS*YLPFTEFGCAS
Trigger: TGAAGCACAACCAAATTCTGTGAATGGAAGGTAGCAAGACGCCTCTCCAAAGCAGCCCTTCTGCGCAGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475897.1
ENST00000484332.1
CDS GCA 72 bp TACCTGATGAAGGAGGGAACTGTTCATCAGTCCTTGTaGCCCTGGGATGGTGCCTGTGTGTTTCATGTGGAC +
Preference number: 6 (lower is better)
Translates to: YLMKEGTVHQSL*PWDGACVFHVD
Trigger: GTCCACATGAAACACACAGGCACCATCCCAGGGGCACAAGGACTGATGAACAGTTCCCTCCTTCATCAGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS GCA 72 bp ATCCTGATGAAGGAGGGAACTGTTCATCAGTCCTTGTaGCCCTGGGATGGTGCCTGTGTGTTTCATGTGGAC +
Preference number: 6 (lower is better)
Translates to: ILMKEGTVHQSL*PWDGACVFHVD
Trigger: GTCCACATGAAACACACAGGCACCATCCCAGGGGCACAAGGACTGATGAACAGTTCCCTCCTTCATCAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522345.2
CDS GCA 72 bp TATCTATCCCACTGGAGGTCAAATCAGCTGCACTGGTaGCTGTTTCCTCATCCACCTCTCACCACCCCATCA +
Preference number: 6 (lower is better)
Translates to: YLSHWRSNQLHW*LFPHPPLTTPS
Trigger: TGATGGGGTGGTGAGAGGTGGATGAGGAAACAGGCACCAGTGCAGCTGATTTGACCTCCAGTGGGATAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642539.1
ENST00000647117.1
CDS CCA 72 bp GGTGCCTGTGTGTTTCATGTGGACATTGTTCACGGCTaGCACTTTGGCAACCTTTGTGGGTTTGCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: GACVFHVDIVHG*HFGNLCGFAAA
Trigger: AGCAGCAGCAAACCCACAAAGGTTGCCAAAGTGCCAGCCGTGAACAATGTCCACATGAAACACACAGGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000484332.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS CCA 72 bp AAGGTGGGAGAAAGAGTTGGAGGGCCTGGCTTACCTTaGAAGACTGGGGGTGTGAGGTTTAGGTTTACTAGC +
Preference number: 6 (lower is better)
Translates to: KVGERVGGPGLP*KTGGVRFRFTS
Trigger: GCTAGTAAACCTAAACCTCACACCCCCAGTCTTCCAAGGTAAGCCAGGCCCTCCAACTCTTTCTCCCACCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466529.1
ENST00000472569.1
CDS CAA 72 bp GGTTTCTTTTCCAGAGTGGGCGGTGCAGGAAGCCCTTaGCCATTCAGAATCTGTCCAGGTGAAGGCAAGGTT +
Preference number: 6 (lower is better)
Translates to: GFFSRVGGAGSP*PFRICPGEGKV
Trigger: AACCTTGCCTTCACCTGGACAGATTCTGAATGGCAAAGGGCTTCCTGCACCGCCCACTCTGGAAAAGAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295900.10
ENST00000466529.1
ENST00000474112.5
ENST00000484332.1
ENST00000487717.5
ENST00000488239.1
ENST00000522345.2
ENST00000674280.1
CDS CAA 72 bp GGCACTTTGGCAACCTTTGTGGGTTTGCTGCTGCTGTaGTTGATGCTGCTCGAGCTGGGTGAGCACTTTCTT +
Preference number: 6 (lower is better)
Translates to: GTLATFVGLLLL*LMLLELGEHFL
Trigger: AAGAAAGTGCTCACCCAGCTCGAGCAGCATCAACAACAGCAGCAGCAAACCCACAAAGGTTGCCAAAGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000484332.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS CAA 72 bp AGCTCCTGCGCAGAAGGGCTGCTTTGGAGAGGCGTCTaGCTACCTTCCATTCACAGAATTTGGTTGTGCTTC +
Preference number: 6 (lower is better)
Translates to: SSCAEGLLWRGV*LPSIHRIWLCF
Trigger: GAAGCACAACCAAATTCTGTGAATGGAAGGTAGCAAGACGCCTCTCCAAAGCAGCCCTTCTGCGCAGGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475897.1
ENST00000484332.1
CDS CAA 90 bp CACTTTCACAGAGGGTGTCATGATTCTACCATGGGGAACTCTACTTaGCTGAATGGGATGCATTGGCCTGGTGTTCCCCCTGAGCTGCAG +
Preference number: 6 (lower is better)
Translates to: HFHRGCHDSTMGNST*LNGMHWPGVPPELQ
Trigger: CTGCAGCTCAGGGGGAACACCAGGCCAATGCATCCCATTCAGCAAAGTAGAGTTCCCCATGGTAGAATCATGACACCCTCTGTGAAAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000484332.1
ENST00000487717.5
ENST00000488239.1
ENST00000522345.2
ENST00000674280.1
CDS CAA 90 bp GGAGCTTTCAGCTCCTGCGCAGAAGGGCTGCTTTGGAGAGGCGTCTaGCTACCTTCCATTCACAGAATTTGGTTGTGCTTCATTGCACAC +
Preference number: 6 (lower is better)
Translates to: GAFSSCAEGLLWRGV*LPSIHRIWLCFIAH
Trigger: GTGTGCAATGAAGCACAACCAAATTCTGTGAATGGAAGGTAGCAAGACGCCTCTCCAAAGCAGCCCTTCTGCGCAGGAGCTGAAAGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475897.1
ENST00000484332.1
