Pregenerated sensors for ATP6V0E1 (Homo sapiens)
Ensembl gene IDs: ENSG00000113732Ensembl transcript IDs: ENST00000517669.1, ENST00000519374.6
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATTAAGAAACGCACTTACCAGTCTTTTCAGGCATCTCAAGCTACATaGCAGGGTTTATATACTCAACCTAAGTTTAGACTACAAAATCAT | + |
|
Preference number: 1 (lower is better) Translates to: IKKRTYQSFQASQAT*QGLYTQPKFRLQNH Trigger: ATGATTTTGTAGTCTAAACTTAGGTTGAGTATATAAACCCTGCCATGTAGCTTGAGATGCCTGAAAAGACTGGTAAGTGCGTTTCTTAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000519374.6 |
||
| 3UTR-3UTR TCA 90 bp | GTTCTGCAGCTGGCAGGTAACCTTGAACTGCTCACCATGGTACCATCTTTAAGGAAATTTACACATCTTTaGTCCCTCCAGTGCCTTGGC | + |
|
Preference number: 2 (lower is better) Translates to: VLQLAGNLELLTMVPSLRKFTHL*SLQCLG Trigger: GCCAAGGCACTGGAGGGATCAAAGATGTGTAAATTT...CCTTAAAGATGGTACCATGGTGAGCAGTTCAAGGTTACCTGCCAGCTGCAGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000519374.6 |
||
| 3UTR-3UTR CCA 90 bp | GTTCTGCAGCTGGCAGGTAACCTTGAACTGCTCACCATGGTACCATCTTTAAGGGCATCTCAAGCTACATaGCAGGGTTTATATACTCAA | + |
|
Preference number: 2 (lower is better) Translates to: VLQLAGNLELLTMVPSLRASQAT*QGLYTQ Trigger: TTGAGTATATAAACCCTGCCATGTAGCTTGAGATGC...CCTTAAAGATGGTACCATGGTGAGCAGTTCAAGGTTACCTGCCAGCTGCAGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000519374.6 |
||
| 3UTR-3UTR GCA 90 bp | CTGGCAGGTAACCTTGAACTGCTCACCATGGTACCATCTTTAAGGACAATGCTCGAAAGTATAGTTTGGTaGGATTCTGTTGAGATGGCT | + |
|
Preference number: 2 (lower is better) Translates to: LAGNLELLTMVPSLRTMLESIVW*DSVEMA Trigger: AGCCATCTCAACAGAATCGCACCAAACTATACTTTC...GAGCATTGTCCTTAAAGATGGTACCATGGTGAGCAGTTCAAGGTTACCTGCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000519374.6 |
||
| 3UTR-3UTR CCA 90 bp | CTGGCAGGTAACCTTGAACTGCTCACCATGGTACCATCTTTAAGGACAATGCTCCCTGAAAGTATAGTTTaGTGCGATTCTGTTGAGATG | + |
|
Preference number: 2 (lower is better) Translates to: LAGNLELLTMVPSLRTMLPESIV*CDSVEM Trigger: CATCTCAACAGAATCGCACCAAACTATACTTTCAGG...GAGCATTGTCCTTAAAGATGGTACCATGGTGAGCAGTTCAAGGTTACCTGCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000519374.6 |
||
| 3UTR-3UTR GCA 90 bp | ATCGTGTTTGCATTCAGCAGCTTGCCCTTGCCACGTGTTAAAATGGCCATAAAAAAGGCAAACTCTGACTaGCTGACCATACTGATAAGA | + |
|
Preference number: 2 (lower is better) Translates to: IVFAFSSLPLPRVKMAIKKANSD*LTILIR Trigger: TCTTATCAGTATGGTCAGGCAGTCAGAGTTTGCCTT...TTTTATGGCCATTTTAACACGTGGCAAGGGCAAGCTGCTGAATGCAAACACGAT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000517669.1 |
||
| 3UTR-3UTR CCA 90 bp | GTTACTGAACGATTAAGAAACGCACTTACCAGTCTTTTCAGGCATCTCAAGCTAGCACAGTTCAGGTTATaGAGGCACGTAATTCACCAA | + |
|