CDS CAA 90 bp GGGAAGAAGGAAAATACTGAAGTGGGAGGAACGGCCAAAGGCGGCTaGCTGGATGAGCTATGTCTTCTTTCCAGTGGAGCTTTCAGCTCC +
Preference number: 6 (lower is better)
Translates to: GKKENTEVGGTAKGG*LDELCLLSSGAFSS
Trigger: GGAGCTGAAAGCTCCACTGGAAAGAAGACATAGCTCATCCAGCAAGCCGCCTTTGGCCGTTCCTCCCACTTCAGTATTTTCCTTCTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475897.1
ENST00000484332.1
CDS CAA 90 bp AAACCCTCTTGGCCATACTCACATTCTACCATGGGGAACTCTACTTaGCTGAATGGGATGCATTGGCCTGGTGTTCCCCCTGAGCTGCAG +
Preference number: 6 (lower is better)
Translates to: KPSWPYSHSTMGNST*LNGMHWPGVPPELQ
Trigger: CTGCAGCTCAGGGGGAACACCAGGCCAATGCATCCCATTCAGCAAAGTAGAGTTCCCCATGGTAGAATGTGAGTATGGCCAAGAGGGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475897.1
CDS CAA 90 bp TTGTCTTCAGGTTTCTTTTCCAGAGTGGGCGGTGCAGGAAGCCCTTaGCCATTCAGAATCTGTCCAGGTGAAGGCAAGGTTGGCTTTGGT +
Preference number: 6 (lower is better)
Translates to: LSSGFFSRVGGAGSP*PFRICPGEGKVGFG
Trigger: ACCAAAGCCAACCTTGCCTTCACCTGGACAGATTCTGAATGGCAAAGGGCTTCCTGCACCGCCCACTCTGGAAAAGAAACCTGAAGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295900.10
ENST00000466529.1
ENST00000474112.5
ENST00000484332.1
ENST00000487717.5
ENST00000488239.1
ENST00000522345.2
ENST00000674280.1
CDS CAA 90 bp TCTTCTTTCCAGTGGAGCTTTCAGCTCCTGCGCAGAAGGGCTGCTTaGGAGAGGCGTCTTGCTACCTTCCATTCACAGAATTTGGTTGTG +
Preference number: 6 (lower is better)
Translates to: SSFQWSFQLLRRRAA*ERRLATFHSQNLVV
Trigger: CACAACCAAATTCTGTGAATGGAAGGTAGCAAGACGCCTCTCCAAAGCAGCCCTTCTGCGCAGGAGCTGAAAGCTCCACTGGAAAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475897.1
ENST00000484332.1
CDS TCA 72 bp CCTGAAGCAGCAGGCTGTGCATTTAGTGTGGTTCCATaGGCTGGTACCGATTTGCTATTTGGGGAGATGCAG +
Preference number: 6 (lower is better)
Translates to: PEAAGCAFSVVP*AGTDLLFGEMQ
Trigger: CTGCATCTCCCCAAATAGCAAATCGGTACCAGCTCATGGAACCACACTAAATGCACAGCCTGCTGCTTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000477516.1
ENST00000484332.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS TCA 72 bp TTTCCTGAGCCGCCACTGGTACTGCTACTGGCATTTTaGCAGTTAGTGCTGTTACCAGAAGACTCCTTGGGC +
Preference number: 6 (lower is better)
Translates to: FPEPPLVLLLAF*QLVLLPEDSLG
Trigger: GCCCAAGGAGTCTTCTGGTAACAGCACTAACTGTCAAAATGCCAGTAGCAGTACCAGTGGCGGCTCAGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000484332.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS TCA 72 bp CATACTCACATTCTACCATGGGGAACTCTACTTTGCTaGATGGGATGCATTGGCCTGGTGTTCCCCCTGAGC +
Preference number: 6 (lower is better)
Translates to: HTHILPWGTLLC*MGCIGLVFPLS
Trigger: GCTCAGGGGGAACACCAGGCCAATGCATCCCATTCAGCAAAGTAGAGTTCCCCATGGTAGAATGTGAGTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475897.1
CDS TCA 72 bp TCTCTTAGAGTGCCCTGTCTCCTAAAACCAAGGAAATaGACAGGGTCTGATGATGCCCACCTACAGCCAGCG +
Preference number: 6 (lower is better)
Translates to: SLRVPCLLKPRK*TGSDDAHLQPA
Trigger: CGCTGGCTGTAGGTGGGCATCATCAGACCCTGTTCATTTCCTTGGTTTTAGGAGACAGGGCACTCTAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650280.1
CDS GCA 72 bp GCTAATCGTATCTATCCCACTGGAGGTCAAATCAGCTaGACTGGTGCCTGTTTCCTCATCCACCTCTCACCA +
Preference number: 6 (lower is better)
Translates to: ANRIYPTGGQIS*TGACFLIHLSP
Trigger: TGGTGAGAGGTGGATGAGGAAACAGGCACCAGTGCAGCTGATTTGACCTCCAGTGGGATAGATACGATTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000474513.6
ENST00000642539.1
ENST00000643464.1
ENST00000647117.1
ENST00000650280.1
CDS GCA 72 bp GGAATTGTCTTCAGGTTTCTTTTCCAGAGTGGGCGGTaGAGGAAGCCCTTTGCCATTCAGAATCTGTCCAGG +
Preference number: 6 (lower is better)
Translates to: GIVFRFLFQSGR*RKPFAIQNLSR
Trigger: CCTGGACAGATTCTGAATGGCAAAGGGCTTCCTGCACCGCCCACTCTGGAAAAGAAACCTGAAGACAATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295900.10
ENST00000466529.1
ENST00000474112.5
ENST00000484332.1
ENST00000487717.5
ENST00000488239.1
ENST00000522345.2
ENST00000674280.1
CDS GCA 72 bp ACTGGTGGGATTTTCTTCCATAGCTGTGCATTCAGATaGTTCTCCACCATGAGGTTGAGGGCGCAGCGAAGT +
Preference number: 6 (lower is better)
Translates to: TGGIFFHSCAFR*FSTMRLRAQRS
Trigger: ACTTCGCTGCGCCCTCAACCTCATGGTGGAGAAGCATCTGAATGCACAGCTATGGAAGAAAATCCCACCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000477516.1
ENST00000484332.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS GCA 72 bp AGGAGGAAGAGTGAACCAACAGTGGGGAACTGTTTTTaGGTTTCTTTCCTGAGCCGCCACTGGTACTGCTAC +
Preference number: 6 (lower is better)
Translates to: RRKSEPTVGNCF*VSFLSRHWYCY
Trigger: GTAGCAGTACCAGTGGCGGCTCAGGAAAGAAACGCAAAAACAGTTCCCCACTGTTGGTTCACTCTTCCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000484332.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS GCA 72 bp TATCTATCCCACTGGAGGTCAAATCAGCTGCACTGGTaGCTGTTTCCTCATCCACCTCTCACCACAGACAGT +
Preference number: 6 (lower is better)
Translates to: YLSHWRSNQLHW*LFPHPPLTTDS
Trigger: ACTGTCTGTGGTGAGAGGTGGATGAGGAAACAGGCACCAGTGCAGCTGATTTGACCTCCAGTGGGATAGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643464.1
CDS CCA 72 bp ATACTGAAGTGGGAGGAACGGCCAAAGGCGGCTTGCTaGATGAGCTATGTCTTCTTTCCAGTGGAGCTTTCA +
Preference number: 6 (lower is better)
Translates to: ILKWEERPKAAC*MSYVFFPVELS
Trigger: TGAAAGCTCCACTGGAAAGAAGACATAGCTCATCCAGCAAGCCGCCTTTGGCCGTTCCTCCCACTTCAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475897.1
ENST00000484332.1
CDS CCA 72 bp CCACCTGGCTCACTTTATTCCCCTCTCTGGTCTCTCTaGCCTCTACAGACTTTTGAACTTGTGCCTCCTCTT +
Preference number: 6 (lower is better)
Translates to: PPGSLYSPLWSL*PLQTFELVPPL
Trigger: AAGAGGAGGCACAAGTTCAAAAGTCTGTAGAGGCCAGAGAGACCAGAGAGGGGAATAAAGTGAGCCAGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643464.1
CDS CAA 72 bp TGTGTCTTGCATGTCAAAGACCGGGTGCAGGGCTTCTaGGTGTCGAGATCAATAACCCCACAGTGGATGTCA +
Preference number: 6 (lower is better)
Translates to: CVLHVKDRVQGF*VSRSITPQWMS
Trigger: TGACATCCACTGTGGGGTTATTGATCTCGACACCAAGAAGCCCTGCACCCGGTCTTTGACATGCAAGACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295900.10
ENST00000466529.1
ENST00000472569.1
ENST00000474112.5
ENST00000484332.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS CAA 72 bp GAAAATACTGAAGTGGGAGGAACGGCCAAAGGCGGCTaGCTGGATGAGCTATGTCTTCTTTCCAGTGGAGCT +
Preference number: 6 (lower is better)
Translates to: ENTEVGGTAKGG*LDELCLLSSGA
Trigger: AGCTCCACTGGAAAGAAGACATAGCTCATCCAGCAAGCCGCCTTTGGCCGTTCCTCCCACTTCAGTATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475897.1
ENST00000484332.1
CDS CAA 72 bp AGGAAACTCTGGCATTCACAGTGGGCTTTTACATCTTaGGTGGCACAGGCCATGAACAGACTCTTGGGGGTG +
Preference number: 6 (lower is better)
Translates to: RKLWHSQWAFTS*VAQAMNRLLGV
Trigger: CACCCCCAAGAGTCTGTTCATGGCCTGTGCCACCAAAGATGTAAAAGCCCACTGTGAATGCCAGAGTTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643453.1
CDS CAA 90 bp CAGTCCATTTCCTACCTGATGAAGGAGGGAACTGTTCATCAGTCCTaGTGCCCCTGGGATGGTGCCTGTGTGTTTCATGTGGACATTGTT +
Preference number: 6 (lower is better)
Translates to: QSISYLMKEGTVHQS*CPWDGACVFHVDIV
Trigger: AACAATGTCCACATGAAACACACAGGCACCATCCCAGGGGCACAAGGACTGATGAACAGTTCCCTCCTTCATCAGGTAGGAAATGGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474112.5
CDS TCA 72 bp GGACGTTCACCGCATTTGCTTTATTCGTCACACAGTTaGGGCCGATGCTATGGGAAGATGTTACCGTTGAGG +
Preference number: 6 (lower is better)
Translates to: GRSPHLLYSSHS*GRCYGKMLPLR
Trigger: CCTCAACGGTAACATCTTCCCATAGCATCGGCCTCAACTGTGTGACGAATAAAGCAAATGCGGTGAACGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000484332.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS TCA 72 bp GCTTCATTGCACACTTGCTACTGCAGGCTTGCATCATaGTTTGGGTCTGCCCACCAACTCCAAATATGCTCC +
Preference number: 6 (lower is better)
Translates to: ASLHTCYCRLAS*FGSAHQLQICS
Trigger: GGAGCATATTTGGAGTTGGTGGGCAGACCCAAATCATGATGCAAGCCTGCAGTAGCAAGTGTGCAATGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475897.1