Preference number: 2 (lower is better) Translates to: VTERLRNALTSLFRHLKLAQFRL*RHVIHQ Trigger: TTGGTGAATTACGTGCCTCCATAACCTGAACTGTGC...TAGCTTGAGATGCCTGAAAAGACTGGTAAGTGCGTTTCTTAATCGTTCAGTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000519374.6 |
||
| 3UTR-3UTR TCA 90 bp | ATGGTACCATCTTTAAGGACAATGCTCCAACACAACCTTATATTACAGTTCTATAGAAGAAATTCATCCTaGAAGTATAGTTTGGTGCGA | + |
|
Preference number: 2 (lower is better) Translates to: MVPSLRTMLQHNLILQFYRRNSS*KYSLVR Trigger: TCGCACCAAACTATACTTTCAGGATGAATTTCTTCT...ATAGAACTGTAATATAAGGTTGTGTTGGAGCATTGTCCTTAAAGATGGTACCAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000519374.6 |
||
| 3UTR TCA 72 bp | CAGTGCCTTGGCTGCAGTAGGCACTCAAATAGTTACTaGACGATTAAGAAACGCACTTACCAGTCTTTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: QCLGCSRHSNSY*TIKKRTYQSFQ Trigger: CTGAAAAGACTGGTAAGTGCGTTTCTTAATCGTTCAGTAACTATTTGAGTGCCTACTGCAGCCAAGGCACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000519374.6 |
||
| 3UTR TCA 72 bp | AAAGCTCTCAAATTAGTGTATCGAGATGCCTGCTACTaGAATACAAAATTACTGTCTCCTGCCCCTGGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: KALKLVYRDACY*NTKLLSPAPGF Trigger: AAAGCCAGGGGCAGGAGACAGTAATTTTGTATTTCAGTAGCAGGCATCTCGATACACTAATTTGAGAGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000519374.6 |
||
| 3UTR CCA 72 bp | CGCACTTACCAGTCTTTTCAGGCATCTCAAGCTACATaGCAGGGTTTATATACTCAACCTAAGTTTAGACTA | + |
|
Preference number: 3 (lower is better) Translates to: RTYQSFQASQAT*QGLYTQPKFRL Trigger: TAGTCTAAACTTAGGTTGAGTATATAAACCCTGCCATGTAGCTTGAGATGCCTGAAAAGACTGGTAAGTGCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000519374.6 |
||
| 3UTR-3UTR CAA 90 bp | CATGGTACCATCTTTAAGGACAATGCTCCAACACAACCTTATATTACAGTTCTACAAATTTACACATCTTaGATCCCTCCAGTGCCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: HGTIFKDNAPTQPYITVLQIYTS*IPPVPW Trigger: CCAAGGCACTGGAGGGATCAAAGATGTGTAAATTTG...TAGAACTGTAATATAAGGTTGTGTTGGAGCATTGTCCTTAAAGATGGTACCATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000519374.6 |
||
| CDS-3UTR TCA 90 bp | ATTTCTGCTCTTCAGATCGTGTTTGCATTCAGCAGCTTGCCCTTGCCACGTGTTGGCACAGTGAGGCCGTaGTACGCCATGGTCGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: ISALQIVFAFSSLPLPRVGTVRP*YAMVAA Trigger: GGCGGCGACCATGGCGTATCACGGCCTCACTGTGCC...AACACGTGGCAAGGGCAAGCTGCTGAATGCAAACACGATCTGAAGAGCAGAAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517669.1 |
||
| CDS-3UTR TCA 90 bp | GTTACTGAACGATTAAGAAACGCACTTACCAGTCTTTTCAGGCATCTCAAGCTAGCCATGGTCGCCGCCTaGGCGCCAACCCCTACCCCG | + |
|
Preference number: 4 (lower is better) Translates to: VTERLRNALTSLFRHLKLAMVAA*APTPTP Trigger: CGGGGTAGGGGTTGGCGCTCAGGCGGCGACCATGGC...TAGCTTGAGATGCCTGAAAAGACTGGTAAGTGCGTTTCTTAATCGTTCAGTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000519374.6 |
||