ENST00000484332.1
CDS GCA 72 bp CACTTGCTACTGCAGGCTTGCATCATGATTTGGGTCTaGCCACCAACTCCAAATATGCTCCATGTTTGGGCT +
Preference number: 6 (lower is better)
Translates to: HLLLQACIMIWV*PPTPNMLHVWA
Trigger: AGCCCAAACATGGAGCATATTTGGAGTTGGTGGGCAGACCCAAATCATGATGCAAGCCTGCAGTAGCAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475897.1
ENST00000484332.1
CDS CCA 72 bp TCAAATCGTTTTCTTCTACCCTGGACAGCCCTGCGCTaGGTTAAGGAATGTGTCTTGCATGTCAAAGACCGG +
Preference number: 6 (lower is better)
Translates to: SNRFLLPWTALR*VKECVLHVKDR
Trigger: CCGGTCTTTGACATGCAAGACACATTCCTTAACCCAGCGCAGGGCTGTCCAGGGTAGAAGAAAACGATTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295900.10
ENST00000466529.1
ENST00000472569.1
ENST00000474112.5
ENST00000484332.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS CCA 72 bp ATGAAGGAGGGAACTGTTCATCAGTCCTTGTGCCCCTaGGATGGTGCCTGTGTGTTTCATGTGGACATTGTT +
Preference number: 6 (lower is better)
Translates to: MKEGTVHQSLCP*DGACVFHVDIV
Trigger: AACAATGTCCACATGAAACACACAGGCACCATCCCAGGGGCACAAGGACTGATGAACAGTTCCCTCCTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000484332.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS CAA 72 bp CGGACGTTCACCGCATTTGCTTTATTCGTCACACAGTaGAGGCCGATGCTATGGGAAGATGTTACCGTTGAG +
Preference number: 6 (lower is better)
Translates to: RTFTAFALFVTQ*RPMLWEDVTVE
Trigger: CTCAACGGTAACATCTTCCCATAGCATCGGCCTCAACTGTGTGACGAATAAAGCAAATGCGGTGAACGTCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000484332.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS CAA 72 bp GTGTGTTTCATGTGGACATTGTTCACGGCTGGCACTTaGGCAACCTTTGTGGGTTTGCTGCTGCTGTTGTTG +
Preference number: 6 (lower is better)
Translates to: VCFMWTLFTAGT*ATFVGLLLLLL
Trigger: CAACAACAGCAGCAGCAAACCCACAAAGGTTGCCAAAGTGCCAGCCGTGAACAATGTCCACATGAAACACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000484332.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS CAA 90 bp ACACCTCCACTGGAAGAACGGTTGCTTCCACTTGCACTGCCTCCTTaGCTTTTGGACAGAGAAGGGAAGAAGGAAAATACTGAAGTGGGA +
Preference number: 6 (lower is better)
Translates to: TPPLEERLLPLALPP*LLDREGKKENTEVG
Trigger: TCCCACTTCAGTATTTTCCTTCTTCCCTTCTCTGTCCAAAAGCAAAGGAGGCAGTGCAAGTGGAAGCAACCGTTCTTCCAGTGGAGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000475897.1
ENST00000484332.1
ENST00000487717.5
ENST00000488239.1
ENST00000522345.2
ENST00000674280.1
CDS CAA 90 bp GTTAAGGAATGTGTCTTGCATGTCAAAGACCGGGTGCAGGGCTTCTaGGTGTCGAGATCAATAACCCCACAGTGGATGTCAGGATCAAAC +
Preference number: 6 (lower is better)
Translates to: VKECVLHVKDRVQGF*VSRSITPQWMSGSN
Trigger: GTTTGATCCTGACATCCACTGTGGGGTTATTGATCTCGACACCAAGAAGCCCTGCACCCGGTCTTTGACATGCAAGACACATTCCTTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295900.10
ENST00000466529.1
ENST00000472569.1
ENST00000474112.5
ENST00000484332.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS CAA 90 bp AGGGCTGCTTTGGAGAGGCGTCTTGCTACCTTCCATTCACAGAATTaGGTTGTGCTTCATTGCACACTTGCTACTGCAGGCTTGCATCAT +
Preference number: 6 (lower is better)
Translates to: RAALERRLATFHSQN*VVLHCTLATAGLHH
Trigger: ATGATGCAAGCCTGCAGTAGCAAGTGTGCAATGAAGCACAACCAAATTCTGTGAATGGAAGGTAGCAAGACGCCTCTCCAAAGCAGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475897.1
ENST00000484332.1
CDS GCA 72 bp TGGTTGTGCTTCATTGCACACTTGCTACTGCAGGCTTaGATCATGATTTGGGTCTGCCCACCAACTCCAAAT +
Preference number: 6 (lower is better)
Translates to: WLCFIAHLLLQA*IMIWVCPPTPN
Trigger: ATTTGGAGTTGGTGGGCAGACCCAAATCATGATGCAAGCCTGCAGTAGCAAGTGTGCAATGAAGCACAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475897.1
ENST00000484332.1
CDS CCA 72 bp TACAATCTGCTGCTGAGAAGGGATTGCCACATTAGATaGATCATGGACCGGATGGTTTCTCACAGTTCCACC +
Preference number: 6 (lower is better)
Translates to: YNLLLRRDCHIR*IMDRMVSHSST