| CDS-3UTR CCA 90 bp | ATCGTGTTTGCATTCAGCAGCTTGCCCTTGCCACGTGTTAAAATGGCCATAAAAGGCCGTGATACGCCATaGTCGCCGCCTGAGCGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: IVFAFSSLPLPRVKMAIKGRDTP*SPPERQ Trigger: TTGGCGCTCAGGCGGCGACCATGGCGTATCACGGCC...TTTTATGGCCATTTTAACACGTGGCAAGGGCAAGCTGCTGAATGCAAACACGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517669.1 |
||
| CDS-3UTR CCA 90 bp | CTGGCAGGTAACCTTGAACTGCTCACCATGGTACCATCTTTAAGGACAATGCTCGCCTTGTTCTGCAGCTaGCAGGTAACCTTGAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: LAGNLELLTMVPSLRTMLALFCS*QVTLNC Trigger: GCAGTTCAAGGTTACCTGCCAGCTGCAGAACAAGGC...GAGCATTGTCCTTAAAGATGGTACCATGGTGAGCAGTTCAAGGTTACCTGCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000519374.6 |
||
| CDS-3UTR TCA 90 bp | ATGGTACCATCTTTAAGGACAATGCTCCAACACAACCTTATATTACAGTTCTATGGCACAGTGAGGCCGTaGTACGCCATGGTCGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: MVPSLRTMLQHNLILQFYGTVRP*YAMVAA Trigger: GGCGGCGACCATGGCGTATCACGGCCTCACTGTGCC...ATAGAACTGTAATATAAGGTTGTGTTGGAGCATTGTCCTTAAAGATGGTACCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000519374.6 |
||
| CDS-3UTR CCA 90 bp | CATGGTACCATCTTTAAGGACAATGCTCCAACACAACCTTATATTACAGTTCTAGGCCGTGATACGCCATaGTCGCCGCCTGAGCGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: HGTIFKDNAPTQPYITVLGRDTP*SPPERQ Trigger: TTGGCGCTCAGGCGGCGACCATGGCGTATCACGGCC...TAGAACTGTAATATAAGGTTGTGTTGGAGCATTGTCCTTAAAGATGGTACCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000519374.6 |
||
| CDS-3UTR GCA 90 bp | ATCGTGTTTGCATTCAGCAGCTTGCCCTTGCCACGTGTTAAAATGGCCATAAAATCAGCAGCTTGCCCTTaGCACGTGTTAAAATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: IVFAFSSLPLPRVKMAIKSAACP*HVLKWP Trigger: TGGCCATTTTAACACGTGGCAAGGGCAAGCTGCTGA...TTTTATGGCCATTTTAACACGTGGCAAGGGCAAGCTGCTGAATGCAAACACGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000517669.1 |
||
| CDS-3UTR GCA 90 bp | ATTTCTGCTCTTCAGATCGTGTTTGCATTCAGCAGCTTGCCCTTGCCACGTGTTTCTTCAGATCGTGTTTaGATTCAGCAGCTTGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ISALQIVFAFSSLPLPRVSSDRV*IQQLAL Trigger: AAGGGCAAGCTGCTGAATGCAAACACGATCTGAAGA...AACACGTGGCAAGGGCAAGCTGCTGAATGCAAACACGATCTGAAGAGCAGAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517669.1 |
||
| CDS-3UTR TCA 90 bp | GTTACTGAACGATTAAGAAACGCACTTACCAGTCTTTTCAGGCATCTCAAGCTACTATGTCTGAGGCTGTaGTGGTTCCATCTCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VTERLRNALTSLFRHLKLLCLRL*WFHLRS Trigger: GCTCCTGAGATGGAACCATCACAGCCTCAGACATAG...TAGCTTGAGATGCCTGAAAAGACTGGTAAGTGCGTTTCTTAATCGTTCAGTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000519374.6 |
||
| CDS-3UTR GCA 90 bp | GTTCTGCAGCTGGCAGGTAACCTTGAACTGCTCACCATGGTACCATCTTTAAGGAAAATTACTGTCTCCTaGCCCTGGCTTTTTAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: VLQLAGNLELLTMVPSLRKITVS*PWLFNH Trigger: GTGATTAAAAAGCCAGGGGCAGGAGACAGTAATTTT...CCTTAAAGATGGTACCATGGTGAGCAGTTCAAGGTTACCTGCCAGCTGCAGAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000519374.6 |