Trigger: GGTGGAACTGTGAGAAACCATCCGGTCCATGATCCATCTAATGTGGCAATCCCTTCTCAGCAGCAGATTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643464.1
CDS CAA 72 bp CATTGCACACTTGCTACTGCAGGCTTGCATCATGATTaGGGTCTGCCCACCAACTCCAAATATGCTCCATGT +
Preference number: 6 (lower is better)
Translates to: HCTLATAGLHHD*GLPTNSKYAPC
Trigger: ACATGGAGCATATTTGGAGTTGGTGGGCAGACCCAAATCATGATGCAAGCCTGCAGTAGCAAGTGTGCAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475897.1
ENST00000484332.1
CDS CAA 72 bp TTGGTTGTGCTTCATTGCACACTTGCTACTGCAGGCTaGCATCATGATTTGGGTCTGCCCACCAACTCCAAA +
Preference number: 6 (lower is better)
Translates to: LVVLHCTLATAG*HHDLGLPTNSK
Trigger: TTTGGAGTTGGTGGGCAGACCCAAATCATGATGCAAGCCTGCAGTAGCAAGTGTGCAATGAAGCACAACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475897.1
ENST00000484332.1
CDS CAA 90 bp GTTGTGCTTCATTGCACACTTGCTACTGCAGGCTTGCATCATGATTaGGGTCTGCCCACCAACTCCAAATATGCTCCATGTTTGGGCTTA +
Preference number: 6 (lower is better)
Translates to: VVLHCTLATAGLHHD*GLPTNSKYAPCLGL
Trigger: TAAGCCCAAACATGGAGCATATTTGGAGTTGGTGGGCAGACCCAAATCATGATGCAAGCCTGCAGTAGCAAGTGTGCAATGAAGCACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475897.1
ENST00000484332.1
CDS CAA 90 bp TCAGGGACGTGCCTTTGGATTTTAAGTCAGGGCTCTGGGGTGATGTaGCTGAAATTCCTGTTCGTAAGCAAGGTGAGGAGATATCCTGAT +
Preference number: 6 (lower is better)
Translates to: SGTCLWILSQGSGVM*LKFLFVSKVRRYPD
Trigger: ATCAGGATATCTCCTCACCTTGCTTACGAACAGGAATTTCAGCAACATCACCCCAGAGCCCTGACTTAAAATCCAAAGGCACGTCCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522345.2
CDS CAA 90 bp TCACAGAATTTGGTTGTGCTTCATTGCACACTTGCTACTGCAGGCTaGCATCATGATTTGGGTCTGCCCACCAACTCCAAATATGCTCCA +
Preference number: 6 (lower is better)
Translates to: SQNLVVLHCTLATAG*HHDLGLPTNSKYAP
Trigger: TGGAGCATATTTGGAGTTGGTGGGCAGACCCAAATCATGATGCAAGCCTGCAGTAGCAAGTGTGCAATGAAGCACAACCAAATTCTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475897.1
ENST00000484332.1
CDS CAA 90 bp TTGCTACCTTCCATTCACAGAATTTGGTTGTGCTTCATTGCACACTaGCTACTGCAGGCTTGCATCATGATTTGGGTCTGCCCACCAACT +
Preference number: 6 (lower is better)
Translates to: LLPSIHRIWLCFIAH*LLQACIMIWVCPPT
Trigger: AGTTGGTGGGCAGACCCAAATCATGATGCAAGCCTGCAGTAGCAAGTGTGCAATGAAGCACAACCAAATTCTGTGAATGGAAGGTAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475897.1
ENST00000484332.1
CDS CAA 90 bp CTGCTTTGGAGAGGCGTCTTGCTACCTTCCATTCACAGAATTTGGTaGTGCTTCATTGCACACTTGCTACTGCAGGCTTGCATCATGATT +
Preference number: 6 (lower is better)
Translates to: LLWRGVLLPSIHRIW*CFIAHLLLQACIMI
Trigger: AATCATGATGCAAGCCTGCAGTAGCAAGTGTGCAATGAAGCACAACCAAATTCTGTGAATGGAAGGTAGCAAGACGCCTCTCCAAAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475897.1
ENST00000484332.1
CDS GCA 72 bp ACACATCAAATCGTTTTCTTCTACCCTGGACAGCCCTaGGCTGGGTTAAGGAATGTGTCTTGCATGTCAAAG +
Preference number: 6 (lower is better)
Translates to: THQIVFFYPGQP*AGLRNVSCMSK
Trigger: CTTTGACATGCAAGACACATTCCTTAACCCAGCGCAGGGCTGTCCAGGGTAGAAGAAAACGATTTGATGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295900.10
ENST00000466529.1
ENST00000472569.1
ENST00000474112.5
ENST00000484332.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS CCA 72 bp TCGGCTAATAACACATCAAATCGTTTTCTTCTACCCTaGACAGCCCTGCGCTGGGTTAAGGAATGTGTCTTG +
Preference number: 6 (lower is better)
Translates to: SANNTSNRFLLP*TALRWVKECVL
Trigger: CAAGACACATTCCTTAACCCAGCGCAGGGCTGTCCAGGGTAGAAGAAAACGATTTGATGTGTTATTAGCCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295900.10
ENST00000466529.1
ENST00000472569.1
ENST00000474112.5
ENST00000484332.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS CCA 72 bp ATTGCACACTTGCTACTGCAGGCTTGCATCATGATTTaGGTCTGCCCACCAACTCCAAATATGCTCCATGTT +
Preference number: 6 (lower is better)
Translates to: IAHLLLQACIMI*VCPPTPNMLHV
Trigger: AACATGGAGCATATTTGGAGTTGGTGGGCAGACCCAAATCATGATGCAAGCCTGCAGTAGCAAGTGTGCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475897.1
ENST00000484332.1
CDS CAA 72 bp CTGGAAGAACGGTTGCTTCCACTTGCACTGCCTCCTTaGCTTTTGGACAGAGAAGGGAAGAAGGAAAATACT +
Preference number: 6 (lower is better)
Translates to: LEERLLPLALPP*LLDREGKKENT
Trigger: AGTATTTTCCTTCTTCCCTTCTCTGTCCAAAAGCAAAGGAGGCAGTGCAAGTGGAAGCAACCGTTCTTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000475897.1
ENST00000484332.1
ENST00000487717.5
ENST00000488239.1
ENST00000522345.2
ENST00000674280.1
CDS CAA 72 bp GAAAATACTGAAGTGGGAGGAACGGCCAAAGGCGGCTaGCTGGATGAGCTATGTCTTCTTTCACAAGTAAGA +
Preference number: 6 (lower is better)
Translates to: ENTEVGGTAKGG*LDELCLLSQVR
Trigger: TCTTACTTGTGAAAGAAGACATAGCTCATCCAGCAAGCCGCCTTTGGCCGTTCCTCCCACTTCAGTATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488239.1
CDS TCA 72 bp GGTGTGAGGTTTAGGTTTACTAGCTACAAAAGGCTTTaGTTCGGAAGGAATCACTCCGTGAGGGTTTTGGTG +
Preference number: 6 (lower is better)
Translates to: GVRFRFTSYKRL*FGRNHSVRVLV
Trigger: CACCAAAACCCTCACGGAGTGATTCCTTCCGAATCAAAGCCTTTTGTAGCTAGTAAACCTAAACCTCACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000295900.10
ENST00000466529.1
ENST00000472569.1
ENST00000474112.5
ENST00000484332.1
ENST00000484668.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS CCA 72 bp CAGGGCTTCTTGGTGTCGAGATCAATAACCCCACAGTaGATGTCAGGATCAAACTCTCTTTCTGATAATCTC +
Preference number: 6 (lower is better)
Translates to: QGFLVSRSITPQ*MSGSNSLSDNL
Trigger: GAGATTATCAGAAAGAGAGTTTGATCCTGACATCCACTGTGGGGTTATTGATCTCGACACCAAGAAGCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295900.10
ENST00000466529.1
ENST00000474112.5
ENST00000484332.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS CCA 72 bp CAGGGCTTCTTGGTGTCGAGATCAATAACCCCACAGTaGATGTCAGGATCAAACTCTCTTTCTGTCAAAAGA +
Preference number: 6 (lower is better)
Translates to: QGFLVSRSITPQ*MSGSNSLSVKR
Trigger: TCTTTTGACAGAAAGAGAGTTTGATCCTGACATCCACTGTGGGGTTATTGATCTCGACACCAAGAAGCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472569.1
CDS CCA 72 bp GGGCACAATCATTGCAAAGATTCACTTCTAGCCAACTaGCTAGAAGAGTTGCAGGCCTGGGTTTCTAACTTA +
Preference number: 6 (lower is better)
Translates to: GHNHCKDSLLAN*LEELQAWVSNL
Trigger: TAAGTTAGAAACCCAGGCCTGCAACTCTTCTAGCCAGTTGGCTAGAAGTGAATCTTTGCAATGATTGTGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643453.1
CDS CAA 72 bp TCCATTCACAGAATTTGGTTGTGCTTCATTGCACACTaGCTACTGCAGGCTTGCATCATGATTTGGGTCTGC +
Preference number: 6 (lower is better)
Translates to: SIHRIWLCFIAH*LLQACIMIWVC
Trigger: GCAGACCCAAATCATGATGCAAGCCTGCAGTAGCAAGTGTGCAATGAAGCACAACCAAATTCTGTGAATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475897.1
ENST00000484332.1
CDS CAA 72 bp TGCAAAGATTCACTTCTAGCCAACTGGCTAGAAGAGTaGCAGGCCTGGGTTTCTAACTTAGAGAAAAGGCTC +
Preference number: 6 (lower is better)
Translates to: CKDSLLANWLEE*QAWVSNLEKRL
Trigger: GAGCCTTTTCTCTAAGTTAGAAACCCAGGCCTGCAACTCTTCTAGCCAGTTGGCTAGAAGTGAATCTTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643453.1
CDS CCA 72 bp TATTATTGGAATTGTCTTCAGGTTTCTTTTCCAGAGTaGGCGGTGCAGGAAGCCCTTTGCCATTCAGAATCT +
Preference number: 6 (lower is better)
Translates to: YYWNCLQVSFPE*AVQEALCHSES
Trigger: AGATTCTGAATGGCAAAGGGCTTCCTGCACCGCCCACTCTGGAAAAGAAACCTGAAGACAATTCCAATAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295900.10
ENST00000466529.1
ENST00000474112.5
ENST00000484332.1
ENST00000487717.5
ENST00000488239.1
ENST00000522345.2
ENST00000674280.1
CDS CAA 90 bp TTGTTCTTAGCTTTCAAATGCCTTCACTACTACTGGGCACAATCATaGCAAAGATTCACTTCTAGCCAACTGGCTAGAAGAGTTGCAGGC +
Preference number: 6 (lower is better)
Translates to: LFLAFKCLHYYWAQS*QRFTSSQLARRVAG
Trigger: GCCTGCAACTCTTCTAGCCAGTTGGCTAGAAGTGAATCTTTGCAATGATTGTGCCCAGTAGTAGTGAAGGCATTTGAAAGCTAAGAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643453.1