||
| CDS-3UTR CCA 90 bp | GTTCTGCAGCTGGCAGGTAACCTTGAACTGCTCACCATGGTACCATCTTTAAGGCCTGAAAGTATAGTTTaGTGCGATTCTGTTGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: VLQLAGNLELLTMVPSLRPESIV*CDSVEM Trigger: CATCTCAACAGAATCGCACCAAACTATACTTTCAGG...CCTTAAAGATGGTACCATGGTGAGCAGTTCAAGGTTACCTGCCAGCTGCAGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000519374.6 |
||
| CDS-3UTR TCA 90 bp | TATAAAAATGAACTTTACAAACACCGAGCCCAGATTTCCATAGAAAGGAGGAAAGGAAGTGTCAATAGCTaGCCGCGTGACCAGCGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: YKNELYKHRAQISIERRKGSVNS*PRDQRV Trigger: CACACGCTGGTCACGCGGTCAGCTATTGACACTTCC...TTTCCTCCTTTCTATGGAAATCTGGGCTCGGTGTTTGTAAAGTTCATTTTTATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000519374.6 |
||
| CDS-3UTR TCA 90 bp | CTGGCAGGTAACCTTGAACTGCTCACCATGGTACCATCTTTAAGGACAATGCTCCGAGATGCCTGCTACTaGAATACAAAATTACTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LAGNLELLTMVPSLRTMLRDACY*NTKLLS Trigger: AGACAGTAATTTTGTATTTCAGTAGCAGGCATCTCG...GAGCATTGTCCTTAAAGATGGTACCATGGTGAGCAGTTCAAGGTTACCTGCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000519374.6 |
||
| CDS-3UTR GCA 90 bp | GTTACTGAACGATTAAGAAACGCACTTACCAGTCTTTTCAGGCATCTCAAGCTATTTGCTGCCTTGTTCTaGAGCTGGCAGGTAACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VTERLRNALTSLFRHLKLFAALF*SWQVTL Trigger: CAAGGTTACCTGCCAGCTGCAGAACAAGGCAGCAAA...TAGCTTGAGATGCCTGAAAAGACTGGTAAGTGCGTTTCTTAATCGTTCAGTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000519374.6 |
||
| CDS-3UTR GCA 90 bp | GTTACTGAACGATTAAGAAACGCACTTACCAGTCTTTTCAGGCATCTCAAGCTACATCTCAGGAGCATTTaGTGCCTTGTTCTGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VTERLRNALTSLFRHLKLHLRSI*CLVLQL Trigger: CAGCTGCAGAACAAGGCAGCAAATGCTCCTGAGATG...TAGCTTGAGATGCCTGAAAAGACTGGTAAGTGCGTTTCTTAATCGTTCAGTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000519374.6 |
||
| CDS-3UTR GCA 90 bp | GTGTTTGCATTCAGCAGCTTGCCCTTGCCACGTGTTAAAATGGCCATAAAATGTTTGCATTCAGCAGCTTaGCCTTGCCACGTGTTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: VFAFSSLPLPRVKMAIKCLHSAA*PCHVLK Trigger: TTTTAACACGTGGCAAGGGCAAGCTGCTGAATGCAA...ACATTTTATGGCCATTTTAACACGTGGCAAGGGCAAGCTGCTGAATGCAAACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517669.1 |
||
| CDS-3UTR CCA 90 bp | CTGGCAGGTAACCTTGAACTGCTCACCATGGTACCATCTTTAAGGACAATGCTCGCATCTCAAGCTACATaGCAGGGTTTATATACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LAGNLELLTMVPSLRTMLASQAT*QGLYTQ Trigger: TTGAGTATATAAACCCTGCCATGTAGCTTGAGATGC...GAGCATTGTCCTTAAAGATGGTACCATGGTGAGCAGTTCAAGGTTACCTGCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000519374.6 |
||
| 3UTR CAA 72 bp | GCTCTTCAGATCGTGTTTGCATTCAGCAGCTTGCCCTaGCCACGTGTTAAAATGGCCATAAAATGTGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: ALQIVFAFSSLP*PRVKMAIKCEK Trigger: TTTCTCACATTTTATGGCCATTTTAACACGTGGCAAGGGCAAGCTGCTGAATGCAAACACGATCTGAAGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517669.1 |
||
| CDS-3UTR GCA 90 bp | GTGTTTGCATTCAGCAGCTTGCCCTTGCCACGTGTTAAAATGGCCATAAAATGTAAGGCAAACTCTGACTaGCTGACCATACTGATAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VFAFSSLPLPRVKMAIKCKANSD*LTILIR Trigger: TCTTATCAGTATGGTCAGGCAGTCAGAGTTTGCCTT...ACATTTTATGGCCATTTTAACACGTGGCAAGGGCAAGCTGCTGAATGCAAACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517669.1 |
||
| 3UTR CAA 72 bp | ATTTCTGCTCTTCAGATCGTGTTTGCATTCAGCAGCTaGCCCTTGCCACGTGTTAAAATGGCCATAAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: ISALQIVFAFSS*PLPRVKMAIKC Trigger: ACATTTTATGGCCATTTTAACACGTGGCAAGGGCAAGCTGCTGAATGCAAACACGATCTGAAGAGCAGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517669.1 |
||
| CDS-3UTR GCA 90 bp | CATGGTACCATCTTTAAGGACAATGCTCCAACACAACCTTATATTACAGTTCTACAGGTAACCTTGAACTaGTCACCATGGTACCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: HGTIFKDNAPTQPYITVLQVTLN*SPWYHL Trigger: AAGATGGTACCATGGTGAGCAGTTCAAGGTTACCTG...TAGAACTGTAATATAAGGTTGTGTTGGAGCATTGTCCTTAAAGATGGTACCATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000519374.6 |
||
| CDS-3UTR CCA 90 bp | CATGGTACCATCTTTAAGGACAATGCTCCAACACAACCTTATATTACAGTTCTAGCACAGTTCAGGTTATaGAGGCACGTAATTCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: HGTIFKDNAPTQPYITVLAQFRL*RHVIHQ Trigger: TTGGTGAATTACGTGCCTCCATAACCTGAACTGTGC...TAGAACTGTAATATAAGGTTGTGTTGGAGCATTGTCCTTAAAGATGGTACCATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000519374.6 |
||
| CDS-3UTR TCA 90 bp | GTTACTGAACGATTAAGAAACGCACTTACCAGTCTTTTCAGGCATCTCAAGCTAAGAAGAAATTCATCCTaGAAGTATAGTTTGGTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: VTERLRNALTSLFRHLKLRRNSS*KYSLVR Trigger: TCGCACCAAACTATACTTTCAGGATGAATTTCTTCT...TAGCTTGAGATGCCTGAAAAGACTGGTAAGTGCGTTTCTTAATCGTTCAGTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000519374.6 |
||
| CDS-3UTR GCA 90 bp | GAAAAAGTCAAGGCAAACTCTGACTGCCTGACCATACTGATAAGAAAGGTCACATTCCAATTTTATTTCTaGTCTTCAGATCGTGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: EKVKANSDCLTILIRKVTFQFYF*SSDRVC Trigger: GCAAACACGATCTGAAGAGCAGAAATAAAATTGGAA...TGTGACCTTTCTTATCAGTATGGTCAGGCAGTCAGAGTTTGCCTTGACTTTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517669.1 |
||
| CDS-3UTR GCA 90 bp | CATGGTACCATCTTTAAGGACAATGCTCCAACACAACCTTATATTACAGTTCTAGAAAGTATAGTTTGGTaGGATTCTGTTGAGATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HGTIFKDNAPTQPYITVLESIVW*DSVEMA Trigger: AGCCATCTCAACAGAATCGCACCAAACTATACTTTC...TAGAACTGTAATATAAGGTTGTGTTGGAGCATTGTCCTTAAAGATGGTACCATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000519374.6 |