CDS TCA 72 bp TCCGCTCCTTTTCTTTGGAGGGTAGGCCAAAAATCCTaGTCAATTTACCAATGGATCTTCATCTGCTGCAAT +
Preference number: 6 (lower is better)
Translates to: SAPFLWRVGQKS*SIYQWIFICCN
Trigger: ATTGCAGCAGATGAAGATCCATTGGTAAATTGATCAGGATTTTTGGCCTACCCTCCAAAGAAAAGGAGCGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000474513.6
ENST00000674280.1
CDS TCA 72 bp ACCGCAGATTTCAGTAGTGTGCCATCCATTTTCGGATaGATCTTTTCCACTTTCACAGAGGGTGTCATGATT +
Preference number: 6 (lower is better)
Translates to: TADFSSVPSIFG*IFSTFTEGVMI
Trigger: AATCATGACACCCTCTGTGAAAGTGGAAAAGATTCATCCGAAAATGGATGGCACACTACTGAAATCTGCGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000484332.1
ENST00000487717.5
ENST00000488239.1
ENST00000522345.2
ENST00000674280.1
CDS TCA 72 bp AAAGGCTGCACGCTACTAAAGTCTCCATTGACTGAGTaGCACCAGGAACAGTCAGCTATAGATTTTGTTCTT +
Preference number: 6 (lower is better)
Translates to: KGCTLLKSPLTE*HQEQSAIDFVL
Trigger: AAGAACAAAATCTATAGCTGACTGTTCCTGGTGTCACTCAGTCAATGGAGACTTTAGTAGCGTGCAGCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643453.1
CDS TCA 72 bp AGCAACATAGATGAACCTGGAGGATATTATGTTAAGTaGAATCAGCCAGGCCCAGAAAGACAAACAGCACAC +
Preference number: 6 (lower is better)
Translates to: SNIDEPGGYYVK*NQPGPERQTAH
Trigger: GTGTGCTGTTTGTCTTTCTGGGCCTGGCTGATTTCACTTAACATAATATCCTCCAGGTTCATCTATGTTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643464.1
CDS GCA 72 bp CTTTCAAATGCCTTCACTACTACTGGGCACAATCATTaGAAAGATTCACTTCTAGCCAACTGGCTAGAAGAG +
Preference number: 6 (lower is better)
Translates to: LSNAFTTTGHNH*KDSLLANWLEE
Trigger: CTCTTCTAGCCAGTTGGCTAGAAGTGAATCTTTGCAATGATTGTGCCCAGTAGTAGTGAAGGCATTTGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643453.1
CDS CCA 72 bp TGGGTCTGCCCACCAACTCCAAATATGCTCCATGTTTaGGCTTATGTAACATTTGCTACTACTGTAAAAAGC +
Preference number: 6 (lower is better)
Translates to: WVCPPTPNMLHV*AYVTFATTVKS
Trigger: GCTTTTTACAGTAGTAGCAAATGTTACATAAGCCCAAACATGGAGCATATTTGGAGTTGGTGGGCAGACCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484332.1
CDS CAA 72 bp GCTTTCAAATGCCTTCACTACTACTGGGCACAATCATaGCAAAGATTCACTTCTAGCCAACTGGCTAGAAGA +
Preference number: 6 (lower is better)
Translates to: AFKCLHYYWAQS*QRFTSSQLARR
Trigger: TCTTCTAGCCAGTTGGCTAGAAGTGAATCTTTGCAATGATTGTGCCCAGTAGTAGTGAAGGCATTTGAAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643453.1
CDS CAA 90 bp CACAATCATTGCAAAGATTCACTTCTAGCCAACTGGCTAGAAGAGTaGCAGGCCTGGGTTTCTAACTTAGAGAAAAGGCTCTTATGTTTG +
Preference number: 6 (lower is better)
Translates to: HNHCKDSLLANWLEE*QAWVSNLEKRLLCL
Trigger: CAAACATAAGAGCCTTTTCTCTAAGTTAGAAACCCAGGCCTGCAACTCTTCTAGCCAGTTGGCTAGAAGTGAATCTTTGCAATGATTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643453.1
CDS TCA 72 bp GTCTTCTTTCATAATGTGATTGAAATGCCTGCGGTTTaGCAACCTGATTACAGTCGTTACACACCACCAAGT +
Preference number: 6 (lower is better)
Translates to: VFFHNVIEMPAV*QPDYSRYTPPS
Trigger: ACTTGGTGGTGTGTAACGACTGTAATCAGGTTGTCAAACCGCAGGCATTTCAATCACATTATGAAAGAAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS TCA 72 bp AGCTCCTCTTTTCTTTGGAGGGTAGGCCAAAAATCCTaGTCAATTTACCAATGGATCTTCATCTGCTGCAAT +
Preference number: 6 (lower is better)
Translates to: SSSFLWRVGQKS*SIYQWIFICCN
Trigger: ATTGCAGCAGATGAAGATCCATTGGTAAATTGATCAGGATTTTTGGCCTACCCTCCAAAGAAAAGAGGAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000647117.1
ENST00000674254.1
CDS TCA 72 bp CCAAGTTTATCCTACACAACTTCTTCATCCCGGATATaGAGATGCAAGATCTACTTGGGGGACAGGAAAATT +
Preference number: 6 (lower is better)
Translates to: PSLSYTTSSSRI*RCKIYLGDRKI
Trigger: AATTTTCCTGTCCCCCAAGTAGATCTTGCATCTTCATATCCGGGATGAAGAAGTTGTGTAGGATAAACTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650280.1
CDS CAA 72 bp TTGGGTCTGCCCACCAACTCCAAATATGCTCCATGTTaGGGCTTATGTAACATTTGCTACTACTGTAAAAAG +
Preference number: 6 (lower is better)
Translates to: LGLPTNSKYAPC*GLCNICYYCKK