||
| CDS-3UTR GCA 90 bp | GTTACTGAACGATTAAGAAACGCACTTACCAGTCTTTTCAGGCATCTCAAGCTAATTAGTGTATCGAGATaGCTGCTACTGAAATACAAA | + |
|
Preference number: 4 (lower is better) Translates to: VTERLRNALTSLFRHLKLISVSR*LLLKYK Trigger: TTTGTATTTCAGTAGCAGGCATCTCGATACACTAAT...TAGCTTGAGATGCCTGAAAAGACTGGTAAGTGCGTTTCTTAATCGTTCAGTAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000519374.6 |
||
| CDS-3UTR CAA 90 bp | ATTTCTGCTCTTCAGATCGTGTTTGCATTCAGCAGCTTGCCCTTGCCACGTGTTTTCAGCAGCTTGCCCTaGCCACGTGTTAAAATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ISALQIVFAFSSLPLPRVFSSLP*PRVKMA Trigger: GGCCATTTTAACACGTGGCAAGGGCAAGCTGCTGAA...AACACGTGGCAAGGGCAAGCTGCTGAATGCAAACACGATCTGAAGAGCAGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517669.1 |
||
| CDS-3UTR CAA 90 bp | GTTACTGAACGATTAAGAAACGCACTTACCAGTCTTTTCAGGCATCTCAAGCTAGATCCCTCCAGTGCCTaGGCTGCAGTAGGCACTCAA | + |
|
Preference number: 5 (lower is better) Translates to: VTERLRNALTSLFRHLKLDPSSA*AAVGTQ Trigger: TTGAGTGCCTACTGCAGCCAAGGCACTGGAGGGATC...TAGCTTGAGATGCCTGAAAAGACTGGTAAGTGCGTTTCTTAATCGTTCAGTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000519374.6 |
||
| CDS-3UTR CAA 90 bp | GTGTTTGCATTCAGCAGCTTGCCCTTGCCACGTGTTAAAATGGCCATAAAATGTCTCTTCAGATCGTGTTaGCATTCAGCAGCTTGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: VFAFSSLPLPRVKMAIKCLFRSC*HSAACP Trigger: AGGGCAAGCTGCTGAATGCAAACACGATCTGAAGAG...ACATTTTATGGCCATTTTAACACGTGGCAAGGGCAAGCTGCTGAATGCAAACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517669.1 |
||
| CDS-3UTR CAA 90 bp | GTGTTTGCATTCAGCAGCTTGCCCTTGCCACGTGTTAAAATGGCCATAAAATGTTTTGCATTCAGCAGCTaGCCCTTGCCACGTGTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: VFAFSSLPLPRVKMAIKCFAFSS*PLPRVK Trigger: TTTAACACGTGGCAAGGGCAAGCTGCTGAATGCAAA...ACATTTTATGGCCATTTTAACACGTGGCAAGGGCAAGCTGCTGAATGCAAACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000517669.1 |
||
| CDS-3UTR CAA 90 bp | ATGGTACCATCTTTAAGGACAATGCTCCAACACAACCTTATATTACAGTTCTATAGCTGGCAGGTAACCTaGAACTGCTCACCATGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: MVPSLRTMLQHNLILQFYSWQVT*NCSPWY Trigger: GTACCATGGTGAGCAGTTCAAGGTTACCTGCCAGCT...ATAGAACTGTAATATAAGGTTGTGTTGGAGCATTGTCCTTAAAGATGGTACCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000519374.6 |
||
| CDS-3UTR CAA 90 bp | TATAAAAATGAACTTTACAAACACCGAGCCCAGATTTCCATAGAAAGGAGGAAACAAATTTACACATCTTaGATCCCTCCAGTGCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: YKNELYKHRAQISIERRKQIYTS*IPPVPW Trigger: CCAAGGCACTGGAGGGATCAAAGATGTGTAAATTTG...TTTCCTCCTTTCTATGGAAATCTGGGCTCGGTGTTTGTAAAGTTCATTTTTATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000519374.6 |
||