Trigger: CTTTTTACAGTAGTAGCAAATGTTACATAAGCCCAAACATGGAGCATATTTGGAGTTGGTGGGCAGACCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484332.1
CDS CAA 90 bp CATCATGATTTGGGTCTGCCCACCAACTCCAAATATGCTCCATGTTaGGGCTTATGTAACATTTGCTACTACTGTAAAAAGCACTTGAAT +
Preference number: 6 (lower is better)
Translates to: HHDLGLPTNSKYAPC*GLCNICYYCKKHLN
Trigger: ATTCAAGTGCTTTTTACAGTAGTAGCAAATGTTACATAAGCCCAAACATGGAGCATATTTGGAGTTGGTGGGCAGACCCAAATCATGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484332.1
CDS TCA 72 bp AAATGTGCAAAAAGATGCTGGCTGAGGATGATGACCTaGATAATGACAGTCCAGTTTTTCAACAGACTCTTC +
Preference number: 6 (lower is better)
Translates to: KCAKRCWLRMMT*IMTVQFFNRLF
Trigger: GAAGAGTCTGTTGAAAAACTGGACTGTCATTATTCAGGTCATCATCCTCAGCCAGCATCTTTTTGCACATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000484332.1
ENST00000484668.1
ENST00000487717.5
ENST00000522345.2
ENST00000674280.1
CDS TCA 72 bp GTATGGCTGAATAAAATAACAAACCTGGGTTCAAAATaGGACACGATCCTGGTGCTAATCGTATCTATCCCA +
Preference number: 6 (lower is better)
Translates to: VWLNKITNLGSK*DTILVLIVSIP
Trigger: TGGGATAGATACGATTAGCACCAGGATCGTGTCTCATTTTGAACCCAGGTTTGTTATTTTATTCAGCCATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650280.1
CDS GCA 72 bp TTGCATGTGAGCAGTTATCACAATGGTTATTCATCTTaGAAATTAATTCCTTCACACCAAGCACCCATCACG +
Preference number: 6 (lower is better)
Translates to: LHVSSYHNGYSS*KLIPSHQAPIT
Trigger: CGTGATGGGTGCTTGGTGTGAAGGAATTAATTTGCAAGATGAATAACCATTGTGATAACTGCTCACATGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646942.1
CDS TCA 72 bp ATCAATTTACCAATGGATCTTCATCTGCTGCAATTGTaGAAGCTCGTTCGTCTTAATTCTGTTCAGATCTGG +
Preference number: 6 (lower is better)
Translates to: INLPMDLHLLQL*KLVRLNSVQIW
Trigger: CCAGATCTGAACAGAATTAAGACGAACGAGCTTTCACAATTGCAGCAGATGAAGATCCATTGGTAAATTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295900.10
ENST00000474112.5
ENST00000647117.1
ENST00000674280.1
CDS TCA 72 bp ATCAATTTACCAATGGATCTTCATCTGCTGCAATTGTaGAAGCTCGTTCGTCTTAATTCTGTTCAGATCCCA +
Preference number: 6 (lower is better)
Translates to: INLPMDLHLLQL*KLVRLNSVQIP
Trigger: TGGGATCTGAACAGAATTAAGACGAACGAGCTTTCACAATTGCAGCAGATGAAGATCCATTGGTAAATTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674254.1
CDS TCA 72 bp ATCAATTTACCAATGGATCTTCATCTGCTGCAATTGTaGAAGCTCGTTCGTCTTAATTCTGTTCAGATCTGT +
Preference number: 6 (lower is better)
Translates to: INLPMDLHLLQL*KLVRLNSVQIC
Trigger: ACAGATCTGAACAGAATTAAGACGAACGAGCTTTCACAATTGCAGCAGATGAAGATCCATTGGTAAATTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474513.6
ENST00000646942.1
CDS CAA 72 bp GGCTTATGTAACATTTGCTACTACTGTAAAAAGCACTaGAATTACAAAGGTCCTGGCAGATCAACAGAAAAC +
Preference number: 6 (lower is better)
Translates to: GLCNICYYCKKH*NYKGPGRSTEN
Trigger: GTTTTCTGTTGATCTGCCAGGACCTTTGTAATTCAAGTGCTTTTTACAGTAGTAGCAAATGTTACATAAGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484332.1
CDS TCA 72 bp ACACTCAAAAGAACTGAAAGCAGAGACTCAGATACCTaGGCACTAATATTCATTAGCAGTGTAATTCCTAAA +
Preference number: 6 (lower is better)
Translates to: TLKRTESRDSDT*ALIFISSVIPK
Trigger: TTTAGGAATTACACTGCTAATGAATATTAGTGCTCAGGTATCTGAGTCTCTGCTTTCAGTTCTTTTGAGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647117.1
ENST00000674254.1
CDS TCA 72 bp ATCAATTTACCAATGGATCTTCATCTGCTGCAATTGTaGAAGCTCGTTCGTCTTAATTCTGTTCAGATAAGT +
Preference number: 6 (lower is better)
Translates to: INLPMDLHLLQL*KLVRLNSVQIS
Trigger: ACTTATCTGAACAGAATTAAGACGAACGAGCTTTCACAATTGCAGCAGATGAAGATCCATTGGTAAATTGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643464.1
CDS GCA 72 bp TCCAAATATGCTCCATGTTTGGGCTTATGTAACATTTaGTACTACTGTAAAAAGCACTTGAATTACAAAGGT +
Preference number: 6 (lower is better)
Translates to: SKYAPCLGLCNI*YYCKKHLNYKG
Trigger: ACCTTTGTAATTCAAGTGCTTTTTACAGTAGTAGCAAATGTTACATAAGCCCAAACATGGAGCATATTTGGA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484332.1